# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Bac_DnaA PF00308.18 gi|121635884|ref|YP_976107.1| - 1.2e-103 345.7 0.1 2.5e-103 344.6 0.0 1.6 2 0 0 2 2 2 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 gi|121635884|ref|YP_976107.1| - 4e-27 94.0 0.0 8.4e-27 93.0 0.0 1.6 1 0 0 1 1 1 1 Bacterial dnaA protein helix-turn-helix IstB_IS21 PF01695.17 gi|121635884|ref|YP_976107.1| - 5.4e-10 39.3 0.0 1.1e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|121635884|ref|YP_976107.1| - 8.5e-06 26.2 0.0 0.00023 21.6 0.0 3.2 4 1 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|121635884|ref|YP_976107.1| - 0.0011 19.2 0.3 1.4 9.2 0.0 2.9 1 1 1 2 2 2 2 AAA domain DnaA_N PF11638.8 gi|121635884|ref|YP_976107.1| - 0.0091 15.7 0.0 0.033 13.9 0.0 2.0 2 0 0 2 2 2 1 DnaA N-terminal domain AFG1_ATPase PF03969.16 gi|121635884|ref|YP_976107.1| - 0.012 14.5 0.0 0.54 9.1 0.0 2.2 1 1 1 2 2 2 0 AFG1-like ATPase AAA_16 PF13191.6 gi|121635884|ref|YP_976107.1| - 0.015 15.7 0.4 0.25 11.7 0.0 2.7 3 1 0 3 3 3 0 AAA ATPase domain RNA_helicase PF00910.22 gi|121635884|ref|YP_976107.1| - 0.076 13.4 0.0 0.21 12.0 0.0 1.8 1 0 0 1 1 1 0 RNA helicase HTH_38 PF13936.6 gi|121635884|ref|YP_976107.1| - 0.082 12.7 0.0 0.28 11.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain ATPase_2 PF01637.18 gi|121635884|ref|YP_976107.1| - 0.13 12.2 0.0 0.45 10.4 0.0 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea DNA_pol3_beta PF00712.19 gi|121635885|ref|YP_976108.1| - 3.3e-44 149.9 0.0 5.2e-36 123.4 0.0 2.4 3 0 0 3 3 3 2 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_2 PF02767.16 gi|121635885|ref|YP_976108.1| - 2.6e-36 124.4 0.0 2e-33 115.0 0.0 2.7 3 0 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta_3 PF02768.15 gi|121635885|ref|YP_976108.1| - 1.4e-34 118.6 0.0 1.3e-33 115.4 0.0 2.3 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain SEF14_adhesin PF06443.11 gi|121635885|ref|YP_976108.1| - 0.12 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 SEF14-like adhesin SMC_N PF02463.19 gi|121635886|ref|YP_976109.1| - 9.5e-16 57.9 0.0 1.5e-15 57.2 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|121635886|ref|YP_976109.1| - 1.3e-07 32.3 0.0 1.7e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|121635886|ref|YP_976109.1| - 2.2e-06 27.7 0.1 0.00011 22.1 0.0 2.6 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|121635886|ref|YP_976109.1| - 4.2e-06 26.7 0.0 5.6e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|121635886|ref|YP_976109.1| - 0.025 15.1 0.0 0.042 14.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 gi|121635886|ref|YP_976109.1| - 0.074 13.0 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|121635886|ref|YP_976109.1| - 0.077 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|121635886|ref|YP_976109.1| - 0.081 13.2 0.1 0.2 11.9 0.1 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF2813 PF11398.8 gi|121635886|ref|YP_976109.1| - 0.14 11.4 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) DciA PF05258.12 gi|121635887|ref|YP_976110.1| - 1.2e-23 83.3 1.2 1.9e-23 82.7 1.2 1.3 1 0 0 1 1 1 1 Dna[CI] antecedent, DciA DUF962 PF06127.11 gi|121635887|ref|YP_976110.1| - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DNA_gyraseB PF00204.25 gi|121635888|ref|YP_976111.1| - 1e-63 213.9 2.1 2e-63 213.0 2.1 1.5 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|121635888|ref|YP_976111.1| - 2.7e-26 91.5 0.0 6.1e-26 90.4 0.0 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|121635888|ref|YP_976111.1| - 1.7e-20 73.6 0.0 4.7e-20 72.2 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|121635888|ref|YP_976111.1| - 4.3e-16 59.0 0.0 1.5e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 gi|121635888|ref|YP_976111.1| - 0.015 15.2 0.0 0.033 14.0 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|121635889|ref|YP_976112.1| - 2.2e-147 491.4 0.0 2.8e-147 491.1 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|121635889|ref|YP_976112.1| - 3e-70 231.5 12.9 4.7e-12 45.2 0.1 6.4 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller TPD52 PF04201.15 gi|121635889|ref|YP_976112.1| - 0.086 12.5 0.4 0.16 11.6 0.4 1.3 1 0 0 1 1 1 0 Tumour protein D52 family dCache_1 PF02743.18 gi|121635889|ref|YP_976112.1| - 0.11 12.3 0.4 1 9.1 0.0 2.7 3 1 0 3 3 3 0 Cache domain Nnf1 PF03980.14 gi|121635889|ref|YP_976112.1| - 0.49 10.8 2.5 1.1 9.6 2.5 1.7 1 0 0 1 1 1 0 Nnf1 DUF3566 PF12089.8 gi|121635890|ref|YP_976113.1| - 4.5e-41 139.9 6.5 5.6e-41 139.6 6.5 1.1 1 0 0 1 1 1 1 Transmembrane domain of unknown function (DUF3566) DUF2189 PF09955.9 gi|121635890|ref|YP_976113.1| - 0.034 14.4 4.5 0.047 13.9 4.0 1.5 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2189) Anoctamin PF04547.12 gi|121635890|ref|YP_976113.1| - 0.22 10.3 0.0 0.3 9.9 0.0 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF3270 PF11674.8 gi|121635890|ref|YP_976113.1| - 2.4 8.4 5.4 0.42 10.8 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) CwsA PF10814.8 gi|121635891|ref|YP_976114.1| - 8.3e-66 220.2 6.9 9.3e-66 220.0 6.9 1.0 1 0 0 1 1 1 1 Cell wall synthesis protein CwsA DotU PF09850.9 gi|121635891|ref|YP_976114.1| - 0.0065 16.2 0.8 0.0087 15.8 0.8 1.1 1 0 0 1 1 1 1 Type VI secretion system protein DotU VirB8 PF04335.13 gi|121635891|ref|YP_976114.1| - 0.024 14.5 0.0 0.039 13.8 0.0 1.3 1 0 0 1 1 1 0 VirB8 protein RUN PF02759.19 gi|121635891|ref|YP_976114.1| - 0.055 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 RUN domain Pro_isomerase PF00160.21 gi|121635892|ref|YP_976115.1| - 3.2e-48 164.0 0.1 3.7e-48 163.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD bPH_6 PF10756.9 gi|121635893|ref|YP_976116.1| - 8.2e-12 45.0 0.7 1.5e-11 44.2 0.7 1.4 1 0 0 1 1 1 1 Bacterial PH domain CrgA PF06781.12 gi|121635894|ref|YP_976117.1| - 2e-29 101.5 4.4 2.2e-29 101.3 4.4 1.0 1 0 0 1 1 1 1 Cell division protein CrgA DUF3273 PF11677.8 gi|121635894|ref|YP_976117.1| - 0.0029 17.0 1.1 0.0033 16.8 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3273) Myc_target_1 PF15179.6 gi|121635894|ref|YP_976117.1| - 8 6.3 5.8 4.9 7.0 4.4 1.5 1 1 1 2 2 2 0 Myc target protein 1 DUF881 PF05949.12 gi|121635895|ref|YP_976118.1| - 1.8e-37 128.4 0.0 2.8e-37 127.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF881) DASH_Spc19 PF08287.11 gi|121635895|ref|YP_976118.1| - 0.13 12.1 0.1 0.22 11.4 0.1 1.3 1 0 0 1 1 1 0 Spc19 GATase PF00117.28 gi|121635896|ref|YP_976119.1| - 1.5e-48 165.1 0.0 1.8e-48 164.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121635896|ref|YP_976119.1| - 1.4e-12 47.9 0.1 8.1e-12 45.3 0.1 2.0 1 1 0 1 1 1 1 Peptidase C26 Sigma70_r2 PF04542.14 gi|121635897|ref|YP_976120.1| - 1.8e-16 59.7 3.0 3.6e-16 58.7 3.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121635897|ref|YP_976120.1| - 1.3e-15 56.8 0.5 1.3e-15 56.8 0.5 2.2 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121635897|ref|YP_976120.1| - 9.6e-09 35.4 4.3 3.1e-05 23.9 0.3 2.1 1 1 0 2 2 2 2 ECF sigma factor Sigma70_r4 PF04545.16 gi|121635897|ref|YP_976120.1| - 1.4e-07 30.9 0.1 3.6e-07 29.6 0.1 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|121635897|ref|YP_976120.1| - 0.0056 16.5 0.3 0.019 14.7 0.3 2.0 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|121635897|ref|YP_976120.1| - 0.0056 16.8 1.5 0.011 15.8 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|121635897|ref|YP_976120.1| - 0.0084 16.0 0.0 0.021 14.7 0.0 1.7 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) DUF746 PF05344.11 gi|121635897|ref|YP_976120.1| - 0.04 13.8 0.0 0.084 12.7 0.0 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) GerE PF00196.19 gi|121635897|ref|YP_976120.1| - 0.064 12.8 0.0 0.21 11.1 0.0 1.8 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family DUF134 PF02001.16 gi|121635897|ref|YP_976120.1| - 0.099 13.2 0.1 0.16 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF134 Pyr_redox_2 PF07992.14 gi|121635899|ref|YP_976122.1| - 1.4e-48 165.6 0.6 1.6e-48 165.4 0.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121635899|ref|YP_976122.1| - 1.3e-23 83.7 0.0 2e-19 70.0 0.0 2.1 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121635899|ref|YP_976122.1| - 3.5e-20 72.3 1.3 5.6e-19 68.5 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121635899|ref|YP_976122.1| - 2.3e-08 34.0 9.4 0.0056 16.3 0.0 4.1 2 2 2 4 4 4 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121635899|ref|YP_976122.1| - 5e-08 32.5 11.9 7.8e-05 21.9 0.8 4.6 1 1 4 5 5 5 3 FAD binding domain GIDA PF01134.22 gi|121635899|ref|YP_976122.1| - 8.2e-08 31.7 1.7 0.0054 15.9 0.7 3.8 3 1 1 4 4 4 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|121635899|ref|YP_976122.1| - 4e-07 29.8 4.9 1.6e-06 27.7 0.7 3.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 gi|121635899|ref|YP_976122.1| - 1.7e-06 27.4 0.2 0.0039 16.4 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|121635899|ref|YP_976122.1| - 7.8e-06 24.8 0.1 0.0035 16.1 0.1 3.4 4 0 0 4 4 4 1 HI0933-like protein Thi4 PF01946.17 gi|121635899|ref|YP_976122.1| - 3.6e-05 23.1 0.0 0.00069 18.9 0.0 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|121635899|ref|YP_976122.1| - 0.00012 22.2 0.1 0.0081 16.4 0.0 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|121635899|ref|YP_976122.1| - 0.001 18.2 2.4 0.77 8.7 0.0 3.0 3 1 0 4 4 4 2 Lycopene cyclase protein NAD_binding_7 PF13241.6 gi|121635899|ref|YP_976122.1| - 0.0094 16.4 0.2 0.088 13.3 0.0 2.2 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|121635899|ref|YP_976122.1| - 0.011 15.0 1.8 0.96 8.6 0.1 2.9 2 1 1 3 3 3 0 FAD binding domain Trp_halogenase PF04820.14 gi|121635899|ref|YP_976122.1| - 0.02 13.7 0.3 1 8.1 0.1 2.8 3 0 0 3 3 3 0 Tryptophan halogenase SnoaL_2 PF12680.7 gi|121635899|ref|YP_976122.1| - 0.035 14.7 2.6 0.1 13.3 0.9 2.6 1 1 2 3 3 3 0 SnoaL-like domain NAD_binding_9 PF13454.6 gi|121635899|ref|YP_976122.1| - 0.11 12.5 7.4 0.76 9.8 0.0 3.5 3 1 1 4 4 4 0 FAD-NAD(P)-binding Thioredoxin PF00085.20 gi|121635900|ref|YP_976123.1| - 4.5e-33 113.3 0.0 5.1e-33 113.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|121635900|ref|YP_976123.1| - 1.3e-09 38.5 0.1 1.7e-08 34.9 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|121635900|ref|YP_976123.1| - 1.1e-06 28.8 0.0 0.00018 21.7 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like KaiB PF07689.12 gi|121635900|ref|YP_976123.1| - 1.1e-05 25.0 0.0 1.7e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 KaiB domain Thioredoxin_9 PF14595.6 gi|121635900|ref|YP_976123.1| - 5e-05 23.1 0.0 5.6e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|121635900|ref|YP_976123.1| - 7.9e-05 22.8 0.0 0.00012 22.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 gi|121635900|ref|YP_976123.1| - 0.00011 21.9 0.1 0.00013 21.7 0.1 1.3 1 1 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|121635900|ref|YP_976123.1| - 0.00038 20.4 0.0 0.0015 18.4 0.0 1.7 1 1 1 2 2 2 1 AhpC/TSA family OST3_OST6 PF04756.13 gi|121635900|ref|YP_976123.1| - 0.0011 18.4 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 gi|121635900|ref|YP_976123.1| - 0.0015 18.5 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain TraF PF13728.6 gi|121635900|ref|YP_976123.1| - 0.0021 17.9 0.0 0.0026 17.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 gi|121635900|ref|YP_976123.1| - 0.066 13.4 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 gi|121635900|ref|YP_976123.1| - 0.083 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) PG_binding_1 PF01471.18 gi|121635901|ref|YP_976124.1| - 1.4e-30 105.3 3.2 4.7e-16 58.7 0.1 3.0 3 0 0 3 3 3 2 Putative peptidoglycan binding domain Amidase_3 PF01520.18 gi|121635901|ref|YP_976124.1| - 1.2e-29 103.6 0.0 2e-29 103.0 0.0 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase PG_binding_3 PF09374.10 gi|121635901|ref|YP_976124.1| - 1.7e-08 34.6 0.1 0.12 12.7 0.0 3.5 2 1 1 3 3 3 3 Predicted Peptidoglycan domain PG_binding_2 PF08823.11 gi|121635901|ref|YP_976124.1| - 1.9e-05 24.9 0.4 0.00042 20.6 0.1 2.8 2 1 0 2 2 2 1 Putative peptidoglycan binding domain ParBc PF02195.18 gi|121635903|ref|YP_976126.1| - 3.2e-26 91.4 0.2 6.4e-26 90.5 0.2 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain HTH_ParB PF17762.1 gi|121635903|ref|YP_976126.1| - 4.6e-16 58.3 0.4 9.8e-16 57.3 0.4 1.5 1 0 0 1 1 1 1 HTH domain found in ParB protein TrmB PF01978.19 gi|121635903|ref|YP_976126.1| - 0.022 14.6 0.0 0.056 13.3 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HOASN PF14515.6 gi|121635903|ref|YP_976126.1| - 0.076 13.4 0.1 7.1 7.1 0.1 2.5 2 0 0 2 2 2 0 Haem-oxygenase-associated N-terminal helices HTH_Crp_2 PF13545.6 gi|121635903|ref|YP_976126.1| - 0.084 12.9 0.3 0.64 10.0 0.1 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain SoPB_HTH PF18090.1 gi|121635903|ref|YP_976126.1| - 0.11 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Centromere-binding protein HTH domain KorB PF08535.10 gi|121635903|ref|YP_976126.1| - 0.13 12.3 0.0 2.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KorB domain AAA_31 PF13614.6 gi|121635904|ref|YP_976127.1| - 6.5e-58 195.5 0.0 9.4e-58 195.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121635904|ref|YP_976127.1| - 1.8e-28 99.1 0.0 2.5e-28 98.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|121635904|ref|YP_976127.1| - 1.9e-10 40.6 2.0 3.1e-09 36.7 2.0 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|121635904|ref|YP_976127.1| - 1.1e-09 38.0 0.2 1.5e-07 31.0 0.1 2.4 3 0 0 3 3 3 1 ATPase MipZ Fer4_NifH PF00142.18 gi|121635904|ref|YP_976127.1| - 1.4e-09 37.8 0.1 4.3e-05 23.1 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|121635904|ref|YP_976127.1| - 2.3e-08 33.6 0.2 7.2e-08 32.0 0.2 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|121635904|ref|YP_976127.1| - 7.4e-05 22.3 0.1 0.00049 19.6 0.1 2.0 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|121635904|ref|YP_976127.1| - 0.0058 16.3 0.4 0.74 9.4 0.4 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain VirC1 PF07015.11 gi|121635904|ref|YP_976127.1| - 0.035 13.4 0.3 0.076 12.3 0.1 1.6 2 0 0 2 2 2 0 VirC1 protein AAA_25 PF13481.6 gi|121635904|ref|YP_976127.1| - 0.058 13.0 0.9 0.16 11.6 0.4 2.0 1 1 0 2 2 2 0 AAA domain MeaB PF03308.16 gi|121635904|ref|YP_976127.1| - 0.1 11.6 0.2 0.24 10.4 0.2 1.6 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|121635904|ref|YP_976127.1| - 0.17 11.7 0.6 0.57 9.9 0.0 2.1 3 1 0 3 3 3 0 mRNA cleavage and polyadenylation factor CLP1 P-loop GidB PF02527.15 gi|121635905|ref|YP_976128.1| - 1.1e-55 187.9 0.0 1.3e-55 187.6 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MTS PF05175.14 gi|121635905|ref|YP_976128.1| - 0.0022 17.6 0.0 0.0036 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain VP40 PF07447.12 gi|121635905|ref|YP_976128.1| - 0.08 12.0 0.0 0.098 11.8 0.0 1.1 1 0 0 1 1 1 0 Matrix protein VP40 Methyltransf_25 PF13649.6 gi|121635905|ref|YP_976128.1| - 0.12 13.0 0.0 0.24 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|121635905|ref|YP_976128.1| - 0.15 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase RrnaAD PF00398.20 gi|121635905|ref|YP_976128.1| - 0.16 11.0 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase R3H PF01424.22 gi|121635906|ref|YP_976129.1| - 6.5e-15 54.9 0.1 1.4e-14 53.8 0.1 1.6 2 0 0 2 2 2 1 R3H domain KH_4 PF13083.6 gi|121635906|ref|YP_976129.1| - 5.6e-07 29.3 0.0 9.3e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 KH domain 60KD_IMP PF02096.20 gi|121635907|ref|YP_976130.1| - 8.7e-49 165.6 0.4 1.2e-48 165.1 0.4 1.1 1 0 0 1 1 1 1 60Kd inner membrane protein Wzy_C PF04932.15 gi|121635907|ref|YP_976130.1| - 0.0084 15.8 0.1 0.28 10.8 0.0 2.2 2 0 0 2 2 2 1 O-Antigen ligase SicP-binding PF09119.10 gi|121635907|ref|YP_976130.1| - 0.082 12.9 0.2 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 SicP binding DUF2207 PF09972.9 gi|121635907|ref|YP_976130.1| - 0.13 11.0 1.6 1.7 7.3 0.6 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Halogen_Hydrol PF10112.9 gi|121635907|ref|YP_976130.1| - 0.25 11.4 1.4 0.62 10.1 0.3 2.1 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein LapA_dom PF06305.11 gi|121635907|ref|YP_976130.1| - 2.9 7.8 7.4 36 4.3 3.3 3.0 2 2 0 2 2 2 0 Lipopolysaccharide assembly protein A domain YidD PF01809.18 gi|121635908|ref|YP_976131.1| - 9.8e-27 92.6 0.1 1.3e-26 92.2 0.1 1.2 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor Ribonuclease_P PF00825.18 gi|121635909|ref|YP_976132.1| - 4.6e-23 81.4 0.3 5.3e-23 81.2 0.3 1.0 1 0 0 1 1 1 1 Ribonuclease P Ribosomal_L34 PF00468.17 gi|121635910|ref|YP_976133.1| - 3.6e-18 65.2 14.6 4e-18 65.1 14.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L34 Bac_DnaA PF00308.18 gi|121635911|ref|YP_976134.1| - 1.2e-103 345.7 0.1 2.5e-103 344.6 0.0 1.6 2 0 0 2 2 2 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 gi|121635911|ref|YP_976134.1| - 4e-27 94.0 0.0 8.4e-27 93.0 0.0 1.6 1 0 0 1 1 1 1 Bacterial dnaA protein helix-turn-helix IstB_IS21 PF01695.17 gi|121635911|ref|YP_976134.1| - 5.4e-10 39.3 0.0 1.1e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|121635911|ref|YP_976134.1| - 8.5e-06 26.2 0.0 0.00023 21.6 0.0 3.2 4 1 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|121635911|ref|YP_976134.1| - 0.0011 19.2 0.3 1.4 9.2 0.0 2.9 1 1 1 2 2 2 2 AAA domain DnaA_N PF11638.8 gi|121635911|ref|YP_976134.1| - 0.0091 15.7 0.0 0.033 13.9 0.0 2.0 2 0 0 2 2 2 1 DnaA N-terminal domain AFG1_ATPase PF03969.16 gi|121635911|ref|YP_976134.1| - 0.012 14.5 0.0 0.54 9.1 0.0 2.2 1 1 1 2 2 2 0 AFG1-like ATPase AAA_16 PF13191.6 gi|121635911|ref|YP_976134.1| - 0.015 15.7 0.4 0.25 11.7 0.0 2.7 3 1 0 3 3 3 0 AAA ATPase domain RNA_helicase PF00910.22 gi|121635911|ref|YP_976134.1| - 0.076 13.4 0.0 0.21 12.0 0.0 1.8 1 0 0 1 1 1 0 RNA helicase HTH_38 PF13936.6 gi|121635911|ref|YP_976134.1| - 0.082 12.7 0.0 0.28 11.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain ATPase_2 PF01637.18 gi|121635911|ref|YP_976134.1| - 0.13 12.2 0.0 0.45 10.4 0.0 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea DNA_pol3_beta PF00712.19 gi|121635912|ref|YP_976135.1| - 3.3e-44 149.9 0.0 5.2e-36 123.4 0.0 2.4 3 0 0 3 3 3 2 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_2 PF02767.16 gi|121635912|ref|YP_976135.1| - 2.6e-36 124.4 0.0 2e-33 115.0 0.0 2.7 3 0 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta_3 PF02768.15 gi|121635912|ref|YP_976135.1| - 1.4e-34 118.6 0.0 1.3e-33 115.4 0.0 2.3 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain SEF14_adhesin PF06443.11 gi|121635912|ref|YP_976135.1| - 0.12 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 SEF14-like adhesin SMC_N PF02463.19 gi|121635913|ref|YP_976136.1| - 9.5e-16 57.9 0.0 1.5e-15 57.2 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|121635913|ref|YP_976136.1| - 1.3e-07 32.3 0.0 1.7e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|121635913|ref|YP_976136.1| - 2.2e-06 27.7 0.1 0.00011 22.1 0.0 2.6 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|121635913|ref|YP_976136.1| - 4.2e-06 26.7 0.0 5.6e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|121635913|ref|YP_976136.1| - 0.025 15.1 0.0 0.042 14.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 gi|121635913|ref|YP_976136.1| - 0.074 13.0 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|121635913|ref|YP_976136.1| - 0.077 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|121635913|ref|YP_976136.1| - 0.081 13.2 0.1 0.2 11.9 0.1 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF2813 PF11398.8 gi|121635913|ref|YP_976136.1| - 0.14 11.4 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) DciA PF05258.12 gi|121635914|ref|YP_976137.1| - 1.2e-23 83.3 1.2 1.9e-23 82.7 1.2 1.3 1 0 0 1 1 1 1 Dna[CI] antecedent, DciA DUF962 PF06127.11 gi|121635914|ref|YP_976137.1| - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DNA_gyraseB PF00204.25 gi|121635915|ref|YP_976138.1| - 1e-63 213.9 2.1 2e-63 213.0 2.1 1.5 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|121635915|ref|YP_976138.1| - 2.7e-26 91.5 0.0 6.1e-26 90.4 0.0 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|121635915|ref|YP_976138.1| - 1.7e-20 73.6 0.0 4.7e-20 72.2 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|121635915|ref|YP_976138.1| - 4.3e-16 59.0 0.0 1.5e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 gi|121635915|ref|YP_976138.1| - 0.015 15.2 0.0 0.033 14.0 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|121635916|ref|YP_976139.1| - 2.2e-147 491.4 0.0 2.8e-147 491.1 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|121635916|ref|YP_976139.1| - 3e-70 231.5 12.9 4.7e-12 45.2 0.1 6.4 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller TPD52 PF04201.15 gi|121635916|ref|YP_976139.1| - 0.086 12.5 0.4 0.16 11.6 0.4 1.3 1 0 0 1 1 1 0 Tumour protein D52 family dCache_1 PF02743.18 gi|121635916|ref|YP_976139.1| - 0.11 12.3 0.4 1 9.1 0.0 2.7 3 1 0 3 3 3 0 Cache domain Nnf1 PF03980.14 gi|121635916|ref|YP_976139.1| - 0.49 10.8 2.5 1.1 9.6 2.5 1.7 1 0 0 1 1 1 0 Nnf1 DUF3566 PF12089.8 gi|121635917|ref|YP_976140.1| - 4.5e-41 139.9 6.5 5.6e-41 139.6 6.5 1.1 1 0 0 1 1 1 1 Transmembrane domain of unknown function (DUF3566) DUF2189 PF09955.9 gi|121635917|ref|YP_976140.1| - 0.034 14.4 4.5 0.047 13.9 4.0 1.5 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2189) Anoctamin PF04547.12 gi|121635917|ref|YP_976140.1| - 0.22 10.3 0.0 0.3 9.9 0.0 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF3270 PF11674.8 gi|121635917|ref|YP_976140.1| - 2.4 8.4 5.4 0.42 10.8 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) CwsA PF10814.8 gi|121635918|ref|YP_976141.1| - 8.3e-66 220.2 6.9 9.3e-66 220.0 6.9 1.0 1 0 0 1 1 1 1 Cell wall synthesis protein CwsA DotU PF09850.9 gi|121635918|ref|YP_976141.1| - 0.0065 16.2 0.8 0.0087 15.8 0.8 1.1 1 0 0 1 1 1 1 Type VI secretion system protein DotU VirB8 PF04335.13 gi|121635918|ref|YP_976141.1| - 0.024 14.5 0.0 0.039 13.8 0.0 1.3 1 0 0 1 1 1 0 VirB8 protein RUN PF02759.19 gi|121635918|ref|YP_976141.1| - 0.055 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 RUN domain Pro_isomerase PF00160.21 gi|121635919|ref|YP_976142.1| - 3.2e-48 164.0 0.1 3.7e-48 163.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD bPH_6 PF10756.9 gi|121635920|ref|YP_976143.1| - 8.2e-12 45.0 0.7 1.5e-11 44.2 0.7 1.4 1 0 0 1 1 1 1 Bacterial PH domain CrgA PF06781.12 gi|121635921|ref|YP_976144.1| - 2e-29 101.5 4.4 2.2e-29 101.3 4.4 1.0 1 0 0 1 1 1 1 Cell division protein CrgA DUF3273 PF11677.8 gi|121635921|ref|YP_976144.1| - 0.0029 17.0 1.1 0.0033 16.8 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3273) Myc_target_1 PF15179.6 gi|121635921|ref|YP_976144.1| - 8 6.3 5.8 4.9 7.0 4.4 1.5 1 1 1 2 2 2 0 Myc target protein 1 DUF881 PF05949.12 gi|121635922|ref|YP_976145.1| - 1.8e-37 128.4 0.0 2.8e-37 127.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF881) DASH_Spc19 PF08287.11 gi|121635922|ref|YP_976145.1| - 0.13 12.1 0.1 0.22 11.4 0.1 1.3 1 0 0 1 1 1 0 Spc19 GATase PF00117.28 gi|121635923|ref|YP_976146.1| - 1.5e-48 165.1 0.0 1.8e-48 164.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121635923|ref|YP_976146.1| - 1.4e-12 47.9 0.1 8.1e-12 45.3 0.1 2.0 1 1 0 1 1 1 1 Peptidase C26 PASTA PF03793.19 gi|121635924|ref|YP_976147.1| - 9.4e-54 179.1 9.0 4.2e-17 61.7 0.4 4.3 4 0 0 4 4 4 4 PASTA domain Pkinase PF00069.25 gi|121635924|ref|YP_976147.1| - 1.2e-50 172.3 0.0 1.6e-50 171.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121635924|ref|YP_976147.1| - 1.5e-35 122.7 0.0 2.1e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121635924|ref|YP_976147.1| - 1.4e-06 28.5 2.0 0.013 15.4 0.0 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|121635924|ref|YP_976147.1| - 2.4e-05 23.3 0.0 3.8e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase SMC_ScpB PF04079.16 gi|121635924|ref|YP_976147.1| - 0.082 12.5 0.0 6.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Segregation and condensation complex subunit ScpB Kdo PF06293.14 gi|121635924|ref|YP_976147.1| - 0.24 10.7 0.0 0.39 10.0 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|121635925|ref|YP_976148.1| - 1.7e-46 158.8 0.0 2.2e-46 158.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121635925|ref|YP_976148.1| - 2e-32 112.5 0.0 2.7e-32 112.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121635925|ref|YP_976148.1| - 2.3e-06 27.7 0.1 0.0003 20.8 0.0 2.5 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|121635925|ref|YP_976148.1| - 8.4e-06 25.3 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|121635925|ref|YP_976148.1| - 0.0016 17.3 0.0 0.0021 16.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 gi|121635925|ref|YP_976148.1| - 0.014 14.3 0.0 0.019 13.9 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 gi|121635925|ref|YP_976148.1| - 0.021 14.4 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 gi|121635925|ref|YP_976148.1| - 0.049 12.9 0.0 0.12 11.7 0.0 1.6 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 gi|121635925|ref|YP_976148.1| - 0.059 13.5 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 ABC1 family Transpeptidase PF00905.22 gi|121635926|ref|YP_976149.1| - 1.2e-75 254.6 0.0 1.4e-75 254.3 0.0 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain FTSW_RODA_SPOVE PF01098.19 gi|121635927|ref|YP_976150.1| - 3.6e-105 351.9 17.3 5.9e-105 351.2 17.3 1.3 1 0 0 1 1 1 1 Cell cycle protein DUF3278 PF11683.8 gi|121635927|ref|YP_976150.1| - 0.47 10.5 3.9 46 4.1 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF3278) PP2C_2 PF13672.6 gi|121635928|ref|YP_976151.1| - 1.3e-13 51.1 0.4 2.2e-13 50.4 0.4 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C PF00481.21 gi|121635928|ref|YP_976151.1| - 8.2e-08 32.2 0.0 7e-06 25.9 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C Yop-YscD_cpl PF16697.5 gi|121635929|ref|YP_976152.1| - 2.5e-16 59.8 0.0 3.2e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FHA PF00498.26 gi|121635929|ref|YP_976152.1| - 2.2e-15 56.7 0.0 3.4e-15 56.2 0.0 1.3 1 0 0 1 1 1 1 FHA domain DUF3662 PF12401.8 gi|121635930|ref|YP_976153.1| - 9.1e-35 119.5 0.0 1.3e-34 119.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2662) FHA PF00498.26 gi|121635930|ref|YP_976153.1| - 1.2e-16 60.8 0.0 2e-16 60.1 0.0 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|121635930|ref|YP_976153.1| - 2.3e-14 53.5 0.1 3.5e-14 52.9 0.1 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain NMO PF03060.15 gi|121635931|ref|YP_976154.1| - 5.3e-40 137.8 6.4 1.2e-29 103.8 0.8 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase IMPDH PF00478.25 gi|121635931|ref|YP_976154.1| - 1.9e-10 40.3 4.6 9e-05 21.6 0.0 2.4 2 1 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|121635931|ref|YP_976154.1| - 5.2e-08 32.3 4.5 8.4e-08 31.6 4.5 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|121635931|ref|YP_976154.1| - 0.00048 19.7 0.1 0.00076 19.0 0.1 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|121635931|ref|YP_976154.1| - 0.008 15.4 1.2 0.015 14.5 1.2 1.4 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase ThiG PF05690.14 gi|121635931|ref|YP_976154.1| - 0.0094 15.3 0.9 0.0094 15.3 0.9 1.9 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG Whib PF02467.16 gi|121635932|ref|YP_976155.1| - 2.7e-13 50.3 1.6 3.9e-13 49.8 1.6 1.2 1 0 0 1 1 1 1 Transcription factor WhiB HTH_3 PF01381.22 gi|121635933|ref|YP_976156.1| - 1.5e-11 44.1 0.0 1.3e-10 41.2 0.0 2.2 1 1 1 2 2 2 2 Helix-turn-helix HTH_31 PF13560.6 gi|121635933|ref|YP_976156.1| - 6.7e-11 42.4 5.7 1.4e-09 38.1 0.5 2.7 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_25 PF13413.6 gi|121635933|ref|YP_976156.1| - 0.00043 20.1 0.0 0.008 16.0 0.0 2.8 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121635933|ref|YP_976156.1| - 0.008 16.2 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_35 PF13693.6 gi|121635933|ref|YP_976156.1| - 0.029 14.4 0.1 10 6.3 0.0 3.0 2 1 1 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_37 PF13744.6 gi|121635933|ref|YP_976156.1| - 0.043 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121635933|ref|YP_976156.1| - 0.063 13.1 2.6 4.7 7.1 0.1 3.1 3 0 0 3 3 3 0 IclR helix-turn-helix domain DUF5130 PF17174.4 gi|121635933|ref|YP_976156.1| - 0.1 12.8 0.5 0.32 11.2 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5130) DUF4226 PF10774.9 gi|121635935|ref|YP_976158.1| - 3e-38 130.5 12.4 3.4e-38 130.3 12.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4226) SKA2 PF16740.5 gi|121635935|ref|YP_976158.1| - 0.022 14.5 2.1 0.051 13.4 0.4 1.9 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 Rnk_N PF14760.6 gi|121635935|ref|YP_976158.1| - 6.3 7.4 12.3 45 4.6 0.1 3.0 2 1 0 2 2 2 0 Rnk N-terminus DUF4226 PF10774.9 gi|121635936|ref|YP_976159.1| - 7.1e-36 122.9 5.7 1e-35 122.3 3.9 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4226) 2_5_RNA_ligase2 PF13563.6 gi|121635936|ref|YP_976159.1| - 0.091 12.7 0.2 1.4 8.8 0.1 2.2 2 0 0 2 2 2 0 2'-5' RNA ligase superfamily T7SS_ESX_EspC PF10824.8 gi|121635937|ref|YP_976160.1| - 6.2e-29 100.4 1.7 6.9e-29 100.3 1.7 1.0 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm WXG100 PF06013.12 gi|121635937|ref|YP_976160.1| - 0.034 14.4 4.1 0.93 9.8 4.1 2.2 1 1 0 1 1 1 0 Proteins of 100 residues with WXG KxDL PF10241.9 gi|121635937|ref|YP_976160.1| - 0.096 13.0 0.8 0.17 12.2 0.3 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF3775 PF12616.8 gi|121635937|ref|YP_976160.1| - 0.11 12.5 0.4 0.36 10.9 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3775) DUF2694 PF10904.8 gi|121635938|ref|YP_976161.1| - 3.4e-61 203.3 1.1 3.8e-61 203.2 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2694) DUF5631 PF18645.1 gi|121635939|ref|YP_976162.1| - 2.4e-36 124.0 0.4 6.4e-36 122.6 0.4 1.8 1 0 0 1 1 1 1 Family of unknown function (DUF5631) DUF5632 PF18646.1 gi|121635939|ref|YP_976162.1| - 1.9e-35 120.8 0.3 7.2e-35 118.9 0.3 2.1 1 0 0 1 1 1 1 Family of unknown function (DUF5632) Ribosomal_L5 PF00281.19 gi|121635939|ref|YP_976162.1| - 0.19 12.1 0.0 0.87 10.0 0.0 2.1 2 0 0 2 2 2 0 Ribosomal protein L5 DUF2710 PF10921.8 gi|121635940|ref|YP_976163.1| - 1.3e-63 211.9 2.1 1.4e-63 211.8 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2710) YbaB_DNA_bd PF02575.16 gi|121635940|ref|YP_976163.1| - 0.00051 20.2 0.0 0.00083 19.5 0.0 1.3 1 1 0 1 1 1 1 YbaB/EbfC DNA-binding family DUF4129 PF13559.6 gi|121635940|ref|YP_976163.1| - 0.0012 19.0 4.2 0.51 10.6 0.2 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4129) Aminotran_1_2 PF00155.21 gi|121635942|ref|YP_976165.1| - 2.5e-55 188.2 0.0 3e-55 187.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Acetyltransf_6 PF13480.7 gi|121635942|ref|YP_976165.1| - 5.6e-08 33.0 1.2 5.6e-08 33.0 1.2 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Beta_elim_lyase PF01212.21 gi|121635942|ref|YP_976165.1| - 6e-07 29.0 0.1 1.1e-06 28.2 0.1 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|121635942|ref|YP_976165.1| - 3e-06 26.8 0.1 5.1e-06 26.0 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|121635942|ref|YP_976165.1| - 2.1e-05 23.2 0.0 3.4e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|121635942|ref|YP_976165.1| - 0.00012 21.2 0.0 0.00019 20.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.20 gi|121635942|ref|YP_976165.1| - 0.0047 15.7 0.1 0.096 11.4 0.1 2.1 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain FemAB_like PF04339.12 gi|121635942|ref|YP_976165.1| - 0.018 14.2 0.0 0.027 13.6 0.0 1.2 1 0 0 1 1 1 0 Peptidogalycan biosysnthesis/recognition PP-binding PF00550.25 gi|121635943|ref|YP_976166.1| - 2.1e-11 44.0 0.4 2.3e-11 43.8 0.4 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site Guanylate_cyc PF00211.20 gi|121635943|ref|YP_976166.1| - 0.013 15.1 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Adenylate and Guanylate cyclase catalytic domain SnoaL_2 PF12680.7 gi|121635944|ref|YP_976167.1| - 8.1e-11 42.5 1.1 1e-10 42.2 1.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|121635944|ref|YP_976167.1| - 9.8e-05 22.7 0.2 0.00016 22.1 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_4 PF13577.6 gi|121635944|ref|YP_976167.1| - 0.0028 17.8 0.1 0.0033 17.5 0.1 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|121635944|ref|YP_976167.1| - 0.021 15.1 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain SnoaL PF07366.12 gi|121635944|ref|YP_976167.1| - 0.088 12.6 0.1 0.16 11.7 0.1 1.5 1 1 0 1 1 1 0 SnoaL-like polyketide cyclase TMV_coat PF00721.21 gi|121635944|ref|YP_976167.1| - 0.11 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Virus coat protein (TMV like) AMP-binding PF00501.28 gi|121635945|ref|YP_976168.1| - 3.1e-52 177.6 0.0 3.8e-52 177.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme PLA2_B PF01735.18 gi|121635945|ref|YP_976168.1| - 0.11 10.8 0.0 0.17 10.3 0.0 1.1 1 0 0 1 1 1 0 Lysophospholipase catalytic domain MDMPI_N PF11716.8 gi|121635946|ref|YP_976169.1| - 5.1e-31 108.2 21.2 8.3e-31 107.6 21.2 1.3 1 0 0 1 1 1 1 Mycothiol maleylpyruvate isomerase N-terminal domain DinB_2 PF12867.7 gi|121635946|ref|YP_976169.1| - 6.9e-08 33.1 6.4 6.9e-08 33.1 6.4 1.6 1 1 0 1 1 1 1 DinB superfamily DinB PF05163.12 gi|121635946|ref|YP_976169.1| - 0.08 12.9 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 DinB family MFS_1 PF07690.16 gi|121635947|ref|YP_976170.1| - 3.6e-10 39.3 43.0 3.6e-10 39.3 43.0 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF179 PF02622.15 gi|121635948|ref|YP_976171.1| - 1.1e-35 123.0 0.0 1.4e-35 122.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 DUF308 PF03729.13 gi|121635949|ref|YP_976172.1| - 0.027 14.8 2.2 0.027 14.8 2.2 2.1 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) Lpp-LpqN PF10738.9 gi|121635950|ref|YP_976173.1| - 8.7e-63 210.9 0.0 1.1e-62 210.6 0.0 1.1 1 0 0 1 1 1 1 Probable lipoprotein LpqN tRNA-synt_1_2 PF13603.6 gi|121635951|ref|YP_976174.1| - 4.3e-55 186.1 0.0 1.4e-54 184.4 0.0 1.8 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 gi|121635951|ref|YP_976174.1| - 2.3e-34 118.6 0.0 7.6e-18 64.1 0.0 5.2 3 2 1 4 4 4 4 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|121635951|ref|YP_976174.1| - 1.6e-15 56.8 0.0 3.6e-12 45.7 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|121635951|ref|YP_976174.1| - 6.6e-13 48.9 0.0 1.3e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA S4 PF01479.25 gi|121635951|ref|YP_976174.1| - 0.31 10.8 1.0 0.93 9.3 0.0 2.2 2 0 0 2 2 2 0 S4 domain MarR PF01047.22 gi|121635952|ref|YP_976175.1| - 1.2e-17 63.6 1.0 3.1e-17 62.2 0.4 1.9 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|121635952|ref|YP_976175.1| - 1.6e-09 37.5 2.0 3.1e-09 36.6 1.3 1.9 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|121635952|ref|YP_976175.1| - 8.2e-06 26.2 0.2 2e-05 25.0 0.1 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|121635952|ref|YP_976175.1| - 0.00063 19.2 0.8 0.0012 18.4 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|121635952|ref|YP_976175.1| - 0.00093 19.0 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|121635952|ref|YP_976175.1| - 0.012 15.4 0.1 0.025 14.4 0.1 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Fe_dep_repress PF01325.19 gi|121635952|ref|YP_976175.1| - 0.016 15.4 0.0 0.063 13.5 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MerR PF00376.23 gi|121635952|ref|YP_976175.1| - 0.12 12.1 0.1 0.35 10.7 0.1 1.8 1 0 0 1 1 1 0 MerR family regulatory protein HTH_34 PF13601.6 gi|121635952|ref|YP_976175.1| - 0.16 12.2 0.0 0.37 11.0 0.0 1.7 1 1 0 1 1 1 0 Winged helix DNA-binding domain Cys_Met_Meta_PP PF01053.20 gi|121635952|ref|YP_976175.1| - 0.21 10.1 0.0 0.26 9.8 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme HTH_Crp_2 PF13545.6 gi|121635952|ref|YP_976175.1| - 0.85 9.6 4.0 0.25 11.4 0.6 1.9 2 1 0 2 2 2 0 Crp-like helix-turn-helix domain GntR PF00392.21 gi|121635953|ref|YP_976176.1| - 5.5e-13 48.4 0.1 8.9e-13 47.7 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 gi|121635953|ref|YP_976176.1| - 7.4e-05 23.2 2.0 0.00012 22.5 2.0 1.3 1 0 0 1 1 1 1 FCD domain HTH_Crp_2 PF13545.6 gi|121635953|ref|YP_976176.1| - 0.0014 18.6 0.0 0.0028 17.6 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_41 PF14502.6 gi|121635953|ref|YP_976176.1| - 0.0024 17.5 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|121635953|ref|YP_976176.1| - 0.049 14.0 0.0 0.097 13.0 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 gi|121635953|ref|YP_976176.1| - 0.051 13.5 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|121635953|ref|YP_976176.1| - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Bac_luciferase PF00296.20 gi|121635954|ref|YP_976177.1| - 8.4e-33 114.1 0.1 2.4e-32 112.6 0.1 1.6 1 1 0 1 1 1 1 Luciferase-like monooxygenase Abhydrolase_6 PF12697.7 gi|121635955|ref|YP_976178.1| - 1.7e-19 71.3 9.6 2e-19 71.1 9.6 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121635955|ref|YP_976178.1| - 5.2e-11 42.7 0.4 5.7e-10 39.3 0.4 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121635955|ref|YP_976178.1| - 5.5e-06 25.8 0.7 3.7e-05 23.1 0.7 2.2 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 gi|121635955|ref|YP_976178.1| - 0.01 15.5 0.0 0.014 15.0 0.0 1.4 1 1 0 1 1 1 0 Putative esterase Ndr PF03096.14 gi|121635955|ref|YP_976178.1| - 0.011 14.5 0.0 0.21 10.2 0.0 2.0 2 0 0 2 2 2 0 Ndr family Inos-1-P_synth PF01658.17 gi|121635956|ref|YP_976179.1| - 2e-32 111.7 0.0 1.1e-31 109.3 0.0 2.0 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 gi|121635956|ref|YP_976179.1| - 0.048 13.9 0.0 0.17 12.1 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain NAD_binding_5 PF07994.12 gi|121635956|ref|YP_976179.1| - 0.11 11.9 0.0 0.23 10.8 0.0 1.6 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase PadR PF03551.14 gi|121635957|ref|YP_976180.1| - 2.3e-22 78.7 0.0 3.8e-22 78.0 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Vir_act_alpha_C PF10400.9 gi|121635957|ref|YP_976180.1| - 0.00011 22.8 0.6 0.00021 21.9 0.6 1.4 1 0 0 1 1 1 1 Virulence activator alpha C-term AphA_like PF14557.6 gi|121635957|ref|YP_976180.1| - 0.0061 16.3 0.0 0.008 15.9 0.0 1.2 1 0 0 1 1 1 1 Putative AphA-like transcriptional regulator HxlR PF01638.17 gi|121635957|ref|YP_976180.1| - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF1707 PF08044.11 gi|121635958|ref|YP_976181.1| - 4.2e-17 62.0 6.2 7.5e-17 61.1 6.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) DUF5318 PF17249.2 gi|121635959|ref|YP_976182.1| - 2.4e-58 195.6 0.1 2.7e-58 195.4 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5318) Transgly PF00912.22 gi|121635960|ref|YP_976183.1| - 1.4e-56 190.8 0.0 2.3e-56 190.1 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase Transpeptidase PF00905.22 gi|121635960|ref|YP_976183.1| - 7.9e-27 94.2 1.6 1.3e-26 93.6 1.6 1.3 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain GT87 PF09594.10 gi|121635961|ref|YP_976184.1| - 1.6e-14 54.2 36.9 1.6e-14 54.2 36.9 3.1 2 1 1 3 3 3 1 Glycosyltransferase family 87 Mannosyl_trans PF05007.13 gi|121635961|ref|YP_976184.1| - 0.046 13.6 13.9 0.12 12.2 0.0 3.0 3 0 0 3 3 3 0 Mannosyltransferase (PIG-M) DJ-1_PfpI PF01965.24 gi|121635962|ref|YP_976185.1| - 3.5e-21 75.7 0.0 4.3e-21 75.4 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family Ribosomal_S6 PF01250.17 gi|121635963|ref|YP_976186.1| - 4e-28 97.5 0.0 4.4e-28 97.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6 SSB PF00436.25 gi|121635964|ref|YP_976187.1| - 1.2e-30 105.6 0.0 1.5e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Single-strand binding protein family tRNA_anti-codon PF01336.25 gi|121635964|ref|YP_976187.1| - 1.6e-05 24.8 0.1 2.7e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|121635964|ref|YP_976187.1| - 0.014 15.6 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Ribosomal_S3_C PF00189.20 gi|121635964|ref|YP_976187.1| - 0.014 15.9 0.1 0.021 15.3 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain Ribosomal_S18 PF01084.20 gi|121635965|ref|YP_976188.1| - 2e-22 79.2 0.5 2.5e-22 78.8 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Ribosomal_L9_C PF03948.14 gi|121635966|ref|YP_976189.1| - 6.9e-23 80.9 0.3 9.9e-23 80.4 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 gi|121635966|ref|YP_976189.1| - 4.5e-20 70.9 0.0 7.4e-20 70.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain DnaB_C PF03796.15 gi|121635968|ref|YP_976191.1| - 4.5e-96 321.1 0.0 5.4e-96 320.8 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 gi|121635968|ref|YP_976191.1| - 9.7e-34 115.6 0.0 3.2e-33 113.9 0.0 1.9 2 0 0 2 2 2 1 DnaB-like helicase N terminal domain Intein_splicing PF14890.6 gi|121635968|ref|YP_976191.1| - 1.8e-20 73.3 0.0 3e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Intein splicing domain LAGLIDADG_3 PF14528.6 gi|121635968|ref|YP_976191.1| - 7.8e-19 67.8 0.0 2.2e-18 66.3 0.0 1.8 2 0 0 2 2 2 1 LAGLIDADG-like domain AAA_25 PF13481.6 gi|121635968|ref|YP_976191.1| - 1.9e-15 56.9 0.0 4.9e-15 55.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|121635968|ref|YP_976191.1| - 1.9e-05 24.1 0.0 3.5e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 KaiC TniB PF05621.11 gi|121635968|ref|YP_976191.1| - 0.015 14.7 0.2 0.05 13.0 0.1 1.8 2 0 0 2 2 2 0 Bacterial TniB protein TIP49 PF06068.13 gi|121635968|ref|YP_976191.1| - 0.026 13.7 0.1 0.042 13.1 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_22 PF13401.6 gi|121635968|ref|YP_976191.1| - 0.037 14.3 0.0 0.088 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain DarT PF14487.6 gi|121635969|ref|YP_976192.1| - 9e-55 185.6 0.0 1e-54 185.4 0.0 1.0 1 0 0 1 1 1 1 ssDNA thymidine ADP-ribosyltransferase, DarT Macro PF01661.21 gi|121635970|ref|YP_976193.1| - 1e-23 83.6 0.0 1.6e-23 83.0 0.0 1.3 1 0 0 1 1 1 1 Macro domain DUF1719 PF08224.11 gi|121635970|ref|YP_976193.1| - 0.00087 18.5 0.0 0.0012 18.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1719) Glyco_hydro_6 PF01341.17 gi|121635972|ref|YP_976195.1| - 5.5e-71 239.8 0.0 6.6e-71 239.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 6 FAD_binding_4 PF01565.23 gi|121635973|ref|YP_976196.1| - 1.9e-30 105.4 5.9 1.9e-30 105.4 4.1 2.0 2 0 0 2 2 2 1 FAD binding domain BBE PF08031.12 gi|121635973|ref|YP_976196.1| - 3.8e-08 33.3 0.1 8e-08 32.3 0.1 1.5 1 0 0 1 1 1 1 Berberine and berberine like UPF0182 PF03699.13 gi|121635974|ref|YP_976197.1| - 2.8e-272 905.3 0.0 3.4e-272 905.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0182) PIN PF01850.21 gi|121635976|ref|YP_976199.1| - 7.2e-06 26.5 0.1 8.6e-06 26.3 0.1 1.1 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|121635976|ref|YP_976199.1| - 0.009 16.2 0.0 0.015 15.5 0.0 1.3 1 1 0 1 1 1 1 PIN domain IDH PF03971.14 gi|121635977|ref|YP_976200.1| - 0 1249.5 0.0 0 1249.3 0.0 1.0 1 0 0 1 1 1 1 Monomeric isocitrate dehydrogenase TetR_N PF00440.23 gi|121635978|ref|YP_976201.1| - 8.1e-15 54.4 0.1 1.7e-14 53.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_29 PF17938.1 gi|121635978|ref|YP_976201.1| - 0.00048 20.2 0.0 0.0011 19.1 0.0 1.5 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_21 PF17926.1 gi|121635978|ref|YP_976201.1| - 0.024 14.7 0.1 0.024 14.7 0.1 2.2 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DprA_WH PF17782.1 gi|121635978|ref|YP_976201.1| - 0.027 14.6 0.1 0.083 13.0 0.1 1.9 1 0 0 1 1 1 0 DprA winged helix domain LacI PF00356.21 gi|121635978|ref|YP_976201.1| - 0.12 12.2 0.0 0.43 10.4 0.0 2.0 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family adh_short PF00106.25 gi|121635979|ref|YP_976202.1| - 6.5e-29 100.8 0.8 8.3e-28 97.2 0.8 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121635979|ref|YP_976202.1| - 5.1e-20 72.0 1.6 2.6e-19 69.7 1.6 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121635979|ref|YP_976202.1| - 1.8e-10 41.1 0.9 2.6e-10 40.5 0.9 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121635979|ref|YP_976202.1| - 0.0022 17.5 0.1 0.0028 17.1 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121635979|ref|YP_976202.1| - 0.3 11.0 3.6 0.46 10.3 3.6 1.5 1 1 0 1 1 1 0 NAD(P)H-binding SDH_alpha PF03313.15 gi|121635980|ref|YP_976203.1| - 1.6e-96 323.0 6.3 1.5e-95 319.8 4.8 2.1 2 0 0 2 2 2 1 Serine dehydratase alpha chain SDH_beta PF03315.15 gi|121635980|ref|YP_976203.1| - 3.5e-54 183.4 0.0 6.5e-54 182.5 0.0 1.5 1 0 0 1 1 1 1 Serine dehydratase beta chain SHMT PF00464.19 gi|121635981|ref|YP_976204.1| - 4.8e-159 529.2 0.0 5.7e-159 529.0 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|121635981|ref|YP_976204.1| - 3.9e-09 36.1 0.0 7.5e-09 35.2 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|121635981|ref|YP_976204.1| - 1e-05 25.0 1.0 1.4e-05 24.6 1.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|121635981|ref|YP_976204.1| - 0.00013 21.3 0.5 0.00044 19.6 0.5 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|121635981|ref|YP_976204.1| - 0.011 14.3 0.0 0.016 13.8 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme RVT_1 PF00078.27 gi|121635982|ref|YP_976205.1| - 1e-17 64.4 0.0 1.3e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) FtsX PF02687.21 gi|121635983|ref|YP_976206.1| - 0.00012 22.5 10.2 0.00012 22.5 10.2 3.4 2 1 1 3 3 3 2 FtsX-like permease family ABC_tran PF00005.27 gi|121635984|ref|YP_976207.1| - 1.5e-32 113.0 0.0 2.9e-32 112.1 0.0 1.5 1 0 0 1 1 1 1 ABC transporter cNMP_binding PF00027.29 gi|121635984|ref|YP_976207.1| - 3.4e-19 68.7 0.5 9.2e-19 67.3 0.2 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain AAA_21 PF13304.6 gi|121635984|ref|YP_976207.1| - 9.6e-09 35.5 0.2 0.00061 19.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121635984|ref|YP_976207.1| - 2.2e-08 33.8 0.0 6.9e-08 32.2 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|121635984|ref|YP_976207.1| - 0.00016 22.1 0.2 0.00036 21.0 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|121635984|ref|YP_976207.1| - 0.00073 19.0 0.0 0.0014 18.1 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Urease_beta PF00699.20 gi|121635984|ref|YP_976207.1| - 0.0038 17.2 0.0 0.017 15.1 0.0 2.0 2 0 0 2 2 2 1 Urease beta subunit AAA PF00004.29 gi|121635984|ref|YP_976207.1| - 0.004 17.6 0.2 0.016 15.6 0.2 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|121635984|ref|YP_976207.1| - 0.0044 16.6 2.5 0.0068 16.0 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|121635984|ref|YP_976207.1| - 0.0066 17.0 0.0 0.0099 16.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|121635984|ref|YP_976207.1| - 0.0069 16.1 0.1 0.015 15.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|121635984|ref|YP_976207.1| - 0.0074 16.6 1.5 0.061 13.6 1.5 2.1 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|121635984|ref|YP_976207.1| - 0.011 15.7 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|121635984|ref|YP_976207.1| - 0.014 15.3 0.0 0.029 14.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase PduV-EutP PF10662.9 gi|121635984|ref|YP_976207.1| - 0.017 14.8 0.2 0.077 12.7 0.2 1.9 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|121635984|ref|YP_976207.1| - 0.022 14.7 1.1 0.21 11.5 0.3 2.1 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|121635984|ref|YP_976207.1| - 0.027 15.0 0.3 1.2 9.7 0.0 2.6 2 1 1 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|121635984|ref|YP_976207.1| - 0.12 12.4 0.2 0.27 11.2 0.2 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|121635984|ref|YP_976207.1| - 0.21 11.7 0.3 0.21 11.7 0.3 2.1 3 0 0 3 3 2 0 AAA domain DLIC PF05783.11 gi|121635984|ref|YP_976207.1| - 0.21 10.4 0.0 0.33 9.7 0.0 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_15 PF13175.6 gi|121635984|ref|YP_976207.1| - 0.24 11.1 0.0 8.2 6.0 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_24 PF13479.6 gi|121635984|ref|YP_976207.1| - 0.25 11.0 0.0 0.49 10.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Amidohydro_1 PF01979.20 gi|121635985|ref|YP_976208.1| - 6.2e-52 177.0 0.1 7.7e-52 176.7 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|121635985|ref|YP_976208.1| - 5.3e-21 75.6 14.1 1.9e-16 60.6 9.0 2.2 1 1 1 2 2 2 2 Amidohydrolase family PTE PF02126.18 gi|121635985|ref|YP_976208.1| - 0.028 13.9 0.0 0.056 12.9 0.0 1.4 1 1 0 1 1 1 0 Phosphotriesterase family HMGL-like PF00682.19 gi|121635985|ref|YP_976208.1| - 0.052 13.1 1.8 0.11 12.1 1.8 1.5 1 0 0 1 1 1 0 HMGL-like Aminotran_1_2 PF00155.21 gi|121635986|ref|YP_976209.1| - 1.9e-32 112.9 0.0 2.2e-32 112.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DisA_N PF02457.16 gi|121635986|ref|YP_976209.1| - 0.078 12.6 0.4 0.14 11.7 0.4 1.4 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding NIR_SIR_ferr PF03460.17 gi|121635986|ref|YP_976209.1| - 0.088 12.7 0.0 7.6 6.5 0.0 2.5 2 0 0 2 2 2 0 Nitrite/Sulfite reductase ferredoxin-like half domain Beta_elim_lyase PF01212.21 gi|121635986|ref|YP_976209.1| - 0.18 11.1 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase Abhydrolase_1 PF00561.20 gi|121635988|ref|YP_976211.1| - 2.2e-14 53.7 0.0 3.7e-14 53.0 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121635988|ref|YP_976211.1| - 1e-12 49.2 9.3 1.2e-12 49.0 9.3 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121635988|ref|YP_976211.1| - 1.3e-06 27.8 0.2 3.6e-06 26.4 0.2 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|121635988|ref|YP_976211.1| - 0.00044 19.0 0.1 0.00072 18.3 0.1 1.2 1 0 0 1 1 1 1 Ndr family PGAP1 PF07819.13 gi|121635988|ref|YP_976211.1| - 0.015 15.0 0.1 2.4 7.8 0.0 2.3 2 0 0 2 2 2 0 PGAP1-like protein ADP_PFK_GK PF04587.15 gi|121635988|ref|YP_976211.1| - 0.19 10.2 0.1 0.29 9.7 0.1 1.2 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region TetR_N PF00440.23 gi|121635989|ref|YP_976212.1| - 1.8e-15 56.4 0.1 4.4e-15 55.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family AbiEii PF08843.11 gi|121635990|ref|YP_976213.1| - 2.8e-08 34.0 2.7 4.7e-08 33.3 2.7 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system Gasdermin_C PF17708.1 gi|121635990|ref|YP_976213.1| - 0.00088 19.4 0.1 0.0015 18.7 0.1 1.4 1 0 0 1 1 1 1 Gasdermin PUB domain Hrs_helical PF12210.8 gi|121635990|ref|YP_976213.1| - 0.09 13.3 1.3 11 6.7 0.0 2.2 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate NAD_binding_3 PF03447.16 gi|121635990|ref|YP_976213.1| - 0.17 12.5 1.5 0.43 11.3 0.1 2.2 1 1 1 2 2 2 0 Homoserine dehydrogenase, NAD binding domain DUF2514 PF10721.9 gi|121635990|ref|YP_976213.1| - 1.2 9.1 9.4 0.038 14.0 2.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2514) DUF3717 PF12512.8 gi|121635991|ref|YP_976214.1| - 0.00097 19.0 0.0 0.0014 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3717) Ribosom_S30AE_C PF16321.5 gi|121635992|ref|YP_976215.1| - 2e-16 59.4 0.0 4e-10 39.2 0.0 2.2 2 0 0 2 2 2 2 Sigma 54 modulation/S30EA ribosomal protein C terminus Pilus_CpaD PF09476.10 gi|121635992|ref|YP_976215.1| - 0.082 12.6 0.7 0.39 10.4 0.7 1.9 1 1 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Pyridox_ox_2 PF12900.7 gi|121635993|ref|YP_976216.1| - 1.4e-22 80.2 2.8 1.7e-22 79.9 2.8 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_20 PF12840.7 gi|121635994|ref|YP_976217.1| - 3.5e-10 39.8 2.2 4.7e-09 36.2 0.5 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121635994|ref|YP_976217.1| - 1.6e-08 34.3 0.3 3.1e-08 33.4 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|121635994|ref|YP_976217.1| - 0.0055 16.6 1.0 0.98 9.4 0.2 2.3 1 1 1 2 2 2 2 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|121635994|ref|YP_976217.1| - 0.0087 16.2 0.2 0.017 15.3 0.0 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|121635994|ref|YP_976217.1| - 0.0098 15.8 0.0 0.016 15.0 0.0 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|121635994|ref|YP_976217.1| - 0.02 14.8 4.9 0.23 11.4 4.9 2.2 1 1 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|121635994|ref|YP_976217.1| - 0.033 14.5 0.3 1.2 9.6 0.1 2.2 1 1 1 2 2 2 0 Transcriptional regulator HTH_24 PF13412.6 gi|121635994|ref|YP_976217.1| - 0.16 11.6 0.9 0.3 10.7 0.2 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Oxidored_q6 PF01058.22 gi|121635995|ref|YP_976218.1| - 2e-24 85.9 1.2 2.4e-24 85.6 1.2 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Proton_antipo_M PF00361.20 gi|121635996|ref|YP_976219.1| - 1.5e-52 178.6 17.7 1.5e-52 178.6 17.7 1.9 1 1 1 2 2 2 1 Proton-conducting membrane transporter Anoctamin PF04547.12 gi|121635996|ref|YP_976219.1| - 0.19 10.5 0.2 0.29 9.9 0.2 1.3 1 0 0 1 1 1 0 Calcium-activated chloride channel NADHdh PF00146.21 gi|121635997|ref|YP_976220.1| - 4.9e-41 141.0 13.4 6.3e-41 140.6 13.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase TM140 PF14985.6 gi|121635998|ref|YP_976221.1| - 0.094 12.3 3.8 0.21 11.1 3.8 1.6 1 0 0 1 1 1 0 TM140 protein family Choline_transpo PF04515.12 gi|121635998|ref|YP_976221.1| - 3.3 6.8 8.3 0.66 9.1 2.1 2.2 1 1 1 2 2 2 0 Plasma-membrane choline transporter Proton_antipo_M PF00361.20 gi|121635999|ref|YP_976222.1| - 3.3e-45 154.5 20.3 3.3e-45 154.5 20.3 1.6 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|121635999|ref|YP_976222.1| - 0.00014 21.9 3.2 0.00024 21.1 0.1 2.9 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Complex1_49kDa PF00346.19 gi|121636000|ref|YP_976223.1| - 3.2e-22 78.9 0.0 4.2e-18 65.4 0.0 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|121636000|ref|YP_976223.1| - 5.8e-17 62.5 0.0 1.2e-16 61.4 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 gi|121636000|ref|YP_976223.1| - 6.5e-11 41.8 0.5 8.6e-08 31.5 0.1 2.1 2 0 0 2 2 2 2 Nickel-dependent hydrogenase Polyketide_cyc2 PF10604.9 gi|121636001|ref|YP_976224.1| - 1.3e-09 38.4 0.1 1.3e-09 38.4 0.1 1.9 2 0 0 2 2 2 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121636001|ref|YP_976224.1| - 0.014 15.6 0.3 0.2 11.9 0.3 2.3 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|121636001|ref|YP_976224.1| - 0.024 14.9 0.0 0.04 14.1 0.0 1.4 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein DPBB_1 PF03330.18 gi|121636001|ref|YP_976224.1| - 0.069 13.4 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Lytic transglycolase Methyltransf_11 PF08241.12 gi|121636002|ref|YP_976225.1| - 7.4e-20 71.4 0.0 1.1e-19 70.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636002|ref|YP_976225.1| - 1.4e-19 70.6 0.0 2.1e-19 70.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636002|ref|YP_976225.1| - 4.2e-14 53.1 0.0 6.3e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636002|ref|YP_976225.1| - 3.4e-13 49.7 0.0 3.9e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636002|ref|YP_976225.1| - 1.1e-12 48.1 0.0 1.4e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121636002|ref|YP_976225.1| - 3.9e-10 39.5 0.0 5.6e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|121636002|ref|YP_976225.1| - 9.9e-10 38.4 0.0 1.3e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|121636002|ref|YP_976225.1| - 4.4e-09 36.0 0.0 6.1e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family RrnaAD PF00398.20 gi|121636002|ref|YP_976225.1| - 2.1e-08 33.5 0.0 2.3e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_2 PF00891.18 gi|121636002|ref|YP_976225.1| - 6.5e-06 25.6 0.0 8e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_9 PF08003.11 gi|121636002|ref|YP_976225.1| - 1.3e-05 24.3 0.0 1.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|121636002|ref|YP_976225.1| - 2.3e-05 23.9 0.0 3e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|121636002|ref|YP_976225.1| - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|121636002|ref|YP_976225.1| - 0.0019 17.8 0.0 0.0025 17.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|121636002|ref|YP_976225.1| - 0.0061 15.9 0.0 0.0076 15.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|121636002|ref|YP_976225.1| - 0.025 14.5 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|121636002|ref|YP_976225.1| - 0.1 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TOBE PF03459.17 gi|121636002|ref|YP_976225.1| - 0.11 12.8 0.0 0.29 11.5 0.0 1.7 1 0 0 1 1 1 0 TOBE domain Methyltransf_4 PF02390.17 gi|121636002|ref|YP_976225.1| - 0.24 10.8 0.0 0.35 10.3 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase DUF2127 PF09900.9 gi|121636003|ref|YP_976226.1| - 9.5e-35 119.9 10.9 1.3e-34 119.5 10.9 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2127) PNP_UDP_1 PF01048.20 gi|121636004|ref|YP_976227.1| - 2.6e-45 154.5 0.2 3e-45 154.3 0.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily NUP PF06516.11 gi|121636004|ref|YP_976227.1| - 0.021 14.0 0.0 0.12 11.6 0.0 1.9 2 0 0 2 2 2 0 Purine nucleoside permease (NUP) Hydrolase PF00702.26 gi|121636005|ref|YP_976228.1| - 2e-49 168.7 4.5 2e-49 168.7 4.5 3.0 3 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 gi|121636005|ref|YP_976228.1| - 1.8e-45 154.7 3.9 1.8e-45 154.7 3.9 2.4 2 0 0 2 2 2 1 E1-E2 ATPase HMA PF00403.26 gi|121636005|ref|YP_976228.1| - 3.6e-11 43.4 0.0 8.2e-11 42.2 0.0 1.7 1 0 0 1 1 1 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|121636005|ref|YP_976228.1| - 0.00026 20.8 0.2 0.024 14.4 0.1 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121636005|ref|YP_976228.1| - 0.00084 19.8 1.3 0.018 15.5 0.2 3.4 3 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase zf-HC2 PF13490.6 gi|121636006|ref|YP_976229.1| - 5.4e-10 39.3 4.8 1e-09 38.5 4.8 1.5 1 0 0 1 1 1 1 Putative zinc-finger Phage_holin_3_6 PF07332.11 gi|121636006|ref|YP_976229.1| - 3.2 7.8 10.2 8.1 6.5 10.1 1.7 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF222 PF02720.17 gi|121636007|ref|YP_976230.1| - 3.4e-64 217.2 3.4 4.3e-64 216.9 3.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121636007|ref|YP_976230.1| - 0.015 15.5 0.1 0.015 15.5 0.1 2.2 3 0 0 3 3 3 0 HNH endonuclease DUF222 PF02720.17 gi|121636008|ref|YP_976231.1| - 2.2e-19 70.0 2.4 3.1e-19 69.6 2.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF222) PPE PF00823.19 gi|121636009|ref|YP_976232.1| - 4.1e-59 199.2 19.3 8.5e-59 198.2 19.3 1.5 1 0 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121636009|ref|YP_976232.1| - 0.21 11.9 3.3 0.51 10.6 3.3 1.7 1 0 0 1 1 1 0 Proteins of 100 residues with WXG TauD PF02668.16 gi|121636010|ref|YP_976233.1| - 7.7e-31 107.9 0.0 9.7e-31 107.5 0.0 1.0 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family FcoT PF10862.8 gi|121636011|ref|YP_976234.1| - 3e-61 205.6 0.0 3.5e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 FcoT-like thioesterase domain AMP-binding PF00501.28 gi|121636012|ref|YP_976235.1| - 1.5e-74 251.1 0.0 1.8e-74 250.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636012|ref|YP_976235.1| - 1.2e-11 45.5 0.2 3.9e-11 43.8 0.2 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 gi|121636013|ref|YP_976236.1| - 5.2e-12 45.9 0.3 5.9e-12 45.8 0.3 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site PND PF17949.1 gi|121636013|ref|YP_976236.1| - 0.15 12.3 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 FANCM pseudonuclease domain AMP-binding PF00501.28 gi|121636014|ref|YP_976237.1| - 5.2e-121 404.2 3.9 1.7e-83 280.6 0.1 2.6 2 0 0 2 2 2 2 AMP-binding enzyme Condensation PF00668.20 gi|121636014|ref|YP_976237.1| - 2.1e-87 293.7 0.0 1.7e-85 287.4 0.0 2.1 2 0 0 2 2 2 1 Condensation domain NAD_binding_4 PF07993.12 gi|121636014|ref|YP_976237.1| - 8.9e-60 202.0 0.0 1.3e-59 201.5 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein PP-binding PF00550.25 gi|121636014|ref|YP_976237.1| - 1.8e-23 82.6 0.5 1.8e-13 50.6 0.1 2.7 2 0 0 2 2 2 2 Phosphopantetheine attachment site AMP-binding_C PF13193.6 gi|121636014|ref|YP_976237.1| - 2.8e-09 37.8 2.3 1.6e-08 35.4 0.5 3.5 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Epimerase PF01370.21 gi|121636014|ref|YP_976237.1| - 8.9e-07 28.6 0.0 2e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121636014|ref|YP_976237.1| - 0.00022 20.3 0.0 0.00084 18.4 0.0 1.8 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GH3 PF03321.13 gi|121636014|ref|YP_976237.1| - 0.0031 16.4 0.0 0.062 12.1 0.0 2.4 3 0 0 3 3 3 1 GH3 auxin-responsive promoter RmlD_sub_bind PF04321.17 gi|121636014|ref|YP_976237.1| - 0.098 11.7 0.0 13 4.7 0.0 2.4 1 1 1 2 2 2 0 RmlD substrate binding domain HTH_17 PF12728.7 gi|121636014|ref|YP_976237.1| - 0.14 12.4 0.1 3.9 7.7 0.1 2.9 2 0 0 2 2 2 0 Helix-turn-helix domain Polysacc_synt_2 PF02719.15 gi|121636014|ref|YP_976237.1| - 0.25 10.5 0.0 1.2 8.2 0.0 2.1 2 1 0 2 2 2 0 Polysaccharide biosynthesis protein Caa3_CtaG PF09678.10 gi|121636015|ref|YP_976238.1| - 1.6e-80 269.9 25.5 1.6e-80 269.9 25.5 3.2 2 1 1 3 3 3 1 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CopD PF05425.13 gi|121636015|ref|YP_976238.1| - 1.7e-12 47.6 15.4 1.7e-12 47.6 15.4 5.9 3 2 3 6 6 6 1 Copper resistance protein D Hydrolase PF00702.26 gi|121636016|ref|YP_976239.1| - 1.6e-44 152.7 6.8 2.2e-44 152.3 5.1 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 gi|121636016|ref|YP_976239.1| - 8.7e-44 149.2 4.7 8.7e-44 149.2 4.7 1.9 2 0 0 2 2 2 1 E1-E2 ATPase HMA PF00403.26 gi|121636016|ref|YP_976239.1| - 3.9e-10 40.0 0.9 9.3e-10 38.8 0.3 2.1 2 0 0 2 2 2 1 Heavy-metal-associated domain HAD PF12710.7 gi|121636016|ref|YP_976239.1| - 2.7e-05 24.6 0.4 0.00011 22.7 0.4 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121636016|ref|YP_976239.1| - 0.00011 22.0 0.1 0.015 15.1 0.0 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase cNMP_binding PF00027.29 gi|121636017|ref|YP_976240.1| - 2.5e-18 65.9 0.0 6.2e-18 64.7 0.0 1.7 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain XdhC_C PF13478.6 gi|121636017|ref|YP_976240.1| - 0.031 14.8 0.0 0.081 13.4 0.0 1.7 1 0 0 1 1 1 0 XdhC Rossmann domain Cupin_2 PF07883.11 gi|121636017|ref|YP_976240.1| - 0.15 11.8 0.1 0.35 10.6 0.1 1.6 1 0 0 1 1 1 0 Cupin domain Ribosomal_L28 PF00830.19 gi|121636018|ref|YP_976241.1| - 2.1e-20 72.7 0.2 2.7e-20 72.3 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L28 family Tat PF00539.18 gi|121636018|ref|YP_976241.1| - 0.71 10.1 5.0 2 8.6 0.2 2.2 2 0 0 2 2 2 0 Transactivating regulatory protein (Tat) CobW_C PF07683.14 gi|121636019|ref|YP_976242.1| - 2e-15 56.5 0.0 3.6e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain cobW PF02492.19 gi|121636019|ref|YP_976242.1| - 1.6e-09 37.6 0.0 2.5e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain E1-E2_ATPase PF00122.20 gi|121636020|ref|YP_976243.1| - 1.6e-37 128.7 4.8 4.5e-37 127.3 4.8 1.8 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121636020|ref|YP_976243.1| - 3.5e-26 92.8 3.2 3.5e-26 92.8 3.2 3.9 4 1 0 4 4 4 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 gi|121636020|ref|YP_976243.1| - 1.3e-16 60.9 0.6 3.4e-16 59.5 0.6 1.7 1 1 0 1 1 1 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 gi|121636020|ref|YP_976243.1| - 6.5e-08 32.6 0.0 1.5e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Ldr_toxin PF13940.6 gi|121636020|ref|YP_976243.1| - 0.017 15.2 0.3 0.17 12.0 0.3 2.9 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system HAD PF12710.7 gi|121636020|ref|YP_976243.1| - 0.033 14.6 1.3 0.15 12.4 0.7 2.5 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase PE PF00934.20 gi|121636022|ref|YP_976245.1| - 8.2e-32 109.4 19.0 1.3e-31 108.8 19.0 1.3 1 0 0 1 1 1 1 PE family Rhomboid PF01694.22 gi|121636023|ref|YP_976246.1| - 8.3e-34 116.8 17.0 8.3e-34 116.8 17.0 2.3 2 1 1 3 3 3 1 Rhomboid family Shugoshin_C PF07557.11 gi|121636023|ref|YP_976246.1| - 0.15 11.9 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Shugoshin C terminus DUF1751 PF08551.10 gi|121636023|ref|YP_976246.1| - 0.34 11.5 0.1 0.34 11.5 0.1 2.8 3 1 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) Acyl_transf_3 PF01757.22 gi|121636024|ref|YP_976247.1| - 2.5e-24 86.0 23.4 3.9e-24 85.3 23.4 1.3 1 0 0 1 1 1 1 Acyltransferase family GDP_Man_Dehyd PF16363.5 gi|121636025|ref|YP_976248.1| - 2.7e-59 201.2 0.0 4.6e-59 200.5 0.0 1.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|121636025|ref|YP_976248.1| - 5.3e-47 160.3 0.0 7.1e-47 159.9 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|121636025|ref|YP_976248.1| - 5.1e-11 42.2 0.0 7.1e-11 41.7 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|121636025|ref|YP_976248.1| - 2.7e-07 30.0 0.1 0.00013 21.2 0.2 3.1 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|121636025|ref|YP_976248.1| - 1.4e-05 24.4 0.3 0.17 11.0 0.1 2.6 2 1 0 2 2 2 2 Male sterility protein B12-binding PF02310.19 gi|121636025|ref|YP_976248.1| - 0.013 15.6 0.0 0.058 13.4 0.0 2.1 2 1 0 2 2 2 0 B12 binding domain 3Beta_HSD PF01073.19 gi|121636025|ref|YP_976248.1| - 0.017 14.1 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.25 gi|121636025|ref|YP_976248.1| - 0.053 13.0 0.1 3.9 6.9 0.0 2.5 3 0 0 3 3 3 0 short chain dehydrogenase DapB_N PF01113.20 gi|121636025|ref|YP_976248.1| - 0.099 12.8 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus 3HCDH_N PF02737.18 gi|121636025|ref|YP_976248.1| - 0.12 12.2 0.0 0.25 11.2 0.0 1.5 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SIS_2 PF13580.6 gi|121636026|ref|YP_976249.1| - 1e-25 90.3 0.5 1.4e-25 89.9 0.5 1.3 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 gi|121636026|ref|YP_976249.1| - 6.1e-10 39.1 0.3 4.6e-09 36.2 0.0 2.1 2 0 0 2 2 2 1 SIS domain Hydrolase_6 PF13344.6 gi|121636027|ref|YP_976250.1| - 0.0027 17.8 0.4 0.011 15.9 0.1 2.0 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD_SAK_2 PF18143.1 gi|121636027|ref|YP_976250.1| - 0.0063 16.8 0.0 0.0098 16.2 0.0 1.3 1 1 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins Hydrolase_like PF13242.6 gi|121636027|ref|YP_976250.1| - 0.007 16.4 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 gi|121636027|ref|YP_976250.1| - 0.011 15.8 0.0 0.18 11.9 0.0 2.0 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121636027|ref|YP_976250.1| - 0.019 15.4 0.0 0.039 14.4 0.0 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 gi|121636027|ref|YP_976250.1| - 0.022 14.5 0.0 0.032 13.9 0.0 1.3 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase GHMP_kinases_N PF00288.26 gi|121636028|ref|YP_976251.1| - 2.3e-11 43.8 3.6 2.4e-11 43.7 0.8 2.5 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|121636028|ref|YP_976251.1| - 2.1e-09 37.6 0.1 2.1e-09 37.6 0.1 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal Big_10 PF17964.1 gi|121636029|ref|YP_976252.1| - 6.2e-23 81.7 0.3 8.7e-23 81.2 0.3 1.2 1 0 0 1 1 1 1 Bacterial Ig domain YkuD PF03734.14 gi|121636029|ref|YP_976252.1| - 1.6e-19 70.7 0.0 2.8e-19 70.0 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Big_5 PF13205.6 gi|121636029|ref|YP_976252.1| - 0.0026 18.4 0.2 0.0063 17.2 0.2 1.7 1 0 0 1 1 1 1 Bacterial Ig-like domain LysR_substrate PF03466.20 gi|121636030|ref|YP_976253.1| - 9.4e-26 90.5 5.5 1.5e-25 89.8 5.5 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|121636030|ref|YP_976253.1| - 1.7e-19 69.5 0.2 3.3e-19 68.6 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TPP_enzyme_N PF02776.18 gi|121636031|ref|YP_976254.1| - 5.3e-49 166.1 2.4 2.9e-48 163.7 0.1 3.1 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|121636031|ref|YP_976254.1| - 4.7e-34 117.1 0.0 8.2e-34 116.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|121636031|ref|YP_976254.1| - 1.1e-26 93.4 0.3 4.1e-26 91.6 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMP-binding PF00501.28 gi|121636032|ref|YP_976255.1| - 3.9e-81 272.8 0.1 4.9e-81 272.5 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636032|ref|YP_976255.1| - 1.2e-17 64.6 0.3 3.8e-17 63.0 0.3 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain EFG_IV PF03764.18 gi|121636033|ref|YP_976256.1| - 4.9e-41 139.3 0.0 9e-41 138.4 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV GTP_EFTU PF00009.27 gi|121636033|ref|YP_976256.1| - 1.8e-37 128.8 0.0 2.6e-37 128.3 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|121636033|ref|YP_976256.1| - 1.4e-24 85.9 0.0 5.5e-23 80.8 0.0 2.4 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|121636033|ref|YP_976256.1| - 1.7e-23 82.5 0.0 2.9e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|121636033|ref|YP_976256.1| - 7.9e-13 48.6 0.0 2.9e-12 46.8 0.0 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|121636033|ref|YP_976256.1| - 2.6e-07 30.7 0.0 7.9e-07 29.2 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase Septin PF00735.18 gi|121636033|ref|YP_976256.1| - 2.3e-05 23.8 0.0 3.5e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Septin AAA_21 PF13304.6 gi|121636033|ref|YP_976256.1| - 0.0038 17.1 0.0 0.0058 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|121636033|ref|YP_976256.1| - 0.0047 17.3 0.1 0.013 15.9 0.1 1.7 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|121636033|ref|YP_976256.1| - 0.0048 16.8 0.1 0.039 13.9 0.2 2.3 2 1 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|121636033|ref|YP_976256.1| - 0.006 16.7 0.2 0.28 11.2 0.1 2.3 1 1 1 2 2 2 1 Dynamin family ABC_tran PF00005.27 gi|121636033|ref|YP_976256.1| - 0.0083 16.6 0.0 0.017 15.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|121636033|ref|YP_976256.1| - 0.01 15.5 0.2 0.021 14.5 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain cobW PF02492.19 gi|121636033|ref|YP_976256.1| - 0.013 15.1 0.0 0.086 12.4 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 gi|121636033|ref|YP_976256.1| - 0.017 15.6 0.0 0.034 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|121636033|ref|YP_976256.1| - 0.019 14.9 0.0 0.041 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) SRPRB PF09439.10 gi|121636033|ref|YP_976256.1| - 0.023 14.1 0.0 0.051 13.0 0.0 1.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_28 PF13521.6 gi|121636033|ref|YP_976256.1| - 0.025 14.8 0.5 0.053 13.8 0.5 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121636033|ref|YP_976256.1| - 0.051 13.3 0.0 0.088 12.5 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_33 PF13671.6 gi|121636033|ref|YP_976256.1| - 0.053 13.7 0.0 0.2 11.8 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_22 PF13401.6 gi|121636033|ref|YP_976256.1| - 0.069 13.4 0.0 0.33 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|121636033|ref|YP_976256.1| - 0.086 12.2 0.1 0.15 11.4 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_30 PF13604.6 gi|121636033|ref|YP_976256.1| - 0.091 12.5 0.2 0.17 11.6 0.2 1.5 1 0 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|121636033|ref|YP_976256.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Guanylate kinase Roc PF08477.13 gi|121636033|ref|YP_976256.1| - 0.12 12.6 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 gi|121636033|ref|YP_976256.1| - 0.13 12.6 0.2 0.4 11.1 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PduV-EutP PF10662.9 gi|121636033|ref|YP_976256.1| - 0.15 11.8 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|121636033|ref|YP_976256.1| - 0.22 11.4 0.1 0.51 10.2 0.1 1.6 2 0 0 2 2 1 0 NACHT domain Putative_PNPOx PF01243.20 gi|121636034|ref|YP_976257.1| - 2.7e-18 66.0 0.1 4.3e-18 65.3 0.1 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Ribosomal_L2 PF00181.23 gi|121636034|ref|YP_976257.1| - 0.069 13.1 0.0 7 6.7 0.0 2.2 2 0 0 2 2 2 0 Ribosomal Proteins L2, RNA binding domain DUF5005 PF16396.5 gi|121636035|ref|YP_976258.1| - 0.14 10.8 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5005) RHH_1 PF01402.21 gi|121636036|ref|YP_976259.1| - 0.00064 19.6 0.3 0.0021 17.9 0.1 2.0 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family Ribosomal_S18 PF01084.20 gi|121636036|ref|YP_976259.1| - 0.14 12.4 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S18 PE PF00934.20 gi|121636037|ref|YP_976260.1| - 1.6e-37 127.7 25.0 1.6e-37 127.7 25.0 1.7 2 0 0 2 2 2 1 PE family Trypsin_2 PF13365.6 gi|121636038|ref|YP_976261.1| - 2.3e-22 80.5 10.9 2.3e-22 80.5 10.9 2.2 2 0 0 2 2 2 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|121636038|ref|YP_976261.1| - 2e-13 50.4 0.2 4.3e-13 49.4 0.2 1.6 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|121636038|ref|YP_976261.1| - 7.8e-09 35.7 3.5 1.5e-08 34.7 3.5 1.4 1 1 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 gi|121636038|ref|YP_976261.1| - 3e-08 33.4 0.2 8.4e-08 31.9 0.2 1.8 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|121636038|ref|YP_976261.1| - 1.7e-06 28.3 1.6 3.5e-06 27.3 0.3 2.2 2 0 0 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 gi|121636038|ref|YP_976261.1| - 0.00018 21.4 0.1 0.00043 20.2 0.1 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 gi|121636038|ref|YP_976261.1| - 0.016 13.9 2.8 1.3 7.5 0.1 2.1 2 0 0 2 2 2 0 Peptidase S46 Alpha-amylase PF00128.24 gi|121636039|ref|YP_976262.1| - 1.2e-76 258.4 0.0 5.5e-76 256.3 0.0 1.8 1 1 0 1 1 1 1 Alpha amylase, catalytic domain Malt_amylase_C PF16657.5 gi|121636039|ref|YP_976262.1| - 1.5e-22 79.5 0.0 2.9e-22 78.6 0.0 1.5 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain DUF3459 PF11941.8 gi|121636039|ref|YP_976262.1| - 4.3e-06 27.0 0.0 2.8e-05 24.3 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) hDGE_amylase PF14701.6 gi|121636039|ref|YP_976262.1| - 0.03 13.4 0.0 0.042 12.9 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain Mak_N_cap PF18085.1 gi|121636040|ref|YP_976263.1| - 4.9e-15 56.3 1.1 1.2e-14 55.0 1.1 1.7 1 0 0 1 1 1 1 Maltokinase N-terminal cap domain APH PF01636.23 gi|121636040|ref|YP_976263.1| - 5.6e-05 23.2 0.1 0.00013 22.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family APH_6_hur PF04655.14 gi|121636040|ref|YP_976263.1| - 0.0084 15.5 0.0 0.016 14.6 0.0 1.4 1 0 0 1 1 1 1 Aminoglycoside/hydroxyurea antibiotic resistance kinase DUF1275 PF06912.11 gi|121636041|ref|YP_976264.1| - 1.9e-26 93.2 22.5 2.2e-26 93.0 22.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) TetR_C_11 PF16859.5 gi|121636041|ref|YP_976264.1| - 0.008 16.5 0.2 0.017 15.4 0.2 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF3397 PF11877.8 gi|121636041|ref|YP_976264.1| - 0.024 14.8 1.6 0.051 13.8 1.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) Esterase PF00756.20 gi|121636042|ref|YP_976265.1| - 7.9e-73 245.2 0.7 9.2e-73 245.0 0.7 1.0 1 0 0 1 1 1 1 Putative esterase MaoC_dehydratas PF01575.19 gi|121636043|ref|YP_976266.1| - 1e-33 115.5 0.1 1.3e-33 115.2 0.1 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121636043|ref|YP_976266.1| - 1.3e-07 31.9 0.1 1.7e-07 31.4 0.1 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase Acyl-CoA_dh_1 PF00441.24 gi|121636044|ref|YP_976267.1| - 1.3e-29 103.4 7.5 1.9e-29 102.8 7.5 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636044|ref|YP_976267.1| - 4.4e-21 74.9 0.0 7.8e-21 74.1 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121636044|ref|YP_976267.1| - 9.1e-18 65.0 0.0 4.3e-17 62.8 0.0 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121636044|ref|YP_976267.1| - 2.3e-10 40.9 3.6 7.7e-10 39.2 0.8 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 gi|121636044|ref|YP_976267.1| - 0.00048 19.9 0.0 0.0012 18.6 0.0 1.7 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal Bac_luciferase PF00296.20 gi|121636045|ref|YP_976268.1| - 1e-55 189.4 7.1 1.3e-55 189.1 7.1 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Acetyltransf_1 PF00583.25 gi|121636046|ref|YP_976269.1| - 0.00033 20.9 0.0 0.00039 20.6 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121636046|ref|YP_976269.1| - 0.12 12.8 0.0 0.25 11.8 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121636046|ref|YP_976269.1| - 0.14 12.2 0.0 1.9 8.5 0.0 2.2 2 0 0 2 2 2 0 FR47-like protein TetR_N PF00440.23 gi|121636047|ref|YP_976270.1| - 4.6e-15 55.1 0.0 1.4e-14 53.6 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 gi|121636047|ref|YP_976270.1| - 0.064 14.0 0.0 0.16 12.8 0.0 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|121636047|ref|YP_976270.1| - 0.078 13.2 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GRAS PF03514.14 gi|121636047|ref|YP_976270.1| - 0.11 11.4 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 GRAS domain family p450 PF00067.22 gi|121636048|ref|YP_976271.1| - 7.8e-62 209.5 0.0 2.4e-61 207.9 0.0 1.6 1 1 0 1 1 1 1 Cytochrome P450 PMSR PF01625.21 gi|121636049|ref|YP_976272.1| - 1.9e-56 190.5 0.0 2.2e-56 190.3 0.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase SnoaL_2 PF12680.7 gi|121636050|ref|YP_976273.1| - 4.4e-08 33.7 0.2 7.9e-08 32.9 0.2 1.5 1 1 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 gi|121636050|ref|YP_976273.1| - 0.00017 21.7 0.0 0.00021 21.4 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|121636050|ref|YP_976273.1| - 0.0018 18.5 0.1 0.0025 18.1 0.1 1.4 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|121636050|ref|YP_976273.1| - 0.015 15.1 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Epimerase PF01370.21 gi|121636051|ref|YP_976274.1| - 9.9e-25 87.4 0.0 2.1e-24 86.3 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121636051|ref|YP_976274.1| - 7.8e-18 64.5 0.0 9.9e-18 64.1 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|121636051|ref|YP_976274.1| - 5.1e-17 62.4 0.2 8.1e-17 61.7 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 gi|121636051|ref|YP_976274.1| - 4.2e-15 56.0 0.0 2e-14 53.8 0.0 2.0 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|121636051|ref|YP_976274.1| - 2.8e-11 43.1 0.0 3.1e-07 29.8 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein NmrA PF05368.13 gi|121636051|ref|YP_976274.1| - 9.9e-07 28.5 0.0 1.9e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family KR PF08659.10 gi|121636051|ref|YP_976274.1| - 0.0022 18.0 0.0 2.2 8.2 0.0 2.6 2 0 0 2 2 2 2 KR domain Polysacc_synt_2 PF02719.15 gi|121636051|ref|YP_976274.1| - 0.0031 16.7 0.0 0.012 14.8 0.0 1.9 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein HcyBio PF01837.16 gi|121636051|ref|YP_976274.1| - 0.22 10.3 0.0 0.3 9.9 0.0 1.2 1 0 0 1 1 1 0 Homocysteine biosynthesis enzyme, sulfur-incorporation NTP_transf_9 PF04248.12 gi|121636052|ref|YP_976275.1| - 3.8e-30 103.6 0.7 4.6e-30 103.4 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF427) RAMA PF18755.1 gi|121636052|ref|YP_976275.1| - 0.097 13.1 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated SnoaL_2 PF12680.7 gi|121636053|ref|YP_976276.1| - 1.1e-08 35.6 0.0 1.4e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain LEH PF07858.12 gi|121636053|ref|YP_976276.1| - 0.00086 19.4 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Limonene-1,2-epoxide hydrolase catalytic domain SnoaL PF07366.12 gi|121636053|ref|YP_976276.1| - 0.0046 16.7 0.0 0.0094 15.7 0.0 1.5 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase WI12 PF07107.11 gi|121636053|ref|YP_976276.1| - 0.027 14.6 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 Wound-induced protein WI12 Voltage_CLC PF00654.20 gi|121636055|ref|YP_976278.1| - 1.4e-81 274.5 30.2 1.4e-81 274.5 30.2 2.0 2 0 0 2 2 2 2 Voltage gated chloride channel NiFe_hyd_3_EhaA PF17367.2 gi|121636055|ref|YP_976278.1| - 7.2 6.8 10.3 3.2 8.0 0.4 3.9 4 0 0 4 4 4 0 NiFe-hydrogenase-type-3 Eha complex subunit A TetR_N PF00440.23 gi|121636056|ref|YP_976279.1| - 5e-16 58.2 0.1 8.5e-16 57.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 gi|121636056|ref|YP_976279.1| - 4.9e-06 26.8 2.5 1.3e-05 25.4 2.5 1.8 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 gi|121636056|ref|YP_976279.1| - 3.2e-05 24.1 2.6 6.8e-05 23.1 2.4 1.7 1 1 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal Sigma70_r4 PF04545.16 gi|121636056|ref|YP_976279.1| - 0.034 13.7 0.0 0.066 12.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 LCM PF04072.14 gi|121636057|ref|YP_976280.1| - 1e-61 208.2 0.5 1.7e-61 207.5 0.5 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Methyltransf_19 PF04672.12 gi|121636057|ref|YP_976280.1| - 0.0055 16.2 0.1 0.0085 15.6 0.1 1.3 1 0 0 1 1 1 1 S-adenosyl methyltransferase LCM PF04072.14 gi|121636058|ref|YP_976281.1| - 2.6e-62 210.1 0.5 3.6e-62 209.7 0.5 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Aldedh PF00171.22 gi|121636059|ref|YP_976282.1| - 3.2e-95 319.3 0.0 4e-95 319.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family adh_short PF00106.25 gi|121636060|ref|YP_976283.1| - 1e-37 129.5 1.6 1.8e-37 128.7 1.6 1.3 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636060|ref|YP_976283.1| - 1.3e-30 106.7 2.4 3.8e-30 105.2 2.4 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636060|ref|YP_976283.1| - 1.4e-21 77.3 0.8 2e-21 76.7 0.8 1.2 1 0 0 1 1 1 1 KR domain ADH_zinc_N PF00107.26 gi|121636061|ref|YP_976284.1| - 2.8e-26 92.0 1.3 2.8e-26 92.0 1.3 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121636061|ref|YP_976284.1| - 2.9e-13 51.0 0.1 4.4e-12 47.2 0.0 2.6 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121636061|ref|YP_976284.1| - 3.1e-09 36.7 0.0 1.7e-08 34.3 0.0 2.1 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 gi|121636061|ref|YP_976284.1| - 0.014 14.7 1.9 0.022 14.0 1.9 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain PE-PPE PF08237.11 gi|121636063|ref|YP_976286.1| - 6.7e-70 235.2 2.0 1.5e-69 234.0 2.0 1.5 1 0 0 1 1 1 1 PE-PPE domain PE PF00934.20 gi|121636063|ref|YP_976286.1| - 2.5e-30 104.6 20.3 5.1e-30 103.7 20.3 1.5 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636063|ref|YP_976286.1| - 0.23 11.9 12.1 0.54 10.7 12.1 1.6 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PE-PPE PF08237.11 gi|121636064|ref|YP_976287.1| - 8.8e-69 231.5 0.4 2e-68 230.4 0.4 1.6 1 0 0 1 1 1 1 PE-PPE domain Y_phosphatase3 PF13350.6 gi|121636065|ref|YP_976288.1| - 2.4e-58 197.9 0.0 2.7e-58 197.7 0.0 1.0 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase2 PF03162.13 gi|121636065|ref|YP_976288.1| - 0.013 15.1 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Y_phosphatase PF00102.27 gi|121636065|ref|YP_976288.1| - 0.026 14.1 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase DSPc PF00782.20 gi|121636065|ref|YP_976288.1| - 0.14 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Acyl-CoA_dh_1 PF00441.24 gi|121636066|ref|YP_976289.1| - 3.3e-41 141.0 4.2 4.9e-41 140.4 4.2 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121636066|ref|YP_976289.1| - 4.5e-19 69.0 6.0 7.9e-19 68.3 6.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636066|ref|YP_976289.1| - 7.4e-19 67.8 0.0 1.3e-18 67.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121636066|ref|YP_976289.1| - 2e-08 34.9 0.1 6.1e-08 33.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain DUF4169 PF13770.6 gi|121636066|ref|YP_976289.1| - 0.021 15.1 0.0 0.055 13.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4169) AlaDh_PNT_C PF01262.21 gi|121636067|ref|YP_976290.1| - 4.7e-66 222.1 0.6 6.5e-66 221.7 0.6 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 gi|121636067|ref|YP_976290.1| - 9.8e-39 132.8 0.3 2.7e-38 131.4 0.1 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, N-terminal domain 2-Hacid_dh_C PF02826.19 gi|121636067|ref|YP_976290.1| - 1.7e-05 24.3 0.0 0.0081 15.5 0.0 2.3 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 gi|121636067|ref|YP_976290.1| - 0.0045 17.0 0.8 0.02 14.9 0.4 2.3 2 1 0 2 2 2 1 Zinc-binding dehydrogenase NAD_binding_2 PF03446.15 gi|121636067|ref|YP_976290.1| - 0.0097 16.1 0.3 0.044 14.0 0.3 2.2 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 gi|121636067|ref|YP_976290.1| - 0.049 13.5 4.0 0.22 11.4 0.1 2.8 2 1 1 3 3 3 0 NAD(P)H-binding PNTB_4TM PF12769.7 gi|121636068|ref|YP_976291.1| - 3.4e-31 107.5 8.5 4e-31 107.3 8.5 1.0 1 0 0 1 1 1 1 4TM region of pyridine nucleotide transhydrogenase, mitoch TrbC PF04956.13 gi|121636068|ref|YP_976291.1| - 0.014 15.6 4.7 0.019 15.2 4.7 1.3 1 0 0 1 1 1 0 TrbC/VIRB2 family Bax1-I PF01027.20 gi|121636068|ref|YP_976291.1| - 0.024 14.4 4.2 0.029 14.2 4.2 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF2627 PF11118.8 gi|121636068|ref|YP_976291.1| - 6.6 7.4 7.5 35 5.1 7.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2627) PNTB PF02233.16 gi|121636069|ref|YP_976292.1| - 1e-173 578.5 27.8 1.2e-173 578.3 27.8 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit DUF3830 PF12903.7 gi|121636069|ref|YP_976292.1| - 0.082 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3830) Asparaginase_C PF17763.1 gi|121636069|ref|YP_976292.1| - 1.9 8.7 8.9 3.2 8.0 2.8 3.1 2 1 1 3 3 3 0 Glutaminase/Asparaginase C-terminal domain TetR_C_24 PF17932.1 gi|121636070|ref|YP_976293.1| - 1.1e-21 77.2 0.2 1.7e-21 76.6 0.2 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121636070|ref|YP_976293.1| - 3e-13 49.3 0.2 9.2e-13 47.8 0.2 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_5 PF08360.11 gi|121636070|ref|YP_976293.1| - 0.00017 21.8 0.0 0.00025 21.2 0.0 1.3 1 0 0 1 1 1 1 QacR-like protein, C-terminal region HTH_Tnp_1_2 PF13022.6 gi|121636070|ref|YP_976293.1| - 0.016 15.4 0.0 0.11 12.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix of insertion element transposase TetR_C_27 PF17935.1 gi|121636070|ref|YP_976293.1| - 0.028 14.5 0.2 0.07 13.2 0.1 1.9 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|121636070|ref|YP_976293.1| - 0.088 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PE-PPE PF08237.11 gi|121636071|ref|YP_976294.1| - 4.2e-70 235.8 1.7 4.2e-70 235.8 1.7 1.6 2 0 0 2 2 2 1 PE-PPE domain PE PF00934.20 gi|121636071|ref|YP_976294.1| - 4.9e-31 106.9 19.8 9.9e-31 105.9 19.8 1.5 1 0 0 1 1 1 1 PE family PE-PPE PF08237.11 gi|121636072|ref|YP_976295.1| - 8.5e-79 264.3 3.4 1.3e-78 263.6 3.4 1.3 1 0 0 1 1 1 1 PE-PPE domain PE PF00934.20 gi|121636072|ref|YP_976295.1| - 4.6e-31 107.0 18.8 8.1e-31 106.2 18.8 1.4 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636072|ref|YP_976295.1| - 0.0027 18.1 13.9 0.0041 17.6 13.9 1.3 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm Cutinase PF01083.22 gi|121636072|ref|YP_976295.1| - 0.0088 16.0 0.6 0.024 14.6 0.0 1.9 2 0 0 2 2 2 1 Cutinase FAD-oxidase_C PF02913.19 gi|121636073|ref|YP_976296.1| - 6.5e-55 186.5 0.0 9.7e-55 185.9 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|121636073|ref|YP_976296.1| - 3.1e-34 117.7 5.9 5.8e-34 116.8 5.9 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_5 PF00941.21 gi|121636073|ref|YP_976296.1| - 0.00038 20.2 0.4 0.0007 19.4 0.4 1.4 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase ADH_N PF08240.12 gi|121636074|ref|YP_976297.1| - 8.3e-26 90.0 1.5 1.9e-25 88.9 1.5 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121636074|ref|YP_976297.1| - 1.9e-16 60.2 0.1 3.9e-16 59.2 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|121636074|ref|YP_976297.1| - 7.8e-07 28.8 0.1 1.6e-06 27.8 0.1 1.4 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|121636074|ref|YP_976297.1| - 3.1e-06 28.3 0.0 6.7e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 4HBT PF03061.22 gi|121636075|ref|YP_976298.1| - 6.2e-14 52.1 0.0 9.7e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|121636075|ref|YP_976298.1| - 7.4e-11 42.6 0.0 9.7e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|121636075|ref|YP_976298.1| - 3e-05 23.4 0.0 0.0061 15.9 0.1 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase Polyketide_cyc PF03364.20 gi|121636076|ref|YP_976299.1| - 5.8e-13 49.2 0.0 8.6e-13 48.6 0.0 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|121636076|ref|YP_976299.1| - 3.2e-07 30.7 0.1 4.1e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF1997 PF09366.10 gi|121636076|ref|YP_976299.1| - 0.047 13.8 0.2 0.065 13.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) FCD PF07729.12 gi|121636077|ref|YP_976300.1| - 2.5e-20 73.2 5.6 4.8e-20 72.2 5.6 1.4 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 gi|121636077|ref|YP_976300.1| - 1.4e-13 50.2 0.2 3e-13 49.2 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family RtcR PF06956.11 gi|121636077|ref|YP_976300.1| - 0.066 12.6 0.0 0.14 11.5 0.0 1.5 2 0 0 2 2 2 0 Regulator of RNA terminal phosphate cyclase HTH_DeoR PF08220.12 gi|121636077|ref|YP_976300.1| - 0.08 12.7 0.1 0.3 10.9 0.0 2.0 3 0 0 3 3 3 0 DeoR-like helix-turn-helix domain HTH_41 PF14502.6 gi|121636077|ref|YP_976300.1| - 0.081 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain AMP-binding PF00501.28 gi|121636078|ref|YP_976301.1| - 1e-103 347.2 0.0 1.2e-103 347.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636078|ref|YP_976301.1| - 5.6e-18 65.7 0.1 1.8e-17 64.1 0.1 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MlaE PF02405.16 gi|121636079|ref|YP_976302.1| - 2.6e-56 190.6 25.3 3.2e-56 190.4 25.3 1.1 1 0 0 1 1 1 1 Permease MlaE MlaE PF02405.16 gi|121636080|ref|YP_976303.1| - 3e-50 170.8 25.8 3.8e-50 170.5 25.8 1.1 1 0 0 1 1 1 1 Permease MlaE OppC_N PF12911.7 gi|121636080|ref|YP_976303.1| - 4.9 7.2 8.5 0.48 10.4 0.1 3.1 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C Mce4_CUP1 PF11887.8 gi|121636081|ref|YP_976304.1| - 1.2e-109 365.7 0.2 1.6e-109 365.3 0.2 1.2 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative MlaD PF02470.20 gi|121636081|ref|YP_976304.1| - 6e-14 52.1 0.1 1.2e-13 51.2 0.1 1.5 1 0 0 1 1 1 1 MlaD protein MlaD PF02470.20 gi|121636082|ref|YP_976305.1| - 6e-19 68.1 0.2 1.2e-18 67.2 0.2 1.5 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636082|ref|YP_976305.1| - 1.4e-06 28.0 4.4 1.8e-06 27.6 3.8 1.3 1 1 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative FAM92 PF06730.11 gi|121636082|ref|YP_976305.1| - 0.0036 16.8 0.0 0.0051 16.3 0.0 1.1 1 0 0 1 1 1 1 FAM92 protein DUF745 PF05335.13 gi|121636082|ref|YP_976305.1| - 0.029 14.1 0.1 0.04 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DASH_Dad2 PF08654.10 gi|121636082|ref|YP_976305.1| - 0.033 14.6 0.4 7.2 7.1 0.2 2.3 1 1 1 2 2 2 0 DASH complex subunit Dad2 SIKE PF05769.11 gi|121636082|ref|YP_976305.1| - 0.076 12.9 0.5 0.1 12.5 0.5 1.1 1 0 0 1 1 1 0 SIKE family Hemagglutinin PF00509.18 gi|121636082|ref|YP_976305.1| - 0.11 10.9 0.4 0.14 10.6 0.4 1.2 1 0 0 1 1 1 0 Haemagglutinin Sipho_Gp157 PF05565.11 gi|121636082|ref|YP_976305.1| - 0.18 11.8 0.1 0.31 11.1 0.1 1.3 1 0 0 1 1 1 0 Siphovirus Gp157 DASH_Dad1 PF08649.10 gi|121636082|ref|YP_976305.1| - 0.2 11.9 0.3 0.83 9.9 0.3 2.0 2 0 0 2 2 2 0 DASH complex subunit Dad1 MlaD PF02470.20 gi|121636083|ref|YP_976306.1| - 1.8e-11 44.1 0.1 3.1e-11 43.4 0.1 1.4 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636083|ref|YP_976306.1| - 6.9e-06 25.7 1.6 3.3e-05 23.5 1.7 1.9 1 1 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative DUF948 PF06103.11 gi|121636083|ref|YP_976306.1| - 0.0036 17.5 0.5 0.14 12.4 0.2 2.3 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 gi|121636083|ref|YP_976306.1| - 0.016 15.7 1.2 3 8.4 0.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein PLAC9 PF15205.6 gi|121636083|ref|YP_976306.1| - 0.067 13.6 0.0 0.33 11.4 0.0 2.2 1 0 0 1 1 1 0 Placenta-specific protein 9 DUF1664 PF07889.12 gi|121636083|ref|YP_976306.1| - 0.082 13.0 0.1 0.28 11.2 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 gi|121636083|ref|YP_976306.1| - 0.77 9.8 5.2 2.2 8.3 5.0 1.7 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MlaD PF02470.20 gi|121636084|ref|YP_976307.1| - 4.4e-13 49.3 0.2 1.7e-12 47.4 0.0 2.0 2 0 0 2 2 2 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636084|ref|YP_976307.1| - 1.1e-06 28.3 1.6 2.1e-06 27.4 1.6 1.4 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative RIX1 PF08167.12 gi|121636084|ref|YP_976307.1| - 0.02 14.7 0.1 0.033 13.9 0.1 1.4 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Baculo_PEP_C PF04513.12 gi|121636084|ref|YP_976307.1| - 0.28 11.2 8.0 5.7 7.0 0.5 2.4 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MlaD PF02470.20 gi|121636085|ref|YP_976308.1| - 1.6e-11 44.3 0.0 3e-11 43.4 0.0 1.5 1 0 0 1 1 1 1 MlaD protein Baculo_PEP_C PF04513.12 gi|121636085|ref|YP_976308.1| - 0.011 15.8 2.1 0.093 12.8 0.5 2.3 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Mce4_CUP1 PF11887.8 gi|121636085|ref|YP_976308.1| - 0.012 15.1 0.7 0.022 14.2 0.6 1.5 1 1 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative TMEM132 PF16070.5 gi|121636085|ref|YP_976308.1| - 0.077 12.3 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein family 132 DUF948 PF06103.11 gi|121636085|ref|YP_976308.1| - 0.15 12.3 0.1 0.41 10.9 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) LPAM_2 PF13627.6 gi|121636085|ref|YP_976308.1| - 0.17 11.8 1.6 0.45 10.4 1.6 1.8 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site MlaD PF02470.20 gi|121636086|ref|YP_976309.1| - 3.6e-17 62.4 0.2 6.4e-17 61.6 0.2 1.4 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636086|ref|YP_976309.1| - 7.2e-05 22.4 0.7 0.00012 21.7 0.7 1.2 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative DUF948 PF06103.11 gi|121636086|ref|YP_976309.1| - 0.0011 19.2 0.1 1.6 9.1 0.0 2.5 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) RDD PF06271.12 gi|121636088|ref|YP_976311.1| - 1.6e-16 60.8 8.3 3.9e-16 59.5 8.3 1.7 1 0 0 1 1 1 1 RDD family NAGPA PF09992.9 gi|121636091|ref|YP_976314.1| - 1.6e-08 34.9 0.6 6.5e-08 33.0 0.6 1.9 1 1 0 1 1 1 1 Phosphodiester glycosidase DUF3533 PF12051.8 gi|121636092|ref|YP_976315.1| - 5.2e-46 157.3 0.2 6.2e-46 157.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3533) ABC2_membrane_3 PF12698.7 gi|121636092|ref|YP_976315.1| - 6.3e-16 58.4 11.5 2e-15 56.8 11.5 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|121636092|ref|YP_976315.1| - 0.005 16.3 22.2 0.005 16.3 22.2 3.2 3 1 0 3 3 3 1 ABC-2 type transporter Pirin PF02678.16 gi|121636093|ref|YP_976316.1| - 7.5e-38 128.8 0.3 1.2e-37 128.2 0.3 1.2 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 gi|121636093|ref|YP_976316.1| - 1.8e-07 31.2 0.0 3.7e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 gi|121636093|ref|YP_976316.1| - 0.016 14.9 0.4 1.2 8.9 0.1 2.5 2 0 0 2 2 2 0 Cupin domain Sigma70_r2 PF04542.14 gi|121636094|ref|YP_976317.1| - 2.1e-20 72.3 2.1 2.5e-20 72.0 0.4 2.0 2 1 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121636094|ref|YP_976317.1| - 9.5e-15 54.0 0.2 2.1e-14 52.9 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_2 PF12680.7 gi|121636094|ref|YP_976317.1| - 1.8e-08 34.9 0.4 6.5e-08 33.2 0.2 2.1 2 0 0 2 2 2 1 SnoaL-like domain Sigma70_r4 PF04545.16 gi|121636094|ref|YP_976317.1| - 1.1e-06 28.0 0.2 1.9e-06 27.3 0.2 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_4 PF13577.6 gi|121636094|ref|YP_976317.1| - 3.5e-06 27.2 0.0 6e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.20 gi|121636094|ref|YP_976317.1| - 0.011 16.3 0.0 0.022 15.3 0.0 1.5 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain SnoaL_3 PF13474.6 gi|121636094|ref|YP_976317.1| - 0.019 15.2 0.0 0.045 14.0 0.0 1.7 2 0 0 2 2 2 0 SnoaL-like domain Acetyltransf_6 PF13480.7 gi|121636094|ref|YP_976317.1| - 0.13 12.5 2.6 0.12 12.5 0.5 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Tetradecapep PF08187.11 gi|121636094|ref|YP_976317.1| - 0.39 10.9 1.3 3.6 7.8 0.1 2.5 2 0 0 2 2 2 0 Myoactive tetradecapeptides family Hydrolase_4 PF12146.8 gi|121636095|ref|YP_976318.1| - 1.9e-79 266.3 0.1 2.1e-79 266.1 0.1 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121636095|ref|YP_976318.1| - 8.3e-16 59.3 7.1 1.1e-15 58.9 7.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121636095|ref|YP_976318.1| - 2.4e-13 50.3 0.2 9.5e-10 38.5 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121636095|ref|YP_976318.1| - 1.5e-05 24.6 0.1 0.018 14.5 0.0 2.6 2 1 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 gi|121636095|ref|YP_976318.1| - 0.00011 22.1 0.0 0.57 9.9 0.0 2.6 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase DLH PF01738.18 gi|121636095|ref|YP_976318.1| - 0.00014 21.5 0.0 0.015 14.9 0.0 2.7 2 1 0 2 2 2 1 Dienelactone hydrolase family Esterase PF00756.20 gi|121636095|ref|YP_976318.1| - 0.0065 16.1 0.1 0.012 15.3 0.0 1.4 2 0 0 2 2 2 1 Putative esterase PAF-AH_p_II PF03403.13 gi|121636095|ref|YP_976318.1| - 0.052 12.1 0.2 0.19 10.2 0.0 1.8 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II FSH1 PF03959.13 gi|121636095|ref|YP_976318.1| - 0.19 11.4 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 gi|121636095|ref|YP_976318.1| - 0.2 11.8 0.1 1.6 8.9 0.0 2.1 2 0 0 2 2 2 0 TAP-like protein DUF2786 PF10979.8 gi|121636096|ref|YP_976319.1| - 2.4e-13 49.7 0.9 5.1e-13 48.7 0.9 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2786) Glyco_hydro_3_C PF01915.22 gi|121636098|ref|YP_976321.1| - 1.2e-54 185.3 0.0 2.5e-54 184.3 0.0 1.5 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 gi|121636098|ref|YP_976321.1| - 8e-47 160.2 0.0 1.2e-46 159.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 gi|121636098|ref|YP_976321.1| - 9.9e-17 60.8 0.0 1.9e-16 59.9 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain Methyltransf_3 PF01596.17 gi|121636099|ref|YP_976322.1| - 4.7e-33 114.2 0.0 5.8e-33 113.9 0.0 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|121636099|ref|YP_976322.1| - 4.3e-18 66.3 0.0 7.3e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|121636099|ref|YP_976322.1| - 3.6e-08 33.4 0.1 5.7e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|121636099|ref|YP_976322.1| - 1.3e-07 31.6 0.0 1.8e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636099|ref|YP_976322.1| - 1.4e-06 28.9 0.0 2.8e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|121636099|ref|YP_976322.1| - 0.00068 19.4 0.0 0.00086 19.0 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Cons_hypoth95 PF03602.15 gi|121636099|ref|YP_976322.1| - 0.0051 16.5 0.0 0.0059 16.3 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|121636099|ref|YP_976322.1| - 0.052 13.5 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121636099|ref|YP_976322.1| - 0.18 11.1 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 gi|121636099|ref|YP_976322.1| - 0.22 11.1 0.0 0.29 10.7 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase SPW PF03779.14 gi|121636100|ref|YP_976323.1| - 9.7e-34 114.7 26.6 8.6e-18 63.7 13.6 2.1 2 0 0 2 2 2 2 SPW repeat PHBC_N PF12551.8 gi|121636100|ref|YP_976323.1| - 0.017 14.8 0.6 0.059 13.2 0.6 1.9 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase N terminal ILVD_EDD PF00920.21 gi|121636101|ref|YP_976324.1| - 1.4e-206 687.1 0.6 1.6e-206 686.9 0.6 1.0 1 0 0 1 1 1 1 Dehydratase family Trns_repr_metal PF02583.17 gi|121636102|ref|YP_976325.1| - 5.4e-31 106.8 0.3 6.4e-31 106.5 0.3 1.0 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor MFS_1 PF07690.16 gi|121636103|ref|YP_976326.1| - 3e-31 108.6 56.4 4.7e-22 78.4 26.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|121636103|ref|YP_976326.1| - 0.00098 18.5 38.7 0.00098 18.5 38.7 1.6 1 1 1 2 2 2 1 Uncharacterised MFS-type transporter YbfB Big_10 PF17964.1 gi|121636104|ref|YP_976327.1| - 2e-23 83.3 0.0 3.7e-23 82.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial Ig domain YkuD PF03734.14 gi|121636104|ref|YP_976327.1| - 6.1e-19 68.9 0.2 9.8e-19 68.2 0.2 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain DUF5071 PF16804.5 gi|121636105|ref|YP_976328.1| - 0.14 12.4 0.1 0.4 11.0 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5071) ABC_membrane PF00664.23 gi|121636106|ref|YP_976329.1| - 4.1e-65 220.1 9.1 2.1e-37 129.3 0.1 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 gi|121636106|ref|YP_976329.1| - 3.4e-60 202.5 0.0 1.5e-29 103.2 0.0 2.3 2 0 0 2 2 2 2 ABC transporter Zeta_toxin PF06414.12 gi|121636106|ref|YP_976329.1| - 1.5e-10 40.7 0.2 0.0011 18.2 0.0 3.5 4 0 0 4 4 4 2 Zeta toxin AAA_16 PF13191.6 gi|121636106|ref|YP_976329.1| - 8e-07 29.6 4.3 0.0084 16.5 0.2 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|121636106|ref|YP_976329.1| - 3e-06 26.9 0.5 0.034 13.9 0.0 2.8 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.19 gi|121636106|ref|YP_976329.1| - 6.6e-06 25.7 0.0 0.95 8.9 0.0 4.0 2 2 1 4 4 4 1 RecF/RecN/SMC N terminal domain ABC_membrane_3 PF13748.6 gi|121636106|ref|YP_976329.1| - 1.2e-05 24.7 18.3 0.015 14.6 2.8 2.9 2 1 0 2 2 2 2 ABC transporter transmembrane region AAA_33 PF13671.6 gi|121636106|ref|YP_976329.1| - 4.5e-05 23.6 2.6 0.18 11.9 0.2 3.3 3 1 0 3 3 3 2 AAA domain RsgA_GTPase PF03193.16 gi|121636106|ref|YP_976329.1| - 4.7e-05 23.4 0.0 0.016 15.1 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 gi|121636106|ref|YP_976329.1| - 9.4e-05 22.7 0.6 0.52 10.6 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_30 PF13604.6 gi|121636106|ref|YP_976329.1| - 0.00018 21.3 4.1 0.17 11.6 0.7 3.7 3 1 0 3 3 3 2 AAA domain Ploopntkinase3 PF18751.1 gi|121636106|ref|YP_976329.1| - 0.00036 20.5 0.2 0.093 12.6 0.0 3.1 3 0 0 3 3 3 1 P-loop Nucleotide Kinase3 MMR_HSR1 PF01926.23 gi|121636106|ref|YP_976329.1| - 0.00064 19.8 0.1 1.5 8.9 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|121636106|ref|YP_976329.1| - 0.0013 18.4 7.4 0.071 12.7 0.0 3.4 4 0 0 4 4 3 2 AAA domain AAA_28 PF13521.6 gi|121636106|ref|YP_976329.1| - 0.0019 18.5 2.4 1.1 9.5 0.4 2.9 2 1 0 2 2 2 2 AAA domain T2SSE PF00437.20 gi|121636106|ref|YP_976329.1| - 0.0019 17.3 0.0 0.83 8.6 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA PF00004.29 gi|121636106|ref|YP_976329.1| - 0.0027 18.1 0.1 2 8.8 0.0 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|121636106|ref|YP_976329.1| - 0.0028 17.6 0.3 0.78 9.6 0.1 2.7 2 0 0 2 2 2 1 NTPase NACHT PF05729.12 gi|121636106|ref|YP_976329.1| - 0.0037 17.2 0.2 3.9 7.3 0.0 2.8 2 0 0 2 2 2 1 NACHT domain AAA_18 PF13238.6 gi|121636106|ref|YP_976329.1| - 0.0045 17.5 0.1 1.5 9.4 0.1 2.4 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|121636106|ref|YP_976329.1| - 0.0047 16.2 1.2 1.2 8.2 0.0 2.8 3 0 0 3 3 3 1 NB-ARC domain IstB_IS21 PF01695.17 gi|121636106|ref|YP_976329.1| - 0.0056 16.4 0.3 7.2 6.3 0.0 3.3 4 0 0 4 4 4 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|121636106|ref|YP_976329.1| - 0.0068 16.4 0.1 5.8 6.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|121636106|ref|YP_976329.1| - 0.0068 15.9 0.1 0.25 10.8 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_21 PF13304.6 gi|121636106|ref|YP_976329.1| - 0.0069 16.2 4.2 1.5 8.5 0.1 3.9 2 2 2 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 gi|121636106|ref|YP_976329.1| - 0.0096 15.3 0.1 2.8 7.2 0.0 2.6 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_24 PF13479.6 gi|121636106|ref|YP_976329.1| - 0.013 15.3 0.0 1.3 8.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|121636106|ref|YP_976329.1| - 0.014 15.0 0.1 3.5 7.2 0.0 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF87 PF01935.17 gi|121636106|ref|YP_976329.1| - 0.015 15.4 0.7 3.8 7.5 0.1 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_17 PF13207.6 gi|121636106|ref|YP_976329.1| - 0.021 15.3 0.6 2.7 8.4 0.1 2.5 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|121636106|ref|YP_976329.1| - 0.021 14.2 0.1 3.5 7.0 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Viral_helicase1 PF01443.18 gi|121636106|ref|YP_976329.1| - 0.025 14.3 0.2 7.8 6.2 0.1 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase MeaB PF03308.16 gi|121636106|ref|YP_976329.1| - 0.029 13.3 0.4 1.7 7.6 0.0 2.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 gi|121636106|ref|YP_976329.1| - 0.04 14.3 0.0 7 7.1 0.0 2.4 2 0 0 2 2 2 0 RNA helicase ATP_bind_1 PF03029.17 gi|121636106|ref|YP_976329.1| - 0.046 13.5 0.7 8.9 6.0 0.1 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein APS_kinase PF01583.20 gi|121636106|ref|YP_976329.1| - 0.05 13.5 0.1 10 6.0 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase G-alpha PF00503.20 gi|121636106|ref|YP_976329.1| - 0.057 12.6 0.0 0.53 9.4 0.0 2.0 2 0 0 2 2 2 0 G-protein alpha subunit AAA_8 PF12780.7 gi|121636106|ref|YP_976329.1| - 0.075 12.3 0.1 9.8 5.4 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region D4 AAA_23 PF13476.6 gi|121636106|ref|YP_976329.1| - 0.11 12.9 0.2 1.2 9.6 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|121636106|ref|YP_976329.1| - 0.21 10.5 0.0 2.9 6.7 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain CytB6-F_Fe-S PF08802.10 gi|121636106|ref|YP_976329.1| - 0.71 9.9 3.1 21 5.2 0.1 3.5 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit GerE PF00196.19 gi|121636107|ref|YP_976330.1| - 1.7e-13 49.9 0.3 3.6e-13 48.8 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 gi|121636107|ref|YP_976330.1| - 0.00012 21.8 0.1 0.00045 19.9 0.1 2.1 1 1 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|121636107|ref|YP_976330.1| - 0.00072 19.5 0.2 0.0023 17.9 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_38 PF13936.6 gi|121636107|ref|YP_976330.1| - 0.022 14.5 0.0 0.052 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain GcrA PF07750.11 gi|121636107|ref|YP_976330.1| - 0.023 15.1 0.1 0.044 14.2 0.1 1.5 1 1 0 1 1 1 0 GcrA cell cycle regulator Sigma70_r4 PF04545.16 gi|121636107|ref|YP_976330.1| - 0.04 13.4 0.1 0.084 12.4 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 EF-hand_11 PF08976.11 gi|121636107|ref|YP_976330.1| - 0.079 13.8 0.0 0.18 12.7 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain TetR_N PF00440.23 gi|121636108|ref|YP_976331.1| - 1.5e-07 31.0 0.0 3.7e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_13 PF16925.5 gi|121636108|ref|YP_976331.1| - 0.00049 20.0 0.0 0.00081 19.3 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Molybdopterin PF00384.22 gi|121636109|ref|YP_976332.1| - 2e-30 106.1 0.0 3.1e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|121636109|ref|YP_976332.1| - 6e-15 55.2 0.1 1.1e-14 54.4 0.1 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|121636109|ref|YP_976332.1| - 4.2e-10 39.5 0.6 7.5e-10 38.6 0.6 1.4 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Peptidase_M13_N PF05649.13 gi|121636110|ref|YP_976333.1| - 2.5e-98 330.2 0.0 3.3e-98 329.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M13 Peptidase_M13 PF01431.21 gi|121636110|ref|YP_976333.1| - 3.4e-81 271.7 0.0 1.3e-80 269.8 0.0 1.9 2 0 0 2 2 2 1 Peptidase family M13 Peptidase_M48 PF01435.18 gi|121636110|ref|YP_976333.1| - 0.014 15.2 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 Peptidase family M48 Glyco_transf_18 PF15024.6 gi|121636110|ref|YP_976333.1| - 0.21 10.2 0.0 0.29 9.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 18 DUF2567 PF10821.8 gi|121636111|ref|YP_976334.1| - 0.042 13.9 0.4 0.07 13.2 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) ABC_membrane PF00664.23 gi|121636112|ref|YP_976335.1| - 1.1 8.9 3.9 2.4 7.7 3.9 1.6 1 0 0 1 1 1 0 ABC transporter transmembrane region HTH_3 PF01381.22 gi|121636113|ref|YP_976336.1| - 0.0025 17.9 0.1 0.021 14.9 0.0 2.3 2 1 1 3 3 3 1 Helix-turn-helix HTH_31 PF13560.6 gi|121636113|ref|YP_976336.1| - 0.0026 18.1 2.6 0.014 15.8 1.0 2.6 1 1 1 2 2 2 1 Helix-turn-helix domain Myb_DNA-bind_4 PF13837.6 gi|121636113|ref|YP_976336.1| - 0.12 12.8 0.0 0.24 11.8 0.0 1.5 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain MMPL PF03176.15 gi|121636114|ref|YP_976337.1| - 7.9e-73 245.3 38.4 3.5e-37 128.1 14.4 2.3 2 0 0 2 2 2 2 MMPL family ACR_tran PF00873.19 gi|121636114|ref|YP_976337.1| - 9.9e-07 26.8 13.0 9.9e-07 26.8 13.0 2.6 3 0 0 3 3 3 2 AcrB/AcrD/AcrF family Sterol-sensing PF12349.8 gi|121636114|ref|YP_976337.1| - 0.00084 19.2 25.9 0.017 14.9 8.1 2.7 2 1 1 3 3 3 2 Sterol-sensing domain of SREBP cleavage-activation MHB PF16525.5 gi|121636115|ref|YP_976338.1| - 1.9e-26 92.1 0.1 2.4e-26 91.8 0.1 1.1 1 0 0 1 1 1 1 Haemophore, haem-binding LPG_synthase_TM PF03706.13 gi|121636116|ref|YP_976339.1| - 7.9e-37 127.4 42.4 9.6e-37 127.1 42.4 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region AI-2E_transport PF01594.16 gi|121636117|ref|YP_976340.1| - 6.5e-81 272.0 31.3 7.3e-81 271.8 31.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF3742 PF12553.8 gi|121636117|ref|YP_976340.1| - 0.061 13.4 0.4 0.061 13.4 0.4 3.6 5 1 0 5 5 5 0 Protein of unknown function (DUF3742) HemY_N PF07219.13 gi|121636117|ref|YP_976340.1| - 0.15 12.2 0.1 0.15 12.2 0.1 4.8 4 1 1 5 5 5 0 HemY protein N-terminus XK-related PF09815.9 gi|121636117|ref|YP_976340.1| - 1.5 7.8 8.5 0.33 10.0 3.5 2.1 2 0 0 2 2 2 0 XK-related protein MMPL PF03176.15 gi|121636118|ref|YP_976341.1| - 2.7e-66 223.8 28.8 7e-39 133.7 4.9 2.7 2 1 0 2 2 2 2 MMPL family NYN PF01936.18 gi|121636119|ref|YP_976342.1| - 3.5e-07 30.8 0.0 4.8e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 NYN domain Methyltransf_4 PF02390.17 gi|121636120|ref|YP_976343.1| - 2e-54 183.6 0.0 2.4e-54 183.4 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_25 PF13649.6 gi|121636120|ref|YP_976343.1| - 0.00055 20.6 0.0 0.00095 19.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|121636120|ref|YP_976343.1| - 0.00058 19.1 0.0 0.0008 18.6 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_23 PF13489.6 gi|121636120|ref|YP_976343.1| - 0.015 15.1 0.0 0.042 13.7 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636120|ref|YP_976343.1| - 0.026 14.3 0.0 0.04 13.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|121636120|ref|YP_976343.1| - 0.031 14.0 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_24 PF13578.6 gi|121636120|ref|YP_976343.1| - 0.07 14.2 0.0 0.18 12.8 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|121636120|ref|YP_976343.1| - 0.16 11.5 0.1 0.24 10.9 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Pox_Ag35 PF03286.14 gi|121636121|ref|YP_976344.1| - 0.04 13.7 0.2 0.065 13.0 0.2 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF885 PF05960.11 gi|121636121|ref|YP_976344.1| - 0.098 12.3 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Activator-TraM PF11657.8 gi|121636122|ref|YP_976345.1| - 0.015 15.1 0.9 0.015 15.1 0.9 2.1 3 0 0 3 3 3 0 Transcriptional activator TraM PEPCK_GTP PF00821.18 gi|121636123|ref|YP_976346.1| - 8.6e-171 567.6 0.0 1.1e-170 567.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PEPCK_N PF17297.2 gi|121636123|ref|YP_976346.1| - 4.4e-102 340.3 0.0 5.7e-102 339.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase N-terminal domain AAA_28 PF13521.6 gi|121636124|ref|YP_976347.1| - 1.4e-28 100.2 0.1 2.8e-28 99.2 0.1 1.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|121636124|ref|YP_976347.1| - 0.00083 19.8 0.0 0.0013 19.1 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CTP_transf_like PF01467.26 gi|121636124|ref|YP_976347.1| - 0.0016 18.6 0.0 0.038 14.2 0.0 2.3 2 1 0 2 2 2 1 Cytidylyltransferase-like AAA_16 PF13191.6 gi|121636124|ref|YP_976347.1| - 0.0078 16.6 0.1 0.016 15.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain Cytidylate_kin PF02224.18 gi|121636124|ref|YP_976347.1| - 0.068 12.9 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Cytidylate kinase AAA_33 PF13671.6 gi|121636124|ref|YP_976347.1| - 0.11 12.6 0.0 0.25 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 gi|121636124|ref|YP_976347.1| - 0.13 12.0 0.1 0.2 11.4 0.1 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 gi|121636124|ref|YP_976347.1| - 0.16 12.3 0.0 0.47 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|121636124|ref|YP_976347.1| - 0.19 11.6 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 NTPase B12-binding PF02310.19 gi|121636125|ref|YP_976348.1| - 3.2e-13 49.8 0.1 1.8e-11 44.1 0.0 2.5 2 0 0 2 2 2 2 B12 binding domain Radical_SAM PF04055.21 gi|121636125|ref|YP_976348.1| - 5.7e-13 49.6 0.0 1e-12 48.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily AMP-binding PF00501.28 gi|121636126|ref|YP_976349.1| - 1.6e-74 251.0 0.0 2.1e-74 250.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636126|ref|YP_976349.1| - 4.1e-17 62.9 0.0 9.3e-17 61.8 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF5111 PF17138.4 gi|121636126|ref|YP_976349.1| - 0.015 15.2 0.0 0.05 13.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5111) PAC2 PF09754.9 gi|121636126|ref|YP_976349.1| - 0.032 14.2 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 PAC2 family DEDD_Tnp_IS110 PF01548.17 gi|121636126|ref|YP_976349.1| - 0.16 11.8 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Transposase Acyl-CoA_dh_1 PF00441.24 gi|121636127|ref|YP_976350.1| - 2.6e-47 160.8 4.6 2.6e-47 160.8 4.6 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121636127|ref|YP_976350.1| - 1.8e-29 102.7 0.8 4.7e-29 101.3 0.1 2.1 2 1 1 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636127|ref|YP_976350.1| - 2e-24 85.6 0.0 4.4e-24 84.5 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636127|ref|YP_976350.1| - 8.3e-20 71.4 3.1 1.4e-19 70.7 3.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain MaoC_dehydratas PF01575.19 gi|121636128|ref|YP_976351.1| - 0.00013 21.5 0.0 0.36 10.4 0.0 2.2 2 0 0 2 2 2 2 MaoC like domain Abhydrolase_3 PF07859.13 gi|121636129|ref|YP_976352.1| - 2.9e-60 203.7 0.2 3.7e-60 203.4 0.2 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|121636129|ref|YP_976352.1| - 2.5e-06 26.7 0.0 7.9e-06 25.0 0.0 1.6 1 1 0 1 1 1 1 Carboxylesterase family AXE1 PF05448.12 gi|121636129|ref|YP_976352.1| - 3.1e-06 26.1 0.1 2.6e-05 23.1 0.1 1.9 1 1 1 2 2 2 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|121636129|ref|YP_976352.1| - 8.2e-05 22.2 0.3 0.00068 19.2 0.0 2.3 3 0 0 3 3 3 1 Prolyl oligopeptidase family DLH PF01738.18 gi|121636129|ref|YP_976352.1| - 0.00062 19.4 0.0 0.56 9.7 0.0 2.1 2 0 0 2 2 2 2 Dienelactone hydrolase family Esterase_phd PF10503.9 gi|121636129|ref|YP_976352.1| - 0.02 14.4 0.2 0.04 13.4 0.2 1.4 1 0 0 1 1 1 0 Esterase PHB depolymerase BAAT_C PF08840.11 gi|121636129|ref|YP_976352.1| - 0.09 12.7 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Oxidored_molyb PF00174.19 gi|121636130|ref|YP_976353.1| - 2.3e-18 66.4 0.0 3.4e-18 65.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Ni_hydr_CYTB PF01292.20 gi|121636130|ref|YP_976353.1| - 9.8e-05 22.0 12.7 0.0049 16.5 0.6 2.4 1 1 1 2 2 2 2 Prokaryotic cytochrome b561 DUF3236 PF11576.8 gi|121636130|ref|YP_976353.1| - 0.17 11.6 0.3 0.38 10.4 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3236) Phage_holin_2_3 PF16080.5 gi|121636130|ref|YP_976353.1| - 5.2 6.9 9.5 3.1 7.6 0.1 3.0 3 0 0 3 3 3 0 Bacteriophage holin family HP1 DUF4405 PF14358.6 gi|121636130|ref|YP_976353.1| - 7.9 7.1 18.7 0.53 10.9 1.9 3.2 2 2 0 2 2 2 0 Domain of unknown function (DUF4405) Oxidored_q2 PF00420.24 gi|121636131|ref|YP_976354.1| - 0.23 11.1 0.1 0.23 11.1 0.1 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Abhydrolase_3 PF07859.13 gi|121636132|ref|YP_976355.1| - 9.3e-25 87.7 0.1 1.6e-24 86.9 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121636132|ref|YP_976355.1| - 3.8e-11 42.9 0.0 7.5e-10 38.6 0.0 2.3 1 1 0 1 1 1 1 Prolyl oligopeptidase family COesterase PF00135.28 gi|121636132|ref|YP_976355.1| - 1e-09 37.9 0.2 7.7e-09 34.9 0.2 1.9 1 1 0 1 1 1 1 Carboxylesterase family Hydrolase_4 PF12146.8 gi|121636132|ref|YP_976355.1| - 0.0044 16.3 0.1 0.087 12.1 0.0 2.4 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|121636132|ref|YP_976355.1| - 0.0048 17.0 0.0 0.046 13.8 0.0 2.2 2 0 0 2 2 2 1 TAP-like protein BAAT_C PF08840.11 gi|121636132|ref|YP_976355.1| - 0.0053 16.7 0.0 0.024 14.6 0.0 1.9 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase_phd PF10503.9 gi|121636132|ref|YP_976355.1| - 0.022 14.3 0.0 1.4 8.4 0.0 2.3 2 0 0 2 2 2 0 Esterase PHB depolymerase DLH PF01738.18 gi|121636132|ref|YP_976355.1| - 0.031 13.8 0.0 0.11 12.0 0.0 2.1 2 1 0 2 2 2 0 Dienelactone hydrolase family WES_acyltransf PF03007.16 gi|121636133|ref|YP_976356.1| - 1.2e-71 241.6 0.8 1.4e-71 241.4 0.8 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 gi|121636133|ref|YP_976356.1| - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Condensation domain Aldedh PF00171.22 gi|121636134|ref|YP_976357.1| - 3.3e-81 273.1 0.3 3.9e-81 272.9 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|121636134|ref|YP_976357.1| - 0.086 11.9 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Aldedh PF00171.22 gi|121636135|ref|YP_976358.1| - 4.8e-19 68.2 0.1 5.4e-19 68.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Methyltransf_11 PF08241.12 gi|121636136|ref|YP_976359.1| - 1.4e-15 57.7 0.0 2.6e-15 56.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636136|ref|YP_976359.1| - 6.4e-10 39.6 0.0 1.2e-09 38.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636136|ref|YP_976359.1| - 2.5e-07 30.7 0.0 3.5e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636136|ref|YP_976359.1| - 8.4e-06 26.5 0.0 2.1e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636136|ref|YP_976359.1| - 0.00014 21.7 0.0 0.00091 19.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121636136|ref|YP_976359.1| - 0.00073 18.9 0.0 0.003 16.9 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Peptidase_M66 PF10462.9 gi|121636136|ref|YP_976359.1| - 0.58 9.1 2.1 0.79 8.6 2.1 1.1 1 0 0 1 1 1 0 Peptidase M66 Glycos_transf_1 PF00534.20 gi|121636137|ref|YP_976360.1| - 1.2e-29 103.0 0.0 2.2e-29 102.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|121636137|ref|YP_976360.1| - 6.1e-22 78.5 0.0 9.7e-22 77.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121636137|ref|YP_976360.1| - 2.5e-17 63.4 2.2 2.5e-17 63.4 2.2 2.2 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|121636137|ref|YP_976360.1| - 1e-15 58.5 13.6 1e-15 58.5 13.6 2.2 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|121636137|ref|YP_976360.1| - 4.5e-10 39.8 0.0 7.7e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PorA PF11271.8 gi|121636139|ref|YP_976362.1| - 3.2e-96 322.2 3.8 3.8e-96 321.9 3.8 1.0 1 0 0 1 1 1 1 Porin PorA CD36 PF01130.21 gi|121636139|ref|YP_976362.1| - 0.063 11.8 0.1 0.1 11.1 0.1 1.2 1 0 0 1 1 1 0 CD36 family Acyl_transf_3 PF01757.22 gi|121636140|ref|YP_976363.1| - 1.6e-26 93.2 31.3 1.9e-26 93.0 31.3 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF357 PF04010.13 gi|121636140|ref|YP_976363.1| - 0.32 11.1 1.0 0.8 9.8 1.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF357) PIN PF01850.21 gi|121636141|ref|YP_976364.1| - 1.8e-09 38.2 0.3 1.8e-09 38.2 0.3 1.4 2 0 0 2 2 2 1 PIN domain PTE PF02126.18 gi|121636142|ref|YP_976365.1| - 1.2e-145 484.5 0.2 1.4e-145 484.4 0.2 1.0 1 0 0 1 1 1 1 Phosphotriesterase family Amidohydro_2 PF04909.14 gi|121636142|ref|YP_976365.1| - 0.023 14.5 0.1 0.065 13.0 0.1 1.9 1 1 0 1 1 1 0 Amidohydrolase Acyl-CoA_dh_1 PF00441.24 gi|121636143|ref|YP_976366.1| - 1.4e-13 51.3 0.8 8.8e-13 48.7 0.2 2.2 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636143|ref|YP_976366.1| - 5e-08 33.0 0.0 9.7e-08 32.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636143|ref|YP_976366.1| - 0.01 16.1 1.3 0.016 15.5 0.2 1.8 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain TetR_N PF00440.23 gi|121636144|ref|YP_976367.1| - 1.1e-12 47.6 1.0 1.1e-12 47.6 1.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 gi|121636144|ref|YP_976367.1| - 9.6e-05 22.7 3.7 9.6e-05 22.7 3.7 2.3 2 1 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_29 PF17938.1 gi|121636144|ref|YP_976367.1| - 0.13 12.3 1.4 0.94 9.6 0.0 2.5 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Ribonuc_red_sm PF00268.21 gi|121636145|ref|YP_976368.1| - 5.3e-18 65.5 0.0 6.8e-18 65.1 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Haem_oxygenas_2 PF14518.6 gi|121636145|ref|YP_976368.1| - 0.011 15.5 0.1 0.017 14.9 0.1 1.4 1 0 0 1 1 1 0 Iron-containing redox enzyme Rubrerythrin PF02915.17 gi|121636145|ref|YP_976368.1| - 0.052 14.0 0.2 4.4 7.7 0.1 2.6 2 1 1 3 3 3 0 Rubrerythrin Aldedh PF00171.22 gi|121636146|ref|YP_976369.1| - 7.4e-144 479.7 1.2 9.2e-144 479.4 1.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|121636146|ref|YP_976369.1| - 0.035 13.1 0.0 0.079 12.0 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Acetyltransf_6 PF13480.7 gi|121636146|ref|YP_976369.1| - 0.94 9.6 5.5 0.7 10.0 3.3 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain LMF1 PF06762.14 gi|121636147|ref|YP_976370.1| - 1.6e-125 419.7 18.8 3.9e-66 224.0 4.1 2.2 1 1 1 2 2 2 2 Lipase maturation factor DUF3367 PF11847.8 gi|121636148|ref|YP_976371.1| - 2.4e-280 931.2 27.7 2.4e-280 931.2 27.7 2.4 2 1 1 3 3 3 1 Alpha-(1->3)-arabinofuranosyltransferase F5_F8_type_C PF00754.25 gi|121636148|ref|YP_976371.1| - 9.6e-11 41.9 0.0 5.4e-06 26.6 0.0 2.5 2 0 0 2 2 2 2 F5/8 type C domain DUF2613 PF11021.8 gi|121636149|ref|YP_976372.1| - 8e-22 77.1 1.1 8.8e-22 77.0 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2613) Glyco_hydro_3 PF00933.21 gi|121636150|ref|YP_976373.1| - 6.6e-83 278.7 0.0 7.8e-83 278.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain TetR_N PF00440.23 gi|121636151|ref|YP_976374.1| - 4.5e-17 61.6 0.0 9.7e-17 60.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|121636151|ref|YP_976374.1| - 2.6e-06 27.7 0.1 4.6e-06 26.9 0.1 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_15 PF17918.1 gi|121636151|ref|YP_976374.1| - 0.00025 21.8 1.1 0.0004 21.1 0.4 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|121636151|ref|YP_976374.1| - 0.002 18.3 0.0 0.0045 17.1 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase TetR_C_6 PF13977.6 gi|121636151|ref|YP_976374.1| - 0.0055 16.9 0.5 0.0097 16.1 0.5 1.5 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_32 PF09209.11 gi|121636151|ref|YP_976374.1| - 0.037 14.0 0.1 0.063 13.3 0.1 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_33 PF13305.6 gi|121636151|ref|YP_976374.1| - 0.072 13.8 1.1 0.12 13.2 0.4 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF4837 PF16125.5 gi|121636151|ref|YP_976374.1| - 0.13 11.2 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4837) RHH_5 PF07878.11 gi|121636152|ref|YP_976375.1| - 0.087 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 PIN PF01850.21 gi|121636153|ref|YP_976376.1| - 3.5e-09 37.2 0.0 3.9e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 PIN domain MaoC_dehydratas PF01575.19 gi|121636154|ref|YP_976377.1| - 5.7e-28 97.0 0.0 3.9e-26 91.0 0.0 2.3 2 0 0 2 2 2 2 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121636154|ref|YP_976377.1| - 1.5e-06 28.4 0.3 0.04 14.1 0.1 2.2 2 0 0 2 2 2 2 N-terminal half of MaoC dehydratase Cas9_a PF18470.1 gi|121636154|ref|YP_976377.1| - 0.0054 16.3 0.0 0.0076 15.8 0.0 1.1 1 0 0 1 1 1 1 Cas9 alpha-helical lobe domain adh_short_C2 PF13561.6 gi|121636155|ref|YP_976378.1| - 4.4e-51 173.7 10.0 1.1e-49 169.1 6.1 2.9 2 1 1 3 3 3 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121636155|ref|YP_976378.1| - 2.1e-44 151.3 5.0 4.5e-44 150.3 3.7 1.9 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 gi|121636155|ref|YP_976378.1| - 4.9e-13 49.4 2.6 4.9e-13 49.4 2.6 1.7 2 0 0 2 2 2 1 KR domain Epimerase PF01370.21 gi|121636155|ref|YP_976378.1| - 0.00047 19.7 0.2 0.00082 18.9 0.2 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 gi|121636155|ref|YP_976378.1| - 0.027 14.3 0.4 0.08 12.8 0.3 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Thiolase_N PF00108.23 gi|121636156|ref|YP_976379.1| - 2.7e-43 148.2 0.0 4.1e-43 147.6 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121636156|ref|YP_976379.1| - 6e-29 100.2 0.2 1.2e-28 99.2 0.2 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121636156|ref|YP_976379.1| - 0.0042 16.7 0.1 0.0094 15.6 0.1 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Acyl-CoA_dh_C PF12806.7 gi|121636157|ref|YP_976380.1| - 6.5e-30 103.8 1.1 1.8e-29 102.4 1.1 1.8 1 0 0 1 1 1 1 Acetyl-CoA dehydrogenase C-terminal like Acyl-CoA_dh_M PF02770.19 gi|121636157|ref|YP_976380.1| - 7.1e-17 61.4 0.0 1.6e-16 60.3 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|121636157|ref|YP_976380.1| - 1.5e-14 54.5 1.3 1.4e-13 51.3 1.3 2.3 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain AcylCoA_DH_N PF12418.8 gi|121636157|ref|YP_976380.1| - 6.1e-09 35.8 0.0 1.4e-08 34.6 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase N terminal Acyl-CoA_dh_N PF02771.16 gi|121636157|ref|YP_976380.1| - 0.0002 22.0 0.0 0.0008 20.1 0.0 2.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121636157|ref|YP_976380.1| - 0.012 15.9 0.1 0.087 13.1 0.0 2.6 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Flavin_Reduct PF01613.18 gi|121636158|ref|YP_976381.1| - 3.9e-25 88.7 0.2 4.5e-25 88.5 0.2 1.0 1 0 0 1 1 1 1 Flavin reductase like domain DUF4815 PF16075.5 gi|121636158|ref|YP_976381.1| - 0.15 10.4 0.0 0.18 10.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4815) MFS_1 PF07690.16 gi|121636159|ref|YP_976382.1| - 0.077 11.9 49.6 1.9 7.4 20.4 2.9 1 1 1 2 2 2 0 Major Facilitator Superfamily PsbN PF02468.15 gi|121636159|ref|YP_976382.1| - 3.6 7.5 5.2 7.1 6.6 0.3 3.7 2 0 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) Fer2_3 PF13085.6 gi|121636160|ref|YP_976383.1| - 5.8e-27 93.8 0.1 1e-26 93.0 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|121636160|ref|YP_976383.1| - 1.7e-15 57.2 9.3 2.5e-15 56.6 6.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 gi|121636160|ref|YP_976383.1| - 2.2e-06 27.5 0.9 2.2e-06 27.5 0.9 2.1 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 gi|121636160|ref|YP_976383.1| - 0.00024 21.6 7.0 0.00024 21.6 7.0 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|121636160|ref|YP_976383.1| - 0.00048 20.3 6.5 0.19 11.9 0.3 2.6 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121636160|ref|YP_976383.1| - 0.0036 17.9 6.2 0.0036 17.9 6.2 2.8 2 2 2 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|121636160|ref|YP_976383.1| - 0.0051 16.9 9.7 0.18 12.0 0.2 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|121636160|ref|YP_976383.1| - 0.049 14.6 8.0 0.77 10.7 0.2 3.0 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Thioredoxin_7 PF13899.6 gi|121636160|ref|YP_976383.1| - 0.06 13.5 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 Thioredoxin-like Fer2_4 PF13510.6 gi|121636160|ref|YP_976383.1| - 0.1 12.7 0.2 0.1 12.7 0.2 1.9 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Fer4_10 PF13237.6 gi|121636160|ref|YP_976383.1| - 0.2 11.8 16.0 0.77 9.9 11.1 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain FAD_binding_2 PF00890.24 gi|121636161|ref|YP_976384.1| - 4.4e-87 292.9 4.6 5.4e-87 292.6 4.6 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|121636161|ref|YP_976384.1| - 3.4e-21 75.6 0.0 6.7e-21 74.6 0.0 1.5 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|121636161|ref|YP_976384.1| - 8.6e-08 31.7 3.7 3.3e-05 23.3 1.2 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121636161|ref|YP_976384.1| - 1.9e-05 24.5 4.0 0.00036 20.2 4.0 2.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121636161|ref|YP_976384.1| - 0.00037 19.3 4.3 0.00083 18.2 0.5 2.5 3 0 0 3 3 3 1 HI0933-like protein Thi4 PF01946.17 gi|121636161|ref|YP_976384.1| - 0.001 18.4 2.1 0.015 14.6 0.2 2.8 2 1 1 3 3 3 1 Thi4 family GIDA PF01134.22 gi|121636161|ref|YP_976384.1| - 0.012 14.7 2.8 0.012 14.7 2.8 2.2 3 0 0 3 3 3 0 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|121636161|ref|YP_976384.1| - 0.08 12.2 0.6 0.17 11.1 0.6 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|121636161|ref|YP_976384.1| - 0.13 11.6 0.3 0.23 10.7 0.3 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|121636161|ref|YP_976384.1| - 0.16 10.9 0.1 0.27 10.3 0.1 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|121636161|ref|YP_976384.1| - 0.33 10.2 4.4 0.47 9.7 4.4 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase HSP20 PF00011.21 gi|121636164|ref|YP_976387.1| - 2.4e-14 53.3 0.0 2.9e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|121636164|ref|YP_976387.1| - 5.3e-07 29.1 0.3 2.4e-06 27.0 0.3 1.9 1 1 0 1 1 1 1 HSP20-like domain found in ArsA Pyr_redox_2 PF07992.14 gi|121636165|ref|YP_976388.1| - 8.9e-47 159.7 2.6 1.3e-46 159.1 2.6 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 gi|121636165|ref|YP_976388.1| - 2.4e-20 72.6 0.1 6.3e-20 71.3 0.0 1.7 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain Pyr_redox PF00070.27 gi|121636165|ref|YP_976388.1| - 1.3e-17 64.1 4.9 4.4e-16 59.2 0.3 3.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer2_BFD PF04324.15 gi|121636165|ref|YP_976388.1| - 1.4e-14 54.1 6.7 2.5e-09 37.3 5.2 3.0 2 0 0 2 2 2 2 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 gi|121636165|ref|YP_976388.1| - 2.8e-10 39.9 0.0 1.8e-09 37.3 0.0 2.3 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 gi|121636165|ref|YP_976388.1| - 6.6e-09 35.6 0.1 1.8e-08 34.2 0.1 1.7 1 0 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox_3 PF13738.6 gi|121636165|ref|YP_976388.1| - 7.9e-06 25.3 0.0 0.51 9.6 0.1 3.0 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121636165|ref|YP_976388.1| - 6e-05 22.3 0.7 0.041 13.0 0.2 3.1 2 1 0 3 3 3 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|121636165|ref|YP_976388.1| - 6.6e-05 22.2 4.0 0.028 13.5 0.5 2.5 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|121636165|ref|YP_976388.1| - 0.00056 19.6 7.4 0.023 14.3 0.0 3.5 2 2 1 3 3 3 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|121636165|ref|YP_976388.1| - 0.0072 15.7 0.9 1.9 7.7 0.0 3.0 2 1 1 3 3 3 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|121636165|ref|YP_976388.1| - 0.016 14.0 0.5 5 5.7 0.0 2.7 3 1 0 3 3 3 0 HI0933-like protein NAD_binding_8 PF13450.6 gi|121636165|ref|YP_976388.1| - 0.019 15.2 0.4 0.071 13.3 0.4 2.1 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|121636165|ref|YP_976388.1| - 0.027 14.9 1.1 3.1 8.3 0.1 2.6 2 0 0 2 2 2 0 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|121636165|ref|YP_976388.1| - 0.054 12.7 0.7 0.1 11.8 0.7 1.4 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 gi|121636165|ref|YP_976388.1| - 0.11 12.8 0.7 19 5.6 0.1 2.9 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_9 PF13454.6 gi|121636165|ref|YP_976388.1| - 0.27 11.2 9.4 1.4 8.9 0.2 3.7 3 1 1 4 4 4 0 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|121636165|ref|YP_976388.1| - 0.29 10.4 5.7 0.048 12.9 1.1 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|121636165|ref|YP_976388.1| - 0.93 8.6 1.9 3.5 6.7 0.1 2.4 2 1 1 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.18 gi|121636165|ref|YP_976388.1| - 2.1 8.2 3.8 2.6 7.9 0.6 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rieske_2 PF13806.6 gi|121636166|ref|YP_976389.1| - 2.7e-35 120.4 0.0 3.1e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain CobU PF02283.16 gi|121636167|ref|YP_976390.1| - 1.3e-49 168.1 0.0 1.4e-49 167.9 0.0 1.0 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase Dynamin_N PF00350.23 gi|121636167|ref|YP_976390.1| - 0.059 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Dynamin family GATase_3 PF07685.14 gi|121636168|ref|YP_976391.1| - 6e-44 150.0 0.0 9e-44 149.4 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|121636168|ref|YP_976391.1| - 2.7e-23 82.4 0.0 4.2e-23 81.8 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|121636168|ref|YP_976391.1| - 1.1e-20 74.3 0.0 4.4e-20 72.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain Peptidase_S51 PF03575.17 gi|121636168|ref|YP_976391.1| - 0.0067 16.1 0.0 0.0095 15.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 GATase PF00117.28 gi|121636168|ref|YP_976391.1| - 0.14 11.9 0.0 0.37 10.6 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121636168|ref|YP_976391.1| - 0.15 11.8 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Peptidase C26 PPE PF00823.19 gi|121636169|ref|YP_976392.1| - 9.7e-57 191.5 21.0 9.7e-57 191.5 21.0 2.3 2 0 0 2 2 2 1 PPE family TetR_C_16 PF17920.1 gi|121636171|ref|YP_976394.1| - 7e-25 87.3 0.1 9e-25 87.0 0.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain CbiX PF01903.17 gi|121636172|ref|YP_976395.1| - 2.7e-26 92.0 0.3 6.9e-17 61.7 0.1 2.8 2 1 0 2 2 2 2 CbiX HEM4 PF02602.15 gi|121636173|ref|YP_976396.1| - 1.7e-38 132.3 0.0 2.5e-38 131.7 0.0 1.2 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Trans_reg_C PF00486.28 gi|121636173|ref|YP_976396.1| - 1.6e-12 47.3 0.0 6e-12 45.5 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal MFS_1 PF07690.16 gi|121636174|ref|YP_976397.1| - 7e-15 54.8 53.7 7e-15 54.8 53.7 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Acetyltransf_9 PF13527.7 gi|121636175|ref|YP_976398.1| - 4.5e-11 42.9 0.1 6.6e-11 42.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121636175|ref|YP_976398.1| - 3e-07 30.7 0.1 3.7e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121636175|ref|YP_976398.1| - 5.5e-05 23.5 0.1 8.9e-05 22.8 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121636175|ref|YP_976398.1| - 0.00043 20.2 0.0 0.00055 19.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DEK_C PF08766.11 gi|121636175|ref|YP_976398.1| - 0.045 13.7 0.1 0.13 12.2 0.1 1.6 2 0 0 2 2 2 0 DEK C terminal domain CT_A_B PF02626.15 gi|121636176|ref|YP_976399.1| - 9.8e-82 274.5 0.1 1.1e-81 274.3 0.1 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain A and B CT_C_D PF02682.16 gi|121636177|ref|YP_976400.1| - 1.1e-52 178.8 0.1 1.2e-52 178.6 0.1 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D Peripla_BP_2 PF01497.18 gi|121636178|ref|YP_976401.1| - 3.5e-40 138.0 0.5 4.3e-40 137.8 0.5 1.0 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.9 gi|121636178|ref|YP_976401.1| - 0.035 13.9 1.9 0.035 13.9 1.9 2.1 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Hydantoinase_B PF02538.14 gi|121636179|ref|YP_976402.1| - 2e-203 676.5 4.9 2e-203 676.5 4.9 1.6 2 0 0 2 2 2 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|121636179|ref|YP_976402.1| - 6.2e-115 383.4 2.7 6.2e-115 383.4 2.7 1.8 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|121636179|ref|YP_976402.1| - 1.6e-60 203.9 0.2 2.5e-58 196.7 0.0 2.6 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MFS_1 PF07690.16 gi|121636180|ref|YP_976403.1| - 4.2e-13 49.0 58.5 4.2e-13 49.0 58.5 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF485 PF04341.12 gi|121636180|ref|YP_976403.1| - 0.027 14.4 0.4 0.027 14.4 0.4 4.8 5 0 0 5 5 5 0 Protein of unknown function, DUF485 MFS_2 PF13347.6 gi|121636180|ref|YP_976403.1| - 0.068 11.7 24.9 0.0083 14.7 14.3 2.4 1 1 0 2 2 2 0 MFS/sugar transport protein PhdYeFM_antitox PF02604.19 gi|121636181|ref|YP_976404.1| - 4.8e-14 51.9 0.2 9.5e-14 51.0 0.2 1.4 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF2249 PF10006.9 gi|121636181|ref|YP_976404.1| - 0.022 14.6 0.7 0.062 13.2 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) DNA_primase_S PF01896.19 gi|121636182|ref|YP_976405.1| - 5.9e-06 26.4 0.0 2.2e-05 24.6 0.0 1.9 1 1 0 1 1 1 1 DNA primase small subunit AMP-binding PF00501.28 gi|121636183|ref|YP_976406.1| - 4.4e-76 256.2 0.0 5.8e-76 255.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636183|ref|YP_976406.1| - 8.3e-21 74.8 0.1 3e-20 73.0 0.1 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121636184|ref|YP_976407.1| - 1.2e-44 152.1 5.8 4.2e-24 85.5 4.9 2.4 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121636184|ref|YP_976407.1| - 4e-24 85.4 0.2 7.2e-11 42.8 0.1 2.7 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636184|ref|YP_976407.1| - 7.2e-20 71.0 0.0 1e-18 67.3 0.0 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636184|ref|YP_976407.1| - 5.5e-08 33.2 8.5 5.5e-08 33.2 8.5 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Hydrolase_4 PF12146.8 gi|121636185|ref|YP_976408.1| - 7.8e-06 25.3 0.1 0.0015 17.8 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 gi|121636185|ref|YP_976408.1| - 0.0015 18.0 0.1 0.079 12.4 0.0 2.4 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|121636185|ref|YP_976408.1| - 0.0046 16.6 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold TetR_N PF00440.23 gi|121636186|ref|YP_976409.1| - 1.5e-10 40.7 0.3 4e-10 39.3 0.3 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_27 PF17935.1 gi|121636186|ref|YP_976409.1| - 0.018 15.1 0.1 0.16 12.0 0.0 2.4 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Glyoxalase PF00903.25 gi|121636187|ref|YP_976410.1| - 1.3e-23 83.6 0.0 1.6e-23 83.3 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|121636187|ref|YP_976410.1| - 4.4e-06 26.9 0.0 2.1e-05 24.7 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|121636187|ref|YP_976410.1| - 0.036 14.9 0.0 0.085 13.7 0.0 1.7 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|121636187|ref|YP_976410.1| - 0.13 12.4 0.0 4.5 7.3 0.0 2.2 2 0 0 2 2 2 0 Glyoxalase-like domain TetR_N PF00440.23 gi|121636188|ref|YP_976411.1| - 9.5e-06 25.3 0.0 2.7e-05 23.8 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_8 PF14278.6 gi|121636188|ref|YP_976411.1| - 0.0027 17.8 0.0 0.0084 16.2 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator C-terminal region HTH_AraC PF00165.23 gi|121636188|ref|YP_976411.1| - 0.024 14.7 0.1 0.1 12.7 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF2236 PF09995.9 gi|121636189|ref|YP_976412.1| - 2.1e-49 168.8 6.5 2.8e-49 168.4 6.5 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2236) PIN PF01850.21 gi|121636190|ref|YP_976413.1| - 2.7e-11 44.0 0.0 3e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121636190|ref|YP_976413.1| - 0.005 16.6 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) RHH_1 PF01402.21 gi|121636191|ref|YP_976414.1| - 1.7e-06 27.7 2.7 2.8e-06 27.1 2.7 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family VapB_antitoxin PF09957.9 gi|121636191|ref|YP_976414.1| - 0.00095 19.0 0.7 0.0018 18.1 0.7 1.5 1 1 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB CcdA PF07362.12 gi|121636191|ref|YP_976414.1| - 0.0097 16.3 1.7 0.022 15.2 0.6 2.1 2 1 0 2 2 2 1 Post-segregation antitoxin CcdA PSK_trans_fac PF07704.11 gi|121636191|ref|YP_976414.1| - 0.011 16.5 0.9 0.015 16.0 0.9 1.2 1 0 0 1 1 1 0 Rv0623-like transcription factor PE PF00934.20 gi|121636192|ref|YP_976415.1| - 1e-33 115.5 26.6 1.9e-33 114.6 26.6 1.5 1 0 0 1 1 1 1 PE family PE PF00934.20 gi|121636193|ref|YP_976416.1| - 2.5e-35 120.7 25.2 3.7e-35 120.1 25.2 1.3 1 0 0 1 1 1 1 PE family PE PF00934.20 gi|121636194|ref|YP_976417.1| - 2.4e-34 117.5 26.6 3.8e-34 116.9 26.6 1.3 1 0 0 1 1 1 1 PE family PPE PF00823.19 gi|121636195|ref|YP_976418.1| - 1.2e-58 197.7 23.1 1.2e-58 197.7 23.1 2.8 3 0 0 3 3 3 1 PPE family LCM PF04072.14 gi|121636196|ref|YP_976419.1| - 1.5e-60 204.4 0.2 1.9e-60 204.1 0.2 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase AAA PF00004.29 gi|121636197|ref|YP_976420.1| - 4.3e-19 69.2 0.0 8.3e-19 68.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_6 PF17866.1 gi|121636197|ref|YP_976420.1| - 6.4e-13 48.7 0.2 1.7e-12 47.3 0.2 1.8 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|121636197|ref|YP_976420.1| - 1.4e-06 27.9 0.2 8.3e-05 22.1 0.1 2.2 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 gi|121636197|ref|YP_976420.1| - 2.6e-05 24.0 0.0 8.7e-05 22.3 0.0 2.0 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|121636197|ref|YP_976420.1| - 0.00061 20.2 1.1 0.0014 19.1 0.1 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 gi|121636197|ref|YP_976420.1| - 0.00092 19.8 0.0 0.0023 18.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|121636197|ref|YP_976420.1| - 0.0011 18.9 0.0 0.0031 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|121636197|ref|YP_976420.1| - 0.0055 16.5 0.2 0.03 14.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|121636197|ref|YP_976420.1| - 0.011 16.0 0.3 0.26 11.5 0.1 2.5 1 1 1 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|121636197|ref|YP_976420.1| - 0.019 14.7 0.2 0.26 11.0 0.2 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_28 PF13521.6 gi|121636197|ref|YP_976420.1| - 0.021 15.1 0.1 0.097 12.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|121636197|ref|YP_976420.1| - 0.022 14.9 0.1 0.08 13.1 0.1 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121636197|ref|YP_976420.1| - 0.034 13.9 0.0 0.065 13.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_2 PF07724.14 gi|121636197|ref|YP_976420.1| - 0.041 14.0 0.0 0.088 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Rad17 PF03215.15 gi|121636197|ref|YP_976420.1| - 0.052 13.5 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain DUF815 PF05673.13 gi|121636197|ref|YP_976420.1| - 0.061 12.5 0.1 4.5 6.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_19 PF13245.6 gi|121636197|ref|YP_976420.1| - 0.067 13.5 0.1 0.2 12.0 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 gi|121636197|ref|YP_976420.1| - 0.13 12.1 0.1 0.87 9.4 0.0 2.3 2 1 1 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|121636197|ref|YP_976420.1| - 0.17 11.3 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_11 PF13086.6 gi|121636197|ref|YP_976420.1| - 0.2 11.4 0.0 0.38 10.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|121636197|ref|YP_976420.1| - 0.27 10.8 3.0 1.4 8.4 0.6 2.8 2 1 0 2 2 2 0 AAA domain T7SS_ESX1_EccB PF05108.13 gi|121636198|ref|YP_976421.1| - 1.6e-177 591.0 2.6 1.8e-177 590.8 2.6 1.0 1 0 0 1 1 1 1 Type VII secretion system ESX-1, transport TM domain B FtsK_SpoIIIE PF01580.18 gi|121636199|ref|YP_976422.1| - 1.2e-102 342.4 0.0 8.2e-73 244.7 0.0 4.5 3 1 0 3 3 3 3 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|121636199|ref|YP_976422.1| - 4.3e-10 40.0 0.0 0.032 14.5 0.0 3.9 3 0 0 3 3 3 3 AAA domain AAA_16 PF13191.6 gi|121636199|ref|YP_976422.1| - 5.9e-09 36.5 0.1 0.043 14.2 0.0 4.2 3 1 0 3 3 3 3 AAA ATPase domain NACHT PF05729.12 gi|121636199|ref|YP_976422.1| - 3.5e-08 33.5 0.0 0.011 15.6 0.0 3.8 3 0 0 3 3 3 2 NACHT domain AAA_19 PF13245.6 gi|121636199|ref|YP_976422.1| - 9.2e-06 26.1 0.0 1.2 9.5 0.0 3.5 3 0 0 3 3 3 1 AAA domain ATPase_2 PF01637.18 gi|121636199|ref|YP_976422.1| - 9.2e-06 25.7 0.0 0.0039 17.1 0.0 3.0 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea Viral_helicase1 PF01443.18 gi|121636199|ref|YP_976422.1| - 0.00017 21.4 0.0 3.5 7.3 0.0 3.2 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|121636199|ref|YP_976422.1| - 0.00021 20.5 0.1 4.2 6.3 0.1 3.5 3 0 0 3 3 3 2 Type II/IV secretion system protein AAA_29 PF13555.6 gi|121636199|ref|YP_976422.1| - 0.00023 20.9 1.9 2.8 7.7 0.3 3.5 3 0 0 3 3 3 2 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 gi|121636199|ref|YP_976422.1| - 0.00036 19.5 0.1 0.1 11.5 0.0 2.9 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 gi|121636199|ref|YP_976422.1| - 0.00079 19.6 0.0 0.0085 16.2 0.0 2.2 2 0 0 2 2 2 1 Helicase HerA, central domain RNA_helicase PF00910.22 gi|121636199|ref|YP_976422.1| - 0.0008 19.8 0.0 5.1 7.5 0.0 3.7 4 0 0 4 4 4 1 RNA helicase ABC_tran PF00005.27 gi|121636199|ref|YP_976422.1| - 0.0022 18.5 0.0 1.9 9.0 0.0 3.2 3 0 0 3 3 3 1 ABC transporter AAA_14 PF13173.6 gi|121636199|ref|YP_976422.1| - 0.0027 17.8 0.0 0.81 9.7 0.0 3.6 3 1 0 3 3 3 1 AAA domain cobW PF02492.19 gi|121636199|ref|YP_976422.1| - 0.0049 16.5 0.1 2.9 7.5 0.0 2.7 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|121636199|ref|YP_976422.1| - 0.0052 16.9 0.0 13 6.0 0.0 3.7 3 1 0 3 3 3 0 AAA domain Roc PF08477.13 gi|121636199|ref|YP_976422.1| - 0.027 14.7 0.0 0.34 11.1 0.0 2.6 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase GspH PF12019.8 gi|121636199|ref|YP_976422.1| - 0.031 14.7 0.0 0.1 13.0 0.0 1.9 1 0 0 1 1 1 0 Type II transport protein GspH AAA_24 PF13479.6 gi|121636199|ref|YP_976422.1| - 0.043 13.5 0.0 12 5.5 0.0 2.9 3 0 0 3 3 3 0 AAA domain AAA_10 PF12846.7 gi|121636199|ref|YP_976422.1| - 0.057 12.3 0.1 5 5.9 0.0 2.6 3 0 0 3 3 3 0 AAA-like domain AAA_23 PF13476.6 gi|121636199|ref|YP_976422.1| - 0.072 13.6 0.0 29 5.1 0.0 3.1 3 0 0 3 3 3 0 AAA domain TniB PF05621.11 gi|121636199|ref|YP_976422.1| - 0.078 12.4 0.0 5.4 6.4 0.0 3.0 3 1 0 3 3 3 0 Bacterial TniB protein MMR_HSR1 PF01926.23 gi|121636199|ref|YP_976422.1| - 0.093 12.8 0.0 8.4 6.5 0.0 3.1 3 0 0 3 3 3 0 50S ribosome-binding GTPase RHSP PF07999.11 gi|121636199|ref|YP_976422.1| - 0.19 10.5 0.0 0.32 9.8 0.0 1.3 1 0 0 1 1 1 0 Retrotransposon hot spot protein AAA_18 PF13238.6 gi|121636199|ref|YP_976422.1| - 0.22 12.1 0.0 3 8.4 0.0 2.7 3 0 0 3 3 3 0 AAA domain PE PF00934.20 gi|121636200|ref|YP_976423.1| - 4.2e-22 78.3 12.8 5.1e-22 78.0 12.8 1.1 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636200|ref|YP_976423.1| - 1.4 9.4 8.3 3.1 8.3 8.3 1.8 1 1 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PPE PF00823.19 gi|121636201|ref|YP_976424.1| - 5.3e-61 205.3 24.5 5.3e-61 205.3 24.5 2.9 3 0 0 3 3 3 1 PPE family WXG100 PF06013.12 gi|121636202|ref|YP_976425.1| - 9.8e-07 28.9 6.6 1.2e-06 28.7 6.6 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 gi|121636202|ref|YP_976425.1| - 0.038 14.5 13.4 0.046 14.2 13.4 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm KORA PF16509.5 gi|121636202|ref|YP_976425.1| - 0.086 13.1 0.1 0.14 12.5 0.1 1.4 1 1 0 1 1 1 0 TrfB plasmid transcriptional repressor WXG100 PF06013.12 gi|121636203|ref|YP_976426.1| - 1.7e-16 60.2 7.1 2e-16 60.0 7.1 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG FTO_CTD PF12934.7 gi|121636203|ref|YP_976426.1| - 0.038 13.7 1.8 0.045 13.5 1.8 1.1 1 0 0 1 1 1 0 FTO C-terminal domain Xpo1 PF08389.12 gi|121636203|ref|YP_976426.1| - 0.13 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Exportin 1-like protein ESX-1_EspG PF14011.6 gi|121636204|ref|YP_976427.1| - 7.1e-64 215.8 5.2 8.1e-64 215.6 5.2 1.0 1 0 0 1 1 1 1 EspG family YukD PF08817.10 gi|121636205|ref|YP_976428.1| - 2.3e-22 79.4 1.6 6.6e-22 78.0 1.6 1.8 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD Peptidase_S8 PF00082.22 gi|121636206|ref|YP_976429.1| - 2.8e-36 125.3 5.4 5.1e-36 124.5 5.4 1.4 1 1 0 1 1 1 1 Subtilase family EccE PF11203.8 gi|121636207|ref|YP_976430.1| - 8.7e-15 54.9 4.9 8.7e-15 54.9 4.9 2.1 2 0 0 2 2 2 1 Putative type VII ESX secretion system translocon, EccE DUF3631 PF12307.8 gi|121636207|ref|YP_976430.1| - 0.025 14.8 0.8 3.7 7.7 0.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3631) Abhydrolase_1 PF00561.20 gi|121636208|ref|YP_976431.1| - 3.7e-05 23.5 0.5 0.0001 22.1 0.4 1.7 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121636208|ref|YP_976431.1| - 0.00034 21.3 2.8 0.00034 21.3 2.8 2.3 2 1 0 2 2 2 1 Alpha/beta hydrolase family DUF2048 PF09752.9 gi|121636208|ref|YP_976431.1| - 0.028 13.5 0.0 0.096 11.8 0.0 1.7 2 0 0 2 2 2 0 Abhydrolase domain containing 18 UPF0227 PF05728.12 gi|121636208|ref|YP_976431.1| - 0.072 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Methyltransf_23 PF13489.6 gi|121636209|ref|YP_976432.1| - 7.8e-13 48.6 0.0 1.1e-12 48.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636209|ref|YP_976432.1| - 1.4e-12 48.2 0.0 2.4e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636209|ref|YP_976432.1| - 3.6e-11 43.6 0.0 6.7e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636209|ref|YP_976432.1| - 1.8e-08 34.3 0.0 2.1e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636209|ref|YP_976432.1| - 5.4e-08 33.5 0.0 1.2e-07 32.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121636209|ref|YP_976432.1| - 4.9e-06 26.2 0.0 8.5e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 gi|121636209|ref|YP_976432.1| - 0.0002 21.5 0.0 0.00057 20.0 0.0 1.6 1 1 0 2 2 2 1 FtsJ-like methyltransferase Methyltransf_2 PF00891.18 gi|121636209|ref|YP_976432.1| - 0.0003 20.1 0.0 0.00047 19.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|121636209|ref|YP_976432.1| - 0.00069 19.6 0.0 0.001 19.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|121636209|ref|YP_976432.1| - 0.00075 19.2 0.0 0.001 18.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|121636209|ref|YP_976432.1| - 0.17 11.2 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Sulphotransf PF09037.10 gi|121636210|ref|YP_976433.1| - 9.8e-106 352.7 0.3 1.1e-105 352.5 0.3 1.0 1 0 0 1 1 1 1 Stf0 sulphotransferase Sulfotransfer_3 PF13469.6 gi|121636210|ref|YP_976433.1| - 0.00017 22.1 0.2 0.34 11.2 0.0 2.2 2 0 0 2 2 2 2 Sulfotransferase family Sulfatase PF00884.23 gi|121636211|ref|YP_976434.1| - 1.5e-43 149.4 0.1 7.8e-42 143.7 0.1 2.1 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|121636211|ref|YP_976434.1| - 1.9e-10 40.9 0.2 3.6e-08 33.4 0.2 2.4 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4976 PF16347.5 gi|121636211|ref|YP_976434.1| - 1.2e-06 28.7 0.0 0.014 15.7 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4976) PE PF00934.20 gi|121636212|ref|YP_976435.1| - 2.9e-32 110.8 28.8 5.4e-32 110.0 28.8 1.5 1 0 0 1 1 1 1 PE family RHH_1 PF01402.21 gi|121636213|ref|YP_976436.1| - 5e-11 42.1 2.2 4.5e-10 39.1 1.2 2.1 1 1 1 2 2 2 2 Ribbon-helix-helix protein, copG family CcdA PF07362.12 gi|121636213|ref|YP_976436.1| - 0.00054 20.3 0.9 0.00075 19.9 0.9 1.4 1 1 0 1 1 1 1 Post-segregation antitoxin CcdA HicB_lk_antitox PF15919.5 gi|121636213|ref|YP_976436.1| - 0.0016 18.5 0.1 0.003 17.6 0.0 1.5 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_3 PF12651.7 gi|121636213|ref|YP_976436.1| - 0.058 13.4 0.2 0.17 11.8 0.0 1.7 2 0 0 2 2 2 0 Ribbon-helix-helix domain AvrPtoB_bdg PF16847.5 gi|121636213|ref|YP_976436.1| - 0.087 13.3 0.4 0.1 13.1 0.4 1.1 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain RHH_1 PF01402.21 gi|121636215|ref|YP_976438.1| - 2e-05 24.3 3.0 3.2e-05 23.7 0.5 2.4 2 1 0 2 2 2 1 Ribbon-helix-helix protein, copG family Pcc1 PF09341.10 gi|121636215|ref|YP_976438.1| - 0.0025 17.9 0.2 0.0031 17.6 0.2 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 HTH_AsnC-type PF13404.6 gi|121636215|ref|YP_976438.1| - 0.013 15.3 0.7 0.013 15.3 0.7 1.6 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain ParD PF09386.10 gi|121636215|ref|YP_976438.1| - 0.048 14.0 0.0 0.054 13.9 0.0 1.1 1 0 0 1 1 1 0 Antitoxin ParD PIN PF01850.21 gi|121636216|ref|YP_976439.1| - 1.3e-10 41.8 0.0 1.5e-10 41.6 0.0 1.1 1 0 0 1 1 1 1 PIN domain TetR_N PF00440.23 gi|121636217|ref|YP_976440.1| - 2.3e-17 62.5 0.0 4.6e-17 61.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|121636217|ref|YP_976440.1| - 6.1e-08 32.9 2.0 6.1e-08 32.9 2.0 1.5 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_C_31 PF17940.1 gi|121636217|ref|YP_976440.1| - 0.11 12.8 6.1 0.04 14.1 3.2 1.8 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_15 PF17918.1 gi|121636217|ref|YP_976440.1| - 0.27 12.0 4.0 3.6 8.4 3.8 2.5 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain adh_short PF00106.25 gi|121636218|ref|YP_976441.1| - 6.8e-21 74.6 0.0 4.7e-18 65.4 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636218|ref|YP_976441.1| - 3.5e-10 39.8 0.0 1.7e-09 37.6 0.0 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636218|ref|YP_976441.1| - 4.7e-07 29.9 0.0 7.1e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|121636218|ref|YP_976441.1| - 0.00085 19.3 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding Pentapeptide_2 PF01469.18 gi|121636219|ref|YP_976442.1| - 3.3e-120 391.7 575.0 4.3e-12 45.7 24.0 25.1 10 6 16 27 27 27 24 Pentapeptide repeats (8 copies) Pentapeptide_2 PF01469.18 gi|121636220|ref|YP_976443.1| - 1.4e-183 594.5 871.5 2.9e-11 43.1 23.9 36.6 11 9 26 41 41 41 34 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121636220|ref|YP_976443.1| - 1.2e-56 191.2 27.9 1.2e-56 191.2 27.9 2.0 1 1 1 2 2 2 1 PPE family Nitroreductase PF00881.24 gi|121636221|ref|YP_976444.1| - 2.2e-24 86.4 0.0 3.1e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family PAP2 PF01569.21 gi|121636223|ref|YP_976446.1| - 1.5e-14 53.9 13.0 1.5e-14 53.9 13.0 2.3 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|121636223|ref|YP_976446.1| - 2.1 8.0 24.0 0.18 11.5 17.9 2.3 2 1 0 2 2 2 0 PAP2 superfamily YkuD PF03734.14 gi|121636224|ref|YP_976447.1| - 6.7e-05 23.3 0.1 9.8e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain zf-H2C2_5 PF13909.6 gi|121636224|ref|YP_976447.1| - 0.17 11.6 0.1 0.31 10.9 0.1 1.3 1 0 0 1 1 1 0 C2H2-type zinc-finger domain SnoaL_4 PF13577.6 gi|121636225|ref|YP_976448.1| - 6.5e-28 97.4 1.9 8.6e-28 97.0 1.9 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 gi|121636225|ref|YP_976448.1| - 6.4e-06 26.7 1.4 8.7e-06 26.3 1.4 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|121636225|ref|YP_976448.1| - 0.015 15.5 0.2 0.044 14.1 0.2 1.7 1 1 0 1 1 1 0 SnoaL-like domain DUF4440 PF14534.6 gi|121636225|ref|YP_976448.1| - 0.069 13.6 0.4 0.12 12.8 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) HSP70 PF00012.20 gi|121636227|ref|YP_976450.1| - 1.2e-17 63.4 0.0 1.6e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|121636227|ref|YP_976450.1| - 0.009 14.9 0.1 0.019 13.8 0.0 1.5 2 0 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 gi|121636227|ref|YP_976450.1| - 0.01 15.6 0.3 0.032 13.9 0.2 1.8 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain DUF3060 PF11259.8 gi|121636229|ref|YP_976452.1| - 7.6e-23 80.0 4.6 7.6e-23 80.0 4.6 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3060) DUF3040 PF11239.8 gi|121636229|ref|YP_976452.1| - 0.014 15.7 2.3 0.015 15.5 0.7 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) CwsA PF10814.8 gi|121636229|ref|YP_976452.1| - 0.027 14.6 0.6 0.056 13.6 0.6 1.5 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA Glyco_hydro_16 PF00722.21 gi|121636230|ref|YP_976453.1| - 2.3e-14 53.3 0.2 1.2e-13 50.9 0.2 1.9 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 DEC-1_N PF04625.13 gi|121636230|ref|YP_976453.1| - 0.1 11.6 5.3 0.14 11.2 5.3 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region MIase PF02426.16 gi|121636231|ref|YP_976454.1| - 1.5e-60 201.3 0.0 2.4e-31 107.8 0.0 2.0 2 0 0 2 2 2 2 Muconolactone delta-isomerase GDPD PF03009.17 gi|121636232|ref|YP_976455.1| - 4.9e-40 137.9 0.0 5.9e-40 137.6 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 gi|121636232|ref|YP_976455.1| - 1.8e-06 28.2 1.6 6.2e-06 26.5 0.9 2.3 3 0 0 3 3 3 1 Glycerophosphoryl diester phosphodiesterase family Zip PF02535.22 gi|121636233|ref|YP_976456.1| - 1.8e-09 37.3 10.1 1.8e-09 37.3 10.1 2.0 2 0 0 2 2 2 2 ZIP Zinc transporter Peptidase_C15 PF01470.17 gi|121636234|ref|YP_976457.1| - 9.1e-87 290.5 0.1 1.1e-86 290.2 0.1 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase DCD PF06559.11 gi|121636236|ref|YP_976459.1| - 3.1e-12 46.0 0.0 4.8e-07 28.9 0.0 2.1 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|121636236|ref|YP_976459.1| - 8.7e-11 41.6 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 dUTPase UDPG_MGDP_dh_N PF03721.14 gi|121636237|ref|YP_976460.1| - 4.7e-61 205.6 0.0 7e-61 205.1 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|121636237|ref|YP_976460.1| - 1.6e-31 108.4 0.0 4.5e-31 106.9 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|121636237|ref|YP_976460.1| - 2.9e-28 98.4 0.1 7.1e-28 97.1 0.0 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|121636237|ref|YP_976460.1| - 8e-07 29.6 0.3 0.099 13.2 0.0 3.6 3 1 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|121636237|ref|YP_976460.1| - 0.0004 20.6 0.7 0.18 11.9 0.1 3.4 3 1 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|121636237|ref|YP_976460.1| - 0.01 15.7 0.0 0.03 14.2 0.0 1.8 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PIG-L PF02585.17 gi|121636238|ref|YP_976461.1| - 4.5e-26 92.0 0.2 6.3e-26 91.6 0.2 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Rhodanese PF00581.20 gi|121636239|ref|YP_976462.1| - 7e-17 61.9 0.0 1.5e-16 60.9 0.0 1.5 2 0 0 2 2 2 1 Rhodanese-like domain HTH_20 PF12840.7 gi|121636239|ref|YP_976462.1| - 4e-09 36.4 2.7 1.3e-08 34.7 0.7 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121636239|ref|YP_976462.1| - 2.6e-07 30.4 0.0 4.4e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|121636239|ref|YP_976462.1| - 3.5e-06 26.7 0.8 3.5e-06 26.7 0.8 2.7 2 1 1 3 3 3 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|121636239|ref|YP_976462.1| - 7e-05 22.6 0.0 0.00016 21.5 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|121636239|ref|YP_976462.1| - 0.0081 16.0 1.2 0.0081 16.0 1.2 2.2 2 1 0 2 2 2 1 MarR family HTH_29 PF13551.6 gi|121636239|ref|YP_976462.1| - 0.011 15.8 0.3 0.028 14.4 0.3 1.8 1 0 0 1 1 1 0 Winged helix-turn helix HTH_24 PF13412.6 gi|121636239|ref|YP_976462.1| - 0.011 15.3 0.3 0.079 12.5 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Dimerisation2 PF16864.5 gi|121636239|ref|YP_976462.1| - 0.014 15.4 0.2 0.028 14.4 0.1 1.5 1 1 0 1 1 1 0 Dimerisation domain HTH_28 PF13518.6 gi|121636239|ref|YP_976462.1| - 0.017 15.2 0.6 0.061 13.5 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|121636239|ref|YP_976462.1| - 0.033 14.0 0.9 0.087 12.7 0.1 2.2 2 0 0 2 2 2 0 Homeodomain-like domain DprA_WH PF17782.1 gi|121636239|ref|YP_976462.1| - 0.062 13.4 0.8 0.062 13.4 0.8 2.6 3 1 0 3 3 3 0 DprA winged helix domain HTH_43 PF09904.9 gi|121636239|ref|YP_976462.1| - 0.084 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Rrf2 PF02082.20 gi|121636239|ref|YP_976462.1| - 0.11 12.9 0.1 0.29 11.5 0.1 1.7 1 0 0 1 1 1 0 Transcriptional regulator TFIIE_alpha PF02002.17 gi|121636239|ref|YP_976462.1| - 0.13 12.1 0.0 0.26 11.1 0.0 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_Crp_2 PF13545.6 gi|121636239|ref|YP_976462.1| - 0.14 12.2 1.2 0.33 11.0 0.2 2.1 2 2 0 3 3 3 0 Crp-like helix-turn-helix domain Methyltransf_25 PF13649.6 gi|121636240|ref|YP_976463.1| - 9.5e-17 61.5 0.1 1.4e-16 60.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636240|ref|YP_976463.1| - 1.1e-13 51.6 0.0 1.8e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636240|ref|YP_976463.1| - 1.8e-07 31.2 0.0 2.1e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636240|ref|YP_976463.1| - 1e-06 29.4 0.0 1.4e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636240|ref|YP_976463.1| - 1.1e-06 28.5 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|121636240|ref|YP_976463.1| - 0.00013 21.4 0.0 0.00024 20.6 0.0 1.3 1 1 0 1 1 1 1 Tellurite resistance protein TehB TPMT PF05724.11 gi|121636240|ref|YP_976463.1| - 0.0011 18.7 0.0 0.0023 17.6 0.0 1.6 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_20 PF12147.8 gi|121636240|ref|YP_976463.1| - 0.0096 15.1 0.1 0.03 13.5 0.1 1.7 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_29 PF03141.16 gi|121636240|ref|YP_976463.1| - 0.013 14.1 0.0 0.014 13.9 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF938 PF06080.12 gi|121636240|ref|YP_976463.1| - 0.013 15.3 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_15 PF09445.10 gi|121636240|ref|YP_976463.1| - 0.013 15.1 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.18 gi|121636240|ref|YP_976463.1| - 0.013 14.8 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|121636240|ref|YP_976463.1| - 0.028 14.3 0.1 0.053 13.4 0.0 1.4 2 0 0 2 2 2 0 Hypothetical methyltransferase Pox_MCEL PF03291.16 gi|121636240|ref|YP_976463.1| - 0.038 13.1 0.0 0.58 9.2 0.0 2.0 1 1 0 1 1 1 0 mRNA capping enzyme He_PIG_assoc PF10632.9 gi|121636240|ref|YP_976463.1| - 0.17 11.6 0.4 6 6.6 0.0 2.4 2 0 0 2 2 2 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase p450 PF00067.22 gi|121636241|ref|YP_976464.1| - 2.1e-63 214.7 0.0 5.1e-63 213.4 0.0 1.5 1 1 0 1 1 1 1 Cytochrome P450 Cas_Csd1 PF09709.10 gi|121636241|ref|YP_976464.1| - 0.092 11.4 0.1 0.13 11.0 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csd1) TetR_N PF00440.23 gi|121636242|ref|YP_976465.1| - 2.1e-16 59.4 0.0 3.9e-16 58.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|121636242|ref|YP_976465.1| - 3.9e-11 43.2 1.0 7.2e-11 42.3 1.0 1.4 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_31 PF17940.1 gi|121636242|ref|YP_976465.1| - 1.7e-07 31.4 3.6 2.5e-07 30.9 2.4 1.9 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_15 PF17918.1 gi|121636242|ref|YP_976465.1| - 0.051 14.3 0.3 0.15 12.8 0.3 1.9 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|121636242|ref|YP_976465.1| - 0.054 13.6 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Put_DNA-bind_N PF06971.13 gi|121636242|ref|YP_976465.1| - 0.13 12.3 0.1 0.36 10.9 0.0 1.8 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus Methyltransf_11 PF08241.12 gi|121636243|ref|YP_976466.1| - 2.1e-15 57.2 0.0 2.9e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636243|ref|YP_976466.1| - 2.6e-13 50.5 0.0 3.8e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636243|ref|YP_976466.1| - 1.7e-08 34.5 0.0 2.5e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636243|ref|YP_976466.1| - 1.9e-07 31.0 0.0 2.2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121636243|ref|YP_976466.1| - 5.9e-06 25.8 0.0 7.2e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|121636243|ref|YP_976466.1| - 7.3e-06 26.7 0.0 1.2e-05 25.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|121636243|ref|YP_976466.1| - 0.016 14.7 0.0 0.12 11.8 0.0 2.1 1 1 0 1 1 1 0 Putative methyltransferase Methyltransf_9 PF08003.11 gi|121636243|ref|YP_976466.1| - 0.05 12.5 0.0 0.091 11.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1698) PCMT PF01135.19 gi|121636243|ref|YP_976466.1| - 0.11 12.3 0.1 0.22 11.2 0.1 1.6 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TetR_N PF00440.23 gi|121636244|ref|YP_976467.1| - 3.1e-12 46.1 3.1 6e-12 45.2 3.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_7 PF14246.6 gi|121636244|ref|YP_976467.1| - 0.021 14.9 0.1 0.062 13.3 0.0 1.9 2 0 0 2 2 2 0 AefR-like transcriptional repressor, C-terminal domain Pyr_redox_2 PF07992.14 gi|121636245|ref|YP_976468.1| - 6.5e-22 78.1 0.0 2.4e-21 76.2 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121636245|ref|YP_976468.1| - 0.0031 17.1 0.5 0.098 12.2 0.0 2.3 1 1 1 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|121636245|ref|YP_976468.1| - 0.024 15.2 0.0 2.7 8.6 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121636245|ref|YP_976468.1| - 0.061 13.6 0.1 0.37 11.1 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain MDMPI_N PF11716.8 gi|121636246|ref|YP_976469.1| - 3.1e-22 79.8 4.7 3.1e-22 79.8 4.7 2.0 2 0 0 2 2 2 1 Mycothiol maleylpyruvate isomerase N-terminal domain MDMPI_C PF07398.11 gi|121636246|ref|YP_976469.1| - 9.4e-18 64.9 6.8 9.4e-18 64.9 6.8 2.2 2 1 0 2 2 2 1 MDMPI C-terminal domain DinB_2 PF12867.7 gi|121636246|ref|YP_976469.1| - 0.016 15.7 1.0 0.024 15.1 0.4 1.6 2 0 0 2 2 2 0 DinB superfamily SnoaL_2 PF12680.7 gi|121636247|ref|YP_976470.1| - 1.6e-07 31.9 2.5 2.1e-07 31.5 2.5 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|121636247|ref|YP_976470.1| - 0.0042 17.3 0.2 0.0057 16.9 0.2 1.5 1 1 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|121636247|ref|YP_976470.1| - 0.069 13.6 0.5 0.12 12.8 0.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4440) NTP_transferase PF00483.23 gi|121636248|ref|YP_976471.1| - 6.6e-65 219.1 0.0 8.3e-65 218.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|121636248|ref|YP_976471.1| - 1.2e-10 42.0 0.0 1.6e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain PE PF00934.20 gi|121636249|ref|YP_976472.1| - 3.2e-16 59.4 4.4 5.2e-16 58.8 4.4 1.3 1 0 0 1 1 1 1 PE family DUF222 PF02720.17 gi|121636250|ref|YP_976473.1| - 1e-92 310.9 21.6 1e-92 310.9 21.6 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF222) HNH_5 PF14279.6 gi|121636250|ref|YP_976473.1| - 0.0034 17.2 0.9 0.0067 16.3 0.9 1.5 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 gi|121636250|ref|YP_976473.1| - 0.024 14.8 3.0 0.045 13.9 3.0 1.5 1 0 0 1 1 1 0 HNH endonuclease Invasin_D3 PF09134.10 gi|121636250|ref|YP_976473.1| - 0.16 12.3 0.0 0.32 11.3 0.0 1.4 1 0 0 1 1 1 0 Invasin, domain 3 Aminotran_1_2 PF00155.21 gi|121636251|ref|YP_976474.1| - 1.7e-45 155.8 0.0 1.9e-45 155.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|121636251|ref|YP_976474.1| - 2.9e-05 23.6 0.0 4.1e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|121636251|ref|YP_976474.1| - 0.00074 18.6 0.0 0.0014 17.6 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|121636251|ref|YP_976474.1| - 0.035 12.7 0.0 0.054 12.0 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|121636251|ref|YP_976474.1| - 0.044 13.1 0.0 0.074 12.3 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase CCG PF02754.16 gi|121636252|ref|YP_976475.1| - 2e-38 130.4 1.3 7.1e-18 64.6 0.2 2.6 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|121636252|ref|YP_976475.1| - 2.9e-12 46.8 4.9 4.8e-12 46.1 3.4 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|121636252|ref|YP_976475.1| - 1.3e-10 41.2 4.0 1.3e-10 41.2 4.0 3.0 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|121636252|ref|YP_976475.1| - 2.4e-10 40.4 4.3 3.3e-10 40.0 2.3 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121636252|ref|YP_976475.1| - 1.1e-07 32.3 4.9 0.0035 17.9 0.2 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|121636252|ref|YP_976475.1| - 5e-07 30.2 2.9 0.025 15.1 0.1 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|121636252|ref|YP_976475.1| - 2e-05 25.5 4.8 0.082 13.8 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|121636252|ref|YP_976475.1| - 0.00022 21.1 16.8 0.0019 18.2 1.4 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|121636252|ref|YP_976475.1| - 0.00045 19.9 18.9 0.015 15.1 5.9 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|121636252|ref|YP_976475.1| - 0.023 15.6 17.6 0.14 13.1 5.7 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|121636252|ref|YP_976475.1| - 0.027 15.0 19.3 0.15 12.6 3.1 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|121636252|ref|YP_976475.1| - 0.073 13.2 10.9 0.5 10.5 1.6 2.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121636252|ref|YP_976475.1| - 0.096 12.8 13.6 2 8.6 1.8 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|121636252|ref|YP_976475.1| - 0.22 12.4 13.4 0.55 11.1 0.9 3.4 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|121636252|ref|YP_976475.1| - 1.2 9.9 8.0 10 7.0 0.3 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|121636252|ref|YP_976475.1| - 1.5 9.0 7.7 0.86 9.8 0.9 2.6 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|121636252|ref|YP_976475.1| - 5.8 7.5 14.3 5.1 7.7 0.7 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I GerE PF00196.19 gi|121636253|ref|YP_976476.1| - 4.6e-14 51.7 0.0 1.2e-13 50.4 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|121636253|ref|YP_976476.1| - 5.3e-07 29.2 0.4 5.9e-05 22.7 0.1 2.9 2 0 0 2 2 2 1 Sigma-70, region 4 AAA_30 PF13604.6 gi|121636253|ref|YP_976476.1| - 0.0027 17.5 0.5 0.0027 17.5 0.5 3.6 2 1 1 3 3 3 1 AAA domain HTH_23 PF13384.6 gi|121636253|ref|YP_976476.1| - 0.007 16.1 1.2 0.27 11.1 0.1 3.5 3 0 0 3 3 3 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|121636253|ref|YP_976476.1| - 0.008 15.7 0.1 0.34 10.5 0.1 2.7 2 0 0 2 2 2 1 Sigma-70, region 4 NTPase_1 PF03266.15 gi|121636253|ref|YP_976476.1| - 0.008 16.1 0.5 0.014 15.3 0.5 1.3 1 0 0 1 1 1 1 NTPase HTH_28 PF13518.6 gi|121636253|ref|YP_976476.1| - 0.011 15.9 0.0 7.3 6.8 0.1 3.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|121636253|ref|YP_976476.1| - 0.03 13.8 0.0 7.8 6.0 0.1 3.2 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_38 PF13936.6 gi|121636253|ref|YP_976476.1| - 0.065 13.0 0.0 0.27 11.0 0.0 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain Zeta_toxin PF06414.12 gi|121636253|ref|YP_976476.1| - 0.12 11.7 0.1 0.24 10.7 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 gi|121636253|ref|YP_976476.1| - 0.13 12.5 2.9 3.2 8.0 0.2 2.8 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|121636253|ref|YP_976476.1| - 0.14 11.9 0.1 0.3 10.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 gi|121636253|ref|YP_976476.1| - 0.27 11.5 3.9 0.3 11.4 1.3 2.3 1 1 1 2 2 2 0 AAA domain MarR_2 PF12802.7 gi|121636253|ref|YP_976476.1| - 0.71 9.8 12.8 0.094 12.6 0.3 4.6 5 0 0 5 5 4 0 MarR family AAA_28 PF13521.6 gi|121636253|ref|YP_976476.1| - 1.5 9.1 4.6 0.61 10.3 0.6 2.4 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 gi|121636253|ref|YP_976476.1| - 1.7 9.0 17.9 0.14 12.5 8.7 3.8 2 2 0 2 2 2 0 AAA ATPase domain Dynamin_N PF00350.23 gi|121636256|ref|YP_976479.1| - 2.1e-08 34.4 0.0 5.1e-08 33.1 0.0 1.7 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 gi|121636256|ref|YP_976479.1| - 9.3e-05 22.5 0.0 0.00062 19.8 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase MukF_M PF17192.4 gi|121636256|ref|YP_976479.1| - 0.02 14.6 0.8 0.02 14.6 0.8 2.5 3 0 0 3 3 3 0 MukF middle domain Cas_Csa4 PF09703.10 gi|121636256|ref|YP_976479.1| - 0.2 10.9 0.6 0.33 10.2 0.6 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa4) GCN5L1 PF06320.13 gi|121636256|ref|YP_976479.1| - 1.1 9.4 6.3 0.23 11.6 0.5 2.4 2 1 1 3 3 3 0 GCN5-like protein 1 (GCN5L1) PEP-utilisers_N PF05524.13 gi|121636256|ref|YP_976479.1| - 1.7 8.8 8.4 0.64 10.2 0.4 3.3 3 1 1 4 4 4 0 PEP-utilising enzyme, N-terminal TetR_C_11 PF16859.5 gi|121636256|ref|YP_976479.1| - 3.2 8.1 14.5 5.8 7.3 0.1 4.8 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain Dynamin_N PF00350.23 gi|121636257|ref|YP_976480.1| - 1e-09 38.7 0.0 9.5e-08 32.3 0.0 2.2 2 0 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 gi|121636257|ref|YP_976480.1| - 9.6e-07 28.9 0.0 2.4e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|121636257|ref|YP_976480.1| - 0.019 14.9 0.0 0.32 10.9 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase FeoB_N PF02421.18 gi|121636257|ref|YP_976480.1| - 0.054 13.0 0.0 1.1 8.7 0.0 2.2 2 0 0 2 2 2 0 Ferrous iron transport protein B AIG1 PF04548.16 gi|121636257|ref|YP_976480.1| - 0.055 12.8 0.0 3.7 6.8 0.0 2.2 2 0 0 2 2 2 0 AIG1 family BPS PF08947.10 gi|121636257|ref|YP_976480.1| - 0.1 12.4 0.9 0.23 11.3 0.9 1.6 1 0 0 1 1 1 0 BPS (Between PH and SH2) TsaE PF02367.17 gi|121636257|ref|YP_976480.1| - 0.13 12.2 0.0 0.37 10.8 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IIGP PF05049.13 gi|121636257|ref|YP_976480.1| - 0.22 10.5 0.0 0.48 9.4 0.0 1.4 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) DUF3558 PF12079.8 gi|121636258|ref|YP_976481.1| - 3 7.8 9.7 6.9 6.6 9.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3558) NTP_transf_3 PF12804.7 gi|121636259|ref|YP_976482.1| - 5.9e-14 52.7 4.5 7.9e-14 52.3 4.5 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain AA_permease PF00324.21 gi|121636260|ref|YP_976483.1| - 6.4e-100 335.0 36.4 7.7e-100 334.7 36.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|121636260|ref|YP_976483.1| - 1.1e-37 129.9 35.8 1.3e-37 129.7 35.8 1.0 1 0 0 1 1 1 1 Amino acid permease HTH_23 PF13384.6 gi|121636262|ref|YP_976485.1| - 0.00043 20.0 0.4 0.0015 18.2 0.1 2.0 1 1 1 2 2 2 1 Homeodomain-like domain HTH_3 PF01381.22 gi|121636262|ref|YP_976485.1| - 0.012 15.7 0.0 0.021 14.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix HTH_28 PF13518.6 gi|121636262|ref|YP_976485.1| - 0.033 14.3 0.1 0.084 13.0 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 gi|121636262|ref|YP_976485.1| - 0.047 14.0 0.0 0.1 12.9 0.0 1.5 1 0 0 1 1 1 0 Transposase HTH_31 PF13560.6 gi|121636262|ref|YP_976485.1| - 0.054 13.9 1.5 2.1 8.8 0.9 2.9 2 1 0 2 2 2 0 Helix-turn-helix domain HSP70 PF00012.20 gi|121636264|ref|YP_976487.1| - 1.1e-247 823.1 14.5 1.6e-219 730.1 7.8 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 gi|121636264|ref|YP_976487.1| - 1.5e-16 60.2 0.9 4.8e-16 58.5 0.9 1.8 1 1 0 1 1 1 1 MreB/Mbl protein StbA PF06406.11 gi|121636264|ref|YP_976487.1| - 5.8e-05 22.5 0.1 0.22 10.7 0.0 2.6 1 1 1 2 2 2 2 StbA protein FtsA PF14450.6 gi|121636264|ref|YP_976487.1| - 0.015 15.7 5.5 19 5.7 0.0 4.0 3 1 0 3 3 3 0 Cell division protein FtsA ISG65-75 PF11727.8 gi|121636264|ref|YP_976487.1| - 0.45 9.7 6.7 1 8.5 6.7 1.6 1 0 0 1 1 1 0 Invariant surface glycoprotein GrpE PF01025.19 gi|121636265|ref|YP_976488.1| - 3.3e-30 104.9 0.0 5.2e-30 104.3 0.0 1.3 1 0 0 1 1 1 1 GrpE DUF3375 PF11855.8 gi|121636265|ref|YP_976488.1| - 0.00093 18.2 0.6 0.0013 17.7 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3375) FAM184 PF15665.5 gi|121636265|ref|YP_976488.1| - 0.037 13.8 0.1 0.051 13.3 0.1 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Surfac_D-trimer PF09006.11 gi|121636265|ref|YP_976488.1| - 0.046 13.6 0.1 0.12 12.3 0.1 1.7 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation DnaJ_C PF01556.18 gi|121636266|ref|YP_976489.1| - 6.4e-37 126.9 0.0 1.6e-36 125.6 0.0 1.6 1 1 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|121636266|ref|YP_976489.1| - 7.7e-25 86.8 0.1 1.2e-24 86.2 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|121636266|ref|YP_976489.1| - 5.5e-13 49.1 15.0 8.8e-13 48.4 15.0 1.3 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|121636266|ref|YP_976489.1| - 4.3e-06 26.6 15.5 0.00089 19.2 4.6 2.6 2 0 0 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein Lar_restr_allev PF14354.6 gi|121636266|ref|YP_976489.1| - 1.1 9.6 5.5 12 6.4 5.5 2.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar DUF5351 PF17302.2 gi|121636266|ref|YP_976489.1| - 2.4 8.4 19.1 1.1 9.5 4.0 4.1 3 1 0 3 3 3 0 Family of unknown function (DUF5351) MerR_1 PF13411.6 gi|121636267|ref|YP_976490.1| - 3.2e-17 62.4 0.0 5.5e-17 61.6 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 gi|121636267|ref|YP_976490.1| - 2.6e-11 43.1 0.4 4.4e-11 42.3 0.4 1.4 1 0 0 1 1 1 1 MerR family regulatory protein MerR_2 PF13591.6 gi|121636267|ref|YP_976490.1| - 3.9e-07 29.8 0.2 4.6e-07 29.6 0.2 1.1 1 0 0 1 1 1 1 MerR HTH family regulatory protein Lebercilin PF15619.6 gi|121636267|ref|YP_976490.1| - 0.00076 19.2 0.2 0.0012 18.6 0.2 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease CCDC-167 PF15188.6 gi|121636267|ref|YP_976490.1| - 0.029 14.7 0.1 0.14 12.5 0.3 1.8 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 DASH_Hsk3 PF08227.11 gi|121636267|ref|YP_976490.1| - 0.64 10.4 4.6 0.41 11.1 0.4 2.3 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like LPP PF04728.13 gi|121636267|ref|YP_976490.1| - 1.8 9.0 6.1 19 5.7 6.1 2.4 1 1 0 1 1 1 0 Lipoprotein leucine-zipper Pentapeptide_2 PF01469.18 gi|121636268|ref|YP_976491.1| - 0 1035.3 1718.7 1.8e-10 40.5 23.0 70.7 37 17 37 76 76 76 67 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121636268|ref|YP_976491.1| - 4.6e-58 195.8 28.3 8.3e-58 195.0 28.3 1.4 1 0 0 1 1 1 1 PPE family 4HBT PF03061.22 gi|121636269|ref|YP_976492.1| - 4.9e-10 39.6 0.0 8.2e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily Adenylsucc_synt PF00709.21 gi|121636270|ref|YP_976493.1| - 4e-174 579.5 0.0 4.5e-174 579.3 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Chaperone_III PF07824.12 gi|121636271|ref|YP_976494.1| - 0.17 12.1 0.0 0.38 11.0 0.0 1.5 1 0 0 1 1 1 0 Type III secretion chaperone domain Peptidase_M50 PF02163.22 gi|121636272|ref|YP_976495.1| - 2.5e-07 30.2 10.3 0.00086 18.6 0.7 3.1 1 1 1 2 2 2 2 Peptidase family M50 SLATT_3 PF18184.1 gi|121636272|ref|YP_976495.1| - 3.8 7.6 5.8 2.4 8.3 0.1 2.4 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 DUF3151 PF11349.8 gi|121636273|ref|YP_976496.1| - 1.5e-58 196.4 0.3 1.7e-58 196.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3151) CbtA PF09490.10 gi|121636274|ref|YP_976497.1| - 0.0061 16.4 0.6 0.011 15.6 0.6 1.3 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) Lumazine_bd_2 PF12893.7 gi|121636274|ref|YP_976497.1| - 0.015 16.0 0.2 2.6 8.8 0.1 2.3 1 1 1 2 2 2 0 Putative lumazine-binding PRIMA1 PF16101.5 gi|121636274|ref|YP_976497.1| - 0.028 14.5 1.1 0.049 13.7 1.1 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Phage_holin_7_1 PF16081.5 gi|121636274|ref|YP_976497.1| - 0.048 13.8 2.4 0.27 11.4 0.9 2.3 2 0 0 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family SecG PF03840.14 gi|121636274|ref|YP_976497.1| - 0.081 13.0 0.5 0.14 12.3 0.5 1.3 1 0 0 1 1 1 0 Preprotein translocase SecG subunit MgtE PF01769.16 gi|121636275|ref|YP_976498.1| - 8.6e-26 90.8 10.2 1.6e-25 89.9 10.2 1.5 1 0 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.17 gi|121636275|ref|YP_976498.1| - 1.9e-17 63.7 0.7 1.9e-17 63.7 0.7 1.8 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.28 gi|121636275|ref|YP_976498.1| - 8.7e-09 35.7 1.1 0.00088 19.7 0.4 2.6 2 0 0 2 2 2 2 CBS domain FliG_M PF14841.6 gi|121636275|ref|YP_976498.1| - 0.00083 19.5 0.5 0.0026 18.0 0.3 2.0 2 0 0 2 2 2 1 FliG middle domain sCache_3_2 PF17203.4 gi|121636275|ref|YP_976498.1| - 0.017 15.2 0.2 0.039 14.1 0.2 1.5 1 0 0 1 1 1 0 Single cache domain 3 F_bP_aldolase PF01116.20 gi|121636276|ref|YP_976499.1| - 1.2e-81 274.2 0.1 1.4e-81 274.1 0.1 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II SNARE_assoc PF09335.11 gi|121636277|ref|YP_976500.1| - 7.1e-20 71.7 5.3 7.1e-20 71.7 5.3 1.7 2 0 0 2 2 2 1 SNARE associated Golgi protein Glyco_hydro_76 PF03663.14 gi|121636278|ref|YP_976501.1| - 1.4e-30 107.1 0.0 1.6e-30 106.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 76 FTP PF07504.13 gi|121636278|ref|YP_976501.1| - 0.05 13.4 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif Zeta_toxin PF06414.12 gi|121636279|ref|YP_976502.1| - 1e-13 51.1 0.1 2.2e-13 49.9 0.1 1.5 1 1 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|121636279|ref|YP_976502.1| - 1.8e-11 44.4 0.0 2.3e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|121636279|ref|YP_976502.1| - 0.002 18.7 0.0 0.011 16.2 0.0 2.0 1 1 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|121636279|ref|YP_976502.1| - 0.0091 15.7 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|121636279|ref|YP_976502.1| - 0.025 15.0 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|121636279|ref|YP_976502.1| - 0.055 13.1 0.0 0.081 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain CoaE PF01121.20 gi|121636279|ref|YP_976502.1| - 0.14 11.8 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA_23 PF13476.6 gi|121636279|ref|YP_976502.1| - 0.2 12.1 0.0 0.27 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|121636279|ref|YP_976502.1| - 0.22 11.2 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain ParD_like PF11903.8 gi|121636280|ref|YP_976503.1| - 2.9e-22 78.5 2.9 5.1e-22 77.7 2.9 1.4 1 1 0 1 1 1 1 ParD-like antitoxin of type II bacterial toxin-antitoxin system VWA_CoxE PF05762.14 gi|121636281|ref|YP_976504.1| - 1.2e-70 237.3 3.2 1.2e-70 237.3 3.2 1.6 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 gi|121636281|ref|YP_976504.1| - 0.1 13.3 0.0 0.3 11.8 0.0 1.7 2 0 0 2 2 2 0 von Willebrand factor type A domain COXG PF06240.13 gi|121636282|ref|YP_976505.1| - 1.1e-14 54.3 0.2 1.4e-14 54.0 0.2 1.1 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.9 gi|121636282|ref|YP_976505.1| - 0.051 13.8 0.1 0.064 13.5 0.1 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DAP_epimerase PF01678.19 gi|121636282|ref|YP_976505.1| - 0.068 13.4 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Diaminopimelate epimerase AAA_5 PF07728.14 gi|121636283|ref|YP_976506.1| - 3e-11 43.5 0.0 1.1e-10 41.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|121636283|ref|YP_976506.1| - 1.7e-09 37.6 0.0 0.00027 20.8 0.0 2.3 1 1 1 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|121636283|ref|YP_976506.1| - 6.3e-09 36.3 0.0 3.6e-08 33.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|121636283|ref|YP_976506.1| - 5.7e-06 26.8 0.9 6.7e-05 23.3 0.9 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|121636283|ref|YP_976506.1| - 2.3e-05 24.7 0.0 7.3e-05 23.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121636283|ref|YP_976506.1| - 0.00042 20.3 0.1 0.023 14.6 0.0 2.2 2 0 0 2 2 2 1 NACHT domain AAA_2 PF07724.14 gi|121636283|ref|YP_976506.1| - 0.0046 17.1 0.0 0.0099 16.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|121636283|ref|YP_976506.1| - 0.0073 16.1 0.5 0.33 10.7 0.1 2.7 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|121636283|ref|YP_976506.1| - 0.015 14.7 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|121636283|ref|YP_976506.1| - 0.035 13.8 0.0 0.048 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|121636283|ref|YP_976506.1| - 0.055 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|121636283|ref|YP_976506.1| - 0.058 13.1 0.0 1.8 8.2 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|121636283|ref|YP_976506.1| - 0.073 13.0 0.1 0.21 11.5 0.1 1.9 1 1 0 1 1 1 0 NTPase RNA_helicase PF00910.22 gi|121636283|ref|YP_976506.1| - 0.099 13.0 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 gi|121636283|ref|YP_976506.1| - 0.1 13.1 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|121636283|ref|YP_976506.1| - 0.14 11.7 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|121636283|ref|YP_976506.1| - 0.15 12.1 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_19 PF13245.6 gi|121636283|ref|YP_976506.1| - 0.19 12.1 0.1 3.5 8.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 gi|121636283|ref|YP_976506.1| - 0.19 11.8 0.0 1 9.4 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain NTP_transf_3 PF12804.7 gi|121636284|ref|YP_976507.1| - 2.7e-31 109.1 3.9 3.3e-31 108.8 3.9 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|121636284|ref|YP_976507.1| - 0.019 14.7 1.4 0.022 14.5 0.7 1.5 2 0 0 2 2 2 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.23 gi|121636284|ref|YP_976507.1| - 0.17 11.4 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase XdhC_C PF13478.6 gi|121636285|ref|YP_976508.1| - 6.3e-20 71.9 0.4 1e-19 71.2 0.4 1.3 1 0 0 1 1 1 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 gi|121636285|ref|YP_976508.1| - 1.6e-13 50.6 1.5 1.6e-13 50.6 1.5 2.3 3 0 0 3 3 3 1 XdhC and CoxI family Ald_Xan_dh_C2 PF02738.18 gi|121636286|ref|YP_976509.1| - 1.5e-173 578.2 0.1 1.9e-173 577.9 0.1 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|121636286|ref|YP_976509.1| - 3.9e-36 123.7 0.4 1.3e-35 122.1 0.4 1.9 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECR1_N PF14382.6 gi|121636286|ref|YP_976509.1| - 0.073 12.9 0.6 0.4 10.5 0.0 2.5 3 0 0 3 3 3 0 Exosome complex exonuclease RRP4 N-terminal region Fer2_2 PF01799.20 gi|121636287|ref|YP_976510.1| - 2.8e-29 100.9 0.2 2.8e-29 100.9 0.2 1.6 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|121636287|ref|YP_976510.1| - 1.6e-07 31.2 0.3 1.6e-07 31.2 0.3 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|121636287|ref|YP_976510.1| - 0.00076 19.5 3.9 0.0063 16.5 3.9 2.2 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|121636287|ref|YP_976510.1| - 0.015 15.3 1.2 0.015 15.3 1.2 2.0 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Tricorn_PDZ PF14685.6 gi|121636287|ref|YP_976510.1| - 0.028 14.4 0.0 4 7.5 0.0 2.3 1 1 1 2 2 2 0 Tricorn protease PDZ domain FAD_binding_5 PF00941.21 gi|121636288|ref|YP_976511.1| - 1.9e-36 125.4 0.0 2.9e-36 124.8 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 gi|121636288|ref|YP_976511.1| - 2e-23 82.5 1.2 3.2e-23 81.9 1.2 1.3 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain XdhC_C PF13478.6 gi|121636289|ref|YP_976512.1| - 1.3e-41 142.0 1.7 3.3e-41 140.7 0.1 2.2 2 1 0 2 2 2 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 gi|121636289|ref|YP_976512.1| - 7e-40 135.1 13.5 1.9e-21 76.0 4.2 2.8 2 0 0 2 2 2 2 XdhC and CoxI family DUF4523 PF15023.6 gi|121636289|ref|YP_976512.1| - 0.3 10.9 0.0 0.43 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) LysR_substrate PF03466.20 gi|121636290|ref|YP_976513.1| - 7.1e-23 81.1 3.0 1.3e-22 80.2 3.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|121636290|ref|YP_976513.1| - 2.6e-16 59.3 0.2 9.7e-16 57.5 0.2 2.1 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 gi|121636290|ref|YP_976513.1| - 0.14 12.0 1.8 0.22 11.4 0.2 2.2 2 0 0 2 2 2 0 MarR family Collagen PF01391.18 gi|121636291|ref|YP_976514.1| - 0.12 12.2 42.8 1.6 8.5 42.8 2.0 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Dodecin PF07311.12 gi|121636292|ref|YP_976515.1| - 1.2e-20 73.6 0.9 1.3e-20 73.4 0.9 1.0 1 0 0 1 1 1 1 Dodecin SpoU_methylase PF00588.19 gi|121636293|ref|YP_976516.1| - 1.6e-22 80.2 0.1 2e-22 79.9 0.1 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Pribosyltran PF00156.27 gi|121636295|ref|YP_976518.1| - 1.4e-11 44.1 0.8 2e-11 43.7 0.8 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121636295|ref|YP_976518.1| - 0.02 14.3 0.1 0.026 14.0 0.1 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase AAA_2 PF07724.14 gi|121636297|ref|YP_976520.1| - 1.5e-50 171.7 0.1 3.3e-49 167.3 0.0 2.8 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 gi|121636297|ref|YP_976520.1| - 1.2e-36 124.7 5.2 5.1e-36 122.8 0.7 2.5 2 0 0 2 2 2 1 AAA lid domain Clp_N PF02861.20 gi|121636297|ref|YP_976520.1| - 8.2e-27 93.1 1.1 8.9e-13 48.2 0.1 3.3 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component ClpB_D2-small PF10431.9 gi|121636297|ref|YP_976520.1| - 2.1e-26 91.7 1.9 2.7e-26 91.4 0.1 2.3 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 gi|121636297|ref|YP_976520.1| - 1.7e-24 86.7 2.9 1.7e-12 47.9 0.0 4.3 4 0 0 4 4 4 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|121636297|ref|YP_976520.1| - 3.8e-18 65.8 0.7 3.2e-12 46.6 0.0 4.2 3 1 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|121636297|ref|YP_976520.1| - 2.5e-09 37.7 14.6 3.3e-06 27.6 0.1 5.3 4 3 1 6 6 5 2 AAA ATPase domain AAA_22 PF13401.6 gi|121636297|ref|YP_976520.1| - 3.7e-08 33.7 1.1 0.038 14.3 0.0 4.7 4 3 0 4 4 4 2 AAA domain Sigma54_activat PF00158.26 gi|121636297|ref|YP_976520.1| - 5.2e-08 32.8 0.0 2.4e-05 24.1 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|121636297|ref|YP_976520.1| - 3.3e-06 26.9 0.0 0.064 13.0 0.0 2.7 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_23 PF13476.6 gi|121636297|ref|YP_976520.1| - 4.8e-06 27.2 2.4 0.54 10.7 0.0 3.4 3 0 0 3 3 3 2 AAA domain ATPase_2 PF01637.18 gi|121636297|ref|YP_976520.1| - 5.2e-06 26.5 2.6 0.47 10.3 0.0 3.9 4 1 0 4 4 3 2 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|121636297|ref|YP_976520.1| - 2.6e-05 24.3 0.0 0.24 11.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|121636297|ref|YP_976520.1| - 4.1e-05 23.1 0.0 0.52 9.6 0.0 3.3 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|121636297|ref|YP_976520.1| - 4.4e-05 23.1 0.0 0.086 12.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region TniB PF05621.11 gi|121636297|ref|YP_976520.1| - 0.00014 21.4 0.0 0.49 9.8 0.0 3.6 2 1 1 3 3 3 1 Bacterial TniB protein AAA_18 PF13238.6 gi|121636297|ref|YP_976520.1| - 0.00015 22.3 1.0 0.45 11.1 0.0 3.4 3 1 0 3 3 2 1 AAA domain AAA_3 PF07726.11 gi|121636297|ref|YP_976520.1| - 0.00016 21.6 0.1 0.74 9.7 0.0 3.8 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|121636297|ref|YP_976520.1| - 0.00022 21.2 0.1 1.7 8.5 0.0 3.2 3 0 0 3 3 3 2 RsgA GTPase Roc PF08477.13 gi|121636297|ref|YP_976520.1| - 0.00024 21.3 0.0 0.67 10.2 0.0 2.5 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 gi|121636297|ref|YP_976520.1| - 0.00026 21.3 0.0 1.1 9.5 0.0 3.3 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|121636297|ref|YP_976520.1| - 0.00048 20.5 0.0 1.6 9.2 0.0 2.6 2 0 0 2 2 2 2 RNA helicase NACHT PF05729.12 gi|121636297|ref|YP_976520.1| - 0.00062 19.7 0.0 0.23 11.3 0.0 2.6 2 0 0 2 2 2 1 NACHT domain TsaE PF02367.17 gi|121636297|ref|YP_976520.1| - 0.0007 19.6 0.0 1.4 9.0 0.0 3.2 3 0 0 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|121636297|ref|YP_976520.1| - 0.0012 18.6 0.0 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|121636297|ref|YP_976520.1| - 0.0015 18.7 0.1 2.5 8.3 0.0 3.5 3 0 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 gi|121636297|ref|YP_976520.1| - 0.0029 16.9 0.6 0.39 10.0 0.0 3.2 3 0 0 3 3 3 1 Zeta toxin AAA_29 PF13555.6 gi|121636297|ref|YP_976520.1| - 0.0072 16.0 0.0 11 5.8 0.0 3.2 3 0 0 3 3 3 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|121636297|ref|YP_976520.1| - 0.012 16.2 0.2 1.9 9.0 0.0 2.9 3 0 0 3 3 2 0 ABC transporter AAA_25 PF13481.6 gi|121636297|ref|YP_976520.1| - 0.017 14.7 0.1 1.7 8.2 0.0 3.1 2 0 0 2 2 2 0 AAA domain NYD-SP28 PF14772.6 gi|121636297|ref|YP_976520.1| - 0.018 15.1 11.4 0.046 13.8 11.4 1.7 1 0 0 1 1 1 0 Sperm tail T2SSE PF00437.20 gi|121636297|ref|YP_976520.1| - 0.026 13.6 0.0 0.091 11.8 0.0 2.0 1 1 0 1 1 1 0 Type II/IV secretion system protein DUF815 PF05673.13 gi|121636297|ref|YP_976520.1| - 0.035 13.3 0.0 3.1 6.9 0.0 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF815) AAA_19 PF13245.6 gi|121636297|ref|YP_976520.1| - 0.046 14.1 0.1 1.4 9.2 0.0 3.1 3 0 0 3 3 2 0 AAA domain DNA_pol3_delta2 PF13177.6 gi|121636297|ref|YP_976520.1| - 0.064 13.0 0.0 0.41 10.4 0.0 2.2 2 0 0 2 2 2 0 DNA polymerase III, delta subunit SRP54 PF00448.22 gi|121636297|ref|YP_976520.1| - 0.087 12.4 0.0 3.1 7.4 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|121636297|ref|YP_976520.1| - 0.094 12.6 0.0 7.9 6.4 0.0 2.7 2 0 0 2 2 2 0 NTPase FTA4 PF13093.6 gi|121636297|ref|YP_976520.1| - 0.1 12.5 2.8 0.19 11.6 2.8 1.4 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 RuvB_N PF05496.12 gi|121636297|ref|YP_976520.1| - 0.11 12.2 6.2 5.6 6.7 0.0 4.2 4 1 0 4 4 3 0 Holliday junction DNA helicase RuvB P-loop domain AAA_21 PF13304.6 gi|121636297|ref|YP_976520.1| - 0.15 11.9 0.0 92 2.7 0.0 3.7 4 0 0 4 4 3 0 AAA domain, putative AbiEii toxin, Type IV TA system PduV-EutP PF10662.9 gi|121636297|ref|YP_976520.1| - 0.17 11.6 0.0 2.2 8.0 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Torsin PF06309.11 gi|121636297|ref|YP_976520.1| - 0.17 12.0 0.0 0.77 9.9 0.0 1.9 2 0 0 2 2 2 0 Torsin ResIII PF04851.15 gi|121636297|ref|YP_976520.1| - 0.18 11.8 0.0 5.2 7.0 0.0 2.7 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit DUF87 PF01935.17 gi|121636297|ref|YP_976520.1| - 0.52 10.4 2.9 28 4.7 0.0 3.5 3 0 0 3 3 3 0 Helicase HerA, central domain Fez1 PF06818.15 gi|121636297|ref|YP_976520.1| - 0.54 10.7 8.3 1.2 9.5 8.3 1.5 1 0 0 1 1 1 0 Fez1 FAD_binding_6 PF00970.24 gi|121636298|ref|YP_976521.1| - 1.4e-19 70.2 0.0 2.3e-19 69.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Globin PF00042.22 gi|121636298|ref|YP_976521.1| - 7.8e-09 36.1 0.0 1.3e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Globin NAD_binding_1 PF00175.21 gi|121636298|ref|YP_976521.1| - 2.1e-06 28.4 0.0 7.6e-06 26.5 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain GerE PF00196.19 gi|121636299|ref|YP_976522.1| - 2.2e-16 59.1 0.0 4.5e-16 58.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Guanylate_cyc PF00211.20 gi|121636299|ref|YP_976522.1| - 1.1e-07 31.7 0.0 1.7e-06 27.8 0.0 2.2 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain AAA_16 PF13191.6 gi|121636299|ref|YP_976522.1| - 4.8e-06 27.1 1.9 4.8e-06 27.1 1.9 4.5 2 2 1 3 3 2 1 AAA ATPase domain NB-ARC PF00931.22 gi|121636299|ref|YP_976522.1| - 9.5e-06 25.0 0.0 1.6e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain TPR_MalT PF17874.1 gi|121636299|ref|YP_976522.1| - 3.6e-05 23.3 56.7 0.00011 21.7 26.0 3.9 1 1 3 4 4 4 2 MalT-like TPR region AAA_25 PF13481.6 gi|121636299|ref|YP_976522.1| - 0.00012 21.8 4.1 0.00018 21.1 0.2 3.3 4 0 0 4 4 4 1 AAA domain Sigma70_r4_2 PF08281.12 gi|121636299|ref|YP_976522.1| - 0.0017 18.0 0.0 0.0064 16.1 0.0 2.0 1 0 0 1 1 1 1 Sigma-70, region 4 AAA_22 PF13401.6 gi|121636299|ref|YP_976522.1| - 0.0019 18.5 0.1 0.015 15.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|121636299|ref|YP_976522.1| - 0.028 14.5 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|121636299|ref|YP_976522.1| - 0.061 12.5 0.1 0.093 11.9 0.1 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase HTH_23 PF13384.6 gi|121636299|ref|YP_976522.1| - 0.075 12.9 0.1 0.48 10.3 0.0 2.5 2 0 0 2 2 1 0 Homeodomain-like domain NACHT PF05729.12 gi|121636299|ref|YP_976522.1| - 0.13 12.2 1.9 0.94 9.4 1.9 2.4 1 1 0 1 1 1 0 NACHT domain Med25_SD1 PF11235.8 gi|121636299|ref|YP_976522.1| - 0.82 10.0 4.8 3.7 7.9 4.8 2.1 1 0 0 1 1 1 0 Mediator complex subunit 25 synapsin 1 PPE PF00823.19 gi|121636300|ref|YP_976523.1| - 8.5e-62 207.9 27.1 8.5e-62 207.9 27.1 2.3 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121636300|ref|YP_976523.1| - 6.2e-08 33.4 11.5 6.2e-08 33.4 11.5 6.7 2 2 2 4 4 4 1 Polymorphic PE/PPE proteins C terminal ATP-grasp PF02222.22 gi|121636301|ref|YP_976524.1| - 2.9e-22 79.0 0.0 4.7e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Oxidored_nitro PF00148.19 gi|121636301|ref|YP_976524.1| - 0.00092 18.0 0.2 0.0021 16.9 0.1 1.5 2 0 0 2 2 2 1 Nitrogenase component 1 type Oxidoreductase CPSase_L_D2 PF02786.17 gi|121636301|ref|YP_976524.1| - 0.0018 17.8 0.0 0.0062 16.1 0.0 1.8 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|121636301|ref|YP_976524.1| - 0.061 13.4 0.0 0.14 12.2 0.0 1.6 2 0 0 2 2 2 0 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|121636301|ref|YP_976524.1| - 0.17 11.4 0.0 3.4 7.1 0.0 2.2 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus Rhodanese PF00581.20 gi|121636302|ref|YP_976525.1| - 6.6e-06 26.6 0.0 1e-05 26.0 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Cys_Met_Meta_PP PF01053.20 gi|121636303|ref|YP_976526.1| - 9.9e-133 442.4 0.0 1.1e-132 442.2 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|121636303|ref|YP_976526.1| - 6.4e-06 25.7 0.1 2.2e-05 24.0 0.0 1.7 1 1 1 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|121636303|ref|YP_976526.1| - 0.00049 19.4 0.0 0.00072 18.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|121636303|ref|YP_976526.1| - 0.0011 18.0 0.0 0.0022 17.0 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|121636303|ref|YP_976526.1| - 0.051 12.9 0.1 1.4 8.2 0.1 2.5 1 1 0 1 1 1 0 Beta-eliminating lyase SelA PF03841.13 gi|121636303|ref|YP_976526.1| - 0.051 12.6 0.0 0.15 11.0 0.0 1.7 2 0 0 2 2 2 0 L-seryl-tRNA selenium transferase Pyr_redox_2 PF07992.14 gi|121636304|ref|YP_976527.1| - 3e-52 177.7 2.3 3.9e-52 177.3 2.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121636304|ref|YP_976527.1| - 1.5e-12 47.9 1.1 4.3e-06 27.2 0.1 3.4 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121636304|ref|YP_976527.1| - 5.4e-05 22.4 10.1 0.017 14.2 0.1 4.0 4 1 1 5 5 5 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|121636304|ref|YP_976527.1| - 9.7e-05 22.5 0.6 0.001 19.2 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|121636304|ref|YP_976527.1| - 0.00035 19.8 0.0 0.00086 18.5 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|121636304|ref|YP_976527.1| - 0.00064 19.1 2.6 0.13 11.5 0.1 3.1 2 2 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|121636304|ref|YP_976527.1| - 0.00071 18.9 0.3 0.015 14.5 0.0 2.2 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 gi|121636304|ref|YP_976527.1| - 0.0049 16.5 5.9 0.91 9.0 0.1 3.9 4 0 0 4 4 4 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|121636304|ref|YP_976527.1| - 0.011 15.7 2.2 3.7 7.5 0.1 3.2 3 0 0 3 3 3 0 FAD-NAD(P)-binding Thi4 PF01946.17 gi|121636304|ref|YP_976527.1| - 0.024 13.9 0.1 0.71 9.1 0.1 2.5 2 0 0 2 2 2 0 Thi4 family NAD_binding_7 PF13241.6 gi|121636304|ref|YP_976527.1| - 0.028 14.8 0.1 0.15 12.5 0.1 2.3 1 1 0 1 1 1 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|121636304|ref|YP_976527.1| - 0.043 13.1 4.1 0.07 12.4 0.1 2.8 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 gi|121636304|ref|YP_976527.1| - 0.09 11.5 2.6 0.88 8.2 0.0 3.1 3 0 0 3 3 3 0 HI0933-like protein DUF222 PF02720.17 gi|121636305|ref|YP_976528.1| - 3.4e-45 154.8 13.5 6.5e-45 153.9 13.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121636305|ref|YP_976528.1| - 0.013 15.6 1.7 0.027 14.6 1.7 1.5 1 0 0 1 1 1 0 HNH endonuclease Nbs1_C PF08599.10 gi|121636306|ref|YP_976529.1| - 0.22 11.7 0.0 0.44 10.7 0.0 1.6 1 0 0 1 1 1 0 DNA damage repair protein Nbs1 PLDc_2 PF13091.6 gi|121636308|ref|YP_976531.1| - 0.022 14.6 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 PLD-like domain Beta-lactamase PF00144.24 gi|121636311|ref|YP_976534.1| - 5.2e-57 193.6 2.2 6e-57 193.4 2.2 1.0 1 0 0 1 1 1 1 Beta-lactamase Acyl-CoA_dh_1 PF00441.24 gi|121636312|ref|YP_976535.1| - 4.4e-28 98.4 0.2 7.5e-28 97.6 0.2 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121636312|ref|YP_976535.1| - 1.3e-27 96.7 0.1 3.1e-27 95.5 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636312|ref|YP_976535.1| - 6.6e-25 87.1 0.0 1.3e-24 86.2 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636312|ref|YP_976535.1| - 1.2e-08 35.3 0.0 2.8e-08 34.1 0.0 1.6 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DUF3054 PF11255.8 gi|121636313|ref|YP_976536.1| - 3.6e-34 117.6 17.8 4.2e-34 117.4 17.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3054) MMPL PF03176.15 gi|121636314|ref|YP_976537.1| - 5.5e-102 341.1 11.6 6.3e-102 340.9 11.6 1.0 1 0 0 1 1 1 1 MMPL family WBS28 PF15164.6 gi|121636314|ref|YP_976537.1| - 0.1 11.9 3.7 0.22 10.8 3.7 1.5 1 0 0 1 1 1 0 Williams-Beuren syndrome chromosomal region 28 protein homologue CENP-H PF05837.12 gi|121636314|ref|YP_976537.1| - 0.13 12.7 0.2 0.22 12.0 0.2 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) SKA2 PF16740.5 gi|121636314|ref|YP_976537.1| - 0.13 12.1 1.0 0.19 11.5 1.0 1.3 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DUF1440 PF07274.12 gi|121636314|ref|YP_976537.1| - 0.33 11.3 3.3 0.78 10.1 3.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) Mce4_CUP1 PF11887.8 gi|121636314|ref|YP_976537.1| - 1.4 8.4 3.9 2.1 7.7 3.9 1.2 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative MMPL PF03176.15 gi|121636315|ref|YP_976538.1| - 3.2e-113 378.0 6.6 3.2e-113 378.0 6.6 2.1 2 1 0 2 2 2 1 MMPL family Troponin PF00992.20 gi|121636315|ref|YP_976538.1| - 0.024 14.9 0.1 0.037 14.3 0.1 1.2 1 0 0 1 1 1 0 Troponin Sec34 PF04136.15 gi|121636315|ref|YP_976538.1| - 0.13 12.2 0.6 0.24 11.2 0.6 1.4 1 0 0 1 1 1 0 Sec34-like family AAA_13 PF13166.6 gi|121636315|ref|YP_976538.1| - 0.22 10.1 0.4 0.31 9.6 0.4 1.1 1 0 0 1 1 1 0 AAA domain ACR_tran PF00873.19 gi|121636315|ref|YP_976538.1| - 0.35 8.5 11.6 0.008 13.9 3.2 2.0 1 1 1 2 2 2 0 AcrB/AcrD/AcrF family Laminin_II PF06009.12 gi|121636315|ref|YP_976538.1| - 0.92 9.5 4.1 0.25 11.4 0.9 1.6 2 0 0 2 2 2 0 Laminin Domain II DASH_Dam1 PF08653.10 gi|121636315|ref|YP_976538.1| - 0.99 9.3 3.2 14 5.6 0.2 2.9 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF962 PF06127.11 gi|121636315|ref|YP_976538.1| - 2.9 8.0 5.6 4.6 7.4 0.4 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF962) Mycobact_memb PF05423.13 gi|121636316|ref|YP_976539.1| - 1.5e-66 222.5 1.6 1.7e-66 222.4 1.6 1.0 1 0 0 1 1 1 1 Mycobacterium membrane protein AMP-binding PF00501.28 gi|121636317|ref|YP_976540.1| - 6.2e-65 219.4 0.0 1e-64 218.8 0.0 1.3 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|121636317|ref|YP_976540.1| - 0.083 13.2 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain p12I PF12233.8 gi|121636317|ref|YP_976540.1| - 0.53 10.8 2.9 1.1 9.8 2.9 1.5 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein ketoacyl-synt PF00109.26 gi|121636318|ref|YP_976541.1| - 2.8e-85 285.9 0.0 4e-85 285.4 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|121636318|ref|YP_976541.1| - 1.9e-36 124.6 0.1 4e-36 123.6 0.1 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain PP-binding PF00550.25 gi|121636318|ref|YP_976541.1| - 1.2e-05 25.6 0.0 2.3e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Thiolase_N PF00108.23 gi|121636318|ref|YP_976541.1| - 3.8e-05 23.2 0.1 0.0001 21.8 0.1 1.6 2 0 0 2 2 2 1 Thiolase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121636319|ref|YP_976542.1| - 3.2e-62 210.9 1.3 5.2e-62 210.2 1.3 1.3 1 0 0 1 1 1 1 Acyl transferase domain KAsynt_C_assoc PF16197.5 gi|121636319|ref|YP_976542.1| - 1.1e-16 61.3 0.0 4.1e-16 59.4 0.0 2.0 2 0 0 2 2 2 1 Ketoacyl-synthetase C-terminal extension Thioesterase PF00975.20 gi|121636319|ref|YP_976542.1| - 3.8e-15 56.6 0.0 1.9e-13 51.0 0.0 3.0 3 0 0 3 3 3 1 Thioesterase domain PP-binding PF00550.25 gi|121636319|ref|YP_976542.1| - 5.8e-12 45.8 0.0 1.5e-11 44.4 0.0 1.8 1 0 0 1 1 1 1 Phosphopantetheine attachment site Abhydrolase_3 PF07859.13 gi|121636319|ref|YP_976542.1| - 0.0061 16.4 0.4 0.049 13.5 0.0 2.3 2 0 0 2 2 2 1 alpha/beta hydrolase fold Lactamase_B PF00753.27 gi|121636320|ref|YP_976543.1| - 4.7e-36 124.7 5.2 5.7e-36 124.4 5.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121636320|ref|YP_976543.1| - 1e-06 28.4 0.1 1.5e-06 27.9 0.1 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|121636320|ref|YP_976543.1| - 0.011 15.2 0.0 0.019 14.4 0.0 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Agglutinin_C PF18021.1 gi|121636320|ref|YP_976543.1| - 0.23 12.0 0.0 0.43 11.1 0.0 1.4 1 0 0 1 1 1 0 Agglutinin C-terminal Bac_luciferase PF00296.20 gi|121636321|ref|YP_976544.1| - 3.3e-65 220.6 1.5 4e-65 220.3 1.5 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PTA_PTB PF01515.19 gi|121636322|ref|YP_976545.1| - 1e-134 448.9 0.1 1.4e-134 448.4 0.1 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DRTGG PF07085.12 gi|121636322|ref|YP_976545.1| - 1.3e-23 82.8 1.6 4.5e-23 81.0 0.3 2.6 2 0 0 2 2 2 1 DRTGG domain AAA_26 PF13500.6 gi|121636322|ref|YP_976545.1| - 2e-23 83.3 0.1 4e-23 82.3 0.1 1.5 1 0 0 1 1 1 1 AAA domain Acetate_kinase PF00871.17 gi|121636323|ref|YP_976546.1| - 5.4e-128 427.0 0.0 5.4e-127 423.7 0.0 1.9 1 1 0 1 1 1 1 Acetokinase family PknG_TPR PF16918.5 gi|121636324|ref|YP_976547.1| - 3.4e-152 506.1 6.3 4.6e-152 505.6 6.3 1.2 1 0 0 1 1 1 1 Protein kinase G tetratricopeptide repeat PknG_rubred PF16919.5 gi|121636324|ref|YP_976547.1| - 5.3e-63 211.3 0.2 9.9e-63 210.4 0.2 1.5 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain Pkinase PF00069.25 gi|121636324|ref|YP_976547.1| - 1.4e-31 109.9 0.0 2.4e-31 109.1 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121636324|ref|YP_976547.1| - 1.3e-12 47.6 0.0 1.9e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase TPR_19 PF14559.6 gi|121636324|ref|YP_976547.1| - 5.8e-06 26.7 0.0 0.063 13.8 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat APH PF01636.23 gi|121636324|ref|YP_976547.1| - 0.0008 19.4 0.7 0.25 11.2 0.0 3.2 2 2 1 3 3 3 2 Phosphotransferase enzyme family RIO1 PF01163.22 gi|121636324|ref|YP_976547.1| - 0.0043 16.7 0.0 0.0074 15.9 0.0 1.3 1 0 0 1 1 1 1 RIO1 family TPR_2 PF07719.17 gi|121636324|ref|YP_976547.1| - 0.0071 16.4 0.1 0.22 11.7 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|121636324|ref|YP_976547.1| - 0.0079 16.8 6.5 0.016 15.9 0.0 4.0 5 0 0 5 5 4 1 Tetratricopeptide repeat zinc_ribbon_2 PF13240.6 gi|121636324|ref|YP_976547.1| - 0.0095 15.6 0.6 0.028 14.1 0.6 1.8 1 1 0 1 1 1 1 zinc-ribbon domain RPN7 PF10602.9 gi|121636324|ref|YP_976547.1| - 0.025 14.3 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 26S proteasome subunit RPN7 DZR PF12773.7 gi|121636324|ref|YP_976547.1| - 0.027 14.5 0.2 0.049 13.7 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon BON PF04972.17 gi|121636324|ref|YP_976547.1| - 0.069 13.5 2.0 25 5.3 0.1 3.5 3 0 0 3 3 3 0 BON domain TPR_6 PF13174.6 gi|121636324|ref|YP_976547.1| - 0.088 13.5 0.1 15 6.4 0.0 3.4 4 0 0 4 4 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 gi|121636324|ref|YP_976547.1| - 0.14 12.5 0.3 4.8 7.5 0.0 3.5 3 1 0 4 4 4 0 Tetratricopeptide repeat zf-ribbon_3 PF13248.6 gi|121636324|ref|YP_976547.1| - 0.19 11.2 5.5 1.7 8.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TPR_14 PF13428.6 gi|121636324|ref|YP_976547.1| - 0.27 12.1 0.1 0.27 12.1 0.1 4.9 5 1 1 6 6 4 0 Tetratricopeptide repeat zf-NADH-PPase PF09297.11 gi|121636324|ref|YP_976547.1| - 0.76 9.5 2.7 18 5.1 0.3 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain HscB_4_cys PF18256.1 gi|121636324|ref|YP_976547.1| - 0.82 9.5 5.2 3 7.7 5.4 1.9 1 1 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif SBP_bac_3 PF00497.20 gi|121636325|ref|YP_976548.1| - 3.6e-53 180.3 0.0 5e-53 179.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|121636325|ref|YP_976548.1| - 0.00095 19.3 0.0 0.0026 18.0 0.0 1.7 2 0 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 gi|121636325|ref|YP_976548.1| - 0.024 14.6 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 NMT1/THI5 like 4HB_MCP_1 PF12729.7 gi|121636326|ref|YP_976549.1| - 0.022 14.3 2.4 0.042 13.4 1.1 2.0 2 1 0 2 2 2 0 Four helix bundle sensory module for signal transduction HRG PF16954.5 gi|121636326|ref|YP_976549.1| - 0.12 12.8 1.2 7.1 7.1 0.1 2.7 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene GAT PF03127.14 gi|121636326|ref|YP_976549.1| - 0.15 12.4 0.0 1.1 9.6 0.0 2.4 2 0 0 2 2 2 0 GAT domain NUDIX PF00293.28 gi|121636327|ref|YP_976550.1| - 5.4e-17 62.1 0.5 9.2e-17 61.3 0.5 1.3 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|121636327|ref|YP_976550.1| - 1.8e-06 27.9 0.3 8.2e-06 25.8 0.2 1.9 2 0 0 2 2 2 1 NUDIX domain TMP-TENI PF02581.17 gi|121636328|ref|YP_976551.1| - 7.3e-53 178.6 0.0 8.7e-53 178.3 0.0 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase OMPdecase PF00215.24 gi|121636328|ref|YP_976551.1| - 0.0069 16.0 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family bPH_6 PF10756.9 gi|121636328|ref|YP_976551.1| - 0.1 12.7 3.4 0.13 12.4 0.9 2.4 2 0 0 2 2 2 0 Bacterial PH domain DAO PF01266.24 gi|121636329|ref|YP_976552.1| - 5.9e-49 167.5 6.3 7.4e-49 167.2 6.3 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|121636329|ref|YP_976552.1| - 0.0062 16.4 0.4 0.0097 15.8 0.4 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|121636329|ref|YP_976552.1| - 0.013 14.7 0.1 0.024 13.9 0.1 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|121636329|ref|YP_976552.1| - 0.018 14.4 0.1 0.036 13.4 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|121636329|ref|YP_976552.1| - 0.068 13.7 0.4 0.26 11.9 0.1 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|121636329|ref|YP_976552.1| - 0.086 12.1 0.3 0.13 11.6 0.3 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 gi|121636329|ref|YP_976552.1| - 0.11 11.5 2.0 0.22 10.6 2.0 1.4 1 0 0 1 1 1 0 FAD binding domain NAD_binding_2 PF03446.15 gi|121636329|ref|YP_976552.1| - 0.13 12.4 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|121636329|ref|YP_976552.1| - 0.16 12.5 0.7 0.39 11.3 0.2 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent ThiS PF02597.20 gi|121636330|ref|YP_976553.1| - 1.7e-12 47.8 0.2 2e-12 47.5 0.2 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 gi|121636330|ref|YP_976553.1| - 0.0031 17.5 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 ThiS-like ubiquitin ThiG PF05690.14 gi|121636331|ref|YP_976554.1| - 4.8e-107 356.9 5.1 5.4e-107 356.7 5.1 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|121636331|ref|YP_976554.1| - 0.00046 19.3 4.5 0.011 14.8 1.5 2.2 1 1 0 2 2 2 2 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|121636331|ref|YP_976554.1| - 0.0014 18.2 0.1 0.026 14.0 0.1 2.2 2 0 0 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 gi|121636331|ref|YP_976554.1| - 0.041 13.1 0.2 0.17 11.0 0.1 1.9 1 1 1 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase HPP PF04982.13 gi|121636331|ref|YP_976554.1| - 0.15 12.3 5.3 0.35 11.1 5.3 1.6 1 0 0 1 1 1 0 HPP family IMPDH PF00478.25 gi|121636331|ref|YP_976554.1| - 0.89 8.5 6.4 0.15 11.0 2.4 1.6 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Peptidase_M28 PF04389.17 gi|121636332|ref|YP_976555.1| - 3.2e-47 160.8 0.0 4.3e-47 160.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 PA PF02225.22 gi|121636332|ref|YP_976555.1| - 3.9e-13 49.2 0.8 1.2e-12 47.7 0.8 1.9 1 0 0 1 1 1 1 PA domain Peptidase_M20 PF01546.28 gi|121636332|ref|YP_976555.1| - 1.9e-06 27.7 0.0 3.2e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 gi|121636332|ref|YP_976555.1| - 0.0057 15.7 0.0 0.044 12.8 0.0 2.1 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase Nicastrin PF05450.15 gi|121636332|ref|YP_976555.1| - 0.04 13.4 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 Nicastrin Zn_peptidase PF04228.13 gi|121636333|ref|YP_976556.1| - 0.00016 21.2 2.6 0.0073 15.8 0.4 3.7 3 1 0 3 3 3 1 Putative neutral zinc metallopeptidase 7tm_3 PF00003.22 gi|121636334|ref|YP_976557.1| - 0.043 13.6 0.0 0.047 13.4 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR Phage_holin_2_4 PF16082.5 gi|121636334|ref|YP_976557.1| - 0.045 13.5 1.3 0.29 10.9 0.2 2.2 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Hydrolase_4 PF12146.8 gi|121636335|ref|YP_976558.1| - 1.8e-05 24.1 0.2 0.4 9.9 0.0 3.0 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121636335|ref|YP_976558.1| - 0.0011 19.6 9.0 0.012 16.2 9.0 2.0 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 gi|121636335|ref|YP_976558.1| - 0.0033 17.2 0.0 0.0059 16.4 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 gi|121636335|ref|YP_976558.1| - 0.0079 15.8 0.0 0.56 9.7 0.0 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|121636335|ref|YP_976558.1| - 0.029 14.0 0.1 0.046 13.4 0.1 1.5 1 1 0 1 1 1 0 alpha/beta hydrolase fold Phos_pyr_kin PF08543.12 gi|121636336|ref|YP_976559.1| - 2e-87 292.6 0.0 2.3e-87 292.5 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|121636336|ref|YP_976559.1| - 3.7e-11 42.9 0.0 5.9e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ThiC_Rad_SAM PF01964.18 gi|121636337|ref|YP_976560.1| - 7.8e-199 660.7 0.0 9.4e-199 660.4 0.0 1.1 1 0 0 1 1 1 1 Radical SAM ThiC family ThiC-associated PF13667.6 gi|121636337|ref|YP_976560.1| - 1.4e-09 37.6 0.1 5e-09 35.9 0.1 1.9 1 1 0 1 1 1 1 ThiC-associated domain E1-E2_ATPase PF00122.20 gi|121636339|ref|YP_976562.1| - 6.3e-45 152.9 4.6 1.6e-44 151.6 0.5 3.2 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121636339|ref|YP_976562.1| - 3.2e-22 79.9 5.1 1.9e-21 77.3 3.3 2.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 gi|121636339|ref|YP_976562.1| - 8.4e-16 58.2 2.7 1.7e-15 57.2 2.7 1.5 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 gi|121636339|ref|YP_976562.1| - 0.008 16.2 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HMA PF00403.26 gi|121636339|ref|YP_976562.1| - 0.0083 16.5 0.0 0.047 14.1 0.0 2.4 2 0 0 2 2 2 1 Heavy-metal-associated domain DUF742 PF05331.11 gi|121636339|ref|YP_976562.1| - 0.016 15.0 7.5 0.029 14.2 0.5 3.6 2 0 0 2 2 2 0 Protein of unknown function (DUF742) Exo_endo_phos PF03372.23 gi|121636341|ref|YP_976564.1| - 2.3e-21 76.4 1.9 2.9e-21 76.1 1.9 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Msg2_C PF12373.8 gi|121636341|ref|YP_976564.1| - 0.17 11.3 0.0 0.32 10.5 0.0 1.4 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Phage_Integr_2 PF13009.6 gi|121636342|ref|YP_976565.1| - 0.22 10.6 0.0 0.32 10.1 0.0 1.1 1 0 0 1 1 1 0 Putative phage integrase Pep_deformylase PF01327.21 gi|121636343|ref|YP_976566.1| - 9.7e-38 129.3 0.0 1.2e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Polypeptide deformylase DUF3263 PF11662.8 gi|121636344|ref|YP_976567.1| - 3.8e-36 122.8 2.3 4.8e-36 122.4 2.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3263) LytR_C PF13399.6 gi|121636345|ref|YP_976568.1| - 1.6e-13 51.4 2.1 1.6e-13 51.4 2.1 1.5 2 0 0 2 2 2 1 LytR cell envelope-related transcriptional attenuator DUF3185 PF11381.8 gi|121636345|ref|YP_976568.1| - 0.034 14.2 0.0 0.074 13.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) Sod_Cu PF00080.20 gi|121636346|ref|YP_976569.1| - 2.5e-28 99.0 1.3 3.4e-28 98.6 1.3 1.1 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) GCS2 PF04107.13 gi|121636347|ref|YP_976570.1| - 1.8e-94 316.3 0.2 2.3e-94 316.0 0.2 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) LON_substr_bdg PF02190.16 gi|121636348|ref|YP_976571.1| - 6.3e-23 81.8 0.0 7.1e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 gi|121636349|ref|YP_976572.1| - 7.4e-56 188.2 0.0 6.6e-39 133.4 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|121636349|ref|YP_976572.1| - 1e-22 79.6 8.0 6.4e-11 41.9 0.1 2.6 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|121636349|ref|YP_976572.1| - 2.2e-14 53.4 0.1 8e-14 51.6 0.2 1.9 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 gi|121636349|ref|YP_976572.1| - 3.7e-11 43.7 11.3 0.00058 20.3 0.1 4.5 3 1 1 4 4 4 2 AAA ATPase domain AAA_5 PF07728.14 gi|121636349|ref|YP_976572.1| - 1.1e-06 28.7 0.7 0.00041 20.4 0.0 3.3 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|121636349|ref|YP_976572.1| - 6.7e-06 26.3 0.0 0.24 11.6 0.0 3.0 3 0 0 3 3 3 2 AAA domain AAA_18 PF13238.6 gi|121636349|ref|YP_976572.1| - 2.1e-05 25.1 0.1 0.034 14.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|121636349|ref|YP_976572.1| - 4.1e-05 23.9 2.1 0.061 13.6 0.1 4.0 3 2 2 5 5 4 1 AAA domain AAA_28 PF13521.6 gi|121636349|ref|YP_976572.1| - 0.0002 21.6 0.5 0.021 15.1 0.0 3.2 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 gi|121636349|ref|YP_976572.1| - 0.00025 20.9 0.1 0.033 13.9 0.0 3.0 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase TsaE PF02367.17 gi|121636349|ref|YP_976572.1| - 0.00029 20.8 0.1 0.97 9.4 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|121636349|ref|YP_976572.1| - 0.00033 20.4 2.2 1.2 8.8 1.4 3.4 3 1 0 3 3 3 2 AAA domain NACHT PF05729.12 gi|121636349|ref|YP_976572.1| - 0.00045 20.2 2.5 1.5 8.7 0.0 3.6 4 0 0 4 4 3 2 NACHT domain RuvB_N PF05496.12 gi|121636349|ref|YP_976572.1| - 0.00056 19.7 0.1 0.11 12.2 0.0 2.6 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|121636349|ref|YP_976572.1| - 0.00063 19.7 0.1 0.1 12.5 0.0 2.3 2 0 0 2 2 2 1 Rad17 P-loop domain RNA_helicase PF00910.22 gi|121636349|ref|YP_976572.1| - 0.00081 19.7 0.0 0.17 12.3 0.0 2.3 2 0 0 2 2 2 1 RNA helicase AAA_2 PF07724.14 gi|121636349|ref|YP_976572.1| - 0.00096 19.3 0.0 0.0062 16.7 0.0 2.1 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) ATPase_2 PF01637.18 gi|121636349|ref|YP_976572.1| - 0.0016 18.4 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|121636349|ref|YP_976572.1| - 0.003 17.1 3.4 0.038 13.6 0.2 3.7 3 1 0 3 3 3 1 AAA domain ABC_tran PF00005.27 gi|121636349|ref|YP_976572.1| - 0.0031 18.0 0.0 1.1 9.7 0.0 2.5 2 0 0 2 2 2 1 ABC transporter IstB_IS21 PF01695.17 gi|121636349|ref|YP_976572.1| - 0.0044 16.8 0.1 0.38 10.5 0.0 2.6 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_14 PF13173.6 gi|121636349|ref|YP_976572.1| - 0.0046 17.0 0.0 0.14 12.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain Molydop_binding PF01568.21 gi|121636349|ref|YP_976572.1| - 0.0046 17.0 0.0 0.026 14.5 0.1 2.3 2 1 0 2 2 1 1 Molydopterin dinucleotide binding domain DUF815 PF05673.13 gi|121636349|ref|YP_976572.1| - 0.0058 15.8 0.0 1.4 8.0 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 gi|121636349|ref|YP_976572.1| - 0.0067 16.1 0.0 0.82 9.5 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|121636349|ref|YP_976572.1| - 0.0082 15.7 0.1 0.95 8.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 gi|121636349|ref|YP_976572.1| - 0.0089 15.8 0.0 1 9.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|121636349|ref|YP_976572.1| - 0.0091 15.7 0.0 9.4 5.9 0.0 3.4 3 1 1 4 4 3 0 Sigma-54 interaction domain RsgA_GTPase PF03193.16 gi|121636349|ref|YP_976572.1| - 0.0093 15.9 0.0 2.2 8.1 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_19 PF13245.6 gi|121636349|ref|YP_976572.1| - 0.012 16.0 0.7 2 8.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|121636349|ref|YP_976572.1| - 0.014 14.8 0.5 0.42 10.0 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Adeno_IVa2 PF02456.15 gi|121636349|ref|YP_976572.1| - 0.014 14.2 0.1 0.93 8.2 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein Sigma54_activ_2 PF14532.6 gi|121636349|ref|YP_976572.1| - 0.014 15.5 0.0 1.9 8.6 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|121636349|ref|YP_976572.1| - 0.015 15.2 0.2 1.3 8.9 0.1 2.9 3 0 0 3 3 3 0 NTPase AAA_11 PF13086.6 gi|121636349|ref|YP_976572.1| - 0.028 14.2 0.0 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AFG1_ATPase PF03969.16 gi|121636349|ref|YP_976572.1| - 0.034 13.0 2.1 2.8 6.8 0.0 2.6 3 0 0 3 3 3 0 AFG1-like ATPase AAA_17 PF13207.6 gi|121636349|ref|YP_976572.1| - 0.034 14.6 0.0 1.2 9.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|121636349|ref|YP_976572.1| - 0.057 12.6 0.2 2.3 7.3 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain cobW PF02492.19 gi|121636349|ref|YP_976572.1| - 0.18 11.4 0.7 7.4 6.1 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 gi|121636349|ref|YP_976572.1| - 0.21 11.3 0.4 4.1 7.1 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein CDP-OH_P_transf PF01066.21 gi|121636350|ref|YP_976573.1| - 9.3e-11 42.3 0.7 9.3e-11 42.3 0.7 3.0 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase PS_Dcarbxylase PF02666.15 gi|121636351|ref|YP_976574.1| - 2.5e-32 112.1 0.0 7.6e-32 110.5 0.0 1.7 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase RnfC_N PF13375.6 gi|121636351|ref|YP_976574.1| - 0.043 13.8 0.1 11 6.1 0.0 3.2 3 0 0 3 3 3 0 RnfC Barrel sandwich hybrid domain DUF4131 PF13567.6 gi|121636351|ref|YP_976574.1| - 0.092 12.4 0.7 0.51 10.0 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) MoeA_N PF03453.17 gi|121636352|ref|YP_976575.1| - 1.2e-42 145.4 5.6 1.2e-42 145.4 5.6 2.1 2 1 1 3 3 3 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|121636352|ref|YP_976575.1| - 3.8e-25 88.2 0.1 6e-25 87.6 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|121636352|ref|YP_976575.1| - 1e-15 57.6 0.0 6e-15 55.2 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Phage_Coat_B PF05356.11 gi|121636352|ref|YP_976575.1| - 1.1 9.2 0.0 1.1 9.2 0.0 3.0 3 0 0 3 3 3 0 Phage Coat protein B adh_short PF00106.25 gi|121636353|ref|YP_976576.1| - 6.5e-29 100.8 0.2 8.1e-28 97.2 0.2 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636353|ref|YP_976576.1| - 2.3e-19 69.9 0.2 5e-19 68.8 0.2 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636353|ref|YP_976576.1| - 2.2e-08 34.2 0.2 3.2e-08 33.7 0.2 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121636353|ref|YP_976576.1| - 2.4e-05 23.9 0.0 3.6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121636353|ref|YP_976576.1| - 0.02 14.8 0.4 0.033 14.1 0.4 1.4 1 0 0 1 1 1 0 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 gi|121636353|ref|YP_976576.1| - 0.022 14.1 0.0 0.046 13.1 0.0 1.6 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase Cpn60_TCP1 PF00118.24 gi|121636354|ref|YP_976577.1| - 2.1e-96 323.5 12.7 2.9e-96 323.1 12.7 1.2 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PPE PF00823.19 gi|121636356|ref|YP_976579.1| - 3e-55 186.6 29.2 3e-55 186.6 29.2 1.6 2 0 0 2 2 2 1 PPE family Pentapeptide_2 PF01469.18 gi|121636356|ref|YP_976579.1| - 6.8e-22 77.1 146.6 4.6e-09 36.0 30.2 7.2 3 3 3 6 6 6 5 Pentapeptide repeats (8 copies) DUF664 PF04978.12 gi|121636357|ref|YP_976580.1| - 2.3e-41 141.7 0.8 3.4e-41 141.1 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF664) DinB_2 PF12867.7 gi|121636357|ref|YP_976580.1| - 1.2e-14 54.9 1.0 1.6e-14 54.5 1.0 1.2 1 0 0 1 1 1 1 DinB superfamily RskA PF10099.9 gi|121636358|ref|YP_976581.1| - 2.4e-24 86.6 23.9 7.5e-24 85.0 23.9 1.7 1 1 0 1 1 1 1 Anti-sigma-K factor rskA DUF3379 PF11859.8 gi|121636358|ref|YP_976581.1| - 0.17 11.2 0.2 0.23 10.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) Sigma70_r2 PF04542.14 gi|121636359|ref|YP_976582.1| - 2e-14 53.1 2.5 3.2e-14 52.5 0.2 2.3 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121636359|ref|YP_976582.1| - 2.7e-13 49.2 0.1 2.7e-13 49.2 0.1 2.2 4 0 0 4 4 4 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|121636359|ref|YP_976582.1| - 5e-11 42.1 0.9 9.7e-11 41.2 0.9 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|121636359|ref|YP_976582.1| - 0.0019 17.9 0.0 0.0046 16.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 gi|121636359|ref|YP_976582.1| - 0.0029 17.5 1.4 0.0056 16.6 1.4 1.5 1 1 0 1 1 1 1 ECF sigma factor HTH_24 PF13412.6 gi|121636359|ref|YP_976582.1| - 0.16 11.5 0.3 0.44 10.2 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF1295 PF06966.12 gi|121636360|ref|YP_976583.1| - 8.1e-78 261.2 1.3 9.4e-78 261.0 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 gi|121636360|ref|YP_976583.1| - 4.9e-06 26.9 0.1 1.5e-05 25.3 0.1 1.8 1 0 0 1 1 1 1 Phospholipid methyltransferase Steroid_dh PF02544.16 gi|121636360|ref|YP_976583.1| - 8.1e-05 22.6 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 gi|121636360|ref|YP_976583.1| - 0.00022 21.6 0.4 0.00061 20.2 0.1 1.9 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF3040 PF11239.8 gi|121636360|ref|YP_976583.1| - 7.1 7.0 9.6 0.98 9.7 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) CMAS PF02353.20 gi|121636361|ref|YP_976584.1| - 2e-105 352.0 0.0 2.3e-105 351.8 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636361|ref|YP_976584.1| - 2.6e-10 40.4 0.0 3.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636361|ref|YP_976584.1| - 1.5e-09 38.4 0.0 3.1e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636361|ref|YP_976584.1| - 1.5e-08 35.1 0.0 3.1e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636361|ref|YP_976584.1| - 3.5e-06 27.7 0.0 6.1e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636361|ref|YP_976584.1| - 2.4e-05 24.2 0.0 3.4e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121636361|ref|YP_976584.1| - 0.1 12.1 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DUF1365 PF07103.11 gi|121636362|ref|YP_976585.1| - 9.4e-54 182.6 0.0 1e-53 182.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1365) Amino_oxidase PF01593.24 gi|121636363|ref|YP_976586.1| - 9.8e-38 130.6 2.4 2.4e-37 129.3 2.4 1.6 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|121636363|ref|YP_976586.1| - 6.1e-09 36.0 0.7 2.4e-08 34.1 0.7 2.2 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121636363|ref|YP_976586.1| - 1.2e-05 25.0 5.3 1.5e-05 24.7 1.1 2.3 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121636363|ref|YP_976586.1| - 0.00036 19.8 0.6 0.00066 18.9 0.6 1.4 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|121636363|ref|YP_976586.1| - 0.0098 15.2 0.1 0.019 14.2 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|121636363|ref|YP_976586.1| - 0.036 14.6 0.5 0.72 10.5 0.2 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|121636363|ref|YP_976586.1| - 0.037 13.3 0.5 0.073 12.3 0.5 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|121636363|ref|YP_976586.1| - 0.093 12.7 1.8 31 4.5 0.0 3.5 3 0 0 3 3 3 0 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|121636363|ref|YP_976586.1| - 0.21 10.2 0.2 0.32 9.6 0.2 1.2 1 0 0 1 1 1 0 HI0933-like protein MMPL PF03176.15 gi|121636364|ref|YP_976587.1| - 4.4e-222 735.9 35.7 6.5e-121 403.3 8.3 3.4 4 0 0 4 4 4 3 MMPL family Mycobact_memb PF05423.13 gi|121636365|ref|YP_976588.1| - 7.9e-75 249.4 0.0 8.8e-75 249.2 0.0 1.0 1 0 0 1 1 1 1 Mycobacterium membrane protein TetR_C_34 PF17929.1 gi|121636366|ref|YP_976589.1| - 1.1e-28 99.8 1.4 1.1e-28 99.8 1.4 1.5 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121636366|ref|YP_976589.1| - 1.5e-05 24.7 0.6 3.3e-05 23.6 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_ISL3 PF13542.6 gi|121636366|ref|YP_976589.1| - 0.029 13.8 0.3 0.077 12.4 0.3 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 PPE PF00823.19 gi|121636367|ref|YP_976590.1| - 1.9e-58 197.0 22.2 1.9e-58 197.0 22.2 2.2 2 0 0 2 2 2 1 PPE family DUF5078 PF16877.5 gi|121636369|ref|YP_976592.1| - 3.8e-55 185.4 0.7 4.4e-55 185.2 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5078) ECH_1 PF00378.20 gi|121636370|ref|YP_976593.1| - 2.2e-29 102.5 0.0 2.8e-28 98.9 0.0 2.0 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636370|ref|YP_976593.1| - 5.5e-17 62.3 0.0 1.2e-16 61.1 0.0 1.5 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PemK_toxin PF02452.17 gi|121636371|ref|YP_976594.1| - 4.1e-11 43.3 0.0 4.3e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system Peptidase_S9 PF00326.21 gi|121636372|ref|YP_976595.1| - 2e-47 161.4 0.2 3.7e-47 160.6 0.2 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 gi|121636372|ref|YP_976595.1| - 9.3e-24 84.0 0.0 1.6e-23 83.2 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Abhydrolase_4 PF08386.10 gi|121636372|ref|YP_976595.1| - 0.19 11.9 0.0 0.53 10.4 0.0 1.7 2 0 0 2 2 2 0 TAP-like protein Aldedh PF00171.22 gi|121636373|ref|YP_976596.1| - 2.7e-159 530.6 0.0 3e-159 530.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF779 PF05610.11 gi|121636374|ref|YP_976597.1| - 1.8e-44 149.9 0.0 2.3e-44 149.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF779) Holin_9 PF16936.5 gi|121636375|ref|YP_976598.1| - 2.6e-39 133.2 13.3 2.9e-39 133.1 13.3 1.0 1 0 0 1 1 1 1 Putative holin NEMP PF10225.9 gi|121636375|ref|YP_976598.1| - 0.42 10.3 4.6 0.7 9.5 4.6 1.3 1 0 0 1 1 1 0 NEMP family DUF543 PF04418.12 gi|121636375|ref|YP_976598.1| - 0.54 10.3 6.8 1.9 8.6 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF543) Pyr_redox_2 PF07992.14 gi|121636377|ref|YP_976600.1| - 2e-62 211.1 6.2 2.5e-62 210.8 6.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|121636377|ref|YP_976600.1| - 1.1e-34 119.0 0.0 3.5e-34 117.4 0.0 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|121636377|ref|YP_976600.1| - 2.7e-21 75.9 2.2 4.4e-19 68.8 0.4 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121636377|ref|YP_976600.1| - 2.4e-08 33.6 9.6 0.0021 17.4 0.1 3.2 2 1 1 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121636377|ref|YP_976600.1| - 1.2e-07 31.5 0.9 1.2e-07 31.5 0.9 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|121636377|ref|YP_976600.1| - 1.1e-06 28.1 0.5 1.1e-06 28.1 0.5 3.4 2 1 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|121636377|ref|YP_976600.1| - 1.5e-06 27.7 2.9 0.011 15.0 0.0 3.0 2 1 1 3 3 3 2 FAD binding domain FAD_binding_2 PF00890.24 gi|121636377|ref|YP_976600.1| - 2.2e-05 23.7 9.1 2.9e-05 23.3 1.1 3.1 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 gi|121636377|ref|YP_976600.1| - 7.2e-05 22.9 2.4 0.22 11.8 0.1 2.9 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|121636377|ref|YP_976600.1| - 0.00016 20.6 10.8 0.0041 15.9 0.2 3.5 3 1 1 4 4 4 2 HI0933-like protein Thi4 PF01946.17 gi|121636377|ref|YP_976600.1| - 0.00017 20.9 1.3 0.063 12.5 0.1 2.6 2 0 0 2 2 2 2 Thi4 family 3HCDH_N PF02737.18 gi|121636377|ref|YP_976600.1| - 0.0063 16.4 0.3 0.0063 16.4 0.3 2.7 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|121636377|ref|YP_976600.1| - 0.022 14.4 0.4 0.071 12.8 0.4 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA LpxI_N PF17930.1 gi|121636377|ref|YP_976600.1| - 0.052 13.5 0.1 1.6 8.6 0.0 3.0 3 0 0 3 3 3 0 LpxI N-terminal domain Lycopene_cycl PF05834.12 gi|121636377|ref|YP_976600.1| - 0.15 11.1 4.1 1.6 7.7 0.1 2.8 2 1 1 3 3 3 0 Lycopene cyclase protein DAO PF01266.24 gi|121636377|ref|YP_976600.1| - 0.26 10.8 14.2 0.32 10.5 0.2 3.7 4 0 0 4 4 4 0 FAD dependent oxidoreductase TrkA_N PF02254.18 gi|121636377|ref|YP_976600.1| - 0.6 10.4 2.8 3.7 7.8 0.0 3.3 2 1 1 3 3 3 0 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|121636377|ref|YP_976600.1| - 2.8 7.2 8.6 2.1 7.6 0.2 3.2 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain CMD PF02627.20 gi|121636379|ref|YP_976602.1| - 5.8e-14 51.9 0.1 1.5e-13 50.6 0.0 1.7 1 1 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF2083 PF09856.9 gi|121636380|ref|YP_976603.1| - 1.3e-69 233.0 0.0 2.4e-69 232.2 0.0 1.4 1 0 0 1 1 1 1 Predicted transcriptional regulator (DUF2083) Peptidase_M78 PF06114.13 gi|121636380|ref|YP_976603.1| - 2.5e-28 98.4 0.7 9.4e-28 96.6 0.1 2.1 2 0 0 2 2 2 1 IrrE N-terminal-like domain HTH_3 PF01381.22 gi|121636380|ref|YP_976603.1| - 7.2e-12 45.2 0.0 1.7e-11 44.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|121636380|ref|YP_976603.1| - 7.6e-12 45.1 0.0 2.5e-11 43.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|121636380|ref|YP_976603.1| - 4.8e-11 42.8 0.4 2.6e-10 40.5 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|121636380|ref|YP_976603.1| - 0.00026 20.8 0.1 0.00083 19.2 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|121636380|ref|YP_976603.1| - 0.0011 18.9 0.0 0.0073 16.2 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|121636380|ref|YP_976603.1| - 0.01 16.2 0.1 0.055 13.9 0.0 2.3 3 0 0 3 3 3 0 Cro/C1-type HTH DNA-binding domain AMIN PF11741.8 gi|121636380|ref|YP_976603.1| - 0.052 13.7 0.0 0.096 12.8 0.0 1.3 1 0 0 1 1 1 0 AMIN domain Acyl-ACP_TE PF01643.17 gi|121636381|ref|YP_976604.1| - 2.3e-73 246.6 0.0 2.6e-73 246.4 0.0 1.0 1 0 0 1 1 1 1 Acyl-ACP thioesterase 4HBT PF03061.22 gi|121636381|ref|YP_976604.1| - 9.4e-06 25.9 0.2 0.033 14.6 0.0 3.0 3 1 0 3 3 3 2 Thioesterase superfamily 4HBT_2 PF13279.6 gi|121636381|ref|YP_976604.1| - 0.098 13.2 0.6 1.4 9.4 0.2 2.4 2 1 0 2 2 2 0 Thioesterase-like superfamily ICL PF00463.21 gi|121636382|ref|YP_976605.1| - 2.6e-101 339.7 3.6 9.4e-53 179.5 0.1 2.1 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 gi|121636382|ref|YP_976605.1| - 6e-17 61.9 0.1 1.2e-16 60.9 0.1 1.5 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase DUF3338 PF11819.8 gi|121636382|ref|YP_976605.1| - 0.1 12.6 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3338) 3HCDH_N PF02737.18 gi|121636383|ref|YP_976606.1| - 1e-59 201.5 1.6 1.3e-59 201.1 0.8 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|121636383|ref|YP_976606.1| - 8.8e-34 116.0 0.0 3.3e-33 114.2 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|121636383|ref|YP_976606.1| - 0.0012 19.0 1.1 0.0012 19.0 1.1 1.9 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase PALP PF00291.25 gi|121636383|ref|YP_976606.1| - 0.0037 16.7 0.6 0.0084 15.6 0.6 1.7 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme F420_oxidored PF03807.17 gi|121636383|ref|YP_976606.1| - 0.0039 17.8 0.2 0.01 16.4 0.2 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 gi|121636383|ref|YP_976606.1| - 0.0078 16.4 0.3 0.018 15.3 0.3 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|121636383|ref|YP_976606.1| - 0.0084 16.6 1.1 0.018 15.6 1.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|121636383|ref|YP_976606.1| - 0.0093 15.3 0.4 0.019 14.3 0.4 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|121636383|ref|YP_976606.1| - 0.012 14.9 0.7 0.019 14.2 0.7 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|121636383|ref|YP_976606.1| - 0.014 15.4 0.5 0.8 9.8 0.1 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|121636383|ref|YP_976606.1| - 0.015 15.7 0.4 0.031 14.7 0.4 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 gi|121636383|ref|YP_976606.1| - 0.04 13.9 0.5 0.065 13.2 0.5 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XdhC_C PF13478.6 gi|121636383|ref|YP_976606.1| - 0.065 13.7 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 gi|121636383|ref|YP_976606.1| - 0.07 12.4 0.1 0.088 12.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain MutS_III PF05192.18 gi|121636383|ref|YP_976606.1| - 0.15 12.3 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 MutS domain III Sacchrp_dh_NADP PF03435.18 gi|121636383|ref|YP_976606.1| - 0.28 11.5 2.7 4.2 7.6 2.7 2.4 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF1707 PF08044.11 gi|121636383|ref|YP_976606.1| - 1.2 9.2 6.2 0.35 11.0 0.4 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF1707) Rossmann-like PF10727.9 gi|121636383|ref|YP_976606.1| - 1.5 8.7 4.6 1.1 9.1 1.9 2.2 1 1 0 2 2 2 0 Rossmann-like domain CMAS PF02353.20 gi|121636384|ref|YP_976607.1| - 1.1e-112 375.8 0.5 1.2e-112 375.6 0.5 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636384|ref|YP_976607.1| - 2.7e-09 37.1 0.0 3.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636384|ref|YP_976607.1| - 5.9e-09 36.5 0.1 2.9e-08 34.3 0.0 2.2 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636384|ref|YP_976607.1| - 2.5e-08 34.5 0.0 6e-08 33.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636384|ref|YP_976607.1| - 1.7e-06 28.6 0.0 3.8e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636384|ref|YP_976607.1| - 2.7e-05 24.0 0.1 0.00092 19.0 0.0 2.3 1 1 1 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|121636384|ref|YP_976607.1| - 0.013 15.2 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|121636384|ref|YP_976607.1| - 0.013 15.0 0.0 0.029 13.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain MetW PF07021.12 gi|121636384|ref|YP_976607.1| - 0.033 13.8 0.2 0.23 11.1 0.0 2.1 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_4 PF02390.17 gi|121636384|ref|YP_976607.1| - 0.06 12.8 0.0 0.55 9.7 0.0 2.2 2 1 0 2 2 2 0 Putative methyltransferase CMAS PF02353.20 gi|121636385|ref|YP_976608.1| - 1.4e-119 398.4 0.1 1.6e-119 398.2 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636385|ref|YP_976608.1| - 1.1e-08 35.0 0.0 1.5e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636385|ref|YP_976608.1| - 1.8e-08 35.0 0.0 4e-08 33.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636385|ref|YP_976608.1| - 1.4e-06 28.8 0.0 3.4e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636385|ref|YP_976608.1| - 2.2e-05 25.1 0.0 4e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|121636385|ref|YP_976608.1| - 0.0055 15.7 0.0 0.012 14.6 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_2 PF00891.18 gi|121636385|ref|YP_976608.1| - 0.0073 15.6 0.0 0.012 14.9 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase domain RrnaAD PF00398.20 gi|121636385|ref|YP_976608.1| - 0.084 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 gi|121636385|ref|YP_976608.1| - 0.096 12.5 0.0 0.21 11.4 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 gi|121636385|ref|YP_976608.1| - 0.11 12.0 0.0 0.45 10.0 0.0 1.9 1 1 1 2 2 2 0 Methyltransferase small domain UbiA PF01040.18 gi|121636386|ref|YP_976609.1| - 7.4e-07 28.7 0.5 9.2e-07 28.4 0.5 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family UbiA PF01040.18 gi|121636387|ref|YP_976610.1| - 0.018 14.4 0.6 0.024 14.0 0.6 1.3 1 0 0 1 1 1 0 UbiA prenyltransferase family TetR_N PF00440.23 gi|121636388|ref|YP_976611.1| - 1.8e-08 34.0 0.0 3.1e-08 33.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_33 PF13305.6 gi|121636388|ref|YP_976611.1| - 0.002 18.8 0.0 0.0035 18.1 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_3 PF01381.22 gi|121636388|ref|YP_976611.1| - 0.0074 16.3 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_24 PF13412.6 gi|121636388|ref|YP_976611.1| - 0.0092 15.5 0.0 0.044 13.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Tnp_1_2 PF13022.6 gi|121636388|ref|YP_976611.1| - 0.017 15.2 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase HTH_11 PF08279.12 gi|121636388|ref|YP_976611.1| - 0.02 14.8 0.0 0.078 12.9 0.0 2.0 2 0 0 2 2 2 0 HTH domain HTH_7 PF02796.15 gi|121636388|ref|YP_976611.1| - 0.062 13.4 0.6 0.2 11.7 0.6 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_17 PF12728.7 gi|121636388|ref|YP_976611.1| - 0.072 13.3 0.2 1 9.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TetR_C_15 PF17918.1 gi|121636388|ref|YP_976611.1| - 0.08 13.7 0.2 0.26 12.0 0.1 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF445 PF04286.12 gi|121636389|ref|YP_976612.1| - 5e-105 352.3 0.3 5.9e-105 352.1 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF445) DUF3640 PF12342.8 gi|121636389|ref|YP_976612.1| - 0.095 12.5 0.5 0.19 11.5 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3640) Activator-TraM PF11657.8 gi|121636389|ref|YP_976612.1| - 0.2 11.5 2.7 11 5.8 0.1 2.6 2 0 0 2 2 2 0 Transcriptional activator TraM HTH_3 PF01381.22 gi|121636390|ref|YP_976613.1| - 7e-15 54.8 0.1 1.2e-14 54.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121636390|ref|YP_976613.1| - 1e-12 48.2 0.1 1.6e-12 47.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121636390|ref|YP_976613.1| - 1.8e-06 27.8 0.0 2.7e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|121636390|ref|YP_976613.1| - 0.00055 20.2 0.0 0.0019 18.5 0.0 1.8 1 1 0 2 2 2 1 Transcriptional regulator HTH_37 PF13744.6 gi|121636390|ref|YP_976613.1| - 0.00078 19.4 0.1 0.0014 18.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TetR_N PF00440.23 gi|121636390|ref|YP_976613.1| - 0.0014 18.3 0.1 0.45 10.4 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory proteins, tetR family HTH_25 PF13413.6 gi|121636390|ref|YP_976613.1| - 0.017 14.9 0.2 0.16 11.9 0.2 2.1 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 gi|121636390|ref|YP_976613.1| - 0.02 15.3 0.0 0.044 14.2 0.0 1.6 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 gi|121636390|ref|YP_976613.1| - 0.024 14.2 0.2 0.065 12.8 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_6 PF01418.17 gi|121636390|ref|YP_976613.1| - 0.042 13.8 0.3 0.46 10.5 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain, rpiR family Apolipoprotein PF01442.18 gi|121636391|ref|YP_976614.1| - 0.00059 19.8 19.4 0.00059 19.8 19.4 1.9 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain SRP54_N PF02881.19 gi|121636391|ref|YP_976614.1| - 0.0045 17.2 0.7 0.015 15.5 0.7 2.1 1 1 0 1 1 1 1 SRP54-type protein, helical bundle domain HC2 PF07382.11 gi|121636391|ref|YP_976614.1| - 0.0053 16.9 22.5 0.0069 16.5 22.5 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 ApoLp-III PF07464.11 gi|121636391|ref|YP_976614.1| - 0.015 15.3 2.6 0.031 14.4 2.6 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) MRP-S27 PF10037.9 gi|121636391|ref|YP_976614.1| - 0.017 14.0 3.2 0.023 13.6 3.2 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 Exonuc_VII_L PF02601.15 gi|121636391|ref|YP_976614.1| - 0.026 14.1 7.0 0.032 13.8 7.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prominin PF05478.11 gi|121636391|ref|YP_976614.1| - 0.043 11.8 0.2 0.05 11.6 0.2 1.0 1 0 0 1 1 1 0 Prominin SUIM_assoc PF16619.5 gi|121636391|ref|YP_976614.1| - 0.12 12.5 1.7 1.5 8.9 0.2 2.7 1 1 1 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 BST2 PF16716.5 gi|121636391|ref|YP_976614.1| - 0.14 12.7 6.5 0.41 11.3 1.4 2.5 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Spc7 PF08317.11 gi|121636391|ref|YP_976614.1| - 0.57 9.0 10.8 0.26 10.1 8.5 1.5 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF883 PF05957.13 gi|121636391|ref|YP_976614.1| - 0.66 10.6 20.9 7.4 7.3 5.4 3.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF932 PF06067.11 gi|121636391|ref|YP_976614.1| - 2.3 7.9 7.5 0.28 10.9 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF932) Stm1_N PF09598.10 gi|121636391|ref|YP_976614.1| - 3.7 8.5 12.0 8.4 7.3 12.0 1.7 1 0 0 1 1 1 0 Stm1 MRP-S26 PF14943.6 gi|121636391|ref|YP_976614.1| - 8.9 6.2 13.7 0.62 10.0 8.4 1.7 1 1 0 2 2 2 0 Mitochondrial ribosome subunit S26 DUF2516 PF10724.9 gi|121636392|ref|YP_976615.1| - 1.4e-25 89.4 5.1 1.5e-25 89.2 5.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2516) PRA1 PF03208.19 gi|121636392|ref|YP_976615.1| - 0.021 14.5 3.4 0.15 11.7 0.3 2.0 2 0 0 2 2 2 0 PRA1 family protein DPM3 PF08285.11 gi|121636392|ref|YP_976615.1| - 0.2 11.9 4.2 0.22 11.7 3.9 1.3 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Ytca PF17090.5 gi|121636392|ref|YP_976615.1| - 0.24 11.9 3.0 0.36 11.4 0.4 2.1 2 0 0 2 2 2 0 Uncharacterised protein family Tad PF13400.6 gi|121636392|ref|YP_976615.1| - 6.7 7.1 15.5 5.1 7.5 2.7 2.3 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like DUF2599 PF10783.9 gi|121636393|ref|YP_976616.1| - 5.6e-40 135.9 0.3 7.4e-40 135.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2599) DeoC PF01791.9 gi|121636394|ref|YP_976617.1| - 1.2e-18 67.6 9.7 1.4e-18 67.4 9.7 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase DHO_dh PF01180.21 gi|121636394|ref|YP_976617.1| - 0.00021 20.6 1.7 0.00029 20.1 0.2 1.9 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|121636394|ref|YP_976617.1| - 0.0044 16.2 0.3 0.0083 15.3 0.3 1.5 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|121636394|ref|YP_976617.1| - 0.017 14.6 1.3 0.11 12.0 0.1 2.3 1 1 0 2 2 2 0 Histidine biosynthesis protein DUF3618 PF12277.8 gi|121636394|ref|YP_976617.1| - 0.22 11.8 5.3 18 5.7 0.1 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3618) DUF2993 PF11209.8 gi|121636395|ref|YP_976618.1| - 5.4e-19 69.3 0.4 7.2e-19 68.9 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2993) CN_hydrolase PF00795.22 gi|121636396|ref|YP_976619.1| - 8.5e-39 133.4 0.1 1e-38 133.2 0.1 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF2505 PF10698.9 gi|121636397|ref|YP_976620.1| - 2.4e-45 154.5 0.1 2.7e-45 154.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2505) MurB_C PF02873.16 gi|121636398|ref|YP_976621.1| - 1.2e-38 131.9 0.0 2.1e-38 131.0 0.0 1.4 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_4 PF01565.23 gi|121636398|ref|YP_976621.1| - 4.3e-24 84.8 2.2 5.5e-23 81.2 2.6 2.3 2 0 0 2 2 2 1 FAD binding domain Big_10 PF17964.1 gi|121636399|ref|YP_976622.1| - 9.5e-65 218.0 0.2 1.3e-64 217.5 0.2 1.2 1 0 0 1 1 1 1 Bacterial Ig domain YkuD PF03734.14 gi|121636399|ref|YP_976622.1| - 5.6e-12 46.3 0.2 1.1e-11 45.4 0.2 1.5 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain adh_short PF00106.25 gi|121636400|ref|YP_976623.1| - 1.9e-45 154.7 0.6 2.4e-45 154.4 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636400|ref|YP_976623.1| - 7.2e-34 117.4 3.3 9e-34 117.0 3.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.6 gi|121636400|ref|YP_976623.1| - 2e-09 37.6 7.1 2.7e-09 37.2 7.1 1.4 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|121636400|ref|YP_976623.1| - 4.4e-09 36.5 2.5 6.6e-09 35.9 2.5 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121636400|ref|YP_976623.1| - 1.3e-07 31.3 0.8 2.2e-07 30.6 0.8 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Sacchrp_dh_NADP PF03435.18 gi|121636400|ref|YP_976623.1| - 6.8e-05 23.1 1.8 0.00013 22.2 1.5 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 gi|121636400|ref|YP_976623.1| - 0.0025 17.4 4.3 0.0059 16.2 4.3 1.7 1 1 0 1 1 1 1 NmrA-like family TrkA_N PF02254.18 gi|121636400|ref|YP_976623.1| - 0.0095 16.2 0.7 0.0095 16.2 0.7 1.8 3 0 0 3 3 3 1 TrkA-N domain Shikimate_DH PF01488.20 gi|121636400|ref|YP_976623.1| - 0.013 15.6 0.4 0.024 14.7 0.4 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|121636400|ref|YP_976623.1| - 0.018 15.6 5.1 0.019 15.5 0.6 2.6 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent ADH_zinc_N PF00107.26 gi|121636400|ref|YP_976623.1| - 0.029 14.3 3.6 0.056 13.4 3.6 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase RmlD_sub_bind PF04321.17 gi|121636400|ref|YP_976623.1| - 0.035 13.2 1.0 0.074 12.1 1.0 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain LytR_C PF13399.6 gi|121636400|ref|YP_976623.1| - 0.053 14.5 8.8 0.055 14.5 5.2 2.7 2 2 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator ROK PF00480.20 gi|121636401|ref|YP_976624.1| - 6.8e-18 65.1 0.0 1.2e-17 64.3 0.0 1.4 1 1 0 1 1 1 1 ROK family YjgF_endoribonc PF14588.6 gi|121636401|ref|YP_976624.1| - 0.0017 18.6 0.1 0.0035 17.5 0.1 1.5 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease HTH_Crp_2 PF13545.6 gi|121636401|ref|YP_976624.1| - 0.085 12.8 0.1 0.28 11.2 0.1 1.9 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|121636401|ref|YP_976624.1| - 1.3 9.2 4.8 0.83 9.8 0.4 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain Glycos_transf_1 PF00534.20 gi|121636402|ref|YP_976625.1| - 1.1e-34 119.5 0.0 1.5e-34 119.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121636402|ref|YP_976625.1| - 4.7e-31 108.1 3.3 6.6e-31 107.6 2.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|121636402|ref|YP_976625.1| - 9.9e-28 97.6 10.2 9.9e-28 97.6 10.2 2.7 1 1 1 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|121636402|ref|YP_976625.1| - 3.5e-24 85.8 0.2 6.6e-24 84.9 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|121636402|ref|YP_976625.1| - 6.8e-06 26.4 0.0 1.4e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|121636402|ref|YP_976625.1| - 0.003 17.3 0.4 0.01 15.6 0.4 1.8 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|121636402|ref|YP_976625.1| - 0.14 12.2 0.1 0.7 9.9 0.1 2.0 1 1 0 1 1 1 0 Glycosyl transferase 4-like YbjN PF10722.9 gi|121636403|ref|YP_976626.1| - 1.5e-23 83.2 0.0 2e-23 82.8 0.0 1.2 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator LysE PF01810.18 gi|121636404|ref|YP_976627.1| - 8.2e-51 172.2 14.9 9.2e-51 172.1 14.9 1.0 1 0 0 1 1 1 1 LysE type translocator His_Phos_1 PF00300.22 gi|121636405|ref|YP_976628.1| - 2.7e-34 118.6 0.4 6.4e-28 97.8 0.2 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) HATPase_c PF02518.26 gi|121636406|ref|YP_976629.1| - 9.2e-25 87.3 0.0 1.9e-24 86.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121636406|ref|YP_976629.1| - 4.1e-14 52.4 0.4 1.1e-13 51.0 0.4 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|121636406|ref|YP_976629.1| - 0.00012 22.0 0.0 0.00028 20.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121636406|ref|YP_976629.1| - 0.0014 18.6 0.3 0.0099 15.8 0.3 2.3 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|121636406|ref|YP_976629.1| - 0.019 15.2 0.1 0.053 13.8 0.1 1.9 1 0 0 1 1 1 0 PAS fold HATPase_c_5 PF14501.6 gi|121636406|ref|YP_976629.1| - 0.054 13.4 0.0 0.12 12.3 0.0 1.6 1 1 0 1 1 1 0 GHKL domain Trans_reg_C PF00486.28 gi|121636407|ref|YP_976630.1| - 1.2e-28 99.0 0.1 6.7e-28 96.6 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 gi|121636407|ref|YP_976630.1| - 1.2e-27 96.3 0.0 1.7e-27 95.8 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain ALAD PF00490.21 gi|121636407|ref|YP_976630.1| - 0.14 11.3 0.1 4 6.5 0.0 2.1 2 0 0 2 2 2 0 Delta-aminolevulinic acid dehydratase GMC_oxred_N PF00732.19 gi|121636408|ref|YP_976631.1| - 2e-53 181.7 0.0 2.6e-53 181.3 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 gi|121636408|ref|YP_976631.1| - 3.9e-17 63.1 0.1 1.1e-16 61.7 0.0 1.8 2 0 0 2 2 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 gi|121636408|ref|YP_976631.1| - 2.9e-08 33.2 1.1 9.8e-05 21.6 0.6 2.6 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|121636408|ref|YP_976631.1| - 1.1e-06 28.5 9.7 3.6e-05 23.5 8.8 2.9 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121636408|ref|YP_976631.1| - 1.6e-06 27.6 0.3 0.00047 19.5 0.2 3.1 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|121636408|ref|YP_976631.1| - 7.4e-06 25.4 0.3 1.1e-05 24.8 0.3 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|121636408|ref|YP_976631.1| - 1.6e-05 25.1 3.3 0.00016 21.8 0.8 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|121636408|ref|YP_976631.1| - 0.0023 16.7 1.0 0.0058 15.4 0.8 1.6 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|121636408|ref|YP_976631.1| - 0.006 15.9 0.2 0.02 14.2 0.2 1.8 2 0 0 2 2 2 1 Thi4 family Gluconate_2-dh3 PF13618.6 gi|121636408|ref|YP_976631.1| - 0.0074 16.5 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 Amino_oxidase PF01593.24 gi|121636408|ref|YP_976631.1| - 0.0085 15.4 1.9 1.1 8.4 0.0 2.6 2 1 0 2 2 2 2 Flavin containing amine oxidoreductase ApbA PF02558.16 gi|121636408|ref|YP_976631.1| - 0.0087 15.7 0.4 0.053 13.2 0.1 2.1 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Lycopene_cycl PF05834.12 gi|121636408|ref|YP_976631.1| - 0.012 14.7 0.4 0.19 10.7 0.1 2.4 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|121636408|ref|YP_976631.1| - 0.082 13.5 0.7 0.18 12.4 0.7 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|121636408|ref|YP_976631.1| - 0.094 12.1 0.1 0.2 11.0 0.1 1.4 1 0 0 1 1 1 0 ThiF family Pyr_redox_3 PF13738.6 gi|121636408|ref|YP_976631.1| - 0.13 11.5 0.0 0.31 10.3 0.0 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121636408|ref|YP_976631.1| - 0.14 11.5 3.1 0.22 10.8 3.1 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase GntR PF00392.21 gi|121636411|ref|YP_976634.1| - 1.5e-18 66.2 0.5 3.3e-18 65.1 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 gi|121636411|ref|YP_976634.1| - 9.5e-14 51.9 7.2 1.9e-13 50.9 7.2 1.5 1 0 0 1 1 1 1 FCD domain HTH_Crp_2 PF13545.6 gi|121636411|ref|YP_976634.1| - 3.1e-07 30.3 0.0 5.8e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|121636411|ref|YP_976634.1| - 0.00017 21.4 1.2 0.00043 20.1 0.1 2.2 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 gi|121636411|ref|YP_976634.1| - 0.00022 21.5 0.0 0.00045 20.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|121636411|ref|YP_976634.1| - 0.00049 20.2 0.0 0.0011 19.1 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|121636411|ref|YP_976634.1| - 0.0015 18.4 0.1 0.0038 17.2 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|121636411|ref|YP_976634.1| - 0.0035 17.2 0.0 0.0062 16.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|121636411|ref|YP_976634.1| - 0.0096 15.8 0.0 0.027 14.3 0.0 1.6 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_24 PF13412.6 gi|121636411|ref|YP_976634.1| - 0.015 14.8 0.1 0.026 14.1 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|121636411|ref|YP_976634.1| - 0.02 14.8 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|121636411|ref|YP_976634.1| - 0.03 14.4 3.4 0.033 14.3 0.2 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|121636411|ref|YP_976634.1| - 0.037 13.9 0.0 0.081 12.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|121636411|ref|YP_976634.1| - 0.045 13.6 0.2 0.11 12.3 0.2 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain PaaX PF07848.12 gi|121636411|ref|YP_976634.1| - 0.11 12.7 0.3 0.28 11.4 0.3 1.6 1 0 0 1 1 1 0 PaaX-like protein Ppx-GppA PF02541.16 gi|121636413|ref|YP_976636.1| - 1.2e-93 313.7 0.0 1.4e-93 313.4 0.0 1.1 1 0 0 1 1 1 1 Ppx/GppA phosphatase family AA_permease_2 PF13520.6 gi|121636414|ref|YP_976637.1| - 0.064 12.1 5.6 0.085 11.7 5.6 1.0 1 0 0 1 1 1 0 Amino acid permease AP_endonuc_2 PF01261.24 gi|121636415|ref|YP_976638.1| - 4.7e-15 55.6 0.1 1.5e-14 53.9 0.1 1.8 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel 4HBT_3 PF13622.6 gi|121636416|ref|YP_976639.1| - 3.2e-37 129.1 4.2 3.7e-37 128.9 4.2 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 gi|121636416|ref|YP_976639.1| - 0.16 12.3 0.7 3 8.3 0.3 2.5 2 1 0 2 2 2 0 Thioesterase superfamily P5CR_dimer PF14748.6 gi|121636417|ref|YP_976640.1| - 4.6e-39 132.8 5.3 4.6e-39 132.8 5.3 2.3 2 1 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|121636417|ref|YP_976640.1| - 5.2e-25 87.9 1.6 1.4e-24 86.5 1.6 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|121636417|ref|YP_976640.1| - 5.6e-06 26.6 0.3 1.3e-05 25.4 0.3 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|121636417|ref|YP_976640.1| - 4.8e-05 23.4 1.1 7.2e-05 22.9 0.2 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 gi|121636417|ref|YP_976640.1| - 0.00077 20.3 0.6 0.0083 16.9 0.2 2.4 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold Sacchrp_dh_NADP PF03435.18 gi|121636417|ref|YP_976640.1| - 0.00099 19.4 0.3 0.0021 18.3 0.3 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 gi|121636417|ref|YP_976640.1| - 0.001 19.4 0.5 0.001 19.4 0.5 1.8 2 0 0 2 2 2 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|121636417|ref|YP_976640.1| - 0.0014 18.8 0.2 0.0041 17.4 0.2 1.9 1 1 0 1 1 1 1 TrkA-N domain Rossmann-like PF10727.9 gi|121636417|ref|YP_976640.1| - 0.0054 16.6 3.0 0.0054 16.6 3.0 2.6 3 0 0 3 3 3 1 Rossmann-like domain ApbA PF02558.16 gi|121636417|ref|YP_976640.1| - 0.0075 15.9 3.0 0.03 14.0 3.0 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA IlvN PF07991.12 gi|121636417|ref|YP_976640.1| - 0.0087 15.6 0.2 0.015 14.9 0.2 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 gi|121636417|ref|YP_976640.1| - 0.12 12.4 2.8 1.9 8.4 2.8 2.3 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PrpR_N PF06506.11 gi|121636417|ref|YP_976640.1| - 0.34 10.5 4.3 1.4 8.5 0.1 3.1 4 0 0 4 4 4 0 Propionate catabolism activator HTH_17 PF12728.7 gi|121636418|ref|YP_976641.1| - 4.4e-14 52.4 0.0 5.1e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121636418|ref|YP_976641.1| - 0.00031 20.5 0.0 0.00061 19.5 0.0 1.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 gi|121636418|ref|YP_976641.1| - 0.0013 18.1 0.4 0.008 15.6 0.1 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|121636418|ref|YP_976641.1| - 0.015 15.3 0.0 0.023 14.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix AbiEi_4 PF13338.6 gi|121636418|ref|YP_976641.1| - 0.018 15.2 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_22 PF13309.6 gi|121636418|ref|YP_976641.1| - 0.026 14.6 0.2 0.044 13.9 0.2 1.3 1 0 0 1 1 1 0 HTH domain HTH_38 PF13936.6 gi|121636418|ref|YP_976641.1| - 0.037 13.8 0.0 0.064 13.0 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|121636418|ref|YP_976641.1| - 0.047 13.2 0.0 0.07 12.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 LacI PF00356.21 gi|121636418|ref|YP_976641.1| - 0.055 13.3 0.2 0.07 12.9 0.2 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_IclR PF09339.10 gi|121636418|ref|YP_976641.1| - 0.08 12.8 0.1 0.16 11.8 0.0 1.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_7 PF02796.15 gi|121636418|ref|YP_976641.1| - 0.085 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_DeoR PF08220.12 gi|121636418|ref|YP_976641.1| - 0.094 12.5 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|121636418|ref|YP_976641.1| - 0.16 12.2 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_Cox PF10743.9 gi|121636418|ref|YP_976641.1| - 0.17 12.0 0.0 0.24 11.5 0.0 1.3 1 1 0 1 1 1 0 Regulatory phage protein cox Epimerase PF01370.21 gi|121636419|ref|YP_976642.1| - 1.4e-19 70.5 0.0 1.8e-19 70.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|121636419|ref|YP_976642.1| - 2.4e-14 53.5 0.0 4.1e-13 49.4 0.0 2.1 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121636419|ref|YP_976642.1| - 8.6e-10 38.1 0.0 1.1e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|121636419|ref|YP_976642.1| - 0.0003 20.0 0.0 0.00049 19.3 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|121636419|ref|YP_976642.1| - 0.0072 15.5 0.1 0.1 11.7 0.0 2.1 1 1 1 2 2 2 1 Male sterility protein UPF0227 PF05728.12 gi|121636419|ref|YP_976642.1| - 0.0076 16.2 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Acyltransferase PF01553.21 gi|121636420|ref|YP_976643.1| - 7.2e-19 67.7 0.0 1.1e-18 67.1 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase DAGAT PF03982.13 gi|121636420|ref|YP_976643.1| - 0.0088 15.0 0.0 0.013 14.5 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol acyltransferase CMAS PF02353.20 gi|121636421|ref|YP_976644.1| - 2.1e-120 401.1 0.0 2.4e-120 400.9 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636421|ref|YP_976644.1| - 4.4e-08 33.1 0.0 6.6e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636421|ref|YP_976644.1| - 5.1e-06 27.1 0.0 9.4e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636421|ref|YP_976644.1| - 5.2e-06 27.1 0.0 9.7e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636421|ref|YP_976644.1| - 7e-05 23.4 0.0 0.00014 22.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636421|ref|YP_976644.1| - 0.088 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|121636421|ref|YP_976644.1| - 0.15 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|121636421|ref|YP_976644.1| - 0.15 11.1 0.0 0.27 10.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.11 gi|121636421|ref|YP_976644.1| - 0.17 10.8 0.0 0.24 10.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) MaoC_dehydrat_N PF13452.6 gi|121636422|ref|YP_976645.1| - 1.6e-28 99.4 0.0 1.9e-28 99.2 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase MaoC_dehydratas PF01575.19 gi|121636422|ref|YP_976645.1| - 3.7e-06 26.5 0.0 4.8e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain HAD PF12710.7 gi|121636423|ref|YP_976646.1| - 2e-27 96.8 0.3 3.3e-27 96.1 0.3 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121636423|ref|YP_976646.1| - 4.9e-10 40.0 0.2 1.6e-09 38.4 0.2 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121636423|ref|YP_976646.1| - 1.3e-06 28.3 0.0 5.4e-06 26.3 0.0 1.9 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF3918 PF13056.6 gi|121636423|ref|YP_976646.1| - 0.44 10.2 2.0 13 5.5 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) Mycobact_memb PF05423.13 gi|121636424|ref|YP_976647.1| - 3.8e-64 214.8 0.2 4.3e-64 214.6 0.2 1.0 1 0 0 1 1 1 1 Mycobacterium membrane protein DUF2953 PF11167.8 gi|121636424|ref|YP_976647.1| - 0.081 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) MMPL PF03176.15 gi|121636425|ref|YP_976648.1| - 1.3e-215 714.6 22.4 9.4e-111 369.9 7.7 2.3 2 0 0 2 2 2 2 MMPL family DUF836 PF05768.14 gi|121636426|ref|YP_976649.1| - 1.1e-16 61.0 0.0 1.2e-16 60.9 0.0 1.0 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) TraF PF13728.6 gi|121636426|ref|YP_976649.1| - 0.0046 16.8 0.0 0.0057 16.5 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 gi|121636426|ref|YP_976649.1| - 0.015 15.5 0.0 0.051 13.8 0.0 1.8 1 1 1 2 2 2 0 Glutaredoxin GlutR_N PF05201.15 gi|121636427|ref|YP_976650.1| - 3e-44 150.3 2.1 5.9e-44 149.4 0.5 2.2 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|121636427|ref|YP_976650.1| - 2.7e-30 105.3 0.4 6.4e-30 104.0 0.0 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|121636427|ref|YP_976650.1| - 5e-22 78.2 0.5 1.2e-21 77.0 0.2 1.8 2 0 0 2 2 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Glu_dehyd_C PF16912.5 gi|121636427|ref|YP_976650.1| - 1.7e-05 24.4 1.3 6.7e-05 22.5 0.5 2.2 2 0 0 2 2 2 1 Glucose dehydrogenase C-terminus Sacchrp_dh_NADP PF03435.18 gi|121636427|ref|YP_976650.1| - 5.7e-05 23.4 0.6 0.00018 21.7 0.6 1.9 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_2 PF03446.15 gi|121636427|ref|YP_976650.1| - 0.0015 18.7 3.1 0.0026 17.9 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ThiF PF00899.21 gi|121636427|ref|YP_976650.1| - 0.0033 16.8 3.0 0.0047 16.3 1.8 1.8 2 0 0 2 2 2 1 ThiF family F420_oxidored PF03807.17 gi|121636427|ref|YP_976650.1| - 0.0038 17.8 1.1 0.014 16.0 0.2 2.3 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|121636427|ref|YP_976650.1| - 0.0038 16.9 0.3 0.0096 15.6 0.3 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|121636427|ref|YP_976650.1| - 0.1 13.1 0.4 0.29 11.6 0.4 1.8 1 0 0 1 1 1 0 Putative NAD(P)-binding NAD_binding_8 PF13450.6 gi|121636427|ref|YP_976650.1| - 0.1 12.8 0.4 0.37 11.1 0.4 2.0 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NAD_binding_10 PF13460.6 gi|121636427|ref|YP_976650.1| - 0.17 11.7 13.8 0.012 15.5 6.2 2.7 1 1 1 2 2 2 0 NAD(P)H-binding TfuA PF07812.12 gi|121636427|ref|YP_976650.1| - 0.49 10.1 3.5 0.82 9.4 2.4 2.1 1 1 0 1 1 1 0 TfuA-like protein Porphobil_deam PF01379.20 gi|121636428|ref|YP_976651.1| - 1.9e-66 223.5 0.0 2.5e-66 223.1 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|121636428|ref|YP_976651.1| - 4.3e-22 78.3 1.0 1e-21 77.1 1.0 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain FrhB_FdhB_N PF04422.13 gi|121636428|ref|YP_976651.1| - 0.032 14.4 0.0 0.072 13.2 0.0 1.6 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term HEM4 PF02602.15 gi|121636429|ref|YP_976652.1| - 9.9e-63 211.6 0.0 2.7e-62 210.1 0.0 1.7 2 0 0 2 2 2 1 Uroporphyrinogen-III synthase HemD TP_methylase PF00590.20 gi|121636429|ref|YP_976652.1| - 1.2e-40 139.7 4.8 2e-40 139.0 4.8 1.4 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases ALAD PF00490.21 gi|121636430|ref|YP_976653.1| - 1.3e-130 435.2 0.0 1.5e-130 435.1 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase OMPdecase PF00215.24 gi|121636430|ref|YP_976653.1| - 0.044 13.4 1.5 0.15 11.6 0.3 2.0 2 0 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DUF3093 PF11292.8 gi|121636431|ref|YP_976654.1| - 0.0089 16.3 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3093) Phage_holin_3_6 PF07332.11 gi|121636432|ref|YP_976655.1| - 0.68 10.0 5.6 1.1 9.3 5.6 1.4 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF222 PF02720.17 gi|121636433|ref|YP_976656.1| - 1e-92 310.9 21.6 1e-92 310.9 21.6 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF222) HNH_5 PF14279.6 gi|121636433|ref|YP_976656.1| - 0.0034 17.2 0.9 0.0067 16.3 0.9 1.5 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 gi|121636433|ref|YP_976656.1| - 0.024 14.8 3.0 0.045 13.9 3.0 1.5 1 0 0 1 1 1 0 HNH endonuclease Invasin_D3 PF09134.10 gi|121636433|ref|YP_976656.1| - 0.16 12.3 0.0 0.32 11.3 0.0 1.4 1 0 0 1 1 1 0 Invasin, domain 3 STAS PF01740.21 gi|121636434|ref|YP_976657.1| - 2.5e-12 46.5 0.0 3.1e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121636434|ref|YP_976657.1| - 4.4e-08 33.3 0.9 7.5e-08 32.6 0.1 1.7 2 0 0 2 2 2 1 STAS domain Acyl_transf_3 PF01757.22 gi|121636435|ref|YP_976658.1| - 4.3e-22 78.6 36.6 5.3e-22 78.3 36.6 1.1 1 0 0 1 1 1 1 Acyltransferase family TetR_C_16 PF17920.1 gi|121636435|ref|YP_976658.1| - 0.15 12.3 2.0 0.19 12.0 0.4 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Lipase_GDSL_2 PF13472.6 gi|121636436|ref|YP_976659.1| - 1.5e-18 67.9 1.4 1.8e-18 67.6 1.4 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 gi|121636436|ref|YP_976659.1| - 7.3e-07 29.4 0.0 1.6e-06 28.3 0.0 1.5 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Esterase PF00756.20 gi|121636437|ref|YP_976660.1| - 1.8e-08 34.3 0.2 1.7e-07 31.1 0.2 2.1 1 1 0 1 1 1 1 Putative esterase Asp2 PF16929.5 gi|121636437|ref|YP_976660.1| - 0.033 13.2 0.3 0.045 12.7 0.3 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter TAT_signal PF10518.9 gi|121636437|ref|YP_976660.1| - 0.14 12.1 6.2 0.44 10.5 6.2 1.9 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Methyltransf_11 PF08241.12 gi|121636438|ref|YP_976661.1| - 2.6e-15 56.8 0.0 3.1e-15 56.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636438|ref|YP_976661.1| - 5.1e-13 49.5 0.0 6.2e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636438|ref|YP_976661.1| - 3.6e-10 39.8 0.0 4e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121636438|ref|YP_976661.1| - 1.3e-08 34.4 0.0 1.6e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|121636438|ref|YP_976661.1| - 4.5e-07 30.5 0.0 6.3e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636438|ref|YP_976661.1| - 2.2e-06 27.6 0.0 2.3e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|121636438|ref|YP_976661.1| - 0.00084 20.3 0.0 0.001 20.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_PK PF05891.12 gi|121636438|ref|YP_976661.1| - 0.083 12.4 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_8 PF05148.15 gi|121636438|ref|YP_976661.1| - 0.21 11.4 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Hypothetical methyltransferase AA_permease PF00324.21 gi|121636440|ref|YP_976663.1| - 3.8e-105 352.2 50.9 4.7e-105 351.9 50.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|121636440|ref|YP_976663.1| - 1.5e-32 113.0 53.8 1.9e-32 112.7 53.8 1.1 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|121636440|ref|YP_976663.1| - 8.8e-06 24.8 13.8 8.8e-06 24.8 13.8 2.3 2 1 0 2 2 2 1 Spore germination protein F420H2_quin_red PF04075.14 gi|121636441|ref|YP_976664.1| - 0.0024 18.0 0.1 0.0028 17.8 0.1 1.2 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase Aminotran_3 PF00202.21 gi|121636442|ref|YP_976665.1| - 1.1e-88 297.6 0.0 3.5e-88 296.0 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class-III His_Phos_1 PF00300.22 gi|121636443|ref|YP_976666.1| - 4.7e-38 130.8 0.2 5.4e-38 130.6 0.2 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Titin_Z PF09042.11 gi|121636443|ref|YP_976666.1| - 2.8 8.0 6.6 16 5.6 0.8 2.5 2 0 0 2 2 2 0 Titin Z AhpC-TSA PF00578.21 gi|121636444|ref|YP_976667.1| - 6e-16 58.5 0.0 7.9e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121636444|ref|YP_976667.1| - 1.1e-15 57.6 0.0 1.5e-15 57.2 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|121636444|ref|YP_976667.1| - 2.8e-07 30.7 0.0 3.8e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|121636444|ref|YP_976667.1| - 2.4e-05 24.2 0.0 4.1e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin LPAM_1 PF08139.12 gi|121636444|ref|YP_976667.1| - 0.0043 17.5 2.0 0.01 16.3 2.0 1.7 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site DsbD PF02683.15 gi|121636445|ref|YP_976668.1| - 6.4e-40 137.3 17.5 8.1e-40 137.0 17.5 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Colicin PF01024.19 gi|121636445|ref|YP_976668.1| - 9.7 6.0 7.0 2.9 7.7 0.1 2.4 2 1 0 2 2 2 0 Colicin pore forming domain ResB PF05140.14 gi|121636446|ref|YP_976669.1| - 1.8e-137 459.1 0.0 3.2e-137 458.3 0.0 1.4 1 1 0 1 1 1 1 ResB-like family RseC_MucC PF04246.12 gi|121636446|ref|YP_976669.1| - 0.018 15.0 1.4 0.051 13.5 0.0 2.4 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Big_4 PF07532.11 gi|121636446|ref|YP_976669.1| - 0.12 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 4) Cytochrom_C_asm PF01578.20 gi|121636447|ref|YP_976670.1| - 6.1e-45 153.6 9.9 6.1e-45 153.6 9.9 1.6 2 0 0 2 2 2 1 Cytochrome C assembly protein CbiA PF01656.23 gi|121636448|ref|YP_976671.1| - 7.7e-12 45.4 0.0 3.7e-11 43.2 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|121636448|ref|YP_976671.1| - 2.2e-08 34.2 0.0 4.9e-08 33.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|121636448|ref|YP_976671.1| - 9.1e-06 25.3 0.0 2.9e-05 23.7 0.0 1.7 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ParA PF10609.9 gi|121636448|ref|YP_976671.1| - 0.00014 21.4 0.1 0.00023 20.7 0.1 1.3 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|121636448|ref|YP_976671.1| - 0.0039 16.4 0.1 0.0056 15.9 0.1 1.2 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_16 PF13191.6 gi|121636448|ref|YP_976671.1| - 0.091 13.1 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain YrbL-PhoP_reg PF10707.9 gi|121636448|ref|YP_976671.1| - 0.12 11.9 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL DUF4229 PF14012.6 gi|121636449|ref|YP_976672.1| - 1.7e-20 72.9 11.1 2.2e-20 72.5 11.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4229) DUF3007 PF11460.8 gi|121636449|ref|YP_976672.1| - 0.031 14.5 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) CPBP PF02517.16 gi|121636449|ref|YP_976672.1| - 0.29 11.5 2.1 0.35 11.3 2.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease PE PF00934.20 gi|121636450|ref|YP_976673.1| - 4.6e-33 113.4 24.2 6.8e-33 112.9 24.2 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636450|ref|YP_976673.1| - 3.3 8.2 13.6 5.7 7.5 13.6 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm ACP_syn_III_C PF08541.10 gi|121636451|ref|YP_976674.1| - 8.6e-32 109.2 0.6 6.5e-31 106.4 0.1 2.6 3 0 0 3 3 3 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|121636451|ref|YP_976674.1| - 9e-23 79.9 1.0 2.3e-22 78.7 1.0 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 gi|121636451|ref|YP_976674.1| - 3.5e-06 26.6 0.3 3.5e-06 26.6 0.3 2.3 2 1 1 3 3 3 1 Thiolase, N-terminal domain FAE1_CUT1_RppA PF08392.12 gi|121636451|ref|YP_976674.1| - 1.9e-05 24.1 0.0 9.4e-05 21.8 0.0 1.9 2 0 0 2 2 2 1 FAE1/Type III polyketide synthase-like protein Chal_sti_synt_N PF00195.19 gi|121636451|ref|YP_976674.1| - 0.00042 19.8 1.5 0.00087 18.8 1.5 1.5 1 1 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain ketoacyl-synt PF00109.26 gi|121636451|ref|YP_976674.1| - 0.78 9.3 9.0 27 4.2 5.8 3.0 1 1 1 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain UbiA PF01040.18 gi|121636452|ref|YP_976675.1| - 2.8e-29 102.2 29.8 2.8e-29 102.2 29.8 1.5 1 1 0 1 1 1 1 UbiA prenyltransferase family YtxH PF12732.7 gi|121636452|ref|YP_976675.1| - 1.1 9.9 2.9 2.8 8.5 2.9 1.8 1 0 0 1 1 1 0 YtxH-like protein PNP_UDP_1 PF01048.20 gi|121636453|ref|YP_976676.1| - 3e-36 124.9 1.2 4.1e-36 124.4 1.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Epimerase PF01370.21 gi|121636454|ref|YP_976677.1| - 3.9e-41 141.1 0.2 5.2e-40 137.4 0.2 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|121636454|ref|YP_976677.1| - 4.1e-27 95.5 0.0 4.8e-17 62.4 0.0 2.5 2 1 0 2 2 2 2 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121636454|ref|YP_976677.1| - 9.5e-09 34.6 0.0 8.2e-05 21.7 0.0 2.3 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|121636454|ref|YP_976677.1| - 1.1e-06 28.0 0.1 0.0064 15.6 0.1 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|121636454|ref|YP_976677.1| - 2e-06 27.8 1.9 5.6e-06 26.4 1.9 1.8 1 1 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 gi|121636454|ref|YP_976677.1| - 0.00012 21.3 0.0 0.17 10.9 0.0 2.9 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|121636454|ref|YP_976677.1| - 0.0004 19.6 0.0 0.013 14.7 0.0 2.5 2 1 0 2 2 2 1 Male sterility protein TFIIA PF03153.13 gi|121636456|ref|YP_976679.1| - 0.73 9.8 12.7 1.2 9.0 12.7 1.5 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Glycos_transf_2 PF00535.26 gi|121636457|ref|YP_976680.1| - 3.5e-20 72.5 0.0 4.7e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|121636457|ref|YP_976680.1| - 0.03 14.8 0.0 0.056 14.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|121636457|ref|YP_976680.1| - 0.044 13.7 0.0 0.079 12.9 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|121636457|ref|YP_976680.1| - 0.1 12.1 0.0 0.19 11.2 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 21 DUF2064 PF09837.9 gi|121636458|ref|YP_976681.1| - 6.6e-29 100.2 0.6 1.2e-28 99.4 0.6 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) AMP-binding PF00501.28 gi|121636460|ref|YP_976683.1| - 2.8e-28 98.7 0.2 8.5e-28 97.1 0.2 1.7 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636460|ref|YP_976683.1| - 1.3e-16 61.3 0.5 3.3e-16 60.0 0.5 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF3349 PF11829.8 gi|121636461|ref|YP_976684.1| - 1.4e-33 115.5 0.0 1.6e-33 115.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3349) FliG_N PF14842.6 gi|121636461|ref|YP_976684.1| - 0.073 13.6 0.0 0.097 13.2 0.0 1.2 1 0 0 1 1 1 0 FliG N-terminal domain DUF3357 PF11837.8 gi|121636462|ref|YP_976685.1| - 0.082 13.4 0.7 0.1 13.0 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) DUF2207 PF09972.9 gi|121636462|ref|YP_976685.1| - 0.49 9.1 3.8 0.56 8.9 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CbtB PF09489.10 gi|121636462|ref|YP_976685.1| - 5.9 7.1 7.1 1.4 9.1 0.7 2.2 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtB) PHO4 PF01384.20 gi|121636463|ref|YP_976686.1| - 9.8e-78 261.5 39.6 4.1e-77 259.5 39.6 1.8 1 1 0 1 1 1 1 Phosphate transporter family Glyoxalase PF00903.25 gi|121636464|ref|YP_976687.1| - 3e-15 56.6 0.0 3.6e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|121636464|ref|YP_976687.1| - 1.3e-06 28.3 0.0 3.2e-06 27.1 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|121636464|ref|YP_976687.1| - 0.0008 20.2 0.1 0.0016 19.2 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain adh_short PF00106.25 gi|121636465|ref|YP_976688.1| - 2.1e-38 131.7 0.0 2.8e-38 131.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636465|ref|YP_976688.1| - 5.8e-29 101.3 0.2 7.2e-29 101.0 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636465|ref|YP_976688.1| - 0.00026 21.0 0.3 0.00058 19.8 0.3 1.5 1 0 0 1 1 1 1 KR domain ECH_1 PF00378.20 gi|121636466|ref|YP_976689.1| - 9.5e-49 166.0 0.0 1.7e-48 165.1 0.0 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636466|ref|YP_976689.1| - 2.5e-14 53.5 0.0 3.1e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase KdpC PF02669.15 gi|121636466|ref|YP_976689.1| - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 K+-transporting ATPase, c chain PIN PF01850.21 gi|121636467|ref|YP_976690.1| - 0.00032 21.2 0.0 0.00036 21.0 0.0 1.1 1 0 0 1 1 1 1 PIN domain CcdA PF07362.12 gi|121636468|ref|YP_976691.1| - 3.9e-06 27.2 0.2 5.4e-06 26.7 0.2 1.1 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA RHH_1 PF01402.21 gi|121636468|ref|YP_976691.1| - 0.031 14.2 0.5 0.13 12.2 0.5 2.0 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family Rimk_N PF18030.1 gi|121636468|ref|YP_976691.1| - 0.08 13.3 0.0 0.094 13.1 0.0 1.2 1 0 0 1 1 1 0 RimK PreATP-grasp domain AMP-binding PF00501.28 gi|121636469|ref|YP_976692.1| - 9.8e-81 271.5 0.0 1.4e-80 271.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636469|ref|YP_976692.1| - 4.6e-20 72.4 5.0 1.1e-19 71.1 5.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.6 gi|121636469|ref|YP_976692.1| - 0.01 16.1 0.0 0.019 15.3 0.0 1.4 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain Amidohydro_3 PF07969.11 gi|121636470|ref|YP_976693.1| - 3.2e-79 267.6 3.3 3.8e-79 267.3 3.3 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|121636470|ref|YP_976693.1| - 3.4e-10 39.8 0.0 3.7e-09 36.3 0.0 2.4 2 1 0 2 2 2 1 Amidohydrolase family MR_MLE_C PF13378.6 gi|121636471|ref|YP_976694.1| - 1e-30 107.0 6.0 1.6e-30 106.3 6.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like Enolase_like_N PF18374.1 gi|121636471|ref|YP_976694.1| - 3.9e-27 93.4 1.3 7.1e-27 92.5 1.3 1.5 1 0 0 1 1 1 1 Enolase N-terminal domain-like MAAL_C PF07476.11 gi|121636471|ref|YP_976694.1| - 0.013 14.6 0.1 0.024 13.8 0.1 1.3 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Abhydrolase_6 PF12697.7 gi|121636472|ref|YP_976695.1| - 3.4e-23 83.4 2.8 4e-23 83.2 2.8 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121636472|ref|YP_976695.1| - 1.1e-22 81.0 0.0 1.3e-20 74.1 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121636472|ref|YP_976695.1| - 1.3e-12 47.5 0.0 6.4e-12 45.2 0.0 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|121636472|ref|YP_976695.1| - 1e-07 32.0 0.0 1.8e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Patatin PF01734.22 gi|121636472|ref|YP_976695.1| - 0.01 16.0 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 0 Patatin-like phospholipase Thioesterase PF00975.20 gi|121636472|ref|YP_976695.1| - 0.095 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain TPP_enzyme_N PF02776.18 gi|121636473|ref|YP_976696.1| - 2.4e-28 98.9 0.8 5.3e-28 97.8 0.8 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF3592 PF12158.8 gi|121636474|ref|YP_976697.1| - 0.00021 21.4 1.0 0.00054 20.0 1.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3592) Glyco_transf_4 PF13439.6 gi|121636475|ref|YP_976698.1| - 3.8e-27 95.3 4.5 3.8e-27 95.3 4.5 1.9 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|121636475|ref|YP_976698.1| - 5.8e-22 78.0 0.0 1.1e-21 77.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|121636475|ref|YP_976698.1| - 2.7e-21 76.7 12.7 2.7e-21 76.7 12.7 3.0 1 1 1 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|121636475|ref|YP_976698.1| - 1.1e-19 71.2 0.1 3.1e-19 69.7 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|121636475|ref|YP_976698.1| - 4.2e-07 30.1 0.0 8.8e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|121636475|ref|YP_976698.1| - 0.00039 20.7 0.0 0.0011 19.3 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ubie_methyltran PF01209.18 gi|121636476|ref|YP_976699.1| - 9.7e-59 198.5 0.0 1.3e-58 198.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|121636476|ref|YP_976699.1| - 2.9e-17 63.1 0.1 5.5e-17 62.2 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636476|ref|YP_976699.1| - 4.6e-14 52.9 0.1 9.5e-14 51.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636476|ref|YP_976699.1| - 1.7e-08 34.5 0.0 2.3e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636476|ref|YP_976699.1| - 2.4e-08 33.9 0.0 4.6e-08 33.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636476|ref|YP_976699.1| - 2.9e-05 24.7 0.0 5.1e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|121636476|ref|YP_976699.1| - 0.0059 16.5 0.0 0.0078 16.1 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase MetW PF07021.12 gi|121636476|ref|YP_976699.1| - 0.013 15.1 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW PI-PLC-Y PF00387.19 gi|121636476|ref|YP_976699.1| - 0.14 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, Y domain DUF732 PF05305.14 gi|121636477|ref|YP_976700.1| - 1.4e-23 83.1 0.1 1.7e-23 82.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF732) Methyltransf_31 PF13847.6 gi|121636478|ref|YP_976701.1| - 1.3e-18 67.2 0.0 1.7e-18 66.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636478|ref|YP_976701.1| - 1.7e-18 67.1 0.0 3.8e-18 66.0 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636478|ref|YP_976701.1| - 8.9e-16 58.3 0.0 2e-15 57.2 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636478|ref|YP_976701.1| - 2.3e-14 53.6 0.0 3.2e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|121636478|ref|YP_976701.1| - 3.5e-13 49.7 0.0 6.6e-13 48.8 0.0 1.4 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_12 PF08242.12 gi|121636478|ref|YP_976701.1| - 1.9e-11 44.5 0.0 3.1e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121636478|ref|YP_976701.1| - 9e-08 31.8 0.0 1.3e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|121636478|ref|YP_976701.1| - 4.9e-06 26.1 0.0 6.3e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 gi|121636478|ref|YP_976701.1| - 1.5e-05 24.5 0.0 2.1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 gi|121636478|ref|YP_976701.1| - 3.4e-05 23.3 0.0 4.2e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|121636478|ref|YP_976701.1| - 0.00018 21.2 0.0 0.00025 20.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.6 gi|121636478|ref|YP_976701.1| - 0.0023 17.9 0.0 0.0036 17.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|121636478|ref|YP_976701.1| - 0.0039 16.6 0.0 0.0049 16.3 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_18 PF12847.7 gi|121636478|ref|YP_976701.1| - 0.02 14.8 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|121636478|ref|YP_976701.1| - 0.027 14.1 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW tRNA_U5-meth_tr PF05958.11 gi|121636478|ref|YP_976701.1| - 0.038 13.0 0.0 0.048 12.7 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_8 PF05148.15 gi|121636478|ref|YP_976701.1| - 0.24 11.2 0.0 0.34 10.7 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase FAD_binding_3 PF01494.19 gi|121636479|ref|YP_976702.1| - 3.3e-17 62.8 0.2 1.8e-16 60.3 0.2 1.9 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121636479|ref|YP_976702.1| - 2.5e-10 40.1 0.5 1.6e-09 37.4 0.5 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|121636479|ref|YP_976702.1| - 7.8e-10 38.2 0.2 0.00063 18.7 0.0 2.4 2 1 0 2 2 2 2 Tryptophan halogenase DAO PF01266.24 gi|121636479|ref|YP_976702.1| - 1.5e-09 37.9 1.8 0.00032 20.4 0.2 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|121636479|ref|YP_976702.1| - 2.2e-09 36.9 0.2 1.2e-08 34.4 0.1 2.1 2 1 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.14 gi|121636479|ref|YP_976702.1| - 3.4e-07 29.3 0.4 2.4e-05 23.2 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.7 gi|121636479|ref|YP_976702.1| - 1.8e-06 27.6 5.0 3.1e-06 26.8 5.0 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121636479|ref|YP_976702.1| - 6.1e-06 26.4 0.1 2.1e-05 24.7 0.1 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|121636479|ref|YP_976702.1| - 1.2e-05 24.6 1.1 2.1e-05 23.8 1.1 1.4 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|121636479|ref|YP_976702.1| - 1.7e-05 24.1 0.2 4.4e-05 22.7 0.4 1.5 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|121636479|ref|YP_976702.1| - 0.00029 21.3 0.1 0.23 12.0 0.0 2.7 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|121636479|ref|YP_976702.1| - 0.00037 19.9 1.0 0.00064 19.1 1.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|121636479|ref|YP_976702.1| - 0.0085 15.4 0.1 0.019 14.2 0.1 1.5 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|121636479|ref|YP_976702.1| - 0.0097 15.2 0.1 0.017 14.4 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|121636479|ref|YP_976702.1| - 0.046 13.6 0.1 0.069 13.0 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain polyprenyl_synt PF00348.17 gi|121636480|ref|YP_976703.1| - 6.1e-63 212.3 0.0 7.5e-63 212.0 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase MitMem_reg PF13012.6 gi|121636480|ref|YP_976703.1| - 0.045 14.2 0.0 1.2 9.6 0.0 2.3 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Peptidase_M48 PF01435.18 gi|121636481|ref|YP_976704.1| - 8.5e-37 126.8 0.3 1.3e-36 126.2 0.0 1.4 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|121636481|ref|YP_976704.1| - 0.0084 15.3 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 NAD_Gly3P_dh_C PF07479.14 gi|121636482|ref|YP_976705.1| - 3.8e-48 163.4 1.8 7.4e-48 162.4 1.1 1.8 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 gi|121636482|ref|YP_976705.1| - 6.3e-48 162.7 0.0 1e-47 162.0 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|121636482|ref|YP_976705.1| - 3.4e-05 24.3 0.0 0.00019 21.9 0.0 2.3 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.17 gi|121636482|ref|YP_976705.1| - 0.00067 18.7 0.0 0.0014 17.6 0.0 1.5 2 0 0 2 2 2 1 Prephenate dehydrogenase NAD_binding_7 PF13241.6 gi|121636482|ref|YP_976705.1| - 0.019 15.4 0.0 6.9 7.2 0.0 3.0 2 1 0 2 2 2 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|121636482|ref|YP_976705.1| - 0.053 13.8 0.0 0.19 12.0 0.0 2.0 2 0 0 2 2 2 0 TrkA-N domain FMO-like PF00743.19 gi|121636483|ref|YP_976706.1| - 3.7e-17 61.9 0.0 5.3e-16 58.1 0.0 2.3 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 gi|121636483|ref|YP_976706.1| - 6.9e-12 45.2 0.0 9.3e-07 28.4 0.0 2.7 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121636483|ref|YP_976706.1| - 3.6e-11 42.9 0.0 8.9e-11 41.6 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121636483|ref|YP_976706.1| - 3.5e-10 40.0 0.0 3.3e-08 33.6 0.0 2.9 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121636483|ref|YP_976706.1| - 2e-09 37.5 0.1 4.5e-06 26.5 0.0 3.3 2 1 0 3 3 3 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121636483|ref|YP_976706.1| - 1.9e-08 33.8 0.0 2.2e-07 30.4 0.0 2.1 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 gi|121636483|ref|YP_976706.1| - 2.9e-08 33.2 0.2 4.5e-05 22.8 0.0 3.0 4 0 0 4 4 4 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 gi|121636483|ref|YP_976706.1| - 4.3e-06 27.2 0.1 0.01 16.4 0.0 2.8 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|121636483|ref|YP_976706.1| - 3.8e-05 23.7 0.7 0.011 15.7 0.0 3.5 2 1 0 2 2 2 1 FAD-NAD(P)-binding Mqo PF06039.15 gi|121636483|ref|YP_976706.1| - 0.0022 16.6 0.0 1.6 7.2 0.0 2.3 2 0 0 2 2 2 2 Malate:quinone oxidoreductase (Mqo) FAD_binding_2 PF00890.24 gi|121636483|ref|YP_976706.1| - 0.0057 15.8 0.1 0.02 14.0 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|121636483|ref|YP_976706.1| - 0.0092 15.1 0.2 0.14 11.1 0.0 2.6 3 0 0 3 3 3 1 Lycopene cyclase protein Shikimate_DH PF01488.20 gi|121636483|ref|YP_976706.1| - 0.024 14.7 0.0 0.35 10.9 0.0 2.5 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase Amino_oxidase PF01593.24 gi|121636483|ref|YP_976706.1| - 0.048 12.9 0.0 0.1 11.8 0.0 1.5 1 1 0 1 1 1 0 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.6 gi|121636483|ref|YP_976706.1| - 0.096 13.1 0.1 0.27 11.7 0.0 1.9 2 1 0 2 2 2 0 Putative NAD(P)-binding FAD_oxidored PF12831.7 gi|121636483|ref|YP_976706.1| - 0.1 11.9 0.1 0.22 10.8 0.1 1.6 1 0 0 1 1 1 0 FAD dependent oxidoreductase GIDA PF01134.22 gi|121636483|ref|YP_976706.1| - 0.21 10.6 0.3 2 7.4 0.0 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A HI0933_like PF03486.14 gi|121636483|ref|YP_976706.1| - 0.26 9.9 0.1 1.3 7.7 0.1 2.0 2 0 0 2 2 2 0 HI0933-like protein DUF520 PF04461.13 gi|121636484|ref|YP_976707.1| - 2.8e-62 209.6 6.4 3.1e-62 209.4 6.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF520) Microtub_bd PF16796.5 gi|121636484|ref|YP_976707.1| - 0.037 14.0 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Microtubule binding Methyltransf_2 PF00891.18 gi|121636485|ref|YP_976708.1| - 3.6e-40 137.5 0.0 6e-40 136.8 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|121636485|ref|YP_976708.1| - 3e-13 49.5 0.0 9.5e-13 47.9 0.0 1.9 2 0 0 2 2 2 1 Dimerisation domain MTS PF05175.14 gi|121636485|ref|YP_976708.1| - 2.6e-07 30.4 0.0 4.3e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|121636485|ref|YP_976708.1| - 1.8e-06 28.6 0.1 3.9e-06 27.5 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636485|ref|YP_976708.1| - 3.1e-06 27.9 0.0 5.7e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636485|ref|YP_976708.1| - 4.7e-06 27.2 0.1 8.5e-06 26.3 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636485|ref|YP_976708.1| - 0.00014 21.7 0.0 0.0002 21.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636485|ref|YP_976708.1| - 0.00014 21.7 0.0 0.00023 21.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain HTH_20 PF12840.7 gi|121636485|ref|YP_976708.1| - 0.0092 16.0 1.0 0.029 14.4 0.2 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain CMAS PF02353.20 gi|121636485|ref|YP_976708.1| - 0.0095 15.3 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|121636485|ref|YP_976708.1| - 0.11 12.5 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain HTH_27 PF13463.6 gi|121636485|ref|YP_976708.1| - 0.12 12.9 0.0 0.35 11.4 0.0 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain p450 PF00067.22 gi|121636486|ref|YP_976709.1| - 2.4e-62 211.2 0.0 3e-62 210.9 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF1918 PF08940.11 gi|121636487|ref|YP_976710.1| - 3.1e-27 94.0 0.6 4.3e-27 93.5 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1918) Ribonuc_red_lgC PF02867.15 gi|121636488|ref|YP_976711.1| - 8.7e-134 446.9 0.0 1.7e-103 347.0 0.0 2.1 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|121636488|ref|YP_976711.1| - 8.7e-20 70.5 0.1 2.2e-19 69.2 0.0 1.8 2 0 0 2 2 2 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|121636488|ref|YP_976711.1| - 1e-15 58.1 0.0 2.1e-15 57.0 0.0 1.6 1 0 0 1 1 1 1 ATP cone domain Pribosyltran PF00156.27 gi|121636489|ref|YP_976712.1| - 6.5e-20 71.2 0.1 1.1e-19 70.5 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Hydrolase_4 PF12146.8 gi|121636489|ref|YP_976712.1| - 5.3e-08 32.4 0.0 0.00065 19.0 0.0 2.5 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|121636489|ref|YP_976712.1| - 1.8e-05 24.4 0.0 4.4e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 Dienelactone hydrolase family AAA_33 PF13671.6 gi|121636489|ref|YP_976712.1| - 0.062 13.5 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain Peptidase_S15 PF02129.18 gi|121636489|ref|YP_976712.1| - 0.07 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Pribosyl_synth PF14572.6 gi|121636489|ref|YP_976712.1| - 0.072 13.1 0.2 0.14 12.2 0.2 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|121636489|ref|YP_976712.1| - 0.087 12.3 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase AA_kinase PF00696.28 gi|121636489|ref|YP_976712.1| - 0.091 12.3 0.2 0.16 11.5 0.2 1.4 1 0 0 1 1 1 0 Amino acid kinase family NAPRTase_N PF17767.1 gi|121636491|ref|YP_976714.1| - 1.6e-39 135.2 0.0 1.5e-37 128.8 0.0 2.3 2 0 0 2 2 2 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NAPRTase PF04095.16 gi|121636491|ref|YP_976714.1| - 8.4e-12 45.2 0.0 1.3e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family QRPTase_C PF01729.19 gi|121636491|ref|YP_976714.1| - 1.9e-06 27.7 0.0 2.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 gi|121636491|ref|YP_976714.1| - 0.0017 18.8 0.0 0.0037 17.7 0.0 1.5 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase C-terminal domain PGA_cap PF09587.10 gi|121636492|ref|YP_976715.1| - 1.1e-73 247.9 0.0 1.3e-73 247.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap FAD_binding_3 PF01494.19 gi|121636493|ref|YP_976716.1| - 5e-19 68.8 0.0 7.9e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|121636493|ref|YP_976716.1| - 0.00084 19.8 0.0 0.0037 17.8 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121636493|ref|YP_976716.1| - 0.00085 19.5 0.7 0.0028 17.8 0.1 2.2 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121636493|ref|YP_976716.1| - 0.002 17.7 0.3 0.013 15.1 0.1 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121636493|ref|YP_976716.1| - 0.0048 16.2 0.0 0.0083 15.4 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|121636493|ref|YP_976716.1| - 0.018 14.7 0.1 0.028 14.0 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 gi|121636493|ref|YP_976716.1| - 0.17 11.1 0.0 9.6 5.4 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AHSA1 PF08327.11 gi|121636494|ref|YP_976717.1| - 5.5e-27 94.5 0.1 9.3e-27 93.7 0.1 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein HTH_5 PF01022.20 gi|121636494|ref|YP_976717.1| - 1.2e-13 50.7 0.0 8.5e-13 48.0 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121636494|ref|YP_976717.1| - 2.2e-12 46.8 1.3 2.2e-12 46.8 1.3 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain Polyketide_cyc2 PF10604.9 gi|121636494|ref|YP_976717.1| - 3.9e-10 40.2 2.9 1.3e-09 38.5 2.9 1.9 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport MarR_2 PF12802.7 gi|121636494|ref|YP_976717.1| - 1.6e-05 24.7 1.8 1.6e-05 24.7 1.8 2.3 3 0 0 3 3 2 1 MarR family TrmB PF01978.19 gi|121636494|ref|YP_976717.1| - 8.9e-05 22.3 0.0 0.00017 21.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MDMPI_N PF11716.8 gi|121636494|ref|YP_976717.1| - 0.00017 22.3 6.9 0.00017 22.3 6.9 3.8 2 1 1 3 3 3 1 Mycothiol maleylpyruvate isomerase N-terminal domain GntR PF00392.21 gi|121636494|ref|YP_976717.1| - 0.00023 20.8 0.7 0.0006 19.4 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|121636494|ref|YP_976717.1| - 0.0026 17.5 1.5 0.0098 15.7 1.5 2.0 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|121636494|ref|YP_976717.1| - 0.0033 17.6 0.0 0.0064 16.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|121636494|ref|YP_976717.1| - 0.0079 16.1 0.2 0.017 15.1 0.2 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|121636494|ref|YP_976717.1| - 0.01 16.2 0.1 0.024 15.0 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 gi|121636494|ref|YP_976717.1| - 0.014 15.3 0.1 0.042 13.8 0.1 1.7 2 0 0 2 2 1 0 MarR family HTH_Crp_2 PF13545.6 gi|121636494|ref|YP_976717.1| - 0.019 14.9 0.7 0.048 13.6 0.7 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RP-C PF03428.13 gi|121636494|ref|YP_976717.1| - 0.02 14.5 0.2 0.048 13.3 0.2 1.6 1 0 0 1 1 1 0 Replication protein C N-terminal domain PaaX PF07848.12 gi|121636494|ref|YP_976717.1| - 0.076 13.2 0.2 0.16 12.2 0.2 1.5 1 0 0 1 1 1 0 PaaX-like protein Fe_dep_repress PF01325.19 gi|121636494|ref|YP_976717.1| - 0.21 11.8 0.0 0.46 10.7 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DprA_WH PF17782.1 gi|121636494|ref|YP_976717.1| - 0.34 11.1 4.6 0.17 12.0 1.1 2.4 2 0 0 2 2 2 0 DprA winged helix domain HTH_29 PF13551.6 gi|121636494|ref|YP_976717.1| - 0.42 10.7 2.2 0.6 10.2 0.6 2.2 2 0 0 2 2 1 0 Winged helix-turn helix Glyoxalase_6 PF18029.1 gi|121636495|ref|YP_976718.1| - 3e-20 73.0 0.5 2.7e-12 47.4 0.1 2.2 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase PF00903.25 gi|121636495|ref|YP_976718.1| - 2.1e-16 60.3 0.0 5.9e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|121636495|ref|YP_976718.1| - 4.7e-05 23.6 0.2 0.39 11.0 0.0 2.5 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PE PF00934.20 gi|121636496|ref|YP_976719.1| - 1.7e-33 114.8 17.9 2.8e-33 114.1 17.9 1.4 1 0 0 1 1 1 1 PE family Mut7-C PF01927.16 gi|121636497|ref|YP_976720.1| - 6.4e-45 152.8 0.0 8.4e-45 152.4 0.0 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain Ub-Mut7C PF14451.6 gi|121636497|ref|YP_976720.1| - 9.2e-33 111.9 0.0 9.3e-32 108.7 0.0 2.1 2 0 0 2 2 2 1 Mut7-C ubiquitin DUF5615 PF18480.1 gi|121636497|ref|YP_976720.1| - 0.0074 16.0 0.0 0.032 14.0 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF5615) ThiS PF02597.20 gi|121636497|ref|YP_976720.1| - 0.055 14.1 0.0 0.14 12.8 0.0 1.7 1 0 0 1 1 1 0 ThiS family RHH_1 PF01402.21 gi|121636499|ref|YP_976722.1| - 2.4e-08 33.6 0.3 1.1e-07 31.5 0.1 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121636499|ref|YP_976722.1| - 9.7e-05 22.2 0.1 0.00013 21.8 0.1 1.2 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 MreB_Mbl PF06723.13 gi|121636499|ref|YP_976722.1| - 0.065 12.0 0.1 0.08 11.8 0.1 1.0 1 0 0 1 1 1 0 MreB/Mbl protein CopG_antitoxin PF12441.8 gi|121636499|ref|YP_976722.1| - 0.21 12.1 0.0 0.24 12.0 0.0 1.1 1 0 0 1 1 1 0 CopG antitoxin of type II toxin-antitoxin system PIN PF01850.21 gi|121636500|ref|YP_976723.1| - 4.3e-11 43.4 2.5 5.1e-11 43.1 2.5 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|121636500|ref|YP_976723.1| - 0.29 11.9 2.2 0.4 11.5 2.2 1.3 1 1 0 1 1 1 0 PIN domain Lpp-LpqN PF10738.9 gi|121636501|ref|YP_976724.1| - 4.7e-59 198.7 0.0 6e-59 198.4 0.0 1.1 1 0 0 1 1 1 1 Probable lipoprotein LpqN DcrB PF08786.11 gi|121636501|ref|YP_976724.1| - 0.036 14.2 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 DcrB DUF3558 PF12079.8 gi|121636501|ref|YP_976724.1| - 0.18 11.8 5.4 0.28 11.1 5.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3558) Glyco_hydro_92 PF07971.12 gi|121636502|ref|YP_976725.1| - 2.8e-137 458.4 0.0 3.5e-137 458.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 Glyco_hydro_92N PF17678.1 gi|121636502|ref|YP_976725.1| - 5.1e-55 186.9 6.3 8.1e-55 186.3 6.3 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 N-terminal domain LPG_synthase_TM PF03706.13 gi|121636503|ref|YP_976726.1| - 5.6e-32 111.5 49.1 5.6e-32 111.5 49.1 3.2 3 0 0 3 3 3 1 Lysylphosphatidylglycerol synthase TM region BRI3BP PF14965.6 gi|121636503|ref|YP_976726.1| - 0.0004 19.9 1.9 0.0004 19.9 1.9 2.5 4 0 0 4 4 4 1 Negative regulator of p53/TP53 Pkinase PF00069.25 gi|121636503|ref|YP_976726.1| - 0.034 13.5 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain GntR PF00392.21 gi|121636504|ref|YP_976727.1| - 5.6e-20 70.8 0.7 5.6e-20 70.8 0.7 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 gi|121636504|ref|YP_976727.1| - 5.8e-09 36.4 0.8 5.8e-09 36.4 0.8 1.7 2 0 0 2 2 2 1 FCD domain MarR_2 PF12802.7 gi|121636504|ref|YP_976727.1| - 8e-07 28.9 0.6 1.8e-06 27.8 0.1 1.9 2 0 0 2 2 1 1 MarR family Fe_dep_repress PF01325.19 gi|121636504|ref|YP_976727.1| - 1.6e-05 25.0 0.0 3.5e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|121636504|ref|YP_976727.1| - 1.9e-05 24.6 0.0 3.9e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|121636504|ref|YP_976727.1| - 2.6e-05 24.0 0.0 5.2e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|121636504|ref|YP_976727.1| - 0.00016 21.2 0.2 0.00037 20.0 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|121636504|ref|YP_976727.1| - 0.00023 21.2 0.6 0.0021 18.1 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121636504|ref|YP_976727.1| - 0.00062 19.6 0.0 0.0013 18.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|121636504|ref|YP_976727.1| - 0.00075 19.4 0.1 0.0017 18.2 0.1 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|121636504|ref|YP_976727.1| - 0.0028 18.0 0.0 0.0066 16.8 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_36 PF13730.6 gi|121636504|ref|YP_976727.1| - 0.0038 17.2 0.0 0.0083 16.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 gi|121636504|ref|YP_976727.1| - 0.0041 17.0 0.0 0.01 15.8 0.0 1.6 1 0 0 1 1 1 1 MarR family PaaX PF07848.12 gi|121636504|ref|YP_976727.1| - 0.0049 17.1 0.1 0.012 15.9 0.1 1.6 1 0 0 1 1 1 1 PaaX-like protein pPIWI_RE_X PF13111.6 gi|121636504|ref|YP_976727.1| - 0.0074 15.5 0.9 0.011 14.9 0.9 1.4 1 1 0 1 1 1 1 pPIWI_RE module N-terminal domain HTH_AsnC-type PF13404.6 gi|121636504|ref|YP_976727.1| - 0.0082 15.9 1.3 0.024 14.5 1.3 1.9 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_29 PF13551.6 gi|121636504|ref|YP_976727.1| - 0.015 15.3 0.0 0.036 14.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix LexA_DNA_bind PF01726.16 gi|121636504|ref|YP_976727.1| - 0.016 15.0 0.1 0.054 13.3 0.1 1.9 1 1 0 1 1 1 0 LexA DNA binding domain HTH_IclR PF09339.10 gi|121636504|ref|YP_976727.1| - 0.017 14.9 0.7 0.036 13.9 0.1 1.9 2 0 0 2 2 1 0 IclR helix-turn-helix domain HTH_23 PF13384.6 gi|121636504|ref|YP_976727.1| - 0.03 14.1 0.0 0.067 13.0 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain TFIIE_alpha PF02002.17 gi|121636504|ref|YP_976727.1| - 0.034 14.0 0.0 0.09 12.6 0.0 1.7 2 0 0 2 2 1 0 TFIIE alpha subunit Sigma70_r3 PF04539.16 gi|121636504|ref|YP_976727.1| - 0.039 14.1 0.5 0.65 10.1 0.0 2.4 2 0 0 2 2 2 0 Sigma-70 region 3 YdaS_antitoxin PF15943.5 gi|121636504|ref|YP_976727.1| - 0.054 13.4 0.1 0.14 12.0 0.0 1.8 2 0 0 2 2 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_8 PF02954.19 gi|121636504|ref|YP_976727.1| - 0.061 13.1 0.4 0.17 11.7 0.4 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family RP-C PF03428.13 gi|121636504|ref|YP_976727.1| - 0.068 12.8 2.0 0.077 12.7 0.0 2.2 3 1 1 4 4 4 0 Replication protein C N-terminal domain HTH_CodY PF08222.11 gi|121636504|ref|YP_976727.1| - 0.079 12.5 0.1 0.2 11.2 0.1 1.6 1 0 0 1 1 1 0 CodY helix-turn-helix domain CysG_dimeriser PF10414.9 gi|121636504|ref|YP_976727.1| - 0.089 12.5 4.0 18 5.2 0.3 4.4 5 0 0 5 5 5 0 Sirohaem synthase dimerisation region HTH_50 PF18024.1 gi|121636504|ref|YP_976727.1| - 0.094 12.3 0.0 0.34 10.5 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain FadR_C PF07840.12 gi|121636504|ref|YP_976727.1| - 0.12 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 FadR C-terminal domain TPR_14 PF13428.6 gi|121636504|ref|YP_976727.1| - 0.71 10.8 4.9 15 6.8 0.1 3.9 3 2 1 4 4 4 0 Tetratricopeptide repeat MlaE PF02405.16 gi|121636505|ref|YP_976728.1| - 3.6e-56 190.2 24.8 4.2e-56 190.0 24.8 1.1 1 0 0 1 1 1 1 Permease MlaE MlaE PF02405.16 gi|121636506|ref|YP_976729.1| - 1.1e-50 172.3 26.9 1.3e-50 172.0 26.9 1.1 1 0 0 1 1 1 1 Permease MlaE Mce4_CUP1 PF11887.8 gi|121636507|ref|YP_976730.1| - 2.5e-103 345.0 0.0 7.1e-103 343.5 0.1 1.6 2 0 0 2 2 2 1 Cholesterol uptake porter CUP1 of Mce4, putative MlaD PF02470.20 gi|121636507|ref|YP_976730.1| - 4.9e-14 52.4 0.1 9.9e-14 51.4 0.1 1.5 1 0 0 1 1 1 1 MlaD protein MlaD PF02470.20 gi|121636508|ref|YP_976731.1| - 6.8e-16 58.3 1.2 2.9e-15 56.3 0.3 2.2 2 0 0 2 2 2 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636508|ref|YP_976731.1| - 4.9e-05 22.9 1.6 7e-05 22.4 1.6 1.1 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative EspB PF05802.11 gi|121636508|ref|YP_976731.1| - 0.041 13.9 1.4 0.059 13.4 1.4 1.2 1 0 0 1 1 1 0 Enterobacterial EspB protein Hemagglutinin PF00509.18 gi|121636508|ref|YP_976731.1| - 0.19 10.1 0.0 0.25 9.7 0.0 1.1 1 0 0 1 1 1 0 Haemagglutinin MlaD PF02470.20 gi|121636509|ref|YP_976732.1| - 5.7e-11 42.6 0.1 1.1e-10 41.7 0.1 1.5 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636509|ref|YP_976732.1| - 3.4e-05 23.4 1.4 0.06 12.8 0.0 2.2 1 1 1 2 2 2 2 Cholesterol uptake porter CUP1 of Mce4, putative DUF948 PF06103.11 gi|121636509|ref|YP_976732.1| - 0.00075 19.7 1.7 0.21 11.9 0.1 2.6 2 1 1 3 3 3 2 Bacterial protein of unknown function (DUF948) FlgN PF05130.12 gi|121636509|ref|YP_976732.1| - 0.023 15.2 0.9 0.04 14.4 0.9 1.3 1 0 0 1 1 1 0 FlgN protein PLAC9 PF15205.6 gi|121636509|ref|YP_976732.1| - 0.058 13.8 0.0 0.43 11.0 0.0 2.4 2 0 0 2 2 2 0 Placenta-specific protein 9 Spc7 PF08317.11 gi|121636509|ref|YP_976732.1| - 0.16 10.8 0.2 0.23 10.3 0.2 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein PspA_IM30 PF04012.12 gi|121636509|ref|YP_976732.1| - 0.19 11.3 1.0 0.27 10.8 1.0 1.1 1 0 0 1 1 1 0 PspA/IM30 family MCC-bdg_PDZ PF10506.9 gi|121636509|ref|YP_976732.1| - 0.19 11.7 1.8 4.8 7.3 0.1 2.8 2 1 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF1664 PF07889.12 gi|121636509|ref|YP_976732.1| - 0.19 11.7 0.4 5.1 7.2 0.0 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) IFT57 PF10498.9 gi|121636509|ref|YP_976732.1| - 0.3 10.0 0.1 0.63 8.9 0.1 1.3 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 DUF4107 PF13389.6 gi|121636509|ref|YP_976732.1| - 0.36 11.0 2.5 11 6.1 1.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4107) MlaD PF02470.20 gi|121636510|ref|YP_976733.1| - 3.5e-12 46.5 0.0 5.7e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636510|ref|YP_976733.1| - 0.0003 20.3 2.0 0.00056 19.4 2.0 1.4 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative Vps5 PF09325.10 gi|121636510|ref|YP_976733.1| - 0.0074 15.9 0.1 0.6 9.6 0.2 2.1 1 1 1 2 2 2 2 Vps5 C terminal like Baculo_PEP_C PF04513.12 gi|121636510|ref|YP_976733.1| - 0.088 12.8 4.3 2.5 8.1 0.3 2.3 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MlaD PF02470.20 gi|121636511|ref|YP_976734.1| - 2.9e-11 43.5 0.0 6.6e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636511|ref|YP_976734.1| - 0.05 13.1 3.9 0.099 12.1 1.0 2.1 2 1 1 3 3 3 0 Cholesterol uptake porter CUP1 of Mce4, putative Baculo_PEP_C PF04513.12 gi|121636511|ref|YP_976734.1| - 0.082 13.0 7.1 0.18 11.8 3.4 2.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MlaD PF02470.20 gi|121636512|ref|YP_976735.1| - 6.6e-16 58.4 0.2 1.2e-15 57.5 0.2 1.5 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121636512|ref|YP_976735.1| - 3e-07 30.1 0.6 4.7e-07 29.5 0.6 1.2 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative DUF948 PF06103.11 gi|121636512|ref|YP_976735.1| - 0.00011 22.4 0.2 0.2 11.9 0.0 2.7 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 gi|121636512|ref|YP_976735.1| - 0.026 14.6 1.4 3.6 7.6 0.8 2.2 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1S3 PF15753.5 gi|121636512|ref|YP_976735.1| - 0.085 13.0 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 FAA_hydrolase_N PF09298.11 gi|121636512|ref|YP_976735.1| - 0.17 12.1 0.1 17 5.6 0.0 2.8 1 1 2 3 3 3 0 Fumarylacetoacetase N-terminal PIN PF01850.21 gi|121636513|ref|YP_976736.1| - 9.2e-15 55.2 0.0 1.1e-14 55.0 0.0 1.1 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121636513|ref|YP_976736.1| - 0.0032 17.2 0.0 0.0054 16.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PhdYeFM_antitox PF02604.19 gi|121636514|ref|YP_976737.1| - 2.1e-10 40.2 0.1 2.3e-10 40.1 0.1 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF4143 PF13635.6 gi|121636515|ref|YP_976738.1| - 1.4e-25 89.8 0.0 2e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_14 PF13173.6 gi|121636515|ref|YP_976738.1| - 1.4e-20 73.7 0.0 3.3e-20 72.5 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|121636515|ref|YP_976738.1| - 0.086 13.2 0.1 0.2 12.0 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain DUF2746 PF10874.8 gi|121636515|ref|YP_976738.1| - 0.12 12.8 0.0 0.49 10.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2746) PIN PF01850.21 gi|121636516|ref|YP_976739.1| - 2.2e-12 47.5 1.5 2.6e-12 47.3 1.5 1.0 1 0 0 1 1 1 1 PIN domain MazE_antitoxin PF04014.18 gi|121636517|ref|YP_976740.1| - 1.2e-07 31.4 0.0 1.8e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin MraZ PF02381.18 gi|121636517|ref|YP_976740.1| - 0.00098 19.1 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like AbrB-like PF14250.6 gi|121636517|ref|YP_976740.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.5 2 0 0 2 2 2 0 AbrB-like transcriptional regulator HATPase_c PF02518.26 gi|121636518|ref|YP_976741.1| - 2.7e-20 72.9 0.0 3.5e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121636518|ref|YP_976741.1| - 0.00035 20.5 0.2 0.00053 20.0 0.2 1.4 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HPTransfase PF10090.9 gi|121636518|ref|YP_976741.1| - 0.053 13.3 0.0 6.3 6.6 0.0 2.2 2 0 0 2 2 2 0 Histidine phosphotransferase C-terminal domain HalOD1 PF18545.1 gi|121636518|ref|YP_976741.1| - 0.097 13.0 0.1 0.23 11.8 0.1 1.7 1 0 0 1 1 1 0 Halobacterial output domain 1 HATPase_c_5 PF14501.6 gi|121636518|ref|YP_976741.1| - 0.13 12.2 0.0 0.41 10.6 0.0 1.8 1 1 0 1 1 1 0 GHKL domain HAMP PF00672.25 gi|121636519|ref|YP_976742.1| - 1.3e-13 51.1 0.3 2.5e-13 50.2 0.3 1.5 1 0 0 1 1 1 1 HAMP domain HisKA PF00512.25 gi|121636519|ref|YP_976742.1| - 4.7e-06 26.5 0.6 4.6e-05 23.4 0.2 2.6 1 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PhaG_MnhG_YufB PF03334.14 gi|121636519|ref|YP_976742.1| - 1.1 9.6 5.4 11 6.3 5.4 2.3 1 1 0 1 1 1 0 Na+/H+ antiporter subunit Response_reg PF00072.24 gi|121636520|ref|YP_976743.1| - 1.9e-29 102.1 0.0 2.9e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636520|ref|YP_976743.1| - 1.2e-22 79.7 0.1 2.2e-22 78.9 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal PepSY PF03413.19 gi|121636521|ref|YP_976744.1| - 9.1e-05 23.0 0.0 0.00015 22.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain PepSY_2 PF13670.6 gi|121636521|ref|YP_976744.1| - 0.0034 17.3 1.2 0.0048 16.9 1.2 1.2 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain TrbI PF03743.14 gi|121636521|ref|YP_976744.1| - 0.025 14.4 0.1 0.028 14.3 0.1 1.0 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein Rib PF08428.10 gi|121636521|ref|YP_976744.1| - 0.068 13.2 0.3 0.12 12.3 0.3 1.5 1 1 0 1 1 1 0 Rib/alpha-like repeat DUF1529 PF07485.11 gi|121636522|ref|YP_976745.1| - 7.3e-92 303.5 0.0 8.2e-46 154.8 0.0 2.1 2 0 0 2 2 2 2 Domain of Unknown Function (DUF1259) DUF3168 PF11367.8 gi|121636522|ref|YP_976745.1| - 2.1 8.5 7.5 0.23 11.6 0.5 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3168) PepSY_2 PF13670.6 gi|121636522|ref|YP_976745.1| - 6.2 6.9 6.2 7.7 6.6 2.8 2.8 2 1 0 2 2 2 0 Peptidase propeptide and YPEB domain Resolvase PF00239.21 gi|121636523|ref|YP_976746.1| - 3.3e-15 56.5 1.3 5e-15 55.9 1.3 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|121636523|ref|YP_976746.1| - 0.0066 16.6 0.0 0.017 15.3 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121636523|ref|YP_976746.1| - 0.026 14.3 0.5 0.061 13.1 0.1 1.9 2 0 0 2 2 2 0 Homeodomain-like domain HTH_OrfB_IS605 PF12323.8 gi|121636524|ref|YP_976747.1| - 1.8e-10 40.2 0.3 1.8e-10 40.2 0.3 2.2 3 0 0 3 3 3 1 Helix-turn-helix domain OrfB_IS605 PF01385.19 gi|121636524|ref|YP_976747.1| - 6e-05 23.3 0.5 0.00016 21.9 0.0 2.0 2 0 0 2 2 2 1 Probable transposase PSK_trans_fac PF07704.11 gi|121636526|ref|YP_976749.1| - 2.5e-23 82.6 1.7 2.8e-23 82.5 1.7 1.0 1 0 0 1 1 1 1 Rv0623-like transcription factor PIN PF01850.21 gi|121636527|ref|YP_976750.1| - 1.2e-14 54.8 0.1 1.3e-14 54.7 0.1 1.0 1 0 0 1 1 1 1 PIN domain VbhA PF18495.1 gi|121636529|ref|YP_976752.1| - 0.001 18.9 1.2 0.0026 17.6 1.2 1.7 1 0 0 1 1 1 1 Antitoxin VbhA DUF4926 PF16277.5 gi|121636530|ref|YP_976753.1| - 4.5e-21 74.0 0.2 5.5e-21 73.7 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4926) Phage_G PF02306.15 gi|121636530|ref|YP_976753.1| - 0.12 12.1 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Major spike protein (G protein) SH3_13 PF18335.1 gi|121636530|ref|YP_976753.1| - 0.22 11.4 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 ATP-dependent RecD-like DNA helicase SH3 domain SEC-C PF02810.15 gi|121636532|ref|YP_976755.1| - 1.7e-09 37.4 6.0 2.4e-09 36.9 6.0 1.2 1 0 0 1 1 1 1 SEC-C motif DUF2384 PF09722.10 gi|121636532|ref|YP_976755.1| - 0.0014 18.6 0.4 0.0096 15.9 0.1 2.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2384) Se-cys_synth_N PF12390.8 gi|121636532|ref|YP_976755.1| - 7.5 6.9 11.0 2.3 8.5 0.6 4.2 4 0 0 4 4 4 0 Selenocysteine synthase N terminal PIN PF01850.21 gi|121636537|ref|YP_976760.1| - 5.1e-10 39.9 0.0 6.4e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 PIN domain GalP_UDP_transf PF01087.22 gi|121636538|ref|YP_976761.1| - 2.9e-42 145.2 0.0 4.9e-42 144.4 0.0 1.3 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain GalP_UDP_tr_C PF02744.17 gi|121636538|ref|YP_976761.1| - 2.8e-12 46.7 0.0 4.4e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain KNOX2 PF03791.13 gi|121636538|ref|YP_976761.1| - 0.062 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 KNOX2 domain GalKase_gal_bdg PF10509.9 gi|121636539|ref|YP_976762.1| - 1.5e-15 56.5 0.1 4.2e-15 55.0 0.1 1.8 1 0 0 1 1 1 1 Galactokinase galactose-binding signature GHMP_kinases_C PF08544.13 gi|121636539|ref|YP_976762.1| - 2e-13 50.5 0.2 5.3e-13 49.1 0.2 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|121636539|ref|YP_976762.1| - 3.1e-11 43.3 2.3 8.4e-11 42.0 2.3 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain zf_C2H2_13 PF18508.1 gi|121636540|ref|YP_976763.1| - 0.021 14.4 0.1 0.041 13.5 0.1 1.4 1 0 0 1 1 1 0 Zinc finger domain DUF3040 PF11239.8 gi|121636540|ref|YP_976763.1| - 0.032 14.5 2.0 2.3 8.5 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF3357 PF11837.8 gi|121636540|ref|YP_976763.1| - 0.065 13.7 1.7 0.14 12.6 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3357) DUF732 PF05305.14 gi|121636541|ref|YP_976764.1| - 2.2e-07 31.1 1.0 9.1e-06 26.0 0.0 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF732) DZR PF12773.7 gi|121636541|ref|YP_976764.1| - 0.03 14.4 0.6 0.065 13.3 0.6 1.5 1 0 0 1 1 1 0 Double zinc ribbon Big_6 PF17936.1 gi|121636541|ref|YP_976764.1| - 0.032 14.5 0.1 0.095 13.0 0.0 1.8 1 1 0 1 1 1 0 Bacterial Ig domain zinc_ribbon_2 PF13240.6 gi|121636541|ref|YP_976764.1| - 3.7 7.4 5.2 64 3.5 5.2 2.5 1 1 0 1 1 1 0 zinc-ribbon domain PSK_trans_fac PF07704.11 gi|121636542|ref|YP_976765.1| - 2.1e-27 95.7 3.1 2.3e-27 95.6 3.1 1.0 1 0 0 1 1 1 1 Rv0623-like transcription factor MatP_C PF17414.2 gi|121636542|ref|YP_976765.1| - 0.11 12.7 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 MatP C-terminal ribbon-helix-helix domain PIN PF01850.21 gi|121636543|ref|YP_976766.1| - 9.6e-15 55.2 0.0 1.1e-14 55.0 0.0 1.0 1 0 0 1 1 1 1 PIN domain SNARE_assoc PF09335.11 gi|121636544|ref|YP_976767.1| - 2.9e-21 76.2 8.4 2.9e-21 76.2 8.4 2.8 3 1 0 3 3 3 1 SNARE associated Golgi protein FxsA PF04186.13 gi|121636544|ref|YP_976767.1| - 0.012 15.7 12.9 1 9.5 2.5 3.7 2 2 1 3 3 3 0 FxsA cytoplasmic membrane protein DUF5313 PF17240.2 gi|121636544|ref|YP_976767.1| - 0.24 11.8 1.5 0.72 10.3 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5313) PhdYeFM_antitox PF02604.19 gi|121636545|ref|YP_976768.1| - 1.3e-08 34.5 0.0 1.4e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system PIN PF01850.21 gi|121636546|ref|YP_976769.1| - 7e-16 58.8 1.7 8.2e-16 58.6 1.7 1.1 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121636546|ref|YP_976769.1| - 0.03 14.1 0.1 0.059 13.1 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5615) FIST PF08495.10 gi|121636547|ref|YP_976770.1| - 9.1e-28 97.4 2.7 1e-26 94.0 0.1 2.5 2 1 0 2 2 2 1 FIST N domain FIST_C PF10442.9 gi|121636547|ref|YP_976770.1| - 1e-25 90.2 0.8 7.6e-25 87.4 0.1 2.1 2 0 0 2 2 2 1 FIST C domain AAA_30 PF13604.6 gi|121636548|ref|YP_976771.1| - 8.3e-37 126.8 5.9 8.3e-37 126.8 5.9 2.3 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|121636548|ref|YP_976771.1| - 2e-29 102.8 0.5 1.2e-28 100.3 0.3 2.1 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 gi|121636548|ref|YP_976771.1| - 4.2e-14 52.1 0.1 1e-13 50.9 0.1 1.7 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_11 PF13086.6 gi|121636548|ref|YP_976771.1| - 1.7e-10 41.1 0.1 3.7e-07 30.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain Helicase_RecD PF05127.14 gi|121636548|ref|YP_976771.1| - 6.4e-10 39.2 0.1 1.2e-09 38.3 0.1 1.4 1 0 0 1 1 1 1 Helicase AAA_22 PF13401.6 gi|121636548|ref|YP_976771.1| - 1.1e-08 35.5 0.1 3.6e-08 33.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 gi|121636548|ref|YP_976771.1| - 4e-08 33.3 0.1 0.00061 19.6 0.0 3.1 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.21 gi|121636548|ref|YP_976771.1| - 3.7e-06 26.7 0.3 0.00029 20.5 0.4 2.1 1 1 1 2 2 2 1 UvrD/REP helicase N-terminal domain SH3_13 PF18335.1 gi|121636548|ref|YP_976771.1| - 9.1e-05 22.2 0.0 0.00017 21.3 0.0 1.4 1 0 0 1 1 1 1 ATP-dependent RecD-like DNA helicase SH3 domain AAA_16 PF13191.6 gi|121636548|ref|YP_976771.1| - 0.0002 21.8 1.8 0.00053 20.4 1.8 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|121636548|ref|YP_976771.1| - 0.00077 19.1 0.8 0.00077 19.1 0.8 2.3 2 0 0 2 2 2 1 AAA domain Herpes_Helicase PF02689.14 gi|121636548|ref|YP_976771.1| - 0.0022 16.0 0.1 0.082 10.8 0.1 2.3 3 0 0 3 3 3 1 Helicase AAA_28 PF13521.6 gi|121636548|ref|YP_976771.1| - 0.0044 17.3 2.8 0.014 15.6 2.8 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|121636548|ref|YP_976771.1| - 0.0064 15.9 0.1 0.012 15.0 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 gi|121636548|ref|YP_976771.1| - 0.011 14.8 0.0 0.029 13.4 0.0 1.7 1 0 0 1 1 1 0 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|121636548|ref|YP_976771.1| - 0.013 15.4 0.0 0.031 14.2 0.0 1.7 1 0 0 1 1 1 0 NTPase AAA_29 PF13555.6 gi|121636548|ref|YP_976771.1| - 0.026 14.3 0.0 0.073 12.8 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain DEAD PF00270.29 gi|121636548|ref|YP_976771.1| - 0.029 14.2 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase TrwB_AAD_bind PF10412.9 gi|121636548|ref|YP_976771.1| - 0.039 12.9 0.0 0.064 12.2 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATPase PF06745.13 gi|121636548|ref|YP_976771.1| - 0.056 12.8 0.0 0.13 11.6 0.0 1.6 2 0 0 2 2 2 0 KaiC AAA_23 PF13476.6 gi|121636548|ref|YP_976771.1| - 0.077 13.5 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|121636548|ref|YP_976771.1| - 0.079 13.0 0.2 0.39 10.7 0.2 2.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) SRP54 PF00448.22 gi|121636548|ref|YP_976771.1| - 0.096 12.3 0.7 0.2 11.3 0.7 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MukB PF04310.12 gi|121636548|ref|YP_976771.1| - 0.15 11.9 0.1 0.26 11.1 0.1 1.3 1 0 0 1 1 1 0 MukB N-terminal DUF2075 PF09848.9 gi|121636548|ref|YP_976771.1| - 0.2 10.9 0.0 0.32 10.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 gi|121636548|ref|YP_976771.1| - 0.22 11.1 0.5 0.45 10.1 0.5 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SAF PF08666.12 gi|121636548|ref|YP_976771.1| - 0.24 12.0 2.2 4.7 7.9 0.1 2.6 2 0 0 2 2 2 0 SAF domain PhoH PF02562.16 gi|121636548|ref|YP_976771.1| - 0.64 9.4 4.5 0.93 8.9 1.0 2.4 2 1 0 2 2 2 0 PhoH-like protein UvrD-helicase PF00580.21 gi|121636549|ref|YP_976772.1| - 9.4e-60 202.8 0.0 2e-59 201.7 0.0 1.5 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|121636549|ref|YP_976772.1| - 4.3e-23 82.3 0.0 1.6e-22 80.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain UvrD_C PF13361.6 gi|121636549|ref|YP_976772.1| - 2.6e-14 53.4 0.0 7.3e-07 28.9 0.0 2.6 2 1 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|121636549|ref|YP_976772.1| - 1.7e-07 31.1 6.6 0.0029 17.4 0.2 3.0 3 0 0 3 3 3 2 AAA domain UvrD_C_2 PF13538.6 gi|121636549|ref|YP_976772.1| - 4.2e-07 29.7 0.4 0.02 14.7 0.3 2.9 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 gi|121636549|ref|YP_976772.1| - 0.0014 18.9 0.4 0.24 11.7 0.1 3.0 3 1 0 3 3 3 1 AAA domain PhoH PF02562.16 gi|121636549|ref|YP_976772.1| - 0.028 13.9 0.0 1.5 8.2 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_11 PF13086.6 gi|121636549|ref|YP_976772.1| - 0.029 14.1 0.0 1.7 8.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|121636549|ref|YP_976772.1| - 0.051 13.3 0.0 4.1 7.1 0.0 2.9 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 gi|121636549|ref|YP_976772.1| - 3.2 7.3 7.7 0.5 9.9 0.1 3.3 4 0 0 4 4 4 0 AAA domain Exonuc_V_gamma PF04257.14 gi|121636550|ref|YP_976773.1| - 6.7e-201 669.4 0.0 8.6e-201 669.1 0.0 1.0 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit RecC_C PF17946.1 gi|121636550|ref|YP_976773.1| - 3.2e-46 157.6 3.3 6.6e-45 153.4 0.2 2.9 2 0 0 2 2 2 2 RecC C-terminal domain ECH_1 PF00378.20 gi|121636551|ref|YP_976774.1| - 2.1e-27 96.1 1.5 2.4e-27 95.8 1.5 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636551|ref|YP_976774.1| - 1.4e-13 51.1 0.9 1.6e-13 50.9 0.9 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase CLP_protease PF00574.23 gi|121636551|ref|YP_976774.1| - 0.012 15.5 1.7 0.058 13.3 0.6 2.1 1 1 1 2 2 2 0 Clp protease Arg_repressor_C PF02863.18 gi|121636551|ref|YP_976774.1| - 0.64 9.9 3.2 5.2 7.0 0.0 3.0 3 1 0 3 3 3 0 Arginine repressor, C-terminal domain DUF4748 PF15932.5 gi|121636552|ref|YP_976775.1| - 0.0046 16.7 0.2 0.0046 16.7 0.2 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4748) DUF4190 PF13828.6 gi|121636552|ref|YP_976775.1| - 0.1 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4190) Lactamase_B PF00753.27 gi|121636553|ref|YP_976776.1| - 3.6e-19 69.6 6.2 4.6e-19 69.2 6.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121636553|ref|YP_976776.1| - 0.0019 17.7 2.0 0.003 17.1 2.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain VapB_antitoxin PF09957.9 gi|121636554|ref|YP_976777.1| - 4.7e-20 71.2 1.1 5.6e-20 71.0 1.1 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB Ribosomal_L33 PF00471.20 gi|121636555|ref|YP_976778.1| - 2.8e-23 82.1 5.9 3.1e-23 82.0 5.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L33 zf-ribbon_3 PF13248.6 gi|121636555|ref|YP_976778.1| - 0.0056 16.1 1.4 0.021 14.3 0.2 2.0 2 0 0 2 2 2 1 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|121636555|ref|YP_976778.1| - 0.015 15.2 1.5 1.6 8.7 0.4 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Zn-ribbon_8 PF09723.10 gi|121636555|ref|YP_976778.1| - 0.016 15.3 2.6 0.034 14.3 2.6 1.5 1 1 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 gi|121636555|ref|YP_976778.1| - 0.02 14.9 0.9 0.024 14.7 0.9 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Sec23_Sec24 PF04810.15 gi|121636555|ref|YP_976778.1| - 0.03 14.4 1.4 0.05 13.6 0.0 1.9 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger TF_Zn_Ribbon PF08271.12 gi|121636555|ref|YP_976778.1| - 0.049 13.2 2.0 0.11 12.0 2.1 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|121636555|ref|YP_976778.1| - 0.054 13.2 1.5 0.054 13.2 1.5 2.0 2 0 0 2 2 2 0 zinc-ribbon domain NOB1_Zn_bind PF08772.11 gi|121636555|ref|YP_976778.1| - 0.06 13.5 4.3 0.12 12.6 4.3 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.7 gi|121636555|ref|YP_976778.1| - 0.083 12.9 3.0 0.15 12.1 3.0 1.6 1 1 0 1 1 1 0 Double zinc ribbon TFIIS_C PF01096.18 gi|121636555|ref|YP_976778.1| - 0.11 12.3 3.4 3.1 7.7 0.5 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Nudix_N_2 PF14803.6 gi|121636555|ref|YP_976778.1| - 0.14 12.1 4.1 0.2 11.6 0.6 2.2 2 0 0 2 2 2 0 Nudix N-terminal MaoC_dehydrat_N PF13452.6 gi|121636556|ref|YP_976779.1| - 4e-27 94.9 0.3 4.6e-27 94.7 0.3 1.0 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase MaoC_dehydratas PF01575.19 gi|121636557|ref|YP_976780.1| - 6.3e-29 100.0 0.0 8.4e-29 99.6 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121636557|ref|YP_976780.1| - 4.1e-05 23.7 0.0 5.2e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase MaoC_dehydrat_N PF13452.6 gi|121636558|ref|YP_976781.1| - 2.4e-25 89.2 0.0 3.1e-25 88.8 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase SecE PF00584.20 gi|121636559|ref|YP_976782.1| - 1.4e-18 66.6 1.2 2.5e-18 65.8 1.2 1.4 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex SUR7 PF06687.12 gi|121636559|ref|YP_976782.1| - 0.042 13.5 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF1510 PF07423.11 gi|121636559|ref|YP_976782.1| - 0.055 13.6 0.0 0.082 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) NusG PF02357.19 gi|121636560|ref|YP_976783.1| - 1.1e-24 86.7 0.0 1.9e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 gi|121636560|ref|YP_976783.1| - 0.0034 17.3 0.0 0.015 15.2 0.0 2.1 1 1 1 2 2 2 1 KOW motif Ribosomal_L11_N PF03946.14 gi|121636561|ref|YP_976784.1| - 1e-31 108.5 0.2 1.9e-31 107.7 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|121636561|ref|YP_976784.1| - 4.7e-28 97.5 1.9 4.7e-28 97.5 1.9 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 gi|121636562|ref|YP_976785.1| - 3e-50 170.8 0.0 3.7e-50 170.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family CMAS PF02353.20 gi|121636563|ref|YP_976786.1| - 1.2e-119 398.6 0.0 1.4e-119 398.4 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636563|ref|YP_976786.1| - 7.5e-09 35.6 0.0 1.1e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636563|ref|YP_976786.1| - 3.9e-08 33.9 0.0 7.4e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636563|ref|YP_976786.1| - 7.3e-07 29.7 0.0 1.5e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636563|ref|YP_976786.1| - 1.8e-06 28.6 0.0 3.3e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|121636563|ref|YP_976786.1| - 0.019 14.6 0.1 0.043 13.4 0.1 1.6 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|121636563|ref|YP_976786.1| - 0.021 14.6 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|121636563|ref|YP_976786.1| - 0.024 14.4 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_PK PF05891.12 gi|121636563|ref|YP_976786.1| - 0.082 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_9 PF08003.11 gi|121636563|ref|YP_976786.1| - 0.11 11.4 0.0 0.23 10.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|121636564|ref|YP_976787.1| - 1.2e-124 415.1 0.1 1.3e-124 414.9 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636564|ref|YP_976787.1| - 8.1e-07 29.0 0.0 1.4e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636564|ref|YP_976787.1| - 5.3e-06 27.0 0.0 1.3e-05 25.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636564|ref|YP_976787.1| - 2.4e-05 25.0 0.0 8.2e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636564|ref|YP_976787.1| - 0.0022 18.7 0.0 0.006 17.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636564|ref|YP_976787.1| - 0.046 13.5 0.0 0.17 11.7 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_8 PF05148.15 gi|121636564|ref|YP_976787.1| - 0.051 13.4 0.0 11 5.8 0.0 2.3 2 0 0 2 2 2 0 Hypothetical methyltransferase CMAS PF02353.20 gi|121636565|ref|YP_976788.1| - 1.2e-123 411.8 0.0 1.3e-123 411.6 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|121636565|ref|YP_976788.1| - 5e-11 42.7 0.0 6.2e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636565|ref|YP_976788.1| - 8.3e-10 39.2 0.0 1.8e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636565|ref|YP_976788.1| - 1.5e-09 38.3 0.0 3.4e-09 37.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636565|ref|YP_976788.1| - 3.2e-07 31.0 0.0 6.2e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain FliN_N PF16973.5 gi|121636565|ref|YP_976788.1| - 0.0064 16.3 0.5 0.015 15.1 0.1 1.8 2 0 0 2 2 2 1 Flagellar motor switch protein FliN N-terminal Methyltransf_9 PF08003.11 gi|121636565|ref|YP_976788.1| - 0.016 14.2 0.1 0.045 12.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1698) Methyltransf_31 PF13847.6 gi|121636565|ref|YP_976788.1| - 0.027 14.3 0.0 0.094 12.5 0.0 2.0 2 1 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 gi|121636565|ref|YP_976788.1| - 0.051 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|121636565|ref|YP_976788.1| - 0.068 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Pilus_CpaD PF09476.10 gi|121636565|ref|YP_976788.1| - 0.094 12.4 0.1 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) PCMT PF01135.19 gi|121636565|ref|YP_976788.1| - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|121636566|ref|YP_976789.1| - 3.6e-116 387.2 0.0 4e-116 387.1 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 gi|121636566|ref|YP_976789.1| - 8.3e-08 32.8 0.0 4.7e-07 30.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636566|ref|YP_976789.1| - 1.1e-06 28.6 0.0 1.9e-06 27.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636566|ref|YP_976789.1| - 3.9e-06 27.5 0.0 1e-05 26.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636566|ref|YP_976789.1| - 7.3e-06 26.5 0.0 2.6e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121636566|ref|YP_976789.1| - 0.0001 22.1 0.0 0.00023 21.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|121636566|ref|YP_976789.1| - 0.0022 17.8 0.0 0.0035 17.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ku_PK_bind PF08785.11 gi|121636566|ref|YP_976789.1| - 0.0038 17.4 0.0 0.0068 16.5 0.0 1.4 1 0 0 1 1 1 1 Ku C terminal domain like Arg_decarb_HB PF17810.1 gi|121636566|ref|YP_976789.1| - 0.018 15.3 0.1 0.04 14.2 0.1 1.6 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain Methyltransf_32 PF13679.6 gi|121636566|ref|YP_976789.1| - 0.032 14.2 0.0 0.11 12.5 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain MetW PF07021.12 gi|121636566|ref|YP_976789.1| - 0.046 13.3 0.0 0.15 11.6 0.0 1.8 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW MTS PF05175.14 gi|121636566|ref|YP_976789.1| - 0.06 12.9 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Abhydrolase_1 PF00561.20 gi|121636567|ref|YP_976790.1| - 7.2e-24 84.8 0.0 5.7e-17 62.2 0.0 2.0 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121636567|ref|YP_976790.1| - 1.7e-13 50.4 0.0 6.8e-13 48.4 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121636567|ref|YP_976790.1| - 4.9e-12 46.9 7.7 6e-12 46.6 7.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 gi|121636567|ref|YP_976790.1| - 0.00031 20.9 0.1 0.00051 20.2 0.1 1.3 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_3 PF07859.13 gi|121636567|ref|YP_976790.1| - 0.0093 15.8 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 alpha/beta hydrolase fold Eno-Rase_NADH_b PF12242.8 gi|121636567|ref|YP_976790.1| - 0.013 15.2 0.0 0.041 13.6 0.0 1.8 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Ndr PF03096.14 gi|121636567|ref|YP_976790.1| - 0.019 13.7 0.0 0.027 13.2 0.0 1.1 1 0 0 1 1 1 0 Ndr family FSH1 PF03959.13 gi|121636567|ref|YP_976790.1| - 0.02 14.5 0.0 0.06 13.0 0.0 1.7 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 gi|121636567|ref|YP_976790.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein ABC1 PF03109.16 gi|121636568|ref|YP_976791.1| - 4.9e-36 123.5 0.1 8.9e-36 122.7 0.1 1.4 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 gi|121636568|ref|YP_976791.1| - 9.7e-06 25.7 6.5 0.00061 19.8 6.5 3.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|121636568|ref|YP_976791.1| - 0.17 11.5 0.0 0.56 9.8 0.0 1.8 2 0 0 2 2 2 0 RIO1 family Glyco_hydro_38N PF01074.22 gi|121636569|ref|YP_976792.1| - 5.1e-70 236.1 0.0 6.9e-70 235.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain NPCBM_assoc PF10633.9 gi|121636569|ref|YP_976792.1| - 7.6e-19 67.7 2.1 6.3e-17 61.6 0.1 3.5 3 0 0 3 3 3 1 NPCBM-associated, NEW3 domain of alpha-galactosidase Alpha-mann_mid PF09261.11 gi|121636569|ref|YP_976792.1| - 1.7e-13 50.5 0.0 3.2e-13 49.6 0.0 1.5 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38C PF07748.13 gi|121636569|ref|YP_976792.1| - 0.00012 22.2 0.0 0.0002 21.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain PT-VENN PF04829.13 gi|121636570|ref|YP_976793.1| - 4.5 7.4 7.2 0.44 10.7 1.1 2.3 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif ROK PF00480.20 gi|121636571|ref|YP_976794.1| - 5e-61 206.8 0.6 6e-61 206.5 0.6 1.0 1 0 0 1 1 1 1 ROK family Ribosomal_L10 PF00466.20 gi|121636572|ref|YP_976795.1| - 5.3e-26 90.7 0.1 9.2e-26 89.9 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 DUF3182 PF11379.8 gi|121636572|ref|YP_976795.1| - 0.0046 16.0 0.1 0.0061 15.6 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3182) Ribosomal_L12 PF00542.19 gi|121636573|ref|YP_976796.1| - 7.8e-28 96.6 8.2 7.8e-28 96.6 8.2 2.1 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 gi|121636573|ref|YP_976796.1| - 1.4e-19 69.5 10.4 2.4e-18 65.6 8.5 2.6 2 0 0 2 2 2 2 Ribosomal protein L7/L12 dimerisation domain TetR_C_33 PF13305.6 gi|121636574|ref|YP_976797.1| - 2.3e-17 63.6 3.6 2.3e-17 63.6 3.6 2.1 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121636574|ref|YP_976797.1| - 7.8e-12 44.8 0.1 1.6e-11 43.8 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family RPE65 PF03055.15 gi|121636575|ref|YP_976798.1| - 4.2e-113 379.0 0.0 4.9e-113 378.8 0.0 1.0 1 0 0 1 1 1 1 Retinal pigment epithelial membrane protein ABC_tran PF00005.27 gi|121636576|ref|YP_976799.1| - 5e-27 95.1 0.0 9e-27 94.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121636576|ref|YP_976799.1| - 5.6e-10 39.5 0.2 8e-06 25.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|121636576|ref|YP_976799.1| - 0.0032 17.2 0.0 0.0077 16.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|121636576|ref|YP_976799.1| - 0.0056 16.3 0.1 0.022 14.3 0.1 1.9 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|121636576|ref|YP_976799.1| - 0.0078 15.7 0.1 0.2 11.0 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|121636576|ref|YP_976799.1| - 0.012 15.5 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|121636576|ref|YP_976799.1| - 0.017 15.6 0.0 0.09 13.2 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|121636576|ref|YP_976799.1| - 0.02 14.3 0.0 0.25 10.7 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|121636576|ref|YP_976799.1| - 0.027 14.4 0.2 0.46 10.4 0.1 2.4 1 1 1 2 2 2 0 NACHT domain AAA_22 PF13401.6 gi|121636576|ref|YP_976799.1| - 0.029 14.6 0.1 0.16 12.2 0.1 2.2 1 1 0 1 1 1 0 AAA domain PPV_E1_C PF00519.17 gi|121636576|ref|YP_976799.1| - 0.05 12.4 0.1 0.1 11.4 0.0 1.5 2 0 0 2 2 2 0 Papillomavirus helicase AAA_30 PF13604.6 gi|121636576|ref|YP_976799.1| - 0.08 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|121636576|ref|YP_976799.1| - 0.088 13.2 0.1 0.28 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain AAA_7 PF12775.7 gi|121636576|ref|YP_976799.1| - 0.2 11.2 0.0 0.4 10.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF3729 PF12526.8 gi|121636576|ref|YP_976799.1| - 0.21 13.2 0.0 0.33 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3729) Adeno_IVa2 PF02456.15 gi|121636576|ref|YP_976799.1| - 0.22 10.3 0.2 2.5 6.8 0.1 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein DUF5615 PF18480.1 gi|121636577|ref|YP_976800.1| - 0.044 13.5 0.0 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) VapB_antitoxin PF09957.9 gi|121636578|ref|YP_976801.1| - 2.8e-16 59.1 1.9 3.2e-16 59.0 1.9 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB CPBP PF02517.16 gi|121636579|ref|YP_976802.1| - 1.5e-13 50.9 9.2 1.5e-13 50.9 9.2 2.4 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease DUF1295 PF06966.12 gi|121636579|ref|YP_976802.1| - 0.016 14.8 1.2 0.027 14.0 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1295) ACR_tran PF00873.19 gi|121636579|ref|YP_976802.1| - 3.5 5.2 5.6 5.1 4.6 5.6 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family PemK_toxin PF02452.17 gi|121636580|ref|YP_976803.1| - 4.7e-11 43.1 0.0 5.2e-11 42.9 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system RHH_1 PF01402.21 gi|121636581|ref|YP_976804.1| - 5.4e-05 23.0 1.3 0.00011 22.0 1.3 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family PSK_trans_fac PF07704.11 gi|121636581|ref|YP_976804.1| - 0.014 16.1 1.1 0.016 16.0 1.1 1.1 1 0 0 1 1 1 0 Rv0623-like transcription factor PIN PF01850.21 gi|121636582|ref|YP_976805.1| - 4.3e-12 46.6 0.3 4.9e-12 46.4 0.3 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|121636582|ref|YP_976805.1| - 0.00017 22.3 2.7 0.00029 21.6 2.7 1.4 1 1 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|121636583|ref|YP_976806.1| - 0.016 15.2 3.9 0.056 13.4 0.4 2.3 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family PSK_trans_fac PF07704.11 gi|121636583|ref|YP_976806.1| - 0.055 14.2 1.4 0.099 13.4 1.4 1.5 1 1 0 1 1 1 0 Rv0623-like transcription factor SMC_ScpB PF04079.16 gi|121636583|ref|YP_976806.1| - 0.15 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB Acetyltransf_7 PF13508.7 gi|121636583|ref|YP_976806.1| - 0.16 12.4 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Sulfatase PF00884.23 gi|121636584|ref|YP_976807.1| - 1.5e-94 316.9 0.0 1.9e-94 316.5 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Laminin_G_3 PF13385.6 gi|121636584|ref|YP_976807.1| - 7.4e-06 26.2 0.0 2.1e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily DUF4994 PF16385.5 gi|121636584|ref|YP_976807.1| - 0.012 15.5 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function PIN PF01850.21 gi|121636586|ref|YP_976809.1| - 1.8e-05 25.3 0.5 2.9e-05 24.6 0.5 1.3 1 0 0 1 1 1 1 PIN domain RNA_pol_Rpb2_6 PF00562.28 gi|121636588|ref|YP_976811.1| - 1.8e-156 521.2 0.0 6.8e-156 519.2 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_3 PF04565.16 gi|121636588|ref|YP_976811.1| - 1.6e-29 101.9 0.0 3.8e-29 100.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_45 PF10385.9 gi|121636588|ref|YP_976811.1| - 8.1e-29 99.7 2.4 1.1e-27 96.0 3.2 2.5 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain RNA_pol_Rpb2_2 PF04561.14 gi|121636588|ref|YP_976811.1| - 5.8e-27 94.6 0.0 1.5e-26 93.2 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|121636588|ref|YP_976811.1| - 2.5e-26 91.9 0.0 6.7e-26 90.5 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_1 PF04563.15 gi|121636588|ref|YP_976811.1| - 9e-22 77.6 0.0 2.6e-21 76.1 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit Peptidase_M23 PF01551.22 gi|121636588|ref|YP_976811.1| - 0.17 12.1 0.5 1.1 9.6 0.0 2.5 3 0 0 3 3 3 0 Peptidase family M23 RNA_pol_Rpb1_1 PF04997.12 gi|121636589|ref|YP_976812.1| - 1.6e-82 277.3 0.0 2.6e-82 276.7 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 gi|121636589|ref|YP_976812.1| - 3.7e-64 216.7 0.2 8e-64 215.6 0.2 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 gi|121636589|ref|YP_976812.1| - 2.6e-38 131.9 0.0 1.7e-35 122.7 0.0 2.5 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|121636589|ref|YP_976812.1| - 1.8e-27 96.2 0.0 4.7e-27 94.9 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|121636589|ref|YP_976812.1| - 2.3e-08 33.9 0.0 6.6e-08 32.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 ApbA_C PF08546.11 gi|121636589|ref|YP_976812.1| - 0.076 13.2 0.0 1.4 9.1 0.0 2.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA C terminal Ceramidase_alk PF04734.13 gi|121636590|ref|YP_976813.1| - 2.5e-148 494.9 0.0 7.2e-147 490.1 0.0 2.0 1 1 0 1 1 1 1 Neutral/alkaline non-lysosomal ceramidase, N-terminal Ceramidse_alk_C PF17048.5 gi|121636590|ref|YP_976813.1| - 3.8e-37 127.8 0.0 7e-37 126.9 0.0 1.4 1 0 0 1 1 1 1 Neutral/alkaline non-lysosomal ceramidase, C-terminal AP_endonuc_2 PF01261.24 gi|121636591|ref|YP_976814.1| - 3.7e-34 118.0 1.9 4.4e-34 117.8 1.9 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel BKACE PF05853.12 gi|121636591|ref|YP_976814.1| - 0.057 12.7 0.2 0.086 12.1 0.2 1.3 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme Esterase_phd PF10503.9 gi|121636592|ref|YP_976815.1| - 3.4e-18 66.0 0.3 5.3e-18 65.3 0.3 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Abhydrolase_2 PF02230.16 gi|121636592|ref|YP_976815.1| - 0.0049 16.7 0.1 0.014 15.2 0.1 1.7 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 gi|121636592|ref|YP_976815.1| - 0.0049 16.4 0.4 0.012 15.2 0.2 1.7 2 0 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 gi|121636592|ref|YP_976815.1| - 0.2 11.5 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 alpha/beta hydrolase fold AidB_N PF18158.1 gi|121636593|ref|YP_976816.1| - 1.4e-51 174.5 2.8 1.9e-51 174.1 0.2 2.4 3 0 0 3 3 3 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121636593|ref|YP_976816.1| - 1.3e-28 100.1 4.7 2.4e-28 99.2 4.7 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636593|ref|YP_976816.1| - 1.7e-15 57.0 0.0 3.4e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636593|ref|YP_976816.1| - 2.3e-09 37.6 2.7 4.5e-09 36.7 2.7 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain ECH_1 PF00378.20 gi|121636594|ref|YP_976817.1| - 9.6e-31 107.0 0.0 4.1e-18 65.6 0.1 2.1 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636594|ref|YP_976817.1| - 1.3e-16 61.0 0.0 5.9e-16 58.9 0.0 1.8 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase SDH_sah PF01972.16 gi|121636594|ref|YP_976817.1| - 0.0051 15.8 0.1 0.0091 15.0 0.1 1.3 1 0 0 1 1 1 1 Serine dehydrogenase proteinase ACP_syn_III_C PF08541.10 gi|121636594|ref|YP_976817.1| - 0.012 15.7 0.0 0.068 13.3 0.0 2.1 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DUF3756 PF12581.8 gi|121636594|ref|YP_976817.1| - 0.28 11.1 1.6 0.38 10.7 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3756) PaaX PF07848.12 gi|121636595|ref|YP_976818.1| - 7.9e-17 61.2 0.3 1.7e-16 60.2 0.3 1.6 1 0 0 1 1 1 1 PaaX-like protein PaaX_C PF08223.11 gi|121636595|ref|YP_976818.1| - 1.6e-07 31.5 0.2 4.2e-07 30.2 0.2 1.8 1 1 0 1 1 1 1 PaaX-like protein C-terminal domain MLTR_LBD PF17765.1 gi|121636595|ref|YP_976818.1| - 0.0012 19.0 6.1 0.0012 19.0 6.1 2.2 2 1 0 2 2 2 1 MmyB-like transcription regulator ligand binding domain DUF5457 PF17540.2 gi|121636595|ref|YP_976818.1| - 0.013 15.6 0.0 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5457) ECH_1 PF00378.20 gi|121636596|ref|YP_976819.1| - 3.6e-42 144.4 0.0 4.5e-42 144.1 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636596|ref|YP_976819.1| - 4.5e-20 72.4 0.1 2.3e-19 70.1 0.1 1.9 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|121636596|ref|YP_976819.1| - 0.055 13.4 0.1 1 9.3 0.0 2.1 2 0 0 2 2 2 0 Peptidase family S49 MMPL PF03176.15 gi|121636597|ref|YP_976820.1| - 3.1e-223 739.7 38.0 4.8e-114 380.7 12.7 2.7 3 0 0 3 3 3 2 MMPL family LRR_9 PF14580.6 gi|121636597|ref|YP_976820.1| - 0.04 13.4 0.0 0.092 12.2 0.0 1.6 1 0 0 1 1 1 0 Leucine-rich repeat DUF1664 PF07889.12 gi|121636597|ref|YP_976820.1| - 0.65 10.0 6.0 4 7.5 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Hrs_helical PF12210.8 gi|121636597|ref|YP_976820.1| - 3.6 8.2 7.7 1.1 9.8 1.7 2.3 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate WBS28 PF15164.6 gi|121636597|ref|YP_976820.1| - 5.7 6.1 9.6 7.8 5.7 4.9 2.6 2 0 0 2 2 2 0 Williams-Beuren syndrome chromosomal region 28 protein homologue Mer2 PF09074.10 gi|121636597|ref|YP_976820.1| - 7.1 6.4 8.5 0.74 9.6 1.7 2.1 2 0 0 2 2 2 0 Mer2 Mycobact_memb PF05423.13 gi|121636598|ref|YP_976821.1| - 1.4e-64 216.2 0.0 1.6e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Mycobacterium membrane protein MarR PF01047.22 gi|121636599|ref|YP_976822.1| - 0.0025 17.7 0.0 0.0045 16.9 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|121636599|ref|YP_976822.1| - 0.0045 16.9 1.6 0.011 15.6 0.4 2.0 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 gi|121636599|ref|YP_976822.1| - 0.018 15.2 0.0 0.026 14.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|121636599|ref|YP_976822.1| - 0.071 13.2 0.8 0.18 11.9 0.1 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain DUF3060 PF11259.8 gi|121636600|ref|YP_976823.1| - 1.2e-21 76.1 5.2 2.1e-21 75.4 5.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3060) DUF5061 PF16587.5 gi|121636600|ref|YP_976823.1| - 3.1 7.9 7.2 6.2 6.9 7.2 1.5 1 1 0 1 1 1 0 17 kDa common-antigen outer membrane protein DUF3060 PF11259.8 gi|121636601|ref|YP_976824.1| - 9.7e-22 76.4 1.0 9.7e-22 76.4 1.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3060) TetR_C_33 PF13305.6 gi|121636602|ref|YP_976825.1| - 2.9e-18 66.5 2.7 4.6e-18 65.9 2.7 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121636602|ref|YP_976825.1| - 4.3e-05 23.2 0.0 7.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 gi|121636602|ref|YP_976825.1| - 0.078 13.2 3.7 0.72 10.1 0.5 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Ribosom_S12_S23 PF00164.25 gi|121636603|ref|YP_976826.1| - 2e-42 143.4 3.1 2.3e-42 143.2 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|121636604|ref|YP_976827.1| - 3.6e-62 208.4 0.1 4e-62 208.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Mak_N_cap PF18085.1 gi|121636604|ref|YP_976827.1| - 0.057 14.5 0.0 0.21 12.6 0.0 1.8 2 0 0 2 2 2 0 Maltokinase N-terminal cap domain GTP_EFTU PF00009.27 gi|121636605|ref|YP_976828.1| - 6.4e-68 228.1 0.0 1e-67 227.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|121636605|ref|YP_976828.1| - 1.4e-45 153.9 0.1 2.8e-45 153.0 0.1 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|121636605|ref|YP_976828.1| - 6.6e-34 115.8 0.2 1.4e-33 114.8 0.2 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|121636605|ref|YP_976828.1| - 1.7e-30 104.9 0.1 4.5e-30 103.5 0.1 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|121636605|ref|YP_976828.1| - 4.2e-14 52.7 0.1 1.1e-13 51.4 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 gi|121636605|ref|YP_976828.1| - 5.1e-07 29.6 0.1 1.1e-06 28.4 0.1 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 gi|121636605|ref|YP_976828.1| - 0.00042 20.4 0.0 0.00088 19.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 gi|121636605|ref|YP_976828.1| - 0.014 14.7 0.0 0.026 13.8 0.0 1.4 1 0 0 1 1 1 0 AIG1 family GTP_EFTU_D4 PF14578.6 gi|121636605|ref|YP_976828.1| - 0.037 13.9 0.0 0.098 12.6 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 4 ATP-grasp_4 PF13535.6 gi|121636605|ref|YP_976828.1| - 0.098 12.3 0.1 0.28 10.7 0.1 1.9 1 0 0 1 1 1 0 ATP-grasp domain GTP_EFTU PF00009.27 gi|121636606|ref|YP_976829.1| - 1.8e-58 197.3 0.4 2.4e-58 196.9 0.4 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|121636606|ref|YP_976829.1| - 1.7e-32 112.0 0.0 3.7e-32 111.0 0.0 1.6 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|121636606|ref|YP_976829.1| - 3.3e-17 62.6 6.0 1.1e-16 61.0 6.0 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|121636606|ref|YP_976829.1| - 6.3e-06 26.3 1.1 2.2e-05 24.5 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|121636606|ref|YP_976829.1| - 0.1 12.5 0.0 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase cobW PF02492.19 gi|121636606|ref|YP_976829.1| - 0.17 11.5 0.6 0.32 10.6 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SHOCT PF09851.9 gi|121636607|ref|YP_976830.1| - 3.1e-05 23.6 0.2 6.1e-05 22.6 0.2 1.5 1 0 0 1 1 1 1 Short C-terminal domain Epiglycanin_TR PF05647.11 gi|121636607|ref|YP_976830.1| - 0.13 12.2 0.3 0.3 11.0 0.3 1.5 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like DUF4133 PF13571.6 gi|121636607|ref|YP_976830.1| - 0.22 11.9 4.4 0.42 11.0 4.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) DUF2207 PF09972.9 gi|121636607|ref|YP_976830.1| - 2.3 6.9 4.6 3.3 6.4 4.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) adh_short_C2 PF13561.6 gi|121636608|ref|YP_976831.1| - 9.5e-50 169.3 0.1 1.1e-48 165.9 0.1 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121636608|ref|YP_976831.1| - 9.8e-47 158.9 0.1 8.1e-46 155.9 0.1 1.9 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121636608|ref|YP_976831.1| - 1.2e-15 57.9 0.1 1.6e-15 57.4 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121636608|ref|YP_976831.1| - 0.019 14.4 0.1 0.076 12.5 0.1 2.0 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Pyr_redox_2 PF07992.14 gi|121636609|ref|YP_976832.1| - 1.3e-60 205.2 0.7 1.3e-60 205.2 0.7 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121636609|ref|YP_976832.1| - 3.7e-19 69.1 15.2 4.4e-19 68.8 0.8 3.5 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 gi|121636609|ref|YP_976832.1| - 9.4e-13 48.5 0.0 2.6e-12 47.1 0.0 1.8 1 0 0 1 1 1 1 Reductase C-terminal K_oxygenase PF13434.6 gi|121636609|ref|YP_976832.1| - 1.5e-05 24.3 0.1 0.18 10.9 0.0 2.6 2 1 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 gi|121636609|ref|YP_976832.1| - 1.7e-05 24.9 8.2 0.043 14.0 0.1 3.6 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|121636609|ref|YP_976832.1| - 4.6e-05 22.8 0.0 0.00033 20.0 0.0 2.2 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|121636609|ref|YP_976832.1| - 0.00013 22.0 10.4 0.55 10.2 0.4 4.5 3 1 1 4 4 4 2 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|121636609|ref|YP_976832.1| - 0.00027 21.4 6.1 0.036 14.5 0.0 3.0 3 1 0 3 3 3 2 Putative NAD(P)-binding Amino_oxidase PF01593.24 gi|121636609|ref|YP_976832.1| - 0.00033 20.1 3.6 0.0014 18.0 1.2 2.2 1 1 0 2 2 2 1 Flavin containing amine oxidoreductase 2-Hacid_dh_C PF02826.19 gi|121636609|ref|YP_976832.1| - 0.0021 17.5 0.4 0.011 15.1 0.0 2.2 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|121636609|ref|YP_976832.1| - 0.0028 17.9 0.6 0.23 11.7 0.1 2.5 2 0 0 2 2 2 1 TrkA-N domain Lycopene_cycl PF05834.12 gi|121636609|ref|YP_976832.1| - 0.0048 16.0 13.4 0.027 13.5 0.7 3.4 3 1 1 4 4 4 2 Lycopene cyclase protein DAO PF01266.24 gi|121636609|ref|YP_976832.1| - 0.0088 15.7 1.1 0.0088 15.7 1.1 4.1 5 0 0 5 5 4 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|121636609|ref|YP_976832.1| - 0.027 14.3 0.2 0.027 14.3 0.2 2.4 3 0 0 3 3 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 gi|121636609|ref|YP_976832.1| - 0.03 13.4 0.6 0.03 13.4 0.6 4.1 4 1 1 5 5 4 0 Glucose inhibited division protein A ApbA PF02558.16 gi|121636609|ref|YP_976832.1| - 0.055 13.1 0.3 0.14 11.8 0.3 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|121636609|ref|YP_976832.1| - 0.061 12.7 0.4 0.061 12.7 0.4 1.8 3 0 0 3 3 3 0 ThiF family Shikimate_DH PF01488.20 gi|121636609|ref|YP_976832.1| - 0.095 12.8 0.2 1.5 8.9 0.1 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase FLgD_tudor PF13861.6 gi|121636609|ref|YP_976832.1| - 1.5 9.1 5.6 3.6 7.9 2.0 2.5 2 0 0 2 2 2 0 FlgD Tudor-like domain Glyoxalase_6 PF18029.1 gi|121636610|ref|YP_976833.1| - 0.0075 17.1 0.7 0.0089 16.8 0.7 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain DUF2332 PF10094.9 gi|121636611|ref|YP_976834.1| - 1.6e-111 373.0 4.0 1.8e-111 372.8 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2332) TetR_C_14 PF17754.1 gi|121636612|ref|YP_976835.1| - 2.2e-43 146.8 0.9 3.4e-43 146.1 0.9 1.3 1 0 0 1 1 1 1 MftR C-terminal domain TetR_N PF00440.23 gi|121636612|ref|YP_976835.1| - 1.4e-13 50.4 0.5 2.4e-13 49.6 0.5 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|121636612|ref|YP_976835.1| - 0.00095 19.3 0.1 0.0035 17.5 0.0 1.9 3 0 0 3 3 3 1 Helix-turn-helix of insertion element transposase HTH_23 PF13384.6 gi|121636612|ref|YP_976835.1| - 0.0075 16.0 0.6 0.14 12.0 0.0 2.8 3 0 0 3 3 3 1 Homeodomain-like domain HTH_7 PF02796.15 gi|121636612|ref|YP_976835.1| - 0.012 15.6 0.1 0.067 13.3 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Radical_SAM PF04055.21 gi|121636614|ref|YP_976837.1| - 1.2e-23 84.4 0.0 1.6e-23 83.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121636614|ref|YP_976837.1| - 1.9e-05 24.9 0.0 3.2e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|121636614|ref|YP_976837.1| - 2.4e-05 24.7 0.4 4.9e-05 23.8 0.4 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|121636614|ref|YP_976837.1| - 0.00014 22.0 0.0 0.00024 21.2 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain NIR_SIR_ferr PF03460.17 gi|121636614|ref|YP_976837.1| - 0.076 12.9 0.2 0.82 9.6 0.1 2.5 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain FMN_dh PF01070.18 gi|121636615|ref|YP_976838.1| - 4e-108 361.5 0.1 4.7e-108 361.3 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|121636615|ref|YP_976838.1| - 2.7e-07 29.9 1.9 1.1e-06 27.9 1.3 2.0 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|121636615|ref|YP_976838.1| - 3.5e-06 26.4 0.3 4.9e-06 25.9 0.3 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase ThiG PF05690.14 gi|121636615|ref|YP_976838.1| - 0.0092 15.3 0.8 0.024 14.0 0.8 1.7 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|121636615|ref|YP_976838.1| - 0.012 15.1 1.0 0.094 12.2 0.2 2.3 1 1 1 2 2 2 0 Histidine biosynthesis protein NMO PF03060.15 gi|121636615|ref|YP_976838.1| - 0.017 14.5 2.9 0.029 13.8 2.9 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase Dus PF01207.17 gi|121636615|ref|YP_976838.1| - 0.025 13.7 0.3 0.043 12.9 0.3 1.3 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|121636615|ref|YP_976838.1| - 0.051 12.8 0.5 0.12 11.6 0.3 1.6 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase G3P_antiterm PF04309.12 gi|121636615|ref|YP_976838.1| - 0.12 11.8 0.0 12 5.3 0.0 2.6 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator PA PF02225.22 gi|121636615|ref|YP_976838.1| - 0.99 9.5 8.0 0.14 12.2 0.4 3.0 2 2 0 3 3 3 0 PA domain Creatininase PF02633.14 gi|121636616|ref|YP_976839.1| - 3e-59 200.4 0.4 3.6e-59 200.2 0.4 1.1 1 0 0 1 1 1 1 Creatinine amidohydrolase Glycos_transf_2 PF00535.26 gi|121636617|ref|YP_976840.1| - 1e-25 90.5 0.0 1.5e-25 89.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121636617|ref|YP_976840.1| - 8.7e-14 51.9 0.2 1.4e-13 51.3 0.2 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|121636617|ref|YP_976840.1| - 2.8e-13 50.0 0.0 4.7e-13 49.2 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|121636617|ref|YP_976840.1| - 4.2e-11 43.1 0.9 6.8e-11 42.4 0.9 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|121636617|ref|YP_976840.1| - 6.5e-09 35.5 0.0 1.4e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_transf_7C PF02709.14 gi|121636617|ref|YP_976840.1| - 0.056 13.1 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain of galactosyltransferase Glyco_transf_49 PF13896.6 gi|121636617|ref|YP_976840.1| - 0.24 10.7 0.0 0.37 10.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl-transferase for dystroglycan GMC_oxred_N PF00732.19 gi|121636618|ref|YP_976841.1| - 7.7e-55 186.3 0.0 1e-54 186.0 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 gi|121636618|ref|YP_976841.1| - 7.7e-30 104.3 0.7 8.2e-29 101.0 0.7 2.1 1 1 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|121636618|ref|YP_976841.1| - 2.2e-06 27.5 3.9 6.2e-05 22.7 3.9 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121636618|ref|YP_976841.1| - 0.002 18.3 0.7 0.0053 17.0 0.3 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|121636618|ref|YP_976841.1| - 0.0054 15.8 0.9 0.0081 15.3 0.9 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|121636618|ref|YP_976841.1| - 0.0074 15.6 0.3 0.2 10.8 0.1 2.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121636618|ref|YP_976841.1| - 0.08 12.2 0.3 0.15 11.3 0.3 1.4 1 0 0 1 1 1 0 Thi4 family Ribosomal_S10 PF00338.22 gi|121636622|ref|YP_976845.1| - 2.7e-34 117.3 0.1 3e-34 117.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e DUF384 PF04064.13 gi|121636622|ref|YP_976845.1| - 0.047 13.6 0.1 0.093 12.6 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF384) Ribosomal_L3 PF00297.22 gi|121636623|ref|YP_976846.1| - 1.6e-19 70.1 6.7 9e-18 64.4 4.4 2.9 2 1 0 2 2 2 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|121636624|ref|YP_976847.1| - 8.1e-65 218.1 0.2 1e-64 217.8 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|121636625|ref|YP_976848.1| - 5.2e-31 106.9 0.1 5.7e-31 106.7 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 gi|121636626|ref|YP_976849.1| - 6.1e-55 184.8 3.0 1.2e-54 183.9 3.0 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|121636626|ref|YP_976849.1| - 4.2e-34 116.4 1.3 8.6e-34 115.3 1.3 1.6 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|121636627|ref|YP_976850.1| - 5.7e-37 125.5 0.6 6.5e-37 125.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L22 PF00237.19 gi|121636628|ref|YP_976851.1| - 5.7e-31 106.8 0.1 1.1e-30 105.9 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|121636629|ref|YP_976852.1| - 5.9e-37 126.1 0.2 1.2e-36 125.1 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|121636629|ref|YP_976852.1| - 8.4e-19 67.2 0.6 1.4e-18 66.5 0.6 1.4 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|121636629|ref|YP_976852.1| - 0.00014 21.7 0.3 0.00032 20.5 0.3 1.6 1 0 0 1 1 1 1 KH domain Ribosomal_L16 PF00252.18 gi|121636630|ref|YP_976853.1| - 1.2e-46 158.0 0.3 1.3e-46 157.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_L29 PF00831.23 gi|121636631|ref|YP_976854.1| - 1.9e-24 85.4 5.8 2.2e-24 85.2 5.8 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein TRIF-NTD PF17798.1 gi|121636631|ref|YP_976854.1| - 0.019 15.1 0.0 0.022 14.9 0.0 1.0 1 0 0 1 1 1 0 TRIF N-terminal domain CCDC85 PF10226.9 gi|121636631|ref|YP_976854.1| - 0.031 14.0 1.2 0.035 13.8 1.2 1.1 1 0 0 1 1 1 0 CCDC85 family Mrr_N PF14338.6 gi|121636631|ref|YP_976854.1| - 0.054 13.6 0.2 0.082 13.1 0.2 1.3 1 1 0 1 1 1 0 Mrr N-terminal domain LEM PF03020.15 gi|121636631|ref|YP_976854.1| - 0.13 11.9 1.1 0.13 11.9 1.1 2.0 3 0 0 3 3 3 0 LEM domain Ribosomal_S17 PF00366.20 gi|121636632|ref|YP_976855.1| - 7.3e-29 99.7 0.3 1e-28 99.2 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 Sulfatase PF00884.23 gi|121636633|ref|YP_976856.1| - 1.4e-97 326.9 0.0 1.9e-97 326.4 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|121636633|ref|YP_976856.1| - 0.0058 16.3 0.0 0.076 12.6 0.0 2.1 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Laminin_G_2 PF02210.24 gi|121636633|ref|YP_976856.1| - 0.022 15.3 0.0 0.045 14.3 0.0 1.5 1 0 0 1 1 1 0 Laminin G domain DUF229 PF02995.17 gi|121636633|ref|YP_976856.1| - 0.11 11.0 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF229) DUF4994 PF16385.5 gi|121636633|ref|YP_976856.1| - 0.15 12.0 0.0 0.33 10.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function FGE-sulfatase PF03781.16 gi|121636634|ref|YP_976857.1| - 1.3e-90 303.5 0.9 1.4e-90 303.4 0.9 1.0 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF4436 PF14494.6 gi|121636635|ref|YP_976858.1| - 4.4e-105 350.6 3.4 4.4e-105 350.6 3.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4436) Ribosomal_L14 PF00238.19 gi|121636636|ref|YP_976859.1| - 5.9e-55 184.6 0.3 6.5e-55 184.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DUF730 PF05325.11 gi|121636636|ref|YP_976859.1| - 0.14 12.2 0.2 0.56 10.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF730) ribosomal_L24 PF17136.4 gi|121636637|ref|YP_976860.1| - 9.4e-24 83.6 2.0 1.3e-23 83.1 2.0 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 gi|121636637|ref|YP_976860.1| - 3.7e-11 42.6 0.3 3.7e-11 42.6 0.3 2.4 2 1 1 3 3 3 1 KOW motif Ribosomal_L5_C PF00673.21 gi|121636638|ref|YP_976861.1| - 9.2e-38 128.3 0.0 1.4e-37 127.7 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|121636638|ref|YP_976861.1| - 1.9e-26 92.1 0.7 3.3e-26 91.4 0.7 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 DNA_pol3_alpha PF07733.12 gi|121636638|ref|YP_976861.1| - 0.014 15.0 0.1 0.018 14.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha NTPase domain Ribosomal_S14 PF00253.21 gi|121636639|ref|YP_976862.1| - 7.1e-25 86.5 3.3 8.1e-25 86.4 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Sgf11 PF08209.11 gi|121636639|ref|YP_976862.1| - 0.015 14.8 2.1 2.4 7.8 0.4 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Fer2_4 PF13510.6 gi|121636639|ref|YP_976862.1| - 0.042 13.9 0.6 0.05 13.6 0.6 1.2 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Ribosomal_S8 PF00410.19 gi|121636640|ref|YP_976863.1| - 1e-49 167.7 0.0 1.1e-49 167.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|121636641|ref|YP_976864.1| - 9.4e-41 138.4 1.6 7.9e-22 77.7 0.0 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_L18p PF00861.22 gi|121636642|ref|YP_976865.1| - 2e-47 160.4 3.3 2.2e-47 160.2 3.3 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPD30 PF18850.1 gi|121636642|ref|YP_976865.1| - 0.064 13.0 0.1 0.093 12.5 0.1 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 Ribosomal_S5 PF00333.20 gi|121636643|ref|YP_976866.1| - 1.7e-28 98.4 2.3 3e-28 97.6 2.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|121636643|ref|YP_976866.1| - 2.2e-28 97.5 0.6 3.3e-28 96.9 0.6 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|121636644|ref|YP_976867.1| - 1.8e-18 66.1 0.5 2.1e-18 65.9 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|121636645|ref|YP_976868.1| - 5.6e-33 114.3 2.4 7.4e-33 114.0 2.4 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|121636645|ref|YP_976868.1| - 0.017 14.6 0.1 0.034 13.6 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Peptidase_S49 PF01343.18 gi|121636646|ref|YP_976869.1| - 1.5e-101 336.7 0.1 1.8e-51 174.1 0.0 2.1 2 0 0 2 2 2 2 Peptidase family S49 CLP_protease PF00574.23 gi|121636646|ref|YP_976869.1| - 1e-06 28.7 1.3 0.0013 18.6 0.2 3.2 3 0 0 3 3 3 2 Clp protease PRODH PF18327.1 gi|121636646|ref|YP_976869.1| - 0.032 14.4 3.6 0.12 12.6 3.6 2.1 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain SDH_sah PF01972.16 gi|121636646|ref|YP_976869.1| - 0.099 11.6 0.4 0.16 11.0 0.4 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase ECH_1 PF00378.20 gi|121636646|ref|YP_976869.1| - 0.19 11.0 2.0 2.7 7.3 0.4 3.1 2 2 2 4 4 4 0 Enoyl-CoA hydratase/isomerase LCM PF04072.14 gi|121636647|ref|YP_976870.1| - 2e-62 210.5 0.0 2.7e-62 210.1 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Phage_base_V PF04717.12 gi|121636647|ref|YP_976870.1| - 0.035 14.0 0.5 0.071 13.0 0.5 1.5 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector LCM PF04072.14 gi|121636648|ref|YP_976871.1| - 2e-67 226.8 0.9 2.9e-67 226.2 0.9 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Aldolase_II PF00596.21 gi|121636649|ref|YP_976872.1| - 3.3e-45 154.3 0.3 3.8e-45 154.1 0.3 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain 2-Hacid_dh_C PF02826.19 gi|121636650|ref|YP_976873.1| - 3.7e-52 176.3 0.0 5.9e-52 175.6 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|121636650|ref|YP_976873.1| - 4.6e-11 42.5 0.0 5.6e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FGGY_C PF02782.16 gi|121636651|ref|YP_976874.1| - 1.3e-22 80.5 0.4 1.3e-22 80.5 0.4 1.7 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 gi|121636651|ref|YP_976874.1| - 1.2e-10 41.4 0.0 1.5e-09 37.8 0.0 2.1 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain BcrAD_BadFG PF01869.20 gi|121636651|ref|YP_976874.1| - 0.0014 18.2 0.0 0.0022 17.5 0.0 1.4 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family RHS_repeat PF05593.14 gi|121636651|ref|YP_976874.1| - 0.23 12.0 1.1 13 6.4 0.0 3.5 3 0 0 3 3 3 0 RHS Repeat CtnDOT_TraJ PF07863.11 gi|121636651|ref|YP_976874.1| - 0.6 10.8 2.7 23 5.7 0.4 2.9 2 0 0 2 2 2 0 Homologues of TraJ from Bacteroides conjugative transposon Acetyltransf_3 PF13302.7 gi|121636652|ref|YP_976875.1| - 1.9e-07 31.8 0.4 7e-07 30.0 0.0 2.0 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121636652|ref|YP_976875.1| - 1.6e-05 25.2 0.0 6.9e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121636652|ref|YP_976875.1| - 3.3e-05 24.1 0.3 0.00015 22.0 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family DNA_topoisoIV PF00521.20 gi|121636652|ref|YP_976875.1| - 0.00068 18.6 0.3 0.00094 18.2 0.3 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A Acetyltransf_13 PF13880.6 gi|121636652|ref|YP_976875.1| - 0.0035 17.3 0.3 0.19 11.7 0.0 2.6 2 1 1 3 3 3 1 ESCO1/2 acetyl-transferase Acetyltransf_10 PF13673.7 gi|121636652|ref|YP_976875.1| - 0.0059 16.6 0.1 0.065 13.2 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.6 gi|121636652|ref|YP_976875.1| - 0.1 12.0 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 LCM PF04072.14 gi|121636653|ref|YP_976876.1| - 1.5e-65 220.7 1.2 2e-65 220.3 1.2 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase DUF2785 PF10978.8 gi|121636653|ref|YP_976876.1| - 0.092 12.5 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) SecY PF00344.20 gi|121636654|ref|YP_976877.1| - 4.3e-112 374.3 18.6 5.1e-112 374.1 18.6 1.1 1 0 0 1 1 1 1 SecY translocase ADK PF00406.22 gi|121636655|ref|YP_976878.1| - 2.1e-53 180.5 0.0 2.5e-53 180.2 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|121636655|ref|YP_976878.1| - 7.7e-28 97.6 0.0 9.6e-28 97.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|121636655|ref|YP_976878.1| - 6.9e-10 39.2 0.0 8.9e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|121636655|ref|YP_976878.1| - 6.8e-08 33.1 0.0 1e-07 32.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|121636655|ref|YP_976878.1| - 0.00022 21.0 0.2 0.00054 19.8 0.0 1.7 2 0 0 2 2 2 1 Cytidylate kinase Thymidylate_kin PF02223.17 gi|121636655|ref|YP_976878.1| - 0.0015 18.2 0.1 1.5 8.5 0.0 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_28 PF13521.6 gi|121636655|ref|YP_976878.1| - 0.0018 18.5 0.0 0.0038 17.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121636655|ref|YP_976878.1| - 0.0085 16.5 0.0 0.016 15.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IPT PF01745.16 gi|121636655|ref|YP_976878.1| - 0.043 13.2 0.0 0.32 10.3 0.0 2.2 1 1 1 2 2 2 0 Isopentenyl transferase RuvB_N PF05496.12 gi|121636655|ref|YP_976878.1| - 0.055 13.2 0.0 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Hydin_ADK PF17213.3 gi|121636655|ref|YP_976878.1| - 0.056 13.7 0.0 3.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_5 PF07728.14 gi|121636655|ref|YP_976878.1| - 0.11 12.5 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Peptidase_M24 PF00557.24 gi|121636656|ref|YP_976879.1| - 4.8e-40 137.5 0.2 5.5e-40 137.3 0.2 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 PT-VENN PF04829.13 gi|121636656|ref|YP_976879.1| - 0.088 12.9 1.0 0.088 12.9 1.0 2.4 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif Sigma70_r2 PF04542.14 gi|121636657|ref|YP_976880.1| - 4.5e-18 64.8 2.6 7.9e-18 64.0 2.6 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121636657|ref|YP_976880.1| - 1.3e-14 53.4 0.2 3.5e-14 52.0 0.1 1.8 1 1 1 2 2 2 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|121636657|ref|YP_976880.1| - 7.8e-13 47.9 0.2 1.8e-12 46.7 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121636657|ref|YP_976880.1| - 1.5e-05 25.0 1.0 2.7e-05 24.2 1.0 1.5 1 1 0 1 1 1 1 ECF sigma factor HTH_38 PF13936.6 gi|121636657|ref|YP_976880.1| - 4.8e-05 23.0 0.1 0.00013 21.7 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121636657|ref|YP_976880.1| - 0.00028 20.6 0.9 0.00028 20.6 0.9 2.5 2 1 0 2 2 2 1 Homeodomain-like domain Phage_antitermQ PF06530.12 gi|121636657|ref|YP_976880.1| - 0.00067 19.6 0.0 0.0012 18.7 0.0 1.5 2 0 0 2 2 2 1 Phage antitermination protein Q GerE PF00196.19 gi|121636657|ref|YP_976880.1| - 0.0014 18.1 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Terminase_5 PF06056.12 gi|121636657|ref|YP_976880.1| - 0.0019 18.0 0.0 0.0044 16.9 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) PaaA_PaaC PF05138.12 gi|121636657|ref|YP_976880.1| - 0.022 13.9 0.2 0.032 13.4 0.2 1.4 1 1 0 1 1 1 0 Phenylacetic acid catabolic protein zf-HC2 PF13490.6 gi|121636658|ref|YP_976881.1| - 3.6e-10 39.9 2.3 3.6e-10 39.9 2.3 1.8 2 0 0 2 2 2 1 Putative zinc-finger MarR PF01047.22 gi|121636659|ref|YP_976882.1| - 3.3e-09 36.5 0.0 5.9e-09 35.7 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|121636659|ref|YP_976882.1| - 4.3e-08 32.9 0.3 8.1e-08 32.0 0.3 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|121636659|ref|YP_976882.1| - 6.5e-08 33.0 0.1 1.5e-07 31.8 0.1 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain GntR PF00392.21 gi|121636659|ref|YP_976882.1| - 0.0008 19.0 2.5 0.0018 17.9 0.0 2.5 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|121636659|ref|YP_976882.1| - 0.0017 18.5 0.0 0.0036 17.5 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 gi|121636659|ref|YP_976882.1| - 0.0086 16.1 0.2 0.015 15.4 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121636659|ref|YP_976882.1| - 0.014 15.2 3.4 0.33 10.8 0.2 3.0 3 0 0 3 3 3 0 IclR helix-turn-helix domain HTH_1 PF00126.27 gi|121636659|ref|YP_976882.1| - 0.032 14.2 0.2 0.071 13.1 0.2 1.7 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HxlR PF01638.17 gi|121636659|ref|YP_976882.1| - 0.034 14.0 0.0 0.051 13.4 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_24 PF13412.6 gi|121636659|ref|YP_976882.1| - 0.11 12.1 0.0 0.22 11.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_47 PF16221.5 gi|121636659|ref|YP_976882.1| - 0.15 11.6 0.0 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 winged helix-turn-helix HTH_23 PF13384.6 gi|121636659|ref|YP_976882.1| - 0.17 11.7 1.3 0.27 11.1 0.1 1.9 2 0 0 2 2 2 0 Homeodomain-like domain MDMPI_N PF11716.8 gi|121636660|ref|YP_976883.1| - 1.1e-12 48.9 9.5 1.4e-11 45.3 4.2 2.9 2 1 0 2 2 2 1 Mycothiol maleylpyruvate isomerase N-terminal domain DinB_2 PF12867.7 gi|121636660|ref|YP_976883.1| - 0.0022 18.5 2.7 0.0071 16.9 2.7 1.9 1 1 0 1 1 1 1 DinB superfamily DUF664 PF04978.12 gi|121636660|ref|YP_976883.1| - 0.11 13.0 0.0 18 5.7 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF664) DUF4226 PF10774.9 gi|121636661|ref|YP_976884.1| - 1.5e-28 99.3 3.9 1.9e-28 98.9 3.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4226) DDE_Tnp_ISL3 PF01610.17 gi|121636663|ref|YP_976886.1| - 1.6e-17 64.1 0.0 1.7e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 Transposase PE PF00934.20 gi|121636664|ref|YP_976887.1| - 4.7e-33 113.4 27.8 6.5e-33 112.9 27.8 1.2 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636664|ref|YP_976887.1| - 3.5 8.1 18.6 4.5 7.8 18.6 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm HTH_17 PF12728.7 gi|121636666|ref|YP_976889.1| - 4.3e-11 42.8 0.0 8.2e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|121636666|ref|YP_976889.1| - 0.026 14.4 0.1 0.051 13.4 0.1 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AbiEi_4 PF13338.6 gi|121636666|ref|YP_976889.1| - 0.077 13.2 0.0 0.2 11.9 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin PE PF00934.20 gi|121636668|ref|YP_976891.1| - 3.3e-29 101.0 24.6 7.1e-29 100.0 24.6 1.6 1 0 0 1 1 1 1 PE family Waikav_capsid_1 PF12264.8 gi|121636668|ref|YP_976891.1| - 4.5 6.7 4.9 6.9 6.1 4.9 1.1 1 0 0 1 1 1 0 Waikavirus capsid protein 1 PE PF00934.20 gi|121636669|ref|YP_976892.1| - 2e-32 111.4 21.6 3.1e-32 110.7 21.6 1.3 1 0 0 1 1 1 1 PE family RHH_1 PF01402.21 gi|121636670|ref|YP_976893.1| - 8.5e-06 25.5 2.2 1.4e-05 24.8 2.2 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family VapB_antitoxin PF09957.9 gi|121636670|ref|YP_976893.1| - 0.013 15.4 0.3 0.029 14.3 0.3 1.6 1 0 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB PSK_trans_fac PF07704.11 gi|121636670|ref|YP_976893.1| - 0.072 13.9 0.4 0.12 13.2 0.4 1.3 1 0 0 1 1 1 0 Rv0623-like transcription factor CcdA PF07362.12 gi|121636670|ref|YP_976893.1| - 0.13 12.7 0.9 0.42 11.1 0.2 2.1 2 1 0 2 2 2 0 Post-segregation antitoxin CcdA PIN PF01850.21 gi|121636671|ref|YP_976894.1| - 9.4e-13 48.7 0.0 1.1e-12 48.6 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121636671|ref|YP_976894.1| - 0.0066 16.2 0.1 0.016 15.0 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF5615) MyTH4 PF00784.17 gi|121636672|ref|YP_976895.1| - 0.07 13.6 0.0 0.073 13.6 0.0 1.1 1 0 0 1 1 1 0 MyTH4 domain NAD_binding_2 PF03446.15 gi|121636674|ref|YP_976897.1| - 1.5e-46 158.5 0.8 2.4e-46 157.8 0.8 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|121636674|ref|YP_976897.1| - 3.3e-35 121.0 0.6 6.7e-35 120.0 0.6 1.5 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 gi|121636674|ref|YP_976897.1| - 1e-07 32.4 0.3 4.1e-07 30.5 0.1 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|121636674|ref|YP_976897.1| - 7.6e-05 22.1 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|121636674|ref|YP_976897.1| - 0.00043 19.9 0.4 0.0009 18.9 0.0 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain PDH PF02153.17 gi|121636674|ref|YP_976897.1| - 0.00064 18.8 0.1 0.00091 18.3 0.1 1.2 1 0 0 1 1 1 1 Prephenate dehydrogenase 3HCDH_N PF02737.18 gi|121636674|ref|YP_976897.1| - 0.019 14.9 1.3 0.34 10.8 0.1 2.4 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acyl-CoA_dh_1 PF00441.24 gi|121636675|ref|YP_976898.1| - 2.7e-47 160.8 1.4 2.7e-47 160.8 1.4 1.5 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121636675|ref|YP_976898.1| - 4.1e-26 91.8 0.0 8.9e-26 90.8 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636675|ref|YP_976898.1| - 1.5e-24 86.0 0.0 2.8e-24 85.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636675|ref|YP_976898.1| - 1.5e-18 67.4 2.7 5.4e-18 65.6 0.4 2.2 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|121636675|ref|YP_976898.1| - 0.092 13.3 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal HpaB_N PF11794.8 gi|121636675|ref|YP_976898.1| - 0.13 11.9 0.1 0.33 10.6 0.1 1.6 1 1 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal Aldedh PF00171.22 gi|121636676|ref|YP_976899.1| - 6.1e-137 456.9 0.0 8.6e-137 456.4 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|121636676|ref|YP_976899.1| - 0.00033 19.8 0.0 0.00049 19.3 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) PE PF00934.20 gi|121636677|ref|YP_976900.1| - 1.2e-29 102.4 26.5 1.2e-29 102.4 26.5 2.6 3 0 0 3 3 3 1 PE family His_Phos_1 PF00300.22 gi|121636677|ref|YP_976900.1| - 6.2e-19 68.5 0.2 2.3e-18 66.6 0.0 2.0 3 0 0 3 3 3 1 Histidine phosphatase superfamily (branch 1) Pentapeptide_2 PF01469.18 gi|121636678|ref|YP_976901.1| - 1.1e-59 198.0 378.1 2.4e-09 36.9 27.1 13.4 9 3 2 13 13 13 13 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121636678|ref|YP_976901.1| - 4.4e-59 199.1 26.6 6.3e-59 198.6 26.6 1.2 1 0 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121636678|ref|YP_976901.1| - 1.1 9.6 8.1 1.4 9.2 3.9 2.5 2 0 0 2 2 2 0 Proteins of 100 residues with WXG HTH_23 PF13384.6 gi|121636679|ref|YP_976902.1| - 4.1e-14 51.9 0.2 4.8e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|121636679|ref|YP_976902.1| - 1.9e-13 50.3 0.2 2.3e-13 50.0 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|121636679|ref|YP_976902.1| - 4.9e-11 42.5 0.1 5.8e-11 42.3 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn helix LZ_Tnp_IS481 PF13011.6 gi|121636679|ref|YP_976902.1| - 2.3e-10 40.8 0.1 2.8e-10 40.6 0.1 1.1 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_Tnp_1 PF01527.20 gi|121636679|ref|YP_976902.1| - 4.1e-07 30.2 0.1 4.8e-07 30.0 0.1 1.0 1 0 0 1 1 1 1 Transposase HTH_7 PF02796.15 gi|121636679|ref|YP_976902.1| - 2.3e-06 27.6 0.0 2.8e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_1_2 PF13022.6 gi|121636679|ref|YP_976902.1| - 2.5e-05 24.4 0.1 2.6e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase Terminase_5 PF06056.12 gi|121636679|ref|YP_976902.1| - 9.7e-05 22.2 0.0 0.00014 21.7 0.0 1.4 1 1 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_ISL3 PF13542.6 gi|121636679|ref|YP_976902.1| - 0.00014 21.2 0.2 0.00019 20.8 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 MerR PF00376.23 gi|121636679|ref|YP_976902.1| - 0.00014 21.5 0.2 0.0005 19.8 0.2 1.9 1 1 0 1 1 1 1 MerR family regulatory protein HTH_40 PF14493.6 gi|121636679|ref|YP_976902.1| - 0.00027 21.3 0.0 0.00031 21.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|121636679|ref|YP_976902.1| - 0.00029 20.3 0.0 0.00038 19.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|121636679|ref|YP_976902.1| - 0.00047 20.0 0.1 0.00057 19.7 0.1 1.1 1 0 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.12 gi|121636679|ref|YP_976902.1| - 0.00048 19.7 0.1 0.00065 19.3 0.1 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 DUF1153 PF06627.11 gi|121636679|ref|YP_976902.1| - 0.00069 19.7 0.1 0.00083 19.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1153) HTH_3 PF01381.22 gi|121636679|ref|YP_976902.1| - 0.00082 19.4 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_psq PF05225.16 gi|121636679|ref|YP_976902.1| - 0.00094 18.9 0.1 0.0012 18.5 0.1 1.2 1 0 0 1 1 1 1 helix-turn-helix, Psq domain HTH_32 PF13565.6 gi|121636679|ref|YP_976902.1| - 0.001 19.6 0.3 0.0071 16.9 0.1 1.9 1 1 1 2 2 2 1 Homeodomain-like domain MerR_1 PF13411.6 gi|121636679|ref|YP_976902.1| - 0.0016 18.5 0.0 0.0021 18.1 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_17 PF12728.7 gi|121636679|ref|YP_976902.1| - 0.002 18.3 0.0 0.0027 17.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain GerE PF00196.19 gi|121636679|ref|YP_976902.1| - 0.002 17.6 0.0 0.0026 17.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_30 PF13556.6 gi|121636679|ref|YP_976902.1| - 0.0024 17.6 0.0 0.003 17.3 0.0 1.2 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain DUF1804 PF08822.11 gi|121636679|ref|YP_976902.1| - 0.004 17.2 0.0 0.0046 17.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1804) HTH_AraC PF00165.23 gi|121636679|ref|YP_976902.1| - 0.0045 17.1 0.0 0.0064 16.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_31 PF13560.6 gi|121636679|ref|YP_976902.1| - 0.005 17.2 0.3 0.0092 16.3 0.3 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|121636679|ref|YP_976902.1| - 0.0051 16.5 0.0 0.0068 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF746 PF05344.11 gi|121636679|ref|YP_976902.1| - 0.0051 16.6 0.0 0.0065 16.3 0.0 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF746) HTH_8 PF02954.19 gi|121636679|ref|YP_976902.1| - 0.01 15.6 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family GntR PF00392.21 gi|121636679|ref|YP_976902.1| - 0.01 15.5 0.1 0.012 15.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family YdaS_antitoxin PF15943.5 gi|121636679|ref|YP_976902.1| - 0.011 15.6 0.1 0.014 15.2 0.1 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_1 PF00126.27 gi|121636679|ref|YP_976902.1| - 0.015 15.3 0.1 0.02 14.9 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.12 gi|121636679|ref|YP_976902.1| - 0.017 15.1 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 HTH domain HTH_10 PF04967.12 gi|121636679|ref|YP_976902.1| - 0.017 14.9 0.0 0.033 14.0 0.0 1.5 1 1 0 1 1 1 0 HTH DNA binding domain DUF2802 PF10975.8 gi|121636679|ref|YP_976902.1| - 0.018 15.1 0.1 0.018 15.1 0.1 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF2802) UPF0175 PF03683.13 gi|121636679|ref|YP_976902.1| - 0.022 14.4 0.0 0.025 14.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) HTH_Tnp_IS630 PF01710.16 gi|121636679|ref|YP_976902.1| - 0.023 14.7 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Transposase UPF0122 PF04297.14 gi|121636679|ref|YP_976902.1| - 0.024 14.8 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like TetR_N PF00440.23 gi|121636679|ref|YP_976902.1| - 0.033 14.0 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.16 gi|121636679|ref|YP_976902.1| - 0.055 13.0 0.0 0.061 12.9 0.0 1.3 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_AsnC-type PF13404.6 gi|121636679|ref|YP_976902.1| - 0.063 13.1 0.0 0.095 12.5 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain GcrA PF07750.11 gi|121636679|ref|YP_976902.1| - 0.08 13.4 0.1 0.083 13.3 0.1 1.1 1 0 0 1 1 1 0 GcrA cell cycle regulator HTH_Crp_2 PF13545.6 gi|121636679|ref|YP_976902.1| - 0.097 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain KORA PF16509.5 gi|121636679|ref|YP_976902.1| - 0.11 12.7 0.1 0.13 12.6 0.1 1.1 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor LacI PF00356.21 gi|121636679|ref|YP_976902.1| - 0.11 12.3 0.1 0.74 9.7 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family TrmB PF01978.19 gi|121636679|ref|YP_976902.1| - 0.12 12.3 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_22 PF13309.6 gi|121636679|ref|YP_976902.1| - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 HTH domain DUF1492 PF07374.11 gi|121636679|ref|YP_976902.1| - 0.16 12.1 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) BAT PF15915.5 gi|121636680|ref|YP_976903.1| - 0.015 15.2 0.3 0.099 12.5 0.1 2.2 2 0 0 2 2 2 0 GAF and HTH_10 associated domain DASH_Dad2 PF08654.10 gi|121636680|ref|YP_976903.1| - 0.016 15.6 0.0 0.031 14.7 0.0 1.5 1 0 0 1 1 1 0 DASH complex subunit Dad2 2C_adapt PF08793.10 gi|121636680|ref|YP_976903.1| - 0.22 11.7 0.1 0.66 10.2 0.1 1.8 1 0 0 1 1 1 0 2-cysteine adaptor domain Response_reg PF00072.24 gi|121636681|ref|YP_976904.1| - 1.6e-27 95.9 0.0 3.1e-27 95.0 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636681|ref|YP_976904.1| - 1.7e-24 85.7 0.1 4.4e-23 81.2 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 gi|121636681|ref|YP_976904.1| - 0.033 14.6 0.0 0.043 14.2 0.0 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ B12-binding_2 PF02607.17 gi|121636681|ref|YP_976904.1| - 0.035 14.6 0.0 0.064 13.7 0.0 1.5 1 0 0 1 1 1 0 B12 binding domain B12-binding PF02310.19 gi|121636681|ref|YP_976904.1| - 0.043 13.9 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain HATPase_c PF02518.26 gi|121636682|ref|YP_976905.1| - 2.3e-28 98.9 0.0 4.1e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121636682|ref|YP_976905.1| - 5.8e-16 58.3 2.0 1.2e-15 57.2 0.9 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121636682|ref|YP_976905.1| - 1.7e-11 44.3 3.0 2.8e-11 43.6 0.6 2.5 2 0 0 2 2 2 1 HAMP domain HATPase_c_3 PF13589.6 gi|121636682|ref|YP_976905.1| - 1.3e-05 25.1 0.0 2.2e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HrcA PF01628.21 gi|121636682|ref|YP_976905.1| - 0.00088 19.3 0.2 0.0042 17.0 0.0 1.9 2 0 0 2 2 2 1 HrcA protein C terminal domain Pelovaterin PF17859.1 gi|121636682|ref|YP_976905.1| - 0.013 15.7 1.0 0.033 14.5 1.0 1.6 1 0 0 1 1 1 0 Pelovaterin HATPase_c_2 PF13581.6 gi|121636682|ref|YP_976905.1| - 0.017 15.1 0.1 0.032 14.2 0.1 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|121636682|ref|YP_976905.1| - 0.031 14.2 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 GHKL domain HIT PF01230.23 gi|121636683|ref|YP_976906.1| - 1.1e-17 64.6 0.1 1.3e-17 64.3 0.1 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|121636683|ref|YP_976906.1| - 0.00041 20.8 0.0 0.00054 20.4 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding NTF2 PF02136.20 gi|121636684|ref|YP_976907.1| - 2.3e-17 63.7 0.0 2.8e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 gi|121636684|ref|YP_976907.1| - 4.9e-10 40.0 0.0 6.5e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|121636684|ref|YP_976907.1| - 0.0054 17.1 0.0 0.0084 16.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) ADH_N PF08240.12 gi|121636685|ref|YP_976908.1| - 9e-28 96.3 0.3 9e-28 96.3 0.3 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121636685|ref|YP_976908.1| - 1.2e-18 67.3 0.9 2.7e-18 66.2 0.7 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase PFK PF00365.20 gi|121636685|ref|YP_976908.1| - 0.015 14.6 0.7 0.088 12.1 0.1 2.0 1 1 1 2 2 2 0 Phosphofructokinase NADH_4Fe-4S PF10589.9 gi|121636685|ref|YP_976908.1| - 0.016 15.2 0.2 0.035 14.2 0.2 1.6 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SnoaL_2 PF12680.7 gi|121636686|ref|YP_976909.1| - 7.7e-05 23.3 1.8 0.00011 22.8 1.8 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|121636686|ref|YP_976909.1| - 0.00075 19.8 0.7 0.0011 19.3 0.7 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 gi|121636686|ref|YP_976909.1| - 0.075 13.2 1.1 0.11 12.7 1.0 1.4 1 1 0 1 1 1 0 SnoaL-like domain Fer4_15 PF13459.6 gi|121636687|ref|YP_976910.1| - 6.5e-10 39.6 0.2 8.3e-10 39.3 0.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|121636687|ref|YP_976910.1| - 3.1e-07 30.8 0.1 3.8e-07 30.5 0.1 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_19 PF06902.11 gi|121636687|ref|YP_976910.1| - 1.4e-06 28.3 0.1 1.6e-06 28.1 0.1 1.1 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_6 PF12837.7 gi|121636687|ref|YP_976910.1| - 0.023 14.8 0.3 8.8 6.6 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain p450 PF00067.22 gi|121636688|ref|YP_976911.1| - 1.3e-66 225.3 0.0 1.5e-66 225.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 adh_short PF00106.25 gi|121636689|ref|YP_976912.1| - 2.5e-46 157.6 0.3 3e-46 157.4 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636689|ref|YP_976912.1| - 1.5e-39 135.9 0.2 2e-39 135.6 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636689|ref|YP_976912.1| - 5.7e-11 42.7 0.9 8e-11 42.2 0.9 1.1 1 0 0 1 1 1 1 KR domain DUF2460 PF09343.10 gi|121636689|ref|YP_976912.1| - 0.079 12.5 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) Epimerase PF01370.21 gi|121636689|ref|YP_976912.1| - 0.14 11.6 0.1 0.99 8.8 0.1 2.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family p450 PF00067.22 gi|121636690|ref|YP_976913.1| - 7.6e-21 74.4 0.0 1e-16 60.7 0.0 3.1 2 1 0 2 2 2 2 Cytochrome P450 TetR_N PF00440.23 gi|121636691|ref|YP_976914.1| - 3.5e-12 45.9 3.5 3.1e-11 42.9 1.1 2.3 2 0 0 2 2 2 2 Bacterial regulatory proteins, tetR family TetR_C_20 PF17925.1 gi|121636691|ref|YP_976914.1| - 1.3e-06 28.7 0.8 0.0001 22.6 0.0 2.2 2 0 0 2 2 2 2 Tetracyclin repressor-like, C-terminal domain Aldedh PF00171.22 gi|121636692|ref|YP_976915.1| - 4.1e-145 483.8 0.0 4.7e-145 483.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PAS_8 PF13188.7 gi|121636692|ref|YP_976915.1| - 0.072 13.1 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 PAS domain adh_short_C2 PF13561.6 gi|121636693|ref|YP_976916.1| - 9.3e-67 225.0 3.0 1.1e-66 224.7 3.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121636693|ref|YP_976916.1| - 2.9e-50 170.4 3.7 3.4e-50 170.2 3.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121636693|ref|YP_976916.1| - 7.4e-07 29.3 4.4 1.4e-06 28.4 2.1 1.9 1 1 1 2 2 2 1 KR domain Sacchrp_dh_NADP PF03435.18 gi|121636693|ref|YP_976916.1| - 0.0001 22.6 0.6 0.00016 21.9 0.6 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|121636693|ref|YP_976916.1| - 0.0081 15.6 1.4 0.016 14.7 1.4 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Glyco_trans_4_4 PF13579.6 gi|121636693|ref|YP_976916.1| - 0.027 14.9 0.2 0.58 10.6 0.2 2.6 3 0 0 3 3 3 0 Glycosyl transferase 4-like domain NAD_binding_2 PF03446.15 gi|121636694|ref|YP_976917.1| - 4.3e-37 127.7 0.5 6.8e-37 127.1 0.5 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|121636694|ref|YP_976917.1| - 1.7e-10 41.2 1.5 1.5e-09 38.2 1.5 2.3 1 1 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CMD PF02627.20 gi|121636695|ref|YP_976918.1| - 2.8e-09 36.9 0.1 7.7e-09 35.5 0.0 1.8 1 1 1 2 2 2 1 Carboxymuconolactone decarboxylase family GARS_A PF01071.19 gi|121636696|ref|YP_976919.1| - 9.7e-61 204.9 0.0 1.3e-60 204.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|121636696|ref|YP_976919.1| - 1e-29 103.2 0.7 2.5e-29 101.9 0.7 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|121636696|ref|YP_976919.1| - 2.5e-24 85.4 0.4 2.5e-24 85.4 0.4 1.8 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|121636696|ref|YP_976919.1| - 0.0017 18.4 0.0 0.0044 17.1 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain G_glu_transpept PF01019.21 gi|121636697|ref|YP_976920.1| - 3e-168 560.8 0.0 3.4e-168 560.6 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Esterase PF00756.20 gi|121636698|ref|YP_976921.1| - 1.3e-08 34.9 0.5 5.1e-08 32.9 0.5 1.9 1 1 0 1 1 1 1 Putative esterase Abhydrolase_1 PF00561.20 gi|121636698|ref|YP_976921.1| - 0.0051 16.5 0.7 0.0082 15.8 0.7 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121636698|ref|YP_976921.1| - 0.011 15.0 0.1 0.022 14.0 0.1 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Asp2 PF16929.5 gi|121636698|ref|YP_976921.1| - 0.022 13.7 0.0 0.027 13.4 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Abhydrolase_2 PF02230.16 gi|121636698|ref|YP_976921.1| - 0.037 13.8 0.4 5.1 6.8 0.0 2.2 1 1 1 2 2 2 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 gi|121636698|ref|YP_976921.1| - 0.2 11.1 0.1 0.31 10.5 0.1 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family TetR_C_31 PF17940.1 gi|121636699|ref|YP_976922.1| - 1e-16 61.1 5.5 1e-16 61.1 5.5 2.2 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121636699|ref|YP_976922.1| - 1.2e-08 34.6 0.6 2.2e-08 33.8 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family DUF429 PF04250.13 gi|121636700|ref|YP_976923.1| - 9.1e-32 110.6 8.6 1e-31 110.4 8.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF429) Lyase_1 PF00206.20 gi|121636701|ref|YP_976924.1| - 3.8e-24 85.6 0.0 5.6e-24 85.1 0.0 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|121636701|ref|YP_976924.1| - 3.7e-14 53.0 0.7 2.1e-13 50.6 0.7 2.4 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus p450 PF00067.22 gi|121636702|ref|YP_976925.1| - 6e-24 84.6 0.0 8.9e-22 77.5 0.0 2.6 2 1 0 2 2 2 1 Cytochrome P450 SAICAR_synt PF01259.18 gi|121636704|ref|YP_976927.1| - 1.3e-95 319.8 0.0 1.5e-95 319.6 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase Peptidase_S9_N PF02897.15 gi|121636705|ref|YP_976928.1| - 2.5e-119 398.8 0.0 3.1e-119 398.5 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S9 PF00326.21 gi|121636705|ref|YP_976928.1| - 8.8e-64 214.9 0.0 1.6e-63 214.0 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 gi|121636705|ref|YP_976928.1| - 0.024 14.5 0.0 0.044 13.6 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold AXE1 PF05448.12 gi|121636705|ref|YP_976928.1| - 0.046 12.4 0.0 0.073 11.7 0.0 1.3 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 gi|121636705|ref|YP_976928.1| - 0.065 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Esterase PF00756.20 gi|121636705|ref|YP_976928.1| - 0.099 12.3 0.0 0.24 11.0 0.0 1.5 1 1 0 1 1 1 0 Putative esterase Hydrolase_4 PF12146.8 gi|121636705|ref|YP_976928.1| - 0.15 11.3 0.0 0.25 10.6 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 MFS_1 PF07690.16 gi|121636706|ref|YP_976929.1| - 2.2e-50 171.6 47.8 2.2e-50 171.6 47.8 2.4 2 1 0 2 2 2 1 Major Facilitator Superfamily DUF2826 PF11442.8 gi|121636706|ref|YP_976929.1| - 0.086 12.7 0.5 0.19 11.6 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) CAAD PF14159.6 gi|121636706|ref|YP_976929.1| - 0.45 10.4 3.8 0.36 10.7 0.3 2.6 2 0 0 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase MFS_3 PF05977.13 gi|121636706|ref|YP_976929.1| - 2.7 6.3 32.5 0.53 8.6 14.0 2.7 2 1 1 3 3 3 0 Transmembrane secretion effector DUF2334 PF10096.9 gi|121636707|ref|YP_976930.1| - 8.7e-18 64.7 0.0 1.1e-17 64.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) FAD_binding_2 PF00890.24 gi|121636708|ref|YP_976931.1| - 3.3e-32 112.1 0.2 3.6e-32 112.0 0.2 1.0 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|121636708|ref|YP_976931.1| - 3.1e-09 36.9 0.8 6.3e-09 35.9 0.8 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|121636708|ref|YP_976931.1| - 9.6e-07 28.4 0.1 1.5e-06 27.8 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|121636708|ref|YP_976931.1| - 3.7e-06 26.8 0.2 3.9e-06 26.7 0.2 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121636708|ref|YP_976931.1| - 6.3e-06 25.6 0.2 8.7e-06 25.1 0.2 1.1 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|121636708|ref|YP_976931.1| - 1.2e-05 24.2 0.8 1.7e-05 23.8 0.8 1.1 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|121636708|ref|YP_976931.1| - 2.6e-05 23.5 0.3 3.3e-05 23.1 0.3 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|121636708|ref|YP_976931.1| - 4.1e-05 23.1 0.0 4.2e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121636708|ref|YP_976931.1| - 0.00011 21.6 0.1 0.00014 21.2 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|121636708|ref|YP_976931.1| - 0.00022 20.4 0.3 0.00033 19.8 0.3 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|121636708|ref|YP_976931.1| - 0.00094 18.5 0.0 0.0011 18.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|121636708|ref|YP_976931.1| - 0.0013 18.7 0.1 0.0017 18.3 0.1 1.2 1 0 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|121636708|ref|YP_976931.1| - 0.008 16.7 0.3 0.012 16.1 0.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|121636708|ref|YP_976931.1| - 0.017 14.4 0.1 0.028 13.7 0.1 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|121636708|ref|YP_976931.1| - 0.031 13.6 0.2 0.039 13.2 0.2 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|121636708|ref|YP_976931.1| - 0.11 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|121636708|ref|YP_976931.1| - 0.23 11.3 0.2 0.32 10.9 0.2 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 gi|121636709|ref|YP_976932.1| - 7.7e-61 206.4 0.1 8.7e-61 206.2 0.1 1.0 1 0 0 1 1 1 1 FAD binding domain Lactamase_B_3 PF13483.6 gi|121636710|ref|YP_976933.1| - 1.5e-06 28.2 0.1 1.9e-06 27.9 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|121636710|ref|YP_976933.1| - 0.033 13.7 0.1 0.044 13.3 0.1 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain PurS PF02700.14 gi|121636712|ref|YP_976935.1| - 8e-24 83.6 0.0 9.1e-24 83.4 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|121636713|ref|YP_976936.1| - 9.5e-38 129.8 0.0 1.8e-37 128.9 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|121636713|ref|YP_976936.1| - 1e-08 35.0 0.0 1.7e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|121636713|ref|YP_976936.1| - 4.3e-07 29.9 0.1 6.9e-07 29.2 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|121636713|ref|YP_976936.1| - 6.7e-07 29.3 0.0 8.7e-07 28.9 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121636713|ref|YP_976936.1| - 0.0011 18.7 0.4 0.0024 17.7 0.4 1.6 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|121636713|ref|YP_976936.1| - 0.011 15.5 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family YbjN PF10722.9 gi|121636714|ref|YP_976937.1| - 0.00041 20.4 0.3 0.0006 19.9 0.3 1.3 1 1 0 1 1 1 1 Putative bacterial sensory transduction regulator Transglut_core PF01841.19 gi|121636715|ref|YP_976938.1| - 1.1e-20 74.2 0.2 1.8e-20 73.4 0.2 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bac_luciferase PF00296.20 gi|121636716|ref|YP_976939.1| - 1.1e-57 195.9 1.1 1.1e-53 182.7 0.4 2.3 1 1 1 2 2 2 2 Luciferase-like monooxygenase UTRA PF07702.13 gi|121636717|ref|YP_976940.1| - 4.6e-36 123.8 0.1 1.6e-35 122.1 0.0 1.8 2 0 0 2 2 2 1 UTRA domain GntR PF00392.21 gi|121636717|ref|YP_976940.1| - 4.1e-17 61.6 1.3 8.7e-17 60.5 1.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 gi|121636717|ref|YP_976940.1| - 0.011 15.4 0.4 0.061 13.0 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|121636717|ref|YP_976940.1| - 0.016 14.7 0.1 0.096 12.3 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|121636717|ref|YP_976940.1| - 0.019 14.7 1.1 0.073 12.9 0.2 2.4 3 0 0 3 3 3 0 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|121636717|ref|YP_976940.1| - 0.026 14.5 0.0 0.056 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|121636717|ref|YP_976940.1| - 0.037 13.9 0.5 0.2 11.6 0.4 2.4 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 gi|121636717|ref|YP_976940.1| - 0.046 13.7 0.1 0.11 12.5 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PaaX PF07848.12 gi|121636717|ref|YP_976940.1| - 0.053 13.8 0.3 0.11 12.8 0.3 1.5 1 0 0 1 1 1 0 PaaX-like protein ABM PF03992.16 gi|121636718|ref|YP_976941.1| - 3.9e-17 62.1 0.0 4.6e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Pyr_redox_dim PF02852.22 gi|121636719|ref|YP_976942.1| - 1.4e-20 73.6 0.0 2.1e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 gi|121636720|ref|YP_976943.1| - 3.8e-31 108.4 0.1 5.4e-31 107.9 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121636720|ref|YP_976943.1| - 7.9e-14 52.0 2.9 2.8e-10 40.6 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121636720|ref|YP_976943.1| - 2.1e-07 30.5 0.2 0.00031 20.1 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|121636720|ref|YP_976943.1| - 1.8e-06 27.5 0.3 0.014 14.8 0.0 2.2 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|121636720|ref|YP_976943.1| - 0.00037 19.8 3.6 0.28 10.4 0.2 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|121636720|ref|YP_976943.1| - 0.00053 19.2 0.0 0.0015 17.7 0.0 1.6 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) XdhC_C PF13478.6 gi|121636720|ref|YP_976943.1| - 0.0021 18.6 0.3 0.82 10.2 0.0 2.4 2 0 0 2 2 2 1 XdhC Rossmann domain ThiF PF00899.21 gi|121636720|ref|YP_976943.1| - 0.0067 15.8 0.7 0.11 11.8 0.1 2.1 2 0 0 2 2 2 1 ThiF family ApbA PF02558.16 gi|121636720|ref|YP_976943.1| - 0.015 14.9 3.1 4.8 6.8 1.0 3.0 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA Thi4 PF01946.17 gi|121636720|ref|YP_976943.1| - 0.016 14.5 0.2 0.016 14.5 0.2 1.7 2 0 0 2 2 2 0 Thi4 family Lycopene_cycl PF05834.12 gi|121636720|ref|YP_976943.1| - 0.053 12.6 5.0 0.2 10.6 0.4 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_binding_2 PF00890.24 gi|121636720|ref|YP_976943.1| - 0.069 12.2 12.9 0.056 12.5 0.6 3.1 3 0 0 3 3 3 0 FAD binding domain GIDA PF01134.22 gi|121636720|ref|YP_976943.1| - 0.074 12.1 7.6 0.78 8.7 0.4 2.3 2 0 0 2 2 2 0 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|121636720|ref|YP_976943.1| - 0.079 12.8 6.6 1.6 8.6 0.6 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121636720|ref|YP_976943.1| - 0.11 13.0 3.1 3.7 8.0 0.2 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding AdoHcyase_NAD PF00670.21 gi|121636720|ref|YP_976943.1| - 0.12 12.5 1.7 7.1 6.7 0.5 2.3 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TrkA_N PF02254.18 gi|121636720|ref|YP_976943.1| - 0.16 12.3 3.8 0.23 11.7 0.3 2.3 2 0 0 2 2 2 0 TrkA-N domain HI0933_like PF03486.14 gi|121636720|ref|YP_976943.1| - 0.21 10.3 6.0 0.15 10.7 0.5 2.1 2 0 0 2 2 2 0 HI0933-like protein Shikimate_DH PF01488.20 gi|121636720|ref|YP_976943.1| - 0.3 11.1 0.3 3.9 7.5 0.1 2.2 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|121636720|ref|YP_976943.1| - 1.3 9.6 4.2 47 4.7 0.0 3.4 4 0 0 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 gi|121636720|ref|YP_976943.1| - 2 8.7 5.0 6.6 7.0 0.2 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|121636720|ref|YP_976943.1| - 2.6 7.2 7.7 1.8 7.7 0.6 2.3 2 0 0 2 2 2 0 FAD binding domain DEDD_Tnp_IS110 PF01548.17 gi|121636721|ref|YP_976944.1| - 6.7e-25 87.8 0.4 1.6e-24 86.5 0.4 1.7 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.16 gi|121636721|ref|YP_976944.1| - 1.8e-20 73.1 0.3 1.8e-20 73.1 0.3 1.9 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family Linocin_M18 PF04454.12 gi|121636722|ref|YP_976945.1| - 2.4e-95 318.6 0.0 2.8e-95 318.5 0.0 1.0 1 0 0 1 1 1 1 Encapsulating protein for peroxidase Dyp_perox PF04261.12 gi|121636723|ref|YP_976946.1| - 1.5e-103 346.2 0.0 2.1e-103 345.8 0.0 1.2 1 0 0 1 1 1 1 Dyp-type peroxidase family Peptidase_M18 PF02127.15 gi|121636724|ref|YP_976947.1| - 7.1e-144 479.8 0.0 8.4e-144 479.5 0.0 1.0 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 gi|121636724|ref|YP_976947.1| - 0.00061 18.9 0.1 0.055 12.5 0.0 2.3 1 1 0 2 2 2 2 M42 glutamyl aminopeptidase Glyoxalase_6 PF18029.1 gi|121636725|ref|YP_976948.1| - 3.1e-28 98.7 1.2 3.5e-28 98.5 1.2 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain MSP PF01716.18 gi|121636725|ref|YP_976948.1| - 0.088 12.0 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 Manganese-stabilising protein / photosystem II polypeptide Acetyltransf_3 PF13302.7 gi|121636726|ref|YP_976949.1| - 7.1e-11 42.9 0.0 9.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121636726|ref|YP_976949.1| - 0.16 12.2 0.0 0.25 11.6 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) family AIRS_C PF02769.22 gi|121636727|ref|YP_976950.1| - 8.8e-59 198.1 4.3 2.6e-35 121.8 0.3 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|121636727|ref|YP_976950.1| - 5.3e-49 164.8 7.6 4e-24 85.1 0.9 2.6 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|121636727|ref|YP_976950.1| - 2.9e-17 62.9 0.0 6.6e-17 61.8 0.0 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain DUF5605 PF18310.1 gi|121636727|ref|YP_976950.1| - 0.098 12.6 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) CPBP PF02517.16 gi|121636728|ref|YP_976951.1| - 7.8e-12 45.4 1.6 7.8e-12 45.4 1.6 2.4 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease CPP1-like PF11833.8 gi|121636728|ref|YP_976951.1| - 4.1 7.0 7.2 0.32 10.6 1.8 1.7 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Metallophos PF00149.28 gi|121636729|ref|YP_976952.1| - 2.3e-16 60.9 0.0 3.3e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|121636729|ref|YP_976952.1| - 5.3e-09 36.5 0.0 2e-08 34.6 0.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Stealth_CR2 PF11380.8 gi|121636730|ref|YP_976953.1| - 4.4e-40 136.2 0.0 7.3e-40 135.5 0.0 1.4 1 0 0 1 1 1 1 Stealth protein CR2, conserved region 2 Stealth_CR3 PF17102.5 gi|121636730|ref|YP_976953.1| - 4.8e-19 68.0 0.6 1e-18 67.0 0.6 1.6 1 0 0 1 1 1 1 Stealth protein CR3, conserved region 3 Stealth_CR4 PF17103.5 gi|121636730|ref|YP_976953.1| - 5.1e-17 61.5 0.4 1.3e-16 60.2 0.2 1.8 2 0 0 2 2 2 1 Stealth protein CR4, conserved region 4 Stealth_CR1 PF17101.5 gi|121636730|ref|YP_976953.1| - 5.6e-10 38.8 0.0 1.1e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 Stealth protein CR1, conserved region 1 N_NLPC_P60 PF12912.7 gi|121636730|ref|YP_976953.1| - 0.033 14.5 0.0 0.088 13.2 0.0 1.7 1 0 0 1 1 1 0 NLPC_P60 stabilising domain, N term SCP_3 PF17844.1 gi|121636731|ref|YP_976954.1| - 1.1e-38 130.8 0.8 1.6e-38 130.4 0.8 1.2 1 0 0 1 1 1 1 Bacterial SCP ortholog GATase_6 PF13522.6 gi|121636732|ref|YP_976955.1| - 6.3e-15 55.6 0.3 2.7e-14 53.5 0.1 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|121636732|ref|YP_976955.1| - 1.4e-12 47.6 0.0 9e-12 45.0 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|121636732|ref|YP_976955.1| - 1.6e-07 31.0 0.0 3e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_2 PF00310.21 gi|121636732|ref|YP_976955.1| - 8.7e-06 24.7 0.1 0.026 13.2 0.0 2.9 1 1 2 3 3 3 2 Glutamine amidotransferases class-II GATase_4 PF13230.6 gi|121636732|ref|YP_976955.1| - 0.00067 18.6 0.0 0.001 18.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II AIRS_C PF02769.22 gi|121636733|ref|YP_976956.1| - 1e-34 120.0 0.1 1.7e-34 119.2 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|121636733|ref|YP_976956.1| - 1.5e-16 60.8 0.7 3.4e-16 59.7 0.7 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain DUF3073 PF11273.8 gi|121636734|ref|YP_976957.1| - 2.3e-22 79.5 2.3 2.5e-22 79.3 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3073) GCV_T PF01571.21 gi|121636735|ref|YP_976958.1| - 4.9e-22 78.5 0.0 7.3e-22 78.0 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|121636735|ref|YP_976958.1| - 0.067 13.1 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain Aminotran_4 PF01063.19 gi|121636736|ref|YP_976959.1| - 5e-40 137.7 0.0 5.9e-40 137.5 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV DUF1794 PF08768.11 gi|121636737|ref|YP_976960.1| - 5.5e-43 146.5 0.0 6.8e-43 146.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) DUF1416 PF07210.12 gi|121636738|ref|YP_976961.1| - 2.6e-42 142.6 0.2 2.9e-42 142.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1416) CarboxypepD_reg PF13620.6 gi|121636738|ref|YP_976961.1| - 5.7e-10 39.3 1.4 2.4e-09 37.3 1.2 1.8 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF1069 PF06370.11 gi|121636738|ref|YP_976961.1| - 0.014 15.0 0.4 0.072 12.7 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1069) bMG3 PF11974.8 gi|121636738|ref|YP_976961.1| - 0.06 13.4 0.1 0.069 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial alpha-2-macroglobulin MG3 domain SdrD_B PF17210.3 gi|121636738|ref|YP_976961.1| - 0.061 13.5 0.0 0.091 13.0 0.0 1.4 1 1 0 1 1 1 0 SdrD B-like domain FixH PF05751.11 gi|121636738|ref|YP_976961.1| - 0.097 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 FixH Rhodanese PF00581.20 gi|121636739|ref|YP_976962.1| - 2.5e-38 130.9 0.5 5.5e-20 71.9 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Thioredoxin PF00085.20 gi|121636740|ref|YP_976963.1| - 7.1e-08 32.4 0.0 9.1e-08 32.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|121636740|ref|YP_976963.1| - 0.00082 19.4 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_2 PF13098.6 gi|121636740|ref|YP_976963.1| - 0.0022 18.4 0.0 0.026 15.0 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|121636740|ref|YP_976963.1| - 0.14 12.4 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin DUF2993 PF11209.8 gi|121636741|ref|YP_976964.1| - 1e-23 84.8 0.4 1.2e-23 84.4 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2993) Trans_reg_C PF00486.28 gi|121636742|ref|YP_976965.1| - 2.7e-28 97.8 0.0 4.2e-28 97.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Acetyltransf_1 PF00583.25 gi|121636743|ref|YP_976966.1| - 1.3e-17 64.1 0.0 1.1e-08 35.3 0.0 2.9 2 1 0 2 2 2 2 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121636743|ref|YP_976966.1| - 3.1e-12 46.8 0.0 7.9e-05 23.0 0.0 2.4 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121636743|ref|YP_976966.1| - 1.3e-09 37.8 1.1 0.0001 22.2 0.2 3.1 2 1 0 2 2 2 2 FR47-like protein Acetyltransf_10 PF13673.7 gi|121636743|ref|YP_976966.1| - 1.7e-09 37.7 0.1 0.0025 17.8 0.0 3.0 2 1 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|121636743|ref|YP_976966.1| - 0.00015 22.4 0.0 0.028 15.1 0.0 2.4 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|121636743|ref|YP_976966.1| - 0.0078 16.3 0.1 0.28 11.3 0.0 2.6 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|121636743|ref|YP_976966.1| - 0.12 12.5 0.3 0.58 10.2 0.1 2.2 3 0 0 3 3 3 0 Acetyltransferase (GNAT) domain ABC_tran PF00005.27 gi|121636744|ref|YP_976967.1| - 2.3e-16 60.6 0.0 2.7e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|121636744|ref|YP_976967.1| - 2.1e-05 24.8 0.0 2.9e-05 24.4 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|121636744|ref|YP_976967.1| - 2.3e-05 24.4 0.0 2.9e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|121636744|ref|YP_976967.1| - 0.00067 19.6 0.0 0.00096 19.1 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_30 PF13604.6 gi|121636744|ref|YP_976967.1| - 0.00085 19.1 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121636744|ref|YP_976967.1| - 0.0029 18.0 0.0 0.004 17.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|121636744|ref|YP_976967.1| - 0.0046 17.5 0.0 0.0073 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|121636744|ref|YP_976967.1| - 0.0061 16.7 0.0 0.0067 16.6 0.0 1.3 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|121636744|ref|YP_976967.1| - 0.0082 16.1 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase PRK PF00485.18 gi|121636744|ref|YP_976967.1| - 0.009 15.8 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 gi|121636744|ref|YP_976967.1| - 0.011 15.5 1.0 0.012 15.3 0.0 1.6 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 gi|121636744|ref|YP_976967.1| - 0.014 15.7 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|121636744|ref|YP_976967.1| - 0.016 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 gi|121636744|ref|YP_976967.1| - 0.029 14.7 0.1 0.043 14.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|121636744|ref|YP_976967.1| - 0.035 14.6 0.0 0.054 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|121636744|ref|YP_976967.1| - 0.045 13.7 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|121636744|ref|YP_976967.1| - 0.066 12.9 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|121636744|ref|YP_976967.1| - 0.08 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|121636744|ref|YP_976967.1| - 0.081 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PduV-EutP PF10662.9 gi|121636744|ref|YP_976967.1| - 0.15 11.8 0.1 0.3 10.8 0.1 1.5 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|121636744|ref|YP_976967.1| - 0.17 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 gi|121636744|ref|YP_976967.1| - 0.18 11.0 0.0 0.28 10.3 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 gi|121636744|ref|YP_976967.1| - 0.19 11.3 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain G-alpha PF00503.20 gi|121636744|ref|YP_976967.1| - 0.22 10.6 0.0 0.3 10.2 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_14 PF13173.6 gi|121636744|ref|YP_976967.1| - 0.25 11.4 0.0 0.39 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain PhoU PF01895.19 gi|121636745|ref|YP_976968.1| - 7.5e-25 87.2 5.3 4.8e-12 46.2 1.0 2.1 2 0 0 2 2 2 2 PhoU domain PhoU_div PF01865.16 gi|121636745|ref|YP_976968.1| - 0.017 14.5 0.1 0.031 13.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF47 LytR_cpsA_psr PF03816.14 gi|121636746|ref|YP_976969.1| - 6.1e-47 159.6 0.0 1.1e-46 158.8 0.0 1.4 1 0 0 1 1 1 1 Cell envelope-related transcriptional attenuator domain LytR_C PF13399.6 gi|121636746|ref|YP_976969.1| - 4.5e-16 59.6 1.1 1.2e-15 58.3 1.1 1.8 1 0 0 1 1 1 1 LytR cell envelope-related transcriptional attenuator Dus PF01207.17 gi|121636747|ref|YP_976970.1| - 9.6e-111 369.8 0.0 1.1e-110 369.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) FA_desaturase_2 PF03405.14 gi|121636748|ref|YP_976971.1| - 7.9e-90 301.0 0.1 9.1e-90 300.8 0.1 1.0 1 0 0 1 1 1 1 Fatty acid desaturase AAA_18 PF13238.6 gi|121636748|ref|YP_976971.1| - 0.13 12.8 0.4 1.1 9.9 0.0 2.5 2 1 0 2 2 2 0 AAA domain DUF1580 PF07618.11 gi|121636748|ref|YP_976971.1| - 0.13 11.9 0.1 0.29 10.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) TetR_N PF00440.23 gi|121636749|ref|YP_976972.1| - 1.7e-05 24.5 0.1 2.8e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Glyco_hydro_cc PF11790.8 gi|121636749|ref|YP_976972.1| - 0.047 13.3 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase catalytic core HTH_AraC PF00165.23 gi|121636749|ref|YP_976972.1| - 0.13 12.4 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF2236 PF09995.9 gi|121636750|ref|YP_976973.1| - 1.9e-57 195.1 11.6 2.5e-57 194.7 11.6 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2236) HTH_5 PF01022.20 gi|121636751|ref|YP_976974.1| - 6.1e-14 51.6 0.0 8.9e-14 51.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121636751|ref|YP_976974.1| - 1.3e-11 44.4 0.4 1.9e-11 43.8 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121636751|ref|YP_976974.1| - 2.9e-07 30.3 0.3 4.9e-07 29.5 0.3 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|121636751|ref|YP_976974.1| - 1.1e-05 25.1 1.4 1.4e-05 24.8 0.2 1.8 2 1 0 2 2 2 1 IclR helix-turn-helix domain DprA_WH PF17782.1 gi|121636751|ref|YP_976974.1| - 3.8e-05 23.7 0.8 9e-05 22.5 0.8 1.7 1 1 0 1 1 1 1 DprA winged helix domain HTH_24 PF13412.6 gi|121636751|ref|YP_976974.1| - 0.00019 20.9 0.0 0.00032 20.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|121636751|ref|YP_976974.1| - 0.00024 21.4 0.0 0.00033 20.9 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator TrmB PF01978.19 gi|121636751|ref|YP_976974.1| - 0.00084 19.2 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|121636751|ref|YP_976974.1| - 0.0077 16.1 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_Crp_2 PF13545.6 gi|121636751|ref|YP_976974.1| - 0.0089 16.0 0.1 0.013 15.5 0.1 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|121636751|ref|YP_976974.1| - 0.012 15.7 0.0 0.049 13.8 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_1 PF00126.27 gi|121636751|ref|YP_976974.1| - 0.044 13.7 0.1 0.092 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_47 PF16221.5 gi|121636751|ref|YP_976974.1| - 0.048 13.2 0.0 0.072 12.7 0.0 1.3 1 0 0 1 1 1 0 winged helix-turn-helix HTH_26 PF13443.6 gi|121636751|ref|YP_976974.1| - 0.16 12.4 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain ArsR PF09824.9 gi|121636751|ref|YP_976974.1| - 0.16 11.6 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 ArsR transcriptional regulator dCMP_cyt_deam_1 PF00383.23 gi|121636752|ref|YP_976975.1| - 9e-11 41.6 0.1 1.3e-10 41.1 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|121636752|ref|YP_976975.1| - 1.4e-08 34.6 0.0 1.9e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|121636752|ref|YP_976975.1| - 0.049 13.8 0.0 0.077 13.1 0.0 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 OrfB_Zn_ribbon PF07282.11 gi|121636753|ref|YP_976976.1| - 2.8e-09 36.8 1.5 3.9e-09 36.3 1.5 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain ChW PF07538.11 gi|121636753|ref|YP_976976.1| - 0.009 15.9 0.6 0.015 15.2 0.6 1.3 1 0 0 1 1 1 1 Clostridial hydrophobic W LCM PF04072.14 gi|121636754|ref|YP_976977.1| - 3.3e-61 206.5 0.2 4.5e-61 206.1 0.2 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase PE PF00934.20 gi|121636756|ref|YP_976979.1| - 4.9e-29 100.5 23.4 4.9e-29 100.5 23.4 1.5 2 0 0 2 2 2 1 PE family PE PF00934.20 gi|121636757|ref|YP_976980.1| - 2e-33 114.5 22.6 4.1e-33 113.6 22.6 1.5 1 0 0 1 1 1 1 PE family PknH_C PF14032.6 gi|121636758|ref|YP_976981.1| - 3.2e-27 95.6 0.0 4.3e-27 95.2 0.0 1.2 1 0 0 1 1 1 1 PknH-like extracellular domain AbiEii PF08843.11 gi|121636759|ref|YP_976982.1| - 0.0029 17.6 0.7 0.027 14.4 0.6 2.0 1 1 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system Peptidase_C3G PF12381.8 gi|121636759|ref|YP_976982.1| - 0.26 10.7 0.0 0.46 9.9 0.0 1.5 2 0 0 2 2 2 0 Tungro spherical virus-type peptidase AbiEi_2 PF09952.9 gi|121636760|ref|YP_976983.1| - 6e-42 143.3 0.0 8.6e-42 142.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin, Type IV TA system Peptidase_M15 PF01427.17 gi|121636761|ref|YP_976984.1| - 6.1e-79 264.4 0.0 7.1e-79 264.2 0.0 1.0 1 0 0 1 1 1 1 D-ala-D-ala dipeptidase Methyltransf_31 PF13847.6 gi|121636762|ref|YP_976985.1| - 2.1e-27 95.8 0.0 2.6e-27 95.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636762|ref|YP_976985.1| - 2.9e-24 85.5 0.1 5.3e-24 84.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121636762|ref|YP_976985.1| - 3e-23 82.3 0.1 5.3e-23 81.5 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636762|ref|YP_976985.1| - 2.4e-19 69.8 0.0 3.7e-19 69.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636762|ref|YP_976985.1| - 2.1e-16 60.5 0.0 3.3e-16 59.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121636762|ref|YP_976985.1| - 8.7e-15 54.7 0.0 1.2e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|121636762|ref|YP_976985.1| - 2.7e-07 30.3 0.0 4.2e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|121636762|ref|YP_976985.1| - 3.5e-07 30.0 0.0 5.5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.11 gi|121636762|ref|YP_976985.1| - 5.6e-07 29.4 0.0 8.2e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 gi|121636762|ref|YP_976985.1| - 3.8e-05 22.8 0.0 7.1e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 gi|121636762|ref|YP_976985.1| - 0.0001 21.5 0.0 0.00014 21.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|121636762|ref|YP_976985.1| - 0.00027 20.8 0.0 0.00038 20.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|121636762|ref|YP_976985.1| - 0.00031 20.3 0.0 0.0005 19.6 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase PrmA PF06325.13 gi|121636762|ref|YP_976985.1| - 0.005 16.3 0.0 0.0068 15.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_29 PF03141.16 gi|121636762|ref|YP_976985.1| - 0.0084 14.7 0.0 0.013 14.1 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase TehB PF03848.14 gi|121636762|ref|YP_976985.1| - 0.023 14.1 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 Tellurite resistance protein TehB CMAS PF02353.20 gi|121636762|ref|YP_976985.1| - 0.029 13.7 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 gi|121636762|ref|YP_976985.1| - 0.04 13.0 0.0 0.062 12.4 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase GCD14 PF08704.10 gi|121636762|ref|YP_976985.1| - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Abhydrolase_1 PF00561.20 gi|121636763|ref|YP_976986.1| - 5.3e-18 65.6 0.0 1.4e-17 64.2 0.0 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121636763|ref|YP_976986.1| - 3.6e-16 60.4 1.2 4.5e-16 60.1 1.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121636763|ref|YP_976986.1| - 8.8e-10 38.2 0.0 1.4e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 MFS_1 PF07690.16 gi|121636765|ref|YP_976988.1| - 1.2e-20 73.8 59.1 1.7e-15 56.8 27.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|121636765|ref|YP_976988.1| - 0.00053 19.0 0.0 0.00053 19.0 0.0 2.4 3 0 0 3 3 3 1 MFS_1 like family Sugar_tr PF00083.24 gi|121636765|ref|YP_976988.1| - 0.001 18.0 8.1 0.001 18.0 8.1 2.4 2 1 0 2 2 2 1 Sugar (and other) transporter E1_dh PF00676.20 gi|121636766|ref|YP_976989.1| - 1.4e-39 135.9 0.0 1.6e-39 135.7 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component Response_reg PF00072.24 gi|121636767|ref|YP_976990.1| - 1.3e-25 89.7 0.0 2e-25 89.1 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 gi|121636767|ref|YP_976990.1| - 9e-16 57.2 0.0 1.5e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|121636767|ref|YP_976990.1| - 1.3e-05 24.8 0.0 3.3e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_30 PF13556.6 gi|121636767|ref|YP_976990.1| - 0.00058 19.6 0.0 0.0012 18.6 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_28 PF13518.6 gi|121636767|ref|YP_976990.1| - 0.002 18.2 0.2 0.023 14.8 0.0 2.6 2 1 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121636767|ref|YP_976990.1| - 0.0035 17.2 0.1 0.0099 15.8 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_38 PF13936.6 gi|121636767|ref|YP_976990.1| - 0.0053 16.5 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|121636767|ref|YP_976990.1| - 0.0091 15.5 0.0 0.019 14.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|121636767|ref|YP_976990.1| - 0.016 15.0 0.0 0.054 13.3 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_40 PF14493.6 gi|121636767|ref|YP_976990.1| - 0.023 15.1 0.0 0.065 13.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|121636767|ref|YP_976990.1| - 0.11 12.6 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HATPase_c PF02518.26 gi|121636768|ref|YP_976991.1| - 0.00029 21.3 0.0 0.0007 20.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121636768|ref|YP_976991.1| - 0.0087 16.0 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Gp5_OB PF06714.11 gi|121636768|ref|YP_976991.1| - 0.092 13.0 0.2 0.17 12.1 0.2 1.3 1 0 0 1 1 1 0 Gp5 N-terminal OB domain DUF2070 PF09843.9 gi|121636768|ref|YP_976991.1| - 0.65 8.2 10.1 1 7.5 10.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF5134 PF17197.4 gi|121636768|ref|YP_976991.1| - 3.9 7.4 13.3 0.57 10.1 2.6 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF5134) Cu-oxidase_3 PF07732.15 gi|121636769|ref|YP_976992.1| - 3.2e-36 124.0 3.0 4.6e-27 94.4 0.1 3.2 3 0 0 3 3 3 3 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|121636769|ref|YP_976992.1| - 4.8e-35 120.3 5.4 1.1e-26 93.2 2.7 3.7 3 1 0 3 3 3 2 Multicopper oxidase Cu-oxidase PF00394.22 gi|121636769|ref|YP_976992.1| - 3.8e-32 111.6 0.0 1.6e-25 90.1 0.0 2.3 2 0 0 2 2 2 2 Multicopper oxidase DUF4148 PF13663.6 gi|121636770|ref|YP_976993.1| - 0.61 10.3 5.8 1.2 9.3 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) PALP PF00291.25 gi|121636771|ref|YP_976994.1| - 1.6e-45 155.8 0.1 2e-45 155.4 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme MFS_1 PF07690.16 gi|121636772|ref|YP_976995.1| - 2.9e-25 88.9 50.6 3.6e-24 85.4 35.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|121636772|ref|YP_976995.1| - 3.9e-06 25.7 29.6 2.3e-05 23.1 14.6 2.2 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_1_like PF12832.7 gi|121636772|ref|YP_976995.1| - 0.0041 16.0 3.6 0.0041 16.0 3.6 2.2 1 1 1 2 2 2 1 MFS_1 like family Folate_carrier PF01770.18 gi|121636772|ref|YP_976995.1| - 0.0065 15.3 0.2 0.014 14.2 0.2 1.6 1 0 0 1 1 1 1 Reduced folate carrier DUF452 PF04301.13 gi|121636772|ref|YP_976995.1| - 0.053 13.0 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF452) zf-ISL3 PF14690.6 gi|121636773|ref|YP_976996.1| - 0.0037 17.9 0.3 0.012 16.2 0.3 1.9 1 1 1 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 adh_short PF00106.25 gi|121636774|ref|YP_976997.1| - 8.1e-47 159.2 0.0 1.1e-46 158.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636774|ref|YP_976997.1| - 1.2e-37 129.7 0.0 1.8e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636774|ref|YP_976997.1| - 2.4e-16 60.2 0.0 3.4e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 KR domain B12-binding PF02310.19 gi|121636774|ref|YP_976997.1| - 0.002 18.1 1.6 0.068 13.2 0.8 2.9 2 1 0 2 2 2 1 B12 binding domain AMP-binding PF00501.28 gi|121636775|ref|YP_976998.1| - 0.048 12.3 0.0 0.081 11.5 0.0 1.3 1 0 0 1 1 1 0 AMP-binding enzyme TPP_enzyme_N PF02776.18 gi|121636776|ref|YP_976999.1| - 2.8e-34 118.2 0.9 1.4e-31 109.4 0.0 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|121636776|ref|YP_976999.1| - 3.8e-20 72.2 0.0 1.4e-19 70.4 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|121636776|ref|YP_976999.1| - 4.2e-10 39.5 0.5 4.1e-09 36.3 0.2 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain XFP_N PF09364.10 gi|121636776|ref|YP_976999.1| - 0.039 12.7 0.0 0.058 12.2 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain E1_dh PF00676.20 gi|121636776|ref|YP_976999.1| - 0.19 10.7 0.0 0.29 10.1 0.0 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component Polyketide_cyc2 PF10604.9 gi|121636777|ref|YP_977000.1| - 8.9e-20 71.4 0.3 1.1e-19 71.1 0.3 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121636777|ref|YP_977000.1| - 2.7e-15 56.7 0.1 3.2e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2505 PF10698.9 gi|121636777|ref|YP_977000.1| - 0.022 14.9 0.1 0.031 14.4 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2505) DUF3849 PF12960.7 gi|121636777|ref|YP_977000.1| - 0.14 12.2 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3849) CoA_transf_3 PF02515.17 gi|121636778|ref|YP_977001.1| - 6.5e-75 252.5 0.1 8.9e-75 252.1 0.1 1.1 1 0 0 1 1 1 1 CoA-transferase family III Polyketide_cyc PF03364.20 gi|121636779|ref|YP_977002.1| - 1.6e-08 34.8 0.0 1.8e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|121636779|ref|YP_977002.1| - 4.8e-07 30.1 0.0 5.7e-07 29.9 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|121636780|ref|YP_977003.1| - 5.4e-12 46.2 2.9 6.4e-12 46.0 2.9 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121636780|ref|YP_977003.1| - 4.7e-08 33.3 0.4 5.6e-08 33.1 0.4 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|121636780|ref|YP_977003.1| - 0.0016 18.7 0.6 0.0026 18.0 0.6 1.3 1 1 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Aminotran_1_2 PF00155.21 gi|121636781|ref|YP_977004.1| - 5e-61 206.9 0.0 5.8e-61 206.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|121636781|ref|YP_977004.1| - 5.8e-08 32.1 0.0 8.6e-08 31.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|121636781|ref|YP_977004.1| - 2.8e-06 26.1 0.0 4.2e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|121636781|ref|YP_977004.1| - 0.00025 20.5 1.8 0.00039 19.9 1.8 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|121636781|ref|YP_977004.1| - 0.024 13.9 0.0 0.043 13.1 0.0 1.7 1 1 0 1 1 1 0 Beta-eliminating lyase Thiolase_N PF00108.23 gi|121636782|ref|YP_977005.1| - 1.6e-49 168.6 0.0 2.1e-46 158.4 0.0 2.3 2 0 0 2 2 2 2 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121636782|ref|YP_977005.1| - 1.7e-47 160.1 0.1 4e-47 158.9 0.1 1.7 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121636782|ref|YP_977005.1| - 1.8e-05 24.4 0.2 3.8e-05 23.4 0.2 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 gi|121636782|ref|YP_977005.1| - 0.00019 21.6 0.0 0.00041 20.5 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|121636782|ref|YP_977005.1| - 0.078 12.8 0.0 0.24 11.3 0.0 1.9 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3HCDH_N PF02737.18 gi|121636783|ref|YP_977006.1| - 1.2e-62 211.0 0.1 2.2e-62 210.1 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|121636783|ref|YP_977006.1| - 3.5e-32 111.7 0.8 6.2e-32 110.9 0.8 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|121636783|ref|YP_977006.1| - 4.9e-21 75.2 0.3 2.6e-20 72.8 0.0 2.4 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|121636783|ref|YP_977006.1| - 9e-20 71.4 0.3 1.5e-19 70.6 0.3 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|121636783|ref|YP_977006.1| - 0.0014 18.8 0.8 0.0055 16.9 0.8 2.1 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|121636783|ref|YP_977006.1| - 0.0067 17.0 0.1 0.02 15.5 0.1 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Peptidase_S49 PF01343.18 gi|121636783|ref|YP_977006.1| - 0.02 14.8 0.2 2 8.4 0.0 3.0 3 0 0 3 3 3 0 Peptidase family S49 adh_short_C2 PF13561.6 gi|121636783|ref|YP_977006.1| - 0.022 14.3 0.2 0.43 10.1 0.1 2.6 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase NAD_binding_8 PF13450.6 gi|121636783|ref|YP_977006.1| - 0.097 12.9 0.6 0.3 11.3 0.6 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Helicase_C_3 PF13625.6 gi|121636784|ref|YP_977007.1| - 1.1e-44 151.6 1.8 2e-44 150.8 0.7 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|121636784|ref|YP_977007.1| - 5.8e-42 143.6 0.0 8e-42 143.2 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 gi|121636784|ref|YP_977007.1| - 1.9e-13 50.8 0.0 2.8e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|121636784|ref|YP_977007.1| - 9.8e-10 38.8 0.0 1.9e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|121636784|ref|YP_977007.1| - 0.0008 18.2 0.0 0.0034 16.2 0.0 1.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain DEAD PF00270.29 gi|121636784|ref|YP_977007.1| - 0.0076 16.0 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF3767 PF12597.8 gi|121636784|ref|YP_977007.1| - 0.095 12.5 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) Helicase_C_3 PF13625.6 gi|121636785|ref|YP_977008.1| - 3.2e-38 130.7 0.1 7.3e-38 129.6 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain WYL PF13280.6 gi|121636785|ref|YP_977008.1| - 0.0079 16.3 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 WYL domain MoaC PF01967.21 gi|121636787|ref|YP_977010.1| - 8.2e-54 181.4 2.9 9.1e-54 181.2 2.9 1.0 1 0 0 1 1 1 1 MoaC family MoCF_biosynth PF00994.24 gi|121636788|ref|YP_977011.1| - 7.7e-25 87.2 0.2 9.1e-25 87.0 0.2 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoaE PF02391.17 gi|121636789|ref|YP_977012.1| - 1.5e-30 105.8 1.6 1.7e-30 105.6 1.6 1.0 1 0 0 1 1 1 1 MoaE protein Transglycosylas PF06737.14 gi|121636790|ref|YP_977013.1| - 2.7e-35 120.9 7.2 5.8e-35 119.8 7.2 1.6 1 0 0 1 1 1 1 Transglycosylase-like domain ThiS PF02597.20 gi|121636791|ref|YP_977014.1| - 1.5e-13 51.2 0.0 1.7e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 ThiS family Mob_synth_C PF06463.13 gi|121636792|ref|YP_977015.1| - 2.7e-36 124.3 0.0 3.9e-36 123.8 0.0 1.2 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 gi|121636792|ref|YP_977015.1| - 4.7e-26 92.1 0.0 6.9e-26 91.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121636792|ref|YP_977015.1| - 4.6e-05 23.7 0.0 6.8e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|121636792|ref|YP_977015.1| - 9.3e-05 22.5 0.0 0.00017 21.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain YccF PF03733.13 gi|121636793|ref|YP_977016.1| - 1.1e-34 118.9 30.1 8e-18 64.9 14.7 2.1 2 0 0 2 2 2 2 Inner membrane component domain CSD PF00313.22 gi|121636794|ref|YP_977017.1| - 2.6e-15 56.0 0.0 3.6e-15 55.6 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|121636794|ref|YP_977017.1| - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain PE PF00934.20 gi|121636795|ref|YP_977018.1| - 4e-35 120.0 19.5 7e-35 119.2 19.5 1.4 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636795|ref|YP_977018.1| - 0.093 13.2 11.4 0.17 12.4 11.4 1.4 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Acyl-CoA_dh_1 PF00441.24 gi|121636796|ref|YP_977019.1| - 4.8e-32 111.2 2.7 9.3e-32 110.3 2.7 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636796|ref|YP_977019.1| - 7.5e-21 74.2 0.0 1.6e-20 73.1 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121636796|ref|YP_977019.1| - 4.8e-20 72.3 0.1 6.6e-19 68.6 0.0 2.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121636796|ref|YP_977019.1| - 0.00012 22.4 1.5 0.00012 22.4 1.5 2.4 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain DUF1974 PF09317.11 gi|121636796|ref|YP_977019.1| - 0.0027 17.3 0.1 0.0046 16.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) HpaB_N PF11794.8 gi|121636796|ref|YP_977019.1| - 0.0037 17.0 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal FIST_C PF10442.9 gi|121636797|ref|YP_977020.1| - 8e-25 87.3 1.0 1.3e-24 86.7 0.2 1.7 2 0 0 2 2 2 1 FIST C domain FIST PF08495.10 gi|121636797|ref|YP_977020.1| - 7.1e-24 84.7 0.2 5.4e-22 78.6 0.0 2.2 2 0 0 2 2 2 2 FIST N domain PEP-utilisers_N PF05524.13 gi|121636797|ref|YP_977020.1| - 0.096 12.9 0.1 0.26 11.5 0.1 1.7 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF2771 PF10969.8 gi|121636798|ref|YP_977021.1| - 5.9e-51 172.5 0.1 6.7e-51 172.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2771) MFS_1 PF07690.16 gi|121636799|ref|YP_977022.1| - 2.9e-11 42.9 31.1 4.6e-11 42.2 31.1 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3027 PF11228.8 gi|121636800|ref|YP_977023.1| - 1e-80 270.4 0.3 1.2e-80 270.1 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3027) PPE PF00823.19 gi|121636801|ref|YP_977024.1| - 5.8e-57 192.2 28.4 8.5e-57 191.7 28.4 1.2 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121636801|ref|YP_977024.1| - 4.4e-28 96.9 146.7 2e-08 34.0 22.0 6.2 2 2 4 6 6 6 6 Pentapeptide repeats (8 copies) DUF2530 PF10745.9 gi|121636802|ref|YP_977025.1| - 1e-29 102.6 10.7 1.1e-29 102.4 10.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2530) DUF3493 PF11998.8 gi|121636802|ref|YP_977025.1| - 0.016 15.4 0.1 0.016 15.4 0.1 1.7 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 MarR PF01047.22 gi|121636803|ref|YP_977026.1| - 3.7e-14 52.4 0.0 1e-13 51.0 0.0 1.8 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|121636803|ref|YP_977026.1| - 6.5e-07 29.1 1.0 2.1e-06 27.5 0.1 2.3 2 1 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|121636803|ref|YP_977026.1| - 0.0024 18.4 0.0 0.0052 17.2 0.0 1.7 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|121636803|ref|YP_977026.1| - 0.017 15.1 0.6 0.073 13.1 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|121636803|ref|YP_977026.1| - 0.022 14.6 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|121636803|ref|YP_977026.1| - 0.023 14.9 0.0 0.16 12.2 0.0 2.2 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain SpoU_methylase PF00588.19 gi|121636804|ref|YP_977027.1| - 9.3e-30 103.7 0.0 1.2e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family PHP PF02811.19 gi|121636804|ref|YP_977027.1| - 0.022 15.1 0.0 0.038 14.3 0.0 1.3 1 0 0 1 1 1 0 PHP domain DUF2537 PF10801.8 gi|121636805|ref|YP_977028.1| - 6.1e-30 103.3 24.1 7e-30 103.1 24.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2537) DUF3071 PF11268.8 gi|121636806|ref|YP_977029.1| - 1.1e-59 201.2 0.9 1.4e-59 200.9 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3071) Aminotran_5 PF00266.19 gi|121636807|ref|YP_977030.1| - 2.5e-16 59.6 0.0 4e-16 59.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V AurF PF11583.8 gi|121636808|ref|YP_977031.1| - 5.8e-108 360.5 0.0 6.9e-108 360.2 0.0 1.0 1 0 0 1 1 1 1 P-aminobenzoate N-oxygenase AurF Pyr_redox_2 PF07992.14 gi|121636809|ref|YP_977032.1| - 7.4e-11 41.8 0.1 2.8e-08 33.3 0.1 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|121636809|ref|YP_977032.1| - 5.9e-07 29.0 19.8 4.2e-06 26.4 6.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|121636809|ref|YP_977032.1| - 1.2e-05 25.1 5.0 1.2e-05 25.1 5.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|121636809|ref|YP_977032.1| - 2.2e-05 24.9 14.2 4.1e-05 24.1 14.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|121636809|ref|YP_977032.1| - 6.4e-05 23.8 9.1 0.00043 21.2 0.5 2.4 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain NAD_binding_8 PF13450.6 gi|121636809|ref|YP_977032.1| - 0.00012 22.2 0.0 0.00034 20.8 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|121636809|ref|YP_977032.1| - 0.00024 20.4 0.0 0.00044 19.6 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Fer4_9 PF13187.6 gi|121636809|ref|YP_977032.1| - 0.00033 20.8 11.4 0.00062 19.9 11.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|121636809|ref|YP_977032.1| - 0.00053 19.9 4.0 0.00053 19.9 4.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|121636809|ref|YP_977032.1| - 0.00078 19.5 2.4 0.00078 19.5 2.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Pyr_redox PF00070.27 gi|121636809|ref|YP_977032.1| - 0.00079 19.9 0.2 0.72 10.5 0.1 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|121636809|ref|YP_977032.1| - 0.007 16.8 0.3 0.54 10.7 0.0 2.8 3 0 0 3 3 2 1 Putative NAD(P)-binding Fer4_4 PF12800.7 gi|121636809|ref|YP_977032.1| - 0.013 15.9 2.7 0.013 15.9 2.7 2.3 2 0 0 2 2 1 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|121636809|ref|YP_977032.1| - 0.022 15.2 0.2 0.022 15.2 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain NAD_binding_9 PF13454.6 gi|121636809|ref|YP_977032.1| - 0.032 14.2 0.2 0.37 10.8 0.0 2.4 2 1 1 3 3 3 0 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|121636809|ref|YP_977032.1| - 0.033 12.9 0.0 0.051 12.3 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 gi|121636809|ref|YP_977032.1| - 0.035 13.4 0.1 4.7 6.4 0.0 2.3 2 0 0 2 2 2 0 Thi4 family Shikimate_DH PF01488.20 gi|121636809|ref|YP_977032.1| - 0.064 13.3 0.3 3 7.9 0.0 2.9 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase UPF0146 PF03686.13 gi|121636809|ref|YP_977032.1| - 0.074 12.9 0.1 0.22 11.4 0.1 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Pyr_redox_3 PF13738.6 gi|121636809|ref|YP_977032.1| - 0.17 11.1 0.0 3.9 6.6 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Fer4_21 PF14697.6 gi|121636809|ref|YP_977032.1| - 0.18 12.0 16.6 1.5e+02 2.6 6.7 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain 3HCDH_N PF02737.18 gi|121636809|ref|YP_977032.1| - 0.2 11.5 0.2 2.5 8.0 0.0 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4_17 PF13534.6 gi|121636809|ref|YP_977032.1| - 1.9 9.1 11.0 0.35 11.5 0.3 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Glyoxalase_6 PF18029.1 gi|121636810|ref|YP_977033.1| - 1.4e-10 41.9 0.0 2.4e-10 41.1 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|121636810|ref|YP_977033.1| - 2e-10 41.0 0.0 4e-10 40.0 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|121636810|ref|YP_977033.1| - 0.02 15.2 0.0 0.07 13.4 0.0 1.9 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Big_9 PF17963.1 gi|121636811|ref|YP_977034.1| - 2.8e-13 50.4 1.2 2.8e-13 50.4 1.2 2.4 2 1 0 2 2 2 1 Bacterial Ig domain Exo_endo_phos PF03372.23 gi|121636811|ref|YP_977034.1| - 4.6e-13 49.2 0.1 6.8e-13 48.7 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Cadherin_4 PF17803.1 gi|121636811|ref|YP_977034.1| - 0.016 15.8 0.0 0.016 15.8 0.0 2.7 3 1 0 3 3 3 0 Bacterial cadherin-like domain Cadherin_5 PF17892.1 gi|121636811|ref|YP_977034.1| - 0.055 13.4 1.2 0.094 12.7 0.1 1.9 2 0 0 2 2 2 0 Cadherin-like domain Exo_endo_phos_2 PF14529.6 gi|121636811|ref|YP_977034.1| - 0.098 12.5 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Citrate_synt PF00285.21 gi|121636812|ref|YP_977035.1| - 1e-83 281.4 0.3 2.2e-82 277.1 0.3 2.0 1 1 0 1 1 1 1 Citrate synthase, C-terminal domain GerE PF00196.19 gi|121636813|ref|YP_977036.1| - 4.3e-19 67.8 0.0 7.9e-19 67.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|121636813|ref|YP_977036.1| - 4.1e-07 29.6 0.0 1e-06 28.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|121636813|ref|YP_977036.1| - 0.00014 21.5 0.0 0.00063 19.5 0.0 2.2 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 gi|121636813|ref|YP_977036.1| - 0.00033 20.4 0.0 0.00087 19.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain AAA_22 PF13401.6 gi|121636813|ref|YP_977036.1| - 0.00057 20.2 0.1 0.0023 18.2 0.0 2.0 2 0 0 2 2 1 1 AAA domain HTH_29 PF13551.6 gi|121636813|ref|YP_977036.1| - 0.0014 18.6 0.0 0.0046 16.9 0.0 2.0 1 0 0 1 1 1 1 Winged helix-turn helix NB-ARC PF00931.22 gi|121636813|ref|YP_977036.1| - 0.0026 17.0 0.0 0.0058 15.8 0.0 1.5 1 1 0 1 1 1 1 NB-ARC domain HTH_24 PF13412.6 gi|121636813|ref|YP_977036.1| - 0.0045 16.5 0.0 0.013 15.1 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Tnp_ISL3 PF13542.6 gi|121636813|ref|YP_977036.1| - 0.0084 15.5 0.0 0.041 13.3 0.0 2.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_40 PF14493.6 gi|121636813|ref|YP_977036.1| - 0.012 16.1 0.0 0.032 14.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|121636813|ref|YP_977036.1| - 0.039 13.5 0.0 0.1 12.2 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|121636813|ref|YP_977036.1| - 0.054 13.6 0.0 0.21 11.7 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF4807 PF16065.5 gi|121636813|ref|YP_977036.1| - 0.056 13.1 0.0 0.056 13.1 0.0 2.5 3 0 0 3 3 2 0 Domain of unknown function (DUF4807) CENP-B_N PF04218.13 gi|121636813|ref|YP_977036.1| - 0.088 12.5 0.0 0.2 11.3 0.0 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain MarR_2 PF12802.7 gi|121636813|ref|YP_977036.1| - 0.12 12.3 6.0 0.6 10.1 0.2 4.2 4 0 0 4 4 4 0 MarR family HemY_N PF07219.13 gi|121636813|ref|YP_977036.1| - 8 6.7 12.3 0.55 10.4 5.2 2.7 2 0 0 2 2 2 0 HemY protein N-terminus Guanylate_cyc PF00211.20 gi|121636814|ref|YP_977037.1| - 1.8e-12 47.2 0.0 2.3e-11 43.7 0.0 2.2 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain FMO-like PF00743.19 gi|121636815|ref|YP_977038.1| - 1.7e-21 76.3 0.0 7.2e-21 74.2 0.0 1.9 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 gi|121636815|ref|YP_977038.1| - 3e-17 62.9 0.0 4.5e-14 52.4 0.0 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|121636815|ref|YP_977038.1| - 1.6e-13 50.5 0.0 9.4e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121636815|ref|YP_977038.1| - 1.5e-12 47.5 0.3 4.9e-12 45.9 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121636815|ref|YP_977038.1| - 5.6e-09 36.1 7.5 3.2e-05 23.7 0.4 3.6 1 1 0 3 3 3 3 FAD dependent oxidoreductase K_oxygenase PF13434.6 gi|121636815|ref|YP_977038.1| - 1.8e-08 33.9 0.1 8.7e-06 25.1 0.0 3.0 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|121636815|ref|YP_977038.1| - 9.3e-07 29.0 5.1 0.0021 18.1 0.0 4.4 4 1 0 4 4 4 1 FAD-NAD(P)-binding Amino_oxidase PF01593.24 gi|121636815|ref|YP_977038.1| - 7.8e-06 25.4 0.1 0.00087 18.7 0.0 2.6 2 1 1 3 3 3 1 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 gi|121636815|ref|YP_977038.1| - 3.5e-05 24.3 0.2 0.11 13.0 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|121636815|ref|YP_977038.1| - 0.00028 20.1 0.9 0.00055 19.1 0.6 1.6 2 0 0 2 2 2 1 FAD binding domain Shikimate_DH PF01488.20 gi|121636815|ref|YP_977038.1| - 0.0034 17.5 0.6 0.76 9.8 0.0 2.9 3 0 0 3 3 3 1 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 gi|121636815|ref|YP_977038.1| - 0.014 14.6 0.1 0.03 13.6 0.1 1.5 1 0 0 1 1 1 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|121636815|ref|YP_977038.1| - 0.15 12.0 2.4 9.9 6.1 0.2 2.3 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA PF01134.22 gi|121636815|ref|YP_977038.1| - 0.16 11.0 3.8 1 8.3 0.2 2.5 3 0 0 3 3 3 0 Glucose inhibited division protein A 2-Hacid_dh_C PF02826.19 gi|121636815|ref|YP_977038.1| - 0.22 10.9 0.1 3.5 6.9 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|121636815|ref|YP_977038.1| - 0.31 9.7 4.6 0.12 11.1 0.7 2.1 3 0 0 3 3 3 0 HI0933-like protein 3HCDH_N PF02737.18 gi|121636815|ref|YP_977038.1| - 1.8 8.4 5.7 1.2 9.0 0.5 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|121636815|ref|YP_977038.1| - 3.4 7.3 4.6 19 4.9 0.9 2.4 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|121636815|ref|YP_977038.1| - 4.1 6.7 4.5 33 3.7 0.0 2.6 3 0 0 3 3 3 0 ThiF family LCM PF04072.14 gi|121636816|ref|YP_977039.1| - 1.5e-56 191.3 0.1 2.3e-56 190.7 0.1 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase AAA_16 PF13191.6 gi|121636817|ref|YP_977040.1| - 3.1e-07 30.9 1.0 3.4e-06 27.6 1.0 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|121636817|ref|YP_977040.1| - 0.0056 16.3 0.0 0.013 15.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|121636817|ref|YP_977040.1| - 0.016 15.2 0.0 0.028 14.3 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|121636817|ref|YP_977040.1| - 0.019 14.9 1.5 0.22 11.4 1.7 2.4 2 1 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 gi|121636817|ref|YP_977040.1| - 0.024 14.9 0.0 0.061 13.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121636817|ref|YP_977040.1| - 0.072 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein PhoH PF02562.16 gi|121636817|ref|YP_977040.1| - 0.11 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 gi|121636817|ref|YP_977040.1| - 0.13 11.4 0.0 0.22 10.7 0.0 1.4 1 1 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|121636817|ref|YP_977040.1| - 0.16 11.9 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase WES_acyltransf PF03007.16 gi|121636818|ref|YP_977041.1| - 9e-94 314.1 6.4 1.3e-93 313.6 6.4 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121636818|ref|YP_977041.1| - 1.2e-30 106.4 0.0 2.5e-30 105.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121636818|ref|YP_977041.1| - 0.0017 17.1 0.0 0.065 11.9 0.0 2.1 2 0 0 2 2 2 2 Condensation domain Citrate_synt PF00285.21 gi|121636819|ref|YP_977042.1| - 1.3e-133 445.5 0.0 1.6e-133 445.3 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain NAD_binding_8 PF13450.6 gi|121636820|ref|YP_977043.1| - 8.8e-09 35.5 0.8 8.8e-09 35.5 0.8 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|121636820|ref|YP_977043.1| - 1.6e-06 27.6 0.9 6.4e-06 25.6 1.0 1.8 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|121636820|ref|YP_977043.1| - 1.6e-06 27.5 0.2 3e-06 26.7 0.2 1.3 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|121636820|ref|YP_977043.1| - 3.1e-06 26.5 0.6 4.8e-06 25.9 0.6 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A DAO PF01266.24 gi|121636820|ref|YP_977043.1| - 3.1e-06 27.0 8.4 0.00069 19.3 3.4 3.0 1 1 1 3 3 3 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121636820|ref|YP_977043.1| - 5.9e-06 25.7 2.2 0.00034 19.9 1.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121636820|ref|YP_977043.1| - 1.6e-05 24.5 3.4 1.6e-05 24.5 3.4 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121636820|ref|YP_977043.1| - 1.9e-05 23.9 4.0 1.9e-05 23.9 4.0 1.9 2 0 0 2 2 2 1 FAD binding domain Amino_oxidase PF01593.24 gi|121636820|ref|YP_977043.1| - 3.6e-05 23.2 1.6 0.039 13.2 0.6 2.3 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|121636820|ref|YP_977043.1| - 0.00058 18.7 0.7 0.00085 18.1 0.7 1.2 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox PF00070.27 gi|121636820|ref|YP_977043.1| - 0.00078 20.0 0.8 0.0043 17.6 1.2 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|121636820|ref|YP_977043.1| - 0.012 14.5 0.8 0.018 13.9 0.8 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|121636820|ref|YP_977043.1| - 0.044 12.8 1.1 0.12 11.4 0.7 1.8 1 1 1 2 2 2 0 Lycopene cyclase protein CHASE2 PF05226.11 gi|121636820|ref|YP_977043.1| - 0.062 13.0 0.0 0.11 12.1 0.0 1.4 1 1 0 1 1 1 0 CHASE2 domain 3HCDH_N PF02737.18 gi|121636820|ref|YP_977043.1| - 9.9 6.0 6.3 1.8 8.4 0.6 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF2630 PF10944.8 gi|121636821|ref|YP_977044.1| - 1.1e-32 112.3 2.5 1.2e-32 112.2 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2630) CHASE3 PF05227.13 gi|121636821|ref|YP_977044.1| - 0.048 13.6 2.7 0.088 12.7 2.7 1.4 1 1 0 1 1 1 0 CHASE3 domain OmpA PF00691.20 gi|121636822|ref|YP_977045.1| - 6.7e-21 74.5 0.0 1.7e-20 73.2 0.0 1.7 2 0 0 2 2 2 1 OmpA family BON PF04972.17 gi|121636822|ref|YP_977045.1| - 2.4e-10 40.6 0.0 4.8e-06 26.8 0.0 2.7 2 0 0 2 2 2 2 BON domain Parvo_NS1 PF01057.17 gi|121636822|ref|YP_977045.1| - 0.21 10.7 0.0 0.28 10.2 0.0 1.1 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 HATPase_c PF02518.26 gi|121636825|ref|YP_977048.1| - 2.2e-17 63.5 0.0 4.2e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121636825|ref|YP_977048.1| - 1.4e-10 41.1 1.1 3.4e-10 39.8 1.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121636825|ref|YP_977048.1| - 2.2e-08 34.4 1.3 8e-07 29.3 0.2 2.7 2 0 0 2 2 2 1 HAMP domain HATPase_c_2 PF13581.6 gi|121636825|ref|YP_977048.1| - 8.2e-05 22.6 0.0 0.00017 21.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain LapA_dom PF06305.11 gi|121636825|ref|YP_977048.1| - 0.015 15.1 0.2 0.4 10.5 0.0 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain HATPase_c_3 PF13589.6 gi|121636825|ref|YP_977048.1| - 0.057 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Med14 PF08638.11 gi|121636825|ref|YP_977048.1| - 0.16 11.4 0.3 0.27 10.6 0.3 1.3 1 0 0 1 1 1 0 Mediator complex subunit MED14 Response_reg PF00072.24 gi|121636826|ref|YP_977049.1| - 3.2e-29 101.3 0.1 4.8e-29 100.8 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636826|ref|YP_977049.1| - 1.1e-25 89.5 0.0 2.5e-25 88.3 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF1869 PF08956.10 gi|121636826|ref|YP_977049.1| - 0.0032 17.3 0.0 0.012 15.5 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1869) OKR_DC_1_N PF03709.15 gi|121636826|ref|YP_977049.1| - 0.031 14.6 0.0 0.053 13.8 0.0 1.3 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain Carboxyl_trans PF01039.22 gi|121636827|ref|YP_977050.1| - 1.5e-94 317.4 0.0 1.9e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain ECH_1 PF00378.20 gi|121636827|ref|YP_977050.1| - 5.8e-05 22.5 0.3 0.0024 17.2 0.2 3.0 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase ACCA PF03255.14 gi|121636827|ref|YP_977050.1| - 7.5e-05 22.6 0.0 0.00026 20.9 0.0 1.8 2 0 0 2 2 2 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MdcE PF06833.11 gi|121636827|ref|YP_977050.1| - 0.11 11.9 9.4 0.26 10.7 2.2 2.7 2 1 0 3 3 3 0 Malonate decarboxylase gamma subunit (MdcE) DEC-1_N PF04625.13 gi|121636827|ref|YP_977050.1| - 3.7 6.5 6.7 1.2 8.1 0.4 2.1 2 0 0 2 2 2 0 DEC-1 protein, N-terminal region ECH_1 PF00378.20 gi|121636828|ref|YP_977051.1| - 7e-44 150.0 0.1 8.1e-44 149.8 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636828|ref|YP_977051.1| - 1.8e-21 77.0 0.0 2.6e-21 76.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Lactamase_B_2 PF12706.7 gi|121636829|ref|YP_977052.1| - 2.3e-49 167.7 1.4 3.5e-49 167.1 1.4 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|121636829|ref|YP_977052.1| - 4.9e-16 59.1 0.1 8.1e-16 58.3 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|121636829|ref|YP_977052.1| - 0.11 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain DUF58 PF01882.18 gi|121636829|ref|YP_977052.1| - 0.2 12.0 0.3 2.1 8.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function DUF58 Beta-lactamase PF00144.24 gi|121636830|ref|YP_977053.1| - 1.7e-60 205.0 5.4 2.1e-60 204.7 5.4 1.1 1 0 0 1 1 1 1 Beta-lactamase DUF3471 PF11954.8 gi|121636830|ref|YP_977053.1| - 3.4e-13 50.0 0.0 6.8e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3471) E1-E2_ATPase PF00122.20 gi|121636831|ref|YP_977054.1| - 1.5e-40 138.7 0.6 1.5e-40 138.7 0.6 3.5 3 1 2 5 5 5 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121636831|ref|YP_977054.1| - 1.6e-19 71.1 2.4 2.9e-19 70.2 2.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121636831|ref|YP_977054.1| - 3.5e-05 23.7 0.0 6.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|121636831|ref|YP_977054.1| - 0.14 11.8 0.0 0.14 11.8 0.0 2.1 2 0 0 2 2 2 0 Cation transporter/ATPase, N-terminus Cation_ATPase_C PF00689.21 gi|121636831|ref|YP_977054.1| - 0.17 11.6 19.4 0.012 15.3 9.3 3.3 3 1 1 4 4 4 0 Cation transporting ATPase, C-terminus HRG PF16954.5 gi|121636831|ref|YP_977054.1| - 1.7 9.1 4.9 2 8.9 1.8 2.6 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene MT0933_antitox PF14013.6 gi|121636832|ref|YP_977055.1| - 3.6e-17 62.4 0.5 4.1e-17 62.2 0.5 1.1 1 0 0 1 1 1 1 MT0933-like antitoxin protein Phage_Gp19 PF09355.10 gi|121636832|ref|YP_977055.1| - 0.096 13.1 0.1 0.11 13.0 0.1 1.1 1 0 0 1 1 1 0 Phage protein Gp19/Gp15/Gp42 Polyketide_cyc2 PF10604.9 gi|121636833|ref|YP_977056.1| - 1.5e-21 77.2 0.1 1.7e-21 77.0 0.1 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121636833|ref|YP_977056.1| - 0.04 14.1 0.2 0.53 10.5 0.2 2.1 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport IMS PF00817.20 gi|121636833|ref|YP_977056.1| - 0.2 11.6 0.0 0.24 11.4 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family Glyoxalase_6 PF18029.1 gi|121636834|ref|YP_977057.1| - 9.6e-18 64.9 0.4 4.2e-08 33.9 0.0 2.1 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase PF00903.25 gi|121636834|ref|YP_977057.1| - 7.2e-13 48.9 0.1 2.7e-06 27.6 0.0 3.0 1 1 1 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|121636834|ref|YP_977057.1| - 0.0086 16.3 0.2 9.6 6.5 0.1 3.1 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Phage_holin_2_4 PF16082.5 gi|121636835|ref|YP_977058.1| - 6.8 6.5 6.5 0.3 10.8 0.6 1.9 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like DUF4131 PF13567.6 gi|121636835|ref|YP_977058.1| - 8 6.1 7.2 1.1 8.9 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) RPE65 PF03055.15 gi|121636836|ref|YP_977059.1| - 3.1e-103 346.5 0.0 3.5e-103 346.3 0.0 1.0 1 0 0 1 1 1 1 Retinal pigment epithelial membrane protein Thiolase_N PF00108.23 gi|121636837|ref|YP_977060.1| - 8.3e-10 38.5 0.5 7.4e-09 35.4 0.5 2.1 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121636837|ref|YP_977060.1| - 5.4e-08 32.5 0.0 1.1e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121636837|ref|YP_977060.1| - 0.00065 19.4 0.6 0.0016 18.1 0.6 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain PPE PF00823.19 gi|121636838|ref|YP_977061.1| - 5.9e-60 201.9 30.2 5.9e-60 201.9 30.2 2.2 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121636838|ref|YP_977061.1| - 3.8e-14 53.3 14.3 3.8e-14 53.3 14.3 4.8 2 1 0 2 2 2 1 Polymorphic PE/PPE proteins C terminal PE PF00934.20 gi|121636839|ref|YP_977062.1| - 2e-26 92.1 6.1 2.3e-26 91.9 6.1 1.0 1 0 0 1 1 1 1 PE family BCCT PF02028.17 gi|121636840|ref|YP_977063.1| - 9e-181 601.5 41.7 1e-180 601.3 41.7 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter ODV-E18 PF10717.9 gi|121636840|ref|YP_977063.1| - 0.45 10.4 5.9 8 6.4 0.3 2.7 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF1778 PF08681.11 gi|121636841|ref|YP_977064.1| - 1.7e-24 85.6 3.8 1.7e-24 85.6 3.8 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1778) Acetyltransf_1 PF00583.25 gi|121636842|ref|YP_977065.1| - 3.1e-10 40.3 0.0 3.9e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|121636842|ref|YP_977065.1| - 6.2e-09 35.9 0.0 3.2e-08 33.5 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121636842|ref|YP_977065.1| - 3.8e-08 33.6 0.0 5.9e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|121636842|ref|YP_977065.1| - 0.096 12.8 0.0 0.47 10.5 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Transposase_mut PF00872.18 gi|121636843|ref|YP_977066.1| - 2e-145 484.5 0.0 2.6e-145 484.0 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family DDE_Tnp_IS66 PF03050.14 gi|121636843|ref|YP_977066.1| - 0.00012 21.7 0.0 0.39 10.1 0.0 2.5 2 1 0 2 2 2 2 Transposase IS66 family DDE_Tnp_IS240 PF13610.6 gi|121636843|ref|YP_977066.1| - 0.03 14.6 0.0 0.084 13.1 0.0 1.8 1 0 0 1 1 1 0 DDE domain Sigma70_r4_2 PF08281.12 gi|121636843|ref|YP_977066.1| - 0.059 13.0 0.0 6.1 6.6 0.0 2.6 2 0 0 2 2 2 0 Sigma-70, region 4 EutK_C PF16365.5 gi|121636843|ref|YP_977066.1| - 0.065 13.3 0.0 0.24 11.5 0.0 2.0 1 0 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus HTH_32 PF13565.6 gi|121636843|ref|YP_977066.1| - 0.11 13.1 0.0 0.51 11.0 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain MULE PF10551.9 gi|121636843|ref|YP_977066.1| - 0.17 12.3 0.0 0.57 10.6 0.0 1.9 2 0 0 2 2 2 0 MULE transposase domain Resolvase PF00239.21 gi|121636844|ref|YP_977067.1| - 3.8e-20 72.5 0.2 4.7e-20 72.2 0.2 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|121636844|ref|YP_977067.1| - 0.00063 19.9 0.0 0.0016 18.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121636844|ref|YP_977067.1| - 0.015 15.1 0.0 0.035 13.9 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain OrfB_IS605 PF01385.19 gi|121636845|ref|YP_977068.1| - 3.9e-30 104.5 0.0 6.9e-30 103.7 0.0 1.3 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|121636845|ref|YP_977068.1| - 1.9e-05 24.5 0.0 4.8e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|121636845|ref|YP_977068.1| - 0.0012 18.3 0.5 0.072 12.6 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain Gamma_PGA_hydro PF05908.11 gi|121636846|ref|YP_977069.1| - 1.6e-42 145.1 0.0 2.2e-42 144.7 0.0 1.1 1 0 0 1 1 1 1 Poly-gamma-glutamate hydrolase AIG2_2 PF13772.6 gi|121636846|ref|YP_977069.1| - 3.4e-14 53.0 0.0 6.5e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 AIG2-like family GGACT PF06094.12 gi|121636846|ref|YP_977069.1| - 1.5e-12 48.1 0.0 3.8e-12 46.9 0.0 1.7 2 0 0 2 2 2 1 Gamma-glutamyl cyclotransferase, AIG2-like Nramp PF01566.18 gi|121636847|ref|YP_977070.1| - 8.4e-113 377.0 16.2 1.3e-112 376.3 16.2 1.3 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein FMN_red PF03358.15 gi|121636848|ref|YP_977071.1| - 3.2e-11 43.2 0.0 4.2e-11 42.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase GCSF PF16647.5 gi|121636848|ref|YP_977071.1| - 0.081 12.8 0.0 0.22 11.4 0.0 1.6 2 0 0 2 2 2 0 Granulocyte colony-stimulating factor Flavodoxin_2 PF02525.17 gi|121636848|ref|YP_977071.1| - 0.2 11.3 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin-like fold DapB_N PF01113.20 gi|121636849|ref|YP_977072.1| - 0.0012 19.0 0.0 0.0019 18.3 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|121636849|ref|YP_977072.1| - 0.024 15.0 0.0 0.054 13.9 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 gi|121636850|ref|YP_977073.1| - 2.4e-56 190.9 6.4 3e-56 190.6 6.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121636850|ref|YP_977073.1| - 6e-45 153.1 4.7 7.3e-45 152.8 4.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121636850|ref|YP_977073.1| - 6.7e-10 39.2 4.2 9.4e-10 38.7 4.2 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 gi|121636850|ref|YP_977073.1| - 0.0045 16.9 1.0 0.0073 16.2 1.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121636850|ref|YP_977073.1| - 0.019 15.4 0.2 0.035 14.5 0.2 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|121636850|ref|YP_977073.1| - 0.025 14.9 0.1 0.05 13.9 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|121636850|ref|YP_977073.1| - 0.11 12.5 0.1 0.32 11.1 0.1 1.7 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase PBP_like_2 PF12849.7 gi|121636851|ref|YP_977074.1| - 8.3e-55 186.4 8.7 1.1e-54 186.0 8.7 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|121636851|ref|YP_977074.1| - 3e-11 43.8 1.7 3.7e-11 43.5 1.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|121636851|ref|YP_977074.1| - 1.1e-05 24.6 0.1 5.8e-05 22.3 0.1 2.0 1 1 0 1 1 1 1 PBP superfamily domain BPD_transp_1 PF00528.22 gi|121636852|ref|YP_977075.1| - 2.2e-16 60.2 16.3 2.2e-16 60.2 16.3 2.2 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121636853|ref|YP_977076.1| - 2.3e-22 79.6 17.0 2.3e-22 79.6 17.0 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5316 PF17247.2 gi|121636853|ref|YP_977076.1| - 1 9.4 0.0 1 9.4 0.0 3.2 4 0 0 4 4 4 0 Family of unknown function (DUF5316) NHL PF01436.21 gi|121636854|ref|YP_977077.1| - 4.5e-41 136.9 17.2 2.1e-08 33.8 0.0 6.5 6 0 0 6 6 6 6 NHL repeat SBBP PF06739.11 gi|121636854|ref|YP_977077.1| - 4.5e-14 52.2 17.3 0.00081 19.3 0.1 6.8 7 0 0 7 7 7 5 Beta-propeller repeat SGL PF08450.12 gi|121636854|ref|YP_977077.1| - 8.8e-13 48.4 5.4 3.6e-08 33.3 3.6 5.0 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region SdiA-regulated PF06977.11 gi|121636854|ref|YP_977077.1| - 7.6e-07 28.6 4.3 1.3 8.2 0.0 5.1 1 1 4 5 5 5 2 SdiA-regulated US22 PF02393.16 gi|121636854|ref|YP_977077.1| - 2e-06 28.1 8.3 1.8 8.9 0.0 5.9 3 2 3 6 6 6 1 US22 like DUF4140 PF13600.6 gi|121636854|ref|YP_977077.1| - 0.0008 19.8 1.0 1.3 9.5 0.1 3.7 2 1 2 4 4 4 1 N-terminal domain of unknown function (DUF4140) SUKH-3 PF14433.6 gi|121636854|ref|YP_977077.1| - 0.0015 19.0 0.3 34 4.9 0.0 4.4 2 2 3 5 5 5 0 SUKH-3 immunity protein Phytase-like PF13449.6 gi|121636854|ref|YP_977077.1| - 0.0021 18.1 0.1 1 9.3 0.0 3.6 2 1 3 5 5 5 1 Esterase-like activity of phytase Ldl_recept_b PF00058.17 gi|121636854|ref|YP_977077.1| - 0.0037 17.7 1.2 94 3.6 0.0 5.2 6 0 0 6 6 6 0 Low-density lipoprotein receptor repeat class B RNR_inhib PF08591.10 gi|121636854|ref|YP_977077.1| - 0.0043 18.3 0.0 13 7.1 0.0 4.0 2 1 1 3 3 3 1 Ribonucleotide reductase inhibitor RbcS PF12338.8 gi|121636854|ref|YP_977077.1| - 0.024 14.8 7.1 45 4.3 0.0 5.4 5 0 0 5 5 5 0 Ribulose-1,5-bisphosphate carboxylase small subunit PQQ_3 PF13570.6 gi|121636854|ref|YP_977077.1| - 0.26 11.9 30.5 2.2 8.9 0.1 6.7 6 1 0 6 6 6 0 PQQ-like domain Pkinase PF00069.25 gi|121636855|ref|YP_977078.1| - 2.2e-44 151.8 0.0 2.5e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121636855|ref|YP_977078.1| - 5.3e-29 101.3 0.0 6.5e-29 101.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121636855|ref|YP_977078.1| - 5.8e-07 29.7 1.6 5.4e-05 23.2 0.1 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|121636855|ref|YP_977078.1| - 1.3e-05 24.7 0.0 2.1e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|121636855|ref|YP_977078.1| - 0.001 17.9 0.0 0.0015 17.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 gi|121636855|ref|YP_977078.1| - 0.0021 17.7 0.0 0.025 14.2 0.0 2.0 1 1 1 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 gi|121636855|ref|YP_977078.1| - 0.0054 15.7 0.0 0.0092 15.0 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain PBP_like_2 PF12849.7 gi|121636856|ref|YP_977079.1| - 1.8e-46 159.1 7.8 2.4e-46 158.7 7.8 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|121636856|ref|YP_977079.1| - 7e-15 55.8 2.2 9.2e-15 55.4 2.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|121636856|ref|YP_977079.1| - 1.7e-05 24.1 0.0 3.3e-05 23.1 0.0 1.5 1 1 0 1 1 1 1 PBP superfamily domain ABC_tran PF00005.27 gi|121636857|ref|YP_977080.1| - 0.00022 21.8 0.0 0.0003 21.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ATPase PF06745.13 gi|121636857|ref|YP_977080.1| - 0.0021 17.5 0.1 0.0026 17.2 0.1 1.1 1 0 0 1 1 1 1 KaiC AAA_29 PF13555.6 gi|121636857|ref|YP_977080.1| - 0.0026 17.5 0.1 0.0048 16.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|121636857|ref|YP_977080.1| - 0.0048 16.5 0.2 0.0057 16.3 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|121636857|ref|YP_977080.1| - 0.021 15.3 0.1 0.024 15.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|121636857|ref|YP_977080.1| - 0.11 11.5 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|121636857|ref|YP_977080.1| - 0.15 12.5 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 gi|121636857|ref|YP_977080.1| - 0.19 11.8 0.3 0.31 11.0 0.3 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DEAD PF00270.29 gi|121636857|ref|YP_977080.1| - 0.2 11.4 0.1 0.21 11.3 0.1 1.2 1 0 0 1 1 1 0 DEAD/DEAH box helicase cobW PF02492.19 gi|121636857|ref|YP_977080.1| - 0.21 11.2 0.1 0.37 10.4 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 gi|121636857|ref|YP_977080.1| - 0.29 10.3 0.0 0.36 10.0 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain ABC_tran PF00005.27 gi|121636858|ref|YP_977081.1| - 1.3e-17 64.6 0.0 1.8e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121636858|ref|YP_977081.1| - 2.3e-09 37.5 0.0 3e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121636858|ref|YP_977081.1| - 1.4e-06 27.9 0.0 2.1e-06 27.3 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|121636858|ref|YP_977081.1| - 0.095 13.0 0.0 1.8 8.8 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PBP_like_2 PF12849.7 gi|121636859|ref|YP_977082.1| - 6.3e-41 140.9 4.8 7.9e-41 140.6 4.8 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|121636859|ref|YP_977082.1| - 9e-28 98.1 3.3 1.1e-27 97.8 3.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|121636859|ref|YP_977082.1| - 1.4e-07 30.8 0.0 9e-07 28.2 0.1 2.1 2 1 0 2 2 2 1 PBP superfamily domain GrlR PF16518.5 gi|121636859|ref|YP_977082.1| - 0.088 12.8 0.1 2.2 8.2 0.1 2.2 1 1 1 2 2 2 0 T3SS negative regulator,GrlR BPD_transp_1 PF00528.22 gi|121636860|ref|YP_977083.1| - 6.4e-14 52.1 8.7 6.4e-14 52.1 8.7 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Keratin_assoc PF09775.9 gi|121636860|ref|YP_977083.1| - 6.5 6.4 7.9 0.84 9.3 3.1 2.0 2 0 0 2 2 2 0 Keratinocyte-associated protein 2 BPD_transp_1 PF00528.22 gi|121636861|ref|YP_977084.1| - 7e-26 91.1 12.5 7e-26 91.1 12.5 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Ku PF02735.16 gi|121636862|ref|YP_977085.1| - 1.1e-41 142.9 0.0 1.3e-41 142.5 0.0 1.1 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain MmoB_DmpM PF02406.17 gi|121636862|ref|YP_977085.1| - 0.039 14.2 0.0 0.083 13.1 0.0 1.5 1 0 0 1 1 1 0 MmoB/DmpM family TF_Zn_Ribbon PF08271.12 gi|121636862|ref|YP_977085.1| - 0.039 13.5 0.3 0.13 11.8 0.0 1.9 2 0 0 2 2 2 0 TFIIB zinc-binding LigD_N PF13298.6 gi|121636863|ref|YP_977086.1| - 3.5e-38 130.1 0.1 6.4e-38 129.3 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) DNA_ligase_A_M PF01068.21 gi|121636863|ref|YP_977086.1| - 2.7e-27 95.7 0.0 5.5e-27 94.7 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 gi|121636863|ref|YP_977086.1| - 6e-23 81.3 0.0 1.5e-22 80.1 0.0 1.7 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|121636863|ref|YP_977086.1| - 1.4e-06 28.7 0.0 2.5e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 RNA ligase DNA_primase_S PF01896.19 gi|121636863|ref|YP_977086.1| - 0.001 19.1 0.0 0.011 15.8 0.0 2.2 1 1 0 1 1 1 1 DNA primase small subunit FAA_hydrolase PF01557.18 gi|121636864|ref|YP_977087.1| - 2e-48 165.0 0.0 4.5e-48 163.8 0.0 1.6 2 0 0 2 2 2 1 Fumarylacetoacetate (FAA) hydrolase family Lactamase_B PF00753.27 gi|121636864|ref|YP_977087.1| - 4.6e-22 79.0 7.5 1.4e-21 77.4 3.1 2.4 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121636864|ref|YP_977087.1| - 9.5e-06 25.3 0.1 2e-05 24.2 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF2437 PF10370.9 gi|121636864|ref|YP_977087.1| - 0.007 17.2 1.5 0.018 15.9 0.2 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF2437) Bac_luciferase PF00296.20 gi|121636865|ref|YP_977088.1| - 3.3e-46 158.2 0.1 4.4e-46 157.7 0.1 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase STAS PF01740.21 gi|121636866|ref|YP_977089.1| - 5.1e-11 42.2 0.0 9.7e-11 41.3 0.0 1.5 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121636866|ref|YP_977089.1| - 0.37 11.2 3.6 8 6.9 1.7 2.5 2 0 0 2 2 2 0 STAS domain DUF4873 PF16170.5 gi|121636868|ref|YP_977091.1| - 1.3e-29 102.2 0.2 3.3e-29 100.9 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4873) NAD_binding_7 PF13241.6 gi|121636868|ref|YP_977091.1| - 0.013 16.0 0.1 0.051 14.0 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding H2TH PF06831.14 gi|121636869|ref|YP_977092.1| - 2.9e-18 65.7 0.0 3.8e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 gi|121636869|ref|YP_977092.1| - 4.5e-08 32.8 1.3 8.3e-08 32.0 1.3 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS zf-TFIIB PF13453.6 gi|121636869|ref|YP_977092.1| - 0.0018 17.6 2.6 0.003 16.9 2.6 1.4 1 0 0 1 1 1 1 Transcription factor zinc-finger Ribosomal_S13 PF00416.22 gi|121636869|ref|YP_977092.1| - 0.0093 16.4 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|121636869|ref|YP_977092.1| - 0.065 12.0 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) zf_CopZ PF18423.1 gi|121636869|ref|YP_977092.1| - 0.12 12.3 0.3 14 5.7 0.0 2.3 2 0 0 2 2 2 0 Zinc binding domain OrfB_Zn_ribbon PF07282.11 gi|121636869|ref|YP_977092.1| - 0.15 12.0 0.4 0.28 11.1 0.4 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF2752 PF10825.8 gi|121636869|ref|YP_977092.1| - 0.34 11.0 3.9 0.34 11.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Zn-ribbon_8 PF09723.10 gi|121636869|ref|YP_977092.1| - 0.39 10.9 3.1 4.8 7.4 3.5 2.1 1 1 1 2 2 2 0 Zinc ribbon domain zf-RRN7 PF11781.8 gi|121636869|ref|YP_977092.1| - 0.8 9.4 4.2 3.2 7.5 4.2 1.9 1 1 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 adh_short PF00106.25 gi|121636870|ref|YP_977093.1| - 3.8e-43 147.2 0.2 4.8e-43 146.9 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636870|ref|YP_977093.1| - 2.7e-29 102.4 1.2 3.3e-29 102.1 1.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636870|ref|YP_977093.1| - 5.3e-12 46.0 0.3 8.8e-12 45.3 0.3 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121636870|ref|YP_977093.1| - 0.00021 20.8 0.1 0.00059 19.4 0.1 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family MLTR_LBD PF17765.1 gi|121636870|ref|YP_977093.1| - 0.016 15.3 0.1 0.072 13.2 0.1 2.0 2 0 0 2 2 2 0 MmyB-like transcription regulator ligand binding domain Polysacc_synt_2 PF02719.15 gi|121636870|ref|YP_977093.1| - 0.017 14.2 0.0 0.025 13.7 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|121636870|ref|YP_977093.1| - 0.07 12.2 0.0 0.1 11.6 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain TruB_C PF09142.11 gi|121636870|ref|YP_977093.1| - 0.19 11.6 0.0 0.19 11.6 0.0 2.3 3 0 0 3 3 3 0 tRNA Pseudouridine synthase II, C terminal PGI PF00342.19 gi|121636871|ref|YP_977094.1| - 7.3e-201 668.0 0.0 8.3e-201 667.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase CM_2 PF01817.21 gi|121636873|ref|YP_977096.1| - 7.9e-11 42.2 0.5 1e-10 41.8 0.5 1.2 1 0 0 1 1 1 1 Chorismate mutase type II GreA_GreB_N PF03449.15 gi|121636873|ref|YP_977096.1| - 0.19 11.9 0.3 0.19 11.9 0.3 1.8 2 0 0 2 2 2 0 Transcription elongation factor, N-terminal UvrD-helicase PF00580.21 gi|121636874|ref|YP_977097.1| - 3e-76 256.9 0.0 3.5e-75 253.5 0.0 2.0 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|121636874|ref|YP_977097.1| - 3.1e-68 230.7 0.0 8e-68 229.4 0.0 1.6 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|121636874|ref|YP_977097.1| - 7e-34 117.3 0.0 1.2e-33 116.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|121636874|ref|YP_977097.1| - 1e-11 44.5 0.0 3.8e-11 42.6 0.0 2.1 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|121636874|ref|YP_977097.1| - 3.9e-07 30.0 3.0 1.2e-05 25.1 0.4 2.3 2 0 0 2 2 2 2 AAA domain CarD_CdnL_TRCF PF02559.16 gi|121636874|ref|YP_977097.1| - 0.056 14.1 0.2 0.34 11.6 0.1 2.4 2 0 0 2 2 2 0 CarD-like/TRCF domain Viral_helicase1 PF01443.18 gi|121636874|ref|YP_977097.1| - 0.086 12.6 0.2 4.1 7.1 0.0 3.1 3 1 0 3 3 3 0 Viral (Superfamily 1) RNA helicase Peptidase_M23 PF01551.22 gi|121636875|ref|YP_977098.1| - 3.4e-30 104.1 0.2 6.7e-30 103.2 0.2 1.5 1 0 0 1 1 1 1 Peptidase family M23 ATP-grasp_2 PF08442.10 gi|121636876|ref|YP_977099.1| - 9.7e-70 234.2 0.2 1.7e-69 233.4 0.2 1.4 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|121636876|ref|YP_977099.1| - 3e-13 49.9 2.0 5.5e-13 49.0 2.0 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|121636876|ref|YP_977099.1| - 2.7e-08 33.5 1.4 3e-07 30.1 1.4 2.1 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|121636876|ref|YP_977099.1| - 4.6e-06 26.3 0.2 1.1e-05 25.1 0.2 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.19 gi|121636876|ref|YP_977099.1| - 0.0014 18.4 0.0 0.0026 17.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Baculo_E25 PF05274.11 gi|121636876|ref|YP_977099.1| - 0.18 11.7 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein E25 CoA_binding PF02629.19 gi|121636877|ref|YP_977100.1| - 3.1e-27 95.1 4.5 3e-26 91.9 1.8 2.5 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|121636877|ref|YP_977100.1| - 8.2e-14 51.7 0.5 1.8e-13 50.6 0.5 1.6 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|121636877|ref|YP_977100.1| - 3.2e-11 43.2 0.1 6.4e-11 42.2 0.1 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|121636877|ref|YP_977100.1| - 0.0003 21.3 0.2 0.00074 20.0 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain Bac_luciferase PF00296.20 gi|121636878|ref|YP_977101.1| - 5.4e-51 173.9 5.5 7.4e-51 173.4 5.5 1.2 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF5336 PF17270.2 gi|121636879|ref|YP_977102.1| - 3.1e-57 192.9 13.4 3.1e-57 192.9 13.4 2.6 2 1 0 2 2 2 1 Family of unknown function (DUF5336) GRP PF07172.11 gi|121636879|ref|YP_977102.1| - 0.031 15.0 1.8 0.031 15.0 1.8 2.6 2 0 0 2 2 2 0 Glycine rich protein family MerC PF03203.14 gi|121636879|ref|YP_977102.1| - 0.5 10.8 10.8 1.1 9.8 10.6 1.6 1 1 0 1 1 1 0 MerC mercury resistance protein DUF998 PF06197.13 gi|121636879|ref|YP_977102.1| - 2 8.0 22.0 6.3 6.3 22.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF998) DUF4233 PF14017.6 gi|121636879|ref|YP_977102.1| - 2.9 8.3 14.4 0.64 10.4 10.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4233) DUF2157 PF09925.9 gi|121636879|ref|YP_977102.1| - 3.1 7.6 11.1 7.3 6.4 10.8 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Formyl_trans_N PF00551.19 gi|121636881|ref|YP_977104.1| - 3.6e-41 140.9 0.0 4.3e-41 140.6 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase DUF2000 PF09391.10 gi|121636881|ref|YP_977104.1| - 0.095 12.6 0.0 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2000) AICARFT_IMPCHas PF01808.18 gi|121636882|ref|YP_977105.1| - 3e-108 361.8 0.0 3.7e-108 361.5 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|121636882|ref|YP_977105.1| - 4.9e-25 87.6 0.0 9.4e-25 86.6 0.0 1.5 1 0 0 1 1 1 1 MGS-like domain Mg_chelatase PF01078.21 gi|121636883|ref|YP_977106.1| - 3.3e-08 33.2 0.0 0.00078 18.9 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|121636883|ref|YP_977106.1| - 6.6e-07 29.2 0.0 4.5e-05 23.2 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_5 PF07728.14 gi|121636883|ref|YP_977106.1| - 1e-06 28.8 0.0 0.021 14.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|121636883|ref|YP_977106.1| - 1.6e-05 24.8 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_PrkA PF08298.11 gi|121636883|ref|YP_977106.1| - 0.00017 20.6 0.0 0.00076 18.5 0.0 1.8 1 1 1 2 2 2 1 PrkA AAA domain MCM PF00493.23 gi|121636883|ref|YP_977106.1| - 0.00061 18.9 0.0 0.0057 15.8 0.0 2.1 2 0 0 2 2 2 1 MCM P-loop domain AAA_16 PF13191.6 gi|121636883|ref|YP_977106.1| - 0.0035 17.8 0.5 0.014 15.8 0.5 2.3 1 1 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|121636883|ref|YP_977106.1| - 0.012 16.1 0.0 0.038 14.5 0.0 1.8 2 0 0 2 2 2 0 ABC transporter NACHT PF05729.12 gi|121636883|ref|YP_977106.1| - 0.048 13.6 0.0 0.097 12.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain DLIC PF05783.11 gi|121636883|ref|YP_977106.1| - 0.07 12.0 0.0 0.18 10.6 0.0 1.6 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) VWA_2 PF13519.6 gi|121636884|ref|YP_977107.1| - 7.2e-06 26.6 0.0 0.00016 22.3 0.0 3.2 1 1 0 1 1 1 1 von Willebrand factor type A domain DUF1932 PF09130.11 gi|121636884|ref|YP_977107.1| - 0.19 11.7 2.4 2.4 8.2 0.3 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1932) LTXXQ PF07813.12 gi|121636884|ref|YP_977107.1| - 1.6 9.5 8.4 0.14 12.9 1.7 2.9 2 2 1 3 3 3 0 LTXXQ motif family protein PAPA-1 PF04795.12 gi|121636884|ref|YP_977107.1| - 7.1 7.5 8.6 1.3 9.9 2.7 2.4 2 0 0 2 2 2 0 PAPA-1-like conserved region RHH_1 PF01402.21 gi|121636885|ref|YP_977108.1| - 0.0056 16.6 0.6 0.013 15.4 0.4 1.8 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121636885|ref|YP_977108.1| - 0.012 15.4 0.4 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 DUF2761 PF10959.8 gi|121636885|ref|YP_977108.1| - 0.12 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2761) PIN PF01850.21 gi|121636886|ref|YP_977109.1| - 3.1e-15 56.8 0.4 3.4e-15 56.6 0.4 1.0 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|121636886|ref|YP_977109.1| - 0.00098 19.4 0.1 0.0025 18.0 0.1 1.6 1 1 0 1 1 1 1 PIN domain Glyco_hydro_15 PF00723.21 gi|121636886|ref|YP_977109.1| - 0.18 10.5 0.0 0.27 10.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 15 DIM PF08194.12 gi|121636887|ref|YP_977110.1| - 0.082 13.1 0.3 0.082 13.1 0.3 2.4 3 1 0 3 3 3 0 DIM protein LppA PF16708.5 gi|121636888|ref|YP_977111.1| - 1.7e-32 112.5 0.1 7.9e-32 110.3 0.0 2.0 3 0 0 3 3 3 1 Lipoprotein confined to pathogenic Mycobacterium Abhydrolase_8 PF06259.12 gi|121636889|ref|YP_977112.1| - 1.8e-72 242.7 2.5 2.3e-72 242.3 2.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase Abhydrolase_1 PF00561.20 gi|121636889|ref|YP_977112.1| - 0.083 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold MurB_C PF02873.16 gi|121636890|ref|YP_977113.1| - 0.032 14.3 1.0 0.052 13.6 1.0 1.3 1 0 0 1 1 1 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DUF1328 PF07043.13 gi|121636890|ref|YP_977113.1| - 0.34 11.2 1.7 0.59 10.4 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1328) DUF2563 PF10817.8 gi|121636891|ref|YP_977114.1| - 0.0032 18.0 4.7 0.013 16.1 1.5 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF2563) DUF1707 PF08044.11 gi|121636892|ref|YP_977115.1| - 6.8e-16 58.1 8.9 9.7e-16 57.6 7.9 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1707) DUF2154 PF09922.9 gi|121636892|ref|YP_977115.1| - 4.6e-05 23.3 0.0 8.1e-05 22.5 0.0 1.4 1 1 0 1 1 1 1 Cell wall-active antibiotics response 4TMS YvqF Trns_repr_metal PF02583.17 gi|121636893|ref|YP_977116.1| - 1.2e-24 86.4 0.9 1.6e-24 86.0 0.9 1.1 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor Rogdi_lz PF10259.9 gi|121636893|ref|YP_977116.1| - 0.091 12.2 0.0 0.091 12.2 0.0 1.1 1 0 0 1 1 1 0 Rogdi leucine zipper containing protein DUF1490 PF07371.12 gi|121636894|ref|YP_977117.1| - 3.5e-38 129.6 8.0 4.1e-38 129.3 8.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1490) UCR_Fe-S_N PF10399.9 gi|121636894|ref|YP_977117.1| - 6.8 6.1 7.5 14 5.1 3.1 2.3 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E1-E2_ATPase PF00122.20 gi|121636895|ref|YP_977118.1| - 4.4e-55 186.0 5.7 1.1e-54 184.8 5.7 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121636895|ref|YP_977118.1| - 1.3e-52 179.2 10.4 2.3e-52 178.3 10.4 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121636895|ref|YP_977118.1| - 1.5e-05 24.9 0.5 0.0002 21.2 0.1 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121636895|ref|YP_977118.1| - 0.0087 16.5 0.5 0.054 13.9 0.5 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|121636895|ref|YP_977118.1| - 0.018 15.1 0.1 0.13 12.4 0.0 2.4 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase APH PF01636.23 gi|121636895|ref|YP_977118.1| - 0.051 13.5 0.8 0.11 12.4 0.8 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family HAD_2 PF13419.6 gi|121636895|ref|YP_977118.1| - 0.07 13.2 0.0 0.15 12.1 0.0 1.5 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF4225 PF13988.6 gi|121636895|ref|YP_977118.1| - 0.42 10.2 3.5 0.49 9.9 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF4225) DUF5134 PF17197.4 gi|121636896|ref|YP_977119.1| - 5.7e-37 126.9 31.5 5.7e-37 126.9 31.5 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF5134) ECH_1 PF00378.20 gi|121636897|ref|YP_977120.1| - 7e-43 146.7 0.0 9.1e-43 146.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636897|ref|YP_977120.1| - 1e-26 94.3 0.1 1.2e-26 94.0 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Acyl-CoA_dh_1 PF00441.24 gi|121636898|ref|YP_977121.1| - 7.8e-30 104.1 4.3 1.2e-29 103.4 4.3 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121636898|ref|YP_977121.1| - 3.1e-28 98.7 1.5 1.2e-27 96.8 0.2 2.2 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636898|ref|YP_977121.1| - 7.8e-19 67.7 0.0 1.6e-18 66.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121636898|ref|YP_977121.1| - 1.2e-09 38.6 4.7 2.2e-09 37.7 4.7 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain CPSase_L_D2 PF02786.17 gi|121636899|ref|YP_977122.1| - 1.1e-56 191.7 0.0 2e-56 190.9 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|121636899|ref|YP_977122.1| - 1.6e-39 134.9 0.1 2.7e-39 134.1 0.1 1.4 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|121636899|ref|YP_977122.1| - 8.7e-28 96.6 0.0 4.9e-27 94.1 0.0 2.2 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 gi|121636899|ref|YP_977122.1| - 3.6e-18 65.2 0.3 9.8e-18 63.8 0.3 1.8 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|121636899|ref|YP_977122.1| - 1e-07 31.6 0.5 0.00014 21.6 0.3 2.9 1 1 1 2 2 2 2 Biotin-lipoyl like Dala_Dala_lig_C PF07478.13 gi|121636899|ref|YP_977122.1| - 3.6e-07 29.9 0.0 6.6e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus HlyD_3 PF13437.6 gi|121636899|ref|YP_977122.1| - 7.3e-05 23.4 1.3 0.049 14.3 0.2 3.5 3 0 0 3 3 3 1 HlyD family secretion protein HlyD_D23 PF16576.5 gi|121636899|ref|YP_977122.1| - 0.00094 18.5 0.3 0.13 11.4 0.1 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATP-grasp_3 PF02655.14 gi|121636899|ref|YP_977122.1| - 0.011 15.8 0.0 0.022 14.8 0.0 1.5 1 1 0 1 1 1 0 ATP-grasp domain Peptidase_M23 PF01551.22 gi|121636899|ref|YP_977122.1| - 0.024 14.9 0.3 0.11 12.7 0.1 2.2 2 0 0 2 2 2 0 Peptidase family M23 Carboxyl_trans PF01039.22 gi|121636900|ref|YP_977123.1| - 3.1e-145 484.6 0.0 3.5e-145 484.4 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain ECH_1 PF00378.20 gi|121636900|ref|YP_977123.1| - 0.11 11.8 0.2 0.4 10.0 0.0 1.9 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase Acyl-CoA_dh_1 PF00441.24 gi|121636901|ref|YP_977124.1| - 2.3e-42 144.7 5.3 3.2e-42 144.3 5.3 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121636901|ref|YP_977124.1| - 9.1e-25 86.7 0.1 1.5e-24 86.0 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121636901|ref|YP_977124.1| - 9.2e-23 81.1 1.2 2.8e-22 79.5 0.1 2.4 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121636901|ref|YP_977124.1| - 1.6e-14 54.4 4.0 2.8e-14 53.5 4.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Hpt PF01627.23 gi|121636901|ref|YP_977124.1| - 0.099 12.9 0.0 0.3 11.4 0.0 1.8 2 0 0 2 2 2 0 Hpt domain AtuA PF07287.11 gi|121636902|ref|YP_977125.1| - 7.1e-130 432.8 0.0 9.2e-130 432.4 0.0 1.1 1 0 0 1 1 1 1 Acyclic terpene utilisation family protein AtuA sCache_3_2 PF17203.4 gi|121636902|ref|YP_977125.1| - 0.019 15.1 0.1 0.05 13.7 0.1 1.7 1 1 0 1 1 1 0 Single cache domain 3 PE PF00934.20 gi|121636903|ref|YP_977126.1| - 6.2e-29 100.2 12.6 9.4e-29 99.6 12.6 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636903|ref|YP_977126.1| - 0.12 12.9 3.3 0.2 12.1 3.3 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PE PF00934.20 gi|121636904|ref|YP_977127.1| - 9.2e-30 102.8 19.7 2.3e-29 101.5 19.7 1.7 1 0 0 1 1 1 1 PE family NHL PF01436.21 gi|121636904|ref|YP_977127.1| - 1.1e-13 50.4 11.2 9.3e-07 28.6 0.8 3.4 3 0 0 3 3 3 3 NHL repeat SGL PF08450.12 gi|121636904|ref|YP_977127.1| - 0.00054 19.6 0.9 0.1 12.2 0.0 2.7 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Kelch_3 PF13415.6 gi|121636904|ref|YP_977127.1| - 0.016 15.5 4.8 4.3 7.7 0.4 3.8 2 1 1 3 3 3 0 Galactose oxidase, central domain DUF2884 PF11101.8 gi|121636904|ref|YP_977127.1| - 0.14 11.6 0.2 0.21 11.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) Ribosomal_L32p PF01783.23 gi|121636906|ref|YP_977129.1| - 2e-11 44.0 3.9 2.3e-11 43.8 3.9 1.0 1 0 0 1 1 1 1 Ribosomal L32p protein family N36 PF11438.8 gi|121636906|ref|YP_977129.1| - 0.002 17.9 0.7 0.0033 17.2 0.7 1.5 1 0 0 1 1 1 1 36-mer N-terminal peptide of the N protein (N36) PE PF00934.20 gi|121636907|ref|YP_977130.1| - 7.9e-30 103.0 21.3 1.6e-29 102.1 21.3 1.5 1 0 0 1 1 1 1 PE family NHL PF01436.21 gi|121636907|ref|YP_977130.1| - 1.8e-15 56.1 16.6 2.4e-06 27.3 0.6 4.4 4 0 0 4 4 4 4 NHL repeat Kelch_3 PF13415.6 gi|121636907|ref|YP_977130.1| - 5.1e-05 23.4 6.5 2.2 8.7 0.1 4.6 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_1 PF01344.25 gi|121636907|ref|YP_977130.1| - 0.00074 19.0 0.6 8 6.1 0.0 4.0 3 0 0 3 3 3 2 Kelch motif Arylesterase PF01731.20 gi|121636907|ref|YP_977130.1| - 0.079 13.2 0.3 9.1 6.6 0.0 3.0 3 1 1 4 4 4 0 Arylesterase DUF2884 PF11101.8 gi|121636907|ref|YP_977130.1| - 0.2 11.1 0.2 0.32 10.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) Response_reg PF00072.24 gi|121636908|ref|YP_977131.1| - 1.5e-31 108.8 0.0 2.1e-31 108.4 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636908|ref|YP_977131.1| - 6.4e-26 90.2 0.1 2.2e-25 88.5 0.1 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 gi|121636908|ref|YP_977131.1| - 0.0014 19.0 0.0 0.0019 18.6 0.0 1.2 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ OKR_DC_1_N PF03709.15 gi|121636908|ref|YP_977131.1| - 0.004 17.4 0.0 0.0068 16.7 0.0 1.3 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain HATPase_c PF02518.26 gi|121636909|ref|YP_977132.1| - 2.1e-20 73.3 0.0 3.6e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|121636909|ref|YP_977132.1| - 9.2e-13 48.4 1.7 2.4e-12 47.0 1.7 1.8 1 0 0 1 1 1 1 HAMP domain HisKA PF00512.25 gi|121636909|ref|YP_977132.1| - 1.8e-11 43.9 0.2 4.6e-11 42.6 0.2 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain Trypsin_2 PF13365.6 gi|121636910|ref|YP_977133.1| - 2.7e-34 119.2 3.7 2.7e-34 119.2 3.7 2.5 3 1 0 3 3 3 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|121636910|ref|YP_977133.1| - 1.4e-15 57.3 1.2 3e-15 56.3 1.2 1.6 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|121636910|ref|YP_977133.1| - 1.7e-13 50.9 0.1 1.7e-13 50.9 0.1 1.8 2 0 0 2 2 2 1 Trypsin PDZ_6 PF17820.1 gi|121636910|ref|YP_977133.1| - 4.3e-06 26.5 1.1 1.3e-05 25.0 1.1 1.9 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|121636910|ref|YP_977133.1| - 5.3e-06 26.7 0.3 1.5e-05 25.3 0.3 1.8 1 0 0 1 1 1 1 PDZ domain Peptidase_S46 PF10459.9 gi|121636910|ref|YP_977133.1| - 0.00062 18.6 1.3 0.66 8.5 0.0 2.1 2 0 0 2 2 2 2 Peptidase S46 Tricorn_PDZ PF14685.6 gi|121636910|ref|YP_977133.1| - 0.025 14.6 0.3 0.084 12.9 0.3 2.0 1 0 0 1 1 1 0 Tricorn protease PDZ domain PDZ_1 PF12812.7 gi|121636910|ref|YP_977133.1| - 0.1 12.6 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 PDZ-like domain MoCF_biosynth PF00994.24 gi|121636911|ref|YP_977134.1| - 4.1e-24 84.9 1.9 5.9e-24 84.4 1.9 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain NAD_binding_2 PF03446.15 gi|121636911|ref|YP_977134.1| - 0.75 10.0 4.4 1.1 9.4 0.3 2.1 1 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase MscL PF01741.18 gi|121636912|ref|YP_977135.1| - 2.7e-33 114.8 1.9 3.1e-33 114.6 1.9 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL ABC_tran PF00005.27 gi|121636913|ref|YP_977136.1| - 2.8e-35 121.8 0.0 5.3e-35 120.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|121636913|ref|YP_977136.1| - 1.7e-06 28.0 0.0 2.8e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 gi|121636913|ref|YP_977136.1| - 1.5e-05 24.5 0.0 0.011 15.2 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|121636913|ref|YP_977136.1| - 2.4e-05 24.3 0.9 0.029 14.2 0.5 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|121636913|ref|YP_977136.1| - 5.1e-05 22.9 0.1 0.0001 22.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|121636913|ref|YP_977136.1| - 0.00016 22.1 0.1 0.00028 21.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|121636913|ref|YP_977136.1| - 0.0015 19.1 0.2 0.0023 18.5 0.2 1.4 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|121636913|ref|YP_977136.1| - 0.0045 17.1 0.0 0.0074 16.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|121636913|ref|YP_977136.1| - 0.0059 16.2 0.0 0.057 13.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain G-alpha PF00503.20 gi|121636913|ref|YP_977136.1| - 0.012 14.8 0.0 0.014 14.6 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Dynamin_N PF00350.23 gi|121636913|ref|YP_977136.1| - 0.013 15.6 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 0 Dynamin family NACHT PF05729.12 gi|121636913|ref|YP_977136.1| - 0.038 13.9 0.2 0.17 11.8 0.1 1.9 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 gi|121636913|ref|YP_977136.1| - 0.039 13.7 0.0 0.2 11.4 0.0 2.0 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.12 gi|121636913|ref|YP_977136.1| - 0.054 12.8 0.0 0.41 9.9 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 gi|121636913|ref|YP_977136.1| - 0.12 12.6 0.1 0.38 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain FeoB_N PF02421.18 gi|121636913|ref|YP_977136.1| - 0.13 11.7 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B DLIC PF05783.11 gi|121636913|ref|YP_977136.1| - 0.15 10.8 0.0 0.21 10.3 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NB-ARC PF00931.22 gi|121636913|ref|YP_977136.1| - 0.15 11.2 0.0 0.28 10.3 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_13 PF13166.6 gi|121636913|ref|YP_977136.1| - 0.17 10.5 0.0 0.26 9.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|121636913|ref|YP_977136.1| - 0.21 11.3 0.1 4.2 7.0 0.1 2.0 1 1 1 2 2 2 0 AAA ATPase domain FtsX PF02687.21 gi|121636914|ref|YP_977137.1| - 4.6e-20 71.9 18.0 4.4e-12 46.3 4.9 6.3 6 1 1 7 7 7 2 FtsX-like permease family MacB_PCD PF12704.7 gi|121636914|ref|YP_977137.1| - 1.6e-15 58.0 11.3 9e-13 49.0 0.8 2.9 3 0 0 3 3 3 2 MacB-like periplasmic core domain CrtC PF07143.11 gi|121636915|ref|YP_977138.1| - 1.1e-53 182.3 1.0 6.4e-53 179.8 0.8 1.9 2 0 0 2 2 2 1 CrtC N-terminal lipocalin domain Lipocalin_9 PF17186.4 gi|121636915|ref|YP_977138.1| - 6.9e-41 139.6 0.3 1.6e-40 138.4 0.1 1.7 2 0 0 2 2 2 1 Lipocalin-like domain polyprenyl_synt PF00348.17 gi|121636916|ref|YP_977139.1| - 1.1e-40 139.3 0.0 1.4e-40 139.0 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase SAF PF08666.12 gi|121636917|ref|YP_977140.1| - 2e-10 41.2 0.2 4.8e-10 39.9 0.2 1.6 1 0 0 1 1 1 1 SAF domain ChapFlgA PF13144.6 gi|121636917|ref|YP_977140.1| - 1.3e-07 31.7 0.1 4.1e-07 30.1 0.0 1.9 2 0 0 2 2 2 1 Chaperone for flagella basal body P-ring formation Zn-ribbon_8 PF09723.10 gi|121636918|ref|YP_977141.1| - 3.9e-14 52.5 0.7 5.8e-14 51.9 0.7 1.3 1 0 0 1 1 1 1 Zinc ribbon domain Apt1 PF10351.9 gi|121636918|ref|YP_977141.1| - 1.9 7.2 7.2 2.1 7.1 7.2 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain RAP1 PF07218.11 gi|121636918|ref|YP_977141.1| - 2 6.6 9.9 1.6 6.9 9.9 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) 5-FTHF_cyc-lig PF01812.20 gi|121636919|ref|YP_977142.1| - 1.5e-44 152.1 0.0 1.7e-44 151.9 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family NTP_transferase PF00483.23 gi|121636920|ref|YP_977143.1| - 3e-26 92.5 0.0 3.8e-26 92.2 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|121636920|ref|YP_977143.1| - 9e-07 29.4 3.4 1.8e-06 28.4 3.4 1.7 1 1 0 1 1 1 1 MobA-like NTP transferase domain Imm75 PF15660.6 gi|121636920|ref|YP_977143.1| - 0.051 13.8 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Putative Immunity protein 75 MoeA_N PF03453.17 gi|121636921|ref|YP_977144.1| - 5.2e-38 130.3 5.9 5.2e-38 130.3 5.9 1.6 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoeA_C PF03454.15 gi|121636921|ref|YP_977144.1| - 3.8e-20 71.8 0.1 2.2e-19 69.4 0.1 2.3 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) MoCF_biosynth PF00994.24 gi|121636921|ref|YP_977144.1| - 1.6e-19 70.0 0.2 3.1e-19 69.0 0.2 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain V_ATPase_prox PF18274.1 gi|121636921|ref|YP_977144.1| - 0.18 11.8 0.6 0.39 10.7 0.0 1.9 2 0 0 2 2 2 0 Vacuolar ATPase Subunit I N-terminal proximal lobe Acetyltransf_3 PF13302.7 gi|121636922|ref|YP_977145.1| - 5.3e-12 46.6 0.0 7e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121636922|ref|YP_977145.1| - 6.1e-05 23.2 0.0 8.7e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|121636922|ref|YP_977145.1| - 0.00032 20.9 0.0 0.00037 20.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Bacteriocin_IIc PF10439.9 gi|121636922|ref|YP_977145.1| - 2.1 8.5 6.3 3.8 7.7 6.3 1.4 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide cNMP_binding PF00027.29 gi|121636927|ref|YP_977150.1| - 1.9e-14 53.5 0.0 4.2e-14 52.4 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Acetyltransf_3 PF13302.7 gi|121636927|ref|YP_977150.1| - 2.8e-06 28.0 0.0 4.4e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121636927|ref|YP_977150.1| - 0.00034 21.0 0.0 0.0019 18.6 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121636927|ref|YP_977150.1| - 0.00068 19.9 0.1 0.0015 18.7 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|121636927|ref|YP_977150.1| - 0.048 13.6 0.0 0.13 12.2 0.0 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF5642 PF18702.1 gi|121636928|ref|YP_977151.1| - 5.6e-74 247.9 4.3 8e-70 234.4 1.4 2.0 2 0 0 2 2 2 2 Domain of unknown function (DUF5642) 2OG-FeII_Oxy_2 PF13532.6 gi|121636929|ref|YP_977152.1| - 3.5e-15 56.7 0.0 5.5e-15 56.1 0.0 1.4 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 gi|121636929|ref|YP_977152.1| - 0.0096 16.4 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Amidinotransf PF02274.17 gi|121636930|ref|YP_977153.1| - 1.4e-103 346.6 0.0 1.6e-103 346.4 0.0 1.0 1 0 0 1 1 1 1 Amidinotransferase PMT_4TMC PF16192.5 gi|121636931|ref|YP_977154.1| - 5.5e-18 65.3 25.4 2.9e-17 62.9 11.5 3.5 3 1 0 3 3 3 2 C-terminal four TMM region of protein-O-mannosyltransferase PMT PF02366.18 gi|121636931|ref|YP_977154.1| - 2.5e-17 63.3 14.6 9.6e-13 48.3 15.3 3.6 1 1 1 2 2 2 2 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT_2 PF13231.6 gi|121636931|ref|YP_977154.1| - 5.9e-08 33.1 2.0 5.9e-08 33.1 2.0 3.3 3 1 0 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase TP_methylase PF00590.20 gi|121636932|ref|YP_977155.1| - 2.4e-24 86.5 2.9 3.5e-24 85.9 2.9 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF4245 PF14030.6 gi|121636932|ref|YP_977155.1| - 0.062 13.3 0.7 1.3 9.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4245) HHH_5 PF14520.6 gi|121636933|ref|YP_977156.1| - 1.1 9.9 0.0 1.1 9.9 0.0 3.6 3 1 0 3 3 3 0 Helix-hairpin-helix domain Chorismate_bind PF00425.18 gi|121636934|ref|YP_977157.1| - 4.5e-67 226.3 0.0 5.8e-67 226.0 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme DUF4832 PF16116.5 gi|121636935|ref|YP_977158.1| - 8.4e-06 25.8 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4832) Glyco_hydro_42 PF02449.15 gi|121636935|ref|YP_977158.1| - 0.13 11.6 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase tRNA-synt_1g PF09334.11 gi|121636936|ref|YP_977159.1| - 2.6e-106 355.7 0.0 6.9e-63 212.7 0.0 2.0 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|121636936|ref|YP_977159.1| - 1.2e-26 93.2 0.0 3.5e-14 52.0 0.0 3.3 1 1 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|121636936|ref|YP_977159.1| - 6.8e-12 45.3 0.0 9e-06 25.2 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 gi|121636936|ref|YP_977159.1| - 0.00043 20.3 0.0 0.0008 19.4 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|121636936|ref|YP_977159.1| - 0.0021 17.1 0.0 0.27 10.1 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) TatD_DNase PF01026.21 gi|121636937|ref|YP_977160.1| - 5.8e-70 235.6 0.0 6.6e-70 235.4 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 gi|121636937|ref|YP_977160.1| - 0.00031 20.2 0.5 0.00088 18.7 0.3 1.9 2 1 0 2 2 2 1 Amidohydrolase family AP_endonuc_2 PF01261.24 gi|121636937|ref|YP_977160.1| - 0.059 12.8 1.6 2.1 7.7 0.1 2.3 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel Transglycosylas PF06737.14 gi|121636938|ref|YP_977161.1| - 3.7e-35 120.4 5.0 7.4e-35 119.4 5.0 1.5 1 0 0 1 1 1 1 Transglycosylase-like domain DUF348 PF03990.14 gi|121636938|ref|YP_977161.1| - 3.6e-23 81.0 7.5 1.7e-07 30.9 1.4 3.5 3 0 0 3 3 3 3 G5-linked-Ubiquitin-like domain G5 PF07501.12 gi|121636938|ref|YP_977161.1| - 8e-17 61.4 1.4 1.7e-16 60.4 1.4 1.6 1 0 0 1 1 1 1 G5 domain RrnaAD PF00398.20 gi|121636939|ref|YP_977162.1| - 6.1e-39 133.7 0.0 7.5e-39 133.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|121636939|ref|YP_977162.1| - 8.5e-05 23.2 0.0 0.00017 22.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121636939|ref|YP_977162.1| - 0.0013 19.4 0.0 0.0022 18.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121636939|ref|YP_977162.1| - 0.0043 17.7 0.0 0.0095 16.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121636939|ref|YP_977162.1| - 0.0045 16.8 0.0 0.011 15.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|121636939|ref|YP_977162.1| - 0.15 11.8 0.1 0.21 11.3 0.1 1.2 1 0 0 1 1 1 0 Met-10+ like-protein GHMP_kinases_C PF08544.13 gi|121636940|ref|YP_977163.1| - 1e-08 35.4 1.1 2.9e-08 34.0 1.1 1.8 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|121636940|ref|YP_977163.1| - 2e-08 34.3 0.3 2e-08 34.3 0.3 2.2 2 1 0 2 2 2 1 GHMP kinases N terminal domain AMP-binding PF00501.28 gi|121636942|ref|YP_977165.1| - 8.6e-66 222.3 0.1 1.1e-65 221.9 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|121636942|ref|YP_977165.1| - 1.8e-06 28.1 0.0 3.2e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Pept_tRNA_hydro PF01195.19 gi|121636943|ref|YP_977166.1| - 3.2e-58 196.5 0.0 3.6e-58 196.3 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Ribosomal_L25p PF01386.19 gi|121636944|ref|YP_977167.1| - 3.5e-23 81.9 0.1 7.1e-23 80.9 0.1 1.5 1 0 0 1 1 1 1 Ribosomal L25p family Ribosomal_TL5_C PF14693.6 gi|121636944|ref|YP_977167.1| - 3.9e-16 59.2 3.6 7.2e-16 58.3 3.6 1.4 1 0 0 1 1 1 1 Ribosomal protein TL5, C-terminal domain Lpp-LpqN PF10738.9 gi|121636945|ref|YP_977168.1| - 3.3e-48 163.5 0.0 4.6e-48 163.0 0.0 1.2 1 0 0 1 1 1 1 Probable lipoprotein LpqN EP400_N PF15790.5 gi|121636945|ref|YP_977168.1| - 0.13 11.1 1.9 0.18 10.6 1.9 1.2 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal Pribosyltran_N PF13793.6 gi|121636946|ref|YP_977169.1| - 5.7e-46 155.2 0.0 1.4e-45 153.9 0.0 1.6 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 gi|121636946|ref|YP_977169.1| - 5.3e-21 75.5 0.2 2.3e-20 73.4 0.1 2.0 2 1 1 3 3 3 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 gi|121636946|ref|YP_977169.1| - 1.4e-18 67.0 0.2 5.1e-18 65.1 0.1 2.0 2 0 0 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121636946|ref|YP_977169.1| - 2.2e-05 24.0 0.0 3.6e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|121636946|ref|YP_977169.1| - 0.18 11.3 0.1 0.51 9.8 0.0 1.8 2 1 0 2 2 2 0 Phosphoribosyl transferase Hexapep PF00132.24 gi|121636947|ref|YP_977170.1| - 9.6e-22 75.8 6.7 3.6e-05 23.3 0.1 5.0 3 2 2 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|121636947|ref|YP_977170.1| - 2.3e-20 73.6 7.1 3.9e-20 72.8 4.8 2.3 2 1 0 2 2 2 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|121636947|ref|YP_977170.1| - 5.4e-17 62.2 0.0 7.4e-17 61.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 gi|121636947|ref|YP_977170.1| - 3.5e-11 43.3 3.6 3.5e-11 43.3 3.6 2.2 2 1 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 gi|121636947|ref|YP_977170.1| - 7.1e-09 35.3 6.8 0.045 13.5 0.1 5.7 5 1 1 6 6 6 4 Hexapeptide repeat of succinyl-transferase CTP_transf_3 PF02348.19 gi|121636947|ref|YP_977170.1| - 0.052 13.5 0.0 0.12 12.2 0.0 1.5 1 1 0 1 1 1 0 Cytidylyltransferase TetR_N PF00440.23 gi|121636948|ref|YP_977171.1| - 3e-17 62.1 0.1 5.1e-17 61.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_40 PF14493.6 gi|121636948|ref|YP_977171.1| - 0.033 14.6 0.0 0.5 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain CarD_CdnL_TRCF PF02559.16 gi|121636949|ref|YP_977172.1| - 2.8e-28 98.4 0.0 6.6e-28 97.3 0.0 1.7 1 0 0 1 1 1 1 CarD-like/TRCF domain TRCF PF03461.15 gi|121636949|ref|YP_977172.1| - 6.6e-23 80.9 0.0 3.1e-21 75.5 0.0 3.0 3 0 0 3 3 3 1 TRCF domain UvrB_inter PF17757.1 gi|121636949|ref|YP_977172.1| - 2.5e-19 69.3 0.0 5.9e-19 68.0 0.0 1.7 1 0 0 1 1 1 1 UvrB interaction domain DEAD PF00270.29 gi|121636949|ref|YP_977172.1| - 4.3e-16 59.2 0.1 9.1e-16 58.1 0.1 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121636949|ref|YP_977172.1| - 5.6e-16 58.9 0.4 4.1e-14 52.9 0.1 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|121636949|ref|YP_977172.1| - 0.00023 21.2 0.0 0.00081 19.4 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit LSDAT_prok PF18171.1 gi|121636949|ref|YP_977172.1| - 0.022 14.0 0.1 0.73 9.0 0.0 3.1 3 0 0 3 3 3 0 SLOG in TRPM, prokaryote AAA_22 PF13401.6 gi|121636949|ref|YP_977172.1| - 0.11 12.8 0.1 1.6 9.0 0.1 2.7 2 1 0 2 2 2 0 AAA domain MazG PF03819.17 gi|121636950|ref|YP_977173.1| - 2.7e-24 85.1 0.0 5.4e-24 84.2 0.0 1.5 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|121636950|ref|YP_977173.1| - 0.015 15.8 0.1 0.032 14.7 0.1 1.6 1 0 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase SLT_2 PF13406.6 gi|121636951|ref|YP_977174.1| - 1.2e-06 28.0 5.3 1.6e-05 24.3 0.5 2.6 1 1 1 2 2 2 2 Transglycosylase SLT domain SLT PF01464.20 gi|121636951|ref|YP_977174.1| - 0.00067 19.3 0.0 0.0017 18.0 0.0 1.7 1 1 0 1 1 1 1 Transglycosylase SLT domain Enolase_C PF00113.22 gi|121636952|ref|YP_977175.1| - 1.3e-124 415.3 0.0 1.7e-124 414.9 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|121636952|ref|YP_977175.1| - 3.8e-56 188.9 0.0 6.1e-56 188.2 0.0 1.3 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|121636952|ref|YP_977175.1| - 1.1e-10 41.4 0.1 1.8e-10 40.8 0.1 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|121636952|ref|YP_977175.1| - 0.0076 15.4 0.0 0.012 14.8 0.0 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus DivIC PF04977.15 gi|121636953|ref|YP_977176.1| - 5.4e-19 67.7 0.0 8e-19 67.2 0.0 1.3 1 0 0 1 1 1 1 Septum formation initiator DUF501 PF04417.12 gi|121636954|ref|YP_977177.1| - 5.1e-35 120.3 0.0 2.3e-33 114.9 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF501) Imm2 PF14426.6 gi|121636954|ref|YP_977177.1| - 0.15 12.2 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Immunity protein Imm2 Ppx-GppA PF02541.16 gi|121636955|ref|YP_977178.1| - 1.3e-91 307.0 0.1 1.5e-91 306.8 0.1 1.0 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DDR PF08841.10 gi|121636955|ref|YP_977178.1| - 0.0025 16.8 2.9 0.0055 15.7 2.4 1.7 1 1 1 2 2 2 1 Diol dehydratase reactivase ATPase-like domain FtsA PF14450.6 gi|121636955|ref|YP_977178.1| - 0.005 17.2 0.1 1.3 9.4 0.0 2.5 2 0 0 2 2 2 2 Cell division protein FtsA MSP1_C PF07462.11 gi|121636955|ref|YP_977178.1| - 0.17 10.6 0.0 0.22 10.2 0.0 1.1 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus Response_reg PF00072.24 gi|121636956|ref|YP_977179.1| - 1.1e-26 93.1 0.0 1.7e-26 92.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636956|ref|YP_977179.1| - 1e-22 80.0 0.0 3.4e-22 78.3 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Lipase_GDSL_2 PF13472.6 gi|121636956|ref|YP_977179.1| - 0.023 15.1 0.0 0.041 14.3 0.0 1.5 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family KdpD PF02702.17 gi|121636957|ref|YP_977180.1| - 4.9e-98 326.7 0.6 1.1e-97 325.6 0.6 1.6 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain DUF4118 PF13493.6 gi|121636957|ref|YP_977180.1| - 7.5e-24 83.6 9.0 1.6e-23 82.5 9.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4118) HATPase_c PF02518.26 gi|121636957|ref|YP_977180.1| - 2.7e-19 69.7 0.0 6.5e-19 68.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121636957|ref|YP_977180.1| - 2.8e-13 49.7 0.9 1.2e-12 47.6 0.9 2.3 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain Usp PF00582.26 gi|121636957|ref|YP_977180.1| - 3.5e-11 43.8 5.1 4.2e-11 43.5 0.5 3.4 2 1 0 2 2 2 1 Universal stress protein family Thia_YuaJ PF09515.10 gi|121636957|ref|YP_977180.1| - 0.02 15.0 1.0 0.037 14.1 1.0 1.3 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) DUF2631 PF10939.8 gi|121636957|ref|YP_977180.1| - 0.037 13.9 0.1 0.1 12.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Antimicrobial_1 PF08018.11 gi|121636957|ref|YP_977180.1| - 0.043 14.0 0.8 0.13 12.5 0.8 1.8 1 0 0 1 1 1 0 Frog antimicrobial peptide GtrA PF04138.14 gi|121636957|ref|YP_977180.1| - 8.2 6.7 6.6 0.39 11.0 1.1 1.7 2 0 0 2 2 2 0 GtrA-like protein Potass_KdpF PF09604.10 gi|121636958|ref|YP_977181.1| - 3.4e-09 36.4 5.0 3.7e-09 36.3 5.0 1.0 1 0 0 1 1 1 1 F subunit of K+-transporting ATPase (Potass_KdpF) KdpA PF03814.15 gi|121636959|ref|YP_977182.1| - 1.5e-237 789.2 23.8 1.7e-237 789.0 23.8 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit E1-E2_ATPase PF00122.20 gi|121636960|ref|YP_977183.1| - 1.2e-35 122.6 4.2 1.2e-35 122.6 4.2 2.4 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121636960|ref|YP_977183.1| - 3.6e-31 109.1 3.0 3.6e-31 109.1 3.0 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121636960|ref|YP_977183.1| - 0.0021 17.9 0.4 0.0046 16.7 0.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121636960|ref|YP_977183.1| - 0.036 14.5 0.0 0.28 11.6 0.0 2.4 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF759 PF05537.11 gi|121636960|ref|YP_977183.1| - 0.15 10.9 0.0 0.28 10.0 0.0 1.3 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF759) KdpC PF02669.15 gi|121636961|ref|YP_977184.1| - 1.1e-73 246.9 0.0 1.3e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain HATPase_c PF02518.26 gi|121636962|ref|YP_977185.1| - 8.2e-23 81.1 0.0 3e-22 79.2 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121636962|ref|YP_977185.1| - 4.9e-17 61.7 2.5 8.6e-17 60.9 0.8 2.3 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121636962|ref|YP_977185.1| - 3e-08 33.9 0.1 1e-07 32.2 0.1 2.0 1 0 0 1 1 1 1 HAMP domain HATPase_c_2 PF13581.6 gi|121636962|ref|YP_977185.1| - 0.00023 21.1 0.0 0.00098 19.1 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|121636962|ref|YP_977185.1| - 0.0038 17.1 0.0 0.0097 15.8 0.0 1.7 1 1 0 1 1 1 1 GHKL domain Neurensin PF14927.6 gi|121636962|ref|YP_977185.1| - 0.053 13.2 0.3 3 7.5 0.1 2.3 2 0 0 2 2 2 0 Neurensin FixQ PF05545.11 gi|121636962|ref|YP_977185.1| - 0.12 12.4 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF3040 PF11239.8 gi|121636962|ref|YP_977185.1| - 0.39 11.0 10.7 0.29 11.4 0.5 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF4307 PF14155.6 gi|121636962|ref|YP_977185.1| - 4.2 7.2 8.3 2.1 8.2 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) Response_reg PF00072.24 gi|121636963|ref|YP_977186.1| - 3.3e-27 94.9 0.1 4.8e-27 94.4 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121636963|ref|YP_977186.1| - 7.8e-27 93.2 0.1 1e-25 89.6 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal DDE_Tnp_1 PF01609.21 gi|121636964|ref|YP_977187.1| - 6.4e-07 29.2 0.1 2e-06 27.6 0.1 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|121636964|ref|YP_977187.1| - 3.4e-06 27.3 0.0 5.2e-06 26.7 0.0 1.2 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|121636964|ref|YP_977187.1| - 0.0044 17.4 0.5 0.0067 16.8 0.5 1.2 1 0 0 1 1 1 1 Transposase DDE domain Glycos_trans_3N PF02885.17 gi|121636965|ref|YP_977188.1| - 0.065 13.1 0.2 0.065 13.1 0.2 2.6 4 0 0 4 4 4 0 Glycosyl transferase family, helical bundle domain APG17 PF04108.12 gi|121636965|ref|YP_977188.1| - 0.25 10.4 1.7 0.41 9.7 1.7 1.2 1 0 0 1 1 1 0 Autophagy protein Apg17 Apolipoprotein PF01442.18 gi|121636965|ref|YP_977188.1| - 1.1 9.1 15.6 2.8 7.8 15.7 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF772 PF05598.11 gi|121636966|ref|YP_977189.1| - 0.002 18.1 0.0 0.0038 17.2 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) WXG100 PF06013.12 gi|121636967|ref|YP_977190.1| - 1.7e-13 50.6 1.2 1.9e-13 50.4 1.2 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG HrpB7 PF09486.10 gi|121636967|ref|YP_977190.1| - 0.11 12.9 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) WXG100 PF06013.12 gi|121636968|ref|YP_977191.1| - 1.3e-19 70.2 3.1 1.4e-19 70.1 3.1 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 gi|121636968|ref|YP_977191.1| - 0.087 13.3 2.7 0.1 13.1 2.7 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PPE PF00823.19 gi|121636969|ref|YP_977192.1| - 1.7e-59 200.5 34.7 1.7e-59 200.5 34.7 2.9 2 1 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121636969|ref|YP_977192.1| - 2.2e-21 76.5 17.8 2.2e-21 76.5 17.8 5.5 4 1 0 4 4 4 1 Polymorphic PE/PPE proteins C terminal PE PF00934.20 gi|121636970|ref|YP_977193.1| - 1.8e-28 98.7 13.9 1.8e-28 98.7 13.9 2.9 3 1 0 3 3 3 1 PE family PE_PPE_C PF12484.8 gi|121636970|ref|YP_977193.1| - 2.1e-18 67.0 18.1 2.1e-18 67.0 18.1 4.1 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal DUF4096 PF13340.6 gi|121636971|ref|YP_977194.1| - 2.3e-27 95.0 1.8 3.1e-27 94.6 1.8 1.2 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) Trypsin_2 PF13365.6 gi|121636972|ref|YP_977195.1| - 7.4e-18 65.9 0.4 1.1e-17 65.3 0.4 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|121636972|ref|YP_977195.1| - 1.6e-07 31.4 0.0 2.7e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Trypsin DUF2292 PF10055.9 gi|121636972|ref|YP_977195.1| - 0.38 10.4 0.8 54 3.5 0.0 3.0 3 0 0 3 3 3 0 Uncharacterized small protein (DUF2292) AbiEi_4 PF13338.6 gi|121636973|ref|YP_977196.1| - 2.6e-13 49.9 1.3 2.6e-13 49.9 1.3 2.7 3 0 0 3 3 3 1 Transcriptional regulator, AbiEi antitoxin AbiEii PF08843.11 gi|121636974|ref|YP_977197.1| - 3.2e-16 60.0 0.1 3.9e-16 59.7 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system Transposase_mut PF00872.18 gi|121636976|ref|YP_977199.1| - 1.4e-154 514.6 0.0 1.6e-154 514.4 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121636976|ref|YP_977199.1| - 2e-05 24.9 0.0 5.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain MarR_2 PF12802.7 gi|121636978|ref|YP_977201.1| - 5.5e-12 45.4 0.5 1e-11 44.5 0.5 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|121636978|ref|YP_977201.1| - 1.2e-06 28.4 0.3 1.8e-06 27.9 0.3 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|121636978|ref|YP_977201.1| - 3.4e-05 24.1 0.1 5.5e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator MarR PF01047.22 gi|121636978|ref|YP_977201.1| - 4.6e-05 23.3 0.3 0.00011 22.0 0.3 1.7 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|121636978|ref|YP_977201.1| - 0.00017 21.1 0.1 0.00035 20.1 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|121636978|ref|YP_977201.1| - 0.00028 20.9 0.2 0.00077 19.5 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|121636978|ref|YP_977201.1| - 0.00051 20.5 0.3 0.00074 20.0 0.3 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 gi|121636978|ref|YP_977201.1| - 0.00085 18.9 0.3 0.0017 18.0 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|121636978|ref|YP_977201.1| - 0.0023 17.7 0.2 0.0051 16.6 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|121636978|ref|YP_977201.1| - 0.015 15.2 0.2 0.078 12.9 0.1 2.0 2 0 0 2 2 2 0 HTH domain TrmB PF01978.19 gi|121636978|ref|YP_977201.1| - 0.023 14.6 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|121636978|ref|YP_977201.1| - 0.03 14.2 0.0 0.051 13.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|121636978|ref|YP_977201.1| - 0.038 14.2 0.1 0.062 13.5 0.1 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Pertussis_S2S3 PF02918.15 gi|121636978|ref|YP_977201.1| - 0.052 13.5 0.1 0.069 13.1 0.1 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain TetR_N PF00440.23 gi|121636978|ref|YP_977201.1| - 0.086 12.7 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family LexA_DNA_bind PF01726.16 gi|121636978|ref|YP_977201.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain adh_short PF00106.25 gi|121636979|ref|YP_977202.1| - 5.9e-52 176.0 0.7 7.8e-52 175.6 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121636979|ref|YP_977202.1| - 9.4e-38 130.1 0.4 1.2e-37 129.7 0.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121636979|ref|YP_977202.1| - 2e-12 47.4 1.3 3.4e-12 46.7 1.3 1.4 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121636979|ref|YP_977202.1| - 0.0021 17.6 0.1 0.0031 17.0 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Herpes_UL56 PF04534.12 gi|121636979|ref|YP_977202.1| - 0.075 12.5 4.6 0.14 11.6 2.1 2.1 2 0 0 2 2 2 0 Herpesvirus UL56 protein DFP PF04127.15 gi|121636979|ref|YP_977202.1| - 0.1 12.4 1.7 0.22 11.3 1.7 1.6 1 1 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein EccE PF11203.8 gi|121636979|ref|YP_977202.1| - 0.81 10.0 5.4 7.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE AbiEii PF08843.11 gi|121636980|ref|YP_977203.1| - 3.1e-13 50.2 0.0 4e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system HTH_17 PF12728.7 gi|121636980|ref|YP_977203.1| - 1.1e-07 31.9 0.0 2e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MerR_1 PF13411.6 gi|121636980|ref|YP_977203.1| - 0.0058 16.7 0.0 0.015 15.4 0.0 1.6 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 gi|121636980|ref|YP_977203.1| - 0.012 15.3 0.0 0.035 13.9 0.0 1.7 1 0 0 1 1 1 0 MerR family regulatory protein NTP_transf_9 PF04248.12 gi|121636985|ref|YP_977208.1| - 8.7e-41 137.7 0.1 7.8e-30 102.6 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF427) Lactonase PF10282.9 gi|121636986|ref|YP_977209.1| - 4.6e-09 36.0 0.5 0.034 13.4 0.0 4.1 2 1 2 4 4 4 4 Lactonase, 7-bladed beta-propeller PD40 PF07676.12 gi|121636986|ref|YP_977209.1| - 1.2e-06 28.3 0.6 4.1 7.5 0.0 5.3 5 0 0 5 5 5 2 WD40-like Beta Propeller Repeat Cytochrom_D1 PF02239.16 gi|121636986|ref|YP_977209.1| - 4.8e-05 22.0 1.3 0.0063 15.1 0.1 3.3 2 2 0 3 3 3 1 Cytochrome D1 heme domain SBP56 PF05694.11 gi|121636986|ref|YP_977209.1| - 0.00067 18.6 0.1 0.038 12.8 0.0 2.8 2 1 1 3 3 3 1 56kDa selenium binding protein (SBP56) WD40 PF00400.32 gi|121636986|ref|YP_977209.1| - 0.0049 17.7 6.1 12 6.9 0.1 5.7 5 1 0 5 5 5 1 WD domain, G-beta repeat AMP-binding PF00501.28 gi|121636987|ref|YP_977210.1| - 6e-97 324.9 0.0 7.6e-97 324.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121636987|ref|YP_977210.1| - 4.7e-18 65.9 0.1 1.1e-17 64.8 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF3659 PF12396.8 gi|121636987|ref|YP_977210.1| - 0.0079 16.1 0.3 0.021 14.7 0.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3659) DUF3701 PF12482.8 gi|121636987|ref|YP_977210.1| - 0.24 11.5 1.4 7 6.8 0.0 3.0 3 0 0 3 3 3 0 Phage integrase protein DapB_N PF01113.20 gi|121636988|ref|YP_977211.1| - 2.2e-06 27.8 0.0 3.6e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Polyketide_cyc2 PF10604.9 gi|121636989|ref|YP_977212.1| - 1.6e-17 64.1 0.9 1.9e-17 63.8 0.9 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121636989|ref|YP_977212.1| - 0.017 15.3 0.1 0.023 14.9 0.1 1.3 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport GATase_4 PF13230.6 gi|121636990|ref|YP_977213.1| - 1.9e-22 79.4 0.0 2.4e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|121636990|ref|YP_977213.1| - 1.3e-08 35.1 0.1 2.3e-08 34.3 0.1 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain Patatin PF01734.22 gi|121636991|ref|YP_977214.1| - 4.9e-18 66.1 6.0 2.3e-17 63.8 6.0 1.9 1 1 0 1 1 1 1 Patatin-like phospholipase Patatin PF01734.22 gi|121636992|ref|YP_977215.1| - 2.4e-16 60.5 10.4 1e-14 55.2 8.4 3.0 2 1 0 2 2 2 1 Patatin-like phospholipase LpqV PF17301.2 gi|121636993|ref|YP_977216.1| - 4e-48 162.4 4.0 4.9e-48 162.1 4.0 1.1 1 0 0 1 1 1 1 Putative lipoprotein LpqV CDO_I PF05995.12 gi|121636994|ref|YP_977217.1| - 6.9e-15 54.8 1.8 1.3e-11 44.1 0.1 2.0 2 0 0 2 2 2 2 Cysteine dioxygenase type I Cupin_2 PF07883.11 gi|121636994|ref|YP_977217.1| - 0.0093 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Auxin_BP PF02041.16 gi|121636994|ref|YP_977217.1| - 0.029 14.0 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Auxin binding protein Rhodanese PF00581.20 gi|121636995|ref|YP_977218.1| - 7.8e-07 29.6 0.0 1.1e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain PE PF00934.20 gi|121636996|ref|YP_977219.1| - 4.3e-32 110.3 22.0 6.9e-32 109.6 22.0 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636996|ref|YP_977219.1| - 2.3 8.7 11.8 4.1 7.9 11.8 1.4 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PE PF00934.20 gi|121636997|ref|YP_977220.1| - 6.4e-33 112.9 13.6 9.3e-33 112.4 13.6 1.2 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121636997|ref|YP_977220.1| - 3.2 8.3 7.6 5.2 7.6 7.6 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Abhydrolase_9 PF10081.9 gi|121636998|ref|YP_977221.1| - 9.7e-131 435.1 1.1 1.2e-130 434.7 1.1 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family Abhydrolase_9_N PF15420.6 gi|121636998|ref|YP_977221.1| - 6.2e-73 245.2 8.1 1.7e-72 243.8 8.1 1.8 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus ECH_1 PF00378.20 gi|121636999|ref|YP_977222.1| - 3.4e-81 272.2 1.1 3.8e-81 272.1 1.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121636999|ref|YP_977222.1| - 4.6e-40 138.1 4.5 2.9e-35 122.3 1.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF218 PF02698.17 gi|121636999|ref|YP_977222.1| - 0.0013 18.8 0.2 0.0028 17.7 0.1 1.6 2 0 0 2 2 2 1 DUF218 domain TetR_C_21 PF17926.1 gi|121636999|ref|YP_977222.1| - 0.17 12.1 0.9 0.28 11.3 0.3 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ECH_2 PF16113.5 gi|121637000|ref|YP_977223.1| - 2.3e-118 395.5 0.0 2.6e-118 395.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 gi|121637000|ref|YP_977223.1| - 2.9e-30 105.4 0.1 5.5e-29 101.2 0.2 2.0 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase BaxI_1 PF12811.7 gi|121637001|ref|YP_977224.1| - 6.2e-85 284.5 13.0 6.7e-85 284.3 13.0 1.0 1 0 0 1 1 1 1 Bax inhibitor 1 like Bax1-I PF01027.20 gi|121637001|ref|YP_977224.1| - 2e-19 70.2 23.5 2.6e-19 69.9 23.5 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 MTES_1575 PF18741.1 gi|121637002|ref|YP_977225.1| - 1.3e-07 31.7 0.0 2.2e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 REase_MTES_1575 DUF559 PF04480.12 gi|121637002|ref|YP_977225.1| - 0.00098 19.0 0.1 0.0017 18.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF559) Thiolase_N PF00108.23 gi|121637003|ref|YP_977226.1| - 7e-63 212.4 0.0 1.3e-62 211.5 0.0 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121637003|ref|YP_977226.1| - 1.4e-48 163.6 0.4 2.8e-48 162.6 0.4 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121637003|ref|YP_977226.1| - 0.00089 18.9 1.4 0.02 14.5 0.1 2.9 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|121637003|ref|YP_977226.1| - 0.0038 17.0 0.1 2.9 7.8 0.0 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Lipase_GDSL_2 PF13472.6 gi|121637004|ref|YP_977227.1| - 1.7e-14 54.6 0.0 2.3e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 gi|121637004|ref|YP_977227.1| - 0.00022 21.3 0.0 0.0019 18.2 0.0 2.3 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Abhydrolase_3 PF07859.13 gi|121637005|ref|YP_977228.1| - 2.3e-43 148.5 0.6 2.9e-43 148.2 0.6 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121637005|ref|YP_977228.1| - 9e-09 34.7 0.0 1.2e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Thioesterase PF00975.20 gi|121637005|ref|YP_977228.1| - 5.1e-05 23.5 0.5 7.7e-05 22.9 0.5 1.4 1 1 0 1 1 1 1 Thioesterase domain Chlorophyllase2 PF12740.7 gi|121637005|ref|YP_977228.1| - 0.00086 18.3 0.0 0.0013 17.7 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Peptidase_S9 PF00326.21 gi|121637005|ref|YP_977228.1| - 0.001 18.6 0.0 0.0084 15.6 0.0 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121637005|ref|YP_977228.1| - 0.0011 18.3 0.0 0.0017 17.7 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2235 PF09994.9 gi|121637005|ref|YP_977228.1| - 0.042 13.2 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized alpha/beta hydrolase domain (DUF2235) UPF0227 PF05728.12 gi|121637005|ref|YP_977228.1| - 0.058 13.3 0.0 0.11 12.4 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0227) BAAT_C PF08840.11 gi|121637005|ref|YP_977228.1| - 0.098 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 gi|121637005|ref|YP_977228.1| - 0.13 11.8 0.0 7 6.1 0.0 2.2 2 0 0 2 2 2 0 Dienelactone hydrolase family PALP PF00291.25 gi|121637006|ref|YP_977229.1| - 1.3e-61 208.6 0.6 1.9e-61 208.1 0.6 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 gi|121637006|ref|YP_977229.1| - 5.3e-16 58.8 0.1 2e-06 28.2 0.0 2.7 2 0 0 2 2 2 2 CBS domain RDD PF06271.12 gi|121637007|ref|YP_977230.1| - 1.4e-22 80.4 3.7 1.7e-22 80.1 3.7 1.1 1 0 0 1 1 1 1 RDD family Cys_Met_Meta_PP PF01053.20 gi|121637008|ref|YP_977231.1| - 1.8e-145 484.3 0.0 2.1e-145 484.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|121637008|ref|YP_977231.1| - 9.7e-10 38.3 0.1 1.9e-09 37.3 0.1 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Met_gamma_lyase PF06838.11 gi|121637008|ref|YP_977231.1| - 6.4e-07 28.2 0.0 1.1e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.19 gi|121637008|ref|YP_977231.1| - 0.00011 21.2 0.0 0.00016 20.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|121637008|ref|YP_977231.1| - 0.043 13.1 0.0 0.14 11.5 0.0 1.7 1 1 0 1 1 1 0 Beta-eliminating lyase GreA_GreB_N PF03449.15 gi|121637009|ref|YP_977232.1| - 4.4e-25 87.6 3.3 6.4e-25 87.1 3.3 1.3 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 gi|121637009|ref|YP_977232.1| - 5.2e-14 51.9 0.2 8.3e-14 51.3 0.2 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term SbcD_C PF12320.8 gi|121637009|ref|YP_977232.1| - 0.11 12.9 0.7 0.17 12.2 0.7 1.3 1 0 0 1 1 1 0 Type 5 capsule protein repressor C-terminal domain DUF4307 PF14155.6 gi|121637010|ref|YP_977233.1| - 1.3e-34 118.4 6.5 1.5e-34 118.1 6.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4307) DUF2371 PF10177.9 gi|121637010|ref|YP_977233.1| - 0.0074 16.5 0.0 0.0088 16.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2371) Neurensin PF14927.6 gi|121637010|ref|YP_977233.1| - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Neurensin RskA PF10099.9 gi|121637010|ref|YP_977233.1| - 0.012 15.9 1.1 0.017 15.4 1.1 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF3040 PF11239.8 gi|121637010|ref|YP_977233.1| - 0.018 15.3 1.1 0.032 14.5 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) TraD PF06412.11 gi|121637010|ref|YP_977233.1| - 0.085 12.7 0.2 0.12 12.3 0.2 1.2 1 0 0 1 1 1 0 Conjugal transfer protein TraD DUF2275 PF10039.9 gi|121637010|ref|YP_977233.1| - 0.09 12.9 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) PIG-L PF02585.17 gi|121637011|ref|YP_977234.1| - 4.3e-26 92.1 0.1 6.4e-26 91.5 0.1 1.3 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase SKG6 PF08693.10 gi|121637012|ref|YP_977235.1| - 0.042 13.3 1.7 0.061 12.7 1.7 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF3504 PF12012.8 gi|121637012|ref|YP_977235.1| - 0.06 13.3 0.0 0.069 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3504) Thioredox_DsbH PF03190.15 gi|121637013|ref|YP_977236.1| - 2.3e-67 226.0 0.0 3.4e-67 225.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|121637013|ref|YP_977236.1| - 2.8e-11 43.4 0.1 7.1e-11 42.1 0.1 1.7 1 0 0 1 1 1 1 Thioredoxin-like GlcNAc_2-epim PF07221.11 gi|121637013|ref|YP_977236.1| - 2.3e-05 23.8 0.5 0.11 11.7 0.1 2.6 2 0 0 2 2 2 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) HlyIII PF03006.20 gi|121637014|ref|YP_977237.1| - 3.8e-42 144.5 16.5 4.6e-42 144.2 16.5 1.0 1 0 0 1 1 1 1 Haemolysin-III related Prenyltransf PF01255.19 gi|121637015|ref|YP_977238.1| - 2e-66 223.7 0.0 2.4e-66 223.5 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase PE PF00934.20 gi|121637016|ref|YP_977239.1| - 3e-36 123.6 21.8 4.8e-36 123.0 21.8 1.3 1 0 0 1 1 1 1 PE family DUF2884 PF11101.8 gi|121637016|ref|YP_977239.1| - 0.23 10.9 0.1 0.32 10.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) Prenyltransf PF01255.19 gi|121637017|ref|YP_977240.1| - 2.9e-07 30.2 0.0 1.1e-06 28.3 0.0 1.9 1 1 0 1 1 1 1 Putative undecaprenyl diphosphate synthase PE PF00934.20 gi|121637018|ref|YP_977241.1| - 3.5e-28 97.8 8.6 5.6e-28 97.1 8.6 1.3 1 0 0 1 1 1 1 PE family CBM_2 PF00553.19 gi|121637019|ref|YP_977242.1| - 0.018 15.3 0.0 0.018 15.3 0.0 2.1 2 1 0 2 2 2 0 Cellulose binding domain Glyco_hydro_12 PF01670.16 gi|121637021|ref|YP_977244.1| - 1.2e-37 130.0 2.5 1.3e-37 129.9 2.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 12 PE PF00934.20 gi|121637022|ref|YP_977245.1| - 1.8e-35 121.1 21.4 3.1e-35 120.4 21.4 1.4 1 0 0 1 1 1 1 PE family PRK PF00485.18 gi|121637023|ref|YP_977246.1| - 1.5e-11 44.4 0.0 2.4e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|121637023|ref|YP_977246.1| - 0.0049 17.4 0.0 0.008 16.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|121637023|ref|YP_977246.1| - 0.024 14.3 0.0 0.2 11.3 0.0 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase SHMT PF00464.19 gi|121637024|ref|YP_977247.1| - 1.8e-157 524.0 0.0 2.2e-157 523.8 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 gi|121637024|ref|YP_977247.1| - 1.6e-05 24.4 0.1 2.6e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SelA PF03841.13 gi|121637024|ref|YP_977247.1| - 0.0078 15.2 0.0 0.014 14.4 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Beta_elim_lyase PF01212.21 gi|121637024|ref|YP_977247.1| - 0.013 14.8 0.3 1.1 8.4 0.0 2.2 2 0 0 2 2 2 0 Beta-eliminating lyase DUF4157 PF13699.6 gi|121637024|ref|YP_977247.1| - 0.097 12.9 0.4 1.5 9.1 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4157) FA_desaturase_2 PF03405.14 gi|121637025|ref|YP_977248.1| - 4.3e-35 121.1 0.1 5.7e-35 120.7 0.1 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Rubrerythrin PF02915.17 gi|121637025|ref|YP_977248.1| - 0.00055 20.3 1.1 0.063 13.7 0.0 1.7 1 1 1 2 2 2 2 Rubrerythrin Ribonuc_red_sm PF00268.21 gi|121637025|ref|YP_977248.1| - 0.093 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, small chain PhoH PF02562.16 gi|121637026|ref|YP_977249.1| - 3.7e-52 176.8 0.0 4.7e-52 176.4 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein PIN_4 PF13638.6 gi|121637026|ref|YP_977249.1| - 2.1e-29 102.5 0.0 3.3e-29 101.8 0.0 1.3 1 0 0 1 1 1 1 PIN domain AAA_30 PF13604.6 gi|121637026|ref|YP_977249.1| - 3.1e-07 30.3 0.1 6.1e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121637026|ref|YP_977249.1| - 0.015 15.6 0.7 0.079 13.2 0.7 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|121637026|ref|YP_977249.1| - 0.021 15.2 0.8 0.054 13.9 0.8 1.7 1 1 0 1 1 1 0 AAA ATPase domain Histone PF00125.24 gi|121637026|ref|YP_977249.1| - 0.046 14.1 0.0 0.081 13.3 0.0 1.3 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 DEAD PF00270.29 gi|121637026|ref|YP_977249.1| - 0.072 12.9 0.0 0.62 9.8 0.0 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase Polysacc_deac_1 PF01522.21 gi|121637027|ref|YP_977250.1| - 9.9e-35 119.1 0.0 7.6e-34 116.3 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide deacetylase Polysacc_deac_2 PF04748.13 gi|121637027|ref|YP_977250.1| - 0.0087 15.3 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase ODV-E18 PF10717.9 gi|121637028|ref|YP_977251.1| - 0.041 13.8 0.1 0.11 12.4 0.1 1.7 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Lyase_1 PF00206.20 gi|121637029|ref|YP_977252.1| - 1.2e-101 340.3 0.0 1.7e-101 339.7 0.0 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|121637029|ref|YP_977252.1| - 1.9e-18 66.6 0.6 6.5e-18 64.9 0.1 2.3 2 0 0 2 2 2 1 Fumarase C C-terminus FBPase_glpX PF03320.13 gi|121637030|ref|YP_977253.1| - 6.1e-139 462.1 5.9 6.9e-139 462.0 5.9 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DUF4245 PF14030.6 gi|121637031|ref|YP_977254.1| - 1.6e-52 177.8 0.0 1.9e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4245) AI-2E_transport PF01594.16 gi|121637032|ref|YP_977255.1| - 2.2e-65 221.0 25.5 2.5e-65 220.8 25.5 1.0 1 0 0 1 1 1 1 AI-2E family transporter PemK_toxin PF02452.17 gi|121637033|ref|YP_977256.1| - 4e-11 43.3 0.1 4.4e-11 43.2 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system UreF PF01730.16 gi|121637034|ref|YP_977257.1| - 0.047 14.3 0.3 0.061 13.9 0.3 1.2 1 0 0 1 1 1 0 UreF COesterase PF00135.28 gi|121637035|ref|YP_977258.1| - 1.4e-69 235.4 0.0 1.7e-69 235.1 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 gi|121637035|ref|YP_977258.1| - 3.6e-11 43.3 0.6 1.8e-05 24.7 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121637035|ref|YP_977258.1| - 0.072 11.9 0.0 0.076 11.9 0.0 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase COesterase PF00135.28 gi|121637036|ref|YP_977259.1| - 2.7e-17 62.8 0.0 3e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family 3Beta_HSD PF01073.19 gi|121637037|ref|YP_977260.1| - 2.8e-58 197.2 0.0 3.5e-58 196.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 gi|121637037|ref|YP_977260.1| - 2e-29 102.8 0.0 2.5e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|121637037|ref|YP_977260.1| - 1.4e-16 60.8 0.0 2.8e-16 59.8 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 gi|121637037|ref|YP_977260.1| - 1.8e-16 60.5 0.1 2.5e-16 60.1 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|121637037|ref|YP_977260.1| - 1.4e-13 50.7 0.4 3.7e-10 39.4 0.4 2.3 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|121637037|ref|YP_977260.1| - 1.5e-12 47.2 0.0 2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|121637037|ref|YP_977260.1| - 1.1e-08 34.6 0.1 4e-07 29.5 0.4 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein KR PF08659.10 gi|121637037|ref|YP_977260.1| - 6.3e-08 32.7 1.9 1.9e-06 27.9 1.9 2.2 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 gi|121637037|ref|YP_977260.1| - 2.6e-07 30.4 0.2 5.1e-07 29.5 0.2 1.4 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|121637037|ref|YP_977260.1| - 0.00076 19.0 0.1 0.0013 18.3 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Exonuc_VII_S PF02609.16 gi|121637038|ref|YP_977261.1| - 1.5e-15 57.0 0.4 1.8e-15 56.7 0.4 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit Exonuc_VII_L PF02601.15 gi|121637039|ref|YP_977262.1| - 6.1e-69 232.9 0.1 1.4e-60 205.4 0.2 2.1 1 1 1 2 2 2 2 Exonuclease VII, large subunit tRNA_anti_2 PF13742.6 gi|121637039|ref|YP_977262.1| - 3.4e-13 49.6 0.0 6.3e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 gi|121637039|ref|YP_977262.1| - 0.00043 20.2 0.0 0.00089 19.2 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Death PF00531.22 gi|121637039|ref|YP_977262.1| - 0.0052 16.9 0.1 0.79 9.9 0.1 2.5 2 0 0 2 2 2 1 Death domain Peptidase_S66 PF02016.15 gi|121637039|ref|YP_977262.1| - 0.035 14.2 0.0 0.087 12.9 0.0 1.6 1 0 0 1 1 1 0 LD-carboxypeptidase N-terminal domain LYTB PF02401.18 gi|121637041|ref|YP_977264.1| - 1.1e-88 296.9 0.1 1.3e-88 296.7 0.1 1.0 1 0 0 1 1 1 1 LytB protein Yip1 PF04893.17 gi|121637042|ref|YP_977265.1| - 0.27 10.9 12.7 0.17 11.6 2.5 2.0 1 1 1 2 2 2 0 Yip1 domain YchF-GTPase_C PF06071.13 gi|121637043|ref|YP_977266.1| - 2.5e-39 133.3 0.1 4.3e-39 132.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 gi|121637043|ref|YP_977266.1| - 1.2e-23 83.4 0.0 2.2e-23 82.5 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|121637043|ref|YP_977266.1| - 6.4e-09 35.5 0.0 1.2e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|121637043|ref|YP_977266.1| - 0.044 13.8 0.0 3.9 7.5 0.0 2.3 1 1 0 2 2 2 0 Dynamin family TGS PF02824.21 gi|121637043|ref|YP_977266.1| - 0.066 13.3 1.0 0.31 11.1 0.6 2.2 2 1 0 2 2 2 0 TGS domain AAA_18 PF13238.6 gi|121637043|ref|YP_977266.1| - 0.19 12.3 0.0 0.57 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain VapB_antitoxin PF09957.9 gi|121637044|ref|YP_977267.1| - 1.8e-12 47.0 2.2 2.1e-12 46.7 2.2 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB PIN PF01850.21 gi|121637045|ref|YP_977268.1| - 2.8e-08 34.3 0.0 3.2e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 PIN domain ABM PF03992.16 gi|121637049|ref|YP_977272.1| - 6.2e-17 61.5 0.6 7.4e-17 61.2 0.6 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Peptidase_C92 PF05708.12 gi|121637050|ref|YP_977273.1| - 0.0058 16.7 0.0 0.099 12.7 0.0 2.3 2 1 0 2 2 2 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Guanylate_cyc PF00211.20 gi|121637052|ref|YP_977275.1| - 8.6e-10 38.5 0.0 1.2e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain G6PD_C PF02781.16 gi|121637053|ref|YP_977276.1| - 1.4e-86 290.3 0.0 1.8e-86 289.9 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 gi|121637053|ref|YP_977276.1| - 2.7e-41 142.1 0.0 4.8e-41 141.3 0.0 1.4 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|121637054|ref|YP_977277.1| - 2e-39 135.3 0.0 2.9e-39 134.8 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 6PGD PF00393.19 gi|121637054|ref|YP_977277.1| - 2.7e-21 76.2 1.0 1.3e-09 37.8 0.4 3.1 2 1 1 3 3 3 3 6-phosphogluconate dehydrogenase, C-terminal domain F420_oxidored PF03807.17 gi|121637054|ref|YP_977277.1| - 4e-06 27.3 0.1 8.6e-06 26.2 0.0 1.6 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|121637054|ref|YP_977277.1| - 3.6e-05 23.2 0.0 5.2e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|121637054|ref|YP_977277.1| - 9.7e-05 22.6 0.1 0.00032 20.9 0.0 1.8 1 1 1 2 2 2 1 TrkA-N domain 3HCDH_N PF02737.18 gi|121637054|ref|YP_977277.1| - 0.00092 19.1 0.1 0.0013 18.6 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|121637054|ref|YP_977277.1| - 0.0061 17.4 0.0 0.012 16.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold UDPG_MGDP_dh_N PF03721.14 gi|121637054|ref|YP_977277.1| - 0.011 15.3 0.1 0.021 14.4 0.0 1.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|121637054|ref|YP_977277.1| - 0.03 14.4 0.0 0.11 12.5 0.0 1.9 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|121637054|ref|YP_977277.1| - 0.041 14.1 0.1 0.35 11.1 0.1 2.3 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_11 PF14833.6 gi|121637054|ref|YP_977277.1| - 0.049 13.9 0.1 0.12 12.6 0.1 1.7 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Rossmann-like PF10727.9 gi|121637054|ref|YP_977277.1| - 0.063 13.1 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Rossmann-like domain PDH PF02153.17 gi|121637054|ref|YP_977277.1| - 0.12 11.3 0.0 0.19 10.7 0.0 1.3 1 0 0 1 1 1 0 Prephenate dehydrogenase Abhydrolase_6 PF12697.7 gi|121637055|ref|YP_977278.1| - 3.3e-14 54.0 4.2 4.2e-14 53.7 4.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121637055|ref|YP_977278.1| - 4.7e-14 52.6 0.0 4.2e-13 49.5 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121637055|ref|YP_977278.1| - 8.1e-13 48.2 0.1 1.3e-09 37.6 0.1 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|121637055|ref|YP_977278.1| - 0.017 15.2 0.0 0.054 13.6 0.0 1.9 2 0 0 2 2 2 0 TAP-like protein Abhydrolase_6 PF12697.7 gi|121637056|ref|YP_977279.1| - 1.2e-16 62.0 18.9 1.5e-16 61.7 18.9 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121637056|ref|YP_977279.1| - 8.5e-16 58.4 0.3 2.4e-13 50.3 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121637056|ref|YP_977279.1| - 8.6e-08 31.7 0.2 7.4e-07 28.7 0.2 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DUF1298 PF06974.13 gi|121637057|ref|YP_977280.1| - 3.6e-09 36.7 0.0 6.1e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 gi|121637057|ref|YP_977280.1| - 0.0015 18.3 1.8 0.004 17.0 1.8 1.8 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain HTH_27 PF13463.6 gi|121637058|ref|YP_977281.1| - 0.00095 19.6 0.1 0.0021 18.5 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HemN_C PF06969.16 gi|121637058|ref|YP_977281.1| - 0.0012 18.9 0.0 0.002 18.1 0.0 1.4 1 0 0 1 1 1 1 HemN C-terminal domain MarR_2 PF12802.7 gi|121637058|ref|YP_977281.1| - 0.012 15.4 0.5 0.024 14.5 0.5 1.6 1 0 0 1 1 1 0 MarR family Polyketide_cyc PF03364.20 gi|121637058|ref|YP_977281.1| - 0.017 15.3 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport PPDK_N PF01326.19 gi|121637059|ref|YP_977282.1| - 5.5e-39 134.3 0.0 7.9e-29 101.0 0.0 3.1 1 1 1 2 2 2 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|121637059|ref|YP_977282.1| - 8.2e-22 76.7 2.4 2.3e-21 75.3 2.4 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain DUF222 PF02720.17 gi|121637060|ref|YP_977283.1| - 2.6e-108 362.1 10.0 3.1e-108 361.8 10.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637060|ref|YP_977283.1| - 0.12 12.6 0.2 0.27 11.4 0.2 1.6 1 0 0 1 1 1 0 HNH endonuclease DUF2083 PF09856.9 gi|121637061|ref|YP_977284.1| - 4e-65 218.4 0.0 6.5e-65 217.8 0.0 1.3 1 0 0 1 1 1 1 Predicted transcriptional regulator (DUF2083) Peptidase_M78 PF06114.13 gi|121637061|ref|YP_977284.1| - 2.1e-20 72.9 0.3 1.3e-19 70.4 0.0 2.3 3 0 0 3 3 3 1 IrrE N-terminal-like domain HTH_3 PF01381.22 gi|121637061|ref|YP_977284.1| - 8.3e-13 48.2 0.1 1.9e-12 47.0 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121637061|ref|YP_977284.1| - 2e-10 40.9 0.6 7.1e-10 39.1 0.6 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121637061|ref|YP_977284.1| - 1.4e-09 37.9 0.0 3.1e-09 36.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|121637061|ref|YP_977284.1| - 7.6e-05 22.5 1.1 0.00016 21.5 1.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|121637061|ref|YP_977284.1| - 0.0033 16.9 0.1 0.02 14.4 0.1 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|121637061|ref|YP_977284.1| - 0.0036 16.8 0.4 0.024 14.2 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|121637061|ref|YP_977284.1| - 0.01 16.3 0.1 0.026 15.0 0.1 1.7 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 gi|121637061|ref|YP_977284.1| - 0.033 14.1 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|121637061|ref|YP_977284.1| - 0.12 12.2 0.0 0.56 10.1 0.0 2.1 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MmgE_PrpD PF03972.14 gi|121637062|ref|YP_977285.1| - 1.5e-125 419.2 7.7 1.7e-125 419.0 7.7 1.0 1 0 0 1 1 1 1 MmgE/PrpD family Citrate_synt PF00285.21 gi|121637063|ref|YP_977286.1| - 2.3e-114 382.3 0.1 2.6e-114 382.1 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF3556 PF12077.8 gi|121637064|ref|YP_977287.1| - 1.1e-284 945.3 10.0 1.2e-284 945.1 10.0 1.0 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) TMEM239 PF15841.5 gi|121637064|ref|YP_977287.1| - 6.7 6.6 10.5 0.05 13.5 0.9 2.3 3 0 0 3 3 3 0 Transmembrane protein 239 family Meth_synt_2 PF01717.18 gi|121637065|ref|YP_977288.1| - 6.9e-158 525.1 0.3 2.8e-154 513.2 0.1 2.1 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|121637065|ref|YP_977288.1| - 8.4e-115 383.6 0.0 1.1e-109 366.8 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain VbhA PF18495.1 gi|121637065|ref|YP_977288.1| - 0.0087 15.9 3.4 0.038 13.9 0.5 3.3 3 0 0 3 3 3 1 Antitoxin VbhA SHOCT PF09851.9 gi|121637065|ref|YP_977288.1| - 0.028 14.2 1.2 0.051 13.3 0.1 2.1 2 0 0 2 2 2 0 Short C-terminal domain Pentapeptide_2 PF01469.18 gi|121637067|ref|YP_977290.1| - 1.3e-68 226.6 331.8 5e-11 42.3 28.4 12.3 5 3 6 13 13 13 13 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121637067|ref|YP_977290.1| - 1.9e-56 190.6 35.3 2.7e-56 190.0 35.3 1.2 1 0 0 1 1 1 1 PPE family Thiolase_C PF02803.18 gi|121637068|ref|YP_977291.1| - 2.7e-16 59.3 0.0 3e-16 59.2 0.0 1.1 1 0 0 1 1 1 1 Thiolase, C-terminal domain ECH_1 PF00378.20 gi|121637069|ref|YP_977292.1| - 3.3e-20 72.5 0.0 3.7e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121637069|ref|YP_977292.1| - 3.5e-13 49.8 0.0 3.5e-13 49.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase FAD_binding_3 PF01494.19 gi|121637071|ref|YP_977294.1| - 3.1e-15 56.3 7.4 4.5e-10 39.3 4.0 3.1 1 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|121637071|ref|YP_977294.1| - 3.1e-05 23.5 0.2 6.5e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121637071|ref|YP_977294.1| - 6e-05 22.3 0.9 6e-05 22.3 0.9 2.3 2 1 1 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121637071|ref|YP_977294.1| - 0.00016 21.0 0.4 0.00027 20.3 0.4 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|121637071|ref|YP_977294.1| - 0.00018 20.7 7.4 0.049 12.7 0.3 2.9 3 0 0 3 3 3 2 Lycopene cyclase protein DAO PF01266.24 gi|121637071|ref|YP_977294.1| - 0.00024 20.8 3.7 0.00083 19.0 0.2 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121637071|ref|YP_977294.1| - 0.0011 17.7 0.3 0.0017 17.1 0.3 1.2 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|121637071|ref|YP_977294.1| - 0.0022 18.2 0.1 0.0065 16.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|121637071|ref|YP_977294.1| - 0.0075 15.6 0.2 0.011 15.0 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121637071|ref|YP_977294.1| - 0.1 11.8 0.1 0.26 10.5 0.1 1.7 2 0 0 2 2 2 0 Thi4 family Pyr_redox PF00070.27 gi|121637071|ref|YP_977294.1| - 0.12 13.0 0.1 0.25 11.9 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ICMT PF04140.14 gi|121637072|ref|YP_977295.1| - 8.7e-27 93.4 1.1 8.7e-27 93.4 1.1 2.0 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 gi|121637072|ref|YP_977295.1| - 1.1e-08 35.4 0.7 1.1e-08 35.4 0.7 1.6 2 0 0 2 2 2 1 Phospholipid methyltransferase DUF1295 PF06966.12 gi|121637072|ref|YP_977295.1| - 0.0082 15.7 0.7 0.0082 15.7 0.7 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1295) CPBP PF02517.16 gi|121637073|ref|YP_977296.1| - 6.1e-09 36.1 5.0 6.1e-09 36.1 5.0 2.2 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease OST3_OST6 PF04756.13 gi|121637073|ref|YP_977296.1| - 0.084 12.2 0.1 0.18 11.1 0.0 1.5 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family ECH_1 PF00378.20 gi|121637074|ref|YP_977297.1| - 4.1e-44 150.8 0.0 4.6e-44 150.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121637074|ref|YP_977297.1| - 2.8e-23 83.0 0.1 4.2e-20 72.5 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase YdjM PF04307.14 gi|121637074|ref|YP_977297.1| - 0.24 10.7 3.0 0.2 11.0 0.2 2.0 1 1 1 2 2 2 0 LexA-binding, inner membrane-associated putative hydrolase PT-TG PF14449.6 gi|121637074|ref|YP_977297.1| - 0.96 9.4 3.3 36 4.3 0.0 3.9 4 0 0 4 4 4 0 Pre-toxin TG ECH_1 PF00378.20 gi|121637075|ref|YP_977298.1| - 3.5e-49 167.4 0.0 3.9e-49 167.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121637075|ref|YP_977298.1| - 2.3e-27 96.4 0.1 1.1e-25 90.8 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase CoA_transf_3 PF02515.17 gi|121637076|ref|YP_977299.1| - 2.4e-80 270.4 0.1 3.7e-80 269.8 0.1 1.2 1 1 0 1 1 1 1 CoA-transferase family III SnoaL_2 PF12680.7 gi|121637076|ref|YP_977299.1| - 0.0054 17.4 0.4 0.24 12.1 0.0 2.4 2 0 0 2 2 2 1 SnoaL-like domain adh_short PF00106.25 gi|121637077|ref|YP_977300.1| - 2.2e-41 141.5 0.6 2.6e-41 141.2 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637077|ref|YP_977300.1| - 7.8e-33 114.0 0.1 9.7e-33 113.7 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637077|ref|YP_977300.1| - 5.5e-07 29.7 6.3 7.1e-06 26.1 6.2 2.5 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121637077|ref|YP_977300.1| - 1.2e-05 24.9 0.4 1.7e-05 24.4 0.4 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121637077|ref|YP_977300.1| - 0.00067 18.7 0.5 0.0013 17.8 0.5 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|121637077|ref|YP_977300.1| - 0.039 13.9 1.7 0.055 13.4 1.7 1.3 1 0 0 1 1 1 0 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|121637077|ref|YP_977300.1| - 0.22 10.6 0.5 0.4 9.7 0.5 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain MMPL PF03176.15 gi|121637078|ref|YP_977301.1| - 9.7e-75 251.5 42.4 2.1e-50 171.5 12.1 2.8 2 1 0 2 2 2 2 MMPL family Methyltransf_23 PF13489.6 gi|121637079|ref|YP_977302.1| - 1.2e-15 57.8 0.0 1.4e-15 57.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637079|ref|YP_977302.1| - 9e-12 45.5 0.0 1.5e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637079|ref|YP_977302.1| - 2.4e-09 37.7 0.0 3.9e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637079|ref|YP_977302.1| - 1e-08 35.8 0.0 1.6e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637079|ref|YP_977302.1| - 7.9e-05 22.5 0.0 0.00014 21.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|121637079|ref|YP_977302.1| - 0.016 14.8 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|121637079|ref|YP_977302.1| - 0.048 13.0 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|121637079|ref|YP_977302.1| - 0.17 10.8 0.0 0.23 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) DUF938 PF06080.12 gi|121637079|ref|YP_977302.1| - 0.19 11.5 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) DUF222 PF02720.17 gi|121637080|ref|YP_977303.1| - 1.8e-99 333.0 14.2 2.5e-99 332.6 14.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637080|ref|YP_977303.1| - 9.7e-05 22.5 0.3 0.00023 21.2 0.3 1.6 1 0 0 1 1 1 1 HNH endonuclease TetR_C_24 PF17932.1 gi|121637080|ref|YP_977303.1| - 0.039 14.2 1.3 5.5 7.3 0.1 3.2 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain MarR_2 PF12802.7 gi|121637080|ref|YP_977303.1| - 0.16 11.9 2.2 0.52 10.3 0.0 2.9 3 0 0 3 3 3 0 MarR family DUF4096 PF13340.6 gi|121637081|ref|YP_977304.1| - 2.3e-27 95.0 1.8 3.1e-27 94.6 1.8 1.2 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) SIR2 PF02146.17 gi|121637082|ref|YP_977305.1| - 1.5e-54 184.6 0.0 1.8e-54 184.4 0.0 1.0 1 0 0 1 1 1 1 Sir2 family GntR PF00392.21 gi|121637083|ref|YP_977306.1| - 1.7e-14 53.2 0.1 2.7e-14 52.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 gi|121637083|ref|YP_977306.1| - 8.8e-05 22.1 0.0 0.00014 21.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|121637083|ref|YP_977306.1| - 0.00033 20.4 0.5 0.01 15.6 0.1 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_IclR PF09339.10 gi|121637083|ref|YP_977306.1| - 0.00033 20.4 0.9 0.78 9.6 0.1 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|121637083|ref|YP_977306.1| - 0.00043 20.1 1.8 0.0074 16.1 0.3 2.3 3 0 0 3 3 3 1 MarR family HTH_Crp_2 PF13545.6 gi|121637083|ref|YP_977306.1| - 0.00052 19.9 0.1 0.0012 18.8 0.0 1.6 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|121637083|ref|YP_977306.1| - 0.0019 18.1 0.0 0.015 15.2 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_CodY PF08222.11 gi|121637083|ref|YP_977306.1| - 0.0021 17.6 0.0 0.0052 16.3 0.0 1.6 2 0 0 2 2 2 1 CodY helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|121637083|ref|YP_977306.1| - 0.0024 17.2 0.0 0.094 12.1 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_24 PF13412.6 gi|121637083|ref|YP_977306.1| - 0.0029 17.1 0.0 0.017 14.7 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_10 PF04967.12 gi|121637083|ref|YP_977306.1| - 0.022 14.6 0.0 0.75 9.6 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain HTH_20 PF12840.7 gi|121637083|ref|YP_977306.1| - 0.025 14.7 0.1 0.081 13.0 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|121637083|ref|YP_977306.1| - 0.07 13.0 0.0 1.6 8.7 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|121637083|ref|YP_977306.1| - 0.11 12.3 0.1 0.96 9.3 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_50 PF18024.1 gi|121637083|ref|YP_977306.1| - 0.15 11.7 0.2 3.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain LCM PF04072.14 gi|121637084|ref|YP_977307.1| - 3.8e-13 49.8 0.2 6e-12 45.9 0.2 2.5 1 1 0 1 1 1 1 Leucine carboxyl methyltransferase DUF1697 PF08002.11 gi|121637085|ref|YP_977308.1| - 9.5e-34 116.8 0.0 1.4e-33 116.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1697) Putative_PNPOx PF01243.20 gi|121637086|ref|YP_977309.1| - 2.6e-16 59.6 0.0 3.4e-16 59.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HhH-GPD PF00730.25 gi|121637087|ref|YP_977310.1| - 1.1e-25 90.2 0.0 1.4e-25 89.9 0.0 1.1 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein GT87 PF09594.10 gi|121637090|ref|YP_977313.1| - 1.7e-52 178.5 32.2 1.7e-52 178.5 32.2 3.1 3 1 0 3 3 3 1 Glycosyltransferase family 87 Pterin_4a PF01329.19 gi|121637091|ref|YP_977314.1| - 7.1e-27 93.4 0.1 7.8e-27 93.3 0.1 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase IF-2 PF11987.8 gi|121637091|ref|YP_977314.1| - 0.079 13.1 0.1 0.15 12.2 0.1 1.4 1 1 0 1 1 1 0 Translation-initiation factor 2 NUDIX PF00293.28 gi|121637092|ref|YP_977315.1| - 2.8e-15 56.5 0.5 3.6e-15 56.2 0.5 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|121637092|ref|YP_977315.1| - 1.6e-05 24.9 0.2 3.6e-05 23.7 0.2 1.6 1 1 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 gi|121637092|ref|YP_977315.1| - 0.063 12.9 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotide hydrolase HTH_AsnC-type PF13404.6 gi|121637092|ref|YP_977315.1| - 0.077 12.8 1.0 4 7.3 0.0 2.7 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain Molybdopterin PF00384.22 gi|121637093|ref|YP_977316.1| - 5.2e-132 440.9 0.0 6.4e-132 440.6 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|121637093|ref|YP_977316.1| - 2.5e-21 75.8 0.1 7.1e-21 74.3 0.1 1.8 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|121637093|ref|YP_977316.1| - 0.025 14.5 0.1 0.057 13.4 0.1 1.7 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Fer4_11 PF13247.6 gi|121637094|ref|YP_977317.1| - 3.5e-36 123.3 6.3 3.5e-36 123.3 6.3 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Nitr_red_bet_C PF14711.6 gi|121637094|ref|YP_977317.1| - 5.1e-28 96.6 0.0 9.6e-28 95.7 0.0 1.5 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Fer4_10 PF13237.6 gi|121637094|ref|YP_977317.1| - 2.4e-08 34.0 15.6 7.1e-06 26.0 3.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121637094|ref|YP_977317.1| - 1.2e-06 29.0 20.4 0.0017 18.9 7.1 3.6 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121637094|ref|YP_977317.1| - 3.1e-06 27.0 18.7 0.0044 17.0 0.2 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_2 PF12797.7 gi|121637094|ref|YP_977317.1| - 0.0006 19.7 24.0 0.01 15.8 1.5 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|121637094|ref|YP_977317.1| - 0.0012 19.0 21.0 0.0049 17.0 5.0 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|121637094|ref|YP_977317.1| - 0.0098 16.3 24.6 0.034 14.7 1.1 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.27 gi|121637094|ref|YP_977317.1| - 0.013 15.3 18.3 0.036 13.9 2.2 4.5 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|121637094|ref|YP_977317.1| - 0.04 14.7 8.4 0.33 11.7 0.3 2.8 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|121637094|ref|YP_977317.1| - 0.063 13.8 6.0 0.42 11.2 0.2 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|121637094|ref|YP_977317.1| - 0.11 12.6 22.0 0.068 13.3 1.5 3.0 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|121637094|ref|YP_977317.1| - 0.26 11.8 0.1 0.26 11.8 0.1 3.7 2 1 0 2 2 1 0 4Fe-4S dicluster domain Nitrate_red_del PF02613.15 gi|121637095|ref|YP_977318.1| - 1.6e-07 31.4 0.1 2.4e-07 30.8 0.1 1.3 1 1 0 1 1 1 1 Nitrate reductase delta subunit Nitrate_red_gam PF02665.14 gi|121637096|ref|YP_977319.1| - 8.4e-84 280.5 13.1 9.5e-84 280.3 13.1 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit COX7a PF02238.15 gi|121637096|ref|YP_977319.1| - 0.35 11.3 3.4 0.4 11.1 0.1 2.8 3 1 0 3 3 3 0 Cytochrome c oxidase subunit VII GTP_EFTU PF00009.27 gi|121637097|ref|YP_977320.1| - 7.9e-50 169.1 0.0 1.2e-49 168.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|121637097|ref|YP_977320.1| - 3.2e-21 75.1 0.0 7e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|121637097|ref|YP_977320.1| - 1.5e-12 47.8 0.5 3.8e-12 46.4 0.5 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|121637097|ref|YP_977320.1| - 2.3e-06 27.6 0.0 5.2e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 gi|121637097|ref|YP_977320.1| - 0.019 14.3 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 Septin SBP_bac_5 PF00496.22 gi|121637098|ref|YP_977321.1| - 3e-32 112.0 0.1 5.3e-32 111.2 0.1 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TetR_C_11 PF16859.5 gi|121637099|ref|YP_977322.1| - 2e-14 53.9 0.2 2e-14 53.9 0.2 2.0 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637099|ref|YP_977322.1| - 5.6e-12 45.3 1.1 9.7e-12 44.5 1.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_7 PF14246.6 gi|121637099|ref|YP_977322.1| - 0.035 14.1 0.0 0.095 12.7 0.0 1.8 1 1 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain TetR_C_36 PF18598.1 gi|121637099|ref|YP_977322.1| - 0.077 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Sigma70_ECF PF07638.11 gi|121637099|ref|YP_977322.1| - 0.093 12.6 0.1 0.15 11.9 0.1 1.3 1 0 0 1 1 1 0 ECF sigma factor PPE PF00823.19 gi|121637100|ref|YP_977323.1| - 6.3e-46 156.3 10.2 7.3e-46 156.1 10.2 1.0 1 0 0 1 1 1 1 PPE family VIT1 PF01988.19 gi|121637100|ref|YP_977323.1| - 0.008 16.1 0.2 0.012 15.5 0.2 1.3 1 0 0 1 1 1 1 VIT family GxGYxYP_N PF16216.5 gi|121637100|ref|YP_977323.1| - 0.092 12.9 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 GxGYxY sequence motif in domain of unknown function N-terminal PE PF00934.20 gi|121637101|ref|YP_977324.1| - 3.2e-23 81.9 0.0 3.6e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 PE family Sec7_N PF12783.7 gi|121637101|ref|YP_977324.1| - 0.086 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal SeqA_N PF17206.3 gi|121637101|ref|YP_977324.1| - 0.18 11.1 0.0 6.5 6.2 0.0 2.2 2 0 0 2 2 2 0 SeqA protein N-terminal domain PIG-L PF02585.17 gi|121637102|ref|YP_977325.1| - 6.9e-28 97.9 0.7 1.1e-27 97.3 0.3 1.5 2 0 0 2 2 2 1 GlcNAc-PI de-N-acetylase Glyco_transf_4 PF13439.6 gi|121637102|ref|YP_977325.1| - 0.012 15.6 0.8 0.07 13.1 0.1 2.2 2 0 0 2 2 2 0 Glycosyltransferase Family 4 HemolysinCabind PF00353.19 gi|121637103|ref|YP_977326.1| - 0.1 12.6 1.4 0.2 11.7 1.4 1.4 1 0 0 1 1 1 0 RTX calcium-binding nonapeptide repeat (4 copies) PE PF00934.20 gi|121637104|ref|YP_977327.1| - 3.3e-33 113.9 20.6 3.3e-33 113.9 20.6 2.7 2 0 0 2 2 2 1 PE family FeS_assembly_P PF01883.19 gi|121637104|ref|YP_977327.1| - 0.28 11.4 2.3 0.45 10.7 0.0 2.5 3 0 0 3 3 3 0 Iron-sulfur cluster assembly protein MHB PF16525.5 gi|121637104|ref|YP_977327.1| - 1.1 9.6 3.9 1.2 9.5 2.1 2.0 2 0 0 2 2 2 0 Haemophore, haem-binding TetR_C_15 PF17918.1 gi|121637104|ref|YP_977327.1| - 1.3 9.8 10.2 17 6.2 5.9 2.9 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Radical_SAM PF04055.21 gi|121637105|ref|YP_977328.1| - 3.8e-27 95.7 0.0 2.1e-12 47.8 0.0 2.7 2 0 0 2 2 2 2 Radical SAM superfamily Oxidored_FMN PF00724.20 gi|121637107|ref|YP_977330.1| - 2.6e-77 260.4 0.0 3.4e-77 260.0 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.14 gi|121637107|ref|YP_977330.1| - 1.3e-23 83.7 0.2 2.1e-23 83.0 0.2 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121637107|ref|YP_977330.1| - 1.5e-10 41.1 0.2 7.2e-10 39.0 0.1 2.3 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|121637107|ref|YP_977330.1| - 5.2e-08 33.3 3.7 7.1e-06 26.5 0.2 4.0 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121637107|ref|YP_977330.1| - 5.9e-08 32.5 0.3 9.4e-08 31.8 0.3 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121637107|ref|YP_977330.1| - 1.5e-07 30.5 0.1 2.8e-07 29.6 0.1 1.4 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 gi|121637107|ref|YP_977330.1| - 1.9e-06 27.7 0.2 1.9e-06 27.7 0.2 3.6 3 1 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121637107|ref|YP_977330.1| - 3.8e-06 26.2 0.5 8.4e-06 25.1 0.5 1.6 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|121637107|ref|YP_977330.1| - 1.4e-05 24.5 1.3 0.06 12.6 0.1 2.3 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121637107|ref|YP_977330.1| - 0.00014 21.1 0.1 0.00025 20.3 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|121637107|ref|YP_977330.1| - 0.0003 20.7 0.6 0.018 14.9 0.2 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 gi|121637107|ref|YP_977330.1| - 0.00043 19.7 0.0 0.00081 18.8 0.0 1.4 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|121637107|ref|YP_977330.1| - 0.0086 16.1 3.0 0.032 14.2 0.1 3.0 4 0 0 4 4 3 1 FAD-NAD(P)-binding Thi4 PF01946.17 gi|121637107|ref|YP_977330.1| - 0.009 15.3 0.5 0.021 14.1 0.0 1.8 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 gi|121637107|ref|YP_977330.1| - 0.012 14.7 0.1 0.52 9.4 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 gi|121637107|ref|YP_977330.1| - 0.012 14.8 2.7 0.02 14.2 0.1 2.3 3 0 0 3 3 3 0 FAD binding domain AlaDh_PNT_C PF01262.21 gi|121637107|ref|YP_977330.1| - 0.014 14.7 1.8 0.02 14.2 0.0 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|121637107|ref|YP_977330.1| - 0.016 14.3 0.5 0.039 13.0 0.2 1.8 2 0 0 2 2 2 0 Lycopene cyclase protein PALP PF00291.25 gi|121637107|ref|YP_977330.1| - 0.017 14.5 0.3 1.7 8.0 0.1 2.5 2 0 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme 2-Hacid_dh_C PF02826.19 gi|121637107|ref|YP_977330.1| - 0.047 13.1 0.3 5.5 6.3 0.1 2.5 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|121637107|ref|YP_977330.1| - 0.15 12.0 0.2 0.58 10.1 0.0 2.1 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|121637107|ref|YP_977330.1| - 0.28 10.8 1.1 0.45 10.1 0.0 1.9 3 0 0 3 3 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Dus PF01207.17 gi|121637107|ref|YP_977330.1| - 0.32 10.0 1.8 0.75 8.8 0.1 2.4 2 1 1 3 3 3 0 Dihydrouridine synthase (Dus) NAD_binding_7 PF13241.6 gi|121637107|ref|YP_977330.1| - 0.32 11.4 1.6 1.8 9.0 0.1 2.4 2 0 0 2 2 2 0 Putative NAD(P)-binding Vir_act_alpha_C PF10400.9 gi|121637108|ref|YP_977331.1| - 3.5e-18 66.1 0.3 9.4e-18 64.7 0.1 1.8 3 0 0 3 3 3 1 Virulence activator alpha C-term PadR PF03551.14 gi|121637108|ref|YP_977331.1| - 7.5e-13 48.2 0.0 1.8e-12 47.0 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family Fer4 PF00037.27 gi|121637109|ref|YP_977332.1| - 2.3e-11 43.0 14.4 1.4e-08 34.2 5.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|121637109|ref|YP_977332.1| - 3e-06 28.1 4.3 0.00029 21.7 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|121637109|ref|YP_977332.1| - 7.1e-06 26.1 4.7 0.00013 22.0 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121637109|ref|YP_977332.1| - 1.7e-05 25.3 12.8 0.00037 21.0 13.3 2.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121637109|ref|YP_977332.1| - 0.00015 21.7 4.9 0.00015 21.7 4.9 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|121637109|ref|YP_977332.1| - 0.00029 21.1 2.1 0.00029 21.1 2.1 2.5 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|121637109|ref|YP_977332.1| - 0.00033 20.8 10.2 0.00081 19.5 10.3 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|121637109|ref|YP_977332.1| - 0.0005 20.5 4.5 0.0021 18.5 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|121637109|ref|YP_977332.1| - 0.00079 19.9 9.7 0.012 16.1 1.2 2.2 1 1 3 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|121637109|ref|YP_977332.1| - 0.0012 18.8 3.7 0.0012 18.8 3.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|121637109|ref|YP_977332.1| - 0.0016 18.5 14.9 0.0082 16.3 15.0 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|121637109|ref|YP_977332.1| - 0.015 15.8 7.8 0.067 13.7 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|121637109|ref|YP_977332.1| - 0.13 13.3 15.4 0.25 12.4 7.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Aminotran_1_2 PF00155.21 gi|121637110|ref|YP_977333.1| - 2.6e-41 142.0 0.0 4.5e-41 141.2 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|121637110|ref|YP_977333.1| - 0.12 10.9 0.0 0.17 10.3 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme ResIII PF04851.15 gi|121637111|ref|YP_977334.1| - 4.4e-17 62.6 0.0 6.5e-17 62.1 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|121637111|ref|YP_977334.1| - 0.013 15.8 0.0 0.026 14.9 0.0 1.5 1 0 0 1 1 1 0 Helicase conserved C-terminal domain ThrE PF06738.12 gi|121637111|ref|YP_977334.1| - 0.62 9.4 7.2 1.2 8.4 7.2 1.4 1 0 0 1 1 1 0 Putative threonine/serine exporter Acyl_transf_1 PF00698.21 gi|121637112|ref|YP_977335.1| - 1.9e-93 313.4 1.1 3.6e-93 312.6 1.1 1.5 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121637112|ref|YP_977335.1| - 1.2e-87 293.7 2.9 1.9e-87 293.0 0.1 2.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121637112|ref|YP_977335.1| - 1.1e-59 201.3 0.9 1.1e-59 201.3 0.9 3.2 4 0 0 4 4 4 1 KR domain PS-DH PF14765.6 gi|121637112|ref|YP_977335.1| - 6.8e-50 170.0 6.7 1.3e-49 169.0 6.7 1.5 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121637112|ref|YP_977335.1| - 9.3e-38 128.9 1.5 9.3e-38 128.9 1.5 2.4 3 0 0 3 3 2 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N PF00107.26 gi|121637112|ref|YP_977335.1| - 1.6e-21 76.6 0.0 7.5e-21 74.5 0.0 2.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637112|ref|YP_977335.1| - 1.8e-17 64.6 0.5 1.1e-16 62.1 0.1 2.8 2 0 0 2 2 1 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121637112|ref|YP_977335.1| - 2.1e-11 44.3 0.2 1.4e-10 41.6 0.0 2.5 3 0 0 3 3 3 1 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121637112|ref|YP_977335.1| - 1.2e-09 38.4 0.0 4.1e-09 36.6 0.0 2.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site adh_short PF00106.25 gi|121637112|ref|YP_977335.1| - 6.7e-09 35.5 1.3 1.4e-08 34.5 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase ADH_N PF08240.12 gi|121637112|ref|YP_977335.1| - 1.9e-06 27.7 0.0 8.2e-06 25.7 0.0 2.2 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Thiolase_N PF00108.23 gi|121637112|ref|YP_977335.1| - 3.2e-06 26.7 3.2 4.5e-06 26.2 0.1 2.9 4 0 0 4 4 4 1 Thiolase, N-terminal domain NMT1_3 PF16868.5 gi|121637112|ref|YP_977335.1| - 0.0093 15.4 0.0 0.27 10.6 0.0 2.3 2 0 0 2 2 2 1 NMT1-like family LEM PF03020.15 gi|121637112|ref|YP_977335.1| - 0.12 12.0 0.0 21 4.8 0.0 2.6 2 0 0 2 2 2 0 LEM domain Condensation PF00668.20 gi|121637113|ref|YP_977336.1| - 1.3e-18 67.0 0.0 1.6e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 Condensation domain MMPL PF03176.15 gi|121637114|ref|YP_977337.1| - 8.9e-194 642.8 37.6 1.4e-105 352.9 17.6 2.3 2 0 0 2 2 2 2 MMPL family HEPN_SAV2148 PF18725.1 gi|121637114|ref|YP_977337.1| - 0.039 13.4 0.9 0.095 12.1 0.2 2.0 2 0 0 2 2 2 0 SAV2148-like HEPN PhageMin_Tail PF10145.9 gi|121637114|ref|YP_977337.1| - 0.045 13.6 8.5 0.022 14.6 2.4 2.7 2 0 0 2 2 2 0 Phage-related minor tail protein T2SSF PF00482.23 gi|121637114|ref|YP_977337.1| - 0.48 10.4 0.0 0.48 10.4 0.0 4.0 5 0 0 5 5 5 0 Type II secretion system (T2SS), protein F Sterol-sensing PF12349.8 gi|121637114|ref|YP_977337.1| - 5.9 6.7 14.1 0.11 12.3 2.3 2.5 2 0 0 2 2 2 0 Sterol-sensing domain of SREBP cleavage-activation PE-PPE PF08237.11 gi|121637115|ref|YP_977338.1| - 1.5e-74 250.4 2.6 2.2e-74 249.8 2.6 1.2 1 0 0 1 1 1 1 PE-PPE domain AMP-binding PF00501.28 gi|121637116|ref|YP_977339.1| - 9.6e-72 241.9 0.0 1.1e-71 241.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|121637116|ref|YP_977339.1| - 0.0056 17.0 0.0 0.027 14.8 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain HTH_30 PF13556.6 gi|121637117|ref|YP_977340.1| - 2.4e-21 75.3 0.2 8.3e-21 73.6 0.2 2.0 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_1 PF00126.27 gi|121637117|ref|YP_977340.1| - 0.0016 18.3 0.0 0.016 15.1 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_8 PF02954.19 gi|121637117|ref|YP_977340.1| - 0.0039 16.9 0.1 0.015 15.0 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family DUF3479 PF11965.8 gi|121637117|ref|YP_977340.1| - 0.12 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) Aldedh PF00171.22 gi|121637118|ref|YP_977341.1| - 8.3e-93 311.4 0.0 9.6e-93 311.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Pro_dh PF01619.18 gi|121637119|ref|YP_977342.1| - 1e-27 97.4 0.0 1.4e-27 97.1 0.0 1.1 1 0 0 1 1 1 1 Proline dehydrogenase Sigma70_r4_2 PF08281.12 gi|121637120|ref|YP_977343.1| - 1.8e-11 43.5 0.1 5e-11 42.1 0.2 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 gi|121637120|ref|YP_977343.1| - 1.4e-08 34.4 0.2 2.9e-08 33.3 0.2 1.6 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121637120|ref|YP_977343.1| - 0.00042 19.8 0.1 0.0009 18.7 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Abhydrolase_1 PF00561.20 gi|121637120|ref|YP_977343.1| - 0.0023 17.6 0.0 0.0031 17.2 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121637120|ref|YP_977343.1| - 0.013 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Palm_thioest PF02089.15 gi|121637121|ref|YP_977344.1| - 2e-05 24.5 0.0 2.1e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_1 PF00561.20 gi|121637121|ref|YP_977344.1| - 5.4e-05 23.0 0.0 0.00012 21.8 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 gi|121637121|ref|YP_977344.1| - 0.00036 20.3 0.0 0.00086 19.1 0.0 1.6 2 0 0 2 2 2 1 PGAP1-like protein Hydrolase_4 PF12146.8 gi|121637121|ref|YP_977344.1| - 0.0012 18.2 0.0 0.0017 17.7 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121637121|ref|YP_977344.1| - 0.0083 16.8 10.0 0.016 15.8 10.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 gi|121637121|ref|YP_977344.1| - 0.086 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase Thioesterase PF00975.20 gi|121637121|ref|YP_977344.1| - 0.091 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Esterase PF00756.20 gi|121637121|ref|YP_977344.1| - 0.18 11.4 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Putative esterase AMP-binding PF00501.28 gi|121637122|ref|YP_977345.1| - 2.5e-65 220.8 0.9 2.2e-64 217.6 0.9 1.9 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121637122|ref|YP_977345.1| - 3.7e-20 72.7 0.3 3.7e-20 72.7 0.3 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GGDEF_2 PF17853.1 gi|121637123|ref|YP_977346.1| - 1.3e-11 44.8 1.7 3.3e-11 43.5 0.8 2.2 1 1 1 2 2 2 1 GGDEF-like domain HTH_30 PF13556.6 gi|121637123|ref|YP_977346.1| - 8.4e-11 41.5 2.7 8.4e-11 41.5 2.7 2.5 4 0 0 4 4 4 1 PucR C-terminal helix-turn-helix domain HTH_1 PF00126.27 gi|121637123|ref|YP_977346.1| - 0.029 14.3 0.3 0.08 12.9 0.3 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family PE PF00934.20 gi|121637124|ref|YP_977347.1| - 1.6e-31 108.5 23.3 2e-31 108.2 23.3 1.1 1 0 0 1 1 1 1 PE family PPE PF00823.19 gi|121637125|ref|YP_977348.1| - 5.2e-59 198.9 29.4 7.2e-59 198.4 23.2 2.5 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121637125|ref|YP_977348.1| - 1.3e-17 64.5 15.4 1.3e-17 64.5 15.4 5.0 3 1 1 4 4 4 1 Polymorphic PE/PPE proteins C terminal DegV PF02645.16 gi|121637125|ref|YP_977348.1| - 0.16 11.2 0.0 0.32 10.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 WXG100 PF06013.12 gi|121637126|ref|YP_977349.1| - 1.5e-19 70.0 3.4 1.7e-19 69.8 3.4 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG WXG100 PF06013.12 gi|121637127|ref|YP_977350.1| - 7.2e-13 48.6 1.5 8.2e-13 48.4 1.5 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Transposase_mut PF00872.18 gi|121637128|ref|YP_977351.1| - 1.4e-154 514.6 0.0 1.6e-154 514.4 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121637128|ref|YP_977351.1| - 2e-05 24.9 0.0 5.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain Sugar_tr PF00083.24 gi|121637129|ref|YP_977352.1| - 3.5e-34 118.5 25.2 5.7e-31 107.9 25.2 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|121637129|ref|YP_977352.1| - 1.6e-24 86.5 43.0 1.6e-24 86.5 43.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF21 PF01595.20 gi|121637129|ref|YP_977352.1| - 3.9 7.1 11.3 11 5.7 3.8 2.8 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain THDPS_M PF14789.6 gi|121637130|ref|YP_977353.1| - 1.3e-20 73.1 0.1 2.8e-20 72.1 0.1 1.6 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase middle Hexapep_2 PF14602.6 gi|121637130|ref|YP_977353.1| - 2.6e-16 59.1 11.4 1.2e-15 56.9 2.3 2.8 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 gi|121637130|ref|YP_977353.1| - 0.00013 21.6 6.3 0.0095 15.6 0.1 3.2 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Peptidase_M20 PF01546.28 gi|121637131|ref|YP_977354.1| - 1.7e-20 73.6 0.2 2.4e-20 73.1 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|121637131|ref|YP_977354.1| - 4e-11 42.8 0.0 1.6e-10 40.9 0.0 2.0 1 1 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|121637131|ref|YP_977354.1| - 8.5e-09 35.4 0.0 4.9e-07 29.6 0.0 2.1 2 0 0 2 2 2 1 Peptidase family M28 Cyclase PF04199.13 gi|121637131|ref|YP_977354.1| - 0.02 15.1 0.0 0.31 11.3 0.0 2.4 2 1 0 2 2 2 0 Putative cyclase TPR_16 PF13432.6 gi|121637132|ref|YP_977355.1| - 3 8.6 26.9 0.092 13.4 11.6 3.7 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|121637132|ref|YP_977355.1| - 5.6 8.1 26.1 5.3 8.1 0.3 4.4 3 1 1 4 4 4 0 Tetratricopeptide repeat AAA_16 PF13191.6 gi|121637133|ref|YP_977356.1| - 4.5e-06 27.2 1.9 0.0026 18.2 0.0 4.0 3 2 2 5 5 5 2 AAA ATPase domain AAA_22 PF13401.6 gi|121637133|ref|YP_977356.1| - 4.1e-05 23.9 0.0 0.00014 22.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121637133|ref|YP_977356.1| - 0.0022 17.9 0.0 0.0047 16.9 0.0 1.5 1 0 0 1 1 1 1 NACHT domain AAA_5 PF07728.14 gi|121637133|ref|YP_977356.1| - 0.008 16.2 0.1 0.062 13.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|121637133|ref|YP_977356.1| - 0.0087 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|121637133|ref|YP_977356.1| - 0.0091 15.7 0.1 0.026 14.2 0.1 1.8 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|121637133|ref|YP_977356.1| - 0.049 12.8 0.0 0.16 11.1 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain DUF2014 PF09427.10 gi|121637133|ref|YP_977356.1| - 0.12 11.7 6.2 1.2 8.5 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2014) Tnp_DNA_bind PF14706.6 gi|121637133|ref|YP_977356.1| - 0.39 10.6 2.7 0.78 9.6 0.2 3.0 3 0 0 3 3 3 0 Transposase DNA-binding Lysine_decarbox PF03641.14 gi|121637134|ref|YP_977357.1| - 3.6e-39 133.9 0.0 4.4e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 gi|121637134|ref|YP_977357.1| - 8.1e-20 71.0 0.0 9.9e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 SLOG cluster4 family AMP-binding PF00501.28 gi|121637135|ref|YP_977358.1| - 3.4e-67 226.9 0.0 4.1e-67 226.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121637135|ref|YP_977358.1| - 4.2e-09 37.3 0.0 9.1e-09 36.2 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Pterin_bind PF00809.22 gi|121637136|ref|YP_977359.1| - 1.3e-72 244.5 0.1 1.6e-72 244.1 0.1 1.1 1 0 0 1 1 1 1 Pterin binding enzyme PspC PF04024.12 gi|121637136|ref|YP_977359.1| - 0.12 12.2 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 PspC domain Glycos_transf_2 PF00535.26 gi|121637137|ref|YP_977360.1| - 1.1e-10 41.6 0.0 2.2e-10 40.6 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121637137|ref|YP_977360.1| - 2.1e-07 31.1 0.0 3.1e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Osmo_MPGsynth PF09488.10 gi|121637137|ref|YP_977360.1| - 0.00075 18.3 0.0 0.3 9.7 0.0 2.9 2 1 1 3 3 3 2 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) Glyco_tranf_2_2 PF10111.9 gi|121637137|ref|YP_977360.1| - 0.035 13.6 0.0 0.047 13.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DivIVA PF05103.13 gi|121637138|ref|YP_977361.1| - 0.00021 21.3 0.0 0.00026 21.1 0.0 1.1 1 0 0 1 1 1 1 DivIVA protein Adenine_glyco PF03352.13 gi|121637139|ref|YP_977362.1| - 3.6e-66 222.3 0.0 4.6e-66 221.9 0.0 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase DUF3117 PF11314.8 gi|121637140|ref|YP_977363.1| - 2.8e-28 97.5 4.2 3.5e-28 97.1 4.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3117) Glycos_transf_1 PF00534.20 gi|121637141|ref|YP_977364.1| - 2.2e-28 98.9 0.0 3.4e-28 98.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121637141|ref|YP_977364.1| - 6.3e-28 97.9 1.5 6.3e-28 97.9 1.5 2.0 2 1 1 3 3 3 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|121637141|ref|YP_977364.1| - 4.6e-23 82.1 1.0 8.8e-23 81.2 1.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|121637141|ref|YP_977364.1| - 3.9e-15 56.6 8.5 3.9e-15 56.6 8.5 3.0 2 2 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|121637141|ref|YP_977364.1| - 1.7e-11 44.3 0.0 6.3e-11 42.5 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|121637141|ref|YP_977364.1| - 7.8e-07 29.0 3.3 4.1e-05 23.4 0.9 2.3 1 1 1 2 2 2 2 Starch synthase catalytic domain NTP_transferase PF00483.23 gi|121637142|ref|YP_977365.1| - 4.2e-72 242.7 0.0 5.7e-72 242.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|121637142|ref|YP_977365.1| - 9.9e-07 29.3 0.0 1.5e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|121637142|ref|YP_977365.1| - 0.00066 18.7 0.0 0.0013 17.8 0.0 1.4 1 0 0 1 1 1 1 L-fucokinase Hexapep PF00132.24 gi|121637142|ref|YP_977365.1| - 0.0054 16.4 8.7 1.1 9.0 3.0 3.4 1 1 2 3 3 3 3 Bacterial transferase hexapeptide (six repeats) PE PF00934.20 gi|121637143|ref|YP_977366.1| - 6.2e-30 103.4 22.6 1e-29 102.7 22.6 1.3 1 0 0 1 1 1 1 PE family MtrE PF04206.12 gi|121637143|ref|YP_977366.1| - 0.99 8.7 8.0 1.2 8.4 8.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E Peptidase_S15 PF02129.18 gi|121637144|ref|YP_977367.1| - 3.1e-41 141.7 0.0 8.7e-39 133.7 0.0 2.1 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) PepX_C PF08530.10 gi|121637144|ref|YP_977367.1| - 7.1e-22 78.5 0.1 3.4e-21 76.2 0.0 2.1 2 1 0 2 2 2 1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Peptidase_S9 PF00326.21 gi|121637144|ref|YP_977367.1| - 2.4e-05 23.9 0.0 3.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121637144|ref|YP_977367.1| - 0.0067 15.7 0.0 0.17 11.1 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 PEMT PF04191.13 gi|121637145|ref|YP_977368.1| - 6.9e-12 45.7 1.1 6.9e-12 45.7 1.1 1.9 2 0 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 gi|121637145|ref|YP_977368.1| - 1e-08 35.5 0.1 2.5e-08 34.2 0.1 1.7 1 1 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF1295 PF06966.12 gi|121637145|ref|YP_977368.1| - 1.4e-05 24.7 0.5 1.9e-05 24.3 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) ERG4_ERG24 PF01222.17 gi|121637145|ref|YP_977368.1| - 1.5e-05 23.9 0.0 2.2e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family NnrU PF07298.11 gi|121637145|ref|YP_977368.1| - 0.0053 16.3 0.7 0.0053 16.3 0.7 1.8 1 1 1 2 2 2 1 NnrU protein DUF3899 PF13038.6 gi|121637145|ref|YP_977368.1| - 1 9.9 6.9 24 5.5 5.4 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) ABC2_membrane_3 PF12698.7 gi|121637146|ref|YP_977369.1| - 1.5 7.8 15.9 0.21 10.7 3.4 2.4 2 0 0 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|121637147|ref|YP_977370.1| - 5.5e-26 91.7 0.0 9.8e-26 90.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121637147|ref|YP_977370.1| - 5e-12 46.2 0.5 2.9e-06 27.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|121637147|ref|YP_977370.1| - 1.1e-06 29.2 0.0 2e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|121637147|ref|YP_977370.1| - 0.004 16.9 0.1 0.015 15.0 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637147|ref|YP_977370.1| - 0.027 14.9 0.0 0.051 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|121637147|ref|YP_977370.1| - 0.028 14.0 0.0 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|121637147|ref|YP_977370.1| - 0.037 14.5 0.0 0.067 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|121637147|ref|YP_977370.1| - 0.048 13.4 0.0 0.13 12.0 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain TetR_C_25 PF17933.1 gi|121637148|ref|YP_977371.1| - 1.9e-46 156.8 0.3 3.2e-46 156.0 0.3 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637148|ref|YP_977371.1| - 2.8e-14 52.6 0.6 6e-14 51.6 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family T2SSF PF00482.23 gi|121637148|ref|YP_977371.1| - 0.044 13.7 0.2 0.21 11.5 0.1 2.0 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F TetR_C_11 PF16859.5 gi|121637148|ref|YP_977371.1| - 0.061 13.6 5.1 0.39 11.0 0.0 3.1 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Methyltransf_3 PF01596.17 gi|121637149|ref|YP_977372.1| - 2.2e-25 89.1 0.0 2.5e-25 88.9 0.0 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|121637149|ref|YP_977372.1| - 3.9e-14 53.6 0.1 6.3e-14 52.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637149|ref|YP_977372.1| - 6.2e-09 35.8 0.0 8e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637149|ref|YP_977372.1| - 1.7e-08 35.0 0.0 3.1e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637149|ref|YP_977372.1| - 2.2e-07 31.4 0.0 5.2e-07 30.2 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121637149|ref|YP_977372.1| - 0.00059 19.4 0.0 0.00099 18.7 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|121637149|ref|YP_977372.1| - 0.026 14.3 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|121637149|ref|YP_977372.1| - 0.029 13.7 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family GidB PF02527.15 gi|121637149|ref|YP_977372.1| - 0.03 13.7 0.2 1.1 8.6 0.0 2.1 1 1 1 2 2 2 0 rRNA small subunit methyltransferase G GCD14 PF08704.10 gi|121637149|ref|YP_977372.1| - 0.17 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Sigma70_r2 PF04542.14 gi|121637150|ref|YP_977373.1| - 3e-22 78.2 0.9 5.1e-22 77.4 0.9 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121637150|ref|YP_977373.1| - 1.8e-17 62.7 0.1 4.9e-17 61.3 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|121637150|ref|YP_977373.1| - 3.9e-14 51.9 0.0 7.9e-14 50.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121637150|ref|YP_977373.1| - 0.00084 19.3 0.0 0.0015 18.5 0.0 1.4 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 gi|121637150|ref|YP_977373.1| - 0.0028 17.4 0.1 0.0081 15.9 0.1 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_AsnC-type PF13404.6 gi|121637150|ref|YP_977373.1| - 0.051 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain UBM PF14377.6 gi|121637150|ref|YP_977373.1| - 1.1 8.9 3.8 0.64 9.6 0.2 2.5 3 0 0 3 3 3 0 Ubiquitin binding region zf-HC2 PF13490.6 gi|121637151|ref|YP_977374.1| - 0.022 15.0 1.2 0.05 13.9 1.2 1.6 1 0 0 1 1 1 0 Putative zinc-finger Trypsin_2 PF13365.6 gi|121637152|ref|YP_977375.1| - 1.6e-35 123.2 3.5 3.7e-35 122.0 3.5 1.7 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|121637152|ref|YP_977375.1| - 1.9e-15 57.3 0.5 1.9e-15 57.3 0.5 1.6 2 0 0 2 2 2 1 Trypsin PDZ_2 PF13180.6 gi|121637152|ref|YP_977375.1| - 3.7e-13 49.6 1.1 3.7e-13 49.6 1.1 2.8 3 0 0 3 3 3 1 PDZ domain PDZ_6 PF17820.1 gi|121637152|ref|YP_977375.1| - 3.3e-07 30.0 3.8 3.1e-06 26.9 1.4 3.2 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.24 gi|121637152|ref|YP_977375.1| - 6.6e-07 29.6 1.6 3.2e-06 27.4 0.9 2.5 2 0 0 2 2 2 1 PDZ domain GRASP55_65 PF04495.14 gi|121637152|ref|YP_977375.1| - 0.013 15.9 0.1 0.056 13.8 0.0 1.9 2 0 0 2 2 2 0 GRASP55/65 PDZ-like domain Peptidase_S46 PF10459.9 gi|121637152|ref|YP_977375.1| - 0.029 13.0 1.4 0.75 8.4 0.4 2.1 2 0 0 2 2 2 0 Peptidase S46 CLP1_P PF16575.5 gi|121637152|ref|YP_977375.1| - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop PIG-H PF10181.9 gi|121637152|ref|YP_977375.1| - 0.12 12.2 0.0 0.41 10.5 0.0 1.8 2 0 0 2 2 2 0 GPI-GlcNAc transferase complex, PIG-H component DUF31 PF01732.16 gi|121637152|ref|YP_977375.1| - 0.3 10.6 0.4 8.3 5.8 0.0 2.1 2 0 0 2 2 2 0 Putative peptidase (DUF31) DUF4330 PF14221.6 gi|121637152|ref|YP_977375.1| - 1.2 9.3 11.6 23 5.2 0.1 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4330) MttA_Hcf106 PF02416.16 gi|121637153|ref|YP_977376.1| - 0.00012 21.4 0.8 0.00012 21.3 0.0 1.5 2 0 0 2 2 2 1 mttA/Hcf106 family Hydrolase_6 PF13344.6 gi|121637154|ref|YP_977377.1| - 5.3e-22 77.8 0.0 1e-21 76.9 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121637154|ref|YP_977377.1| - 5.9e-19 67.9 0.1 2.1e-18 66.1 0.2 2.0 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|121637154|ref|YP_977377.1| - 8.4e-12 45.8 6.5 5.7e-06 26.8 0.3 3.0 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|121637154|ref|YP_977377.1| - 1.9e-10 41.1 1.7 7.5e-07 29.4 0.0 3.0 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 gi|121637154|ref|YP_977377.1| - 0.021 14.4 0.1 0.039 13.6 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase bPH_2 PF03703.14 gi|121637155|ref|YP_977378.1| - 8.7e-26 89.9 2.4 1.6e-14 53.8 0.3 3.3 3 0 0 3 3 3 3 Bacterial PH domain FA_desaturase PF00487.24 gi|121637155|ref|YP_977378.1| - 5.9 6.6 15.8 2.7 7.8 1.7 2.8 3 0 0 3 3 3 0 Fatty acid desaturase bPH_2 PF03703.14 gi|121637156|ref|YP_977379.1| - 3.6e-16 59.1 0.3 5.1e-16 58.6 0.3 1.2 1 0 0 1 1 1 1 Bacterial PH domain ParA PF10609.9 gi|121637158|ref|YP_977381.1| - 5.9e-86 287.9 0.2 7.5e-86 287.6 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase FeS_assembly_P PF01883.19 gi|121637158|ref|YP_977381.1| - 6.8e-18 64.6 0.2 2e-17 63.1 0.2 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein CbiA PF01656.23 gi|121637158|ref|YP_977381.1| - 6.8e-14 52.0 0.0 1.5e-13 50.9 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|121637158|ref|YP_977381.1| - 2.2e-08 34.2 0.7 3.3e-07 30.4 0.7 2.1 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|121637158|ref|YP_977381.1| - 7.5e-08 32.0 0.0 1.5e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|121637158|ref|YP_977381.1| - 0.00014 21.4 0.0 0.0003 20.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|121637158|ref|YP_977381.1| - 0.0019 17.8 1.7 0.0032 17.1 0.7 1.8 2 1 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|121637158|ref|YP_977381.1| - 0.0027 16.9 0.4 0.0045 16.2 0.2 1.5 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_26 PF13500.6 gi|121637158|ref|YP_977381.1| - 0.075 12.8 1.9 6.8 6.5 0.1 2.4 2 0 0 2 2 2 0 AAA domain VirC1 PF07015.11 gi|121637158|ref|YP_977381.1| - 0.082 12.2 1.0 0.094 12.0 0.1 1.5 2 0 0 2 2 2 0 VirC1 protein CLP1_P PF16575.5 gi|121637158|ref|YP_977381.1| - 0.14 11.9 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop APS_kinase PF01583.20 gi|121637158|ref|YP_977381.1| - 0.15 11.9 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase DUF1073 PF06381.11 gi|121637158|ref|YP_977381.1| - 0.17 10.6 0.0 0.42 9.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1073) CBP_BcsQ PF06564.12 gi|121637158|ref|YP_977381.1| - 0.25 10.8 0.9 6.4 6.2 0.5 2.3 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ BAT PF15915.5 gi|121637158|ref|YP_977381.1| - 0.49 10.3 4.4 0.32 10.9 0.4 2.3 3 0 0 3 3 2 0 GAF and HTH_10 associated domain SLT_2 PF13406.6 gi|121637159|ref|YP_977382.1| - 2e-09 37.1 3.1 2.4e-08 33.5 0.3 2.1 1 1 1 2 2 2 2 Transglycosylase SLT domain SLT PF01464.20 gi|121637159|ref|YP_977382.1| - 0.044 13.4 0.0 0.094 12.4 0.0 1.6 1 1 0 1 1 1 0 Transglycosylase SLT domain DUF1003 PF06210.11 gi|121637160|ref|YP_977383.1| - 4.7e-36 123.0 0.0 8.9e-36 122.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1003) MgtE_N PF03448.17 gi|121637161|ref|YP_977384.1| - 1.3e-23 83.5 1.2 3e-23 82.4 1.2 1.6 1 0 0 1 1 1 1 MgtE intracellular N domain CBS PF00571.28 gi|121637161|ref|YP_977384.1| - 1.9e-13 50.7 0.3 1.8e-06 28.3 0.1 3.1 2 0 0 2 2 2 2 CBS domain FliG_M PF14841.6 gi|121637161|ref|YP_977384.1| - 0.00095 19.3 0.7 0.049 13.8 0.4 3.0 1 1 2 3 3 3 2 FliG middle domain FliG_N PF14842.6 gi|121637161|ref|YP_977384.1| - 0.0085 16.6 0.2 0.33 11.5 0.1 2.8 1 1 1 2 2 2 1 FliG N-terminal domain FliG_C PF01706.16 gi|121637161|ref|YP_977384.1| - 0.073 13.3 0.2 0.66 10.2 0.2 2.4 2 0 0 2 2 2 0 FliG C-terminal domain PRC PF05239.16 gi|121637161|ref|YP_977384.1| - 0.11 12.5 0.0 0.48 10.5 0.0 2.0 2 0 0 2 2 2 0 PRC-barrel domain DUF4190 PF13828.6 gi|121637162|ref|YP_977385.1| - 1.2e-17 63.4 13.2 1.6e-17 63.0 13.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4190) Phage_holin_2_1 PF04971.12 gi|121637163|ref|YP_977386.1| - 0.0067 16.4 1.5 0.013 15.4 1.5 1.5 1 0 0 1 1 1 1 Bacteriophage P21 holin S FecCD PF01032.18 gi|121637163|ref|YP_977386.1| - 0.014 14.4 2.1 0.019 14.0 2.1 1.1 1 0 0 1 1 1 0 FecCD transport family Romo1 PF10247.9 gi|121637163|ref|YP_977386.1| - 1.5 9.2 6.1 5.9 7.3 0.8 2.3 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 SBP_bac_1 PF01547.25 gi|121637164|ref|YP_977387.1| - 5.1e-31 108.8 1.1 6.6e-31 108.4 0.3 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|121637164|ref|YP_977387.1| - 6.6e-15 55.7 0.0 1.6e-14 54.4 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|121637165|ref|YP_977388.1| - 7.6e-12 45.3 13.4 7.6e-12 45.3 13.4 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121637166|ref|YP_977389.1| - 1.3e-21 77.2 19.8 1.3e-21 77.2 19.8 1.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Borrelia_P83 PF05262.11 gi|121637166|ref|YP_977389.1| - 0.37 9.2 0.0 0.49 8.8 0.0 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein ABC_tran PF00005.27 gi|121637167|ref|YP_977390.1| - 7.4e-30 104.3 0.0 1.2e-29 103.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|121637167|ref|YP_977390.1| - 4.1e-12 46.8 0.6 2.2e-11 44.4 0.2 2.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 gi|121637167|ref|YP_977390.1| - 5.9e-06 26.4 1.6 0.027 14.6 0.2 3.3 2 1 0 2 2 2 1 TOBE domain RsgA_GTPase PF03193.16 gi|121637167|ref|YP_977390.1| - 0.00041 20.3 0.0 0.0011 19.0 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 gi|121637167|ref|YP_977390.1| - 0.00048 20.0 0.0 0.25 11.1 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|121637167|ref|YP_977390.1| - 0.00078 19.4 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 gi|121637167|ref|YP_977390.1| - 0.0017 17.8 0.0 0.0038 16.7 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|121637167|ref|YP_977390.1| - 0.0033 17.7 0.1 0.0056 16.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637167|ref|YP_977390.1| - 0.006 17.0 0.1 0.012 16.0 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|121637167|ref|YP_977390.1| - 0.0094 16.4 0.0 0.018 15.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CysA_C_terminal PF17850.1 gi|121637167|ref|YP_977390.1| - 0.022 15.3 0.4 0.15 12.7 0.1 2.6 3 0 0 3 3 2 0 CysA C-terminal regulatory domain TOBE PF03459.17 gi|121637167|ref|YP_977390.1| - 0.037 14.3 1.8 1 9.7 0.4 3.2 3 0 0 3 3 3 0 TOBE domain AAA_25 PF13481.6 gi|121637167|ref|YP_977390.1| - 0.037 13.6 0.1 0.16 11.5 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|121637167|ref|YP_977390.1| - 0.046 13.4 0.0 0.097 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|121637167|ref|YP_977390.1| - 0.052 12.9 0.0 0.091 12.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 gi|121637167|ref|YP_977390.1| - 0.061 12.4 0.0 0.12 11.5 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.6 gi|121637167|ref|YP_977390.1| - 0.088 13.0 0.0 0.26 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|121637167|ref|YP_977390.1| - 0.095 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Mur_ligase_M PF08245.12 gi|121637167|ref|YP_977390.1| - 0.12 12.3 0.2 0.41 10.6 0.0 1.9 3 0 0 3 3 3 0 Mur ligase middle domain AAA_23 PF13476.6 gi|121637167|ref|YP_977390.1| - 0.13 12.7 0.1 0.23 11.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|121637167|ref|YP_977390.1| - 0.22 11.3 0.2 0.59 9.9 0.1 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain CorA PF01544.18 gi|121637168|ref|YP_977391.1| - 4.4e-65 219.9 0.0 5.2e-65 219.6 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Phasin PF05597.11 gi|121637168|ref|YP_977391.1| - 0.096 12.7 0.2 0.22 11.5 0.2 1.6 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Ldh_1_C PF02866.18 gi|121637169|ref|YP_977392.1| - 7.4e-33 113.8 0.0 1e-32 113.4 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 gi|121637169|ref|YP_977392.1| - 1.4e-30 106.2 0.0 2.5e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain RHH_1 PF01402.21 gi|121637170|ref|YP_977393.1| - 0.0079 16.1 0.7 0.0079 16.1 0.7 1.9 2 1 1 3 3 3 1 Ribbon-helix-helix protein, copG family VapB_antitoxin PF09957.9 gi|121637170|ref|YP_977393.1| - 0.8 9.7 8.1 0.48 10.4 2.5 3.0 2 1 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB PIN PF01850.21 gi|121637171|ref|YP_977394.1| - 2.6e-06 27.9 0.0 3e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 PIN domain PE PF00934.20 gi|121637172|ref|YP_977395.1| - 7.5e-33 112.7 22.4 7.5e-33 112.7 22.4 1.6 2 0 0 2 2 2 1 PE family OpuAC PF04069.12 gi|121637173|ref|YP_977396.1| - 6.8e-29 101.2 2.3 2.5e-28 99.4 2.3 1.7 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system adh_short PF00106.25 gi|121637174|ref|YP_977397.1| - 4.4e-50 169.9 1.2 5.7e-50 169.5 1.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637174|ref|YP_977397.1| - 8.6e-35 120.4 3.4 1e-34 120.2 3.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637174|ref|YP_977397.1| - 2.3e-13 50.5 0.3 4.1e-13 49.6 0.3 1.3 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 gi|121637174|ref|YP_977397.1| - 0.00022 21.2 1.6 0.0086 16.0 0.2 2.1 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|121637174|ref|YP_977397.1| - 0.015 14.6 0.0 0.036 13.4 0.0 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CbiA PF01656.23 gi|121637174|ref|YP_977397.1| - 0.017 15.2 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AdoHcyase_NAD PF00670.21 gi|121637174|ref|YP_977397.1| - 0.035 14.2 0.8 0.12 12.5 0.8 1.8 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Epimerase PF01370.21 gi|121637174|ref|YP_977397.1| - 0.11 11.9 0.1 0.26 10.7 0.1 1.6 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family ParE_toxin PF05016.15 gi|121637175|ref|YP_977398.1| - 4.7e-10 39.9 0.2 5.7e-10 39.7 0.2 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ParE-like_toxin PF15781.5 gi|121637175|ref|YP_977398.1| - 0.038 14.0 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 ParE-like toxin of type II bacterial toxin-antitoxin system YoeB_toxin PF06769.14 gi|121637175|ref|YP_977398.1| - 0.088 12.9 0.1 0.15 12.1 0.1 1.3 1 1 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system PhdYeFM_antitox PF02604.19 gi|121637176|ref|YP_977399.1| - 1.2e-21 76.3 0.1 1.4e-21 76.0 0.1 1.1 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system E1_dh PF00676.20 gi|121637177|ref|YP_977400.1| - 1.8e-57 194.6 0.0 3.8e-57 193.5 0.0 1.5 2 0 0 2 2 2 1 Dehydrogenase E1 component 2-oxoacid_dh PF00198.23 gi|121637177|ref|YP_977400.1| - 2.6e-55 187.4 0.0 3.9e-55 186.8 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Transket_pyr PF02779.24 gi|121637177|ref|YP_977400.1| - 1.1e-53 181.6 0.0 1.7e-53 181.0 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 gi|121637177|ref|YP_977400.1| - 7.9e-41 139.3 0.0 1.2e-40 138.6 0.0 1.3 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal 2-oxogl_dehyd_N PF16078.5 gi|121637177|ref|YP_977400.1| - 3.5e-05 23.3 0.6 3.5e-05 23.3 0.6 1.9 2 0 0 2 2 2 1 2-oxoglutarate dehydrogenase N-terminus EcsC PF12787.7 gi|121637178|ref|YP_977401.1| - 0.0094 15.6 0.2 0.017 14.8 0.0 1.6 2 0 0 2 2 2 1 EcsC protein family HTH_32 PF13565.6 gi|121637178|ref|YP_977401.1| - 0.013 16.1 0.7 0.29 11.8 0.7 2.5 1 1 0 1 1 1 0 Homeodomain-like domain TetR_C_30 PF17939.1 gi|121637178|ref|YP_977401.1| - 0.029 14.6 0.1 0.064 13.5 0.1 1.7 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain UCR_Fe-S_N PF10399.9 gi|121637178|ref|YP_977401.1| - 0.22 10.9 3.3 0.24 10.8 0.7 2.3 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MFS_1 PF07690.16 gi|121637179|ref|YP_977402.1| - 6.3e-52 176.7 59.2 2.1e-51 175.0 56.8 2.6 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|121637179|ref|YP_977402.1| - 2.8e-08 33.0 16.1 2.8e-08 33.0 16.1 2.5 2 0 0 2 2 2 1 Sugar (and other) transporter TRI12 PF06609.13 gi|121637179|ref|YP_977402.1| - 3.6e-06 25.7 17.2 7.8e-06 24.6 17.2 1.4 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) PUCC PF03209.15 gi|121637179|ref|YP_977402.1| - 4.9e-06 25.8 11.9 4.9e-06 25.8 11.9 3.4 3 1 1 4 4 4 1 PUCC protein LacY_symp PF01306.19 gi|121637179|ref|YP_977402.1| - 0.00072 18.4 5.4 0.0014 17.5 1.5 2.2 2 0 0 2 2 2 1 LacY proton/sugar symporter SKG6 PF08693.10 gi|121637179|ref|YP_977402.1| - 0.42 10.1 4.1 2 7.9 4.1 2.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain AAA_12 PF13087.6 gi|121637180|ref|YP_977403.1| - 4.4e-24 85.2 0.0 3.7e-23 82.2 0.0 2.3 2 1 0 2 2 2 1 AAA domain RNase_H_2 PF13482.6 gi|121637180|ref|YP_977403.1| - 1.2e-17 64.4 0.0 1.8e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily AAA_30 PF13604.6 gi|121637180|ref|YP_977403.1| - 2e-13 50.5 0.1 6.8e-13 48.8 0.1 1.9 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|121637180|ref|YP_977403.1| - 9.3e-13 48.6 0.0 3.7e-05 23.6 0.0 2.9 3 0 0 3 3 3 2 AAA domain AAA_19 PF13245.6 gi|121637180|ref|YP_977403.1| - 1.4e-07 32.0 0.0 3.9e-07 30.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|121637180|ref|YP_977403.1| - 2.1e-06 27.4 0.0 5.6e-06 26.1 0.0 1.8 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Helicase_RecD PF05127.14 gi|121637180|ref|YP_977403.1| - 5.8e-06 26.3 0.0 1.1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Helicase Viral_helicase1 PF01443.18 gi|121637180|ref|YP_977403.1| - 3.2e-05 23.8 0.0 0.033 13.9 0.0 3.1 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 gi|121637180|ref|YP_977403.1| - 0.00071 19.9 0.0 0.0027 18.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121637180|ref|YP_977403.1| - 0.0028 18.1 0.0 0.0078 16.6 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PDDEXK_1 PF12705.7 gi|121637180|ref|YP_977403.1| - 0.0035 17.3 0.0 0.0073 16.2 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_16 PF13191.6 gi|121637180|ref|YP_977403.1| - 0.0066 16.9 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 AAA ATPase domain ResIII PF04851.15 gi|121637180|ref|YP_977403.1| - 0.016 15.2 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_33 PF13671.6 gi|121637180|ref|YP_977403.1| - 0.048 13.8 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|121637180|ref|YP_977403.1| - 0.048 12.9 0.0 0.14 11.3 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) DUF4226 PF10774.9 gi|121637180|ref|YP_977403.1| - 0.061 13.6 0.4 0.15 12.4 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4226) PhoH PF02562.16 gi|121637180|ref|YP_977403.1| - 0.24 10.8 0.0 0.46 9.9 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein Lipoprotein_21 PF14041.6 gi|121637181|ref|YP_977404.1| - 4.4e-14 52.4 0.3 2.3e-13 50.1 0.3 2.1 1 1 0 1 1 1 1 LppP/LprE lipoprotein DUF3558 PF12079.8 gi|121637181|ref|YP_977404.1| - 1.3 9.0 16.3 1.4 8.9 15.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3558) DEAD PF00270.29 gi|121637182|ref|YP_977405.1| - 4e-50 170.0 0.1 9.2e-49 165.6 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121637182|ref|YP_977405.1| - 1.2e-28 99.7 0.0 4.5e-28 97.8 0.1 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.15 gi|121637182|ref|YP_977405.1| - 6.2e-20 71.0 0.0 1.9e-19 69.4 0.0 1.9 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.15 gi|121637182|ref|YP_977405.1| - 0.0004 20.4 0.0 0.00096 19.2 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit FtsK_4TM PF13491.6 gi|121637182|ref|YP_977405.1| - 0.034 13.8 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE HEM4 PF02602.15 gi|121637182|ref|YP_977405.1| - 0.04 13.3 1.4 0.12 11.7 0.3 2.0 2 0 0 2 2 2 0 Uroporphyrinogen-III synthase HemD B_solenoid_dext PF18841.1 gi|121637182|ref|YP_977405.1| - 0.22 11.8 0.0 0.49 10.7 0.0 1.5 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase Acyl_transf_3 PF01757.22 gi|121637183|ref|YP_977406.1| - 6.6e-28 97.7 39.7 7.8e-28 97.5 39.7 1.0 1 0 0 1 1 1 1 Acyltransferase family Gemini_mov PF01708.16 gi|121637183|ref|YP_977406.1| - 0.29 10.9 0.1 0.29 10.9 0.1 2.9 4 0 0 4 4 4 0 Geminivirus putative movement protein TORC_C PF12886.7 gi|121637184|ref|YP_977407.1| - 0.065 13.8 0.0 0.086 13.4 0.0 1.3 1 0 0 1 1 1 0 Transducer of regulated CREB activity, C terminus MFS_1 PF07690.16 gi|121637185|ref|YP_977408.1| - 6.5e-35 120.7 70.6 2.1e-26 92.7 45.6 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|121637185|ref|YP_977408.1| - 4.9e-19 68.1 33.3 6.5e-19 67.7 33.3 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector Sugar_tr PF00083.24 gi|121637185|ref|YP_977408.1| - 0.00022 20.2 20.3 0.034 13.0 0.8 3.0 2 1 0 2 2 2 2 Sugar (and other) transporter CAAD PF14159.6 gi|121637185|ref|YP_977408.1| - 0.044 13.6 0.6 0.32 10.8 0.6 2.5 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase UDG PF03167.19 gi|121637186|ref|YP_977409.1| - 2.9e-29 102.1 0.0 3.9e-29 101.6 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily FAD_binding_3 PF01494.19 gi|121637187|ref|YP_977410.1| - 9.7e-13 48.1 0.0 1.3e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|121637187|ref|YP_977410.1| - 7.6e-05 22.2 0.2 0.00014 21.4 0.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121637187|ref|YP_977410.1| - 0.00012 21.4 0.1 0.00076 18.8 0.1 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121637187|ref|YP_977410.1| - 0.00016 21.8 0.7 0.00042 20.5 0.2 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121637187|ref|YP_977410.1| - 0.0045 16.6 1.4 0.021 14.4 0.4 2.1 1 1 1 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|121637187|ref|YP_977410.1| - 0.0086 16.6 0.1 0.02 15.4 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121637187|ref|YP_977410.1| - 0.029 13.6 0.1 0.041 13.1 0.1 1.2 1 0 0 1 1 1 0 Thi4 family Pyr_redox_3 PF13738.6 gi|121637187|ref|YP_977410.1| - 0.078 12.2 0.0 2.9 7.1 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121637187|ref|YP_977410.1| - 0.25 10.4 0.4 0.36 9.9 0.4 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|121637188|ref|YP_977411.1| - 4.2e-06 26.2 0.1 6.4e-06 25.6 0.1 1.3 1 1 0 1 1 1 1 FAD binding domain Aldose_epim PF01263.20 gi|121637188|ref|YP_977411.1| - 0.037 13.3 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Aldose 1-epimerase SE PF08491.10 gi|121637188|ref|YP_977411.1| - 0.22 10.5 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 Squalene epoxidase F420H2_quin_red PF04075.14 gi|121637189|ref|YP_977412.1| - 5.6e-56 188.2 0.1 6.6e-56 188.0 0.1 1.0 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase HIT PF01230.23 gi|121637190|ref|YP_977413.1| - 1.9e-27 95.9 0.0 2.3e-27 95.6 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|121637190|ref|YP_977413.1| - 5.2e-11 43.0 0.0 6.6e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|121637190|ref|YP_977413.1| - 0.21 11.5 0.0 0.3 11.0 0.0 1.4 1 1 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 Amidase PF01425.21 gi|121637191|ref|YP_977414.1| - 1.7e-98 330.5 0.0 3.2e-98 329.6 0.0 1.4 1 1 0 1 1 1 1 Amidase Ad_Cy_reg PF16701.5 gi|121637192|ref|YP_977415.1| - 2.1e-82 275.4 6.1 2.9e-82 275.0 6.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase regulatory domain Guanylate_cyc PF00211.20 gi|121637192|ref|YP_977415.1| - 2.4e-14 53.4 0.0 5.8e-14 52.1 0.0 1.6 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain FeoA PF04023.14 gi|121637192|ref|YP_977415.1| - 0.032 14.5 0.3 0.2 12.0 0.1 2.5 2 0 0 2 2 2 0 FeoA domain PknH_C PF14032.6 gi|121637194|ref|YP_977417.1| - 1.1e-54 185.2 5.5 2.3e-54 184.2 5.5 1.6 1 0 0 1 1 1 1 PknH-like extracellular domain Pkinase PF00069.25 gi|121637194|ref|YP_977417.1| - 8.3e-45 153.2 0.0 1.1e-44 152.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121637194|ref|YP_977417.1| - 9.4e-31 107.0 0.0 1.3e-30 106.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121637194|ref|YP_977417.1| - 1.4e-05 25.2 0.3 0.00011 22.3 0.2 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|121637194|ref|YP_977417.1| - 7.3e-05 21.7 0.0 0.00011 21.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 gi|121637194|ref|YP_977417.1| - 0.00014 21.2 0.0 0.0003 20.2 0.0 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 gi|121637194|ref|YP_977417.1| - 0.11 12.1 0.0 0.38 10.3 0.0 1.7 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 BTAD PF03704.17 gi|121637195|ref|YP_977418.1| - 5.4e-48 163.1 2.9 9.7e-48 162.3 2.9 1.4 1 0 0 1 1 1 1 Bacterial transcriptional activator domain FHA PF00498.26 gi|121637195|ref|YP_977418.1| - 6.8e-16 58.4 4.1 1.2e-15 57.6 4.1 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|121637195|ref|YP_977418.1| - 1.6e-12 47.6 0.1 3.1e-12 46.6 0.1 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Trans_reg_C PF00486.28 gi|121637195|ref|YP_977418.1| - 1.4e-11 44.3 0.0 3.1e-11 43.2 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal TPR_14 PF13428.6 gi|121637195|ref|YP_977418.1| - 1 10.4 8.6 9.3 7.4 0.4 3.7 3 1 1 4 4 4 0 Tetratricopeptide repeat Peptidase_C39_2 PF13529.6 gi|121637196|ref|YP_977419.1| - 1e-08 35.8 0.3 1.5e-08 35.3 0.3 1.2 1 0 0 1 1 1 1 Peptidase_C39 like family BtrH_N PF14399.6 gi|121637196|ref|YP_977419.1| - 0.093 13.0 0.4 0.43 10.8 0.3 1.9 1 1 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal EII-Sor PF03609.14 gi|121637196|ref|YP_977419.1| - 0.64 9.4 4.0 7 6.0 0.2 2.1 2 0 0 2 2 2 0 PTS system sorbose-specific iic component DUF4189 PF13827.6 gi|121637197|ref|YP_977420.1| - 1.1e-18 67.5 5.0 1.1e-18 67.5 5.0 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4189) LppX_LprAFG PF07161.13 gi|121637198|ref|YP_977421.1| - 4.9e-67 225.5 6.2 5.9e-67 225.2 6.2 1.1 1 0 0 1 1 1 1 LppX_LprAFG lipoprotein DUF2092 PF09865.9 gi|121637198|ref|YP_977421.1| - 0.062 12.6 0.2 1.1 8.6 0.0 2.1 2 0 0 2 2 2 0 Predicted periplasmic protein (DUF2092) DUF732 PF05305.14 gi|121637199|ref|YP_977422.1| - 3.5e-23 81.8 6.2 4.3e-23 81.5 6.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF732) DUF5455 PF17537.2 gi|121637199|ref|YP_977422.1| - 0.028 14.8 0.8 0.045 14.2 0.8 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5455) DUF4907 PF16250.5 gi|121637199|ref|YP_977422.1| - 0.069 13.0 0.5 0.16 11.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4907) ABC_membrane PF00664.23 gi|121637200|ref|YP_977423.1| - 5.1e-66 223.1 4.3 6.7e-66 222.7 4.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|121637200|ref|YP_977423.1| - 1.2e-29 103.5 0.0 2.4e-29 102.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane_2 PF06472.15 gi|121637200|ref|YP_977423.1| - 6.4e-05 22.5 5.2 0.00014 21.4 5.2 1.5 1 1 0 1 1 1 1 ABC transporter transmembrane region 2 SMC_N PF02463.19 gi|121637200|ref|YP_977423.1| - 0.00044 19.8 0.2 0.045 13.2 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|121637200|ref|YP_977423.1| - 0.00049 20.5 0.1 0.0017 18.7 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|121637200|ref|YP_977423.1| - 0.00051 19.8 0.1 0.0016 18.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121637200|ref|YP_977423.1| - 0.00056 20.2 2.1 0.0049 17.1 0.6 2.8 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|121637200|ref|YP_977423.1| - 0.0049 16.8 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|121637200|ref|YP_977423.1| - 0.0077 16.8 0.0 0.014 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121637200|ref|YP_977423.1| - 0.012 16.1 0.0 0.057 13.8 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|121637200|ref|YP_977423.1| - 0.013 15.8 0.2 0.5 10.6 0.2 2.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|121637200|ref|YP_977423.1| - 0.013 15.6 0.0 0.034 14.2 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|121637200|ref|YP_977423.1| - 0.041 14.0 0.1 0.1 12.7 0.1 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 gi|121637200|ref|YP_977423.1| - 0.059 13.1 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain PRTase_1 PF11202.8 gi|121637200|ref|YP_977423.1| - 0.067 12.4 0.2 3.5 6.8 0.1 2.8 3 0 0 3 3 3 0 Phosphoribosyl transferase (PRTase) FtsK_SpoIIIE PF01580.18 gi|121637200|ref|YP_977423.1| - 0.067 12.5 0.1 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family cobW PF02492.19 gi|121637200|ref|YP_977423.1| - 0.078 12.6 0.1 0.17 11.4 0.1 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|121637200|ref|YP_977423.1| - 0.081 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|121637200|ref|YP_977423.1| - 0.093 12.7 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DEAD PF00270.29 gi|121637200|ref|YP_977423.1| - 0.12 12.2 0.0 7.4 6.3 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_33 PF13671.6 gi|121637200|ref|YP_977423.1| - 0.15 12.2 2.1 0.7 10.0 0.4 2.7 2 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|121637200|ref|YP_977423.1| - 0.18 11.3 0.0 0.36 10.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 gi|121637200|ref|YP_977423.1| - 0.2 11.5 1.4 3.3 7.4 0.2 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane PF00664.23 gi|121637201|ref|YP_977424.1| - 3.5e-52 177.8 11.7 4.6e-52 177.4 11.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|121637201|ref|YP_977424.1| - 4.6e-30 104.9 0.0 3.9e-29 101.9 0.0 2.1 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|121637201|ref|YP_977424.1| - 1.7e-08 34.2 0.1 3.5e-05 23.3 0.0 2.3 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 gi|121637201|ref|YP_977424.1| - 0.00021 21.5 0.2 0.00034 20.8 0.2 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|121637201|ref|YP_977424.1| - 0.0018 17.6 0.3 0.0048 16.2 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_29 PF13555.6 gi|121637201|ref|YP_977424.1| - 0.0022 17.7 1.5 0.0044 16.7 0.2 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121637201|ref|YP_977424.1| - 0.017 15.7 0.1 0.027 15.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|121637201|ref|YP_977424.1| - 0.044 13.7 0.0 0.092 12.6 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase cobW PF02492.19 gi|121637201|ref|YP_977424.1| - 0.055 13.1 0.4 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.18 gi|121637201|ref|YP_977424.1| - 0.066 12.6 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 gi|121637201|ref|YP_977424.1| - 0.14 12.3 0.0 0.4 10.8 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|121637201|ref|YP_977424.1| - 0.2 12.0 0.7 0.46 10.9 0.7 1.7 1 1 0 1 1 1 0 AAA ATPase domain DUF3558 PF12079.8 gi|121637202|ref|YP_977425.1| - 1.7e-37 129.1 0.1 1.9e-37 129.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3558) DUF3558 PF12079.8 gi|121637203|ref|YP_977426.1| - 3.3e-29 102.1 0.3 3.7e-29 101.9 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3558) LPAM_1 PF08139.12 gi|121637203|ref|YP_977426.1| - 0.087 13.4 2.8 0.4 11.3 2.8 2.1 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site His_Phos_1 PF00300.22 gi|121637204|ref|YP_977427.1| - 6.6e-07 29.2 1.0 1.8e-06 27.8 0.3 1.8 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) Metallophos PF00149.28 gi|121637205|ref|YP_977428.1| - 4.1e-12 47.0 0.0 5.9e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|121637205|ref|YP_977428.1| - 0.00027 21.2 0.1 0.00059 20.1 0.0 1.7 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain baeRF_family2 PF18844.1 gi|121637205|ref|YP_977428.1| - 0.082 13.0 0.4 0.082 13.0 0.4 2.3 3 0 0 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 2 AAA_15 PF13175.6 gi|121637206|ref|YP_977429.1| - 1.7e-09 37.9 0.0 2.4e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 gi|121637206|ref|YP_977429.1| - 2.7e-08 33.6 0.0 2.7e-08 33.6 0.0 3.4 2 1 0 3 3 3 1 AAA domain AAA_23 PF13476.6 gi|121637206|ref|YP_977429.1| - 8e-07 29.8 0.0 1.9e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|121637206|ref|YP_977429.1| - 8.9e-06 25.3 0.0 0.0088 15.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121637206|ref|YP_977429.1| - 0.00048 19.8 0.0 0.00099 18.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF2813 PF11398.8 gi|121637206|ref|YP_977429.1| - 0.00053 19.4 0.0 0.0012 18.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) HxlR PF01638.17 gi|121637206|ref|YP_977429.1| - 0.037 13.9 0.0 0.09 12.6 0.0 1.6 1 0 0 1 1 1 0 HxlR-like helix-turn-helix GMC_oxred_N PF00732.19 gi|121637207|ref|YP_977430.1| - 8.6e-103 343.8 0.0 1.1e-102 343.5 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 gi|121637207|ref|YP_977430.1| - 1e-37 129.8 0.1 2.2e-37 128.8 0.1 1.6 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|121637207|ref|YP_977430.1| - 0.0017 18.0 4.3 0.0069 16.0 4.3 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121637207|ref|YP_977430.1| - 0.0021 17.3 0.0 0.62 9.2 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|121637207|ref|YP_977430.1| - 0.0026 16.9 0.9 0.48 9.4 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 gi|121637207|ref|YP_977430.1| - 0.027 13.5 0.0 0.042 12.9 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|121637207|ref|YP_977430.1| - 0.073 13.3 0.1 0.23 11.7 0.1 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|121637207|ref|YP_977430.1| - 0.17 11.1 0.1 0.35 10.1 0.1 1.4 1 0 0 1 1 1 0 Thi4 family SBP_bac_5 PF00496.22 gi|121637208|ref|YP_977431.1| - 7.3e-51 173.3 0.5 1e-50 172.8 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.27 gi|121637209|ref|YP_977432.1| - 9e-58 194.7 0.0 6.6e-30 104.4 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|121637209|ref|YP_977432.1| - 2.9e-23 82.1 0.0 1.4e-14 54.3 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|121637209|ref|YP_977432.1| - 3.9e-13 49.9 2.5 0.00013 21.9 0.0 4.0 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637209|ref|YP_977432.1| - 1.6e-08 34.3 0.4 0.0013 18.2 0.0 3.5 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|121637209|ref|YP_977432.1| - 3.9e-07 30.4 0.1 0.0054 17.0 0.0 3.0 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|121637209|ref|YP_977432.1| - 1.2e-06 28.2 0.1 0.019 14.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|121637209|ref|YP_977432.1| - 6.1e-06 26.7 2.1 0.0063 16.9 0.0 2.9 2 1 1 3 3 3 2 AAA ATPase domain AAA_33 PF13671.6 gi|121637209|ref|YP_977432.1| - 9.3e-05 22.6 0.2 0.59 10.3 0.2 2.7 2 1 0 2 2 2 2 AAA domain NACHT PF05729.12 gi|121637209|ref|YP_977432.1| - 0.00027 20.9 0.0 0.24 11.3 0.0 2.4 2 0 0 2 2 2 2 NACHT domain RsgA_GTPase PF03193.16 gi|121637209|ref|YP_977432.1| - 0.00095 19.1 0.2 0.31 10.9 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase PRK PF00485.18 gi|121637209|ref|YP_977432.1| - 0.00099 18.9 0.0 0.044 13.5 0.0 2.2 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family MMR_HSR1 PF01926.23 gi|121637209|ref|YP_977432.1| - 0.0013 18.8 0.2 0.58 10.3 0.0 3.2 2 2 0 2 2 2 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|121637209|ref|YP_977432.1| - 0.0037 16.6 0.6 2.4 7.4 0.1 2.3 2 0 0 2 2 2 2 Zeta toxin AAA_7 PF12775.7 gi|121637209|ref|YP_977432.1| - 0.0063 16.1 0.1 1.7 8.1 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region T2SSE PF00437.20 gi|121637209|ref|YP_977432.1| - 0.0065 15.6 0.1 0.065 12.3 0.1 2.1 2 0 0 2 2 2 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|121637209|ref|YP_977432.1| - 0.0091 15.4 0.2 0.3 10.4 0.1 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_30 PF13604.6 gi|121637209|ref|YP_977432.1| - 0.01 15.6 5.0 0.16 11.7 0.0 2.9 2 1 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|121637209|ref|YP_977432.1| - 0.011 15.1 0.1 0.54 9.6 0.0 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|121637209|ref|YP_977432.1| - 0.014 15.8 0.1 13 6.2 0.1 3.6 2 2 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|121637209|ref|YP_977432.1| - 0.016 14.8 1.0 2 7.9 0.0 3.2 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.17 gi|121637209|ref|YP_977432.1| - 0.017 15.2 2.5 0.085 12.9 0.2 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_5 PF07728.14 gi|121637209|ref|YP_977432.1| - 0.025 14.6 0.6 9 6.3 0.0 2.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF3987 PF13148.6 gi|121637209|ref|YP_977432.1| - 0.048 12.7 0.3 4.6 6.1 0.1 2.4 3 0 0 3 3 2 0 Protein of unknown function (DUF3987) AIG1 PF04548.16 gi|121637209|ref|YP_977432.1| - 0.051 12.9 1.1 2.5 7.4 0.1 2.2 2 0 0 2 2 2 0 AIG1 family AAA_23 PF13476.6 gi|121637209|ref|YP_977432.1| - 0.059 13.9 0.0 2.3 8.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|121637209|ref|YP_977432.1| - 0.072 12.8 1.5 20 4.8 0.0 3.4 4 0 0 4 4 4 0 Sigma-54 interaction domain AAA_24 PF13479.6 gi|121637209|ref|YP_977432.1| - 0.11 12.2 0.2 2.3 7.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|121637209|ref|YP_977432.1| - 0.11 11.6 0.2 4.4 6.4 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain RNA_helicase PF00910.22 gi|121637209|ref|YP_977432.1| - 0.13 12.6 0.1 13 6.2 0.0 2.4 2 0 0 2 2 2 0 RNA helicase AAA_19 PF13245.6 gi|121637209|ref|YP_977432.1| - 0.13 12.6 0.2 4.6 7.6 0.0 2.5 2 1 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 gi|121637209|ref|YP_977432.1| - 0.18 10.7 0.3 0.72 8.7 0.1 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain BPD_transp_1 PF00528.22 gi|121637210|ref|YP_977433.1| - 7.6e-23 81.2 13.3 7.6e-23 81.2 13.3 1.8 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|121637210|ref|YP_977433.1| - 9.1e-09 35.2 1.8 9.1e-09 35.2 1.8 3.4 4 1 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C MFS_1 PF07690.16 gi|121637210|ref|YP_977433.1| - 0.034 13.1 19.6 0.027 13.4 11.3 2.6 2 1 0 2 2 2 0 Major Facilitator Superfamily BPD_transp_1 PF00528.22 gi|121637211|ref|YP_977434.1| - 3.1e-36 124.9 10.4 5.1e-36 124.2 10.4 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Pro_CA PF00484.19 gi|121637212|ref|YP_977435.1| - 3e-13 50.4 0.4 4.6e-12 46.5 0.4 2.0 1 1 0 1 1 1 1 Carbonic anhydrase PAPS_reduct PF01507.19 gi|121637213|ref|YP_977436.1| - 3.8e-50 170.3 0.0 4.7e-50 170.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|121637213|ref|YP_977436.1| - 0.01 15.6 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 0 PP-loop family DpaA_N PF16924.5 gi|121637213|ref|YP_977436.1| - 0.01 15.9 0.0 0.59 10.2 0.0 2.2 2 0 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain Diphthami_syn_2 PF01902.17 gi|121637213|ref|YP_977436.1| - 0.065 12.7 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 Diphthamide synthase QueC PF06508.13 gi|121637213|ref|YP_977436.1| - 0.1 12.1 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC APS_kinase PF01583.20 gi|121637214|ref|YP_977437.1| - 8.8e-68 227.2 0.0 1.7e-67 226.3 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase GTP_EFTU PF00009.27 gi|121637214|ref|YP_977437.1| - 2.3e-39 134.9 0.1 3.3e-39 134.5 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 gi|121637214|ref|YP_977437.1| - 5.1e-07 29.8 0.1 2.4e-05 24.4 0.0 3.1 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|121637214|ref|YP_977437.1| - 3e-06 27.4 0.0 2.8e-05 24.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain GTP_EFTU_D2 PF03144.25 gi|121637214|ref|YP_977437.1| - 1.5e-05 25.3 0.0 7.8e-05 23.0 0.0 2.3 3 0 0 3 3 2 1 Elongation factor Tu domain 2 AAA_16 PF13191.6 gi|121637214|ref|YP_977437.1| - 0.00038 20.9 0.0 0.0013 19.2 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|121637214|ref|YP_977437.1| - 0.0035 17.3 0.1 6.7 6.6 0.0 3.6 2 1 1 3 3 3 1 RsgA GTPase AAA_29 PF13555.6 gi|121637214|ref|YP_977437.1| - 0.038 13.7 0.3 1 9.2 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|121637214|ref|YP_977437.1| - 0.065 12.5 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin KTI12 PF08433.10 gi|121637214|ref|YP_977437.1| - 0.069 12.6 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_18 PF13238.6 gi|121637214|ref|YP_977437.1| - 0.089 13.3 0.0 0.25 11.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|121637214|ref|YP_977437.1| - 0.095 13.2 0.0 0.52 10.8 0.0 2.2 2 0 0 2 2 2 0 ABC transporter Thymidylate_kin PF02223.17 gi|121637214|ref|YP_977437.1| - 0.11 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase Rrf2 PF02082.20 gi|121637215|ref|YP_977438.1| - 2.2e-25 88.8 0.0 3.7e-25 88.1 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 gi|121637215|ref|YP_977438.1| - 0.0056 16.5 0.0 0.0084 16.0 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HrcA_DNA-bdg PF03444.15 gi|121637215|ref|YP_977438.1| - 0.0085 15.7 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Esterase PF00756.20 gi|121637216|ref|YP_977439.1| - 6.2e-68 229.2 0.0 1.3e-67 228.1 0.0 1.5 2 0 0 2 2 2 1 Putative esterase LysM PF01476.20 gi|121637216|ref|YP_977439.1| - 5.5e-18 64.8 0.0 9.7e-10 38.4 0.0 2.4 2 0 0 2 2 2 2 LysM domain Phage_tail_X PF05489.12 gi|121637216|ref|YP_977439.1| - 2.8e-07 30.1 7.0 0.00017 21.2 0.1 3.2 3 1 1 4 4 4 2 Phage Tail Protein X Abhydrolase_1 PF00561.20 gi|121637216|ref|YP_977439.1| - 0.016 14.8 0.1 0.027 14.1 0.1 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Phage_gp53 PF11246.8 gi|121637216|ref|YP_977439.1| - 0.024 14.3 0.2 4.6 6.9 0.0 3.8 4 1 1 5 5 5 0 Base plate wedge protein 53 Hydrolase_4 PF12146.8 gi|121637216|ref|YP_977439.1| - 0.03 13.6 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Asp2 PF16929.5 gi|121637216|ref|YP_977439.1| - 0.21 10.5 1.4 0.29 10.0 1.4 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter DUF2254 PF10011.9 gi|121637218|ref|YP_977441.1| - 3.3e-103 345.3 0.2 4.4e-103 344.9 0.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) DUF732 PF05305.14 gi|121637220|ref|YP_977443.1| - 1.5e-23 83.0 9.3 1.8e-23 82.7 9.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF732) HOASN PF14515.6 gi|121637220|ref|YP_977443.1| - 7 7.1 8.6 2 8.8 2.0 2.1 1 1 1 2 2 2 0 Haem-oxygenase-associated N-terminal helices DALR_1 PF05746.15 gi|121637221|ref|YP_977444.1| - 4e-40 136.7 0.0 7.3e-40 135.9 0.0 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|121637221|ref|YP_977444.1| - 3.9e-23 81.8 0.0 1.5e-22 80.0 0.0 2.1 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1d PF00750.19 gi|121637221|ref|YP_977444.1| - 3.1e-18 65.8 0.0 5.2e-17 61.8 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (R) tRNA-synt_1g PF09334.11 gi|121637221|ref|YP_977444.1| - 4.3e-07 29.0 0.4 0.31 9.7 0.0 3.9 3 1 1 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|121637221|ref|YP_977444.1| - 5.3e-07 28.3 0.0 4.3e-05 22.0 0.0 2.3 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|121637221|ref|YP_977444.1| - 0.0062 15.5 0.0 0.36 9.7 0.0 2.5 3 0 0 3 3 3 1 tRNA synthetases class I (K) Peripla_BP_6 PF13458.6 gi|121637221|ref|YP_977444.1| - 0.0065 16.2 0.1 0.012 15.3 0.1 1.4 1 0 0 1 1 1 1 Periplasmic binding protein Orn_Arg_deC_N PF02784.16 gi|121637222|ref|YP_977445.1| - 1.1e-56 192.0 0.0 1.4e-56 191.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|121637222|ref|YP_977445.1| - 1.2e-14 54.3 0.0 1.6e-14 53.9 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 gi|121637222|ref|YP_977445.1| - 0.00029 20.5 0.3 0.00052 19.7 0.3 1.4 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Homoserine_dh PF00742.19 gi|121637223|ref|YP_977446.1| - 5.9e-66 221.7 0.3 1.2e-65 220.7 0.3 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|121637223|ref|YP_977446.1| - 2.2e-22 79.9 1.5 3.2e-22 79.4 0.6 1.8 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ACT PF01842.25 gi|121637223|ref|YP_977446.1| - 1.8e-10 40.4 2.3 1.9e-10 40.3 0.4 2.0 2 0 0 2 2 2 1 ACT domain PALP PF00291.25 gi|121637224|ref|YP_977447.1| - 4e-71 239.8 6.8 4.6e-71 239.6 6.8 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme GHMP_kinases_N PF00288.26 gi|121637225|ref|YP_977448.1| - 1.8e-10 40.9 3.1 1.8e-10 40.9 3.1 2.5 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|121637225|ref|YP_977448.1| - 0.00018 21.8 0.9 0.0014 19.0 0.0 2.6 3 0 0 3 3 3 1 GHMP kinases C terminal Rho_RNA_bind PF07497.12 gi|121637226|ref|YP_977449.1| - 4.9e-28 96.8 0.1 1.4e-27 95.4 0.1 1.8 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain ATP-synt_ab PF00006.25 gi|121637226|ref|YP_977449.1| - 2.9e-25 89.2 0.0 5e-25 88.4 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain Rho_N PF07498.12 gi|121637226|ref|YP_977449.1| - 1.1e-10 41.2 0.0 1.3e-09 37.8 0.1 2.5 2 0 0 2 2 2 1 Rho termination factor, N-terminal domain AAA_25 PF13481.6 gi|121637226|ref|YP_977449.1| - 4.3e-05 23.2 0.1 0.00026 20.6 0.0 2.3 2 1 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|121637226|ref|YP_977449.1| - 0.0042 17.0 0.0 0.0084 16.0 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 gi|121637226|ref|YP_977449.1| - 0.12 12.8 0.0 0.55 10.7 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) HNF-1_N PF04814.13 gi|121637226|ref|YP_977449.1| - 0.46 11.1 4.4 0.87 10.2 4.4 1.4 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus Ribosomal_L31 PF01197.18 gi|121637227|ref|YP_977450.1| - 1.8e-32 111.3 0.2 2.2e-32 111.1 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L31 DUF1364 PF07102.12 gi|121637227|ref|YP_977450.1| - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) PCRF PF03462.18 gi|121637228|ref|YP_977451.1| - 1.1e-61 208.1 0.3 1.1e-60 204.9 0.0 2.0 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 gi|121637228|ref|YP_977451.1| - 4.3e-39 133.0 1.4 7.1e-39 132.3 1.4 1.3 1 0 0 1 1 1 1 RF-1 domain ABC_tran_CTD PF16326.5 gi|121637228|ref|YP_977451.1| - 0.00046 20.4 4.5 0.09 13.0 0.0 3.4 2 1 1 3 3 3 2 ABC transporter C-terminal domain CHASE3 PF05227.13 gi|121637228|ref|YP_977451.1| - 0.084 12.8 7.2 0.29 11.0 0.4 2.4 2 0 0 2 2 2 0 CHASE3 domain PrmC_N PF17827.1 gi|121637229|ref|YP_977452.1| - 6.1e-13 49.2 0.1 1.3e-12 48.1 0.1 1.6 1 0 0 1 1 1 1 PrmC N-terminal domain Methyltransf_25 PF13649.6 gi|121637229|ref|YP_977452.1| - 1.4e-09 38.5 0.4 5.6e-09 36.6 0.0 2.2 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637229|ref|YP_977452.1| - 1.3e-08 34.8 0.0 2e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121637229|ref|YP_977452.1| - 3.9e-07 29.8 0.0 9.1e-07 28.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|121637229|ref|YP_977452.1| - 1.2e-06 29.1 0.6 2.3e-05 24.9 0.2 2.8 2 1 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.18 gi|121637229|ref|YP_977452.1| - 0.00016 21.4 0.0 0.00034 20.4 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 gi|121637229|ref|YP_977452.1| - 0.00043 19.8 0.0 0.00063 19.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|121637229|ref|YP_977452.1| - 0.092 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Sua5_yciO_yrdC PF01300.18 gi|121637230|ref|YP_977453.1| - 5.6e-45 153.0 0.0 6.5e-45 152.8 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Glycos_transf_4 PF00953.21 gi|121637231|ref|YP_977454.1| - 5.7e-34 117.4 17.2 5.7e-34 117.4 17.2 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 4 ATP-synt_I PF03899.15 gi|121637232|ref|YP_977455.1| - 1.7e-10 41.1 10.7 2.7e-10 40.5 10.7 1.3 1 0 0 1 1 1 1 ATP synthase I chain DUF2070 PF09843.9 gi|121637232|ref|YP_977455.1| - 1.2 7.4 8.3 1.4 7.1 8.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ATP-synt_A PF00119.20 gi|121637233|ref|YP_977456.1| - 9.7e-49 166.2 16.5 1.1e-48 166.0 16.5 1.0 1 0 0 1 1 1 1 ATP synthase A chain DUF2304 PF10066.9 gi|121637233|ref|YP_977456.1| - 0.25 11.6 0.0 0.25 11.6 0.0 3.8 3 1 0 3 3 3 0 Uncharacterized conserved protein (DUF2304) SPW PF03779.14 gi|121637233|ref|YP_977456.1| - 5.7 6.6 10.2 0.22 11.1 1.1 3.0 3 0 0 3 3 3 0 SPW repeat ATP-synt_C PF00137.21 gi|121637234|ref|YP_977457.1| - 5.5e-09 36.2 9.7 8.6e-09 35.6 9.7 1.3 1 0 0 1 1 1 1 ATP synthase subunit C Dip PF17679.1 gi|121637234|ref|YP_977457.1| - 0.47 10.0 1.6 0.6 9.7 1.6 1.1 1 0 0 1 1 1 0 gp37/Dip protein ATP-synt_B PF00430.18 gi|121637235|ref|YP_977458.1| - 8.3e-33 113.3 6.0 1.1e-32 112.9 6.0 1.2 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) DUF3552 PF12072.8 gi|121637235|ref|YP_977458.1| - 0.0019 17.7 7.4 0.039 13.4 3.8 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF3552) HrpE PF06188.12 gi|121637235|ref|YP_977458.1| - 0.035 14.0 7.1 0.051 13.4 7.1 1.3 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E DUF2681 PF10883.8 gi|121637235|ref|YP_977458.1| - 0.079 13.4 2.1 2.1 8.8 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) PepSY_TM PF03929.16 gi|121637235|ref|YP_977458.1| - 0.098 12.3 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 PepSY-associated TM region YMF19 PF02326.15 gi|121637235|ref|YP_977458.1| - 0.11 13.3 0.0 0.21 12.4 0.0 1.4 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF4834 PF16118.5 gi|121637235|ref|YP_977458.1| - 0.11 13.5 0.0 0.18 12.8 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DivIVA PF05103.13 gi|121637235|ref|YP_977458.1| - 2.5 8.2 10.2 0.67 10.0 7.5 1.4 2 0 0 2 2 2 0 DivIVA protein Caudo_TAP PF02413.17 gi|121637235|ref|YP_977458.1| - 7.2 6.8 10.2 7.1 6.8 1.5 2.2 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK OSCP PF00213.18 gi|121637236|ref|YP_977459.1| - 8.4e-29 100.9 6.2 4.4e-28 98.6 0.2 3.1 3 1 0 3 3 3 2 ATP synthase delta (OSCP) subunit ATP-synt_B PF00430.18 gi|121637236|ref|YP_977459.1| - 1e-19 70.9 15.8 1.1e-19 70.8 13.6 2.2 1 1 1 2 2 2 1 ATP synthase B/B' CF(0) RACo_linker PF17650.1 gi|121637236|ref|YP_977459.1| - 0.28 11.0 5.0 4.3 7.3 0.1 3.6 4 0 0 4 4 4 0 RACo linker region TMPIT PF07851.13 gi|121637236|ref|YP_977459.1| - 0.77 8.9 2.0 1.2 8.3 2.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein ATP-synt_ab PF00006.25 gi|121637237|ref|YP_977460.1| - 1e-69 234.5 0.0 1.6e-69 233.8 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 gi|121637237|ref|YP_977460.1| - 6.5e-50 168.7 0.4 1.2e-49 167.9 0.4 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 gi|121637237|ref|YP_977460.1| - 2.5e-17 63.1 2.0 7.3e-17 61.7 2.0 1.8 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_25 PF13481.6 gi|121637237|ref|YP_977460.1| - 0.11 12.1 0.3 0.36 10.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|121637237|ref|YP_977460.1| - 0.13 11.6 0.0 0.41 10.0 0.0 1.9 1 0 0 1 1 1 0 Bacterial TniB protein ATPase PF06745.13 gi|121637237|ref|YP_977460.1| - 0.27 10.5 1.9 0.41 9.9 0.1 2.0 2 0 0 2 2 2 0 KaiC ATP-synt PF00231.19 gi|121637238|ref|YP_977461.1| - 1.6e-90 303.6 0.1 1.8e-90 303.4 0.1 1.0 1 0 0 1 1 1 1 ATP synthase IF-2B PF01008.17 gi|121637238|ref|YP_977461.1| - 0.15 11.3 0.3 0.28 10.3 0.0 1.6 2 0 0 2 2 2 0 Initiation factor 2 subunit family Flagellin_N PF00669.20 gi|121637238|ref|YP_977461.1| - 0.16 12.1 5.7 0.8 9.8 2.1 2.2 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region ATP-synt_ab PF00006.25 gi|121637239|ref|YP_977462.1| - 2e-62 210.6 0.0 3.1e-62 210.0 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|121637239|ref|YP_977462.1| - 6.5e-22 77.8 0.2 1.5e-21 76.7 0.2 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 gi|121637239|ref|YP_977462.1| - 0.0028 17.5 1.4 0.015 15.1 1.4 2.1 1 1 0 1 1 1 1 T3SS EscN ATPase C-terminal domain AAA_19 PF13245.6 gi|121637239|ref|YP_977462.1| - 0.0052 17.1 0.6 0.15 12.4 0.2 2.3 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|121637239|ref|YP_977462.1| - 0.0054 16.7 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|121637239|ref|YP_977462.1| - 0.014 15.8 0.7 0.14 12.6 0.7 2.5 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|121637239|ref|YP_977462.1| - 0.017 15.6 0.0 0.36 11.2 0.0 2.6 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|121637239|ref|YP_977462.1| - 0.026 14.1 0.1 0.067 12.8 0.1 1.7 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|121637239|ref|YP_977462.1| - 0.053 12.7 0.1 0.11 11.6 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|121637239|ref|YP_977462.1| - 0.062 13.2 0.2 0.32 10.9 0.0 2.3 2 1 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 gi|121637239|ref|YP_977462.1| - 0.066 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|121637239|ref|YP_977462.1| - 0.081 13.2 0.1 0.38 11.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|121637239|ref|YP_977462.1| - 0.09 12.1 0.1 0.34 10.2 0.1 1.9 2 0 0 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|121637239|ref|YP_977462.1| - 0.1 13.0 0.0 0.31 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA helicase TsaE PF02367.17 gi|121637239|ref|YP_977462.1| - 0.15 12.0 0.1 0.38 10.8 0.1 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|121637239|ref|YP_977462.1| - 0.22 11.0 0.0 0.47 10.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region ATP-synt_DE_N PF02823.16 gi|121637240|ref|YP_977463.1| - 2.8e-23 81.6 0.2 3.4e-23 81.3 0.2 1.1 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DUF2550 PF10739.9 gi|121637241|ref|YP_977464.1| - 9.4e-41 138.8 0.6 1.1e-40 138.5 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2550) DUF3377 PF11857.8 gi|121637241|ref|YP_977464.1| - 0.4 10.6 1.8 0.44 10.5 0.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) DDE_Tnp_ISL3 PF01610.17 gi|121637242|ref|YP_977465.1| - 3.3e-56 190.7 0.0 3.7e-56 190.5 0.0 1.0 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|121637243|ref|YP_977466.1| - 4.3e-13 48.5 3.9 1.6e-12 46.6 3.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 zf-ISL3 PF14690.6 gi|121637243|ref|YP_977466.1| - 9.7e-10 39.0 1.1 1.7e-09 38.1 0.4 1.8 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE_Tnp_ISL3 PF01610.17 gi|121637243|ref|YP_977466.1| - 5.5e-06 26.3 0.0 8.3e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Transposase ThiP_synth PF10120.9 gi|121637243|ref|YP_977466.1| - 0.055 13.1 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Thiamine-phosphate synthase Cob_adeno_trans PF01923.18 gi|121637244|ref|YP_977467.1| - 2.8e-57 193.4 0.0 3.1e-57 193.3 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase EPSP_synthase PF00275.20 gi|121637245|ref|YP_977468.1| - 4.2e-116 388.1 0.1 4.8e-116 387.9 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNA_binding_1 PF01035.20 gi|121637246|ref|YP_977469.1| - 1.2e-35 121.4 0.0 1.6e-35 121.1 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|121637246|ref|YP_977469.1| - 2.2e-15 57.2 0.0 3.7e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AlkA_N PF06029.11 gi|121637247|ref|YP_977470.1| - 1.7e-29 102.4 0.0 5.4e-29 100.8 0.0 1.9 1 0 0 1 1 1 1 AlkA N-terminal domain Ada_Zn_binding PF02805.16 gi|121637247|ref|YP_977470.1| - 5.2e-28 96.9 6.7 1e-27 96.0 6.7 1.5 1 0 0 1 1 1 1 Metal binding domain of Ada HTH_18 PF12833.7 gi|121637247|ref|YP_977470.1| - 8.2e-15 54.8 0.2 2e-14 53.6 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121637247|ref|YP_977470.1| - 2.2e-07 30.8 0.0 0.00034 20.6 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HhH-GPD PF00730.25 gi|121637247|ref|YP_977470.1| - 2.5e-07 31.1 0.0 9.8e-07 29.2 0.0 2.0 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|121637247|ref|YP_977470.1| - 0.0052 16.6 0.2 0.021 14.7 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif Guanylate_cyc PF00211.20 gi|121637248|ref|YP_977471.1| - 5.4e-21 75.0 0.0 8.9e-21 74.3 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|121637248|ref|YP_977471.1| - 2.1e-08 34.4 0.7 5.6e-08 33.0 0.7 1.8 1 0 0 1 1 1 1 HAMP domain TMEM240 PF15207.6 gi|121637248|ref|YP_977471.1| - 0.21 11.2 2.3 0.27 10.9 1.4 1.6 1 1 0 1 1 1 0 TMEM240 family DUF2937 PF11157.8 gi|121637248|ref|YP_977471.1| - 0.64 9.7 3.6 1.7 8.3 3.6 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) Wzy_C PF04932.15 gi|121637248|ref|YP_977471.1| - 1.6 8.4 10.2 1.3 8.6 1.8 2.4 2 0 0 2 2 2 0 O-Antigen ligase DUF1129 PF06570.11 gi|121637248|ref|YP_977471.1| - 5 6.5 8.4 12 5.3 1.4 2.8 2 1 0 3 3 3 0 Protein of unknown function (DUF1129) DUF1449 PF07290.11 gi|121637248|ref|YP_977471.1| - 8.1 6.0 9.6 0.43 10.2 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1449) Guanylate_cyc PF00211.20 gi|121637249|ref|YP_977472.1| - 2.2e-20 73.1 0.0 3.3e-20 72.5 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|121637249|ref|YP_977472.1| - 7.3e-09 35.9 0.7 3.8e-08 33.6 0.2 2.4 2 0 0 2 2 2 1 HAMP domain Guanylate_cyc PF00211.20 gi|121637250|ref|YP_977473.1| - 8.5e-20 71.1 0.0 1.4e-19 70.5 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|121637250|ref|YP_977473.1| - 4.8e-09 36.5 0.2 1.3e-08 35.1 0.2 1.8 1 0 0 1 1 1 1 HAMP domain NucS PF01939.16 gi|121637251|ref|YP_977474.1| - 7.8e-105 349.3 0.0 8.7e-105 349.1 0.0 1.0 1 0 0 1 1 1 1 Endonuclease NucS UPF0102 PF02021.17 gi|121637251|ref|YP_977474.1| - 0.0086 16.3 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 Glyoxalase_4 PF13669.6 gi|121637253|ref|YP_977476.1| - 8.1e-21 74.3 0.0 1.3e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 gi|121637253|ref|YP_977476.1| - 2.6e-14 53.5 0.0 3.1e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|121637253|ref|YP_977476.1| - 1.3e-10 41.7 0.0 1.7e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_5 PF14696.6 gi|121637253|ref|YP_977476.1| - 0.031 14.5 0.0 0.035 14.3 0.0 1.3 1 1 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Thiolase_N PF00108.23 gi|121637254|ref|YP_977477.1| - 1.1e-95 319.9 4.6 1.1e-95 319.9 2.7 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121637254|ref|YP_977477.1| - 4.9e-43 145.7 1.8 1.1e-42 144.6 1.8 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121637254|ref|YP_977477.1| - 9.3e-05 22.1 1.9 0.0002 21.0 0.4 2.3 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|121637254|ref|YP_977477.1| - 0.0036 17.1 0.2 4.1 7.3 0.1 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF4259 PF14078.6 gi|121637254|ref|YP_977477.1| - 0.49 11.1 2.4 9.6 7.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4259) TPR_20 PF14561.6 gi|121637255|ref|YP_977478.1| - 1.1e-16 61.0 0.6 1.1e-16 61.0 0.6 2.7 3 1 0 3 3 3 1 Tetratricopeptide repeat Thioredoxin PF00085.20 gi|121637255|ref|YP_977478.1| - 1.3e-10 41.2 0.0 2.4e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|121637255|ref|YP_977478.1| - 0.0032 17.9 0.0 0.011 16.2 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain TrbC_Ftype PF09673.10 gi|121637255|ref|YP_977478.1| - 0.014 15.5 0.1 0.045 13.8 0.1 1.9 1 1 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein TPR_19 PF14559.6 gi|121637255|ref|YP_977478.1| - 0.06 13.9 3.6 0.08 13.5 0.1 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|121637255|ref|YP_977478.1| - 0.094 13.6 0.2 0.094 13.6 0.2 3.5 3 2 1 4 4 4 0 Tetratricopeptide repeat PE PF00934.20 gi|121637256|ref|YP_977479.1| - 1.5e-35 121.4 18.5 2.2e-35 120.8 18.5 1.3 1 0 0 1 1 1 1 PE family CBM_48 PF02922.18 gi|121637257|ref|YP_977480.1| - 1.3e-25 89.5 0.0 2.5e-22 79.0 0.0 2.6 2 0 0 2 2 2 2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase_C PF02806.18 gi|121637257|ref|YP_977480.1| - 6.3e-22 77.9 0.0 1.2e-21 77.0 0.0 1.5 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 gi|121637257|ref|YP_977480.1| - 6.3e-16 58.9 0.0 4.2e-10 39.7 0.0 2.4 1 1 1 2 2 2 2 Alpha amylase, catalytic domain Glyco_hydro_70 PF02324.16 gi|121637257|ref|YP_977480.1| - 0.00027 19.3 0.1 0.0013 17.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase family 70 DUF3416 PF11896.8 gi|121637258|ref|YP_977481.1| - 1.6e-56 191.5 0.0 2.3e-56 190.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3416) Alpha-amylase PF00128.24 gi|121637258|ref|YP_977481.1| - 2.2e-08 34.1 0.0 1.3e-06 28.3 0.0 2.2 1 1 1 2 2 2 2 Alpha amylase, catalytic domain GHL6 PF14871.6 gi|121637258|ref|YP_977481.1| - 0.025 14.7 0.0 0.044 13.9 0.0 1.3 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase 6 DUF3417 PF11897.8 gi|121637259|ref|YP_977482.1| - 9.9e-36 122.5 0.0 1.9e-35 121.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3417) Phosphorylase PF00343.20 gi|121637259|ref|YP_977482.1| - 4.6e-28 98.0 0.0 2.2e-19 69.2 0.0 3.3 2 1 0 2 2 2 2 Carbohydrate phosphorylase Helicase_C_2 PF13307.6 gi|121637260|ref|YP_977483.1| - 2.9e-27 95.9 0.0 4.3e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD PF00270.29 gi|121637260|ref|YP_977483.1| - 2.2e-09 37.3 2.4 0.00011 22.0 0.0 2.6 3 0 0 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|121637260|ref|YP_977483.1| - 0.00046 20.2 0.0 0.22 11.5 0.0 2.2 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 gi|121637260|ref|YP_977483.1| - 0.003 17.2 0.0 0.0058 16.3 0.0 1.4 1 0 0 1 1 1 1 DEAD_2 AAA_30 PF13604.6 gi|121637260|ref|YP_977483.1| - 0.031 14.0 8.4 2.3 7.9 0.1 4.2 3 1 1 4 4 4 0 AAA domain HEAT PF02985.22 gi|121637260|ref|YP_977483.1| - 0.11 12.8 2.1 0.63 10.5 0.2 3.4 3 0 0 3 3 3 0 HEAT repeat DUF3638 PF12340.8 gi|121637260|ref|YP_977483.1| - 0.19 11.0 0.0 0.33 10.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) NAPRTase_N PF17767.1 gi|121637261|ref|YP_977484.1| - 1.3e-26 93.4 0.0 2.1e-26 92.8 0.0 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain QRPTase_C PF01729.19 gi|121637261|ref|YP_977484.1| - 2.3e-06 27.5 0.1 3.7e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase PF04095.16 gi|121637261|ref|YP_977484.1| - 0.00024 20.8 0.1 0.00062 19.4 0.1 1.6 1 1 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family ClpS PF02617.17 gi|121637262|ref|YP_977485.1| - 4.3e-21 74.5 0.0 5.7e-21 74.1 0.0 1.1 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS DUF2017 PF09438.10 gi|121637263|ref|YP_977486.1| - 5.7e-59 198.9 0.2 6.7e-59 198.7 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2017) Peptidase_S58 PF03576.14 gi|121637264|ref|YP_977487.1| - 3.1e-72 243.7 10.8 3.7e-72 243.4 10.8 1.0 1 0 0 1 1 1 1 Peptidase family S58 Prok-JAB PF14464.6 gi|121637265|ref|YP_977488.1| - 3.9e-26 91.2 1.6 4.5e-26 91.0 1.6 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 gi|121637265|ref|YP_977488.1| - 0.025 14.6 0.0 0.16 11.9 0.0 1.9 1 1 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease SpoIIP PF07454.11 gi|121637265|ref|YP_977488.1| - 0.051 13.0 0.0 0.051 13.0 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) ThiS PF02597.20 gi|121637266|ref|YP_977489.1| - 2.3e-18 66.6 0.0 2.5e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 ThiS family Lambda_tail_I PF06805.12 gi|121637266|ref|YP_977489.1| - 0.0095 16.3 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Bacteriophage lambda tail assembly protein I PALP PF00291.25 gi|121637267|ref|YP_977490.1| - 8.1e-60 202.7 0.7 1e-59 202.4 0.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Rhomboid PF01694.22 gi|121637268|ref|YP_977491.1| - 1e-25 90.5 18.5 1.4e-25 90.0 18.5 1.2 1 0 0 1 1 1 1 Rhomboid family CBM_1 PF00734.18 gi|121637268|ref|YP_977491.1| - 0.15 12.0 1.1 0.32 11.0 1.1 1.5 1 0 0 1 1 1 0 Fungal cellulose binding domain Asp_Glu_race PF01177.22 gi|121637269|ref|YP_977492.1| - 3.9e-30 105.4 0.0 5.2e-30 105.0 0.0 1.2 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Lactamase_B_2 PF12706.7 gi|121637270|ref|YP_977493.1| - 6.8e-19 68.2 0.3 8.9e-19 67.8 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|121637270|ref|YP_977493.1| - 0.00011 22.2 4.6 0.00013 22.0 3.8 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RNase_PH PF01138.21 gi|121637271|ref|YP_977494.1| - 5.5e-25 88.4 1.0 8.2e-25 87.8 0.1 1.7 2 1 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|121637271|ref|YP_977494.1| - 9.7e-10 38.3 0.1 1.9e-09 37.4 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 COXG PF06240.13 gi|121637271|ref|YP_977494.1| - 0.02 14.6 0.0 0.037 13.8 0.0 1.4 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) Ham1p_like PF01725.16 gi|121637272|ref|YP_977495.1| - 3.4e-57 193.4 0.0 3.8e-57 193.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF3817 PF12823.7 gi|121637273|ref|YP_977496.1| - 6.8e-23 81.3 5.9 8e-23 81.1 5.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3817) SURF1 PF02104.15 gi|121637274|ref|YP_977497.1| - 1.5 9.0 9.7 3 8.1 3.2 2.4 2 1 1 3 3 3 0 SURF1 family PP-binding PF00550.25 gi|121637275|ref|YP_977498.1| - 2.7e-13 50.1 1.8 3.3e-13 49.8 1.8 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site AMP-binding PF00501.28 gi|121637276|ref|YP_977499.1| - 4.7e-49 167.1 0.0 8.5e-49 166.3 0.0 1.4 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121637276|ref|YP_977499.1| - 4.9e-05 24.2 0.2 0.00011 23.1 0.2 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.6 gi|121637276|ref|YP_977499.1| - 0.00024 21.3 0.0 0.00044 20.5 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121637277|ref|YP_977500.1| - 3.2e-32 111.8 8.7 5.2e-32 111.1 8.7 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121637277|ref|YP_977500.1| - 1.1e-15 57.6 0.0 2.1e-15 56.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121637277|ref|YP_977500.1| - 2e-05 25.2 1.0 0.00011 22.9 0.0 2.6 2 1 1 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121637277|ref|YP_977500.1| - 0.00014 22.1 2.6 0.00037 20.8 2.6 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acetyltransf_8 PF13523.6 gi|121637278|ref|YP_977501.1| - 1.1e-44 151.7 0.2 1.5e-44 151.2 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|121637278|ref|YP_977501.1| - 0.0016 19.1 0.3 0.0074 17.0 0.3 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain ABC_tran PF00005.27 gi|121637279|ref|YP_977502.1| - 1.4e-28 100.1 0.0 2.3e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SIP PF04954.13 gi|121637279|ref|YP_977502.1| - 2.4e-23 82.9 0.1 5.5e-23 81.7 0.1 1.6 1 0 0 1 1 1 1 Siderophore-interacting protein ABC_membrane PF00664.23 gi|121637279|ref|YP_977502.1| - 2.9e-15 56.7 1.4 4.2e-15 56.1 1.4 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region FAD_binding_9 PF08021.11 gi|121637279|ref|YP_977502.1| - 4.9e-12 46.1 0.1 2.3e-10 40.7 0.0 2.5 1 1 1 2 2 2 1 Siderophore-interacting FAD-binding domain SMC_N PF02463.19 gi|121637279|ref|YP_977502.1| - 3.2e-06 26.7 0.0 0.0024 17.4 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|121637279|ref|YP_977502.1| - 3.1e-05 24.4 0.9 0.00016 22.1 0.7 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|121637279|ref|YP_977502.1| - 7.5e-05 23.0 0.1 0.00099 19.4 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|121637279|ref|YP_977502.1| - 0.00095 18.9 0.3 0.0031 17.3 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|121637279|ref|YP_977502.1| - 0.001 18.8 0.9 0.0029 17.3 0.1 2.2 3 0 0 3 3 2 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|121637279|ref|YP_977502.1| - 0.0024 17.5 0.1 0.0084 15.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|121637279|ref|YP_977502.1| - 0.003 17.7 0.0 0.007 16.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|121637279|ref|YP_977502.1| - 0.0036 17.1 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|121637279|ref|YP_977502.1| - 0.0051 16.1 0.2 0.013 14.8 0.0 1.6 2 0 0 2 2 2 1 Zeta toxin RsgA_GTPase PF03193.16 gi|121637279|ref|YP_977502.1| - 0.0094 15.9 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_18 PF13238.6 gi|121637279|ref|YP_977502.1| - 0.012 16.2 0.0 0.029 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 gi|121637279|ref|YP_977502.1| - 0.02 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|121637279|ref|YP_977502.1| - 0.034 14.6 0.0 0.46 10.9 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|121637279|ref|YP_977502.1| - 0.096 12.7 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.20 gi|121637279|ref|YP_977502.1| - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase Cytidylate_kin PF02224.18 gi|121637279|ref|YP_977502.1| - 0.13 12.0 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Cytidylate kinase AAA_15 PF13175.6 gi|121637279|ref|YP_977502.1| - 0.15 11.8 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|121637279|ref|YP_977502.1| - 0.18 12.3 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|121637280|ref|YP_977503.1| - 1.2e-35 123.0 0.0 1.8e-35 122.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|121637280|ref|YP_977503.1| - 6.2e-08 32.3 0.2 8.3e-06 25.4 0.2 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121637280|ref|YP_977503.1| - 0.00034 20.3 0.1 0.0011 18.7 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|121637280|ref|YP_977503.1| - 0.001 19.0 0.0 0.014 15.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|121637280|ref|YP_977503.1| - 0.0025 17.6 1.9 0.014 15.1 1.9 2.2 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|121637280|ref|YP_977503.1| - 0.0027 16.6 1.0 0.039 12.8 0.1 2.2 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|121637280|ref|YP_977503.1| - 0.0038 17.7 0.1 0.0064 17.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637280|ref|YP_977503.1| - 0.0062 16.9 3.6 0.0062 16.9 3.6 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|121637280|ref|YP_977503.1| - 0.0087 16.3 0.2 0.22 11.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|121637280|ref|YP_977503.1| - 0.0089 16.0 0.0 0.018 14.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC_membrane PF00664.23 gi|121637280|ref|YP_977503.1| - 0.03 14.0 1.8 0.042 13.5 1.8 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region AAA_33 PF13671.6 gi|121637280|ref|YP_977503.1| - 0.061 13.5 0.2 0.66 10.1 0.1 2.7 2 1 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|121637280|ref|YP_977503.1| - 0.075 12.9 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain Zeta_toxin PF06414.12 gi|121637280|ref|YP_977503.1| - 0.09 12.0 0.0 0.18 11.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin ATP-synt_ab PF00006.25 gi|121637280|ref|YP_977503.1| - 0.14 11.8 0.1 0.28 10.8 0.1 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.6 gi|121637280|ref|YP_977503.1| - 0.16 11.5 3.8 0.32 10.5 0.5 2.8 2 1 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|121637280|ref|YP_977503.1| - 0.18 11.5 0.0 0.25 11.0 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|121637280|ref|YP_977503.1| - 0.43 10.8 1.8 6.6 7.0 1.8 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit adh_short_C2 PF13561.6 gi|121637281|ref|YP_977504.1| - 2.4e-65 220.4 8.1 2.9e-65 220.1 8.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637281|ref|YP_977504.1| - 1.1e-55 188.2 6.1 1.3e-55 187.9 6.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637281|ref|YP_977504.1| - 1.4e-20 73.9 3.7 2.2e-20 73.3 3.7 1.3 1 0 0 1 1 1 1 KR domain 3Beta_HSD PF01073.19 gi|121637281|ref|YP_977504.1| - 0.21 10.6 1.5 0.26 10.2 1.5 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family TetR_C_1 PF02909.17 gi|121637284|ref|YP_977507.1| - 3.9e-14 52.7 0.0 5.7e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637284|ref|YP_977507.1| - 8.8e-12 44.6 0.0 1.9e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family EAL PF00563.20 gi|121637285|ref|YP_977508.1| - 4.3e-67 226.1 0.0 8.2e-67 225.2 0.0 1.5 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 gi|121637285|ref|YP_977508.1| - 2.7e-39 134.5 0.0 4.6e-39 133.7 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GAF_2 PF13185.6 gi|121637285|ref|YP_977508.1| - 3.7e-08 33.7 0.2 1.2e-07 32.1 0.2 1.9 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|121637285|ref|YP_977508.1| - 5.4e-07 30.3 0.2 2.4e-06 28.2 0.0 2.2 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.6 gi|121637285|ref|YP_977508.1| - 0.0066 16.8 0.1 0.064 13.6 0.0 2.4 2 0 0 2 2 2 1 GAF domain Autoind_bind PF03472.15 gi|121637285|ref|YP_977508.1| - 0.017 14.6 0.0 0.046 13.2 0.0 1.7 1 0 0 1 1 1 0 Autoinducer binding domain ThiF PF00899.21 gi|121637286|ref|YP_977509.1| - 6.9e-25 87.8 0.0 9e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 ThiF family Nitroreductase PF00881.24 gi|121637286|ref|YP_977509.1| - 1.5e-06 28.4 3.9 0.021 14.9 0.2 3.2 2 1 1 3 3 3 2 Nitroreductase family Cellulase-like PF12876.7 gi|121637286|ref|YP_977509.1| - 0.14 11.4 0.1 0.28 10.5 0.1 1.4 1 0 0 1 1 1 0 Sugar-binding cellulase-like EAL PF00563.20 gi|121637288|ref|YP_977511.1| - 6.4e-65 219.0 0.0 7.6e-65 218.8 0.0 1.1 1 0 0 1 1 1 1 EAL domain GerE PF00196.19 gi|121637289|ref|YP_977512.1| - 3.5e-16 58.5 0.0 8.2e-16 57.3 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|121637289|ref|YP_977512.1| - 0.0002 21.0 0.0 0.00054 19.6 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 AAA_16 PF13191.6 gi|121637289|ref|YP_977512.1| - 0.00025 21.5 0.2 0.00025 21.5 0.2 3.8 4 1 0 4 4 4 1 AAA ATPase domain ANAPC5 PF12862.7 gi|121637289|ref|YP_977512.1| - 0.027 14.6 0.4 0.27 11.3 0.1 2.8 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 NB-ARC PF00931.22 gi|121637289|ref|YP_977512.1| - 0.027 13.7 0.0 0.078 12.1 0.0 1.8 1 1 0 1 1 1 0 NB-ARC domain HTH_40 PF14493.6 gi|121637289|ref|YP_977512.1| - 0.078 13.4 0.2 0.21 12.1 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|121637289|ref|YP_977512.1| - 0.22 11.4 3.4 0.23 11.3 0.0 2.9 3 0 0 3 3 3 0 Homeodomain-like domain Guanylate_cyc PF00211.20 gi|121637290|ref|YP_977513.1| - 0.009 15.7 0.1 0.018 14.6 0.1 1.6 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Bac_luciferase PF00296.20 gi|121637291|ref|YP_977514.1| - 1.6e-61 208.5 3.3 1.9e-61 208.2 3.3 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PPE PF00823.19 gi|121637292|ref|YP_977515.1| - 1.2e-59 200.9 29.7 2.4e-59 200.0 23.1 2.6 2 0 0 2 2 2 2 PPE family PE_PPE_C PF12484.8 gi|121637292|ref|YP_977515.1| - 3.2e-17 63.2 13.5 3.2e-17 63.2 13.5 4.8 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal DUF3239 PF11580.8 gi|121637293|ref|YP_977516.1| - 0.021 15.2 0.2 0.04 14.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) Phage_TAC_9 PF10876.8 gi|121637293|ref|YP_977516.1| - 0.08 13.0 0.0 0.23 11.6 0.0 1.6 1 1 0 1 1 1 0 Phage tail assemb.y chaperone protein, TAC PBP1_TM PF14812.6 gi|121637294|ref|YP_977517.1| - 0.087 13.2 1.8 0.13 12.6 0.4 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Toprim_3 PF13362.6 gi|121637294|ref|YP_977517.1| - 3.1 8.2 11.0 7.8 6.9 3.5 3.3 3 0 0 3 3 3 0 Toprim domain SpoIIE PF07228.12 gi|121637295|ref|YP_977518.1| - 2.3e-41 141.8 0.2 2.7e-40 138.3 0.1 2.2 2 0 0 2 2 2 1 Stage II sporulation protein E (SpoIIE) HATPase_c_2 PF13581.6 gi|121637295|ref|YP_977518.1| - 6e-14 52.1 1.3 1.3e-13 51.0 1.3 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|121637295|ref|YP_977518.1| - 7.9e-13 48.6 0.4 3.2e-12 46.7 0.2 2.2 2 0 0 2 2 2 1 PAS fold STAS_2 PF13466.6 gi|121637295|ref|YP_977518.1| - 2.2e-11 44.0 7.7 8.5e-11 42.1 1.7 3.4 3 0 0 3 3 3 1 STAS domain STAS PF01740.21 gi|121637295|ref|YP_977518.1| - 4.3e-09 36.0 0.0 8.5e-09 35.1 0.0 1.4 1 0 0 1 1 1 1 STAS domain PAS PF00989.25 gi|121637295|ref|YP_977518.1| - 0.0015 18.5 0.0 0.0029 17.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|121637295|ref|YP_977518.1| - 0.01 16.3 1.2 0.1 13.1 0.7 2.6 2 1 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|121637295|ref|YP_977518.1| - 0.022 15.0 0.0 0.041 14.1 0.0 1.5 1 0 0 1 1 1 0 PAS domain STAS PF01740.21 gi|121637296|ref|YP_977519.1| - 3e-17 62.3 0.0 3.4e-17 62.1 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121637296|ref|YP_977519.1| - 9.8e-09 35.4 0.6 1.3e-08 35.0 0.6 1.2 1 0 0 1 1 1 1 STAS domain DNA_pol_B_palm PF14792.6 gi|121637296|ref|YP_977519.1| - 0.034 14.4 0.0 0.064 13.5 0.0 1.5 2 0 0 2 2 2 0 DNA polymerase beta palm RelA_SpoT PF04607.17 gi|121637297|ref|YP_977520.1| - 5.4e-10 39.6 0.0 9e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins HTH_37 PF13744.6 gi|121637297|ref|YP_977520.1| - 0.0037 17.2 0.1 1.7 8.6 0.0 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain Beta-lactamase PF00144.24 gi|121637298|ref|YP_977521.1| - 5.6e-65 219.7 1.3 6.9e-65 219.5 1.3 1.0 1 0 0 1 1 1 1 Beta-lactamase Beta-lactamase2 PF13354.6 gi|121637298|ref|YP_977521.1| - 0.067 12.8 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 Beta-lactamase enzyme family LppX_LprAFG PF07161.13 gi|121637299|ref|YP_977522.1| - 7.5e-70 234.7 4.5 9e-70 234.4 4.5 1.1 1 0 0 1 1 1 1 LppX_LprAFG lipoprotein Cyt-b5 PF00173.28 gi|121637300|ref|YP_977523.1| - 1e-17 64.0 0.0 2.1e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FA_desaturase PF00487.24 gi|121637301|ref|YP_977524.1| - 9.4e-14 51.9 12.7 1.2e-13 51.5 12.7 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Chal_sti_synt_N PF00195.19 gi|121637302|ref|YP_977525.1| - 5.7e-23 81.5 0.1 8.1e-23 81.0 0.1 1.1 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain Chal_sti_synt_C PF02797.15 gi|121637302|ref|YP_977525.1| - 1.3e-21 77.2 0.0 2.2e-21 76.4 0.0 1.4 1 0 0 1 1 1 1 Chalcone and stilbene synthases, C-terminal domain ACP_syn_III_C PF08541.10 gi|121637302|ref|YP_977525.1| - 2.3e-11 43.7 0.4 1.4e-10 41.2 0.1 2.4 3 0 0 3 3 3 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FAE1_CUT1_RppA PF08392.12 gi|121637302|ref|YP_977525.1| - 3.1e-11 43.1 0.7 4.6e-11 42.6 0.7 1.2 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein ACP_syn_III PF08545.10 gi|121637302|ref|YP_977525.1| - 1.4e-08 34.5 1.3 2.9e-08 33.4 1.3 1.5 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sulfotransfer_1 PF00685.27 gi|121637303|ref|YP_977526.1| - 3.8e-59 200.3 0.0 4.8e-59 200.0 0.0 1.0 1 0 0 1 1 1 1 Sulfotransferase domain YcaO PF02624.16 gi|121637305|ref|YP_977528.1| - 1.1e-56 192.5 6.9 1.4e-56 192.1 6.9 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding TfuA PF07812.12 gi|121637306|ref|YP_977529.1| - 6.4e-43 145.3 0.0 1.2e-42 144.4 0.0 1.5 1 0 0 1 1 1 1 TfuA-like protein Methyltransf_25 PF13649.6 gi|121637307|ref|YP_977530.1| - 7.5e-22 77.9 0.0 1.4e-21 77.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637307|ref|YP_977530.1| - 7.3e-18 65.0 0.0 9.9e-18 64.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637307|ref|YP_977530.1| - 2.6e-15 56.5 0.0 3.1e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637307|ref|YP_977530.1| - 3.1e-14 53.5 0.0 7e-14 52.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637307|ref|YP_977530.1| - 1.3e-12 47.8 0.0 2.2e-12 47.1 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|121637307|ref|YP_977530.1| - 4.5e-10 39.6 0.0 2e-09 37.4 0.0 1.8 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) CMAS PF02353.20 gi|121637307|ref|YP_977530.1| - 3.9e-08 32.9 0.0 5e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|121637307|ref|YP_977530.1| - 1.3e-07 31.2 0.0 1.6e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 gi|121637307|ref|YP_977530.1| - 2.3e-07 30.4 0.0 2.9e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|121637307|ref|YP_977530.1| - 6.5e-07 29.1 0.0 8.8e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|121637307|ref|YP_977530.1| - 0.00026 20.9 0.1 0.00048 20.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|121637307|ref|YP_977530.1| - 0.00062 19.4 0.0 0.00077 19.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) UPF0020 PF01170.18 gi|121637307|ref|YP_977530.1| - 0.0021 17.7 0.0 0.0031 17.2 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.10 gi|121637307|ref|YP_977530.1| - 0.0023 17.5 0.1 0.0034 17.0 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|121637307|ref|YP_977530.1| - 0.0098 15.3 0.1 0.014 14.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|121637307|ref|YP_977530.1| - 0.028 14.4 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Mur_ligase PF01225.25 gi|121637307|ref|YP_977530.1| - 0.13 12.6 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain tRNA_U5-meth_tr PF05958.11 gi|121637307|ref|YP_977530.1| - 0.31 10.0 0.0 0.41 9.6 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DUF222 PF02720.17 gi|121637308|ref|YP_977531.1| - 1.8e-14 54.0 31.7 2.5e-14 53.5 31.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637308|ref|YP_977531.1| - 0.002 18.3 0.8 0.0032 17.6 0.8 1.3 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 gi|121637308|ref|YP_977531.1| - 0.011 15.6 0.4 0.019 14.8 0.4 1.4 1 0 0 1 1 1 0 HNH endonuclease Erythro_esteras PF05139.14 gi|121637308|ref|YP_977531.1| - 6.1 6.5 9.0 4.3 7.0 0.6 2.2 1 1 0 2 2 2 0 Erythromycin esterase Pribosyltran PF00156.27 gi|121637309|ref|YP_977532.1| - 1.9e-15 56.8 0.1 2.4e-15 56.4 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121637309|ref|YP_977532.1| - 0.017 14.6 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase OTCace_N PF02729.21 gi|121637310|ref|YP_977533.1| - 4.7e-40 137.0 0.0 7.5e-40 136.3 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|121637310|ref|YP_977533.1| - 1.1e-20 74.3 0.0 3e-20 72.9 0.0 1.7 1 1 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amidohydro_1 PF01979.20 gi|121637311|ref|YP_977534.1| - 5.3e-23 81.9 0.4 2.9e-22 79.5 0.4 1.9 1 1 0 1 1 1 1 Amidohydrolase family DHOase PF12890.7 gi|121637311|ref|YP_977534.1| - 2.7e-13 50.0 0.0 4.6e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 Dihydro-orotase-like Amidohydro_3 PF07969.11 gi|121637311|ref|YP_977534.1| - 1.8e-11 44.2 7.6 2.5e-06 27.3 0.7 2.5 1 1 1 2 2 2 2 Amidohydrolase family CPSase_sm_chain PF00988.22 gi|121637313|ref|YP_977536.1| - 3.4e-47 159.5 0.0 5.8e-47 158.7 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|121637313|ref|YP_977536.1| - 9.3e-38 129.9 0.0 1.3e-37 129.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121637313|ref|YP_977536.1| - 3.1e-09 36.9 0.1 1.6e-07 31.3 0.1 2.4 2 1 0 2 2 2 1 Peptidase C26 GP38 PF05268.11 gi|121637313|ref|YP_977536.1| - 0.0047 16.6 0.7 0.011 15.4 0.7 1.5 1 0 0 1 1 1 1 Phage tail fibre adhesin Gp38 CPSase_L_D2 PF02786.17 gi|121637314|ref|YP_977537.1| - 1.5e-102 341.5 0.0 3e-65 219.7 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|121637314|ref|YP_977537.1| - 2.4e-36 124.8 0.0 4.8e-36 123.8 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|121637314|ref|YP_977537.1| - 1e-21 76.9 0.0 3.4e-21 75.2 0.0 2.0 1 0 0 1 1 1 1 MGS-like domain ATP-grasp PF02222.22 gi|121637314|ref|YP_977537.1| - 3.9e-13 49.3 0.0 4.5e-08 32.8 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|121637314|ref|YP_977537.1| - 1.3e-12 47.7 0.0 9.9e-06 25.2 0.0 2.3 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|121637314|ref|YP_977537.1| - 2.9e-09 36.7 0.1 5.1e-05 23.0 0.0 2.9 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|121637314|ref|YP_977537.1| - 1.4e-06 28.5 0.0 0.0003 20.9 0.0 2.5 2 0 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|121637314|ref|YP_977537.1| - 1.7e-06 27.9 0.0 0.0084 15.9 0.0 2.6 2 1 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_2 PF08442.10 gi|121637314|ref|YP_977537.1| - 0.00087 18.9 0.0 0.6 9.6 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|121637314|ref|YP_977537.1| - 0.0009 18.9 0.0 0.019 14.6 0.0 2.7 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|121637314|ref|YP_977537.1| - 0.003 17.0 0.0 0.15 11.5 0.0 2.4 2 0 0 2 2 2 1 ATP-grasp domain OMPdecase PF00215.24 gi|121637315|ref|YP_977538.1| - 5.5e-42 143.9 0.0 6.3e-42 143.7 0.0 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PE PF00934.20 gi|121637316|ref|YP_977539.1| - 4e-21 75.2 9.9 4.7e-21 74.9 9.9 1.1 1 0 0 1 1 1 1 PE family MAAL_C PF07476.11 gi|121637316|ref|YP_977539.1| - 0.06 12.5 0.1 0.092 11.9 0.1 1.2 1 1 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus PPE PF00823.19 gi|121637317|ref|YP_977540.1| - 1e-51 175.2 16.3 1e-51 175.2 16.3 2.4 2 0 0 2 2 2 1 PPE family WXG100 PF06013.12 gi|121637317|ref|YP_977540.1| - 7.8 6.8 10.4 0.043 14.0 1.4 1.9 2 0 0 2 2 2 0 Proteins of 100 residues with WXG Ribosomal_S13 PF00416.22 gi|121637318|ref|YP_977541.1| - 0.055 13.9 0.7 0.18 12.2 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S13/S18 Guanylate_kin PF00625.21 gi|121637319|ref|YP_977542.1| - 5.9e-40 136.9 0.0 7.2e-40 136.6 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase AAA_16 PF13191.6 gi|121637319|ref|YP_977542.1| - 9.5e-07 29.3 0.2 1.7e-06 28.5 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain CPT PF07931.12 gi|121637319|ref|YP_977542.1| - 0.0019 18.1 0.0 0.0037 17.1 0.0 1.6 1 1 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_18 PF13238.6 gi|121637319|ref|YP_977542.1| - 0.0019 18.7 0.0 0.0033 18.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|121637319|ref|YP_977542.1| - 0.0052 16.9 0.0 0.0076 16.3 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|121637319|ref|YP_977542.1| - 0.0054 16.6 0.0 0.014 15.3 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_33 PF13671.6 gi|121637319|ref|YP_977542.1| - 0.036 14.2 0.2 0.16 12.1 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|121637319|ref|YP_977542.1| - 0.078 13.3 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|121637319|ref|YP_977542.1| - 0.084 12.6 0.0 0.37 10.6 0.0 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain Rad17 PF03215.15 gi|121637319|ref|YP_977542.1| - 0.092 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ABC_tran PF00005.27 gi|121637319|ref|YP_977542.1| - 0.17 12.4 0.0 0.24 11.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter RNA_pol_Rpb6 PF01192.22 gi|121637320|ref|YP_977543.1| - 1.3e-14 53.8 0.1 1.9e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 DFP PF04127.15 gi|121637321|ref|YP_977544.1| - 2.1e-65 220.1 1.5 3.2e-65 219.5 0.1 1.8 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|121637321|ref|YP_977544.1| - 8.5e-37 126.3 0.3 1.9e-36 125.2 0.1 1.7 2 0 0 2 2 2 1 Flavoprotein YjeF_N PF03853.15 gi|121637321|ref|YP_977544.1| - 0.02 14.8 2.6 0.11 12.3 0.1 2.8 3 0 0 3 3 3 0 YjeF-related protein N-terminus Imm61 PF15598.6 gi|121637321|ref|YP_977544.1| - 0.16 11.9 0.0 0.36 10.7 0.0 1.6 1 0 0 1 1 1 0 Immunity protein 61 S-AdoMet_synt_C PF02773.16 gi|121637322|ref|YP_977545.1| - 2e-65 219.0 0.0 4.2e-65 217.9 0.0 1.6 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 gi|121637322|ref|YP_977545.1| - 1.1e-44 151.5 0.0 7e-44 148.9 0.0 2.0 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 gi|121637322|ref|YP_977545.1| - 1e-37 128.8 0.2 3.1e-37 127.2 0.0 1.9 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 gi|121637322|ref|YP_977545.1| - 0.064 12.0 0.0 0.12 11.1 0.0 1.4 1 0 0 1 1 1 0 S-adenosylmethionine synthetase (AdoMet synthetase) Pyr_redox_3 PF13738.6 gi|121637323|ref|YP_977546.1| - 9.3e-20 71.1 0.0 9.3e-19 67.8 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|121637323|ref|YP_977546.1| - 2.2e-12 46.8 0.0 1e-09 38.1 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121637323|ref|YP_977546.1| - 3.5e-08 33.6 0.2 3.5e-08 33.6 0.2 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121637323|ref|YP_977546.1| - 9.9e-08 31.9 4.6 0.0031 17.1 1.7 3.2 1 1 2 3 3 3 2 FAD dependent oxidoreductase FMO-like PF00743.19 gi|121637323|ref|YP_977546.1| - 2.8e-07 29.4 0.1 4.8e-06 25.3 0.1 2.5 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 gi|121637323|ref|YP_977546.1| - 2.2e-06 27.0 0.4 0.00018 20.7 0.0 2.5 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|121637323|ref|YP_977546.1| - 0.0002 20.6 0.0 0.00032 19.9 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|121637323|ref|YP_977546.1| - 0.00046 20.7 0.3 1.5 9.4 1.0 2.8 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121637323|ref|YP_977546.1| - 0.0022 17.1 0.5 0.085 11.9 0.4 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|121637323|ref|YP_977546.1| - 0.0061 16.6 4.3 3.5 7.6 0.0 3.9 3 1 0 4 4 4 1 FAD-NAD(P)-binding Amino_oxidase PF01593.24 gi|121637323|ref|YP_977546.1| - 0.015 14.6 3.1 0.025 13.9 0.3 2.4 2 1 0 3 3 3 0 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|121637323|ref|YP_977546.1| - 0.053 12.9 0.4 0.093 12.1 0.4 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 gi|121637323|ref|YP_977546.1| - 0.093 12.1 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|121637323|ref|YP_977546.1| - 0.14 10.9 1.1 13 4.4 0.0 2.6 3 0 0 3 3 3 0 HI0933-like protein p450 PF00067.22 gi|121637324|ref|YP_977547.1| - 4.1e-66 223.6 0.0 6.6e-66 223.0 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 Arabinose_bd PF12625.7 gi|121637325|ref|YP_977548.1| - 6.8e-23 81.7 5.3 1.2e-22 80.9 5.3 1.4 1 0 0 1 1 1 1 Arabinose-binding domain of AraC transcription regulator, N-term HTH_18 PF12833.7 gi|121637325|ref|YP_977548.1| - 4.2e-18 65.4 0.4 8.4e-18 64.4 0.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121637325|ref|YP_977548.1| - 7.5e-10 38.7 0.0 1.6e-06 28.0 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 gi|121637325|ref|YP_977548.1| - 0.00029 20.5 0.0 0.35 10.7 0.0 2.6 2 0 0 2 2 2 2 Homeodomain-like domain HTH_8 PF02954.19 gi|121637325|ref|YP_977548.1| - 0.0042 16.8 0.0 0.014 15.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family HTH_Tnp_ISL3 PF13542.6 gi|121637325|ref|YP_977548.1| - 0.025 14.0 0.8 0.18 11.2 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 PE PF00934.20 gi|121637326|ref|YP_977549.1| - 9.5e-36 122.0 23.3 1.3e-35 121.6 23.3 1.2 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121637326|ref|YP_977549.1| - 0.14 12.6 14.7 0.22 12.0 14.7 1.2 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PIN PF01850.21 gi|121637327|ref|YP_977550.1| - 6.8e-12 46.0 0.0 8.2e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|121637328|ref|YP_977551.1| - 1.3e-10 40.8 0.3 2.1e-10 40.1 0.3 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121637328|ref|YP_977551.1| - 9.8e-07 28.6 0.1 1.3e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 RHH_3 PF12651.7 gi|121637328|ref|YP_977551.1| - 0.0018 18.2 0.1 0.0031 17.4 0.1 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix domain RHH_4 PF13467.6 gi|121637328|ref|YP_977551.1| - 0.0096 15.8 0.1 0.015 15.1 0.1 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix domain DUF1564 PF07600.11 gi|121637328|ref|YP_977551.1| - 0.039 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Abhydrolase_3 PF07859.13 gi|121637329|ref|YP_977552.1| - 1.4e-71 240.7 0.2 2e-71 240.2 0.2 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|121637329|ref|YP_977552.1| - 4.1e-15 55.6 2.3 8.9e-15 54.5 2.3 1.4 1 1 0 1 1 1 1 Carboxylesterase family AXE1 PF05448.12 gi|121637329|ref|YP_977552.1| - 0.027 13.1 1.4 0.33 9.6 0.5 2.1 2 0 0 2 2 2 0 Acetyl xylan esterase (AXE1) Say1_Mug180 PF10340.9 gi|121637329|ref|YP_977552.1| - 0.034 13.0 0.0 0.079 11.8 0.0 1.5 1 1 0 1 1 1 0 Steryl acetyl hydrolase Esterase_phd PF10503.9 gi|121637329|ref|YP_977552.1| - 0.068 12.7 2.8 0.3 10.5 0.2 2.3 1 1 0 2 2 2 0 Esterase PHB depolymerase Peptidase_S9 PF00326.21 gi|121637329|ref|YP_977552.1| - 0.2 11.1 0.1 0.2 11.1 0.1 1.6 2 0 0 2 2 2 0 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 gi|121637330|ref|YP_977553.1| - 9.4e-72 241.3 1.3 1.2e-71 240.9 1.3 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|121637330|ref|YP_977553.1| - 1.5e-11 43.9 0.7 4.3e-11 42.4 0.7 1.6 1 1 0 1 1 1 1 Carboxylesterase family Say1_Mug180 PF10340.9 gi|121637330|ref|YP_977553.1| - 0.0067 15.3 0.0 0.016 14.1 0.0 1.5 1 1 0 1 1 1 1 Steryl acetyl hydrolase Chlorophyllase2 PF12740.7 gi|121637330|ref|YP_977553.1| - 0.0077 15.2 0.0 0.013 14.4 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Peptidase_S9 PF00326.21 gi|121637330|ref|YP_977553.1| - 0.008 15.7 0.1 0.014 14.9 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Phage_tail_APC PF16778.5 gi|121637330|ref|YP_977553.1| - 0.013 15.4 0.3 0.034 14.0 0.1 1.8 2 0 0 2 2 2 0 Phage tail assembly chaperone protein Esterase PF00756.20 gi|121637330|ref|YP_977553.1| - 0.073 12.7 0.9 1.2 8.7 0.9 2.1 1 1 0 1 1 1 0 Putative esterase Peptidase_S15 PF02129.18 gi|121637330|ref|YP_977553.1| - 0.11 12.0 1.1 0.14 11.7 0.1 1.6 2 0 0 2 2 2 0 X-Pro dipeptidyl-peptidase (S15 family) YhhN PF07947.14 gi|121637331|ref|YP_977554.1| - 2.8e-47 160.7 20.2 3.1e-47 160.6 20.2 1.0 1 0 0 1 1 1 1 YhhN family PNTB PF02233.16 gi|121637331|ref|YP_977554.1| - 0.0073 15.3 2.8 0.011 14.7 2.8 1.4 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit RhodobacterPufX PF11511.8 gi|121637331|ref|YP_977554.1| - 0.15 11.7 1.8 0.22 11.2 0.2 2.2 2 0 0 2 2 2 0 Intrinsic membrane protein PufX PriA_3primeBD PF17764.1 gi|121637332|ref|YP_977555.1| - 1.8e-16 59.8 0.0 3.8e-16 58.8 0.0 1.6 1 0 0 1 1 1 1 3′ DNA-binding domain (3′BD) C1_1 PF00130.22 gi|121637332|ref|YP_977555.1| - 1.1 9.2 3.6 0.94 9.4 2.0 1.7 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Methyltransf_25 PF13649.6 gi|121637333|ref|YP_977556.1| - 6e-18 65.3 0.1 8.8e-18 64.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637333|ref|YP_977556.1| - 4.2e-17 62.6 0.0 6e-17 62.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121637333|ref|YP_977556.1| - 2.3e-11 43.5 0.0 3.4e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|121637333|ref|YP_977556.1| - 2.3e-08 34.0 0.0 4.1e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637333|ref|YP_977556.1| - 6.9e-06 26.7 0.0 1e-05 26.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|121637333|ref|YP_977556.1| - 0.00012 21.9 0.0 0.00091 19.0 0.0 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 gi|121637333|ref|YP_977556.1| - 0.00024 21.0 0.0 0.00047 20.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|121637333|ref|YP_977556.1| - 0.0049 16.6 0.0 0.0075 16.0 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|121637333|ref|YP_977556.1| - 0.013 14.9 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|121637333|ref|YP_977556.1| - 0.024 14.2 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain CMAS PF02353.20 gi|121637333|ref|YP_977556.1| - 0.042 13.1 0.0 0.056 12.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|121637333|ref|YP_977556.1| - 0.058 12.8 0.0 0.087 12.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB MarR PF01047.22 gi|121637334|ref|YP_977557.1| - 1.4e-17 63.4 0.0 2.8e-17 62.4 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|121637334|ref|YP_977557.1| - 1.4e-08 34.5 0.1 1.4e-08 34.5 0.1 2.4 2 1 1 3 3 3 1 MarR family HTH_27 PF13463.6 gi|121637334|ref|YP_977557.1| - 5.2e-05 23.7 0.1 0.004 17.6 0.0 2.2 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|121637334|ref|YP_977557.1| - 0.023 14.3 0.0 0.071 12.7 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|121637334|ref|YP_977557.1| - 0.029 14.6 0.0 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain TetR_C_35 PF18556.1 gi|121637334|ref|YP_977557.1| - 0.05 13.8 0.7 0.27 11.4 0.1 2.1 2 0 0 2 2 2 0 Bacterial Tetracyclin repressor, C-terminal domain TrmB PF01978.19 gi|121637334|ref|YP_977557.1| - 0.13 12.1 0.0 0.84 9.6 0.0 2.0 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|121637334|ref|YP_977557.1| - 0.18 11.6 3.7 0.77 9.6 0.1 3.0 3 1 0 3 3 3 0 IclR helix-turn-helix domain Methyltransf_11 PF08241.12 gi|121637335|ref|YP_977558.1| - 2.5e-20 72.9 0.0 7.9e-20 71.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637335|ref|YP_977558.1| - 2.9e-20 72.7 0.1 2.5e-19 69.8 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121637335|ref|YP_977558.1| - 2.9e-15 56.3 0.0 4.3e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|121637335|ref|YP_977558.1| - 2.2e-14 53.5 0.0 3.2e-14 53.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637335|ref|YP_977558.1| - 4.4e-07 30.6 0.0 7.7e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637335|ref|YP_977558.1| - 3.8e-06 26.9 0.0 5.9e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|121637335|ref|YP_977558.1| - 0.00013 21.7 0.0 0.00019 21.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|121637335|ref|YP_977558.1| - 0.00076 18.9 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|121637335|ref|YP_977558.1| - 0.006 16.3 0.2 0.068 12.8 0.2 2.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Met_10 PF02475.16 gi|121637335|ref|YP_977558.1| - 0.0062 16.3 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|121637335|ref|YP_977558.1| - 0.008 15.6 0.1 0.008 15.6 0.1 1.4 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|121637335|ref|YP_977558.1| - 0.0093 15.5 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|121637335|ref|YP_977558.1| - 0.04 13.3 0.0 0.056 12.9 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB AlaDh_PNT_C PF01262.21 gi|121637335|ref|YP_977558.1| - 0.15 11.3 0.6 1 8.6 0.2 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Formyl_trans_N PF00551.19 gi|121637336|ref|YP_977559.1| - 1.5e-31 109.5 0.0 1.8e-31 109.3 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 gi|121637336|ref|YP_977559.1| - 7.9e-21 74.2 0.0 1.2e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain Methyltr_RsmB-F PF01189.17 gi|121637337|ref|YP_977560.1| - 4.3e-66 222.4 0.0 7.1e-66 221.7 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F NusB PF01029.18 gi|121637337|ref|YP_977560.1| - 2e-24 86.4 0.0 2.8e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 NusB family Methyltransf_25 PF13649.6 gi|121637337|ref|YP_977560.1| - 0.00059 20.5 0.0 0.0019 18.9 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637337|ref|YP_977560.1| - 0.005 16.7 0.0 0.047 13.5 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637337|ref|YP_977560.1| - 0.068 13.8 0.0 0.18 12.4 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Phage_TAC_6 PF09550.10 gi|121637337|ref|YP_977560.1| - 0.32 11.4 4.1 0.23 11.9 0.8 2.6 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Ribul_P_3_epim PF00834.19 gi|121637338|ref|YP_977561.1| - 2.4e-83 278.4 0.0 2.8e-83 278.2 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|121637338|ref|YP_977561.1| - 0.0004 20.2 0.0 0.00071 19.4 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain His_biosynth PF00977.21 gi|121637338|ref|YP_977561.1| - 0.0078 15.7 0.1 0.057 12.9 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein OMPdecase PF00215.24 gi|121637338|ref|YP_977561.1| - 0.0092 15.6 0.1 0.015 14.9 0.1 1.4 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.14 gi|121637338|ref|YP_977561.1| - 0.061 12.6 1.4 0.17 11.2 1.2 1.8 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|121637338|ref|YP_977561.1| - 0.24 10.5 0.1 0.42 9.8 0.0 1.4 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase Staphylcoagulse PF04022.12 gi|121637338|ref|YP_977561.1| - 2.5 7.7 5.3 0.26 10.8 0.6 1.7 2 0 0 2 2 2 0 Staphylocoagulase repeat RibD_C PF01872.17 gi|121637339|ref|YP_977562.1| - 2.3e-50 171.2 0.1 3e-50 170.8 0.1 1.2 1 0 0 1 1 1 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 gi|121637339|ref|YP_977562.1| - 3.3e-17 62.2 0.0 5.1e-17 61.6 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|121637339|ref|YP_977562.1| - 2.1e-08 34.0 0.0 3.3e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase MFS_1 PF07690.16 gi|121637340|ref|YP_977563.1| - 1.2e-37 129.7 41.2 8.2e-37 126.9 39.1 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|121637340|ref|YP_977563.1| - 6.5e-10 38.5 7.8 6.5e-10 38.5 7.8 2.8 3 1 0 3 3 3 1 Sugar (and other) transporter TRI12 PF06609.13 gi|121637340|ref|YP_977563.1| - 5.7e-08 31.7 5.9 9.1e-08 31.0 5.9 1.3 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) FtsX PF02687.21 gi|121637340|ref|YP_977563.1| - 0.084 13.4 0.8 0.084 13.4 0.8 6.6 2 1 2 4 4 4 0 FtsX-like permease family LppX_LprAFG PF07161.13 gi|121637341|ref|YP_977564.1| - 2e-78 262.7 2.6 2.3e-78 262.5 2.6 1.0 1 0 0 1 1 1 1 LppX_LprAFG lipoprotein Lum_binding PF00677.17 gi|121637342|ref|YP_977565.1| - 2.9e-49 165.0 0.8 1.4e-24 85.9 0.1 2.0 2 0 0 2 2 2 2 Lumazine binding domain Phage_T4_gp36 PF03903.13 gi|121637342|ref|YP_977565.1| - 0.12 12.3 0.1 0.25 11.3 0.0 1.7 2 0 0 2 2 2 0 Phage T4 tail fibre Ala_racemase_N PF01168.20 gi|121637343|ref|YP_977566.1| - 1.5e-15 57.5 0.0 1.6e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain AP_endonuc_2 PF01261.24 gi|121637343|ref|YP_977566.1| - 0.045 13.2 0.0 0.57 9.6 0.0 2.0 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel D-ser_dehydrat PF14031.6 gi|121637344|ref|YP_977567.1| - 2.5e-20 72.9 0.2 3.1e-20 72.6 0.2 1.1 1 0 0 1 1 1 1 Putative serine dehydratase domain DHBP_synthase PF00926.19 gi|121637345|ref|YP_977568.1| - 2.1e-84 281.8 0.2 3.5e-84 281.1 0.2 1.3 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase GTP_cyclohydro2 PF00925.20 gi|121637345|ref|YP_977568.1| - 2.9e-73 244.8 0.0 6.5e-73 243.7 0.0 1.6 2 0 0 2 2 2 1 GTP cyclohydrolase II DMRL_synthase PF00885.19 gi|121637346|ref|YP_977569.1| - 1.5e-47 161.0 0.4 1.7e-47 160.8 0.4 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase bPH_6 PF10756.9 gi|121637347|ref|YP_977570.1| - 3.9e-24 84.5 2.0 5.9e-24 83.9 2.0 1.3 1 0 0 1 1 1 1 Bacterial PH domain PknH_C PF14032.6 gi|121637348|ref|YP_977571.1| - 0.032 14.1 0.0 0.078 12.8 0.0 1.6 1 0 0 1 1 1 0 PknH-like extracellular domain LPAM_2 PF13627.6 gi|121637348|ref|YP_977571.1| - 5.5 7.0 10.7 4.6 7.2 0.2 2.6 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site Ricin_B_lectin PF00652.22 gi|121637349|ref|YP_977572.1| - 1.7e-18 67.1 0.4 2.1e-18 66.8 0.4 1.1 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 gi|121637349|ref|YP_977572.1| - 0.0014 19.3 3.3 0.31 11.8 0.0 2.9 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like UvrC_HhH_N PF08459.11 gi|121637350|ref|YP_977573.1| - 1.7e-48 164.5 0.0 3.9e-48 163.3 0.0 1.7 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|121637350|ref|YP_977573.1| - 1.3e-10 41.4 0.0 2.7e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 GIY-YIG catalytic domain HHH_2 PF12826.7 gi|121637350|ref|YP_977573.1| - 6.3e-10 39.0 0.0 1.5e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|121637350|ref|YP_977573.1| - 1e-09 38.9 0.0 2.7e-09 37.5 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain UVR PF02151.19 gi|121637350|ref|YP_977573.1| - 3.8e-09 36.0 7.0 9.3e-09 34.8 7.0 1.7 1 0 0 1 1 1 1 UvrB/uvrC motif HHH PF00633.23 gi|121637350|ref|YP_977573.1| - 3.7e-07 29.7 0.3 3.8e-06 26.5 0.2 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|121637350|ref|YP_977573.1| - 0.16 12.5 0.5 28 5.4 0.2 3.2 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold ATP_bind_2 PF03668.15 gi|121637351|ref|YP_977574.1| - 4.2e-140 465.9 0.0 4.7e-140 465.8 0.0 1.0 1 0 0 1 1 1 1 P-loop ATPase protein family AAA_18 PF13238.6 gi|121637351|ref|YP_977574.1| - 0.00039 21.0 0.3 0.0085 16.6 0.3 2.2 1 1 0 1 1 1 1 AAA domain UPF0052 PF01933.18 gi|121637352|ref|YP_977575.1| - 2.4e-70 237.1 0.0 2.8e-70 236.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 LAGLIDADG_WhiA PF14527.6 gi|121637353|ref|YP_977576.1| - 7.2e-24 83.7 0.0 1.7e-23 82.5 0.0 1.6 1 0 0 1 1 1 1 WhiA LAGLIDADG-like domain WhiA_N PF10298.9 gi|121637353|ref|YP_977576.1| - 2.3e-22 78.8 0.1 5.2e-22 77.7 0.1 1.6 1 0 0 1 1 1 1 WhiA N-terminal LAGLIDADG-like domain HTH_WhiA PF02650.14 gi|121637353|ref|YP_977576.1| - 2.2e-20 72.8 0.0 3.4e-20 72.1 0.0 1.3 1 0 0 1 1 1 1 WhiA C-terminal HTH domain WES_acyltransf PF03007.16 gi|121637355|ref|YP_977578.1| - 2.8e-90 302.6 0.8 9.7e-89 297.6 0.0 2.0 2 0 0 2 2 2 2 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121637355|ref|YP_977578.1| - 6.8e-35 120.2 0.0 1.1e-34 119.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121637355|ref|YP_977578.1| - 0.0051 15.5 0.0 0.012 14.3 0.0 1.5 2 0 0 2 2 2 1 Condensation domain Abhydrolase_3 PF07859.13 gi|121637356|ref|YP_977579.1| - 4e-19 69.3 1.4 7.5e-19 68.4 1.4 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|121637356|ref|YP_977579.1| - 3.1e-14 52.7 0.1 1.9e-13 50.1 0.1 1.9 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 gi|121637356|ref|YP_977579.1| - 1.5e-12 47.5 0.9 9.2e-12 44.9 0.9 2.2 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121637356|ref|YP_977579.1| - 0.005 16.1 0.3 0.024 13.9 0.2 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 LIP PF03583.14 gi|121637356|ref|YP_977579.1| - 0.014 14.8 0.0 0.081 12.2 0.0 2.1 2 1 1 3 3 3 0 Secretory lipase DLH PF01738.18 gi|121637356|ref|YP_977579.1| - 0.064 12.8 0.1 0.12 11.9 0.1 1.5 1 0 0 1 1 1 0 Dienelactone hydrolase family AMP-binding PF00501.28 gi|121637357|ref|YP_977580.1| - 2.6e-67 227.3 0.0 3.2e-67 227.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121637357|ref|YP_977580.1| - 5e-24 85.1 0.2 1.9e-23 83.2 0.2 2.1 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.6 gi|121637357|ref|YP_977580.1| - 0.022 15.0 0.0 0.046 14.0 0.0 1.5 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain Acyltransferase PF01553.21 gi|121637358|ref|YP_977581.1| - 6e-19 68.0 0.0 8.5e-19 67.5 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase DAGAT PF03982.13 gi|121637358|ref|YP_977581.1| - 3.8e-10 39.2 0.0 4.9e-10 38.8 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol acyltransferase HTH_30 PF13556.6 gi|121637359|ref|YP_977582.1| - 5.1e-17 61.4 0.5 1.4e-16 60.0 0.5 1.8 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 gi|121637359|ref|YP_977582.1| - 2.9e-07 30.7 0.9 2.9e-07 30.7 0.9 2.3 2 1 0 2 2 2 1 GGDEF-like domain PE-PPE PF08237.11 gi|121637360|ref|YP_977583.1| - 8.8e-82 274.0 0.4 2e-81 272.8 0.4 1.6 1 0 0 1 1 1 1 PE-PPE domain PE PF00934.20 gi|121637360|ref|YP_977583.1| - 3.2e-34 117.1 18.9 3.2e-34 117.1 18.9 2.3 3 0 0 3 3 3 1 PE family Cutinase PF01083.22 gi|121637360|ref|YP_977583.1| - 0.0005 20.1 0.5 0.043 13.8 0.0 2.4 2 0 0 2 2 2 1 Cutinase Abhydrolase_6 PF12697.7 gi|121637360|ref|YP_977583.1| - 0.018 15.6 4.3 0.018 15.6 4.3 2.6 1 1 1 2 2 2 0 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|121637360|ref|YP_977583.1| - 0.019 14.8 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 gi|121637360|ref|YP_977583.1| - 0.2 11.3 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF2235 PF09994.9 gi|121637360|ref|YP_977583.1| - 0.21 10.9 0.0 0.32 10.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized alpha/beta hydrolase domain (DUF2235) DUF3556 PF12077.8 gi|121637361|ref|YP_977584.1| - 4.5e-267 887.1 6.0 5.2e-267 886.9 6.0 1.0 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) Nipped-B_C PF12830.7 gi|121637361|ref|YP_977584.1| - 0.12 12.4 0.1 9.8 6.1 0.1 2.2 2 0 0 2 2 2 0 Sister chromatid cohesion C-terminus NAD_binding_8 PF13450.6 gi|121637362|ref|YP_977585.1| - 1.6e-12 47.5 0.7 1.6e-12 47.5 0.7 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|121637362|ref|YP_977585.1| - 2.2e-07 30.5 1.3 5.6e-07 29.2 1.3 1.7 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase Thi4 PF01946.17 gi|121637362|ref|YP_977585.1| - 4.9e-07 29.2 0.3 7.3e-07 28.7 0.3 1.2 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|121637362|ref|YP_977585.1| - 6.3e-07 29.3 9.6 8.9e-07 28.8 6.1 2.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|121637362|ref|YP_977585.1| - 8.1e-07 28.7 0.3 1.2e-06 28.1 0.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121637362|ref|YP_977585.1| - 7.2e-06 25.5 1.6 1.1e-05 24.9 1.6 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121637362|ref|YP_977585.1| - 3.7e-05 23.1 0.7 7.5e-05 22.1 0.7 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121637362|ref|YP_977585.1| - 0.00021 20.1 1.0 0.00031 19.6 1.0 1.2 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_2 PF00890.24 gi|121637362|ref|YP_977585.1| - 0.00063 18.9 2.1 0.00063 18.9 2.1 1.5 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|121637362|ref|YP_977585.1| - 0.00072 20.1 2.1 0.001 19.6 0.7 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121637362|ref|YP_977585.1| - 0.00075 18.8 0.8 0.0011 18.3 0.8 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|121637362|ref|YP_977585.1| - 0.006 16.6 1.5 0.011 15.7 0.6 1.8 2 0 0 2 2 2 1 FAD-NAD(P)-binding GIDA PF01134.22 gi|121637362|ref|YP_977585.1| - 0.0081 15.3 1.9 0.012 14.7 1.9 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|121637362|ref|YP_977585.1| - 0.014 14.3 0.1 0.019 13.8 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|121637362|ref|YP_977585.1| - 0.17 10.9 0.9 0.28 10.2 0.9 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein YjeF_N PF03853.15 gi|121637362|ref|YP_977585.1| - 0.35 10.7 2.1 0.38 10.6 0.5 1.8 2 0 0 2 2 2 0 YjeF-related protein N-terminus Big_10 PF17964.1 gi|121637363|ref|YP_977586.1| - 1.9e-19 70.4 0.3 2.6e-19 69.9 0.3 1.2 1 0 0 1 1 1 1 Bacterial Ig domain YkuD PF03734.14 gi|121637363|ref|YP_977586.1| - 2.7e-13 50.5 0.0 5.5e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Gp_dh_C PF02800.20 gi|121637366|ref|YP_977589.1| - 4.3e-69 231.1 0.0 6.3e-69 230.6 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 gi|121637366|ref|YP_977589.1| - 9.2e-32 109.4 0.0 1.7e-31 108.5 0.0 1.5 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|121637366|ref|YP_977589.1| - 0.0022 18.6 0.3 0.012 16.3 0.3 2.1 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain PGK PF00162.19 gi|121637367|ref|YP_977590.1| - 9.4e-132 439.5 0.0 1.2e-131 439.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Phage-Gp8 PF09215.10 gi|121637367|ref|YP_977590.1| - 0.15 11.1 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage T4, Gp8 TIM PF00121.18 gi|121637368|ref|YP_977591.1| - 2.7e-86 288.9 0.0 3.1e-86 288.7 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase SnoaL_2 PF12680.7 gi|121637369|ref|YP_977592.1| - 1.4e-12 48.1 0.1 1.9e-12 47.7 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|121637369|ref|YP_977592.1| - 3.7e-07 30.0 0.0 6.9e-07 29.1 0.0 1.5 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase SecG PF03840.14 gi|121637370|ref|YP_977593.1| - 2e-14 53.4 9.2 2.3e-14 53.2 9.2 1.0 1 0 0 1 1 1 1 Preprotein translocase SecG subunit PE PF00934.20 gi|121637371|ref|YP_977594.1| - 1.5e-33 114.9 19.8 2.6e-33 114.2 19.8 1.4 1 0 0 1 1 1 1 PE family SIS PF01380.22 gi|121637371|ref|YP_977594.1| - 0.11 12.3 0.2 0.2 11.5 0.2 1.3 1 0 0 1 1 1 0 SIS domain T7SS_ESX_EspC PF10824.8 gi|121637371|ref|YP_977594.1| - 0.16 12.5 10.8 0.24 11.9 10.8 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Molybdopterin PF00384.22 gi|121637372|ref|YP_977595.1| - 9.6e-56 189.6 0.0 1.2e-55 189.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|121637372|ref|YP_977595.1| - 8.4e-23 80.5 0.0 2.4e-22 79.0 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdopterin_N PF18364.1 gi|121637372|ref|YP_977595.1| - 1.2e-13 50.8 0.6 5.2e-12 45.6 0.3 2.7 2 0 0 2 2 2 1 Molybdopterin oxidoreductase N-terminal domain PS_pyruv_trans PF04230.13 gi|121637372|ref|YP_977595.1| - 0.083 12.8 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase Polyketide_cyc2 PF10604.9 gi|121637373|ref|YP_977596.1| - 0.00012 22.4 3.7 0.00035 20.9 3.7 1.6 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF948 PF06103.11 gi|121637374|ref|YP_977597.1| - 8.5e-06 25.9 2.9 0.0039 17.4 0.8 2.0 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.9 gi|121637374|ref|YP_977597.1| - 1.2e-05 25.5 1.0 2e-05 24.8 0.7 1.5 1 1 1 2 2 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 UPF0184 PF03670.13 gi|121637374|ref|YP_977597.1| - 0.0001 22.6 0.6 0.00023 21.5 0.5 1.7 2 0 0 2 2 1 1 Uncharacterised protein family (UPF0184) Laminin_II PF06009.12 gi|121637374|ref|YP_977597.1| - 0.00054 20.0 0.1 0.00067 19.7 0.1 1.2 1 0 0 1 1 1 1 Laminin Domain II Baculo_PEP_C PF04513.12 gi|121637374|ref|YP_977597.1| - 0.00064 19.8 3.3 0.027 14.5 0.7 1.6 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus CLZ PF16526.5 gi|121637374|ref|YP_977597.1| - 0.0061 16.9 1.8 0.95 9.9 0.5 2.3 1 1 1 2 2 2 2 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FlaC_arch PF05377.11 gi|121637374|ref|YP_977597.1| - 0.0075 16.6 2.5 0.047 14.1 0.4 2.6 1 1 2 3 3 3 1 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 gi|121637374|ref|YP_977597.1| - 0.0076 16.3 0.2 0.014 15.4 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) KfrA_N PF11740.8 gi|121637374|ref|YP_977597.1| - 0.0082 16.8 0.1 0.014 16.0 0.1 1.4 1 0 0 1 1 1 1 Plasmid replication region DNA-binding N-term NPV_P10 PF05531.12 gi|121637374|ref|YP_977597.1| - 0.0097 16.3 0.7 0.2 12.1 0.7 2.2 1 1 0 1 1 1 1 Nucleopolyhedrovirus P10 protein WXG100 PF06013.12 gi|121637374|ref|YP_977597.1| - 0.013 15.7 0.2 0.32 11.3 0.1 2.2 1 1 1 2 2 2 0 Proteins of 100 residues with WXG CENP-F_leu_zip PF10473.9 gi|121637374|ref|YP_977597.1| - 0.015 15.4 0.4 0.019 15.0 0.4 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Mce4_CUP1 PF11887.8 gi|121637374|ref|YP_977597.1| - 0.015 14.7 0.1 0.019 14.4 0.1 1.2 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF16 PF01519.16 gi|121637374|ref|YP_977597.1| - 0.02 15.4 0.4 0.065 13.7 0.4 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 DUF3450 PF11932.8 gi|121637374|ref|YP_977597.1| - 0.02 14.2 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) RPW8 PF05659.11 gi|121637374|ref|YP_977597.1| - 0.026 14.2 0.1 0.042 13.5 0.1 1.4 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Tropomyosin_1 PF12718.7 gi|121637374|ref|YP_977597.1| - 0.03 14.5 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 Tropomyosin like DegS PF05384.11 gi|121637374|ref|YP_977597.1| - 0.032 13.7 0.9 0.16 11.5 0.3 2.0 1 1 1 2 2 2 0 Sensor protein DegS COG5 PF10392.9 gi|121637374|ref|YP_977597.1| - 0.034 14.3 0.7 0.23 11.6 0.5 2.1 1 1 2 3 3 3 0 Golgi transport complex subunit 5 Snapin_Pallidin PF14712.6 gi|121637374|ref|YP_977597.1| - 0.054 13.9 0.2 0.13 12.7 0.1 1.7 1 1 1 2 2 2 0 Snapin/Pallidin Nsp1_C PF05064.13 gi|121637374|ref|YP_977597.1| - 0.059 13.2 0.4 0.11 12.3 0.4 1.4 1 1 0 1 1 1 0 Nsp1-like C-terminal region SlyX PF04102.12 gi|121637374|ref|YP_977597.1| - 0.06 14.0 0.3 0.21 12.2 0.3 2.1 1 1 0 1 1 1 0 SlyX DUF4795 PF16043.5 gi|121637374|ref|YP_977597.1| - 0.062 12.9 0.2 0.087 12.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DASH_Dam1 PF08653.10 gi|121637374|ref|YP_977597.1| - 0.066 13.0 0.5 1.2 9.0 0.2 2.3 1 1 2 3 3 3 0 DASH complex subunit Dam1 TMF_DNA_bd PF12329.8 gi|121637374|ref|YP_977597.1| - 0.072 13.1 0.4 0.26 11.3 0.2 1.9 2 1 0 2 2 1 0 TATA element modulatory factor 1 DNA binding MCPsignal PF00015.21 gi|121637374|ref|YP_977597.1| - 0.073 12.9 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain APG17 PF04108.12 gi|121637374|ref|YP_977597.1| - 0.075 12.1 0.1 0.081 12.0 0.1 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 DivIVA PF05103.13 gi|121637374|ref|YP_977597.1| - 0.11 12.6 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 DivIVA protein DUF812 PF05667.11 gi|121637374|ref|YP_977597.1| - 0.11 11.4 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF5082 PF16888.5 gi|121637374|ref|YP_977597.1| - 0.11 12.7 0.1 0.24 11.7 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) CHDCT2 PF08074.11 gi|121637374|ref|YP_977597.1| - 0.14 12.4 0.8 0.75 10.0 0.2 1.9 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain LXG PF04740.12 gi|121637374|ref|YP_977597.1| - 0.14 11.9 0.2 0.29 10.8 0.2 1.4 1 1 0 1 1 1 0 LXG domain of WXG superfamily Spc7 PF08317.11 gi|121637374|ref|YP_977597.1| - 0.19 10.6 0.3 0.22 10.3 0.3 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein PspB PF06667.12 gi|121637374|ref|YP_977597.1| - 0.6 10.2 2.3 62 3.7 0.0 2.9 1 1 2 3 3 3 0 Phage shock protein B Glucosamine_iso PF01182.20 gi|121637375|ref|YP_977598.1| - 5.8e-75 252.0 0.0 6.6e-75 251.8 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OpcA_G6PD_assem PF10128.9 gi|121637376|ref|YP_977599.1| - 6.1e-76 255.3 0.4 7.3e-76 255.0 0.4 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase subunit G6PD_C PF02781.16 gi|121637377|ref|YP_977600.1| - 4.4e-109 364.2 0.0 5.3e-109 363.9 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 gi|121637377|ref|YP_977600.1| - 5.1e-63 212.9 0.0 7.3e-63 212.4 0.0 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain TAL_FSA PF00923.19 gi|121637378|ref|YP_977601.1| - 9.4e-86 287.7 0.0 1.1e-85 287.5 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Bromo_MP PF01573.16 gi|121637378|ref|YP_977601.1| - 0.065 12.6 0.0 0.8 9.0 0.0 2.2 2 0 0 2 2 2 0 Bromovirus movement protein Asp1 PF16993.5 gi|121637378|ref|YP_977601.1| - 0.18 11.0 0.0 0.25 10.5 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system protein Asp1 Transketolase_N PF00456.21 gi|121637379|ref|YP_977602.1| - 1.5e-144 481.0 0.0 2e-144 480.7 0.0 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 gi|121637379|ref|YP_977602.1| - 1.6e-44 151.7 0.1 1.1e-43 148.9 0.0 2.5 3 0 0 3 3 3 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|121637379|ref|YP_977602.1| - 1.2e-12 47.8 0.0 3.2e-12 46.4 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain XFP_C PF09363.10 gi|121637379|ref|YP_977602.1| - 0.16 11.4 0.0 0.3 10.5 0.0 1.3 1 0 0 1 1 1 0 XFP C-terminal domain PE PF00934.20 gi|121637380|ref|YP_977603.1| - 1.4e-32 111.8 15.2 1.4e-32 111.8 15.2 1.7 2 0 0 2 2 2 1 PE family UbiA PF01040.18 gi|121637381|ref|YP_977604.1| - 2.8e-58 197.2 31.6 4.4e-58 196.5 31.6 1.3 1 0 0 1 1 1 1 UbiA prenyltransferase family PE PF00934.20 gi|121637382|ref|YP_977605.1| - 3.6e-33 113.8 15.2 6.1e-33 113.0 15.2 1.4 1 0 0 1 1 1 1 PE family GGDEF_2 PF17853.1 gi|121637383|ref|YP_977606.1| - 8.8e-15 55.0 1.7 2.1e-14 53.8 0.4 2.2 2 1 0 2 2 2 1 GGDEF-like domain HTH_30 PF13556.6 gi|121637383|ref|YP_977606.1| - 3.1e-11 42.9 6.1 3.3e-11 42.8 3.5 2.4 3 0 0 3 3 3 1 PucR C-terminal helix-turn-helix domain ADH_zinc_N PF00107.26 gi|121637384|ref|YP_977607.1| - 1.1e-24 86.9 0.0 1.9e-24 86.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637384|ref|YP_977607.1| - 6e-17 62.9 0.1 1.1e-16 62.0 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121637384|ref|YP_977607.1| - 2e-11 43.7 0.0 5.3e-11 42.4 0.0 1.8 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 gi|121637384|ref|YP_977607.1| - 0.018 15.0 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase YAcAr PF10686.9 gi|121637384|ref|YP_977607.1| - 0.044 13.7 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 YspA, cpYpsA-related SLOG family Cpn10 PF00166.21 gi|121637384|ref|YP_977607.1| - 0.055 13.5 0.1 0.84 9.7 0.1 2.4 2 0 0 2 2 2 0 Chaperonin 10 Kd subunit CCB2_CCB4 PF11152.8 gi|121637385|ref|YP_977608.1| - 0.04 13.2 0.0 0.074 12.4 0.0 1.5 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 COX15-CtaA PF02628.15 gi|121637386|ref|YP_977609.1| - 1.9e-11 43.6 47.0 4.6e-09 35.8 46.5 2.8 1 1 0 1 1 1 1 Cytochrome oxidase assembly protein ABC2_membrane PF01061.24 gi|121637387|ref|YP_977610.1| - 9.5e-12 44.8 16.0 1.4e-11 44.3 16.0 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|121637387|ref|YP_977610.1| - 2.5e-08 33.4 16.5 2.5e-08 33.4 16.5 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|121637388|ref|YP_977611.1| - 9.3e-25 87.7 0.0 1.3e-24 87.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121637388|ref|YP_977611.1| - 2.5e-11 43.9 0.1 7.8e-08 32.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637388|ref|YP_977611.1| - 0.00029 20.3 0.0 0.15 11.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|121637388|ref|YP_977611.1| - 0.0023 17.6 0.0 0.0045 16.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|121637388|ref|YP_977611.1| - 0.0034 17.6 0.1 0.092 13.0 0.1 2.5 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit KdpD PF02702.17 gi|121637388|ref|YP_977611.1| - 0.0041 16.6 0.0 0.008 15.7 0.0 1.4 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_30 PF13604.6 gi|121637388|ref|YP_977611.1| - 0.009 15.7 0.4 0.059 13.1 0.1 2.1 1 1 1 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|121637388|ref|YP_977611.1| - 0.022 15.3 0.0 0.034 14.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|121637388|ref|YP_977611.1| - 0.033 13.9 0.1 0.1 12.4 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain GcnA_N PF18229.1 gi|121637388|ref|YP_977611.1| - 0.037 14.1 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 N-acetyl-beta-D-glucosaminidase N-terminal domain AAA_22 PF13401.6 gi|121637388|ref|YP_977611.1| - 0.056 13.7 0.1 0.44 10.8 0.1 2.2 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|121637388|ref|YP_977611.1| - 0.062 12.9 0.1 0.27 10.8 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 gi|121637388|ref|YP_977611.1| - 0.075 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|121637388|ref|YP_977611.1| - 0.089 12.5 0.1 1.1 8.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|121637388|ref|YP_977611.1| - 0.1 12.3 0.1 11 5.7 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_15 PF13175.6 gi|121637388|ref|YP_977611.1| - 0.35 10.5 0.0 1.2 8.8 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain RCR PF12273.8 gi|121637389|ref|YP_977612.1| - 0.096 13.3 1.0 0.26 11.9 0.0 2.3 2 0 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red HTH_24 PF13412.6 gi|121637390|ref|YP_977613.1| - 5.7e-09 35.4 0.1 1.4e-08 34.1 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|121637390|ref|YP_977613.1| - 3.4e-08 33.4 2.1 1.3e-07 31.6 0.2 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121637390|ref|YP_977613.1| - 8.7e-07 28.7 0.1 2.5e-06 27.3 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|121637390|ref|YP_977613.1| - 9.6e-07 28.7 0.1 2.1e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|121637390|ref|YP_977613.1| - 4.2e-06 26.5 2.9 0.00031 20.6 0.4 2.9 2 1 0 2 2 2 1 MarR family HTH_AsnC-type PF13404.6 gi|121637390|ref|YP_977613.1| - 6.2e-05 22.7 1.1 0.00026 20.7 1.1 2.1 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|121637390|ref|YP_977613.1| - 0.00093 19.1 0.1 0.0049 16.8 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_DeoR PF08220.12 gi|121637390|ref|YP_977613.1| - 0.0024 17.6 0.0 0.0062 16.3 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_34 PF13601.6 gi|121637390|ref|YP_977613.1| - 0.0027 17.8 0.0 0.03 14.5 0.0 2.3 2 1 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|121637390|ref|YP_977613.1| - 0.0065 16.3 0.1 0.055 13.3 0.2 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain PadR PF03551.14 gi|121637390|ref|YP_977613.1| - 0.013 15.5 0.0 0.035 14.1 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|121637390|ref|YP_977613.1| - 0.026 14.4 0.0 0.069 13.0 0.0 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB MRP PF09387.10 gi|121637390|ref|YP_977613.1| - 0.029 14.4 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP HTH_Crp_2 PF13545.6 gi|121637390|ref|YP_977613.1| - 0.051 13.6 0.2 11 6.1 0.0 3.2 4 0 0 4 4 4 0 Crp-like helix-turn-helix domain HTH_9 PF08221.11 gi|121637390|ref|YP_977613.1| - 0.12 12.5 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_28 PF13518.6 gi|121637390|ref|YP_977613.1| - 1.3 9.2 7.6 0.2 11.8 0.5 3.2 4 1 1 5 5 5 0 Helix-turn-helix domain UPF0051 PF01458.17 gi|121637391|ref|YP_977614.1| - 7.4e-73 244.8 0.1 4.5e-70 235.7 0.1 2.3 2 0 0 2 2 2 2 Uncharacterized protein family (UPF0051) Hom_end_hint PF05203.16 gi|121637391|ref|YP_977614.1| - 8.7e-06 25.8 0.0 2.5e-05 24.3 0.0 1.8 1 0 0 1 1 1 1 Hom_end-associated Hint LAGLIDADG_3 PF14528.6 gi|121637391|ref|YP_977614.1| - 4.2e-05 23.8 0.0 0.052 13.9 0.0 2.7 2 0 0 2 2 2 2 LAGLIDADG-like domain Intein_splicing PF14890.6 gi|121637391|ref|YP_977614.1| - 0.0005 20.0 0.0 0.0071 16.3 0.0 2.5 2 1 1 3 3 3 1 Intein splicing domain Hint_2 PF13403.6 gi|121637391|ref|YP_977614.1| - 0.00073 19.8 0.0 0.0017 18.7 0.0 1.6 1 0 0 1 1 1 1 Hint domain Hint PF01079.20 gi|121637391|ref|YP_977614.1| - 0.023 14.2 0.0 0.043 13.3 0.0 1.5 1 0 0 1 1 1 0 Hint module UPF0051 PF01458.17 gi|121637392|ref|YP_977615.1| - 3.6e-68 229.5 0.0 4.7e-68 229.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Hydrolase_4 PF12146.8 gi|121637392|ref|YP_977615.1| - 0.082 12.2 0.4 0.15 11.3 0.4 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 ABC_tran PF00005.27 gi|121637393|ref|YP_977616.1| - 7.2e-21 75.1 0.0 9.2e-21 74.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121637393|ref|YP_977616.1| - 2.4e-05 24.3 0.1 0.0054 16.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637393|ref|YP_977616.1| - 2.7e-05 23.7 0.0 0.017 14.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121637393|ref|YP_977616.1| - 0.00058 19.5 0.2 0.0011 18.6 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|121637393|ref|YP_977616.1| - 0.007 16.8 0.1 0.058 13.8 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|121637393|ref|YP_977616.1| - 0.011 15.3 0.2 0.037 13.6 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|121637393|ref|YP_977616.1| - 0.036 12.7 0.0 0.24 10.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|121637393|ref|YP_977616.1| - 0.062 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 gi|121637393|ref|YP_977616.1| - 0.064 13.7 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121637393|ref|YP_977616.1| - 0.15 11.8 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_27 PF13514.6 gi|121637393|ref|YP_977616.1| - 0.16 11.5 0.1 0.46 10.0 0.1 1.7 2 0 0 2 2 2 0 AAA domain Aminotran_5 PF00266.19 gi|121637394|ref|YP_977617.1| - 3.4e-140 467.2 0.0 3.9e-140 467.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V SelA PF03841.13 gi|121637394|ref|YP_977617.1| - 0.0015 17.6 0.0 0.0023 17.0 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_1_2 PF00155.21 gi|121637394|ref|YP_977617.1| - 0.14 11.3 0.0 0.23 10.6 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|121637394|ref|YP_977617.1| - 0.16 10.5 0.0 0.25 9.8 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme NifU_N PF01592.16 gi|121637395|ref|YP_977618.1| - 1.5e-36 125.4 0.0 2.1e-36 124.9 0.0 1.2 1 0 0 1 1 1 1 NifU-like N terminal domain DUF3261 PF11659.8 gi|121637395|ref|YP_977618.1| - 0.018 14.9 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3261) FeS_assembly_P PF01883.19 gi|121637396|ref|YP_977619.1| - 4e-19 68.5 0.5 6.2e-19 67.9 0.5 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Acyl-CoA_dh_C PF12806.7 gi|121637397|ref|YP_977620.1| - 3e-30 104.9 0.1 8.8e-30 103.4 0.0 1.9 2 0 0 2 2 2 1 Acetyl-CoA dehydrogenase C-terminal like Acyl-CoA_dh_1 PF00441.24 gi|121637397|ref|YP_977620.1| - 4.3e-18 66.0 1.0 3.9e-17 62.8 1.0 2.3 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121637397|ref|YP_977620.1| - 6.3e-18 64.8 0.0 1.4e-17 63.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain AcylCoA_DH_N PF12418.8 gi|121637397|ref|YP_977620.1| - 2.6e-09 36.9 0.0 6.2e-09 35.8 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase N terminal Acyl-CoA_dh_N PF02771.16 gi|121637397|ref|YP_977620.1| - 0.00017 22.2 0.0 0.00046 20.8 0.0 1.8 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121637397|ref|YP_977620.1| - 0.012 15.9 0.0 0.044 14.1 0.0 2.1 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain PE PF00934.20 gi|121637398|ref|YP_977621.1| - 1.4e-32 111.9 23.3 2e-32 111.3 23.3 1.3 1 0 0 1 1 1 1 PE family E1-E2_ATPase PF00122.20 gi|121637399|ref|YP_977622.1| - 3.9e-47 160.1 3.0 3.9e-47 160.1 3.0 2.3 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121637399|ref|YP_977622.1| - 9.3e-36 124.1 1.5 1.7e-35 123.2 1.5 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121637399|ref|YP_977622.1| - 0.0009 19.0 0.1 0.0013 18.5 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1257 PF06868.11 gi|121637399|ref|YP_977622.1| - 0.11 12.8 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1257) Cadherin_4 PF17803.1 gi|121637399|ref|YP_977622.1| - 0.64 10.7 3.0 7.4 7.3 0.4 2.7 2 0 0 2 2 2 0 Bacterial cadherin-like domain Thioredoxin PF00085.20 gi|121637400|ref|YP_977623.1| - 8.5e-18 64.2 0.0 1e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|121637400|ref|YP_977623.1| - 0.00076 19.8 0.0 0.0014 19.0 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|121637400|ref|YP_977623.1| - 0.00089 19.7 0.1 0.016 15.6 0.1 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|121637401|ref|YP_977624.1| - 1.4e-25 89.3 0.0 1.7e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|121637401|ref|YP_977624.1| - 1.7e-06 28.4 0.0 8.7e-06 26.2 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|121637401|ref|YP_977624.1| - 4.3e-06 27.0 0.0 7e-05 23.1 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|121637401|ref|YP_977624.1| - 0.00018 21.3 0.0 0.00023 21.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|121637401|ref|YP_977624.1| - 0.007 16.5 0.0 0.012 15.8 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 gi|121637401|ref|YP_977624.1| - 0.013 14.9 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Redoxin PF08534.10 gi|121637401|ref|YP_977624.1| - 0.03 14.0 0.0 0.17 11.6 0.0 1.8 1 1 1 2 2 2 0 Redoxin AhpC-TSA PF00578.21 gi|121637401|ref|YP_977624.1| - 0.072 13.0 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family Glutaredoxin PF00462.24 gi|121637401|ref|YP_977624.1| - 0.15 12.3 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin ECH_1 PF00378.20 gi|121637402|ref|YP_977625.1| - 6.8e-48 163.2 0.0 9.2e-48 162.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121637402|ref|YP_977625.1| - 4.6e-24 85.5 0.1 5.5e-24 85.3 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ABC_tran PF00005.27 gi|121637403|ref|YP_977626.1| - 2.9e-46 157.4 0.1 5.8e-23 81.9 0.0 2.9 3 0 0 3 3 2 2 ABC transporter AAA_21 PF13304.6 gi|121637403|ref|YP_977626.1| - 7e-24 85.2 4.9 9.9e-07 28.9 0.0 4.2 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637403|ref|YP_977626.1| - 5.2e-09 35.9 0.0 0.049 13.1 0.0 4.2 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain ABC_tran_Xtn PF12848.7 gi|121637403|ref|YP_977626.1| - 2.3e-08 34.0 3.5 4.4e-08 33.0 3.5 1.5 1 0 0 1 1 1 1 ABC transporter SbcCD_C PF13558.6 gi|121637403|ref|YP_977626.1| - 5e-08 33.1 0.3 0.0093 16.2 0.1 3.4 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 gi|121637403|ref|YP_977626.1| - 6e-06 26.8 0.5 0.36 11.4 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_29 PF13555.6 gi|121637403|ref|YP_977626.1| - 2.8e-05 23.8 0.3 0.081 12.7 0.0 3.0 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121637403|ref|YP_977626.1| - 2.9e-05 24.6 2.0 0.042 14.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain Arf PF00025.21 gi|121637403|ref|YP_977626.1| - 8.6e-05 22.1 0.1 0.0038 16.7 0.0 2.3 2 0 0 2 2 2 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 gi|121637403|ref|YP_977626.1| - 0.00015 21.8 0.0 0.65 10.1 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase SRP54 PF00448.22 gi|121637403|ref|YP_977626.1| - 0.00019 21.1 0.4 0.67 9.6 0.0 2.6 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain AAA_13 PF13166.6 gi|121637403|ref|YP_977626.1| - 0.0003 19.6 3.5 0.052 12.2 0.0 3.4 4 0 0 4 4 4 1 AAA domain AAA_16 PF13191.6 gi|121637403|ref|YP_977626.1| - 0.00033 21.1 9.3 0.13 12.6 0.4 3.5 3 1 0 3 3 3 2 AAA ATPase domain Herpes_UL36 PF03586.13 gi|121637403|ref|YP_977626.1| - 0.00042 19.7 1.4 0.00066 19.1 1.4 1.2 1 0 0 1 1 1 1 Herpesvirus UL36 tegument protein AAA_28 PF13521.6 gi|121637403|ref|YP_977626.1| - 0.0005 20.3 3.5 0.1 12.8 0.0 3.2 3 0 0 3 3 3 1 AAA domain DLIC PF05783.11 gi|121637403|ref|YP_977626.1| - 0.00072 18.5 0.0 0.0064 15.4 0.0 2.1 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) AAA_33 PF13671.6 gi|121637403|ref|YP_977626.1| - 0.00073 19.7 4.5 0.17 12.0 0.1 4.1 3 1 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|121637403|ref|YP_977626.1| - 0.00093 19.5 3.0 2.2 8.5 0.2 3.7 2 2 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 gi|121637403|ref|YP_977626.1| - 0.002 18.1 0.2 0.76 9.7 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase DUF3584 PF12128.8 gi|121637403|ref|YP_977626.1| - 0.0023 15.5 10.0 0.015 12.8 0.3 2.8 3 0 0 3 3 3 2 Protein of unknown function (DUF3584) AAA_24 PF13479.6 gi|121637403|ref|YP_977626.1| - 0.0051 16.6 0.1 3 7.5 0.0 2.7 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|121637403|ref|YP_977626.1| - 0.0061 15.9 0.3 1.1 8.5 0.1 2.7 2 0 0 2 2 2 1 Zeta toxin TsaE PF02367.17 gi|121637403|ref|YP_977626.1| - 0.0065 16.5 0.1 3.8 7.5 0.0 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|121637403|ref|YP_977626.1| - 0.0094 15.9 2.3 0.94 9.4 0.2 3.0 3 0 0 3 3 3 1 NACHT domain AAA_15 PF13175.6 gi|121637403|ref|YP_977626.1| - 0.01 15.5 0.0 2.9 7.5 0.0 2.6 3 0 0 3 3 2 0 AAA ATPase domain cobW PF02492.19 gi|121637403|ref|YP_977626.1| - 0.015 14.9 1.0 1 8.9 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|121637403|ref|YP_977626.1| - 0.028 14.2 0.2 5.5 6.7 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MobB PF03205.14 gi|121637403|ref|YP_977626.1| - 0.037 13.9 0.0 10 6.0 0.0 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Thymidylate_kin PF02223.17 gi|121637403|ref|YP_977626.1| - 0.09 12.4 0.2 6 6.5 0.0 2.4 2 0 0 2 2 2 0 Thymidylate kinase AAA PF00004.29 gi|121637403|ref|YP_977626.1| - 0.12 12.9 4.3 3 8.3 0.1 3.2 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 gi|121637403|ref|YP_977626.1| - 0.12 12.5 0.2 7 6.9 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Pox_F12L PF03337.13 gi|121637403|ref|YP_977626.1| - 0.28 9.3 0.2 0.38 8.9 0.2 1.1 1 0 0 1 1 1 0 Poxvirus F12L protein AAA_30 PF13604.6 gi|121637403|ref|YP_977626.1| - 0.37 10.5 12.5 0.76 9.5 0.3 3.4 3 1 0 3 3 3 0 AAA domain AAA_27 PF13514.6 gi|121637403|ref|YP_977626.1| - 0.66 9.5 5.6 5.4 6.5 0.0 3.4 4 0 0 4 4 3 0 AAA domain AAA_25 PF13481.6 gi|121637403|ref|YP_977626.1| - 6.1 6.4 8.1 5.1 6.6 0.2 3.6 3 1 0 3 3 3 0 AAA domain HTH_24 PF13412.6 gi|121637404|ref|YP_977627.1| - 0.053 13.1 0.1 0.068 12.7 0.1 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 gi|121637404|ref|YP_977627.1| - 0.12 12.5 1.7 0.22 11.5 1.7 1.6 1 1 0 1 1 1 0 Winged helix-turn helix TetR_N PF00440.23 gi|121637405|ref|YP_977628.1| - 2.1e-17 62.7 0.2 4.2e-17 61.7 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Hemerythrin PF01814.23 gi|121637405|ref|YP_977628.1| - 0.038 14.6 4.7 0.021 15.5 2.4 1.7 2 0 0 2 2 2 0 Hemerythrin HHE cation binding domain Aconitase PF00330.20 gi|121637406|ref|YP_977629.1| - 5.5e-179 596.0 0.0 7.9e-179 595.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|121637406|ref|YP_977629.1| - 3e-41 140.8 0.0 4.8e-41 140.1 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain DUF4336 PF14234.6 gi|121637407|ref|YP_977630.1| - 0.095 11.9 0.0 0.095 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4336) NLPC_P60 PF00877.19 gi|121637408|ref|YP_977631.1| - 7.8e-31 106.2 0.0 1.5e-30 105.3 0.0 1.5 1 0 0 1 1 1 1 NlpC/P60 family GAS PF13851.6 gi|121637408|ref|YP_977631.1| - 0.23 10.8 12.6 0.2 11.0 0.4 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding SCO1-SenC PF02630.14 gi|121637408|ref|YP_977631.1| - 0.33 10.9 1.4 0.82 9.6 0.8 1.9 1 1 1 2 2 2 0 SCO1/SenC Spc7 PF08317.11 gi|121637408|ref|YP_977631.1| - 0.36 9.7 14.3 1 8.2 1.6 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein Cep57_CLD_2 PF14197.6 gi|121637408|ref|YP_977631.1| - 0.41 10.8 6.6 0.26 11.4 2.1 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 HIP1_clath_bdg PF16515.5 gi|121637408|ref|YP_977631.1| - 9.5 6.9 15.6 12 6.6 6.9 2.4 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 NLPC_P60 PF00877.19 gi|121637409|ref|YP_977632.1| - 4.4e-31 107.0 0.0 6.2e-31 106.6 0.0 1.2 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 gi|121637409|ref|YP_977632.1| - 0.0022 17.7 0.0 0.71 9.5 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1175) NrfD_2 PF14589.6 gi|121637409|ref|YP_977632.1| - 0.12 12.3 0.3 0.15 12.0 0.3 1.2 1 0 0 1 1 1 0 Polysulfide reductase AAA_3 PF07726.11 gi|121637410|ref|YP_977633.1| - 1.2e-60 203.1 0.0 2.1e-60 202.3 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|121637410|ref|YP_977633.1| - 1.4e-17 63.3 0.1 3.5e-17 62.0 0.1 1.7 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|121637410|ref|YP_977633.1| - 7.2e-16 58.4 0.0 1.5e-15 57.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|121637410|ref|YP_977633.1| - 0.00027 20.7 0.1 0.0025 17.5 0.0 2.3 3 0 0 3 3 3 1 Sigma-54 interaction domain MCM PF00493.23 gi|121637410|ref|YP_977633.1| - 0.0082 15.3 0.0 0.031 13.4 0.0 1.9 2 1 0 2 2 2 1 MCM P-loop domain AAA PF00004.29 gi|121637410|ref|YP_977633.1| - 0.015 15.7 0.0 0.052 14.0 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121637410|ref|YP_977633.1| - 0.052 13.3 0.2 2.8 7.7 0.2 2.9 2 1 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|121637410|ref|YP_977633.1| - 0.14 11.5 0.2 3.3 7.0 0.1 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI DUF58 PF01882.18 gi|121637411|ref|YP_977634.1| - 2.1e-18 66.4 0.0 5.3e-18 65.1 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|121637411|ref|YP_977634.1| - 5.9e-05 23.7 0.0 0.00027 21.5 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|121637412|ref|YP_977635.1| - 8.6e-21 74.6 0.1 1.9e-20 73.5 0.1 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|121637412|ref|YP_977635.1| - 9.6e-18 65.0 0.0 1.4e-17 64.5 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain BatA PF07584.11 gi|121637412|ref|YP_977635.1| - 9.1e-06 26.0 8.7 9.1e-06 26.0 8.7 2.4 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal Ssl1 PF04056.14 gi|121637412|ref|YP_977635.1| - 0.0068 16.2 0.0 0.014 15.2 0.0 1.5 2 0 0 2 2 2 1 Ssl1-like DUF588 PF04535.12 gi|121637412|ref|YP_977635.1| - 0.046 13.5 2.7 1.3 8.8 0.2 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF588) SPOR PF05036.13 gi|121637412|ref|YP_977635.1| - 0.23 11.8 1.7 6.9 7.1 0.1 2.7 3 0 0 3 3 3 0 Sporulation related domain DUF4131 PF13567.6 gi|121637412|ref|YP_977635.1| - 6.5 6.4 10.0 0.23 11.1 1.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) MTES_1575 PF18741.1 gi|121637413|ref|YP_977636.1| - 0.00011 22.3 0.7 0.00019 21.5 0.7 1.4 1 0 0 1 1 1 1 REase_MTES_1575 AbiEi_1 PF09407.10 gi|121637413|ref|YP_977636.1| - 0.11 12.9 0.2 0.27 11.5 0.2 1.7 1 1 0 1 1 1 0 AbiEi antitoxin C-terminal domain adh_short_C2 PF13561.6 gi|121637414|ref|YP_977637.1| - 8.1e-57 192.5 5.7 1.7e-56 191.4 5.7 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637414|ref|YP_977637.1| - 6.5e-49 166.0 4.1 1.3e-48 165.1 4.1 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637414|ref|YP_977637.1| - 5.9e-19 68.7 2.8 1.9e-15 57.3 0.1 2.2 2 0 0 2 2 2 2 KR domain Epimerase PF01370.21 gi|121637414|ref|YP_977637.1| - 4.7e-09 36.1 0.7 1.7e-08 34.3 0.7 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|121637414|ref|YP_977637.1| - 0.00033 19.9 0.2 0.00062 19.0 0.2 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|121637414|ref|YP_977637.1| - 0.00059 19.8 1.6 0.00084 19.3 1.6 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DUF917 PF06032.12 gi|121637414|ref|YP_977637.1| - 0.0077 15.1 0.3 0.01 14.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF917) Amdase PF17645.1 gi|121637414|ref|YP_977637.1| - 0.017 14.7 0.2 0.076 12.6 0.0 1.9 2 0 0 2 2 2 0 Arylmalonate decarboxylase adh_short_C2 PF13561.6 gi|121637415|ref|YP_977638.1| - 4.8e-56 189.9 0.0 6.4e-56 189.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637415|ref|YP_977638.1| - 1.3e-11 44.3 0.0 1.9e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Ferrochelatase PF00762.19 gi|121637416|ref|YP_977639.1| - 5.3e-93 311.6 0.0 6.6e-93 311.3 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase CbiX PF01903.17 gi|121637416|ref|YP_977639.1| - 0.017 15.4 0.0 5.1 7.5 0.0 2.5 2 0 0 2 2 2 0 CbiX NfeD PF01957.18 gi|121637418|ref|YP_977641.1| - 1.4e-19 70.2 2.3 2.9e-19 69.2 2.3 1.5 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding Orthoreo_P10 PF07204.11 gi|121637418|ref|YP_977641.1| - 0.11 12.5 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Band_7 PF01145.25 gi|121637419|ref|YP_977642.1| - 4.3e-30 105.0 3.6 4.3e-30 105.0 3.6 1.8 1 1 1 2 2 2 1 SPFH domain / Band 7 family Asp_Glu_race PF01177.22 gi|121637419|ref|YP_977642.1| - 0.017 15.0 3.8 0.089 12.6 0.2 2.7 2 1 1 3 3 3 0 Asp/Glu/Hydantoin racemase Band_7_1 PF13421.6 gi|121637419|ref|YP_977642.1| - 0.075 12.7 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 SPFH domain-Band 7 family Ntox1 PF15500.6 gi|121637419|ref|YP_977642.1| - 0.1 12.9 3.6 0.085 13.2 1.4 2.0 1 1 1 2 2 2 0 Putative RNase-like toxin, toxin_1 OppC_N PF12911.7 gi|121637419|ref|YP_977642.1| - 0.48 10.4 4.0 1 9.4 4.0 1.5 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Caudo_TAP PF02413.17 gi|121637419|ref|YP_977642.1| - 9.8 6.3 8.4 8.5 6.5 3.7 2.4 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK DoxX_2 PF13564.6 gi|121637420|ref|YP_977643.1| - 5.8e-11 42.4 8.1 7.8e-11 42.0 8.1 1.1 1 0 0 1 1 1 1 DoxX-like family Virul_fac_BrkB PF03631.15 gi|121637420|ref|YP_977643.1| - 0.075 12.6 3.7 0.08 12.5 3.7 1.1 1 0 0 1 1 1 0 Virulence factor BrkB MM_CoA_mutase PF01642.22 gi|121637421|ref|YP_977644.1| - 4.3e-05 22.3 0.1 4.8e-05 22.1 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase DUF4956 PF16316.5 gi|121637422|ref|YP_977645.1| - 3.1 7.4 8.1 0.78 9.4 0.0 2.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4956) SNARE_assoc PF09335.11 gi|121637423|ref|YP_977646.1| - 4.5e-23 82.0 8.7 4.5e-23 82.0 8.7 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein ECF_trnsprt PF12822.7 gi|121637423|ref|YP_977646.1| - 0.004 17.3 8.0 0.004 17.3 8.0 2.4 1 1 2 3 3 3 1 ECF transporter, substrate-specific component Arg_repressor_C PF02863.18 gi|121637423|ref|YP_977646.1| - 0.15 11.9 0.8 0.39 10.6 0.8 1.6 1 0 0 1 1 1 0 Arginine repressor, C-terminal domain MM_CoA_mutase PF01642.22 gi|121637424|ref|YP_977647.1| - 1.1e-124 416.9 0.0 1.4e-124 416.5 0.0 1.1 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase MM_CoA_mutase PF01642.22 gi|121637425|ref|YP_977648.1| - 5.8e-229 760.9 0.2 7.1e-229 760.6 0.2 1.1 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase B12-binding PF02310.19 gi|121637425|ref|YP_977648.1| - 6.3e-15 55.3 0.8 1.4e-14 54.1 0.8 1.7 1 0 0 1 1 1 1 B12 binding domain PemK_toxin PF02452.17 gi|121637427|ref|YP_977650.1| - 1.3e-14 54.5 0.0 1.5e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system MeaB PF03308.16 gi|121637428|ref|YP_977651.1| - 6.9e-124 412.1 1.1 8.2e-124 411.9 1.1 1.0 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|121637428|ref|YP_977651.1| - 2.6e-07 30.4 0.9 1.6e-06 27.9 0.9 2.1 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|121637428|ref|YP_977651.1| - 6.7e-05 23.0 0.0 0.00013 22.1 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ATP_bind_1 PF03029.17 gi|121637428|ref|YP_977651.1| - 0.00013 21.8 0.0 0.0017 18.2 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|121637428|ref|YP_977651.1| - 0.00013 21.7 0.3 0.00027 20.7 0.2 1.6 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|121637428|ref|YP_977651.1| - 0.001 18.8 0.0 0.0018 18.0 0.0 1.5 1 0 0 1 1 1 1 Thymidylate kinase IstB_IS21 PF01695.17 gi|121637428|ref|YP_977651.1| - 0.001 18.8 0.0 0.0032 17.2 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|121637428|ref|YP_977651.1| - 0.0016 19.0 0.2 0.0039 17.7 0.2 1.7 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|121637428|ref|YP_977651.1| - 0.0024 17.5 0.1 0.034 13.8 0.1 2.5 1 1 0 2 2 2 1 SRP54-type protein, GTPase domain ArsA_ATPase PF02374.15 gi|121637428|ref|YP_977651.1| - 0.0027 16.9 0.1 0.0052 16.0 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase Hpr_kinase_C PF07475.12 gi|121637428|ref|YP_977651.1| - 0.003 17.1 1.2 0.72 9.4 0.1 2.3 2 0 0 2 2 2 2 HPr Serine kinase C-terminal domain AAA_16 PF13191.6 gi|121637428|ref|YP_977651.1| - 0.004 17.6 0.1 0.0096 16.3 0.1 1.7 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|121637428|ref|YP_977651.1| - 0.0056 16.8 0.7 0.04 14.0 0.7 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase Glyco_transf_4 PF13439.6 gi|121637428|ref|YP_977651.1| - 0.0064 16.5 0.4 2.1 8.3 0.0 2.4 2 0 0 2 2 2 1 Glycosyltransferase Family 4 NTPase_1 PF03266.15 gi|121637428|ref|YP_977651.1| - 0.0095 15.9 0.1 0.018 15.0 0.1 1.4 1 0 0 1 1 1 1 NTPase Fer4_NifH PF00142.18 gi|121637428|ref|YP_977651.1| - 0.015 14.8 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_22 PF13401.6 gi|121637428|ref|YP_977651.1| - 0.019 15.2 0.0 0.045 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|121637428|ref|YP_977651.1| - 0.021 14.2 0.6 0.25 10.6 0.6 2.1 1 1 0 1 1 1 0 FtsK/SpoIIIE family AAA_24 PF13479.6 gi|121637428|ref|YP_977651.1| - 0.034 13.9 0.0 0.066 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain ParA PF10609.9 gi|121637428|ref|YP_977651.1| - 0.04 13.3 0.2 0.084 12.3 0.2 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|121637428|ref|YP_977651.1| - 0.044 13.7 0.0 0.078 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 gi|121637428|ref|YP_977651.1| - 0.056 13.0 0.3 0.38 10.3 0.0 2.1 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|121637428|ref|YP_977651.1| - 0.059 13.3 0.0 8.6 6.2 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase Viral_helicase1 PF01443.18 gi|121637428|ref|YP_977651.1| - 0.11 12.3 0.2 0.19 11.4 0.2 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase KTI12 PF08433.10 gi|121637428|ref|YP_977651.1| - 0.11 11.9 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_29 PF13555.6 gi|121637428|ref|YP_977651.1| - 0.17 11.6 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Beta-lactamase PF00144.24 gi|121637429|ref|YP_977652.1| - 5.7e-58 196.7 4.4 8.4e-58 196.2 4.4 1.1 1 0 0 1 1 1 1 Beta-lactamase Methyltransf_11 PF08241.12 gi|121637430|ref|YP_977653.1| - 3.8e-24 85.2 0.0 1.4e-23 83.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637430|ref|YP_977653.1| - 2e-20 73.3 0.0 1.7e-19 70.3 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637430|ref|YP_977653.1| - 1.7e-19 70.1 0.0 2.8e-19 69.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637430|ref|YP_977653.1| - 1.5e-15 57.7 0.0 2.1e-15 57.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637430|ref|YP_977653.1| - 6.6e-14 52.1 0.0 7.8e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121637430|ref|YP_977653.1| - 1.2e-07 31.3 0.0 6.5e-07 28.9 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|121637430|ref|YP_977653.1| - 0.00014 21.5 0.0 0.00022 20.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_33 PF10017.9 gi|121637430|ref|YP_977653.1| - 0.0063 15.7 0.0 0.0078 15.4 0.0 1.1 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent Pox_MCEL PF03291.16 gi|121637430|ref|YP_977653.1| - 0.01 15.0 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 0 mRNA capping enzyme Methyltransf_4 PF02390.17 gi|121637430|ref|YP_977653.1| - 0.01 15.3 0.0 0.043 13.3 0.0 1.8 2 0 0 2 2 2 0 Putative methyltransferase TPMT PF05724.11 gi|121637430|ref|YP_977653.1| - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_8 PF05148.15 gi|121637430|ref|YP_977653.1| - 0.06 13.2 0.0 0.38 10.6 0.0 2.1 2 0 0 2 2 2 0 Hypothetical methyltransferase CMAS PF02353.20 gi|121637430|ref|YP_977653.1| - 0.069 12.4 0.0 0.2 10.9 0.0 1.7 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_29 PF03141.16 gi|121637430|ref|YP_977653.1| - 0.093 11.3 0.0 0.14 10.6 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase TehB PF03848.14 gi|121637430|ref|YP_977653.1| - 0.095 12.1 0.0 0.37 10.2 0.0 1.8 1 1 0 1 1 1 0 Tellurite resistance protein TehB MetW PF07021.12 gi|121637430|ref|YP_977653.1| - 0.1 12.2 0.0 7.8 6.0 0.0 2.1 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|121637430|ref|YP_977653.1| - 0.17 11.2 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CheR PF01739.18 gi|121637430|ref|YP_977653.1| - 0.23 10.9 0.0 0.72 9.3 0.0 1.8 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Dodecin PF07311.12 gi|121637431|ref|YP_977654.1| - 4.4e-25 87.7 0.0 4.8e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Dodecin Glycos_transf_2 PF00535.26 gi|121637433|ref|YP_977656.1| - 5.9e-39 133.6 0.0 8.1e-39 133.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|121637433|ref|YP_977656.1| - 5.1e-05 22.9 0.0 8.3e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|121637433|ref|YP_977656.1| - 0.00049 20.1 0.0 0.00078 19.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 PhyH PF05721.13 gi|121637434|ref|YP_977657.1| - 9e-33 114.3 0.0 1.1e-32 114.0 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) 2OG-FeII_Oxy_5 PF13759.6 gi|121637434|ref|YP_977657.1| - 0.00042 20.7 0.0 0.0007 20.0 0.0 1.3 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 gi|121637434|ref|YP_977657.1| - 0.038 14.9 0.0 0.066 14.1 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily BNR_2 PF13088.6 gi|121637435|ref|YP_977658.1| - 3.2e-05 23.4 0.2 0.004 16.5 0.1 2.2 2 0 0 2 2 2 2 BNR repeat-like domain Glyco_hydro_43 PF04616.14 gi|121637435|ref|YP_977658.1| - 0.00031 20.2 0.2 0.00069 19.0 0.2 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 DegT_DnrJ_EryC1 PF01041.17 gi|121637436|ref|YP_977659.1| - 4.9e-86 289.3 0.0 5.5e-86 289.1 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|121637436|ref|YP_977659.1| - 2.9e-06 26.7 0.0 6e-06 25.7 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|121637436|ref|YP_977659.1| - 0.0058 15.6 0.0 0.0085 15.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|121637436|ref|YP_977659.1| - 0.022 13.3 0.0 0.035 12.6 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|121637436|ref|YP_977659.1| - 0.066 12.5 0.0 0.11 11.8 0.0 1.4 1 1 0 1 1 1 0 Beta-eliminating lyase Hexapep PF00132.24 gi|121637437|ref|YP_977660.1| - 1.2e-17 62.9 13.7 1.8e-06 27.4 0.4 3.8 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|121637437|ref|YP_977660.1| - 2.7e-07 30.2 5.9 4.1e-06 26.4 0.5 3.6 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase PglD_N PF17836.1 gi|121637437|ref|YP_977660.1| - 0.0049 17.5 0.0 0.12 13.0 0.0 2.3 1 1 1 2 2 2 1 PglD N-terminal domain SfLAP PF11139.8 gi|121637438|ref|YP_977661.1| - 3.8e-64 216.1 29.6 4.3e-64 215.9 29.6 1.0 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein Glycos_transf_2 PF00535.26 gi|121637439|ref|YP_977662.1| - 1e-23 84.0 0.0 1.5e-23 83.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121637439|ref|YP_977662.1| - 1.1e-14 54.9 0.1 2e-14 54.0 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|121637439|ref|YP_977662.1| - 1.9e-06 28.0 0.6 2.8e-06 27.4 0.6 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|121637439|ref|YP_977662.1| - 2.8e-06 27.0 0.0 0.00012 21.7 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|121637439|ref|YP_977662.1| - 0.042 14.4 0.1 0.36 11.4 0.0 2.4 2 0 0 2 2 2 0 Glycosyl transferase family 2 DegT_DnrJ_EryC1 PF01041.17 gi|121637440|ref|YP_977663.1| - 1.4e-05 24.6 0.0 1.5e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family RadC PF04002.15 gi|121637440|ref|YP_977663.1| - 0.13 12.2 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 RadC-like JAB domain Glycos_transf_2 PF00535.26 gi|121637441|ref|YP_977664.1| - 1.4e-23 83.5 0.1 3.6e-23 82.2 0.1 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121637441|ref|YP_977664.1| - 5.9e-07 29.6 0.1 1.1e-06 28.7 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|121637441|ref|YP_977664.1| - 8.4e-06 25.5 0.0 1.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 AMP-binding PF00501.28 gi|121637442|ref|YP_977665.1| - 5.1e-72 242.8 0.0 6.1e-72 242.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme MMPL PF03176.15 gi|121637443|ref|YP_977666.1| - 2.3e-194 644.8 44.9 5.6e-100 334.5 16.7 4.3 3 2 2 5 5 5 2 MMPL family Sterol-sensing PF12349.8 gi|121637443|ref|YP_977666.1| - 0.00019 21.3 3.5 0.00019 21.3 3.5 2.6 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation Prominin PF05478.11 gi|121637443|ref|YP_977666.1| - 0.014 13.4 4.4 0.056 11.4 0.0 3.2 3 1 1 4 4 4 0 Prominin Baculo_PEP_C PF04513.12 gi|121637443|ref|YP_977666.1| - 0.03 14.3 4.7 1.6 8.8 1.9 2.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Patched PF02460.18 gi|121637443|ref|YP_977666.1| - 1.8 6.5 12.5 20 3.1 0.0 2.2 2 0 0 2 2 2 0 Patched family Methyltransf_11 PF08241.12 gi|121637444|ref|YP_977667.1| - 2.3e-24 85.9 0.0 3.9e-24 85.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637444|ref|YP_977667.1| - 3.4e-22 79.0 0.0 6.3e-22 78.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121637444|ref|YP_977667.1| - 3.5e-17 62.6 0.0 5.5e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637444|ref|YP_977667.1| - 2.1e-14 53.7 0.0 3.1e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637444|ref|YP_977667.1| - 2.2e-13 50.8 0.0 3.6e-13 50.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121637444|ref|YP_977667.1| - 1.8e-10 40.5 0.0 2.7e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 gi|121637444|ref|YP_977667.1| - 9.3e-06 24.5 0.0 1.2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase MTS PF05175.14 gi|121637444|ref|YP_977667.1| - 0.00058 19.5 0.0 0.00091 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 gi|121637444|ref|YP_977667.1| - 0.0029 17.5 0.0 0.0046 16.8 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase DUF938 PF06080.12 gi|121637444|ref|YP_977667.1| - 0.003 17.4 0.0 0.0095 15.7 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF938) MetW PF07021.12 gi|121637444|ref|YP_977667.1| - 0.012 15.2 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|121637444|ref|YP_977667.1| - 0.031 13.6 0.0 0.046 13.0 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_24 PF13578.6 gi|121637444|ref|YP_977667.1| - 0.032 15.3 0.0 0.07 14.2 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Pox_MCEL PF03291.16 gi|121637444|ref|YP_977667.1| - 0.28 10.3 0.0 3.1 6.8 0.0 2.0 2 0 0 2 2 2 0 mRNA capping enzyme Glyco_transf_28 PF03033.20 gi|121637445|ref|YP_977668.1| - 7.8e-09 35.7 0.0 1.6e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain UDPGT PF00201.18 gi|121637445|ref|YP_977668.1| - 0.004 16.0 0.0 0.0093 14.8 0.0 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 gi|121637445|ref|YP_977668.1| - 0.012 15.6 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain Glyco_tranf_2_3 PF13641.6 gi|121637446|ref|YP_977669.1| - 0.0088 16.0 0.2 0.017 15.1 0.1 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_28 PF03033.20 gi|121637447|ref|YP_977670.1| - 9.3e-09 35.5 0.0 1.7e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain UDPGT PF00201.18 gi|121637447|ref|YP_977670.1| - 0.15 10.8 0.1 0.49 9.1 0.0 1.8 2 0 0 2 2 2 0 UDP-glucoronosyl and UDP-glucosyl transferase Acyl_transf_1 PF00698.21 gi|121637448|ref|YP_977671.1| - 1.2e-102 343.7 4.2 1.8e-102 343.1 4.2 1.3 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121637448|ref|YP_977671.1| - 8e-90 300.8 0.0 2.5e-89 299.2 0.0 1.9 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121637448|ref|YP_977671.1| - 5.9e-58 195.7 2.4 2.6e-57 193.6 0.2 2.6 2 0 0 2 2 2 1 KR domain PS-DH PF14765.6 gi|121637448|ref|YP_977671.1| - 3.9e-48 164.2 6.6 9.3e-48 163.0 6.6 1.7 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121637448|ref|YP_977671.1| - 3.9e-38 130.1 1.0 3.9e-38 130.1 1.0 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N PF00107.26 gi|121637448|ref|YP_977671.1| - 6e-21 74.8 0.6 4.9e-20 71.8 0.1 2.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637448|ref|YP_977671.1| - 1.1e-17 65.3 0.0 1.1e-16 62.1 0.0 2.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121637448|ref|YP_977671.1| - 4.1e-12 46.5 0.0 1.3e-11 44.9 0.0 1.9 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension adh_short PF00106.25 gi|121637448|ref|YP_977671.1| - 2.2e-09 37.1 0.2 1.5e-08 34.3 0.0 2.4 2 0 0 2 2 2 1 short chain dehydrogenase PP-binding PF00550.25 gi|121637448|ref|YP_977671.1| - 3.2e-08 33.8 0.4 8.3e-08 32.5 0.4 1.8 1 0 0 1 1 1 1 Phosphopantetheine attachment site Thiolase_N PF00108.23 gi|121637448|ref|YP_977671.1| - 2e-07 30.7 0.2 4.9e-07 29.4 0.2 1.6 1 0 0 1 1 1 1 Thiolase, N-terminal domain ADH_N PF08240.12 gi|121637448|ref|YP_977671.1| - 4.9e-07 29.6 0.0 1.6e-06 28.0 0.0 1.9 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain RmlD_sub_bind PF04321.17 gi|121637448|ref|YP_977671.1| - 0.053 12.6 0.5 0.3 10.2 0.1 2.2 2 0 0 2 2 2 0 RmlD substrate binding domain PPTA PF01239.22 gi|121637448|ref|YP_977671.1| - 0.44 10.4 1.2 19 5.1 0.2 2.5 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat AMP-binding PF00501.28 gi|121637450|ref|YP_977673.1| - 2.9e-73 246.9 0.0 3.5e-73 246.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ADH_N PF08240.12 gi|121637451|ref|YP_977674.1| - 1.7e-25 89.0 0.3 3.3e-25 88.1 0.3 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121637451|ref|YP_977674.1| - 2.4e-20 72.8 3.1 4.1e-20 72.1 3.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|121637451|ref|YP_977674.1| - 0.00046 19.7 0.3 0.00068 19.2 0.3 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus DapB_N PF01113.20 gi|121637451|ref|YP_977674.1| - 0.029 14.5 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ADH_zinc_N_2 PF13602.6 gi|121637451|ref|YP_977674.1| - 0.061 14.4 3.1 0.13 13.3 2.1 2.0 2 1 1 3 3 3 0 Zinc-binding dehydrogenase GHMP_kinases_C PF08544.13 gi|121637451|ref|YP_977674.1| - 0.2 12.0 1.4 0.32 11.4 0.1 2.0 2 0 0 2 2 2 0 GHMP kinases C terminal AlaDh_PNT_C PF01262.21 gi|121637451|ref|YP_977674.1| - 0.47 9.7 6.6 1 8.6 6.6 1.5 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain CMD PF02627.20 gi|121637452|ref|YP_977675.1| - 1.2e-16 60.5 0.0 2.4e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family 4HBT PF03061.22 gi|121637453|ref|YP_977676.1| - 3.2e-12 46.6 0.4 4.2e-12 46.3 0.4 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|121637453|ref|YP_977676.1| - 5.5e-10 39.5 0.0 6.5e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 gi|121637453|ref|YP_977676.1| - 0.00067 20.0 0.1 0.00072 19.9 0.1 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily NMO PF03060.15 gi|121637454|ref|YP_977677.1| - 2.7e-56 191.4 0.1 4e-56 190.8 0.1 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|121637454|ref|YP_977677.1| - 4.8e-10 39.0 3.3 7.8e-10 38.3 3.3 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|121637454|ref|YP_977677.1| - 1.1e-05 24.7 0.0 0.00017 20.7 0.2 2.0 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain PEP_hydrolase PF09370.10 gi|121637454|ref|YP_977677.1| - 0.0067 15.7 0.2 0.013 14.8 0.2 1.5 1 0 0 1 1 1 1 Phosphoenolpyruvate hydrolase-like ThiG PF05690.14 gi|121637454|ref|YP_977677.1| - 0.035 13.4 1.0 0.053 12.8 1.0 1.2 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|121637454|ref|YP_977677.1| - 0.044 13.3 0.1 0.071 12.6 0.1 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein Glu_synthase PF01645.17 gi|121637454|ref|YP_977677.1| - 1 8.5 4.6 6 5.9 4.6 2.0 1 1 0 1 1 1 0 Conserved region in glutamate synthase TetR_N PF00440.23 gi|121637455|ref|YP_977678.1| - 5.6e-20 70.9 1.2 1.8e-19 69.3 1.2 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 gi|121637455|ref|YP_977678.1| - 4.5e-06 27.4 3.1 4.5e-06 27.4 3.1 2.4 3 0 0 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|121637455|ref|YP_977678.1| - 3.5e-05 24.0 0.4 9.2e-05 22.7 0.4 1.7 1 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain tRNA-synt_1 PF00133.22 gi|121637457|ref|YP_977680.1| - 6.8e-180 599.3 0.0 8.8e-180 598.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|121637457|ref|YP_977680.1| - 1e-23 83.9 0.0 1.8e-23 83.2 0.0 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|121637457|ref|YP_977680.1| - 3.4e-18 65.6 0.3 1.3e-06 27.4 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|121637457|ref|YP_977680.1| - 0.00013 21.5 0.0 0.00088 18.7 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain IMS PF00817.20 gi|121637458|ref|YP_977681.1| - 2.2e-35 121.9 0.0 4.9e-35 120.7 0.0 1.6 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.8 gi|121637458|ref|YP_977681.1| - 2.8e-19 70.0 0.1 1.9e-18 67.3 0.1 2.1 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|121637458|ref|YP_977681.1| - 1.5e-07 31.4 0.0 3.3e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 IMS family HHH motif DUF3553 PF12073.8 gi|121637458|ref|YP_977681.1| - 0.0065 16.2 2.5 0.036 13.8 1.2 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF3553) Asparaginase PF00710.20 gi|121637459|ref|YP_977682.1| - 4.4e-44 150.3 0.0 6.6e-44 149.7 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|121637459|ref|YP_977682.1| - 3.7e-19 69.0 1.5 2.8e-18 66.2 0.7 2.5 3 0 0 3 3 3 1 Glutaminase/Asparaginase C-terminal domain Peptidase_A8 PF01252.18 gi|121637460|ref|YP_977683.1| - 3.6e-30 105.0 2.9 4.3e-30 104.8 2.9 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II SH3_3 PF08239.11 gi|121637460|ref|YP_977683.1| - 0.064 13.6 0.0 0.15 12.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial SH3 domain PseudoU_synth_2 PF00849.22 gi|121637461|ref|YP_977684.1| - 1.2e-29 103.5 0.0 4.7e-29 101.5 0.0 1.9 2 0 0 2 2 2 1 RNA pseudouridylate synthase S4 PF01479.25 gi|121637461|ref|YP_977684.1| - 0.00012 21.7 0.0 0.00026 20.6 0.0 1.6 1 0 0 1 1 1 1 S4 domain MliC PF09864.9 gi|121637462|ref|YP_977685.1| - 1.5e-13 50.5 0.0 2.8e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 Membrane-bound lysozyme-inhibitor of c-type lysozyme LprI PF07007.12 gi|121637462|ref|YP_977685.1| - 0.00011 22.8 6.2 0.00018 22.1 6.2 1.3 1 0 0 1 1 1 1 Lysozyme inhibitor LprI Bac_globin PF01152.21 gi|121637463|ref|YP_977686.1| - 7.5e-35 119.7 0.0 8.5e-35 119.5 0.0 1.0 1 0 0 1 1 1 1 Bacterial-like globin Protoglobin PF11563.8 gi|121637463|ref|YP_977686.1| - 0.024 14.5 0.0 0.04 13.8 0.0 1.4 1 1 0 1 1 1 0 Protoglobin adh_short PF00106.25 gi|121637464|ref|YP_977687.1| - 2.6e-46 157.5 0.3 3.7e-46 157.1 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637464|ref|YP_977687.1| - 1.5e-31 109.7 0.2 2.3e-31 109.2 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637464|ref|YP_977687.1| - 1.7e-13 50.9 0.5 2.8e-13 50.2 0.5 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|121637464|ref|YP_977687.1| - 0.00025 21.0 0.5 0.00057 19.8 0.5 1.5 1 1 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|121637464|ref|YP_977687.1| - 0.00057 19.4 0.3 0.0064 16.0 0.3 2.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Ribosomal_S6e PF01092.19 gi|121637464|ref|YP_977687.1| - 0.0033 17.4 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S6e LDcluster4 PF18306.1 gi|121637464|ref|YP_977687.1| - 0.0038 16.8 0.8 0.0065 16.1 0.8 1.3 1 0 0 1 1 1 1 SLOG cluster4 family Abi_C PF14355.6 gi|121637464|ref|YP_977687.1| - 0.079 13.1 0.0 0.19 11.9 0.0 1.7 1 0 0 1 1 1 0 Abortive infection C-terminus Eno-Rase_NADH_b PF12242.8 gi|121637464|ref|YP_977687.1| - 0.1 12.4 0.1 0.22 11.3 0.1 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TGBp3 PF02495.17 gi|121637465|ref|YP_977688.1| - 0.077 12.7 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 Triple gene block 3 adh_short PF00106.25 gi|121637466|ref|YP_977689.1| - 8.8e-31 106.9 0.0 1.1e-30 106.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637466|ref|YP_977689.1| - 9.5e-20 71.2 0.0 1.1e-19 70.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637466|ref|YP_977689.1| - 0.00066 19.6 0.0 0.0011 18.9 0.0 1.4 1 1 0 1 1 1 1 KR domain Polyketide_cyc2 PF10604.9 gi|121637468|ref|YP_977691.1| - 8.1e-24 84.5 0.5 8.8e-24 84.4 0.5 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DNA_pol3_alpha PF07733.12 gi|121637469|ref|YP_977692.1| - 9.2e-92 307.3 0.0 2.6e-91 305.8 0.0 1.7 2 0 0 2 2 2 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 gi|121637469|ref|YP_977692.1| - 1.8e-61 206.3 0.0 2.6e-61 205.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain PHP PF02811.19 gi|121637469|ref|YP_977692.1| - 2.1e-46 158.3 0.0 3.8e-46 157.4 0.0 1.5 1 0 0 1 1 1 1 PHP domain HHH_6 PF14579.6 gi|121637469|ref|YP_977692.1| - 1e-23 83.3 0.0 3.1e-23 81.8 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 gi|121637469|ref|YP_977692.1| - 2.6e-06 27.3 0.0 8.9e-06 25.6 0.0 2.0 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain Pentapeptide_2 PF01469.18 gi|121637470|ref|YP_977693.1| - 5.8e-81 266.1 331.6 4.7e-12 45.6 20.7 13.3 7 3 6 13 13 13 13 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121637470|ref|YP_977693.1| - 3.2e-57 193.0 27.5 5.1e-57 192.4 27.5 1.3 1 0 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121637470|ref|YP_977693.1| - 0.76 10.1 6.5 1.4 9.2 6.5 1.4 1 0 0 1 1 1 0 Proteins of 100 residues with WXG TPR_16 PF13432.6 gi|121637470|ref|YP_977693.1| - 8.9 7.1 17.0 0.96 10.1 12.4 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat AMP-binding PF00501.28 gi|121637471|ref|YP_977694.1| - 1.9e-90 303.5 0.1 3e-90 302.9 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme Acyltransferase PF01553.21 gi|121637472|ref|YP_977695.1| - 3.9e-08 33.0 0.0 1e-07 31.7 0.0 1.7 1 0 0 1 1 1 1 Acyltransferase HNH_repeat PF18780.1 gi|121637472|ref|YP_977695.1| - 0.48 10.3 2.1 0.36 10.7 0.1 1.9 2 0 0 2 2 2 0 Homing endonuclease repeat FAD_binding_2 PF00890.24 gi|121637473|ref|YP_977696.1| - 3.9e-113 378.7 0.1 5.4e-113 378.2 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|121637473|ref|YP_977696.1| - 8.5e-36 122.8 0.0 1.4e-35 122.1 0.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|121637473|ref|YP_977696.1| - 2.4e-07 30.3 0.8 0.00021 20.6 0.3 3.1 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121637473|ref|YP_977696.1| - 0.00053 19.7 1.4 0.0021 17.7 1.5 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121637473|ref|YP_977696.1| - 0.0011 18.3 1.5 0.0031 16.8 0.2 2.0 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 gi|121637473|ref|YP_977696.1| - 0.0069 15.1 0.7 0.017 13.9 0.0 1.9 3 0 0 3 3 3 1 HI0933-like protein GIDA PF01134.22 gi|121637473|ref|YP_977696.1| - 0.013 14.6 0.5 0.039 13.0 0.3 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A GFO_IDH_MocA PF01408.22 gi|121637473|ref|YP_977696.1| - 0.078 13.8 0.1 0.17 12.7 0.1 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Lycopene_cycl PF05834.12 gi|121637473|ref|YP_977696.1| - 0.082 11.9 0.5 0.13 11.3 0.5 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Fumarate_red_C PF02300.17 gi|121637474|ref|YP_977697.1| - 3.3e-39 133.9 8.1 4.9e-39 133.3 8.1 1.2 1 0 0 1 1 1 1 Fumarate reductase subunit C Fer2_3 PF13085.6 gi|121637474|ref|YP_977697.1| - 2e-32 111.4 0.0 3.3e-32 110.7 0.0 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|121637474|ref|YP_977697.1| - 2.8e-12 46.9 0.7 4.8e-12 46.1 0.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|121637474|ref|YP_977697.1| - 4.2e-09 36.4 1.4 7.7e-09 35.5 1.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121637474|ref|YP_977697.1| - 2e-07 31.5 2.1 4.3e-07 30.4 2.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|121637474|ref|YP_977697.1| - 2.6e-07 31.1 0.9 6.2e-07 29.9 1.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|121637474|ref|YP_977697.1| - 6.3e-06 27.0 0.6 1.1e-05 26.2 0.6 1.5 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|121637474|ref|YP_977697.1| - 7.2e-06 25.6 8.1 1.8e-05 24.3 0.5 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|121637474|ref|YP_977697.1| - 2.1e-05 24.6 5.1 0.00053 20.1 6.1 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121637474|ref|YP_977697.1| - 0.00037 20.5 11.5 0.0011 18.9 3.5 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|121637474|ref|YP_977697.1| - 0.0017 18.7 0.7 0.0017 18.7 0.7 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|121637474|ref|YP_977697.1| - 0.0049 16.9 1.3 0.0049 16.9 1.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|121637474|ref|YP_977697.1| - 0.0055 16.8 3.3 0.028 14.5 0.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|121637474|ref|YP_977697.1| - 0.006 16.8 0.5 3.1 8.0 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|121637474|ref|YP_977697.1| - 0.0078 16.0 0.3 1.6 8.5 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 gi|121637474|ref|YP_977697.1| - 0.029 15.3 12.5 0.19 12.7 4.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|121637474|ref|YP_977697.1| - 2.3 8.8 9.5 0.07 13.7 1.9 2.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|121637474|ref|YP_977697.1| - 6.5 7.6 5.8 45 4.9 2.1 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fumarate_red_D PF02313.17 gi|121637475|ref|YP_977698.1| - 2.2e-32 111.5 6.4 2.5e-32 111.3 6.4 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit D Sdh_cyt PF01127.22 gi|121637475|ref|YP_977698.1| - 0.00089 19.3 3.5 0.0011 19.0 3.5 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TetR_C_11 PF16859.5 gi|121637476|ref|YP_977699.1| - 8.1e-26 90.6 1.3 1e-25 90.3 0.1 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637476|ref|YP_977699.1| - 4e-16 58.5 0.3 1e-15 57.2 0.2 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_7 PF14246.6 gi|121637476|ref|YP_977699.1| - 0.014 15.4 0.0 0.031 14.3 0.0 1.6 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain TetR_C_31 PF17940.1 gi|121637476|ref|YP_977699.1| - 0.028 14.6 0.2 0.12 12.6 0.0 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ParE_toxin PF05016.15 gi|121637476|ref|YP_977699.1| - 0.074 13.7 0.1 0.42 11.3 0.1 2.2 1 1 0 1 1 1 0 ParE toxin of type II toxin-antitoxin system, parDE HTH_Tnp_1_2 PF13022.6 gi|121637476|ref|YP_977699.1| - 0.11 12.7 0.0 0.75 10.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix of insertion element transposase Mycobact_memb PF05423.13 gi|121637477|ref|YP_977700.1| - 2.6e-60 202.4 0.5 2.9e-60 202.2 0.5 1.0 1 0 0 1 1 1 1 Mycobacterium membrane protein MMPL PF03176.15 gi|121637478|ref|YP_977701.1| - 8.6e-214 708.6 31.6 6e-112 373.8 5.8 2.7 3 0 0 3 3 3 2 MMPL family Sec34 PF04136.15 gi|121637478|ref|YP_977701.1| - 0.17 11.8 1.0 0.3 11.0 1.0 1.4 1 0 0 1 1 1 0 Sec34-like family kleA_kleC PF17383.2 gi|121637478|ref|YP_977701.1| - 0.17 12.2 0.6 0.46 10.8 0.6 1.7 1 0 0 1 1 1 0 Uncharacterized KorC regulated protein A F420H2_quin_red PF04075.14 gi|121637479|ref|YP_977702.1| - 6.2e-58 194.5 0.5 7e-58 194.4 0.5 1.0 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase PALP PF00291.25 gi|121637480|ref|YP_977703.1| - 3.5e-76 256.4 7.4 4.2e-76 256.2 7.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Thr_dehydrat_C PF00585.18 gi|121637480|ref|YP_977703.1| - 1.9e-29 101.3 0.0 2.9e-29 100.7 0.0 1.3 1 0 0 1 1 1 1 C-terminal regulatory domain of Threonine dehydratase DAGK_cat PF00781.24 gi|121637480|ref|YP_977703.1| - 0.21 11.2 0.9 0.37 10.4 0.9 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain VapB_antitoxin PF09957.9 gi|121637481|ref|YP_977704.1| - 9.2e-19 67.1 0.1 1.3e-18 66.7 0.1 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB PIN PF01850.21 gi|121637482|ref|YP_977705.1| - 2e-17 63.9 2.5 2.2e-17 63.7 2.5 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|121637482|ref|YP_977705.1| - 0.037 14.8 0.3 0.056 14.2 0.3 1.4 1 1 0 1 1 1 0 PIN domain DUF3459 PF11941.8 gi|121637483|ref|YP_977706.1| - 3.1e-16 59.5 0.2 5.8e-16 58.6 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) Alpha-amylase PF00128.24 gi|121637484|ref|YP_977707.1| - 1.2e-17 64.6 0.0 7e-13 48.9 0.0 2.1 1 1 0 2 2 2 2 Alpha amylase, catalytic domain CBM_48 PF02922.18 gi|121637484|ref|YP_977707.1| - 0.02 15.2 0.0 0.051 13.9 0.0 1.6 1 0 0 1 1 1 0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 gi|121637485|ref|YP_977708.1| - 4e-20 72.7 0.0 1.4e-15 57.7 0.0 3.2 3 0 0 3 3 3 3 Alpha amylase, catalytic domain CBM_48 PF02922.18 gi|121637486|ref|YP_977709.1| - 2.9e-21 75.6 0.0 7.7e-21 74.2 0.0 1.8 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 gi|121637486|ref|YP_977709.1| - 3.8e-15 56.3 0.0 2e-06 27.6 0.0 2.5 1 1 1 2 2 2 2 Alpha amylase, catalytic domain Acyl_transf_3 PF01757.22 gi|121637487|ref|YP_977710.1| - 1.2e-16 60.7 30.5 2.5e-16 59.7 30.5 1.5 1 1 0 1 1 1 1 Acyltransferase family Neurensin PF14927.6 gi|121637487|ref|YP_977710.1| - 0.095 12.4 0.1 3.6 7.3 0.0 2.7 2 1 1 3 3 3 0 Neurensin NLPC_P60 PF00877.19 gi|121637488|ref|YP_977711.1| - 1.7e-26 92.3 0.0 2.7e-26 91.6 0.0 1.3 1 0 0 1 1 1 1 NlpC/P60 family Flu_C_NS1 PF03506.13 gi|121637488|ref|YP_977711.1| - 0.62 10.0 2.6 6.1 6.8 0.1 2.1 1 1 1 2 2 2 0 Influenza C non-structural protein (NS1) DUF1177 PF06675.11 gi|121637489|ref|YP_977712.1| - 0.24 10.2 0.2 0.28 10.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1177) Aminotran_3 PF00202.21 gi|121637490|ref|YP_977713.1| - 1.1e-112 376.6 0.0 1.4e-112 376.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|121637490|ref|YP_977713.1| - 0.0044 16.2 0.0 0.0086 15.3 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_1_2 PF00155.21 gi|121637491|ref|YP_977714.1| - 4.9e-57 193.8 0.0 5.5e-57 193.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|121637491|ref|YP_977714.1| - 1.8e-07 30.4 0.0 2.7e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|121637491|ref|YP_977714.1| - 1e-06 28.4 0.0 1.6e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|121637491|ref|YP_977714.1| - 5.8e-06 25.1 0.0 7.9e-06 24.6 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|121637491|ref|YP_977714.1| - 0.0018 17.7 0.0 0.0042 16.4 0.0 1.5 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|121637491|ref|YP_977714.1| - 0.0024 16.6 0.0 0.003 16.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III AAA_26 PF13500.6 gi|121637492|ref|YP_977715.1| - 9.5e-28 97.4 0.1 1.2e-27 97.1 0.1 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121637492|ref|YP_977715.1| - 1.7e-06 28.1 0.0 3.4e-06 27.1 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 gi|121637492|ref|YP_977715.1| - 0.0011 18.3 5.0 0.0035 16.7 2.2 2.5 2 1 1 3 3 3 1 Domain of unknown function (DUF1611_C) P-loop domain CBP_BcsQ PF06564.12 gi|121637492|ref|YP_977715.1| - 0.14 11.6 2.2 0.16 11.4 0.5 1.8 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ ParA PF10609.9 gi|121637492|ref|YP_977715.1| - 0.15 11.5 1.2 0.25 10.7 1.2 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|121637492|ref|YP_977715.1| - 0.87 8.7 2.3 1.5 8.0 2.3 1.3 1 0 0 1 1 1 0 Anion-transporting ATPase 2_5_RNA_ligase2 PF13563.6 gi|121637493|ref|YP_977716.1| - 4e-07 30.1 0.0 4.4e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily DUF222 PF02720.17 gi|121637494|ref|YP_977717.1| - 3.4e-64 217.2 3.4 4.3e-64 216.9 3.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637494|ref|YP_977717.1| - 0.015 15.5 0.1 0.015 15.5 0.1 2.4 3 0 0 3 3 3 0 HNH endonuclease DUF222 PF02720.17 gi|121637495|ref|YP_977718.1| - 1.7e-19 70.4 2.5 2.1e-19 70.2 2.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF222) Radical_SAM PF04055.21 gi|121637496|ref|YP_977719.1| - 5.9e-15 56.0 0.1 1.9e-14 54.4 0.1 1.8 1 1 1 2 2 2 1 Radical SAM superfamily BATS PF06968.13 gi|121637496|ref|YP_977719.1| - 6.6e-12 45.4 0.0 1.7e-11 44.1 0.0 1.7 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Nudix_N_2 PF14803.6 gi|121637497|ref|YP_977720.1| - 0.018 14.9 0.3 0.029 14.3 0.3 1.4 1 0 0 1 1 1 0 Nudix N-terminal zf-NADH-PPase PF09297.11 gi|121637497|ref|YP_977720.1| - 0.021 14.5 4.7 0.062 13.0 4.7 1.8 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain DmpG_comm PF07836.11 gi|121637497|ref|YP_977720.1| - 0.063 12.8 0.0 0.098 12.2 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain Zn_ribbon_recom PF13408.6 gi|121637497|ref|YP_977720.1| - 0.11 13.0 0.4 0.19 12.3 0.4 1.3 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain DUF2567 PF10821.8 gi|121637498|ref|YP_977721.1| - 1e-78 263.1 9.4 1.2e-78 262.9 9.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2567) MerC PF03203.14 gi|121637498|ref|YP_977721.1| - 3.7 8.0 10.1 4.7 7.7 6.6 2.6 1 1 1 2 2 2 0 MerC mercury resistance protein LIP PF03583.14 gi|121637499|ref|YP_977722.1| - 2.9e-105 351.7 0.0 3.6e-105 351.4 0.0 1.1 1 0 0 1 1 1 1 Secretory lipase Peptidase_S9 PF00326.21 gi|121637499|ref|YP_977722.1| - 0.27 10.7 0.8 6 6.3 0.2 2.1 2 0 0 2 2 2 0 Prolyl oligopeptidase family NUDIX PF00293.28 gi|121637500|ref|YP_977723.1| - 1.4e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain PapA_C PF16911.5 gi|121637500|ref|YP_977723.1| - 0.035 14.2 0.1 0.074 13.1 0.1 1.6 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus NUDIX_2 PF13869.6 gi|121637500|ref|YP_977723.1| - 0.15 11.7 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Nucleotide hydrolase NadA PF02445.16 gi|121637501|ref|YP_977724.1| - 1.7e-107 359.1 0.0 1.9e-107 358.9 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein FAD_binding_2 PF00890.24 gi|121637502|ref|YP_977725.1| - 3.7e-88 296.4 17.0 3.7e-88 296.4 17.0 1.9 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|121637502|ref|YP_977725.1| - 4.2e-08 33.2 0.5 2.6e-05 24.2 0.2 2.3 1 1 1 2 2 2 2 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|121637502|ref|YP_977725.1| - 1.9e-07 30.6 9.2 0.0019 17.5 4.5 4.0 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121637502|ref|YP_977725.1| - 0.00011 21.9 11.3 0.00028 20.6 11.0 1.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|121637502|ref|YP_977725.1| - 0.00011 21.6 2.4 0.00011 21.6 2.4 1.7 2 0 0 2 2 1 1 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 gi|121637502|ref|YP_977725.1| - 0.00015 20.6 4.8 0.00086 18.1 1.9 2.4 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.7 gi|121637502|ref|YP_977725.1| - 0.0002 20.9 6.4 0.0002 20.9 6.4 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121637502|ref|YP_977725.1| - 0.00075 19.7 0.8 0.00075 19.7 0.8 2.7 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|121637502|ref|YP_977725.1| - 0.0018 17.4 3.9 0.0018 17.4 3.9 2.7 3 0 0 3 3 3 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|121637502|ref|YP_977725.1| - 0.0033 16.7 0.7 0.0094 15.2 0.3 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|121637502|ref|YP_977725.1| - 0.004 16.5 2.1 0.013 14.8 1.7 2.0 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|121637502|ref|YP_977725.1| - 0.053 12.6 0.8 0.11 11.6 0.8 1.5 1 0 0 1 1 1 0 Lycopene cyclase protein QRPTase_C PF01729.19 gi|121637503|ref|YP_977726.1| - 5.6e-62 208.5 0.1 7.5e-62 208.1 0.1 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|121637503|ref|YP_977726.1| - 1.2e-20 73.3 0.0 2.1e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain DUF1153 PF06627.11 gi|121637503|ref|YP_977726.1| - 0.12 12.5 0.0 0.49 10.6 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1153) TPR_16 PF13432.6 gi|121637503|ref|YP_977726.1| - 0.45 11.2 4.3 0.42 11.3 0.7 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Methyltransf_11 PF08241.12 gi|121637504|ref|YP_977727.1| - 2.4e-06 28.1 0.0 1.1e-05 25.9 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637504|ref|YP_977727.1| - 0.0014 19.3 0.0 0.0035 18.0 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain F420H2_quin_red PF04075.14 gi|121637505|ref|YP_977728.1| - 2.3e-05 24.5 0.1 2.5e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase Histidinol_dh PF00815.20 gi|121637506|ref|YP_977729.1| - 3.4e-154 513.8 3.9 3.8e-154 513.6 3.9 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Aminotran_1_2 PF00155.21 gi|121637507|ref|YP_977730.1| - 2.5e-53 181.6 0.0 3.2e-53 181.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II IGPD PF00475.18 gi|121637508|ref|YP_977731.1| - 1.1e-57 194.4 0.8 1.4e-57 194.0 0.8 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Fae PF08714.11 gi|121637508|ref|YP_977731.1| - 0.011 15.7 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 Formaldehyde-activating enzyme (Fae) GATase PF00117.28 gi|121637509|ref|YP_977732.1| - 1.9e-17 63.7 0.0 2.3e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|121637509|ref|YP_977732.1| - 0.00011 21.9 0.1 0.00015 21.4 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|121637509|ref|YP_977732.1| - 0.00041 20.2 0.0 0.0079 16.1 0.0 2.0 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|121637509|ref|YP_977732.1| - 0.0025 17.6 0.8 0.018 14.8 0.3 2.1 2 0 0 2 2 2 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|121637509|ref|YP_977732.1| - 0.092 12.6 0.4 0.13 12.1 0.4 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family His_biosynth PF00977.21 gi|121637510|ref|YP_977733.1| - 2.1e-59 200.8 1.2 2.4e-59 200.6 1.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|121637510|ref|YP_977733.1| - 6e-08 32.4 1.8 0.0012 18.3 0.1 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|121637510|ref|YP_977733.1| - 1.7e-06 27.4 0.0 0.048 12.7 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) IMPDH PF00478.25 gi|121637510|ref|YP_977733.1| - 0.016 14.2 0.3 0.8 8.6 0.0 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|121637510|ref|YP_977733.1| - 0.81 8.7 4.6 0.32 10.0 0.4 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase Inositol_P PF00459.25 gi|121637511|ref|YP_977734.1| - 4.1e-50 170.8 0.1 5.2e-50 170.5 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family His_biosynth PF00977.21 gi|121637512|ref|YP_977735.1| - 7.3e-86 287.3 0.5 8.4e-86 287.1 0.5 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|121637512|ref|YP_977735.1| - 2.8e-07 30.3 11.8 0.0021 17.5 0.9 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 gi|121637512|ref|YP_977735.1| - 4.2e-07 29.5 6.2 0.0049 16.2 0.7 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|121637512|ref|YP_977735.1| - 1.3e-05 24.6 2.7 0.022 14.1 0.1 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase IMPDH PF00478.25 gi|121637512|ref|YP_977735.1| - 1.6e-05 24.1 5.1 0.0032 16.5 0.7 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain G3P_antiterm PF04309.12 gi|121637512|ref|YP_977735.1| - 1.9e-05 24.2 0.8 0.0099 15.3 0.1 2.2 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator DHO_dh PF01180.21 gi|121637512|ref|YP_977735.1| - 3.7e-05 23.1 1.2 0.049 12.9 0.1 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase Dus PF01207.17 gi|121637512|ref|YP_977735.1| - 0.011 14.9 0.1 2.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) DUF5423 PF17461.2 gi|121637512|ref|YP_977735.1| - 0.64 8.8 1.9 1.2 8.0 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5423) FMN_dh PF01070.18 gi|121637512|ref|YP_977735.1| - 5.8 5.8 19.7 1.1 8.2 1.2 2.6 1 1 2 3 3 3 0 FMN-dependent dehydrogenase PRA-CH PF01502.18 gi|121637513|ref|YP_977736.1| - 2.7e-34 116.8 0.8 3.8e-34 116.4 0.8 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Na_Ca_ex PF01699.24 gi|121637514|ref|YP_977737.1| - 9.5e-27 93.8 37.0 5.1e-14 52.5 14.3 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein AhpC-TSA PF00578.21 gi|121637515|ref|YP_977738.1| - 2.8e-30 104.8 0.0 3.3e-30 104.5 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121637515|ref|YP_977738.1| - 6.3e-21 74.6 0.0 7.4e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|121637515|ref|YP_977738.1| - 0.0007 19.7 0.0 0.00092 19.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme Chorismate_bind PF00425.18 gi|121637516|ref|YP_977739.1| - 2.5e-93 312.3 0.0 8.6e-93 310.6 0.0 1.7 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|121637516|ref|YP_977739.1| - 4e-34 117.9 0.0 1.2e-31 109.8 0.0 2.9 3 0 0 3 3 3 2 Anthranilate synthase component I, N terminal region Trp_oprn_chp PF09534.10 gi|121637517|ref|YP_977740.1| - 5.7e-45 153.3 26.4 6.7e-45 153.1 26.4 1.0 1 0 0 1 1 1 1 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Acyl_transf_3 PF01757.22 gi|121637517|ref|YP_977740.1| - 7.9 5.4 15.5 2.9 6.9 5.8 2.0 1 1 0 2 2 2 0 Acyltransferase family IGPS PF00218.21 gi|121637518|ref|YP_977741.1| - 2.2e-78 263.0 0.0 2.5e-78 262.8 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase OMPdecase PF00215.24 gi|121637518|ref|YP_977741.1| - 0.00029 20.5 0.1 0.00041 20.0 0.1 1.3 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family FMN_dh PF01070.18 gi|121637518|ref|YP_977741.1| - 0.0015 17.6 5.9 0.051 12.6 3.7 2.3 2 1 0 2 2 2 2 FMN-dependent dehydrogenase PALP PF00291.25 gi|121637519|ref|YP_977742.1| - 1.7e-51 175.4 3.4 2e-51 175.2 3.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Gmad2 PF10648.9 gi|121637519|ref|YP_977742.1| - 0.11 12.7 0.0 0.33 11.2 0.0 1.7 1 0 0 1 1 1 0 Immunoglobulin-like domain of bacterial spore germination Trp_syntA PF00290.20 gi|121637520|ref|YP_977743.1| - 1.7e-68 230.3 0.0 2e-68 230.1 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|121637520|ref|YP_977743.1| - 0.0014 18.1 0.2 0.0023 17.4 0.2 1.2 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|121637520|ref|YP_977743.1| - 0.0041 16.6 0.3 0.0072 15.8 0.3 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein BtpA PF03437.15 gi|121637520|ref|YP_977743.1| - 0.0053 16.2 0.5 0.013 15.0 0.2 1.7 2 0 0 2 2 2 1 BtpA family KDGP_aldolase PF07071.11 gi|121637520|ref|YP_977743.1| - 0.037 13.8 0.2 6.1 6.6 0.2 2.2 2 0 0 2 2 2 0 KDGP aldolase LGT PF01790.18 gi|121637521|ref|YP_977744.1| - 6.1e-57 192.6 11.2 7.4e-57 192.4 11.2 1.1 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase TM2 PF05154.16 gi|121637522|ref|YP_977745.1| - 3.6e-11 43.2 8.4 5e-11 42.7 8.4 1.2 1 0 0 1 1 1 1 TM2 domain DUF2752 PF10825.8 gi|121637523|ref|YP_977746.1| - 9.8e-19 67.2 1.2 9.8e-19 67.2 1.2 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2752) FecCD PF01032.18 gi|121637523|ref|YP_977746.1| - 0.014 14.4 0.6 0.014 14.4 0.6 1.7 1 1 0 1 1 1 0 FecCD transport family DUF998 PF06197.13 gi|121637523|ref|YP_977746.1| - 0.12 12.0 10.0 0.35 10.4 10.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF998) DUF4131 PF13567.6 gi|121637523|ref|YP_977746.1| - 0.53 9.9 2.6 2.7 7.6 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) PK PF00224.21 gi|121637524|ref|YP_977747.1| - 4.4e-118 394.1 2.5 5.8e-118 393.7 2.5 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|121637524|ref|YP_977747.1| - 2.3e-23 82.7 0.0 1e-22 80.5 0.0 2.1 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|121637524|ref|YP_977747.1| - 2.5e-05 23.5 3.0 0.00047 19.4 1.7 2.9 2 1 1 3 3 3 1 HpcH/HpaI aldolase/citrate lyase family Acyl_CoA_thio PF02551.15 gi|121637525|ref|YP_977748.1| - 5.9e-61 204.1 0.1 2.3e-47 160.2 0.0 3.1 2 1 0 2 2 2 2 Acyl-CoA thioesterase 4HBT_3 PF13622.6 gi|121637525|ref|YP_977748.1| - 2.7e-44 152.3 1.1 3.2e-44 152.0 1.1 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF2156 PF09924.9 gi|121637526|ref|YP_977749.1| - 1e-66 225.0 0.0 1.2e-66 224.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) ABC_tran PF00005.27 gi|121637527|ref|YP_977750.1| - 5.6e-25 88.4 0.0 9.4e-25 87.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121637527|ref|YP_977750.1| - 1.1e-06 28.7 0.1 0.017 14.9 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane PF00664.23 gi|121637527|ref|YP_977750.1| - 9.8e-06 25.4 0.1 9.8e-06 25.4 0.1 1.8 2 0 0 2 2 2 1 ABC transporter transmembrane region AAA_16 PF13191.6 gi|121637527|ref|YP_977750.1| - 6e-05 23.5 0.3 6e-05 23.5 0.3 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|121637527|ref|YP_977750.1| - 0.0086 15.8 0.1 0.026 14.3 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 gi|121637527|ref|YP_977750.1| - 0.014 14.8 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 gi|121637527|ref|YP_977750.1| - 0.021 15.1 0.2 0.084 13.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|121637527|ref|YP_977750.1| - 0.027 13.9 0.0 0.067 12.6 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|121637527|ref|YP_977750.1| - 0.03 14.6 0.8 0.22 11.8 0.8 2.2 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|121637527|ref|YP_977750.1| - 0.12 12.3 0.4 0.31 11.0 0.2 1.8 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|121637527|ref|YP_977750.1| - 0.13 12.9 0.0 0.27 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|121637527|ref|YP_977750.1| - 0.13 12.4 0.0 0.38 10.8 0.0 1.8 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 gi|121637527|ref|YP_977750.1| - 0.23 11.1 0.0 0.39 10.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3742 PF12553.8 gi|121637527|ref|YP_977750.1| - 4.5 7.4 13.7 0.049 13.7 5.4 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF3742) ABC_tran PF00005.27 gi|121637528|ref|YP_977751.1| - 8.9e-27 94.3 0.0 1.4e-26 93.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 gi|121637528|ref|YP_977751.1| - 1.1e-13 51.5 0.2 1.7e-13 50.9 0.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_21 PF13304.6 gi|121637528|ref|YP_977751.1| - 3.6e-09 36.9 0.5 9.1e-05 22.4 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637528|ref|YP_977751.1| - 7e-08 32.2 0.0 0.0013 18.2 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121637528|ref|YP_977751.1| - 1.9e-05 24.3 0.1 5.1e-05 22.9 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121637528|ref|YP_977751.1| - 0.00028 21.5 0.1 0.00041 20.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|121637528|ref|YP_977751.1| - 0.0069 16.1 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|121637528|ref|YP_977751.1| - 0.013 15.2 12.3 0.019 14.7 7.1 3.0 2 1 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|121637528|ref|YP_977751.1| - 0.025 14.2 0.0 0.049 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|121637528|ref|YP_977751.1| - 0.032 14.1 0.1 0.084 12.8 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase MukB PF04310.12 gi|121637528|ref|YP_977751.1| - 0.053 13.3 0.2 0.053 13.3 0.2 1.6 2 0 0 2 2 2 0 MukB N-terminal AAA_22 PF13401.6 gi|121637528|ref|YP_977751.1| - 0.11 12.8 0.1 0.32 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain Cyt_bd_oxida_II PF02322.15 gi|121637529|ref|YP_977752.1| - 2.3e-100 335.9 37.9 2.6e-100 335.7 37.9 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Cyt_bd_oxida_I PF01654.17 gi|121637530|ref|YP_977753.1| - 2.2e-162 540.5 26.9 2.5e-162 540.3 26.9 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF308 PF03729.13 gi|121637531|ref|YP_977754.1| - 9.3e-23 80.4 60.1 2.4e-11 43.8 20.7 3.0 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) TMEM100 PF16311.5 gi|121637531|ref|YP_977754.1| - 4.4 6.9 16.3 4.1 7.0 3.5 2.9 3 0 0 3 3 3 0 Transmembrane protein 100 DUF2189 PF09955.9 gi|121637531|ref|YP_977754.1| - 6.6 7.0 22.8 0.86 9.9 0.6 3.0 2 1 1 3 3 3 0 Predicted integral membrane protein (DUF2189) Guanylate_cyc PF00211.20 gi|121637532|ref|YP_977755.1| - 1.2e-58 197.7 0.0 2e-58 197.0 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HNOBA PF07701.14 gi|121637532|ref|YP_977755.1| - 0.024 14.1 0.1 0.036 13.5 0.1 1.2 1 0 0 1 1 1 0 Heme NO binding associated RVT_3 PF13456.6 gi|121637532|ref|YP_977755.1| - 0.11 12.3 0.3 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 Reverse transcriptase-like Response_reg PF00072.24 gi|121637533|ref|YP_977756.1| - 1.6e-30 105.6 0.3 2.5e-30 104.9 0.3 1.3 1 0 0 1 1 1 1 Response regulator receiver domain ANTAR PF03861.14 gi|121637533|ref|YP_977756.1| - 1.7e-19 69.4 2.9 3.8e-19 68.3 0.8 2.3 2 0 0 2 2 2 1 ANTAR domain RE_XamI PF09572.10 gi|121637533|ref|YP_977756.1| - 0.057 13.1 0.1 0.083 12.6 0.1 1.3 1 0 0 1 1 1 0 XamI restriction endonuclease Thiolase_N PF00108.23 gi|121637534|ref|YP_977757.1| - 1.1e-09 38.0 0.0 5.7e-09 35.7 0.0 2.1 1 1 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|121637534|ref|YP_977757.1| - 2.3e-06 27.4 3.3 9.8e-06 25.3 3.3 1.9 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|121637534|ref|YP_977757.1| - 5e-05 23.1 1.3 0.0024 17.7 0.2 2.6 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.22 gi|121637534|ref|YP_977757.1| - 0.031 14.3 0.2 0.9 9.6 0.0 2.8 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain OB_aCoA_assoc PF01796.17 gi|121637535|ref|YP_977758.1| - 2.7e-13 49.7 0.3 4.2e-13 49.1 0.3 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|121637535|ref|YP_977758.1| - 2.3e-10 40.1 1.5 3.7e-10 39.5 1.5 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-tcix PF14952.6 gi|121637535|ref|YP_977758.1| - 0.00023 20.7 1.3 0.00036 20.1 1.3 1.2 1 0 0 1 1 1 1 Putative treble-clef, zinc-finger, Zn-binding zf-ribbon_3 PF13248.6 gi|121637535|ref|YP_977758.1| - 0.019 14.4 5.3 0.083 12.3 5.5 1.9 1 1 1 2 2 2 0 zinc-ribbon domain Rhodanese_C PF12368.8 gi|121637535|ref|YP_977758.1| - 0.099 13.0 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Rhodanase C-terminal DNA_pol_A PF00476.20 gi|121637536|ref|YP_977759.1| - 3.4e-145 483.8 0.0 4.6e-145 483.4 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family A 5_3_exonuc_N PF02739.16 gi|121637536|ref|YP_977759.1| - 4.5e-54 182.7 0.0 9.5e-54 181.6 0.0 1.6 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 gi|121637536|ref|YP_977759.1| - 2.2e-26 92.3 0.0 5.2e-26 91.1 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold NYN_YacP PF05991.11 gi|121637536|ref|YP_977759.1| - 0.0059 16.6 0.0 0.027 14.4 0.0 2.0 2 0 0 2 2 2 1 YacP-like NYN domain HHH_5 PF14520.6 gi|121637536|ref|YP_977759.1| - 0.0076 16.8 0.1 0.048 14.3 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|121637536|ref|YP_977759.1| - 0.031 14.1 0.0 0.094 12.6 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 gi|121637536|ref|YP_977759.1| - 0.052 13.7 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif Transposase_20 PF02371.16 gi|121637536|ref|YP_977759.1| - 0.1 12.9 0.0 0.29 11.5 0.0 1.8 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Sep15_SelM PF08806.11 gi|121637536|ref|YP_977759.1| - 0.18 12.0 0.1 2 8.6 0.0 2.5 2 0 0 2 2 2 0 Sep15/SelM redox domain DUF4880 PF16220.5 gi|121637536|ref|YP_977759.1| - 0.6 10.0 5.6 0.14 12.0 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4880) S1 PF00575.23 gi|121637537|ref|YP_977760.1| - 9.8e-83 272.5 28.2 2.3e-26 91.9 1.8 4.1 4 0 0 4 4 4 4 S1 RNA binding domain DUF2110 PF09883.9 gi|121637537|ref|YP_977760.1| - 1.3e-06 28.2 0.9 0.17 11.4 0.1 3.2 3 0 0 3 3 3 2 Uncharacterized protein conserved in archaea (DUF2110) S1_2 PF13509.6 gi|121637537|ref|YP_977760.1| - 1.9e-06 27.8 6.0 0.025 14.6 0.0 4.8 4 2 0 4 4 4 2 S1 domain PCB_OB PF17092.5 gi|121637537|ref|YP_977760.1| - 0.0035 18.1 8.7 0.52 11.1 0.1 4.3 3 2 2 5 5 5 2 Penicillin-binding protein OB-like domain RNase_II_C_S1 PF18614.1 gi|121637537|ref|YP_977760.1| - 0.021 14.7 4.6 0.73 9.8 0.3 3.5 3 0 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain RGCC PF15151.6 gi|121637537|ref|YP_977760.1| - 0.1 12.8 0.1 20 5.4 0.1 2.4 2 0 0 2 2 2 0 Response gene to complement 32 protein family CsrA PF02599.16 gi|121637537|ref|YP_977760.1| - 1.4 9.0 8.5 3.3 7.7 0.0 4.5 5 0 0 5 5 5 0 Global regulator protein family EFTUD2 PF16004.5 gi|121637537|ref|YP_977760.1| - 2.5 8.7 6.4 0.25 11.9 1.5 1.9 2 0 0 2 2 2 0 116 kDa U5 small nuclear ribonucleoprotein component N-terminus CoaE PF01121.20 gi|121637538|ref|YP_977761.1| - 3e-61 206.2 0.0 5.7e-61 205.3 0.0 1.5 1 0 0 1 1 1 1 Dephospho-CoA kinase GrpB PF04229.14 gi|121637538|ref|YP_977761.1| - 2.5e-40 138.3 0.0 3.9e-40 137.7 0.0 1.3 1 0 0 1 1 1 1 GrpB protein Cytidylate_kin2 PF13189.6 gi|121637538|ref|YP_977761.1| - 0.089 12.9 0.6 0.22 11.6 0.3 1.9 2 0 0 2 2 2 0 Cytidylate kinase-like family DUF402 PF04167.13 gi|121637539|ref|YP_977762.1| - 8.7e-16 57.9 0.3 1.3e-15 57.3 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF402) UvrB_inter PF17757.1 gi|121637540|ref|YP_977763.1| - 3.6e-33 113.6 0.0 2.1e-32 111.1 0.0 2.2 2 0 0 2 2 2 1 UvrB interaction domain UvrB PF12344.8 gi|121637540|ref|YP_977763.1| - 4e-22 77.8 1.8 4e-22 77.8 1.8 1.9 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|121637540|ref|YP_977763.1| - 7.3e-17 61.7 0.1 1.6e-16 60.7 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|121637540|ref|YP_977763.1| - 2.4e-09 37.5 0.0 1.8e-08 34.6 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|121637540|ref|YP_977763.1| - 3.7e-07 29.7 5.1 3.7e-07 29.7 5.1 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.29 gi|121637540|ref|YP_977763.1| - 2.5e-05 24.1 0.0 0.00033 20.5 0.0 2.8 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_19 PF13245.6 gi|121637540|ref|YP_977763.1| - 0.0003 21.2 0.0 0.1 12.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|121637540|ref|YP_977763.1| - 0.00059 19.6 0.0 0.054 13.2 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|121637540|ref|YP_977763.1| - 0.0013 18.8 0.0 0.0097 15.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Helicase_RecD PF05127.14 gi|121637540|ref|YP_977763.1| - 0.0032 17.3 0.0 0.011 15.6 0.0 1.9 2 0 0 2 2 1 1 Helicase AAA_22 PF13401.6 gi|121637540|ref|YP_977763.1| - 0.0034 17.7 0.0 0.066 13.5 0.0 2.7 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 gi|121637540|ref|YP_977763.1| - 0.014 15.5 0.0 0.035 14.2 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|121637540|ref|YP_977763.1| - 0.029 14.8 1.1 0.16 12.3 0.0 2.7 3 1 0 3 3 2 0 AAA ATPase domain ABC_tran PF00005.27 gi|121637540|ref|YP_977763.1| - 0.099 13.2 0.0 1.4 9.4 0.0 2.3 2 0 0 2 2 2 0 ABC transporter AAA_7 PF12775.7 gi|121637540|ref|YP_977763.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AIG1 PF04548.16 gi|121637540|ref|YP_977763.1| - 0.14 11.5 0.0 0.27 10.5 0.0 1.5 1 0 0 1 1 1 0 AIG1 family FtsK_SpoIIIE PF01580.18 gi|121637540|ref|YP_977763.1| - 0.22 10.9 1.2 8.2 5.7 0.0 3.0 3 0 0 3 3 3 0 FtsK/SpoIIIE family CdvA PF18822.1 gi|121637540|ref|YP_977763.1| - 0.75 9.6 4.2 0.8 9.5 0.2 2.8 3 0 0 3 3 3 0 CdvA-like coiled-coil domain MFS_1 PF07690.16 gi|121637541|ref|YP_977764.1| - 4.9e-32 111.2 67.4 5.2e-32 111.1 64.2 2.2 1 1 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 gi|121637541|ref|YP_977764.1| - 0.55 8.5 5.9 4.7 5.4 1.6 2.4 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family PMT_2 PF13231.6 gi|121637542|ref|YP_977765.1| - 6.2e-08 33.0 18.6 6.2e-08 33.0 18.6 2.7 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Sarcoglycan_1 PF04790.13 gi|121637542|ref|YP_977765.1| - 0.82 9.0 1.6 1.6 8.0 1.6 1.4 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein Usp PF00582.26 gi|121637543|ref|YP_977766.1| - 4.8e-25 88.7 3.8 5.8e-25 88.4 3.8 1.1 1 0 0 1 1 1 1 Universal stress protein family Binary_toxB_2 PF17475.2 gi|121637543|ref|YP_977766.1| - 0.089 12.5 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA domain 2 Lactamase_B PF00753.27 gi|121637544|ref|YP_977767.1| - 3.3e-10 40.3 5.5 6.1e-10 39.4 5.5 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121637544|ref|YP_977767.1| - 0.00025 20.6 1.9 0.00065 19.3 1.9 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 gi|121637544|ref|YP_977767.1| - 0.00036 20.1 0.0 0.00052 19.6 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|121637544|ref|YP_977767.1| - 0.017 15.0 0.6 0.053 13.4 0.6 1.9 1 1 0 1 1 1 0 Beta-lactamase superfamily domain UvrA_inter PF17760.1 gi|121637545|ref|YP_977768.1| - 5e-41 139.2 0.1 1.4e-40 137.7 0.0 1.8 2 0 0 2 2 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|121637545|ref|YP_977768.1| - 3.5e-35 120.7 0.0 1.2e-32 112.6 0.0 3.5 4 0 0 4 4 3 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|121637545|ref|YP_977768.1| - 2e-17 64.0 0.0 1.1e-08 35.7 0.0 4.4 3 1 0 3 3 3 3 ABC transporter AAA_16 PF13191.6 gi|121637545|ref|YP_977768.1| - 3.1e-08 34.2 0.3 0.013 15.9 0.0 3.0 3 0 0 3 3 2 2 AAA ATPase domain SMC_N PF02463.19 gi|121637545|ref|YP_977768.1| - 7.2e-08 32.1 0.0 0.7 9.3 0.0 4.1 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121637545|ref|YP_977768.1| - 1.5e-07 31.1 0.1 0.0021 17.8 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|121637545|ref|YP_977768.1| - 1.7e-06 28.1 0.9 0.04 13.7 0.0 4.0 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|121637545|ref|YP_977768.1| - 1.5e-05 24.7 0.7 0.075 12.6 0.0 3.0 4 0 0 4 4 2 2 AAA domain RsgA_GTPase PF03193.16 gi|121637545|ref|YP_977768.1| - 2.6e-05 24.2 0.2 0.066 13.1 0.2 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_33 PF13671.6 gi|121637545|ref|YP_977768.1| - 0.00019 21.6 0.4 1 9.5 0.0 3.3 4 0 0 4 4 3 2 AAA domain DUF2083 PF09856.9 gi|121637545|ref|YP_977768.1| - 0.00052 19.9 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 Predicted transcriptional regulator (DUF2083) APS_kinase PF01583.20 gi|121637545|ref|YP_977768.1| - 0.00053 19.9 0.1 0.51 10.2 0.0 2.7 2 0 0 2 2 2 2 Adenylylsulphate kinase AAA_23 PF13476.6 gi|121637545|ref|YP_977768.1| - 0.00069 20.2 0.0 1.3 9.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|121637545|ref|YP_977768.1| - 0.0038 17.8 0.0 3 8.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|121637545|ref|YP_977768.1| - 0.0044 17.3 0.0 2.6 8.3 0.0 3.2 3 0 0 3 3 3 1 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|121637545|ref|YP_977768.1| - 0.005 17.2 4.8 0.21 12.0 0.3 3.8 4 0 0 4 4 4 1 DnaJ central domain NACHT PF05729.12 gi|121637545|ref|YP_977768.1| - 0.016 15.2 0.0 0.61 10.0 0.0 2.4 2 0 0 2 2 2 0 NACHT domain cobW PF02492.19 gi|121637545|ref|YP_977768.1| - 0.033 13.8 1.9 0.41 10.2 0.1 2.6 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain Viral_helicase1 PF01443.18 gi|121637545|ref|YP_977768.1| - 0.05 13.3 0.0 0.5 10.1 0.1 2.4 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 gi|121637545|ref|YP_977768.1| - 0.067 13.6 0.0 3.5 8.1 0.0 2.4 2 0 0 2 2 2 0 RNA helicase AAA_15 PF13175.6 gi|121637545|ref|YP_977768.1| - 0.084 12.6 0.0 30 4.2 0.0 3.3 4 0 0 4 4 4 0 AAA ATPase domain DUF1421 PF07223.11 gi|121637545|ref|YP_977768.1| - 0.086 12.7 0.0 0.24 11.2 0.0 1.9 1 0 0 1 1 1 0 UBA-like domain (DUF1421) MMR_HSR1 PF01926.23 gi|121637545|ref|YP_977768.1| - 0.089 12.9 0.6 3.8 7.6 0.1 2.8 3 0 0 3 3 2 0 50S ribosome-binding GTPase T2SSE PF00437.20 gi|121637545|ref|YP_977768.1| - 0.12 11.4 0.1 3.9 6.4 0.1 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF2075 PF09848.9 gi|121637545|ref|YP_977768.1| - 0.27 10.4 0.1 5.6 6.1 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Zn-ribbon_8 PF09723.10 gi|121637545|ref|YP_977768.1| - 0.29 11.3 10.9 2.1 8.5 0.0 4.7 4 1 1 5 5 5 0 Zinc ribbon domain Esterase PF00756.20 gi|121637547|ref|YP_977770.1| - 5.4e-11 42.6 0.0 9.5e-11 41.8 0.0 1.4 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 gi|121637547|ref|YP_977770.1| - 0.016 14.7 0.1 0.037 13.5 0.1 1.6 2 0 0 2 2 2 0 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121637547|ref|YP_977770.1| - 0.096 11.9 0.0 0.19 10.9 0.0 1.5 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF4131 PF13567.6 gi|121637547|ref|YP_977770.1| - 6.8 6.3 17.3 6 6.5 7.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2156 PF09924.9 gi|121637548|ref|YP_977771.1| - 1.1e-102 343.1 0.0 1.5e-102 342.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) tRNA-synt_2_TM PF16995.5 gi|121637548|ref|YP_977771.1| - 1.1e-80 270.4 23.7 2e-80 269.6 23.7 1.4 1 0 0 1 1 1 1 Transmembrane region of lysyl-tRNA synthetase tRNA-synt_2 PF00152.20 gi|121637548|ref|YP_977771.1| - 3.1e-66 223.6 0.0 4.3e-66 223.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|121637548|ref|YP_977771.1| - 1.2e-11 44.4 0.0 2.5e-11 43.4 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|121637548|ref|YP_977771.1| - 0.0022 17.5 0.0 0.33 10.4 0.0 2.4 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) BOF PF04076.13 gi|121637548|ref|YP_977771.1| - 0.054 13.6 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial OB fold (BOF) protein Peptidase_U4 PF03419.13 gi|121637548|ref|YP_977771.1| - 2.2 7.5 4.9 3.5 6.8 4.9 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA MFS_MOT1 PF16983.5 gi|121637548|ref|YP_977771.1| - 6.8 7.1 8.0 41 4.6 7.9 2.5 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily IF3_C PF00707.22 gi|121637549|ref|YP_977772.1| - 2.9e-32 110.5 0.1 4.2e-32 110.0 0.1 1.2 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain IF3_N PF05198.16 gi|121637549|ref|YP_977772.1| - 1.9e-29 101.7 0.1 3.3e-29 100.9 0.1 1.4 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain Wzt_C PF14524.6 gi|121637549|ref|YP_977772.1| - 0.19 11.8 0.0 0.83 9.7 0.0 1.8 2 0 0 2 2 2 0 Wzt C-terminal domain Ribosomal_L35p PF01632.19 gi|121637550|ref|YP_977773.1| - 7e-24 84.1 6.1 7.6e-24 84.0 6.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35 Ribosomal_L20 PF00453.18 gi|121637551|ref|YP_977774.1| - 8.9e-42 141.5 8.8 1e-41 141.3 8.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L20 SpoU_methylase PF00588.19 gi|121637552|ref|YP_977775.1| - 2.4e-37 128.2 0.1 5.7e-37 127.0 0.0 1.6 2 0 0 2 2 2 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 gi|121637552|ref|YP_977775.1| - 4.7e-08 33.2 0.1 9.1e-08 32.3 0.1 1.4 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding PA PF02225.22 gi|121637552|ref|YP_977775.1| - 0.034 14.2 0.9 0.059 13.4 0.9 1.5 1 0 0 1 1 1 0 PA domain DUF2236 PF09995.9 gi|121637553|ref|YP_977776.1| - 7.4e-53 180.1 1.6 7.4e-53 180.1 1.6 1.5 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2236) PE PF00934.20 gi|121637554|ref|YP_977777.1| - 2.5e-29 101.4 16.7 5.6e-29 100.3 16.7 1.6 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121637554|ref|YP_977777.1| - 1.9 9.0 9.6 5.1 7.6 9.6 1.8 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Guanylate_cyc PF00211.20 gi|121637555|ref|YP_977778.1| - 6.5e-12 45.4 0.0 1.2e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain GGDEF PF00990.21 gi|121637555|ref|YP_977778.1| - 0.042 13.6 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Diguanylate cyclase, GGDEF domain PAP2_C PF14360.6 gi|121637556|ref|YP_977779.1| - 0.18 12.4 0.5 0.18 12.4 0.5 2.4 3 0 0 3 3 3 0 PAP2 superfamily C-terminal tRNA-synt_2d PF01409.20 gi|121637557|ref|YP_977780.1| - 4.4e-96 321.1 0.0 5.3e-96 320.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Phe_tRNA-synt_N PF02912.18 gi|121637557|ref|YP_977780.1| - 2.2e-15 56.3 0.7 4.1e-15 55.5 0.7 1.4 1 0 0 1 1 1 1 Aminoacyl tRNA synthetase class II, N-terminal domain tRNA_synthFbeta PF17759.1 gi|121637557|ref|YP_977780.1| - 0.024 14.1 0.0 0.31 10.4 0.0 2.2 1 1 0 1 1 1 0 Phenylalanyl tRNA synthetase beta chain CLM domain LpqV PF17301.2 gi|121637557|ref|YP_977780.1| - 0.12 12.6 0.1 3.1 8.1 0.0 2.3 2 0 0 2 2 2 0 Putative lipoprotein LpqV B3_4 PF03483.17 gi|121637558|ref|YP_977781.1| - 1.4e-56 190.9 0.0 2.1e-56 190.3 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA_synthFbeta PF17759.1 gi|121637558|ref|YP_977781.1| - 1.2e-51 175.3 0.0 1.6e-51 174.8 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain FDX-ACB PF03147.14 gi|121637558|ref|YP_977781.1| - 9.1e-25 86.9 0.0 1.5e-24 86.2 0.0 1.4 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain tRNA_bind PF01588.20 gi|121637558|ref|YP_977781.1| - 1e-19 70.4 0.0 1.7e-19 69.7 0.0 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain B5 PF03484.15 gi|121637558|ref|YP_977781.1| - 1.3e-15 57.4 0.0 1e-14 54.6 0.0 2.4 2 0 0 2 2 2 1 tRNA synthetase B5 domain PE PF00934.20 gi|121637559|ref|YP_977782.1| - 3.8e-30 104.1 15.4 3.8e-30 104.1 15.4 3.1 3 0 0 3 3 3 1 PE family Semialdhyde_dhC PF02774.18 gi|121637560|ref|YP_977783.1| - 4e-26 92.2 0.0 7.7e-26 91.3 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|121637560|ref|YP_977783.1| - 3e-20 72.8 0.0 5.9e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain ArgJ PF01960.18 gi|121637561|ref|YP_977784.1| - 2.3e-127 424.8 6.0 2.6e-127 424.6 6.0 1.0 1 0 0 1 1 1 1 ArgJ family FlgT_N PF16548.5 gi|121637561|ref|YP_977784.1| - 0.7 10.5 3.7 17 6.0 0.1 3.4 3 0 0 3 3 3 0 Flagellar assembly protein T, N-terminal domain AA_kinase PF00696.28 gi|121637562|ref|YP_977785.1| - 8e-47 159.9 1.4 9.4e-47 159.6 1.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family Aminotran_3 PF00202.21 gi|121637563|ref|YP_977786.1| - 2.3e-105 352.6 0.1 2.7e-105 352.3 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|121637563|ref|YP_977786.1| - 0.0011 18.3 0.1 0.002 17.5 0.1 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|121637563|ref|YP_977786.1| - 0.0044 16.0 0.0 0.013 14.5 0.0 1.7 2 1 0 2 2 2 1 Aminotransferase class-V OTCace PF00185.24 gi|121637564|ref|YP_977787.1| - 1.9e-52 177.5 0.0 3e-52 176.8 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|121637564|ref|YP_977787.1| - 1.2e-47 161.6 0.0 1.9e-47 161.0 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Arg_repressor PF01316.21 gi|121637565|ref|YP_977788.1| - 1.8e-26 91.7 0.0 2.4e-26 91.3 0.0 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain Arg_repressor_C PF02863.18 gi|121637565|ref|YP_977788.1| - 1.5e-24 85.6 0.0 2.4e-24 85.0 0.0 1.3 1 0 0 1 1 1 1 Arginine repressor, C-terminal domain HTH_20 PF12840.7 gi|121637565|ref|YP_977788.1| - 0.0059 16.6 0.3 0.013 15.5 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain AA_kinase PF00696.28 gi|121637565|ref|YP_977788.1| - 0.043 13.4 0.2 0.066 12.8 0.2 1.2 1 0 0 1 1 1 0 Amino acid kinase family Type2_restr_D3 PF16902.5 gi|121637565|ref|YP_977788.1| - 0.092 12.7 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain Arginosuc_synth PF00764.19 gi|121637566|ref|YP_977789.1| - 1.9e-185 616.8 0.0 2.1e-185 616.5 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|121637566|ref|YP_977789.1| - 0.039 13.5 0.0 0.062 12.8 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Lyase_1 PF00206.20 gi|121637567|ref|YP_977790.1| - 4.7e-59 200.3 0.0 7.4e-59 199.7 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|121637567|ref|YP_977790.1| - 4.1e-24 85.1 0.2 3.4e-23 82.2 0.1 2.5 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Chal_sti_synt_N PF00195.19 gi|121637568|ref|YP_977791.1| - 4.2e-20 72.1 0.0 7.3e-20 71.4 0.0 1.3 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain Chal_sti_synt_C PF02797.15 gi|121637568|ref|YP_977791.1| - 7.3e-17 61.8 0.0 1.3e-16 60.9 0.0 1.4 1 0 0 1 1 1 1 Chalcone and stilbene synthases, C-terminal domain FAE1_CUT1_RppA PF08392.12 gi|121637568|ref|YP_977791.1| - 1e-14 54.5 0.0 2.6e-14 53.2 0.0 1.6 2 0 0 2 2 2 1 FAE1/Type III polyketide synthase-like protein ACP_syn_III_C PF08541.10 gi|121637568|ref|YP_977791.1| - 9.5e-10 38.5 0.0 5.6e-08 32.8 0.0 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Acyl_transf_1 PF00698.21 gi|121637569|ref|YP_977792.1| - 1.1e-92 310.9 0.2 2e-92 310.1 0.2 1.4 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121637569|ref|YP_977792.1| - 2.2e-91 306.0 1.0 7.2e-91 304.3 1.0 2.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121637569|ref|YP_977792.1| - 2.9e-59 200.0 1.7 2.9e-59 200.0 1.7 3.3 3 0 0 3 3 3 1 KR domain PS-DH PF14765.6 gi|121637569|ref|YP_977792.1| - 2.5e-52 178.0 3.6 7.9e-52 176.3 3.6 1.9 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121637569|ref|YP_977792.1| - 9.8e-43 144.9 0.6 3e-42 143.3 0.6 1.9 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N_2 PF13602.6 gi|121637569|ref|YP_977792.1| - 2.2e-19 70.8 0.4 1.3e-16 61.8 0.1 3.4 2 0 0 2 2 2 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121637569|ref|YP_977792.1| - 2.9e-16 59.9 0.0 5.9e-15 55.7 0.0 2.5 2 0 0 2 2 2 1 Ketoacyl-synthetase C-terminal extension ADH_zinc_N PF00107.26 gi|121637569|ref|YP_977792.1| - 1.1e-13 51.2 0.2 6.1e-12 45.6 0.0 3.5 3 0 0 3 3 3 1 Zinc-binding dehydrogenase PP-binding PF00550.25 gi|121637569|ref|YP_977792.1| - 8.8e-13 48.4 0.1 2.5e-12 47.0 0.1 1.9 1 0 0 1 1 1 1 Phosphopantetheine attachment site adh_short PF00106.25 gi|121637569|ref|YP_977792.1| - 1.3e-11 44.4 6.5 2.2e-11 43.6 0.3 3.1 3 0 0 3 3 3 1 short chain dehydrogenase PikAIV_N PF18605.1 gi|121637569|ref|YP_977792.1| - 8.4e-09 34.9 5.4 8.4e-09 34.9 5.4 2.0 2 0 0 2 2 2 1 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Epimerase PF01370.21 gi|121637569|ref|YP_977792.1| - 1e-07 31.7 0.2 1.9e-07 30.8 0.2 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Thiolase_N PF00108.23 gi|121637569|ref|YP_977792.1| - 1.8e-06 27.5 1.5 3.6e-06 26.6 0.2 2.1 3 0 0 3 3 3 1 Thiolase, N-terminal domain Sacchrp_dh_NADP PF03435.18 gi|121637569|ref|YP_977792.1| - 3.4e-05 24.1 0.4 0.0001 22.6 0.4 1.9 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ADH_N PF08240.12 gi|121637569|ref|YP_977792.1| - 5.5e-05 23.0 2.6 0.00014 21.7 2.6 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Polysacc_synt_2 PF02719.15 gi|121637569|ref|YP_977792.1| - 0.00016 20.9 0.0 0.00028 20.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|121637569|ref|YP_977792.1| - 0.0011 18.5 0.0 0.0017 17.9 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121637569|ref|YP_977792.1| - 0.0073 15.3 0.0 0.012 14.7 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family SAT PF16073.5 gi|121637569|ref|YP_977792.1| - 0.12 12.0 1.0 12 5.5 1.9 2.6 1 1 1 2 2 2 0 Starter unit:ACP transacylase in aflatoxin biosynthesis MoCF_biosynth PF00994.24 gi|121637569|ref|YP_977792.1| - 0.26 11.0 2.6 1.9 8.2 0.2 2.7 2 0 0 2 2 2 0 Probable molybdopterin binding domain ketoacyl-synt PF00109.26 gi|121637570|ref|YP_977793.1| - 6.2e-91 304.5 1.1 1.5e-90 303.2 1.1 1.7 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121637570|ref|YP_977793.1| - 2.3e-58 198.2 1.3 3.7e-58 197.5 1.3 1.3 1 0 0 1 1 1 1 Acyl transferase domain PS-DH PF14765.6 gi|121637570|ref|YP_977793.1| - 3.8e-52 177.4 5.6 7.6e-52 176.4 5.6 1.5 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121637570|ref|YP_977793.1| - 8.3e-43 145.2 0.5 2.5e-42 143.6 0.5 1.9 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 gi|121637570|ref|YP_977793.1| - 8.2e-14 52.0 0.0 3.3e-13 50.1 0.0 2.0 2 0 0 2 2 2 1 Ketoacyl-synthetase C-terminal extension ADH_zinc_N PF00107.26 gi|121637570|ref|YP_977793.1| - 1.8e-12 47.4 0.0 6e-12 45.7 0.0 2.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Thiolase_N PF00108.23 gi|121637570|ref|YP_977793.1| - 5.5e-08 32.5 0.1 4.7e-07 29.4 0.2 2.3 2 0 0 2 2 2 1 Thiolase, N-terminal domain ADH_zinc_N_2 PF13602.6 gi|121637570|ref|YP_977793.1| - 3.4e-07 31.4 0.0 2.4e-06 28.6 0.0 2.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Docking PF08990.11 gi|121637570|ref|YP_977793.1| - 4.8e-07 29.3 7.3 1.1e-06 28.1 7.3 1.6 1 0 0 1 1 1 1 Erythronolide synthase docking ADH_N PF08240.12 gi|121637570|ref|YP_977793.1| - 1.4e-06 28.1 0.3 4.3e-06 26.6 0.3 1.8 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain KR PF08659.10 gi|121637571|ref|YP_977794.1| - 8.7e-59 198.4 3.8 1.4e-58 197.8 3.8 1.3 1 0 0 1 1 1 1 KR domain PP-binding PF00550.25 gi|121637571|ref|YP_977794.1| - 2.3e-14 53.5 0.0 5.1e-14 52.4 0.0 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site adh_short PF00106.25 gi|121637571|ref|YP_977794.1| - 1.6e-12 47.3 1.1 2.9e-12 46.4 1.1 1.4 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 gi|121637571|ref|YP_977794.1| - 2.7e-12 46.7 0.4 4.2e-12 46.1 0.4 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family adh_short_C2 PF13561.6 gi|121637571|ref|YP_977794.1| - 2.7e-09 36.9 1.6 5.1e-09 36.0 1.6 1.4 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 gi|121637571|ref|YP_977794.1| - 7.4e-08 31.9 0.1 1.1e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|121637571|ref|YP_977794.1| - 3.7e-07 29.8 0.0 5.5e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121637571|ref|YP_977794.1| - 7.3e-06 25.2 0.1 1.1e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family ADH_zinc_N_2 PF13602.6 gi|121637571|ref|YP_977794.1| - 1.1e-05 26.5 0.3 3.9e-05 24.7 0.1 2.1 2 0 0 2 2 1 1 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 gi|121637571|ref|YP_977794.1| - 0.00045 20.2 4.2 0.00081 19.3 4.2 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Shikimate_DH PF01488.20 gi|121637571|ref|YP_977794.1| - 0.0038 17.3 0.3 0.019 15.0 0.2 2.0 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_4 PF07993.12 gi|121637571|ref|YP_977794.1| - 0.0081 15.4 0.6 0.084 12.0 0.4 2.5 2 2 1 3 3 3 1 Male sterility protein PAC4 PF16093.5 gi|121637571|ref|YP_977794.1| - 0.14 12.4 0.0 0.4 10.9 0.0 1.8 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Tnp_DNA_bind PF14706.6 gi|121637571|ref|YP_977794.1| - 0.14 12.0 0.4 9.6 6.1 0.0 3.1 3 0 0 3 3 3 0 Transposase DNA-binding PDH PF02153.17 gi|121637571|ref|YP_977794.1| - 0.18 10.8 0.2 0.35 9.8 0.2 1.4 1 0 0 1 1 1 0 Prephenate dehydrogenase Acyl_transf_1 PF00698.21 gi|121637572|ref|YP_977795.1| - 1.3e-63 215.4 3.0 2e-63 214.8 3.0 1.2 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121637572|ref|YP_977795.1| - 5.8e-62 209.6 0.3 4.4e-59 200.1 0.3 2.8 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|121637572|ref|YP_977795.1| - 6.8e-39 132.5 1.8 1.5e-38 131.4 1.8 1.7 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 gi|121637572|ref|YP_977795.1| - 2.6e-14 53.6 0.0 5.4e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121637572|ref|YP_977795.1| - 2.4e-07 31.0 0.0 9.9e-07 29.0 0.0 2.2 2 0 0 2 2 2 1 Phosphopantetheine attachment site Thiolase_N PF00108.23 gi|121637572|ref|YP_977795.1| - 0.0001 21.7 0.5 0.00038 19.9 0.1 1.9 2 0 0 2 2 2 1 Thiolase, N-terminal domain Chal_sti_synt_N PF00195.19 gi|121637573|ref|YP_977796.1| - 9.5e-22 77.5 0.0 1.4e-21 77.0 0.0 1.2 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain Chal_sti_synt_C PF02797.15 gi|121637573|ref|YP_977796.1| - 7.6e-17 61.7 0.0 1.3e-16 61.0 0.0 1.4 1 0 0 1 1 1 1 Chalcone and stilbene synthases, C-terminal domain FAE1_CUT1_RppA PF08392.12 gi|121637573|ref|YP_977796.1| - 1.7e-14 53.8 0.0 2.4e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein ACP_syn_III_C PF08541.10 gi|121637573|ref|YP_977796.1| - 9.2e-12 45.0 0.0 2.4e-10 40.4 0.0 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Thiolase_N PF00108.23 gi|121637573|ref|YP_977796.1| - 0.026 13.9 0.0 0.055 12.8 0.0 1.4 1 1 0 1 1 1 0 Thiolase, N-terminal domain p450 PF00067.22 gi|121637574|ref|YP_977797.1| - 1.8e-62 211.6 0.0 2.3e-62 211.3 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ABC_tran PF00005.27 gi|121637575|ref|YP_977798.1| - 2.2e-47 161.0 0.0 4.5e-22 79.0 0.0 2.9 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|121637575|ref|YP_977798.1| - 1.6e-12 47.9 12.9 0.00079 19.3 0.2 4.2 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121637575|ref|YP_977798.1| - 8.4e-07 28.6 0.5 5.5 6.4 0.4 4.1 3 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain ABC_tran_CTD PF16326.5 gi|121637575|ref|YP_977798.1| - 2.8e-06 27.5 2.0 2.8e-06 27.5 2.0 2.2 2 0 0 2 2 2 1 ABC transporter C-terminal domain MMR_HSR1 PF01926.23 gi|121637575|ref|YP_977798.1| - 4.4e-06 26.7 0.1 0.14 12.3 0.0 2.7 2 0 0 2 2 2 2 50S ribosome-binding GTPase ABC_tran_Xtn PF12848.7 gi|121637575|ref|YP_977798.1| - 6.9e-06 26.0 0.0 2.4e-05 24.3 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.6 gi|121637575|ref|YP_977798.1| - 3.2e-05 23.6 1.1 0.042 13.6 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121637575|ref|YP_977798.1| - 7.6e-05 23.3 0.7 0.054 14.0 0.1 2.6 2 1 0 2 2 2 2 AAA domain MeaB PF03308.16 gi|121637575|ref|YP_977798.1| - 0.00017 20.7 2.4 0.019 13.9 0.3 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 gi|121637575|ref|YP_977798.1| - 0.00028 20.8 0.5 0.43 10.5 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase DUF87 PF01935.17 gi|121637575|ref|YP_977798.1| - 0.0056 16.8 1.6 0.24 11.4 0.2 2.5 2 1 0 2 2 2 1 Helicase HerA, central domain Dynamin_N PF00350.23 gi|121637575|ref|YP_977798.1| - 0.012 15.7 0.6 3.3 7.7 0.0 2.5 2 0 0 2 2 2 0 Dynamin family AAA_15 PF13175.6 gi|121637575|ref|YP_977798.1| - 0.04 13.6 0.1 8.5 6.0 0.2 2.6 3 0 0 3 3 3 0 AAA ATPase domain GTP_EFTU PF00009.27 gi|121637575|ref|YP_977798.1| - 0.17 11.4 0.1 15 5.1 0.0 2.2 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain FOXP-CC PF16159.5 gi|121637575|ref|YP_977798.1| - 0.17 12.5 1.5 0.35 11.5 0.9 1.9 1 1 0 1 1 1 0 FOXP coiled-coil domain AAA_16 PF13191.6 gi|121637575|ref|YP_977798.1| - 0.3 11.5 9.6 0.1 13.0 0.4 3.1 3 1 1 4 4 4 0 AAA ATPase domain NACHT PF05729.12 gi|121637575|ref|YP_977798.1| - 1.4 8.8 4.3 7.2 6.5 0.6 2.8 3 0 0 3 3 3 0 NACHT domain SlyX PF04102.12 gi|121637575|ref|YP_977798.1| - 2.1 9.0 4.5 60 4.4 1.1 3.3 1 1 1 2 2 2 0 SlyX AAA_28 PF13521.6 gi|121637575|ref|YP_977798.1| - 2.4 8.4 5.8 1.5 9.0 0.3 3.3 3 1 0 3 3 3 0 AAA domain NTP_transf_9 PF04248.12 gi|121637577|ref|YP_977800.1| - 2.6e-29 100.9 0.0 3.1e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF427) MerT PF02411.15 gi|121637578|ref|YP_977801.1| - 0.054 13.5 6.6 0.069 13.2 6.6 1.2 1 0 0 1 1 1 0 MerT mercuric transport protein MFS_1 PF07690.16 gi|121637579|ref|YP_977802.1| - 6e-35 120.8 49.6 3.9e-32 111.6 41.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|121637579|ref|YP_977802.1| - 1.3e-05 24.6 43.6 8.3e-05 22.0 43.6 1.8 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Transglut_core PF01841.19 gi|121637580|ref|YP_977803.1| - 4.3e-25 88.4 0.0 7.1e-25 87.6 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily Rhodanese PF00581.20 gi|121637581|ref|YP_977804.1| - 6e-13 49.3 0.0 9e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain HTH_5 PF01022.20 gi|121637581|ref|YP_977804.1| - 6.6e-09 35.5 1.3 1.5e-08 34.4 0.2 2.2 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121637581|ref|YP_977804.1| - 9.3e-09 35.2 5.7 2.4e-08 33.9 1.5 2.9 3 0 0 3 3 3 1 Helix-turn-helix domain DprA_WH PF17782.1 gi|121637581|ref|YP_977804.1| - 1.4e-05 25.1 6.3 1.8e-05 24.7 1.8 2.7 3 0 0 3 3 3 1 DprA winged helix domain TrmB PF01978.19 gi|121637581|ref|YP_977804.1| - 0.00022 21.1 0.0 0.00071 19.4 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|121637581|ref|YP_977804.1| - 0.0022 17.9 3.7 0.0079 16.1 1.8 2.5 3 0 0 3 3 3 1 MarR family Rrf2 PF02082.20 gi|121637581|ref|YP_977804.1| - 0.004 17.5 0.0 0.0095 16.3 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator PaaX PF07848.12 gi|121637581|ref|YP_977804.1| - 0.028 14.7 0.0 0.087 13.1 0.0 1.8 1 0 0 1 1 1 0 PaaX-like protein MarR PF01047.22 gi|121637581|ref|YP_977804.1| - 0.033 14.1 0.1 0.085 12.8 0.0 1.6 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 gi|121637581|ref|YP_977804.1| - 0.049 13.6 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|121637581|ref|YP_977804.1| - 0.058 13.9 0.1 0.12 12.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|121637581|ref|YP_977804.1| - 0.063 12.8 0.1 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|121637581|ref|YP_977804.1| - 0.08 12.7 4.1 0.1 12.4 2.7 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain FtsK_gamma PF09397.10 gi|121637581|ref|YP_977804.1| - 0.15 11.8 0.7 2.7 7.8 0.1 2.3 2 0 0 2 2 2 0 Ftsk gamma domain cNMP_binding PF00027.29 gi|121637582|ref|YP_977805.1| - 1.4e-18 66.7 0.0 2.2e-18 66.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 gi|121637582|ref|YP_977805.1| - 1.4e-11 44.2 1.1 1.4e-11 44.2 1.1 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|121637582|ref|YP_977805.1| - 0.0013 18.6 0.5 0.0013 18.6 0.5 3.2 4 0 0 4 4 4 1 MarR family HTH_37 PF13744.6 gi|121637582|ref|YP_977805.1| - 0.032 14.2 0.2 0.08 12.9 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|121637582|ref|YP_977805.1| - 0.042 13.5 0.1 0.16 11.6 0.2 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_29 PF13551.6 gi|121637582|ref|YP_977805.1| - 0.061 13.4 0.0 0.24 11.5 0.0 2.0 1 0 0 1 1 1 0 Winged helix-turn helix ParBc PF02195.18 gi|121637582|ref|YP_977805.1| - 0.11 12.8 0.0 0.32 11.3 0.0 1.7 1 0 0 1 1 1 0 ParB-like nuclease domain AhpC-TSA PF00578.21 gi|121637583|ref|YP_977806.1| - 8.1e-08 32.2 0.0 1.7e-07 31.2 0.0 1.6 1 1 0 1 1 1 1 AhpC/TSA family AhpC-TSA_2 PF13911.6 gi|121637583|ref|YP_977806.1| - 2.5e-05 24.4 0.0 4.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme Redoxin PF08534.10 gi|121637583|ref|YP_977806.1| - 0.00024 20.9 0.0 0.01 15.6 0.0 2.3 2 0 0 2 2 2 1 Redoxin AhpC-TSA PF00578.21 gi|121637584|ref|YP_977807.1| - 4.7e-14 52.4 0.0 5.9e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121637584|ref|YP_977807.1| - 1.3e-10 41.2 0.0 1.7e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin PF00085.20 gi|121637584|ref|YP_977807.1| - 7.4e-08 32.3 0.0 6.9e-06 26.0 0.1 2.2 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 gi|121637584|ref|YP_977807.1| - 2e-06 28.2 0.0 3.4e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|121637584|ref|YP_977807.1| - 4.4e-06 26.9 0.0 6.1e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 gi|121637584|ref|YP_977807.1| - 1.3e-05 25.2 0.0 5.5e-05 23.1 0.0 1.9 1 1 0 1 1 1 1 F plasmid transfer operon protein LMF1 PF06762.14 gi|121637585|ref|YP_977808.1| - 2 7.4 4.2 3.2 6.8 4.2 1.6 1 1 0 1 1 1 0 Lipase maturation factor Acyl-CoA_dh_1 PF00441.24 gi|121637586|ref|YP_977809.1| - 7.4e-15 55.4 1.1 1.4e-14 54.5 1.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121637586|ref|YP_977809.1| - 5.9e-12 45.6 0.0 1.4e-11 44.4 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121637586|ref|YP_977809.1| - 6e-12 46.0 5.0 6e-12 46.0 5.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121637586|ref|YP_977809.1| - 9.9e-10 39.1 2.0 1.8e-09 38.3 0.4 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain HpaB_N PF11794.8 gi|121637586|ref|YP_977809.1| - 0.14 11.8 0.1 0.23 11.1 0.1 1.2 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal Phosphonate-bd PF12974.7 gi|121637587|ref|YP_977810.1| - 4.3e-30 105.1 0.0 5.4e-30 104.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 gi|121637587|ref|YP_977810.1| - 0.0028 17.6 0.1 0.021 14.8 0.1 2.3 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|121637587|ref|YP_977810.1| - 0.052 13.0 0.0 0.23 10.9 0.0 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 ERG2_Sigma1R PF04622.12 gi|121637587|ref|YP_977810.1| - 0.14 11.4 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein Radical_SAM PF04055.21 gi|121637588|ref|YP_977811.1| - 7.3e-20 72.0 0.0 1.2e-19 71.3 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121637588|ref|YP_977811.1| - 5.2e-07 30.0 0.0 8e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|121637588|ref|YP_977811.1| - 0.0074 16.4 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain DivIVA PF05103.13 gi|121637589|ref|YP_977812.1| - 3.1e-06 27.3 7.2 3.1e-06 27.3 7.2 3.3 1 1 2 3 3 3 1 DivIVA protein DivIC PF04977.15 gi|121637589|ref|YP_977812.1| - 0.012 15.4 0.2 0.012 15.4 0.2 4.2 3 1 0 3 3 3 0 Septum formation initiator TSC22 PF01166.18 gi|121637589|ref|YP_977812.1| - 0.051 13.9 2.8 1.9 8.9 0.0 3.5 2 1 0 2 2 2 0 TSC-22/dip/bun family zf-C4H2 PF10146.9 gi|121637589|ref|YP_977812.1| - 0.051 13.9 1.0 0.051 13.9 1.0 2.8 1 1 1 2 2 2 0 Zinc finger-containing protein HIP1_clath_bdg PF16515.5 gi|121637589|ref|YP_977812.1| - 0.14 12.7 30.8 1.3 9.7 0.3 4.5 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 IZUMO PF15005.6 gi|121637589|ref|YP_977812.1| - 0.48 10.9 10.0 0.99 9.9 0.9 3.0 2 1 1 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated DUF948 PF06103.11 gi|121637589|ref|YP_977812.1| - 2.1 8.7 5.0 6.8 7.0 0.1 3.4 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Gp-FAR-1 PF05823.12 gi|121637589|ref|YP_977812.1| - 2.1 8.7 10.7 1.6 9.0 4.0 2.9 2 2 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) SOAR PF16533.5 gi|121637589|ref|YP_977812.1| - 7.4 6.6 20.3 15 5.7 7.2 4.0 1 1 2 3 3 3 0 STIM1 Orai1-activating region AMP-binding PF00501.28 gi|121637590|ref|YP_977813.1| - 3e-28 98.6 0.0 4.8e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme Abhydrolase_6 PF12697.7 gi|121637590|ref|YP_977813.1| - 1.2e-07 32.5 5.0 1.2e-07 32.5 5.0 3.4 1 1 1 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121637590|ref|YP_977813.1| - 2.4e-07 30.7 0.0 5.3e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 alpha/beta hydrolase fold Palm_thioest PF02089.15 gi|121637590|ref|YP_977813.1| - 0.00093 19.1 0.0 0.0016 18.4 0.0 1.4 1 0 0 1 1 1 1 Palmitoyl protein thioesterase PHB_depo_C PF06850.11 gi|121637590|ref|YP_977813.1| - 0.0012 18.4 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 PHB de-polymerase C-terminus DUF3141 PF11339.8 gi|121637590|ref|YP_977813.1| - 0.099 11.1 0.1 0.16 10.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Trm112p PF03966.16 gi|121637591|ref|YP_977814.1| - 8.1e-09 35.9 0.2 5.8e-08 33.2 0.2 2.0 1 1 0 1 1 1 1 Trm112p-like protein TetR_C_16 PF17920.1 gi|121637592|ref|YP_977815.1| - 1.3e-25 89.7 0.1 2.4e-25 88.8 0.0 1.5 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637592|ref|YP_977815.1| - 2.4e-16 59.2 1.3 3.6e-16 58.7 1.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family DUF3572 PF12096.8 gi|121637592|ref|YP_977815.1| - 0.089 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3572) ABC2_membrane PF01061.24 gi|121637593|ref|YP_977816.1| - 3.1e-29 101.9 20.0 4.7e-29 101.3 20.0 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|121637593|ref|YP_977816.1| - 6.9e-17 61.6 12.9 6.9e-17 61.6 12.9 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|121637593|ref|YP_977816.1| - 1e-08 34.8 16.1 1.4e-08 34.4 16.1 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|121637593|ref|YP_977816.1| - 0.003 17.6 10.1 0.003 17.6 10.1 2.3 2 1 1 3 3 3 1 ABC-2 family transporter protein DUF5423 PF17461.2 gi|121637593|ref|YP_977816.1| - 0.042 12.7 1.3 0.059 12.2 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5423) PilN PF05137.13 gi|121637593|ref|YP_977816.1| - 0.16 12.2 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) ABC_tran PF00005.27 gi|121637594|ref|YP_977817.1| - 2.8e-30 105.6 0.0 4.2e-30 105.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121637594|ref|YP_977817.1| - 5e-12 46.2 0.0 4.3e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|121637594|ref|YP_977817.1| - 0.0029 17.5 0.2 0.0049 16.8 0.2 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|121637594|ref|YP_977817.1| - 0.0044 17.6 0.1 0.0065 17.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637594|ref|YP_977817.1| - 0.0058 17.0 0.3 0.0082 16.5 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|121637594|ref|YP_977817.1| - 0.006 16.3 0.1 0.012 15.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|121637594|ref|YP_977817.1| - 0.01 16.0 0.0 0.023 14.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|121637594|ref|YP_977817.1| - 0.038 13.4 0.0 2.5 7.5 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|121637594|ref|YP_977817.1| - 0.044 13.2 0.1 0.24 10.7 0.1 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Gln-synt_N_2 PF16952.5 gi|121637594|ref|YP_977817.1| - 0.054 13.3 0.1 0.11 12.3 0.1 1.6 1 1 0 1 1 1 0 Glutamine synthetase N-terminal domain AAA_30 PF13604.6 gi|121637594|ref|YP_977817.1| - 0.074 12.8 0.4 0.22 11.2 0.4 1.8 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|121637594|ref|YP_977817.1| - 0.081 12.5 0.7 0.15 11.7 0.7 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|121637594|ref|YP_977817.1| - 0.1 12.9 1.8 0.29 11.4 0.7 2.4 2 1 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|121637594|ref|YP_977817.1| - 0.13 11.7 0.0 0.26 10.7 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein AAA_19 PF13245.6 gi|121637594|ref|YP_977817.1| - 0.18 12.1 0.6 0.32 11.3 0.6 1.7 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|121637594|ref|YP_977817.1| - 0.19 10.5 0.3 0.28 9.9 0.3 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein MMR_HSR1 PF01926.23 gi|121637594|ref|YP_977817.1| - 0.22 11.6 0.3 0.51 10.4 0.3 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 gi|121637594|ref|YP_977817.1| - 0.28 11.1 0.8 1.1 9.1 0.1 2.1 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea Pur_DNA_glyco PF02245.16 gi|121637595|ref|YP_977818.1| - 2.2e-54 183.5 0.0 2.8e-54 183.2 0.0 1.0 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) tRNA-synt_1b PF00579.25 gi|121637596|ref|YP_977819.1| - 9.4e-82 274.6 0.0 1.2e-81 274.3 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 gi|121637596|ref|YP_977819.1| - 7.7e-05 22.3 0.0 0.00015 21.4 0.0 1.5 1 0 0 1 1 1 1 S4 domain TyrRSs_C PF16714.5 gi|121637596|ref|YP_977819.1| - 0.08 12.8 0.5 1.5 8.6 0.5 2.2 1 1 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain DUF732 PF05305.14 gi|121637597|ref|YP_977820.1| - 3e-20 72.4 1.6 4e-20 72.0 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF732) TPR_16 PF13432.6 gi|121637598|ref|YP_977821.1| - 5.2e-06 27.0 14.7 0.00062 20.4 3.3 3.7 3 1 1 4 4 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|121637598|ref|YP_977821.1| - 8.3e-05 23.0 17.7 0.0045 17.5 0.9 4.1 1 1 4 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|121637598|ref|YP_977821.1| - 0.00018 21.7 14.0 0.039 14.2 0.2 4.1 2 1 1 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|121637598|ref|YP_977821.1| - 0.00034 20.8 0.1 0.3 11.4 0.0 3.0 2 1 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 gi|121637598|ref|YP_977821.1| - 0.00046 20.1 14.2 0.26 11.5 1.4 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_5 PF12688.7 gi|121637598|ref|YP_977821.1| - 0.00046 20.4 1.7 0.0013 19.0 1.7 1.7 1 0 0 1 1 1 1 Tetratrico peptide repeat TPR_15 PF13429.6 gi|121637598|ref|YP_977821.1| - 0.00071 18.9 7.3 0.0024 17.2 7.3 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|121637598|ref|YP_977821.1| - 0.014 15.1 0.3 21 4.9 0.0 3.6 3 0 0 3 3 3 0 TPR repeat TPR_4 PF07721.14 gi|121637598|ref|YP_977821.1| - 0.015 15.9 1.8 0.015 15.9 1.8 5.9 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 gi|121637598|ref|YP_977821.1| - 0.03 14.5 0.2 6.5 7.2 0.3 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|121637598|ref|YP_977821.1| - 0.053 14.4 27.7 0.087 13.7 1.2 5.4 2 1 3 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 gi|121637598|ref|YP_977821.1| - 1.8 8.5 11.7 2 8.4 0.5 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat GNAT_like PF18407.1 gi|121637599|ref|YP_977822.1| - 5.5e-20 71.5 6.0 5.5e-20 71.5 6.0 2.4 2 0 0 2 2 2 1 GCN5-related N-acetyltransferase like domain Hydrolase_6 PF13344.6 gi|121637599|ref|YP_977822.1| - 4.9e-18 65.1 0.1 1.2e-17 63.8 0.0 1.7 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121637599|ref|YP_977822.1| - 2.5e-16 59.5 0.1 6.9e-16 58.1 0.1 1.8 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|121637599|ref|YP_977822.1| - 0.00039 20.8 0.7 0.0006 20.2 0.7 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|121637599|ref|YP_977822.1| - 0.0095 16.0 0.0 0.021 14.9 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase FtsJ PF01728.19 gi|121637601|ref|YP_977824.1| - 1.9e-22 80.3 0.0 2.3e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase S4 PF01479.25 gi|121637601|ref|YP_977824.1| - 1.5e-07 31.0 0.4 4.4e-07 29.5 0.1 2.0 2 0 0 2 2 2 1 S4 domain Methyltransf_11 PF08241.12 gi|121637601|ref|YP_977824.1| - 0.049 14.3 0.0 0.091 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637601|ref|YP_977824.1| - 0.062 14.0 0.0 0.13 13.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NAD_kinase PF01513.21 gi|121637602|ref|YP_977825.1| - 1.3e-77 260.8 0.1 1.5e-77 260.7 0.1 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|121637602|ref|YP_977825.1| - 0.0026 17.4 0.2 0.0065 16.1 0.2 1.7 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain SMC_N PF02463.19 gi|121637603|ref|YP_977826.1| - 7.8e-15 54.9 0.0 1e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|121637603|ref|YP_977826.1| - 1.5e-05 25.6 0.0 2.8e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121637603|ref|YP_977826.1| - 0.00012 22.4 0.4 0.00084 19.6 0.4 2.6 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|121637603|ref|YP_977826.1| - 0.00073 19.4 0.0 0.45 10.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|121637603|ref|YP_977826.1| - 0.052 13.3 0.0 2 8.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Spectrin PF00435.21 gi|121637603|ref|YP_977826.1| - 0.075 13.5 1.2 0.14 12.6 0.1 2.0 2 0 0 2 2 2 0 Spectrin repeat CotJB PF12652.7 gi|121637603|ref|YP_977826.1| - 0.078 13.2 0.0 0.27 11.5 0.0 1.9 2 0 0 2 2 2 0 CotJB protein cobW PF02492.19 gi|121637603|ref|YP_977826.1| - 0.098 12.2 0.2 0.21 11.2 0.2 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 gi|121637603|ref|YP_977826.1| - 0.12 12.1 0.1 0.25 11.1 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TPPK_C PF12555.8 gi|121637604|ref|YP_977827.1| - 6.7e-18 64.5 4.5 1.7e-17 63.2 4.5 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphokinase C terminal TPK_catalytic PF04263.16 gi|121637604|ref|YP_977827.1| - 0.016 15.3 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain MctB PF11382.8 gi|121637605|ref|YP_977828.1| - 2.4e-93 313.2 18.3 2.7e-93 313.1 18.3 1.0 1 0 0 1 1 1 1 Copper transport outer membrane protein, MctB JIP_LZII PF16471.5 gi|121637605|ref|YP_977828.1| - 0.15 12.3 0.1 0.27 11.4 0.1 1.3 1 0 0 1 1 1 0 JNK-interacting protein leucine zipper II CTP_synth_N PF06418.14 gi|121637606|ref|YP_977829.1| - 4.3e-119 396.7 0.0 5.7e-119 396.3 0.0 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|121637606|ref|YP_977829.1| - 3.4e-44 150.9 0.0 5.5e-44 150.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|121637606|ref|YP_977829.1| - 2.2e-07 30.9 0.2 1.1e-06 28.6 0.1 2.2 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|121637606|ref|YP_977829.1| - 0.027 14.5 0.0 0.043 13.9 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain NUDIX PF00293.28 gi|121637607|ref|YP_977830.1| - 9.2e-13 48.4 0.2 1.6e-12 47.6 0.2 1.4 1 0 0 1 1 1 1 NUDIX domain Phage_integrase PF00589.22 gi|121637608|ref|YP_977831.1| - 2.8e-46 157.4 0.0 4.4e-46 156.8 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|121637608|ref|YP_977831.1| - 1.1e-25 89.7 0.1 3e-25 88.3 0.1 1.8 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|121637608|ref|YP_977831.1| - 0.0062 17.0 0.0 0.012 16.1 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 gi|121637608|ref|YP_977831.1| - 0.024 14.7 0.5 0.14 12.3 0.1 2.4 2 1 0 2 2 2 0 Integrase DUF222 PF02720.17 gi|121637609|ref|YP_977832.1| - 4.2e-106 354.8 7.9 5.1e-106 354.6 7.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) Methyltransf_3 PF01596.17 gi|121637610|ref|YP_977833.1| - 3e-15 56.0 0.0 3.4e-15 55.8 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|121637610|ref|YP_977833.1| - 6.8e-13 49.6 0.2 9.6e-13 49.1 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain DUF531 PF04407.12 gi|121637610|ref|YP_977833.1| - 0.041 14.0 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF531) Methyltransf_25 PF13649.6 gi|121637610|ref|YP_977833.1| - 0.084 13.6 0.0 0.14 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain AA_permease PF00324.21 gi|121637611|ref|YP_977834.1| - 2.9e-97 326.2 45.2 3.7e-97 325.9 45.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|121637611|ref|YP_977834.1| - 6e-42 144.0 53.2 7.7e-42 143.6 53.2 1.0 1 0 0 1 1 1 1 Amino acid permease PPE PF00823.19 gi|121637612|ref|YP_977835.1| - 7.7e-64 214.6 25.9 7.7e-64 214.6 25.9 3.0 3 0 0 3 3 3 1 PPE family PE_PPE_C PF12484.8 gi|121637612|ref|YP_977835.1| - 1.4e-23 83.6 11.4 1.4e-23 83.6 11.4 5.6 3 1 2 5 5 5 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121637613|ref|YP_977836.1| - 4.1e-63 212.2 25.2 4.1e-63 212.2 25.2 2.4 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121637613|ref|YP_977836.1| - 6.3e-11 43.0 12.9 6.3e-11 43.0 12.9 5.8 2 2 3 5 5 5 1 Polymorphic PE/PPE proteins C terminal Sulfate_transp PF00916.20 gi|121637615|ref|YP_977838.1| - 3.5e-65 220.2 38.0 2.2e-40 138.6 5.7 2.4 2 1 1 3 3 3 2 Sulfate permease family STAS PF01740.21 gi|121637615|ref|YP_977838.1| - 6.7e-09 35.4 0.0 1.6e-08 34.2 0.0 1.7 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121637615|ref|YP_977838.1| - 4.9e-07 30.0 2.2 2.1e-06 28.0 0.1 2.7 2 0 0 2 2 2 1 STAS domain HCO3_cotransp PF00955.21 gi|121637615|ref|YP_977838.1| - 0.34 9.7 12.6 2.1 7.1 0.2 2.9 2 1 0 2 2 2 0 HCO3- transporter family PalH PF08733.10 gi|121637615|ref|YP_977838.1| - 0.92 8.4 4.5 0.1 11.5 0.4 1.6 2 0 0 2 2 2 0 PalH/RIM21 DUF5534 PF17686.1 gi|121637615|ref|YP_977838.1| - 6.8 6.9 5.2 1.3 9.2 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5534) AAA_31 PF13614.6 gi|121637616|ref|YP_977839.1| - 7.7e-61 205.1 0.0 9.5e-61 204.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121637616|ref|YP_977839.1| - 2.3e-25 89.1 0.0 9.1e-25 87.2 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|121637616|ref|YP_977839.1| - 1.1e-10 41.5 0.0 5.4e-10 39.2 0.0 1.9 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|121637616|ref|YP_977839.1| - 8.6e-09 35.2 0.0 1.5e-07 31.1 0.0 2.1 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 gi|121637616|ref|YP_977839.1| - 2.4e-07 30.3 0.5 0.0003 20.2 0.1 2.1 2 0 0 2 2 2 2 ATPase MipZ ParA PF10609.9 gi|121637616|ref|YP_977839.1| - 3.3e-07 30.0 0.1 1.1e-06 28.3 0.1 1.8 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|121637616|ref|YP_977839.1| - 1.9e-06 27.3 0.1 3.7e-06 26.3 0.1 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase VirC1 PF07015.11 gi|121637616|ref|YP_977839.1| - 3e-05 23.4 0.2 0.00018 20.9 0.1 2.0 2 0 0 2 2 2 1 VirC1 protein DUF1611 PF07755.11 gi|121637616|ref|YP_977839.1| - 0.013 14.7 0.0 0.033 13.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain MeaB PF03308.16 gi|121637616|ref|YP_977839.1| - 0.027 13.5 0.3 0.057 12.4 0.3 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|121637616|ref|YP_977839.1| - 0.26 10.9 0.2 0.92 9.1 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain SMC_ScpA PF02616.14 gi|121637617|ref|YP_977840.1| - 3.8e-86 288.9 0.1 4.3e-86 288.7 0.1 1.0 1 0 0 1 1 1 1 Segregation and condensation protein ScpA Chorismate_bind PF00425.18 gi|121637617|ref|YP_977840.1| - 0.001 18.7 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme SMC_ScpB PF04079.16 gi|121637618|ref|YP_977841.1| - 4.8e-49 166.0 0.1 6.5e-49 165.6 0.1 1.2 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_15 PF12324.8 gi|121637618|ref|YP_977841.1| - 0.00037 20.4 6.2 0.0066 16.4 1.2 2.7 2 1 0 2 2 2 2 Helix-turn-helix domain of alkylmercury lyase DprA_WH PF17782.1 gi|121637618|ref|YP_977841.1| - 0.035 14.2 2.8 0.035 14.2 2.8 2.4 2 0 0 2 2 2 0 DprA winged helix domain HTH_27 PF13463.6 gi|121637618|ref|YP_977841.1| - 0.084 13.4 0.2 0.2 12.2 0.2 1.7 1 1 0 1 1 1 0 Winged helix DNA-binding domain PseudoU_synth_2 PF00849.22 gi|121637619|ref|YP_977842.1| - 4.1e-20 72.5 0.0 1.1e-19 71.1 0.0 1.7 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 gi|121637619|ref|YP_977842.1| - 2.8e-13 49.3 0.5 2.8e-13 49.3 0.5 1.8 2 0 0 2 2 2 1 S4 domain S4_2 PF13275.6 gi|121637619|ref|YP_977842.1| - 0.083 12.7 0.1 0.17 11.7 0.1 1.5 1 0 0 1 1 1 0 S4 domain TruB_N PF01509.18 gi|121637619|ref|YP_977842.1| - 0.084 13.2 0.1 0.15 12.4 0.1 1.3 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) Cytidylate_kin PF02224.18 gi|121637620|ref|YP_977843.1| - 4.8e-82 274.8 1.3 5.5e-82 274.6 1.3 1.0 1 0 0 1 1 1 1 Cytidylate kinase Cytidylate_kin2 PF13189.6 gi|121637620|ref|YP_977843.1| - 2.6e-07 31.0 0.1 6.9e-07 29.6 0.1 1.7 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|121637620|ref|YP_977843.1| - 2.9e-07 31.1 0.0 6.6e-07 29.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|121637620|ref|YP_977843.1| - 6.5e-05 23.1 0.0 0.0075 16.4 0.0 2.2 2 0 0 2 2 2 1 Shikimate kinase AAA_30 PF13604.6 gi|121637620|ref|YP_977843.1| - 8.5e-05 22.4 2.0 0.016 14.9 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|121637620|ref|YP_977843.1| - 0.0001 22.5 0.4 0.00045 20.4 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121637620|ref|YP_977843.1| - 0.00057 20.2 0.0 0.0017 18.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|121637620|ref|YP_977843.1| - 0.0031 17.9 0.5 0.0056 17.1 0.5 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.6 gi|121637620|ref|YP_977843.1| - 0.0069 16.7 0.0 0.016 15.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121637620|ref|YP_977843.1| - 0.012 16.1 0.0 0.025 15.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|121637620|ref|YP_977843.1| - 0.016 15.1 0.0 0.059 13.3 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 gi|121637620|ref|YP_977843.1| - 0.026 14.9 0.0 0.15 12.5 0.0 2.1 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|121637620|ref|YP_977843.1| - 0.032 14.2 0.1 0.17 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 gi|121637620|ref|YP_977843.1| - 0.055 13.9 0.0 0.094 13.1 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_6 PF12774.7 gi|121637620|ref|YP_977843.1| - 0.089 11.7 0.0 0.17 10.8 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region MMR_HSR1 PF01926.23 gi|121637621|ref|YP_977844.1| - 7.3e-45 151.7 0.0 1.3e-21 76.8 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|121637621|ref|YP_977844.1| - 3.5e-26 91.6 0.0 1.8e-14 53.6 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B KH_dom-like PF14714.6 gi|121637621|ref|YP_977844.1| - 4.2e-25 87.9 0.0 9.4e-25 86.7 0.0 1.6 2 0 0 2 2 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GTP_EFTU PF00009.27 gi|121637621|ref|YP_977844.1| - 2.7e-19 69.5 0.1 2.8e-07 30.3 0.0 4.7 5 0 0 5 5 5 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|121637621|ref|YP_977844.1| - 5.3e-11 42.7 0.5 0.011 15.6 0.0 3.3 3 0 0 3 3 3 3 RsgA GTPase Dynamin_N PF00350.23 gi|121637621|ref|YP_977844.1| - 6.7e-11 42.5 0.1 0.0098 16.0 0.0 4.1 3 1 1 4 4 4 2 Dynamin family AIG1 PF04548.16 gi|121637621|ref|YP_977844.1| - 8.5e-09 35.0 0.0 1.3e-05 24.6 0.0 2.1 2 0 0 2 2 2 2 AIG1 family AAA_16 PF13191.6 gi|121637621|ref|YP_977844.1| - 2.4e-08 34.6 1.4 0.013 15.9 0.2 3.3 2 1 1 3 3 3 2 AAA ATPase domain Roc PF08477.13 gi|121637621|ref|YP_977844.1| - 1.4e-07 31.7 0.1 0.01 16.1 0.0 3.4 2 2 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase MeaB PF03308.16 gi|121637621|ref|YP_977844.1| - 3.8e-06 26.1 3.6 0.041 12.9 0.0 3.5 3 1 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Ras PF00071.22 gi|121637621|ref|YP_977844.1| - 5.3e-06 26.1 0.0 0.0042 16.7 0.0 3.0 2 2 0 2 2 2 1 Ras family AAA_28 PF13521.6 gi|121637621|ref|YP_977844.1| - 3.4e-05 24.2 0.7 0.022 15.0 0.0 3.2 4 0 0 4 4 3 1 AAA domain ABC_tran PF00005.27 gi|121637621|ref|YP_977844.1| - 0.0001 22.8 0.0 0.77 10.3 0.0 2.4 2 0 0 2 2 2 2 ABC transporter Ploopntkinase3 PF18751.1 gi|121637621|ref|YP_977844.1| - 0.00012 22.1 0.3 0.0039 17.1 0.4 2.2 2 0 0 2 2 2 1 P-loop Nucleotide Kinase3 cobW PF02492.19 gi|121637621|ref|YP_977844.1| - 0.00077 19.1 0.5 8.1 6.0 0.1 3.9 4 0 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 gi|121637621|ref|YP_977844.1| - 0.0008 18.9 0.0 1.4 8.2 0.0 2.4 2 0 0 2 2 2 2 Bacterial TniB protein ATPase_2 PF01637.18 gi|121637621|ref|YP_977844.1| - 0.0016 18.4 0.0 0.063 13.2 0.0 2.2 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|121637621|ref|YP_977844.1| - 0.0017 18.7 0.1 0.95 9.7 0.0 2.8 2 2 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|121637621|ref|YP_977844.1| - 0.0022 18.6 0.0 3.5 8.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|121637621|ref|YP_977844.1| - 0.0026 17.5 0.0 1.7 8.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.15 gi|121637621|ref|YP_977844.1| - 0.0034 17.3 0.1 0.85 9.5 0.0 2.7 2 1 0 2 2 2 1 NTPase RNA_helicase PF00910.22 gi|121637621|ref|YP_977844.1| - 0.0058 17.0 0.0 4.9 7.6 0.0 2.3 2 0 0 2 2 2 1 RNA helicase SRPRB PF09439.10 gi|121637621|ref|YP_977844.1| - 0.016 14.7 0.0 1.4 8.3 0.0 3.0 2 2 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_33 PF13671.6 gi|121637621|ref|YP_977844.1| - 0.016 15.4 2.4 0.23 11.6 0.0 2.7 3 1 0 3 3 2 0 AAA domain Arf PF00025.21 gi|121637621|ref|YP_977844.1| - 0.021 14.3 0.1 14 5.1 0.0 3.2 3 1 0 3 3 3 0 ADP-ribosylation factor family AAA_29 PF13555.6 gi|121637621|ref|YP_977844.1| - 0.022 14.5 0.0 3.9 7.3 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA PF00004.29 gi|121637621|ref|YP_977844.1| - 0.03 14.8 0.0 5.2 7.5 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) GBP PF02263.19 gi|121637621|ref|YP_977844.1| - 0.03 13.6 0.1 6 6.0 0.0 2.5 2 1 0 2 2 2 0 Guanylate-binding protein, N-terminal domain NB-ARC PF00931.22 gi|121637621|ref|YP_977844.1| - 0.031 13.4 0.0 0.95 8.6 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain ATP_bind_1 PF03029.17 gi|121637621|ref|YP_977844.1| - 0.044 13.6 0.0 8.7 6.1 0.0 3.1 4 0 0 4 4 4 0 Conserved hypothetical ATP binding protein NACHT PF05729.12 gi|121637621|ref|YP_977844.1| - 0.08 12.9 0.0 18 5.2 0.0 3.0 4 0 0 4 4 3 0 NACHT domain MMR_HSR1_Xtn PF16897.5 gi|121637621|ref|YP_977844.1| - 0.093 12.7 0.0 2.2 8.3 0.0 2.3 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|121637621|ref|YP_977844.1| - 0.11 12.2 0.0 26 4.5 0.0 3.2 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation adh_short_C2 PF13561.6 gi|121637622|ref|YP_977845.1| - 3.2e-49 167.6 1.6 3.7e-49 167.4 1.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637622|ref|YP_977845.1| - 2.3e-35 121.8 0.6 2.9e-35 121.5 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637622|ref|YP_977845.1| - 8.8e-15 55.1 2.1 1.3e-14 54.5 2.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121637622|ref|YP_977845.1| - 0.026 14.0 0.4 0.051 13.0 0.4 1.6 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|121637622|ref|YP_977845.1| - 0.038 13.1 0.0 0.049 12.8 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NmrA PF05368.13 gi|121637622|ref|YP_977845.1| - 0.19 11.2 0.2 0.26 10.8 0.2 1.4 1 0 0 1 1 1 0 NmrA-like family 3HCDH_N PF02737.18 gi|121637623|ref|YP_977846.1| - 6.4e-48 163.0 3.9 5.2e-47 160.1 3.9 2.0 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|121637623|ref|YP_977846.1| - 6e-21 74.9 0.0 1.3e-20 73.8 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|121637623|ref|YP_977846.1| - 2.5e-07 31.0 0.4 4.9e-07 30.1 0.4 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|121637623|ref|YP_977846.1| - 0.0011 19.0 0.4 0.002 18.2 0.4 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 gi|121637623|ref|YP_977846.1| - 0.0096 15.6 0.4 0.018 14.7 0.4 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|121637623|ref|YP_977846.1| - 0.012 15.6 0.4 0.025 14.5 0.4 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.21 gi|121637623|ref|YP_977846.1| - 0.013 14.8 4.5 0.021 14.1 4.5 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DapB_N PF01113.20 gi|121637623|ref|YP_977846.1| - 0.021 14.9 0.3 0.038 14.1 0.3 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus UDPG_MGDP_dh_N PF03721.14 gi|121637623|ref|YP_977846.1| - 0.037 13.6 0.1 0.059 12.9 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.27 gi|121637623|ref|YP_977846.1| - 0.073 13.6 1.4 0.17 12.4 1.4 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|121637623|ref|YP_977846.1| - 0.077 13.3 1.6 0.16 12.2 1.6 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|121637623|ref|YP_977846.1| - 0.14 12.4 3.3 0.29 11.4 3.3 1.5 1 0 0 1 1 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|121637623|ref|YP_977846.1| - 0.18 11.2 1.5 0.54 9.6 1.4 1.8 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OTCace PF00185.24 gi|121637623|ref|YP_977846.1| - 0.18 11.9 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pyr_redox_2 PF07992.14 gi|121637623|ref|YP_977846.1| - 0.45 9.7 5.4 0.17 11.1 2.4 1.7 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121637623|ref|YP_977846.1| - 7.1 6.9 7.2 2.3 8.5 1.0 2.6 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Cyclase PF04199.13 gi|121637624|ref|YP_977847.1| - 5.5e-35 120.6 0.4 7.5e-35 120.1 0.4 1.2 1 0 0 1 1 1 1 Putative cyclase Cupin_2 PF07883.11 gi|121637625|ref|YP_977848.1| - 1.1e-08 34.7 0.1 1.6e-08 34.1 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|121637625|ref|YP_977848.1| - 0.024 14.3 0.1 0.03 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Glyco_hydro_79C PF16862.5 gi|121637625|ref|YP_977848.1| - 0.079 13.9 0.1 0.099 13.5 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 79 C-terminal beta domain BKACE PF05853.12 gi|121637626|ref|YP_977849.1| - 1.1e-58 198.8 0.0 1.2e-58 198.5 0.0 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme IclR PF01614.18 gi|121637627|ref|YP_977850.1| - 1.4e-35 122.0 0.0 3.2e-35 120.8 0.0 1.6 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 gi|121637627|ref|YP_977850.1| - 3.8e-13 49.0 1.5 6.5e-13 48.3 0.7 1.8 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|121637627|ref|YP_977850.1| - 2.1e-11 43.2 0.1 4e-11 42.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|121637627|ref|YP_977850.1| - 2.6e-10 40.0 0.4 7.3e-10 38.6 0.4 1.7 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|121637627|ref|YP_977850.1| - 1.3e-09 37.9 0.4 6.2e-09 35.7 0.1 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|121637627|ref|YP_977850.1| - 5.1e-08 32.7 0.0 9.1e-08 31.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|121637627|ref|YP_977850.1| - 1.1e-06 28.2 0.1 2.6e-06 27.0 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Rrf2 PF02082.20 gi|121637627|ref|YP_977850.1| - 5.9e-06 26.5 0.2 1.1e-05 25.7 0.2 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_AsnC-type PF13404.6 gi|121637627|ref|YP_977850.1| - 3.4e-05 23.6 0.2 0.00013 21.7 0.2 2.1 1 1 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_31 PF13560.6 gi|121637627|ref|YP_977850.1| - 4.2e-05 23.8 0.8 0.00018 21.8 0.8 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|121637627|ref|YP_977850.1| - 0.0001 22.3 2.8 0.00017 21.6 0.4 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 gi|121637627|ref|YP_977850.1| - 0.00011 22.1 0.0 0.00024 20.9 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_3 PF01381.22 gi|121637627|ref|YP_977850.1| - 0.00012 22.1 0.0 0.00024 21.1 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_28 PF13518.6 gi|121637627|ref|YP_977850.1| - 0.00012 22.1 0.4 0.00073 19.6 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121637627|ref|YP_977850.1| - 0.00017 21.4 0.0 0.00043 20.1 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 gi|121637627|ref|YP_977850.1| - 0.00018 21.4 0.1 0.00042 20.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn helix Crp PF00325.20 gi|121637627|ref|YP_977850.1| - 0.00022 20.8 0.1 0.00042 19.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_38 PF13936.6 gi|121637627|ref|YP_977850.1| - 0.00037 20.2 0.0 0.00086 19.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|121637627|ref|YP_977850.1| - 0.0004 20.3 0.0 0.00084 19.2 0.0 1.5 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.16 gi|121637627|ref|YP_977850.1| - 0.00051 19.5 0.1 0.0014 18.1 0.1 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 GntR PF00392.21 gi|121637627|ref|YP_977850.1| - 0.0032 17.1 0.3 0.0088 15.7 0.3 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|121637627|ref|YP_977850.1| - 0.0044 17.2 0.0 0.0088 16.2 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_CodY PF08222.11 gi|121637627|ref|YP_977850.1| - 0.0079 15.7 0.2 0.02 14.5 0.1 1.7 2 0 0 2 2 2 1 CodY helix-turn-helix domain Metal_resist PF13801.6 gi|121637627|ref|YP_977850.1| - 0.01 16.0 1.3 0.025 14.7 1.3 1.6 1 0 0 1 1 1 0 Heavy-metal resistance HTH_27 PF13463.6 gi|121637627|ref|YP_977850.1| - 0.011 16.3 0.0 0.022 15.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|121637627|ref|YP_977850.1| - 0.015 15.2 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain RP-C PF03428.13 gi|121637627|ref|YP_977850.1| - 0.024 14.3 0.0 0.051 13.2 0.0 1.5 1 0 0 1 1 1 0 Replication protein C N-terminal domain CENP-B_N PF04218.13 gi|121637627|ref|YP_977850.1| - 0.044 13.4 0.0 0.081 12.6 0.0 1.4 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Sigma70_r4_2 PF08281.12 gi|121637627|ref|YP_977850.1| - 0.047 13.4 0.4 0.3 10.8 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_37 PF13744.6 gi|121637627|ref|YP_977850.1| - 0.065 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_47 PF16221.5 gi|121637627|ref|YP_977850.1| - 0.07 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 winged helix-turn-helix TFIIE_alpha PF02002.17 gi|121637627|ref|YP_977850.1| - 0.083 12.8 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 1 0 TFIIE alpha subunit RNA_pol_Rpc34 PF05158.12 gi|121637627|ref|YP_977850.1| - 0.1 12.0 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_7 PF02796.15 gi|121637627|ref|YP_977850.1| - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase BLACT_WH PF17778.1 gi|121637627|ref|YP_977850.1| - 0.14 12.1 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain PIN PF01850.21 gi|121637628|ref|YP_977851.1| - 2.1e-06 28.2 0.0 3e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 PIN domain ParD PF09386.10 gi|121637629|ref|YP_977852.1| - 0.015 15.7 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 Antitoxin ParD RHH_1 PF01402.21 gi|121637629|ref|YP_977852.1| - 0.02 14.8 0.8 0.02 14.8 0.8 2.9 1 1 1 2 2 2 0 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121637629|ref|YP_977852.1| - 0.024 14.5 2.3 0.098 12.6 0.4 2.4 2 1 0 2 2 2 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 ATP-grasp_3 PF02655.14 gi|121637630|ref|YP_977853.1| - 0.00061 19.9 0.0 0.001 19.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|121637630|ref|YP_977853.1| - 0.0019 17.7 0.0 0.15 11.6 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain Beta-lactamase PF00144.24 gi|121637631|ref|YP_977854.1| - 4.6e-42 144.4 1.1 6.1e-42 144.0 1.1 1.1 1 0 0 1 1 1 1 Beta-lactamase LPD5 PF18799.1 gi|121637632|ref|YP_977855.1| - 0.033 14.6 0.1 0.047 14.1 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 HxlR PF01638.17 gi|121637633|ref|YP_977856.1| - 6.1e-27 93.3 0.0 8.8e-27 92.8 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MDMPI_C PF07398.11 gi|121637633|ref|YP_977856.1| - 0.00034 21.4 3.7 0.084 13.7 0.0 2.4 1 1 0 2 2 2 2 MDMPI C-terminal domain HTH_20 PF12840.7 gi|121637633|ref|YP_977856.1| - 0.029 14.4 0.6 0.05 13.7 0.6 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain FAD_binding_4 PF01565.23 gi|121637634|ref|YP_977857.1| - 9.3e-29 99.9 6.2 2.1e-28 98.8 6.2 1.6 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 gi|121637634|ref|YP_977857.1| - 1.5e-13 50.6 1.0 6.3e-13 48.6 0.1 2.3 3 0 0 3 3 3 1 Berberine and berberine like MDMPI_N PF11716.8 gi|121637635|ref|YP_977858.1| - 6e-13 49.7 3.3 6e-13 49.7 3.3 2.4 2 1 0 2 2 2 1 Mycothiol maleylpyruvate isomerase N-terminal domain DinB PF05163.12 gi|121637635|ref|YP_977858.1| - 0.018 15.0 0.0 0.028 14.4 0.0 1.4 1 0 0 1 1 1 0 DinB family DinB_2 PF12867.7 gi|121637635|ref|YP_977858.1| - 0.031 14.8 0.1 0.044 14.3 0.1 1.4 1 1 0 1 1 1 0 DinB superfamily LCM PF04072.14 gi|121637637|ref|YP_977860.1| - 2.8e-64 216.5 0.1 3.8e-64 216.1 0.1 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Beta-lactamase PF00144.24 gi|121637638|ref|YP_977861.1| - 2.4e-69 234.1 4.6 4e-69 233.4 4.6 1.3 1 0 0 1 1 1 1 Beta-lactamase SnoaL_2 PF12680.7 gi|121637638|ref|YP_977861.1| - 1 10.0 6.3 8.4 7.1 0.2 4.4 5 1 0 5 5 5 0 SnoaL-like domain Aldedh PF00171.22 gi|121637639|ref|YP_977862.1| - 7.5e-137 456.6 0.1 9.1e-137 456.3 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AhpC-TSA PF00578.21 gi|121637640|ref|YP_977863.1| - 3.2e-20 72.3 0.0 4.2e-20 71.9 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121637640|ref|YP_977863.1| - 6.4e-16 58.4 0.0 7.8e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 gi|121637640|ref|YP_977863.1| - 0.0026 18.2 0.0 0.0045 17.4 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain 2-oxoacid_dh PF00198.23 gi|121637642|ref|YP_977865.1| - 8.3e-09 35.2 0.0 9.5e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SLAC1 PF03595.17 gi|121637643|ref|YP_977866.1| - 8.9e-10 38.3 13.7 1e-09 38.1 13.7 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Nitrate_red_gam PF02665.14 gi|121637644|ref|YP_977867.1| - 3.5e-85 285.0 12.6 4.9e-85 284.5 12.6 1.2 1 0 0 1 1 1 1 Nitrate reductase gamma subunit Molybdopterin PF00384.22 gi|121637644|ref|YP_977867.1| - 1.4e-31 110.0 0.0 1.8e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Nitrate_red_del PF02613.15 gi|121637644|ref|YP_977867.1| - 2.8e-08 33.9 0.0 4.4e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Nitrate reductase delta subunit Molybdop_Fe4S4 PF04879.16 gi|121637644|ref|YP_977867.1| - 0.022 14.8 0.1 0.043 13.8 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain DUF3681 PF12442.8 gi|121637644|ref|YP_977867.1| - 0.34 11.4 5.1 0.93 10.0 3.9 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3681) MFS_1 PF07690.16 gi|121637645|ref|YP_977868.1| - 2.7e-36 125.2 49.7 4.1e-36 124.6 49.7 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|121637645|ref|YP_977868.1| - 1.8e-06 27.1 10.6 0.00027 19.9 0.5 3.0 2 2 0 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 gi|121637645|ref|YP_977868.1| - 0.00066 18.7 26.8 0.005 15.7 14.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 gi|121637645|ref|YP_977868.1| - 2.7 6.2 7.3 0.19 10.0 0.1 2.4 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF1876 PF08962.11 gi|121637646|ref|YP_977869.1| - 6.4e-33 112.6 0.4 7.2e-33 112.4 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1876) Sulfate_transp PF00916.20 gi|121637647|ref|YP_977870.1| - 6.5e-104 347.7 23.0 8.4e-104 347.3 23.0 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 gi|121637647|ref|YP_977870.1| - 8.2e-18 64.1 0.0 1.3e-17 63.5 0.0 1.3 1 0 0 1 1 1 1 STAS domain PSK_trans_fac PF07704.11 gi|121637648|ref|YP_977871.1| - 3.9e-17 62.8 1.1 4.2e-17 62.7 1.1 1.0 1 0 0 1 1 1 1 Rv0623-like transcription factor PIN PF01850.21 gi|121637649|ref|YP_977872.1| - 6.4e-05 23.4 0.0 7.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 PIN domain End_N_terminal PF12218.8 gi|121637649|ref|YP_977872.1| - 0.002 17.8 0.0 0.0075 15.9 0.0 1.9 1 1 0 1 1 1 1 N terminal extension of bacteriophage endosialidase Pkinase PF00069.25 gi|121637651|ref|YP_977874.1| - 1.1e-42 146.3 0.0 1.4e-42 145.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121637651|ref|YP_977874.1| - 3.9e-27 95.2 0.0 5.3e-27 94.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Thioredoxin_4 PF13462.6 gi|121637651|ref|YP_977874.1| - 3.4e-08 33.8 0.0 5.7e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin APH PF01636.23 gi|121637651|ref|YP_977874.1| - 9.4e-06 25.7 3.7 0.012 15.6 0.0 3.0 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|121637651|ref|YP_977874.1| - 1.7e-05 24.3 0.0 3.2e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DSBA PF01323.20 gi|121637651|ref|YP_977874.1| - 0.00068 19.5 0.4 0.0082 15.9 0.2 2.5 2 1 0 2 2 2 1 DSBA-like thioredoxin domain Pkinase_fungal PF17667.1 gi|121637651|ref|YP_977874.1| - 0.0014 17.5 0.0 0.0022 16.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase NUDIX PF00293.28 gi|121637653|ref|YP_977876.1| - 2.2e-18 66.6 0.0 2.6e-18 66.3 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Pkinase PF00069.25 gi|121637654|ref|YP_977877.1| - 8.6e-39 133.5 0.0 1.1e-38 133.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121637654|ref|YP_977877.1| - 1.1e-23 83.8 0.0 1.5e-23 83.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 gi|121637654|ref|YP_977877.1| - 2.1e-05 23.5 0.0 3.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH_6_hur PF04655.14 gi|121637654|ref|YP_977877.1| - 0.022 14.1 0.0 0.23 10.8 0.0 2.2 2 0 0 2 2 2 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase Kdo PF06293.14 gi|121637654|ref|YP_977877.1| - 0.027 13.8 0.0 0.057 12.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|121637654|ref|YP_977877.1| - 0.068 13.1 4.5 0.044 13.7 1.2 2.3 2 1 0 2 2 2 0 Phosphotransferase enzyme family STT3 PF02516.14 gi|121637654|ref|YP_977877.1| - 0.27 10.1 0.1 0.38 9.6 0.1 1.1 1 0 0 1 1 1 0 Oligosaccharyl transferase STT3 subunit ABC_tran PF00005.27 gi|121637655|ref|YP_977878.1| - 3.7e-31 108.5 0.0 5.7e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter FHA PF00498.26 gi|121637655|ref|YP_977878.1| - 1e-29 102.6 1.2 4.7e-15 55.7 0.1 2.6 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 gi|121637655|ref|YP_977878.1| - 3.5e-24 84.9 0.0 1.4e-12 47.7 0.0 2.8 2 0 0 2 2 2 2 Inner membrane component of T3SS, cytoplasmic domain ABC2_membrane PF01061.24 gi|121637655|ref|YP_977878.1| - 6.4e-20 71.5 6.3 1.1e-19 70.7 6.3 1.4 1 0 0 1 1 1 1 ABC-2 type transporter AAA_21 PF13304.6 gi|121637655|ref|YP_977878.1| - 1.4e-11 44.8 0.3 6.1e-08 32.8 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane_3 PF12698.7 gi|121637655|ref|YP_977878.1| - 1.4e-06 27.7 5.4 2.6e-06 26.8 5.4 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein SMC_N PF02463.19 gi|121637655|ref|YP_977878.1| - 7.4e-05 22.3 0.0 0.0085 15.5 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|121637655|ref|YP_977878.1| - 0.00068 19.9 0.3 0.0034 17.7 0.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637655|ref|YP_977878.1| - 0.0033 17.8 0.0 0.0069 16.8 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|121637655|ref|YP_977878.1| - 0.019 14.7 0.1 0.054 13.3 0.1 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain Cytidylate_kin PF02224.18 gi|121637655|ref|YP_977878.1| - 0.031 14.0 0.1 0.26 11.0 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase RsgA_GTPase PF03193.16 gi|121637655|ref|YP_977878.1| - 0.05 13.5 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 gi|121637655|ref|YP_977878.1| - 0.07 13.4 0.5 0.84 9.9 0.0 2.6 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 gi|121637655|ref|YP_977878.1| - 0.072 13.3 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|121637655|ref|YP_977878.1| - 0.1 12.8 0.0 0.25 11.6 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA PF00004.29 gi|121637655|ref|YP_977878.1| - 0.15 12.5 0.1 0.38 11.2 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|121637655|ref|YP_977878.1| - 0.17 11.6 0.8 0.58 9.9 0.8 1.9 1 1 0 1 1 1 0 AAA domain ABC2_membrane_2 PF12679.7 gi|121637655|ref|YP_977878.1| - 0.25 10.6 9.4 0.85 8.8 9.0 1.9 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF4439 PF14530.6 gi|121637656|ref|YP_977879.1| - 0.17 12.6 6.7 0.16 12.6 1.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4439) Phage_holin_3_6 PF07332.11 gi|121637657|ref|YP_977880.1| - 0.0033 17.5 1.7 0.013 15.5 0.0 2.2 2 0 0 2 2 2 1 Putative Actinobacterial Holin-X, holin superfamily III DUF4064 PF13273.6 gi|121637657|ref|YP_977880.1| - 0.09 13.1 1.9 0.19 12.0 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) PMT PF02366.18 gi|121637657|ref|YP_977880.1| - 0.16 11.5 4.1 1.9 8.0 0.8 2.3 1 1 1 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF4173 PF13777.6 gi|121637657|ref|YP_977880.1| - 0.72 9.3 5.4 0.57 9.6 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4173) AMP-binding PF00501.28 gi|121637658|ref|YP_977881.1| - 1.4e-53 182.0 0.1 1.8e-53 181.7 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121637658|ref|YP_977881.1| - 3.6e-08 34.3 0.0 1.2e-07 32.6 0.0 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain FAD_binding_3 PF01494.19 gi|121637659|ref|YP_977882.1| - 2.5e-78 263.8 0.0 3e-78 263.5 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|121637659|ref|YP_977882.1| - 3.5e-11 43.3 0.7 7e-06 25.9 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121637659|ref|YP_977882.1| - 2.9e-06 27.4 0.3 7.1e-06 26.2 0.3 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|121637659|ref|YP_977882.1| - 3.4e-06 26.2 0.3 0.048 12.5 0.0 3.0 2 1 0 3 3 3 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|121637659|ref|YP_977882.1| - 6.4e-06 25.5 5.1 0.0068 15.5 0.6 3.0 3 1 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.14 gi|121637659|ref|YP_977882.1| - 3.6e-05 23.2 0.0 9.9e-05 21.7 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121637659|ref|YP_977882.1| - 0.00021 20.1 0.1 0.00044 19.1 0.1 1.5 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox PF00070.27 gi|121637659|ref|YP_977882.1| - 0.00043 20.8 0.1 0.0021 18.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121637659|ref|YP_977882.1| - 0.0016 17.8 0.0 0.0023 17.3 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121637659|ref|YP_977882.1| - 0.0032 16.9 1.7 0.026 13.9 0.5 2.4 2 1 0 2 2 2 1 FAD dependent oxidoreductase SE PF08491.10 gi|121637659|ref|YP_977882.1| - 0.0041 16.2 0.0 0.25 10.4 0.0 2.1 2 0 0 2 2 2 1 Squalene epoxidase Lycopene_cycl PF05834.12 gi|121637659|ref|YP_977882.1| - 0.0059 15.7 1.9 0.22 10.5 0.2 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|121637659|ref|YP_977882.1| - 0.0069 15.5 0.1 0.011 14.8 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A ApbA PF02558.16 gi|121637659|ref|YP_977882.1| - 0.19 11.3 0.5 0.5 10.0 0.2 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA PPE PF00823.19 gi|121637661|ref|YP_977884.1| - 9.5e-56 188.3 32.6 9.5e-56 188.3 32.6 1.6 2 0 0 2 2 2 1 PPE family Pentapeptide_2 PF01469.18 gi|121637661|ref|YP_977884.1| - 2.6e-41 139.2 261.8 3.1e-11 43.0 23.0 10.4 5 2 4 10 10 10 8 Pentapeptide repeats (8 copies) PAD_porph PF04371.15 gi|121637661|ref|YP_977884.1| - 0.14 11.5 0.6 0.19 11.0 0.6 1.1 1 0 0 1 1 1 0 Porphyromonas-type peptidyl-arginine deiminase DUF3144 PF11342.8 gi|121637661|ref|YP_977884.1| - 3.1 8.2 5.9 6.7 7.1 5.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) DUF4185 PF13810.6 gi|121637662|ref|YP_977885.1| - 1.3e-119 399.1 4.4 1.6e-119 398.8 4.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4185) Phosphoesterase PF04185.14 gi|121637663|ref|YP_977886.1| - 6.9e-129 430.1 0.0 8.2e-129 429.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoesterase family Glycos_transf_1 PF00534.20 gi|121637664|ref|YP_977887.1| - 6.1e-25 87.7 0.0 9.2e-25 87.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|121637664|ref|YP_977887.1| - 8.2e-22 78.1 0.1 1.5e-21 77.2 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|121637664|ref|YP_977887.1| - 6.6e-09 36.1 0.2 1.4e-08 35.0 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121637664|ref|YP_977887.1| - 1.2e-05 25.4 1.7 1.5e-05 25.1 0.2 1.9 3 0 0 3 3 3 1 Glycosyltransferase Family 4 DUF3880 PF12996.7 gi|121637664|ref|YP_977887.1| - 0.017 15.2 0.0 0.45 10.6 0.0 2.2 2 0 0 2 2 2 0 DUF based on E. rectale Gene description (DUF3880) Oxidored_molyb PF00174.19 gi|121637665|ref|YP_977888.1| - 7.3e-54 182.0 0.0 1.1e-53 181.3 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 gi|121637665|ref|YP_977888.1| - 1.7e-22 79.9 0.0 3.1e-22 79.1 0.0 1.5 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Big_7 PF17957.1 gi|121637665|ref|YP_977888.1| - 0.00038 21.2 0.0 0.00086 20.0 0.0 1.6 1 1 0 1 1 1 1 Bacterial Ig domain MMPL PF03176.15 gi|121637666|ref|YP_977889.1| - 3.8e-177 588.2 39.2 6.6e-94 314.5 17.0 2.5 2 0 0 2 2 2 2 MMPL family NPV_P10 PF05531.12 gi|121637666|ref|YP_977889.1| - 0.0067 16.9 0.0 4.4 7.9 0.0 3.2 2 1 0 3 3 3 1 Nucleopolyhedrovirus P10 protein Myosin_head PF00063.21 gi|121637666|ref|YP_977889.1| - 0.062 11.5 0.0 0.087 11.0 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) DUF5464 PF17552.2 gi|121637666|ref|YP_977889.1| - 1.8 8.9 7.3 15 5.9 7.3 2.8 1 0 0 1 1 1 0 Family of unknown function (DUF5464) Cutinase PF01083.22 gi|121637667|ref|YP_977890.1| - 1.1e-48 165.6 0.1 1.2e-48 165.4 0.1 1.0 1 0 0 1 1 1 1 Cutinase Abhydrolase_3 PF07859.13 gi|121637667|ref|YP_977890.1| - 0.022 14.6 0.2 0.034 14.0 0.2 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 gi|121637667|ref|YP_977890.1| - 0.024 14.5 0.1 0.038 13.8 0.1 1.3 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase PE PF00934.20 gi|121637669|ref|YP_977892.1| - 3.2e-32 110.7 15.4 3.8e-32 110.5 15.4 1.0 1 0 0 1 1 1 1 PE family WES_acyltransf PF03007.16 gi|121637670|ref|YP_977893.1| - 1.9e-87 293.4 0.0 2.4e-87 293.0 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121637670|ref|YP_977893.1| - 2.1e-16 60.2 0.0 4.4e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121637670|ref|YP_977893.1| - 0.03 13.0 0.0 0.046 12.4 0.0 1.2 1 0 0 1 1 1 0 Condensation domain DUF5073 PF16817.5 gi|121637671|ref|YP_977894.1| - 7.9e-72 239.0 2.1 8.8e-72 238.8 2.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5073) Pro_dh-DNA_bdg PF14850.6 gi|121637671|ref|YP_977894.1| - 0.0099 16.4 0.0 0.014 15.9 0.0 1.2 1 0 0 1 1 1 1 DNA-binding domain of Proline dehydrogenase YbjQ_1 PF01906.17 gi|121637672|ref|YP_977895.1| - 1.5e-20 73.7 2.4 2.6e-09 37.6 0.1 2.2 2 0 0 2 2 2 2 Putative heavy-metal-binding GPHH PF16905.5 gi|121637672|ref|YP_977895.1| - 0.11 12.2 0.0 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 Voltage-dependent L-type calcium channel, IQ-associated DUF2207 PF09972.9 gi|121637673|ref|YP_977896.1| - 0.091 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4131 PF13567.6 gi|121637673|ref|YP_977896.1| - 0.1 12.2 4.5 0.19 11.4 4.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Prominin PF05478.11 gi|121637673|ref|YP_977896.1| - 0.2 9.6 0.0 0.24 9.3 0.0 1.0 1 0 0 1 1 1 0 Prominin Phage_holin_3_6 PF07332.11 gi|121637673|ref|YP_977896.1| - 0.29 11.2 5.3 0.22 11.5 2.7 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF222 PF02720.17 gi|121637675|ref|YP_977898.1| - 2.1e-48 165.4 4.8 3.6e-48 164.6 4.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HTH_IclR PF09339.10 gi|121637675|ref|YP_977898.1| - 1.5e-11 43.9 1.4 1.5e-11 43.9 1.4 2.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HNH PF01844.23 gi|121637675|ref|YP_977898.1| - 2e-07 31.1 1.9 3.7e-07 30.2 1.9 1.4 1 0 0 1 1 1 1 HNH endonuclease MarR_2 PF12802.7 gi|121637675|ref|YP_977898.1| - 1.9e-05 24.4 3.2 4.4e-05 23.3 1.0 2.7 2 0 0 2 2 2 1 MarR family IclR PF01614.18 gi|121637675|ref|YP_977898.1| - 0.00036 20.4 0.0 0.00062 19.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial transcriptional regulator HNH_2 PF13391.6 gi|121637675|ref|YP_977898.1| - 0.027 14.6 2.1 0.18 12.0 1.8 2.4 2 1 0 2 2 2 0 HNH endonuclease RP-C PF03428.13 gi|121637675|ref|YP_977898.1| - 0.027 14.1 0.1 0.067 12.8 0.1 1.6 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_DeoR PF08220.12 gi|121637675|ref|YP_977898.1| - 0.038 13.7 0.0 0.075 12.8 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_5 PF01022.20 gi|121637675|ref|YP_977898.1| - 0.062 13.2 0.1 0.35 10.8 0.1 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121637675|ref|YP_977898.1| - 0.081 13.0 1.6 0.17 11.9 0.3 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain zf-ISL3 PF14690.6 gi|121637675|ref|YP_977898.1| - 1.2 9.9 4.0 1.6 9.4 0.0 2.8 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FAD_binding_4 PF01565.23 gi|121637676|ref|YP_977899.1| - 3.5e-30 104.5 1.3 5.2e-30 104.0 1.3 1.3 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 gi|121637676|ref|YP_977899.1| - 0.15 12.2 0.0 0.33 11.1 0.0 1.6 1 0 0 1 1 1 0 Berberine and berberine like DAPG_hydrolase PF18089.1 gi|121637677|ref|YP_977900.1| - 2.8e-66 223.3 0.0 3.4e-66 223.0 0.0 1.0 1 0 0 1 1 1 1 DAPG hydrolase PhiG domain TetR_N PF00440.23 gi|121637678|ref|YP_977901.1| - 1.6e-07 31.0 0.1 2.6e-07 30.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 gi|121637678|ref|YP_977901.1| - 0.0032 17.5 0.1 0.0061 16.6 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_11 PF08279.12 gi|121637678|ref|YP_977901.1| - 0.065 13.2 0.0 0.18 11.8 0.0 1.7 2 0 0 2 2 2 0 HTH domain p450 PF00067.22 gi|121637679|ref|YP_977902.1| - 7.6e-23 81.0 0.0 3.6e-20 72.1 0.0 3.0 2 1 0 2 2 2 2 Cytochrome P450 DUF4407 PF14362.6 gi|121637681|ref|YP_977904.1| - 1.1e-54 185.8 5.3 1.1e-54 185.8 5.3 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4407) Glyco_hydro_77 PF02446.17 gi|121637683|ref|YP_977906.1| - 1.2e-121 406.9 0.0 1.6e-121 406.5 0.0 1.1 1 0 0 1 1 1 1 4-alpha-glucanotransferase T7SS_ESX1_EccB PF05108.13 gi|121637684|ref|YP_977907.1| - 1e-154 515.7 3.5 1.2e-154 515.6 3.5 1.0 1 0 0 1 1 1 1 Type VII secretion system ESX-1, transport TM domain B FtsK_SpoIIIE PF01580.18 gi|121637685|ref|YP_977908.1| - 4.8e-114 379.7 0.0 4.5e-82 275.1 0.0 4.8 5 0 0 5 5 5 4 FtsK/SpoIIIE family AAA_16 PF13191.6 gi|121637685|ref|YP_977908.1| - 1.2e-10 42.0 0.0 0.008 16.6 0.0 3.6 3 0 0 3 3 3 3 AAA ATPase domain Adeno_IVa2 PF02456.15 gi|121637685|ref|YP_977908.1| - 6.8e-08 31.7 0.0 2.9e-06 26.3 0.0 2.2 2 0 0 2 2 2 1 Adenovirus IVa2 protein NACHT PF05729.12 gi|121637685|ref|YP_977908.1| - 3e-07 30.5 0.1 0.021 14.7 0.0 3.1 3 0 0 3 3 3 2 NACHT domain AAA_22 PF13401.6 gi|121637685|ref|YP_977908.1| - 5.9e-07 29.8 0.0 0.13 12.5 0.0 4.0 3 2 0 3 3 3 2 AAA domain AAA_29 PF13555.6 gi|121637685|ref|YP_977908.1| - 3.3e-06 26.8 0.5 0.15 11.9 0.0 3.0 3 0 0 3 3 3 2 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 gi|121637685|ref|YP_977908.1| - 7e-06 26.0 0.1 0.073 12.8 0.1 3.0 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|121637685|ref|YP_977908.1| - 1.9e-05 25.0 0.5 0.02 15.2 0.0 3.8 4 0 0 4 4 3 1 AAA domain ABC_tran PF00005.27 gi|121637685|ref|YP_977908.1| - 3.7e-05 24.3 1.1 1.3 9.5 0.2 3.3 3 0 0 3 3 3 2 ABC transporter AAA_14 PF13173.6 gi|121637685|ref|YP_977908.1| - 0.00021 21.3 0.0 9.6 6.2 0.0 3.9 4 0 0 4 4 3 0 AAA domain DUF87 PF01935.17 gi|121637685|ref|YP_977908.1| - 0.001 19.2 1.4 0.16 12.0 0.1 2.5 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_33 PF13671.6 gi|121637685|ref|YP_977908.1| - 0.0027 17.9 0.0 2.4 8.3 0.0 3.3 3 0 0 3 3 3 1 AAA domain TrwB_AAD_bind PF10412.9 gi|121637685|ref|YP_977908.1| - 0.0028 16.6 3.0 2.4 7.0 0.0 3.4 4 0 0 4 4 4 2 Type IV secretion-system coupling protein DNA-binding domain T2SSE PF00437.20 gi|121637685|ref|YP_977908.1| - 0.003 16.6 4.2 0.7 8.9 0.1 3.1 3 0 0 3 3 3 1 Type II/IV secretion system protein AAA PF00004.29 gi|121637685|ref|YP_977908.1| - 0.0033 17.9 0.6 6.1 7.3 0.0 4.3 4 1 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|121637685|ref|YP_977908.1| - 0.0038 17.6 0.1 6.4 7.2 0.0 3.4 3 0 0 3 3 3 0 RNA helicase AAA_10 PF12846.7 gi|121637685|ref|YP_977908.1| - 0.013 14.5 0.3 1.2 8.0 0.0 2.6 3 0 0 3 3 3 0 AAA-like domain G-alpha PF00503.20 gi|121637685|ref|YP_977908.1| - 0.013 14.6 0.1 1.1 8.3 0.0 2.9 3 0 0 3 3 3 0 G-protein alpha subunit ATPase_2 PF01637.18 gi|121637685|ref|YP_977908.1| - 0.014 15.3 0.0 10 6.0 0.0 3.5 4 0 0 4 4 3 0 ATPase domain predominantly from Archaea ATP_bind_1 PF03029.17 gi|121637685|ref|YP_977908.1| - 0.016 15.0 0.6 2.1 8.0 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|121637685|ref|YP_977908.1| - 0.016 14.8 0.7 2.4 7.7 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 gi|121637685|ref|YP_977908.1| - 0.028 13.9 0.8 9.7 5.7 0.1 3.0 3 0 0 3 3 3 0 P-loop containing dynein motor region AAA_18 PF13238.6 gi|121637685|ref|YP_977908.1| - 0.03 14.9 0.1 8.9 6.9 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|121637685|ref|YP_977908.1| - 0.046 13.4 3.0 1.2 8.9 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_24 PF13479.6 gi|121637685|ref|YP_977908.1| - 0.073 12.8 0.0 8.3 6.1 0.1 2.6 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 gi|121637685|ref|YP_977908.1| - 0.08 12.1 0.1 4 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_23 PF13476.6 gi|121637685|ref|YP_977908.1| - 0.083 13.4 0.8 7.8 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain DEAD PF00270.29 gi|121637685|ref|YP_977908.1| - 0.087 12.6 0.0 2.3 8.0 0.0 2.3 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_25 PF13481.6 gi|121637685|ref|YP_977908.1| - 0.088 12.4 4.7 0.67 9.5 0.0 3.8 3 1 0 3 3 2 0 AAA domain MMR_HSR1 PF01926.23 gi|121637685|ref|YP_977908.1| - 0.1 12.6 0.1 15 5.7 0.0 3.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase NB-ARC PF00931.22 gi|121637685|ref|YP_977908.1| - 0.11 11.7 0.1 11 5.0 0.0 2.4 2 0 0 2 2 2 0 NB-ARC domain AAA_17 PF13207.6 gi|121637685|ref|YP_977908.1| - 0.21 12.0 0.5 21 5.6 0.2 2.5 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|121637685|ref|YP_977908.1| - 0.21 10.8 1.4 4.4 6.5 0.1 2.6 2 0 0 2 2 2 0 Zeta toxin NTPase_1 PF03266.15 gi|121637685|ref|YP_977908.1| - 0.24 11.3 4.1 3.5 7.5 0.2 3.2 3 0 0 3 3 3 0 NTPase Septin PF00735.18 gi|121637685|ref|YP_977908.1| - 0.25 10.6 1.4 9 5.5 0.0 2.8 3 0 0 3 3 3 0 Septin TsaE PF02367.17 gi|121637685|ref|YP_977908.1| - 0.26 11.3 0.3 5.7 7.0 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Yip1 PF04893.17 gi|121637685|ref|YP_977908.1| - 0.37 10.5 4.6 0.73 9.5 4.6 1.4 1 0 0 1 1 1 0 Yip1 domain AAA_28 PF13521.6 gi|121637685|ref|YP_977908.1| - 0.69 10.1 5.5 10 6.3 0.3 3.1 3 0 0 3 3 3 0 AAA domain DUF853 PF05872.12 gi|121637685|ref|YP_977908.1| - 5.2 5.6 6.4 6.5 5.2 0.0 3.0 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF853) p450 PF00067.22 gi|121637686|ref|YP_977909.1| - 1.9e-19 69.8 0.0 2.4e-09 36.5 0.0 3.1 2 1 0 2 2 2 2 Cytochrome P450 TetR_C_31 PF17940.1 gi|121637686|ref|YP_977909.1| - 3.1 8.0 8.7 0.35 11.1 0.2 3.1 4 0 0 4 4 4 0 Tetracyclin repressor-like, C-terminal domain Fer4_15 PF13459.6 gi|121637687|ref|YP_977910.1| - 1.6e-12 47.9 0.1 1.9e-12 47.7 0.1 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|121637687|ref|YP_977910.1| - 3.2e-09 37.2 0.1 4.1e-09 36.8 0.1 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_19 PF06902.11 gi|121637687|ref|YP_977910.1| - 0.026 14.6 0.0 0.033 14.3 0.0 1.2 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_6 PF12837.7 gi|121637687|ref|YP_977910.1| - 0.22 11.7 2.3 10 6.4 0.1 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain PPE PF00823.19 gi|121637688|ref|YP_977911.1| - 7e-62 208.2 28.4 7e-62 208.2 28.4 2.2 3 0 0 3 3 3 1 PPE family PE_PPE_C PF12484.8 gi|121637688|ref|YP_977911.1| - 1.5e-17 64.3 3.9 1.5e-17 64.3 3.9 4.3 4 2 1 5 5 5 1 Polymorphic PE/PPE proteins C terminal PE PF00934.20 gi|121637689|ref|YP_977912.1| - 8.6e-35 118.9 21.6 1.1e-34 118.7 21.6 1.1 1 0 0 1 1 1 1 PE family PPE PF00823.19 gi|121637690|ref|YP_977913.1| - 5.9e-64 214.9 34.2 5.9e-64 214.9 34.2 2.0 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121637690|ref|YP_977913.1| - 1.5e-19 70.6 17.3 1.5e-19 70.6 17.3 5.4 3 1 1 4 4 4 1 Polymorphic PE/PPE proteins C terminal RIFIN PF02009.16 gi|121637690|ref|YP_977913.1| - 0.33 10.8 2.5 0.48 10.3 2.5 1.2 1 0 0 1 1 1 0 Rifin PPE PF00823.19 gi|121637691|ref|YP_977914.1| - 3.5e-62 209.2 28.4 6.4e-62 208.3 28.4 1.4 1 0 0 1 1 1 1 PPE family PE_PPE_C PF12484.8 gi|121637691|ref|YP_977914.1| - 2.9e-17 63.3 5.2 2.9e-17 63.3 5.2 4.1 4 1 1 5 5 5 1 Polymorphic PE/PPE proteins C terminal PE PF00934.20 gi|121637692|ref|YP_977915.1| - 2.7e-34 117.4 23.9 3.3e-34 117.1 23.9 1.1 1 0 0 1 1 1 1 PE family WXG100 PF06013.12 gi|121637693|ref|YP_977916.1| - 4.5e-20 71.7 3.7 5.1e-20 71.5 3.7 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG DUF5082 PF16888.5 gi|121637693|ref|YP_977916.1| - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) WXG100 PF06013.12 gi|121637694|ref|YP_977917.1| - 1.3e-14 54.2 2.5 1.5e-14 54.0 2.5 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Nup214_FG PF18617.1 gi|121637694|ref|YP_977917.1| - 0.035 14.6 0.0 0.084 13.4 0.0 1.6 1 0 0 1 1 1 0 Nucleoporin Nup214 phenylalanine-glycine (FG) domain ESX-1_EspG PF14011.6 gi|121637695|ref|YP_977918.1| - 3.1e-50 171.1 7.3 3.5e-50 170.9 7.3 1.0 1 0 0 1 1 1 1 EspG family YukD PF08817.10 gi|121637696|ref|YP_977919.1| - 9.7e-13 48.6 0.4 2.6e-12 47.2 0.4 1.8 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD PG_isomerase_N PF18353.1 gi|121637696|ref|YP_977919.1| - 0.028 14.8 0.7 0.028 14.8 0.7 2.0 2 0 0 2 2 2 0 Phosphoglucose isomerase N-terminal domain PigN PF04987.14 gi|121637696|ref|YP_977919.1| - 8.9 5.0 18.8 0.12 11.2 4.5 2.2 2 0 0 2 2 2 0 Phosphatidylinositolglycan class N (PIG-N) Peptidase_S8 PF00082.22 gi|121637697|ref|YP_977920.1| - 2.3e-24 86.2 4.2 6.3e-20 71.6 0.1 2.9 2 2 0 2 2 2 2 Subtilase family EccE PF11203.8 gi|121637698|ref|YP_977921.1| - 1.9e-23 82.6 2.5 1.9e-23 82.6 2.5 1.8 2 0 0 2 2 2 1 Putative type VII ESX secretion system translocon, EccE ORF_12_N PF18042.1 gi|121637698|ref|YP_977921.1| - 0.0082 16.5 0.2 0.022 15.1 0.2 1.6 1 0 0 1 1 1 1 ORF 12 gene product N-terminal AAA PF00004.29 gi|121637699|ref|YP_977922.1| - 6.3e-17 62.2 0.0 1.3e-16 61.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_6 PF17866.1 gi|121637699|ref|YP_977922.1| - 4.8e-12 45.9 0.2 1.6e-11 44.2 0.2 2.0 1 0 0 1 1 1 1 AAA lid domain TPR_16 PF13432.6 gi|121637699|ref|YP_977922.1| - 6.9e-07 29.8 12.2 0.00094 19.8 0.8 4.4 3 1 0 3 3 3 2 Tetratricopeptide repeat AAA_5 PF07728.14 gi|121637699|ref|YP_977922.1| - 6.3e-06 26.2 0.0 1.5e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) TPR_12 PF13424.6 gi|121637699|ref|YP_977922.1| - 2.5e-05 24.5 3.2 0.0051 17.1 0.3 3.4 3 1 0 3 3 2 1 Tetratricopeptide repeat AAA_16 PF13191.6 gi|121637699|ref|YP_977922.1| - 7.7e-05 23.1 0.0 0.00037 20.9 0.0 2.2 1 0 0 1 1 1 1 AAA ATPase domain TPR_2 PF07719.17 gi|121637699|ref|YP_977922.1| - 0.00015 21.6 7.0 0.13 12.5 0.0 5.4 6 0 0 6 6 4 1 Tetratricopeptide repeat AAA_22 PF13401.6 gi|121637699|ref|YP_977922.1| - 0.00058 20.1 0.1 0.0024 18.1 0.1 2.1 1 1 0 1 1 1 1 AAA domain TPR_19 PF14559.6 gi|121637699|ref|YP_977922.1| - 0.00095 19.6 3.8 3.1 8.4 0.4 4.1 3 1 0 3 3 3 1 Tetratricopeptide repeat Mg_chelatase PF01078.21 gi|121637699|ref|YP_977922.1| - 0.0032 16.9 0.0 0.0062 16.0 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|121637699|ref|YP_977922.1| - 0.0059 16.3 0.2 1.1 8.9 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_33 PF13671.6 gi|121637699|ref|YP_977922.1| - 0.0065 16.6 0.1 0.02 15.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_11 PF13086.6 gi|121637699|ref|YP_977922.1| - 0.0075 16.1 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 gi|121637699|ref|YP_977922.1| - 0.0082 16.3 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|121637699|ref|YP_977922.1| - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RuvB_N PF05496.12 gi|121637699|ref|YP_977922.1| - 0.012 15.4 0.1 0.029 14.1 0.1 1.8 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|121637699|ref|YP_977922.1| - 0.015 15.9 0.0 0.039 14.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|121637699|ref|YP_977922.1| - 0.019 15.1 0.0 0.07 13.2 0.0 1.8 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.6 gi|121637699|ref|YP_977922.1| - 0.022 15.1 0.4 0.065 13.6 0.4 1.8 1 1 0 1 1 1 0 AAA domain TPR_6 PF13174.6 gi|121637699|ref|YP_977922.1| - 0.024 15.2 2.7 0.087 13.5 0.0 3.3 2 0 0 2 2 2 0 Tetratricopeptide repeat IstB_IS21 PF01695.17 gi|121637699|ref|YP_977922.1| - 0.025 14.3 0.0 0.061 13.1 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein Methyltransf_11 PF08241.12 gi|121637699|ref|YP_977922.1| - 0.034 14.8 0.2 9.9 6.9 0.1 2.8 2 0 0 2 2 2 0 Methyltransferase domain TPR_1 PF00515.28 gi|121637699|ref|YP_977922.1| - 0.052 13.4 0.0 4 7.4 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat AAA_24 PF13479.6 gi|121637699|ref|YP_977922.1| - 0.052 13.3 0.0 0.099 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain TPR_3 PF07720.12 gi|121637699|ref|YP_977922.1| - 0.058 13.4 1.3 0.16 12.0 1.3 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat ResIII PF04851.15 gi|121637699|ref|YP_977922.1| - 0.062 13.3 0.1 6.5 6.7 0.1 2.5 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit DUF815 PF05673.13 gi|121637699|ref|YP_977922.1| - 0.072 12.2 0.0 0.15 11.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TPR_8 PF13181.6 gi|121637699|ref|YP_977922.1| - 0.099 12.9 0.3 1.8 9.0 0.0 3.2 3 0 0 3 3 2 0 Tetratricopeptide repeat TrwB_AAD_bind PF10412.9 gi|121637699|ref|YP_977922.1| - 0.13 11.2 0.0 0.26 10.1 0.0 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain TIP49 PF06068.13 gi|121637699|ref|YP_977922.1| - 0.17 11.0 0.1 0.31 10.2 0.1 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_28 PF13521.6 gi|121637699|ref|YP_977922.1| - 0.21 11.8 4.0 0.25 11.6 0.1 2.9 3 0 0 3 3 3 0 AAA domain TPR_10 PF13374.6 gi|121637699|ref|YP_977922.1| - 0.84 9.6 7.1 14 5.7 0.1 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|121637699|ref|YP_977922.1| - 8.6 7.5 20.2 5.8 8.0 0.1 5.6 4 1 1 5 5 5 0 Tetratricopeptide repeat PE-PPE PF08237.11 gi|121637701|ref|YP_977924.1| - 7.1e-77 258.0 5.0 7.1e-77 258.0 5.0 1.8 2 0 0 2 2 2 1 PE-PPE domain PPE PF00823.19 gi|121637701|ref|YP_977924.1| - 1.5e-55 187.6 27.0 1.5e-55 187.6 27.0 1.8 2 0 0 2 2 2 1 PPE family PPE PF00823.19 gi|121637702|ref|YP_977925.1| - 4e-64 215.5 24.6 4e-64 215.5 24.6 2.6 3 1 0 3 3 3 1 PPE family PE_PPE_C PF12484.8 gi|121637702|ref|YP_977925.1| - 3.8e-08 34.1 26.1 3.8e-08 34.1 26.1 5.4 2 2 0 2 2 2 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121637703|ref|YP_977926.1| - 3e-63 212.6 31.1 3e-63 212.6 31.1 2.8 3 0 0 3 3 3 1 PPE family PE_PPE_C PF12484.8 gi|121637703|ref|YP_977926.1| - 4.8e-11 43.4 19.0 4.8e-11 43.4 19.0 4.7 2 1 1 3 3 3 1 Polymorphic PE/PPE proteins C terminal WXG100 PF06013.12 gi|121637703|ref|YP_977926.1| - 0.055 13.7 6.4 0.26 11.5 6.4 2.2 1 0 0 1 1 1 0 Proteins of 100 residues with WXG PE PF00934.20 gi|121637705|ref|YP_977928.1| - 1.7e-29 101.9 12.9 1.9e-29 101.8 12.9 1.0 1 0 0 1 1 1 1 PE family DUF732 PF05305.14 gi|121637706|ref|YP_977929.1| - 1.2e-25 89.7 0.0 1.4e-25 89.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF732) PE PF00934.20 gi|121637708|ref|YP_977931.1| - 6.4e-27 93.7 19.6 7.2e-27 93.6 19.6 1.0 1 0 0 1 1 1 1 PE family PPE PF00823.19 gi|121637709|ref|YP_977932.1| - 9.3e-63 211.0 33.1 9.3e-63 211.0 33.1 2.1 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121637709|ref|YP_977932.1| - 5.7e-21 75.2 16.5 5.7e-21 75.2 16.5 6.1 3 1 1 4 4 4 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121637710|ref|YP_977933.1| - 3.4e-64 215.7 24.2 3.4e-64 215.7 24.2 2.9 3 2 1 4 4 4 1 PPE family PE_PPE_C PF12484.8 gi|121637710|ref|YP_977933.1| - 5.2e-09 36.9 15.4 5.2e-09 36.9 15.4 5.5 1 1 2 3 3 3 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121637711|ref|YP_977934.1| - 2.2e-61 206.6 25.3 2.6e-61 206.3 25.3 1.1 1 0 0 1 1 1 1 PPE family Nucleoporin_FG PF13634.6 gi|121637711|ref|YP_977934.1| - 0.03 15.2 2.0 0.03 15.2 2.0 1.7 2 0 0 2 2 2 0 Nucleoporin FG repeat region DUF732 PF05305.14 gi|121637712|ref|YP_977935.1| - 2e-24 85.8 3.8 2.4e-24 85.5 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF732) MgtC PF02308.16 gi|121637713|ref|YP_977936.1| - 3.1e-32 111.5 13.1 4.5e-32 111.0 13.1 1.2 1 0 0 1 1 1 1 MgtC family Pyr_redox_2 PF07992.14 gi|121637714|ref|YP_977937.1| - 2.1e-50 171.6 1.1 2.5e-50 171.4 1.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121637714|ref|YP_977937.1| - 6.7e-08 33.0 0.6 2.6e-05 24.7 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121637714|ref|YP_977937.1| - 7.2e-08 32.4 11.3 0.04 13.5 0.4 4.1 3 1 1 4 4 4 3 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|121637714|ref|YP_977937.1| - 1.8e-05 24.8 5.4 0.062 13.3 0.1 4.1 3 1 1 4 4 4 2 FAD-NAD(P)-binding GIDA PF01134.22 gi|121637714|ref|YP_977937.1| - 0.0016 17.6 4.7 0.45 9.5 0.2 3.5 3 0 0 3 3 3 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|121637714|ref|YP_977937.1| - 0.0027 16.8 8.2 0.005 16.0 1.0 3.3 4 0 0 4 4 4 1 FAD binding domain NAD_binding_8 PF13450.6 gi|121637714|ref|YP_977937.1| - 0.0056 16.9 2.8 1.1 9.6 0.1 2.9 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|121637714|ref|YP_977937.1| - 0.03 13.0 3.0 0.72 8.5 0.1 3.3 4 0 0 4 4 4 0 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|121637714|ref|YP_977937.1| - 0.044 13.1 5.4 2.2 7.6 0.6 2.4 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 gi|121637714|ref|YP_977937.1| - 0.052 12.8 0.2 0.28 10.4 0.0 1.9 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|121637714|ref|YP_977937.1| - 0.5 9.7 4.0 0.42 9.9 0.5 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase DUF4189 PF13827.6 gi|121637715|ref|YP_977938.1| - 1e-15 58.0 3.3 1.4e-15 57.6 3.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4189) FA_hydroxylase PF04116.13 gi|121637716|ref|YP_977939.1| - 3.9e-25 88.7 8.9 3.9e-25 88.7 8.9 1.6 1 1 1 2 2 2 1 Fatty acid hydroxylase superfamily Trypsin PF00089.26 gi|121637717|ref|YP_977940.1| - 0.01 15.6 0.6 2 8.1 0.4 2.1 2 0 0 2 2 2 0 Trypsin TetR_C_33 PF13305.6 gi|121637718|ref|YP_977941.1| - 1.1e-24 87.1 1.2 1.8e-24 86.5 0.3 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121637718|ref|YP_977941.1| - 3e-07 30.1 0.1 1.6e-06 27.8 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 gi|121637718|ref|YP_977941.1| - 0.0012 18.6 0.1 0.0032 17.2 0.1 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|121637718|ref|YP_977941.1| - 0.0019 18.0 0.1 0.0043 16.8 0.1 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|121637718|ref|YP_977941.1| - 0.018 14.8 0.1 0.042 13.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain FAD_binding_2 PF00890.24 gi|121637720|ref|YP_977943.1| - 2.9e-51 174.9 3.5 3.5e-51 174.6 3.5 1.1 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|121637720|ref|YP_977943.1| - 9.1e-12 45.2 5.4 3.2e-11 43.4 5.4 1.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|121637720|ref|YP_977943.1| - 1.1e-08 34.9 1.1 2.2e-07 30.6 1.7 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121637720|ref|YP_977943.1| - 1.9e-07 30.2 5.7 0.0075 15.0 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_2 PF07992.14 gi|121637720|ref|YP_977943.1| - 1.1e-06 28.2 0.9 5.1e-05 22.6 0.0 2.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121637720|ref|YP_977943.1| - 0.015 14.6 2.2 0.015 14.6 2.2 1.8 2 0 0 2 2 2 0 Thi4 family AlaDh_PNT_C PF01262.21 gi|121637720|ref|YP_977943.1| - 0.063 12.6 3.3 0.12 11.7 3.3 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|121637720|ref|YP_977943.1| - 0.067 12.4 2.5 3.5 6.8 2.3 2.1 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.6 gi|121637720|ref|YP_977943.1| - 0.098 12.9 6.9 0.28 11.4 6.9 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|121637720|ref|YP_977943.1| - 0.48 9.4 12.2 6.4 5.7 9.2 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|121637720|ref|YP_977943.1| - 1.5 9.4 3.3 8.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|121637720|ref|YP_977943.1| - 2.8 7.8 4.0 5.5 6.8 4.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PE PF00934.20 gi|121637721|ref|YP_977944.1| - 3.5e-36 123.4 21.7 5.2e-36 122.9 21.7 1.3 1 0 0 1 1 1 1 PE family ABC_membrane_2 PF06472.15 gi|121637722|ref|YP_977945.1| - 8.4e-99 330.3 1.3 1.3e-98 329.7 1.3 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 SbmA_BacA PF05992.12 gi|121637722|ref|YP_977945.1| - 1.2e-26 93.9 5.0 2.9e-26 92.6 5.0 1.5 1 1 0 1 1 1 1 SbmA/BacA-like family ABC_tran PF00005.27 gi|121637722|ref|YP_977945.1| - 3.3e-15 56.8 0.0 6.8e-15 55.8 0.0 1.6 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|121637722|ref|YP_977945.1| - 7.5e-05 23.2 0.2 0.00018 21.9 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|121637722|ref|YP_977945.1| - 0.00035 20.8 0.0 0.00062 20.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121637722|ref|YP_977945.1| - 0.00084 19.3 0.2 0.0038 17.1 0.0 1.9 2 0 0 2 2 2 1 NACHT domain AAA_29 PF13555.6 gi|121637722|ref|YP_977945.1| - 0.0011 18.7 0.0 0.0025 17.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|121637722|ref|YP_977945.1| - 0.0018 18.0 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121637722|ref|YP_977945.1| - 0.016 14.8 0.0 0.036 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|121637722|ref|YP_977945.1| - 0.018 15.5 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|121637722|ref|YP_977945.1| - 0.046 12.8 0.0 0.078 12.0 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.6 gi|121637722|ref|YP_977945.1| - 0.047 13.9 0.1 0.089 13.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|121637722|ref|YP_977945.1| - 0.048 13.6 0.0 0.081 12.8 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase cobW PF02492.19 gi|121637722|ref|YP_977945.1| - 0.077 12.6 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_21 PF13304.6 gi|121637722|ref|YP_977945.1| - 0.095 12.5 0.1 0.29 10.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system NTPase_1 PF03266.15 gi|121637722|ref|YP_977945.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 gi|121637722|ref|YP_977945.1| - 0.12 13.0 0.0 0.22 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain TPP_enzyme_N PF02776.18 gi|121637723|ref|YP_977946.1| - 6.6e-46 156.1 0.8 5e-45 153.2 1.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|121637723|ref|YP_977946.1| - 9e-31 106.7 0.0 2.1e-30 105.6 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|121637723|ref|YP_977946.1| - 5.5e-21 74.7 0.1 1.5e-20 73.4 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 gi|121637723|ref|YP_977946.1| - 0.086 12.6 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit SecA_DEAD PF07517.14 gi|121637724|ref|YP_977947.1| - 6.9e-82 275.0 0.1 1e-81 274.4 0.1 1.2 1 0 0 1 1 1 1 SecA DEAD-like domain SecA_PP_bind PF01043.20 gi|121637724|ref|YP_977947.1| - 1.2e-21 77.5 0.3 3.9e-21 75.8 0.3 1.9 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SecA_SW PF07516.13 gi|121637724|ref|YP_977947.1| - 1.3e-19 71.1 1.5 3.7e-14 53.2 0.1 2.5 1 1 1 2 2 2 2 SecA Wing and Scaffold domain ResIII PF04851.15 gi|121637724|ref|YP_977947.1| - 0.088 12.8 0.1 0.97 9.4 0.0 2.5 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit CDP-OH_P_transf PF01066.21 gi|121637725|ref|YP_977948.1| - 1.3e-13 51.4 0.3 1.3e-13 51.4 0.3 2.5 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase PIG-Y PF15159.6 gi|121637725|ref|YP_977948.1| - 0.059 14.3 0.5 0.059 14.3 0.5 2.7 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF881 PF05949.12 gi|121637726|ref|YP_977949.1| - 1e-34 119.5 0.0 1.9e-34 118.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF881) DUF1290 PF06947.12 gi|121637727|ref|YP_977950.1| - 2.4e-33 114.1 3.8 3.6e-33 113.5 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1290) DUF1129 PF06570.11 gi|121637727|ref|YP_977950.1| - 0.21 11.1 0.1 0.21 11.1 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) FtsX PF02687.21 gi|121637727|ref|YP_977950.1| - 0.52 10.8 6.7 1 9.8 6.7 1.6 1 1 0 1 1 1 0 FtsX-like permease family HIG_1_N PF04588.13 gi|121637727|ref|YP_977950.1| - 1.1 9.5 0.1 1.1 9.5 0.1 3.0 3 0 0 3 3 3 0 Hypoxia induced protein conserved region CPP1-like PF11833.8 gi|121637727|ref|YP_977950.1| - 5 6.7 6.0 4 7.0 0.5 2.0 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF881 PF05949.12 gi|121637728|ref|YP_977951.1| - 2e-36 125.0 3.1 3.1e-36 124.4 0.3 2.2 2 1 0 2 2 2 1 Bacterial protein of unknown function (DUF881) Mce4_CUP1 PF11887.8 gi|121637728|ref|YP_977951.1| - 0.22 10.9 2.0 0.41 10.1 2.0 1.3 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative GCV_H PF01597.19 gi|121637729|ref|YP_977952.1| - 2.5e-39 133.9 0.0 2.8e-39 133.8 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|121637729|ref|YP_977952.1| - 0.019 14.8 0.0 0.04 13.7 0.0 1.6 2 0 0 2 2 2 0 Biotin-requiring enzyme RnfC_N PF13375.6 gi|121637729|ref|YP_977952.1| - 0.05 13.6 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain FHA PF00498.26 gi|121637730|ref|YP_977953.1| - 2.3e-19 69.5 0.1 3.2e-19 69.1 0.1 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|121637730|ref|YP_977953.1| - 5e-18 65.2 0.0 7.5e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PBP_like PF12727.7 gi|121637730|ref|YP_977953.1| - 0.014 14.5 0.0 0.018 14.2 0.0 1.2 1 0 0 1 1 1 0 PBP superfamily domain MerR PF00376.23 gi|121637731|ref|YP_977954.1| - 1.1e-10 41.1 0.0 2.6e-10 39.9 0.0 1.8 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.6 gi|121637731|ref|YP_977954.1| - 1.6e-08 34.5 0.0 2.1e-07 30.9 0.0 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein DNase-RNase PF02577.14 gi|121637732|ref|YP_977955.1| - 4.6e-47 158.9 0.0 5.5e-47 158.6 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease MerR_1 PF13411.6 gi|121637733|ref|YP_977956.1| - 5.4e-13 48.8 0.0 8.4e-13 48.2 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 gi|121637733|ref|YP_977956.1| - 0.019 14.7 0.0 0.051 13.4 0.0 1.8 1 0 0 1 1 1 0 MerR family regulatory protein DUF4872 PF16169.5 gi|121637734|ref|YP_977957.1| - 0.076 12.8 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4872) GDC-P PF02347.16 gi|121637735|ref|YP_977958.1| - 2.1e-198 659.5 0.0 1.2e-184 614.1 0.0 2.3 3 0 0 3 3 3 2 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|121637735|ref|YP_977958.1| - 1.2e-07 31.1 0.1 2.1e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|121637735|ref|YP_977958.1| - 0.00015 21.1 0.2 0.00041 19.7 0.0 1.8 2 0 0 2 2 2 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|121637735|ref|YP_977958.1| - 0.0045 15.6 0.2 1.2 7.6 0.2 2.7 2 1 0 2 2 2 2 Cys/Met metabolism PLP-dependent enzyme SepSecS PF05889.13 gi|121637735|ref|YP_977958.1| - 0.17 10.5 0.0 0.29 9.8 0.0 1.2 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Abhydrolase_1 PF00561.20 gi|121637736|ref|YP_977959.1| - 8.6e-27 94.4 0.1 1.3e-20 74.2 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121637736|ref|YP_977959.1| - 5.1e-17 63.2 6.0 6.2e-17 62.9 6.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121637736|ref|YP_977959.1| - 1.6e-08 34.1 0.0 2.2e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|121637736|ref|YP_977959.1| - 0.03 13.0 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Ndr family Abhydrolase_6 PF12697.7 gi|121637737|ref|YP_977960.1| - 5.2e-17 63.2 9.8 6.6e-17 62.8 9.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121637737|ref|YP_977960.1| - 9.1e-15 55.0 0.0 2.3e-13 50.4 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121637737|ref|YP_977960.1| - 6.2e-08 32.2 0.0 8.6e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF900 PF05990.12 gi|121637737|ref|YP_977960.1| - 0.23 11.0 0.0 0.35 10.3 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Peptidase_S15 PF02129.18 gi|121637738|ref|YP_977961.1| - 4.6e-76 256.0 0.4 5.9e-76 255.6 0.4 1.1 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) PepX_C PF08530.10 gi|121637738|ref|YP_977961.1| - 3.5e-40 138.3 0.0 5.1e-40 137.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Hydrolase_4 PF12146.8 gi|121637738|ref|YP_977961.1| - 0.0053 16.1 0.0 0.0079 15.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 gi|121637738|ref|YP_977961.1| - 0.11 11.9 0.1 0.18 11.3 0.1 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family SBP_bac_11 PF13531.6 gi|121637739|ref|YP_977962.1| - 4.8e-17 62.5 10.5 4.8e-17 62.5 10.5 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein VWA_3 PF13768.6 gi|121637739|ref|YP_977962.1| - 0.12 12.4 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain Consortin_C PF15281.6 gi|121637739|ref|YP_977962.1| - 0.2 11.6 0.1 0.4 10.7 0.1 1.4 1 0 0 1 1 1 0 Consortin C-terminus DUF3040 PF11239.8 gi|121637739|ref|YP_977962.1| - 1.2 9.5 4.5 3.6 7.9 0.7 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) Malate_synthase PF01274.22 gi|121637740|ref|YP_977963.1| - 6e-190 632.0 0.0 6.8e-190 631.8 0.0 1.0 1 0 0 1 1 1 1 Malate synthase PIN PF01850.21 gi|121637741|ref|YP_977964.1| - 4.8e-17 62.6 0.1 5.4e-17 62.4 0.1 1.0 1 0 0 1 1 1 1 PIN domain MMS22L_C PF14911.6 gi|121637741|ref|YP_977964.1| - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, C-terminal RHH_1 PF01402.21 gi|121637742|ref|YP_977965.1| - 0.00054 19.8 3.4 0.00054 19.8 3.4 2.2 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family RHH_4 PF13467.6 gi|121637742|ref|YP_977965.1| - 0.0014 18.5 3.2 0.0022 17.8 1.2 2.0 1 1 1 2 2 2 1 Ribbon-helix-helix domain DUF2383 PF09537.10 gi|121637742|ref|YP_977965.1| - 0.0069 16.7 0.2 0.0084 16.4 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) MatP_C PF17414.2 gi|121637742|ref|YP_977965.1| - 0.11 12.6 1.1 0.28 11.4 0.3 1.9 1 1 1 2 2 2 0 MatP C-terminal ribbon-helix-helix domain DEDD_Tnp_IS110 PF01548.17 gi|121637742|ref|YP_977965.1| - 0.18 11.7 0.4 0.24 11.3 0.4 1.2 1 0 0 1 1 1 0 Transposase PSK_trans_fac PF07704.11 gi|121637742|ref|YP_977965.1| - 0.9 10.3 7.4 1.9 9.3 7.4 1.6 1 1 0 1 1 1 0 Rv0623-like transcription factor PE PF00934.20 gi|121637743|ref|YP_977966.1| - 4.9e-35 119.7 22.8 4.9e-35 119.7 22.8 2.6 3 0 0 3 3 3 1 PE family DUF21 PF01595.20 gi|121637744|ref|YP_977967.1| - 4.8e-40 137.1 4.4 6.4e-40 136.7 4.4 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 gi|121637744|ref|YP_977967.1| - 1.9e-13 50.6 1.1 7.4e-06 26.3 0.4 2.5 2 0 0 2 2 2 2 CBS domain Silic_transp PF03842.13 gi|121637744|ref|YP_977967.1| - 0.064 11.5 0.5 0.089 11.1 0.5 1.2 1 0 0 1 1 1 0 Silicon transporter DUF21 PF01595.20 gi|121637745|ref|YP_977968.1| - 7.7e-35 120.2 1.8 1.3e-34 119.5 1.8 1.3 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|121637745|ref|YP_977968.1| - 7.3e-20 70.8 0.0 2.2e-19 69.2 0.0 1.9 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|121637745|ref|YP_977968.1| - 2.2e-10 40.8 0.4 0.00044 20.6 0.0 2.7 2 0 0 2 2 2 2 CBS domain IMPDH PF00478.25 gi|121637746|ref|YP_977969.1| - 1.9e-102 342.8 0.1 4.4e-102 341.6 0.1 1.5 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|121637746|ref|YP_977969.1| - 8.7e-10 38.9 2.0 3.7e-05 24.1 0.2 2.7 2 0 0 2 2 2 2 CBS domain His_biosynth PF00977.21 gi|121637746|ref|YP_977969.1| - 1.5e-05 24.5 0.8 0.0015 18.1 0.0 2.5 2 1 1 3 3 3 2 Histidine biosynthesis protein FMN_dh PF01070.18 gi|121637746|ref|YP_977969.1| - 8.1e-05 21.8 10.9 0.0023 17.0 10.6 2.8 2 1 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|121637746|ref|YP_977969.1| - 0.00013 21.5 12.9 0.0004 19.9 0.0 3.2 3 0 0 3 3 3 2 Nitronate monooxygenase Glu_synthase PF01645.17 gi|121637746|ref|YP_977969.1| - 0.032 13.4 2.4 0.032 13.4 1.2 1.5 1 1 1 2 2 2 0 Conserved region in glutamate synthase Aldolase PF01081.19 gi|121637746|ref|YP_977969.1| - 0.12 11.8 2.7 0.33 10.3 1.4 2.1 2 0 0 2 2 2 0 KDPG and KHG aldolase 6PGD PF00393.19 gi|121637747|ref|YP_977970.1| - 2.2e-89 299.7 0.0 3.1e-89 299.2 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|121637747|ref|YP_977970.1| - 2.4e-44 151.3 0.0 3.9e-44 150.6 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|121637747|ref|YP_977970.1| - 0.06 13.4 0.0 0.13 12.3 0.0 1.5 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Peptidase_M48 PF01435.18 gi|121637748|ref|YP_977971.1| - 1.6e-10 41.1 0.6 9e-10 38.6 0.1 2.1 1 1 1 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|121637748|ref|YP_977971.1| - 1e-05 24.9 0.3 2.4e-05 23.7 0.3 1.6 1 1 0 1 1 1 1 BlaR1 peptidase M56 Penicillinase_R PF03965.16 gi|121637749|ref|YP_977972.1| - 1.2e-29 103.0 0.1 1.3e-29 102.8 0.1 1.0 1 0 0 1 1 1 1 Penicillinase repressor TrmB PF01978.19 gi|121637749|ref|YP_977972.1| - 0.0027 17.6 0.0 0.005 16.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GntR PF00392.21 gi|121637749|ref|YP_977972.1| - 1.2 8.8 4.5 3.5 7.3 0.9 2.9 2 1 1 3 3 3 0 Bacterial regulatory proteins, gntR family 4HBT PF03061.22 gi|121637750|ref|YP_977973.1| - 6.5e-16 58.4 0.4 8.7e-16 58.0 0.4 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|121637750|ref|YP_977973.1| - 1e-05 25.7 0.0 1.4e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 gi|121637750|ref|YP_977973.1| - 0.00014 22.2 0.1 0.00016 22.0 0.1 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Urease_gamma PF00547.18 gi|121637751|ref|YP_977974.1| - 8.9e-48 160.7 0.2 9.8e-48 160.5 0.2 1.0 1 0 0 1 1 1 1 Urease, gamma subunit Urease_beta PF00699.20 gi|121637752|ref|YP_977975.1| - 1.8e-35 120.9 0.0 1.9e-35 120.8 0.0 1.0 1 0 0 1 1 1 1 Urease beta subunit Amidohydro_1 PF01979.20 gi|121637753|ref|YP_977976.1| - 5.1e-69 233.2 1.1 7.2e-69 232.7 1.1 1.2 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 gi|121637753|ref|YP_977976.1| - 5.7e-53 178.4 0.9 1e-52 177.5 0.9 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 gi|121637753|ref|YP_977976.1| - 1.6e-06 27.9 6.4 9.1e-06 25.4 1.7 2.3 1 1 1 2 2 2 2 Amidohydrolase family UreF PF01730.16 gi|121637754|ref|YP_977977.1| - 4.3e-13 50.0 2.3 6.8e-13 49.4 2.3 1.3 1 0 0 1 1 1 1 UreF TetR_C_7 PF14246.6 gi|121637754|ref|YP_977977.1| - 0.029 14.4 0.4 0.2 11.7 0.1 2.3 2 0 0 2 2 2 0 AefR-like transcriptional repressor, C-terminal domain cobW PF02492.19 gi|121637755|ref|YP_977978.1| - 7.9e-35 120.0 0.1 9.6e-35 119.8 0.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|121637755|ref|YP_977978.1| - 3.4e-05 23.0 1.4 0.09 11.7 0.4 2.0 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|121637755|ref|YP_977978.1| - 0.0016 18.9 0.0 0.0026 18.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|121637755|ref|YP_977978.1| - 0.0062 17.1 0.0 0.011 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|121637755|ref|YP_977978.1| - 0.011 15.8 0.0 0.054 13.6 0.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF463 PF04317.12 gi|121637755|ref|YP_977978.1| - 0.037 13.0 0.0 0.048 12.6 0.0 1.2 1 0 0 1 1 1 0 YcjX-like family, DUF463 AAA_5 PF07728.14 gi|121637755|ref|YP_977978.1| - 0.044 13.8 0.0 0.076 13.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|121637755|ref|YP_977978.1| - 0.064 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 gi|121637755|ref|YP_977978.1| - 0.079 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|121637755|ref|YP_977978.1| - 0.082 12.8 0.1 7.5 6.5 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|121637755|ref|YP_977978.1| - 0.086 13.3 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|121637755|ref|YP_977978.1| - 0.14 12.6 0.0 0.17 12.4 0.0 1.3 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 gi|121637755|ref|YP_977978.1| - 0.24 11.8 0.0 0.5 10.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase UreD PF01774.17 gi|121637756|ref|YP_977979.1| - 2.2e-15 57.2 0.9 2.6e-15 56.9 0.9 1.2 1 0 0 1 1 1 1 UreD urease accessory protein Pyr_redox_2 PF07992.14 gi|121637757|ref|YP_977980.1| - 3.7e-59 200.4 0.8 4.5e-59 200.1 0.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121637757|ref|YP_977980.1| - 1e-12 48.4 1.2 3.5e-07 30.7 0.4 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121637757|ref|YP_977980.1| - 4e-07 29.5 1.0 0.02 14.0 0.1 4.1 3 1 1 4 4 4 3 Glucose inhibited division protein A DAO PF01266.24 gi|121637757|ref|YP_977980.1| - 0.0002 21.1 4.8 0.091 12.3 0.1 3.7 4 0 0 4 4 4 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121637757|ref|YP_977980.1| - 0.00067 19.8 1.5 0.016 15.4 0.0 3.1 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|121637757|ref|YP_977980.1| - 0.0025 17.1 0.0 1 8.5 0.0 2.8 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|121637757|ref|YP_977980.1| - 0.0056 16.0 2.0 0.39 9.9 0.0 2.4 2 1 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|121637757|ref|YP_977980.1| - 0.012 14.7 0.2 0.054 12.6 0.0 2.0 2 0 0 2 2 2 0 FAD binding domain NAD_binding_9 PF13454.6 gi|121637757|ref|YP_977980.1| - 0.052 13.5 0.2 9.9 6.1 0.0 2.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding Thi4 PF01946.17 gi|121637757|ref|YP_977980.1| - 0.058 12.6 0.2 0.98 8.6 0.0 2.3 2 0 0 2 2 2 0 Thi4 family DUF732 PF05305.14 gi|121637757|ref|YP_977980.1| - 0.071 13.5 0.0 0.2 12.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF732) NAD_binding_7 PF13241.6 gi|121637757|ref|YP_977980.1| - 0.13 12.7 0.1 0.46 10.9 0.0 2.0 2 0 0 2 2 2 0 Putative NAD(P)-binding ApbA PF02558.16 gi|121637757|ref|YP_977980.1| - 0.18 11.4 1.0 2.3 7.9 0.0 2.6 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 gi|121637757|ref|YP_977980.1| - 0.55 8.9 2.4 3.7 6.2 0.0 3.0 4 0 0 4 4 4 0 HI0933-like protein Bac_luciferase PF00296.20 gi|121637758|ref|YP_977981.1| - 3e-49 168.2 4.2 5.7e-47 160.7 1.3 2.0 1 1 1 2 2 2 2 Luciferase-like monooxygenase adh_short_C2 PF13561.6 gi|121637759|ref|YP_977982.1| - 2.9e-19 69.6 0.2 1.5e-17 63.9 0.2 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637759|ref|YP_977982.1| - 8.5e-14 51.5 0.1 1.3e-13 50.8 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 gi|121637759|ref|YP_977982.1| - 0.0014 18.8 0.1 0.0053 17.0 0.1 1.8 2 0 0 2 2 2 1 TrkA-N domain KR PF08659.10 gi|121637759|ref|YP_977982.1| - 0.036 14.0 0.0 0.069 13.1 0.0 1.5 1 0 0 1 1 1 0 KR domain Epimerase PF01370.21 gi|121637759|ref|YP_977982.1| - 0.042 13.3 0.0 0.053 13.0 0.0 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family SBP_bac_11 PF13531.6 gi|121637760|ref|YP_977983.1| - 1.5e-43 149.2 6.2 1.9e-43 148.9 6.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|121637760|ref|YP_977983.1| - 1.5e-20 74.4 1.1 2.5e-19 70.4 1.1 2.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|121637760|ref|YP_977983.1| - 3.3e-06 26.4 0.4 7.3e-06 25.2 0.4 1.6 1 1 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 gi|121637760|ref|YP_977983.1| - 0.0003 20.5 6.0 0.00053 19.8 6.1 1.5 1 1 0 1 1 1 1 PBP superfamily domain SBP_bac_6 PF13343.6 gi|121637760|ref|YP_977983.1| - 0.011 15.2 0.0 0.55 9.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|121637761|ref|YP_977984.1| - 3.9e-18 65.8 13.9 3.9e-18 65.8 13.9 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|121637762|ref|YP_977985.1| - 5e-32 111.3 0.0 7.2e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|121637762|ref|YP_977985.1| - 1.3e-14 54.3 0.2 4.1e-14 52.6 0.2 2.0 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|121637762|ref|YP_977985.1| - 2.7e-09 37.3 0.1 0.00029 20.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|121637762|ref|YP_977985.1| - 0.0018 17.9 0.1 0.0059 16.3 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain MukB PF04310.12 gi|121637762|ref|YP_977985.1| - 0.0042 16.9 0.1 0.013 15.3 0.0 1.8 2 0 0 2 2 2 1 MukB N-terminal AAA_27 PF13514.6 gi|121637762|ref|YP_977985.1| - 0.0046 16.6 0.0 0.0076 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|121637762|ref|YP_977985.1| - 0.043 13.5 0.3 0.084 12.6 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|121637762|ref|YP_977985.1| - 0.045 14.2 0.0 0.06 13.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|121637762|ref|YP_977985.1| - 0.069 12.6 0.0 1.3 8.4 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|121637762|ref|YP_977985.1| - 0.11 12.2 0.0 0.72 9.5 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain FAP PF07174.11 gi|121637763|ref|YP_977986.1| - 5.7e-141 469.2 46.7 5.7e-141 469.2 46.7 2.0 1 1 1 2 2 2 1 Fibronectin-attachment protein (FAP) MelC1 PF06236.11 gi|121637763|ref|YP_977986.1| - 2.5 8.2 0.0 2.5 8.2 0.0 3.6 3 1 0 3 3 3 0 Tyrosinase co-factor MelC1 Transgly_assoc PF04226.13 gi|121637764|ref|YP_977987.1| - 8.6e-12 45.1 13.4 8.6e-12 45.1 13.4 2.4 2 1 0 2 2 2 1 Transglycosylase associated protein DUF5423 PF17461.2 gi|121637764|ref|YP_977987.1| - 0.73 8.6 3.5 0.76 8.6 3.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5423) FeoB_C PF07664.12 gi|121637764|ref|YP_977987.1| - 7.8 6.3 11.9 3.3 7.5 0.2 3.0 2 1 1 3 3 3 0 Ferrous iron transport protein B C terminus ADH_N PF08240.12 gi|121637765|ref|YP_977988.1| - 1.1e-28 99.3 1.3 1.7e-28 98.7 1.3 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121637765|ref|YP_977988.1| - 3.3e-07 30.3 0.3 1.2e-06 28.5 0.2 1.9 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637765|ref|YP_977988.1| - 0.0036 18.4 0.1 0.0074 17.3 0.0 1.6 1 1 1 2 2 2 1 Zinc-binding dehydrogenase CPBP PF02517.16 gi|121637766|ref|YP_977989.1| - 7.5e-16 58.3 6.9 7.5e-16 58.3 6.9 2.9 1 1 0 2 2 2 1 CPBP intramembrane metalloprotease MOSC PF03473.17 gi|121637767|ref|YP_977990.1| - 7.6e-23 81.0 0.0 1.2e-22 80.4 0.0 1.3 1 0 0 1 1 1 1 MOSC domain 3-alpha PF03475.14 gi|121637767|ref|YP_977990.1| - 0.49 10.3 3.1 0.61 10.0 1.8 1.8 2 0 0 2 2 2 0 3-alpha domain adh_short PF00106.25 gi|121637768|ref|YP_977991.1| - 4.2e-45 153.6 0.1 5.9e-45 153.1 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637768|ref|YP_977991.1| - 1.3e-37 129.6 0.1 1.8e-37 129.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637768|ref|YP_977991.1| - 0.00012 22.0 0.5 0.00085 19.3 0.5 2.0 1 1 0 1 1 1 1 KR domain AIM24 PF01987.17 gi|121637768|ref|YP_977991.1| - 0.043 13.6 0.1 0.11 12.2 0.1 1.7 1 1 0 1 1 1 0 Mitochondrial biogenesis AIM24 Acetyltransf_9 PF13527.7 gi|121637768|ref|YP_977991.1| - 0.061 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ADH_zinc_N PF00107.26 gi|121637768|ref|YP_977991.1| - 0.061 13.3 0.3 0.14 12.1 0.2 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase CoA_transf_3 PF02515.17 gi|121637769|ref|YP_977992.1| - 2.3e-162 540.3 0.7 2.1e-93 313.4 0.1 2.0 2 0 0 2 2 2 2 CoA-transferase family III DeoC PF01791.9 gi|121637769|ref|YP_977992.1| - 0.16 11.5 0.0 4.8 6.7 0.0 2.2 2 0 0 2 2 2 0 DeoC/LacD family aldolase TLP1_add_C PF18313.1 gi|121637770|ref|YP_977993.1| - 3.2e-26 91.1 0.8 6e-26 90.2 0.8 1.5 1 0 0 1 1 1 1 Thiolase-like protein type 1 additional C-terminal domain Thiolase_C PF02803.18 gi|121637770|ref|YP_977993.1| - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain Asp_protease_2 PF13650.6 gi|121637770|ref|YP_977993.1| - 0.14 12.8 0.1 0.73 10.5 0.0 2.2 3 0 0 3 3 3 0 Aspartyl protease NAD_binding_10 PF13460.6 gi|121637771|ref|YP_977994.1| - 2.3e-06 27.6 0.7 2.3e-06 27.6 0.7 2.0 2 0 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 gi|121637771|ref|YP_977994.1| - 0.00041 19.9 1.0 0.0018 17.8 0.1 2.4 3 0 0 3 3 3 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 gi|121637771|ref|YP_977994.1| - 0.0029 17.2 0.3 0.007 15.9 0.3 1.6 1 1 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 gi|121637771|ref|YP_977994.1| - 0.0036 16.4 0.5 0.0069 15.5 0.5 1.5 1 0 0 1 1 1 1 RmlD substrate binding domain Pyr_redox_2 PF07992.14 gi|121637772|ref|YP_977995.1| - 6.1e-65 219.4 0.3 7.9e-65 219.0 0.3 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121637772|ref|YP_977995.1| - 1.2e-20 73.8 1.2 7.8e-18 64.8 0.3 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 gi|121637772|ref|YP_977995.1| - 8e-13 48.8 0.2 6.5e-12 45.9 0.0 2.7 3 0 0 3 3 2 1 Reductase C-terminal Pyr_redox_3 PF13738.6 gi|121637772|ref|YP_977995.1| - 3.8e-09 36.2 0.0 2.9e-08 33.3 0.0 2.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121637772|ref|YP_977995.1| - 1.1e-08 34.3 3.4 0.0094 14.7 0.1 3.7 3 1 1 4 4 4 3 HI0933-like protein Amino_oxidase PF01593.24 gi|121637772|ref|YP_977995.1| - 1.9e-07 30.7 0.2 0.0012 18.2 0.2 2.3 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase DAO PF01266.24 gi|121637772|ref|YP_977995.1| - 1.7e-06 27.8 10.5 0.027 14.1 0.4 4.0 3 1 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121637772|ref|YP_977995.1| - 2.1e-06 27.8 4.3 0.002 18.3 0.3 3.0 3 0 0 3 3 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|121637772|ref|YP_977995.1| - 9.7e-06 24.9 3.7 0.14 11.2 1.2 3.5 3 1 1 4 4 4 3 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|121637772|ref|YP_977995.1| - 0.001 19.0 0.7 0.0019 18.1 0.7 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 gi|121637772|ref|YP_977995.1| - 0.002 18.1 8.5 2.1 8.3 0.3 4.1 3 1 1 4 4 4 1 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|121637772|ref|YP_977995.1| - 0.0036 16.5 0.3 0.42 9.7 0.0 2.8 2 1 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|121637772|ref|YP_977995.1| - 0.0061 15.7 14.5 0.34 10.0 1.4 4.1 2 1 2 4 4 4 2 FAD binding domain 2-Hacid_dh_C PF02826.19 gi|121637772|ref|YP_977995.1| - 0.0078 15.6 0.4 0.018 14.4 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121637772|ref|YP_977995.1| - 0.017 15.5 0.1 0.43 11.0 0.2 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 gi|121637772|ref|YP_977995.1| - 0.044 12.8 4.4 2.6 7.0 0.4 3.0 2 1 0 3 3 3 0 Lycopene cyclase protein UDPG_MGDP_dh_N PF03721.14 gi|121637772|ref|YP_977995.1| - 0.05 13.2 0.2 0.11 12.1 0.1 1.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 gi|121637772|ref|YP_977995.1| - 0.059 12.6 11.5 0.83 8.9 5.8 2.5 2 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|121637772|ref|YP_977995.1| - 0.063 13.5 1.3 0.71 10.1 0.1 2.3 2 0 0 2 2 2 0 TrkA-N domain FAD_binding_3 PF01494.19 gi|121637772|ref|YP_977995.1| - 0.18 11.0 3.5 0.7 9.1 0.4 2.4 2 0 0 2 2 2 0 FAD binding domain F420H2_quin_red PF04075.14 gi|121637774|ref|YP_977997.1| - 3e-39 134.1 0.1 3.4e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase FMN_dh PF01070.18 gi|121637775|ref|YP_977998.1| - 2.3e-123 411.6 0.0 2.7e-123 411.4 0.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|121637775|ref|YP_977998.1| - 0.0021 17.5 1.4 0.0035 16.8 1.4 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 gi|121637775|ref|YP_977998.1| - 0.0023 17.0 1.5 0.049 12.6 0.8 2.5 2 1 1 3 3 3 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|121637775|ref|YP_977998.1| - 0.0038 16.4 0.2 0.006 15.8 0.2 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase DUF1810 PF08837.11 gi|121637776|ref|YP_977999.1| - 1.9e-55 186.4 0.0 2.1e-55 186.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1810) EthD PF07110.11 gi|121637777|ref|YP_978000.1| - 6.1e-06 27.3 0.1 5.9e-05 24.1 0.0 2.1 2 0 0 2 2 2 1 EthD domain MmlI PF09448.10 gi|121637777|ref|YP_978000.1| - 0.087 13.3 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Methylmuconolactone methyl-isomerase RTX_C PF08339.10 gi|121637777|ref|YP_978000.1| - 0.17 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 RTX C-terminal domain Putative_PNPOx PF01243.20 gi|121637778|ref|YP_978001.1| - 1.9e-09 37.6 0.1 3.5e-09 36.7 0.1 1.4 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Ferritin PF00210.24 gi|121637779|ref|YP_978002.1| - 3.2e-35 121.1 3.1 3.6e-35 121.0 3.1 1.0 1 0 0 1 1 1 1 Ferritin-like domain MFS_1 PF07690.16 gi|121637780|ref|YP_978003.1| - 4.8e-34 117.8 36.7 3.4e-33 115.0 36.7 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|121637780|ref|YP_978003.1| - 4.4e-16 58.8 12.6 4.4e-16 58.8 12.6 1.6 2 0 0 2 2 2 1 Sugar (and other) transporter TRI12 PF06609.13 gi|121637780|ref|YP_978003.1| - 7.1e-13 47.8 18.9 1.5e-12 46.8 18.9 1.4 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_1_like PF12832.7 gi|121637780|ref|YP_978003.1| - 2.9e-05 23.1 5.7 5.5e-05 22.2 5.7 1.4 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 gi|121637781|ref|YP_978004.1| - 1.6e-05 24.0 20.8 4e-05 22.7 19.9 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily TRI12 PF06609.13 gi|121637781|ref|YP_978004.1| - 0.0014 17.2 3.4 0.0058 15.1 3.3 1.9 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Gln-synt_C PF00120.24 gi|121637782|ref|YP_978005.1| - 1.2e-65 221.9 0.0 1.7e-65 221.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain R_equi_Vir PF05526.11 gi|121637782|ref|YP_978005.1| - 0.13 12.2 1.5 0.28 11.0 0.9 1.8 2 0 0 2 2 2 0 Rhodococcus equi virulence-associated protein Amidohydro_2 PF04909.14 gi|121637783|ref|YP_978006.1| - 9e-13 48.7 1.7 1.9e-12 47.6 1.7 1.6 1 1 0 1 1 1 1 Amidohydrolase p450 PF00067.22 gi|121637784|ref|YP_978007.1| - 1.3e-32 113.2 0.1 3.9e-28 98.4 0.4 3.0 2 1 0 2 2 2 2 Cytochrome P450 Myco_19_kDa PF05481.12 gi|121637785|ref|YP_978008.1| - 3.5e-28 98.2 0.1 5.2e-28 97.7 0.1 1.3 1 0 0 1 1 1 1 Mycobacterium 19 kDa lipoprotein antigen LPAM_2 PF13627.6 gi|121637785|ref|YP_978008.1| - 2.8 7.9 6.3 0.25 11.2 1.8 1.6 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site adh_short PF00106.25 gi|121637786|ref|YP_978009.1| - 7.3e-44 149.6 0.0 8.9e-44 149.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121637786|ref|YP_978009.1| - 1.2e-33 116.7 0.3 1.4e-33 116.4 0.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121637786|ref|YP_978009.1| - 0.00038 20.4 0.1 0.00071 19.5 0.1 1.4 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 gi|121637786|ref|YP_978009.1| - 0.084 12.8 0.2 0.17 11.7 0.2 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Polyketide_cyc2 PF10604.9 gi|121637787|ref|YP_978010.1| - 4.3e-19 69.2 1.1 5.3e-19 68.9 1.1 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121637787|ref|YP_978010.1| - 1e-11 45.2 0.0 1.2e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Transglycosylas PF06737.14 gi|121637788|ref|YP_978011.1| - 5.9e-34 116.6 7.5 8.8e-34 116.0 7.5 1.3 1 0 0 1 1 1 1 Transglycosylase-like domain SLT PF01464.20 gi|121637788|ref|YP_978011.1| - 0.081 12.6 0.0 0.17 11.5 0.0 1.6 1 1 0 1 1 1 0 Transglycosylase SLT domain CM_2 PF01817.21 gi|121637789|ref|YP_978012.1| - 1.1e-10 41.7 0.2 4.6e-10 39.7 0.1 1.9 2 0 0 2 2 2 1 Chorismate mutase type II Esterase PF00756.20 gi|121637790|ref|YP_978013.1| - 9.8e-75 251.4 0.5 1.1e-74 251.2 0.5 1.0 1 0 0 1 1 1 1 Putative esterase DUF1964 PF09244.10 gi|121637791|ref|YP_978014.1| - 0.14 12.6 0.0 0.62 10.5 0.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF1964) YbgS PF13985.6 gi|121637791|ref|YP_978014.1| - 1.1 9.5 3.4 13 6.1 0.2 2.5 2 0 0 2 2 2 0 YbgS-like protein DUF4389 PF14333.6 gi|121637792|ref|YP_978015.1| - 3.8e-21 74.8 19.2 5.6e-13 48.6 7.6 2.7 2 1 1 3 3 3 2 Domain of unknown function (DUF4389) LCM PF04072.14 gi|121637793|ref|YP_978016.1| - 2.9e-17 63.2 0.0 3.2e-17 63.1 0.0 1.0 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase LCM PF04072.14 gi|121637794|ref|YP_978017.1| - 3.2e-28 98.9 1.9 3.6e-28 98.8 1.9 1.0 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase YceI PF04264.13 gi|121637795|ref|YP_978018.1| - 9.9e-12 45.6 0.0 1.3e-11 45.3 0.0 1.1 1 0 0 1 1 1 1 YceI-like domain Phage_holin_3_6 PF07332.11 gi|121637797|ref|YP_978020.1| - 0.0067 16.5 4.1 0.0088 16.1 4.1 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III MT0933_antitox PF14013.6 gi|121637798|ref|YP_978021.1| - 0.012 16.0 7.9 0.14 12.5 0.6 2.3 1 1 1 2 2 2 0 MT0933-like antitoxin protein DUF2884 PF11101.8 gi|121637798|ref|YP_978021.1| - 0.087 12.3 0.8 2.5 7.5 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2884) NMO PF03060.15 gi|121637799|ref|YP_978022.1| - 3.1e-44 151.7 0.7 1.8e-43 149.2 0.7 1.8 1 1 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|121637799|ref|YP_978022.1| - 4e-06 26.1 4.6 6.7e-06 25.4 4.6 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|121637799|ref|YP_978022.1| - 0.00062 19.1 1.4 0.00091 18.6 1.4 1.3 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|121637799|ref|YP_978022.1| - 0.0072 15.4 1.3 0.015 14.3 1.3 1.7 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 gi|121637799|ref|YP_978022.1| - 0.18 11.2 1.6 0.19 11.1 0.3 1.6 2 0 0 2 2 2 0 Histidine biosynthesis protein ADH_N PF08240.12 gi|121637800|ref|YP_978023.1| - 2e-22 79.1 2.6 2.4e-22 78.9 2.6 1.1 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 gi|121637800|ref|YP_978023.1| - 0.026 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 gi|121637801|ref|YP_978024.1| - 1.3e-20 73.7 0.0 1.8e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637801|ref|YP_978024.1| - 5.4e-07 30.7 0.0 8.7e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|121637801|ref|YP_978024.1| - 4.3e-05 23.1 0.2 8.1e-05 22.2 0.2 1.4 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 gi|121637801|ref|YP_978024.1| - 0.0037 16.6 0.8 0.0037 16.6 0.8 1.5 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain PGF-CTERM PF18204.1 gi|121637801|ref|YP_978024.1| - 0.0064 16.4 2.6 0.018 15.0 2.6 1.9 1 0 0 1 1 1 1 PGF-CTERM motif LCM PF04072.14 gi|121637802|ref|YP_978025.1| - 3.3e-56 190.2 0.0 4.1e-56 189.9 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Tyr_Deacylase PF02580.16 gi|121637803|ref|YP_978026.1| - 5.4e-49 166.4 0.0 6.1e-49 166.3 0.0 1.0 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase SPDY PF03771.16 gi|121637803|ref|YP_978026.1| - 0.05 13.5 0.3 0.12 12.3 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF317) Thiamine_BP PF01910.17 gi|121637804|ref|YP_978027.1| - 1.4e-29 101.8 0.9 1.6e-29 101.7 0.9 1.0 1 0 0 1 1 1 1 Thiamine-binding protein Ykof PF07615.11 gi|121637804|ref|YP_978027.1| - 0.017 15.6 0.0 0.023 15.2 0.0 1.2 1 0 0 1 1 1 0 YKOF-related Family Phage_H_T_join PF05521.11 gi|121637804|ref|YP_978027.1| - 0.024 15.1 0.5 0.03 14.8 0.5 1.1 1 0 0 1 1 1 0 Phage head-tail joining protein DUF4235 PF14019.6 gi|121637804|ref|YP_978027.1| - 0.038 14.1 3.1 0.054 13.6 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4235) Macro PF01661.21 gi|121637805|ref|YP_978028.1| - 6.7e-27 93.9 0.0 9.8e-27 93.3 0.0 1.3 1 0 0 1 1 1 1 Macro domain Guanylate_cyc PF00211.20 gi|121637806|ref|YP_978029.1| - 1.6e-14 53.9 0.3 1.5e-13 50.8 0.3 2.0 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Abhydrolase_1 PF00561.20 gi|121637806|ref|YP_978029.1| - 6.7e-09 35.8 0.0 4.5e-07 29.8 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold CinA PF02464.17 gi|121637807|ref|YP_978030.1| - 3.4e-54 182.6 1.3 5.6e-54 181.9 1.3 1.3 1 0 0 1 1 1 1 Competence-damaged protein MoCF_biosynth PF00994.24 gi|121637807|ref|YP_978030.1| - 3.6e-38 130.4 0.1 3e-36 124.2 0.0 2.4 2 0 0 2 2 2 2 Probable molybdopterin binding domain CinA_KH PF18146.1 gi|121637807|ref|YP_978030.1| - 0.0087 16.2 0.1 0.054 13.7 0.0 2.5 2 1 0 2 2 2 1 Damage-inducible protein CinA KH domain Sugar_tr PF00083.24 gi|121637808|ref|YP_978031.1| - 3e-39 135.2 21.2 2.6e-25 89.2 7.2 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|121637808|ref|YP_978031.1| - 1.8e-35 122.5 39.8 9.3e-26 90.6 17.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|121637808|ref|YP_978031.1| - 1.2e-05 24.8 20.1 7.1e-05 22.3 20.1 2.1 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Phage_holin_4_2 PF04020.13 gi|121637809|ref|YP_978032.1| - 9.7e-30 103.3 19.5 1.1e-29 103.1 19.5 1.0 1 0 0 1 1 1 1 Mycobacterial 4 TMS phage holin, superfamily IV OST3_OST6 PF04756.13 gi|121637809|ref|YP_978032.1| - 1.5 8.1 7.3 6.1 6.1 0.5 2.0 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family STAS PF01740.21 gi|121637810|ref|YP_978033.1| - 2.3e-13 49.8 0.0 2.7e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121637810|ref|YP_978033.1| - 1.3e-05 25.4 0.1 2.3e-05 24.6 0.1 1.4 1 0 0 1 1 1 1 STAS domain DAO PF01266.24 gi|121637811|ref|YP_978034.1| - 3.4e-33 115.7 4.9 3.9e-33 115.5 4.9 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121637811|ref|YP_978034.1| - 5.9e-06 25.6 0.7 8.8e-06 25.0 0.7 1.3 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|121637811|ref|YP_978034.1| - 0.0044 16.2 0.5 0.0062 15.7 0.5 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|121637811|ref|YP_978034.1| - 0.011 15.0 0.3 0.017 14.3 0.3 1.3 1 0 0 1 1 1 0 Thi4 family FAD_binding_3 PF01494.19 gi|121637811|ref|YP_978034.1| - 0.015 14.6 0.1 0.022 14.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain NAD_binding_8 PF13450.6 gi|121637811|ref|YP_978034.1| - 0.025 14.8 0.6 0.057 13.7 0.6 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|121637811|ref|YP_978034.1| - 0.066 11.9 0.5 0.11 11.1 0.5 1.3 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 gi|121637811|ref|YP_978034.1| - 0.12 11.6 0.1 0.18 11.0 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121637811|ref|YP_978034.1| - 0.13 11.5 0.1 0.25 10.6 0.1 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF4262 PF14081.6 gi|121637813|ref|YP_978036.1| - 1.4e-32 112.6 0.1 2e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4262) peroxidase PF00141.23 gi|121637814|ref|YP_978037.1| - 8.9e-88 293.8 0.0 1.3e-47 162.4 0.0 2.3 2 0 0 2 2 2 2 Peroxidase FUR PF01475.19 gi|121637815|ref|YP_978038.1| - 5.9e-18 65.2 0.0 7.1e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family TrmB PF01978.19 gi|121637815|ref|YP_978038.1| - 0.0026 17.6 0.0 0.0047 16.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PASTA PF03793.19 gi|121637815|ref|YP_978038.1| - 0.038 13.8 0.0 0.1 12.4 0.0 1.7 2 0 0 2 2 2 0 PASTA domain HTH_27 PF13463.6 gi|121637815|ref|YP_978038.1| - 0.059 13.9 0.0 0.091 13.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|121637815|ref|YP_978038.1| - 0.1 12.5 0.3 0.37 10.7 0.3 1.9 1 1 0 1 1 1 0 MarR family Nudix_N_2 PF14803.6 gi|121637815|ref|YP_978038.1| - 0.12 12.3 0.4 0.12 12.3 0.4 2.2 2 0 0 2 2 2 0 Nudix N-terminal PBP PF01161.20 gi|121637816|ref|YP_978039.1| - 1.7e-21 76.9 0.0 2.5e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein PBP PF01161.20 gi|121637817|ref|YP_978040.1| - 3e-28 98.8 0.0 4e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein ADH_zinc_N PF00107.26 gi|121637818|ref|YP_978041.1| - 1.1e-26 93.3 0.0 2.2e-26 92.4 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121637818|ref|YP_978041.1| - 3.8e-18 66.8 0.0 1.1e-17 65.4 0.0 1.8 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121637818|ref|YP_978041.1| - 1.6e-08 34.4 0.0 3.7e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Lactamase_B PF00753.27 gi|121637819|ref|YP_978042.1| - 1.5e-20 74.0 9.4 2.6e-20 73.3 9.4 1.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121637819|ref|YP_978042.1| - 4.6e-06 26.3 2.1 2.5e-05 23.9 2.1 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain ICL PF00463.21 gi|121637821|ref|YP_978044.1| - 1.1e-119 400.3 0.0 2.4e-70 237.5 0.0 2.0 2 0 0 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 gi|121637821|ref|YP_978044.1| - 3.1e-11 43.2 0.0 1.2e-10 41.3 0.0 2.0 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Pentapeptide_2 PF01469.18 gi|121637822|ref|YP_978045.1| - 1e-83 274.9 440.0 5.8e-11 42.1 26.1 17.4 12 4 6 18 18 18 16 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121637822|ref|YP_978045.1| - 2.1e-57 193.7 25.3 3.2e-57 193.0 25.3 1.3 1 0 0 1 1 1 1 PPE family PPE PF00823.19 gi|121637823|ref|YP_978046.1| - 3.4e-58 196.2 26.3 7.5e-58 195.1 26.3 1.6 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121637823|ref|YP_978046.1| - 2.2e-55 184.2 334.7 1.3e-12 47.4 18.9 7.8 1 1 7 10 10 10 10 Pentapeptide repeats (8 copies) Polyketide_cyc2 PF10604.9 gi|121637824|ref|YP_978047.1| - 1.2e-21 77.5 2.9 1.3e-21 77.4 2.9 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121637824|ref|YP_978047.1| - 0.021 15.0 0.1 0.034 14.3 0.1 1.7 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Acyltransferase PF01553.21 gi|121637825|ref|YP_978048.1| - 1.5e-17 63.5 0.0 2.1e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase DAGAT PF03982.13 gi|121637825|ref|YP_978048.1| - 4e-10 39.1 0.0 4.9e-10 38.8 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol acyltransferase HAD PF12710.7 gi|121637826|ref|YP_978049.1| - 3.2e-11 44.0 0.7 2e-07 31.6 0.2 2.8 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121637826|ref|YP_978049.1| - 6.2e-05 23.4 0.4 0.00017 21.9 0.1 1.8 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Beta-lactamase PF00144.24 gi|121637827|ref|YP_978050.1| - 9.8e-62 209.1 1.1 1.2e-61 208.7 1.1 1.1 1 0 0 1 1 1 1 Beta-lactamase Beta-lactamase2 PF13354.6 gi|121637827|ref|YP_978050.1| - 0.086 12.4 0.1 0.19 11.3 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase enzyme family Beta-lactamase PF00144.24 gi|121637828|ref|YP_978051.1| - 5e-62 210.0 4.8 6.9e-62 209.6 4.8 1.1 1 0 0 1 1 1 1 Beta-lactamase AMP-binding PF00501.28 gi|121637830|ref|YP_978053.1| - 2.8e-61 207.4 0.0 3.6e-61 207.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF1942 PF09167.11 gi|121637831|ref|YP_978054.1| - 3.3e-51 172.5 1.3 4.4e-51 172.1 1.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1942) DUF4352 PF11611.8 gi|121637831|ref|YP_978054.1| - 0.021 15.1 0.0 0.034 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4352) DUF2071 PF09844.9 gi|121637832|ref|YP_978055.1| - 1.2e-60 204.8 0.1 1.4e-60 204.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) adh_short_C2 PF13561.6 gi|121637833|ref|YP_978056.1| - 9.7e-69 231.5 0.4 1.1e-68 231.3 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637833|ref|YP_978056.1| - 2.8e-56 190.1 3.3 3.2e-56 189.9 3.3 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637833|ref|YP_978056.1| - 1.1e-11 45.0 2.9 1.4e-11 44.6 2.9 1.1 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|121637833|ref|YP_978056.1| - 0.011 15.0 1.1 0.12 11.6 0.0 2.4 1 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 3Beta_HSD PF01073.19 gi|121637833|ref|YP_978056.1| - 0.015 14.3 1.1 0.022 13.8 1.1 1.4 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Shikimate_DH PF01488.20 gi|121637833|ref|YP_978056.1| - 0.072 13.2 1.0 0.2 11.7 0.1 2.1 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NmrA PF05368.13 gi|121637833|ref|YP_978056.1| - 0.095 12.2 2.2 0.071 12.7 0.5 1.6 2 0 0 2 2 2 0 NmrA-like family Eno-Rase_NADH_b PF12242.8 gi|121637833|ref|YP_978056.1| - 0.14 11.9 1.6 0.43 10.4 0.1 2.2 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MDMPI_C PF07398.11 gi|121637834|ref|YP_978057.1| - 4.1e-06 27.6 3.6 1.2e-05 26.1 3.6 1.9 1 1 0 1 1 1 1 MDMPI C-terminal domain MDMPI_N PF11716.8 gi|121637834|ref|YP_978057.1| - 0.0004 21.1 5.5 0.029 15.0 0.7 2.5 1 1 1 2 2 2 2 Mycothiol maleylpyruvate isomerase N-terminal domain DJ-1_PfpI PF01965.24 gi|121637835|ref|YP_978058.1| - 1e-06 28.6 0.0 2.9e-05 23.9 0.0 2.2 1 1 1 2 2 2 2 DJ-1/PfpI family HTH_18 PF12833.7 gi|121637836|ref|YP_978059.1| - 8.2e-23 80.5 0.7 2.7e-22 78.8 1.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121637836|ref|YP_978059.1| - 2.7e-12 46.4 0.0 3.9e-05 23.6 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DJ-1_PfpI PF01965.24 gi|121637836|ref|YP_978059.1| - 1.5e-07 31.4 0.1 2.6e-07 30.6 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Redoxin PF08534.10 gi|121637837|ref|YP_978060.1| - 5.8e-26 91.0 0.0 6.8e-26 90.7 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|121637837|ref|YP_978060.1| - 5.6e-15 55.4 0.0 6.9e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Acyl-CoA_dh_1 PF00441.24 gi|121637838|ref|YP_978061.1| - 1.5e-34 119.3 5.1 2.3e-34 118.8 5.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121637838|ref|YP_978061.1| - 2e-17 63.9 0.1 3.9e-17 62.9 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121637838|ref|YP_978061.1| - 3.1e-09 37.2 4.5 6.4e-09 36.2 4.5 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121637838|ref|YP_978061.1| - 0.00091 19.4 0.0 0.002 18.3 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121637839|ref|YP_978062.1| - 2.9e-28 98.8 0.1 6.1e-28 97.7 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121637839|ref|YP_978062.1| - 2.1e-22 79.1 0.0 3.3e-22 78.5 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|121637839|ref|YP_978062.1| - 1.2e-20 74.3 0.2 2.5e-20 73.2 0.1 1.7 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain ECH_1 PF00378.20 gi|121637840|ref|YP_978063.1| - 4.2e-37 127.8 0.0 5.5e-23 81.6 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121637840|ref|YP_978063.1| - 2.7e-15 56.7 0.0 4e-15 56.2 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Bac_luciferase PF00296.20 gi|121637841|ref|YP_978064.1| - 6.2e-43 147.4 1.8 7.8e-43 147.1 1.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase FAD_binding_6 PF00970.24 gi|121637842|ref|YP_978065.1| - 2.4e-21 75.9 0.0 9.9e-21 74.0 0.0 2.0 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|121637842|ref|YP_978065.1| - 1.5e-17 64.2 0.0 4e-17 62.8 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain Fer2 PF00111.27 gi|121637842|ref|YP_978065.1| - 1.5e-13 50.5 4.4 3.1e-13 49.5 4.4 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Trp_halogenase PF04820.14 gi|121637842|ref|YP_978065.1| - 0.001 18.0 0.1 0.57 9.0 0.0 3.2 3 0 0 3 3 3 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|121637842|ref|YP_978065.1| - 0.0018 17.5 0.1 0.26 10.3 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 gi|121637842|ref|YP_978065.1| - 0.028 13.7 1.1 0.87 8.8 1.1 2.4 1 1 0 1 1 1 0 FAD binding domain Pyr_redox_2 PF07992.14 gi|121637842|ref|YP_978065.1| - 0.043 13.0 0.7 0.33 10.1 0.1 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121637842|ref|YP_978065.1| - 0.054 13.1 2.5 0.33 10.5 0.3 2.8 2 1 0 3 3 3 0 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|121637842|ref|YP_978065.1| - 0.099 12.0 0.0 0.21 10.9 0.0 1.5 1 1 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|121637842|ref|YP_978065.1| - 0.2 10.9 0.8 0.94 8.7 0.2 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Abhydrolase_1 PF00561.20 gi|121637843|ref|YP_978066.1| - 1.3e-25 90.5 1.6 6.7e-24 84.9 0.6 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121637843|ref|YP_978066.1| - 4.8e-16 60.0 18.0 3.6e-11 44.1 9.3 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121637843|ref|YP_978066.1| - 1.2e-14 54.2 0.4 1.8e-14 53.6 0.4 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|121637843|ref|YP_978066.1| - 0.0036 16.0 0.0 0.016 13.9 0.0 1.8 2 0 0 2 2 2 1 Ndr family Flavin_Reduct PF01613.18 gi|121637844|ref|YP_978067.1| - 7.2e-29 100.8 0.0 8.5e-29 100.6 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain DUF1815 PF08844.10 gi|121637844|ref|YP_978067.1| - 0.19 11.7 0.0 0.49 10.4 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1815) DHBP_synthase PF00926.19 gi|121637845|ref|YP_978068.1| - 9.3e-58 194.9 0.2 1.3e-57 194.4 0.2 1.2 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase GTP_cyclohydro2 PF00925.20 gi|121637845|ref|YP_978068.1| - 3.8e-22 78.6 0.0 9.4e-21 74.1 0.0 2.2 1 1 1 2 2 2 1 GTP cyclohydrolase II adh_short_C2 PF13561.6 gi|121637846|ref|YP_978069.1| - 4.6e-59 199.8 10.0 5.9e-59 199.5 10.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637846|ref|YP_978069.1| - 1.5e-50 171.3 4.2 2e-50 171.0 4.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637846|ref|YP_978069.1| - 4.7e-12 46.2 3.4 8e-12 45.4 3.4 1.4 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 gi|121637846|ref|YP_978069.1| - 0.011 15.1 0.1 0.019 14.3 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|121637846|ref|YP_978069.1| - 0.022 14.2 0.4 0.038 13.4 0.3 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family YjeF_N PF03853.15 gi|121637846|ref|YP_978069.1| - 0.056 13.3 4.6 0.084 12.8 3.5 1.7 2 0 0 2 2 2 0 YjeF-related protein N-terminus DUF853 PF05872.12 gi|121637846|ref|YP_978069.1| - 0.077 11.6 1.0 0.1 11.1 1.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) UPF0146 PF03686.13 gi|121637846|ref|YP_978069.1| - 0.18 11.7 0.3 0.36 10.7 0.3 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) 3HCDH_N PF02737.18 gi|121637846|ref|YP_978069.1| - 0.23 11.3 1.7 0.43 10.5 1.7 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PemK_toxin PF02452.17 gi|121637847|ref|YP_978070.1| - 2.3e-14 53.7 0.1 2.6e-14 53.6 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system VapB_antitoxin PF09957.9 gi|121637848|ref|YP_978071.1| - 0.012 15.5 0.8 0.019 14.9 0.8 1.2 1 0 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB CcdA PF07362.12 gi|121637848|ref|YP_978071.1| - 0.15 12.5 0.3 0.23 11.9 0.3 1.3 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA SEC-C PF02810.15 gi|121637849|ref|YP_978072.1| - 6.1e-10 38.8 9.5 1.2e-09 37.9 9.5 1.5 1 0 0 1 1 1 1 SEC-C motif DUF222 PF02720.17 gi|121637850|ref|YP_978073.1| - 1.6e-99 333.2 14.2 2.1e-99 332.8 14.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637850|ref|YP_978073.1| - 9.6e-05 22.5 0.3 0.00022 21.3 0.3 1.6 1 0 0 1 1 1 1 HNH endonuclease Arc PF03869.14 gi|121637857|ref|YP_978080.1| - 0.041 13.7 0.0 0.055 13.3 0.0 1.2 1 0 0 1 1 1 0 Arc-like DNA binding domain PIN PF01850.21 gi|121637858|ref|YP_978081.1| - 0.0071 16.8 0.1 0.0082 16.6 0.1 1.1 1 0 0 1 1 1 1 PIN domain DUF1045 PF06299.12 gi|121637858|ref|YP_978081.1| - 0.016 15.2 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1045) Gp49 PF05973.14 gi|121637860|ref|YP_978083.1| - 1.5e-15 57.1 0.1 1.9e-15 56.8 0.1 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) HTH_3 PF01381.22 gi|121637861|ref|YP_978084.1| - 2.2e-10 40.4 0.0 3.2e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121637861|ref|YP_978084.1| - 3.8e-08 33.6 0.6 3.8e-08 33.6 0.6 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|121637861|ref|YP_978084.1| - 6.1e-08 32.5 0.0 1e-07 31.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121637861|ref|YP_978084.1| - 3.3e-05 23.8 0.0 5.2e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|121637861|ref|YP_978084.1| - 0.0016 18.8 0.0 0.0028 18.1 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|121637861|ref|YP_978084.1| - 0.022 14.3 0.2 0.084 12.4 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_24 PF13412.6 gi|121637861|ref|YP_978084.1| - 0.063 12.9 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding SecB PF02556.14 gi|121637862|ref|YP_978085.1| - 0.0021 17.9 0.0 0.003 17.5 0.0 1.3 1 1 0 1 1 1 1 Preprotein translocase subunit SecB ParE_toxin PF05016.15 gi|121637864|ref|YP_978087.1| - 2.6e-23 82.5 0.1 2.8e-23 82.3 0.1 1.0 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ParD_antitoxin PF03693.14 gi|121637865|ref|YP_978088.1| - 7.8e-43 144.8 0.5 8.6e-43 144.7 0.5 1.0 1 0 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RHH_1 PF01402.21 gi|121637865|ref|YP_978088.1| - 0.01 15.7 1.4 0.039 13.9 0.2 2.2 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family CdvA PF18822.1 gi|121637865|ref|YP_978088.1| - 0.012 15.4 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 CdvA-like coiled-coil domain PIN PF01850.21 gi|121637867|ref|YP_978090.1| - 1.2e-15 58.1 2.3 1.4e-15 57.9 2.3 1.1 1 0 0 1 1 1 1 PIN domain PhdYeFM_antitox PF02604.19 gi|121637868|ref|YP_978091.1| - 2.3e-06 27.3 0.1 3.3e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system TetR_N PF00440.23 gi|121637869|ref|YP_978092.1| - 8.3e-32 108.7 3.4 8.1e-17 60.7 0.6 2.6 2 0 0 2 2 2 2 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|121637869|ref|YP_978092.1| - 6e-08 32.9 2.7 9.7e-05 22.6 0.1 3.0 3 0 0 3 3 3 2 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|121637869|ref|YP_978092.1| - 0.0098 16.0 0.0 0.022 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase DUF4031 PF13223.6 gi|121637869|ref|YP_978092.1| - 0.031 14.5 0.8 0.33 11.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4031) HTH_AraC PF00165.23 gi|121637869|ref|YP_978092.1| - 0.058 13.5 0.0 0.59 10.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family MlaE PF02405.16 gi|121637870|ref|YP_978093.1| - 0.057 13.1 0.2 0.077 12.7 0.2 1.2 1 0 0 1 1 1 0 Permease MlaE RrnaAD PF00398.20 gi|121637871|ref|YP_978094.1| - 1.3e-10 40.8 0.0 6.1e-10 38.6 0.0 1.8 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase UPF0020 PF01170.18 gi|121637871|ref|YP_978094.1| - 0.18 11.5 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 RES PF08808.11 gi|121637872|ref|YP_978095.1| - 5.7e-15 55.5 0.8 7.2e-15 55.2 0.8 1.1 1 0 0 1 1 1 1 RES domain DUF2384 PF09722.10 gi|121637873|ref|YP_978096.1| - 3.8e-07 30.1 1.1 4.9e-07 29.7 0.3 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2384) HTH_31 PF13560.6 gi|121637873|ref|YP_978096.1| - 0.025 14.9 0.2 0.045 14.1 0.2 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|121637873|ref|YP_978096.1| - 0.064 13.3 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix DUF4447 PF14590.6 gi|121637873|ref|YP_978096.1| - 0.095 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) S-AdoMet_synt_C PF02773.16 gi|121637873|ref|YP_978096.1| - 0.097 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain HTH_23 PF13384.6 gi|121637873|ref|YP_978096.1| - 0.12 12.2 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain adh_short PF00106.25 gi|121637874|ref|YP_978097.1| - 0.045 13.2 0.4 0.3 10.5 0.1 2.0 2 0 0 2 2 2 0 short chain dehydrogenase PemK_toxin PF02452.17 gi|121637875|ref|YP_978098.1| - 8.6e-23 80.9 0.0 9.5e-23 80.7 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system E1-E2_ATPase PF00122.20 gi|121637876|ref|YP_978099.1| - 1.4e-40 138.7 6.4 1.4e-40 138.7 6.4 2.6 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121637876|ref|YP_978099.1| - 2e-40 139.3 11.1 4.5e-40 138.2 11.1 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121637876|ref|YP_978099.1| - 0.0015 18.9 2.7 0.02 15.3 0.8 3.3 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121637876|ref|YP_978099.1| - 0.035 13.8 0.7 0.093 12.5 0.3 1.7 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DUF1490 PF07371.12 gi|121637877|ref|YP_978100.1| - 3e-39 133.0 8.3 3.3e-39 132.8 8.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1490) HTH_5 PF01022.20 gi|121637878|ref|YP_978101.1| - 8.1e-17 60.8 0.1 1.5e-16 59.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121637878|ref|YP_978101.1| - 2.1e-11 43.7 0.7 3.5e-11 43.0 0.2 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121637878|ref|YP_978101.1| - 6e-06 26.1 0.1 1.1e-05 25.2 0.1 1.6 1 1 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|121637878|ref|YP_978101.1| - 0.00035 20.3 1.3 0.00048 19.9 0.1 1.9 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|121637878|ref|YP_978101.1| - 0.00055 19.9 0.0 0.0018 18.2 0.0 1.8 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain RP-C PF03428.13 gi|121637878|ref|YP_978101.1| - 0.029 14.0 0.7 0.18 11.5 0.1 2.1 2 1 1 3 3 3 0 Replication protein C N-terminal domain TrmB PF01978.19 gi|121637878|ref|YP_978101.1| - 0.056 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|121637878|ref|YP_978101.1| - 0.084 12.4 0.1 0.18 11.4 0.1 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding PaaX PF07848.12 gi|121637878|ref|YP_978101.1| - 0.1 12.9 0.1 0.69 10.2 0.0 2.1 2 0 0 2 2 2 0 PaaX-like protein Hemerythrin PF01814.23 gi|121637879|ref|YP_978102.1| - 1.7e-19 70.7 14.3 1.7e-13 51.3 2.9 2.2 1 1 1 2 2 2 2 Hemerythrin HHE cation binding domain Usp PF00582.26 gi|121637880|ref|YP_978103.1| - 1.8e-47 161.4 5.5 4.7e-24 85.5 2.5 2.2 2 0 0 2 2 2 2 Universal stress protein family E1-E2_ATPase PF00122.20 gi|121637881|ref|YP_978104.1| - 4.1e-54 182.8 1.8 4.1e-54 182.8 1.8 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|121637881|ref|YP_978104.1| - 5.7e-39 133.7 9.6 5.7e-39 133.7 9.6 1.6 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|121637881|ref|YP_978104.1| - 7.3e-19 68.9 10.5 2.2e-18 67.3 8.0 3.0 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|121637881|ref|YP_978104.1| - 2e-18 66.2 0.0 4.4e-18 65.1 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|121637881|ref|YP_978104.1| - 4.7e-18 64.6 0.0 9.4e-18 63.7 0.0 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|121637881|ref|YP_978104.1| - 7.7e-05 22.6 1.1 9.4e-05 22.3 0.2 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PEP_mutase PF13714.6 gi|121637882|ref|YP_978105.1| - 1.5e-60 204.6 0.1 1.8e-60 204.4 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase HpcH_HpaI PF03328.14 gi|121637882|ref|YP_978105.1| - 0.063 12.4 0.0 0.1 11.7 0.0 1.4 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family AA_permease_2 PF13520.6 gi|121637883|ref|YP_978106.1| - 7.5e-46 156.8 34.6 9.5e-46 156.5 34.6 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|121637883|ref|YP_978106.1| - 9.3e-35 120.1 35.3 1.2e-34 119.8 34.5 1.5 1 1 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|121637883|ref|YP_978106.1| - 0.00093 18.1 1.1 0.0014 17.5 1.1 1.3 1 0 0 1 1 1 1 Spore germination protein Aa_trans PF01490.18 gi|121637883|ref|YP_978106.1| - 0.011 14.5 25.9 0.004 15.9 16.2 3.2 2 2 0 2 2 2 0 Transmembrane amino acid transporter protein NAD_binding_8 PF13450.6 gi|121637884|ref|YP_978107.1| - 1.4e-06 28.4 0.0 1.9e-05 24.8 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|121637884|ref|YP_978107.1| - 0.0001 21.7 0.0 0.4 9.9 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121637884|ref|YP_978107.1| - 0.0039 16.5 0.0 0.016 14.4 0.0 1.8 2 0 0 2 2 2 1 Thi4 family Shikimate_DH PF01488.20 gi|121637884|ref|YP_978107.1| - 0.0074 16.3 0.0 0.71 9.9 0.0 2.3 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 gi|121637884|ref|YP_978107.1| - 0.033 14.2 0.1 2.1 8.3 0.0 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|121637884|ref|YP_978107.1| - 0.088 13.4 0.0 6.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|121637884|ref|YP_978107.1| - 0.13 12.5 0.0 5 7.4 0.1 2.4 2 0 0 2 2 2 0 TrkA-N domain FAD_binding_3 PF01494.19 gi|121637884|ref|YP_978107.1| - 0.16 11.2 0.3 0.33 10.2 0.1 1.5 2 0 0 2 2 2 0 FAD binding domain ApbA PF02558.16 gi|121637884|ref|YP_978107.1| - 0.2 11.3 0.3 0.39 10.4 0.1 1.5 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 gi|121637884|ref|YP_978107.1| - 0.21 10.3 0.1 0.36 9.5 0.1 1.3 1 0 0 1 1 1 0 HI0933-like protein K_oxygenase PF13434.6 gi|121637884|ref|YP_978107.1| - 0.23 10.6 0.0 0.53 9.4 0.0 1.5 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_3 PF13738.6 gi|121637884|ref|YP_978107.1| - 0.24 10.6 0.0 15 4.7 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Acyl-ACP_TE PF01643.17 gi|121637885|ref|YP_978108.1| - 1.9e-36 125.6 0.0 2.3e-36 125.4 0.0 1.0 1 0 0 1 1 1 1 Acyl-ACP thioesterase adh_short_C2 PF13561.6 gi|121637886|ref|YP_978109.1| - 1.3e-62 211.4 2.2 1.6e-62 211.1 2.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121637886|ref|YP_978109.1| - 6.2e-56 189.0 0.7 7.7e-56 188.6 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121637886|ref|YP_978109.1| - 8.7e-09 35.5 0.8 1.3e-08 35.0 0.8 1.2 1 0 0 1 1 1 1 KR domain G3P_antiterm PF04309.12 gi|121637886|ref|YP_978109.1| - 0.06 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Methyltransf_11 PF08241.12 gi|121637887|ref|YP_978110.1| - 4.1e-10 40.2 0.1 7.2e-10 39.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637887|ref|YP_978110.1| - 1.9e-08 34.3 0.0 3.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637887|ref|YP_978110.1| - 1.6e-07 31.9 0.1 3.3e-07 30.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637887|ref|YP_978110.1| - 8.5e-05 23.2 0.0 0.00018 22.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain DUF2059 PF09832.9 gi|121637887|ref|YP_978110.1| - 0.01 15.8 0.3 0.03 14.4 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2059) Ubie_methyltran PF01209.18 gi|121637887|ref|YP_978110.1| - 0.11 11.8 0.0 0.26 10.6 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family AAA_33 PF13671.6 gi|121637888|ref|YP_978111.1| - 1.6e-15 57.5 0.6 4.9e-15 55.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|121637888|ref|YP_978111.1| - 4.7e-05 22.8 0.9 8.7e-05 21.9 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_18 PF13238.6 gi|121637888|ref|YP_978111.1| - 0.00017 22.2 0.0 0.00048 20.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121637888|ref|YP_978111.1| - 0.0012 19.3 0.1 0.0033 17.8 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|121637888|ref|YP_978111.1| - 0.0017 18.8 0.2 0.017 15.5 0.0 2.6 3 0 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|121637888|ref|YP_978111.1| - 0.002 18.5 0.7 0.0046 17.3 0.2 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|121637888|ref|YP_978111.1| - 0.013 15.2 0.5 0.032 13.9 0.1 2.0 2 0 0 2 2 2 0 AAA domain ADK PF00406.22 gi|121637888|ref|YP_978111.1| - 0.015 15.4 0.0 0.039 14.0 0.0 1.6 1 0 0 1 1 1 0 Adenylate kinase Cytidylate_kin PF02224.18 gi|121637888|ref|YP_978111.1| - 0.056 13.2 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Cytidylate kinase AAA_5 PF07728.14 gi|121637888|ref|YP_978111.1| - 0.072 13.1 0.0 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|121637888|ref|YP_978111.1| - 0.097 12.9 0.9 0.66 10.3 0.1 2.3 1 1 1 2 2 2 0 AAA domain ATP_bind_2 PF03668.15 gi|121637888|ref|YP_978111.1| - 0.15 11.3 0.6 0.37 10.0 0.0 1.9 2 0 0 2 2 2 0 P-loop ATPase protein family RuvB_N PF05496.12 gi|121637888|ref|YP_978111.1| - 0.27 11.0 0.8 0.41 10.4 0.1 1.7 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Usp PF00582.26 gi|121637889|ref|YP_978112.1| - 3.2e-52 176.8 10.6 4.4e-26 92.1 3.7 2.0 2 0 0 2 2 2 2 Universal stress protein family Glyco_hydro_65m PF03632.15 gi|121637890|ref|YP_978113.1| - 4.3e-156 519.6 0.0 5.7e-156 519.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 65 central catalytic domain Trehalose_PPase PF02358.16 gi|121637890|ref|YP_978113.1| - 4.2e-69 232.2 0.0 6.2e-69 231.7 0.0 1.3 1 0 0 1 1 1 1 Trehalose-phosphatase Glyco_hydro_65N PF03636.15 gi|121637890|ref|YP_978113.1| - 2.2e-68 230.3 0.3 4.1e-68 229.4 0.3 1.5 1 0 0 1 1 1 1 Glycosyl hydrolase family 65, N-terminal domain Glyco_hydro_65C PF03633.15 gi|121637890|ref|YP_978113.1| - 5.6e-11 42.2 1.3 1.5e-10 40.8 0.0 2.4 3 0 0 3 3 3 1 Glycosyl hydrolase family 65, C-terminal domain Hydrolase PF00702.26 gi|121637890|ref|YP_978113.1| - 6.4e-05 23.3 0.6 0.038 14.3 0.0 3.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Fer4 PF00037.27 gi|121637891|ref|YP_978114.1| - 4.1e-08 32.7 17.7 1.1e-06 28.2 5.0 2.7 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|121637891|ref|YP_978114.1| - 0.00012 22.1 8.2 0.0015 18.6 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121637891|ref|YP_978114.1| - 0.00048 20.7 11.5 0.00076 20.0 1.5 2.2 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|121637891|ref|YP_978114.1| - 0.0048 17.3 6.1 0.019 15.4 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|121637891|ref|YP_978114.1| - 0.0057 17.6 5.7 0.14 13.1 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|121637891|ref|YP_978114.1| - 0.007 16.5 11.9 0.016 15.4 11.9 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|121637891|ref|YP_978114.1| - 0.0078 16.3 9.9 0.0085 16.1 2.8 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|121637891|ref|YP_978114.1| - 0.022 14.8 2.4 0.022 14.8 2.4 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121637891|ref|YP_978114.1| - 0.026 14.6 4.7 0.026 14.6 4.7 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|121637891|ref|YP_978114.1| - 0.051 14.1 4.1 0.051 14.1 4.1 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain DUF4143 PF13635.6 gi|121637892|ref|YP_978115.1| - 2.9e-23 82.3 0.0 4e-23 81.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_14 PF13173.6 gi|121637892|ref|YP_978115.1| - 1.3e-15 57.6 0.0 2.4e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121637892|ref|YP_978115.1| - 0.00012 22.5 0.1 0.0024 18.3 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain HTH_11 PF08279.12 gi|121637892|ref|YP_978115.1| - 0.00036 20.4 0.0 0.00086 19.2 0.0 1.6 1 0 0 1 1 1 1 HTH domain AAA_22 PF13401.6 gi|121637892|ref|YP_978115.1| - 0.0027 18.0 0.1 1.2 9.4 0.0 2.5 1 1 1 2 2 2 2 AAA domain HTH_IclR PF09339.10 gi|121637892|ref|YP_978115.1| - 0.013 15.3 0.7 0.04 13.7 0.7 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain TsaE PF02367.17 gi|121637892|ref|YP_978115.1| - 0.16 12.0 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE VapB_antitoxin PF09957.9 gi|121637893|ref|YP_978116.1| - 3e-17 62.3 0.4 4e-17 61.9 0.4 1.2 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB PIN PF01850.21 gi|121637894|ref|YP_978117.1| - 9.7e-15 55.1 1.4 1.2e-14 54.9 1.4 1.0 1 0 0 1 1 1 1 PIN domain PIN_4 PF13638.6 gi|121637894|ref|YP_978117.1| - 0.0019 18.5 0.0 0.002 18.4 0.0 1.2 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|121637894|ref|YP_978117.1| - 0.0076 16.8 0.0 0.0085 16.6 0.0 1.2 1 0 0 1 1 1 1 PIN domain MarR_2 PF12802.7 gi|121637895|ref|YP_978118.1| - 1.4e-10 40.9 2.5 2.9e-10 39.9 0.7 2.3 1 1 1 2 2 2 1 MarR family HTH_29 PF13551.6 gi|121637895|ref|YP_978118.1| - 2.1e-05 24.5 0.1 6.9e-05 22.8 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|121637895|ref|YP_978118.1| - 0.0097 15.9 1.4 0.062 13.3 0.1 2.5 2 2 1 3 3 3 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|121637895|ref|YP_978118.1| - 0.015 15.2 0.0 0.03 14.2 0.0 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|121637895|ref|YP_978118.1| - 0.019 14.7 0.7 0.057 13.2 0.3 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_17 PF12728.7 gi|121637895|ref|YP_978118.1| - 0.039 14.1 0.0 0.11 12.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|121637895|ref|YP_978118.1| - 0.19 11.8 0.1 0.19 11.8 0.1 2.6 3 1 0 3 3 3 0 Helix-turn-helix domain DUF1398 PF07166.11 gi|121637896|ref|YP_978119.1| - 9.8e-10 38.5 0.0 1.5e-09 37.9 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1398) DEDD_Tnp_IS110 PF01548.17 gi|121637897|ref|YP_978120.1| - 8.7e-28 97.1 0.0 1e-27 96.9 0.0 1.1 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.16 gi|121637898|ref|YP_978121.1| - 3e-18 65.9 0.5 5.4e-18 65.1 0.0 1.7 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family DUF222 PF02720.17 gi|121637899|ref|YP_978122.1| - 1.3e-73 248.1 4.7 2.1e-73 247.4 4.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121637899|ref|YP_978122.1| - 1.6e-07 31.3 1.9 3.1e-07 30.5 1.9 1.5 1 0 0 1 1 1 1 HNH endonuclease HNH_2 PF13391.6 gi|121637899|ref|YP_978122.1| - 0.029 14.5 1.9 0.16 12.1 1.9 2.1 1 1 0 1 1 1 0 HNH endonuclease zf-ISL3 PF14690.6 gi|121637899|ref|YP_978122.1| - 0.8 10.4 4.0 1.4 9.7 0.0 2.9 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RVT_1 PF00078.27 gi|121637900|ref|YP_978123.1| - 0.23 10.9 0.0 0.31 10.5 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_M78 PF06114.13 gi|121637901|ref|YP_978124.1| - 4e-23 81.7 0.0 6.5e-23 81.0 0.0 1.3 1 0 0 1 1 1 1 IrrE N-terminal-like domain HTH_3 PF01381.22 gi|121637901|ref|YP_978124.1| - 2.7e-16 59.4 0.0 6.4e-16 58.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121637901|ref|YP_978124.1| - 6.8e-14 52.0 0.0 6.8e-14 52.0 0.0 2.7 4 0 0 4 4 4 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121637901|ref|YP_978124.1| - 1.9e-08 34.2 0.0 4.9e-08 32.9 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|121637901|ref|YP_978124.1| - 4e-05 23.5 0.0 0.044 13.7 0.0 3.2 2 1 1 3 3 3 2 Helix-turn-helix domain HTH_24 PF13412.6 gi|121637901|ref|YP_978124.1| - 0.0004 19.9 0.1 0.00097 18.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MqsA_antitoxin PF15731.5 gi|121637901|ref|YP_978124.1| - 0.00075 19.6 0.0 0.0016 18.5 0.0 1.5 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_26 PF13443.6 gi|121637901|ref|YP_978124.1| - 0.0023 18.3 0.1 0.0091 16.4 0.0 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Phage_lysozyme2 PF18013.1 gi|121637901|ref|YP_978124.1| - 0.05 13.6 0.0 4 7.5 0.0 2.9 2 1 1 3 3 3 0 Phage tail lysozyme DUF433 PF04255.14 gi|121637902|ref|YP_978125.1| - 9.4e-11 41.4 0.0 3.5e-10 39.6 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF433) HTH_Tnp_ISL3 PF13542.6 gi|121637902|ref|YP_978125.1| - 0.0067 15.8 0.0 0.013 14.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 gi|121637902|ref|YP_978125.1| - 0.03 14.1 0.0 4.8 7.1 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 gi|121637902|ref|YP_978125.1| - 0.12 12.6 0.2 0.95 9.6 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain PIN_10 PF18478.1 gi|121637903|ref|YP_978126.1| - 2.1e-17 63.1 0.1 3.2e-17 62.5 0.1 1.2 1 0 0 1 1 1 1 PIN like domain Type_ISP_C PF18135.1 gi|121637904|ref|YP_978127.1| - 8.8e-10 38.1 0.0 1.1e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Type ISP C-terminal specificity domain HTH_37 PF13744.6 gi|121637905|ref|YP_978128.1| - 3e-13 49.5 0.3 3.6e-13 49.3 0.3 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|121637905|ref|YP_978128.1| - 2.2e-10 40.4 0.2 2.9e-10 40.0 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121637905|ref|YP_978128.1| - 3.5e-10 40.1 0.9 5.5e-10 39.4 0.9 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121637905|ref|YP_978128.1| - 2e-07 30.9 0.0 2.9e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|121637905|ref|YP_978128.1| - 3.4e-06 26.8 0.2 5e-06 26.3 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|121637905|ref|YP_978128.1| - 0.025 14.1 0.9 0.051 13.1 0.3 1.9 1 1 1 2 2 2 0 Sigma-70, region 4 HTH_26 PF13443.6 gi|121637905|ref|YP_978128.1| - 0.028 14.9 0.0 0.042 14.3 0.0 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Gp49 PF05973.14 gi|121637906|ref|YP_978129.1| - 3.2e-22 78.5 0.0 4.5e-22 78.0 0.0 1.2 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) Type_ISP_C PF18135.1 gi|121637910|ref|YP_978133.1| - 1.4e-106 356.4 0.0 2e-106 355.9 0.0 1.2 1 0 0 1 1 1 1 Type ISP C-terminal specificity domain Mrr_cat_2 PF13156.6 gi|121637910|ref|YP_978133.1| - 3.3e-47 159.5 0.0 6.7e-47 158.5 0.0 1.5 1 0 0 1 1 1 1 Restriction endonuclease ResIII PF04851.15 gi|121637910|ref|YP_978133.1| - 1.8e-28 99.7 0.0 3.5e-28 98.7 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|121637910|ref|YP_978133.1| - 2.6e-08 33.8 0.1 2.9e-07 30.4 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase Mrr_cat PF04471.12 gi|121637910|ref|YP_978133.1| - 2.2e-06 27.7 0.0 7.6e-06 25.9 0.0 2.0 1 0 0 1 1 1 1 Restriction endonuclease Helicase_C PF00271.31 gi|121637910|ref|YP_978133.1| - 1.2e-05 25.6 0.0 5e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain N6_Mtase PF02384.16 gi|121637910|ref|YP_978133.1| - 0.00077 18.8 0.0 0.0016 17.8 0.0 1.5 1 1 0 1 1 1 1 N-6 DNA Methylase SWI2_SNF2 PF18766.1 gi|121637910|ref|YP_978133.1| - 0.003 17.3 0.0 0.0081 15.9 0.0 1.7 1 1 0 1 1 1 1 SWI2/SNF2 ATPase Eco57I PF07669.11 gi|121637910|ref|YP_978133.1| - 0.048 14.2 0.0 0.9 10.1 0.0 2.8 3 0 0 3 3 3 0 Eco57I restriction-modification methylase Cation_efflux PF01545.21 gi|121637911|ref|YP_978134.1| - 7.6e-43 146.6 12.9 9.4e-43 146.3 12.9 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|121637911|ref|YP_978134.1| - 5.6e-16 58.4 1.0 4.9e-15 55.4 0.3 2.3 2 0 0 2 2 2 1 Dimerisation domain of Zinc Transporter Usp PF00582.26 gi|121637912|ref|YP_978135.1| - 7.7e-55 185.3 4.1 1.4e-27 96.9 0.6 2.0 2 0 0 2 2 2 2 Universal stress protein family GAF_2 PF13185.6 gi|121637913|ref|YP_978136.1| - 1.9e-25 89.8 9.4 1.1e-17 64.6 0.3 3.0 3 0 0 3 3 3 2 GAF domain GAF PF01590.26 gi|121637913|ref|YP_978136.1| - 4.6e-23 82.3 0.6 2.2e-14 54.2 0.0 2.6 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 gi|121637913|ref|YP_978136.1| - 1.1e-18 67.9 0.1 2.6e-08 34.3 0.1 2.7 2 1 0 2 2 2 2 GAF domain HisKA_3 PF07730.13 gi|121637913|ref|YP_978136.1| - 3.4e-10 40.3 0.3 3.4e-10 40.3 0.3 3.1 3 0 0 3 3 3 1 Histidine kinase HATPase_c PF02518.26 gi|121637913|ref|YP_978136.1| - 1e-06 29.2 0.4 7.2e-06 26.5 0.4 2.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121637913|ref|YP_978136.1| - 0.0024 17.8 1.3 0.0039 17.1 0.2 1.9 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|121637913|ref|YP_978136.1| - 0.0027 17.5 0.4 0.0049 16.7 0.4 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Usp PF00582.26 gi|121637914|ref|YP_978137.1| - 7.3e-20 71.9 13.5 8.2e-18 65.3 4.2 2.9 2 1 0 2 2 2 2 Universal stress protein family PfkB PF00294.24 gi|121637915|ref|YP_978138.1| - 1.7e-56 191.8 0.0 2e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|121637915|ref|YP_978138.1| - 0.0083 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Erythro_esteras PF05139.14 gi|121637916|ref|YP_978139.1| - 1.3e-109 367.1 8.1 2.1e-109 366.5 8.1 1.3 1 0 0 1 1 1 1 Erythromycin esterase Pribosyltran PF00156.27 gi|121637916|ref|YP_978139.1| - 2.4e-22 79.1 0.0 8e-22 77.5 0.0 1.9 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121637916|ref|YP_978139.1| - 4.9e-05 22.9 0.0 9e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|121637916|ref|YP_978139.1| - 0.075 12.5 0.0 0.25 10.8 0.0 1.8 2 0 0 2 2 2 0 Phosphoribosyl transferase ETF PF01012.21 gi|121637916|ref|YP_978139.1| - 0.08 12.8 9.0 0.46 10.4 0.1 3.6 3 1 1 4 4 4 0 Electron transfer flavoprotein domain PSCyt2 PF07583.11 gi|121637916|ref|YP_978139.1| - 0.086 12.8 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) HSP20 PF00011.21 gi|121637917|ref|YP_978140.1| - 5e-24 84.4 0.1 6.4e-24 84.0 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|121637917|ref|YP_978140.1| - 9e-12 44.4 0.0 1.3e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA Nitroreductase PF00881.24 gi|121637918|ref|YP_978141.1| - 5.1e-10 39.7 0.5 0.00023 21.3 0.0 2.9 2 1 1 3 3 3 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121637918|ref|YP_978141.1| - 9.6e-06 25.3 0.0 0.0019 17.8 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase DUF3097 PF11296.8 gi|121637919|ref|YP_978142.1| - 4.8e-120 399.9 0.8 5.5e-120 399.7 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3097) HTH_5 PF01022.20 gi|121637920|ref|YP_978143.1| - 2.6e-13 49.6 0.0 3.9e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121637920|ref|YP_978143.1| - 2.4e-10 40.3 0.3 3.7e-10 39.7 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121637920|ref|YP_978143.1| - 6.2e-08 32.4 0.8 1e-07 31.7 0.8 1.5 1 1 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|121637920|ref|YP_978143.1| - 0.00018 21.4 0.0 0.00028 20.8 0.0 1.3 1 0 0 1 1 1 1 HTH domain DprA_WH PF17782.1 gi|121637920|ref|YP_978143.1| - 0.001 19.1 0.5 0.0015 18.6 0.5 1.3 1 0 0 1 1 1 1 DprA winged helix domain HTH_Crp_2 PF13545.6 gi|121637920|ref|YP_978143.1| - 0.0021 18.0 0.0 0.0029 17.5 0.0 1.2 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|121637920|ref|YP_978143.1| - 0.0038 17.1 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|121637920|ref|YP_978143.1| - 0.0095 15.7 0.1 0.017 14.9 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|121637920|ref|YP_978143.1| - 0.02 15.0 0.1 0.037 14.1 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HxlR PF01638.17 gi|121637920|ref|YP_978143.1| - 0.048 13.5 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix GntR PF00392.21 gi|121637920|ref|YP_978143.1| - 0.11 12.2 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|121637920|ref|YP_978143.1| - 0.11 12.5 0.0 0.26 11.2 0.0 1.6 1 1 1 2 2 2 0 MarR family HTH_24 PF13412.6 gi|121637920|ref|YP_978143.1| - 0.12 11.9 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|121637920|ref|YP_978143.1| - 0.18 12.0 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain AHSA1 PF08327.11 gi|121637921|ref|YP_978144.1| - 5.7e-08 33.0 0.1 8.2e-08 32.5 0.1 1.2 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein MDMPI_N PF11716.8 gi|121637922|ref|YP_978145.1| - 1.3e-11 45.3 5.0 1.1e-09 39.1 0.4 2.7 2 1 0 3 3 3 2 Mycothiol maleylpyruvate isomerase N-terminal domain MDMPI_C PF07398.11 gi|121637922|ref|YP_978145.1| - 8.2e-05 23.4 1.9 0.00016 22.5 1.9 1.5 1 0 0 1 1 1 1 MDMPI C-terminal domain DinB_2 PF12867.7 gi|121637922|ref|YP_978145.1| - 0.00028 21.4 0.0 0.00046 20.7 0.0 1.4 1 0 0 1 1 1 1 DinB superfamily HTH_32 PF13565.6 gi|121637922|ref|YP_978145.1| - 0.036 14.7 1.2 3.3 8.4 0.4 3.0 3 0 0 3 3 3 0 Homeodomain-like domain Patatin PF01734.22 gi|121637923|ref|YP_978146.1| - 5.8e-30 105.0 1.5 9.6e-30 104.3 1.5 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase ABC_tran PF00005.27 gi|121637924|ref|YP_978147.1| - 8.7e-28 97.5 0.0 1.6e-27 96.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|121637924|ref|YP_978147.1| - 8.5e-08 32.9 0.0 2.6e-07 31.3 0.0 1.9 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 gi|121637924|ref|YP_978147.1| - 2.3e-07 30.9 0.6 1.7e-06 28.1 0.1 2.4 2 0 0 2 2 2 1 TOBE domain CysA_C_terminal PF17850.1 gi|121637924|ref|YP_978147.1| - 4.4e-05 23.9 0.0 0.00026 21.5 0.0 2.3 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA_22 PF13401.6 gi|121637924|ref|YP_978147.1| - 0.0015 18.8 0.3 0.0028 17.9 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|121637924|ref|YP_978147.1| - 0.0015 18.4 0.0 1.3 8.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|121637924|ref|YP_978147.1| - 0.0017 18.8 0.4 0.0028 18.1 0.4 1.5 1 1 0 1 1 1 1 AAA ATPase domain TOBE PF03459.17 gi|121637924|ref|YP_978147.1| - 0.002 18.4 0.0 0.0077 16.5 0.0 2.0 2 0 0 2 2 2 1 TOBE domain AAA PF00004.29 gi|121637924|ref|YP_978147.1| - 0.0029 18.0 0.0 0.0087 16.5 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|121637924|ref|YP_978147.1| - 0.0049 16.5 0.0 0.064 12.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|121637924|ref|YP_978147.1| - 0.006 16.0 0.1 0.026 14.0 0.1 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|121637924|ref|YP_978147.1| - 0.012 15.4 0.1 0.023 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|121637924|ref|YP_978147.1| - 0.028 14.3 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|121637924|ref|YP_978147.1| - 0.034 14.0 0.0 0.079 12.9 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase AAA_28 PF13521.6 gi|121637924|ref|YP_978147.1| - 0.079 13.2 0.2 0.18 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|121637924|ref|YP_978147.1| - 0.096 12.8 0.6 0.16 12.1 0.6 1.6 1 1 0 1 1 1 0 AAA domain T4SS-DNA_transf PF02534.14 gi|121637924|ref|YP_978147.1| - 0.19 10.5 0.0 0.31 9.8 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer BPD_transp_1 PF00528.22 gi|121637925|ref|YP_978148.1| - 5.2e-19 68.7 15.4 5.2e-19 68.7 15.4 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121637926|ref|YP_978149.1| - 3e-16 59.7 23.7 3e-16 59.7 23.7 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Pam17 PF08566.10 gi|121637926|ref|YP_978149.1| - 0.24 11.2 3.2 2.4 8.0 0.2 2.4 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 SBP_bac_1 PF01547.25 gi|121637927|ref|YP_978150.1| - 2.9e-49 168.7 0.5 3.8e-49 168.3 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|121637927|ref|YP_978150.1| - 3.4e-29 102.5 0.0 4.3e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 gi|121637927|ref|YP_978150.1| - 0.0016 18.2 2.7 0.0064 16.3 2.7 2.1 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence NTF2 PF02136.20 gi|121637928|ref|YP_978151.1| - 4.7e-13 49.8 0.0 7.3e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 gi|121637928|ref|YP_978151.1| - 1.1e-07 32.4 0.9 1.1e-07 32.4 0.9 2.4 2 2 0 2 2 2 1 SnoaL-like domain SnoaL_4 PF13577.6 gi|121637928|ref|YP_978151.1| - 0.088 12.9 0.0 0.74 9.9 0.0 2.2 1 1 0 1 1 1 0 SnoaL-like domain Isochorismatase PF00857.20 gi|121637929|ref|YP_978152.1| - 2.1e-32 112.7 0.1 2.3e-32 112.6 0.1 1.0 1 0 0 1 1 1 1 Isochorismatase family Flavi_NS5 PF00972.20 gi|121637929|ref|YP_978152.1| - 0.17 10.0 0.0 0.22 9.6 0.0 1.1 1 0 0 1 1 1 0 Flavivirus RNA-directed RNA polymerase DUF2784 PF10861.8 gi|121637930|ref|YP_978153.1| - 2.6e-31 108.0 8.4 2.9e-31 107.8 8.4 1.0 1 0 0 1 1 1 1 Protein of Unknown function (DUF2784) 2TM PF13239.6 gi|121637930|ref|YP_978153.1| - 4 7.8 8.0 0.12 12.7 1.0 1.9 2 0 0 2 2 2 0 2TM domain COesterase PF00135.28 gi|121637931|ref|YP_978154.1| - 5.5e-95 319.2 0.0 3.2e-94 316.6 0.0 1.8 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 gi|121637931|ref|YP_978154.1| - 9.8e-13 48.4 3.6 2.6e-06 27.4 0.1 2.3 2 0 0 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121637931|ref|YP_978154.1| - 0.0014 18.2 0.1 0.0033 16.9 0.1 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121637931|ref|YP_978154.1| - 0.054 12.8 0.1 0.096 11.9 0.1 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Say1_Mug180 PF10340.9 gi|121637931|ref|YP_978154.1| - 0.091 11.6 0.0 0.21 10.4 0.0 1.5 1 1 0 1 1 1 0 Steryl acetyl hydrolase PEP-utilizers PF00391.23 gi|121637933|ref|YP_978156.1| - 7.5e-20 70.4 0.1 1.9e-19 69.1 0.1 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Epimerase PF01370.21 gi|121637933|ref|YP_978156.1| - 1.1e-14 54.4 0.3 3.9e-14 52.7 0.1 1.9 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121637933|ref|YP_978156.1| - 2.9e-14 53.4 0.8 1.2e-13 51.3 0.8 2.1 1 1 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 gi|121637933|ref|YP_978156.1| - 4.5e-10 39.0 0.0 8.9e-10 38.0 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|121637933|ref|YP_978156.1| - 1.5e-06 27.6 0.2 2.2e-05 23.7 0.1 2.2 2 0 0 2 2 2 1 RmlD substrate binding domain adh_short PF00106.25 gi|121637933|ref|YP_978156.1| - 1.7e-05 24.4 0.4 0.022 14.2 0.1 2.3 2 0 0 2 2 2 2 short chain dehydrogenase NmrA PF05368.13 gi|121637933|ref|YP_978156.1| - 0.00021 20.9 0.2 0.00039 20.1 0.2 1.4 1 0 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 gi|121637933|ref|YP_978156.1| - 0.025 13.7 0.0 1.3 8.2 0.0 2.7 2 1 1 3 3 3 0 Male sterility protein GDP_Man_Dehyd PF16363.5 gi|121637933|ref|YP_978156.1| - 0.033 13.6 0.1 0.12 11.7 0.1 1.9 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase CoA_binding_2 PF13380.6 gi|121637933|ref|YP_978156.1| - 0.068 13.7 0.7 1.8 9.1 0.1 3.2 2 1 0 2 2 2 0 CoA binding domain NAD_binding_2 PF03446.15 gi|121637933|ref|YP_978156.1| - 0.12 12.6 0.0 0.32 11.2 0.0 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Polysacc_synt_2 PF02719.15 gi|121637933|ref|YP_978156.1| - 0.98 8.5 3.2 19 4.3 3.2 2.5 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein ketoacyl-synt PF00109.26 gi|121637934|ref|YP_978157.1| - 5.3e-177 586.4 5.3 1.9e-91 306.1 0.7 5.0 6 0 0 6 6 6 2 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121637934|ref|YP_978157.1| - 8.1e-152 505.3 4.2 1e-89 301.2 0.1 2.6 2 0 0 2 2 2 2 Acyl transferase domain KR PF08659.10 gi|121637934|ref|YP_978157.1| - 6.4e-119 394.4 15.6 3.9e-59 199.6 3.2 3.5 3 0 0 3 3 3 2 KR domain PS-DH PF14765.6 gi|121637934|ref|YP_978157.1| - 2e-104 349.0 11.4 4.9e-53 180.3 1.5 2.5 2 0 0 2 2 2 2 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121637934|ref|YP_978157.1| - 2.1e-87 289.0 7.0 5.7e-43 145.7 0.8 3.0 2 0 0 2 2 2 2 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N_2 PF13602.6 gi|121637934|ref|YP_978157.1| - 4.7e-42 144.2 0.2 1.7e-19 71.2 0.0 3.9 2 0 0 2 2 2 2 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|121637934|ref|YP_978157.1| - 1.7e-30 105.7 12.0 4.7e-15 55.7 0.1 4.3 4 0 0 4 4 4 2 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121637934|ref|YP_978157.1| - 1.5e-28 99.5 0.0 1.1e-12 48.3 0.0 2.8 2 0 0 2 2 2 2 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121637934|ref|YP_978157.1| - 2.1e-28 98.5 0.0 2.6e-13 50.1 0.0 2.8 2 0 0 2 2 2 2 Phosphopantetheine attachment site adh_short PF00106.25 gi|121637934|ref|YP_978157.1| - 9.1e-17 61.1 18.8 3.2e-09 36.5 0.9 3.9 4 0 0 4 4 4 2 short chain dehydrogenase Epimerase PF01370.21 gi|121637934|ref|YP_978157.1| - 1.7e-13 50.6 3.9 6.5e-06 25.8 0.3 2.4 2 0 0 2 2 2 2 NAD dependent epimerase/dehydratase family Thiolase_N PF00108.23 gi|121637934|ref|YP_978157.1| - 3e-11 43.2 5.7 5.5e-05 22.6 0.3 2.8 2 0 0 2 2 2 2 Thiolase, N-terminal domain ADH_N PF08240.12 gi|121637934|ref|YP_978157.1| - 4.1e-10 39.5 0.4 8.4e-05 22.4 0.1 2.8 2 0 0 2 2 2 2 Alcohol dehydrogenase GroES-like domain GDP_Man_Dehyd PF16363.5 gi|121637934|ref|YP_978157.1| - 7.9e-08 32.1 0.0 0.013 14.9 0.0 2.3 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|121637934|ref|YP_978157.1| - 8.8e-08 31.6 0.5 0.011 14.9 0.1 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein Creatininase PF02633.14 gi|121637934|ref|YP_978157.1| - 4.5e-06 26.3 5.5 0.028 13.9 0.5 2.7 2 0 0 2 2 2 2 Creatinine amidohydrolase NmrA PF05368.13 gi|121637934|ref|YP_978157.1| - 7.2e-06 25.7 7.3 0.022 14.3 0.8 2.5 2 0 0 2 2 2 2 NmrA-like family SAT PF16073.5 gi|121637934|ref|YP_978157.1| - 0.00031 20.6 2.8 1.1 8.9 0.0 4.3 3 1 1 4 4 4 1 Starter unit:ACP transacylase in aflatoxin biosynthesis MLTR_LBD PF17765.1 gi|121637934|ref|YP_978157.1| - 0.0014 18.8 4.7 0.98 9.5 0.2 3.3 3 0 0 3 3 3 2 MmyB-like transcription regulator ligand binding domain PikAIV_N PF18605.1 gi|121637934|ref|YP_978157.1| - 0.0034 16.9 5.5 0.0086 15.6 5.5 1.7 1 0 0 1 1 1 1 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain YjeF_N PF03853.15 gi|121637934|ref|YP_978157.1| - 0.014 15.3 13.9 0.38 10.6 0.1 4.4 4 0 0 4 4 4 0 YjeF-related protein N-terminus ACP_syn_III PF08545.10 gi|121637934|ref|YP_978157.1| - 0.027 14.3 5.3 4.4 7.2 0.1 4.0 3 0 0 3 3 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MoCF_biosynth PF00994.24 gi|121637934|ref|YP_978157.1| - 0.036 13.7 0.4 20 4.8 0.0 3.6 2 0 0 2 2 2 0 Probable molybdopterin binding domain Amdase PF17645.1 gi|121637934|ref|YP_978157.1| - 0.079 12.6 2.9 4.8 6.7 0.1 3.2 3 0 0 3 3 3 0 Arylmalonate decarboxylase GBP_PSP PF02425.15 gi|121637934|ref|YP_978157.1| - 0.45 10.2 3.7 4.2 7.1 0.2 2.8 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide NYN PF01936.18 gi|121637935|ref|YP_978158.1| - 0.039 14.4 0.2 0.048 14.1 0.2 1.0 1 0 0 1 1 1 0 NYN domain DciA PF05258.12 gi|121637935|ref|YP_978158.1| - 0.1 13.0 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Dna[CI] antecedent, DciA RbpA PF13397.6 gi|121637936|ref|YP_978159.1| - 6.2e-40 136.0 0.1 7e-40 135.9 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase-binding protein Glycos_transf_2 PF00535.26 gi|121637937|ref|YP_978160.1| - 8.9e-29 100.5 0.0 1.5e-28 99.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 CN_hydrolase PF00795.22 gi|121637937|ref|YP_978160.1| - 1.3e-14 54.2 0.0 2.1e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Glyco_tranf_2_3 PF13641.6 gi|121637937|ref|YP_978160.1| - 7.9e-07 29.2 0.0 1.3e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Amidohydro_3 PF07969.11 gi|121637938|ref|YP_978161.1| - 1.4e-106 357.9 18.4 1.6e-106 357.7 18.4 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|121637938|ref|YP_978161.1| - 1e-07 31.7 0.1 0.0011 18.3 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family FxsA PF04186.13 gi|121637939|ref|YP_978162.1| - 1.7e-17 63.5 14.2 2.5e-17 62.9 14.2 1.2 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DUF3927 PF13064.6 gi|121637939|ref|YP_978162.1| - 1.1 9.3 7.1 0.24 11.4 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) DLH PF01738.18 gi|121637940|ref|YP_978163.1| - 2.9e-60 203.5 0.0 3.3e-60 203.3 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|121637940|ref|YP_978163.1| - 3e-06 27.3 0.6 0.015 15.2 0.2 2.8 2 1 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|121637940|ref|YP_978163.1| - 0.0034 16.9 0.0 0.14 11.6 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 gi|121637940|ref|YP_978163.1| - 0.018 15.7 1.8 0.049 14.2 1.8 1.7 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|121637940|ref|YP_978163.1| - 0.076 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Chlorophyllase PF07224.11 gi|121637940|ref|YP_978163.1| - 0.24 10.4 0.0 0.32 10.0 0.0 1.4 1 1 0 1 1 1 0 Chlorophyllase Ribosomal_S18 PF01084.20 gi|121637941|ref|YP_978164.1| - 5.2e-22 77.8 0.1 7.4e-22 77.3 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S18 Ribosomal_S5 PF00333.20 gi|121637941|ref|YP_978164.1| - 0.007 16.3 0.4 0.12 12.3 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain GSK-3_bind PF05350.12 gi|121637941|ref|YP_978164.1| - 0.011 15.1 0.1 0.011 15.0 0.1 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Ribosomal_S14 PF00253.21 gi|121637942|ref|YP_978165.1| - 1.7e-23 82.1 0.3 3.8e-23 81.0 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e HTH_17 PF12728.7 gi|121637942|ref|YP_978165.1| - 0.062 13.5 0.4 0.15 12.3 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_L33 PF00471.20 gi|121637943|ref|YP_978166.1| - 1.1e-15 57.8 0.0 1.2e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L33 Ribosomal_L28 PF00830.19 gi|121637944|ref|YP_978167.1| - 7.1e-24 83.8 0.7 8.3e-24 83.6 0.7 1.1 1 0 0 1 1 1 1 Ribosomal L28 family Tat PF00539.18 gi|121637944|ref|YP_978167.1| - 0.11 12.6 0.2 0.11 12.6 0.2 1.6 2 0 0 2 2 2 0 Transactivating regulatory protein (Tat) AAA_lid_10 PF17872.1 gi|121637944|ref|YP_978167.1| - 0.19 11.9 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain ZnuA PF01297.17 gi|121637945|ref|YP_978168.1| - 8.3e-40 136.8 0.1 1.1e-39 136.4 0.1 1.1 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic PucR PF07905.11 gi|121637945|ref|YP_978168.1| - 0.02 15.2 0.1 0.039 14.2 0.1 1.4 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family Putative_PNPOx PF01243.20 gi|121637946|ref|YP_978170.1| - 1.4e-11 44.4 0.0 1.9e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|121637946|ref|YP_978170.1| - 0.02 14.5 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like CobN-Mg_chel PF02514.16 gi|121637947|ref|YP_978171.1| - 0 1326.4 0.0 0 1326.2 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase RHH_1 PF01402.21 gi|121637948|ref|YP_978172.1| - 0.015 15.2 0.9 0.035 14.0 0.9 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family RHH_4 PF13467.6 gi|121637948|ref|YP_978172.1| - 0.029 14.2 2.0 0.04 13.8 2.0 1.3 1 1 0 1 1 1 0 Ribbon-helix-helix domain CcdA PF07362.12 gi|121637948|ref|YP_978172.1| - 0.038 14.4 1.6 0.05 14.0 1.6 1.3 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA HicB PF05534.12 gi|121637948|ref|YP_978172.1| - 0.12 12.3 0.9 0.32 10.9 0.1 2.0 1 1 1 2 2 2 0 HicB family NIR_SIR_ferr PF03460.17 gi|121637949|ref|YP_978173.1| - 6.6e-17 61.1 0.1 2.6e-12 46.4 0.1 2.6 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain CbiC PF02570.15 gi|121637950|ref|YP_978174.1| - 1.7e-67 226.9 1.5 1.9e-67 226.7 1.5 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase TP_methylase PF00590.20 gi|121637951|ref|YP_978175.1| - 3.2e-74 249.4 13.1 2.1e-42 145.5 2.7 2.0 2 0 0 2 2 2 2 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_31 PF13847.6 gi|121637952|ref|YP_978176.1| - 1.1e-14 54.5 0.0 2e-14 53.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121637952|ref|YP_978176.1| - 1.5e-13 51.3 0.1 3.8e-13 50.0 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121637952|ref|YP_978176.1| - 3.6e-13 50.0 0.1 3e-12 47.0 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121637952|ref|YP_978176.1| - 5e-13 49.6 0.0 2.2e-11 44.3 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121637952|ref|YP_978176.1| - 2.2e-07 30.9 0.0 3.5e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|121637952|ref|YP_978176.1| - 7.7e-06 25.1 0.0 1.2e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) TehB PF03848.14 gi|121637952|ref|YP_978176.1| - 0.0036 16.7 0.0 0.0062 16.0 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB CMAS PF02353.20 gi|121637952|ref|YP_978176.1| - 0.005 16.2 0.0 0.0076 15.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TPMT PF05724.11 gi|121637952|ref|YP_978176.1| - 0.014 15.1 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) IL34 PF15036.6 gi|121637952|ref|YP_978176.1| - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Interleukin 34 Beta-lactamase2 PF13354.6 gi|121637953|ref|YP_978177.1| - 3.3e-39 134.6 0.0 4.2e-39 134.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 gi|121637953|ref|YP_978177.1| - 1.7e-19 70.2 1.8 3.3e-18 66.0 1.8 2.1 1 1 0 1 1 1 1 Beta-lactamase DUF4350 PF14258.6 gi|121637953|ref|YP_978177.1| - 0.098 13.1 0.1 0.23 11.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) Sigma70_r4_2 PF08281.12 gi|121637954|ref|YP_978178.1| - 2.2e-15 56.1 0.1 3.3e-15 55.5 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 gi|121637954|ref|YP_978178.1| - 6.9e-15 54.6 2.4 1.1e-14 53.9 1.2 2.0 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121637954|ref|YP_978178.1| - 2.7e-06 26.8 0.0 5.4e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121637954|ref|YP_978178.1| - 5.6e-05 23.1 0.3 8.2e-05 22.6 0.3 1.3 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 gi|121637954|ref|YP_978178.1| - 0.0042 16.8 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Dioxygenase_N PF04444.14 gi|121637954|ref|YP_978178.1| - 0.008 16.0 0.1 0.32 10.9 0.0 2.4 2 0 0 2 2 2 1 Catechol dioxygenase N terminus DUF134 PF02001.16 gi|121637954|ref|YP_978178.1| - 0.078 13.5 0.0 0.15 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF134 CHMI PF02962.15 gi|121637954|ref|YP_978178.1| - 0.15 12.4 0.0 0.4 11.0 0.0 1.8 1 0 0 1 1 1 0 5-carboxymethyl-2-hydroxymuconate isomerase CbiJ PF02571.14 gi|121637955|ref|YP_978179.1| - 7.5e-61 205.6 0.0 8.7e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK ATPgrasp_N PF18130.1 gi|121637955|ref|YP_978179.1| - 0.0045 17.5 0.5 1.4 9.5 0.1 2.7 3 0 0 3 3 3 2 ATP-grasp N-terminal domain TP_methylase PF00590.20 gi|121637956|ref|YP_978180.1| - 6e-43 147.3 3.5 6e-43 147.3 3.5 1.4 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|121637956|ref|YP_978180.1| - 0.0021 18.5 0.0 0.0033 17.8 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily TP_methylase PF00590.20 gi|121637957|ref|YP_978181.1| - 0.00012 22.1 0.1 0.00019 21.5 0.1 1.3 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_2 PF00891.18 gi|121637957|ref|YP_978181.1| - 0.003 16.9 0.0 0.05 12.9 0.0 2.5 3 0 0 3 3 3 1 O-methyltransferase domain MTS PF05175.14 gi|121637957|ref|YP_978181.1| - 0.14 11.7 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain PI-PLC-C1 PF16670.5 gi|121637959|ref|YP_978183.1| - 0.0014 17.7 0.2 0.0096 15.0 0.1 2.0 1 1 1 2 2 2 1 Phosphoinositide phospholipase C, Ca2+-dependent Phage_holin_3_6 PF07332.11 gi|121637960|ref|YP_978184.1| - 0.0072 16.4 0.4 0.01 15.8 0.4 1.3 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III DUF2563 PF10817.8 gi|121637963|ref|YP_978187.1| - 1.4e-58 195.9 8.3 1.6e-58 195.8 8.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2563) T7SS_ESX_EspC PF10824.8 gi|121637963|ref|YP_978187.1| - 0.0008 19.8 0.4 0.00088 19.7 0.4 1.2 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm Abhydrolase_8 PF06259.12 gi|121637964|ref|YP_978188.1| - 6.6e-31 107.3 2.7 6.6e-31 107.3 2.7 1.8 2 0 0 2 2 2 1 Alpha/beta hydrolase Abhydrolase_1 PF00561.20 gi|121637964|ref|YP_978188.1| - 0.0013 18.5 0.1 0.0034 17.1 0.1 1.8 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF2913 PF11140.8 gi|121637964|ref|YP_978188.1| - 0.086 12.6 0.3 0.14 11.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2913) TPR_14 PF13428.6 gi|121637964|ref|YP_978188.1| - 1.6 9.7 0.0 1.6 9.7 0.0 4.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 gi|121637964|ref|YP_978188.1| - 5.7 7.3 5.9 2.2 8.6 0.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF5631 PF18645.1 gi|121637967|ref|YP_978191.1| - 7.9e-38 128.7 1.7 7.9e-38 128.7 1.7 3.1 3 0 0 3 3 3 1 Family of unknown function (DUF5631) DUF5632 PF18646.1 gi|121637967|ref|YP_978191.1| - 8.2e-36 121.9 1.6 2.8e-35 120.2 1.6 2.0 1 0 0 1 1 1 1 Family of unknown function (DUF5632) Adaptin_binding PF10199.9 gi|121637969|ref|YP_978193.1| - 0.0052 17.4 0.8 0.0097 16.5 0.0 1.8 2 0 0 2 2 2 1 Alpha and gamma adaptin binding protein p34 DUF2203 PF09969.9 gi|121637969|ref|YP_978193.1| - 0.22 12.3 1.2 0.41 11.4 0.5 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) HTH_Tnp_1 PF01527.20 gi|121637970|ref|YP_978194.1| - 0.086 13.2 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Transposase HTH_21 PF13276.6 gi|121637971|ref|YP_978195.1| - 2.9e-09 36.9 0.9 6.2e-07 29.5 0.0 2.6 3 0 0 3 3 3 2 HTH-like domain rve_3 PF13683.6 gi|121637972|ref|YP_978196.1| - 0.0002 21.1 0.0 0.00027 20.7 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain Pkinase PF00069.25 gi|121637973|ref|YP_978197.1| - 7.1e-45 153.4 0.0 9.8e-45 153.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain PknH_C PF14032.6 gi|121637973|ref|YP_978197.1| - 1.4e-38 132.7 1.6 2.7e-38 131.7 0.0 2.3 3 0 0 3 3 3 1 PknH-like extracellular domain Pkinase_Tyr PF07714.17 gi|121637973|ref|YP_978197.1| - 1.4e-27 96.7 0.0 1.9e-27 96.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121637973|ref|YP_978197.1| - 0.00062 19.8 2.9 0.67 9.8 0.0 3.2 1 1 2 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|121637973|ref|YP_978197.1| - 0.0017 17.2 0.0 0.0041 16.0 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 gi|121637973|ref|YP_978197.1| - 0.011 15.1 0.1 0.047 13.1 0.0 1.9 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_M24 PF00557.24 gi|121637974|ref|YP_978198.1| - 1.1e-61 208.2 0.7 1.4e-61 207.9 0.7 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|121637974|ref|YP_978198.1| - 1.6e-11 45.0 0.1 4.3e-11 43.6 0.0 1.7 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain 5_3_exonuc_N PF02739.16 gi|121637975|ref|YP_978199.1| - 1.5e-48 164.7 0.0 2.2e-48 164.1 0.0 1.3 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 gi|121637975|ref|YP_978199.1| - 6.9e-19 68.3 0.0 1.1e-18 67.7 0.0 1.3 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.7 gi|121637975|ref|YP_978199.1| - 0.00061 19.8 0.1 0.0019 18.3 0.0 1.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|121637975|ref|YP_978199.1| - 0.006 17.2 0.1 0.014 16.0 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 gi|121637975|ref|YP_978199.1| - 0.043 13.7 0.2 0.13 12.2 0.2 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF4333 PF14230.6 gi|121637976|ref|YP_978200.1| - 2.6e-26 91.7 2.4 3.9e-26 91.1 2.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4333) Collagen PF01391.18 gi|121637976|ref|YP_978200.1| - 0.014 15.1 16.7 0.014 15.1 16.7 1.8 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) DSHCT PF08148.12 gi|121637977|ref|YP_978201.1| - 1.1e-40 139.0 0.0 1.2e-39 135.6 0.0 2.6 3 0 0 3 3 3 1 DSHCT (NUC185) domain DEAD PF00270.29 gi|121637977|ref|YP_978201.1| - 3.8e-19 69.1 0.0 1e-18 67.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|121637977|ref|YP_978201.1| - 2.1e-07 31.1 0.0 3.3e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|121637977|ref|YP_978201.1| - 8.4e-06 26.1 0.0 2.4e-05 24.7 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain rRNA_proc-arch PF13234.6 gi|121637977|ref|YP_978201.1| - 0.00029 20.9 0.0 0.054 13.4 0.0 2.2 2 0 0 2 2 2 2 rRNA-processing arch domain AAA_22 PF13401.6 gi|121637977|ref|YP_978201.1| - 0.043 14.1 0.0 0.21 11.9 0.0 2.2 1 1 0 1 1 1 0 AAA domain TatC PF00902.18 gi|121637978|ref|YP_978202.1| - 1.4e-59 201.4 11.0 1.7e-59 201.1 11.0 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) GPI2 PF06432.11 gi|121637978|ref|YP_978202.1| - 0.27 10.6 2.2 9.2 5.6 0.0 3.0 2 1 1 3 3 3 0 Phosphatidylinositol N-acetylglucosaminyltransferase MttA_Hcf106 PF02416.16 gi|121637979|ref|YP_978203.1| - 2.2e-24 84.5 0.1 2.8e-24 84.2 0.1 1.1 1 0 0 1 1 1 1 mttA/Hcf106 family HTH_17 PF12728.7 gi|121637979|ref|YP_978203.1| - 0.14 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain WYL PF13280.6 gi|121637980|ref|YP_978204.1| - 1.7e-31 109.5 0.0 3.4e-31 108.6 0.0 1.5 2 0 0 2 2 2 1 WYL domain HTH_Mga PF08280.11 gi|121637980|ref|YP_978204.1| - 0.031 14.3 0.0 0.055 13.5 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain WYL PF13280.6 gi|121637981|ref|YP_978205.1| - 1.2e-28 100.3 0.0 1.8e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 WYL domain CoA_binding_2 PF13380.6 gi|121637981|ref|YP_978205.1| - 0.037 14.5 0.1 0.38 11.3 0.1 2.5 1 1 0 1 1 1 0 CoA binding domain Pup_ligase PF03136.15 gi|121637982|ref|YP_978206.1| - 2e-159 531.3 0.5 4e-159 530.4 0.5 1.4 1 1 0 1 1 1 1 Pup-ligase protein PE PF00934.20 gi|121637983|ref|YP_978207.1| - 2.9e-35 120.5 16.9 4.1e-35 120.0 16.9 1.2 1 0 0 1 1 1 1 PE family DUF222 PF02720.17 gi|121637984|ref|YP_978208.1| - 7.9e-55 186.5 18.0 7.9e-55 186.5 18.0 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF222) SNF2_N PF00176.23 gi|121637985|ref|YP_978209.1| - 1.3e-58 198.4 0.0 1.9e-58 197.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.8 gi|121637985|ref|YP_978209.1| - 1.4e-41 141.5 1.1 9.5e-41 138.9 0.4 2.6 2 0 0 2 2 2 1 SNF2 Helicase protein Helicase_C PF00271.31 gi|121637985|ref|YP_978209.1| - 1.5e-15 57.5 0.0 2.6e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SWIM PF04434.17 gi|121637986|ref|YP_978210.1| - 8.2e-07 28.6 0.2 1.4e-06 27.8 0.2 1.4 1 0 0 1 1 1 1 SWIM zinc finger TipAS PF07739.13 gi|121637986|ref|YP_978210.1| - 0.17 12.5 0.0 0.34 11.5 0.0 1.4 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain PIN PF01850.21 gi|121637987|ref|YP_978211.1| - 8.4e-15 55.4 0.0 9.5e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121637987|ref|YP_978211.1| - 0.0027 17.4 0.0 0.0064 16.2 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5615) PE PF00934.20 gi|121637989|ref|YP_978213.1| - 7.6e-28 96.7 3.4 8.4e-28 96.5 3.4 1.0 1 0 0 1 1 1 1 PE family PPE PF00823.19 gi|121637990|ref|YP_978214.1| - 3.9e-57 192.8 9.8 5.1e-57 192.4 9.8 1.1 1 0 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121637990|ref|YP_978214.1| - 0.0098 16.1 2.8 0.027 14.7 2.8 1.7 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Proteasome PF00227.26 gi|121637991|ref|YP_978215.1| - 3.7e-39 134.2 0.1 4.5e-39 133.9 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome PF00227.26 gi|121637992|ref|YP_978216.1| - 5.4e-27 94.5 0.1 7e-27 94.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit MCH PF02289.16 gi|121637992|ref|YP_978216.1| - 0.043 13.1 0.0 0.063 12.5 0.0 1.2 1 0 0 1 1 1 0 Cyclohydrolase (MCH) Pup PF05639.11 gi|121637993|ref|YP_978217.1| - 2.1e-22 79.8 4.0 2.2e-22 79.7 4.0 1.1 1 0 0 1 1 1 1 Pup-like protein YtxH PF12732.7 gi|121637993|ref|YP_978217.1| - 0.011 16.2 0.2 0.015 15.9 0.2 1.2 1 0 0 1 1 1 0 YtxH-like protein TH1 PF04858.13 gi|121637993|ref|YP_978217.1| - 0.047 12.3 0.5 0.047 12.3 0.5 1.0 1 0 0 1 1 1 0 TH1 protein Pup_ligase PF03136.15 gi|121637994|ref|YP_978218.1| - 7.3e-179 595.4 0.0 8.3e-179 595.2 0.0 1.0 1 0 0 1 1 1 1 Pup-ligase protein Zip PF02535.22 gi|121637995|ref|YP_978219.1| - 0.27 10.4 4.2 0.83 8.8 4.2 1.8 1 0 0 1 1 1 0 ZIP Zinc transporter AAA PF00004.29 gi|121637997|ref|YP_978221.1| - 4.2e-49 166.4 0.1 4.5e-48 163.0 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_OB_N PF17758.1 gi|121637997|ref|YP_978221.1| - 2.6e-25 87.8 0.3 1.2e-24 85.7 0.1 2.3 3 0 0 3 3 2 1 Proteasomal ATPase OB N-terminal domain Prot_ATP_ID_OB PF16450.5 gi|121637997|ref|YP_978221.1| - 1.2e-20 73.2 0.2 8.4e-19 67.3 0.0 2.9 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_16 PF13191.6 gi|121637997|ref|YP_978221.1| - 4.9e-09 36.8 0.5 1e-06 29.2 0.0 3.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 gi|121637997|ref|YP_978221.1| - 1.7e-05 25.0 0.0 3.7e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Zeta_toxin PF06414.12 gi|121637997|ref|YP_978221.1| - 8.3e-05 22.0 0.0 0.00019 20.8 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|121637997|ref|YP_978221.1| - 0.00011 22.4 0.0 0.00023 21.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|121637997|ref|YP_978221.1| - 0.00021 21.7 0.0 0.00054 20.3 0.0 1.7 1 0 0 1 1 1 1 RNA helicase AAA_22 PF13401.6 gi|121637997|ref|YP_978221.1| - 0.00022 21.5 0.2 0.0016 18.7 0.0 2.7 3 1 0 3 3 1 1 AAA domain RuvB_N PF05496.12 gi|121637997|ref|YP_978221.1| - 0.0003 20.6 0.0 0.0021 17.8 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|121637997|ref|YP_978221.1| - 0.00052 20.0 0.0 0.0017 18.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|121637997|ref|YP_978221.1| - 0.0023 17.3 0.0 0.0058 16.0 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ATPase_2 PF01637.18 gi|121637997|ref|YP_978221.1| - 0.0025 17.8 0.0 0.042 13.8 0.0 2.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 gi|121637997|ref|YP_978221.1| - 0.0056 16.6 0.0 0.079 12.9 0.0 2.3 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|121637997|ref|YP_978221.1| - 0.0093 16.0 0.0 0.026 14.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|121637997|ref|YP_978221.1| - 0.011 16.3 0.0 0.042 14.4 0.0 2.1 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|121637997|ref|YP_978221.1| - 0.012 16.2 0.0 0.066 13.7 0.0 2.2 2 1 1 3 3 1 0 ABC transporter TIP49 PF06068.13 gi|121637997|ref|YP_978221.1| - 0.013 14.8 0.0 0.021 14.0 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_lid_3 PF17862.1 gi|121637997|ref|YP_978221.1| - 0.022 14.5 0.3 0.72 9.7 0.0 2.8 2 0 0 2 2 2 0 AAA+ lid domain IstB_IS21 PF01695.17 gi|121637997|ref|YP_978221.1| - 0.023 14.5 0.0 0.054 13.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 gi|121637997|ref|YP_978221.1| - 0.026 14.0 0.0 0.055 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region ZapB PF06005.12 gi|121637997|ref|YP_978221.1| - 0.039 14.4 1.5 0.66 10.5 0.2 2.7 2 0 0 2 2 2 0 Cell division protein ZapB Sigma54_activ_2 PF14532.6 gi|121637997|ref|YP_978221.1| - 0.04 14.0 0.0 0.33 11.1 0.0 2.4 3 0 0 3 3 2 0 Sigma-54 interaction domain AAA_25 PF13481.6 gi|121637997|ref|YP_978221.1| - 0.042 13.4 0.0 0.18 11.4 0.0 2.1 2 0 0 2 2 1 0 AAA domain AAA_23 PF13476.6 gi|121637997|ref|YP_978221.1| - 0.043 14.3 0.4 0.3 11.5 0.0 2.3 3 0 0 3 3 2 0 AAA domain FliJ PF02050.16 gi|121637997|ref|YP_978221.1| - 0.048 13.9 0.7 0.1 12.8 0.4 1.6 2 0 0 2 2 1 0 Flagellar FliJ protein DUF815 PF05673.13 gi|121637997|ref|YP_978221.1| - 0.057 12.6 0.0 0.26 10.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NTPase_1 PF03266.15 gi|121637997|ref|YP_978221.1| - 0.063 13.2 0.0 0.24 11.3 0.0 2.1 1 0 0 1 1 1 0 NTPase JAKMIP_CC3 PF16034.5 gi|121637997|ref|YP_978221.1| - 0.089 12.7 0.4 0.16 11.9 0.4 1.4 1 0 0 1 1 1 0 JAKMIP CC3 domain AAA_19 PF13245.6 gi|121637997|ref|YP_978221.1| - 0.11 12.8 0.2 1.7 9.0 0.0 2.6 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|121637997|ref|YP_978221.1| - 0.11 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain APG6_N PF17675.1 gi|121637997|ref|YP_978221.1| - 0.13 12.8 3.6 0.29 11.7 3.6 1.6 1 0 0 1 1 1 0 Apg6 coiled-coil region AAA_24 PF13479.6 gi|121637997|ref|YP_978221.1| - 0.14 11.8 0.0 0.47 10.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|121637997|ref|YP_978221.1| - 0.15 11.2 0.0 0.3 10.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain Parvo_NS1 PF01057.17 gi|121637997|ref|YP_978221.1| - 0.2 10.7 0.0 0.37 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 FUSC-like PF12805.7 gi|121637997|ref|YP_978221.1| - 0.21 10.7 0.0 0.33 10.0 0.0 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS DUF465 PF04325.13 gi|121637997|ref|YP_978221.1| - 0.23 11.5 5.2 2.3 8.3 3.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF465) TMF_TATA_bd PF12325.8 gi|121637997|ref|YP_978221.1| - 0.75 10.0 3.5 1.2 9.4 2.0 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding bZIP_1 PF00170.21 gi|121637997|ref|YP_978221.1| - 1.3 9.2 5.2 0.34 11.0 0.6 2.2 2 0 0 2 2 2 0 bZIP transcription factor Nnf1 PF03980.14 gi|121637997|ref|YP_978221.1| - 3.2 8.2 7.8 6.2 7.2 5.9 2.4 3 0 0 3 3 2 0 Nnf1 GAS PF13851.6 gi|121637997|ref|YP_978221.1| - 4.4 6.6 6.4 1.7 7.9 1.4 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding HSCB_C PF07743.13 gi|121637997|ref|YP_978221.1| - 7.3 7.2 7.5 2.6 8.6 3.1 2.7 3 1 1 4 4 2 0 HSCB C-terminal oligomerisation domain LPAM_1 PF08139.12 gi|121637998|ref|YP_978222.1| - 1.1 9.8 2.8 2.7 8.6 2.8 1.7 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF503 PF04456.12 gi|121637999|ref|YP_978223.1| - 1e-30 105.4 0.0 1.1e-30 105.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF503) DUF604 PF04646.12 gi|121637999|ref|YP_978223.1| - 0.15 11.4 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF604 GCD14_N PF14801.6 gi|121638000|ref|YP_978224.1| - 7.4e-26 89.7 0.1 1.4e-25 88.9 0.1 1.5 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term GCD14 PF08704.10 gi|121638000|ref|YP_978224.1| - 5.8e-21 75.3 0.0 8.5e-20 71.5 0.0 2.1 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_25 PF13649.6 gi|121638000|ref|YP_978224.1| - 6.2e-08 33.2 0.0 1e-07 32.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|121638000|ref|YP_978224.1| - 4.2e-07 29.9 0.0 6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|121638000|ref|YP_978224.1| - 4.4e-06 26.6 0.0 6.1e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638000|ref|YP_978224.1| - 6.9e-05 23.4 0.0 0.00013 22.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|121638000|ref|YP_978224.1| - 0.0003 19.9 0.0 0.00039 19.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.12 gi|121638000|ref|YP_978224.1| - 0.00055 20.6 0.0 0.00096 19.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|121638000|ref|YP_978224.1| - 0.0048 17.9 0.0 0.01 16.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638000|ref|YP_978224.1| - 0.0048 16.8 0.0 0.0091 15.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain PDDEXK_1 PF12705.7 gi|121638001|ref|YP_978225.1| - 4.5e-38 131.6 0.0 5.1e-38 131.4 0.0 1.0 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF2800 PF10926.8 gi|121638001|ref|YP_978225.1| - 2.1e-06 27.3 0.0 4.4e-06 26.2 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2800) DUF4126 PF13548.6 gi|121638002|ref|YP_978226.1| - 1.1e-05 25.2 19.0 1.3e-05 24.9 19.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4126) Rick_17kDa_Anti PF05433.15 gi|121638002|ref|YP_978226.1| - 1.9e-05 24.5 15.0 1.9e-05 24.5 15.0 2.6 3 0 0 3 3 3 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 gi|121638002|ref|YP_978226.1| - 0.00099 19.1 13.8 0.00099 19.1 13.8 2.4 3 0 0 3 3 3 1 Glycine zipper HisG PF01634.18 gi|121638003|ref|YP_978227.1| - 2.8e-39 134.7 0.0 3.6e-39 134.3 0.0 1.1 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|121638003|ref|YP_978227.1| - 2.1e-24 85.4 0.0 5.1e-24 84.2 0.0 1.6 2 0 0 2 2 2 1 HisG, C-terminal domain DUF1990 PF09348.10 gi|121638003|ref|YP_978227.1| - 0.059 13.4 0.0 0.088 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1990) PRA-PH PF01503.17 gi|121638004|ref|YP_978228.1| - 7.1e-08 32.8 0.1 8.1e-08 32.6 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|121638004|ref|YP_978228.1| - 6.7e-06 26.2 0.3 2.7e-05 24.2 0.2 1.8 2 0 0 2 2 2 1 MazG nucleotide pyrophosphohydrolase domain PPE PF00823.19 gi|121638005|ref|YP_978229.1| - 1e-45 155.7 18.4 3.2e-45 154.0 18.4 1.9 1 1 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121638005|ref|YP_978229.1| - 0.043 14.0 1.0 0.043 14.0 1.0 1.8 2 0 0 2 2 2 0 Proteins of 100 residues with WXG S-methyl_trans PF02574.16 gi|121638006|ref|YP_978230.1| - 1.5e-59 202.0 0.0 5.3e-59 200.2 0.0 1.9 2 0 0 2 2 2 1 Homocysteine S-methyltransferase Pterin_bind PF00809.22 gi|121638006|ref|YP_978230.1| - 3.2e-48 164.5 0.4 5.6e-48 163.7 0.4 1.4 1 0 0 1 1 1 1 Pterin binding enzyme Met_synt_B12 PF02965.17 gi|121638006|ref|YP_978230.1| - 9.8e-33 113.8 0.0 1.8e-32 112.9 0.0 1.4 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain B12-binding_2 PF02607.17 gi|121638006|ref|YP_978230.1| - 1.3e-25 89.6 0.2 5.2e-25 87.7 0.2 2.2 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.19 gi|121638006|ref|YP_978230.1| - 3.9e-20 72.1 1.3 5.5e-19 68.4 0.4 3.3 4 0 0 4 4 4 1 B12 binding domain HTH_39 PF14090.6 gi|121638006|ref|YP_978230.1| - 0.1 12.4 0.0 0.45 10.3 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain PAC2 PF09754.9 gi|121638007|ref|YP_978231.1| - 6.9e-54 183.1 0.0 8.4e-54 182.8 0.0 1.1 1 0 0 1 1 1 1 PAC2 family Ndr PF03096.14 gi|121638007|ref|YP_978231.1| - 0.11 11.2 0.0 0.18 10.5 0.0 1.3 1 0 0 1 1 1 0 Ndr family AA_permease PF00324.21 gi|121638009|ref|YP_978233.1| - 1.4e-103 347.1 39.8 1.7e-103 346.8 39.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|121638009|ref|YP_978233.1| - 1.4e-35 123.0 39.5 1.7e-35 122.7 39.5 1.0 1 0 0 1 1 1 1 Amino acid permease UL42 PF17638.2 gi|121638010|ref|YP_978234.1| - 0.078 13.0 0.6 0.098 12.6 0.6 1.2 1 0 0 1 1 1 0 HCMV UL42 DUF2244 PF10003.9 gi|121638010|ref|YP_978234.1| - 0.14 11.8 4.4 0.14 11.8 4.4 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Phage_holin_3_6 PF07332.11 gi|121638010|ref|YP_978234.1| - 0.21 11.6 5.2 0.24 11.4 5.2 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4337 PF14235.6 gi|121638010|ref|YP_978234.1| - 0.51 10.5 3.3 0.56 10.3 3.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) adh_short PF00106.25 gi|121638011|ref|YP_978235.1| - 1.8e-45 154.8 0.1 2.6e-45 154.3 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638011|ref|YP_978235.1| - 3.6e-37 128.2 0.5 5e-37 127.7 0.5 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121638011|ref|YP_978235.1| - 2.8e-11 43.7 0.4 4.6e-11 43.0 0.4 1.3 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 gi|121638011|ref|YP_978235.1| - 0.025 13.7 0.0 0.029 13.5 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 gi|121638011|ref|YP_978235.1| - 0.094 12.1 0.2 0.25 10.7 0.1 1.7 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|121638011|ref|YP_978235.1| - 0.11 11.9 0.3 0.16 11.4 0.3 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family tRNA-synt_1e PF01406.19 gi|121638012|ref|YP_978236.1| - 2e-82 276.9 0.0 2.5e-82 276.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|121638012|ref|YP_978236.1| - 6e-06 25.2 0.0 0.036 12.8 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|121638012|ref|YP_978236.1| - 0.028 12.7 0.0 0.044 12.0 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) Inositol_P PF00459.25 gi|121638013|ref|YP_978237.1| - 5.7e-28 98.2 0.1 4.9e-27 95.1 0.1 1.9 1 1 0 1 1 1 1 Inositol monophosphatase family RHH_1 PF01402.21 gi|121638014|ref|YP_978238.1| - 8.6e-05 22.3 0.6 0.00013 21.8 0.6 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family PI3_PI4_kinase PF00454.27 gi|121638015|ref|YP_978239.1| - 6.2e-05 22.9 0.0 9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF3090 PF11290.8 gi|121638016|ref|YP_978240.1| - 9.3e-68 227.4 0.0 1e-67 227.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3090) His_Phos_1 PF00300.22 gi|121638017|ref|YP_978241.1| - 2.2e-44 151.5 0.2 2.6e-44 151.2 0.2 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) BacA PF02673.18 gi|121638018|ref|YP_978242.1| - 2.1e-76 257.0 14.0 2.5e-76 256.8 14.0 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA DNA_processg_A PF02481.15 gi|121638018|ref|YP_978242.1| - 0.021 14.1 0.0 0.036 13.3 0.0 1.3 1 0 0 1 1 1 0 DNA recombination-mediator protein A DUF3290 PF11694.8 gi|121638018|ref|YP_978242.1| - 0.22 11.5 0.1 0.22 11.5 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) DUF2474 PF10617.9 gi|121638018|ref|YP_978242.1| - 0.25 11.2 6.0 1.1 9.2 2.9 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2474) DUF4491 PF14898.6 gi|121638018|ref|YP_978242.1| - 0.88 10.1 6.4 0.17 12.3 0.5 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4491) PetG PF02529.15 gi|121638018|ref|YP_978242.1| - 2.5 8.0 5.7 1.5 8.7 0.1 3.3 4 0 0 4 4 4 0 Cytochrome B6-F complex subunit 5 VirB3 PF05101.13 gi|121638018|ref|YP_978242.1| - 9 6.6 12.6 10 6.4 6.5 3.4 2 1 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein SGL PF08450.12 gi|121638020|ref|YP_978244.1| - 0.00015 21.4 0.1 0.24 10.9 0.0 2.9 2 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|121638020|ref|YP_978244.1| - 0.00016 21.6 0.0 0.82 9.8 0.0 3.9 3 1 0 3 3 3 2 NHL repeat DHO_dh PF01180.21 gi|121638021|ref|YP_978245.1| - 1.9e-99 332.6 0.0 2.2e-99 332.4 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase PBP PF01161.20 gi|121638022|ref|YP_978246.1| - 3.9e-34 117.8 0.0 4.7e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Peptidase_M20 PF01546.28 gi|121638023|ref|YP_978247.1| - 1.4e-38 132.6 0.9 2.5e-36 125.3 0.2 2.9 2 1 0 2 2 2 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|121638023|ref|YP_978247.1| - 8.9e-16 57.8 0.0 1.6e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|121638023|ref|YP_978247.1| - 2.5e-10 40.4 0.1 1.3e-08 34.7 0.1 2.7 2 1 0 2 2 2 1 Peptidase family M28 ParE_toxin PF05016.15 gi|121638024|ref|YP_978248.1| - 1.9e-10 41.2 0.5 2.2e-10 41.0 0.5 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Pribosyltran PF00156.27 gi|121638025|ref|YP_978249.1| - 3.7e-23 81.8 0.0 3.7e-22 78.5 0.0 2.0 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121638025|ref|YP_978249.1| - 2.8e-05 23.7 0.1 4e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|121638025|ref|YP_978249.1| - 0.0002 20.9 0.0 0.0055 16.2 0.0 2.3 2 0 0 2 2 2 1 Phosphoribosyl transferase DUF308 PF03729.13 gi|121638026|ref|YP_978250.1| - 0.014 15.7 4.6 0.019 15.3 4.6 1.1 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) DUF2207 PF09972.9 gi|121638026|ref|YP_978250.1| - 0.39 9.4 1.6 0.47 9.2 1.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 gi|121638026|ref|YP_978250.1| - 0.44 10.6 9.9 0.59 10.2 9.9 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III CrgA PF06781.12 gi|121638026|ref|YP_978250.1| - 7.9 6.6 5.7 4.3 7.5 0.2 2.3 1 1 1 2 2 2 0 Cell division protein CrgA DivIVA PF05103.13 gi|121638027|ref|YP_978251.1| - 1.9e-20 73.3 22.0 3.3e-12 46.6 0.0 3.2 2 1 1 3 3 3 3 DivIVA protein Apolipoprotein PF01442.18 gi|121638027|ref|YP_978251.1| - 0.00079 19.4 25.5 0.0009 19.2 21.8 2.1 2 0 0 2 2 2 1 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 gi|121638027|ref|YP_978251.1| - 0.025 15.2 8.5 0.025 15.2 8.5 3.4 2 1 3 5 5 5 0 Bacterial protein of unknown function (DUF883) HrpE PF06188.12 gi|121638027|ref|YP_978251.1| - 0.041 13.8 21.1 0.76 9.6 10.9 3.2 2 1 1 3 3 3 0 HrpE/YscL/FliH and V-type ATPase subunit E Cnn_1N PF07989.11 gi|121638027|ref|YP_978251.1| - 0.099 12.8 3.2 0.64 10.2 0.0 3.1 2 1 2 4 4 4 0 Centrosomin N-terminal motif 1 Shugoshin_N PF07558.11 gi|121638027|ref|YP_978251.1| - 0.17 11.8 2.8 0.41 10.6 2.8 1.6 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region UPF0242 PF06785.11 gi|121638027|ref|YP_978251.1| - 0.24 11.5 11.1 3 7.9 8.5 2.4 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Pox_A_type_inc PF04508.12 gi|121638027|ref|YP_978251.1| - 0.48 10.4 4.6 0.86 9.6 0.9 3.0 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF4407 PF14362.6 gi|121638027|ref|YP_978251.1| - 1.2 8.4 15.6 1.9 7.7 15.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ApoLp-III PF07464.11 gi|121638027|ref|YP_978251.1| - 2.8 8.0 9.2 3.7 7.6 6.8 2.1 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) ATP-synt_B PF00430.18 gi|121638027|ref|YP_978251.1| - 3.8 7.6 28.0 0.5 10.5 18.4 2.4 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) YGGT PF02325.17 gi|121638028|ref|YP_978252.1| - 2.8e-11 43.6 8.5 3.7e-11 43.3 8.5 1.2 1 0 0 1 1 1 1 YGGT family DUF4051 PF13260.6 gi|121638028|ref|YP_978252.1| - 0.54 10.0 2.9 0.55 10.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) SepF PF04472.12 gi|121638029|ref|YP_978253.1| - 2.7e-24 85.2 0.0 4.4e-24 84.5 0.0 1.4 1 0 0 1 1 1 1 Cell division protein SepF Ala_racemase_N PF01168.20 gi|121638030|ref|YP_978254.1| - 1.3e-14 54.4 0.8 1.6e-14 54.1 0.8 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Cu-oxidase_4 PF02578.15 gi|121638031|ref|YP_978255.1| - 7.6e-71 238.4 0.4 8.7e-71 238.2 0.4 1.0 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase Tubulin PF00091.25 gi|121638032|ref|YP_978256.1| - 1e-39 136.8 0.1 1.6e-39 136.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|121638032|ref|YP_978256.1| - 3.7e-35 120.1 3.4 7e-35 119.2 1.7 2.3 2 0 0 2 2 2 1 FtsZ family, C-terminal domain Tubulin_2 PF13809.6 gi|121638032|ref|YP_978256.1| - 0.18 11.0 4.2 2.1 7.4 0.4 2.3 1 1 1 2 2 2 0 Tubulin like POTRA_1 PF08478.10 gi|121638033|ref|YP_978257.1| - 4e-15 55.9 0.5 7.2e-15 55.1 0.5 1.4 1 0 0 1 1 1 1 POTRA domain, FtsQ-type FtsQ PF03799.15 gi|121638033|ref|YP_978257.1| - 4.8e-08 33.8 0.0 1.5e-07 32.2 0.0 1.9 2 0 0 2 2 2 1 Cell division protein FtsQ H2TH PF06831.14 gi|121638033|ref|YP_978257.1| - 0.025 14.5 0.0 0.059 13.4 0.0 1.6 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain DUF3742 PF12553.8 gi|121638033|ref|YP_978257.1| - 0.077 13.1 1.5 0.17 12.0 1.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Mur_ligase_M PF08245.12 gi|121638034|ref|YP_978258.1| - 3.5e-26 92.4 0.0 5.2e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase PF01225.25 gi|121638034|ref|YP_978258.1| - 8e-24 83.8 0.2 7.6e-23 80.7 0.2 2.5 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_C PF02875.21 gi|121638034|ref|YP_978258.1| - 1e-23 83.4 0.1 3.9e-23 81.5 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Glyco_tran_28_C PF04101.16 gi|121638035|ref|YP_978259.1| - 2.3e-41 141.5 0.0 3.3e-41 141.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.20 gi|121638035|ref|YP_978259.1| - 4.2e-40 137.0 0.0 9e-40 135.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_transf_4 PF13439.6 gi|121638035|ref|YP_978259.1| - 0.00051 20.1 5.0 0.0014 18.6 2.2 2.3 1 1 0 2 2 2 1 Glycosyltransferase Family 4 FTSW_RODA_SPOVE PF01098.19 gi|121638036|ref|YP_978260.1| - 7.4e-126 419.9 17.1 8.6e-126 419.7 17.1 1.0 1 0 0 1 1 1 1 Cell cycle protein TMEM192 PF14802.6 gi|121638036|ref|YP_978260.1| - 0.033 13.3 0.0 0.067 12.3 0.0 1.4 1 0 0 1 1 1 0 TMEM192 family DUF872 PF05915.12 gi|121638036|ref|YP_978260.1| - 3.2 8.0 4.6 8.9 6.5 0.2 2.9 2 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) EMP70 PF02990.16 gi|121638036|ref|YP_978260.1| - 3.5 6.2 4.6 4.1 5.9 3.4 1.6 2 0 0 2 2 2 0 Endomembrane protein 70 Mur_ligase_M PF08245.12 gi|121638037|ref|YP_978261.1| - 9.4e-21 74.7 0.0 1.3e-20 74.2 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|121638037|ref|YP_978261.1| - 1.9e-11 44.1 0.5 7.6e-11 42.1 0.2 2.2 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Glycos_transf_4 PF00953.21 gi|121638038|ref|YP_978262.1| - 9.4e-39 132.9 12.0 9.4e-39 132.9 12.0 2.0 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 gi|121638038|ref|YP_978262.1| - 3.5e-05 23.1 0.1 3.5e-05 23.1 0.1 2.2 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Mur_ligase_M PF08245.12 gi|121638039|ref|YP_978263.1| - 2.9e-39 135.1 0.0 4.6e-39 134.4 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|121638039|ref|YP_978263.1| - 5.7e-28 97.0 0.3 2.7e-27 94.8 0.1 2.2 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 gi|121638039|ref|YP_978263.1| - 8.1e-10 38.9 1.6 1.9e-09 37.7 0.4 2.3 2 0 0 2 2 2 1 Mur ligase family, catalytic domain DUF108 PF01958.18 gi|121638039|ref|YP_978263.1| - 0.17 12.3 0.2 0.17 12.3 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function DUF108 MFS_2 PF13347.6 gi|121638039|ref|YP_978263.1| - 0.18 10.3 0.8 0.24 9.9 0.8 1.1 1 0 0 1 1 1 0 MFS/sugar transport protein HTH_Tnp_ISL3 PF13542.6 gi|121638039|ref|YP_978263.1| - 0.59 9.6 6.4 4.9 6.6 0.1 3.6 4 0 0 4 4 4 0 Helix-turn-helix domain of transposase family ISL3 Mur_ligase_M PF08245.12 gi|121638040|ref|YP_978264.1| - 2.6e-46 158.1 0.0 3.5e-46 157.6 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|121638040|ref|YP_978264.1| - 5.8e-25 87.4 0.1 5.1e-23 81.2 0.0 2.9 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 gi|121638040|ref|YP_978264.1| - 4.5e-10 39.7 0.1 1.9e-09 37.7 0.1 2.2 1 0 0 1 1 1 1 Mur ligase family, catalytic domain DUF1611 PF07755.11 gi|121638040|ref|YP_978264.1| - 0.032 13.5 0.8 0.12 11.6 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain FUSC-like PF12805.7 gi|121638040|ref|YP_978264.1| - 0.078 12.0 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS CMD PF02627.20 gi|121638041|ref|YP_978265.1| - 1.8e-09 37.5 8.0 7.1e-09 35.6 3.1 3.2 3 0 0 3 3 3 1 Carboxymuconolactone decarboxylase family TetR_N PF00440.23 gi|121638042|ref|YP_978266.1| - 5.2e-10 39.0 1.2 7.2e-10 38.5 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_31 PF13560.6 gi|121638042|ref|YP_978266.1| - 0.0058 17.0 0.2 0.019 15.3 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain TetR_C_21 PF17926.1 gi|121638042|ref|YP_978266.1| - 0.016 15.4 0.5 0.033 14.3 0.5 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_13 PF16925.5 gi|121638042|ref|YP_978266.1| - 0.028 14.4 0.0 0.045 13.7 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 gi|121638042|ref|YP_978266.1| - 0.049 13.9 6.7 0.074 13.4 6.1 1.8 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_24 PF13412.6 gi|121638042|ref|YP_978266.1| - 0.06 12.9 0.0 0.16 11.5 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Bac_luciferase PF00296.20 gi|121638043|ref|YP_978267.1| - 2.7e-41 142.0 8.8 3.4e-41 141.7 8.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase PE PF00934.20 gi|121638044|ref|YP_978268.1| - 1.9e-35 121.0 16.7 2.8e-35 120.5 16.7 1.3 1 0 0 1 1 1 1 PE family Transpeptidase PF00905.22 gi|121638045|ref|YP_978269.1| - 2.6e-89 299.5 0.0 3.5e-89 299.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 gi|121638045|ref|YP_978269.1| - 3.2e-11 43.9 0.2 2.5e-09 37.7 0.2 2.3 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain Beta-lactamase2 PF13354.6 gi|121638045|ref|YP_978269.1| - 0.00029 20.5 0.0 0.0018 17.9 0.0 2.2 1 1 0 1 1 1 1 Beta-lactamase enzyme family CHASE3 PF05227.13 gi|121638045|ref|YP_978269.1| - 0.12 12.2 2.9 0.085 12.8 0.5 2.0 2 0 0 2 2 2 0 CHASE3 domain LapA_dom PF06305.11 gi|121638046|ref|YP_978270.1| - 0.23 11.3 0.0 0.42 10.5 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Methyltransf_5 PF01795.19 gi|121638047|ref|YP_978271.1| - 8.1e-119 396.7 0.0 9.5e-119 396.5 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_25 PF13649.6 gi|121638047|ref|YP_978271.1| - 0.011 16.4 0.0 0.027 15.2 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain MraZ PF02381.18 gi|121638048|ref|YP_978272.1| - 3.1e-45 152.0 0.0 5.7e-22 77.5 0.0 2.0 2 0 0 2 2 2 2 MraZ protein, putative antitoxin-like DUF3040 PF11239.8 gi|121638049|ref|YP_978273.1| - 1.2e-28 99.2 1.5 2.2e-28 98.4 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3040) DUF3784 PF12650.7 gi|121638049|ref|YP_978273.1| - 0.084 13.1 1.6 0.13 12.5 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) FR47 PF08445.10 gi|121638050|ref|YP_978274.1| - 1e-07 31.8 0.1 5.7e-07 29.4 0.0 2.0 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_7 PF13508.7 gi|121638050|ref|YP_978274.1| - 1.5e-05 25.3 0.0 2.5e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121638050|ref|YP_978274.1| - 4e-05 23.6 0.0 6.4e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121638050|ref|YP_978274.1| - 6.8e-05 23.1 0.0 0.00011 22.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DUF834 PF05754.14 gi|121638051|ref|YP_978275.1| - 0.026 14.5 0.1 0.14 12.2 0.1 2.3 1 0 0 1 1 1 0 Domain of unknown function (DUF834) polyprenyl_synt PF00348.17 gi|121638053|ref|YP_978277.1| - 2e-47 161.4 0.0 2.5e-47 161.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase EpsG PF14897.6 gi|121638054|ref|YP_978278.1| - 0.012 14.9 5.0 0.05 12.9 4.8 1.9 1 1 0 1 1 1 0 EpsG family Rv2175c_C PF18367.1 gi|121638055|ref|YP_978279.1| - 1.9e-29 101.5 0.4 3.2e-29 100.8 0.1 1.5 2 0 0 2 2 2 1 Rv2175c C-terminal domain of unknown function HTH_17 PF12728.7 gi|121638055|ref|YP_978279.1| - 0.0018 18.4 0.0 0.0032 17.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Pkinase PF00069.25 gi|121638056|ref|YP_978280.1| - 9.5e-47 159.6 0.0 1.2e-46 159.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121638056|ref|YP_978280.1| - 2.6e-29 102.3 0.0 3.5e-29 101.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|121638056|ref|YP_978280.1| - 0.00031 20.7 6.6 0.012 15.5 0.1 3.0 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|121638056|ref|YP_978280.1| - 0.001 17.9 0.0 0.0017 17.2 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 gi|121638056|ref|YP_978280.1| - 0.0041 16.5 0.0 0.0086 15.4 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 gi|121638056|ref|YP_978280.1| - 0.015 14.6 0.0 0.026 13.9 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 gi|121638056|ref|YP_978280.1| - 0.085 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 RIO1 family Haspin_kinase PF12330.8 gi|121638056|ref|YP_978280.1| - 0.098 11.6 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 gi|121638056|ref|YP_978280.1| - 0.23 11.1 0.0 5.4 6.6 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Transposase_20 PF02371.16 gi|121638057|ref|YP_978281.1| - 2.5e-23 82.2 0.0 3.8e-23 81.6 0.0 1.3 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DAHP_synth_2 PF01474.16 gi|121638058|ref|YP_978282.1| - 1.4e-186 620.3 0.0 1.7e-186 620.0 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family DUF5051 PF16473.5 gi|121638059|ref|YP_978283.1| - 1.9e-19 70.2 0.0 3.3e-19 69.5 0.0 1.4 1 1 0 1 1 1 1 3' exoribonuclease, RNase T-like Acetyltransf_6 PF13480.7 gi|121638059|ref|YP_978283.1| - 0.026 14.7 0.7 0.17 12.0 0.2 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF3046 PF11248.8 gi|121638059|ref|YP_978283.1| - 0.076 13.4 0.0 0.24 11.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3046) DUF4396 PF14342.6 gi|121638060|ref|YP_978284.1| - 0.026 14.9 1.9 0.026 14.9 1.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) GT87 PF09594.10 gi|121638061|ref|YP_978285.1| - 2e-60 204.5 38.4 2e-60 204.5 38.4 3.6 3 1 1 4 4 4 2 Glycosyltransferase family 87 DUF2678 PF10856.8 gi|121638061|ref|YP_978285.1| - 0.012 15.5 0.7 1.4 8.9 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2678) Acyltransferase PF01553.21 gi|121638062|ref|YP_978286.1| - 3.8e-29 101.0 0.0 5.1e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase ArsA_ATPase PF02374.15 gi|121638064|ref|YP_978288.1| - 1.2e-25 90.3 0.0 2e-25 89.6 0.0 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase ArsA_HSP20 PF17886.1 gi|121638064|ref|YP_978288.1| - 1.2e-13 50.3 0.0 2.9e-13 49.1 0.0 1.7 1 0 0 1 1 1 1 HSP20-like domain found in ArsA Acetyltransf_6 PF13480.7 gi|121638064|ref|YP_978288.1| - 0.058 13.5 1.7 0.17 12.1 1.7 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Polyketide_cyc2 PF10604.9 gi|121638065|ref|YP_978289.1| - 4e-16 59.6 0.0 4.6e-16 59.4 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121638065|ref|YP_978289.1| - 2.1e-14 53.8 0.0 4e-14 52.9 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2505 PF10698.9 gi|121638065|ref|YP_978289.1| - 1.8e-05 24.9 0.0 4.6e-05 23.6 0.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF2505) Polyketide_cyc2 PF10604.9 gi|121638066|ref|YP_978290.1| - 0.00045 20.5 3.7 0.00063 20.0 3.7 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AMP-binding PF00501.28 gi|121638067|ref|YP_978291.1| - 1.1e-10 40.7 0.0 1.4e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding PF00501.28 gi|121638068|ref|YP_978292.1| - 3.3e-76 256.6 0.0 3.9e-76 256.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Glycos_transf_1 PF00534.20 gi|121638069|ref|YP_978293.1| - 1.3e-44 151.8 0.0 2.5e-44 150.8 0.0 1.5 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|121638069|ref|YP_978293.1| - 7.6e-30 104.1 0.1 1.4e-29 103.3 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121638069|ref|YP_978293.1| - 4.4e-13 49.6 1.8 9.1e-13 48.6 1.2 1.9 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|121638069|ref|YP_978293.1| - 1.1e-10 41.8 0.0 2.1e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Coprogen_oxidas PF01218.18 gi|121638069|ref|YP_978293.1| - 0.13 11.0 0.0 0.19 10.4 0.0 1.1 1 0 0 1 1 1 0 Coproporphyrinogen III oxidase DUF4157 PF13699.6 gi|121638070|ref|YP_978294.1| - 0.0037 17.5 0.0 0.0075 16.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) BSP PF04450.12 gi|121638070|ref|YP_978294.1| - 0.061 13.1 0.0 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 Peptidase of plants and bacteria NLPC_P60 PF00877.19 gi|121638071|ref|YP_978295.1| - 5.6e-23 81.0 0.0 1.3e-22 79.8 0.0 1.6 1 0 0 1 1 1 1 NlpC/P60 family DUF4254 PF14063.6 gi|121638071|ref|YP_978295.1| - 0.00016 21.5 4.8 0.00032 20.5 4.6 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF4254) Peptidase_C92 PF05708.12 gi|121638071|ref|YP_978295.1| - 0.0015 18.7 0.2 0.63 10.1 0.0 3.3 3 1 0 3 3 3 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Dsh_C PF12316.8 gi|121638071|ref|YP_978295.1| - 0.1 13.0 6.1 0.22 11.9 6.1 1.6 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal LRAT PF04970.13 gi|121638071|ref|YP_978295.1| - 0.15 12.4 0.5 0.51 10.7 0.0 2.0 2 0 0 2 2 2 0 Lecithin retinol acyltransferase DHR10 PF18595.1 gi|121638071|ref|YP_978295.1| - 0.17 11.9 14.0 1.8 8.6 2.5 2.4 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain APG6_N PF17675.1 gi|121638071|ref|YP_978295.1| - 3.1 8.3 13.5 4.6 7.8 2.5 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region RNase_T PF00929.24 gi|121638072|ref|YP_978296.1| - 6.7e-36 124.3 0.0 1e-35 123.8 0.0 1.3 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 gi|121638072|ref|YP_978296.1| - 1.5e-06 28.3 0.0 3.1e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like GIY-YIG PF01541.24 gi|121638072|ref|YP_978296.1| - 2.3e-05 24.6 0.0 3.8e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|121638072|ref|YP_978296.1| - 0.19 11.5 0.5 0.49 10.2 0.5 1.7 1 0 0 1 1 1 0 UvrB/uvrC motif Glycos_transf_3 PF00591.21 gi|121638073|ref|YP_978297.1| - 2e-93 312.6 1.2 2.8e-93 312.2 1.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|121638073|ref|YP_978297.1| - 6.8e-15 54.7 0.4 1.6e-14 53.5 0.4 1.7 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain COX3 PF00510.18 gi|121638074|ref|YP_978298.1| - 1e-26 94.3 12.3 1.2e-26 94.1 12.3 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Cytochrome_CBB3 PF13442.6 gi|121638075|ref|YP_978299.1| - 1.9e-19 69.8 0.0 1.5e-09 38.1 0.0 2.4 2 0 0 2 2 2 2 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 gi|121638075|ref|YP_978299.1| - 8.4e-15 55.7 3.8 3.6e-07 31.2 0.1 4.0 2 2 0 2 2 2 2 Cytochrome c Cytochrom_C550 PF14495.6 gi|121638075|ref|YP_978299.1| - 5.5e-05 22.9 0.0 0.25 11.0 0.0 2.3 2 0 0 2 2 2 2 Cytochrome c-550 domain DUF1924 PF09086.11 gi|121638075|ref|YP_978299.1| - 0.0018 18.6 0.0 3 8.3 0.1 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF1924) CCP_MauG PF03150.14 gi|121638075|ref|YP_978299.1| - 0.0023 18.6 0.0 1.8 9.2 0.0 2.2 2 0 0 2 2 2 2 Di-haem cytochrome c peroxidase Cytochrome_C7 PF14522.6 gi|121638075|ref|YP_978299.1| - 0.044 13.8 0.0 9.2 6.3 0.0 2.2 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Cytochrom_C1 PF02167.15 gi|121638075|ref|YP_978299.1| - 0.15 11.8 0.1 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Cytochrome C1 family Paired_CXXCH_1 PF09699.10 gi|121638075|ref|YP_978299.1| - 0.16 11.7 0.8 15 5.4 0.1 2.3 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) MCR PF18509.1 gi|121638075|ref|YP_978299.1| - 1.9 8.1 4.6 0.9 9.2 0.1 2.2 2 0 0 2 2 2 0 Magnetochrome domain Rieske PF00355.26 gi|121638076|ref|YP_978300.1| - 3.8e-09 36.4 0.1 7.4e-09 35.4 0.1 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain DUF4131 PF13567.6 gi|121638076|ref|YP_978300.1| - 0.096 12.3 1.9 0.13 11.9 0.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Cytochrom_B_N_2 PF13631.6 gi|121638077|ref|YP_978301.1| - 2e-60 203.7 8.5 2e-60 203.7 8.5 2.2 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|121638077|ref|YP_978301.1| - 2.7e-23 82.8 12.8 2.7e-23 82.8 12.8 2.7 3 1 0 3 3 3 1 Cytochrome b/b6/petB DUF4405 PF14358.6 gi|121638077|ref|YP_978301.1| - 0.00013 22.5 5.8 0.00013 22.5 5.8 3.4 2 2 0 2 2 2 1 Domain of unknown function (DUF4405) DUF4131 PF13567.6 gi|121638077|ref|YP_978301.1| - 1.4 8.6 14.9 5 6.7 1.4 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) DUF2561 PF10812.8 gi|121638078|ref|YP_978302.1| - 2.5e-102 341.3 14.5 2.8e-102 341.1 14.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2561) Phage_holin_3_6 PF07332.11 gi|121638078|ref|YP_978302.1| - 0.024 14.7 13.4 0.05 13.7 4.9 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Flavi_NS4A PF01350.17 gi|121638078|ref|YP_978302.1| - 0.17 11.8 2.0 0.64 10.0 0.2 2.3 2 1 0 2 2 2 0 Flavivirus non-structural protein NS4A CcmD PF04995.14 gi|121638078|ref|YP_978302.1| - 0.23 11.6 0.2 0.23 11.6 0.2 3.5 4 0 0 4 4 4 0 Heme exporter protein D (CcmD) Mycobact_memb PF05423.13 gi|121638079|ref|YP_978303.1| - 3.4e-07 30.3 0.7 7.5e-07 29.2 0.2 1.8 2 0 0 2 2 2 1 Mycobacterium membrane protein MFS_1 PF07690.16 gi|121638079|ref|YP_978303.1| - 0.036 13.0 0.0 0.046 12.7 0.0 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily Cyt_c_ox_IV PF12270.8 gi|121638080|ref|YP_978304.1| - 2.1e-50 170.3 8.0 2.4e-50 170.1 8.0 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV UNC-50 PF05216.13 gi|121638080|ref|YP_978304.1| - 0.096 12.2 0.1 0.096 12.2 0.1 1.4 2 0 0 2 2 2 0 UNC-50 family Phage_holin_3_6 PF07332.11 gi|121638080|ref|YP_978304.1| - 0.41 10.7 16.2 0.11 12.5 2.2 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III COX2 PF00116.20 gi|121638081|ref|YP_978305.1| - 6.7e-15 55.0 0.4 1.3e-13 50.9 0.0 2.3 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain ABC2_membrane_3 PF12698.7 gi|121638081|ref|YP_978305.1| - 0.046 12.8 0.4 0.073 12.2 0.4 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein COX2_TM PF02790.15 gi|121638081|ref|YP_978305.1| - 0.048 13.8 0.4 0.1 12.8 0.4 1.5 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain DUF4486 PF14858.6 gi|121638081|ref|YP_978305.1| - 0.2 10.1 0.1 0.27 9.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4486) DUF2062 PF09835.9 gi|121638081|ref|YP_978305.1| - 0.42 10.5 4.1 1.3 8.9 0.6 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2062) Asn_synthase PF00733.21 gi|121638082|ref|YP_978306.1| - 7.3e-105 351.5 0.0 9.2e-105 351.2 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|121638082|ref|YP_978306.1| - 1.9e-38 131.1 0.0 3.1e-38 130.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|121638082|ref|YP_978306.1| - 6.1e-34 117.1 0.0 1.1e-33 116.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 gi|121638082|ref|YP_978306.1| - 8e-05 22.2 0.0 0.00016 21.2 0.0 1.4 1 0 0 1 1 1 1 Aluminium induced protein QueC PF06508.13 gi|121638082|ref|YP_978306.1| - 0.013 15.1 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|121638082|ref|YP_978306.1| - 0.014 14.5 0.0 0.027 13.6 0.0 1.4 1 0 0 1 1 1 0 NAD synthase PfkB PF00294.24 gi|121638083|ref|YP_978307.1| - 5.5e-54 183.5 0.0 6.9e-54 183.2 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase PUFD PF16553.5 gi|121638084|ref|YP_978308.1| - 0.03 14.4 0.0 0.045 13.9 0.0 1.2 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain Fe-S_biosyn PF01521.20 gi|121638085|ref|YP_978309.1| - 2.5e-19 69.5 0.0 3.1e-19 69.2 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Gly_kinase PF02595.15 gi|121638086|ref|YP_978310.1| - 1.9e-93 313.4 15.7 2.8e-52 177.9 6.8 2.0 1 1 1 2 2 2 2 Glycerate kinase family DUF3043 PF11241.8 gi|121638087|ref|YP_978311.1| - 3.7e-58 196.3 15.4 7.1e-58 195.4 15.4 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3043) DBI_PRT PF02277.17 gi|121638088|ref|YP_978312.1| - 2.3e-129 431.4 20.7 2.6e-129 431.2 20.7 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase CobS PF02654.15 gi|121638089|ref|YP_978313.1| - 1.2e-43 149.7 22.5 1.4e-43 149.5 22.5 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase MFS_1 PF07690.16 gi|121638090|ref|YP_978314.1| - 0.035 13.0 55.4 0.021 13.8 23.0 3.0 1 1 1 3 3 3 0 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|121638090|ref|YP_978314.1| - 0.98 8.2 18.2 0.072 11.9 11.4 2.1 2 0 0 2 2 2 0 MFS_1 like family Aminotran_4 PF01063.19 gi|121638091|ref|YP_978315.1| - 1e-32 113.8 0.0 1.3e-32 113.5 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV GCV_T PF01571.21 gi|121638092|ref|YP_978316.1| - 9e-82 274.3 0.0 1.1e-81 274.0 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|121638092|ref|YP_978316.1| - 1.3e-15 57.1 0.1 2.8e-15 56.0 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Guanylate_cyc PF00211.20 gi|121638093|ref|YP_978317.1| - 8.1e-16 58.2 0.0 1.8e-15 57.1 0.0 1.5 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Ad_Cy_reg PF16701.5 gi|121638093|ref|YP_978317.1| - 5.1e-09 36.1 0.7 8.2e-09 35.5 0.7 1.3 1 0 0 1 1 1 1 Adenylate cyclase regulatory domain Peptidase_M17 PF00883.21 gi|121638094|ref|YP_978318.1| - 8.8e-115 383.3 0.1 1.1e-114 382.9 0.1 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 gi|121638094|ref|YP_978318.1| - 5.8e-28 97.3 0.3 7.4e-27 93.7 0.0 2.5 2 0 0 2 2 2 1 Cytosol aminopeptidase family, N-terminal domain adh_short PF00106.25 gi|121638095|ref|YP_978319.1| - 2.2e-49 167.6 1.1 3.1e-49 167.1 1.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638095|ref|YP_978319.1| - 4e-42 144.4 1.7 5.9e-42 143.8 1.7 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Abhydrolase_1 PF00561.20 gi|121638095|ref|YP_978319.1| - 3e-36 125.4 0.1 4.2e-36 124.9 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121638095|ref|YP_978319.1| - 8.9e-13 49.4 11.7 2.1e-12 48.1 11.7 1.6 1 0 0 1 1 1 1 Alpha/beta hydrolase family KR PF08659.10 gi|121638095|ref|YP_978319.1| - 3.7e-09 36.7 0.4 6.3e-09 36.0 0.4 1.3 1 0 0 1 1 1 1 KR domain Hydrolase_4 PF12146.8 gi|121638095|ref|YP_978319.1| - 7.3e-09 35.2 0.1 1.5e-08 34.2 0.1 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Epimerase PF01370.21 gi|121638095|ref|YP_978319.1| - 0.0014 18.2 0.1 0.0022 17.5 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 gi|121638095|ref|YP_978319.1| - 0.0046 16.9 0.4 0.0074 16.2 0.4 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|121638095|ref|YP_978319.1| - 0.044 13.3 0.1 0.074 12.6 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Polysacc_synt_2 PF02719.15 gi|121638095|ref|YP_978319.1| - 0.2 10.7 0.0 0.29 10.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-oxoacid_dh PF00198.23 gi|121638096|ref|YP_978320.1| - 3.2e-71 239.5 0.0 4.9e-71 238.9 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|121638096|ref|YP_978320.1| - 3.1e-42 142.3 11.8 1.1e-21 76.4 1.4 2.7 3 0 0 3 3 3 2 Biotin-requiring enzyme E3_binding PF02817.17 gi|121638096|ref|YP_978320.1| - 4.3e-15 55.8 0.2 1.2e-14 54.3 0.2 1.9 1 0 0 1 1 1 1 e3 binding domain GCV_H PF01597.19 gi|121638096|ref|YP_978320.1| - 0.0024 17.7 5.9 1 9.2 0.1 3.8 3 1 1 4 4 4 2 Glycine cleavage H-protein PTS_EIIA_1 PF00358.20 gi|121638096|ref|YP_978320.1| - 0.0059 16.4 0.1 3.7 7.3 0.0 2.7 2 1 0 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PYNP_C PF07831.13 gi|121638096|ref|YP_978320.1| - 0.042 13.5 3.0 0.9 9.2 0.0 3.5 3 2 1 4 4 4 0 Pyrimidine nucleoside phosphorylase C-terminal domain HlyD_3 PF13437.6 gi|121638096|ref|YP_978320.1| - 0.064 14.0 12.1 5.8 7.7 0.2 4.7 3 2 2 5 5 5 0 HlyD family secretion protein DUF2254 PF10011.9 gi|121638096|ref|YP_978320.1| - 0.14 10.9 0.0 0.47 9.2 0.0 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2254) DUF1731 PF08338.11 gi|121638097|ref|YP_978321.1| - 3.1e-14 52.5 0.1 7e-14 51.4 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) Epimerase PF01370.21 gi|121638097|ref|YP_978321.1| - 1.8e-10 40.7 0.0 3.5e-10 39.7 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121638097|ref|YP_978321.1| - 6.4e-05 22.9 0.4 0.00012 22.0 0.4 1.5 1 0 0 1 1 1 1 NAD(P)H-binding Rossmann-like PF10727.9 gi|121638097|ref|YP_978321.1| - 0.018 14.9 1.0 0.38 10.6 0.3 2.5 2 0 0 2 2 2 0 Rossmann-like domain GDP_Man_Dehyd PF16363.5 gi|121638097|ref|YP_978321.1| - 0.063 12.7 0.0 1 8.7 0.0 2.6 2 1 0 2 2 2 0 GDP-mannose 4,6 dehydratase BPL_LplA_LipB PF03099.19 gi|121638098|ref|YP_978322.1| - 2.9e-07 30.4 0.0 5.8e-07 29.5 0.0 1.5 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Gp_dh_C PF02800.20 gi|121638098|ref|YP_978322.1| - 0.032 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Radical_SAM PF04055.21 gi|121638099|ref|YP_978323.1| - 1.8e-12 48.0 0.0 3.6e-12 47.0 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 gi|121638099|ref|YP_978323.1| - 7.1e-09 36.1 0.2 1.2e-08 35.3 0.2 1.4 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family DUF4191 PF13829.6 gi|121638100|ref|YP_978324.1| - 6.2e-83 277.4 2.1 7.5e-83 277.2 2.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4191) DUF2207 PF09972.9 gi|121638100|ref|YP_978324.1| - 0.0081 15.0 0.2 0.01 14.7 0.2 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) RDD PF06271.12 gi|121638101|ref|YP_978325.1| - 6.3e-09 36.2 13.5 3.3e-08 33.9 13.5 1.9 1 1 0 1 1 1 1 RDD family Gln-synt_C PF00120.24 gi|121638102|ref|YP_978326.1| - 6.1e-134 446.4 0.0 7.1e-134 446.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|121638102|ref|YP_978326.1| - 5e-28 96.6 0.1 1.2e-27 95.5 0.1 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain GlnE PF03710.15 gi|121638103|ref|YP_978327.1| - 1e-106 356.0 7.6 5.2e-72 242.3 0.1 3.4 3 1 0 3 3 3 2 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 gi|121638103|ref|YP_978327.1| - 1.3e-57 194.1 5.5 1.1e-33 116.4 2.6 2.5 2 0 0 2 2 2 2 GlnD PII-uridylyltransferase DUF294 PF03445.13 gi|121638103|ref|YP_978327.1| - 9.4e-06 25.5 0.0 0.2 11.4 0.0 2.6 2 0 0 2 2 2 2 Putative nucleotidyltransferase DUF294 DUF294_C PF10335.9 gi|121638103|ref|YP_978327.1| - 0.00035 20.4 1.3 0.0066 16.2 0.2 2.6 2 0 0 2 2 2 1 Putative nucleotidyltransferase substrate binding domain Gln-synt_C PF00120.24 gi|121638104|ref|YP_978328.1| - 1.6e-126 422.0 0.0 1.9e-126 421.7 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|121638104|ref|YP_978328.1| - 7.9e-27 92.8 0.0 3.4e-26 90.8 0.0 2.0 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|121638104|ref|YP_978328.1| - 0.0084 15.9 0.0 0.054 13.3 0.0 2.1 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Abhydrolase_1 PF00561.20 gi|121638105|ref|YP_978329.1| - 1.9e-72 244.0 0.4 1.3e-64 218.4 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 gi|121638105|ref|YP_978329.1| - 6.1e-22 77.7 0.0 6e-21 74.5 0.1 2.6 2 0 0 2 2 2 1 TAP-like protein Ser_hydrolase PF06821.13 gi|121638105|ref|YP_978329.1| - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase Abhydrolase_1 PF00561.20 gi|121638106|ref|YP_978330.1| - 8.1e-91 304.2 0.0 1.1e-90 303.7 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 gi|121638106|ref|YP_978330.1| - 8.3e-22 77.3 0.1 2.6e-21 75.7 0.0 1.9 2 0 0 2 2 2 1 TAP-like protein Hydrolase_4 PF12146.8 gi|121638106|ref|YP_978330.1| - 0.0055 16.0 0.0 0.29 10.4 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Pantoate_transf PF02548.15 gi|121638107|ref|YP_978331.1| - 5.1e-106 353.8 1.1 5.9e-106 353.6 1.1 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|121638107|ref|YP_978331.1| - 0.00011 21.8 4.2 0.00021 20.8 4.2 1.7 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase CHAD PF05235.14 gi|121638108|ref|YP_978332.1| - 8.1e-45 153.5 22.4 8.1e-45 153.5 22.4 2.2 2 0 0 2 2 2 1 CHAD domain CYTH PF01928.21 gi|121638108|ref|YP_978332.1| - 2.2e-13 50.5 0.0 4.5e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 CYTH domain Oxygenase-NA PF09859.9 gi|121638110|ref|YP_978334.1| - 3e-58 196.1 0.0 3.3e-58 196.0 0.0 1.0 1 0 0 1 1 1 1 Oxygenase, catalysing oxidative methylation of damaged DNA 2OG-FeII_Oxy_3 PF13640.6 gi|121638110|ref|YP_978334.1| - 0.0068 17.3 0.0 0.009 16.9 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily His_Phos_1 PF00300.22 gi|121638111|ref|YP_978335.1| - 4.1e-54 183.2 0.9 4.6e-54 183.1 0.2 1.4 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) RVT_3 PF13456.6 gi|121638111|ref|YP_978335.1| - 2.2e-24 85.6 0.3 4.2e-24 84.7 0.0 1.7 2 0 0 2 2 2 1 Reverse transcriptase-like RNase_H PF00075.24 gi|121638111|ref|YP_978335.1| - 1.2e-09 38.5 0.1 3.2e-09 37.1 0.0 1.7 2 0 0 2 2 2 1 RNase H zf-RING_7 PF02591.15 gi|121638112|ref|YP_978336.1| - 4e-11 42.9 2.8 1.4e-10 41.2 2.8 2.0 1 0 0 1 1 1 1 C4-type zinc ribbon domain ATG16 PF08614.11 gi|121638112|ref|YP_978336.1| - 5.7e-05 23.4 22.5 8.9e-05 22.8 22.5 1.4 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) SYCE1 PF15233.6 gi|121638112|ref|YP_978336.1| - 0.0028 17.7 4.9 0.0067 16.5 4.9 1.5 1 0 0 1 1 1 1 Synaptonemal complex central element protein 1 CorA PF01544.18 gi|121638112|ref|YP_978336.1| - 0.043 13.1 12.2 0.062 12.6 12.2 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein MscS_porin PF12795.7 gi|121638112|ref|YP_978336.1| - 0.058 12.9 29.5 0.028 14.0 26.5 1.8 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain DNA_RNApol_7kD PF03604.13 gi|121638112|ref|YP_978336.1| - 0.088 12.5 0.8 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|121638112|ref|YP_978336.1| - 0.1 12.7 0.5 0.26 11.4 0.5 1.7 1 0 0 1 1 1 0 Zinc ribbon domain Prok-RING_1 PF14446.6 gi|121638112|ref|YP_978336.1| - 0.12 12.3 1.8 0.24 11.4 1.8 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|121638112|ref|YP_978336.1| - 0.13 11.7 0.1 0.13 11.7 0.1 1.6 2 0 0 2 2 1 0 zinc-ribbon domain CENP-K PF11802.8 gi|121638112|ref|YP_978336.1| - 0.16 11.5 6.2 0.26 10.8 6.1 1.3 1 1 0 1 1 1 0 Centromere-associated protein K GAS PF13851.6 gi|121638112|ref|YP_978336.1| - 0.17 11.2 16.7 0.29 10.5 0.3 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding EzrA PF06160.12 gi|121638112|ref|YP_978336.1| - 0.19 9.9 8.6 0.27 9.4 8.6 1.2 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA APG6_N PF17675.1 gi|121638112|ref|YP_978336.1| - 0.2 12.2 24.6 1.3 9.5 0.5 2.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Scaffolding_pro PF11418.8 gi|121638112|ref|YP_978336.1| - 0.23 12.0 2.0 1 10.0 0.1 2.6 1 1 2 3 3 2 0 Phi29 scaffolding protein COG2 PF06148.11 gi|121638112|ref|YP_978336.1| - 0.25 11.5 7.1 5.5 7.1 0.1 2.5 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fib_alpha PF08702.10 gi|121638112|ref|YP_978336.1| - 0.33 11.1 6.1 1.9 8.6 2.8 2.1 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family TPR_MLP1_2 PF07926.12 gi|121638112|ref|YP_978336.1| - 0.34 11.0 25.1 4.8 7.2 8.0 3.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 gi|121638112|ref|YP_978336.1| - 0.43 9.9 21.4 7.4 5.8 21.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 gi|121638112|ref|YP_978336.1| - 0.44 10.3 21.7 0.33 10.7 0.6 3.6 1 1 1 3 3 3 0 Septum formation initiator RasGAP_C PF03836.15 gi|121638112|ref|YP_978336.1| - 0.56 10.4 5.2 4.4 7.4 0.2 2.4 1 1 1 2 2 2 0 RasGAP C-terminus Spc7 PF08317.11 gi|121638112|ref|YP_978336.1| - 0.62 8.9 19.1 2.1 7.2 12.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 gi|121638112|ref|YP_978336.1| - 0.8 7.5 4.4 0.97 7.3 4.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZapB PF06005.12 gi|121638112|ref|YP_978336.1| - 0.92 10.0 22.3 13 6.3 12.7 3.3 2 1 1 3 3 3 0 Cell division protein ZapB Seryl_tRNA_N PF02403.22 gi|121638112|ref|YP_978336.1| - 0.99 9.7 12.7 2.4 8.4 7.8 2.6 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain AAA_13 PF13166.6 gi|121638112|ref|YP_978336.1| - 1 7.9 8.2 1.4 7.4 7.4 1.3 1 1 0 1 1 1 0 AAA domain DivIVA PF05103.13 gi|121638112|ref|YP_978336.1| - 1.2 9.2 18.9 3.8 7.6 2.4 2.1 2 0 0 2 2 2 0 DivIVA protein TMF_TATA_bd PF12325.8 gi|121638112|ref|YP_978336.1| - 1.3 9.3 15.2 1.6 9.0 3.7 3.2 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding GrpE PF01025.19 gi|121638112|ref|YP_978336.1| - 1.4 8.6 14.0 1.9 8.1 2.0 2.6 1 1 1 2 2 2 0 GrpE DUF2730 PF10805.8 gi|121638112|ref|YP_978336.1| - 1.7 8.8 5.0 5.2 7.2 0.1 3.0 2 2 0 2 2 2 0 Protein of unknown function (DUF2730) Baculo_PEP_C PF04513.12 gi|121638112|ref|YP_978336.1| - 1.8 8.6 7.5 1.1 9.3 4.3 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4201 PF13870.6 gi|121638112|ref|YP_978336.1| - 2.4 7.8 13.4 18 5.0 7.9 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) UPF0242 PF06785.11 gi|121638112|ref|YP_978336.1| - 2.9 8.0 16.5 0.86 9.7 13.0 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Fez1 PF06818.15 gi|121638112|ref|YP_978336.1| - 3.8 7.9 13.7 9.9 6.6 13.8 1.7 1 1 0 1 1 1 0 Fez1 DUF3584 PF12128.8 gi|121638112|ref|YP_978336.1| - 3.9 4.9 22.1 9.5 3.6 22.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) FapA PF03961.13 gi|121638112|ref|YP_978336.1| - 4.2 5.9 6.7 16 3.9 6.7 1.8 1 1 0 1 1 1 0 Flagellar Assembly Protein A HSCB_C PF07743.13 gi|121638112|ref|YP_978336.1| - 4.4 7.9 17.7 0.23 12.0 8.6 3.1 1 1 2 3 3 3 0 HSCB C-terminal oligomerisation domain Apt1 PF10351.9 gi|121638112|ref|YP_978336.1| - 4.7 6.0 6.1 7 5.4 6.1 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain TMPIT PF07851.13 gi|121638112|ref|YP_978336.1| - 4.8 6.3 6.1 3.7 6.7 3.8 1.7 1 1 1 2 2 2 0 TMPIT-like protein Atg14 PF10186.9 gi|121638112|ref|YP_978336.1| - 4.9 6.1 15.0 1.8 7.5 11.5 1.8 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mod_r PF07200.13 gi|121638112|ref|YP_978336.1| - 6.1 6.9 18.1 2.6 8.1 11.4 2.1 1 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF724 PF05266.14 gi|121638112|ref|YP_978336.1| - 6.2 6.6 10.2 13 5.6 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) ADIP PF11559.8 gi|121638112|ref|YP_978336.1| - 6.8 6.8 18.4 7.8 6.6 0.8 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding ISG65-75 PF11727.8 gi|121638112|ref|YP_978336.1| - 8 5.6 8.4 2.1 7.5 4.2 1.8 1 1 0 2 2 2 0 Invariant surface glycoprotein Spc24 PF08286.11 gi|121638112|ref|YP_978336.1| - 8.2 6.7 14.9 44 4.4 10.2 3.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 NIF3 PF01784.18 gi|121638113|ref|YP_978337.1| - 9.3e-60 202.3 0.0 1.3e-59 201.9 0.0 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) Aminotran_1_2 PF00155.21 gi|121638114|ref|YP_978338.1| - 2.3e-23 83.0 0.0 3e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II HAD_2 PF13419.6 gi|121638115|ref|YP_978339.1| - 2.3e-31 109.3 0.0 2.9e-31 108.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121638115|ref|YP_978339.1| - 2.3e-16 60.8 0.3 2.9e-15 57.1 0.3 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121638115|ref|YP_978339.1| - 7.8e-12 46.0 0.2 1.3e-11 45.2 0.2 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121638115|ref|YP_978339.1| - 2.6e-08 33.8 0.6 5.7e-08 32.7 0.6 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Acid_PPase PF12689.7 gi|121638115|ref|YP_978339.1| - 0.001 19.0 0.0 0.023 14.6 0.0 2.1 1 1 0 1 1 1 1 Acid Phosphatase Hydrolase_3 PF08282.12 gi|121638115|ref|YP_978339.1| - 0.0062 16.3 0.0 1.5 8.5 0.0 2.3 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase LMWPc PF01451.21 gi|121638116|ref|YP_978340.1| - 1.9e-46 158.0 0.0 2.2e-46 157.8 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase SURF1 PF02104.15 gi|121638117|ref|YP_978341.1| - 1.6e-24 87.1 0.0 2.2e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 SURF1 family DUF4381 PF14316.6 gi|121638117|ref|YP_978341.1| - 0.088 13.0 1.2 6.1 7.1 1.0 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4381) CobD_Cbib PF03186.13 gi|121638118|ref|YP_978342.1| - 6.8e-88 294.5 1.3 8e-88 294.2 1.3 1.0 1 0 0 1 1 1 1 CobD/Cbib protein DUF2236 PF09995.9 gi|121638119|ref|YP_978343.1| - 8.8e-43 147.1 5.0 1.1e-42 146.8 5.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2236) AhpC-TSA PF00578.21 gi|121638120|ref|YP_978344.1| - 8.6e-33 112.9 0.0 9.9e-33 112.7 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121638120|ref|YP_978344.1| - 2.8e-18 66.1 0.0 3.3e-18 65.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF3052 PF11253.8 gi|121638121|ref|YP_978345.1| - 1.6e-55 186.3 3.0 1.9e-55 186.1 3.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3052) PDH_E1_M PF17831.1 gi|121638123|ref|YP_978347.1| - 7.6e-111 369.2 0.1 1.2e-110 368.5 0.1 1.3 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_N PF00456.21 gi|121638123|ref|YP_978347.1| - 4e-14 52.3 0.0 4.4e-10 39.0 0.0 2.3 2 0 0 2 2 2 2 Transketolase, thiamine diphosphate binding domain Transketolase_C PF02780.20 gi|121638123|ref|YP_978347.1| - 0.0096 15.8 0.4 0.029 14.2 0.1 1.9 2 0 0 2 2 2 1 Transketolase, C-terminal domain HTH_30 PF13556.6 gi|121638124|ref|YP_978348.1| - 1.4e-21 76.1 0.0 3.9e-21 74.6 0.0 1.9 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 gi|121638124|ref|YP_978348.1| - 1.1e-15 57.9 0.5 6.5e-15 55.4 0.1 2.3 2 0 0 2 2 2 1 GGDEF-like domain HTH_8 PF02954.19 gi|121638124|ref|YP_978348.1| - 0.1 12.4 0.0 0.52 10.1 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family Acyl_transf_1 PF00698.21 gi|121638125|ref|YP_978349.1| - 2.7e-22 79.7 3.8 3.5e-22 79.3 3.8 1.0 1 0 0 1 1 1 1 Acyl transferase domain Attacin_N PF03768.15 gi|121638125|ref|YP_978349.1| - 4.8 7.4 9.3 17 5.6 0.9 3.4 3 1 0 3 3 3 0 Attacin, N-terminal region PP-binding PF00550.25 gi|121638126|ref|YP_978350.1| - 3.4e-17 62.6 0.1 5.4e-17 61.9 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site Ribosomal_L50 PF10501.9 gi|121638126|ref|YP_978350.1| - 0.00036 20.6 0.0 0.00044 20.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal subunit 39S HalOD1 PF18545.1 gi|121638126|ref|YP_978350.1| - 0.052 13.8 1.8 0.49 10.7 0.2 2.1 2 0 0 2 2 2 0 Halobacterial output domain 1 Herpes_US12 PF05363.12 gi|121638126|ref|YP_978350.1| - 0.11 13.3 0.0 0.15 12.8 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus US12 family ketoacyl-synt PF00109.26 gi|121638127|ref|YP_978351.1| - 2.2e-49 168.4 1.4 2.2e-49 168.4 1.4 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|121638127|ref|YP_978351.1| - 1.7e-30 105.5 0.6 3.1e-30 104.6 0.6 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 gi|121638127|ref|YP_978351.1| - 4.8e-07 29.4 1.5 7.4e-07 28.8 0.6 1.7 2 0 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|121638128|ref|YP_978352.1| - 1.1e-54 185.7 0.9 1.3e-54 185.4 0.3 1.5 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|121638128|ref|YP_978352.1| - 3.1e-33 114.3 0.4 5.6e-33 113.5 0.4 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 gi|121638128|ref|YP_978352.1| - 2e-08 33.9 1.2 9.1e-08 31.8 0.7 1.9 2 0 0 2 2 2 1 Thiolase, N-terminal domain Carboxyl_trans PF01039.22 gi|121638129|ref|YP_978353.1| - 1.7e-124 416.2 0.3 2.2e-124 415.8 0.3 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|121638129|ref|YP_978353.1| - 2.3e-06 27.3 6.8 3.9e-05 23.2 0.2 2.4 2 0 0 2 2 2 2 Malonate decarboxylase gamma subunit (MdcE) MTES_1575 PF18741.1 gi|121638131|ref|YP_978355.1| - 3.8e-05 23.8 0.0 8.7e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 REase_MTES_1575 DUF559 PF04480.12 gi|121638131|ref|YP_978355.1| - 0.025 14.4 0.0 0.052 13.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF559) DAO PF01266.24 gi|121638132|ref|YP_978356.1| - 1.1e-48 166.7 4.6 1.3e-48 166.4 4.6 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 gi|121638132|ref|YP_978356.1| - 3.8e-14 52.6 1.1 6.8e-14 51.8 0.0 2.0 3 0 0 3 3 3 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_2 PF00890.24 gi|121638132|ref|YP_978356.1| - 1.8e-06 27.3 8.3 3.4e-05 23.1 8.3 2.3 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|121638132|ref|YP_978356.1| - 5.5e-05 22.7 0.8 0.00011 21.8 0.8 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121638132|ref|YP_978356.1| - 0.00068 19.0 2.1 0.0011 18.2 0.6 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121638132|ref|YP_978356.1| - 0.0015 17.7 0.4 0.0022 17.1 0.4 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|121638132|ref|YP_978356.1| - 0.0023 17.0 0.3 0.071 12.1 0.3 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 gi|121638132|ref|YP_978356.1| - 0.013 14.7 1.1 0.023 13.9 1.1 1.3 1 0 0 1 1 1 0 Thi4 family 3HCDH_N PF02737.18 gi|121638132|ref|YP_978356.1| - 0.014 15.3 0.3 0.026 14.4 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|121638132|ref|YP_978356.1| - 0.017 13.9 0.9 0.024 13.4 0.9 1.2 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_3 PF13738.6 gi|121638132|ref|YP_978356.1| - 0.053 12.8 0.1 0.092 12.0 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121638132|ref|YP_978356.1| - 0.064 13.8 0.5 0.25 11.9 0.5 2.0 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|121638132|ref|YP_978356.1| - 0.071 13.3 4.9 0.051 13.8 1.5 2.6 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|121638132|ref|YP_978356.1| - 0.076 12.2 1.1 0.18 11.0 1.1 1.6 1 0 0 1 1 1 0 FAD binding domain TetR_N PF00440.23 gi|121638133|ref|YP_978357.1| - 1.2e-12 47.4 0.0 4.5e-12 45.6 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_AsnC-type PF13404.6 gi|121638133|ref|YP_978357.1| - 0.00011 21.9 0.8 0.00037 20.3 0.4 2.1 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 gi|121638133|ref|YP_978357.1| - 0.00013 21.7 0.3 0.00037 20.2 0.3 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|121638133|ref|YP_978357.1| - 0.00017 21.3 0.0 0.0005 19.8 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_7 PF02796.15 gi|121638133|ref|YP_978357.1| - 0.0011 19.0 0.1 0.0029 17.6 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 gi|121638133|ref|YP_978357.1| - 0.0018 18.3 0.3 0.0055 16.8 0.3 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain LacI PF00356.21 gi|121638133|ref|YP_978357.1| - 0.0028 17.4 0.0 0.0091 15.8 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family TetR_C_15 PF17918.1 gi|121638133|ref|YP_978357.1| - 0.0092 16.7 3.7 0.013 16.3 2.2 1.9 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_29 PF13551.6 gi|121638133|ref|YP_978357.1| - 0.0097 15.9 0.2 0.029 14.4 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_1_2 PF13022.6 gi|121638133|ref|YP_978357.1| - 0.0098 16.0 0.0 0.02 15.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase HTH_24 PF13412.6 gi|121638133|ref|YP_978357.1| - 0.01 15.4 0.0 0.03 13.9 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 gi|121638133|ref|YP_978357.1| - 0.016 14.7 0.0 0.046 13.2 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|121638133|ref|YP_978357.1| - 0.02 14.7 1.4 0.14 12.1 0.1 2.7 2 1 0 2 2 2 0 MarR family HTH_11 PF08279.12 gi|121638133|ref|YP_978357.1| - 0.021 14.8 0.3 0.069 13.1 0.1 1.9 2 0 0 2 2 2 0 HTH domain HTH_38 PF13936.6 gi|121638133|ref|YP_978357.1| - 0.03 14.1 0.2 0.09 12.6 0.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_22 PF13309.6 gi|121638133|ref|YP_978357.1| - 0.033 14.2 0.1 0.21 11.7 0.0 2.3 3 0 0 3 3 3 0 HTH domain HTH_Crp_2 PF13545.6 gi|121638133|ref|YP_978357.1| - 0.056 13.4 1.6 0.65 10.0 0.0 3.0 2 2 1 3 3 3 0 Crp-like helix-turn-helix domain HTH_31 PF13560.6 gi|121638133|ref|YP_978357.1| - 0.072 13.4 2.5 0.077 13.4 0.4 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 gi|121638133|ref|YP_978357.1| - 0.073 13.3 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|121638133|ref|YP_978357.1| - 0.16 11.8 0.1 0.36 10.7 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB BSP PF04450.12 gi|121638133|ref|YP_978357.1| - 0.17 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Peptidase of plants and bacteria FAD-oxidase_C PF02913.19 gi|121638134|ref|YP_978358.1| - 3.3e-45 154.7 0.0 4.5e-45 154.2 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|121638134|ref|YP_978358.1| - 7.9e-32 109.9 0.1 1.2e-30 106.1 0.0 2.4 2 0 0 2 2 2 1 FAD binding domain DAGK_cat PF00781.24 gi|121638135|ref|YP_978359.1| - 1e-27 96.2 1.6 1e-27 96.2 1.6 1.6 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain Peripla_BP_6 PF13458.6 gi|121638135|ref|YP_978359.1| - 0.019 14.7 0.5 0.024 14.3 0.5 1.1 1 0 0 1 1 1 0 Periplasmic binding protein NAD_kinase PF01513.21 gi|121638135|ref|YP_978359.1| - 0.026 13.7 4.1 0.068 12.4 4.1 1.7 1 1 0 1 1 1 0 ATP-NAD kinase MVL PF12151.8 gi|121638136|ref|YP_978360.1| - 0.2 11.6 0.2 0.2 11.6 0.2 2.1 2 0 0 2 2 2 0 Mannan-binding protein LysE PF01810.18 gi|121638137|ref|YP_978361.1| - 9.5e-08 31.7 6.6 1.1e-07 31.5 6.6 1.0 1 0 0 1 1 1 1 LysE type translocator MerR-DNA-bind PF09278.11 gi|121638138|ref|YP_978362.1| - 0.096 13.2 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 MerR, DNA binding DUF3145 PF11343.8 gi|121638139|ref|YP_978363.1| - 4.9e-69 230.9 0.4 5.8e-69 230.6 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3145) Beta-lactamase PF00144.24 gi|121638140|ref|YP_978364.1| - 2.5e-34 119.0 4.2 5.1e-34 118.0 4.2 1.4 1 1 0 1 1 1 1 Beta-lactamase Beta-lactamase2 PF13354.6 gi|121638140|ref|YP_978364.1| - 0.072 12.7 0.0 1 8.9 0.0 2.1 2 0 0 2 2 2 0 Beta-lactamase enzyme family Methyltransf_31 PF13847.6 gi|121638141|ref|YP_978365.1| - 3.7e-26 91.8 0.0 6.1e-26 91.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121638141|ref|YP_978365.1| - 7.2e-18 65.1 0.4 1.5e-17 64.1 0.1 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638141|ref|YP_978365.1| - 5e-17 62.5 0.0 8.3e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638141|ref|YP_978365.1| - 1.5e-16 60.6 0.0 2.3e-16 60.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638141|ref|YP_978365.1| - 2.2e-15 57.1 0.1 5.5e-15 55.8 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121638141|ref|YP_978365.1| - 1.4e-08 34.3 0.0 3.8e-08 33.0 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|121638141|ref|YP_978365.1| - 1.3e-07 31.3 0.0 2.2e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|121638141|ref|YP_978365.1| - 6.7e-06 25.5 0.1 1.2e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 gi|121638141|ref|YP_978365.1| - 8.2e-06 25.7 0.0 1.2e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|121638141|ref|YP_978365.1| - 8.4e-06 25.3 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|121638141|ref|YP_978365.1| - 1.1e-05 25.0 0.0 1.7e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_24 PF13578.6 gi|121638141|ref|YP_978365.1| - 0.00037 21.5 0.1 0.0012 19.9 0.1 1.9 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|121638141|ref|YP_978365.1| - 0.00039 19.9 0.0 0.0021 17.5 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase MetW PF07021.12 gi|121638141|ref|YP_978365.1| - 0.0031 17.1 0.0 0.005 16.5 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 gi|121638141|ref|YP_978365.1| - 0.0061 16.6 0.0 0.009 16.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 gi|121638141|ref|YP_978365.1| - 0.0078 16.2 0.2 0.016 15.2 0.2 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TehB PF03848.14 gi|121638141|ref|YP_978365.1| - 0.0084 15.5 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_9 PF08003.11 gi|121638141|ref|YP_978365.1| - 0.0095 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Zn_peptidase_2 PF04298.12 gi|121638141|ref|YP_978365.1| - 0.041 13.3 0.0 0.072 12.5 0.0 1.4 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Methyltransf_20 PF12147.8 gi|121638141|ref|YP_978365.1| - 0.066 12.4 0.0 0.13 11.4 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase DREV PF05219.12 gi|121638141|ref|YP_978365.1| - 0.1 11.6 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase DRE2_N PF16803.5 gi|121638141|ref|YP_978365.1| - 0.21 11.9 0.0 0.36 11.1 0.0 1.3 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus ADH_N PF08240.12 gi|121638142|ref|YP_978366.1| - 7.7e-27 93.3 0.9 1.5e-26 92.4 0.9 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121638142|ref|YP_978366.1| - 2.2e-26 92.3 0.1 4.1e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121638142|ref|YP_978366.1| - 5e-09 37.3 0.0 9.9e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|121638142|ref|YP_978366.1| - 1.1e-06 28.2 0.6 6.7e-05 22.5 1.1 2.2 2 0 0 2 2 2 1 Glucose dehydrogenase C-terminus ThiF PF00899.21 gi|121638142|ref|YP_978366.1| - 0.005 16.2 0.7 0.01 15.2 0.7 1.4 1 0 0 1 1 1 1 ThiF family AlaDh_PNT_C PF01262.21 gi|121638142|ref|YP_978366.1| - 0.0098 15.2 3.9 0.016 14.5 3.9 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|121638142|ref|YP_978366.1| - 0.07 13.4 0.4 0.13 12.6 0.4 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|121638142|ref|YP_978366.1| - 0.14 12.7 0.6 0.49 11.0 0.6 2.1 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|121638142|ref|YP_978366.1| - 0.15 11.4 0.3 0.27 10.6 0.3 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|121638142|ref|YP_978366.1| - 0.16 11.5 1.5 0.26 10.8 0.7 1.7 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PrmA PF06325.13 gi|121638142|ref|YP_978366.1| - 0.16 11.3 4.0 0.22 10.9 4.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Lactamase_B PF00753.27 gi|121638143|ref|YP_978367.1| - 2.4e-19 70.1 11.3 3.6e-19 69.5 11.3 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121638143|ref|YP_978367.1| - 0.001 18.6 1.5 0.0035 16.9 1.5 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|121638143|ref|YP_978367.1| - 0.0041 17.0 0.3 0.02 14.8 0.1 2.2 2 1 1 3 3 3 1 Beta-lactamase superfamily domain PQQ_3 PF13570.6 gi|121638143|ref|YP_978367.1| - 1.7 9.2 9.9 6.7 7.3 1.6 4.0 4 1 0 4 4 4 0 PQQ-like domain CN_hydrolase PF00795.22 gi|121638144|ref|YP_978368.1| - 1.8e-17 63.6 0.4 3.7e-17 62.5 0.1 1.6 2 0 0 2 2 2 1 Carbon-nitrogen hydrolase adh_short PF00106.25 gi|121638145|ref|YP_978369.1| - 7.8e-32 110.3 0.0 5.2e-31 107.6 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638145|ref|YP_978369.1| - 1.8e-21 76.8 0.2 6.7e-21 74.9 0.2 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121638145|ref|YP_978369.1| - 1e-06 28.8 0.3 1.5e-06 28.2 0.3 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121638145|ref|YP_978369.1| - 8.4e-06 25.4 0.0 1.3e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family HSP70 PF00012.20 gi|121638146|ref|YP_978370.1| - 9e-18 63.8 0.0 1.2e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|121638146|ref|YP_978370.1| - 0.00054 18.9 0.0 0.00097 18.0 0.0 1.3 1 1 0 1 1 1 1 MreB/Mbl protein Gp58 PF07902.11 gi|121638146|ref|YP_978370.1| - 0.13 10.5 0.0 0.19 10.0 0.0 1.1 1 0 0 1 1 1 0 gp58-like protein MFS_1 PF07690.16 gi|121638147|ref|YP_978371.1| - 5.1e-16 58.5 53.1 1.9e-08 33.6 26.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily p450 PF00067.22 gi|121638148|ref|YP_978372.1| - 2.4e-22 79.3 0.0 2.6e-12 46.3 0.0 3.1 2 1 0 2 2 2 2 Cytochrome P450 Sulfotransfer_3 PF13469.6 gi|121638149|ref|YP_978373.1| - 5e-41 141.5 0.2 8.4e-41 140.7 0.2 1.4 1 0 0 1 1 1 1 Sulfotransferase family Sulfotransfer_1 PF00685.27 gi|121638149|ref|YP_978373.1| - 1.1e-13 51.4 0.0 3.6e-13 49.6 0.0 1.8 2 1 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_4 PF17784.1 gi|121638149|ref|YP_978373.1| - 0.025 14.4 1.4 0.16 11.7 0.0 2.6 3 0 0 3 3 3 0 Sulfotransferase domain p450 PF00067.22 gi|121638150|ref|YP_978374.1| - 2.4e-23 82.6 0.0 6.9e-17 61.3 0.0 3.1 2 1 1 3 3 3 3 Cytochrome P450 LPAM_1 PF08139.12 gi|121638152|ref|YP_978376.1| - 0.024 15.1 0.2 0.059 13.9 0.2 1.7 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Septum_form PF13845.6 gi|121638152|ref|YP_978376.1| - 0.043 13.3 0.0 0.19 11.2 0.0 1.9 1 1 0 1 1 1 0 Septum formation DUF2695 PF10905.8 gi|121638153|ref|YP_978377.1| - 1.2e-24 86.3 1.0 1.9e-24 85.6 0.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2695) DUF2397 PF09660.10 gi|121638153|ref|YP_978377.1| - 0.0069 15.3 2.4 0.0088 15.0 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) Ret2_MD PF18528.1 gi|121638153|ref|YP_978377.1| - 0.04 14.3 0.0 0.05 14.0 0.0 1.2 1 0 0 1 1 1 0 RNA editing 3' terminal uridylyl transferase 2 middle domain DUF202 PF02656.15 gi|121638154|ref|YP_978378.1| - 9.4e-18 64.4 8.8 3.1e-17 62.8 5.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) zf-HC3 PF16827.5 gi|121638154|ref|YP_978378.1| - 0.049 13.8 0.1 0.08 13.2 0.1 1.3 1 0 0 1 1 1 0 zinc-finger SdpI PF13630.6 gi|121638154|ref|YP_978378.1| - 7.3 6.8 6.4 35 4.6 6.4 2.0 1 1 0 1 1 1 0 SdpI/YhfL protein family SLATT_1 PF18181.1 gi|121638154|ref|YP_978378.1| - 9.7 6.2 8.3 0.41 10.6 1.5 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 DUF202 PF02656.15 gi|121638155|ref|YP_978379.1| - 1.7e-12 47.5 2.8 2.3e-12 47.2 0.3 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF202) MamL-1 PF09596.10 gi|121638156|ref|YP_978380.1| - 0.34 11.2 2.2 0.5 10.7 2.2 1.2 1 0 0 1 1 1 0 MamL-1 domain CDPS PF16715.5 gi|121638157|ref|YP_978381.1| - 4.2e-87 291.4 0.0 5.2e-87 291.1 0.0 1.1 1 0 0 1 1 1 1 Cyclodipeptide synthase Spo12 PF05032.12 gi|121638157|ref|YP_978381.1| - 0.26 11.2 0.6 0.53 10.2 0.6 1.5 1 0 0 1 1 1 0 Spo12 family p450 PF00067.22 gi|121638158|ref|YP_978382.1| - 1e-16 60.8 0.0 1.8e-14 53.3 0.0 2.5 2 1 0 2 2 2 1 Cytochrome P450 GDPD PF03009.17 gi|121638159|ref|YP_978383.1| - 2.8e-20 73.1 0.0 2.4e-19 70.1 0.0 2.0 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family FAD-oxidase_C PF02913.19 gi|121638160|ref|YP_978384.1| - 1.3e-58 198.6 0.1 2e-58 198.0 0.1 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|121638160|ref|YP_978384.1| - 3.4e-38 130.5 2.3 7.2e-38 129.5 2.3 1.6 1 0 0 1 1 1 1 FAD binding domain GHMP_kinases_C PF08544.13 gi|121638160|ref|YP_978384.1| - 9.7 6.6 6.5 7 7.1 0.1 3.2 3 1 0 3 3 3 0 GHMP kinases C terminal PHO4 PF01384.20 gi|121638161|ref|YP_978385.1| - 1e-109 366.6 34.4 8.7e-109 363.6 34.4 2.0 1 1 0 1 1 1 1 Phosphate transporter family LysR_substrate PF03466.20 gi|121638162|ref|YP_978386.1| - 2.7e-44 151.0 8.8 4.7e-44 150.2 8.8 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|121638162|ref|YP_978386.1| - 1.3e-19 69.9 3.1 2.9e-19 68.8 1.6 2.3 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 gi|121638162|ref|YP_978386.1| - 7e-08 31.8 0.0 1.8e-07 30.5 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain MarR_2 PF12802.7 gi|121638162|ref|YP_978386.1| - 0.00038 20.3 0.2 0.0018 18.1 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|121638162|ref|YP_978386.1| - 0.0057 16.7 2.6 0.12 12.5 0.1 2.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|121638162|ref|YP_978386.1| - 0.05 13.5 0.6 0.17 11.7 0.6 2.0 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Med19 PF10278.9 gi|121638163|ref|YP_978387.1| - 0.024 14.6 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Abhydrolase_3 PF07859.13 gi|121638164|ref|YP_978388.1| - 6.5e-20 71.9 0.1 9.6e-20 71.3 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121638164|ref|YP_978388.1| - 1.7e-13 50.5 0.1 8.3e-13 48.3 0.1 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family COesterase PF00135.28 gi|121638164|ref|YP_978388.1| - 3.7e-12 45.9 0.0 3.5e-11 42.7 0.0 1.9 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_1 PF00561.20 gi|121638164|ref|YP_978388.1| - 0.00055 19.6 0.2 0.74 9.4 0.1 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121638164|ref|YP_978388.1| - 0.0021 17.4 0.6 0.013 14.8 0.0 2.3 2 1 1 3 3 3 1 Serine aminopeptidase, S33 LIP PF03583.14 gi|121638164|ref|YP_978388.1| - 0.018 14.4 0.0 0.099 12.0 0.0 2.0 2 0 0 2 2 2 0 Secretory lipase FSH1 PF03959.13 gi|121638164|ref|YP_978388.1| - 0.16 11.6 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) WES_acyltransf PF03007.16 gi|121638165|ref|YP_978389.1| - 3e-83 279.6 0.0 4.1e-83 279.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121638165|ref|YP_978389.1| - 1e-27 96.9 0.0 1.6e-27 96.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AATase PF07247.12 gi|121638165|ref|YP_978389.1| - 0.065 11.8 0.0 0.089 11.3 0.0 1.1 1 0 0 1 1 1 0 Alcohol acetyltransferase DSBA PF01323.20 gi|121638167|ref|YP_978391.1| - 1.2e-08 35.0 0.0 1.3e-06 28.3 0.0 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Na_H_Exchanger PF00999.21 gi|121638168|ref|YP_978392.1| - 1.4e-74 251.2 37.0 1.8e-74 250.9 37.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CDH PF02611.15 gi|121638170|ref|YP_978394.1| - 5.3e-70 235.5 0.0 6.2e-70 235.3 0.0 1.0 1 0 0 1 1 1 1 CDP-diacylglycerol pyrophosphatase Myco_19_kDa PF05481.12 gi|121638172|ref|YP_978396.1| - 4.8e-12 46.2 0.6 1.3e-11 44.8 0.6 1.6 1 1 0 1 1 1 1 Mycobacterium 19 kDa lipoprotein antigen Rhodanese PF00581.20 gi|121638173|ref|YP_978397.1| - 1.4e-31 109.2 0.0 5.5e-18 65.4 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain PNP_UDP_1 PF01048.20 gi|121638174|ref|YP_978398.1| - 5.4e-23 81.5 0.2 1.2e-13 50.9 0.3 2.1 2 0 0 2 2 2 2 Phosphorylase superfamily Aminotran_1_2 PF00155.21 gi|121638175|ref|YP_978399.1| - 2.5e-28 99.3 0.0 2.9e-28 99.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|121638175|ref|YP_978399.1| - 0.09 11.5 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 gi|121638175|ref|YP_978399.1| - 0.16 11.3 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase SPOC PF07744.13 gi|121638175|ref|YP_978399.1| - 0.19 11.6 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 SPOC domain UPF0167 PF03691.14 gi|121638176|ref|YP_978400.1| - 3.6e-61 205.9 0.0 4.2e-61 205.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0167) Abhydrolase_1 PF00561.20 gi|121638177|ref|YP_978401.1| - 1.2e-19 71.0 0.1 2.1e-19 70.2 0.1 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121638177|ref|YP_978401.1| - 3e-13 50.9 13.0 3.7e-13 50.6 13.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121638177|ref|YP_978401.1| - 5.3e-08 32.4 0.0 2.3e-07 30.3 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Aldo_ket_red PF00248.21 gi|121638179|ref|YP_978403.1| - 1.2e-55 188.8 0.0 1.4e-55 188.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family HSP90 PF00183.18 gi|121638180|ref|YP_978404.1| - 1.6e-141 472.7 0.0 6.4e-135 451.0 0.0 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 gi|121638180|ref|YP_978404.1| - 6.4e-13 48.7 0.1 1.3e-12 47.7 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|121638180|ref|YP_978404.1| - 1e-10 42.1 0.0 1.9e-10 41.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Flagellar_rod PF05149.12 gi|121638180|ref|YP_978404.1| - 0.083 12.3 1.0 8.1 5.8 0.1 2.5 2 0 0 2 2 2 0 Paraflagellar rod protein Lactamase_B PF00753.27 gi|121638181|ref|YP_978405.1| - 8.2e-18 65.1 10.6 2e-17 63.8 10.5 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121638181|ref|YP_978405.1| - 1.8e-05 24.3 1.0 3e-05 23.6 1.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Cutinase PF01083.22 gi|121638182|ref|YP_978406.1| - 5.7e-53 179.5 0.0 6.9e-53 179.2 0.0 1.1 1 0 0 1 1 1 1 Cutinase Lipase_3 PF01764.25 gi|121638182|ref|YP_978406.1| - 0.019 14.8 0.9 0.25 11.2 0.0 2.2 1 1 1 2 2 2 0 Lipase (class 3) DUF1918 PF08940.11 gi|121638183|ref|YP_978407.1| - 5.4e-28 96.4 1.2 7.9e-28 95.9 1.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1918) Amidohydro_2 PF04909.14 gi|121638184|ref|YP_978408.1| - 7.9e-47 160.4 0.7 8.8e-47 160.3 0.7 1.0 1 0 0 1 1 1 1 Amidohydrolase Condensation PF00668.20 gi|121638186|ref|YP_978410.1| - 2.3e-08 33.2 0.0 7.3e-05 21.6 0.0 2.1 2 0 0 2 2 2 2 Condensation domain WES_acyltransf PF03007.16 gi|121638186|ref|YP_978410.1| - 0.016 15.0 0.2 0.074 12.8 0.2 1.9 1 1 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Herpes_U59 PF04529.12 gi|121638186|ref|YP_978410.1| - 0.05 12.7 0.0 0.087 11.9 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus U59 protein SNARE_assoc PF09335.11 gi|121638188|ref|YP_978412.1| - 4.7e-10 40.0 4.7 8.4e-10 39.2 2.5 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein HemY_N PF07219.13 gi|121638188|ref|YP_978412.1| - 0.023 14.9 0.8 0.04 14.1 0.8 1.4 1 0 0 1 1 1 0 HemY protein N-terminus DUF4381 PF14316.6 gi|121638188|ref|YP_978412.1| - 0.047 13.9 0.4 0.07 13.4 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Phage_holin_3_5 PF16085.5 gi|121638188|ref|YP_978412.1| - 0.15 12.2 3.0 0.3 11.3 3.0 1.6 1 1 0 1 1 1 0 Bacteriophage holin Hol, superfamily III Peptidase_U4 PF03419.13 gi|121638188|ref|YP_978412.1| - 0.17 11.1 1.4 0.22 10.8 1.4 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Hydrolase_4 PF12146.8 gi|121638189|ref|YP_978413.1| - 3.8e-14 52.6 0.1 7.6e-09 35.2 0.1 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|121638189|ref|YP_978413.1| - 1.1e-09 38.3 0.1 6.3e-05 22.8 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121638189|ref|YP_978413.1| - 3e-07 31.3 12.6 0.0011 19.6 1.3 2.4 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|121638189|ref|YP_978413.1| - 1.9e-05 24.4 0.1 0.0012 18.5 0.1 2.1 2 0 0 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 gi|121638189|ref|YP_978413.1| - 0.00016 20.5 0.1 0.07 11.8 0.1 2.6 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|121638189|ref|YP_978413.1| - 0.00021 20.9 0.0 0.00078 19.0 0.0 1.9 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|121638189|ref|YP_978413.1| - 0.00056 19.5 0.0 0.0019 17.8 0.0 1.7 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 gi|121638189|ref|YP_978413.1| - 0.0015 18.5 0.1 0.0025 17.7 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|121638189|ref|YP_978413.1| - 0.19 11.6 0.0 2.2 8.1 0.0 2.1 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF433 PF04255.14 gi|121638193|ref|YP_978417.1| - 1.4e-12 47.3 0.0 2.4e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF433) HTH_28 PF13518.6 gi|121638193|ref|YP_978417.1| - 0.025 14.7 0.0 5.1 7.3 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_integrase PF00589.22 gi|121638194|ref|YP_978418.1| - 1e-15 58.0 0.0 1.3e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family HTH_17 PF12728.7 gi|121638196|ref|YP_978420.1| - 2.3e-13 50.1 0.1 3.6e-13 49.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain AbiEi_4 PF13338.6 gi|121638196|ref|YP_978420.1| - 0.00017 21.7 0.0 0.00046 20.3 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin HTH_29 PF13551.6 gi|121638196|ref|YP_978420.1| - 0.00021 21.2 0.2 0.00065 19.7 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|121638196|ref|YP_978420.1| - 0.00033 20.3 0.0 0.0013 18.5 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|121638196|ref|YP_978420.1| - 0.00091 19.2 0.1 0.0016 18.3 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MerR PF00376.23 gi|121638196|ref|YP_978420.1| - 0.003 17.3 0.1 0.0063 16.3 0.1 1.6 1 0 0 1 1 1 1 MerR family regulatory protein HTH_8 PF02954.19 gi|121638196|ref|YP_978420.1| - 0.011 15.5 0.2 0.03 14.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_37 PF13744.6 gi|121638196|ref|YP_978420.1| - 0.011 15.6 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3853 PF12964.7 gi|121638196|ref|YP_978420.1| - 0.024 14.8 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) DUF134 PF02001.16 gi|121638196|ref|YP_978420.1| - 0.038 14.5 0.0 0.11 13.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF134 HTH_6 PF01418.17 gi|121638196|ref|YP_978420.1| - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_22 PF13309.6 gi|121638196|ref|YP_978420.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_3 PF01381.22 gi|121638196|ref|YP_978420.1| - 0.11 12.6 0.8 0.15 12.2 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix UvrD_C_2 PF13538.6 gi|121638197|ref|YP_978421.1| - 0.00017 21.3 1.7 0.00056 19.7 1.7 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 gi|121638197|ref|YP_978421.1| - 0.022 14.5 0.2 0.027 14.2 0.2 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Styelin PF17562.2 gi|121638198|ref|YP_978422.1| - 0.21 11.9 0.5 0.68 10.3 0.1 2.0 2 0 0 2 2 2 0 Styelin CMD PF02627.20 gi|121638199|ref|YP_978423.1| - 0.0069 16.4 0.4 0.0069 16.4 0.4 2.0 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family PmbA_TldD PF01523.16 gi|121638200|ref|YP_978424.1| - 1.4e-26 93.9 0.0 2e-26 93.5 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|121638201|ref|YP_978425.1| - 1.6e-49 169.2 0.0 2.1e-49 168.9 0.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase BPD_transp_1 PF00528.22 gi|121638202|ref|YP_978426.1| - 2.6e-19 69.7 15.9 2.6e-19 69.7 15.9 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121638203|ref|YP_978427.1| - 5.8e-20 71.8 15.9 5.8e-20 71.8 15.9 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_1 PF01547.25 gi|121638204|ref|YP_978428.1| - 9.9e-45 153.8 5.8 1.4e-44 153.3 5.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|121638204|ref|YP_978428.1| - 2.1e-19 70.4 1.3 2.9e-19 69.9 1.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Usp PF00582.26 gi|121638205|ref|YP_978429.1| - 8.1e-30 104.2 2.3 5.6e-18 65.8 1.2 2.0 2 0 0 2 2 2 2 Universal stress protein family AA_permease_2 PF13520.6 gi|121638206|ref|YP_978430.1| - 1.1e-51 176.1 42.1 1.5e-51 175.6 42.1 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|121638206|ref|YP_978430.1| - 3.7e-36 124.7 38.5 5.1e-36 124.3 38.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_C PF13906.6 gi|121638206|ref|YP_978430.1| - 2.8e-11 43.3 5.4 2.8e-11 43.3 5.4 4.3 5 0 0 5 5 5 1 C-terminus of AA_permease Spore_permease PF03845.13 gi|121638206|ref|YP_978430.1| - 0.00024 20.0 11.3 0.00085 18.2 0.2 2.8 3 0 0 3 3 3 2 Spore germination protein ThiS PF02597.20 gi|121638206|ref|YP_978430.1| - 0.16 12.6 0.0 0.32 11.6 0.0 1.5 1 0 0 1 1 1 0 ThiS family RP-C_C PF11800.8 gi|121638206|ref|YP_978430.1| - 0.21 11.6 1.8 0.35 10.9 1.8 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region Aminotran_3 PF00202.21 gi|121638207|ref|YP_978431.1| - 1.9e-39 135.5 0.0 2.1e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_3 PF00202.21 gi|121638208|ref|YP_978432.1| - 1.4e-34 119.4 0.0 2.1e-34 118.9 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class-III Amidinotransf PF02274.17 gi|121638209|ref|YP_978433.1| - 8e-18 64.6 0.0 1.1e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 Amidinotransferase HTH_AsnC-type PF13404.6 gi|121638210|ref|YP_978434.1| - 1.9e-15 56.4 1.1 9.9e-15 54.1 0.4 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|121638210|ref|YP_978434.1| - 2.2e-14 53.2 0.1 3.7e-14 52.4 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|121638210|ref|YP_978434.1| - 5.4e-14 51.5 0.0 8.6e-14 50.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|121638210|ref|YP_978434.1| - 3.9e-05 23.5 0.1 0.00024 21.0 0.0 2.2 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|121638210|ref|YP_978434.1| - 8.7e-05 22.3 0.6 0.00017 21.4 0.1 1.7 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|121638210|ref|YP_978434.1| - 0.004 17.0 0.0 0.095 12.6 0.0 2.3 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|121638210|ref|YP_978434.1| - 0.007 16.4 0.5 0.025 14.6 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain DUF4777 PF16007.5 gi|121638210|ref|YP_978434.1| - 0.024 14.9 0.1 0.063 13.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4777) Sigma70_r4 PF04545.16 gi|121638210|ref|YP_978434.1| - 0.032 13.8 0.7 0.05 13.1 0.1 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 LPD37 PF18853.1 gi|121638210|ref|YP_978434.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 37 CbiQ PF02361.16 gi|121638211|ref|YP_978435.1| - 8e-50 169.5 7.9 1e-49 169.1 7.9 1.1 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|121638212|ref|YP_978436.1| - 6.8e-44 149.7 0.0 8.4e-21 74.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|121638212|ref|YP_978436.1| - 2.7e-11 43.8 10.2 4.8e-06 26.6 0.0 3.7 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121638212|ref|YP_978436.1| - 2.5e-08 33.6 3.0 0.11 11.9 0.0 4.1 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|121638212|ref|YP_978436.1| - 5.4e-08 32.5 0.5 0.01 15.6 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121638212|ref|YP_978436.1| - 9.9e-07 29.5 0.3 0.027 15.0 0.1 2.1 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|121638212|ref|YP_978436.1| - 4.6e-06 27.1 9.2 0.0024 18.3 1.7 2.5 2 1 0 2 2 2 2 AAA ATPase domain IstB_IS21 PF01695.17 gi|121638212|ref|YP_978436.1| - 5e-05 23.1 1.0 2.9 7.6 0.2 4.0 4 0 0 4 4 4 1 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 gi|121638212|ref|YP_978436.1| - 0.00012 21.5 0.1 0.071 12.5 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|121638212|ref|YP_978436.1| - 0.00013 22.3 5.0 0.0069 16.7 0.1 3.5 3 1 0 3 3 3 1 AAA domain SbcCD_C PF13558.6 gi|121638212|ref|YP_978436.1| - 0.00043 20.5 2.9 0.58 10.4 0.1 3.5 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.6 gi|121638212|ref|YP_978436.1| - 0.0011 19.2 3.3 0.27 11.5 0.9 2.6 2 0 0 2 2 2 2 AAA domain AAA_13 PF13166.6 gi|121638212|ref|YP_978436.1| - 0.0044 15.7 3.0 0.17 10.5 0.2 2.1 2 0 0 2 2 2 2 AAA domain AAA PF00004.29 gi|121638212|ref|YP_978436.1| - 0.0076 16.7 2.6 1.1 9.6 0.5 3.3 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121638212|ref|YP_978436.1| - 0.0087 15.8 0.5 3.8 7.2 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 gi|121638212|ref|YP_978436.1| - 0.0098 15.8 5.5 1.3 8.9 0.1 3.1 3 0 0 3 3 3 2 NACHT domain DUF87 PF01935.17 gi|121638212|ref|YP_978436.1| - 0.01 15.9 1.7 0.041 14.0 0.1 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_24 PF13479.6 gi|121638212|ref|YP_978436.1| - 0.012 15.4 1.6 2.7 7.7 0.0 2.6 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|121638212|ref|YP_978436.1| - 0.015 15.5 6.4 0.58 10.3 0.3 3.4 2 2 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|121638212|ref|YP_978436.1| - 0.016 15.0 0.0 0.41 10.3 0.0 2.3 3 0 0 3 3 3 0 AAA ATPase domain Mg_chelatase PF01078.21 gi|121638212|ref|YP_978436.1| - 0.021 14.2 0.4 6 6.2 0.1 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 gi|121638212|ref|YP_978436.1| - 0.03 13.4 0.1 3.5 6.6 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein TniB PF05621.11 gi|121638212|ref|YP_978436.1| - 0.031 13.7 0.1 6 6.2 0.0 3.3 4 0 0 4 4 4 0 Bacterial TniB protein DUF3584 PF12128.8 gi|121638212|ref|YP_978436.1| - 0.038 11.5 0.9 0.1 10.1 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Sigma54_activat PF00158.26 gi|121638212|ref|YP_978436.1| - 0.052 13.2 0.2 1.7 8.3 0.0 2.9 3 0 0 3 3 3 0 Sigma-54 interaction domain DEAD PF00270.29 gi|121638212|ref|YP_978436.1| - 0.058 13.2 0.3 17 5.1 0.0 3.1 3 0 0 3 3 3 0 DEAD/DEAH box helicase AAA_25 PF13481.6 gi|121638212|ref|YP_978436.1| - 0.078 12.6 11.3 0.84 9.2 1.7 3.4 2 2 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|121638212|ref|YP_978436.1| - 0.12 12.7 1.7 30 4.9 0.3 3.0 3 0 0 3 3 3 0 AAA domain Ploopntkinase1 PF18748.1 gi|121638212|ref|YP_978436.1| - 0.18 11.3 0.0 11 5.5 0.0 2.2 2 0 0 2 2 2 0 P-loop Nucleotide Kinase1 TrwB_AAD_bind PF10412.9 gi|121638212|ref|YP_978436.1| - 0.19 10.6 1.4 1.3 7.8 0.1 2.5 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain RNA_helicase PF00910.22 gi|121638212|ref|YP_978436.1| - 0.2 12.1 1.0 12 6.3 0.1 2.3 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 gi|121638212|ref|YP_978436.1| - 0.26 10.5 1.0 17 4.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain MarR PF01047.22 gi|121638213|ref|YP_978437.1| - 2.1e-16 59.6 0.0 4.6e-16 58.5 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|121638213|ref|YP_978437.1| - 2.4e-12 46.5 0.8 2.4e-12 46.5 0.8 2.5 3 1 0 3 3 3 1 MarR family HTH_27 PF13463.6 gi|121638213|ref|YP_978437.1| - 7.8e-09 35.9 0.1 1.5e-08 35.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|121638213|ref|YP_978437.1| - 0.00021 21.1 0.0 0.00056 19.7 0.0 1.7 2 0 0 2 2 2 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|121638213|ref|YP_978437.1| - 0.00076 19.5 1.0 0.0017 18.4 0.2 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|121638213|ref|YP_978437.1| - 0.0038 17.1 0.0 0.0058 16.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|121638213|ref|YP_978437.1| - 0.014 15.0 0.0 0.035 13.7 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PE PF00934.20 gi|121638214|ref|YP_978438.1| - 2.8e-31 107.7 8.4 2.8e-31 107.7 8.4 4.1 3 2 1 4 4 4 1 PE family T7SS_ESX_EspC PF10824.8 gi|121638214|ref|YP_978438.1| - 0.027 14.9 3.7 0.027 14.9 3.7 3.5 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm CRPA PF05745.11 gi|121638214|ref|YP_978438.1| - 0.29 11.1 1.6 12 5.9 0.0 2.7 2 1 0 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) DUF1484 PF07363.11 gi|121638214|ref|YP_978438.1| - 0.6 11.1 4.0 2 9.4 0.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1484) MFS_1 PF07690.16 gi|121638215|ref|YP_978439.1| - 2.9e-16 59.3 43.5 2.9e-16 59.3 43.5 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily ETRAMP PF09716.10 gi|121638215|ref|YP_978439.1| - 3.2 7.9 3.9 5.9 7.0 0.0 2.9 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) DUF2304 PF10066.9 gi|121638215|ref|YP_978439.1| - 4.9 7.4 7.3 17 5.7 0.8 3.3 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2304) Lipoprotein_21 PF14041.6 gi|121638216|ref|YP_978440.1| - 2.2e-24 85.4 0.0 3.5e-24 84.7 0.0 1.3 1 0 0 1 1 1 1 LppP/LprE lipoprotein Malic_M PF03949.15 gi|121638219|ref|YP_978443.1| - 2.2e-98 328.6 0.2 2.8e-98 328.3 0.2 1.1 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.19 gi|121638219|ref|YP_978443.1| - 7.4e-67 224.7 0.0 1.2e-66 224.0 0.0 1.3 1 0 0 1 1 1 1 Malic enzyme, N-terminal domain FGAR-AT_linker PF18072.1 gi|121638219|ref|YP_978443.1| - 0.18 12.4 0.0 0.44 11.1 0.0 1.7 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase linker domain DUF4551 PF15087.6 gi|121638219|ref|YP_978443.1| - 0.26 10.1 0.1 0.65 8.8 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4551) MFS_1 PF07690.16 gi|121638220|ref|YP_978444.1| - 1.3e-57 195.3 49.3 2.6e-57 194.3 46.4 2.1 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|121638220|ref|YP_978444.1| - 5.1e-07 28.9 12.7 5.1e-07 28.9 12.7 3.3 1 1 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 gi|121638220|ref|YP_978444.1| - 0.01 14.4 37.0 0.44 9.0 6.7 3.2 1 1 1 2 2 2 0 MFS/sugar transport protein YrhK PF14145.6 gi|121638220|ref|YP_978444.1| - 0.43 10.5 7.9 0.062 13.2 1.4 3.0 3 0 0 3 3 3 0 YrhK-like protein OATP PF03137.20 gi|121638220|ref|YP_978444.1| - 1.2 7.3 22.9 0.9 7.7 0.4 4.2 2 2 2 5 5 5 0 Organic Anion Transporter Polypeptide (OATP) family PALP PF00291.25 gi|121638221|ref|YP_978445.1| - 1.9e-70 237.6 2.2 2.1e-70 237.5 2.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Hexapep PF00132.24 gi|121638222|ref|YP_978446.1| - 5.8e-16 57.5 13.4 7.4e-09 35.0 2.0 3.1 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|121638222|ref|YP_978446.1| - 4.3e-07 29.6 12.3 2.8e-05 23.7 2.6 3.5 2 2 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.14 gi|121638222|ref|YP_978446.1| - 0.00032 21.0 0.0 0.00046 20.5 0.0 1.2 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Nitroreductase PF00881.24 gi|121638224|ref|YP_978448.1| - 0.00017 21.7 0.5 1.3 9.1 0.1 3.9 3 2 0 4 4 4 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121638224|ref|YP_978448.1| - 0.0059 16.2 0.0 0.018 14.7 0.0 1.8 2 1 0 2 2 2 1 Putative TM nitroreductase CobW_C PF07683.14 gi|121638224|ref|YP_978448.1| - 0.028 14.4 0.1 0.064 13.2 0.1 1.6 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain ThiF PF00899.21 gi|121638225|ref|YP_978449.1| - 2.8e-54 184.0 0.0 4e-54 183.5 0.0 1.1 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 gi|121638225|ref|YP_978449.1| - 0.15 11.6 0.2 2.1 7.9 0.1 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MMPL PF03176.15 gi|121638226|ref|YP_978450.1| - 2.5e-166 552.6 25.2 3.7e-114 381.1 9.1 2.8 3 0 0 3 3 3 2 MMPL family Syntaxin-6_N PF09177.11 gi|121638226|ref|YP_978450.1| - 0.0034 17.9 0.2 0.03 14.9 0.1 2.1 2 0 0 2 2 2 1 Syntaxin 6, N-terminal Prominin PF05478.11 gi|121638226|ref|YP_978450.1| - 0.0035 15.4 0.3 0.0035 15.4 0.3 1.5 2 0 0 2 2 2 1 Prominin DUF1664 PF07889.12 gi|121638226|ref|YP_978450.1| - 0.035 14.1 1.6 1.8 8.6 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 gi|121638226|ref|YP_978450.1| - 0.043 13.9 1.0 0.37 10.8 0.6 2.1 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus SlyX PF04102.12 gi|121638226|ref|YP_978450.1| - 0.046 14.3 1.1 22 5.7 0.3 3.3 3 0 0 3 3 3 0 SlyX ACR_tran PF00873.19 gi|121638226|ref|YP_978450.1| - 0.055 11.1 15.7 0.8 7.3 0.2 3.0 2 1 0 2 2 2 0 AcrB/AcrD/AcrF family APG17 PF04108.12 gi|121638226|ref|YP_978450.1| - 0.15 11.2 1.8 0.23 10.5 1.8 1.2 1 0 0 1 1 1 0 Autophagy protein Apg17 DUF948 PF06103.11 gi|121638226|ref|YP_978450.1| - 0.23 11.7 0.1 0.23 11.7 0.1 5.6 4 1 1 5 5 4 0 Bacterial protein of unknown function (DUF948) Cytochrom_B562 PF07361.11 gi|121638226|ref|YP_978450.1| - 0.39 11.4 9.6 0.044 14.4 1.7 2.9 2 1 1 3 3 3 0 Cytochrome b562 Spidroin_N PF16763.5 gi|121638226|ref|YP_978450.1| - 0.54 10.3 6.8 0.81 9.7 0.5 2.6 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term MMPL PF03176.15 gi|121638227|ref|YP_978451.1| - 5.7e-44 150.4 9.0 6.2e-44 150.3 9.0 1.0 1 0 0 1 1 1 1 MMPL family PE PF00934.20 gi|121638228|ref|YP_978452.1| - 1.5e-31 108.5 21.0 1.5e-31 108.5 21.0 2.5 2 0 0 2 2 2 1 PE family DUF1631 PF07793.11 gi|121638228|ref|YP_978452.1| - 1.4 7.3 6.3 0.074 11.5 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1631) Toprim_N PF08275.11 gi|121638231|ref|YP_978455.1| - 8.3e-36 122.9 0.0 1.3e-35 122.2 0.0 1.3 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain zf-CHC2 PF01807.20 gi|121638231|ref|YP_978455.1| - 1.1e-34 118.2 0.0 2e-34 117.3 0.0 1.4 1 0 0 1 1 1 1 CHC2 zinc finger DnaG_DnaB_bind PF08278.11 gi|121638231|ref|YP_978455.1| - 3.4e-31 108.4 0.1 9.1e-31 107.0 0.1 1.8 1 0 0 1 1 1 1 DNA primase DnaG DnaB-binding DnaB_bind PF10410.9 gi|121638231|ref|YP_978455.1| - 1.4e-18 66.8 0.3 4.3e-18 65.2 0.0 2.1 2 0 0 2 2 2 1 DnaB-helicase binding domain of primase Toprim_4 PF13662.6 gi|121638231|ref|YP_978455.1| - 3.6e-13 49.8 0.1 8.6e-13 48.6 0.1 1.6 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|121638231|ref|YP_978455.1| - 2.1e-08 34.5 0.0 4.7e-08 33.3 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|121638231|ref|YP_978455.1| - 7.5e-07 29.3 0.0 1.7e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Toprim domain Toprim_3 PF13362.6 gi|121638231|ref|YP_978455.1| - 0.00019 21.7 0.1 0.00079 19.7 0.0 2.1 2 0 0 2 2 2 1 Toprim domain HD PF01966.22 gi|121638232|ref|YP_978456.1| - 1.2e-20 74.0 0.0 2.2e-20 73.1 0.0 1.5 1 0 0 1 1 1 1 HD domain HD_assoc PF13286.6 gi|121638232|ref|YP_978456.1| - 1e-15 58.0 0.5 2e-15 57.1 0.5 1.5 1 0 0 1 1 1 1 Phosphohydrolase-associated domain TPM_phosphatase PF04536.14 gi|121638233|ref|YP_978457.1| - 1.9e-17 63.6 0.0 4.1e-17 62.5 0.0 1.6 1 0 0 1 1 1 1 TPM domain CK2S PF15011.6 gi|121638233|ref|YP_978457.1| - 0.032 14.1 0.1 5.9 6.7 0.0 2.8 2 0 0 2 2 2 0 Casein Kinase 2 substrate TMEM51 PF15345.6 gi|121638233|ref|YP_978457.1| - 0.048 13.5 0.1 0.14 12.0 0.1 1.8 1 0 0 1 1 1 0 Transmembrane protein 51 EssA PF10661.9 gi|121638233|ref|YP_978457.1| - 0.074 12.9 0.0 15 5.4 0.0 2.3 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA DUF1664 PF07889.12 gi|121638233|ref|YP_978457.1| - 0.094 12.8 1.9 10 6.2 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) HHH_8 PF14716.6 gi|121638233|ref|YP_978457.1| - 0.16 12.4 2.0 0.69 10.3 2.0 2.1 1 0 0 1 1 1 0 Helix-hairpin-helix domain TMEM154 PF15102.6 gi|121638233|ref|YP_978457.1| - 0.2 11.6 0.0 0.54 10.2 0.0 1.7 1 0 0 1 1 1 0 TMEM154 protein family SlyX PF04102.12 gi|121638233|ref|YP_978457.1| - 4.4 8.0 13.5 4.6 7.9 0.5 4.0 4 0 0 4 4 4 0 SlyX Rab5-bind PF09311.11 gi|121638233|ref|YP_978457.1| - 7.5 5.8 8.1 1.7 8.0 0.4 2.9 2 2 2 4 4 4 0 Rabaptin-like protein WXG100 PF06013.12 gi|121638234|ref|YP_978458.1| - 1.7e-08 34.6 0.9 1.8e-08 34.5 0.9 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Nup214_FG PF18617.1 gi|121638234|ref|YP_978458.1| - 0.063 13.8 1.3 0.067 13.7 0.3 1.5 2 0 0 2 2 2 0 Nucleoporin Nup214 phenylalanine-glycine (FG) domain PPE PF00823.19 gi|121638235|ref|YP_978459.1| - 7.8e-56 188.5 27.1 1.4e-55 187.7 27.1 1.4 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121638235|ref|YP_978459.1| - 2.7e-52 174.4 232.7 3e-10 39.8 27.4 8.3 1 1 7 9 9 9 9 Pentapeptide repeats (8 copies) HGTP_anticodon PF03129.20 gi|121638236|ref|YP_978460.1| - 3.4e-19 68.8 0.0 6e-19 68.0 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|121638236|ref|YP_978460.1| - 1.7e-07 31.4 0.0 2.5e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HTH_5 PF01022.20 gi|121638237|ref|YP_978461.1| - 6.9e-15 54.7 0.3 6.9e-15 54.7 0.3 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121638237|ref|YP_978461.1| - 2.1e-11 43.7 0.9 3.7e-11 42.9 0.9 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121638237|ref|YP_978461.1| - 0.00024 20.9 0.3 0.00062 19.6 0.3 1.8 1 1 0 1 1 1 1 MarR family PaaX PF07848.12 gi|121638237|ref|YP_978461.1| - 0.0017 18.6 0.0 0.0029 17.8 0.0 1.4 1 0 0 1 1 1 1 PaaX-like protein Rrf2 PF02082.20 gi|121638237|ref|YP_978461.1| - 0.01 16.2 0.1 0.013 15.8 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 gi|121638237|ref|YP_978461.1| - 0.032 14.1 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|121638237|ref|YP_978461.1| - 0.079 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HxlR PF01638.17 gi|121638237|ref|YP_978461.1| - 0.091 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix FUR PF01475.19 gi|121638238|ref|YP_978462.1| - 5.3e-39 133.1 0.3 6e-39 132.9 0.3 1.0 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_12 PF08461.10 gi|121638238|ref|YP_978462.1| - 4.5e-05 23.3 0.0 6.5e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain PadR PF03551.14 gi|121638238|ref|YP_978462.1| - 0.0052 16.7 0.0 0.0077 16.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_32 PF13565.6 gi|121638238|ref|YP_978462.1| - 0.018 15.7 0.2 0.048 14.3 0.1 1.7 2 0 0 2 2 2 0 Homeodomain-like domain TrmB PF01978.19 gi|121638238|ref|YP_978462.1| - 0.023 14.6 0.0 0.049 13.5 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|121638238|ref|YP_978462.1| - 0.023 14.8 0.4 0.036 14.1 0.4 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Arg_repressor PF01316.21 gi|121638238|ref|YP_978462.1| - 0.044 13.6 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain SR1P PF13790.6 gi|121638238|ref|YP_978462.1| - 0.17 12.1 2.2 1.4 9.1 0.1 2.5 3 0 0 3 3 3 0 SR1 protein Prenyltransf PF01255.19 gi|121638240|ref|YP_978464.1| - 5.1e-72 242.0 0.1 6e-72 241.8 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase RecO_C PF02565.15 gi|121638241|ref|YP_978465.1| - 4.6e-31 107.7 0.3 5.7e-31 107.4 0.3 1.1 1 0 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 gi|121638241|ref|YP_978465.1| - 4e-28 97.2 0.1 2.7e-27 94.5 0.1 2.1 2 0 0 2 2 2 1 Recombination protein O N terminal RecO_N_2 PF13114.6 gi|121638241|ref|YP_978465.1| - 0.011 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 RecO N terminal Amidase PF01425.21 gi|121638242|ref|YP_978466.1| - 1.4e-120 403.3 0.0 1.7e-120 403.0 0.0 1.1 1 0 0 1 1 1 1 Amidase KH_2 PF07650.17 gi|121638243|ref|YP_978467.1| - 3.1e-20 71.8 0.1 6.3e-20 70.8 0.1 1.6 1 0 0 1 1 1 1 KH domain MMR_HSR1 PF01926.23 gi|121638243|ref|YP_978467.1| - 5.3e-20 71.6 0.0 9.8e-20 70.7 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|121638243|ref|YP_978467.1| - 3.7e-09 36.3 0.4 2.6e-07 30.3 0.0 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|121638243|ref|YP_978467.1| - 5.3e-08 32.9 0.4 0.00057 19.8 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|121638243|ref|YP_978467.1| - 1.2e-07 31.9 0.2 0.00013 22.0 0.1 2.3 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 gi|121638243|ref|YP_978467.1| - 2.2e-07 30.6 0.9 7.7e-05 22.3 0.9 2.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 gi|121638243|ref|YP_978467.1| - 7.1e-06 25.8 0.0 2.5e-05 24.1 0.0 1.8 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AIG1 PF04548.16 gi|121638243|ref|YP_978467.1| - 1.6e-05 24.4 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 AIG1 family AAA_22 PF13401.6 gi|121638243|ref|YP_978467.1| - 0.0017 18.6 0.0 0.0079 16.5 0.0 1.9 1 1 1 2 2 2 1 AAA domain SRPRB PF09439.10 gi|121638243|ref|YP_978467.1| - 0.0052 16.2 0.0 0.0095 15.4 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit cobW PF02492.19 gi|121638243|ref|YP_978467.1| - 0.055 13.0 0.6 0.31 10.6 0.1 2.3 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 gi|121638243|ref|YP_978467.1| - 0.15 12.2 0.0 0.54 10.5 0.0 1.9 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 gi|121638243|ref|YP_978467.1| - 0.17 12.3 0.7 1 9.8 0.4 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Ras PF00071.22 gi|121638243|ref|YP_978467.1| - 0.17 11.5 0.0 0.67 9.5 0.0 1.8 1 1 0 1 1 1 0 Ras family DUF21 PF01595.20 gi|121638245|ref|YP_978469.1| - 4.1e-33 114.5 0.2 5.7e-33 114.1 0.2 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 gi|121638245|ref|YP_978469.1| - 1.6e-13 50.9 4.4 1.1e-05 25.7 0.2 3.3 3 0 0 3 3 3 2 CBS domain CorC_HlyC PF03471.17 gi|121638245|ref|YP_978469.1| - 2.1e-12 46.9 0.7 7.4e-12 45.1 0.1 2.2 2 0 0 2 2 2 1 Transporter associated domain UPF0054 PF02130.17 gi|121638246|ref|YP_978470.1| - 6.4e-37 126.2 0.0 1.1e-36 125.5 0.0 1.4 2 0 0 2 2 2 1 Uncharacterized protein family UPF0054 PhoH PF02562.16 gi|121638247|ref|YP_978471.1| - 1.8e-94 315.0 0.0 2.4e-94 314.5 0.0 1.2 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 gi|121638247|ref|YP_978471.1| - 6.3e-11 42.4 0.0 9.7e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|121638247|ref|YP_978471.1| - 1.2e-05 25.7 0.9 1.2e-05 25.7 0.9 2.9 2 1 1 3 3 3 1 AAA domain IstB_IS21 PF01695.17 gi|121638247|ref|YP_978471.1| - 0.00068 19.4 0.0 0.0012 18.6 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein KH_1 PF00013.29 gi|121638247|ref|YP_978471.1| - 0.0013 18.5 0.0 0.0034 17.2 0.0 1.7 1 0 0 1 1 1 1 KH domain AAA_22 PF13401.6 gi|121638247|ref|YP_978471.1| - 0.0043 17.3 0.4 0.081 13.2 0.4 2.5 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 gi|121638247|ref|YP_978471.1| - 0.0087 15.8 0.1 0.28 10.9 0.1 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_25 PF13481.6 gi|121638247|ref|YP_978471.1| - 0.02 14.5 0.6 0.071 12.7 0.1 2.1 2 1 0 2 2 2 0 AAA domain UvrD-helicase PF00580.21 gi|121638247|ref|YP_978471.1| - 0.02 14.4 1.2 4.1 6.8 0.1 2.2 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain Zot PF05707.12 gi|121638247|ref|YP_978471.1| - 0.028 14.1 0.0 7.7 6.1 0.0 2.1 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) PIF1 PF05970.14 gi|121638247|ref|YP_978471.1| - 0.16 11.1 0.1 0.99 8.5 0.0 2.1 2 0 0 2 2 2 0 PIF1-like helicase GGDEF_2 PF17853.1 gi|121638249|ref|YP_978473.1| - 5.2e-15 55.7 2.3 1.5e-14 54.3 0.9 2.4 1 1 1 2 2 2 1 GGDEF-like domain HTH_30 PF13556.6 gi|121638249|ref|YP_978473.1| - 1.3e-10 40.9 3.8 1.3e-10 40.9 3.8 2.3 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain PE PF00934.20 gi|121638250|ref|YP_978474.1| - 6.4e-16 58.5 4.7 6.8e-16 58.4 4.7 1.0 1 0 0 1 1 1 1 PE family Methyltrans_RNA PF04452.14 gi|121638251|ref|YP_978475.1| - 7.9e-60 202.0 0.0 9.2e-60 201.8 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase DnaJ_C PF01556.18 gi|121638252|ref|YP_978476.1| - 2.1e-37 128.5 0.0 2.9e-37 128.0 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|121638252|ref|YP_978476.1| - 9.6e-25 86.5 0.4 1.4e-24 86.0 0.4 1.2 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|121638252|ref|YP_978476.1| - 2e-12 47.3 10.8 3.3e-12 46.6 10.8 1.4 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|121638252|ref|YP_978476.1| - 4.9e-05 23.2 11.1 0.023 14.7 3.0 3.4 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein Lar_restr_allev PF14354.6 gi|121638252|ref|YP_978476.1| - 0.54 10.7 8.2 1.8 9.0 0.1 3.3 3 1 0 3 3 3 0 Restriction alleviation protein Lar HypA PF01155.19 gi|121638252|ref|YP_978476.1| - 4.7 7.3 5.1 5 7.2 1.0 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HrcA PF01628.21 gi|121638253|ref|YP_978477.1| - 3.5e-60 203.7 1.8 4.6e-60 203.3 1.8 1.2 1 0 0 1 1 1 1 HrcA protein C terminal domain HTH_DeoR PF08220.12 gi|121638253|ref|YP_978477.1| - 8.2e-05 22.3 0.2 0.00073 19.2 0.0 2.7 3 0 0 3 3 3 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|121638253|ref|YP_978477.1| - 0.0013 18.6 0.0 0.0042 17.0 0.0 1.9 1 0 0 1 1 1 1 HTH domain HrcA_DNA-bdg PF03444.15 gi|121638253|ref|YP_978477.1| - 0.015 14.9 0.0 0.034 13.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding MbtH PF03621.13 gi|121638256|ref|YP_978480.1| - 5.4e-30 102.6 0.1 6.7e-30 102.3 0.1 1.1 1 0 0 1 1 1 1 MbtH-like protein K_oxygenase PF13434.6 gi|121638257|ref|YP_978481.1| - 7e-12 45.1 0.0 1.3e-11 44.3 0.0 1.4 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 gi|121638257|ref|YP_978481.1| - 5e-05 22.7 0.0 0.0036 16.6 0.0 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121638257|ref|YP_978481.1| - 5.1e-05 22.7 0.0 7.5e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|121638257|ref|YP_978481.1| - 0.0005 20.5 0.0 0.0013 19.1 0.0 1.7 2 0 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|121638257|ref|YP_978481.1| - 0.0072 16.3 8.0 1.4 8.9 1.7 3.8 2 2 1 3 3 3 2 FAD-NAD(P)-binding Shikimate_DH PF01488.20 gi|121638257|ref|YP_978481.1| - 0.012 15.7 0.0 0.03 14.4 0.0 1.7 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase AMP-binding PF00501.28 gi|121638258|ref|YP_978482.1| - 6.6e-85 285.2 0.6 1.4e-83 280.9 0.6 2.2 1 1 0 1 1 1 1 AMP-binding enzyme Condensation PF00668.20 gi|121638258|ref|YP_978482.1| - 4.9e-78 262.8 0.0 2.5e-60 204.4 0.0 2.1 2 0 0 2 2 2 2 Condensation domain AMP-binding_C PF13193.6 gi|121638258|ref|YP_978482.1| - 4.4e-10 40.4 0.6 4e-09 37.3 0.1 3.0 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 gi|121638258|ref|YP_978482.1| - 5.7e-09 36.2 0.3 1.9e-08 34.5 0.3 1.9 1 0 0 1 1 1 1 Phosphopantetheine attachment site Condensation PF00668.20 gi|121638259|ref|YP_978483.1| - 2.7e-127 425.2 0.0 4.1e-72 243.3 0.0 2.1 2 0 0 2 2 2 2 Condensation domain AMP-binding PF00501.28 gi|121638259|ref|YP_978483.1| - 1.1e-101 340.6 0.0 3.4e-94 315.8 0.0 2.9 2 1 0 2 2 2 2 AMP-binding enzyme PP-binding PF00550.25 gi|121638259|ref|YP_978483.1| - 4.9e-28 97.3 0.3 3.1e-15 56.3 0.1 2.8 2 0 0 2 2 2 2 Phosphopantetheine attachment site AMP-binding_C PF13193.6 gi|121638259|ref|YP_978483.1| - 5.3e-10 40.1 0.8 2.6e-09 37.9 0.5 2.4 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Acyl_transf_1 PF00698.21 gi|121638260|ref|YP_978484.1| - 2.7e-48 165.1 0.1 4.9e-48 164.3 0.1 1.4 1 0 0 1 1 1 1 Acyl transferase domain KR PF08659.10 gi|121638260|ref|YP_978484.1| - 2.5e-34 118.8 1.6 4.8e-34 117.8 1.6 1.5 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 gi|121638260|ref|YP_978484.1| - 1.9e-10 40.5 0.4 4.1e-10 39.5 0.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase PP-binding PF00550.25 gi|121638260|ref|YP_978484.1| - 1e-09 38.6 0.9 5.1e-09 36.4 0.3 2.6 2 0 0 2 2 2 1 Phosphopantetheine attachment site Epimerase PF01370.21 gi|121638260|ref|YP_978484.1| - 5e-06 26.2 0.0 1.5e-05 24.6 0.1 1.8 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family adh_short_C2 PF13561.6 gi|121638260|ref|YP_978484.1| - 1.1e-05 25.2 1.1 1.1e-05 25.2 1.1 2.4 3 0 0 3 3 3 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 gi|121638260|ref|YP_978484.1| - 0.00018 20.7 0.1 0.00031 20.0 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|121638260|ref|YP_978484.1| - 0.00043 19.8 0.0 0.00068 19.1 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 gi|121638260|ref|YP_978484.1| - 0.0048 17.2 0.4 0.015 15.6 0.1 2.1 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|121638260|ref|YP_978484.1| - 0.04 13.6 0.0 0.088 12.5 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ketoacyl-synt PF00109.26 gi|121638261|ref|YP_978485.1| - 1.2e-77 261.0 0.2 2e-77 260.2 0.0 1.5 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|121638261|ref|YP_978485.1| - 4.1e-36 123.6 0.6 1.7e-35 121.5 0.5 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 gi|121638261|ref|YP_978485.1| - 2.8e-08 33.4 0.1 5.7e-08 32.4 0.1 1.5 1 0 0 1 1 1 1 Thiolase, N-terminal domain KAsynt_C_assoc PF16197.5 gi|121638261|ref|YP_978485.1| - 6.3e-08 33.1 0.0 1.1e-07 32.3 0.0 1.3 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension AMP-binding PF00501.28 gi|121638262|ref|YP_978486.1| - 2.1e-91 306.7 0.0 3e-91 306.1 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme Thioesterase PF00975.20 gi|121638262|ref|YP_978486.1| - 1.1e-57 195.8 0.0 2.3e-57 194.8 0.0 1.5 1 0 0 1 1 1 1 Thioesterase domain Condensation PF00668.20 gi|121638262|ref|YP_978486.1| - 1.1e-26 93.5 0.0 1.6e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Condensation domain PP-binding PF00550.25 gi|121638262|ref|YP_978486.1| - 5.7e-25 87.5 0.4 5.6e-13 49.1 0.2 2.7 2 0 0 2 2 2 2 Phosphopantetheine attachment site AMP-binding_C PF13193.6 gi|121638262|ref|YP_978486.1| - 4e-07 30.9 0.1 1.3e-06 29.3 0.1 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|121638263|ref|YP_978487.1| - 2e-82 277.1 0.0 2.4e-82 276.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121638263|ref|YP_978487.1| - 2.1e-10 41.4 0.0 7.1e-10 39.7 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Abhydrolase_3 PF07859.13 gi|121638264|ref|YP_978488.1| - 1.4e-38 132.9 0.8 1.6e-38 132.7 0.8 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121638264|ref|YP_978488.1| - 0.00019 20.4 0.0 0.00026 20.0 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Chorismate_bind PF00425.18 gi|121638265|ref|YP_978489.1| - 2.3e-61 207.6 0.0 3.4e-61 207.1 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme Sbt_1 PF05982.12 gi|121638266|ref|YP_978490.1| - 4.4e-110 367.7 10.4 5.1e-110 367.6 10.4 1.0 1 0 0 1 1 1 1 Na+-dependent bicarbonate transporter superfamily DUF2811 PF10929.8 gi|121638266|ref|YP_978490.1| - 0.34 11.2 1.5 9.1 6.6 0.0 3.3 4 0 0 4 4 4 0 Protein of unknown function (DUF2811) Beta-APP PF03494.13 gi|121638266|ref|YP_978490.1| - 3.1 7.7 5.1 0.56 10.1 0.2 2.2 2 0 0 2 2 2 0 Beta-amyloid peptide (beta-APP) Radical_SAM PF04055.21 gi|121638267|ref|YP_978491.1| - 8.2e-16 58.8 0.0 1.3e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 gi|121638267|ref|YP_978491.1| - 0.012 15.6 1.3 0.037 14.1 1.3 1.8 1 1 0 1 1 1 0 HemN C-terminal domain Transglycosylas PF06737.14 gi|121638268|ref|YP_978492.1| - 1.2e-32 112.4 7.6 1.6e-32 112.0 7.6 1.2 1 0 0 1 1 1 1 Transglycosylase-like domain SLT PF01464.20 gi|121638268|ref|YP_978492.1| - 0.027 14.1 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 Transglycosylase SLT domain TPR_21 PF09976.9 gi|121638269|ref|YP_978493.1| - 0.044 13.5 0.2 0.059 13.1 0.2 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Fer4_5 PF12801.7 gi|121638269|ref|YP_978493.1| - 0.15 12.0 5.6 0.26 11.2 5.6 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain NIR_SIR PF01077.22 gi|121638270|ref|YP_978494.1| - 5.4e-48 162.5 0.0 4.9e-35 120.4 0.0 2.3 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|121638270|ref|YP_978494.1| - 6.8e-27 93.1 0.2 2.7e-13 49.6 0.0 3.2 3 0 0 3 3 3 2 Nitrite/Sulfite reductase ferredoxin-like half domain PAPS_reduct PF01507.19 gi|121638271|ref|YP_978495.1| - 7.8e-46 156.3 0.0 9.4e-46 156.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family CbiX PF01903.17 gi|121638272|ref|YP_978496.1| - 9.8e-31 106.3 0.0 1.2e-16 61.0 0.0 2.2 2 0 0 2 2 2 2 CbiX CoA_binding_2 PF13380.6 gi|121638272|ref|YP_978496.1| - 0.024 15.1 0.1 0.076 13.5 0.0 1.8 2 0 0 2 2 2 0 CoA binding domain G_glu_transpept PF01019.21 gi|121638273|ref|YP_978497.1| - 6.3e-154 513.5 0.0 7.3e-154 513.3 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase OPT PF03169.15 gi|121638274|ref|YP_978498.1| - 3.1e-06 26.1 1.5 3.7e-06 25.9 1.5 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein OPT PF03169.15 gi|121638275|ref|YP_978499.1| - 5e-72 243.4 32.0 7.3e-72 242.9 32.0 1.2 1 0 0 1 1 1 1 OPT oligopeptide transporter protein DUF418 PF04235.12 gi|121638275|ref|YP_978499.1| - 0.00057 19.8 0.1 0.00057 19.8 0.1 4.7 3 2 1 5 5 5 1 Protein of unknown function (DUF418) PE PF00934.20 gi|121638276|ref|YP_978500.1| - 4.5e-35 119.8 17.4 6.5e-35 119.3 17.4 1.2 1 0 0 1 1 1 1 PE family ABC_tran PF00005.27 gi|121638277|ref|YP_978501.1| - 3.2e-36 124.9 0.0 4.4e-36 124.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter TOBE_3 PF12857.7 gi|121638277|ref|YP_978501.1| - 4e-11 42.6 0.8 1.1e-10 41.3 0.8 1.7 1 0 0 1 1 1 1 TOBE-like domain AAA_21 PF13304.6 gi|121638277|ref|YP_978501.1| - 1.6e-08 34.7 0.6 0.00044 20.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 gi|121638277|ref|YP_978501.1| - 1.8e-07 31.3 1.9 1.8e-07 31.3 1.9 2.0 2 0 0 2 2 2 1 TOBE domain TOBE_2 PF08402.10 gi|121638277|ref|YP_978501.1| - 5.3e-06 26.5 3.7 8.6e-06 25.8 1.8 2.3 2 0 0 2 2 2 1 TOBE domain SMC_N PF02463.19 gi|121638277|ref|YP_978501.1| - 8.1e-06 25.4 0.0 0.021 14.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|121638277|ref|YP_978501.1| - 5.6e-05 23.4 0.3 0.00035 20.8 0.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121638277|ref|YP_978501.1| - 0.0002 21.8 0.6 0.00047 20.6 0.6 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|121638277|ref|YP_978501.1| - 0.00022 20.9 0.2 0.00042 20.0 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|121638277|ref|YP_978501.1| - 0.00023 21.1 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase TniB PF05621.11 gi|121638277|ref|YP_978501.1| - 0.00046 19.6 0.0 0.015 14.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial TniB protein AAA_25 PF13481.6 gi|121638277|ref|YP_978501.1| - 0.0035 17.0 1.1 0.035 13.7 0.1 2.4 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|121638277|ref|YP_978501.1| - 0.0053 17.3 0.0 0.0085 16.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|121638277|ref|YP_978501.1| - 0.0069 15.2 0.6 2.5 6.8 0.0 2.7 2 1 0 2 2 2 2 Predicted ATPase of the ABC class SbcCD_C PF13558.6 gi|121638277|ref|YP_978501.1| - 0.01 16.0 0.2 0.12 12.6 0.2 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 gi|121638277|ref|YP_978501.1| - 0.013 15.5 0.1 0.08 12.9 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA PF00004.29 gi|121638277|ref|YP_978501.1| - 0.013 15.9 0.0 0.093 13.2 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|121638277|ref|YP_978501.1| - 0.026 14.7 0.2 0.072 13.2 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|121638277|ref|YP_978501.1| - 0.033 13.9 0.0 0.1 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|121638277|ref|YP_978501.1| - 0.074 13.1 0.1 0.15 12.2 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|121638277|ref|YP_978501.1| - 0.08 12.7 0.7 0.53 10.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|121638277|ref|YP_978501.1| - 0.1 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|121638277|ref|YP_978501.1| - 0.17 11.2 0.0 16 4.7 0.0 2.2 2 0 0 2 2 2 0 KaiC BPD_transp_1 PF00528.22 gi|121638278|ref|YP_978502.1| - 1e-15 58.0 9.9 1e-15 58.0 9.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121638279|ref|YP_978503.1| - 6.6e-22 78.1 11.7 6.6e-22 78.1 11.7 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|121638280|ref|YP_978504.1| - 2.1e-33 116.0 1.8 2.5e-33 115.7 1.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|121638280|ref|YP_978504.1| - 8.4e-11 42.2 0.1 2.8e-10 40.5 0.1 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|121638280|ref|YP_978504.1| - 5.1e-06 26.1 0.0 7.8e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|121638280|ref|YP_978504.1| - 0.0025 17.0 0.0 0.0057 15.8 0.0 1.5 1 0 0 1 1 1 1 PBP superfamily domain Flavin_Reduct PF01613.18 gi|121638281|ref|YP_978505.1| - 0.084 12.9 0.0 0.095 12.7 0.0 1.2 1 1 0 1 1 1 0 Flavin reductase like domain Chondroitinas_B PF14592.6 gi|121638281|ref|YP_978505.1| - 0.095 11.6 0.0 0.1 11.4 0.0 1.2 1 0 0 1 1 1 0 Chondroitinase B Glyco_hydro_15 PF00723.21 gi|121638283|ref|YP_978507.1| - 1.5e-53 182.2 0.0 6.9e-50 170.1 0.0 2.1 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Glyco_hydro_125 PF06824.11 gi|121638283|ref|YP_978507.1| - 0.14 11.0 0.1 0.32 9.8 0.0 1.5 2 0 0 2 2 2 0 Metal-independent alpha-mannosidase (GH125) PknH_C PF14032.6 gi|121638284|ref|YP_978508.1| - 2.2e-42 145.1 3.9 2.6e-42 144.8 3.9 1.1 1 0 0 1 1 1 1 PknH-like extracellular domain GTP_EFTU PF00009.27 gi|121638285|ref|YP_978509.1| - 1.1e-51 175.2 0.0 1.6e-51 174.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 gi|121638285|ref|YP_978509.1| - 6.1e-49 164.6 1.2 1e-48 164.0 1.2 1.3 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 gi|121638285|ref|YP_978509.1| - 1.7e-21 76.1 0.1 5.1e-21 74.5 0.0 1.9 2 0 0 2 2 2 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|121638285|ref|YP_978509.1| - 8e-07 29.4 4.6 9.3e-07 29.1 1.7 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|121638285|ref|YP_978509.1| - 6.3e-05 23.0 0.0 0.00011 22.2 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 gi|121638285|ref|YP_978509.1| - 0.0005 20.1 0.0 0.0023 18.0 0.0 2.0 1 1 0 1 1 1 1 Elongation Factor G, domain II Ras PF00071.22 gi|121638285|ref|YP_978509.1| - 0.024 14.3 0.0 0.043 13.4 0.0 1.4 1 0 0 1 1 1 0 Ras family PemK_toxin PF02452.17 gi|121638286|ref|YP_978510.1| - 3.7e-09 37.0 0.0 7.1e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system CBS PF00571.28 gi|121638287|ref|YP_978511.1| - 3.5e-21 75.4 5.4 2.2e-10 40.8 1.0 2.1 2 0 0 2 2 2 2 CBS domain Lactamase_B_2 PF12706.7 gi|121638288|ref|YP_978512.1| - 9.9e-22 77.4 3.2 1.2e-21 77.1 3.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|121638288|ref|YP_978512.1| - 3.5e-12 46.7 6.7 1.2e-11 45.0 6.6 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|121638288|ref|YP_978512.1| - 0.0051 16.7 0.1 0.013 15.4 0.1 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain PE PF00934.20 gi|121638289|ref|YP_978513.1| - 1.1e-13 51.3 7.5 1.1e-13 51.3 7.5 2.3 2 0 0 2 2 2 1 PE family Transglut_core PF01841.19 gi|121638290|ref|YP_978514.1| - 2.8e-25 89.0 0.4 4.5e-25 88.3 0.4 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bact_transglu_N PF08379.10 gi|121638290|ref|YP_978514.1| - 2.7e-18 66.6 3.2 2.7e-18 66.6 3.2 1.8 2 0 0 2 2 2 1 Bacterial transglutaminase-like N-terminal region DUF553 PF04473.12 gi|121638290|ref|YP_978514.1| - 0.057 12.9 0.0 0.13 11.7 0.0 1.6 1 1 0 1 1 1 0 Transglutaminase-like domain Alpha-E PF04168.12 gi|121638291|ref|YP_978515.1| - 8.6e-76 255.5 4.8 9.7e-76 255.3 4.8 1.0 1 0 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. CP_ATPgrasp_1 PF04174.13 gi|121638292|ref|YP_978516.1| - 3.5e-164 545.6 0.2 4.6e-164 545.3 0.2 1.1 1 0 0 1 1 1 1 A circularly permuted ATPgrasp CP_ATPgrasp_2 PF14403.6 gi|121638292|ref|YP_978516.1| - 6.9e-159 528.8 0.1 8.7e-159 528.4 0.1 1.1 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 ATPgrasp_YheCD PF14398.6 gi|121638292|ref|YP_978516.1| - 0.00029 20.2 0.0 0.19 11.0 0.0 2.8 2 1 1 3 3 3 2 YheC/D like ATP-grasp GSH-S_ATP PF02955.16 gi|121638292|ref|YP_978516.1| - 0.017 14.5 0.0 0.18 11.2 0.0 2.1 2 0 0 2 2 2 0 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|121638292|ref|YP_978516.1| - 0.18 11.8 0.0 0.52 10.3 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp domain Ribosomal_S20p PF01649.18 gi|121638293|ref|YP_978517.1| - 1.1e-26 93.3 19.5 1.2e-26 93.2 19.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 DUF4878 PF12870.7 gi|121638293|ref|YP_978517.1| - 0.023 15.0 1.1 0.03 14.6 0.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4878) DUF2937 PF11157.8 gi|121638293|ref|YP_978517.1| - 0.24 11.1 2.2 0.27 10.9 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) DNA_pol3_delta PF06144.13 gi|121638294|ref|YP_978518.1| - 1.1e-07 31.8 0.0 1.5e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AA_kinase PF00696.28 gi|121638294|ref|YP_978518.1| - 0.018 14.7 0.6 0.018 14.7 0.6 1.9 2 1 0 2 2 2 0 Amino acid kinase family Competence PF03772.16 gi|121638295|ref|YP_978519.1| - 3.3e-44 151.2 37.3 3.3e-44 151.2 37.3 2.3 3 0 0 3 3 3 1 Competence protein DUF4131 PF13567.6 gi|121638295|ref|YP_978519.1| - 0.00014 21.6 1.1 0.00014 21.6 1.1 4.3 3 1 1 4 4 4 1 Domain of unknown function (DUF4131) HHH_3 PF12836.7 gi|121638296|ref|YP_978520.1| - 5.3e-21 74.6 0.0 8.4e-21 74.0 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|121638296|ref|YP_978520.1| - 6.4e-13 47.8 2.2 3e-08 33.1 0.1 3.1 3 1 0 3 3 3 2 Helix-hairpin-helix motif SLBB PF10531.9 gi|121638296|ref|YP_978520.1| - 2e-08 34.0 1.4 3.3e-08 33.2 1.4 1.4 1 0 0 1 1 1 1 SLBB domain HHH_5 PF14520.6 gi|121638296|ref|YP_978520.1| - 4.1e-05 24.1 0.0 0.048 14.3 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|121638296|ref|YP_978520.1| - 6.4e-05 23.0 0.0 0.0027 17.8 0.0 2.5 1 1 1 2 2 2 1 Helix-hairpin-helix motif Transposase_20 PF02371.16 gi|121638296|ref|YP_978520.1| - 0.00012 22.3 0.0 0.00026 21.2 0.0 1.6 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family HHH_8 PF14716.6 gi|121638296|ref|YP_978520.1| - 0.0024 18.2 0.0 0.37 11.2 0.0 2.7 1 1 1 2 2 2 1 Helix-hairpin-helix domain PsbU PF06514.11 gi|121638296|ref|YP_978520.1| - 0.0057 16.6 0.0 0.009 16.0 0.0 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_6 PF14579.6 gi|121638296|ref|YP_978520.1| - 0.0073 16.5 0.0 0.015 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif T2SSK PF03934.13 gi|121638296|ref|YP_978520.1| - 0.048 13.0 0.1 0.31 10.4 0.0 1.8 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein K IMS_HHH PF11798.8 gi|121638296|ref|YP_978520.1| - 0.17 12.3 0.0 5.4 7.6 0.0 2.8 3 0 0 3 3 3 0 IMS family HHH motif Cecropin PF00272.19 gi|121638296|ref|YP_978520.1| - 0.97 9.2 3.9 0.49 10.2 1.1 2.0 2 0 0 2 2 2 0 Cecropin family Acetyltransf_9 PF13527.7 gi|121638297|ref|YP_978521.1| - 1.4e-24 86.6 0.0 4.1e-24 85.1 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_17 PF17668.1 gi|121638297|ref|YP_978521.1| - 6.9e-17 62.3 0.3 1.6e-16 61.1 0.3 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain SCP2_2 PF13530.6 gi|121638297|ref|YP_978521.1| - 1.4e-12 47.9 0.1 2.5e-12 47.1 0.1 1.4 1 0 0 1 1 1 1 Sterol carrier protein domain FR47 PF08445.10 gi|121638297|ref|YP_978521.1| - 0.00066 19.6 0.1 0.002 18.0 0.0 1.8 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_1 PF00583.25 gi|121638297|ref|YP_978521.1| - 0.0049 17.1 0.0 0.0089 16.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121638297|ref|YP_978521.1| - 0.015 15.7 0.0 0.029 14.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DegV PF02645.16 gi|121638298|ref|YP_978522.1| - 8.5e-72 241.8 0.0 1e-71 241.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein, DegV family COG1307 Lipase_GDSL_2 PF13472.6 gi|121638299|ref|YP_978523.1| - 4e-08 33.9 0.1 9.2e-08 32.7 0.1 1.5 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 gi|121638299|ref|YP_978523.1| - 0.014 15.4 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase His_Phos_1 PF00300.22 gi|121638300|ref|YP_978524.1| - 1.3e-49 168.5 1.1 1.5e-49 168.3 1.1 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PALP PF00291.25 gi|121638300|ref|YP_978524.1| - 0.092 12.1 0.0 0.25 10.7 0.0 1.5 1 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme RsfS PF02410.15 gi|121638301|ref|YP_978525.1| - 1.5e-24 86.3 0.1 1.8e-24 86.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation NETI PF14044.6 gi|121638301|ref|YP_978525.1| - 0.036 13.8 0.1 0.062 13.0 0.1 1.3 1 0 0 1 1 1 0 NETI protein CTP_transf_like PF01467.26 gi|121638302|ref|YP_978526.1| - 1.2e-31 109.9 0.0 1.4e-31 109.6 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|121638302|ref|YP_978526.1| - 0.11 11.7 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase DUF4863 PF16155.5 gi|121638302|ref|YP_978526.1| - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) Methyltransf_25 PF13649.6 gi|121638304|ref|YP_978528.1| - 6.1e-10 39.7 0.1 2.2e-09 37.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638304|ref|YP_978528.1| - 1.2e-08 34.9 0.0 1.8e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638304|ref|YP_978528.1| - 1.5e-05 25.6 0.0 3.7e-05 24.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|121638304|ref|YP_978528.1| - 1.8e-05 24.2 0.0 2.8e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|121638304|ref|YP_978528.1| - 0.00015 21.4 0.0 0.00025 20.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|121638304|ref|YP_978528.1| - 0.00021 21.0 0.0 0.00032 20.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) DUF938 PF06080.12 gi|121638304|ref|YP_978528.1| - 0.0007 19.4 0.1 0.011 15.6 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF938) Methyltransf_31 PF13847.6 gi|121638304|ref|YP_978528.1| - 0.0035 17.2 0.0 0.0056 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638304|ref|YP_978528.1| - 0.011 16.4 0.0 0.021 15.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain SAM_MT PF04445.13 gi|121638304|ref|YP_978528.1| - 0.021 14.3 0.1 0.054 12.9 0.1 1.6 2 0 0 2 2 2 0 Putative SAM-dependent methyltransferase RrnaAD PF00398.20 gi|121638304|ref|YP_978528.1| - 0.022 13.8 0.0 0.032 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_PK PF05891.12 gi|121638304|ref|YP_978528.1| - 0.13 11.7 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Transposase_20 PF02371.16 gi|121638305|ref|YP_978529.1| - 5.4e-23 81.1 0.0 8.5e-23 80.5 0.0 1.3 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|121638306|ref|YP_978530.1| - 1.3e-06 28.3 0.0 1.6e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Transposase VWA_CoxE PF05762.14 gi|121638307|ref|YP_978531.1| - 9.1e-65 218.2 1.5 1.5e-64 217.4 1.5 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein Trigger_C PF05698.14 gi|121638307|ref|YP_978531.1| - 0.087 12.8 1.6 0.46 10.5 0.0 2.3 2 1 0 2 2 2 0 Bacterial trigger factor protein (TF) C-terminus AAA_5 PF07728.14 gi|121638308|ref|YP_978532.1| - 1.5e-11 44.5 0.2 7e-11 42.3 0.2 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|121638308|ref|YP_978532.1| - 3.1e-10 40.6 0.0 5.8e-10 39.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|121638308|ref|YP_978532.1| - 5.6e-06 26.8 1.4 2.3e-05 24.9 0.7 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 gi|121638308|ref|YP_978532.1| - 4.6e-05 23.6 0.0 8e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|121638308|ref|YP_978532.1| - 6.2e-05 23.3 0.0 0.00012 22.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_3 PF07726.11 gi|121638308|ref|YP_978532.1| - 0.00015 21.6 0.1 0.15 11.9 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121638308|ref|YP_978532.1| - 0.0013 18.5 0.1 0.68 9.7 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|121638308|ref|YP_978532.1| - 0.0016 19.0 0.0 0.0034 17.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_6 PF12774.7 gi|121638308|ref|YP_978532.1| - 0.0028 16.7 0.0 0.0043 16.1 0.0 1.2 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region Sigma54_activat PF00158.26 gi|121638308|ref|YP_978532.1| - 0.007 16.1 0.1 0.84 9.3 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain TsaE PF02367.17 gi|121638308|ref|YP_978532.1| - 0.0076 16.3 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|121638308|ref|YP_978532.1| - 0.0078 15.9 0.5 0.022 14.5 0.5 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|121638308|ref|YP_978532.1| - 0.0097 16.1 0.1 0.015 15.4 0.1 1.5 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121638308|ref|YP_978532.1| - 0.011 15.7 1.2 0.025 14.5 0.0 2.0 2 1 0 2 2 2 0 NACHT domain IPT PF01745.16 gi|121638308|ref|YP_978532.1| - 0.021 14.2 0.1 0.047 13.1 0.0 1.5 2 0 0 2 2 2 0 Isopentenyl transferase ATPase_2 PF01637.18 gi|121638308|ref|YP_978532.1| - 0.039 13.9 0.0 0.25 11.3 0.0 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TIP49 PF06068.13 gi|121638308|ref|YP_978532.1| - 0.04 13.1 0.4 0.23 10.6 0.0 2.0 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_19 PF13245.6 gi|121638308|ref|YP_978532.1| - 0.079 13.3 2.7 0.73 10.2 1.1 2.8 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|121638308|ref|YP_978532.1| - 0.13 12.0 0.3 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_14 PF13173.6 gi|121638308|ref|YP_978532.1| - 0.2 11.7 0.0 0.85 9.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain Aldedh PF00171.22 gi|121638309|ref|YP_978533.1| - 3.9e-21 75.1 10.5 1.6e-13 50.0 6.2 2.4 2 1 0 2 2 2 2 Aldehyde dehydrogenase family CHAD PF05235.14 gi|121638309|ref|YP_978533.1| - 0.05 13.6 6.4 0.022 14.7 2.5 2.0 2 0 0 2 2 2 0 CHAD domain AhpC-TSA PF00578.21 gi|121638310|ref|YP_978534.1| - 2.9e-32 111.2 0.0 4.3e-32 110.6 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121638310|ref|YP_978534.1| - 7.6e-14 51.7 0.0 8.8e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|121638310|ref|YP_978534.1| - 0.0016 18.3 0.0 0.0031 17.4 0.0 1.4 1 0 0 1 1 1 1 SCO1/SenC CMD PF02627.20 gi|121638311|ref|YP_978535.1| - 7.2e-14 51.6 0.2 7.2e-14 51.6 0.2 1.9 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family PPE PF00823.19 gi|121638312|ref|YP_978536.1| - 2.3e-50 170.8 0.1 2.8e-50 170.5 0.1 1.1 1 0 0 1 1 1 1 PPE family PE PF00934.20 gi|121638313|ref|YP_978537.1| - 3.9e-24 84.8 8.8 4.3e-24 84.6 8.8 1.0 1 0 0 1 1 1 1 PE family EspB_PE PF18625.1 gi|121638313|ref|YP_978537.1| - 0.033 14.7 5.6 0.03 14.8 4.7 1.4 1 1 0 1 1 1 0 ESX-1 secreted protein B PE domain T7SS_ESX_EspC PF10824.8 gi|121638313|ref|YP_978537.1| - 0.036 14.5 3.0 0.046 14.2 3.0 1.2 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm MS_channel PF00924.18 gi|121638316|ref|YP_978540.1| - 5.4e-41 140.4 0.0 9.5e-41 139.6 0.0 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel cNMP_binding PF00027.29 gi|121638316|ref|YP_978540.1| - 9.5e-14 51.2 0.1 1.6e-13 50.5 0.1 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4491 PF14898.6 gi|121638316|ref|YP_978540.1| - 1.5 9.3 6.7 3 8.3 5.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4491) Guanylate_cyc PF00211.20 gi|121638317|ref|YP_978541.1| - 1.1e-36 126.1 0.0 5e-35 120.8 0.0 2.2 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|121638317|ref|YP_978541.1| - 3.2e-18 65.9 0.1 1.4e-17 63.8 0.1 2.2 1 0 0 1 1 1 1 HAMP domain HNOBA PF07701.14 gi|121638317|ref|YP_978541.1| - 0.0031 17.0 0.3 0.0052 16.3 0.3 1.3 1 0 0 1 1 1 1 Heme NO binding associated DUF4307 PF14155.6 gi|121638317|ref|YP_978541.1| - 0.27 11.1 1.8 6.6 6.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) PfkB PF00294.24 gi|121638318|ref|YP_978542.1| - 1.3e-54 185.6 5.4 1.7e-53 181.9 5.4 1.9 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Transglut_core3 PF13471.6 gi|121638318|ref|YP_978542.1| - 0.45 10.4 5.0 0.74 9.7 0.6 2.5 2 0 0 2 2 2 0 Transglutaminase-like superfamily PEMT PF04191.13 gi|121638319|ref|YP_978543.1| - 1.4e-11 44.7 0.4 1.7e-11 44.4 0.4 1.1 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 gi|121638319|ref|YP_978543.1| - 4.4e-11 43.0 0.1 6e-11 42.6 0.1 1.2 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF1295 PF06966.12 gi|121638319|ref|YP_978543.1| - 0.0013 18.3 0.1 0.0014 18.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) NnrU PF07298.11 gi|121638319|ref|YP_978543.1| - 0.014 14.9 0.8 0.016 14.7 0.8 1.2 1 0 0 1 1 1 0 NnrU protein DUF2627 PF11118.8 gi|121638319|ref|YP_978543.1| - 0.056 14.0 1.1 0.13 12.9 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) NAD_synthase PF02540.17 gi|121638320|ref|YP_978544.1| - 3.5e-23 82.0 0.0 4.9e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 NAD synthase CN_hydrolase PF00795.22 gi|121638320|ref|YP_978544.1| - 2.1e-16 60.1 0.0 3.1e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase AA_kinase PF00696.28 gi|121638322|ref|YP_978546.1| - 5.1e-37 127.7 3.5 9.5e-37 126.9 3.5 1.4 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 gi|121638322|ref|YP_978546.1| - 4e-16 58.7 3.2 8e-16 57.8 0.3 2.7 3 0 0 3 3 3 1 PUA domain GTP1_OBG PF01018.22 gi|121638323|ref|YP_978547.1| - 1.9e-51 173.7 5.7 2.7e-51 173.2 5.7 1.2 1 0 0 1 1 1 1 GTP1/OBG DUF1967 PF09269.11 gi|121638323|ref|YP_978547.1| - 6.7e-25 86.8 0.0 1e-24 86.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1967) MMR_HSR1 PF01926.23 gi|121638323|ref|YP_978547.1| - 1.4e-21 76.7 0.0 2.6e-21 75.8 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|121638323|ref|YP_978547.1| - 1.6e-07 31.0 0.0 4.6e-07 29.5 0.0 1.7 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|121638323|ref|YP_978547.1| - 0.0027 17.6 0.0 0.11 12.5 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase Arf PF00025.21 gi|121638323|ref|YP_978547.1| - 0.035 13.6 0.0 0.17 11.3 0.0 2.0 1 1 0 1 1 1 0 ADP-ribosylation factor family Ribosomal_L27 PF01016.19 gi|121638324|ref|YP_978548.1| - 2e-35 120.6 4.7 2.3e-35 120.5 4.7 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein Ribosomal_L21p PF00829.21 gi|121638325|ref|YP_978549.1| - 5.3e-33 113.3 6.2 6.3e-33 113.0 6.2 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein SDF PF00375.18 gi|121638326|ref|YP_978550.1| - 7.8e-96 321.4 36.8 8.9e-96 321.3 36.8 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family RNase_E_G PF10150.9 gi|121638327|ref|YP_978551.1| - 6.9e-101 337.2 0.3 9e-101 336.8 0.3 1.1 1 0 0 1 1 1 1 Ribonuclease E/G family IF2_N PF04760.15 gi|121638327|ref|YP_978551.1| - 0.00027 20.7 0.0 0.00077 19.2 0.0 1.8 1 0 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region S1 PF00575.23 gi|121638327|ref|YP_978551.1| - 0.00052 20.3 0.0 0.0011 19.2 0.0 1.6 1 0 0 1 1 1 1 S1 RNA binding domain PCB_OB PF17092.5 gi|121638327|ref|YP_978551.1| - 0.0084 16.9 0.1 0.032 15.0 0.1 2.0 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain Anti-TRAP PF15777.5 gi|121638327|ref|YP_978551.1| - 0.17 11.8 0.0 0.5 10.4 0.0 1.8 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein NDK PF00334.19 gi|121638328|ref|YP_978552.1| - 8.7e-54 181.2 0.0 9.6e-54 181.1 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase TruB_C PF09142.11 gi|121638328|ref|YP_978552.1| - 0.0073 16.1 0.5 0.014 15.1 0.5 1.5 1 0 0 1 1 1 1 tRNA Pseudouridine synthase II, C terminal DUF4233 PF14017.6 gi|121638329|ref|YP_978553.1| - 4.1e-27 94.6 10.5 5e-27 94.3 10.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4233) Mur_ligase_M PF08245.12 gi|121638330|ref|YP_978554.1| - 4.6e-16 59.4 0.0 1e-15 58.3 0.0 1.6 1 1 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|121638330|ref|YP_978554.1| - 1.5e-11 44.4 0.4 3.9e-11 43.1 0.0 1.8 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain tRNA-synt_1 PF00133.22 gi|121638331|ref|YP_978555.1| - 1.3e-198 661.1 0.1 6.6e-149 496.9 0.0 2.9 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|121638331|ref|YP_978555.1| - 1.5e-36 125.7 0.0 2.6e-36 124.9 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|121638331|ref|YP_978555.1| - 2.6e-19 69.3 0.0 1.2e-06 27.6 0.0 4.1 4 0 0 4 4 4 3 tRNA synthetases class I (M) Val_tRNA-synt_C PF10458.9 gi|121638331|ref|YP_978555.1| - 1.7e-16 60.3 5.0 3.4e-16 59.3 5.0 1.6 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 gi|121638331|ref|YP_978555.1| - 2e-07 30.7 0.1 8.5e-06 25.4 0.0 2.3 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|121638331|ref|YP_978555.1| - 5.7e-05 22.2 0.0 0.0001 21.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|121638331|ref|YP_978555.1| - 0.0003 20.2 0.0 0.33 10.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain EXS PF03124.14 gi|121638331|ref|YP_978555.1| - 0.028 13.8 0.0 0.047 13.0 0.0 1.3 1 0 0 1 1 1 0 EXS family ABC_tran_CTD PF16326.5 gi|121638331|ref|YP_978555.1| - 0.077 13.2 2.6 0.32 11.3 2.6 2.0 2 0 0 2 2 2 0 ABC transporter C-terminal domain Tropomyosin_1 PF12718.7 gi|121638331|ref|YP_978555.1| - 0.19 11.9 0.7 0.34 11.1 0.7 1.4 1 0 0 1 1 1 0 Tropomyosin like Sacchrp_dh_NADP PF03435.18 gi|121638332|ref|YP_978556.1| - 3.6e-13 49.9 0.1 6.7e-13 49.0 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain KR PF08659.10 gi|121638332|ref|YP_978556.1| - 0.0039 17.1 0.5 0.012 15.5 0.3 1.8 2 0 0 2 2 2 1 KR domain NAD_binding_10 PF13460.6 gi|121638332|ref|YP_978556.1| - 0.0048 16.8 0.2 0.0078 16.1 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|121638332|ref|YP_978556.1| - 0.13 11.7 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Transglycosylas PF06737.14 gi|121638333|ref|YP_978557.1| - 8.1e-35 119.3 6.3 1.2e-34 118.8 6.3 1.3 1 0 0 1 1 1 1 Transglycosylase-like domain NTP_transf_3 PF12804.7 gi|121638336|ref|YP_978560.1| - 1.8e-28 99.9 4.0 2.3e-28 99.6 4.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain TPP_enzyme_C PF02775.21 gi|121638337|ref|YP_978561.1| - 1.7e-30 105.8 0.0 2.8e-30 105.1 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|121638338|ref|YP_978562.1| - 2.8e-60 203.9 0.0 4e-60 203.5 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|121638338|ref|YP_978562.1| - 2.2e-25 89.7 0.1 3.4e-25 89.1 0.1 1.3 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|121638338|ref|YP_978562.1| - 2.5e-08 34.2 0.0 4.8e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|121638338|ref|YP_978562.1| - 0.00035 20.2 0.0 0.00074 19.2 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MFS_1 PF07690.16 gi|121638339|ref|YP_978563.1| - 2.2e-33 115.7 42.4 3.6e-21 75.5 21.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|121638339|ref|YP_978563.1| - 4.8e-11 42.1 11.0 5.6e-10 38.6 11.0 2.0 1 1 0 1 1 1 1 MFS_1 like family AAA_2 PF07724.14 gi|121638340|ref|YP_978564.1| - 6.4e-50 169.6 0.0 1e-49 168.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) zf-C4_ClpX PF06689.13 gi|121638340|ref|YP_978564.1| - 9.1e-21 73.5 6.0 1.9e-20 72.4 6.0 1.6 1 0 0 1 1 1 1 ClpX C4-type zinc finger AAA PF00004.29 gi|121638340|ref|YP_978564.1| - 1.5e-17 64.3 0.1 5e-17 62.6 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 gi|121638340|ref|YP_978564.1| - 2.4e-17 62.8 0.1 6.6e-17 61.3 0.1 1.8 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 gi|121638340|ref|YP_978564.1| - 3.6e-07 30.3 0.0 3.3e-06 27.2 0.1 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|121638340|ref|YP_978564.1| - 8.8e-06 25.2 0.0 0.0026 17.2 0.0 3.1 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 gi|121638340|ref|YP_978564.1| - 2.8e-05 23.9 0.2 0.00018 21.3 0.2 2.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|121638340|ref|YP_978564.1| - 7.7e-05 23.0 0.1 0.00063 20.0 0.1 2.4 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|121638340|ref|YP_978564.1| - 0.00052 19.8 0.0 0.041 13.6 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_14 PF13173.6 gi|121638340|ref|YP_978564.1| - 0.00052 20.0 0.1 0.0015 18.6 0.0 1.8 2 0 0 2 2 1 1 AAA domain MCM PF00493.23 gi|121638340|ref|YP_978564.1| - 0.00055 19.1 0.0 0.00094 18.3 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain IstB_IS21 PF01695.17 gi|121638340|ref|YP_978564.1| - 0.0014 18.4 0.0 0.0027 17.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|121638340|ref|YP_978564.1| - 0.0039 17.7 0.0 0.0083 16.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|121638340|ref|YP_978564.1| - 0.013 15.0 0.0 0.022 14.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|121638340|ref|YP_978564.1| - 0.014 15.8 0.0 0.03 14.7 0.0 1.7 1 1 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.6 gi|121638340|ref|YP_978564.1| - 0.015 15.4 0.0 0.037 14.1 0.0 1.6 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_33 PF13671.6 gi|121638340|ref|YP_978564.1| - 0.016 15.4 0.0 0.045 13.9 0.0 1.8 2 0 0 2 2 1 0 AAA domain B12-binding_2 PF02607.17 gi|121638340|ref|YP_978564.1| - 0.018 15.4 1.5 0.042 14.3 0.0 2.4 3 0 0 3 3 1 0 B12 binding domain Rad17 PF03215.15 gi|121638340|ref|YP_978564.1| - 0.02 14.8 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain PhoH PF02562.16 gi|121638340|ref|YP_978564.1| - 0.021 14.3 0.0 0.044 13.2 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein NACHT PF05729.12 gi|121638340|ref|YP_978564.1| - 0.028 14.4 0.0 0.079 12.9 0.0 1.8 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 gi|121638340|ref|YP_978564.1| - 0.029 14.7 0.1 0.15 12.4 0.1 2.2 1 1 0 1 1 1 0 AAA ATPase domain PduV-EutP PF10662.9 gi|121638340|ref|YP_978564.1| - 0.03 14.1 0.0 0.069 12.9 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation TsaE PF02367.17 gi|121638340|ref|YP_978564.1| - 0.04 13.9 0.0 0.074 13.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|121638340|ref|YP_978564.1| - 0.045 13.5 0.0 0.075 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|121638340|ref|YP_978564.1| - 0.055 14.0 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 ABC transporter T2SSE PF00437.20 gi|121638340|ref|YP_978564.1| - 0.057 12.5 0.0 0.092 11.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein TIP49 PF06068.13 gi|121638340|ref|YP_978564.1| - 0.058 12.6 0.1 0.13 11.5 0.1 1.5 1 1 0 1 1 1 0 TIP49 P-loop domain AAA_3 PF07726.11 gi|121638340|ref|YP_978564.1| - 0.11 12.4 0.5 1.5 8.7 0.1 3.0 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 gi|121638340|ref|YP_978564.1| - 0.16 12.1 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Shikimate kinase Viral_helicase1 PF01443.18 gi|121638340|ref|YP_978564.1| - 0.16 11.7 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase S-methyl_trans PF02574.16 gi|121638341|ref|YP_978565.1| - 1e-74 251.8 0.0 1.1e-74 251.6 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase AlaDh_PNT_N PF05222.15 gi|121638341|ref|YP_978565.1| - 0.18 12.1 0.1 2.8 8.2 0.0 2.4 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, N-terminal domain MFS_1 PF07690.16 gi|121638342|ref|YP_978566.1| - 1e-48 166.1 40.3 1e-48 166.1 40.3 2.0 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|121638342|ref|YP_978566.1| - 9.8e-08 31.3 28.5 1.9e-06 27.1 14.0 3.1 2 2 0 2 2 2 2 Sugar (and other) transporter DUF3007 PF11460.8 gi|121638342|ref|YP_978566.1| - 0.063 13.5 0.2 0.063 13.5 0.2 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3007) OATP PF03137.20 gi|121638342|ref|YP_978566.1| - 8.8 4.5 21.1 0.017 13.5 1.3 3.5 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family CLP_protease PF00574.23 gi|121638343|ref|YP_978567.1| - 3.3e-74 248.7 0.1 4.1e-74 248.4 0.1 1.1 1 0 0 1 1 1 1 Clp protease CLP_protease PF00574.23 gi|121638344|ref|YP_978568.1| - 3.6e-74 248.6 0.1 4.2e-74 248.4 0.1 1.0 1 0 0 1 1 1 1 Clp protease Trigger_C PF05698.14 gi|121638345|ref|YP_978569.1| - 7.4e-40 136.6 5.9 1.8e-39 135.3 4.7 2.2 3 0 0 3 3 3 1 Bacterial trigger factor protein (TF) C-terminus Trigger_N PF05697.13 gi|121638345|ref|YP_978569.1| - 7.4e-39 133.3 0.0 2.7e-38 131.5 0.0 2.0 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) FKBP_C PF00254.28 gi|121638345|ref|YP_978569.1| - 0.00011 22.5 0.0 0.0003 21.0 0.0 1.7 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase CM_2 PF01817.21 gi|121638345|ref|YP_978569.1| - 0.024 15.0 0.1 0.11 12.9 0.1 2.1 1 0 0 1 1 1 0 Chorismate mutase type II Beta-lactamase PF00144.24 gi|121638346|ref|YP_978570.1| - 2.6e-72 243.9 2.6 3.1e-72 243.6 2.6 1.0 1 0 0 1 1 1 1 Beta-lactamase H2TH PF06831.14 gi|121638347|ref|YP_978571.1| - 3e-27 94.4 0.0 4.8e-27 93.8 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 gi|121638347|ref|YP_978571.1| - 2.8e-07 30.3 2.9 5.9e-07 29.2 2.9 1.6 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS Fapy_DNA_glyco PF01149.24 gi|121638347|ref|YP_978571.1| - 4.8e-06 27.2 0.0 1.3e-05 25.8 0.0 1.7 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain DUF3328 PF11807.8 gi|121638347|ref|YP_978571.1| - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) LacAB_rpiB PF02502.18 gi|121638348|ref|YP_978572.1| - 3.2e-43 147.0 0.0 3.6e-43 146.9 0.0 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase PhnG PF06754.12 gi|121638348|ref|YP_978572.1| - 0.023 14.6 0.2 0.035 14.1 0.2 1.3 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG DSBA PF01323.20 gi|121638349|ref|YP_978573.1| - 5.9e-13 49.0 2.8 8.8e-12 45.2 2.8 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Peptidase_M1 PF01433.20 gi|121638350|ref|YP_978574.1| - 1.5e-58 197.9 0.7 2.2e-58 197.4 0.7 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 gi|121638350|ref|YP_978574.1| - 1.5e-56 192.2 0.0 2.4e-56 191.6 0.0 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Peptidase_M1_N PF17900.1 gi|121638350|ref|YP_978574.1| - 8.6e-18 65.2 0.0 1.6e-17 64.3 0.0 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain DUF5130 PF17174.4 gi|121638351|ref|YP_978575.1| - 7.7e-65 217.2 0.1 9e-65 217.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5130) TPM_phosphatase PF04536.14 gi|121638351|ref|YP_978575.1| - 0.21 11.8 0.0 0.31 11.2 0.0 1.2 1 0 0 1 1 1 0 TPM domain HNH_5 PF14279.6 gi|121638352|ref|YP_978576.1| - 1.6e-13 50.3 1.4 2.8e-13 49.5 1.4 1.3 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 gi|121638352|ref|YP_978576.1| - 1.1e-11 44.7 3.9 2e-11 43.9 3.9 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_4 PF13395.6 gi|121638352|ref|YP_978576.1| - 6e-07 29.3 0.1 2e-06 27.6 0.1 1.9 1 1 0 1 1 1 1 HNH endonuclease Cys_rich_CPXG PF14255.6 gi|121638352|ref|YP_978576.1| - 0.082 12.8 6.3 0.15 12.0 6.3 1.4 1 0 0 1 1 1 0 Cysteine-rich CPXCG Bac_globin PF01152.21 gi|121638353|ref|YP_978577.1| - 3e-42 143.6 0.0 3.3e-42 143.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial-like globin Protoglobin PF11563.8 gi|121638353|ref|YP_978577.1| - 0.036 14.0 0.0 0.097 12.6 0.0 1.6 1 1 0 2 2 2 0 Protoglobin Alpha-amylase PF00128.24 gi|121638354|ref|YP_978578.1| - 5.3e-80 269.5 0.0 8.4e-80 268.8 0.0 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 gi|121638354|ref|YP_978578.1| - 0.12 11.5 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain DUF4381 PF14316.6 gi|121638356|ref|YP_978580.1| - 0.0023 18.2 0.3 0.0074 16.5 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4381) 4HBT_2 PF13279.6 gi|121638358|ref|YP_978582.1| - 2.2e-09 37.8 0.1 2.4e-09 37.7 0.1 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|121638358|ref|YP_978582.1| - 0.00017 21.0 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Acyl-ACP thioesterase 4HBT PF03061.22 gi|121638358|ref|YP_978582.1| - 0.00084 19.6 0.1 0.0013 19.0 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily Bac_GDH PF05088.12 gi|121638359|ref|YP_978583.1| - 0 1775.9 0.0 0 1775.5 0.0 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase ELFV_dehydrog PF00208.21 gi|121638359|ref|YP_978583.1| - 0.066 12.9 0.3 0.58 9.8 0.3 2.1 1 1 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PIN_3 PF13470.6 gi|121638359|ref|YP_978583.1| - 0.1 13.4 0.1 22 5.8 0.1 3.0 2 0 0 2 2 2 0 PIN domain ABC_tran PF00005.27 gi|121638360|ref|YP_978584.1| - 6e-51 172.5 0.0 3.7e-27 95.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|121638360|ref|YP_978584.1| - 4.1e-17 62.9 6.4 0.00018 21.4 0.0 4.2 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 gi|121638360|ref|YP_978584.1| - 9.1e-15 54.5 8.3 1.1e-13 51.0 6.6 2.3 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|121638360|ref|YP_978584.1| - 5.9e-09 35.7 2.3 0.3 10.5 0.0 4.2 3 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|121638360|ref|YP_978584.1| - 2.4e-05 24.9 6.3 0.01 16.3 0.2 2.9 3 0 0 3 3 3 2 AAA domain AAA_29 PF13555.6 gi|121638360|ref|YP_978584.1| - 4.8e-05 23.0 0.4 0.16 11.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|121638360|ref|YP_978584.1| - 0.00011 22.3 0.8 0.14 12.3 0.1 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase Dynamin_N PF00350.23 gi|121638360|ref|YP_978584.1| - 0.00027 21.0 0.0 0.018 15.1 0.0 2.4 2 0 0 2 2 2 1 Dynamin family AAA_22 PF13401.6 gi|121638360|ref|YP_978584.1| - 0.00059 20.1 0.6 0.3 11.4 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|121638360|ref|YP_978584.1| - 0.001 18.8 0.5 0.85 9.3 0.2 2.4 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 gi|121638360|ref|YP_978584.1| - 0.0013 18.7 0.3 0.24 11.3 0.1 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 gi|121638360|ref|YP_978584.1| - 0.0017 18.2 0.1 1 9.0 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.6 gi|121638360|ref|YP_978584.1| - 0.0022 18.2 0.1 8.8 6.6 0.0 4.0 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 gi|121638360|ref|YP_978584.1| - 0.0046 17.5 1.3 2.4 8.7 0.1 3.2 2 1 0 2 2 2 1 AAA domain Roc PF08477.13 gi|121638360|ref|YP_978584.1| - 0.0053 17.0 1.0 0.89 9.8 0.0 2.9 3 0 0 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase AAA_27 PF13514.6 gi|121638360|ref|YP_978584.1| - 0.0061 16.2 2.6 0.89 9.1 0.0 2.6 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.22 gi|121638360|ref|YP_978584.1| - 0.0064 15.7 1.2 0.061 12.5 0.0 2.8 3 0 0 3 3 3 1 NB-ARC domain AAA PF00004.29 gi|121638360|ref|YP_978584.1| - 0.0073 16.7 1.0 0.45 10.9 0.1 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|121638360|ref|YP_978584.1| - 0.019 14.9 0.2 0.4 10.5 0.0 2.6 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea DLIC PF05783.11 gi|121638360|ref|YP_978584.1| - 0.047 12.5 0.2 0.27 10.0 0.1 2.0 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) cobW PF02492.19 gi|121638360|ref|YP_978584.1| - 0.048 13.3 0.7 2.1 7.9 0.1 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|121638360|ref|YP_978584.1| - 0.051 13.7 2.2 2.2 8.4 0.0 2.8 3 0 0 3 3 2 0 AAA domain AAA_30 PF13604.6 gi|121638360|ref|YP_978584.1| - 0.052 13.3 1.6 5.6 6.6 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|121638360|ref|YP_978584.1| - 0.062 13.3 0.1 0.84 9.7 0.1 2.8 3 0 0 3 3 3 0 AAA domain NACHT PF05729.12 gi|121638360|ref|YP_978584.1| - 0.097 12.6 0.6 1.4 8.8 0.1 2.3 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.15 gi|121638360|ref|YP_978584.1| - 0.1 12.5 1.6 2 8.3 0.5 3.3 3 1 1 4 4 4 0 NTPase PRK PF00485.18 gi|121638360|ref|YP_978584.1| - 0.13 12.0 0.2 13 5.4 0.0 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_13 PF13166.6 gi|121638360|ref|YP_978584.1| - 0.15 10.7 0.1 25 3.3 0.0 3.2 4 0 0 4 4 4 0 AAA domain AAA_16 PF13191.6 gi|121638360|ref|YP_978584.1| - 0.16 12.4 11.8 0.89 9.9 0.1 3.6 1 1 2 3 3 3 0 AAA ATPase domain RNA_helicase PF00910.22 gi|121638360|ref|YP_978584.1| - 0.18 12.2 0.1 11 6.4 0.0 2.3 2 0 0 2 2 2 0 RNA helicase SSB PF00436.25 gi|121638361|ref|YP_978585.1| - 4.4e-15 55.6 0.0 5.5e-15 55.3 0.0 1.1 1 0 0 1 1 1 1 Single-strand binding protein family Acyltransferase PF01553.21 gi|121638363|ref|YP_978587.1| - 2e-14 53.4 0.0 4.1e-14 52.3 0.0 1.5 1 0 0 1 1 1 1 Acyltransferase HAD PF12710.7 gi|121638364|ref|YP_978588.1| - 2.7e-31 109.5 0.2 6.5e-31 108.2 0.2 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Acyltransferase PF01553.21 gi|121638364|ref|YP_978588.1| - 6.3e-28 97.1 0.0 1e-27 96.4 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase Hydrolase_3 PF08282.12 gi|121638364|ref|YP_978588.1| - 0.061 13.0 0.6 15 5.2 0.0 3.2 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase WES_acyltransf PF03007.16 gi|121638365|ref|YP_978589.1| - 4.5e-85 285.6 0.4 6.5e-85 285.1 0.4 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121638365|ref|YP_978589.1| - 3.7e-12 46.4 0.0 5.6e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Abhydrolase_3 PF07859.13 gi|121638366|ref|YP_978590.1| - 1.6e-21 77.1 0.6 2.4e-21 76.6 0.6 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121638366|ref|YP_978590.1| - 1.1e-13 51.2 0.7 8.1e-13 48.3 0.7 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family COesterase PF00135.28 gi|121638366|ref|YP_978590.1| - 2.4e-12 46.5 0.0 1.2e-11 44.2 0.0 1.9 1 1 0 1 1 1 1 Carboxylesterase family DLH PF01738.18 gi|121638366|ref|YP_978590.1| - 0.00012 21.7 0.3 0.00059 19.5 0.3 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|121638366|ref|YP_978590.1| - 0.0026 17.1 0.1 0.051 12.8 0.0 2.2 1 1 1 2 2 2 1 Serine aminopeptidase, S33 FSH1 PF03959.13 gi|121638366|ref|YP_978590.1| - 0.0086 15.7 0.0 0.029 14.1 0.0 1.8 2 1 0 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 gi|121638366|ref|YP_978590.1| - 0.033 14.3 0.0 0.083 13.0 0.0 1.7 1 0 0 1 1 1 0 TAP-like protein BAAT_C PF08840.11 gi|121638366|ref|YP_978590.1| - 0.033 14.1 0.0 0.09 12.7 0.0 1.6 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_2 PF02230.16 gi|121638366|ref|YP_978590.1| - 0.036 13.9 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase LIP PF03583.14 gi|121638366|ref|YP_978590.1| - 0.042 13.2 0.0 0.14 11.5 0.0 1.9 1 1 1 2 2 2 0 Secretory lipase Abhydrolase_1 PF00561.20 gi|121638366|ref|YP_978590.1| - 0.043 13.5 0.0 4.4 6.9 0.0 2.5 3 0 0 3 3 3 0 alpha/beta hydrolase fold Alliinase_C PF04864.13 gi|121638366|ref|YP_978590.1| - 0.074 11.9 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Allinase ECH_1 PF00378.20 gi|121638367|ref|YP_978591.1| - 4.2e-47 160.6 0.3 4.9e-47 160.4 0.3 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121638367|ref|YP_978591.1| - 1.3e-26 93.9 0.2 1.5e-26 93.7 0.2 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PE PF00934.20 gi|121638368|ref|YP_978592.1| - 6.4e-34 116.2 21.3 6.4e-34 116.2 21.3 2.6 2 0 0 2 2 2 1 PE family GerE PF00196.19 gi|121638369|ref|YP_978593.1| - 8.3e-16 57.3 0.0 1.6e-15 56.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family NB-ARC PF00931.22 gi|121638369|ref|YP_978593.1| - 6.3e-07 28.8 0.0 1.4e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain AAA_16 PF13191.6 gi|121638369|ref|YP_978593.1| - 0.00016 22.1 0.8 0.00016 22.1 0.8 3.8 3 2 0 3 3 3 1 AAA ATPase domain NACHT PF05729.12 gi|121638369|ref|YP_978593.1| - 0.00033 20.6 0.0 0.0044 16.9 0.0 2.2 2 0 0 2 2 2 1 NACHT domain Sigma70_r4_2 PF08281.12 gi|121638369|ref|YP_978593.1| - 0.0017 18.0 0.0 0.0042 16.7 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 AAA_25 PF13481.6 gi|121638369|ref|YP_978593.1| - 0.0023 17.6 6.0 0.0088 15.6 0.5 3.2 2 1 0 3 3 3 1 AAA domain Guanylate_cyc PF00211.20 gi|121638369|ref|YP_978593.1| - 0.008 15.8 0.0 0.066 12.8 0.0 2.2 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain AAA_22 PF13401.6 gi|121638369|ref|YP_978593.1| - 0.012 15.9 0.0 0.032 14.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain HTH_24 PF13412.6 gi|121638369|ref|YP_978593.1| - 0.059 12.9 0.0 0.27 10.8 0.0 2.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding ArsA_ATPase PF02374.15 gi|121638369|ref|YP_978593.1| - 0.28 10.3 0.0 0.44 9.7 0.0 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase PE PF00934.20 gi|121638372|ref|YP_978596.1| - 8.8e-35 118.9 18.6 1.5e-34 118.2 18.6 1.4 1 0 0 1 1 1 1 PE family LDcluster4 PF18306.1 gi|121638373|ref|YP_978597.1| - 2.6e-37 127.8 0.3 2.9e-37 127.7 0.3 1.1 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|121638373|ref|YP_978597.1| - 0.00042 19.6 1.2 0.00096 18.5 0.3 1.8 1 1 0 2 2 2 1 DNA recombination-mediator protein A LSDAT_prok PF18171.1 gi|121638373|ref|YP_978597.1| - 0.073 12.3 0.3 0.32 10.2 0.0 1.8 1 1 0 2 2 2 0 SLOG in TRPM, prokaryote Thymidylat_synt PF00303.19 gi|121638374|ref|YP_978598.1| - 0.00012 21.3 0.0 0.00023 20.4 0.0 1.3 1 1 0 1 1 1 1 Thymidylate synthase VapB_antitoxin PF09957.9 gi|121638375|ref|YP_978599.1| - 0.00056 19.8 0.6 0.0016 18.4 0.3 1.8 2 0 0 2 2 2 1 Bacterial antitoxin of type II TA system, VapB RHH_5 PF07878.11 gi|121638375|ref|YP_978599.1| - 0.079 12.9 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 RHH_1 PF01402.21 gi|121638375|ref|YP_978599.1| - 0.13 12.3 2.8 2 8.5 1.9 2.3 2 1 0 2 2 2 0 Ribbon-helix-helix protein, copG family PIN PF01850.21 gi|121638376|ref|YP_978600.1| - 1.2e-06 29.0 0.1 1.6e-06 28.6 0.1 1.2 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121638376|ref|YP_978600.1| - 0.03 14.1 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) 2-oxoacid_dh PF00198.23 gi|121638377|ref|YP_978601.1| - 2.1e-66 223.7 0.0 3.1e-66 223.2 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|121638377|ref|YP_978601.1| - 7.8e-18 64.1 0.1 1.6e-17 63.1 0.1 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 gi|121638377|ref|YP_978601.1| - 1.2e-11 44.7 1.1 2.9e-11 43.5 1.1 1.7 1 0 0 1 1 1 1 e3 binding domain GCV_H PF01597.19 gi|121638377|ref|YP_978601.1| - 0.011 15.6 0.1 0.02 14.8 0.1 1.3 1 0 0 1 1 1 0 Glycine cleavage H-protein Biotin_lipoyl_2 PF13533.6 gi|121638377|ref|YP_978601.1| - 0.071 13.0 0.1 0.33 10.8 0.0 2.1 1 1 1 2 2 2 0 Biotin-lipoyl like Ribosomal_L13 PF00572.18 gi|121638377|ref|YP_978601.1| - 0.2 11.9 0.0 0.37 11.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L13 Transket_pyr PF02779.24 gi|121638378|ref|YP_978602.1| - 2.3e-40 138.1 0.0 3.7e-40 137.5 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|121638378|ref|YP_978602.1| - 6.4e-36 123.0 0.0 8.7e-35 119.3 0.0 2.1 2 0 0 2 2 2 1 Transketolase, C-terminal domain E1_dh PF00676.20 gi|121638379|ref|YP_978603.1| - 7.4e-85 284.5 0.0 9.2e-85 284.2 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|121638379|ref|YP_978603.1| - 4.6e-06 26.0 0.0 1.6e-05 24.3 0.0 1.6 1 1 1 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 gi|121638379|ref|YP_978603.1| - 2e-05 24.4 0.7 0.00022 21.0 0.7 2.1 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.21 gi|121638379|ref|YP_978603.1| - 0.004 16.2 0.0 0.0059 15.6 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain HpcH_HpaI PF03328.14 gi|121638380|ref|YP_978604.1| - 4.3e-30 104.5 6.3 2.3e-28 98.9 6.3 2.2 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|121638380|ref|YP_978604.1| - 4.5e-10 39.2 0.0 3.9e-07 29.6 0.0 2.2 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold Zds_C PF08632.10 gi|121638380|ref|YP_978604.1| - 0.063 13.0 0.0 0.16 11.8 0.0 1.6 2 0 0 2 2 2 0 Activator of mitotic machinery Cdc14 phosphatase activation C-term MaoC_dehydratas PF01575.19 gi|121638381|ref|YP_978605.1| - 1.4e-28 99.0 0.0 1.9e-28 98.5 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121638381|ref|YP_978605.1| - 0.0028 17.8 0.0 0.0048 17.0 0.0 1.4 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Acyl-CoA_dh_1 PF00441.24 gi|121638382|ref|YP_978606.1| - 2e-47 161.1 2.7 2.9e-47 160.6 2.7 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121638382|ref|YP_978606.1| - 3e-36 124.5 0.0 6.1e-36 123.5 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121638382|ref|YP_978606.1| - 5.4e-22 77.8 0.4 1e-21 76.9 0.4 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121638382|ref|YP_978606.1| - 1.4e-18 67.4 2.7 2.6e-18 66.6 2.7 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain CPSase_L_D2 PF02786.17 gi|121638383|ref|YP_978607.1| - 3.4e-82 275.0 0.0 5.8e-82 274.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|121638383|ref|YP_978607.1| - 6.9e-43 145.7 0.1 2e-42 144.2 0.1 1.8 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|121638383|ref|YP_978607.1| - 2.2e-33 114.6 0.0 6.3e-33 113.1 0.0 1.8 2 0 0 2 2 1 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 gi|121638383|ref|YP_978607.1| - 2.1e-15 56.3 5.9 5.6e-15 54.9 5.9 1.8 1 0 0 1 1 1 1 Biotin-requiring enzyme Dala_Dala_lig_C PF07478.13 gi|121638383|ref|YP_978607.1| - 1.4e-08 34.5 0.0 4.5e-08 32.9 0.0 1.8 2 1 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|121638383|ref|YP_978607.1| - 7.3e-06 25.7 0.0 1.8e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 gi|121638383|ref|YP_978607.1| - 0.00011 21.9 8.1 0.026 14.4 1.6 2.7 1 1 1 2 2 2 2 Biotin-lipoyl like ATP-grasp_3 PF02655.14 gi|121638383|ref|YP_978607.1| - 0.0069 16.4 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain DUF3182 PF11379.8 gi|121638383|ref|YP_978607.1| - 0.034 13.1 0.0 1.6 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3182) LAL_C2 PF18603.1 gi|121638383|ref|YP_978607.1| - 0.074 13.2 2.9 0.35 11.0 0.3 3.2 3 0 0 3 3 3 0 L-amino acid ligase C-terminal domain 2 PASTA PF03793.19 gi|121638383|ref|YP_978607.1| - 0.077 12.9 0.1 0.43 10.5 0.1 2.2 2 0 0 2 2 2 0 PASTA domain GCV_H PF01597.19 gi|121638383|ref|YP_978607.1| - 0.096 12.6 0.8 0.19 11.6 0.8 1.5 1 0 0 1 1 1 0 Glycine cleavage H-protein Peptidase_M23 PF01551.22 gi|121638383|ref|YP_978607.1| - 0.098 12.9 1.5 0.47 10.7 0.9 2.4 3 0 0 3 3 3 0 Peptidase family M23 RnfC_N PF13375.6 gi|121638383|ref|YP_978607.1| - 5 7.1 7.9 14 5.7 0.4 3.3 2 1 1 3 3 3 0 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 gi|121638383|ref|YP_978607.1| - 6.5 7.5 6.3 57 4.5 5.7 2.4 1 1 1 2 2 2 0 HlyD family secretion protein Carboxyl_trans PF01039.22 gi|121638384|ref|YP_978608.1| - 3e-149 497.9 0.0 3.9e-149 497.5 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|121638384|ref|YP_978608.1| - 2.9e-05 23.7 0.4 0.022 14.2 0.0 2.3 2 0 0 2 2 2 2 Malonate decarboxylase gamma subunit (MdcE) CoA_trans PF01144.23 gi|121638385|ref|YP_978609.1| - 4.9e-49 166.7 0.7 5.5e-49 166.5 0.7 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hyd_C PF13336.6 gi|121638385|ref|YP_978609.1| - 1.4e-06 28.3 0.1 2e-06 27.8 0.1 1.2 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain CoA_trans PF01144.23 gi|121638386|ref|YP_978610.1| - 1.2e-78 263.5 0.1 1.3e-78 263.3 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AMP-binding PF00501.28 gi|121638387|ref|YP_978611.1| - 1.7e-111 372.8 0.3 2e-111 372.6 0.3 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121638387|ref|YP_978611.1| - 2.6e-16 60.4 0.0 3.2e-15 56.9 0.0 2.6 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain TetR_N PF00440.23 gi|121638388|ref|YP_978612.1| - 1.3e-18 66.5 0.2 2.9e-18 65.4 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|121638388|ref|YP_978612.1| - 1.5e-08 34.9 0.1 2.8e-08 34.0 0.1 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Mycobact_memb PF05423.13 gi|121638389|ref|YP_978613.1| - 2.6e-05 24.1 0.2 2.6e-05 24.1 0.2 1.5 2 0 0 2 2 2 1 Mycobacterium membrane protein DUF1180 PF06679.12 gi|121638389|ref|YP_978613.1| - 0.066 13.6 0.4 0.066 13.6 0.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1180) ATG22 PF11700.8 gi|121638390|ref|YP_978614.1| - 4.1e-26 91.7 11.5 4.1e-26 91.7 11.5 2.1 1 1 1 2 2 2 1 Vacuole effluxer Atg22 like MFS_1 PF07690.16 gi|121638390|ref|YP_978614.1| - 7.1e-18 64.7 42.3 1e-17 64.1 42.3 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF485 PF04341.12 gi|121638390|ref|YP_978614.1| - 9 6.3 11.7 0.054 13.4 1.0 2.9 3 0 0 3 3 3 0 Protein of unknown function, DUF485 adh_short PF00106.25 gi|121638391|ref|YP_978615.1| - 3.9e-38 130.9 0.0 5e-38 130.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638391|ref|YP_978615.1| - 6.5e-24 84.8 0.1 8.7e-24 84.4 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121638391|ref|YP_978615.1| - 2e-10 40.9 0.2 3e-10 40.3 0.2 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121638391|ref|YP_978615.1| - 9.3e-05 22.0 0.5 0.00071 19.1 0.6 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Glyco_transf_4 PF13439.6 gi|121638391|ref|YP_978615.1| - 0.0013 18.7 0.7 0.25 11.3 0.2 2.4 2 1 0 2 2 2 2 Glycosyltransferase Family 4 NAD_binding_10 PF13460.6 gi|121638391|ref|YP_978615.1| - 0.0015 18.4 1.5 0.0037 17.2 1.5 1.7 1 1 0 1 1 1 1 NAD(P)H-binding Glyco_trans_4_4 PF13579.6 gi|121638391|ref|YP_978615.1| - 0.0015 19.0 4.3 0.032 14.7 1.3 2.3 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain F420_oxidored PF03807.17 gi|121638391|ref|YP_978615.1| - 0.0049 17.4 0.0 0.012 16.2 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 gi|121638391|ref|YP_978615.1| - 0.014 14.9 0.3 3.1 7.3 0.3 2.3 2 1 0 2 2 2 0 NmrA-like family DUF1776 PF08643.10 gi|121638391|ref|YP_978615.1| - 0.045 13.1 0.0 0.097 12.0 0.0 1.6 2 0 0 2 2 2 0 Fungal family of unknown function (DUF1776) Glyco_tran_WecB PF03808.13 gi|121638391|ref|YP_978615.1| - 0.16 11.9 0.0 0.71 9.8 0.0 1.9 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family DUF853 PF05872.12 gi|121638392|ref|YP_978616.1| - 4.1e-213 708.5 0.0 5.2e-213 708.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) DUF87 PF01935.17 gi|121638392|ref|YP_978616.1| - 3.8e-07 30.4 0.0 9.6e-07 29.1 0.0 1.4 1 1 0 1 1 1 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 gi|121638392|ref|YP_978616.1| - 2.9e-05 23.2 0.3 8.3e-05 21.7 0.1 1.8 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|121638392|ref|YP_978616.1| - 0.00011 22.5 0.1 0.03 14.6 0.1 2.5 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 gi|121638392|ref|YP_978616.1| - 0.00013 22.0 0.0 0.011 15.7 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|121638392|ref|YP_978616.1| - 0.00075 19.9 8.1 0.0027 18.1 0.5 3.4 2 2 1 3 3 3 1 AAA ATPase domain AAA_30 PF13604.6 gi|121638392|ref|YP_978616.1| - 0.00082 19.1 1.6 0.0057 16.4 1.6 2.2 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|121638392|ref|YP_978616.1| - 0.0015 17.9 0.0 0.0042 16.5 0.0 1.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA PF00004.29 gi|121638392|ref|YP_978616.1| - 0.0018 18.7 0.3 0.62 10.5 0.2 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 gi|121638392|ref|YP_978616.1| - 0.0099 14.8 0.0 0.47 9.3 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain CbiA PF01656.23 gi|121638392|ref|YP_978616.1| - 0.037 14.1 0.0 0.057 13.5 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 gi|121638392|ref|YP_978616.1| - 0.045 14.1 0.1 0.094 13.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|121638392|ref|YP_978616.1| - 0.063 12.5 0.3 2.7 7.1 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Zeta_toxin PF06414.12 gi|121638392|ref|YP_978616.1| - 0.066 12.5 0.4 0.12 11.7 0.4 1.3 1 0 0 1 1 1 0 Zeta toxin DEAD PF00270.29 gi|121638392|ref|YP_978616.1| - 0.086 12.6 0.2 2 8.1 0.1 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase T2SSE PF00437.20 gi|121638392|ref|YP_978616.1| - 0.095 11.7 0.1 0.16 11.0 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF1815 PF08844.10 gi|121638392|ref|YP_978616.1| - 0.16 12.0 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) AAA_7 PF12775.7 gi|121638392|ref|YP_978616.1| - 0.21 11.1 0.1 0.36 10.3 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_6 PF12774.7 gi|121638392|ref|YP_978616.1| - 0.27 10.1 0.2 0.43 9.5 0.2 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region RNase_T PF00929.24 gi|121638393|ref|YP_978617.1| - 6.6e-32 111.3 0.0 8.8e-32 110.9 0.0 1.2 1 0 0 1 1 1 1 Exonuclease ACC_epsilon PF13822.6 gi|121638393|ref|YP_978617.1| - 5.8 7.7 5.9 0.81 10.4 0.9 2.1 2 0 0 2 2 2 0 Acyl-CoA carboxylase epsilon subunit Transposase_mut PF00872.18 gi|121638394|ref|YP_978618.1| - 2.2e-154 514.0 0.0 2.4e-154 513.8 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121638394|ref|YP_978618.1| - 2e-05 24.9 0.0 5.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DUF4411 PF14367.6 gi|121638397|ref|YP_978621.1| - 5e-39 133.8 0.0 5.6e-39 133.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4411) PIN PF01850.21 gi|121638397|ref|YP_978621.1| - 0.017 15.6 0.0 0.025 15.1 0.0 1.2 1 0 0 1 1 1 0 PIN domain Suppressor_APC PF11414.8 gi|121638397|ref|YP_978621.1| - 0.16 12.1 0.1 0.24 11.5 0.1 1.3 1 0 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein Peptidase_M78 PF06114.13 gi|121638398|ref|YP_978622.1| - 3.6e-21 75.4 0.0 6.9e-21 74.4 0.0 1.5 1 0 0 1 1 1 1 IrrE N-terminal-like domain HTH_3 PF01381.22 gi|121638398|ref|YP_978622.1| - 4.9e-08 32.9 0.0 1.2e-07 31.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121638398|ref|YP_978622.1| - 2e-07 31.3 3.4 3e-07 30.7 1.7 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_50 PF18024.1 gi|121638398|ref|YP_978622.1| - 0.045 13.4 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain GlutR_dimer PF00745.20 gi|121638398|ref|YP_978622.1| - 0.053 14.0 0.0 4.1 7.9 0.0 2.5 2 0 0 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain Sigma70_r4 PF04545.16 gi|121638399|ref|YP_978623.1| - 0.00019 20.9 0.0 0.00044 19.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|121638399|ref|YP_978623.1| - 0.00082 19.1 0.0 0.002 17.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_17 PF12728.7 gi|121638399|ref|YP_978623.1| - 0.0034 17.5 0.0 0.0069 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121638399|ref|YP_978623.1| - 0.007 16.2 0.0 0.016 15.0 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|121638399|ref|YP_978623.1| - 0.0071 16.3 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_AsnC-type PF13404.6 gi|121638399|ref|YP_978623.1| - 0.026 14.4 0.0 0.061 13.2 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|121638399|ref|YP_978623.1| - 0.073 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT KORA PF16509.5 gi|121638399|ref|YP_978623.1| - 0.091 13.1 0.3 0.86 9.9 0.0 2.3 2 0 0 2 2 2 0 TrfB plasmid transcriptional repressor Sigma70_r3 PF04539.16 gi|121638399|ref|YP_978623.1| - 0.094 12.8 0.0 1.7 8.8 0.0 2.2 2 0 0 2 2 2 0 Sigma-70 region 3 HTH_10 PF04967.12 gi|121638399|ref|YP_978623.1| - 0.11 12.3 0.0 0.27 11.1 0.0 1.6 2 0 0 2 2 2 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|121638399|ref|YP_978623.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.6 gi|121638399|ref|YP_978623.1| - 0.13 11.9 0.0 0.31 10.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Ham1p_like PF01725.16 gi|121638400|ref|YP_978624.1| - 0.054 13.4 0.0 0.06 13.3 0.0 1.0 1 0 0 1 1 1 0 Ham1 family Big_10 PF17964.1 gi|121638401|ref|YP_978625.1| - 4.2e-67 225.6 0.1 6.5e-67 225.0 0.1 1.3 1 0 0 1 1 1 1 Bacterial Ig domain YkuD PF03734.14 gi|121638401|ref|YP_978625.1| - 3.1e-16 60.1 0.7 6.6e-16 59.0 0.7 1.5 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Big_5 PF13205.6 gi|121638401|ref|YP_978625.1| - 1.2e-05 26.0 0.0 0.0047 17.6 0.0 2.7 1 1 1 2 2 2 2 Bacterial Ig-like domain PE PF00934.20 gi|121638402|ref|YP_978626.1| - 4.4e-29 100.6 19.0 6.6e-29 100.1 19.0 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121638402|ref|YP_978626.1| - 0.014 15.8 12.1 0.022 15.2 12.1 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Asp_protease_2 PF13650.6 gi|121638402|ref|YP_978626.1| - 0.022 15.4 0.4 0.12 13.0 0.1 2.6 2 0 0 2 2 2 0 Aspartyl protease DUF3618 PF12277.8 gi|121638403|ref|YP_978627.1| - 3.2e-18 65.7 5.8 3.8e-18 65.5 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3618) Synaptobrevin PF00957.21 gi|121638403|ref|YP_978627.1| - 0.58 10.0 0.1 0.58 10.0 0.1 2.0 1 1 1 2 2 2 0 Synaptobrevin AhpC-TSA PF00578.21 gi|121638404|ref|YP_978628.1| - 5.1e-41 139.5 0.0 6e-41 139.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121638404|ref|YP_978628.1| - 2.7e-29 101.8 0.0 3e-29 101.6 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF899 PF05988.12 gi|121638404|ref|YP_978628.1| - 0.00011 21.9 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) AhpC-TSA_2 PF13911.6 gi|121638404|ref|YP_978628.1| - 0.00029 20.9 0.0 0.001 19.2 0.0 1.7 1 1 1 2 2 2 1 AhpC/TSA antioxidant enzyme SCO1-SenC PF02630.14 gi|121638404|ref|YP_978628.1| - 0.017 15.0 0.0 0.031 14.2 0.0 1.5 1 1 0 1 1 1 0 SCO1/SenC GSHPx PF00255.19 gi|121638404|ref|YP_978628.1| - 0.03 13.9 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 Glutathione peroxidase Peptidase_M20 PF01546.28 gi|121638405|ref|YP_978629.1| - 4.3e-33 114.8 0.8 6.1e-33 114.3 0.8 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|121638405|ref|YP_978629.1| - 4.2e-19 68.5 0.0 7.9e-19 67.6 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain ACPS PF01648.20 gi|121638406|ref|YP_978630.1| - 1.3e-18 67.1 0.0 1.6e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily 4PPT_N PF17837.1 gi|121638406|ref|YP_978630.1| - 0.21 11.7 2.9 9.2 6.5 0.1 2.4 2 1 0 2 2 2 0 4'-phosphopantetheinyl transferase N-terminal domain DUF1729 PF08354.10 gi|121638407|ref|YP_978631.1| - 8e-113 376.9 0.0 1.2e-112 376.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1729) Acyl_transf_1 PF00698.21 gi|121638407|ref|YP_978631.1| - 2.9e-41 142.0 1.1 3.4e-35 122.1 0.6 3.7 2 1 1 3 3 3 2 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121638407|ref|YP_978631.1| - 8.7e-39 133.6 0.1 2.8e-38 131.9 0.1 1.9 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain MaoC_dehydratas PF01575.19 gi|121638407|ref|YP_978631.1| - 3.3e-31 107.4 0.1 7.7e-31 106.2 0.1 1.7 1 0 0 1 1 1 1 MaoC like domain Ketoacyl-synt_C PF02801.22 gi|121638407|ref|YP_978631.1| - 2.7e-29 101.6 0.0 7.4e-29 100.2 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain DNA_pol_B_N PF18094.1 gi|121638407|ref|YP_978631.1| - 4e-24 85.2 2.7 1.1e-23 83.8 2.7 1.8 1 0 0 1 1 1 1 DNA polymerase beta N-terminal domain Fas_alpha_ACP PF18325.1 gi|121638407|ref|YP_978631.1| - 2e-05 25.0 0.0 4.8e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 Fatty acid synthase subunit alpha Acyl carrier domain FAS_I_H PF18314.1 gi|121638407|ref|YP_978631.1| - 2.9e-05 23.8 0.0 5.4e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Fatty acid synthase type I helical domain adh_short PF00106.25 gi|121638407|ref|YP_978631.1| - 0.00042 19.8 0.4 0.003 17.0 0.1 2.5 2 0 0 2 2 2 1 short chain dehydrogenase MaoC_dehydrat_N PF13452.6 gi|121638407|ref|YP_978631.1| - 0.12 12.6 0.3 0.78 9.9 0.0 2.4 2 0 0 2 2 2 0 N-terminal half of MaoC dehydratase DUF1906 PF08924.11 gi|121638408|ref|YP_978632.1| - 1.5e-42 146.0 2.4 1.9e-42 145.7 2.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1906) TAT_signal PF10518.9 gi|121638408|ref|YP_978632.1| - 0.0004 20.1 0.7 0.0004 20.1 0.7 3.3 4 0 0 4 4 4 1 TAT (twin-arginine translocation) pathway signal sequence VapB_antitoxin PF09957.9 gi|121638409|ref|YP_978633.1| - 3.3e-08 33.3 5.3 4.8e-08 32.8 5.3 1.3 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB CcdA PF07362.12 gi|121638409|ref|YP_978633.1| - 0.00068 20.0 1.2 0.00087 19.7 1.2 1.2 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA PSK_trans_fac PF07704.11 gi|121638409|ref|YP_978633.1| - 0.0033 18.2 7.9 0.0041 17.9 7.9 1.1 1 0 0 1 1 1 1 Rv0623-like transcription factor BrnA_antitoxin PF14384.6 gi|121638409|ref|YP_978633.1| - 0.2 12.2 2.7 0.21 12.1 0.2 2.0 2 1 0 2 2 2 0 BrnA antitoxin of type II toxin-antitoxin system PIN PF01850.21 gi|121638410|ref|YP_978634.1| - 1.4e-05 25.6 0.1 1.6e-05 25.4 0.1 1.1 1 0 0 1 1 1 1 PIN domain Mrr_cat PF04471.12 gi|121638411|ref|YP_978635.1| - 2.8e-37 127.3 0.0 5.6e-37 126.3 0.0 1.5 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.6 gi|121638411|ref|YP_978635.1| - 1.3e-28 99.0 0.0 3.1e-28 97.7 0.0 1.6 1 0 0 1 1 1 1 Mrr N-terminal domain Mrr_cat_2 PF13156.6 gi|121638411|ref|YP_978635.1| - 7.7e-11 42.0 0.0 1.3e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease ERCC4 PF02732.15 gi|121638412|ref|YP_978636.1| - 5.8e-09 36.3 0.0 1e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 ERCC4 domain Lsr2 PF11774.8 gi|121638412|ref|YP_978636.1| - 2.7e-07 30.7 0.5 6.3e-06 26.3 0.1 2.4 2 0 0 2 2 2 1 Lsr2 PIN PF01850.21 gi|121638413|ref|YP_978637.1| - 1.1e-07 32.4 0.0 1.3e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 PIN domain VapB_antitoxin PF09957.9 gi|121638414|ref|YP_978638.1| - 0.00015 21.6 0.1 0.00025 20.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB RHH_1 PF01402.21 gi|121638414|ref|YP_978638.1| - 0.07 13.1 1.3 0.07 13.1 1.3 1.7 2 1 0 2 2 2 0 Ribbon-helix-helix protein, copG family RHH_4 PF13467.6 gi|121638414|ref|YP_978638.1| - 0.073 13.0 0.0 0.087 12.7 0.0 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix domain OKR_DC_1 PF01276.20 gi|121638415|ref|YP_978639.1| - 6.1e-75 252.5 0.0 2e-49 168.5 0.0 2.1 2 0 0 2 2 2 2 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 gi|121638415|ref|YP_978639.1| - 5.2e-05 23.6 0.1 0.00024 21.4 0.0 2.1 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, C-terminal domain Beta_elim_lyase PF01212.21 gi|121638415|ref|YP_978639.1| - 0.0098 15.2 0.0 0.017 14.4 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|121638415|ref|YP_978639.1| - 0.012 14.8 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class I and II DUF1380 PF07128.12 gi|121638415|ref|YP_978639.1| - 0.041 14.1 0.3 0.11 12.6 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1380) Phage_holin_3_6 PF07332.11 gi|121638416|ref|YP_978640.1| - 1.7 8.7 10.8 0.49 10.4 8.2 1.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III NusB PF01029.18 gi|121638417|ref|YP_978641.1| - 7.5e-34 116.9 0.0 8.9e-34 116.6 0.0 1.1 1 0 0 1 1 1 1 NusB family EFP_N PF08207.12 gi|121638418|ref|YP_978642.1| - 2.6e-26 91.4 0.8 6.3e-26 90.2 0.4 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain Elong-fact-P_C PF09285.11 gi|121638418|ref|YP_978642.1| - 6.5e-26 89.9 0.1 5.3e-25 86.9 0.0 2.5 3 0 0 3 3 3 1 Elongation factor P, C-terminal EFP PF01132.20 gi|121638418|ref|YP_978642.1| - 8.1e-22 77.0 0.0 1.4e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Peptidase_M24 PF00557.24 gi|121638419|ref|YP_978643.1| - 1.1e-60 204.9 0.3 1.5e-60 204.5 0.3 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|121638419|ref|YP_978643.1| - 5e-24 85.4 0.1 1.1e-23 84.3 0.1 1.6 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DUF1282 PF06930.12 gi|121638420|ref|YP_978644.1| - 0.0017 18.2 3.3 0.0019 18.0 2.5 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) DUF3341 PF11821.8 gi|121638420|ref|YP_978644.1| - 0.027 14.1 0.0 0.055 13.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) DUF3043 PF11241.8 gi|121638420|ref|YP_978644.1| - 0.17 11.9 0.6 8.7 6.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) Metal_resist PF13801.6 gi|121638420|ref|YP_978644.1| - 0.31 11.2 8.2 2.7 8.2 1.9 2.8 2 2 0 2 2 2 0 Heavy-metal resistance Tetraspanin PF00335.20 gi|121638420|ref|YP_978644.1| - 0.42 10.3 1.4 1.3 8.6 0.0 2.1 2 0 0 2 2 2 0 Tetraspanin family Silic_transp PF03842.13 gi|121638420|ref|YP_978644.1| - 0.46 8.7 3.6 1 7.6 1.5 1.9 2 0 0 2 2 2 0 Silicon transporter 5TM-5TMR_LYT PF07694.12 gi|121638420|ref|YP_978644.1| - 1.5 8.3 14.1 0.16 11.5 5.6 2.1 2 0 0 2 2 2 0 5TMR of 5TMR-LYT DUF2749 PF10907.8 gi|121638420|ref|YP_978644.1| - 1.6 9.0 0.0 1.6 9.0 0.0 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF2749) DUF5316 PF17247.2 gi|121638420|ref|YP_978644.1| - 3.8 7.6 7.2 0.46 10.5 0.2 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5316) DHquinase_II PF01220.19 gi|121638421|ref|YP_978645.1| - 6.9e-54 181.3 0.0 7.9e-54 181.1 0.0 1.0 1 0 0 1 1 1 1 Dehydroquinase class II BtrH_N PF14399.6 gi|121638421|ref|YP_978645.1| - 0.046 14.0 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal DHQ_synthase PF01761.20 gi|121638422|ref|YP_978646.1| - 1.3e-92 309.7 0.0 1.6e-92 309.4 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|121638422|ref|YP_978646.1| - 5.4e-09 36.1 1.8 2.5e-08 34.0 0.2 2.0 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|121638422|ref|YP_978646.1| - 1.2e-07 30.9 4.2 3.9e-07 29.2 4.2 1.9 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase SKI PF01202.22 gi|121638423|ref|YP_978647.1| - 2.3e-45 154.6 0.0 2.5e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|121638423|ref|YP_978647.1| - 6e-08 33.0 0.0 1.3e-07 31.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|121638423|ref|YP_978647.1| - 2.6e-07 31.3 0.0 3e-07 31.0 0.0 1.3 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|121638423|ref|YP_978647.1| - 0.0016 18.6 0.1 0.0038 17.4 0.1 1.7 1 1 1 2 2 2 1 Cytidylate kinase-like family AAA_17 PF13207.6 gi|121638423|ref|YP_978647.1| - 0.0019 18.6 0.1 0.0047 17.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|121638423|ref|YP_978647.1| - 0.0033 17.4 0.2 0.0058 16.6 0.2 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|121638423|ref|YP_978647.1| - 0.0036 16.7 0.0 0.0057 16.1 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI KTI12 PF08433.10 gi|121638423|ref|YP_978647.1| - 0.0078 15.7 0.0 0.01 15.3 0.0 1.1 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Cytidylate_kin PF02224.18 gi|121638423|ref|YP_978647.1| - 0.0083 15.9 0.4 0.026 14.3 0.1 1.8 2 1 0 2 2 2 1 Cytidylate kinase AAA PF00004.29 gi|121638423|ref|YP_978647.1| - 0.011 16.1 0.0 0.018 15.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|121638423|ref|YP_978647.1| - 0.013 15.8 0.0 0.046 14.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain ParA PF10609.9 gi|121638423|ref|YP_978647.1| - 0.025 14.0 0.1 0.034 13.6 0.1 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase 6PF2K PF01591.18 gi|121638423|ref|YP_978647.1| - 0.026 13.8 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase MMR_HSR1 PF01926.23 gi|121638423|ref|YP_978647.1| - 0.039 14.0 0.0 0.051 13.6 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase CoaE PF01121.20 gi|121638423|ref|YP_978647.1| - 0.041 13.5 0.1 0.065 12.9 0.1 1.4 1 0 0 1 1 1 0 Dephospho-CoA kinase Gly_kinase PF02595.15 gi|121638423|ref|YP_978647.1| - 0.043 12.8 0.2 0.063 12.3 0.2 1.2 1 0 0 1 1 1 0 Glycerate kinase family AAA_28 PF13521.6 gi|121638423|ref|YP_978647.1| - 0.055 13.7 0.0 0.09 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|121638423|ref|YP_978647.1| - 0.065 13.6 0.5 0.066 13.6 0.5 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|121638423|ref|YP_978647.1| - 0.17 11.5 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Chorismate_synt PF01264.21 gi|121638424|ref|YP_978648.1| - 4.7e-118 393.6 1.1 5.4e-118 393.4 1.1 1.0 1 0 0 1 1 1 1 Chorismate synthase T7SS_ESX_EspC PF10824.8 gi|121638425|ref|YP_978649.1| - 0.00013 22.3 17.6 0.00044 20.7 17.6 1.7 1 1 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm Abhydrolase_8 PF06259.12 gi|121638426|ref|YP_978650.1| - 4.8e-77 257.6 0.9 1.2e-76 256.3 0.9 1.7 1 0 0 1 1 1 1 Alpha/beta hydrolase Ser_hydrolase PF06821.13 gi|121638426|ref|YP_978650.1| - 0.09 12.6 0.0 5.7 6.8 0.0 2.3 1 1 1 2 2 2 0 Serine hydrolase LppA PF16708.5 gi|121638427|ref|YP_978651.1| - 2.4e-43 147.7 0.0 3.1e-43 147.3 0.0 1.1 1 0 0 1 1 1 1 Lipoprotein confined to pathogenic Mycobacterium LppA PF16708.5 gi|121638428|ref|YP_978652.1| - 2.2e-40 138.1 0.0 2.8e-40 137.7 0.0 1.1 1 0 0 1 1 1 1 Lipoprotein confined to pathogenic Mycobacterium LppA PF16708.5 gi|121638429|ref|YP_978653.1| - 7.1e-39 133.2 0.0 9.2e-39 132.8 0.0 1.1 1 0 0 1 1 1 1 Lipoprotein confined to pathogenic Mycobacterium VapB_antitoxin PF09957.9 gi|121638430|ref|YP_978654.1| - 6.8e-06 25.9 2.4 1.1e-05 25.3 2.4 1.3 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB PIN PF01850.21 gi|121638431|ref|YP_978655.1| - 1.1e-14 55.0 1.3 1.3e-14 54.8 1.3 1.0 1 0 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|121638432|ref|YP_978656.1| - 5.5e-12 45.2 0.5 1.4e-11 43.9 0.5 1.7 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121638432|ref|YP_978656.1| - 0.007 16.2 0.2 0.026 14.4 0.1 1.8 2 0 0 2 2 2 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 PSK_trans_fac PF07704.11 gi|121638432|ref|YP_978656.1| - 0.018 15.8 0.9 1.8 9.4 0.5 2.1 1 1 1 2 2 2 0 Rv0623-like transcription factor RHH_4 PF13467.6 gi|121638432|ref|YP_978656.1| - 0.032 14.1 0.1 0.042 13.7 0.1 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain DUF1778 PF08681.11 gi|121638432|ref|YP_978656.1| - 0.049 13.6 0.1 0.062 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) Lipase_chap PF03280.14 gi|121638432|ref|YP_978656.1| - 0.087 12.8 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein HicB_lk_antitox PF15919.5 gi|121638432|ref|YP_978656.1| - 0.16 12.1 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system PIN PF01850.21 gi|121638433|ref|YP_978657.1| - 1.7e-11 44.7 1.2 2.1e-11 44.4 1.2 1.1 1 0 0 1 1 1 1 PIN domain PIN PF01850.21 gi|121638434|ref|YP_978658.1| - 5.7e-17 62.4 0.0 6.4e-17 62.2 0.0 1.0 1 0 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|121638435|ref|YP_978659.1| - 2.3e-07 30.5 4.6 3.5e-07 29.9 4.6 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family Peptidase_A24 PF01478.18 gi|121638436|ref|YP_978660.1| - 4.9e-17 62.3 12.7 7.4e-17 61.7 12.7 1.3 1 0 0 1 1 1 1 Type IV leader peptidase family Shikimate_dh_N PF08501.11 gi|229576791|ref|YP_978661.2| - 5.2e-18 65.1 0.0 9.9e-18 64.2 0.0 1.5 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|229576791|ref|YP_978661.2| - 3.3e-10 39.5 0.7 6.1e-10 38.7 0.7 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|229576791|ref|YP_978661.2| - 0.0002 21.5 0.1 0.00031 20.8 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|229576791|ref|YP_978661.2| - 0.12 13.0 0.5 0.27 11.8 0.5 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent YceG PF02618.16 gi|121638438|ref|YP_978662.1| - 4.6e-64 216.6 0.0 5.6e-64 216.4 0.0 1.1 1 0 0 1 1 1 1 YceG-like family Vac7 PF12751.7 gi|121638438|ref|YP_978662.1| - 0.15 11.5 1.4 0.33 10.3 1.4 1.5 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 RuvX PF03652.15 gi|121638439|ref|YP_978663.1| - 1.4e-41 142.0 0.6 1.6e-41 141.8 0.6 1.0 1 0 0 1 1 1 1 Holliday junction resolvase tRNA-synt_2c PF01411.19 gi|121638440|ref|YP_978664.1| - 2.1e-206 686.7 0.0 2.6e-206 686.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|121638440|ref|YP_978664.1| - 1.8e-19 70.6 6.0 4.1e-19 69.4 4.5 2.3 2 0 0 2 2 2 1 DHHA1 domain tRNA_SAD PF07973.14 gi|121638440|ref|YP_978664.1| - 8.6e-17 61.0 0.2 1.8e-16 59.9 0.2 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain ACR_tran PF00873.19 gi|121638440|ref|YP_978664.1| - 0.001 16.8 0.0 0.0024 15.6 0.0 1.5 2 0 0 2 2 2 1 AcrB/AcrD/AcrF family DUF1192 PF06698.11 gi|121638440|ref|YP_978664.1| - 3.8 7.6 6.0 14 5.9 6.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) UPF0047 PF01894.17 gi|121638441|ref|YP_978665.1| - 9e-25 87.1 0.0 1.2e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 ABM PF03992.16 gi|121638442|ref|YP_978666.1| - 1.6e-07 31.3 0.7 0.00018 21.6 0.0 3.1 2 1 1 3 3 3 2 Antibiotic biosynthesis monooxygenase ABM PF03992.16 gi|121638443|ref|YP_978667.1| - 1.2e-06 28.5 0.0 0.0069 16.5 0.0 2.3 2 0 0 2 2 2 2 Antibiotic biosynthesis monooxygenase MgsA_C PF12002.8 gi|121638444|ref|YP_978668.1| - 7.3e-69 231.0 0.3 1.3e-68 230.1 0.3 1.4 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal AAA_assoc_2 PF16193.5 gi|121638444|ref|YP_978668.1| - 1.2e-26 92.8 2.9 1.5e-26 92.5 0.8 2.2 2 0 0 2 2 2 1 AAA C-terminal domain AAA PF00004.29 gi|121638444|ref|YP_978668.1| - 5.2e-14 52.8 0.1 1.6e-13 51.2 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121638444|ref|YP_978668.1| - 3.4e-13 49.7 0.0 1.1e-12 48.0 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|121638444|ref|YP_978668.1| - 7.8e-10 38.9 0.3 3.4e-08 33.6 0.2 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|121638444|ref|YP_978668.1| - 2e-06 27.6 0.1 0.012 15.3 0.0 2.5 1 1 1 2 2 2 2 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 gi|121638444|ref|YP_978668.1| - 4.8e-06 26.7 0.0 9.5e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|121638444|ref|YP_978668.1| - 7.3e-06 26.5 9.4 0.0003 21.2 0.2 3.2 1 1 2 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 gi|121638444|ref|YP_978668.1| - 3.1e-05 24.3 0.8 0.047 13.9 0.1 2.7 1 1 1 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|121638444|ref|YP_978668.1| - 5.5e-05 22.6 7.5 0.013 14.9 0.1 3.2 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|121638444|ref|YP_978668.1| - 0.00013 21.9 1.4 0.039 13.9 0.0 2.3 1 1 1 2 2 2 1 NACHT domain AAA_18 PF13238.6 gi|121638444|ref|YP_978668.1| - 0.00022 21.8 0.0 0.00038 21.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|121638444|ref|YP_978668.1| - 0.00038 19.8 0.1 0.0011 18.2 0.1 1.7 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_14 PF13173.6 gi|121638444|ref|YP_978668.1| - 0.00052 20.1 0.0 0.00098 19.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|121638444|ref|YP_978668.1| - 0.00053 20.0 0.5 0.015 15.3 0.1 2.2 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_25 PF13481.6 gi|121638444|ref|YP_978668.1| - 0.00064 19.3 3.9 0.00087 18.9 0.1 2.9 2 2 0 3 3 3 1 AAA domain AAA_3 PF07726.11 gi|121638444|ref|YP_978668.1| - 0.0011 18.8 1.2 0.01 15.7 0.1 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|121638444|ref|YP_978668.1| - 0.0016 18.2 4.4 0.0025 17.6 1.1 2.7 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|121638444|ref|YP_978668.1| - 0.0025 17.5 0.0 0.005 16.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 gi|121638444|ref|YP_978668.1| - 0.0043 17.2 0.0 0.011 16.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|121638444|ref|YP_978668.1| - 0.0045 16.2 0.0 0.0074 15.5 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain DNA_pol3_delta2 PF13177.6 gi|121638444|ref|YP_978668.1| - 0.0054 16.5 0.1 0.044 13.6 0.1 2.0 1 1 1 2 2 2 1 DNA polymerase III, delta subunit AAA_24 PF13479.6 gi|121638444|ref|YP_978668.1| - 0.0082 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|121638444|ref|YP_978668.1| - 0.018 15.5 0.0 0.053 13.9 0.0 1.9 2 0 0 2 2 1 0 AAA domain Zeta_toxin PF06414.12 gi|121638444|ref|YP_978668.1| - 0.021 14.1 0.1 0.057 12.7 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 gi|121638444|ref|YP_978668.1| - 0.021 15.2 0.0 0.038 14.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_23 PF13476.6 gi|121638444|ref|YP_978668.1| - 0.024 15.2 0.0 0.036 14.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|121638444|ref|YP_978668.1| - 0.026 14.4 0.3 1.3 8.9 0.0 2.3 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|121638444|ref|YP_978668.1| - 0.033 14.7 0.1 0.14 12.7 0.1 1.8 1 1 0 1 1 1 0 ABC transporter MCM PF00493.23 gi|121638444|ref|YP_978668.1| - 0.034 13.2 0.0 0.082 12.0 0.0 1.6 1 1 0 1 1 1 0 MCM P-loop domain AAA_28 PF13521.6 gi|121638444|ref|YP_978668.1| - 0.051 13.8 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|121638444|ref|YP_978668.1| - 0.074 11.7 0.0 0.1 11.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 gi|121638444|ref|YP_978668.1| - 0.075 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 gi|121638444|ref|YP_978668.1| - 0.092 13.1 6.2 2.6 8.4 0.2 2.8 2 1 1 3 3 3 0 AAA domain TsaE PF02367.17 gi|121638444|ref|YP_978668.1| - 0.12 12.4 0.0 0.45 10.5 0.0 1.9 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|121638444|ref|YP_978668.1| - 0.13 12.2 0.2 0.6 10.0 0.0 1.9 1 1 1 2 2 2 0 NTPase HTH_32 PF13565.6 gi|121638444|ref|YP_978668.1| - 0.14 12.8 0.2 0.51 11.0 0.2 2.1 1 0 0 1 1 1 0 Homeodomain-like domain UPF0259 PF06790.11 gi|121638445|ref|YP_978669.1| - 0.011 15.6 3.2 0.013 15.3 2.9 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0259) Trp_oprn_chp PF09534.10 gi|121638445|ref|YP_978669.1| - 1.2 8.9 18.4 2 8.1 7.6 2.1 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF2070 PF09843.9 gi|121638445|ref|YP_978669.1| - 3.5 5.8 15.0 5 5.3 15.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Claudin_2 PF13903.6 gi|121638445|ref|YP_978669.1| - 3.5 7.3 8.7 0.53 10.0 4.2 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF2652 PF10851.8 gi|121638446|ref|YP_978670.1| - 4.4e-45 152.6 0.0 5.8e-45 152.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2652) FtsX PF02687.21 gi|121638447|ref|YP_978671.1| - 5.4e-05 23.6 10.8 5.4e-05 23.6 10.8 3.2 2 1 1 3 3 3 1 FtsX-like permease family EIIC-GAT PF03611.14 gi|121638447|ref|YP_978671.1| - 0.051 12.7 12.7 0.011 14.8 9.4 1.5 2 0 0 2 2 2 0 PTS system sugar-specific permease component ABC_tran PF00005.27 gi|121638448|ref|YP_978672.1| - 2.7e-31 108.9 0.0 4.7e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter cNMP_binding PF00027.29 gi|121638448|ref|YP_978672.1| - 2.5e-19 69.1 0.3 6e-19 67.9 0.2 1.7 2 0 0 2 2 1 1 Cyclic nucleotide-binding domain AAA_21 PF13304.6 gi|121638448|ref|YP_978672.1| - 1e-09 38.7 0.4 0.0001 22.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121638448|ref|YP_978672.1| - 3.1e-06 26.8 0.1 5.2e-05 22.8 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|121638448|ref|YP_978672.1| - 0.00012 22.5 0.1 0.0003 21.2 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|121638448|ref|YP_978672.1| - 0.002 18.7 0.0 0.0029 18.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121638448|ref|YP_978672.1| - 0.0034 17.0 1.6 0.0083 15.7 0.1 2.3 2 1 0 3 3 3 1 AAA domain AAA_30 PF13604.6 gi|121638448|ref|YP_978672.1| - 0.0035 17.1 0.1 0.011 15.5 0.1 1.7 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|121638448|ref|YP_978672.1| - 0.0036 17.3 0.2 0.0059 16.5 0.2 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain Mg_chelatase PF01078.21 gi|121638448|ref|YP_978672.1| - 0.0046 16.4 0.0 0.0081 15.6 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|121638448|ref|YP_978672.1| - 0.0046 16.7 0.1 0.01 15.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|121638448|ref|YP_978672.1| - 0.0046 17.4 0.1 0.03 14.7 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|121638448|ref|YP_978672.1| - 0.01 15.8 0.0 0.028 14.4 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase PduV-EutP PF10662.9 gi|121638448|ref|YP_978672.1| - 0.026 14.3 0.2 0.18 11.5 0.2 2.1 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 gi|121638448|ref|YP_978672.1| - 0.033 14.5 2.5 0.45 10.8 2.5 2.2 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|121638448|ref|YP_978672.1| - 0.033 13.9 0.0 2.5 7.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 gi|121638448|ref|YP_978672.1| - 0.037 13.9 1.0 0.096 12.6 0.3 1.9 2 0 0 2 2 2 0 NACHT domain AAA_19 PF13245.6 gi|121638448|ref|YP_978672.1| - 0.085 13.2 0.1 0.17 12.2 0.1 1.6 1 1 0 1 1 1 0 AAA domain Urease_beta PF00699.20 gi|121638448|ref|YP_978672.1| - 0.097 12.7 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Urease beta subunit AAA_5 PF07728.14 gi|121638448|ref|YP_978672.1| - 0.11 12.4 0.4 0.25 11.3 0.4 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 gi|121638448|ref|YP_978672.1| - 0.14 12.5 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 gi|121638448|ref|YP_978672.1| - 0.21 11.8 1.1 0.43 10.8 0.5 1.8 2 0 0 2 2 2 0 AAA domain DLIC PF05783.11 gi|121638448|ref|YP_978672.1| - 0.21 10.4 0.0 0.37 9.6 0.0 1.3 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_33 PF13671.6 gi|121638448|ref|YP_978672.1| - 0.29 11.3 1.8 0.34 11.1 0.4 1.9 2 1 0 2 2 2 0 AAA domain Patatin PF01734.22 gi|121638449|ref|YP_978673.1| - 3.3e-21 76.4 12.1 1.9e-20 73.9 8.6 2.9 2 1 0 2 2 2 1 Patatin-like phospholipase cNMP_binding PF00027.29 gi|121638449|ref|YP_978673.1| - 4.6e-17 61.9 0.0 1.3e-16 60.4 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain DUF2126 PF09899.9 gi|121638450|ref|YP_978674.1| - 4.5e-72 243.4 0.0 5.8e-72 243.0 0.0 1.1 1 0 0 1 1 1 1 Putative amidoligase enzyme (DUF2126) Bact_transglu_N PF08379.10 gi|121638450|ref|YP_978674.1| - 1e-24 87.2 0.2 2.6e-24 85.9 0.2 1.8 1 0 0 1 1 1 1 Bacterial transglutaminase-like N-terminal region Transglut_core PF01841.19 gi|121638450|ref|YP_978674.1| - 2.6e-18 66.5 0.0 5e-18 65.6 0.0 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF2126 PF09899.9 gi|121638451|ref|YP_978675.1| - 6.2e-270 897.8 0.0 1.5e-269 896.6 0.0 1.5 1 1 0 1 1 1 1 Putative amidoligase enzyme (DUF2126) CP_ATPgrasp_2 PF14403.6 gi|121638452|ref|YP_978676.1| - 6.1e-126 420.3 0.0 8.8e-126 419.8 0.0 1.2 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 CP_ATPgrasp_1 PF04174.13 gi|121638452|ref|YP_978676.1| - 2.2e-125 418.1 0.0 3.1e-125 417.6 0.0 1.2 1 0 0 1 1 1 1 A circularly permuted ATPgrasp Alpha-E PF04168.12 gi|121638452|ref|YP_978676.1| - 3.7e-67 227.2 5.0 6.9e-67 226.3 5.0 1.4 1 0 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. Peptidase_Mx PF15887.5 gi|121638453|ref|YP_978677.1| - 3.9e-100 334.1 0.0 4.7e-100 333.8 0.0 1.0 1 0 0 1 1 1 1 Putative zinc-binding metallo-peptidase zinc-ribbon_6 PF10005.9 gi|121638453|ref|YP_978677.1| - 5.1e-18 65.5 3.2 4e-17 62.7 3.2 2.1 1 1 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|121638453|ref|YP_978677.1| - 0.001 18.4 1.4 0.001 18.4 1.4 2.6 3 0 0 3 3 3 1 zinc-ribbon domain Peptidase_Mx1 PF15890.5 gi|121638453|ref|YP_978677.1| - 0.0015 18.0 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Putative zinc-binding metallo-peptidase DZR PF12773.7 gi|121638453|ref|YP_978677.1| - 0.14 12.2 5.2 0.83 9.7 5.3 2.0 1 1 0 1 1 1 0 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|121638453|ref|YP_978677.1| - 0.16 12.1 0.6 5.1 7.2 0.1 2.5 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Bact_transglu_N PF08379.10 gi|121638454|ref|YP_978678.1| - 5.8e-23 81.6 1.0 1.3e-22 80.5 1.0 1.6 1 0 0 1 1 1 1 Bacterial transglutaminase-like N-terminal region Transglut_core PF01841.19 gi|121638454|ref|YP_978678.1| - 7.2e-16 58.6 0.0 1.2e-15 57.9 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 gi|121638454|ref|YP_978678.1| - 0.0023 17.5 0.0 0.0039 16.7 0.0 1.3 1 0 0 1 1 1 1 Transglutaminase-like domain YjbR PF04237.13 gi|121638455|ref|YP_978679.1| - 3.4e-06 27.5 0.0 4.2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 YjbR FUSC_2 PF13515.6 gi|121638456|ref|YP_978680.1| - 3.8e-13 49.7 17.8 6.8e-13 48.9 17.8 1.4 1 0 0 1 1 1 1 Fusaric acid resistance protein-like DUF2955 PF11168.8 gi|121638456|ref|YP_978680.1| - 9.4e-05 22.3 14.7 0.00016 21.5 14.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2955) ArAE_1 PF06081.11 gi|121638456|ref|YP_978680.1| - 0.00015 21.9 11.4 0.00015 21.9 11.4 2.2 2 1 0 2 2 2 1 Aromatic acid exporter family member 1 Rz1 PF06085.11 gi|121638456|ref|YP_978680.1| - 0.12 12.1 2.1 1.5 8.7 0.3 2.5 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor tRNA-synt_2 PF00152.20 gi|121638457|ref|YP_978681.1| - 6.2e-99 331.0 0.0 7.6e-99 330.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|121638457|ref|YP_978681.1| - 4.8e-16 58.5 0.0 1e-15 57.5 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain GAD PF02938.14 gi|121638457|ref|YP_978681.1| - 1.5e-12 47.5 0.0 3e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 GAD domain tRNA-synt_2b PF00587.25 gi|121638457|ref|YP_978681.1| - 0.19 11.7 0.0 0.31 11.0 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) ApbA_C PF08546.11 gi|121638458|ref|YP_978682.1| - 5e-23 81.7 0.1 1.1e-22 80.5 0.0 1.6 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 gi|121638458|ref|YP_978682.1| - 7.1e-17 61.5 0.0 1.1e-16 60.9 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Phage_lysis PF03245.13 gi|121638458|ref|YP_978682.1| - 0.062 13.4 0.1 0.17 12.0 0.1 1.7 1 0 0 1 1 1 0 Bacteriophage Rz lysis protein Polyketide_cyc2 PF10604.9 gi|121638459|ref|YP_978683.1| - 3e-21 76.2 0.5 3.6e-21 75.9 0.5 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121638459|ref|YP_978683.1| - 9.5e-05 22.6 0.1 0.00013 22.1 0.1 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|121638459|ref|YP_978683.1| - 0.00028 21.1 0.1 0.00034 20.9 0.1 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Zn_peptidase PF04228.13 gi|121638460|ref|YP_978684.1| - 6.7e-75 252.2 0.8 8.2e-75 251.9 0.8 1.0 1 0 0 1 1 1 1 Putative neutral zinc metallopeptidase Pur_ac_phosph_N PF16656.5 gi|121638462|ref|YP_978686.1| - 3.3e-16 59.6 0.7 7.1e-16 58.6 0.7 1.5 1 0 0 1 1 1 1 Purple acid Phosphatase, N-terminal domain Metallophos PF00149.28 gi|121638462|ref|YP_978686.1| - 2.9e-13 50.8 0.3 4.9e-13 50.0 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase UCR_Fe-S_N PF10399.9 gi|121638462|ref|YP_978686.1| - 0.011 15.1 2.8 0.011 15.1 2.8 2.0 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Metallophos_C PF14008.6 gi|121638462|ref|YP_978686.1| - 0.02 15.8 3.5 0.28 12.1 0.8 3.1 2 1 0 2 2 2 0 Iron/zinc purple acid phosphatase-like protein C TAT_signal PF10518.9 gi|121638462|ref|YP_978686.1| - 0.048 13.5 7.5 0.094 12.6 7.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Radical_SAM PF04055.21 gi|121638463|ref|YP_978687.1| - 4.3e-11 43.5 0.0 7.3e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121638463|ref|YP_978687.1| - 0.0094 16.2 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Abhydrolase_1 PF00561.20 gi|121638464|ref|YP_978688.1| - 2.3e-16 60.2 0.4 1.5e-15 57.5 0.6 1.8 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121638464|ref|YP_978688.1| - 5e-09 37.1 4.1 6e-09 36.8 4.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Acetyltransf_6 PF13480.7 gi|121638464|ref|YP_978688.1| - 0.041 14.0 0.7 13 5.9 0.3 3.3 2 2 1 4 4 4 0 Acetyltransferase (GNAT) domain Hydrolase_4 PF12146.8 gi|121638464|ref|YP_978688.1| - 0.18 11.0 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 tRNA-synt_His PF13393.6 gi|121638465|ref|YP_978689.1| - 3.3e-43 148.1 0.1 1.1e-42 146.4 0.1 1.8 1 1 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|121638465|ref|YP_978689.1| - 1.3e-17 64.3 0.0 2.3e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|121638465|ref|YP_978689.1| - 9.5e-15 54.5 0.0 3.3e-14 52.8 0.0 1.9 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2d PF01409.20 gi|121638465|ref|YP_978689.1| - 0.013 15.0 0.1 2.5 7.5 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) Lactamase_B PF00753.27 gi|121638466|ref|YP_978690.1| - 9.4e-28 97.6 3.9 2.2e-27 96.3 3.9 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121638466|ref|YP_978690.1| - 5.7e-06 26.0 0.2 1e-05 25.2 0.2 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|121638466|ref|YP_978690.1| - 0.0003 20.7 0.0 0.00047 20.1 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Pro_isomerase PF00160.21 gi|121638467|ref|YP_978691.1| - 7.2e-28 97.9 0.0 1.1e-27 97.3 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4064 PF13273.6 gi|121638467|ref|YP_978691.1| - 0.019 15.2 0.0 0.036 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) RskA PF10099.9 gi|121638467|ref|YP_978691.1| - 0.054 13.8 4.6 0.09 13.1 4.6 1.4 1 0 0 1 1 1 0 Anti-sigma-K factor rskA CnrY PF17524.2 gi|121638467|ref|YP_978691.1| - 0.054 13.7 0.5 0.1 12.8 0.5 1.4 1 0 0 1 1 1 0 Anti-sigma factor CnrY Sigma_reg_N PF13800.6 gi|121638467|ref|YP_978691.1| - 0.078 13.3 0.1 0.19 12.0 0.0 1.6 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF1345 PF07077.11 gi|121638467|ref|YP_978691.1| - 0.08 12.6 0.4 0.12 12.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) DUF3357 PF11837.8 gi|121638467|ref|YP_978691.1| - 0.099 13.1 0.4 0.21 12.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) DUF4519 PF15012.6 gi|121638467|ref|YP_978691.1| - 0.13 12.4 2.0 0.23 11.7 2.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) Wzy_C_2 PF11846.8 gi|121638467|ref|YP_978691.1| - 0.17 11.8 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal HD_4 PF13328.6 gi|121638468|ref|YP_978692.1| - 9.5e-47 158.6 1.6 2.9e-46 157.1 1.6 1.9 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 gi|121638468|ref|YP_978692.1| - 2.3e-37 127.9 0.0 4.5e-37 126.9 0.0 1.5 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins TGS PF02824.21 gi|121638468|ref|YP_978692.1| - 1.9e-23 82.2 0.0 4.7e-23 81.0 0.0 1.7 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 gi|121638468|ref|YP_978692.1| - 5.6e-17 62.1 0.0 1.2e-16 61.0 0.0 1.6 1 0 0 1 1 1 1 ACT domain HD PF01966.22 gi|121638468|ref|YP_978692.1| - 8.1e-14 51.9 0.4 2.6e-13 50.3 0.4 1.9 1 0 0 1 1 1 1 HD domain ACT PF01842.25 gi|121638468|ref|YP_978692.1| - 2.2e-12 46.5 0.2 2.2e-12 46.5 0.2 2.9 4 0 0 4 4 4 1 ACT domain Ub-Mut7C PF14451.6 gi|121638468|ref|YP_978692.1| - 0.4 10.6 2.2 0.59 10.0 0.1 2.5 3 0 0 3 3 3 0 Mut7-C ubiquitin DprA_WH PF17782.1 gi|121638468|ref|YP_978692.1| - 4.2 7.6 6.8 21 5.3 0.4 3.7 3 0 0 3 3 3 0 DprA winged helix domain Pribosyltran PF00156.27 gi|121638469|ref|YP_978693.1| - 9.6e-17 61.0 1.7 1.9e-16 60.0 1.7 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121638469|ref|YP_978693.1| - 0.027 13.9 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase SBP_bac_5 PF00496.22 gi|121638470|ref|YP_978694.1| - 4.4e-16 58.8 0.0 1.1e-15 57.6 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SecD_SecF PF02355.16 gi|121638471|ref|YP_978695.1| - 8e-64 214.5 9.9 1.2e-63 213.9 9.9 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|121638471|ref|YP_978695.1| - 2.2e-06 27.0 0.9 4.8e-06 25.9 0.9 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif SecD_SecF PF02355.16 gi|121638472|ref|YP_978696.1| - 3.1e-08 33.2 7.3 3.1e-08 33.2 7.3 1.4 2 0 0 2 2 2 1 Protein export membrane protein Sec_GG PF07549.14 gi|121638472|ref|YP_978696.1| - 0.00014 21.2 0.0 0.00044 19.6 0.0 1.8 1 0 0 1 1 1 1 SecD/SecF GG Motif MMPL PF03176.15 gi|121638472|ref|YP_978696.1| - 0.00036 19.6 18.7 0.00036 19.6 18.7 1.7 2 0 0 2 2 2 1 MMPL family ACR_tran PF00873.19 gi|121638472|ref|YP_978696.1| - 0.044 11.4 7.7 0.073 10.7 7.7 1.2 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF737 PF05300.11 gi|121638472|ref|YP_978696.1| - 1.2 9.5 3.4 1.9 8.8 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Reticulon PF02453.17 gi|121638472|ref|YP_978696.1| - 9.2 6.2 10.0 29 4.6 10.0 1.8 1 1 0 1 1 1 0 Reticulon YajC PF02699.15 gi|121638473|ref|YP_978697.1| - 9.5e-16 57.4 0.0 1.2e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Preprotein translocase subunit Tad PF13400.6 gi|121638473|ref|YP_978697.1| - 0.053 13.8 0.1 0.083 13.2 0.1 1.3 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like BRD4_CDT PF17105.5 gi|121638473|ref|YP_978697.1| - 0.059 13.0 0.8 0.15 11.7 0.8 1.6 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 Aminotran_3 PF00202.21 gi|121638474|ref|YP_978698.1| - 1.8e-132 441.9 0.0 2.2e-132 441.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III AMP-binding PF00501.28 gi|121638475|ref|YP_978699.1| - 1.3e-66 225.0 0.0 1.9e-66 224.4 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme NAD_binding_4 PF07993.12 gi|121638475|ref|YP_978699.1| - 3.7e-57 193.4 0.0 5.7e-57 192.8 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein PP-binding PF00550.25 gi|121638475|ref|YP_978699.1| - 4.2e-12 46.3 0.0 1.7e-11 44.3 0.1 2.1 2 0 0 2 2 2 1 Phosphopantetheine attachment site Epimerase PF01370.21 gi|121638475|ref|YP_978699.1| - 7.3e-09 35.4 0.0 1.3e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family AMP-binding_C PF13193.6 gi|121638475|ref|YP_978699.1| - 0.0028 18.6 0.0 0.012 16.5 0.0 2.2 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GDP_Man_Dehyd PF16363.5 gi|121638475|ref|YP_978699.1| - 0.082 12.3 0.0 5.4 6.3 0.0 2.1 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase PE PF00934.20 gi|121638476|ref|YP_978700.1| - 5.4e-33 113.2 20.2 8.5e-33 112.6 20.2 1.3 1 0 0 1 1 1 1 PE family T3SS_needle_E PF08988.10 gi|121638476|ref|YP_978700.1| - 0.21 11.7 0.1 0.36 11.0 0.1 1.3 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle RuvB_N PF05496.12 gi|121638477|ref|YP_978701.1| - 3.5e-74 247.8 0.1 7.2e-74 246.8 0.0 1.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_4 PF17864.1 gi|121638477|ref|YP_978701.1| - 5.1e-31 106.2 1.6 1e-30 105.3 1.6 1.6 1 0 0 1 1 1 1 RuvB AAA lid domain RuvB_C PF05491.13 gi|121638477|ref|YP_978701.1| - 9.2e-23 79.9 0.0 1.5e-22 79.2 0.0 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain AAA PF00004.29 gi|121638477|ref|YP_978701.1| - 8.9e-17 61.8 0.0 1.8e-16 60.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 gi|121638477|ref|YP_978701.1| - 2.7e-06 26.9 0.4 1.3e-05 24.6 0.0 1.9 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_5 PF07728.14 gi|121638477|ref|YP_978701.1| - 8.1e-06 25.9 0.5 0.0003 20.8 0.1 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|121638477|ref|YP_978701.1| - 1.8e-05 25.2 1.8 0.00021 21.7 0.1 2.7 2 1 1 3 3 3 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|121638477|ref|YP_978701.1| - 2.9e-05 23.6 0.4 0.034 13.5 0.0 2.7 1 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|121638477|ref|YP_978701.1| - 0.0011 18.7 0.0 1.6 8.4 0.0 2.4 1 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 gi|121638477|ref|YP_978701.1| - 0.0028 18.0 0.5 1.3 9.3 0.0 2.5 1 1 1 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|121638477|ref|YP_978701.1| - 0.004 17.5 0.0 0.0069 16.8 0.0 1.3 1 0 0 1 1 1 1 RNA helicase AAA_3 PF07726.11 gi|121638477|ref|YP_978701.1| - 0.0045 16.8 0.1 0.12 12.3 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|121638477|ref|YP_978701.1| - 0.0073 16.3 0.0 0.026 14.5 0.0 1.8 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|121638477|ref|YP_978701.1| - 0.016 14.5 0.1 0.024 13.9 0.1 1.2 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 gi|121638477|ref|YP_978701.1| - 0.023 14.4 4.5 0.089 12.5 0.2 3.3 2 2 1 3 3 3 0 IstB-like ATP binding protein AAA_14 PF13173.6 gi|121638477|ref|YP_978701.1| - 0.026 14.6 0.0 0.055 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|121638477|ref|YP_978701.1| - 0.03 14.2 0.2 0.41 10.5 0.0 2.5 2 1 1 3 3 3 0 NTPase ResIII PF04851.15 gi|121638477|ref|YP_978701.1| - 0.031 14.3 0.0 8.5 6.3 0.0 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit HTH_AsnC-type PF13404.6 gi|121638477|ref|YP_978701.1| - 0.061 13.2 0.2 0.36 10.7 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain AAA_18 PF13238.6 gi|121638477|ref|YP_978701.1| - 0.069 13.7 0.0 0.18 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain Resolvase PF00239.21 gi|121638477|ref|YP_978701.1| - 0.073 13.2 0.2 0.25 11.4 0.0 2.0 2 0 0 2 2 2 0 Resolvase, N terminal domain Rad17 PF03215.15 gi|121638477|ref|YP_978701.1| - 0.089 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain NACHT PF05729.12 gi|121638477|ref|YP_978701.1| - 0.12 12.2 0.0 0.31 10.9 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 gi|121638477|ref|YP_978701.1| - 0.14 12.4 0.5 2 8.7 0.1 2.2 1 1 1 2 2 2 0 AAA domain DUF815 PF05673.13 gi|121638477|ref|YP_978701.1| - 0.19 10.8 0.0 0.35 10.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RuvA_N PF01330.21 gi|121638478|ref|YP_978702.1| - 1.4e-20 73.1 0.0 4.1e-20 71.6 0.1 1.7 2 0 0 2 2 2 1 RuvA N terminal domain HHH_5 PF14520.6 gi|121638478|ref|YP_978702.1| - 2.2e-15 57.0 0.0 6.1e-15 55.6 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain RuvA_C PF07499.13 gi|121638478|ref|YP_978702.1| - 9.5e-11 42.0 0.8 2.4e-10 40.7 0.8 1.8 1 0 0 1 1 1 1 RuvA, C-terminal domain HHH PF00633.23 gi|121638478|ref|YP_978702.1| - 0.021 14.7 0.1 16 5.6 0.0 3.1 3 0 0 3 3 3 0 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|121638478|ref|YP_978702.1| - 0.064 13.5 0.0 2.4 8.5 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF2642 PF10842.8 gi|121638478|ref|YP_978702.1| - 0.11 12.3 0.1 0.21 11.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2642) RuvC PF02075.17 gi|121638479|ref|YP_978703.1| - 3e-62 208.9 1.2 3.7e-62 208.6 1.2 1.1 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC DUF4253 PF14062.6 gi|121638479|ref|YP_978703.1| - 0.068 13.3 3.1 0.22 11.7 0.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) MazE_antitoxin PF04014.18 gi|121638480|ref|YP_978704.1| - 2.5e-06 27.2 3.1 2e-05 24.4 1.6 2.1 1 1 1 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin MraZ PF02381.18 gi|121638480|ref|YP_978704.1| - 0.02 14.8 0.1 0.027 14.4 0.1 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Molydop_binding PF01568.21 gi|121638480|ref|YP_978704.1| - 0.14 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain PIN PF01850.21 gi|121638481|ref|YP_978705.1| - 4.7e-12 46.5 0.1 5.6e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 PIN domain DUF4178 PF13785.6 gi|121638482|ref|YP_978706.1| - 4.4e-30 104.7 1.0 5.3e-30 104.4 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4178) DUF2617 PF10936.8 gi|121638483|ref|YP_978707.1| - 6.8e-54 182.3 0.5 7.5e-54 182.1 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2617 DUF4247 PF14042.6 gi|121638484|ref|YP_978708.1| - 1.6e-32 112.8 0.1 1.9e-32 112.6 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4247) DUF350 PF03994.14 gi|121638485|ref|YP_978709.1| - 8.9e-12 45.0 6.0 1.1e-11 44.7 6.0 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF350) PGPGW PF09656.10 gi|121638485|ref|YP_978709.1| - 0.056 13.0 1.0 0.056 13.0 1.0 1.8 2 0 0 2 2 2 0 Putative transmembrane protein (PGPGW) DUF202 PF02656.15 gi|121638485|ref|YP_978709.1| - 0.24 11.9 4.7 0.39 11.2 4.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF350 PF03994.14 gi|121638486|ref|YP_978710.1| - 5.9e-11 42.3 7.0 6.5e-11 42.2 7.0 1.0 1 0 0 1 1 1 1 Domain of Unknown Function (DUF350) Spermine_synth PF01564.17 gi|121638487|ref|YP_978711.1| - 1.3e-31 109.4 0.0 2e-31 108.9 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_25 PF13649.6 gi|121638487|ref|YP_978711.1| - 2.4e-05 24.9 0.0 5.4e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638487|ref|YP_978711.1| - 0.0022 18.6 0.0 0.0051 17.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638487|ref|YP_978711.1| - 0.09 13.5 0.0 0.19 12.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain RHH_5 PF07878.11 gi|121638488|ref|YP_978712.1| - 0.018 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 CopG_antitoxin PF12441.8 gi|121638488|ref|YP_978712.1| - 0.068 13.7 1.1 0.087 13.4 0.0 1.7 2 0 0 2 2 2 0 CopG antitoxin of type II toxin-antitoxin system PIN PF01850.21 gi|121638489|ref|YP_978713.1| - 1.2e-12 48.4 0.0 1.4e-12 48.2 0.0 1.1 1 0 0 1 1 1 1 PIN domain Transcrip_reg PF01709.20 gi|121638490|ref|YP_978714.1| - 4.1e-88 294.9 0.0 4.6e-88 294.7 0.0 1.0 1 0 0 1 1 1 1 Transcriptional regulator SNO PF01174.19 gi|121638491|ref|YP_978715.1| - 1.7e-58 197.6 0.0 1.9e-58 197.4 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|121638491|ref|YP_978715.1| - 2.6e-08 33.7 0.0 5.9e-08 32.5 0.0 1.5 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|121638491|ref|YP_978715.1| - 8.5e-05 22.3 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 Acyl_CoA_thio PF02551.15 gi|121638492|ref|YP_978716.1| - 5.2e-55 184.9 0.0 9.3e-48 161.4 0.0 3.0 2 1 0 2 2 2 2 Acyl-CoA thioesterase 4HBT_3 PF13622.6 gi|121638492|ref|YP_978716.1| - 2.7e-53 181.8 1.3 3.3e-53 181.5 1.3 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily SOR_SNZ PF01680.17 gi|121638493|ref|YP_978717.1| - 1.5e-106 354.8 3.3 1.9e-106 354.5 3.3 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|121638493|ref|YP_978717.1| - 4.6e-05 22.8 8.9 0.00018 20.9 1.1 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|121638493|ref|YP_978717.1| - 6.6e-05 22.2 0.0 0.029 13.5 0.0 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|121638493|ref|YP_978717.1| - 0.0001 21.9 0.5 0.0045 16.5 0.1 2.8 2 1 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|121638493|ref|YP_978717.1| - 0.0017 17.8 1.6 0.0017 17.8 1.6 1.8 2 0 0 2 2 2 1 Nitronate monooxygenase NanE PF04131.14 gi|121638493|ref|YP_978717.1| - 0.0049 16.1 1.5 0.023 13.9 0.1 2.5 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.18 gi|121638493|ref|YP_978717.1| - 0.0051 15.9 0.4 0.011 14.8 0.4 1.5 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|121638493|ref|YP_978717.1| - 0.029 13.5 0.4 0.048 12.8 0.4 1.3 1 0 0 1 1 1 0 Conserved region in glutamate synthase IGPS PF00218.21 gi|121638493|ref|YP_978717.1| - 0.032 13.4 0.0 0.27 10.3 0.0 2.1 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase TetR_C_27 PF17935.1 gi|121638493|ref|YP_978717.1| - 0.12 12.4 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Putative_PNPOx PF01243.20 gi|121638494|ref|YP_978718.1| - 3.6e-16 59.1 0.0 6e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase PNP_phzG_C PF10590.9 gi|121638494|ref|YP_978718.1| - 9.8e-14 51.2 1.0 2e-13 50.1 1.0 1.6 1 0 0 1 1 1 1 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PE-PPE PF08237.11 gi|121638495|ref|YP_978719.1| - 1.7e-77 260.1 0.6 1.7e-77 260.1 0.6 1.8 2 0 0 2 2 2 1 PE-PPE domain PPE PF00823.19 gi|121638495|ref|YP_978719.1| - 2.6e-59 199.8 28.9 2.7e-59 199.8 26.9 1.9 2 0 0 2 2 2 1 PPE family Pentapeptide_2 PF01469.18 gi|121638495|ref|YP_978719.1| - 7.7e-11 41.7 45.4 8.8e-06 25.5 22.7 2.6 1 1 1 2 2 2 2 Pentapeptide repeats (8 copies) NUDIX PF00293.28 gi|121638496|ref|YP_978720.1| - 5.2e-22 78.3 0.4 4.6e-21 75.2 0.2 2.1 2 0 0 2 2 2 1 NUDIX domain TPR_21 PF09976.9 gi|121638496|ref|YP_978720.1| - 0.051 13.3 2.6 0.082 12.6 2.6 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Glyco_trans_1_4 PF13692.6 gi|121638497|ref|YP_978721.1| - 4.2e-31 108.1 0.4 1e-30 106.9 0.2 1.8 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|121638497|ref|YP_978721.1| - 2e-28 99.0 0.0 3.2e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121638497|ref|YP_978721.1| - 2.6e-24 86.1 0.4 5.6e-24 85.1 0.4 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|121638497|ref|YP_978721.1| - 3.4e-12 47.1 3.1 3.4e-12 47.1 3.1 2.6 1 1 1 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|121638497|ref|YP_978721.1| - 7.8e-06 26.2 0.0 2e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|121638497|ref|YP_978721.1| - 0.00013 22.0 0.0 0.00024 21.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Lip_A_acyltrans PF03279.13 gi|121638498|ref|YP_978722.1| - 1.4e-101 339.6 0.0 1.7e-101 339.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase SUKH-4 PF14435.6 gi|121638498|ref|YP_978722.1| - 0.045 13.8 0.2 0.087 12.9 0.2 1.4 1 0 0 1 1 1 0 SUKH-4 immunity protein CDP-OH_P_transf PF01066.21 gi|121638499|ref|YP_978723.1| - 3.7e-10 40.4 2.1 3.7e-10 40.4 2.1 2.0 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF4229 PF14012.6 gi|121638499|ref|YP_978723.1| - 0.28 11.3 0.0 0.28 11.3 0.0 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF4229) HIT PF01230.23 gi|121638500|ref|YP_978724.1| - 6e-15 55.8 0.0 8.7e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|121638500|ref|YP_978724.1| - 1.4e-06 28.7 0.0 2.1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|121638500|ref|YP_978724.1| - 0.0017 18.2 0.0 0.0033 17.3 0.0 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 GalP_UDP_tr_C PF02744.17 gi|121638500|ref|YP_978724.1| - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain tRNA-synt_2b PF00587.25 gi|121638501|ref|YP_978725.1| - 2e-38 132.2 0.0 3.2e-38 131.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|121638501|ref|YP_978725.1| - 2.6e-15 56.4 0.1 5.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 gi|121638501|ref|YP_978725.1| - 1.2e-12 47.7 0.0 2.3e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DUF1839 PF08893.10 gi|121638501|ref|YP_978725.1| - 0.079 12.1 0.0 0.16 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1839) TIM PF00121.18 gi|121638502|ref|YP_978726.1| - 0.0008 18.8 0.0 0.00094 18.6 0.0 1.1 1 0 0 1 1 1 1 Triosephosphate isomerase PE PF00934.20 gi|121638504|ref|YP_978728.1| - 6.4e-14 52.0 11.0 9.2e-14 51.5 11.0 1.3 1 1 0 1 1 1 1 PE family FSA_C PF10479.9 gi|121638504|ref|YP_978728.1| - 0.58 8.2 5.4 0.62 8.1 5.4 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF1990 PF09348.10 gi|121638505|ref|YP_978729.1| - 2.5e-53 180.2 0.9 2.8e-53 180.1 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1990) DoxX PF07681.12 gi|121638506|ref|YP_978730.1| - 6.3e-06 26.7 4.1 6.3e-06 26.7 4.1 1.6 1 1 0 1 1 1 1 DoxX HTH_20 PF12840.7 gi|121638507|ref|YP_978731.1| - 4.5e-05 23.4 0.0 0.00012 22.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain FaeA PF04703.12 gi|121638507|ref|YP_978731.1| - 0.05 14.0 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 FaeA-like protein HTH_Crp_2 PF13545.6 gi|121638507|ref|YP_978731.1| - 0.13 12.3 0.1 0.42 10.6 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Cupin_2 PF07883.11 gi|121638508|ref|YP_978732.1| - 4.2e-05 23.2 1.2 9.2e-05 22.1 0.1 1.9 1 1 0 2 2 2 1 Cupin domain Cupin_3 PF05899.12 gi|121638508|ref|YP_978732.1| - 0.016 14.9 0.0 0.055 13.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF861) DUF4149 PF13664.6 gi|121638509|ref|YP_978733.1| - 2.8 8.3 11.2 0.11 12.8 5.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) HTH_20 PF12840.7 gi|121638510|ref|YP_978734.1| - 8.7e-09 35.3 0.1 2.4e-08 33.9 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121638510|ref|YP_978734.1| - 0.00018 21.2 0.0 0.00049 19.8 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|121638510|ref|YP_978734.1| - 0.00034 20.1 0.0 0.00079 18.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|121638510|ref|YP_978734.1| - 0.002 17.9 0.0 0.042 13.6 0.0 2.3 2 0 0 2 2 2 1 LexA DNA binding domain HTH_28 PF13518.6 gi|121638510|ref|YP_978734.1| - 0.0025 17.9 0.6 0.006 16.7 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_30 PF13556.6 gi|121638510|ref|YP_978734.1| - 0.0029 17.4 0.3 0.0059 16.4 0.0 1.7 2 0 0 2 2 1 1 PucR C-terminal helix-turn-helix domain HTH_11 PF08279.12 gi|121638510|ref|YP_978734.1| - 0.003 17.5 0.0 0.0051 16.7 0.0 1.4 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|121638510|ref|YP_978734.1| - 0.0037 17.1 1.1 0.021 14.7 0.1 2.4 1 1 0 2 2 2 1 MarR family FaeA PF04703.12 gi|121638510|ref|YP_978734.1| - 0.0074 16.6 0.0 0.014 15.8 0.0 1.4 1 0 0 1 1 1 1 FaeA-like protein GntR PF00392.21 gi|121638510|ref|YP_978734.1| - 0.0087 15.7 0.0 0.017 14.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 gi|121638510|ref|YP_978734.1| - 0.0087 15.9 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GerE PF00196.19 gi|121638510|ref|YP_978734.1| - 0.014 14.9 0.0 0.027 14.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_38 PF13936.6 gi|121638510|ref|YP_978734.1| - 0.016 15.0 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|121638510|ref|YP_978734.1| - 0.019 14.7 0.1 0.1 12.4 0.0 2.3 3 0 0 3 3 1 0 AsnC-type helix-turn-helix domain DUF742 PF05331.11 gi|121638510|ref|YP_978734.1| - 0.024 14.4 0.0 0.045 13.6 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF742) Sigma70_r4_2 PF08281.12 gi|121638510|ref|YP_978734.1| - 0.03 14.0 0.0 0.073 12.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|121638510|ref|YP_978734.1| - 0.031 14.1 0.0 0.084 12.7 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 gi|121638510|ref|YP_978734.1| - 0.043 13.8 0.1 0.11 12.6 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 gi|121638510|ref|YP_978734.1| - 0.045 13.2 0.0 0.1 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 FeoC PF09012.10 gi|121638510|ref|YP_978734.1| - 0.066 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator TrmB PF01978.19 gi|121638510|ref|YP_978734.1| - 0.078 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|121638510|ref|YP_978734.1| - 0.093 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_DeoR PF08220.12 gi|121638510|ref|YP_978734.1| - 0.12 12.1 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_40 PF14493.6 gi|121638510|ref|YP_978734.1| - 0.17 12.3 0.0 0.32 11.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Methyltransf_11 PF08241.12 gi|121638511|ref|YP_978735.1| - 3.1e-11 43.8 0.8 6.3e-10 39.6 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121638511|ref|YP_978735.1| - 2e-09 38.0 0.6 7.2e-09 36.2 0.1 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638511|ref|YP_978735.1| - 1.1e-05 25.4 0.0 1.7e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|121638511|ref|YP_978735.1| - 0.00099 19.0 0.1 0.0018 18.1 0.0 1.4 2 0 0 2 2 2 1 Hypothetical methyltransferase MTS PF05175.14 gi|121638511|ref|YP_978735.1| - 0.001 18.7 0.0 0.0016 18.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|121638511|ref|YP_978735.1| - 0.0018 19.0 0.2 0.0055 17.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638511|ref|YP_978735.1| - 0.0096 15.7 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|121638511|ref|YP_978735.1| - 0.011 14.9 0.0 0.017 14.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Usp PF00582.26 gi|121638512|ref|YP_978736.1| - 1.8e-47 161.4 8.0 9.7e-25 87.7 1.6 2.0 2 0 0 2 2 2 2 Universal stress protein family Usp PF00582.26 gi|121638513|ref|YP_978737.1| - 2.9e-25 89.4 8.8 8.7e-20 71.7 1.0 3.0 2 1 0 2 2 2 2 Universal stress protein family DUF374 PF04028.13 gi|121638513|ref|YP_978737.1| - 0.13 11.9 0.4 2.5 7.7 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF374) Peptidase_M50 PF02163.22 gi|121638514|ref|YP_978738.1| - 5.8e-16 58.5 6.7 8.3e-09 35.1 0.1 3.2 2 1 1 3 3 3 2 Peptidase family M50 CBS PF00571.28 gi|121638514|ref|YP_978738.1| - 1.5e-12 47.8 0.0 5.4e-07 30.0 0.1 2.4 2 0 0 2 2 2 2 CBS domain DUF3267 PF11667.8 gi|121638514|ref|YP_978738.1| - 0.023 15.0 0.5 0.023 15.0 0.5 2.4 2 1 1 3 3 3 0 Putative zincin peptidase CBS PF00571.28 gi|121638515|ref|YP_978739.1| - 9.6e-26 90.0 0.7 1.3e-11 44.7 0.1 2.1 2 0 0 2 2 2 2 CBS domain TraI_2 PF07514.11 gi|121638515|ref|YP_978739.1| - 0.11 11.4 0.0 0.24 10.3 0.0 1.5 1 1 1 2 2 2 0 Putative helicase DUF2048 PF09752.9 gi|121638516|ref|YP_978740.1| - 3.2e-05 23.2 0.0 0.041 13.0 0.1 2.1 2 0 0 2 2 2 2 Abhydrolase domain containing 18 Hydrolase_4 PF12146.8 gi|121638516|ref|YP_978740.1| - 0.015 14.6 0.0 0.084 12.1 0.0 1.9 1 1 1 2 2 2 0 Serine aminopeptidase, S33 baeRF_family2 PF18844.1 gi|121638518|ref|YP_978742.1| - 1.2e-43 148.7 0.8 1.2e-43 148.7 0.8 2.0 3 0 0 3 3 3 1 Bacterial archaeo-eukaryotic release factor family 2 baeRF_family10 PF18854.1 gi|121638518|ref|YP_978742.1| - 3.7e-12 46.7 0.1 1.2e-11 45.1 0.1 1.9 1 1 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|121638518|ref|YP_978742.1| - 4.2e-06 27.1 0.1 4.2e-06 27.1 0.1 2.9 3 0 0 3 3 3 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_3 PF03465.15 gi|121638518|ref|YP_978742.1| - 4.2e-05 24.0 0.0 0.001 19.5 0.0 2.7 3 1 0 3 3 3 1 eRF1 domain 3 baeRF_family3 PF18845.1 gi|121638518|ref|YP_978742.1| - 0.00011 22.5 0.3 0.00061 20.1 0.0 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 3 RisS_PPD PF16524.5 gi|121638518|ref|YP_978742.1| - 0.025 14.8 0.2 0.19 12.0 0.1 2.3 2 1 0 2 2 2 0 Periplasmic domain of Sensor histidine kinase RisS ROK PF00480.20 gi|121638518|ref|YP_978742.1| - 0.076 12.5 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 ROK family Archease PF01951.16 gi|121638519|ref|YP_978743.1| - 1.1e-19 71.0 0.0 1.7e-19 70.4 0.0 1.3 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) baeRF_family3 PF18845.1 gi|121638519|ref|YP_978743.1| - 0.16 12.3 0.1 0.23 11.7 0.1 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 3 RtcB PF01139.17 gi|121638520|ref|YP_978744.1| - 1.2e-147 492.4 0.0 1.4e-147 492.2 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB DUF1876 PF08962.11 gi|121638521|ref|YP_978745.1| - 4.6e-30 103.4 0.4 5.2e-30 103.2 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1876) TetR_C_16 PF17920.1 gi|121638521|ref|YP_978745.1| - 0.014 15.7 0.2 0.018 15.3 0.2 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain LPP20 PF02169.16 gi|121638521|ref|YP_978745.1| - 0.2 12.0 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 LPP20 lipoprotein Hemerythrin PF01814.23 gi|121638522|ref|YP_978746.1| - 7.5e-15 55.7 1.6 7.5e-15 55.7 1.6 1.4 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain PE PF00934.20 gi|121638523|ref|YP_978747.1| - 3.1e-34 117.2 16.8 4.6e-34 116.6 16.8 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121638523|ref|YP_978747.1| - 1.4 9.5 7.8 2.2 8.8 7.8 1.3 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm CPT PF07931.12 gi|121638525|ref|YP_978749.1| - 3.4e-70 235.4 0.0 3.9e-70 235.2 0.0 1.0 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_33 PF13671.6 gi|121638525|ref|YP_978749.1| - 0.0031 17.7 0.0 0.0099 16.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|121638525|ref|YP_978749.1| - 0.033 13.5 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Zeta_toxin PF06414.12 gi|121638525|ref|YP_978749.1| - 0.036 13.3 0.0 0.57 9.4 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin ATPase PF06745.13 gi|121638525|ref|YP_978749.1| - 0.097 12.0 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 KaiC AAA_16 PF13191.6 gi|121638525|ref|YP_978749.1| - 0.13 12.6 0.0 0.45 10.9 0.0 1.8 3 0 0 3 3 3 0 AAA ATPase domain RecA PF00154.21 gi|121638525|ref|YP_978749.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 recA bacterial DNA recombination protein TIP49 PF06068.13 gi|121638525|ref|YP_978749.1| - 0.19 10.9 0.0 0.28 10.4 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain SNARE_assoc PF09335.11 gi|121638526|ref|YP_978750.1| - 1.4e-18 67.5 5.1 1.4e-18 67.5 5.1 2.7 2 1 1 3 3 3 1 SNARE associated Golgi protein DUF2178 PF09946.9 gi|121638526|ref|YP_978750.1| - 0.069 13.3 0.2 0.069 13.3 0.2 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2178) ACP_PD PF04336.12 gi|121638526|ref|YP_978750.1| - 0.25 11.8 0.0 0.4 11.1 0.0 1.2 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase DUF5455 PF17537.2 gi|121638526|ref|YP_978750.1| - 0.33 11.4 5.4 2.3 8.7 0.0 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5455) STAS PF01740.21 gi|121638527|ref|YP_978751.1| - 7.7e-14 51.3 0.0 8.8e-14 51.1 0.0 1.1 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121638527|ref|YP_978751.1| - 3.8e-07 30.3 0.7 6e-07 29.7 0.4 1.5 1 1 0 1 1 1 1 STAS domain UPF0060 PF02694.15 gi|121638528|ref|YP_978752.1| - 1.1e-48 163.9 9.4 1.2e-48 163.8 9.4 1.0 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family Phage_holin_2_1 PF04971.12 gi|121638528|ref|YP_978752.1| - 0.02 14.9 0.5 0.02 14.9 0.5 2.2 1 1 1 2 2 2 0 Bacteriophage P21 holin S DUF4131 PF13567.6 gi|121638528|ref|YP_978752.1| - 0.57 9.8 8.3 4.1 7.0 4.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) HTH_5 PF01022.20 gi|121638529|ref|YP_978753.1| - 2.6e-17 62.4 0.0 4.3e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121638529|ref|YP_978753.1| - 3.3e-14 52.7 1.3 5.2e-14 52.0 0.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|121638529|ref|YP_978753.1| - 0.00015 21.2 0.0 0.00023 20.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|121638529|ref|YP_978753.1| - 0.00018 21.3 0.1 0.00027 20.8 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|121638529|ref|YP_978753.1| - 0.0002 21.5 0.0 0.00029 21.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|121638529|ref|YP_978753.1| - 0.00025 21.3 0.0 0.00036 20.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|121638529|ref|YP_978753.1| - 0.0015 18.4 0.0 0.0023 17.9 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|121638529|ref|YP_978753.1| - 0.0033 17.3 0.0 0.0049 16.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|121638529|ref|YP_978753.1| - 0.0039 17.1 0.0 0.0057 16.6 0.0 1.3 1 0 0 1 1 1 1 HTH domain RP-C PF03428.13 gi|121638529|ref|YP_978753.1| - 0.014 15.0 0.1 0.023 14.3 0.1 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain Fe_dep_repress PF01325.19 gi|121638529|ref|YP_978753.1| - 0.03 14.5 0.0 0.044 14.0 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|121638529|ref|YP_978753.1| - 0.043 14.3 0.0 0.15 12.6 0.0 1.8 1 1 1 2 2 2 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|121638529|ref|YP_978753.1| - 0.065 13.1 0.0 0.091 12.7 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|121638529|ref|YP_978753.1| - 0.068 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|121638529|ref|YP_978753.1| - 0.078 13.4 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|121638529|ref|YP_978753.1| - 0.21 12.0 0.0 0.35 11.3 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein Phage_X PF05155.15 gi|121638529|ref|YP_978753.1| - 0.22 12.0 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Phage X family Glyoxalase PF00903.25 gi|121638530|ref|YP_978754.1| - 9.4e-10 38.8 0.0 1.2e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|121638530|ref|YP_978754.1| - 0.00014 22.1 0.0 0.014 15.7 0.0 2.2 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|121638530|ref|YP_978754.1| - 0.00014 22.6 0.0 0.00018 22.2 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain FAM124 PF15067.6 gi|121638530|ref|YP_978754.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 FAM124 family HTH_5 PF01022.20 gi|121638531|ref|YP_978755.1| - 2.5e-19 68.9 0.1 3.5e-19 68.4 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121638531|ref|YP_978755.1| - 2.1e-13 50.1 0.5 4.3e-13 49.1 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121638531|ref|YP_978755.1| - 0.00076 19.3 0.5 0.0017 18.2 0.2 1.7 1 1 1 2 2 2 1 MarR family TrmB PF01978.19 gi|121638531|ref|YP_978755.1| - 0.002 18.0 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|121638531|ref|YP_978755.1| - 0.0049 17.2 0.0 0.009 16.3 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|121638531|ref|YP_978755.1| - 0.0058 16.8 0.0 0.015 15.5 0.0 1.6 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|121638531|ref|YP_978755.1| - 0.017 14.6 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|121638531|ref|YP_978755.1| - 0.088 12.8 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain SBF PF01758.16 gi|121638532|ref|YP_978756.1| - 5.3e-66 222.0 4.2 5.3e-66 222.0 4.2 2.0 2 0 0 2 2 2 1 Sodium Bile acid symporter family LMWPc PF01451.21 gi|121638532|ref|YP_978756.1| - 4.1e-20 72.6 0.0 6e-20 72.1 0.0 1.3 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase SBF_like PF13593.6 gi|121638532|ref|YP_978756.1| - 7e-10 38.7 2.3 1.1e-09 38.0 2.3 1.2 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Transposase_mut PF00872.18 gi|121638541|ref|YP_978765.1| - 9.2e-103 344.0 0.0 1.1e-102 343.8 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121638541|ref|YP_978765.1| - 1.1e-05 25.7 0.0 2.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain Clp_N PF02861.20 gi|121638542|ref|YP_978766.1| - 1.4e-19 69.9 6.5 8.4e-10 38.6 0.3 3.1 3 0 0 3 3 3 2 Clp amino terminal domain, pathogenicity island component PAS_10 PF13596.6 gi|121638542|ref|YP_978766.1| - 0.14 12.7 0.0 0.28 11.8 0.0 1.4 1 0 0 1 1 1 0 PAS domain Acetyltransf_1 PF00583.25 gi|121638544|ref|YP_978768.1| - 7e-17 61.7 0.0 8.5e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|121638544|ref|YP_978768.1| - 1.3e-15 57.5 0.0 1.6e-15 57.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121638544|ref|YP_978768.1| - 9e-10 38.9 0.0 1.4e-09 38.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|121638544|ref|YP_978768.1| - 2.6e-05 24.9 0.0 2.9e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121638544|ref|YP_978768.1| - 0.0012 18.8 0.0 0.0016 18.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 gi|121638544|ref|YP_978768.1| - 0.002 17.8 0.0 0.02 14.6 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|121638544|ref|YP_978768.1| - 0.0091 16.2 1.2 0.012 15.7 1.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 gi|121638544|ref|YP_978768.1| - 0.0093 15.8 0.0 3 7.7 0.0 2.1 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|121638544|ref|YP_978768.1| - 0.054 13.6 0.0 0.074 13.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|121638544|ref|YP_978768.1| - 0.11 12.6 0.0 1.1 9.4 0.0 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain AFG1_ATPase PF03969.16 gi|121638545|ref|YP_978769.1| - 5.4e-107 357.8 0.0 2.8e-72 243.6 0.0 2.0 1 1 1 2 2 2 2 AFG1-like ATPase MobB PF03205.14 gi|121638545|ref|YP_978769.1| - 0.16 11.9 0.0 0.56 10.1 0.0 1.8 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B RibD_C PF01872.17 gi|121638546|ref|YP_978770.1| - 3.7e-48 164.0 0.2 4.3e-48 163.8 0.2 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Abhydrolase_4 PF08386.10 gi|121638547|ref|YP_978771.1| - 6.6e-21 74.4 0.1 1.5e-20 73.2 0.1 1.6 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_1 PF00561.20 gi|121638547|ref|YP_978771.1| - 5.7e-15 55.6 0.0 1.2e-14 54.6 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121638547|ref|YP_978771.1| - 0.15 11.3 0.3 2.5 7.3 0.0 2.8 3 0 0 3 3 3 0 Serine aminopeptidase, S33 GT87 PF09594.10 gi|121638548|ref|YP_978772.1| - 1e-39 136.7 36.2 1e-39 136.7 36.2 1.9 2 0 0 2 2 2 1 Glycosyltransferase family 87 SelR PF01641.18 gi|121638549|ref|YP_978773.1| - 1.4e-52 176.9 0.0 1.6e-52 176.7 0.0 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|121638549|ref|YP_978773.1| - 0.0024 18.0 0.0 0.0035 17.5 0.0 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Endonuclease_7 PF02945.15 gi|121638549|ref|YP_978773.1| - 0.025 14.5 1.4 0.079 12.9 1.4 1.8 1 1 0 1 1 1 0 Recombination endonuclease VII zinc-ribbon_6 PF10005.9 gi|121638549|ref|YP_978773.1| - 0.033 14.9 1.0 0.69 10.6 1.0 2.2 1 1 1 2 2 2 0 zinc-ribbon domain GFA PF04828.14 gi|121638549|ref|YP_978773.1| - 0.039 14.3 1.5 1.6 9.2 0.2 2.4 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_10 PF10058.9 gi|121638549|ref|YP_978773.1| - 0.08 12.7 0.2 2.9 7.7 0.0 2.3 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Ribosomal_L37e PF01907.19 gi|121638549|ref|YP_978773.1| - 0.099 12.8 4.0 0.27 11.4 0.4 2.4 2 1 0 2 2 2 0 Ribosomal protein L37e Jas PF16135.5 gi|121638549|ref|YP_978773.1| - 0.11 12.7 0.7 0.5 10.6 0.0 2.1 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling DZR PF12773.7 gi|121638549|ref|YP_978773.1| - 0.38 10.8 3.9 1.3 9.1 2.2 2.4 1 1 2 3 3 3 0 Double zinc ribbon Methyltransf_25 PF13649.6 gi|121638550|ref|YP_978774.1| - 2.6e-15 56.9 0.0 5.8e-15 55.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638550|ref|YP_978774.1| - 2.2e-14 53.9 0.0 2.8e-13 50.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638550|ref|YP_978774.1| - 7.9e-14 51.7 0.0 9.9e-14 51.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638550|ref|YP_978774.1| - 6.9e-09 35.8 0.0 8.7e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638550|ref|YP_978774.1| - 7.1e-07 29.9 0.0 1.2e-06 29.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|121638550|ref|YP_978774.1| - 1.9e-05 24.4 0.0 4.3e-05 23.3 0.0 1.5 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) MTS PF05175.14 gi|121638550|ref|YP_978774.1| - 0.00025 20.7 0.0 0.00036 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 gi|121638550|ref|YP_978774.1| - 0.00073 19.3 0.0 0.001 18.8 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Ubie_methyltran PF01209.18 gi|121638550|ref|YP_978774.1| - 0.0031 16.9 0.0 0.0053 16.1 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 gi|121638550|ref|YP_978774.1| - 0.016 14.6 0.3 0.023 14.1 0.3 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|121638550|ref|YP_978774.1| - 0.025 14.0 0.0 0.034 13.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB DUF938 PF06080.12 gi|121638550|ref|YP_978774.1| - 0.18 11.5 0.0 0.57 9.9 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Chlor_dismutase PF06778.12 gi|121638551|ref|YP_978775.1| - 9.8e-73 243.9 0.0 1.2e-72 243.7 0.0 1.0 1 0 0 1 1 1 1 Chlorite dismutase GlcNAc_2-epim PF07221.11 gi|121638551|ref|YP_978775.1| - 0.086 12.1 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Amino_oxidase PF01593.24 gi|121638552|ref|YP_978776.1| - 3.5e-31 109.0 1.5 4.2e-31 108.7 1.5 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|121638552|ref|YP_978776.1| - 1.1e-13 51.2 0.0 3e-13 49.8 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|121638552|ref|YP_978776.1| - 1e-08 35.3 0.4 0.0007 19.6 0.1 2.7 3 0 0 3 3 3 2 FAD-NAD(P)-binding DAO PF01266.24 gi|121638552|ref|YP_978776.1| - 1.2e-07 31.7 0.8 2.3e-07 30.7 0.8 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121638552|ref|YP_978776.1| - 0.0019 17.5 0.0 0.033 13.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Rossmann-like PF10727.9 gi|121638552|ref|YP_978776.1| - 0.003 17.4 1.3 0.0061 16.4 0.2 2.0 2 0 0 2 2 2 1 Rossmann-like domain HOASN PF14515.6 gi|121638552|ref|YP_978776.1| - 4.1 7.8 5.8 3.6 8.0 0.4 3.2 3 0 0 3 3 3 0 Haem-oxygenase-associated N-terminal helices URO-D PF01208.17 gi|121638553|ref|YP_978777.1| - 4.3e-119 397.7 0.0 4.8e-119 397.6 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) ECH_1 PF00378.20 gi|121638554|ref|YP_978778.1| - 6.7e-40 137.0 0.0 8.9e-40 136.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121638554|ref|YP_978778.1| - 8.3e-16 58.4 0.0 1e-15 58.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF3000 PF11452.8 gi|121638555|ref|YP_978779.1| - 2.8e-73 245.2 0.1 3.3e-73 245.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3000) DNA_pol_A_exo1 PF01612.20 gi|121638556|ref|YP_978780.1| - 3.6e-31 108.2 0.0 4.7e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease DNA_pol_A_exoN PF18305.1 gi|121638556|ref|YP_978780.1| - 3.2e-25 88.2 4.0 3.2e-25 88.2 4.0 2.3 3 0 0 3 3 3 1 3' to 5' exonuclease C-terminal domain HRDC PF00570.23 gi|121638556|ref|YP_978780.1| - 2.2e-13 50.0 0.1 4.7e-13 48.9 0.1 1.6 1 0 0 1 1 1 1 HRDC domain DXP_synthase_N PF13292.6 gi|121638557|ref|YP_978781.1| - 8.8e-107 356.4 0.0 1.5e-106 355.6 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 gi|121638557|ref|YP_978781.1| - 4.5e-38 130.7 0.1 2.3e-37 128.4 0.0 2.1 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|121638557|ref|YP_978781.1| - 1.1e-26 93.1 0.2 3.7e-26 91.4 0.0 2.0 2 0 0 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 gi|121638557|ref|YP_978781.1| - 2.8e-06 27.2 0.0 3.2e-05 23.8 0.0 2.7 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|121638557|ref|YP_978781.1| - 0.0028 16.7 0.1 0.013 14.4 0.0 1.9 2 0 0 2 2 2 1 Dehydrogenase E1 component PFOR_II PF17147.4 gi|121638557|ref|YP_978781.1| - 0.0074 16.6 0.0 0.021 15.1 0.0 1.8 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Usp PF00582.26 gi|121638557|ref|YP_978781.1| - 0.041 14.4 0.6 0.58 10.7 0.0 2.9 3 0 0 3 3 3 0 Universal stress protein family Beta-Casp PF10996.8 gi|121638557|ref|YP_978781.1| - 0.15 12.3 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 Beta-Casp domain CBS PF00571.28 gi|121638558|ref|YP_978782.1| - 2.1e-09 37.7 0.8 0.00015 22.2 0.3 2.5 2 1 0 2 2 2 2 CBS domain CitMHS PF03600.16 gi|121638559|ref|YP_978783.1| - 4.8e-53 180.3 42.1 4.8e-53 180.3 42.1 2.0 1 1 1 2 2 2 2 Citrate transporter ArsB PF02040.15 gi|121638559|ref|YP_978783.1| - 1.7e-19 70.5 33.5 2.1e-19 70.2 33.5 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein Na_sulph_symp PF00939.19 gi|121638559|ref|YP_978783.1| - 4.7e-15 55.6 39.7 4.4e-08 32.6 17.6 2.0 2 0 0 2 2 2 2 Sodium:sulfate symporter transmembrane region NhaB PF06450.12 gi|121638559|ref|YP_978783.1| - 3.7e-06 26.1 23.9 1.5e-05 24.1 10.6 2.6 1 1 1 2 2 2 2 Bacterial Na+/H+ antiporter B (NhaB) GPI2 PF06432.11 gi|121638559|ref|YP_978783.1| - 8.8 5.7 11.7 95 2.3 10.6 3.3 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase CitMHS PF03600.16 gi|121638560|ref|YP_978784.1| - 3.4e-55 187.4 30.4 3.4e-55 187.4 30.4 1.6 1 1 1 2 2 2 1 Citrate transporter ArsB PF02040.15 gi|121638560|ref|YP_978784.1| - 2e-16 60.4 26.8 2.5e-16 60.0 26.8 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein NhaB PF06450.12 gi|121638560|ref|YP_978784.1| - 7.3e-09 35.0 6.5 7.3e-09 35.0 6.5 2.1 2 0 0 2 2 2 1 Bacterial Na+/H+ antiporter B (NhaB) Kinase-PPPase PF03618.14 gi|121638560|ref|YP_978784.1| - 0.12 12.2 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Kinase/pyrophosphorylase ABC2_membrane_3 PF12698.7 gi|121638562|ref|YP_978786.1| - 0.00028 20.1 15.5 0.00041 19.6 15.5 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|121638562|ref|YP_978786.1| - 0.0026 17.7 9.2 0.0026 17.7 9.2 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|121638562|ref|YP_978786.1| - 1.7 7.9 17.6 0.35 10.1 13.5 1.8 1 1 0 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|121638563|ref|YP_978787.1| - 7.7e-24 84.8 0.0 1.2e-23 84.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121638563|ref|YP_978787.1| - 9.3e-10 38.8 0.1 2.1e-07 31.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MeaB PF03308.16 gi|121638563|ref|YP_978787.1| - 0.0088 15.1 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB RecA PF00154.21 gi|121638563|ref|YP_978787.1| - 0.083 12.3 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein DUF4162 PF13732.6 gi|121638563|ref|YP_978787.1| - 0.16 12.7 0.0 0.58 10.9 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4162) AAA_29 PF13555.6 gi|121638563|ref|YP_978787.1| - 0.17 11.6 0.2 0.35 10.6 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain tRNA_U5-meth_tr PF05958.11 gi|121638564|ref|YP_978788.1| - 7.5e-08 31.7 0.0 1.4e-07 30.8 0.0 1.4 2 0 0 2 2 2 1 tRNA (Uracil-5-)-methyltransferase TRAM PF01938.20 gi|121638564|ref|YP_978788.1| - 5.7e-06 26.2 0.0 1.3e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 TRAM domain PCMT PF01135.19 gi|121638564|ref|YP_978788.1| - 0.011 15.5 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|121638564|ref|YP_978788.1| - 0.029 13.7 0.0 0.048 13.0 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CmcI PF04989.12 gi|121638564|ref|YP_978788.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Cephalosporin hydroxylase MTS PF05175.14 gi|121638564|ref|YP_978788.1| - 0.22 11.0 0.2 1.1 8.8 0.0 2.1 2 1 1 3 3 3 0 Methyltransferase small domain AA_permease_2 PF13520.6 gi|121638565|ref|YP_978789.1| - 1.6e-21 76.6 38.4 2.4e-21 76.1 38.4 1.1 1 0 0 1 1 1 1 Amino acid permease K_trans PF02705.16 gi|121638565|ref|YP_978789.1| - 0.00092 17.8 21.0 0.015 13.9 1.1 2.8 2 1 0 2 2 2 2 K+ potassium transporter TrkA_N PF02254.18 gi|121638566|ref|YP_978790.1| - 2e-25 89.3 0.3 3.5e-25 88.5 0.1 1.5 2 0 0 2 2 1 1 TrkA-N domain TrkA_C PF02080.21 gi|121638566|ref|YP_978790.1| - 6.5e-07 29.1 0.0 1.2e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 TrkA-C domain UDPG_MGDP_dh_N PF03721.14 gi|121638566|ref|YP_978790.1| - 0.00019 21.1 0.0 0.00032 20.3 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.27 gi|121638566|ref|YP_978790.1| - 0.00061 20.3 0.1 0.0013 19.3 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|121638566|ref|YP_978790.1| - 0.0027 17.6 0.1 0.0051 16.7 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|121638566|ref|YP_978790.1| - 0.0031 17.8 0.1 0.0056 16.9 0.1 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|121638566|ref|YP_978790.1| - 0.0067 17.0 0.2 0.021 15.4 0.1 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|121638566|ref|YP_978790.1| - 0.0088 15.4 0.3 0.012 14.9 0.3 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|121638566|ref|YP_978790.1| - 0.015 14.7 0.1 0.028 13.8 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 gi|121638566|ref|YP_978790.1| - 0.016 14.6 0.2 0.024 14.0 0.2 1.3 1 0 0 1 1 1 0 ThiF family Rossmann-like PF10727.9 gi|121638566|ref|YP_978790.1| - 0.021 14.7 0.5 0.06 13.2 0.2 1.9 2 0 0 2 2 2 0 Rossmann-like domain ApbA PF02558.16 gi|121638566|ref|YP_978790.1| - 0.03 13.9 0.1 0.052 13.2 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|121638566|ref|YP_978790.1| - 0.034 13.4 0.1 0.044 13.0 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|121638566|ref|YP_978790.1| - 0.038 14.4 0.1 0.074 13.5 0.1 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding XdhC_C PF13478.6 gi|121638566|ref|YP_978790.1| - 0.043 14.3 0.2 0.12 12.9 0.0 1.9 2 1 0 2 2 1 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 gi|121638566|ref|YP_978790.1| - 0.066 12.5 0.2 0.12 11.6 0.1 1.4 2 0 0 2 2 2 0 FAD binding domain Shikimate_DH PF01488.20 gi|121638566|ref|YP_978790.1| - 0.075 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DAO PF01266.24 gi|121638566|ref|YP_978790.1| - 0.16 11.5 2.8 0.4 10.2 2.7 1.9 1 1 0 1 1 1 0 FAD dependent oxidoreductase NmrA PF05368.13 gi|121638566|ref|YP_978790.1| - 0.17 11.4 0.2 0.25 10.9 0.2 1.2 1 0 0 1 1 1 0 NmrA-like family TrkA_N PF02254.18 gi|121638567|ref|YP_978791.1| - 1.3e-27 96.3 0.1 1.9e-27 95.8 0.1 1.2 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|121638567|ref|YP_978791.1| - 3.8e-11 42.7 0.8 2.3e-10 40.1 0.1 2.4 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_10 PF13460.6 gi|121638567|ref|YP_978791.1| - 7.5e-07 29.2 0.2 1.2e-06 28.5 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_7 PF13241.6 gi|121638567|ref|YP_978791.1| - 1e-05 25.9 0.1 1.9e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.17 gi|121638567|ref|YP_978791.1| - 1.8e-05 25.2 0.1 3.5e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|121638567|ref|YP_978791.1| - 2.4e-05 24.0 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 gi|121638567|ref|YP_978791.1| - 3.3e-05 24.0 0.0 6.8e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 gi|121638567|ref|YP_978791.1| - 0.00025 21.0 0.0 0.00035 20.5 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|121638567|ref|YP_978791.1| - 0.00039 20.7 0.1 0.00087 19.6 0.1 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|121638567|ref|YP_978791.1| - 0.0012 18.4 0.1 0.0016 17.9 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DAO PF01266.24 gi|121638567|ref|YP_978791.1| - 0.0036 16.9 0.2 0.0045 16.6 0.2 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|121638567|ref|YP_978791.1| - 0.011 15.8 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|121638567|ref|YP_978791.1| - 0.012 15.8 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox PF00070.27 gi|121638567|ref|YP_978791.1| - 0.012 16.1 0.1 0.022 15.3 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DapB_N PF01113.20 gi|121638567|ref|YP_978791.1| - 0.014 15.5 0.1 0.023 14.8 0.1 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pyr_redox_2 PF07992.14 gi|121638567|ref|YP_978791.1| - 0.02 14.1 0.0 0.025 13.8 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|121638567|ref|YP_978791.1| - 0.036 14.6 0.1 0.06 13.9 0.1 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 gi|121638567|ref|YP_978791.1| - 0.039 13.2 0.1 0.056 12.7 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Gp_dh_N PF00044.24 gi|121638567|ref|YP_978791.1| - 0.041 14.2 0.2 0.17 12.2 0.1 2.0 1 1 1 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|121638567|ref|YP_978791.1| - 0.053 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NmrA PF05368.13 gi|121638567|ref|YP_978791.1| - 0.12 12.0 0.0 0.21 11.1 0.0 1.4 1 1 0 1 1 1 0 NmrA-like family DAGK_cat PF00781.24 gi|121638567|ref|YP_978791.1| - 0.14 11.8 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain UDPG_MGDP_dh_N PF03721.14 gi|121638567|ref|YP_978791.1| - 0.16 11.5 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF3159 PF11361.8 gi|121638568|ref|YP_978792.1| - 4.9e-66 222.1 18.9 5.7e-66 221.9 18.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3159) RecG_wedge PF17191.4 gi|121638569|ref|YP_978793.1| - 8.4e-05 22.2 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 RecG wedge domain tRNA_anti-codon PF01336.25 gi|121638569|ref|YP_978793.1| - 0.0015 18.5 0.2 0.0021 18.0 0.2 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Abhydrolase_6 PF12697.7 gi|121638570|ref|YP_978794.1| - 3.8e-06 27.7 17.9 5.3e-06 27.2 17.9 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121638570|ref|YP_978794.1| - 2.8e-05 23.5 0.3 4.3e-05 22.9 0.3 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 gi|121638570|ref|YP_978794.1| - 0.00032 20.6 1.4 0.00044 20.2 1.4 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 gi|121638570|ref|YP_978794.1| - 0.00038 20.6 0.4 0.00064 19.9 0.4 1.4 1 1 0 1 1 1 1 Thioesterase domain Abhydrolase_1 PF00561.20 gi|121638570|ref|YP_978794.1| - 0.00041 20.1 0.3 0.0015 18.3 0.1 1.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold Patatin PF01734.22 gi|121638570|ref|YP_978794.1| - 0.098 12.8 2.6 0.15 12.2 2.6 1.3 1 1 0 1 1 1 0 Patatin-like phospholipase DUF1823 PF08853.11 gi|121638570|ref|YP_978794.1| - 0.11 12.7 0.1 0.19 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1823) DUF3710 PF12502.8 gi|121638571|ref|YP_978795.1| - 1.6e-54 184.2 0.6 2.4e-54 183.7 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3710) RHH_1 PF01402.21 gi|121638571|ref|YP_978795.1| - 0.051 13.5 0.1 1.2 9.2 0.0 2.7 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family dUTPase PF00692.19 gi|121638572|ref|YP_978796.1| - 7.8e-28 96.7 0.0 1e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 dUTPase DUF3093 PF11292.8 gi|121638573|ref|YP_978797.1| - 8e-51 172.0 10.1 9e-51 171.8 10.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3093) DUF4175 PF13779.6 gi|121638573|ref|YP_978797.1| - 5.4 4.8 7.9 6.1 4.6 7.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) DUF4193 PF13834.6 gi|121638574|ref|YP_978798.1| - 1.6e-44 150.4 2.6 1.7e-44 150.3 2.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4193) ArfGap PF01412.18 gi|121638574|ref|YP_978798.1| - 0.0026 17.8 0.4 0.073 13.1 0.4 2.0 2 0 0 2 2 2 2 Putative GTPase activating protein for Arf LytR_C PF13399.6 gi|121638575|ref|YP_978799.1| - 3.4e-14 53.6 0.0 5.4e-14 53.0 0.0 1.3 1 0 0 1 1 1 1 LytR cell envelope-related transcriptional attenuator Inositol_P PF00459.25 gi|121638576|ref|YP_978800.1| - 1.7e-62 211.4 0.2 2.1e-62 211.1 0.2 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family ROK PF00480.20 gi|121638577|ref|YP_978801.1| - 5.9e-16 58.8 4.7 3.6e-13 49.7 2.3 2.6 1 1 1 2 2 2 2 ROK family Sigma70_r3 PF04539.16 gi|121638578|ref|YP_978802.1| - 2e-28 98.3 0.9 2e-28 98.3 0.9 3.7 4 0 0 4 4 4 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 gi|121638578|ref|YP_978802.1| - 6.2e-23 80.4 0.4 2.2e-22 78.6 0.3 2.0 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121638578|ref|YP_978802.1| - 4.6e-21 74.1 3.2 1.2e-18 66.4 0.4 2.9 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 gi|121638578|ref|YP_978802.1| - 1.5e-16 60.1 0.4 5.3e-16 58.3 0.4 2.0 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 Ribonuc_L-PSP PF01042.21 gi|121638579|ref|YP_978803.1| - 9.1e-27 93.5 0.1 1.1e-26 93.2 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF952 PF06108.12 gi|121638580|ref|YP_978804.1| - 4.9e-26 90.6 0.0 5.7e-26 90.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF952) Virul_fac_BrkB PF03631.15 gi|121638582|ref|YP_978806.1| - 4.7e-45 154.2 17.7 5.5e-45 154.0 17.7 1.0 1 0 0 1 1 1 1 Virulence factor BrkB Sh_2 PF17512.2 gi|121638582|ref|YP_978806.1| - 0.82 9.4 2.2 0.9 9.3 0.2 1.8 2 0 0 2 2 2 0 Metapneumovirus Small hydrophobic protein DUF3039 PF11238.8 gi|121638583|ref|YP_978807.1| - 2.5e-28 97.6 0.4 3e-28 97.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3039) ADK_lid PF05191.14 gi|121638583|ref|YP_978807.1| - 0.017 15.1 0.8 0.29 11.1 0.0 2.8 3 0 0 3 3 3 0 Adenylate kinase, active site lid DUF3099 PF11298.8 gi|121638584|ref|YP_978808.1| - 5.3e-27 93.7 3.4 7.9e-27 93.2 3.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3099) Sigma70_r3 PF04539.16 gi|121638585|ref|YP_978809.1| - 3e-26 91.3 1.5 1.7e-25 88.9 0.9 2.4 1 1 2 3 3 3 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 gi|121638585|ref|YP_978809.1| - 3e-22 78.2 0.2 7.9e-22 76.8 0.0 1.8 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|121638585|ref|YP_978809.1| - 1.1e-19 69.7 2.9 2.8e-19 68.3 0.8 2.6 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 gi|121638585|ref|YP_978809.1| - 2.6e-12 46.5 0.0 7.9e-12 45.0 0.0 1.9 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 HTH_15 PF12324.8 gi|121638585|ref|YP_978809.1| - 0.003 17.5 0.0 4 7.5 0.0 2.8 2 0 0 2 2 2 2 Helix-turn-helix domain of alkylmercury lyase Fe_dep_repr_C PF02742.15 gi|121638586|ref|YP_978810.1| - 1.3e-29 102.1 0.0 2.7e-29 101.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|121638586|ref|YP_978810.1| - 1e-21 76.9 0.1 3.7e-21 75.1 0.0 1.9 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|121638586|ref|YP_978810.1| - 2.2e-09 37.4 2.3 2.3e-09 37.4 0.3 2.1 2 0 0 2 2 2 1 FeoA domain HTH_27 PF13463.6 gi|121638586|ref|YP_978810.1| - 1.8e-05 25.2 1.0 0.00029 21.2 0.3 2.6 2 1 1 3 3 3 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|121638586|ref|YP_978810.1| - 6.7e-05 22.7 0.5 0.00027 20.8 0.1 2.2 3 0 0 3 3 3 1 MarR family HTH_24 PF13412.6 gi|121638586|ref|YP_978810.1| - 0.0002 20.8 0.1 0.00092 18.7 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|121638586|ref|YP_978810.1| - 0.0013 18.6 0.2 0.011 15.7 0.2 2.5 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HemN_C PF06969.16 gi|121638586|ref|YP_978810.1| - 0.005 16.9 0.1 0.012 15.7 0.1 1.7 1 0 0 1 1 1 1 HemN C-terminal domain MarR PF01047.22 gi|121638586|ref|YP_978810.1| - 0.0052 16.7 0.0 0.014 15.3 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_1 PF00126.27 gi|121638586|ref|YP_978810.1| - 0.039 13.9 0.2 0.14 12.2 0.2 2.0 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 gi|121638586|ref|YP_978810.1| - 0.046 13.8 0.1 0.12 12.4 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4192 PF13830.6 gi|121638587|ref|YP_978811.1| - 2.1e-85 287.6 34.4 2.4e-85 287.4 34.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) Pyr_redox_2 PF07992.14 gi|121638588|ref|YP_978812.1| - 1.6e-56 191.7 3.2 2e-56 191.4 3.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|121638588|ref|YP_978812.1| - 8.1e-27 93.7 0.1 2.1e-25 89.1 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|121638588|ref|YP_978812.1| - 6.2e-22 77.9 8.8 1.1e-18 67.6 0.4 2.7 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121638588|ref|YP_978812.1| - 1e-11 44.7 3.8 5.1e-08 32.5 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121638588|ref|YP_978812.1| - 2.1e-11 43.9 5.7 6.8e-11 42.2 0.7 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|121638588|ref|YP_978812.1| - 1.1e-08 34.6 4.3 6e-05 22.3 2.3 3.0 3 1 0 3 3 3 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|121638588|ref|YP_978812.1| - 2.5e-07 30.2 1.8 0.00069 19.0 0.1 2.6 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 gi|121638588|ref|YP_978812.1| - 5.3e-07 29.8 2.5 0.0039 17.4 0.3 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|121638588|ref|YP_978812.1| - 1.4e-06 27.3 7.4 0.0034 16.2 1.6 3.6 4 0 0 4 4 4 3 HI0933-like protein DAO PF01266.24 gi|121638588|ref|YP_978812.1| - 2.4e-06 27.4 10.1 0.058 13.0 0.1 3.4 3 1 0 3 3 3 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121638588|ref|YP_978812.1| - 3.7e-05 23.0 12.5 0.00014 21.1 3.4 3.3 4 0 0 4 4 4 2 FAD binding domain FAD_binding_3 PF01494.19 gi|121638588|ref|YP_978812.1| - 0.00043 19.6 6.2 0.21 10.8 0.5 3.2 3 1 1 4 4 4 2 FAD binding domain Thi4 PF01946.17 gi|121638588|ref|YP_978812.1| - 0.00061 19.1 5.3 0.03 13.6 1.2 2.6 2 1 0 2 2 2 2 Thi4 family 3HCDH_N PF02737.18 gi|121638588|ref|YP_978812.1| - 0.00065 19.6 5.4 0.0012 18.8 0.1 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|121638588|ref|YP_978812.1| - 0.0026 18.3 0.2 0.038 14.5 0.1 2.4 2 0 0 2 2 2 1 XdhC Rossmann domain K_oxygenase PF13434.6 gi|121638588|ref|YP_978812.1| - 0.003 16.8 0.1 0.016 14.4 0.0 2.1 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) ThiF PF00899.21 gi|121638588|ref|YP_978812.1| - 0.0042 16.5 0.0 0.0094 15.3 0.0 1.5 1 0 0 1 1 1 1 ThiF family 2-Hacid_dh_C PF02826.19 gi|121638588|ref|YP_978812.1| - 0.012 15.0 0.3 0.046 13.1 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|121638588|ref|YP_978812.1| - 0.018 15.3 0.8 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|121638588|ref|YP_978812.1| - 0.02 14.5 4.6 0.031 13.8 0.3 2.8 2 2 2 4 4 4 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|121638588|ref|YP_978812.1| - 0.053 14.0 0.6 0.39 11.2 0.1 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 gi|121638588|ref|YP_978812.1| - 0.23 10.5 5.8 3.8 6.5 0.8 3.0 3 0 0 3 3 3 0 Lycopene cyclase protein PAC2 PF09754.9 gi|121638589|ref|YP_978813.1| - 9.2e-47 159.8 0.1 1.1e-46 159.5 0.1 1.1 1 0 0 1 1 1 1 PAC2 family Abhydrolase_1 PF00561.20 gi|121638590|ref|YP_978814.1| - 1.9e-28 99.8 0.3 4.8e-23 82.1 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121638590|ref|YP_978814.1| - 6.2e-26 92.4 5.4 8.9e-26 91.9 5.4 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121638590|ref|YP_978814.1| - 5.9e-17 61.7 0.4 1e-16 61.0 0.4 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|121638590|ref|YP_978814.1| - 1.1e-05 25.2 0.0 0.23 11.0 0.0 3.1 2 1 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 gi|121638590|ref|YP_978814.1| - 0.00037 20.3 0.0 0.064 13.0 0.0 2.3 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|121638590|ref|YP_978814.1| - 0.00055 19.8 2.2 8.4 6.1 0.1 3.2 2 1 0 3 3 3 2 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 gi|121638590|ref|YP_978814.1| - 0.0013 18.9 0.0 0.39 10.8 0.0 2.3 2 0 0 2 2 2 1 TAP-like protein Lipase_3 PF01764.25 gi|121638590|ref|YP_978814.1| - 0.0019 18.1 0.0 0.0032 17.3 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Ndr PF03096.14 gi|121638590|ref|YP_978814.1| - 0.0038 16.0 0.0 0.0059 15.3 0.0 1.2 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 gi|121638590|ref|YP_978814.1| - 0.0078 16.1 0.1 0.023 14.6 0.0 1.8 2 0 0 2 2 2 1 Serine hydrolase Esterase PF00756.20 gi|121638590|ref|YP_978814.1| - 0.011 15.4 0.1 0.051 13.2 0.0 1.9 1 1 0 2 2 2 0 Putative esterase Chlorophyllase2 PF12740.7 gi|121638590|ref|YP_978814.1| - 0.012 14.5 0.0 0.021 13.7 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme PGAP1 PF07819.13 gi|121638590|ref|YP_978814.1| - 0.014 15.1 0.2 0.049 13.3 0.1 1.8 1 1 1 2 2 2 0 PGAP1-like protein DUF900 PF05990.12 gi|121638590|ref|YP_978814.1| - 0.023 14.2 0.0 0.038 13.5 0.0 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) DUF1057 PF06342.12 gi|121638590|ref|YP_978814.1| - 0.044 12.8 0.0 0.072 12.1 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Thioesterase PF00975.20 gi|121638590|ref|YP_978814.1| - 0.047 13.8 0.0 0.07 13.2 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Peptidase_S9 PF00326.21 gi|121638590|ref|YP_978814.1| - 0.062 12.8 0.1 4.7 6.6 0.0 3.2 4 0 0 4 4 4 0 Prolyl oligopeptidase family Chlorophyllase PF07224.11 gi|121638590|ref|YP_978814.1| - 0.081 11.9 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase DUF915 PF06028.11 gi|121638590|ref|YP_978814.1| - 0.13 11.5 0.0 0.26 10.6 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Hyaluronidase_1 PF07212.11 gi|121638590|ref|YP_978814.1| - 0.21 10.8 0.0 0.3 10.3 0.0 1.2 1 0 0 1 1 1 0 Hyaluronidase protein (HylP) PhzC-PhzF PF02567.16 gi|121638591|ref|YP_978815.1| - 5.5e-23 81.8 0.0 2.4e-14 53.5 0.0 2.0 1 1 1 2 2 2 2 Phenazine biosynthesis-like protein DUF1794 PF08768.11 gi|121638592|ref|YP_978816.1| - 2.5e-43 147.6 0.0 2.8e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) ATP-cone PF03477.16 gi|121638593|ref|YP_978817.1| - 5e-14 52.6 0.0 7.1e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 ATP cone domain TF_Zn_Ribbon PF08271.12 gi|121638593|ref|YP_978817.1| - 0.031 13.8 3.6 0.72 9.4 0.1 2.5 3 0 0 3 3 3 0 TFIIB zinc-binding Cys_rich_CPXG PF14255.6 gi|121638593|ref|YP_978817.1| - 0.064 13.2 0.8 2 8.4 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-ribbon_3 PF13248.6 gi|121638593|ref|YP_978817.1| - 0.11 12.0 1.0 5.3 6.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_4 PF13894.6 gi|121638593|ref|YP_978817.1| - 0.68 10.9 5.4 1 10.4 0.1 3.1 3 1 0 3 3 3 0 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 gi|121638593|ref|YP_978817.1| - 3 7.9 6.4 9.9 6.2 6.5 1.8 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Ogr_Delta PF04606.12 gi|121638593|ref|YP_978817.1| - 4.4 7.4 6.0 34 4.5 6.0 2.3 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger LysM PF01476.20 gi|121638594|ref|YP_978818.1| - 3.2e-07 30.3 0.0 4.9e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 LysM domain LexA_DNA_bind PF01726.16 gi|121638595|ref|YP_978819.1| - 5e-30 103.1 0.1 7.7e-30 102.5 0.1 1.3 1 0 0 1 1 1 1 LexA DNA binding domain Peptidase_S24 PF00717.23 gi|121638595|ref|YP_978819.1| - 1.3e-15 57.1 0.0 1.9e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like HTH_IclR PF09339.10 gi|121638595|ref|YP_978819.1| - 0.00067 19.4 0.1 0.0015 18.3 0.1 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|121638595|ref|YP_978819.1| - 0.00073 20.0 0.0 0.0012 19.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|121638595|ref|YP_978819.1| - 0.002 18.0 0.7 0.0037 17.1 0.3 1.6 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|121638595|ref|YP_978819.1| - 0.0076 16.2 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|121638595|ref|YP_978819.1| - 0.019 15.0 0.1 0.1 12.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Pollen_allerg_1 PF01357.21 gi|121638595|ref|YP_978819.1| - 0.026 14.6 0.0 0.046 13.7 0.0 1.3 1 0 0 1 1 1 0 Pollen allergen HTH_Crp_2 PF13545.6 gi|121638595|ref|YP_978819.1| - 0.04 13.9 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|121638595|ref|YP_978819.1| - 0.041 13.4 0.1 0.09 12.4 0.1 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_6 PF01418.17 gi|121638595|ref|YP_978819.1| - 0.097 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family Sigma70_r4 PF04545.16 gi|121638595|ref|YP_978819.1| - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 FaeA PF04703.12 gi|121638595|ref|YP_978819.1| - 0.2 12.1 0.0 0.36 11.3 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein CobN-Mg_chel PF02514.16 gi|121638595|ref|YP_978819.1| - 0.22 9.2 0.0 0.29 8.8 0.0 1.0 1 0 0 1 1 1 0 CobN/Magnesium Chelatase LGFP PF08310.11 gi|121638596|ref|YP_978820.1| - 2.5e-50 168.8 24.3 1e-09 38.7 0.1 7.7 7 1 0 7 7 7 6 LGFP repeat DUF4381 PF14316.6 gi|121638596|ref|YP_978820.1| - 0.12 12.6 0.5 0.24 11.6 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF723 PF05265.13 gi|121638596|ref|YP_978820.1| - 0.22 11.5 0.0 19 5.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF723) TerC PF03741.16 gi|121638598|ref|YP_978822.1| - 1.6e-43 148.5 9.5 1.6e-43 148.5 9.5 2.2 3 0 0 3 3 3 1 Integral membrane protein TerC family DUF4381 PF14316.6 gi|121638598|ref|YP_978822.1| - 0.77 10.0 3.0 0.69 10.1 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Acyl-CoA_dh_1 PF00441.24 gi|121638599|ref|YP_978823.1| - 1.1e-46 158.7 2.5 1.6e-46 158.2 2.5 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121638599|ref|YP_978823.1| - 3.1e-31 108.4 0.1 1.2e-30 106.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121638599|ref|YP_978823.1| - 2e-24 85.6 0.0 3.4e-24 84.9 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121638599|ref|YP_978823.1| - 2.7e-08 34.2 0.3 3.8e-08 33.7 0.3 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|121638599|ref|YP_978823.1| - 0.0017 18.9 0.0 0.014 16.0 0.0 2.1 2 0 0 2 2 2 1 Acyl-coenzyme A oxidase N-terminal GTP-bdg_N PF13167.6 gi|121638600|ref|YP_978824.1| - 7.4e-33 113.1 0.0 1.5e-32 112.1 0.0 1.5 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 gi|121638600|ref|YP_978824.1| - 7.7e-30 103.3 10.0 1.5e-29 102.4 7.1 2.5 2 1 0 2 2 2 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 gi|121638600|ref|YP_978824.1| - 3e-21 75.6 0.0 5.8e-21 74.7 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 gi|121638600|ref|YP_978824.1| - 6.7e-06 26.3 0.0 1.3e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 Dynamin family FeoB_N PF02421.18 gi|121638600|ref|YP_978824.1| - 6.6e-05 22.5 0.0 0.0002 20.9 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B DAO PF01266.24 gi|121638600|ref|YP_978824.1| - 0.00084 19.0 0.2 0.0014 18.2 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase MMR_HSR1_Xtn PF16897.5 gi|121638600|ref|YP_978824.1| - 0.0013 18.8 0.0 0.0024 17.9 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 gi|121638600|ref|YP_978824.1| - 0.0031 17.4 0.0 0.21 11.5 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase Arf PF00025.21 gi|121638600|ref|YP_978824.1| - 0.017 14.5 0.0 1.5 8.2 0.0 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_16 PF13191.6 gi|121638600|ref|YP_978824.1| - 0.018 15.4 1.4 0.059 13.8 0.1 2.5 1 1 2 3 3 3 0 AAA ATPase domain cobW PF02492.19 gi|121638600|ref|YP_978824.1| - 0.024 14.3 3.5 0.61 9.7 0.1 3.3 2 2 2 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 gi|121638600|ref|YP_978824.1| - 0.048 14.2 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|121638600|ref|YP_978824.1| - 0.056 12.9 0.0 0.094 12.1 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 gi|121638600|ref|YP_978824.1| - 0.074 12.6 0.3 15 5.1 0.0 2.6 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 gi|121638600|ref|YP_978824.1| - 0.11 13.1 0.4 0.31 11.6 0.2 1.8 1 1 0 1 1 1 0 ABC transporter IIGP PF05049.13 gi|121638600|ref|YP_978824.1| - 0.24 10.4 0.0 0.36 9.8 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) DAP_epimerase PF01678.19 gi|121638601|ref|YP_978825.1| - 1e-63 212.9 5.0 1.8e-42 144.4 0.3 2.1 2 0 0 2 2 2 2 Diaminopimelate epimerase IPPT PF01715.17 gi|121638602|ref|YP_978826.1| - 6.3e-70 235.5 0.0 7.5e-70 235.3 0.0 1.0 1 0 0 1 1 1 1 IPP transferase AAA_33 PF13671.6 gi|121638602|ref|YP_978826.1| - 0.00025 21.2 0.8 0.0067 16.6 0.7 2.6 1 1 0 1 1 1 1 AAA domain IPT PF01745.16 gi|121638602|ref|YP_978826.1| - 0.0038 16.6 0.0 0.0057 16.1 0.0 1.3 1 0 0 1 1 1 1 Isopentenyl transferase AAA_5 PF07728.14 gi|121638602|ref|YP_978826.1| - 0.014 15.4 0.0 0.029 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Cytidylate_kin PF02224.18 gi|121638602|ref|YP_978826.1| - 0.022 14.5 1.6 0.049 13.4 0.4 2.2 1 1 1 2 2 2 0 Cytidylate kinase AAA PF00004.29 gi|121638602|ref|YP_978826.1| - 0.084 13.3 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|121638602|ref|YP_978826.1| - 0.1 13.2 0.0 0.74 10.4 0.0 2.2 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|121638602|ref|YP_978826.1| - 0.14 12.4 0.0 0.3 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain EamA PF00892.20 gi|121638604|ref|YP_978828.1| - 0.00018 21.7 27.2 0.0085 16.3 4.3 4.3 2 2 2 4 4 4 4 EamA-like transporter family PA PF02225.22 gi|121638604|ref|YP_978828.1| - 0.029 14.4 0.2 0.029 14.4 0.2 2.0 2 0 0 2 2 2 0 PA domain DUF349 PF03993.12 gi|121638606|ref|YP_978830.1| - 8e-44 147.8 33.7 4.1e-19 68.7 2.5 4.7 3 1 0 4 4 4 3 Domain of Unknown Function (DUF349) UPF0139 PF03669.13 gi|121638607|ref|YP_978831.1| - 2.8 7.9 3.9 16 5.4 4.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0139) Radical_SAM PF04055.21 gi|121638608|ref|YP_978832.1| - 1.2e-30 107.1 0.0 2e-30 106.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.20 gi|121638608|ref|YP_978832.1| - 9.1e-29 99.4 0.0 1.8e-28 98.5 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 B12-binding PF02310.19 gi|121638608|ref|YP_978832.1| - 0.0035 17.4 0.0 0.013 15.5 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain TRAM PF01938.20 gi|121638608|ref|YP_978832.1| - 0.035 14.1 0.1 0.086 12.8 0.1 1.7 1 0 0 1 1 1 0 TRAM domain TRAM_2 PF18693.1 gi|121638608|ref|YP_978832.1| - 0.053 13.7 0.1 0.15 12.2 0.1 1.9 1 0 0 1 1 1 0 TRAM domain DUF5131 PF07505.11 gi|121638609|ref|YP_978833.1| - 8.9e-97 323.4 0.0 1e-96 323.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF5131) RecX PF02631.16 gi|121638611|ref|YP_978835.1| - 4.4e-25 88.5 1.5 1.8e-23 83.3 0.2 1.8 1 1 1 2 2 2 2 RecX family RecA PF00154.21 gi|121638612|ref|YP_978836.1| - 2.1e-136 453.6 1.7 6.4e-131 435.6 1.9 2.3 2 0 0 2 2 2 2 recA bacterial DNA recombination protein LAGLIDADG_3 PF14528.6 gi|121638612|ref|YP_978836.1| - 5.5e-17 61.9 0.0 4.8e-13 49.2 0.0 2.6 2 0 0 2 2 2 2 LAGLIDADG-like domain Intein_splicing PF14890.6 gi|121638612|ref|YP_978836.1| - 5e-12 45.9 0.0 8.5e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain Rad51 PF08423.11 gi|121638612|ref|YP_978836.1| - 7e-09 35.3 0.0 1.5e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|121638612|ref|YP_978836.1| - 1.7e-07 30.9 0.7 2e-05 24.0 0.2 3.2 2 1 0 2 2 2 1 KaiC AAA_24 PF13479.6 gi|121638612|ref|YP_978836.1| - 0.0013 18.4 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|121638612|ref|YP_978836.1| - 0.0018 18.2 0.0 0.0038 17.2 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|121638612|ref|YP_978836.1| - 0.0066 16.1 0.7 0.1 12.1 0.0 2.6 1 1 1 2 2 2 1 AAA domain CobU PF02283.16 gi|121638612|ref|YP_978836.1| - 0.014 15.0 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA PF00004.29 gi|121638612|ref|YP_978836.1| - 0.027 14.9 0.0 0.064 13.7 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FhuF_C PF11575.8 gi|121638613|ref|YP_978837.1| - 4.2e-11 42.5 7.2 6e-11 42.0 7.2 1.3 1 0 0 1 1 1 1 FhuF 2Fe-2S C-terminal domain DUF3046 PF11248.8 gi|121638614|ref|YP_978838.1| - 2.4e-28 98.3 0.1 2.6e-28 98.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3046) Glyco_tran_28_C PF04101.16 gi|121638615|ref|YP_978839.1| - 8.3e-08 32.4 0.0 1.3e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 gi|121638615|ref|YP_978839.1| - 1.7e-07 30.4 0.0 3.9e-06 25.9 0.0 2.0 2 0 0 2 2 2 2 UDP-glucoronosyl and UDP-glucosyl transferase Glycos_transf_1 PF00534.20 gi|121638615|ref|YP_978839.1| - 0.2 11.2 0.0 0.39 10.2 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferases group 1 LEH PF07858.12 gi|121638616|ref|YP_978840.1| - 1.6e-52 176.9 0.8 1.9e-52 176.6 0.8 1.0 1 0 0 1 1 1 1 Limonene-1,2-epoxide hydrolase catalytic domain SnoaL_2 PF12680.7 gi|121638616|ref|YP_978840.1| - 3.4e-15 56.5 1.1 4.9e-15 56.0 1.1 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|121638616|ref|YP_978840.1| - 0.00014 21.7 0.5 0.0012 18.6 0.5 1.9 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase WI12 PF07107.11 gi|121638616|ref|YP_978840.1| - 0.14 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Wound-induced protein WI12 PE PF00934.20 gi|121638618|ref|YP_978842.1| - 5.6e-27 93.9 17.0 8.9e-27 93.3 17.0 1.3 1 0 0 1 1 1 1 PE family DUF3046 PF11248.8 gi|121638619|ref|YP_978843.1| - 4.7e-13 49.3 0.2 6.7e-13 48.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3046) Gallidermin PF02052.15 gi|121638619|ref|YP_978843.1| - 0.015 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Gallidermin YycC PF14174.6 gi|121638620|ref|YP_978844.1| - 0.11 12.3 0.2 0.17 11.7 0.2 1.2 1 0 0 1 1 1 0 YycC-like protein Ycf1 PF05758.12 gi|121638620|ref|YP_978844.1| - 0.22 9.3 0.0 0.28 9.0 0.0 1.0 1 0 0 1 1 1 0 Ycf1 PEHE PF15275.6 gi|121638620|ref|YP_978844.1| - 0.81 10.3 8.2 1.7 9.3 7.7 1.7 1 1 1 2 2 2 0 PEHE domain DUF2937 PF11157.8 gi|121638621|ref|YP_978845.1| - 0.16 11.7 0.2 0.16 11.7 0.2 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2937) PspA_IM30 PF04012.12 gi|121638622|ref|YP_978846.1| - 3.3e-63 213.2 32.6 3.9e-63 213.0 32.6 1.0 1 0 0 1 1 1 1 PspA/IM30 family EF-G-binding_N PF07299.11 gi|121638622|ref|YP_978846.1| - 0.93 10.1 6.4 0.26 11.8 2.7 2.0 2 0 0 2 2 2 0 Elongation factor G-binding protein, N-terminal Fib_alpha PF08702.10 gi|121638622|ref|YP_978846.1| - 5.8 7.1 10.9 12 6.0 1.6 2.4 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF948 PF06103.11 gi|121638622|ref|YP_978846.1| - 7.2 6.9 12.1 0.88 9.9 3.4 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TFIIA PF03153.13 gi|121638622|ref|YP_978846.1| - 7.4 6.5 15.6 9.3 6.1 15.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit HTH_31 PF13560.6 gi|121638623|ref|YP_978847.1| - 8.7e-12 45.2 0.6 8.7e-12 45.2 0.6 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|121638623|ref|YP_978847.1| - 5.1e-10 39.2 0.5 7.9e-10 38.7 0.1 1.5 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|121638623|ref|YP_978847.1| - 5.3e-06 26.4 0.0 6.9e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|121638623|ref|YP_978847.1| - 5.6e-06 26.1 0.1 1.1e-05 25.1 0.1 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain CDP-OH_P_transf PF01066.21 gi|121638624|ref|YP_978848.1| - 1.2e-13 51.6 1.8 1.2e-13 51.6 1.8 2.5 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Acetyltransf_1 PF00583.25 gi|121638625|ref|YP_978849.1| - 3.7e-10 40.1 0.0 5.2e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121638625|ref|YP_978849.1| - 1.2e-09 38.5 0.0 2.1e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121638625|ref|YP_978849.1| - 1.8e-05 24.7 0.0 2.5e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|121638625|ref|YP_978849.1| - 0.0079 16.3 0.0 0.014 15.5 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|121638625|ref|YP_978849.1| - 0.011 15.8 0.0 0.053 13.6 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121638625|ref|YP_978849.1| - 0.065 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein FtsK_SpoIIIE PF01580.18 gi|121638626|ref|YP_978850.1| - 4.6e-67 225.9 0.4 4.2e-65 219.5 0.4 2.3 1 1 0 1 1 1 1 FtsK/SpoIIIE family FtsK_alpha PF17854.1 gi|121638626|ref|YP_978850.1| - 1.3e-27 95.9 0.0 2.3e-27 95.1 0.0 1.4 1 0 0 1 1 1 1 FtsK alpha domain FtsK_gamma PF09397.10 gi|121638626|ref|YP_978850.1| - 4.4e-24 84.1 0.1 1.5e-23 82.4 0.1 2.0 1 0 0 1 1 1 1 Ftsk gamma domain FtsK_4TM PF13491.6 gi|121638626|ref|YP_978850.1| - 6.9e-06 25.9 9.7 2.3e-05 24.2 7.5 2.4 2 1 0 2 2 2 1 4TM region of DNA translocase FtsK/SpoIIIE DUF87 PF01935.17 gi|121638626|ref|YP_978850.1| - 2.4e-05 24.6 0.0 4.3e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_10 PF12846.7 gi|121638626|ref|YP_978850.1| - 0.00092 18.2 0.0 0.034 13.1 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain T2SSE PF00437.20 gi|121638626|ref|YP_978850.1| - 0.0032 16.6 0.0 0.0056 15.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein Adeno_IVa2 PF02456.15 gi|121638626|ref|YP_978850.1| - 0.007 15.2 0.0 0.011 14.6 0.0 1.2 1 0 0 1 1 1 1 Adenovirus IVa2 protein AAA_16 PF13191.6 gi|121638626|ref|YP_978850.1| - 0.014 15.8 0.0 0.042 14.2 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 gi|121638626|ref|YP_978850.1| - 0.016 14.1 0.0 0.043 12.7 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 gi|121638626|ref|YP_978850.1| - 0.027 13.6 0.0 0.045 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_29 PF13555.6 gi|121638626|ref|YP_978850.1| - 0.041 13.6 0.1 0.095 12.5 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MaAIMP_sms PF16951.5 gi|121638626|ref|YP_978850.1| - 0.066 13.0 0.2 0.19 11.5 0.2 1.8 1 0 0 1 1 1 0 Putative methionine and alanine importer, small subunit Septin PF00735.18 gi|121638626|ref|YP_978850.1| - 0.15 11.3 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_7 PF12775.7 gi|121638626|ref|YP_978850.1| - 0.19 11.2 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Bax1-I PF01027.20 gi|121638626|ref|YP_978850.1| - 3.3 7.5 5.8 7.5 6.3 5.8 1.6 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 ABM PF03992.16 gi|121638627|ref|YP_978851.1| - 6.1e-16 58.3 0.1 7.4e-16 58.0 0.1 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase TTc_toxin_rep PF18807.1 gi|121638627|ref|YP_978851.1| - 0.28 11.0 0.6 5.8 6.8 0.2 2.5 3 0 0 3 3 3 0 Tripartite Tc toxins repeat adh_short_C2 PF13561.6 gi|121638628|ref|YP_978852.1| - 2.1e-48 164.9 4.6 9.3e-48 162.8 4.6 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121638628|ref|YP_978852.1| - 1.8e-44 151.5 1.7 1.1e-43 149.0 1.7 1.9 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121638628|ref|YP_978852.1| - 3.3e-08 33.6 1.4 5.5e-08 32.9 1.4 1.3 1 0 0 1 1 1 1 KR domain LCM PF04072.14 gi|121638629|ref|YP_978853.1| - 2.1e-41 142.0 0.0 2.7e-41 141.6 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Lactamase_B_2 PF12706.7 gi|121638630|ref|YP_978854.1| - 5.1e-13 49.0 0.1 1.3e-12 47.7 0.1 1.7 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|121638630|ref|YP_978854.1| - 4.6e-11 42.5 0.0 1.5e-09 37.7 0.0 2.5 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|121638630|ref|YP_978854.1| - 1.2e-10 41.8 5.2 4.3e-10 39.9 5.2 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RNase_J_C PF17770.1 gi|121638630|ref|YP_978854.1| - 2.7e-10 41.1 0.0 5.4e-10 40.2 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease J C-terminal domain DHDPS PF00701.22 gi|121638631|ref|YP_978855.1| - 5.1e-77 258.4 0.0 5.8e-77 258.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Peripla_BP_6 PF13458.6 gi|121638631|ref|YP_978855.1| - 0.00088 19.0 0.5 0.38 10.3 0.1 2.4 1 1 1 2 2 2 2 Periplasmic binding protein FMN_dh PF01070.18 gi|121638631|ref|YP_978855.1| - 0.14 11.2 2.5 0.077 12.0 0.3 1.6 2 0 0 2 2 2 0 FMN-dependent dehydrogenase Thy1 PF02511.15 gi|121638632|ref|YP_978856.1| - 2e-56 190.8 0.4 2.5e-56 190.5 0.4 1.0 1 0 0 1 1 1 1 Thymidylate synthase complementing protein CHASE3 PF05227.13 gi|121638632|ref|YP_978856.1| - 0.068 13.1 2.2 0.099 12.6 2.2 1.2 1 0 0 1 1 1 0 CHASE3 domain N6_Mtase PF02384.16 gi|121638634|ref|YP_978858.1| - 2.5e-126 421.2 0.0 3.2e-126 420.8 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|121638634|ref|YP_978858.1| - 5.3e-26 91.9 0.0 9.9e-26 91.0 0.0 1.5 1 0 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|121638634|ref|YP_978858.1| - 0.00026 20.6 0.0 0.00054 19.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain AviRa PF11599.8 gi|121638634|ref|YP_978858.1| - 0.016 14.6 0.0 0.056 12.9 0.0 1.8 2 1 0 2 2 2 0 RRNA methyltransferase AviRa UPF0020 PF01170.18 gi|121638634|ref|YP_978858.1| - 0.12 12.0 1.0 1.5 8.5 1.0 2.1 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Eco57I PF07669.11 gi|121638634|ref|YP_978858.1| - 0.15 12.6 0.0 0.34 11.4 0.0 1.6 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Methyltransf_15 PF09445.10 gi|121638634|ref|YP_978858.1| - 0.2 11.2 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PIN PF01850.21 gi|121638635|ref|YP_978859.1| - 1.3e-12 48.3 0.1 1.4e-12 48.1 0.1 1.0 1 0 0 1 1 1 1 PIN domain VapB_antitoxin PF09957.9 gi|121638636|ref|YP_978860.1| - 2.3e-09 37.0 1.5 2.3e-09 37.0 1.5 1.4 2 0 0 2 2 2 1 Bacterial antitoxin of type II TA system, VapB 3HCDH_N PF02737.18 gi|121638636|ref|YP_978860.1| - 0.08 12.8 0.2 0.086 12.7 0.2 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PIN PF01850.21 gi|121638637|ref|YP_978861.1| - 1.4e-15 57.8 0.0 1.7e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 PIN domain Glutaredoxin PF00462.24 gi|121638637|ref|YP_978861.1| - 0.18 12.1 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin PSK_trans_fac PF07704.11 gi|121638638|ref|YP_978862.1| - 2.6e-20 72.9 8.4 3.3e-20 72.6 8.4 1.1 1 0 0 1 1 1 1 Rv0623-like transcription factor RHH_1 PF01402.21 gi|121638638|ref|YP_978862.1| - 0.0015 18.4 0.1 0.0015 18.4 0.1 2.5 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Orbi_NS3 PF01616.16 gi|121638638|ref|YP_978862.1| - 0.16 11.7 0.8 0.18 11.5 0.8 1.0 1 0 0 1 1 1 0 Orbivirus NS3 FUSC PF04632.12 gi|121638638|ref|YP_978862.1| - 0.7 8.3 6.6 0.74 8.3 6.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Methylase_S PF01420.19 gi|121638639|ref|YP_978863.1| - 1.1e-07 32.2 0.0 1.4e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain DHFR_1 PF00186.19 gi|121638642|ref|YP_978866.1| - 1.2e-44 151.8 0.0 1.3e-44 151.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase Thymidylat_synt PF00303.19 gi|121638643|ref|YP_978867.1| - 1.2e-119 398.4 0.0 1.4e-119 398.2 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase DLH PF01738.18 gi|121638644|ref|YP_978868.1| - 8.2e-65 218.4 0.0 9.2e-65 218.2 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|121638644|ref|YP_978868.1| - 1.7e-06 28.1 0.1 0.00022 21.2 0.0 2.3 1 1 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 gi|121638644|ref|YP_978868.1| - 0.00063 19.5 0.1 0.0014 18.3 0.1 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|121638644|ref|YP_978868.1| - 0.0012 18.4 0.0 0.49 9.8 0.0 2.3 1 1 1 2 2 2 2 Prolyl oligopeptidase family Esterase_phd PF10503.9 gi|121638644|ref|YP_978868.1| - 0.016 14.7 1.4 0.14 11.6 1.1 2.0 1 1 0 1 1 1 0 Esterase PHB depolymerase AXE1 PF05448.12 gi|121638644|ref|YP_978868.1| - 0.036 12.7 0.0 0.053 12.2 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Thioesterase PF00975.20 gi|121638644|ref|YP_978868.1| - 0.042 14.0 0.0 8.1 6.5 0.0 2.2 2 0 0 2 2 2 0 Thioesterase domain adh_short_C2 PF13561.6 gi|121638645|ref|YP_978869.1| - 1.6e-60 204.6 3.5 1.8e-60 204.4 3.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121638645|ref|YP_978869.1| - 4.9e-50 169.7 0.3 5.8e-50 169.5 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121638645|ref|YP_978869.1| - 1.5e-07 31.5 0.9 2.2e-07 31.0 0.9 1.2 1 0 0 1 1 1 1 KR domain ADH_zinc_N PF00107.26 gi|121638645|ref|YP_978869.1| - 0.0013 18.7 0.7 0.0029 17.6 0.7 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 gi|121638645|ref|YP_978869.1| - 0.0054 16.6 1.9 0.0057 16.6 0.8 1.7 2 0 0 2 2 2 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|121638645|ref|YP_978869.1| - 0.016 14.6 0.2 0.036 13.4 0.2 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|121638645|ref|YP_978869.1| - 0.017 15.0 0.3 0.025 14.5 0.3 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|121638645|ref|YP_978869.1| - 0.028 13.8 0.2 0.07 12.4 0.0 1.8 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 gi|121638645|ref|YP_978869.1| - 0.077 12.4 0.4 0.12 11.8 0.1 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family PPE PF00823.19 gi|121638647|ref|YP_978871.1| - 3.4e-59 199.5 32.2 3.4e-59 199.5 32.2 3.2 3 1 1 4 4 4 1 PPE family PE_PPE_C PF12484.8 gi|121638647|ref|YP_978871.1| - 2.9e-19 69.8 17.2 2.9e-19 69.8 17.2 5.8 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal RecC_C PF17946.1 gi|121638647|ref|YP_978871.1| - 0.039 13.7 1.1 0.083 12.7 1.1 1.5 1 0 0 1 1 1 0 RecC C-terminal domain PE PF00934.20 gi|121638648|ref|YP_978872.1| - 4.1e-29 100.7 14.1 4.1e-29 100.7 14.1 2.5 3 1 1 4 4 4 1 PE family PE_PPE_C PF12484.8 gi|121638648|ref|YP_978872.1| - 1.5e-18 67.5 15.7 1.5e-18 67.5 15.7 4.2 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121638649|ref|YP_978873.1| - 3.4e-55 186.5 29.5 3.4e-55 186.5 29.5 2.2 3 1 0 3 3 3 1 PPE family PE_PPE_C PF12484.8 gi|121638649|ref|YP_978873.1| - 1.3e-16 61.3 12.9 1.3e-16 61.3 12.9 5.5 3 1 1 4 4 4 1 Polymorphic PE/PPE proteins C terminal FMN_red PF03358.15 gi|121638650|ref|YP_978874.1| - 2e-05 24.4 0.0 3.2e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase TPR_2 PF07719.17 gi|121638651|ref|YP_978875.1| - 0.00013 21.9 2.0 0.00013 21.9 2.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|121638651|ref|YP_978875.1| - 0.0009 19.3 0.4 0.0025 17.9 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF3611 PF12263.8 gi|121638651|ref|YP_978875.1| - 0.005 16.7 0.8 0.0063 16.4 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3611) TPR_19 PF14559.6 gi|121638651|ref|YP_978875.1| - 0.0078 16.7 2.5 0.0078 16.7 2.5 2.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|121638651|ref|YP_978875.1| - 0.083 13.6 1.9 0.083 13.6 1.9 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|121638651|ref|YP_978875.1| - 0.11 12.3 0.3 0.27 11.1 0.3 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat LMBR1 PF04791.16 gi|121638651|ref|YP_978875.1| - 0.15 10.9 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TPR_7 PF13176.6 gi|121638651|ref|YP_978875.1| - 0.17 12.0 1.5 0.26 11.4 0.4 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF4282 PF14110.6 gi|121638651|ref|YP_978875.1| - 5 7.9 9.5 7.5 7.4 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DapB_C PF05173.14 gi|121638652|ref|YP_978876.1| - 7e-31 106.8 0.0 1e-30 106.2 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|121638652|ref|YP_978876.1| - 6e-24 84.5 1.1 2.1e-22 79.6 1.1 2.2 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|121638652|ref|YP_978876.1| - 0.036 14.5 0.3 0.38 11.2 0.0 2.3 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Acetyltransf_1 PF00583.25 gi|121638654|ref|YP_978878.1| - 1.1e-11 45.0 0.0 1.3e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121638654|ref|YP_978878.1| - 2e-10 40.9 0.0 2.9e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121638654|ref|YP_978878.1| - 8.5e-10 38.7 0.0 1.1e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121638654|ref|YP_978878.1| - 0.00019 21.3 0.0 0.00032 20.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 gi|121638654|ref|YP_978878.1| - 0.07 12.9 0.0 0.091 12.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 gi|121638654|ref|YP_978878.1| - 0.12 12.3 0.0 0.26 11.3 0.0 1.6 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_16 PF05301.11 gi|121638654|ref|YP_978878.1| - 0.16 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Fer2 PF00111.27 gi|121638655|ref|YP_978879.1| - 4e-09 36.3 0.1 7e-09 35.5 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 gi|121638655|ref|YP_978879.1| - 9.8e-06 26.2 0.1 4.5e-05 24.1 0.1 2.0 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|121638655|ref|YP_978879.1| - 3.4e-05 24.1 0.0 5.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|121638655|ref|YP_978879.1| - 0.00022 21.3 0.0 0.35 11.0 0.0 2.2 2 0 0 2 2 2 2 Ferric reductase NAD binding domain Metal_hydrol PF10118.9 gi|121638656|ref|YP_978880.1| - 7.2e-78 261.7 0.0 8.5e-78 261.5 0.0 1.1 1 0 0 1 1 1 1 Predicted metal-dependent hydrolase AurF PF11583.8 gi|121638656|ref|YP_978880.1| - 0.0078 15.5 0.2 0.011 15.0 0.2 1.2 1 0 0 1 1 1 1 P-aminobenzoate N-oxygenase AurF Polyketide_cyc2 PF10604.9 gi|121638657|ref|YP_978881.1| - 2e-19 70.3 3.0 2.4e-19 70.0 3.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport HTH_24 PF13412.6 gi|121638658|ref|YP_978882.1| - 1.3e-15 56.6 0.0 2e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|121638658|ref|YP_978882.1| - 3.8e-15 55.4 0.2 6.2e-15 54.7 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|121638658|ref|YP_978882.1| - 1.5e-14 53.7 0.1 2.7e-14 52.9 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 gi|121638658|ref|YP_978882.1| - 3.1e-05 23.9 0.1 6.3e-05 22.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121638658|ref|YP_978882.1| - 0.00072 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|121638658|ref|YP_978882.1| - 0.002 18.0 0.0 0.0045 16.9 0.0 1.6 1 0 0 1 1 1 1 MarR family AlaDh_PNT_N PF05222.15 gi|121638659|ref|YP_978883.1| - 2.1e-29 102.6 0.0 2.5e-29 102.3 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain DUF3225 PF11533.8 gi|121638659|ref|YP_978883.1| - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3225) AlaDh_PNT_C PF01262.21 gi|121638660|ref|YP_978884.1| - 4.1e-81 271.4 0.3 4.6e-81 271.2 0.3 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|121638660|ref|YP_978884.1| - 1.2e-07 31.3 0.1 1.9e-07 30.6 0.1 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|121638660|ref|YP_978884.1| - 2.1e-06 27.8 0.0 3.4e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|121638660|ref|YP_978884.1| - 9.5e-06 25.9 0.2 1.4e-05 25.3 0.2 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase GIDA PF01134.22 gi|121638660|ref|YP_978884.1| - 2.5e-05 23.5 0.3 3.3e-05 23.1 0.3 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|121638660|ref|YP_978884.1| - 0.00016 22.2 0.1 0.0003 21.3 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|121638660|ref|YP_978884.1| - 0.00022 20.5 0.4 0.00028 20.2 0.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|121638660|ref|YP_978884.1| - 0.00073 19.8 0.3 0.0011 19.2 0.3 1.3 1 0 0 1 1 1 1 TrkA-N domain HI0933_like PF03486.14 gi|121638660|ref|YP_978884.1| - 0.0014 17.4 0.4 0.0019 17.0 0.4 1.1 1 0 0 1 1 1 1 HI0933-like protein 3HCDH_N PF02737.18 gi|121638660|ref|YP_978884.1| - 0.0026 17.7 1.0 0.0074 16.2 1.0 1.8 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121638660|ref|YP_978884.1| - 0.0049 17.3 0.2 0.0073 16.7 0.2 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 gi|121638660|ref|YP_978884.1| - 0.0097 15.2 1.6 0.18 11.1 0.1 2.2 1 1 1 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FAD_binding_2 PF00890.24 gi|121638660|ref|YP_978884.1| - 0.012 14.7 2.5 0.018 14.1 2.5 1.2 1 0 0 1 1 1 0 FAD binding domain IlvN PF07991.12 gi|121638660|ref|YP_978884.1| - 0.014 15.0 0.1 0.024 14.2 0.1 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain FAD_oxidored PF12831.7 gi|121638660|ref|YP_978884.1| - 0.018 14.4 3.6 0.025 13.9 3.6 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|121638660|ref|YP_978884.1| - 0.027 14.0 0.3 0.049 13.2 0.3 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 gi|121638660|ref|YP_978884.1| - 0.072 12.3 0.3 0.11 11.7 0.3 1.2 1 0 0 1 1 1 0 Thi4 family AdoHcyase_NAD PF00670.21 gi|121638660|ref|YP_978884.1| - 0.12 12.4 0.5 0.18 11.8 0.5 1.2 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAS PF03059.16 gi|121638660|ref|YP_978884.1| - 0.15 11.3 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein NMO PF03060.15 gi|121638661|ref|YP_978885.1| - 9e-120 400.0 1.1 1.1e-119 399.7 1.1 1.0 1 0 0 1 1 1 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|121638661|ref|YP_978885.1| - 0.00051 19.4 0.3 0.00069 18.9 0.3 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|121638661|ref|YP_978885.1| - 0.00065 18.8 0.3 0.18 10.7 0.2 2.3 2 1 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 gi|121638661|ref|YP_978885.1| - 0.00081 18.9 0.1 0.0014 18.1 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein Glu_synthase PF01645.17 gi|121638661|ref|YP_978885.1| - 0.0019 17.4 1.1 0.017 14.2 1.6 2.0 2 0 0 2 2 2 1 Conserved region in glutamate synthase ThiG PF05690.14 gi|121638661|ref|YP_978885.1| - 0.013 14.9 0.7 0.025 13.9 0.7 1.6 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|121638661|ref|YP_978885.1| - 0.022 14.1 0.2 0.039 13.3 0.2 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|121638661|ref|YP_978885.1| - 0.057 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 gi|121638661|ref|YP_978885.1| - 0.4 9.7 5.6 0.73 8.8 5.6 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Peptidase_M16_C PF05193.21 gi|121638662|ref|YP_978886.1| - 4.3e-38 131.2 0.0 8.5e-38 130.2 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 gi|121638662|ref|YP_978886.1| - 1.2e-35 122.7 0.0 3.7e-35 121.1 0.0 1.9 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) NUMOD3 PF07460.11 gi|121638662|ref|YP_978886.1| - 0.031 14.5 0.1 0.054 13.7 0.1 1.3 1 0 0 1 1 1 0 NUMOD3 motif (2 copies) RNase_PH PF01138.21 gi|121638663|ref|YP_978887.1| - 2.2e-36 125.3 0.0 8.9e-18 65.1 0.0 2.5 2 0 0 2 2 2 2 3' exoribonuclease family, domain 1 PNPase PF03726.14 gi|121638663|ref|YP_978887.1| - 7.6e-22 77.6 1.1 2.1e-21 76.2 1.1 1.8 1 0 0 1 1 1 1 Polyribonucleotide nucleotidyltransferase, RNA binding domain S1 PF00575.23 gi|121638663|ref|YP_978887.1| - 3.2e-14 53.0 0.7 7.9e-14 51.8 0.7 1.7 1 0 0 1 1 1 1 S1 RNA binding domain KH_1 PF00013.29 gi|121638663|ref|YP_978887.1| - 5.5e-11 42.1 0.9 1.4e-10 40.9 0.9 1.7 1 0 0 1 1 1 1 KH domain RNase_PH_C PF03725.15 gi|121638663|ref|YP_978887.1| - 2.7e-07 30.5 2.5 0.0062 16.5 0.2 3.2 2 1 0 2 2 2 2 3' exoribonuclease family, domain 2 KH_2 PF07650.17 gi|121638663|ref|YP_978887.1| - 0.0053 16.6 0.0 0.016 15.0 0.0 1.8 1 0 0 1 1 1 1 KH domain KH_5 PF13184.6 gi|121638663|ref|YP_978887.1| - 0.082 13.0 0.7 0.36 11.0 0.7 2.1 1 0 0 1 1 1 0 NusA-like KH domain KH_4 PF13083.6 gi|121638663|ref|YP_978887.1| - 0.11 12.4 0.4 0.4 10.6 0.0 2.1 2 0 0 2 2 2 0 KH domain P22_CoatProtein PF11651.8 gi|121638664|ref|YP_978888.1| - 0.012 14.3 0.1 0.016 13.9 0.1 1.1 1 0 0 1 1 1 0 P22 coat protein - gene protein 5 GSK-3_bind PF05350.12 gi|121638664|ref|YP_978888.1| - 0.048 13.0 0.1 0.073 12.4 0.1 1.3 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding PCSK9_C2 PF18464.1 gi|121638664|ref|YP_978888.1| - 0.13 12.4 1.3 17 5.5 0.0 2.7 2 1 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Ribosomal_S15 PF00312.22 gi|121638665|ref|YP_978889.1| - 5.3e-36 122.7 2.5 6e-36 122.5 2.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 FAD_syn PF06574.12 gi|121638666|ref|YP_978890.1| - 3.4e-51 173.3 0.2 5.6e-51 172.6 0.2 1.3 1 0 0 1 1 1 1 FAD synthetase Flavokinase PF01687.17 gi|121638666|ref|YP_978890.1| - 2.3e-34 118.0 0.0 7.8e-34 116.3 0.0 1.8 2 0 0 2 2 2 1 Riboflavin kinase CTP_transf_like PF01467.26 gi|121638666|ref|YP_978890.1| - 0.0027 17.9 0.0 0.0066 16.7 0.0 1.7 1 1 0 1 1 1 1 Cytidylyltransferase-like ATP-sulfurylase PF01747.17 gi|121638666|ref|YP_978890.1| - 0.04 13.4 0.2 8 5.9 0.2 2.2 1 1 0 2 2 2 0 ATP-sulfurylase CbiA PF01656.23 gi|121638667|ref|YP_978891.1| - 8.8e-09 35.5 0.0 1.6e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|121638667|ref|YP_978891.1| - 8.5e-08 32.3 0.1 2e-07 31.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain TPR_19 PF14559.6 gi|121638667|ref|YP_978891.1| - 2e-07 31.4 1.9 0.031 14.8 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat ParA PF10609.9 gi|121638667|ref|YP_978891.1| - 0.00041 19.9 0.5 0.00076 19.0 0.5 1.3 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase TPR_6 PF13174.6 gi|121638667|ref|YP_978891.1| - 0.00072 20.0 0.5 2.4 9.0 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|121638667|ref|YP_978891.1| - 0.0033 18.1 8.4 6.3 7.9 0.0 4.7 3 1 1 4 4 4 2 Tetratricopeptide repeat AAA_25 PF13481.6 gi|121638667|ref|YP_978891.1| - 0.0036 16.9 0.0 0.0073 15.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain TPR_2 PF07719.17 gi|121638667|ref|YP_978891.1| - 0.013 15.5 0.3 13 6.2 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat ArsA_ATPase PF02374.15 gi|121638667|ref|YP_978891.1| - 0.014 14.6 0.1 0.021 14.0 0.1 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|121638667|ref|YP_978891.1| - 0.016 14.7 0.1 0.041 13.4 0.1 1.7 1 1 0 1 1 1 0 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|121638667|ref|YP_978891.1| - 0.023 14.0 0.5 0.039 13.2 0.5 1.4 1 1 0 1 1 1 0 ATPase MipZ TPR_16 PF13432.6 gi|121638667|ref|YP_978891.1| - 0.079 13.6 11.5 0.36 11.5 1.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat Fe_dep_repr_C PF02742.15 gi|121638668|ref|YP_978892.1| - 5.4e-31 106.5 0.0 1.6e-30 105.0 0.0 1.7 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|121638668|ref|YP_978892.1| - 2.2e-23 82.2 0.1 3.5e-23 81.5 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|121638668|ref|YP_978892.1| - 2.4e-21 75.8 0.0 7.3e-21 74.2 0.0 1.8 2 0 0 2 2 2 1 FeoA domain HTH_27 PF13463.6 gi|121638668|ref|YP_978892.1| - 7.5e-07 29.6 0.0 1.5e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|121638668|ref|YP_978892.1| - 2.6e-05 24.1 0.1 8.3e-05 22.5 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|121638668|ref|YP_978892.1| - 5.2e-05 23.0 0.1 0.00011 21.9 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|121638668|ref|YP_978892.1| - 7.6e-05 22.7 0.1 0.00028 20.9 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|121638668|ref|YP_978892.1| - 7.9e-05 22.1 0.0 0.00013 21.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|121638668|ref|YP_978892.1| - 0.00012 22.0 0.0 0.00027 20.8 0.0 1.6 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|121638668|ref|YP_978892.1| - 0.00019 21.0 0.0 0.00042 19.9 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 gi|121638668|ref|YP_978892.1| - 0.00035 20.3 0.0 0.00074 19.2 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|121638668|ref|YP_978892.1| - 0.00048 19.9 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_10 PF04967.12 gi|121638668|ref|YP_978892.1| - 0.0012 18.6 0.1 0.0027 17.5 0.1 1.6 1 0 0 1 1 1 1 HTH DNA binding domain HTH_5 PF01022.20 gi|121638668|ref|YP_978892.1| - 0.0014 18.5 0.1 0.0024 17.7 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HemN_C PF06969.16 gi|121638668|ref|YP_978892.1| - 0.0019 18.3 0.0 0.0034 17.4 0.0 1.4 1 0 0 1 1 1 1 HemN C-terminal domain MerR PF00376.23 gi|121638668|ref|YP_978892.1| - 0.002 17.9 0.4 1.6 8.5 0.0 3.3 3 1 0 3 3 2 1 MerR family regulatory protein HTH_36 PF13730.6 gi|121638668|ref|YP_978892.1| - 0.002 18.0 0.0 0.0044 16.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121638668|ref|YP_978892.1| - 0.002 17.9 0.2 0.013 15.3 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|121638668|ref|YP_978892.1| - 0.0022 18.3 0.0 0.0038 17.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Penicillinase_R PF03965.16 gi|121638668|ref|YP_978892.1| - 0.0046 17.3 0.2 0.0073 16.7 0.2 1.4 1 0 0 1 1 1 1 Penicillinase repressor HTH_11 PF08279.12 gi|121638668|ref|YP_978892.1| - 0.0063 16.4 0.1 0.013 15.5 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_AsnC-type PF13404.6 gi|121638668|ref|YP_978892.1| - 0.014 15.2 0.1 0.035 13.9 0.1 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Ribosomal_S25 PF03297.15 gi|121638668|ref|YP_978892.1| - 0.017 15.3 0.0 0.035 14.3 0.0 1.5 1 0 0 1 1 1 0 S25 ribosomal protein DUF2250 PF10007.9 gi|121638668|ref|YP_978892.1| - 0.023 14.8 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_23 PF13384.6 gi|121638668|ref|YP_978892.1| - 0.066 13.0 0.5 1.1 9.1 0.1 2.4 2 0 0 2 2 2 0 Homeodomain-like domain DUF4423 PF14394.6 gi|121638668|ref|YP_978892.1| - 0.12 12.0 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Acyl-CoA_dh_1 PF00441.24 gi|121638669|ref|YP_978893.1| - 3.8e-43 147.3 4.3 5.8e-43 146.7 4.3 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121638669|ref|YP_978893.1| - 4.6e-22 78.0 0.0 9.2e-22 77.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121638669|ref|YP_978893.1| - 1.3e-14 54.7 0.3 2.4e-14 53.7 0.3 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121638669|ref|YP_978893.1| - 6.7e-10 39.6 0.7 5.1e-09 36.8 0.3 2.5 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Thiolase_N PF00108.23 gi|121638670|ref|YP_978894.1| - 1.6e-22 80.1 0.0 2.5e-21 76.2 0.0 2.5 2 1 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121638670|ref|YP_978894.1| - 3.9e-10 39.5 0.0 1.3e-09 37.8 0.0 1.9 1 1 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121638670|ref|YP_978894.1| - 3.3e-06 26.9 0.9 6.6e-05 22.6 0.9 2.4 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|121638670|ref|YP_978894.1| - 0.002 17.9 0.2 0.21 11.4 0.1 2.6 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SpoVAD PF07451.11 gi|121638670|ref|YP_978894.1| - 0.011 14.4 0.0 0.02 13.6 0.0 1.3 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) DSBA PF01323.20 gi|121638670|ref|YP_978894.1| - 0.06 13.1 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Ketoacyl-synt_C PF02801.22 gi|121638670|ref|YP_978894.1| - 0.11 12.6 0.1 4.3 7.4 0.0 2.8 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain OrfB_IS605 PF01385.19 gi|121638671|ref|YP_978895.1| - 3.5e-29 101.4 0.4 3.5e-29 101.4 0.4 1.7 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|121638671|ref|YP_978895.1| - 7e-15 54.7 0.4 1.5e-14 53.7 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|121638671|ref|YP_978895.1| - 7.7e-11 41.3 0.1 1.7e-10 40.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Resolvase PF00239.21 gi|121638672|ref|YP_978896.1| - 2.8e-17 63.2 3.4 3.5e-17 62.9 3.4 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|121638672|ref|YP_978896.1| - 0.031 14.5 0.0 0.071 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TruB_N PF01509.18 gi|121638673|ref|YP_978897.1| - 5e-52 176.2 0.0 6.6e-52 175.8 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C PF09142.11 gi|121638673|ref|YP_978897.1| - 1.9e-22 78.8 3.3 6.5e-22 77.1 3.3 2.0 1 0 0 1 1 1 1 tRNA Pseudouridine synthase II, C terminal TruB_C_2 PF16198.5 gi|121638673|ref|YP_978897.1| - 7.4e-13 48.4 1.3 1.7e-12 47.3 1.3 1.6 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|121638673|ref|YP_978897.1| - 0.026 14.6 0.2 0.046 13.8 0.2 1.4 1 0 0 1 1 1 0 DKCLD (NUC011) domain Peptidase_A21 PF03566.13 gi|121638673|ref|YP_978897.1| - 0.34 9.1 1.3 0.43 8.8 1.3 1.1 1 0 0 1 1 1 0 Peptidase family A21 4PPT_N PF17837.1 gi|121638674|ref|YP_978898.1| - 3.1e-25 88.1 0.0 7.3e-25 86.9 0.0 1.6 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase N-terminal domain ACPS PF01648.20 gi|121638674|ref|YP_978898.1| - 5.2e-10 39.5 0.0 8.9e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Metallophos PF00149.28 gi|121638675|ref|YP_978899.1| - 1.3e-13 52.0 0.0 2.7e-13 50.9 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|121638675|ref|YP_978899.1| - 0.00018 21.7 0.0 0.027 14.6 0.0 2.2 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain LppA PF16708.5 gi|121638676|ref|YP_978900.1| - 1.2e-55 187.6 0.0 1.5e-55 187.3 0.0 1.1 1 0 0 1 1 1 1 Lipoprotein confined to pathogenic Mycobacterium Abhydrolase_8 PF06259.12 gi|121638677|ref|YP_978901.1| - 2.9e-77 258.3 3.7 2.9e-77 258.3 3.7 2.5 2 1 0 2 2 2 1 Alpha/beta hydrolase Cutinase PF01083.22 gi|121638677|ref|YP_978901.1| - 2e-06 27.9 0.1 0.00085 19.3 0.0 2.4 2 0 0 2 2 2 2 Cutinase Abhydrolase_1 PF00561.20 gi|121638677|ref|YP_978901.1| - 4.8e-05 23.1 0.1 8.5e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121638677|ref|YP_978901.1| - 0.00051 19.4 0.0 0.00095 18.5 0.0 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Nnf1 PF03980.14 gi|121638677|ref|YP_978901.1| - 0.0013 19.1 1.7 0.0013 19.1 1.7 2.1 2 1 0 2 2 2 1 Nnf1 DUF900 PF05990.12 gi|121638677|ref|YP_978901.1| - 0.0055 16.3 0.0 0.01 15.3 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Lipase_3 PF01764.25 gi|121638677|ref|YP_978901.1| - 0.0057 16.5 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) Thioesterase PF00975.20 gi|121638677|ref|YP_978901.1| - 0.0058 16.8 2.0 0.0064 16.6 0.1 1.9 2 0 0 2 2 2 1 Thioesterase domain DUF2974 PF11187.8 gi|121638677|ref|YP_978901.1| - 0.013 15.0 0.1 0.024 14.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) ZapB PF06005.12 gi|121638677|ref|YP_978901.1| - 0.021 15.2 3.7 0.13 12.7 3.0 2.5 2 1 1 3 3 3 0 Cell division protein ZapB Seryl_tRNA_N PF02403.22 gi|121638677|ref|YP_978901.1| - 0.34 11.2 2.2 7.1 6.9 0.1 2.5 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DivIC PF04977.15 gi|121638677|ref|YP_978901.1| - 0.39 10.5 3.7 0.61 9.9 0.2 2.6 3 0 0 3 3 3 0 Septum formation initiator DUF4407 PF14362.6 gi|121638677|ref|YP_978901.1| - 0.43 9.9 10.6 2.5 7.4 10.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2205 PF10224.9 gi|121638677|ref|YP_978901.1| - 2.9 7.9 5.1 7 6.7 1.1 2.5 2 0 0 2 2 2 0 Short coiled-coil protein WXG100 PF06013.12 gi|121638678|ref|YP_978902.1| - 0.0022 18.2 7.9 0.003 17.8 7.9 1.3 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Cas_Csy1 PF09611.10 gi|121638678|ref|YP_978902.1| - 0.098 11.7 0.1 0.13 11.3 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) DUF3558 PF12079.8 gi|121638679|ref|YP_978903.1| - 1.6e-08 34.7 0.1 2.2e-08 34.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3558) Peptidase_S15 PF02129.18 gi|121638680|ref|YP_978904.1| - 5.4e-67 226.2 0.2 7.4e-67 225.8 0.2 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) PepX_C PF08530.10 gi|121638680|ref|YP_978904.1| - 6.2e-27 95.0 0.0 1.3e-26 94.0 0.0 1.5 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Peptidase_S9 PF00326.21 gi|121638680|ref|YP_978904.1| - 0.00059 19.4 0.1 0.38 10.2 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 gi|121638680|ref|YP_978904.1| - 0.078 12.8 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 alpha/beta hydrolase fold PemK_toxin PF02452.17 gi|121638681|ref|YP_978905.1| - 2.8e-28 98.5 0.1 3.2e-28 98.4 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF2293 PF10056.9 gi|121638682|ref|YP_978906.1| - 3.9e-25 87.9 0.4 3.9e-25 87.9 0.4 3.3 4 0 0 4 4 4 1 Uncharacterized conserved protein (DUF2293) DUF1778 PF08681.11 gi|121638683|ref|YP_978907.1| - 9e-25 86.4 3.5 1.5e-24 85.7 3.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) ParD PF09386.10 gi|121638683|ref|YP_978907.1| - 1.6e-05 25.2 0.0 2.5e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Antitoxin ParD HicB PF05534.12 gi|121638683|ref|YP_978907.1| - 0.0028 17.4 0.0 0.0056 16.5 0.0 1.5 1 0 0 1 1 1 1 HicB family rve PF00665.26 gi|121638687|ref|YP_978911.1| - 1.6e-11 44.4 0.0 2.5e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain Mub_B2 PF17966.1 gi|121638687|ref|YP_978911.1| - 0.19 12.5 0.5 2.5 8.9 0.1 2.4 2 0 0 2 2 2 0 Mub B2-like domain Tautomerase PF01361.21 gi|121638688|ref|YP_978912.1| - 0.016 15.1 0.0 0.026 14.4 0.0 1.4 1 0 0 1 1 1 0 Tautomerase enzyme HTH_23 PF13384.6 gi|121638690|ref|YP_978914.1| - 0.044 13.6 0.9 0.091 12.6 0.9 1.6 1 0 0 1 1 1 0 Homeodomain-like domain TF_Zn_Ribbon PF08271.12 gi|121638690|ref|YP_978914.1| - 0.05 13.1 1.7 0.23 11.0 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-HYPF PF07503.12 gi|121638690|ref|YP_978914.1| - 0.072 12.9 0.1 0.76 9.6 0.0 2.5 3 0 0 3 3 3 0 HypF finger DUF2752 PF10825.8 gi|121638690|ref|YP_978914.1| - 0.26 11.4 4.1 8.7 6.5 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) rve PF00665.26 gi|121638691|ref|YP_978915.1| - 3.1e-27 95.1 0.0 5.1e-27 94.4 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain Mu-transpos_C PF09299.11 gi|121638691|ref|YP_978915.1| - 9.9e-11 41.4 0.1 3.3e-10 39.8 0.0 1.9 2 0 0 2 2 2 1 Mu transposase, C-terminal HTH_28 PF13518.6 gi|121638691|ref|YP_978915.1| - 3.2e-10 40.0 0.5 1.6e-09 37.7 0.5 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_32 PF13565.6 gi|121638691|ref|YP_978915.1| - 1.4e-07 32.0 3.0 1.4e-07 32.0 3.0 2.4 2 1 1 3 3 3 1 Homeodomain-like domain rve_3 PF13683.6 gi|121638691|ref|YP_978915.1| - 3.6e-06 26.6 0.0 1.1e-05 25.1 0.0 1.9 2 0 0 2 2 2 1 Integrase core domain HTH_23 PF13384.6 gi|121638691|ref|YP_978915.1| - 3.9e-05 23.3 0.4 3.9e-05 23.3 0.4 2.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|121638691|ref|YP_978915.1| - 4.2e-05 23.5 0.6 0.00014 21.8 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn helix DUF4817 PF16087.5 gi|121638691|ref|YP_978915.1| - 0.1 12.5 0.5 21 5.0 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain (DUF4817) DDE_Tnp_IS240 PF13610.6 gi|121638691|ref|YP_978915.1| - 0.13 12.5 0.0 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 DDE domain HTH_17 PF12728.7 gi|121638691|ref|YP_978915.1| - 0.14 12.4 0.6 0.38 11.0 0.6 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain AAA_22 PF13401.6 gi|121638692|ref|YP_978916.1| - 9.8e-18 64.8 0.0 1.6e-17 64.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|121638692|ref|YP_978916.1| - 8.3e-06 25.6 0.3 1.5e-05 24.8 0.3 1.3 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|121638692|ref|YP_978916.1| - 4.1e-05 23.0 0.0 5.4e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|121638692|ref|YP_978916.1| - 0.00034 21.0 2.3 0.0058 17.0 1.1 2.4 2 1 0 2 2 2 1 AAA ATPase domain ResIII PF04851.15 gi|121638692|ref|YP_978916.1| - 0.02 14.9 0.0 3.3 7.7 0.0 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit T2SSE PF00437.20 gi|121638692|ref|YP_978916.1| - 0.021 13.9 0.0 0.039 13.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TsaE PF02367.17 gi|121638692|ref|YP_978916.1| - 0.037 14.0 0.0 0.064 13.3 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 gi|121638692|ref|YP_978916.1| - 0.16 11.6 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 gi|121638692|ref|YP_978916.1| - 0.17 11.4 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 gi|121638692|ref|YP_978916.1| - 0.27 11.1 0.0 1.3 8.9 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea rve PF00665.26 gi|121638693|ref|YP_978917.1| - 9.8e-28 96.7 0.0 2.3e-27 95.5 0.0 1.6 2 0 0 2 2 2 1 Integrase core domain HTH_21 PF13276.6 gi|121638693|ref|YP_978917.1| - 6.9e-16 58.1 0.2 1.6e-15 56.9 0.2 1.6 1 0 0 1 1 1 1 HTH-like domain rve_3 PF13683.6 gi|121638693|ref|YP_978917.1| - 1.1e-13 50.7 0.0 2.5e-13 49.6 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 gi|121638693|ref|YP_978917.1| - 0.0064 16.6 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_Tnp_1 PF01527.20 gi|121638694|ref|YP_978918.1| - 3.7e-09 36.8 2.3 1.5e-08 34.8 2.3 1.9 1 1 0 1 1 1 1 Transposase HTH_17 PF12728.7 gi|121638694|ref|YP_978918.1| - 0.0049 17.0 0.5 0.014 15.6 0.0 2.0 3 0 0 3 3 3 1 Helix-turn-helix domain DUF1323 PF07037.11 gi|121638694|ref|YP_978918.1| - 0.072 13.5 0.0 0.088 13.2 0.0 1.3 1 0 0 1 1 1 0 Putative transcription regulator (DUF1323) MerR_1 PF13411.6 gi|121638694|ref|YP_978918.1| - 0.094 12.8 0.1 0.22 11.7 0.0 1.8 2 1 0 2 2 2 0 MerR HTH family regulatory protein CRISPR_Cas2 PF09827.9 gi|121638695|ref|YP_978919.1| - 1.7e-17 63.3 0.1 2.3e-17 62.9 0.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas1 PF01867.16 gi|121638696|ref|YP_978920.1| - 2.3e-73 246.8 0.0 2.6e-73 246.6 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Lip_A_acyltrans PF03279.13 gi|121638696|ref|YP_978920.1| - 0.098 11.8 0.0 0.26 10.4 0.0 1.6 2 0 0 2 2 2 0 Bacterial lipid A biosynthesis acyltransferase Cas_Csm6 PF09659.10 gi|121638697|ref|YP_978921.1| - 5.1e-93 311.8 0.0 6e-93 311.6 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csm6) RAMPs PF03787.15 gi|121638698|ref|YP_978922.1| - 3.1e-10 40.4 0.0 6.7e-10 39.4 0.0 1.6 1 1 0 1 1 1 1 RAMP superfamily Csm4_C PF17953.1 gi|121638699|ref|YP_978923.1| - 1.3e-26 92.3 0.0 2.2e-26 91.5 0.0 1.3 1 0 0 1 1 1 1 CRISPR Csm4 C-terminal domain RAMPs PF03787.15 gi|121638699|ref|YP_978923.1| - 0.067 13.2 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 RAMP superfamily RAMPs PF03787.15 gi|121638700|ref|YP_978924.1| - 8.6e-14 52.1 0.1 1.3e-13 51.5 0.1 1.2 1 0 0 1 1 1 1 RAMP superfamily Csm2_III-A PF03750.13 gi|121638701|ref|YP_978925.1| - 5.7e-20 72.3 0.1 6.6e-20 72.1 0.1 1.0 1 0 0 1 1 1 1 Csm2 Type III-A Csm1_B PF18211.1 gi|121638702|ref|YP_978926.1| - 7.4e-36 121.9 0.0 1.1e-34 118.1 0.0 2.6 3 0 0 3 3 3 1 Csm1 subunit domain B HD PF01966.22 gi|121638702|ref|YP_978926.1| - 0.00055 20.1 0.1 0.0015 18.7 0.1 1.7 1 0 0 1 1 1 1 HD domain mCpol PF18182.1 gi|121638702|ref|YP_978926.1| - 0.007 16.7 0.0 0.022 15.1 0.0 1.8 1 0 0 1 1 1 1 minimal CRISPR polymerase domain DUF2616 PF11077.8 gi|121638702|ref|YP_978926.1| - 0.045 13.5 0.2 0.081 12.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) Vps39_1 PF10366.9 gi|121638702|ref|YP_978926.1| - 0.11 12.8 0.1 0.4 11.0 0.0 1.9 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 1 CRISPR_Cas6 PF10040.9 gi|121638703|ref|YP_978927.1| - 2.1e-17 63.5 0.2 3.9e-17 62.7 0.2 1.5 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 MRF_C1 PF13887.6 gi|121638703|ref|YP_978927.1| - 0.31 10.2 0.7 5.9 6.1 0.0 2.8 3 0 0 3 3 3 0 Myelin gene regulatory factor -C-terminal domain 1 DUF1802 PF08819.11 gi|121638704|ref|YP_978928.1| - 1.4e-59 200.9 0.1 1.6e-59 200.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) Cas9_C PF18525.1 gi|121638704|ref|YP_978928.1| - 0.048 13.8 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Cas9 C-terminal domain AbiEii PF08843.11 gi|121638705|ref|YP_978929.1| - 5.8e-24 85.3 0.5 7.6e-24 85.0 0.5 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system AbiEi_1 PF09407.10 gi|121638706|ref|YP_978930.1| - 9.8e-49 165.3 0.1 1.7e-48 164.6 0.1 1.3 1 0 0 1 1 1 1 AbiEi antitoxin C-terminal domain AbiEi_4 PF13338.6 gi|121638706|ref|YP_978930.1| - 7.3e-19 67.6 0.9 1.9e-18 66.3 0.2 2.0 2 0 0 2 2 2 1 Transcriptional regulator, AbiEi antitoxin DUF1802 PF08819.11 gi|121638707|ref|YP_978931.1| - 1.7e-60 203.9 0.1 1.9e-60 203.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) Cas9_C PF18525.1 gi|121638707|ref|YP_978931.1| - 0.073 13.3 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Cas9 C-terminal domain DUF2277 PF10041.9 gi|121638708|ref|YP_978932.1| - 7.2e-34 116.0 1.5 8.2e-34 115.8 1.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2277) PIN PF01850.21 gi|121638709|ref|YP_978933.1| - 2.2e-16 60.5 0.1 2.5e-16 60.3 0.1 1.0 1 0 0 1 1 1 1 PIN domain PIN_10 PF18478.1 gi|121638709|ref|YP_978933.1| - 0.012 15.8 0.0 0.023 14.9 0.0 1.5 1 1 0 1 1 1 0 PIN like domain Mut7-C PF01927.16 gi|121638709|ref|YP_978933.1| - 0.041 14.0 0.0 0.06 13.4 0.0 1.2 1 0 0 1 1 1 0 Mut7-C RNAse domain PhdYeFM_antitox PF02604.19 gi|121638710|ref|YP_978934.1| - 1.8e-09 37.3 0.0 2.1e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system ECH_1 PF00378.20 gi|121638711|ref|YP_978935.1| - 2.6e-51 174.4 0.0 4.3e-51 173.6 0.0 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121638711|ref|YP_978935.1| - 1.9e-28 99.9 0.3 3e-27 96.0 0.3 2.0 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase AMMECR1 PF01871.17 gi|121638711|ref|YP_978935.1| - 0.12 12.0 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 AMMECR1 ABC_tran PF00005.27 gi|121638712|ref|YP_978936.1| - 1.4e-29 103.3 0.0 2.2e-29 102.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter CysA_C_terminal PF17850.1 gi|121638712|ref|YP_978936.1| - 1.1e-07 32.3 1.7 1.3e-05 25.7 0.7 2.7 2 0 0 2 2 2 1 CysA C-terminal regulatory domain OB_MalK PF17912.1 gi|121638712|ref|YP_978936.1| - 7e-07 30.0 0.1 2.6e-06 28.2 0.1 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 gi|121638712|ref|YP_978936.1| - 6.7e-05 22.8 0.0 0.012 15.4 0.0 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|121638712|ref|YP_978936.1| - 0.00017 21.6 0.0 0.00026 21.0 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|121638712|ref|YP_978936.1| - 0.001 19.0 0.0 0.0019 18.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|121638712|ref|YP_978936.1| - 0.0017 18.6 0.0 0.003 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121638712|ref|YP_978936.1| - 0.011 16.1 0.0 0.023 15.1 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 gi|121638712|ref|YP_978936.1| - 0.024 14.2 0.2 0.12 11.9 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|121638712|ref|YP_978936.1| - 0.028 14.1 0.0 0.062 13.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|121638712|ref|YP_978936.1| - 0.045 14.2 0.0 0.082 13.3 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|121638712|ref|YP_978936.1| - 0.047 13.1 0.0 9.2 5.6 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|121638712|ref|YP_978936.1| - 0.062 13.0 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|121638712|ref|YP_978936.1| - 0.087 13.0 0.8 0.3 11.2 0.5 2.1 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|121638712|ref|YP_978936.1| - 0.092 12.7 0.2 0.28 11.2 0.1 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) TOBE_2 PF08402.10 gi|121638712|ref|YP_978936.1| - 0.12 12.5 1.1 0.75 10.0 0.3 2.6 2 1 0 2 2 2 0 TOBE domain TcpA PF05946.12 gi|121638712|ref|YP_978936.1| - 0.16 12.0 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA SBP_bac_1 PF01547.25 gi|121638713|ref|YP_978937.1| - 2.5e-19 70.4 0.4 3.2e-19 70.0 0.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|121638713|ref|YP_978937.1| - 1.2e-17 64.6 0.1 1.7e-17 64.2 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 gi|121638713|ref|YP_978937.1| - 7.1e-05 22.5 5.0 0.00014 21.6 5.0 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence SBP_bac_6 PF13343.6 gi|121638713|ref|YP_978937.1| - 0.0021 17.5 0.1 0.0026 17.2 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein UCR_Fe-S_N PF10399.9 gi|121638713|ref|YP_978937.1| - 0.017 14.5 0.9 0.038 13.4 0.9 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CytB6-F_Fe-S PF08802.10 gi|121638713|ref|YP_978937.1| - 0.14 12.2 0.3 0.3 11.1 0.3 1.6 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit BPD_transp_1 PF00528.22 gi|121638714|ref|YP_978938.1| - 1.5e-14 54.2 16.2 1.5e-14 54.2 16.2 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121638715|ref|YP_978939.1| - 8.9e-22 77.7 10.0 1.4e-21 77.1 10.0 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Phage_holin_3_5 PF16085.5 gi|121638715|ref|YP_978939.1| - 0.017 15.3 1.5 0.029 14.5 0.1 2.0 2 1 0 2 2 2 0 Bacteriophage holin Hol, superfamily III MatE PF01554.18 gi|121638716|ref|YP_978940.1| - 3.5e-43 147.0 32.9 6.5e-27 94.2 8.3 2.2 2 0 0 2 2 2 2 MatE DHHA1 PF02272.19 gi|121638717|ref|YP_978941.1| - 4.3e-14 53.1 0.1 7.1e-14 52.4 0.1 1.4 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|121638717|ref|YP_978941.1| - 4.7e-14 52.4 0.0 1.1e-13 51.3 0.0 1.6 1 0 0 1 1 1 1 DHH family RBFA PF02033.18 gi|121638718|ref|YP_978942.1| - 8.8e-22 77.6 0.0 1.1e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A GTP_EFTU PF00009.27 gi|121638719|ref|YP_978943.1| - 2.2e-33 115.5 5.0 4e-32 111.3 2.4 3.0 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|121638719|ref|YP_978943.1| - 7.4e-33 112.8 0.9 2e-32 111.4 0.9 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 IF2_N PF04760.15 gi|121638719|ref|YP_978943.1| - 1.5e-23 82.3 0.0 1.3e-14 53.7 0.0 2.4 2 0 0 2 2 2 2 Translation initiation factor IF-2, N-terminal region MMR_HSR1 PF01926.23 gi|121638719|ref|YP_978943.1| - 4e-08 33.3 0.1 1e-07 32.0 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|121638719|ref|YP_978943.1| - 3.3e-07 30.6 4.3 0.0026 18.1 0.1 3.2 3 0 0 3 3 3 2 Elongation factor Tu domain 2 Ras PF00071.22 gi|121638719|ref|YP_978943.1| - 4e-07 29.8 0.0 7.4e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Ras family Roc PF08477.13 gi|121638719|ref|YP_978943.1| - 0.0005 20.3 0.0 0.00081 19.6 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 gi|121638719|ref|YP_978943.1| - 0.003 17.0 0.0 0.01 15.2 0.0 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit DUF448 PF04296.13 gi|121638720|ref|YP_978944.1| - 3.2e-20 71.7 0.1 3.7e-20 71.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF448) KH_5 PF13184.6 gi|121638721|ref|YP_978945.1| - 6.4e-26 90.2 0.2 1.9e-25 88.7 0.1 1.9 2 0 0 2 2 2 1 NusA-like KH domain NusA_N PF08529.11 gi|121638721|ref|YP_978945.1| - 3.3e-17 62.9 0.1 2e-08 34.6 0.0 2.4 1 1 1 2 2 2 2 NusA N-terminal domain KH_2 PF07650.17 gi|121638721|ref|YP_978945.1| - 0.0001 22.1 1.1 0.02 14.7 0.0 3.3 3 0 0 3 3 3 1 KH domain KH_1 PF00013.29 gi|121638721|ref|YP_978945.1| - 0.00015 21.6 0.1 0.15 11.9 0.0 2.7 2 1 1 3 3 3 2 KH domain DUF5334 PF17268.2 gi|121638721|ref|YP_978945.1| - 0.084 13.2 0.0 1.4 9.3 0.0 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5334) DUF150 PF02576.17 gi|121638722|ref|YP_978946.1| - 2.9e-12 46.8 0.0 7.2e-12 45.5 0.0 1.6 2 0 0 2 2 2 1 RimP N-terminal domain DUF150_C PF17384.2 gi|121638722|ref|YP_978946.1| - 2.1e-10 40.6 0.2 3.2e-10 40.0 0.2 1.3 1 0 0 1 1 1 1 RimP C-terminal SH3 domain ISP3_C PF18045.1 gi|121638722|ref|YP_978946.1| - 0.25 11.2 0.0 0.37 10.7 0.0 1.2 1 0 0 1 1 1 0 ISP3 C-terminal TAT_signal PF10518.9 gi|121638723|ref|YP_978947.1| - 0.0001 22.0 2.0 0.0001 22.0 2.0 3.9 4 0 0 4 4 4 1 TAT (twin-arginine translocation) pathway signal sequence SfLAP PF11139.8 gi|121638723|ref|YP_978947.1| - 0.012 15.0 5.3 0.021 14.3 5.3 1.4 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein SseC PF04888.12 gi|121638723|ref|YP_978947.1| - 0.28 10.7 5.4 0.45 10.1 5.4 1.2 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family DUF4439 PF14530.6 gi|121638724|ref|YP_978948.1| - 1.2e-44 152.2 5.6 1.4e-44 152.0 5.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4439) NSP2_assoc PF14758.6 gi|121638724|ref|YP_978948.1| - 0.07 13.5 0.1 0.077 13.3 0.1 1.1 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein tRNA-synt_2b PF00587.25 gi|121638725|ref|YP_978949.1| - 1.8e-38 132.3 0.0 2.4e-38 131.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 gi|121638725|ref|YP_978949.1| - 7.1e-21 74.6 0.0 1.4e-20 73.6 0.0 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain HGTP_anticodon PF03129.20 gi|121638725|ref|YP_978949.1| - 7.3e-13 48.5 0.0 1.9e-12 47.1 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain DUF1198 PF06711.11 gi|121638725|ref|YP_978949.1| - 0.054 13.6 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1198) MFS_1 PF07690.16 gi|121638726|ref|YP_978950.1| - 2.8e-43 148.2 47.6 2.8e-43 148.2 47.6 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily Iron_permease PF04120.12 gi|121638726|ref|YP_978950.1| - 0.043 13.6 1.0 0.071 12.9 0.2 1.9 2 0 0 2 2 2 0 Low affinity iron permease TP_methylase PF00590.20 gi|121638727|ref|YP_978951.1| - 6.2e-46 157.0 5.9 1.2e-45 156.1 5.9 1.5 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NAD_binding_7 PF13241.6 gi|121638727|ref|YP_978951.1| - 3.4e-22 78.8 0.4 1.4e-21 76.9 0.4 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|121638727|ref|YP_978951.1| - 0.035 13.5 0.0 0.23 10.8 0.0 2.2 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GATase_3 PF07685.14 gi|121638728|ref|YP_978952.1| - 1e-24 87.3 0.0 1.5e-24 86.7 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|121638728|ref|YP_978952.1| - 1.3e-19 70.5 0.0 2.1e-19 69.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|121638728|ref|YP_978952.1| - 2.1e-13 50.5 0.6 5.7e-09 36.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain DJ-1_PfpI PF01965.24 gi|121638728|ref|YP_978952.1| - 0.0018 18.1 0.0 0.0037 17.1 0.0 1.6 1 0 0 1 1 1 1 DJ-1/PfpI family SNO PF01174.19 gi|121638728|ref|YP_978952.1| - 0.0089 15.9 0.0 0.021 14.6 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family MobB PF03205.14 gi|121638728|ref|YP_978952.1| - 0.016 15.1 0.0 0.037 13.9 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CobA_CobO_BtuR PF02572.15 gi|121638729|ref|YP_978953.1| - 2.9e-56 190.4 0.0 3.3e-56 190.2 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP MtrH PF02007.18 gi|121638729|ref|YP_978953.1| - 0.17 10.9 0.2 0.23 10.5 0.2 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit AAA_lid_2 PF17863.1 gi|121638730|ref|YP_978954.1| - 4.4e-17 61.7 8.2 4.4e-17 61.7 8.2 2.5 2 0 0 2 2 2 1 AAA lid domain AAA_5 PF07728.14 gi|121638730|ref|YP_978954.1| - 2.9e-13 50.0 0.0 4.9e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) VWA_2 PF13519.6 gi|121638730|ref|YP_978954.1| - 5.3e-13 49.5 0.1 1e-12 48.6 0.1 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|121638730|ref|YP_978954.1| - 6.9e-09 36.2 0.0 1.1e-08 35.5 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.21 gi|121638730|ref|YP_978954.1| - 7.5e-09 35.3 0.6 5.3e-08 32.5 0.0 2.3 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|121638730|ref|YP_978954.1| - 4.7e-07 29.1 0.0 1.1e-06 27.9 0.0 1.6 1 1 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|121638730|ref|YP_978954.1| - 0.0019 17.9 0.1 0.0043 16.8 0.1 1.5 1 1 0 1 1 1 1 Sigma-54 interaction domain VWA_3 PF13768.6 gi|121638730|ref|YP_978954.1| - 0.016 15.2 0.0 0.038 13.9 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain AAA_3 PF07726.11 gi|121638730|ref|YP_978954.1| - 0.033 14.0 0.0 0.096 12.6 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|121638730|ref|YP_978954.1| - 0.033 14.6 0.0 0.19 12.1 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Acetyltransf_10 PF13673.7 gi|121638731|ref|YP_978955.1| - 6.6e-13 48.7 0.0 7.6e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121638731|ref|YP_978955.1| - 7.8e-06 26.2 0.0 1.2e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PH_17 PF18012.1 gi|121638731|ref|YP_978955.1| - 0.093 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 PH domain Mqo PF06039.15 gi|121638732|ref|YP_978956.1| - 1.2e-208 693.6 0.0 1.3e-208 693.4 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) DAO PF01266.24 gi|121638732|ref|YP_978956.1| - 8.5e-12 45.3 0.0 1.3e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121638732|ref|YP_978956.1| - 0.008 15.5 0.0 0.1 11.8 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain PE PF00934.20 gi|121638733|ref|YP_978957.1| - 1.6e-32 111.7 19.5 2.6e-32 111.0 19.5 1.4 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121638733|ref|YP_978957.1| - 0.4 11.2 10.6 0.72 10.4 10.6 1.4 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Hydrolase_4 PF12146.8 gi|121638734|ref|YP_978958.1| - 2.1e-17 63.2 0.1 2.6e-17 62.9 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121638734|ref|YP_978958.1| - 6.3e-12 46.6 6.5 8.6e-12 46.1 6.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121638734|ref|YP_978958.1| - 3.8e-09 36.6 0.1 9.4e-09 35.3 0.1 1.6 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 gi|121638734|ref|YP_978958.1| - 0.00073 19.5 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF900 PF05990.12 gi|121638734|ref|YP_978958.1| - 0.0029 17.2 0.1 0.01 15.4 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) Lipase_3 PF01764.25 gi|121638734|ref|YP_978958.1| - 0.0048 16.8 0.0 0.0072 16.2 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PAE PF03283.13 gi|121638734|ref|YP_978958.1| - 0.052 12.7 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 Pectinacetylesterase PGAP1 PF07819.13 gi|121638734|ref|YP_978958.1| - 0.22 11.2 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein DUF676 PF05057.14 gi|121638734|ref|YP_978958.1| - 0.23 10.9 0.0 0.35 10.3 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Pyr_redox_2 PF07992.14 gi|121638735|ref|YP_978959.1| - 9.2e-45 153.1 0.4 1.3e-44 152.6 0.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|121638735|ref|YP_978959.1| - 1.6e-28 99.1 0.2 4.1e-28 97.8 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|121638735|ref|YP_978959.1| - 2.7e-14 53.5 0.0 5.9e-14 52.4 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121638735|ref|YP_978959.1| - 6.9e-09 35.4 0.0 9.9e-09 34.9 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|121638735|ref|YP_978959.1| - 9.7e-07 28.2 0.4 3e-06 26.6 0.0 1.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|121638735|ref|YP_978959.1| - 0.00028 20.9 0.5 0.29 11.1 0.1 2.9 3 0 0 3 3 3 2 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|121638735|ref|YP_978959.1| - 0.032 12.9 0.0 5.6 5.5 0.0 2.2 1 1 0 2 2 2 0 HI0933-like protein 3HCDH_N PF02737.18 gi|121638735|ref|YP_978959.1| - 0.049 13.5 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP_kinase_C PF13090.6 gi|121638735|ref|YP_978959.1| - 0.097 12.1 0.1 1.4 8.3 0.0 2.5 3 0 0 3 3 3 0 Polyphosphate kinase C-terminal domain 2 NicO PF03824.16 gi|121638736|ref|YP_978960.1| - 8.2e-99 330.5 12.4 8.2e-99 330.5 12.4 1.6 2 0 0 2 2 2 1 High-affinity nickel-transport protein MHYT PF03707.16 gi|121638736|ref|YP_978960.1| - 0.086 13.0 0.1 0.086 13.0 0.1 5.4 6 1 1 7 7 7 0 Bacterial signalling protein N terminal repeat cobW PF02492.19 gi|121638737|ref|YP_978961.1| - 6.1e-07 29.2 0.0 7.4e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.12 gi|121638737|ref|YP_978961.1| - 0.19 11.0 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin cobW PF02492.19 gi|121638738|ref|YP_978962.1| - 0.00011 21.9 0.0 0.00011 21.8 0.0 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain adh_short_C2 PF13561.6 gi|121638739|ref|YP_978963.1| - 1.6e-65 220.9 0.6 2e-65 220.7 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121638739|ref|YP_978963.1| - 6.8e-47 159.5 0.1 8.2e-47 159.2 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121638739|ref|YP_978963.1| - 0.0013 18.7 3.2 0.0074 16.2 3.2 2.0 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121638739|ref|YP_978963.1| - 0.081 12.4 0.6 0.11 12.0 0.1 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Aldedh PF00171.22 gi|121638740|ref|YP_978964.1| - 5.1e-155 516.5 0.1 5.8e-155 516.3 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Peptidase_C26 PF07722.13 gi|121638741|ref|YP_978965.1| - 9.7e-70 234.7 0.0 1.1e-69 234.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 gi|121638741|ref|YP_978965.1| - 6.9e-13 48.8 0.0 1.1e-12 48.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Gln-synt_C PF00120.24 gi|121638742|ref|YP_978966.1| - 6.2e-101 337.8 0.0 7.9e-101 337.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|121638742|ref|YP_978966.1| - 0.0015 18.3 0.2 0.016 14.9 0.2 2.3 1 1 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Peptidase_M24 PF00557.24 gi|121638743|ref|YP_978967.1| - 1.4e-50 171.9 0.3 1.6e-50 171.7 0.3 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF1707 PF08044.11 gi|121638744|ref|YP_978968.1| - 3e-15 56.0 0.1 6e-15 55.1 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) DUF2154 PF09922.9 gi|121638744|ref|YP_978968.1| - 0.0019 18.1 0.0 0.0035 17.2 0.0 1.7 1 0 0 1 1 1 1 Cell wall-active antibiotics response 4TMS YvqF PIN PF01850.21 gi|121638745|ref|YP_978969.1| - 9.1e-19 68.2 0.0 1.1e-18 67.9 0.0 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|121638745|ref|YP_978969.1| - 0.0042 17.8 0.0 0.0046 17.7 0.0 1.2 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|121638745|ref|YP_978969.1| - 0.031 14.8 0.0 0.037 14.5 0.0 1.1 1 0 0 1 1 1 0 PIN domain Transpeptidase PF00905.22 gi|121638746|ref|YP_978970.1| - 1.1e-35 123.3 0.0 1.9e-35 122.6 0.0 1.3 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain MecA_N PF05223.11 gi|121638746|ref|YP_978970.1| - 5.2e-25 88.0 0.0 7.4e-25 87.5 0.0 1.2 1 0 0 1 1 1 1 NTF2-like N-terminal transpeptidase domain PhdYeFM_antitox PF02604.19 gi|121638747|ref|YP_978971.1| - 6e-21 74.0 0.0 7.2e-21 73.8 0.0 1.1 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system T7SS_ESX1_EccB PF05108.13 gi|121638747|ref|YP_978971.1| - 0.09 11.4 0.0 0.09 11.4 0.0 1.0 1 0 0 1 1 1 0 Type VII secretion system ESX-1, transport TM domain B ParE_toxin PF05016.15 gi|121638748|ref|YP_978972.1| - 2.9e-13 50.3 0.7 3.4e-13 50.0 0.7 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE YoeB_toxin PF06769.14 gi|121638748|ref|YP_978972.1| - 0.00094 19.2 0.0 0.0012 18.8 0.0 1.2 1 0 0 1 1 1 1 YoeB-like toxin of bacterial type II toxin-antitoxin system ParE-like_toxin PF15781.5 gi|121638748|ref|YP_978972.1| - 0.005 16.8 0.0 0.007 16.3 0.0 1.2 1 1 0 1 1 1 1 ParE-like toxin of type II bacterial toxin-antitoxin system Toxin_YhaV PF11663.8 gi|121638748|ref|YP_978972.1| - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Toxin with endonuclease activity, of toxin-antitoxin system DUF4081 PF13312.6 gi|121638749|ref|YP_978973.1| - 1e-39 135.0 0.1 2.1e-39 133.9 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4081) FR47 PF08445.10 gi|121638749|ref|YP_978973.1| - 6.2e-09 35.7 0.3 1.7e-08 34.3 0.0 1.8 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_1 PF00583.25 gi|121638749|ref|YP_978973.1| - 3.3e-06 27.3 0.2 5e-06 26.7 0.2 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|121638749|ref|YP_978973.1| - 0.00013 22.3 0.1 0.00028 21.2 0.1 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121638749|ref|YP_978973.1| - 0.00019 21.4 0.0 0.00032 20.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GcpE PF04551.14 gi|121638750|ref|YP_978974.1| - 1e-131 439.2 0.1 1.1e-131 439.1 0.1 1.0 1 0 0 1 1 1 1 GcpE protein MR_MLE_C PF13378.6 gi|121638750|ref|YP_978974.1| - 0.068 12.7 0.4 0.47 10.0 0.3 2.0 1 1 0 2 2 2 0 Enolase C-terminal domain-like Peptidase_M50 PF02163.22 gi|121638751|ref|YP_978975.1| - 3.5e-52 177.2 0.0 4.7e-52 176.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 gi|121638751|ref|YP_978975.1| - 7.9e-10 38.4 0.1 1.6e-09 37.5 0.1 1.5 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 gi|121638751|ref|YP_978975.1| - 6.9e-05 23.1 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|121638751|ref|YP_978975.1| - 0.00015 22.1 0.0 0.00027 21.2 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Dehydratase_MU PF02288.15 gi|121638751|ref|YP_978975.1| - 0.041 13.8 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 Dehydratase medium subunit Acyl_transf_1 PF00698.21 gi|121638751|ref|YP_978975.1| - 0.063 12.8 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Acyl transferase domain DXP_reductoisom PF02670.16 gi|121638752|ref|YP_978976.1| - 1.3e-37 129.4 1.6 2.8e-37 128.3 1.6 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXP_redisom_C PF08436.12 gi|121638752|ref|YP_978976.1| - 5.8e-35 119.3 0.0 1.4e-34 118.1 0.0 1.7 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DXPR_C PF13288.6 gi|121638752|ref|YP_978976.1| - 6.3e-35 119.9 0.0 1.2e-34 119.0 0.0 1.5 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|121638752|ref|YP_978976.1| - 0.013 15.8 0.4 0.048 13.9 0.4 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 gi|121638752|ref|YP_978976.1| - 0.032 14.7 0.2 0.15 12.5 0.2 2.1 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain CoA_binding_3 PF13727.6 gi|121638752|ref|YP_978976.1| - 0.072 13.1 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 CoA-binding domain RHH_1 PF01402.21 gi|121638753|ref|YP_978977.1| - 1.4e-07 31.2 1.2 2.1e-07 30.6 0.7 1.5 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family ParD_like PF11903.8 gi|121638753|ref|YP_978977.1| - 0.0011 19.1 0.1 0.0016 18.5 0.1 1.3 1 0 0 1 1 1 1 ParD-like antitoxin of type II bacterial toxin-antitoxin system VapB_antitoxin PF09957.9 gi|121638753|ref|YP_978977.1| - 0.0078 16.1 0.4 0.0078 16.1 0.4 1.8 2 1 0 2 2 2 1 Bacterial antitoxin of type II TA system, VapB TetR_C_6 PF13977.6 gi|121638753|ref|YP_978977.1| - 0.023 14.9 1.1 1.6 9.0 1.1 2.0 1 1 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal ParD PF09386.10 gi|121638753|ref|YP_978977.1| - 0.025 15.0 0.0 0.036 14.4 0.0 1.3 1 0 0 1 1 1 0 Antitoxin ParD RHH_4 PF13467.6 gi|121638753|ref|YP_978977.1| - 0.039 13.8 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain SeqA_N PF17206.3 gi|121638753|ref|YP_978977.1| - 0.11 11.8 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 SeqA protein N-terminal domain PIN PF01850.21 gi|121638754|ref|YP_978978.1| - 6.9e-13 49.2 0.0 7.9e-13 49.0 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|121638754|ref|YP_978978.1| - 0.0077 16.0 0.1 0.016 15.0 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) Fasciclin PF02469.22 gi|121638755|ref|YP_978979.1| - 1.8e-26 92.8 0.0 2.3e-26 92.5 0.0 1.1 1 0 0 1 1 1 1 Fasciclin domain Thioredoxin_10 PF17991.1 gi|121638756|ref|YP_978980.1| - 1.7e-33 116.2 0.0 2.9e-33 115.4 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin like C-terminal domain DsbD PF02683.15 gi|121638756|ref|YP_978980.1| - 6.6e-21 75.2 10.4 9.1e-21 74.7 10.4 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region AhpC-TSA PF00578.21 gi|121638756|ref|YP_978980.1| - 1.7e-12 47.4 0.0 3.8e-12 46.2 0.0 1.5 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 gi|121638756|ref|YP_978980.1| - 1.1e-08 34.9 0.0 2.1e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|121638756|ref|YP_978980.1| - 2.1e-05 24.7 0.0 5.2e-05 23.5 0.0 1.6 2 0 0 2 2 2 1 Thioredoxin-like MerE PF05052.12 gi|121638756|ref|YP_978980.1| - 0.0015 18.5 3.6 0.017 15.0 1.5 2.6 2 0 0 2 2 2 1 MerE protein GSHPx PF00255.19 gi|121638756|ref|YP_978980.1| - 0.022 14.4 0.0 0.046 13.3 0.0 1.5 1 0 0 1 1 1 0 Glutathione peroxidase Thioredoxin PF00085.20 gi|121638756|ref|YP_978980.1| - 0.055 13.5 0.0 0.055 13.5 0.0 2.1 3 0 0 3 3 3 0 Thioredoxin Bax1-I PF01027.20 gi|121638756|ref|YP_978980.1| - 0.97 9.2 10.2 0.088 12.6 5.7 1.5 2 0 0 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 Fasciclin PF02469.22 gi|121638757|ref|YP_978981.1| - 5.7e-27 94.5 0.3 7.1e-27 94.2 0.3 1.1 1 0 0 1 1 1 1 Fasciclin domain DUF2631 PF10939.8 gi|121638758|ref|YP_978982.1| - 3.2e-27 94.1 0.7 4.2e-27 93.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2631) DsbD PF02683.15 gi|121638759|ref|YP_978983.1| - 3.9e-11 43.3 15.2 5.7e-11 42.7 15.2 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF3098 PF11297.8 gi|121638759|ref|YP_978983.1| - 0.62 9.7 0.1 0.62 9.7 0.1 2.9 5 0 0 5 5 5 0 Protein of unknown function (DUF3098) PorA PF11271.8 gi|121638759|ref|YP_978983.1| - 5.5 6.2 8.2 3.9 6.7 0.4 2.6 2 1 0 2 2 2 0 Porin PorA AhpC-TSA PF00578.21 gi|121638760|ref|YP_978984.1| - 3.3e-15 56.1 0.0 4.5e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|121638760|ref|YP_978984.1| - 9.7e-11 41.6 0.0 1.3e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 gi|121638760|ref|YP_978984.1| - 5.3e-06 26.8 0.0 3.9e-05 24.1 0.0 2.2 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|121638760|ref|YP_978984.1| - 9.5e-06 25.5 0.0 0.00018 21.4 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|121638760|ref|YP_978984.1| - 0.0003 21.1 0.0 0.00047 20.4 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|121638760|ref|YP_978984.1| - 0.019 14.8 0.0 0.074 12.8 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin Pentapeptide PF00805.22 gi|121638760|ref|YP_978984.1| - 0.12 12.0 0.8 3.2 7.5 0.0 2.5 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) PetL PF05115.14 gi|121638760|ref|YP_978984.1| - 0.13 12.2 0.6 0.28 11.2 0.6 1.5 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) DUF929 PF06053.11 gi|121638760|ref|YP_978984.1| - 0.16 11.2 0.1 0.68 9.2 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF929) Radical_SAM PF04055.21 gi|121638761|ref|YP_978985.1| - 1.4e-21 77.6 0.0 2.2e-21 77.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|121638761|ref|YP_978985.1| - 0.0042 17.2 0.0 0.0083 16.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|121638761|ref|YP_978985.1| - 0.094 13.0 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain CTP_transf_1 PF01148.20 gi|121638762|ref|YP_978986.1| - 2.1e-60 204.8 17.9 2.4e-60 204.6 17.9 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family RRF PF01765.19 gi|121638763|ref|YP_978987.1| - 9.8e-59 197.9 0.7 1.2e-58 197.6 0.7 1.1 1 0 0 1 1 1 1 Ribosome recycling factor DUF883 PF05957.13 gi|121638763|ref|YP_978987.1| - 0.0021 18.6 3.5 0.0021 18.6 3.5 2.0 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF883) Phage_TAC_4 PF08748.11 gi|121638763|ref|YP_978987.1| - 0.12 12.7 2.1 0.21 11.9 2.1 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone AA_kinase PF00696.28 gi|121638764|ref|YP_978988.1| - 1.4e-28 100.1 0.2 1.7e-28 99.9 0.2 1.1 1 0 0 1 1 1 1 Amino acid kinase family Trans_reg_C PF00486.28 gi|121638765|ref|YP_978989.1| - 1.5e-24 85.8 0.1 3.2e-24 84.8 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal GerE PF00196.19 gi|121638765|ref|YP_978989.1| - 0.16 11.6 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family OrfB_IS605 PF01385.19 gi|121638766|ref|YP_978990.1| - 2.5e-27 95.5 0.9 5.4e-27 94.4 0.9 1.6 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|121638766|ref|YP_978990.1| - 6.5e-14 51.6 0.1 1.7e-13 50.3 0.1 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|121638766|ref|YP_978990.1| - 1.4e-08 34.1 1.6 2e-08 33.6 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain ChW PF07538.11 gi|121638766|ref|YP_978990.1| - 0.26 11.2 2.3 0.27 11.2 0.6 2.0 2 0 0 2 2 2 0 Clostridial hydrophobic W Resolvase PF00239.21 gi|121638767|ref|YP_978991.1| - 2e-13 50.7 0.2 2.8e-13 50.2 0.2 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain MarR PF01047.22 gi|121638768|ref|YP_978992.1| - 1.9e-14 53.3 0.0 3.5e-14 52.5 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|121638768|ref|YP_978992.1| - 5.6e-09 35.8 1.1 9.1e-09 35.1 0.1 1.8 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|121638768|ref|YP_978992.1| - 1.6e-05 24.4 0.0 3.3e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|121638768|ref|YP_978992.1| - 1.6e-05 24.8 2.1 2.6e-05 24.2 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|121638768|ref|YP_978992.1| - 0.00048 20.1 0.1 0.0011 18.8 0.0 1.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|121638768|ref|YP_978992.1| - 0.0018 18.1 0.0 0.0035 17.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|121638768|ref|YP_978992.1| - 0.01 16.1 0.0 0.021 15.1 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_11 PF08279.12 gi|121638768|ref|YP_978992.1| - 0.012 15.6 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_5 PF01022.20 gi|121638768|ref|YP_978992.1| - 0.022 14.6 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|121638768|ref|YP_978992.1| - 0.036 14.3 0.0 0.097 12.9 0.0 1.7 1 1 0 1 1 1 0 Winged helix DNA-binding domain SelB-wing_2 PF09106.11 gi|121638768|ref|YP_978992.1| - 0.064 13.5 0.3 0.17 12.1 0.0 1.8 2 0 0 2 2 2 0 Elongation factor SelB, winged helix HxlR PF01638.17 gi|121638768|ref|YP_978992.1| - 0.084 12.7 0.0 0.14 12.0 0.0 1.4 1 1 0 1 1 1 0 HxlR-like helix-turn-helix OxoDH_E1alpha_N PF12573.8 gi|121638768|ref|YP_978992.1| - 0.09 12.5 0.0 10 6.0 0.1 2.4 2 0 0 2 2 2 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal A_thal_3526 PF09713.10 gi|121638768|ref|YP_978992.1| - 0.21 11.9 0.0 0.38 11.0 0.0 1.3 1 0 0 1 1 1 0 Plant protein 1589 of unknown function (A_thal_3526) Amidase PF01425.21 gi|121638769|ref|YP_978993.1| - 8.2e-112 374.4 0.0 9.3e-112 374.2 0.0 1.0 1 0 0 1 1 1 1 Amidase EF_TS PF00889.19 gi|121638770|ref|YP_978994.1| - 6.6e-63 212.1 0.2 8.4e-63 211.7 0.2 1.1 1 0 0 1 1 1 1 Elongation factor TS Glyco_hydro_71 PF03659.14 gi|121638770|ref|YP_978994.1| - 0.23 10.2 0.0 0.32 9.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 Ribosomal_S2 PF00318.20 gi|121638771|ref|YP_978995.1| - 1e-96 322.3 0.0 1.2e-96 322.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S2 PucR PF07905.11 gi|121638771|ref|YP_978995.1| - 0.025 14.9 0.0 0.87 9.9 0.0 2.4 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family Peptidase_M23 PF01551.22 gi|121638772|ref|YP_978996.1| - 6.5e-12 45.5 0.0 1.1e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M23 PPE PF00823.19 gi|121638773|ref|YP_978997.1| - 1.3e-63 213.8 28.7 1.3e-63 213.8 28.7 2.0 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121638773|ref|YP_978997.1| - 2.5e-17 63.6 7.4 2.5e-17 63.6 7.4 5.6 5 2 0 5 5 5 1 Polymorphic PE/PPE proteins C terminal Bac_luciferase PF00296.20 gi|121638774|ref|YP_978998.1| - 1.4e-37 129.9 18.9 6.8e-37 127.6 14.6 2.8 1 1 1 2 2 2 2 Luciferase-like monooxygenase Phage_integrase PF00589.22 gi|121638775|ref|YP_978999.1| - 6.6e-49 166.0 0.0 9.2e-49 165.5 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|121638775|ref|YP_978999.1| - 1e-21 77.0 2.7 1.7e-21 76.3 1.0 2.2 3 0 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|121638775|ref|YP_978999.1| - 0.09 13.3 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|121638775|ref|YP_978999.1| - 0.22 11.9 0.0 3.4 8.0 0.0 2.0 1 1 0 1 1 1 0 Phage integrase SAM-like domain SIP PF04954.13 gi|121638776|ref|YP_979000.1| - 2.2e-35 121.8 0.5 3.3e-35 121.2 0.5 1.3 1 0 0 1 1 1 1 Siderophore-interacting protein FAD_binding_9 PF08021.11 gi|121638776|ref|YP_979000.1| - 3.3e-35 120.9 1.1 1.4e-34 118.9 0.0 2.3 3 0 0 3 3 3 1 Siderophore-interacting FAD-binding domain DNA_processg_A PF02481.15 gi|121638777|ref|YP_979001.1| - 3.3e-70 235.6 0.5 4.9e-70 235.0 0.5 1.3 1 0 0 1 1 1 1 DNA recombination-mediator protein A DprA_WH PF17782.1 gi|121638777|ref|YP_979001.1| - 1.4e-06 28.4 2.7 5.8e-06 26.3 2.7 2.1 1 0 0 1 1 1 1 DprA winged helix domain LDcluster4 PF18306.1 gi|121638777|ref|YP_979001.1| - 0.0033 17.0 6.3 0.034 13.7 6.3 2.3 1 1 0 1 1 1 1 SLOG cluster4 family TrmB PF01978.19 gi|121638777|ref|YP_979001.1| - 0.0047 16.8 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB cpYpsA PF12694.7 gi|121638777|ref|YP_979001.1| - 0.093 12.5 0.0 0.22 11.3 0.0 1.6 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family DUF1979 PF09322.10 gi|121638777|ref|YP_979001.1| - 0.23 11.4 1.0 0.38 10.7 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1979) YAcAr PF10686.9 gi|121638777|ref|YP_979001.1| - 2.8 8.0 11.1 1.6 8.7 2.4 3.5 3 0 0 3 3 3 0 YspA, cpYpsA-related SLOG family Mg_chelatase PF01078.21 gi|121638778|ref|YP_979002.1| - 2.1e-84 282.1 0.0 2.8e-84 281.6 0.0 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ChlI PF13541.6 gi|121638778|ref|YP_979002.1| - 1.7e-38 131.1 0.0 2.8e-38 130.5 0.0 1.3 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Mg_chelatase_C PF13335.6 gi|121638778|ref|YP_979002.1| - 2.8e-23 82.4 0.2 5.8e-23 81.3 0.2 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI C-terminal Lon_C PF05362.13 gi|121638778|ref|YP_979002.1| - 4e-10 39.6 0.0 6.7e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_5 PF07728.14 gi|121638778|ref|YP_979002.1| - 4.5e-09 36.4 0.0 0.00089 19.3 0.1 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|121638778|ref|YP_979002.1| - 1.2e-07 31.6 0.0 0.0011 18.7 0.0 2.6 3 0 0 3 3 3 2 Sigma-54 interaction domain MCM PF00493.23 gi|121638778|ref|YP_979002.1| - 1.1e-05 24.7 0.0 0.0011 18.1 0.0 2.2 2 0 0 2 2 2 1 MCM P-loop domain RuvB_N PF05496.12 gi|121638778|ref|YP_979002.1| - 1.2e-05 25.2 0.0 0.0084 15.9 0.0 2.9 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|121638778|ref|YP_979002.1| - 2.6e-05 24.5 0.0 0.0011 19.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|121638778|ref|YP_979002.1| - 4.3e-05 24.0 0.0 0.00023 21.6 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|121638778|ref|YP_979002.1| - 0.0006 19.6 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121638778|ref|YP_979002.1| - 0.0011 19.4 0.2 0.0039 17.6 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|121638778|ref|YP_979002.1| - 0.0082 16.7 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121638778|ref|YP_979002.1| - 0.022 14.7 0.0 0.059 13.3 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 gi|121638778|ref|YP_979002.1| - 0.026 14.1 0.0 0.041 13.4 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region NTPase_1 PF03266.15 gi|121638778|ref|YP_979002.1| - 0.049 13.5 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_24 PF13479.6 gi|121638778|ref|YP_979002.1| - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|121638778|ref|YP_979002.1| - 0.11 12.7 0.0 0.36 11.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 gi|121638778|ref|YP_979002.1| - 0.21 11.7 0.0 2.4 8.3 0.0 2.1 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) UPF0102 PF02021.17 gi|121638779|ref|YP_979003.1| - 2e-28 98.5 0.2 2.3e-28 98.2 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 SfsA PF03749.13 gi|121638779|ref|YP_979003.1| - 0.0056 16.6 0.0 0.0068 16.3 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain DUF234 PF03008.14 gi|121638779|ref|YP_979003.1| - 0.022 15.2 0.0 0.033 14.6 0.0 1.4 1 1 0 1 1 1 0 Archaea bacterial proteins of unknown function Mrr_cat PF04471.12 gi|121638779|ref|YP_979003.1| - 0.13 12.3 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease NucS PF01939.16 gi|121638779|ref|YP_979003.1| - 0.15 11.4 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Endonuclease NucS FdhD-NarQ PF02634.15 gi|121638780|ref|YP_979004.1| - 2e-81 273.2 0.1 2.3e-81 273.0 0.1 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Molybdopterin PF00384.22 gi|121638781|ref|YP_979005.1| - 1.6e-26 93.2 0.0 2.2e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|121638781|ref|YP_979005.1| - 1.5e-08 34.6 0.3 6e-08 32.7 0.0 2.2 3 0 0 3 3 3 1 Molydopterin dinucleotide binding domain DUF2469 PF10611.9 gi|121638782|ref|YP_979006.1| - 4.5e-52 174.8 4.2 5e-52 174.6 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2469) RNase_HII PF01351.18 gi|121638783|ref|YP_979007.1| - 1e-47 162.5 0.0 1.2e-47 162.3 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease HII Peptidase_S24 PF00717.23 gi|121638784|ref|YP_979008.1| - 3.5e-13 49.3 0.0 3.9e-08 33.1 0.0 2.5 2 0 0 2 2 2 2 Peptidase S24-like Peptidase_S26 PF10502.9 gi|121638784|ref|YP_979008.1| - 7.9e-06 25.7 0.0 2.2e-05 24.3 0.0 1.9 1 1 0 1 1 1 1 Signal peptidase, peptidase S26 Ribosomal_L19 PF01245.20 gi|121638785|ref|YP_979009.1| - 2.5e-50 169.1 1.1 2.7e-50 169.0 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 tRNA_m1G_MT PF01746.21 gi|121638787|ref|YP_979011.1| - 5.3e-70 235.1 0.0 6e-70 234.9 0.0 1.0 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase Rrp40_N PF18311.1 gi|121638787|ref|YP_979011.1| - 0.012 15.5 0.0 0.029 14.3 0.0 1.6 1 0 0 1 1 1 0 Exosome complex exonuclease Rrp40 N-terminal domain RimM PF01782.18 gi|121638788|ref|YP_979012.1| - 1e-20 73.7 0.3 1.6e-20 73.1 0.3 1.3 1 0 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 gi|121638788|ref|YP_979012.1| - 5e-12 45.7 0.1 6.8e-11 42.1 0.2 2.2 2 0 0 2 2 2 1 PRC-barrel domain Ribosomal_L35Ae PF01247.18 gi|121638788|ref|YP_979012.1| - 0.0088 16.2 0.0 3.4 7.9 0.0 2.3 2 0 0 2 2 2 2 Ribosomal protein L35Ae FLgD_tudor PF13861.6 gi|121638788|ref|YP_979012.1| - 1 9.7 5.2 31 4.9 3.6 3.0 2 1 0 2 2 2 0 FlgD Tudor-like domain KH_4 PF13083.6 gi|121638789|ref|YP_979013.1| - 4.2e-20 71.4 0.2 4.8e-20 71.2 0.2 1.1 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|121638789|ref|YP_979013.1| - 0.012 15.4 0.0 0.022 14.6 0.0 1.5 1 0 0 1 1 1 0 KH domain KH_2 PF07650.17 gi|121638789|ref|YP_979013.1| - 0.11 12.4 0.3 0.15 11.9 0.3 1.5 1 1 0 1 1 1 0 KH domain Ribosomal_S16 PF00886.19 gi|121638790|ref|YP_979014.1| - 4.2e-22 78.0 0.2 6.5e-22 77.4 0.2 1.3 1 0 0 1 1 1 1 Ribosomal protein S16 DUF5476 PF17570.2 gi|121638790|ref|YP_979014.1| - 1.9 9.0 7.4 2.6 8.5 5.4 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5476) SnoaL_4 PF13577.6 gi|121638791|ref|YP_979015.1| - 3.8e-30 104.6 0.0 4.3e-30 104.4 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 gi|121638791|ref|YP_979015.1| - 0.007 17.0 0.0 0.0088 16.7 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain Scytalone_dh PF02982.14 gi|121638791|ref|YP_979015.1| - 0.0075 16.1 0.1 0.0094 15.8 0.1 1.2 1 0 0 1 1 1 1 Scytalone dehydratase Peptidase_S11 PF00768.20 gi|121638792|ref|YP_979016.1| - 5.7e-35 120.9 0.0 8.3e-35 120.4 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 gi|121638792|ref|YP_979016.1| - 7.3e-12 45.3 0.2 1e-11 44.9 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 gi|121638792|ref|YP_979016.1| - 0.00016 20.5 0.1 0.00016 20.5 0.1 2.0 2 1 1 3 3 3 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family Transpeptidase PF00905.22 gi|121638792|ref|YP_979016.1| - 0.014 14.6 0.0 0.86 8.7 0.0 2.2 2 0 0 2 2 2 0 Penicillin binding protein transpeptidase domain TetR_N PF00440.23 gi|121638793|ref|YP_979017.1| - 5e-09 35.8 0.5 1.2e-08 34.6 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 gi|121638793|ref|YP_979017.1| - 0.011 15.9 0.9 0.011 15.9 0.9 2.6 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 gi|121638793|ref|YP_979017.1| - 0.016 15.4 4.3 0.036 14.3 0.1 2.4 1 1 2 3 3 3 0 BetI-type transcriptional repressor, C-terminal Amidohydro_3 PF07969.11 gi|121638794|ref|YP_979018.1| - 4.3e-18 66.0 1.7 1.2e-12 48.1 0.3 2.2 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|121638794|ref|YP_979018.1| - 1.6e-07 31.0 0.0 0.0028 17.0 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family RHINO PF15319.6 gi|121638794|ref|YP_979018.1| - 0.27 11.3 0.2 0.46 10.5 0.2 1.3 1 0 0 1 1 1 0 RAD9, RAD1, HUS1-interacting nuclear orphan protein Pkinase PF00069.25 gi|121638795|ref|YP_979019.1| - 4.3e-21 75.5 0.0 3.1e-20 72.6 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121638795|ref|YP_979019.1| - 5.2e-12 45.6 0.0 7.1e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 gi|121638795|ref|YP_979019.1| - 0.0018 17.1 0.0 0.0027 16.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 gi|121638795|ref|YP_979019.1| - 0.0041 17.1 11.8 0.12 12.3 0.1 3.6 1 1 3 4 4 4 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|121638795|ref|YP_979019.1| - 0.0041 16.5 0.0 0.008 15.5 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Acyl-CoA_dh_C PF12806.7 gi|121638795|ref|YP_979019.1| - 0.13 12.5 0.0 0.36 11.0 0.0 1.7 1 0 0 1 1 1 0 Acetyl-CoA dehydrogenase C-terminal like CD24 PF14984.6 gi|121638795|ref|YP_979019.1| - 0.19 12.0 0.2 0.19 12.0 0.2 3.1 3 0 0 3 3 3 0 CD24 protein LPAM_1 PF08139.12 gi|121638795|ref|YP_979019.1| - 0.21 12.1 1.3 0.84 10.3 1.3 2.1 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Amidohydro_1 PF01979.20 gi|121638796|ref|YP_979020.1| - 8.5e-14 51.6 0.0 1.3e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|121638796|ref|YP_979020.1| - 7.8e-05 22.3 7.7 0.0007 19.2 1.5 2.2 1 1 1 2 2 2 2 Amidohydrolase family SRP54 PF00448.22 gi|121638797|ref|YP_979021.1| - 1e-68 230.9 0.0 1.5e-68 230.3 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|121638797|ref|YP_979021.1| - 3.8e-30 104.4 0.9 7.5e-30 103.5 0.3 1.9 2 0 0 2 2 1 1 Signal peptide binding domain SRP54_N PF02881.19 gi|121638797|ref|YP_979021.1| - 4.9e-21 74.7 0.2 1.2e-20 73.5 0.2 1.7 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|121638797|ref|YP_979021.1| - 4.2e-05 23.6 0.0 0.00014 22.0 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.19 gi|121638797|ref|YP_979021.1| - 0.00018 21.2 0.1 0.00044 19.9 0.1 1.6 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|121638797|ref|YP_979021.1| - 0.00091 19.6 1.6 0.0023 18.3 0.2 2.4 2 1 1 3 3 3 1 AAA ATPase domain AAA_33 PF13671.6 gi|121638797|ref|YP_979021.1| - 0.00098 19.3 0.0 0.0021 18.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|121638797|ref|YP_979021.1| - 0.0015 17.8 0.1 0.0028 17.0 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 gi|121638797|ref|YP_979021.1| - 0.0027 17.3 6.7 0.074 12.6 2.7 3.2 2 1 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|121638797|ref|YP_979021.1| - 0.0029 17.5 0.0 0.0067 16.3 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase MeaB PF03308.16 gi|121638797|ref|YP_979021.1| - 0.0031 16.5 0.3 0.0031 16.5 0.3 2.1 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|121638797|ref|YP_979021.1| - 0.0039 17.7 0.0 0.0093 16.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|121638797|ref|YP_979021.1| - 0.0068 16.2 0.0 0.025 14.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_31 PF13614.6 gi|121638797|ref|YP_979021.1| - 0.007 16.3 0.0 0.074 13.0 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|121638797|ref|YP_979021.1| - 0.01 15.6 0.2 0.031 14.0 0.2 1.8 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|121638797|ref|YP_979021.1| - 0.012 15.1 0.1 1.7 8.0 0.0 2.3 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit NTPase_1 PF03266.15 gi|121638797|ref|YP_979021.1| - 0.021 14.7 0.6 0.32 10.9 0.1 2.4 2 0 0 2 2 2 0 NTPase ArsA_ATPase PF02374.15 gi|121638797|ref|YP_979021.1| - 0.024 13.8 0.9 0.52 9.4 0.0 2.7 4 0 0 4 4 4 0 Anion-transporting ATPase MMR_HSR1 PF01926.23 gi|121638797|ref|YP_979021.1| - 0.033 14.3 0.5 0.32 11.1 0.2 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|121638797|ref|YP_979021.1| - 0.037 14.3 0.0 0.092 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|121638797|ref|YP_979021.1| - 0.044 13.8 0.1 0.089 12.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|121638797|ref|YP_979021.1| - 0.059 13.3 1.6 0.087 12.7 0.5 1.8 2 0 0 2 2 2 0 NACHT domain Thymidylate_kin PF02223.17 gi|121638797|ref|YP_979021.1| - 0.076 12.7 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 Thymidylate kinase ResIII PF04851.15 gi|121638797|ref|YP_979021.1| - 0.084 12.9 0.0 1.7 8.7 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit MobB PF03205.14 gi|121638797|ref|YP_979021.1| - 0.11 12.4 0.1 0.21 11.5 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CLP1_P PF16575.5 gi|121638797|ref|YP_979021.1| - 0.14 11.9 0.0 0.96 9.2 0.0 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Collagen PF01391.18 gi|121638797|ref|YP_979021.1| - 4.3 7.2 13.9 13 5.7 13.9 1.8 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) ResIII PF04851.15 gi|121638798|ref|YP_979022.1| - 3.9e-13 49.8 0.0 7.4e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|121638798|ref|YP_979022.1| - 1.1e-08 35.0 0.0 2.1e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 SWI2/SNF2 ATPase DEAD PF00270.29 gi|121638798|ref|YP_979022.1| - 8.3e-05 22.4 0.0 0.00025 20.9 0.0 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121638798|ref|YP_979022.1| - 0.00035 20.9 0.0 0.00078 19.8 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_30 PF13604.6 gi|121638798|ref|YP_979022.1| - 0.0031 17.3 0.1 0.0089 15.8 0.1 1.8 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|121638798|ref|YP_979022.1| - 0.016 15.5 0.1 0.029 14.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain SNF2_N PF00176.23 gi|121638798|ref|YP_979022.1| - 0.043 12.5 0.0 0.069 11.9 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain DnaB_C PF03796.15 gi|121638798|ref|YP_979022.1| - 0.062 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA PF00004.29 gi|121638798|ref|YP_979022.1| - 0.12 12.8 0.0 0.37 11.2 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 gi|121638798|ref|YP_979022.1| - 0.2 11.1 0.0 0.34 10.3 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 gi|121638798|ref|YP_979022.1| - 0.32 10.5 5.2 0.4 10.2 0.1 3.0 3 1 0 3 3 3 0 AAA domain HD PF01966.22 gi|121638799|ref|YP_979023.1| - 9e-13 48.5 0.2 3.2e-12 46.7 0.2 2.0 1 0 0 1 1 1 1 HD domain GlnD_UR_UTase PF08335.11 gi|121638799|ref|YP_979023.1| - 1.7e-10 41.2 0.1 1.1e-08 35.3 0.1 2.4 1 1 0 1 1 1 1 GlnD PII-uridylyltransferase ACT PF01842.25 gi|121638799|ref|YP_979023.1| - 0.00022 20.9 0.6 0.51 10.1 0.1 3.1 2 0 0 2 2 2 2 ACT domain GlnE PF03710.15 gi|121638799|ref|YP_979023.1| - 0.0057 16.1 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 Glutamate-ammonia ligase adenylyltransferase ACT_6 PF13740.6 gi|121638799|ref|YP_979023.1| - 0.048 13.7 2.4 0.096 12.7 0.2 2.6 3 0 0 3 3 3 0 ACT domain ACT_4 PF13291.6 gi|121638799|ref|YP_979023.1| - 0.12 13.0 0.2 38 5.0 0.0 3.0 3 0 0 3 3 3 0 ACT domain HDOD PF08668.12 gi|121638799|ref|YP_979023.1| - 0.13 11.7 0.0 0.31 10.5 0.0 1.6 1 0 0 1 1 1 0 HDOD domain P-II PF00543.22 gi|121638800|ref|YP_979024.1| - 3.1e-41 140.1 2.6 3.5e-41 139.9 2.6 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.21 gi|121638801|ref|YP_979025.1| - 3e-138 460.9 37.8 3.4e-138 460.7 37.8 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family SRP54 PF00448.22 gi|121638802|ref|YP_979026.1| - 6.2e-73 244.6 0.7 8e-73 244.3 0.7 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|121638802|ref|YP_979026.1| - 6.1e-07 29.4 2.5 1.1e-06 28.5 2.5 1.3 1 0 0 1 1 1 1 AAA domain SRP54_N PF02881.19 gi|121638802|ref|YP_979026.1| - 1.6e-06 28.3 0.0 3.5e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_16 PF13191.6 gi|121638802|ref|YP_979026.1| - 2.1e-06 28.2 1.9 2.6e-06 27.9 0.7 1.8 1 1 1 2 2 2 1 AAA ATPase domain CbiA PF01656.23 gi|121638802|ref|YP_979026.1| - 5.4e-05 23.3 0.0 0.00017 21.7 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|121638802|ref|YP_979026.1| - 0.00088 18.3 5.6 0.012 14.6 5.6 2.3 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|121638802|ref|YP_979026.1| - 0.0025 18.2 0.3 0.0043 17.4 0.3 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121638802|ref|YP_979026.1| - 0.0034 17.7 0.0 0.0075 16.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|121638802|ref|YP_979026.1| - 0.0035 17.1 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain MobB PF03205.14 gi|121638802|ref|YP_979026.1| - 0.0038 17.1 1.2 0.063 13.2 0.1 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.12 gi|121638802|ref|YP_979026.1| - 0.0052 16.1 0.1 0.0086 15.4 0.1 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|121638802|ref|YP_979026.1| - 0.011 15.9 0.1 0.025 14.7 0.1 1.8 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|121638802|ref|YP_979026.1| - 0.014 15.5 1.0 0.039 14.0 0.5 2.0 2 1 0 2 2 1 0 50S ribosome-binding GTPase AAA PF00004.29 gi|121638802|ref|YP_979026.1| - 0.027 14.9 0.2 0.083 13.3 0.2 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|121638802|ref|YP_979026.1| - 0.028 14.4 0.2 0.081 12.9 0.2 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 gi|121638802|ref|YP_979026.1| - 0.052 13.8 0.0 0.092 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121638802|ref|YP_979026.1| - 0.058 13.1 1.7 4.4 7.0 0.2 2.2 1 1 1 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|121638802|ref|YP_979026.1| - 0.063 13.2 1.3 0.95 9.4 0.7 2.2 1 1 0 2 2 2 0 NTPase Rad17 PF03215.15 gi|121638802|ref|YP_979026.1| - 0.091 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|121638802|ref|YP_979026.1| - 0.11 12.2 0.1 0.25 11.1 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain APS_kinase PF01583.20 gi|121638802|ref|YP_979026.1| - 0.14 12.1 0.1 0.24 11.3 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase VirC1 PF07015.11 gi|121638802|ref|YP_979026.1| - 0.14 11.4 0.1 0.24 10.7 0.1 1.3 1 0 0 1 1 1 0 VirC1 protein Thymidylate_kin PF02223.17 gi|121638802|ref|YP_979026.1| - 0.15 11.7 0.1 0.26 10.9 0.1 1.3 1 0 0 1 1 1 0 Thymidylate kinase AAA_17 PF13207.6 gi|121638802|ref|YP_979026.1| - 0.16 12.4 0.1 0.37 11.2 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_2 PF07724.14 gi|121638802|ref|YP_979026.1| - 0.16 12.1 0.0 0.5 10.5 0.0 1.8 2 0 0 2 2 1 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|121638802|ref|YP_979026.1| - 0.26 10.8 0.0 1.8 8.1 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region cobW PF02492.19 gi|121638802|ref|YP_979026.1| - 0.83 9.2 4.8 8 6.0 4.8 2.1 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SKG6 PF08693.10 gi|121638802|ref|YP_979026.1| - 1.1 8.8 6.1 2.4 7.6 2.6 2.6 2 0 0 2 2 2 0 Transmembrane alpha-helix domain SMC_N PF02463.19 gi|121638803|ref|YP_979027.1| - 4.1e-74 248.7 0.0 4.9e-74 248.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|121638803|ref|YP_979027.1| - 3.9e-21 75.5 0.0 1.4e-20 73.8 0.0 2.0 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 gi|121638803|ref|YP_979027.1| - 3.2e-18 66.6 0.1 4.6e-09 36.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|121638803|ref|YP_979027.1| - 3.5e-16 60.3 0.0 3.5e-16 60.3 0.0 3.1 3 1 0 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|121638803|ref|YP_979027.1| - 1.2e-11 45.0 0.0 1.2e-08 35.1 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|121638803|ref|YP_979027.1| - 5.8e-06 26.0 0.0 1.1e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|121638803|ref|YP_979027.1| - 0.00046 20.7 0.1 0.066 13.7 0.0 3.6 3 0 0 3 3 3 1 ABC transporter FlaC_arch PF05377.11 gi|121638803|ref|YP_979027.1| - 0.0087 16.4 2.3 5.4 7.5 0.0 5.5 6 0 0 6 6 6 1 Flagella accessory protein C (FlaC) AAA_22 PF13401.6 gi|121638803|ref|YP_979027.1| - 0.22 11.8 5.9 4 7.7 0.0 3.9 4 0 0 4 4 4 0 AAA domain XhlA PF10779.9 gi|121638803|ref|YP_979027.1| - 0.25 11.6 6.4 1.1 9.5 0.0 4.7 4 0 0 4 4 4 0 Haemolysin XhlA Acylphosphatase PF00708.18 gi|121638804|ref|YP_979028.1| - 1e-23 83.5 0.0 1.1e-23 83.4 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase OsmC PF02566.19 gi|121638805|ref|YP_979029.1| - 2.6e-09 37.4 0.0 3.4e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein Fapy_DNA_glyco PF01149.24 gi|121638806|ref|YP_979030.1| - 6.7e-35 120.2 0.3 1.5e-34 119.1 0.1 1.7 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain H2TH PF06831.14 gi|121638806|ref|YP_979030.1| - 7.1e-29 99.7 0.0 1.2e-28 98.9 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 gi|121638806|ref|YP_979030.1| - 3.6e-10 39.5 6.4 3.6e-10 39.5 6.4 2.3 3 0 0 3 3 3 1 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 gi|121638806|ref|YP_979030.1| - 0.022 14.9 1.3 0.048 13.8 1.3 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) FbpA PF05833.11 gi|121638806|ref|YP_979030.1| - 0.03 13.1 0.0 0.043 12.6 0.0 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) TackOD1 PF18551.1 gi|121638806|ref|YP_979030.1| - 0.043 13.5 0.2 0.059 13.0 0.2 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 OrfB_Zn_ribbon PF07282.11 gi|121638806|ref|YP_979030.1| - 0.29 11.1 3.0 0.8 9.7 1.5 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Ribonucleas_3_3 PF14622.6 gi|121638807|ref|YP_979031.1| - 6.7e-36 123.3 0.0 9.9e-36 122.7 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 gi|121638807|ref|YP_979031.1| - 1.9e-20 73.4 0.0 6.4e-20 71.7 0.0 1.9 2 0 0 2 2 2 1 Ribonuclease III domain dsrm PF00035.26 gi|121638807|ref|YP_979031.1| - 9.1e-16 58.3 0.0 1.4e-15 57.7 0.0 1.3 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 gi|121638807|ref|YP_979031.1| - 0.0024 18.1 0.0 0.0072 16.6 0.0 1.8 1 1 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 YceD PF02620.17 gi|121638808|ref|YP_979032.1| - 3.3e-28 98.2 0.2 4.2e-28 97.9 0.2 1.1 1 0 0 1 1 1 1 Large ribosomal RNA subunit accumulation protein YceD V-ATPase_G_2 PF16999.5 gi|121638809|ref|YP_979033.1| - 4.7e-07 30.2 24.4 0.00041 20.7 12.0 3.8 1 1 2 3 3 3 3 Vacuolar (H+)-ATPase G subunit DivIVA PF05103.13 gi|121638809|ref|YP_979033.1| - 3e-06 27.3 20.2 0.00021 21.4 3.9 3.8 1 1 3 4 4 4 4 DivIVA protein ATP-synt_B PF00430.18 gi|121638809|ref|YP_979033.1| - 0.00051 20.1 26.4 0.0042 17.2 5.9 3.7 1 1 2 3 3 3 1 ATP synthase B/B' CF(0) HrpE PF06188.12 gi|121638809|ref|YP_979033.1| - 0.00076 19.4 13.4 0.079 12.8 4.8 3.0 1 1 1 3 3 3 3 HrpE/YscL/FliH and V-type ATPase subunit E V-ATPase_G PF03179.15 gi|121638809|ref|YP_979033.1| - 0.0011 19.5 16.4 0.056 14.0 10.0 3.3 1 1 2 3 3 3 2 Vacuolar (H+)-ATPase G subunit Rotamase PF00639.21 gi|121638809|ref|YP_979033.1| - 1.8 9.6 6.2 9.3 7.3 6.1 2.5 1 1 0 1 1 1 0 PPIC-type PPIASE domain YkyA PF10368.9 gi|121638809|ref|YP_979033.1| - 1.8 8.2 8.4 4.9 6.8 1.5 2.2 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein FIVAR PF07554.13 gi|121638809|ref|YP_979033.1| - 2 9.2 7.1 2 9.2 0.5 3.1 2 2 0 2 2 2 0 FIVAR domain DUF3552 PF12072.8 gi|121638809|ref|YP_979033.1| - 2.1 7.7 21.8 35 3.7 15.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF3552) DUF883 PF05957.13 gi|121638809|ref|YP_979033.1| - 2.1 9.0 21.7 0.25 12.0 7.1 3.4 1 1 3 4 4 4 0 Bacterial protein of unknown function (DUF883) vATP-synt_E PF01991.18 gi|121638809|ref|YP_979033.1| - 2.5 7.4 15.3 1.2 8.5 1.4 2.7 1 1 2 3 3 3 0 ATP synthase (E/31 kDa) subunit SCAB_CC PF16712.5 gi|121638809|ref|YP_979033.1| - 9.1 6.1 14.3 3.9 7.3 8.2 2.8 1 1 2 3 3 3 0 Coiled-coil regions of plant-specific actin-binding protein Thioesterase PF00975.20 gi|121638810|ref|YP_979034.1| - 2.6e-61 207.7 0.0 2.9e-61 207.5 0.0 1.0 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 gi|121638810|ref|YP_979034.1| - 1.4e-08 35.6 0.5 1.9e-08 35.2 0.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121638810|ref|YP_979034.1| - 9e-08 32.1 0.1 5.7e-05 22.9 0.1 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121638810|ref|YP_979034.1| - 1.1e-05 24.8 0.0 0.0001 21.7 0.0 2.0 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 gi|121638810|ref|YP_979034.1| - 0.0035 17.2 0.0 0.0087 15.9 0.0 1.8 1 1 1 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 gi|121638810|ref|YP_979034.1| - 0.0036 16.9 0.0 1.5 8.3 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Esterase PF00756.20 gi|121638810|ref|YP_979034.1| - 0.0056 16.4 0.0 0.0091 15.7 0.0 1.3 1 0 0 1 1 1 1 Putative esterase PGAP1 PF07819.13 gi|121638810|ref|YP_979034.1| - 0.014 15.1 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_2 PF02230.16 gi|121638810|ref|YP_979034.1| - 0.023 14.5 0.0 0.039 13.8 0.0 1.4 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase Chlorophyllase PF07224.11 gi|121638810|ref|YP_979034.1| - 0.12 11.4 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase DUF1057 PF06342.12 gi|121638810|ref|YP_979034.1| - 0.14 11.1 0.0 0.31 10.0 0.0 1.6 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1057) Chlorophyllase2 PF12740.7 gi|121638810|ref|YP_979034.1| - 0.19 10.6 0.0 0.27 10.1 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme AMP-binding PF00501.28 gi|121638812|ref|YP_979036.1| - 4.6e-77 259.4 0.0 5.5e-77 259.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|121638812|ref|YP_979036.1| - 0.048 14.0 0.0 0.089 13.1 0.0 1.4 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain Acyl_transf_1 PF00698.21 gi|121638813|ref|YP_979037.1| - 6.6e-119 397.1 0.1 1.2e-118 396.2 0.1 1.4 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121638813|ref|YP_979037.1| - 9e-94 313.8 0.1 2.3e-93 312.4 0.1 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121638813|ref|YP_979037.1| - 1.8e-61 207.2 0.0 3.2e-61 206.4 0.0 1.5 1 0 0 1 1 1 1 KR domain Ketoacyl-synt_C PF02801.22 gi|121638813|ref|YP_979037.1| - 9.2e-46 154.7 0.1 2.6e-45 153.3 0.1 1.9 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain PP-binding PF00550.25 gi|121638813|ref|YP_979037.1| - 1.9e-30 105.0 0.1 8.7e-16 58.0 0.0 2.8 2 0 0 2 2 2 2 Phosphopantetheine attachment site PS-DH PF14765.6 gi|121638813|ref|YP_979037.1| - 1.2e-16 60.9 2.8 2.1e-16 60.1 2.8 1.4 1 0 0 1 1 1 1 Polyketide synthase dehydratase KAsynt_C_assoc PF16197.5 gi|121638813|ref|YP_979037.1| - 1.8e-16 60.6 0.0 4.6e-16 59.3 0.0 1.7 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Thiolase_N PF00108.23 gi|121638813|ref|YP_979037.1| - 1.9e-05 24.2 1.0 0.00012 21.5 0.2 2.8 3 1 0 3 3 3 1 Thiolase, N-terminal domain adh_short PF00106.25 gi|121638813|ref|YP_979037.1| - 0.00042 19.8 0.2 0.0092 15.5 0.2 2.7 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638813|ref|YP_979037.1| - 0.0035 16.9 0.0 0.17 11.4 0.0 2.7 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Acyl_transf_1 PF00698.21 gi|121638814|ref|YP_979038.1| - 8.9e-110 367.1 0.1 1.8e-109 366.1 0.1 1.5 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121638814|ref|YP_979038.1| - 1e-97 326.7 0.2 2.1e-97 325.7 0.2 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121638814|ref|YP_979038.1| - 1.2e-47 162.2 1.2 1.9e-46 158.2 0.0 2.4 2 0 0 2 2 2 1 KR domain Ketoacyl-synt_C PF02801.22 gi|121638814|ref|YP_979038.1| - 2e-41 140.7 2.9 3.3e-41 140.0 0.9 2.4 3 0 0 3 3 2 1 Beta-ketoacyl synthase, C-terminal domain adh_short PF00106.25 gi|121638814|ref|YP_979038.1| - 5.2e-13 48.9 0.0 1.2e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 short chain dehydrogenase PP-binding PF00550.25 gi|121638814|ref|YP_979038.1| - 1.3e-12 47.8 0.0 3.3e-12 46.6 0.0 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site KAsynt_C_assoc PF16197.5 gi|121638814|ref|YP_979038.1| - 2.9e-12 47.0 0.0 6.8e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Thiolase_N PF00108.23 gi|121638814|ref|YP_979038.1| - 6.9e-06 25.6 0.1 6.6e-05 22.4 0.1 2.6 3 0 0 3 3 3 1 Thiolase, N-terminal domain NmrA PF05368.13 gi|121638814|ref|YP_979038.1| - 0.00017 21.2 0.0 0.0004 20.0 0.0 1.5 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|121638814|ref|YP_979038.1| - 0.00019 21.0 0.0 0.00033 20.2 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121638814|ref|YP_979038.1| - 0.00025 21.0 2.0 0.00047 20.1 0.0 2.5 3 0 0 3 3 2 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 gi|121638814|ref|YP_979038.1| - 0.0044 16.2 0.0 0.007 15.5 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein SAT PF16073.5 gi|121638814|ref|YP_979038.1| - 0.016 15.0 0.7 3.9 7.1 0.0 2.8 1 1 1 2 2 2 0 Starter unit:ACP transacylase in aflatoxin biosynthesis F420_oxidored PF03807.17 gi|121638814|ref|YP_979038.1| - 0.046 14.3 0.1 0.17 12.5 0.1 2.0 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|121638814|ref|YP_979038.1| - 0.077 13.3 0.3 0.22 11.8 0.0 2.0 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 gi|121638814|ref|YP_979038.1| - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Acyl_transf_1 PF00698.21 gi|121638815|ref|YP_979039.1| - 4.2e-103 345.2 0.0 7.5e-103 344.4 0.0 1.4 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121638815|ref|YP_979039.1| - 7.1e-95 317.4 0.0 1.4e-94 316.4 0.0 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121638815|ref|YP_979039.1| - 2.4e-62 210.0 0.5 6.2e-62 208.7 0.5 1.7 1 0 0 1 1 1 1 KR domain PS-DH PF14765.6 gi|121638815|ref|YP_979039.1| - 1.2e-51 175.7 6.1 3.5e-51 174.2 6.1 1.8 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121638815|ref|YP_979039.1| - 7.5e-43 145.3 1.0 4.8e-42 142.7 0.4 2.8 3 0 0 3 3 3 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N_2 PF13602.6 gi|121638815|ref|YP_979039.1| - 1.7e-23 84.2 0.4 9.7e-23 81.7 0.2 2.6 2 0 0 2 2 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|121638815|ref|YP_979039.1| - 7.9e-21 74.4 0.4 4.5e-20 72.0 0.2 2.4 2 0 0 2 2 2 1 Zinc-binding dehydrogenase adh_short PF00106.25 gi|121638815|ref|YP_979039.1| - 3.8e-12 46.1 0.1 1.3e-11 44.3 0.1 1.9 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638815|ref|YP_979039.1| - 2.1e-11 43.8 0.5 5.5e-11 42.5 0.5 1.6 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase PP-binding PF00550.25 gi|121638815|ref|YP_979039.1| - 2.8e-11 43.6 0.1 8.2e-11 42.1 0.1 1.9 1 0 0 1 1 1 1 Phosphopantetheine attachment site KAsynt_C_assoc PF16197.5 gi|121638815|ref|YP_979039.1| - 3.1e-08 34.0 0.0 7.6e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension ADH_N PF08240.12 gi|121638815|ref|YP_979039.1| - 4.6e-06 26.5 0.7 1.2e-05 25.1 0.7 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Thiolase_N PF00108.23 gi|121638815|ref|YP_979039.1| - 3e-05 23.5 0.1 0.00013 21.5 0.1 2.0 2 0 0 2 2 2 1 Thiolase, N-terminal domain SAT PF16073.5 gi|121638815|ref|YP_979039.1| - 0.0095 15.7 1.0 0.26 11.0 0.7 2.9 2 1 0 2 2 2 1 Starter unit:ACP transacylase in aflatoxin biosynthesis Sigma70_ECF PF07638.11 gi|121638815|ref|YP_979039.1| - 0.14 12.1 0.1 0.48 10.3 0.0 1.8 2 0 0 2 2 2 0 ECF sigma factor ketoacyl-synt PF00109.26 gi|121638816|ref|YP_979040.1| - 3.2e-96 321.8 0.1 7e-96 320.7 0.1 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121638816|ref|YP_979040.1| - 9.8e-96 321.0 1.3 2e-95 320.0 1.3 1.5 1 0 0 1 1 1 1 Acyl transferase domain PS-DH PF14765.6 gi|121638816|ref|YP_979040.1| - 9.4e-62 208.9 2.6 2e-61 207.9 1.8 2.0 2 0 0 2 2 2 1 Polyketide synthase dehydratase KR PF08659.10 gi|121638816|ref|YP_979040.1| - 2.6e-56 190.4 1.0 6.8e-56 189.0 0.2 2.2 2 0 0 2 2 2 1 KR domain Ketoacyl-synt_C PF02801.22 gi|121638816|ref|YP_979040.1| - 4.3e-42 142.9 0.3 1.7e-41 140.9 0.2 2.2 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 gi|121638816|ref|YP_979040.1| - 1.6e-11 44.6 0.0 3.4e-11 43.6 0.0 1.5 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension adh_short_C2 PF13561.6 gi|121638816|ref|YP_979040.1| - 7.1e-11 42.1 0.2 5.4e-10 39.2 0.0 2.3 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121638816|ref|YP_979040.1| - 3.7e-10 39.6 0.0 1e-09 38.1 0.0 1.7 1 0 0 1 1 1 1 short chain dehydrogenase PP-binding PF00550.25 gi|121638816|ref|YP_979040.1| - 2.2e-08 34.3 0.0 6.8e-08 32.8 0.0 2.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site Thiolase_N PF00108.23 gi|121638816|ref|YP_979040.1| - 1.8e-06 27.5 0.1 1.5e-05 24.5 0.1 2.4 1 1 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|121638817|ref|YP_979041.1| - 6.4e-74 248.7 0.1 4.9e-73 245.8 0.0 2.3 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121638817|ref|YP_979041.1| - 4.6e-47 161.1 0.0 7.6e-47 160.4 0.0 1.4 1 0 0 1 1 1 1 Acyl transferase domain Ketoacyl-synt_C PF02801.22 gi|121638817|ref|YP_979041.1| - 2.9e-43 146.6 1.0 3.3e-42 143.2 1.0 2.6 3 0 0 3 3 3 1 Beta-ketoacyl synthase, C-terminal domain Condensation PF00668.20 gi|121638817|ref|YP_979041.1| - 1.5e-26 93.1 0.0 2.6e-26 92.3 0.0 1.3 1 0 0 1 1 1 1 Condensation domain KAsynt_C_assoc PF16197.5 gi|121638817|ref|YP_979041.1| - 1.4e-16 60.9 0.0 2.8e-16 60.0 0.0 1.5 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121638817|ref|YP_979041.1| - 1.7e-13 50.7 0.1 7.1e-13 48.7 0.0 2.3 2 0 0 2 2 2 1 Phosphopantetheine attachment site Thiolase_N PF00108.23 gi|121638817|ref|YP_979041.1| - 0.00014 21.4 0.1 0.00025 20.5 0.1 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain ABC_tran PF00005.27 gi|121638818|ref|YP_979042.1| - 1e-27 97.3 0.0 1.6e-27 96.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121638818|ref|YP_979042.1| - 7.9e-09 35.7 0.1 0.0014 18.5 0.0 2.6 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|121638818|ref|YP_979042.1| - 0.00014 21.5 0.1 0.00034 20.3 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF4162 PF13732.6 gi|121638818|ref|YP_979042.1| - 0.019 15.7 0.0 0.056 14.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|121638818|ref|YP_979042.1| - 0.021 15.3 0.0 0.036 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|121638818|ref|YP_979042.1| - 0.051 13.2 0.0 0.086 12.5 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|121638818|ref|YP_979042.1| - 0.066 13.5 0.2 0.67 10.2 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|121638818|ref|YP_979042.1| - 0.068 13.7 0.0 0.23 12.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|121638818|ref|YP_979042.1| - 0.077 13.4 0.1 0.12 12.7 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain ATPase PF06745.13 gi|121638818|ref|YP_979042.1| - 0.09 12.1 0.1 9.5 5.5 0.0 2.2 2 0 0 2 2 2 0 KaiC ABC2_membrane_3 PF12698.7 gi|121638819|ref|YP_979043.1| - 2.5e-07 30.1 13.3 2.5e-07 30.1 13.3 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|121638819|ref|YP_979043.1| - 0.00017 21.1 16.8 0.00017 21.1 16.8 2.1 2 1 0 2 2 2 1 ABC-2 type transporter DUF3021 PF11457.8 gi|121638819|ref|YP_979043.1| - 3.1 8.1 10.0 0.69 10.2 6.1 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3021) ABC2_membrane PF01061.24 gi|121638820|ref|YP_979044.1| - 4.6e-13 49.1 20.8 6.5e-13 48.6 20.8 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|121638820|ref|YP_979044.1| - 2.5e-07 30.1 18.0 2.5e-07 30.1 18.0 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|121638820|ref|YP_979044.1| - 0.00097 18.5 19.5 0.00097 18.5 19.5 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|121638820|ref|YP_979044.1| - 0.0022 18.0 11.4 0.0022 18.0 11.4 1.6 2 0 0 2 2 2 1 ABC-2 family transporter protein PapA_C PF16911.5 gi|121638821|ref|YP_979045.1| - 3.3e-26 91.8 0.0 8.2e-26 90.5 0.0 1.7 1 0 0 1 1 1 1 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus Condensation PF00668.20 gi|121638821|ref|YP_979045.1| - 6.8e-07 28.3 0.0 8.3e-07 28.0 0.0 1.2 1 0 0 1 1 1 1 Condensation domain WES_acyltransf PF03007.16 gi|121638821|ref|YP_979045.1| - 0.075 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Acyl_transf_1 PF00698.21 gi|121638822|ref|YP_979046.1| - 1.6e-114 382.7 6.2 2.9e-114 381.9 6.2 1.4 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121638822|ref|YP_979046.1| - 2e-93 312.6 0.1 2e-93 312.6 0.1 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121638822|ref|YP_979046.1| - 9.7e-57 191.8 0.3 2e-55 187.5 0.0 2.7 2 0 0 2 2 2 1 KR domain PS-DH PF14765.6 gi|121638822|ref|YP_979046.1| - 2.1e-53 181.5 4.6 4.4e-53 180.4 4.6 1.6 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121638822|ref|YP_979046.1| - 3.9e-41 139.8 0.4 1e-40 138.4 0.4 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N PF00107.26 gi|121638822|ref|YP_979046.1| - 2.4e-22 79.3 0.7 7.4e-21 74.5 0.1 3.0 3 0 0 3 3 3 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121638822|ref|YP_979046.1| - 7.7e-21 75.5 0.1 1.5e-19 71.4 0.0 2.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121638822|ref|YP_979046.1| - 7.8e-16 58.5 0.0 1.7e-15 57.4 0.0 1.6 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121638822|ref|YP_979046.1| - 2.5e-10 40.6 0.2 1.3e-09 38.3 0.0 2.4 3 0 0 3 3 3 1 Phosphopantetheine attachment site adh_short PF00106.25 gi|121638822|ref|YP_979046.1| - 1.5e-08 34.3 0.0 1.9e-07 30.8 0.0 2.5 2 0 0 2 2 2 1 short chain dehydrogenase Thiolase_N PF00108.23 gi|121638822|ref|YP_979046.1| - 5.8e-06 25.9 1.3 9.1e-06 25.2 0.5 1.7 2 0 0 2 2 2 1 Thiolase, N-terminal domain ADH_N PF08240.12 gi|121638822|ref|YP_979046.1| - 2.3e-05 24.2 0.2 8.9e-05 22.3 0.1 2.2 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ThiF PF00899.21 gi|121638822|ref|YP_979046.1| - 0.14 11.5 0.1 0.31 10.3 0.1 1.6 1 0 0 1 1 1 0 ThiF family AMP-binding PF00501.28 gi|121638823|ref|YP_979047.1| - 2.7e-70 237.1 0.0 3.3e-70 236.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Mur_ligase_C PF02875.21 gi|121638823|ref|YP_979047.1| - 0.036 14.3 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Mur ligase family, glutamate ligase domain MMPL PF03176.15 gi|121638824|ref|YP_979048.1| - 5.9e-75 252.3 52.9 1.4e-63 214.8 19.7 3.0 2 1 0 2 2 2 2 MMPL family DUF1664 PF07889.12 gi|121638824|ref|YP_979048.1| - 0.023 14.7 0.3 4 7.5 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 gi|121638824|ref|YP_979048.1| - 0.091 13.1 0.2 3.3 8.1 0.0 2.9 2 1 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Serine_rich PF08824.10 gi|121638824|ref|YP_979048.1| - 0.12 12.3 0.5 9.9 6.1 0.0 2.3 2 0 0 2 2 2 0 Serine rich protein interaction domain DUF948 PF06103.11 gi|121638824|ref|YP_979048.1| - 0.12 12.6 0.2 0.12 12.6 0.2 3.8 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 gi|121638824|ref|YP_979048.1| - 0.17 12.3 0.1 64 4.1 0.0 3.1 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Fzo_mitofusin PF04799.13 gi|121638824|ref|YP_979048.1| - 0.27 10.8 0.0 0.27 10.8 0.0 2.5 3 0 0 3 3 3 0 fzo-like conserved region rve PF00665.26 gi|121638825|ref|YP_979049.1| - 1e-16 61.2 0.0 2e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain Sigma70_r4_2 PF08281.12 gi|121638825|ref|YP_979049.1| - 5.2e-06 26.0 0.0 1.5e-05 24.6 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|121638825|ref|YP_979049.1| - 0.00024 20.8 0.1 0.00067 19.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.19 gi|121638825|ref|YP_979049.1| - 0.00048 19.6 0.0 0.0009 18.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 gi|121638825|ref|YP_979049.1| - 0.00077 19.2 0.0 0.0021 17.8 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 gi|121638825|ref|YP_979049.1| - 0.0012 18.9 0.0 0.0025 17.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_AsnC-type PF13404.6 gi|121638825|ref|YP_979049.1| - 0.0047 16.7 0.0 5.1 7.0 0.0 2.8 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain rve_3 PF13683.6 gi|121638825|ref|YP_979049.1| - 0.0055 16.5 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_29 PF13551.6 gi|121638825|ref|YP_979049.1| - 0.02 14.9 0.1 0.1 12.6 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn helix MarR_2 PF12802.7 gi|121638825|ref|YP_979049.1| - 0.031 14.2 0.3 0.53 10.2 0.0 3.0 4 0 0 4 4 4 0 MarR family HTH_24 PF13412.6 gi|121638825|ref|YP_979049.1| - 0.034 13.7 0.1 2.4 7.8 0.1 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding TnsD PF15978.5 gi|121638825|ref|YP_979049.1| - 0.046 12.7 0.0 0.064 12.2 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Sigma70_r4 PF04545.16 gi|121638825|ref|YP_979049.1| - 0.082 12.4 0.0 0.21 11.2 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_IclR PF09339.10 gi|121638825|ref|YP_979049.1| - 0.14 12.0 0.1 3.4 7.5 0.0 2.4 2 0 0 2 2 2 0 IclR helix-turn-helix domain RPA_C PF08784.11 gi|121638825|ref|YP_979049.1| - 0.23 12.1 0.0 0.41 11.3 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal IstB_IS21 PF01695.17 gi|121638826|ref|YP_979050.1| - 3.6e-09 36.6 0.0 5.6e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein LppX_LprAFG PF07161.13 gi|121638827|ref|YP_979051.1| - 4.2e-59 199.6 1.6 4.9e-59 199.4 1.6 1.0 1 0 0 1 1 1 1 LppX_LprAFG lipoprotein DUF3108 PF11306.8 gi|121638827|ref|YP_979051.1| - 0.0028 17.7 0.1 0.014 15.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3108) ketoacyl-synt PF00109.26 gi|121638828|ref|YP_979052.1| - 3e-92 308.8 1.1 3e-92 308.8 1.1 2.2 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121638828|ref|YP_979052.1| - 1.5e-59 201.0 3.2 1.5e-59 201.0 3.2 3.6 4 1 0 4 4 4 1 KR domain Acyl_transf_1 PF00698.21 gi|121638828|ref|YP_979052.1| - 9.3e-59 199.5 2.4 1.6e-58 198.7 2.4 1.4 1 0 0 1 1 1 1 Acyl transferase domain PS-DH PF14765.6 gi|121638828|ref|YP_979052.1| - 5.3e-58 196.6 4.0 5.3e-58 196.6 4.0 2.0 2 0 0 2 2 2 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121638828|ref|YP_979052.1| - 8.7e-46 154.8 2.8 3.2e-45 153.0 2.8 2.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N_2 PF13602.6 gi|121638828|ref|YP_979052.1| - 2.6e-16 60.9 1.5 1.4e-15 58.5 0.0 3.1 4 0 0 4 4 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|121638828|ref|YP_979052.1| - 8.8e-16 58.1 0.1 1.4e-13 51.0 0.1 3.7 3 0 0 3 3 3 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121638828|ref|YP_979052.1| - 5.6e-15 55.8 0.0 1.3e-14 54.6 0.0 1.7 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension adh_short PF00106.25 gi|121638828|ref|YP_979052.1| - 9e-15 54.6 0.8 9e-15 54.6 0.8 3.4 4 0 0 4 4 4 1 short chain dehydrogenase PP-binding PF00550.25 gi|121638828|ref|YP_979052.1| - 9.5e-15 54.7 0.0 2.4e-14 53.4 0.0 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site adh_short_C2 PF13561.6 gi|121638828|ref|YP_979052.1| - 1e-10 41.6 0.7 1e-10 41.6 0.7 2.5 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase ADH_N PF08240.12 gi|121638828|ref|YP_979052.1| - 7e-07 29.1 0.1 2.1e-06 27.6 0.1 1.8 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Thiolase_N PF00108.23 gi|121638828|ref|YP_979052.1| - 1.9e-06 27.4 0.9 5.9e-06 25.8 0.2 2.1 2 0 0 2 2 2 1 Thiolase, N-terminal domain Docking PF08990.11 gi|121638828|ref|YP_979052.1| - 2.2e-06 27.1 1.0 5.3e-06 25.9 1.0 1.7 1 0 0 1 1 1 1 Erythronolide synthase docking Epimerase PF01370.21 gi|121638828|ref|YP_979052.1| - 3.7e-05 23.3 0.3 7.7e-05 22.3 0.3 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|121638828|ref|YP_979052.1| - 0.023 13.8 0.1 0.059 12.5 0.0 1.7 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|121638828|ref|YP_979052.1| - 0.06 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase YAcAr PF10686.9 gi|121638828|ref|YP_979052.1| - 0.081 12.9 4.7 1 9.4 0.4 3.2 2 0 0 2 2 2 0 YspA, cpYpsA-related SLOG family AMP-binding PF00501.28 gi|121638829|ref|YP_979053.1| - 1.5e-63 214.8 0.0 2.2e-63 214.3 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121638829|ref|YP_979053.1| - 2.3e-11 44.5 0.2 9e-11 42.6 0.1 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 gi|121638829|ref|YP_979053.1| - 2.1e-07 31.2 0.0 4.5e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF4400 PF14348.6 gi|121638829|ref|YP_979053.1| - 0.024 14.1 0.2 0.048 13.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) DUF98 PF01947.16 gi|121638830|ref|YP_979054.1| - 1.3e-12 48.0 0.0 1.6e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase Plk4_PB1 PF18190.1 gi|121638830|ref|YP_979054.1| - 0.13 12.4 0.0 0.65 10.2 0.1 1.9 2 0 0 2 2 2 0 Polo-like Kinase 4 Polo Box 1 AMP-binding PF00501.28 gi|121638831|ref|YP_979055.1| - 2.5e-76 257.0 0.0 3e-76 256.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|121638831|ref|YP_979055.1| - 0.0015 18.8 0.2 0.0029 17.9 0.2 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Mur_ligase_C PF02875.21 gi|121638831|ref|YP_979055.1| - 0.041 14.1 0.0 0.12 12.6 0.0 1.8 1 0 0 1 1 1 0 Mur ligase family, glutamate ligase domain DUF4012 PF13196.6 gi|121638831|ref|YP_979055.1| - 0.049 14.1 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4012) Bac_luciferase PF00296.20 gi|121638832|ref|YP_979056.1| - 2e-47 162.2 5.3 2.5e-47 161.8 5.3 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Methyltransf_11 PF08241.12 gi|121638833|ref|YP_979057.1| - 7.2e-24 84.3 0.0 1.3e-23 83.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121638833|ref|YP_979057.1| - 3.5e-20 72.5 0.0 6e-20 71.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638833|ref|YP_979057.1| - 3.3e-15 56.2 0.0 4.1e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638833|ref|YP_979057.1| - 3.8e-13 50.0 0.0 6.6e-13 49.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121638833|ref|YP_979057.1| - 9.2e-10 38.2 0.0 1.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|121638833|ref|YP_979057.1| - 1.4e-07 31.5 0.0 1.9e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 gi|121638833|ref|YP_979057.1| - 4.3e-05 22.3 0.0 4.9e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase MetW PF07021.12 gi|121638833|ref|YP_979057.1| - 0.00028 20.5 0.0 0.00044 19.9 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|121638833|ref|YP_979057.1| - 0.00068 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 gi|121638833|ref|YP_979057.1| - 0.068 12.7 0.0 0.15 11.6 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase small domain Pox_MCEL PF03291.16 gi|121638833|ref|YP_979057.1| - 0.17 10.9 0.0 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 mRNA capping enzyme DUF938 PF06080.12 gi|121638833|ref|YP_979057.1| - 0.18 11.5 0.0 0.28 10.9 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Sacchrp_dh_NADP PF03435.18 gi|121638834|ref|YP_979058.1| - 1.4e-09 38.3 0.0 2.2e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|121638834|ref|YP_979058.1| - 0.031 14.2 0.1 0.066 13.1 0.0 1.6 2 0 0 2 2 2 0 NAD(P)H-binding KR PF08659.10 gi|121638834|ref|YP_979058.1| - 0.11 12.4 0.3 0.5 10.3 0.1 1.9 2 0 0 2 2 2 0 KR domain Methyltransf_25 PF13649.6 gi|121638835|ref|YP_979059.1| - 3.3e-11 43.7 0.0 5.6e-11 43.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638835|ref|YP_979059.1| - 1.9e-09 38.0 0.0 3.2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638835|ref|YP_979059.1| - 6.9e-09 36.3 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638835|ref|YP_979059.1| - 9.1e-08 32.1 0.0 1e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|121638835|ref|YP_979059.1| - 3.6e-06 26.1 0.0 4.6e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_31 PF13847.6 gi|121638835|ref|YP_979059.1| - 0.0073 16.1 0.0 0.022 14.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|121638835|ref|YP_979059.1| - 0.052 12.6 0.0 0.067 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_PK PF05891.12 gi|121638835|ref|YP_979059.1| - 0.18 11.3 0.0 0.24 10.9 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase DUF938 PF06080.12 gi|121638835|ref|YP_979059.1| - 0.21 11.3 0.0 0.46 10.2 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_21 PF05050.12 gi|121638836|ref|YP_979060.1| - 1.5e-15 57.7 0.0 1.9e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Peptidase_M35 PF02102.15 gi|121638836|ref|YP_979060.1| - 0.02 13.8 0.0 0.027 13.3 0.0 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Methyltransf_25 PF13649.6 gi|121638836|ref|YP_979060.1| - 0.1 13.3 0.0 0.18 12.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 gi|121638836|ref|YP_979060.1| - 0.14 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein T2SSM_b PF10741.9 gi|121638836|ref|YP_979060.1| - 0.14 12.0 0.1 0.41 10.5 0.0 1.8 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b Methyltransf_21 PF05050.12 gi|121638837|ref|YP_979061.1| - 2.3e-16 60.3 0.0 2.9e-16 60.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Glycos_transf_2 PF00535.26 gi|121638838|ref|YP_979062.1| - 4e-24 85.3 0.0 1.3e-23 83.6 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121638838|ref|YP_979062.1| - 3.5e-14 53.2 0.0 4.2e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|121638838|ref|YP_979062.1| - 3.7e-06 26.6 0.0 7.3e-06 25.6 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 NTP_transf_3 PF12804.7 gi|121638838|ref|YP_979062.1| - 0.015 15.7 0.0 0.019 15.4 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain Glyco_tranf_2_4 PF13704.6 gi|121638838|ref|YP_979062.1| - 0.026 15.0 0.1 0.13 12.8 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase family 2 CmcI PF04989.12 gi|121638840|ref|YP_979064.1| - 3.4e-72 242.5 0.0 3.9e-72 242.3 0.0 1.0 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.6 gi|121638840|ref|YP_979064.1| - 2e-05 25.5 0.0 4e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain DDE_Tnp_1 PF01609.21 gi|121638842|ref|YP_979066.1| - 1.7e-07 31.1 0.2 4.7e-07 29.7 0.2 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|121638842|ref|YP_979066.1| - 5.7e-05 23.3 0.0 7.7e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|121638842|ref|YP_979066.1| - 0.003 17.9 0.6 0.0045 17.3 0.6 1.3 1 0 0 1 1 1 1 Transposase DDE domain UDPGT PF00201.18 gi|121638843|ref|YP_979067.1| - 3e-08 32.9 0.0 4.1e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 gi|121638843|ref|YP_979067.1| - 2.7e-06 27.4 0.1 4.1e-06 26.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 gi|121638843|ref|YP_979067.1| - 0.0026 17.0 0.0 1.9 7.7 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 1 ArsP_1 PF03773.13 gi|121638844|ref|YP_979068.1| - 1.1e-85 287.3 22.7 1.1e-85 287.3 22.7 1.7 2 0 0 2 2 2 1 Predicted permease Formyl_trans_N PF00551.19 gi|121638845|ref|YP_979069.1| - 9.6e-37 126.5 0.0 1.2e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase ACT PF01842.25 gi|121638845|ref|YP_979069.1| - 1e-10 41.2 0.0 3.8e-10 39.3 0.0 2.1 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 gi|121638845|ref|YP_979069.1| - 0.0071 16.3 0.0 0.038 14.0 0.0 2.1 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|121638845|ref|YP_979069.1| - 0.031 14.9 0.0 0.072 13.7 0.0 1.6 1 0 0 1 1 1 0 ACT domain CTP_transf_like PF01467.26 gi|121638846|ref|YP_979070.1| - 4.9e-19 68.9 0.0 5.7e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 gi|121638846|ref|YP_979070.1| - 1.2e-06 28.3 0.0 1.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Citrate lyase ligase C-terminal domain Pantoate_ligase PF02569.15 gi|121638846|ref|YP_979070.1| - 0.024 13.8 0.0 0.039 13.2 0.0 1.3 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase ATP-sulfurylase PF01747.17 gi|121638846|ref|YP_979070.1| - 0.1 12.0 0.0 0.15 11.6 0.0 1.3 1 1 0 1 1 1 0 ATP-sulfurylase Cons_hypoth95 PF03602.15 gi|121638847|ref|YP_979071.1| - 2.2e-47 161.1 0.0 2.5e-47 160.9 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|121638847|ref|YP_979071.1| - 4.7e-06 26.2 0.0 6e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain RsmJ PF04378.13 gi|121638847|ref|YP_979071.1| - 0.00054 19.3 0.0 0.00073 18.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ PrmA PF06325.13 gi|121638847|ref|YP_979071.1| - 0.0045 16.4 0.1 0.0062 16.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|121638847|ref|YP_979071.1| - 0.0077 16.9 0.1 0.011 16.4 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|121638847|ref|YP_979071.1| - 0.02 14.6 0.0 5.7 6.6 0.0 2.1 2 0 0 2 2 2 0 DNA methylase Methyltransf_24 PF13578.6 gi|121638847|ref|YP_979071.1| - 0.13 13.3 0.0 0.2 12.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638847|ref|YP_979071.1| - 0.14 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain CPSase_L_D2 PF02786.17 gi|121638848|ref|YP_979072.1| - 9e-67 224.7 0.1 1.3e-66 224.1 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain PYC_OADA PF02436.18 gi|121638848|ref|YP_979072.1| - 2.5e-54 184.0 0.0 6.2e-54 182.8 0.0 1.7 2 0 0 2 2 2 1 Conserved carboxylase domain Biotin_carb_N PF00289.22 gi|121638848|ref|YP_979072.1| - 2.4e-39 134.3 0.1 5.3e-39 133.2 0.1 1.6 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|121638848|ref|YP_979072.1| - 1.4e-35 121.6 0.0 3e-35 120.6 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain HMGL-like PF00682.19 gi|121638848|ref|YP_979072.1| - 3.1e-26 92.5 0.0 7.1e-26 91.3 0.0 1.7 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|121638848|ref|YP_979072.1| - 2.2e-14 53.1 1.2 5e-14 51.9 1.2 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|121638848|ref|YP_979072.1| - 3.1e-08 33.3 1.1 0.0021 17.9 0.3 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like Dala_Dala_lig_C PF07478.13 gi|121638848|ref|YP_979072.1| - 1.4e-06 28.0 0.0 3.1e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus RnfC_N PF13375.6 gi|121638848|ref|YP_979072.1| - 0.00011 22.0 1.2 0.00027 20.9 1.2 1.6 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain ATP-grasp PF02222.22 gi|121638848|ref|YP_979072.1| - 0.00084 18.9 0.0 0.0014 18.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GCV_H PF01597.19 gi|121638848|ref|YP_979072.1| - 0.0041 17.0 0.3 0.01 15.7 0.3 1.6 1 0 0 1 1 1 1 Glycine cleavage H-protein ATP-grasp_3 PF02655.14 gi|121638848|ref|YP_979072.1| - 0.049 13.7 0.0 0.087 12.9 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain VKOR PF07884.14 gi|121638849|ref|YP_979073.1| - 2.5e-32 111.7 13.3 2.5e-32 111.7 13.3 1.7 2 0 0 2 2 2 1 Vitamin K epoxide reductase family FTR1 PF03239.14 gi|121638849|ref|YP_979073.1| - 0.43 9.7 14.1 0.11 11.7 9.2 2.3 2 1 0 2 2 2 0 Iron permease FTR1 family Thioredoxin_4 PF13462.6 gi|121638850|ref|YP_979074.1| - 2e-17 63.9 0.0 2.7e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|121638850|ref|YP_979074.1| - 1.4e-05 25.0 1.2 0.0013 18.5 0.0 2.2 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Multi_ubiq PF14452.6 gi|121638850|ref|YP_979074.1| - 0.0043 17.3 0.2 0.75 10.1 0.0 2.4 2 0 0 2 2 2 2 Multiubiquitin Abhydrolase_3 PF07859.13 gi|121638851|ref|YP_979075.1| - 3.1e-72 242.9 0.1 4.3e-72 242.4 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|121638851|ref|YP_979075.1| - 0.00032 19.7 0.0 0.00061 18.8 0.0 1.4 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 gi|121638851|ref|YP_979075.1| - 0.036 13.5 0.0 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 Prolyl oligopeptidase family Say1_Mug180 PF10340.9 gi|121638851|ref|YP_979075.1| - 0.051 12.4 0.0 0.097 11.5 0.0 1.3 1 1 0 1 1 1 0 Steryl acetyl hydrolase Aldo_ket_red PF00248.21 gi|121638852|ref|YP_979076.1| - 0.019 14.2 0.0 0.02 14.1 0.0 1.0 1 0 0 1 1 1 0 Aldo/keto reductase family Herpes_gI PF01688.17 gi|121638852|ref|YP_979076.1| - 0.2 11.5 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I Aldo_ket_red PF00248.21 gi|121638853|ref|YP_979077.1| - 3.1e-44 151.3 0.0 3e-42 144.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family DUF1524 PF07510.11 gi|121638854|ref|YP_979078.1| - 2.9e-12 46.6 0.0 3.4e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1524) HNH_4 PF13395.6 gi|121638854|ref|YP_979078.1| - 1.1e-06 28.4 0.0 1.8e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease Helicase_C PF00271.31 gi|121638855|ref|YP_979079.1| - 1.4e-22 80.1 0.0 1.5e-18 67.2 0.0 2.4 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 gi|121638855|ref|YP_979079.1| - 5.2e-18 65.4 0.1 1.5e-17 63.9 0.1 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|121638855|ref|YP_979079.1| - 4.2e-10 39.9 0.0 8.1e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RecG_wedge PF17191.4 gi|121638855|ref|YP_979079.1| - 1.1e-06 28.3 0.0 4.6e-06 26.3 0.0 1.8 2 0 0 2 2 2 1 RecG wedge domain AAA_30 PF13604.6 gi|121638855|ref|YP_979079.1| - 0.00013 21.8 2.1 0.00028 20.7 1.4 2.0 2 0 0 2 2 2 1 AAA domain SNF2_N PF00176.23 gi|121638855|ref|YP_979079.1| - 0.0076 15.0 0.1 0.016 13.9 0.0 1.5 2 0 0 2 2 2 1 SNF2 family N-terminal domain tRNA_anti-codon PF01336.25 gi|121638855|ref|YP_979079.1| - 0.0084 16.1 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ERCC3_RAD25_C PF16203.5 gi|121638855|ref|YP_979079.1| - 0.16 11.2 0.0 0.26 10.5 0.0 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase Dak1_2 PF13684.6 gi|121638856|ref|YP_979080.1| - 1.2e-74 251.2 0.0 2e-74 250.5 0.0 1.3 1 0 0 1 1 1 1 Dihydroxyacetone kinase family Dak2 PF02734.17 gi|121638856|ref|YP_979080.1| - 4.5e-26 91.8 13.6 1.1e-25 90.5 13.6 1.7 1 0 0 1 1 1 1 DAK2 domain Ribosomal_S11 PF00411.19 gi|121638856|ref|YP_979080.1| - 3.1 8.2 9.4 0.17 12.3 0.6 3.1 2 1 1 3 3 3 0 Ribosomal protein S11 UDG PF03167.19 gi|121638857|ref|YP_979081.1| - 7.2e-18 65.0 0.0 1.1e-17 64.4 0.0 1.3 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily AIRS PF00586.24 gi|121638858|ref|YP_979082.1| - 1.3e-16 61.0 2.0 1.3e-16 61.0 2.0 1.9 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|121638858|ref|YP_979082.1| - 8.7e-06 25.9 0.4 1.6e-05 25.1 0.4 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Lactamase_B PF00753.27 gi|121638858|ref|YP_979082.1| - 0.029 14.4 0.1 0.064 13.3 0.1 1.6 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily OrfB_IS605 PF01385.19 gi|121638859|ref|YP_979083.1| - 1.6e-27 96.1 1.4 3.2e-27 95.1 1.4 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|121638859|ref|YP_979083.1| - 5.7e-14 51.8 0.4 1.3e-13 50.6 0.4 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|121638859|ref|YP_979083.1| - 2e-09 36.8 1.0 4.1e-09 35.8 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain Resolvase PF00239.21 gi|121638860|ref|YP_979084.1| - 6.5e-18 65.2 2.1 9e-18 64.8 2.1 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain Imm21 PF15589.6 gi|121638860|ref|YP_979084.1| - 0.028 14.5 0.1 0.18 11.9 0.0 1.9 2 0 0 2 2 2 0 Immunity protein 21 HTH_17 PF12728.7 gi|121638860|ref|YP_979084.1| - 0.041 14.1 0.1 0.087 13.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3515 PF12028.8 gi|121638861|ref|YP_979085.1| - 2.2e-54 183.5 6.3 2.7e-54 183.2 6.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3515) Dala_Dala_lig_C PF07478.13 gi|121638862|ref|YP_979086.1| - 1.5e-73 246.7 0.0 1.9e-73 246.4 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 gi|121638862|ref|YP_979086.1| - 1.2e-30 106.0 0.0 2e-30 105.3 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp PF02222.22 gi|121638862|ref|YP_979086.1| - 3.2e-08 33.3 0.0 2.3e-06 27.3 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|121638862|ref|YP_979086.1| - 3.6e-08 33.6 0.0 0.0044 17.1 0.0 2.1 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|121638862|ref|YP_979086.1| - 0.00044 19.9 0.0 0.0036 16.9 0.0 2.3 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|121638862|ref|YP_979086.1| - 0.00052 19.6 0.0 0.0086 15.6 0.0 2.3 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.11 gi|121638862|ref|YP_979086.1| - 0.00083 19.0 0.0 0.0097 15.5 0.0 2.0 2 0 0 2 2 2 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 gi|121638862|ref|YP_979086.1| - 0.0027 17.0 0.0 0.21 10.8 0.0 2.1 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp NAD_Gly3P_dh_N PF01210.23 gi|121638863|ref|YP_979087.1| - 3.8e-51 173.2 0.1 6.3e-51 172.5 0.1 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 gi|121638863|ref|YP_979087.1| - 3.5e-49 166.8 1.3 6.6e-49 165.9 1.3 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ApbA PF02558.16 gi|121638863|ref|YP_979087.1| - 1.5e-10 40.9 0.0 3.5e-10 39.7 0.0 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|121638863|ref|YP_979087.1| - 2e-07 31.5 0.0 1.5e-06 28.7 0.0 2.4 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|121638863|ref|YP_979087.1| - 1.9e-05 24.9 0.0 5.4e-05 23.4 0.0 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|121638863|ref|YP_979087.1| - 0.0012 18.7 0.3 0.0024 17.8 0.3 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|121638863|ref|YP_979087.1| - 0.0026 17.1 0.0 0.014 14.8 0.0 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|121638863|ref|YP_979087.1| - 0.0046 17.5 0.1 0.011 16.2 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|121638863|ref|YP_979087.1| - 0.025 15.1 0.1 0.066 13.7 0.1 2.0 1 1 0 1 1 1 0 XdhC Rossmann domain IlvN PF07991.12 gi|121638863|ref|YP_979087.1| - 0.041 13.5 0.0 0.2 11.2 0.0 2.0 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_8 PF13450.6 gi|121638863|ref|YP_979087.1| - 0.051 13.8 0.0 0.15 12.3 0.0 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|121638863|ref|YP_979087.1| - 0.061 12.6 1.4 0.08 12.2 0.2 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase CofC PF01983.16 gi|121638864|ref|YP_979088.1| - 6.9e-13 48.3 0.0 9.2e-13 47.9 0.0 1.1 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|121638864|ref|YP_979088.1| - 3.4e-09 37.2 3.6 4.6e-09 36.8 3.6 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|121638864|ref|YP_979088.1| - 0.0058 16.4 0.2 0.01 15.6 0.2 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) PP_kinase_C_1 PF17941.1 gi|121638865|ref|YP_979089.1| - 5e-75 250.6 0.0 3.7e-74 247.8 0.0 2.1 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 1 PP_kinase PF02503.17 gi|121638865|ref|YP_979089.1| - 1e-72 244.0 0.2 1.7e-72 243.3 0.2 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_C PF13090.6 gi|121638865|ref|YP_979089.1| - 7.8e-54 181.7 0.0 6.2e-53 178.8 0.0 2.2 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 2 PP_kinase_N PF13089.6 gi|121638865|ref|YP_979089.1| - 1.7e-36 124.8 0.0 4.2e-36 123.5 0.0 1.7 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 gi|121638865|ref|YP_979089.1| - 6.3e-13 48.8 0.0 1.5e-06 28.1 0.0 2.5 2 0 0 2 2 2 2 PLD-like domain NUDIX PF00293.28 gi|121638866|ref|YP_979090.1| - 2.8e-16 59.7 0.0 5.9e-16 58.7 0.0 1.5 1 0 0 1 1 1 1 NUDIX domain His_Phos_1 PF00300.22 gi|121638866|ref|YP_979090.1| - 9.7e-13 48.2 0.1 3.6e-12 46.4 0.1 1.8 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) Bac_DNA_binding PF00216.21 gi|121638867|ref|YP_979091.1| - 1.3e-26 92.6 0.2 1.3e-26 92.6 0.2 2.8 2 1 0 2 2 2 1 Bacterial DNA-binding protein HU-HIG PF18291.1 gi|121638867|ref|YP_979091.1| - 0.0026 17.8 1.3 0.0034 17.5 0.0 1.8 2 0 0 2 2 2 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 gi|121638867|ref|YP_979091.1| - 0.005 16.7 0.0 0.0091 15.9 0.0 1.4 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 gi|121638867|ref|YP_979091.1| - 0.015 15.5 0.1 0.031 14.4 0.1 1.5 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 gi|121638867|ref|YP_979091.1| - 0.045 13.9 0.0 0.082 13.1 0.0 1.4 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 Aconitase_C PF00694.19 gi|121638868|ref|YP_979092.1| - 8e-24 84.4 0.0 4.6e-23 82.0 0.0 1.9 1 1 0 1 1 1 1 Aconitase C-terminal domain Aconitase PF00330.20 gi|121638869|ref|YP_979093.1| - 5e-157 523.6 0.0 5.6e-157 523.4 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|121638869|ref|YP_979093.1| - 0.0014 17.5 0.0 0.002 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF521) IclR PF01614.18 gi|121638870|ref|YP_979094.1| - 7.6e-16 58.1 0.2 7.2e-14 51.7 0.2 2.3 1 1 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 gi|121638870|ref|YP_979094.1| - 5.2e-10 39.0 0.9 1.6e-09 37.4 0.5 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|121638870|ref|YP_979094.1| - 0.017 15.0 0.4 0.078 12.9 0.1 2.2 2 0 0 2 2 2 0 MarR family Putative_PNPOx PF01243.20 gi|121638872|ref|YP_979096.1| - 2.9e-21 75.4 0.0 4.7e-21 74.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|121638872|ref|YP_979096.1| - 1.6e-09 37.9 0.1 1.9e-09 37.6 0.1 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|121638872|ref|YP_979096.1| - 1.4e-05 24.7 0.0 2e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like tRNA-synt_1c PF00749.21 gi|121638873|ref|YP_979097.1| - 1.6e-75 254.0 0.0 2e-75 253.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain FAA_hydrolase PF01557.18 gi|121638874|ref|YP_979098.1| - 2.1e-68 230.2 0.0 2.5e-68 230.0 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|121638874|ref|YP_979098.1| - 3.5e-10 40.6 1.2 9.5e-10 39.2 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF2437) MFS_1 PF07690.16 gi|121638875|ref|YP_979099.1| - 1.2e-43 149.5 37.7 4.2e-43 147.6 30.5 2.1 1 1 2 3 3 3 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|121638875|ref|YP_979099.1| - 0.00061 18.8 9.0 0.2 10.5 7.0 2.4 2 1 0 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 gi|121638875|ref|YP_979099.1| - 0.012 14.9 26.1 0.085 12.1 26.1 2.2 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 gi|121638875|ref|YP_979099.1| - 0.2 10.5 17.7 0.051 12.4 10.2 2.2 1 1 1 2 2 2 0 Sugar (and other) transporter Iso_dh PF00180.20 gi|121638876|ref|YP_979100.1| - 1e-85 288.0 0.0 1.2e-85 287.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase IFRD PF05004.13 gi|121638876|ref|YP_979100.1| - 0.16 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) 2-Hacid_dh_C PF02826.19 gi|121638877|ref|YP_979101.1| - 1.1e-61 207.3 0.0 2e-61 206.4 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|121638877|ref|YP_979101.1| - 8.9e-38 129.0 0.5 1.5e-37 128.3 0.5 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|121638877|ref|YP_979101.1| - 8e-09 35.1 0.2 2.6e-08 33.5 0.2 2.0 1 0 0 1 1 1 1 ACT domain NAD_binding_2 PF03446.15 gi|121638877|ref|YP_979101.1| - 2.7e-06 27.6 0.1 1.5e-05 25.2 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|121638877|ref|YP_979101.1| - 0.0035 17.4 0.0 0.0082 16.2 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 gi|121638877|ref|YP_979101.1| - 0.0071 15.9 0.0 0.016 14.8 0.0 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 gi|121638877|ref|YP_979101.1| - 0.015 15.2 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121638877|ref|YP_979101.1| - 0.078 13.4 0.0 0.49 10.9 0.0 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding ACT_4 PF13291.6 gi|121638877|ref|YP_979101.1| - 0.08 13.5 0.0 0.26 11.9 0.0 1.8 1 0 0 1 1 1 0 ACT domain GFO_IDH_MocA PF01408.22 gi|121638877|ref|YP_979101.1| - 0.11 13.3 0.0 0.65 10.8 0.0 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold UDPG_MGDP_dh_C PF03720.15 gi|121638877|ref|YP_979101.1| - 0.14 12.6 0.0 0.38 11.2 0.0 1.8 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|121638877|ref|YP_979101.1| - 0.17 12.5 0.1 0.17 12.5 0.1 2.4 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 gi|121638878|ref|YP_979102.1| - 3.9e-08 33.4 3.3 1.9e-07 31.2 0.1 3.2 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|121638878|ref|YP_979102.1| - 2e-06 27.2 0.2 3.4e-06 26.5 0.2 1.3 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|121638878|ref|YP_979102.1| - 4.3e-06 26.3 1.4 6.7e-06 25.7 1.4 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|121638878|ref|YP_979102.1| - 4.1e-05 23.3 1.2 9.3e-05 22.2 0.4 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121638878|ref|YP_979102.1| - 0.00025 20.4 1.0 0.00042 19.7 1.0 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 gi|121638878|ref|YP_979102.1| - 0.00068 18.8 3.4 0.00068 18.8 3.4 2.1 2 1 1 3 3 3 1 FAD binding domain HI0933_like PF03486.14 gi|121638878|ref|YP_979102.1| - 0.0063 15.3 1.2 0.011 14.5 1.2 1.3 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|121638878|ref|YP_979102.1| - 0.0096 15.2 0.3 0.018 14.3 0.3 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|121638878|ref|YP_979102.1| - 0.021 14.7 0.3 0.036 14.0 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|121638878|ref|YP_979102.1| - 0.032 13.5 0.2 0.047 12.9 0.2 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|121638878|ref|YP_979102.1| - 0.054 12.8 1.2 0.47 9.7 0.1 2.3 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|121638878|ref|YP_979102.1| - 0.089 11.8 0.2 0.14 11.2 0.2 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|121638878|ref|YP_979102.1| - 0.22 12.1 0.3 0.46 11.1 0.3 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121638878|ref|YP_979102.1| - 0.41 9.7 2.1 0.56 9.2 2.1 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A HisKA PF00512.25 gi|121638880|ref|YP_979104.1| - 5.7e-05 23.1 0.1 0.0023 17.9 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121638880|ref|YP_979104.1| - 0.00029 21.1 0.2 0.00038 20.8 0.2 1.3 1 0 0 1 1 1 1 HAMP domain G-gamma PF00631.22 gi|121638880|ref|YP_979104.1| - 0.046 13.7 0.0 0.068 13.2 0.0 1.3 1 0 0 1 1 1 0 GGL domain DUF1529 PF07485.11 gi|121638881|ref|YP_979105.1| - 1.4e-84 280.0 0.0 2.2e-41 140.6 0.0 2.1 2 0 0 2 2 2 2 Domain of Unknown Function (DUF1259) DUF3701 PF12482.8 gi|121638881|ref|YP_979105.1| - 0.059 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Phage integrase protein UPF0014 PF03649.13 gi|121638882|ref|YP_979106.1| - 1.9e-31 109.3 0.8 2.5e-31 108.9 0.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) ABC_tran PF00005.27 gi|121638882|ref|YP_979106.1| - 7.9e-14 52.3 0.0 9.8e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|121638882|ref|YP_979106.1| - 3.7e-05 24.2 0.2 5e-05 23.7 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|121638882|ref|YP_979106.1| - 0.0056 16.4 0.1 0.011 15.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|121638882|ref|YP_979106.1| - 0.011 15.9 0.0 0.03 14.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|121638882|ref|YP_979106.1| - 0.016 15.0 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|121638882|ref|YP_979106.1| - 0.017 15.1 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 gi|121638882|ref|YP_979106.1| - 0.033 13.8 0.1 0.056 13.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|121638882|ref|YP_979106.1| - 0.063 13.8 0.0 0.1 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 gi|121638882|ref|YP_979106.1| - 0.07 12.9 0.0 0.098 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|121638882|ref|YP_979106.1| - 0.079 12.9 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase IlvN PF07991.12 gi|121638883|ref|YP_979107.1| - 2.9e-69 231.9 0.1 4e-69 231.4 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|121638883|ref|YP_979107.1| - 3.1e-60 202.6 0.1 4e-60 202.3 0.1 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|121638883|ref|YP_979107.1| - 1.6e-06 27.6 0.0 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|121638883|ref|YP_979107.1| - 1.9e-05 24.9 0.0 6.4e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|121638883|ref|YP_979107.1| - 0.0002 21.9 0.0 0.00055 20.5 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|121638883|ref|YP_979107.1| - 0.066 13.3 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALS_ss_C PF10369.9 gi|121638884|ref|YP_979108.1| - 3e-27 94.6 0.7 1.5e-26 92.4 0.1 2.0 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|121638884|ref|YP_979108.1| - 5.9e-19 67.7 0.2 1.9e-18 66.0 0.0 1.9 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 gi|121638884|ref|YP_979108.1| - 8.7e-19 67.0 0.4 2.3e-18 65.6 0.1 1.9 1 1 1 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|121638884|ref|YP_979108.1| - 1.7e-05 25.3 1.0 4.6e-05 23.9 0.2 2.0 2 1 1 3 3 3 1 ACT domain ACT_6 PF13740.6 gi|121638884|ref|YP_979108.1| - 0.0036 17.3 0.5 0.057 13.4 0.1 2.7 3 0 0 3 3 3 1 ACT domain Saccharop_dh_N PF04455.12 gi|121638884|ref|YP_979108.1| - 0.0056 17.0 0.2 0.047 14.1 0.2 2.1 1 1 1 2 2 2 1 LOR/SDH bifunctional enzyme conserved region THOC7 PF05615.13 gi|121638884|ref|YP_979108.1| - 0.0068 16.7 0.1 0.0086 16.4 0.1 1.2 1 0 0 1 1 1 1 Tho complex subunit 7 PPR_long PF17177.4 gi|121638884|ref|YP_979108.1| - 0.036 13.4 0.1 0.066 12.6 0.1 1.5 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP TPP_enzyme_N PF02776.18 gi|121638885|ref|YP_979109.1| - 3.2e-56 189.6 0.2 8.2e-56 188.3 0.2 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|121638885|ref|YP_979109.1| - 8.3e-53 177.8 0.3 1.6e-52 176.9 0.3 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|121638885|ref|YP_979109.1| - 1.7e-48 164.3 0.0 1.7e-48 164.3 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 gi|121638885|ref|YP_979109.1| - 0.0068 16.2 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit bPH_6 PF10756.9 gi|121638886|ref|YP_979110.1| - 2.1e-19 69.3 4.8 2.8e-19 69.0 4.8 1.2 1 0 0 1 1 1 1 Bacterial PH domain DoxX PF07681.12 gi|121638887|ref|YP_979111.1| - 1.8e-19 70.1 8.9 1.8e-19 70.1 8.9 1.8 3 0 0 3 3 3 1 DoxX DoxD PF04173.13 gi|121638887|ref|YP_979111.1| - 9.6e-05 22.3 0.8 0.00026 20.9 0.8 1.7 1 1 0 1 1 1 1 TQO small subunit DoxD GSDH PF07995.11 gi|121638888|ref|YP_979112.1| - 8.6e-16 58.1 0.0 3.7e-15 56.1 0.0 1.8 1 1 1 2 2 2 1 Glucose / Sorbosone dehydrogenase NHL PF01436.21 gi|121638888|ref|YP_979112.1| - 0.1 12.7 0.1 0.93 9.7 0.0 2.6 2 0 0 2 2 2 0 NHL repeat Mito_fiss_reg PF05308.11 gi|121638888|ref|YP_979112.1| - 0.34 10.9 1.9 0.51 10.4 1.9 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator Flavin_Reduct PF01613.18 gi|121638889|ref|YP_979113.1| - 9.3e-24 84.2 0.1 1.2e-23 83.9 0.1 1.1 1 0 0 1 1 1 1 Flavin reductase like domain GatB_N PF02934.15 gi|121638891|ref|YP_979115.1| - 1.4e-104 349.4 0.0 1.8e-104 349.0 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|121638891|ref|YP_979115.1| - 3.2e-36 124.4 0.1 4.5e-36 124.0 0.1 1.2 1 0 0 1 1 1 1 GatB domain SLX9 PF15341.6 gi|121638891|ref|YP_979115.1| - 0.15 12.4 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Ribosome biogenesis protein SLX9 PFK PF00365.20 gi|121638892|ref|YP_979116.1| - 3.1e-103 345.0 0.1 3.5e-103 344.8 0.1 1.0 1 0 0 1 1 1 1 Phosphofructokinase NAD_kinase PF01513.21 gi|121638892|ref|YP_979116.1| - 5.9e-05 22.4 0.1 9.3e-05 21.8 0.1 1.3 1 0 0 1 1 1 1 ATP-NAD kinase AIRC PF00731.20 gi|121638892|ref|YP_979116.1| - 0.032 13.8 0.0 0.063 12.9 0.0 1.5 1 1 0 1 1 1 0 AIR carboxylase Amidase PF01425.21 gi|121638893|ref|YP_979117.1| - 3.2e-160 534.0 0.4 3.6e-160 533.8 0.4 1.0 1 0 0 1 1 1 1 Amidase Glu-tRNAGln PF02686.15 gi|121638894|ref|YP_979118.1| - 1.4e-16 60.5 0.1 1.9e-16 60.1 0.1 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit ACT PF01842.25 gi|121638895|ref|YP_979119.1| - 0.00038 20.2 0.0 0.00066 19.4 0.0 1.4 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|121638895|ref|YP_979119.1| - 0.056 14.0 0.0 0.12 13.0 0.0 1.5 2 0 0 2 2 2 0 ACT domain DNA_ligase_aden PF01653.18 gi|121638896|ref|YP_979120.1| - 6.6e-126 419.7 0.0 8.4e-126 419.4 0.0 1.1 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 gi|121638896|ref|YP_979120.1| - 1.2e-31 108.5 1.0 2.3e-31 107.5 1.0 1.5 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 gi|121638896|ref|YP_979120.1| - 1.1e-22 79.8 0.1 2.4e-22 78.8 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif BRCT PF00533.26 gi|121638896|ref|YP_979120.1| - 1.2e-13 51.2 0.0 1.9e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HHH_5 PF14520.6 gi|121638896|ref|YP_979120.1| - 1.8e-08 34.9 0.1 4.9e-08 33.5 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain PTCB-BRCT PF12738.7 gi|121638896|ref|YP_979120.1| - 4e-08 33.1 0.0 1.1e-07 31.7 0.0 1.7 1 0 0 1 1 1 1 twin BRCT domain DNA_ligase_ZBD PF03119.16 gi|121638896|ref|YP_979120.1| - 9.1e-08 32.0 5.2 9.1e-08 32.0 5.2 1.9 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain HHH PF00633.23 gi|121638896|ref|YP_979120.1| - 6e-06 25.9 0.1 2e-05 24.2 0.1 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif Auto_anti-p27 PF06677.12 gi|121638896|ref|YP_979120.1| - 0.027 14.6 0.5 0.055 13.6 0.5 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Bactofilin PF04519.13 gi|121638896|ref|YP_979120.1| - 0.33 11.3 2.1 3.6 7.9 0.1 2.5 2 0 0 2 2 2 0 Polymer-forming cytoskeletal Meth_synt_2 PF01717.18 gi|121638897|ref|YP_979121.1| - 4.1e-89 299.1 0.1 4.6e-89 298.9 0.1 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain PEP-utilizers PF00391.23 gi|121638897|ref|YP_979121.1| - 0.041 13.6 0.6 0.19 11.5 0.1 2.4 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain PknH_C PF14032.6 gi|121638898|ref|YP_979122.1| - 9.4e-13 48.4 0.5 4.6e-12 46.2 0.5 1.9 1 1 0 1 1 1 1 PknH-like extracellular domain WXG100 PF06013.12 gi|121638899|ref|YP_979123.1| - 0.00016 21.8 0.4 0.0002 21.6 0.4 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG PPE PF00823.19 gi|121638900|ref|YP_979124.1| - 4.7e-58 195.8 22.3 4.7e-58 195.8 22.3 2.0 2 0 0 2 2 2 1 PPE family WXG100 PF06013.12 gi|121638900|ref|YP_979124.1| - 0.089 13.0 1.8 0.17 12.2 1.8 1.5 1 0 0 1 1 1 0 Proteins of 100 residues with WXG WXG100 PF06013.12 gi|121638902|ref|YP_979126.1| - 3.7e-17 62.3 4.1 4.2e-17 62.1 4.1 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG Xpo1 PF08389.12 gi|121638902|ref|YP_979126.1| - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Exportin 1-like protein WXG100 PF06013.12 gi|121638903|ref|YP_979127.1| - 3.9e-07 30.2 5.5 4.6e-07 30.0 5.5 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 gi|121638903|ref|YP_979127.1| - 0.014 15.9 11.9 0.016 15.7 11.9 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm EIIA-man PF03610.16 gi|121638903|ref|YP_979127.1| - 0.076 13.2 1.2 0.093 13.0 1.2 1.1 1 0 0 1 1 1 0 PTS system fructose IIA component PPE PF00823.19 gi|121638904|ref|YP_979128.1| - 4.6e-58 195.8 22.3 4.6e-58 195.8 22.3 2.1 3 0 0 3 3 3 1 PPE family WXG100 PF06013.12 gi|121638904|ref|YP_979128.1| - 0.21 11.8 4.1 0.16 12.2 1.8 2.0 2 0 0 2 2 2 0 Proteins of 100 residues with WXG PE PF00934.20 gi|121638905|ref|YP_979129.1| - 9.7e-20 70.7 11.9 1.2e-19 70.4 11.9 1.1 1 0 0 1 1 1 1 PE family Transposase_mut PF00872.18 gi|121638906|ref|YP_979130.1| - 1.4e-154 514.6 0.0 1.6e-154 514.4 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121638906|ref|YP_979130.1| - 2e-05 24.9 0.0 5.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain tRNA_Me_trans PF03054.16 gi|121638907|ref|YP_979131.1| - 1.8e-118 395.4 0.0 2.1e-118 395.2 0.0 1.0 1 0 0 1 1 1 1 tRNA methyl transferase ThiI PF02568.14 gi|121638907|ref|YP_979131.1| - 8.4e-05 22.2 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|121638907|ref|YP_979131.1| - 0.0019 17.9 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.17 gi|121638907|ref|YP_979131.1| - 0.015 14.4 0.0 0.029 13.5 0.0 1.5 1 1 0 1 1 1 0 NAD synthase Smoa_sbd PF17885.1 gi|121638907|ref|YP_979131.1| - 0.029 14.5 0.0 0.068 13.3 0.0 1.5 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain QueC PF06508.13 gi|121638907|ref|YP_979131.1| - 0.11 12.0 0.5 0.31 10.5 0.3 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Aminotran_5 PF00266.19 gi|121638908|ref|YP_979132.1| - 2.1e-62 211.3 0.0 2.5e-62 211.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|121638908|ref|YP_979132.1| - 5.2e-07 29.2 0.2 8.2e-07 28.6 0.2 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|121638908|ref|YP_979132.1| - 0.09 11.4 0.0 0.14 10.8 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-III Acyltransferase PF01553.21 gi|121638909|ref|YP_979133.1| - 9.9e-21 73.8 0.0 1.3e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase Acetyltransf_5 PF13444.6 gi|121638910|ref|YP_979134.1| - 2.9e-28 98.6 0.0 4.4e-28 98.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Autoind_synth PF00765.17 gi|121638910|ref|YP_979134.1| - 0.14 11.7 0.0 0.4 10.2 0.0 1.7 1 1 0 1 1 1 0 Autoinducer synthase ETF_alpha PF00766.19 gi|121638911|ref|YP_979135.1| - 1e-35 121.6 1.9 2.6e-35 120.3 1.9 1.8 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|121638911|ref|YP_979135.1| - 9.7e-29 100.5 14.7 2.2e-28 99.4 14.7 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF PF01012.21 gi|121638912|ref|YP_979136.1| - 5.8e-41 140.4 3.0 7.3e-41 140.0 3.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Methyltransf_11 PF08241.12 gi|121638913|ref|YP_979137.1| - 2.4e-21 76.2 0.1 4.1e-21 75.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121638913|ref|YP_979137.1| - 3.6e-18 66.1 0.2 8.5e-18 64.9 0.1 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638913|ref|YP_979137.1| - 4.6e-13 49.2 0.0 6.2e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121638913|ref|YP_979137.1| - 1.5e-12 47.6 0.0 2.7e-12 46.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638913|ref|YP_979137.1| - 5.4e-08 33.5 0.0 9.3e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|121638913|ref|YP_979137.1| - 1.7e-05 24.8 0.0 2.9e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Ubie_methyltran PF01209.18 gi|121638913|ref|YP_979137.1| - 0.00047 19.6 0.0 0.0016 17.9 0.0 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Pox_MCEL PF03291.16 gi|121638913|ref|YP_979137.1| - 0.0089 15.2 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme NodS PF05401.11 gi|121638913|ref|YP_979137.1| - 0.01 15.5 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) MetW PF07021.12 gi|121638913|ref|YP_979137.1| - 0.025 14.2 0.1 0.054 13.1 0.0 1.5 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 gi|121638913|ref|YP_979137.1| - 0.029 14.4 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|121638913|ref|YP_979137.1| - 0.045 13.3 0.0 0.084 12.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 gi|121638913|ref|YP_979137.1| - 0.14 11.5 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|121638913|ref|YP_979137.1| - 0.25 10.4 0.0 0.34 9.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DUF1957 PF09210.11 gi|121638914|ref|YP_979138.1| - 1.6e-19 70.1 0.1 3.6e-19 69.0 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1957) Glyco_hydro_57 PF03065.15 gi|121638914|ref|YP_979138.1| - 9.5e-16 57.9 0.0 4.2e-15 55.8 0.0 2.1 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 EcoEI_R_C PF08463.10 gi|121638914|ref|YP_979138.1| - 0.2 11.7 0.0 0.49 10.5 0.0 1.5 2 0 0 2 2 2 0 EcoEI R protein C-terminal Glycos_transf_1 PF00534.20 gi|121638915|ref|YP_979139.1| - 3.5e-43 147.1 0.0 5.1e-43 146.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|121638915|ref|YP_979139.1| - 2.5e-31 109.0 6.1 3.6e-30 105.2 1.2 2.5 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|121638915|ref|YP_979139.1| - 1.1e-27 97.1 0.0 2.3e-27 96.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|121638915|ref|YP_979139.1| - 1e-26 94.2 0.9 5.5e-26 91.8 0.9 2.1 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.6 gi|121638915|ref|YP_979139.1| - 1.2e-26 94.0 5.0 1.2e-26 94.0 5.0 2.4 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|121638915|ref|YP_979139.1| - 6e-13 49.0 0.0 1.4e-12 47.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycogen_syn PF05693.13 gi|121638915|ref|YP_979139.1| - 0.00059 18.5 0.0 0.0077 14.8 0.0 2.0 2 0 0 2 2 2 1 Glycogen synthase Glyco_trans_4_2 PF13477.6 gi|121638915|ref|YP_979139.1| - 0.0008 19.5 0.1 0.0019 18.2 0.1 1.6 1 1 0 1 1 1 1 Glycosyl transferase 4-like DUF4333 PF14230.6 gi|121638917|ref|YP_979141.1| - 1.1e-36 124.9 5.0 2.8e-22 78.8 0.4 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4333) Rtt106 PF08512.12 gi|121638917|ref|YP_979141.1| - 0.13 12.6 0.1 0.29 11.6 0.1 1.5 1 0 0 1 1 1 0 Histone chaperone Rttp106-like Hexapep PF00132.24 gi|121638918|ref|YP_979142.1| - 1.3e-09 37.4 9.1 2.1e-07 30.4 1.3 3.9 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|121638918|ref|YP_979142.1| - 0.0002 21.0 0.3 0.0002 21.0 0.3 3.2 4 1 0 4 4 4 1 Hexapeptide repeat of succinyl-transferase PQQ_2 PF13360.6 gi|121638919|ref|YP_979143.1| - 1.3e-11 44.5 7.8 9.8e-07 28.6 2.2 2.5 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 gi|121638919|ref|YP_979143.1| - 2.1e-08 34.4 23.1 0.014 15.9 0.6 6.6 7 0 0 7 7 7 4 PQQ-like domain PQQ PF01011.21 gi|121638919|ref|YP_979143.1| - 6.8e-05 22.6 1.2 0.00083 19.2 0.0 3.2 4 0 0 4 4 4 1 PQQ enzyme repeat DUF3298 PF11738.8 gi|121638920|ref|YP_979144.1| - 6.7e-13 49.5 0.0 1.5e-12 48.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3298) Thump_like PF18096.1 gi|121638921|ref|YP_979145.1| - 2.5e-20 72.2 0.1 4.8e-20 71.3 0.1 1.5 1 0 0 1 1 1 1 THUMP domain-like Methyltransf_25 PF13649.6 gi|121638921|ref|YP_979145.1| - 0.012 16.3 0.1 0.024 15.3 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121638922|ref|YP_979146.1| - 1.5e-23 83.2 0.2 7e-23 81.1 0.1 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121638922|ref|YP_979146.1| - 3.3e-20 72.6 0.5 1.3e-19 70.7 0.1 2.2 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121638922|ref|YP_979146.1| - 9.5e-17 61.2 0.0 4.2e-16 59.1 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121638922|ref|YP_979146.1| - 3.4e-14 53.4 0.2 4.5e-13 49.8 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121638922|ref|YP_979146.1| - 5.9e-12 45.4 0.0 9e-12 44.8 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|121638922|ref|YP_979146.1| - 7.7e-12 45.4 0.0 3e-11 43.5 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain NodS PF05401.11 gi|121638922|ref|YP_979146.1| - 3e-06 27.0 0.0 4.7e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 gi|121638922|ref|YP_979146.1| - 0.00079 19.1 0.0 0.0013 18.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|121638922|ref|YP_979146.1| - 0.0082 16.0 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 gi|121638922|ref|YP_979146.1| - 0.012 15.2 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_29 PF03141.16 gi|121638922|ref|YP_979146.1| - 0.012 14.2 0.0 0.016 13.8 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase PrmA PF06325.13 gi|121638922|ref|YP_979146.1| - 0.081 12.3 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ECH_1 PF00378.20 gi|121638923|ref|YP_979147.1| - 9.4e-46 156.2 0.1 1.1e-45 155.9 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121638923|ref|YP_979147.1| - 9.3e-20 71.4 0.1 1e-19 71.2 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|121638923|ref|YP_979147.1| - 0.076 13.0 0.3 1.3 9.0 0.0 2.3 2 0 0 2 2 2 0 Peptidase family S49 DLH PF01738.18 gi|121638923|ref|YP_979147.1| - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family NUDIX PF00293.28 gi|121638924|ref|YP_979148.1| - 6.1e-06 26.3 0.4 0.0011 19.1 0.4 3.0 1 1 0 1 1 1 1 NUDIX domain ABC_tran PF00005.27 gi|121638925|ref|YP_979149.1| - 2.7e-23 83.0 0.0 3.5e-23 82.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121638925|ref|YP_979149.1| - 1.4e-09 38.2 0.6 0.0008 19.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|121638925|ref|YP_979149.1| - 0.0014 19.0 0.7 0.0047 17.3 0.7 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|121638925|ref|YP_979149.1| - 0.0071 16.9 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|121638925|ref|YP_979149.1| - 0.0098 15.4 0.0 0.21 11.0 0.1 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|121638925|ref|YP_979149.1| - 0.023 15.0 0.1 0.26 11.6 0.1 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121638925|ref|YP_979149.1| - 0.024 14.4 0.0 0.72 9.6 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF3584 PF12128.8 gi|121638925|ref|YP_979149.1| - 0.038 11.5 0.0 0.052 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_15 PF13175.6 gi|121638925|ref|YP_979149.1| - 0.055 13.2 0.0 0.092 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|121638925|ref|YP_979149.1| - 0.058 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|121638925|ref|YP_979149.1| - 0.062 13.0 0.2 0.095 12.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|121638925|ref|YP_979149.1| - 0.069 13.6 0.0 0.2 12.1 0.0 1.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|121638925|ref|YP_979149.1| - 0.071 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain HAD PF12710.7 gi|121638926|ref|YP_979150.1| - 4.8e-29 102.1 0.1 8.9e-29 101.2 0.1 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ACT_6 PF13740.6 gi|121638926|ref|YP_979150.1| - 5.9e-21 74.2 0.6 7.3e-19 67.5 1.0 3.1 3 0 0 3 3 3 1 ACT domain Hydrolase PF00702.26 gi|121638926|ref|YP_979150.1| - 3.9e-20 73.1 0.3 5.6e-20 72.5 0.3 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121638926|ref|YP_979150.1| - 4.5e-12 46.2 0.0 1.7e-11 44.3 0.0 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase ACT PF01842.25 gi|121638926|ref|YP_979150.1| - 8.5e-11 41.4 1.1 7.4e-05 22.4 0.2 2.7 2 0 0 2 2 2 2 ACT domain S6PP PF05116.13 gi|121638926|ref|YP_979150.1| - 1.2e-05 25.0 0.0 0.00024 20.7 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 gi|121638926|ref|YP_979150.1| - 2.4e-05 24.5 0.0 0.00028 21.0 0.0 2.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase ACT_7 PF13840.6 gi|121638926|ref|YP_979150.1| - 0.0016 18.2 0.0 0.008 16.0 0.1 2.1 2 0 0 2 2 2 1 ACT domain Put_Phosphatase PF06888.12 gi|121638926|ref|YP_979150.1| - 0.0033 16.8 0.0 0.11 11.8 0.0 2.1 2 0 0 2 2 2 1 Putative Phosphatase Toxin_ToxA PF11584.8 gi|121638926|ref|YP_979150.1| - 0.12 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Proteinaceous host-selective toxin ToxA DUF705 PF05152.12 gi|121638926|ref|YP_979150.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Acid_PPase PF12689.7 gi|121638926|ref|YP_979150.1| - 0.23 11.3 0.0 0.45 10.3 0.0 1.6 1 1 0 1 1 1 0 Acid Phosphatase COX1 PF00115.20 gi|121638927|ref|YP_979151.1| - 2e-151 504.8 66.0 2.3e-151 504.5 66.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I p53-inducible11 PF14936.6 gi|121638927|ref|YP_979151.1| - 0.32 11.0 6.7 2.9 7.9 0.4 2.9 3 0 0 3 3 3 0 Tumour protein p53-inducible protein 11 Peripla_BP_2 PF01497.18 gi|121638928|ref|YP_979152.1| - 2.5e-17 63.2 0.1 3.8e-17 62.6 0.1 1.3 1 0 0 1 1 1 1 Periplasmic binding protein ADH_N PF08240.12 gi|121638929|ref|YP_979153.1| - 4.4e-29 100.6 2.4 8e-29 99.7 2.4 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121638929|ref|YP_979153.1| - 2.3e-16 60.0 0.1 4.7e-16 59.0 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121638929|ref|YP_979153.1| - 0.0005 21.1 0.0 0.0008 20.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|121638929|ref|YP_979153.1| - 0.006 15.9 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|121638929|ref|YP_979153.1| - 0.022 14.1 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|121638929|ref|YP_979153.1| - 0.14 12.6 0.0 0.26 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|121638929|ref|YP_979153.1| - 0.18 11.7 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF3349 PF11829.8 gi|121638930|ref|YP_979154.1| - 6.6e-29 100.5 0.0 7.7e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3349) Glycos_trans_3N PF02885.17 gi|121638930|ref|YP_979154.1| - 0.056 13.3 0.1 2.4 8.1 0.1 2.1 1 1 0 1 1 1 0 Glycosyl transferase family, helical bundle domain Ribonuc_red_sm PF00268.21 gi|121638932|ref|YP_979156.1| - 1.4e-90 303.6 0.0 1.6e-90 303.4 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Pyr_redox_3 PF13738.6 gi|121638933|ref|YP_979157.1| - 5.6e-17 62.0 0.0 9e-15 54.7 0.0 2.9 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 gi|121638933|ref|YP_979157.1| - 1.2e-16 60.3 0.0 2.4e-15 56.0 0.0 2.2 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 gi|121638933|ref|YP_979157.1| - 3e-13 49.8 1.6 7.3e-13 48.6 0.0 2.5 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 gi|121638933|ref|YP_979157.1| - 9.6e-10 38.1 0.0 4.2e-06 26.1 0.0 3.0 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 gi|121638933|ref|YP_979157.1| - 8.9e-06 25.1 0.0 0.00018 20.8 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121638933|ref|YP_979157.1| - 7.5e-05 22.5 0.3 0.00063 19.4 0.0 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121638933|ref|YP_979157.1| - 0.00047 19.3 0.0 0.00081 18.6 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|121638933|ref|YP_979157.1| - 0.0025 17.1 0.1 0.0045 16.3 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 gi|121638933|ref|YP_979157.1| - 0.0025 17.8 0.1 0.059 13.4 0.0 2.5 3 0 0 3 3 3 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|121638933|ref|YP_979157.1| - 0.0044 17.5 0.7 0.021 15.4 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|121638933|ref|YP_979157.1| - 0.019 14.3 0.0 0.048 12.9 0.0 1.6 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Thi4 PF01946.17 gi|121638933|ref|YP_979157.1| - 0.044 13.0 0.3 0.1 11.8 0.1 1.7 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 gi|121638933|ref|YP_979157.1| - 0.14 10.9 0.5 0.22 10.2 0.5 1.3 1 0 0 1 1 1 0 HI0933-like protein TetR_N PF00440.23 gi|121638934|ref|YP_979158.1| - 1.8e-12 46.9 0.0 3.8e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 gi|121638934|ref|YP_979158.1| - 3.4e-05 24.6 4.6 4.5e-05 24.1 1.4 2.2 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|121638934|ref|YP_979158.1| - 3.7e-05 24.0 0.4 6.8e-05 23.1 0.4 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_IclR PF09339.10 gi|121638934|ref|YP_979158.1| - 0.0081 15.9 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain LysR_substrate PF03466.20 gi|121638934|ref|YP_979158.1| - 0.016 14.6 0.2 0.055 12.8 0.0 1.8 2 0 0 2 2 2 0 LysR substrate binding domain Ribosomal_S3Ae PF01015.18 gi|121638934|ref|YP_979158.1| - 0.018 14.6 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal S3Ae family HTH_5 PF01022.20 gi|121638934|ref|YP_979158.1| - 0.12 12.3 0.0 0.27 11.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Ribonuc_red_lgC PF02867.15 gi|121638935|ref|YP_979159.1| - 4.7e-145 484.1 0.2 2.4e-143 478.5 0.2 2.1 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain RNR_N PF08343.10 gi|121638935|ref|YP_979159.1| - 5.4e-28 96.9 9.4 7.3e-28 96.4 7.6 2.2 2 0 0 2 2 2 1 Ribonucleotide reductase N-terminal Ribonuc_red_lgN PF00317.21 gi|121638935|ref|YP_979159.1| - 6.4e-12 45.3 0.1 4.6e-11 42.6 0.0 2.5 2 0 0 2 2 2 1 Ribonucleotide reductase, all-alpha domain Fib_succ_major PF09603.10 gi|121638935|ref|YP_979159.1| - 0.13 12.9 0.0 0.22 12.1 0.0 1.4 1 0 0 1 1 1 0 Fibrobacter succinogenes major domain (Fib_succ_major) T4bSS_IcmS PF12608.8 gi|121638935|ref|YP_979159.1| - 0.17 12.2 0.2 0.4 11.0 0.2 1.5 1 0 0 1 1 1 0 Type IVb secretion, IcmS, effector-recruitment Flavodoxin_NdrI PF07972.11 gi|121638936|ref|YP_979160.1| - 4.9e-46 155.8 0.0 5.7e-46 155.6 0.0 1.1 1 0 0 1 1 1 1 NrdI Flavodoxin like Glutaredoxin PF00462.24 gi|121638937|ref|YP_979161.1| - 2.7e-15 56.3 0.0 3.1e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|121638937|ref|YP_979161.1| - 0.0087 16.4 0.0 0.009 16.4 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) SH3BGR PF04908.15 gi|121638937|ref|YP_979161.1| - 0.045 13.9 0.0 0.05 13.8 0.0 1.1 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein FMN_red PF03358.15 gi|121638939|ref|YP_979163.1| - 7.8e-34 116.7 0.0 9.6e-34 116.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|121638939|ref|YP_979163.1| - 5.5e-06 26.2 0.0 6.9e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold TetR_N PF00440.23 gi|121638940|ref|YP_979164.1| - 1.5e-14 53.5 0.4 2.5e-14 52.8 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Ribosomal_L18 PF17135.4 gi|121638940|ref|YP_979164.1| - 0.036 13.5 0.2 0.059 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e LacI PF00356.21 gi|121638940|ref|YP_979164.1| - 0.12 12.2 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_18 PF12833.7 gi|121638940|ref|YP_979164.1| - 0.18 12.1 4.5 0.26 11.6 0.4 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain IMS PF00817.20 gi|121638941|ref|YP_979165.1| - 1.4e-39 135.5 0.0 3e-39 134.4 0.0 1.5 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.8 gi|121638941|ref|YP_979165.1| - 2.5e-08 34.6 0.7 4.7e-08 33.8 0.7 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|121638941|ref|YP_979165.1| - 2.6e-05 24.3 0.0 6.7e-05 23.0 0.0 1.8 1 0 0 1 1 1 1 IMS family HHH motif BAF PF02961.14 gi|121638941|ref|YP_979165.1| - 0.004 17.6 0.0 0.0078 16.6 0.0 1.4 1 0 0 1 1 1 1 Barrier to autointegration factor HHH_5 PF14520.6 gi|121638941|ref|YP_979165.1| - 0.0044 17.6 0.0 0.0096 16.5 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain HTH_Tnp_IS1 PF12759.7 gi|121638941|ref|YP_979165.1| - 0.015 14.9 1.0 0.079 12.6 0.0 2.5 3 0 0 3 3 3 0 InsA C-terminal domain DNA_pol_lambd_f PF10391.9 gi|121638941|ref|YP_979165.1| - 0.017 15.0 0.0 0.052 13.4 0.0 1.9 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|121638941|ref|YP_979165.1| - 0.058 13.6 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus Dus PF01207.17 gi|121638941|ref|YP_979165.1| - 0.12 11.5 0.2 0.33 10.0 0.2 1.7 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) adh_short PF00106.25 gi|121638942|ref|YP_979166.1| - 6.5e-49 166.0 0.0 8.3e-49 165.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638942|ref|YP_979166.1| - 2.3e-39 135.3 0.2 2.8e-39 135.0 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121638942|ref|YP_979166.1| - 2e-16 60.4 0.2 3e-16 59.8 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121638942|ref|YP_979166.1| - 0.0003 20.4 0.1 0.00045 19.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 gi|121638942|ref|YP_979166.1| - 0.18 11.1 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) TetR_N PF00440.23 gi|121638943|ref|YP_979167.1| - 1.7e-12 46.9 0.6 3.9e-12 45.8 0.6 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_9 PF14514.6 gi|121638943|ref|YP_979167.1| - 0.018 15.2 0.1 0.087 13.0 0.0 2.1 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain p450 PF00067.22 gi|121638944|ref|YP_979168.1| - 8.1e-67 225.9 0.0 1e-66 225.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Me-amine-dh_H PF06433.11 gi|121638944|ref|YP_979168.1| - 0.0021 17.0 0.0 0.0032 16.4 0.0 1.2 1 0 0 1 1 1 1 Methylamine dehydrogenase heavy chain (MADH) FCD PF07729.12 gi|121638945|ref|YP_979169.1| - 1.9e-30 105.9 18.9 6.4e-17 62.1 0.7 3.7 4 1 0 4 4 4 2 FCD domain GntR PF00392.21 gi|121638945|ref|YP_979169.1| - 1.4e-15 56.6 1.0 2.3e-07 30.4 0.1 2.6 2 0 0 2 2 2 2 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|121638945|ref|YP_979169.1| - 4.1e-07 30.2 0.0 0.012 15.9 0.0 2.5 2 0 0 2 2 2 2 Transcriptional regulator Acyl-CoA_dh_1 PF00441.24 gi|121638946|ref|YP_979170.1| - 5.4e-41 140.3 17.9 2.6e-22 79.7 7.6 2.4 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121638946|ref|YP_979170.1| - 1.2e-27 96.8 8.2 1.5e-19 70.7 0.0 3.9 4 1 1 5 5 5 2 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121638946|ref|YP_979170.1| - 8.7e-17 61.1 0.0 2.8e-16 59.5 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Patatin PF01734.22 gi|121638946|ref|YP_979170.1| - 0.028 14.6 0.4 0.057 13.6 0.4 1.5 1 0 0 1 1 1 0 Patatin-like phospholipase Nterm_IS4 PF13006.7 gi|121638946|ref|YP_979170.1| - 0.55 10.5 4.5 9.1 6.6 0.0 3.7 3 1 1 4 4 4 0 Insertion element 4 transposase N-terminal DNA_ligase_A_M PF01068.21 gi|121638947|ref|YP_979171.1| - 9.7e-48 162.5 0.0 1.3e-47 162.1 0.0 1.1 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|121638947|ref|YP_979171.1| - 2.5e-11 44.2 0.0 5.2e-09 36.7 0.0 2.9 1 1 2 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|121638947|ref|YP_979171.1| - 4.2e-11 43.3 0.1 1.4e-10 41.7 0.0 2.0 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|121638947|ref|YP_979171.1| - 0.00098 19.5 0.0 0.0015 18.9 0.0 1.3 1 0 0 1 1 1 1 RNA ligase CstA PF02554.14 gi|121638948|ref|YP_979172.1| - 9.3e-156 518.4 20.9 9.3e-156 518.4 20.9 2.4 3 0 0 3 3 3 1 Carbon starvation protein CstA CstA_5TM PF13722.6 gi|121638948|ref|YP_979172.1| - 1.2e-31 109.5 3.0 1.2e-31 109.5 3.0 3.4 4 0 0 4 4 4 1 5TM C-terminal transporter carbon starvation CstA MLTD_N PF06474.12 gi|121638948|ref|YP_979172.1| - 2.7 8.2 4.4 9.7 6.5 0.1 3.1 2 0 0 2 2 2 0 MltD lipid attachment motif DoxX PF07681.12 gi|121638949|ref|YP_979173.1| - 4e-10 40.1 8.0 6.8e-10 39.4 8.0 1.4 1 0 0 1 1 1 1 DoxX DoxD PF04173.13 gi|121638949|ref|YP_979173.1| - 0.012 15.5 2.3 0.049 13.5 2.3 1.8 1 1 0 1 1 1 0 TQO small subunit DoxD Multi_Drug_Res PF00893.19 gi|121638950|ref|YP_979174.1| - 4.1e-29 101.1 10.3 5.3e-29 100.7 10.3 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 gi|121638950|ref|YP_979174.1| - 0.0014 18.8 13.6 0.0017 18.5 13.6 1.2 1 0 0 1 1 1 1 EamA-like transporter family EmrE PF13536.6 gi|121638950|ref|YP_979174.1| - 0.058 13.0 11.3 0.11 12.1 11.3 1.4 1 1 0 1 1 1 0 Putative multidrug resistance efflux transporter TPT PF03151.16 gi|121638950|ref|YP_979174.1| - 0.061 12.7 6.0 0.059 12.7 5.3 1.2 1 1 0 1 1 1 0 Triose-phosphate Transporter family CreD PF06123.12 gi|121638950|ref|YP_979174.1| - 2.4 6.9 5.7 2.4 6.9 5.7 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD TetR_C_31 PF17940.1 gi|121638951|ref|YP_979175.1| - 4.1e-10 39.8 10.7 4.1e-10 39.8 10.7 2.6 2 1 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121638951|ref|YP_979175.1| - 1.3e-08 34.5 0.1 3.2e-08 33.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_28 PF17937.1 gi|121638951|ref|YP_979175.1| - 0.00021 21.7 12.4 0.00045 20.6 4.5 2.3 1 1 1 2 2 2 2 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 gi|121638951|ref|YP_979175.1| - 1 9.6 14.3 0.1 12.8 6.2 3.0 2 1 1 3 3 3 0 BetI-type transcriptional repressor, C-terminal DUF732 PF05305.14 gi|121638952|ref|YP_979176.1| - 7.4e-16 58.3 0.1 1e-15 57.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF732) DUF2759 PF10958.8 gi|121638952|ref|YP_979176.1| - 0.43 10.3 1.9 0.66 9.7 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) PGM_PMM_I PF02878.16 gi|121638953|ref|YP_979177.1| - 4.2e-38 130.2 0.1 7.8e-38 129.3 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|121638953|ref|YP_979177.1| - 1e-27 96.6 0.0 1.8e-27 95.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|121638953|ref|YP_979177.1| - 1.9e-11 44.5 0.0 7.6e-11 42.6 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|121638953|ref|YP_979177.1| - 5.4e-07 29.7 0.0 1.4e-06 28.3 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CRCB PF02537.15 gi|121638954|ref|YP_979178.1| - 1.8e-26 92.3 5.0 2.1e-26 92.0 5.0 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Phage_holin_3_6 PF07332.11 gi|121638954|ref|YP_979178.1| - 0.099 12.7 8.9 1.8 8.6 1.9 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III CRCB PF02537.15 gi|121638955|ref|YP_979179.1| - 1.2e-24 86.4 7.1 1.5e-24 86.1 7.1 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF3180 PF11377.8 gi|121638955|ref|YP_979179.1| - 0.023 14.8 4.3 0.023 14.8 4.3 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3180) DUF4203 PF13886.6 gi|121638955|ref|YP_979179.1| - 0.077 12.7 12.6 0.064 12.9 5.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4203) DUF3493 PF11998.8 gi|121638955|ref|YP_979179.1| - 1.1 9.5 6.8 1.3 9.2 0.6 2.3 2 1 0 2 2 2 0 Low psii accumulation1 / Rep27 DUF4235 PF14019.6 gi|121638955|ref|YP_979179.1| - 9.1 6.4 10.9 5.7 7.1 0.3 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF4235) DUF190 PF02641.15 gi|121638956|ref|YP_979180.1| - 6.2e-61 202.8 0.0 1.1e-20 73.7 0.0 3.1 3 0 0 3 3 3 3 Uncharacterized ACR, COG1993 Bac_luciferase PF00296.20 gi|121638957|ref|YP_979181.1| - 9.2e-18 64.7 0.8 1.2e-17 64.3 0.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF488 PF04343.13 gi|121638958|ref|YP_979182.1| - 2.2e-25 89.6 0.4 2.5e-25 89.4 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF488 DUF222 PF02720.17 gi|121638959|ref|YP_979183.1| - 3.4e-13 49.8 29.4 5.3e-13 49.1 29.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121638959|ref|YP_979183.1| - 0.00055 20.0 0.8 0.001 19.2 0.8 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 gi|121638959|ref|YP_979183.1| - 0.026 14.4 0.3 0.045 13.6 0.3 1.4 1 0 0 1 1 1 0 HNH endonuclease HpcH_HpaI PF03328.14 gi|121638960|ref|YP_979184.1| - 5.6e-29 100.9 0.1 1e-28 100.0 0.1 1.5 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|121638960|ref|YP_979184.1| - 0.0033 16.6 0.0 0.34 10.0 0.0 2.1 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold Polyketide_cyc2 PF10604.9 gi|121638961|ref|YP_979185.1| - 1.8e-23 83.4 0.5 2.1e-23 83.2 0.5 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|121638961|ref|YP_979185.1| - 8e-11 42.3 0.0 1.1e-10 41.8 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Sulfatase PF00884.23 gi|121638962|ref|YP_979186.1| - 7.2e-59 199.7 0.0 8.8e-59 199.4 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF4976 PF16347.5 gi|121638962|ref|YP_979186.1| - 5.3e-05 23.4 3.6 8.3e-05 22.8 0.2 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) MIG-14_Wnt-bd PF06664.12 gi|121638963|ref|YP_979187.1| - 0.035 13.3 1.3 0.043 13.0 1.3 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Bac_luciferase PF00296.20 gi|121638964|ref|YP_979188.1| - 3.1e-37 128.7 0.9 4.1e-37 128.3 0.9 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Pkinase PF00069.25 gi|121638965|ref|YP_979189.1| - 3.2e-42 144.7 0.0 5.6e-42 143.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|121638965|ref|YP_979189.1| - 3.8e-32 111.6 0.0 6e-32 110.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase AAA_16 PF13191.6 gi|121638965|ref|YP_979189.1| - 5.6e-12 46.4 0.7 5.6e-12 46.4 0.7 2.9 3 0 0 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 gi|121638965|ref|YP_979189.1| - 2.1e-06 28.0 0.0 6.5e-06 26.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121638965|ref|YP_979189.1| - 0.002 17.7 1.5 0.13 11.9 0.0 3.4 3 0 0 3 3 3 1 AAA domain ATPase_2 PF01637.18 gi|121638965|ref|YP_979189.1| - 0.02 14.8 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MeaB PF03308.16 gi|121638965|ref|YP_979189.1| - 0.036 13.1 0.0 0.066 12.2 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF5375 PF17345.2 gi|121638965|ref|YP_979189.1| - 0.085 12.8 0.1 0.32 10.9 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5375) AAA_33 PF13671.6 gi|121638965|ref|YP_979189.1| - 0.12 12.5 0.1 2.2 8.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|121638965|ref|YP_979189.1| - 0.16 12.1 0.0 1 9.4 0.0 2.3 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2204 PF09970.9 gi|121638966|ref|YP_979190.1| - 9.6e-05 22.1 0.0 0.00015 21.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) HTH_23 PF13384.6 gi|121638966|ref|YP_979190.1| - 0.0032 17.2 0.2 0.51 10.2 0.1 3.2 2 0 0 2 2 2 2 Homeodomain-like domain Arabinose_bd PF12625.7 gi|121638967|ref|YP_979191.1| - 3.8e-37 128.2 3.3 6.5e-37 127.4 3.3 1.4 1 0 0 1 1 1 1 Arabinose-binding domain of AraC transcription regulator, N-term HTH_18 PF12833.7 gi|121638967|ref|YP_979191.1| - 1.8e-16 60.2 0.8 4.5e-16 58.9 0.4 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121638967|ref|YP_979191.1| - 1.2e-06 28.4 0.0 0.0002 21.4 0.0 2.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 gi|121638967|ref|YP_979191.1| - 1.1e-05 25.0 1.9 0.14 12.0 0.2 3.2 3 0 0 3 3 3 2 Homeodomain-like domain HTH_38 PF13936.6 gi|121638967|ref|YP_979191.1| - 0.015 15.1 0.4 1.2 8.9 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.6 gi|121638967|ref|YP_979191.1| - 0.016 15.0 0.1 0.066 13.0 0.1 2.1 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain HTH_20 PF12840.7 gi|121638967|ref|YP_979191.1| - 0.029 14.4 3.3 0.087 12.9 1.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_8 PF02954.19 gi|121638967|ref|YP_979191.1| - 0.039 13.8 0.9 0.28 11.0 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family HTH_28 PF13518.6 gi|121638967|ref|YP_979191.1| - 0.16 12.2 1.3 1.8 8.8 0.2 3.1 1 1 1 2 2 2 0 Helix-turn-helix domain FMO-like PF00743.19 gi|121638968|ref|YP_979192.1| - 7e-15 54.4 0.0 5.5e-13 48.2 0.0 2.7 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 gi|121638968|ref|YP_979192.1| - 6.4e-10 38.7 0.0 2.7e-07 30.1 0.0 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|121638968|ref|YP_979192.1| - 9.3e-10 38.2 0.0 2.2e-06 27.1 0.0 2.8 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 gi|121638968|ref|YP_979192.1| - 3.5e-08 33.5 0.2 1e-06 28.8 0.0 3.3 4 0 0 4 4 4 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|121638968|ref|YP_979192.1| - 4.1e-08 32.9 0.1 5.6e-07 29.1 0.1 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121638968|ref|YP_979192.1| - 4.7e-07 29.7 2.9 0.0001 22.1 0.1 3.6 3 1 1 4 4 4 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121638968|ref|YP_979192.1| - 5.7e-05 22.5 0.0 0.00085 18.6 0.0 2.4 3 0 0 3 3 3 1 Thi4 family Lycopene_cycl PF05834.12 gi|121638968|ref|YP_979192.1| - 0.0012 18.0 0.5 1.3 8.0 0.0 3.0 3 0 0 3 3 3 2 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|121638968|ref|YP_979192.1| - 0.004 17.2 1.4 0.43 10.6 0.0 3.6 4 0 0 4 4 4 1 FAD-NAD(P)-binding FAD_oxidored PF12831.7 gi|121638968|ref|YP_979192.1| - 0.0085 15.5 0.0 0.018 14.4 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|121638968|ref|YP_979192.1| - 0.015 15.8 0.1 9 6.9 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|121638968|ref|YP_979192.1| - 0.089 12.9 0.0 2.6 8.1 0.0 2.7 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 gi|121638968|ref|YP_979192.1| - 0.17 11.1 1.8 5.6 6.1 0.1 2.3 2 0 0 2 2 2 0 FAD binding domain MCRA PF06100.11 gi|121638968|ref|YP_979192.1| - 0.2 10.4 0.0 0.3 9.8 0.0 1.2 1 0 0 1 1 1 0 MCRA family Abhydrolase_3 PF07859.13 gi|121638969|ref|YP_979193.1| - 4.5e-42 144.3 0.3 5.8e-42 143.9 0.3 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121638969|ref|YP_979193.1| - 6.9e-11 41.6 0.0 9.3e-11 41.2 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Thioesterase PF00975.20 gi|121638969|ref|YP_979193.1| - 2.8e-05 24.3 0.3 3.9e-05 23.9 0.3 1.2 1 0 0 1 1 1 1 Thioesterase domain YjeF_N PF03853.15 gi|121638969|ref|YP_979193.1| - 0.037 13.9 0.2 0.084 12.7 0.0 1.6 2 0 0 2 2 2 0 YjeF-related protein N-terminus Hydrolase_4 PF12146.8 gi|121638969|ref|YP_979193.1| - 0.037 13.3 0.3 1.6 8.0 0.0 2.4 2 1 0 2 2 2 0 Serine aminopeptidase, S33 AXE1 PF05448.12 gi|121638969|ref|YP_979193.1| - 0.16 10.7 0.0 0.22 10.2 0.0 1.2 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) adh_short PF00106.25 gi|121638970|ref|YP_979194.1| - 7.1e-48 162.7 1.9 1.1e-47 162.0 1.9 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121638970|ref|YP_979194.1| - 2.4e-35 122.2 3.4 3e-35 121.9 3.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121638970|ref|YP_979194.1| - 1.6e-13 51.0 0.9 2.8e-13 50.2 0.9 1.3 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|121638970|ref|YP_979194.1| - 0.0023 17.3 0.4 0.0064 15.8 0.4 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 gi|121638970|ref|YP_979194.1| - 0.0037 17.2 2.4 0.0037 17.2 2.4 1.7 1 1 0 1 1 1 1 NAD(P)H-binding ADH_N PF08240.12 gi|121638971|ref|YP_979195.1| - 7.7e-29 99.8 3.4 1.6e-28 98.8 3.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|121638971|ref|YP_979195.1| - 1.4e-22 80.1 2.1 2.6e-22 79.2 2.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121638971|ref|YP_979195.1| - 2.8e-06 28.4 0.2 4.7e-06 27.7 0.2 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|121638971|ref|YP_979195.1| - 7.7e-05 22.3 4.6 0.00011 21.8 2.6 1.9 1 1 1 2 2 2 1 Glucose dehydrogenase C-terminus WES_acyltransf PF03007.16 gi|121638972|ref|YP_979196.1| - 8e-90 301.2 0.0 1.2e-89 300.6 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121638972|ref|YP_979196.1| - 9.2e-21 74.3 0.0 1.4e-20 73.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 gi|121638973|ref|YP_979197.1| - 6.1e-84 281.9 0.0 8.6e-84 281.4 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121638973|ref|YP_979197.1| - 6.2e-29 100.8 0.0 1.1e-28 100.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121638973|ref|YP_979197.1| - 0.32 9.6 0.4 12 4.4 0.0 2.1 2 0 0 2 2 2 0 Condensation domain AMP-binding PF00501.28 gi|121638974|ref|YP_979198.1| - 2.5e-99 332.7 0.0 3e-99 332.5 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121638974|ref|YP_979198.1| - 7.5e-20 71.7 0.5 2.1e-19 70.3 0.5 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Band_7 PF01145.25 gi|121638975|ref|YP_979199.1| - 7.2e-17 62.0 1.6 1.1e-16 61.4 1.6 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Virul_fac_BrkB PF03631.15 gi|121638975|ref|YP_979199.1| - 0.043 13.4 4.6 0.066 12.8 4.6 1.3 1 0 0 1 1 1 0 Virulence factor BrkB DUF2165 PF09933.9 gi|121638975|ref|YP_979199.1| - 0.061 13.4 3.8 0.11 12.6 3.8 1.4 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) Patatin PF01734.22 gi|121638976|ref|YP_979200.1| - 1.4e-18 67.8 0.8 3.9e-18 66.4 0.8 1.8 1 1 0 1 1 1 1 Patatin-like phospholipase DUF808 PF05661.12 gi|121638977|ref|YP_979201.1| - 4.7e-114 380.5 15.1 5.8e-114 380.2 15.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF808) Bac_luciferase PF00296.20 gi|121638978|ref|YP_979202.1| - 9.1e-39 133.7 12.7 1.1e-38 133.4 12.7 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PEP_mutase PF13714.6 gi|121638978|ref|YP_979202.1| - 0.024 14.1 0.3 0.024 14.1 0.3 1.9 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase Acyl-CoA_dh_2 PF08028.11 gi|121638979|ref|YP_979203.1| - 6.1e-35 120.4 12.8 6.1e-35 120.4 12.8 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121638979|ref|YP_979203.1| - 2.2e-08 34.5 4.6 4.7e-08 33.4 4.6 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121638979|ref|YP_979203.1| - 7.5e-06 26.6 0.3 2.1e-05 25.2 0.3 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121638979|ref|YP_979203.1| - 0.0025 18.0 0.0 0.0045 17.1 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain HpaB_N PF11794.8 gi|121638979|ref|YP_979203.1| - 0.073 12.7 0.2 1.2 8.7 0.0 2.4 3 0 0 3 3 3 0 4-hydroxyphenylacetate 3-hydroxylase N terminal HxlR PF01638.17 gi|121638980|ref|YP_979204.1| - 3.3e-28 97.4 0.0 4.6e-28 96.9 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 gi|121638980|ref|YP_979204.1| - 4.8e-05 23.1 0.0 9.8e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121638980|ref|YP_979204.1| - 0.00021 21.3 0.0 0.0005 20.1 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121638980|ref|YP_979204.1| - 0.00061 19.5 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|121638980|ref|YP_979204.1| - 0.0017 18.2 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|121638980|ref|YP_979204.1| - 0.0042 16.6 0.0 0.0072 15.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|121638980|ref|YP_979204.1| - 0.012 15.4 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.27 gi|121638980|ref|YP_979204.1| - 0.04 13.9 0.1 0.091 12.7 0.1 1.6 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_psq PF05225.16 gi|121638980|ref|YP_979204.1| - 0.088 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain HTH_34 PF13601.6 gi|121638980|ref|YP_979204.1| - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.14 gi|121638980|ref|YP_979204.1| - 0.15 12.1 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_8 PF02954.19 gi|121638980|ref|YP_979204.1| - 0.17 11.7 0.5 0.29 10.9 0.1 1.6 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family Phage_CI_repr PF07022.13 gi|121638980|ref|YP_979204.1| - 0.18 11.9 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain zinc_ribbon_2 PF13240.6 gi|121638980|ref|YP_979204.1| - 0.26 11.0 0.1 0.26 11.0 0.1 1.5 2 0 0 2 2 2 0 zinc-ribbon domain Cellulase PF00150.18 gi|121638981|ref|YP_979205.1| - 0.00021 20.9 0.0 0.00059 19.4 0.0 1.7 1 1 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) PE PF00934.20 gi|121638982|ref|YP_979206.1| - 1.5e-30 105.4 18.5 1.5e-30 105.4 18.5 3.0 3 0 0 3 3 3 1 PE family Abhydrolase_3 PF07859.13 gi|121638982|ref|YP_979206.1| - 6.5e-21 75.2 1.4 6.5e-19 68.6 1.4 2.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121638982|ref|YP_979206.1| - 2.4e-08 33.3 0.2 3.3e-08 32.8 0.2 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 gi|121638982|ref|YP_979206.1| - 0.025 13.9 0.1 0.051 12.8 0.1 1.5 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|121638982|ref|YP_979206.1| - 0.079 12.6 0.2 0.53 9.9 0.1 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold DUF2974 PF11187.8 gi|121638982|ref|YP_979206.1| - 0.75 9.3 2.1 0.96 9.0 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) MDMPI_N PF11716.8 gi|121638984|ref|YP_979208.1| - 7.7e-29 101.2 0.4 1.5e-28 100.3 0.4 1.5 1 0 0 1 1 1 1 Mycothiol maleylpyruvate isomerase N-terminal domain MDMPI_C PF07398.11 gi|121638984|ref|YP_979208.1| - 3.4e-12 47.1 3.1 3.4e-12 47.1 3.1 2.1 2 0 0 2 2 2 1 MDMPI C-terminal domain DinB_2 PF12867.7 gi|121638984|ref|YP_979208.1| - 1.2e-07 32.3 0.1 2.1e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 DinB superfamily DUF664 PF04978.12 gi|121638984|ref|YP_979208.1| - 0.16 12.3 0.0 0.25 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF664) SmpB PF01668.18 gi|121638985|ref|YP_979209.1| - 1.7e-58 196.6 0.1 2e-58 196.4 0.1 1.0 1 0 0 1 1 1 1 SmpB protein FtsX_ECD PF18075.1 gi|121638986|ref|YP_979210.1| - 1.4e-15 57.7 0.1 2.3e-15 57.0 0.1 1.4 1 0 0 1 1 1 1 FtsX extracellular domain FtsX PF02687.21 gi|121638986|ref|YP_979210.1| - 4.4e-07 30.3 4.1 4.4e-07 30.3 4.1 2.7 3 0 0 3 3 3 1 FtsX-like permease family ABC_tran PF00005.27 gi|121638987|ref|YP_979211.1| - 2.2e-33 115.7 0.0 3.4e-33 115.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121638987|ref|YP_979211.1| - 5.9e-12 46.0 0.0 1.7e-06 28.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|121638987|ref|YP_979211.1| - 4.5e-06 27.1 0.0 9.1e-06 26.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|121638987|ref|YP_979211.1| - 8e-06 26.1 0.1 3.7e-05 23.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|121638987|ref|YP_979211.1| - 2.8e-05 23.7 0.1 0.00078 18.9 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|121638987|ref|YP_979211.1| - 4.9e-05 23.3 0.0 0.00011 22.1 0.0 1.6 2 0 0 2 2 1 1 RsgA GTPase AAA_29 PF13555.6 gi|121638987|ref|YP_979211.1| - 6.5e-05 22.6 0.0 0.00013 21.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|121638987|ref|YP_979211.1| - 9.4e-05 22.3 0.0 0.018 14.8 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|121638987|ref|YP_979211.1| - 0.00018 21.8 0.0 0.0008 19.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121638987|ref|YP_979211.1| - 0.0012 18.4 0.0 0.017 14.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|121638987|ref|YP_979211.1| - 0.0026 18.3 0.0 0.041 14.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|121638987|ref|YP_979211.1| - 0.003 17.9 0.0 0.013 15.9 0.0 2.0 2 0 0 2 2 2 1 RNA helicase AAA_5 PF07728.14 gi|121638987|ref|YP_979211.1| - 0.011 15.7 0.1 0.034 14.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|121638987|ref|YP_979211.1| - 0.012 15.5 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|121638987|ref|YP_979211.1| - 0.019 14.7 0.0 0.066 12.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|121638987|ref|YP_979211.1| - 0.044 14.3 0.0 0.055 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|121638987|ref|YP_979211.1| - 0.045 13.0 0.0 1 8.6 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin AAA_24 PF13479.6 gi|121638987|ref|YP_979211.1| - 0.059 13.1 0.0 0.11 12.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|121638987|ref|YP_979211.1| - 0.063 13.7 0.1 0.41 11.1 0.0 2.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 gi|121638987|ref|YP_979211.1| - 0.068 12.6 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein SbcCD_C PF13558.6 gi|121638987|ref|YP_979211.1| - 0.075 13.3 0.1 2.2 8.6 0.1 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 gi|121638987|ref|YP_979211.1| - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 2 0 0 2 2 2 0 NACHT domain MMR_HSR1 PF01926.23 gi|121638987|ref|YP_979211.1| - 0.079 13.1 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|121638987|ref|YP_979211.1| - 0.087 13.1 0.0 0.21 11.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|121638987|ref|YP_979211.1| - 0.1 11.8 0.3 0.42 9.8 0.3 1.9 1 1 0 1 1 1 0 NB-ARC domain DUF87 PF01935.17 gi|121638987|ref|YP_979211.1| - 0.13 12.3 0.0 0.31 11.1 0.0 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain TsaE PF02367.17 gi|121638987|ref|YP_979211.1| - 0.14 12.2 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF3987 PF13148.6 gi|121638987|ref|YP_979211.1| - 0.17 10.9 0.0 1.2 8.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_7 PF12775.7 gi|121638987|ref|YP_979211.1| - 0.17 11.3 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 gi|121638987|ref|YP_979211.1| - 0.18 11.9 0.0 0.36 10.9 0.0 1.6 2 0 0 2 2 1 0 Sigma-54 interaction domain MS_channel PF00924.18 gi|121638989|ref|YP_979213.1| - 4.2e-42 144.0 0.0 5.7e-42 143.6 0.0 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel CENP-C_C PF11699.8 gi|121638989|ref|YP_979213.1| - 0.17 12.1 0.0 0.3 11.3 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like PCRF PF03462.18 gi|121638990|ref|YP_979214.1| - 5.2e-56 189.6 1.0 5.2e-56 189.6 1.0 1.7 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 gi|121638990|ref|YP_979214.1| - 2.7e-36 124.0 0.3 9.3e-36 122.3 0.0 1.9 2 0 0 2 2 2 1 RF-1 domain ABC_tran_CTD PF16326.5 gi|121638990|ref|YP_979214.1| - 0.012 15.9 0.0 0.012 15.9 0.0 3.6 3 1 0 4 4 4 0 ABC transporter C-terminal domain Pyr_redox_2 PF07992.14 gi|121638991|ref|YP_979215.1| - 3.3e-10 39.7 0.0 8.5e-09 35.0 0.0 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase JAB PF01398.21 gi|121638991|ref|YP_979215.1| - 0.031 14.3 0.0 2.3 8.2 0.0 2.3 2 0 0 2 2 2 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease NTP_transf_3 PF12804.7 gi|121638991|ref|YP_979215.1| - 0.041 14.2 0.5 0.1 12.9 0.1 1.8 2 0 0 2 2 2 0 MobA-like NTP transferase domain NAD_binding_9 PF13454.6 gi|121638991|ref|YP_979215.1| - 0.077 13.0 0.2 0.27 11.2 0.0 2.2 2 1 0 2 2 2 0 FAD-NAD(P)-binding Shikimate_DH PF01488.20 gi|121638991|ref|YP_979215.1| - 0.13 12.3 0.0 1.4 9.0 0.0 2.4 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase FAD-oxidase_C PF02913.19 gi|121638992|ref|YP_979216.1| - 1.5e-48 165.6 0.1 2.1e-48 165.1 0.1 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|121638992|ref|YP_979216.1| - 1.1e-32 112.7 0.0 2.5e-32 111.5 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain Mob_synth_C PF06463.13 gi|121638994|ref|YP_979218.1| - 2e-34 118.3 0.0 3.1e-34 117.7 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 gi|121638994|ref|YP_979218.1| - 9.6e-29 100.9 0.0 1.5e-28 100.3 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121638994|ref|YP_979218.1| - 1e-05 25.8 0.0 1.8e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|121638994|ref|YP_979218.1| - 3.3e-05 24.0 0.0 6.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Pterin_4a PF01329.19 gi|121638995|ref|YP_979219.1| - 5.2e-22 77.8 0.0 6.6e-22 77.5 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase MoaC PF01967.21 gi|121638996|ref|YP_979220.1| - 1.7e-53 180.3 2.8 2.1e-53 180.1 2.8 1.1 1 0 0 1 1 1 1 MoaC family ThiS PF02597.20 gi|121638997|ref|YP_979221.1| - 5.3e-18 65.4 0.1 6e-18 65.3 0.1 1.0 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 gi|121638997|ref|YP_979221.1| - 0.17 11.9 0.0 0.58 10.3 0.0 1.9 1 1 0 1 1 1 0 ThiS-like ubiquitin HAD_2 PF13419.6 gi|121638998|ref|YP_979222.1| - 1.4e-15 57.8 0.0 1.9e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121638998|ref|YP_979222.1| - 9.3e-07 29.4 0.0 1.4e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121638998|ref|YP_979222.1| - 1.8e-06 27.9 0.0 3.4e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|121638998|ref|YP_979222.1| - 8.8e-06 26.2 0.1 0.0023 18.2 0.1 2.8 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase dCMP_cyt_deam_1 PF00383.23 gi|121638999|ref|YP_979223.1| - 4.4e-15 55.4 0.0 5.7e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|121638999|ref|YP_979223.1| - 2.7e-07 30.4 0.0 3.3e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|121638999|ref|YP_979223.1| - 0.075 13.1 1.4 1.2 9.3 0.8 2.7 1 1 2 3 3 3 0 Bd3614-like deaminase Transposase_mut PF00872.18 gi|121639000|ref|YP_979224.1| - 1.4e-154 514.6 0.0 1.6e-154 514.4 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121639000|ref|YP_979224.1| - 2e-05 24.9 0.0 5.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain ThiF PF00899.21 gi|121639001|ref|YP_979225.1| - 1.1e-65 221.4 0.0 1.7e-65 220.8 0.0 1.1 1 0 0 1 1 1 1 ThiF family Rhodanese PF00581.20 gi|121639001|ref|YP_979225.1| - 4.6e-18 65.7 0.0 1.6e-17 63.9 0.0 1.9 2 0 0 2 2 2 1 Rhodanese-like domain Shikimate_DH PF01488.20 gi|121639001|ref|YP_979225.1| - 0.013 15.6 0.1 0.083 13.0 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Rhodanese PF00581.20 gi|121639002|ref|YP_979226.1| - 9.6e-34 116.1 0.2 2.1e-15 57.2 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain p450 PF00067.22 gi|121639002|ref|YP_979226.1| - 0.18 10.5 0.1 0.28 9.9 0.1 1.2 1 0 0 1 1 1 0 Cytochrome P450 DUF2313 PF10076.9 gi|121639003|ref|YP_979227.1| - 0.14 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) DDE_Tnp_ISL3 PF01610.17 gi|121639004|ref|YP_979228.1| - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Transposase VHL_C PF17211.3 gi|121639004|ref|YP_979228.1| - 0.13 12.3 0.5 0.23 11.5 0.5 1.3 1 0 0 1 1 1 0 VHL box domain BTAD PF03704.17 gi|121639005|ref|YP_979229.1| - 6.8e-46 156.3 0.2 9.8e-46 155.8 0.2 1.2 1 0 0 1 1 1 1 Bacterial transcriptional activator domain Trans_reg_C PF00486.28 gi|121639005|ref|YP_979229.1| - 3.5e-15 55.8 0.0 6.2e-15 55.0 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal TPR_14 PF13428.6 gi|121639005|ref|YP_979229.1| - 0.035 14.9 5.4 2.4 9.2 0.0 3.8 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 gi|121639005|ref|YP_979229.1| - 0.041 14.4 0.5 1.5 9.4 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat PE_PPE_C PF12484.8 gi|121639006|ref|YP_979230.1| - 3.6e-14 53.4 20.5 2.1e-12 47.8 20.5 2.0 1 1 0 1 1 1 1 Polymorphic PE/PPE proteins C terminal PPE PF00823.19 gi|121639007|ref|YP_979231.1| - 4.5e-60 202.3 24.1 4.5e-60 202.3 24.1 2.1 1 1 1 2 2 2 1 PPE family Nitroreductase PF00881.24 gi|121639009|ref|YP_979233.1| - 3.4e-08 33.7 1.1 0.00069 19.7 0.0 3.2 3 1 1 4 4 4 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121639009|ref|YP_979233.1| - 0.00028 20.5 0.0 0.085 12.4 0.0 2.2 2 0 0 2 2 2 2 Putative TM nitroreductase rve PF00665.26 gi|121639011|ref|YP_979235.1| - 0.00014 22.1 0.0 0.00019 21.6 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain Pyridox_ox_2 PF12900.7 gi|121639012|ref|YP_979236.1| - 1.8e-12 47.4 0.5 2.1e-12 47.2 0.5 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase WES_acyltransf PF03007.16 gi|121639013|ref|YP_979237.1| - 3e-79 266.5 0.3 5.4e-79 265.7 0.3 1.4 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639013|ref|YP_979237.1| - 8.9e-29 100.3 0.0 1.4e-28 99.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AATase PF07247.12 gi|121639013|ref|YP_979237.1| - 0.015 13.9 0.0 0.021 13.4 0.0 1.1 1 0 0 1 1 1 0 Alcohol acetyltransferase Nitroreductase PF00881.24 gi|121639014|ref|YP_979238.1| - 5e-13 49.5 1.3 7.5e-05 22.8 0.0 3.5 3 1 1 4 4 4 3 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121639014|ref|YP_979238.1| - 0.25 10.9 0.0 0.7 9.4 0.0 1.7 2 0 0 2 2 2 0 Putative TM nitroreductase GAF_2 PF13185.6 gi|121639015|ref|YP_979239.1| - 4.3e-26 91.9 10.7 2e-15 57.3 0.2 2.8 3 0 0 3 3 3 2 GAF domain GAF PF01590.26 gi|121639015|ref|YP_979239.1| - 4.8e-22 79.0 5.3 6.4e-13 49.5 0.0 2.9 3 0 0 3 3 3 2 GAF domain GAF_3 PF13492.6 gi|121639015|ref|YP_979239.1| - 4.9e-17 62.5 0.2 5.1e-07 30.1 0.1 2.8 2 1 0 2 2 2 2 GAF domain HisKA_3 PF07730.13 gi|121639015|ref|YP_979239.1| - 1.7e-12 47.7 1.3 1.7e-12 47.7 1.3 3.3 3 0 0 3 3 3 1 Histidine kinase HATPase_c PF02518.26 gi|121639015|ref|YP_979239.1| - 1.1e-09 38.8 0.1 1.5e-08 35.1 0.1 2.5 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121639015|ref|YP_979239.1| - 2.8e-06 27.3 0.1 1.1e-05 25.4 0.1 2.2 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain CodY PF06018.14 gi|121639015|ref|YP_979239.1| - 0.016 14.7 0.0 0.045 13.2 0.0 1.7 2 0 0 2 2 2 0 CodY GAF-like domain HATPase_c_3 PF13589.6 gi|121639015|ref|YP_979239.1| - 0.027 14.3 0.0 0.048 13.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 gi|121639016|ref|YP_979240.1| - 2.1e-23 82.7 0.0 3.4e-23 81.9 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 gi|121639016|ref|YP_979240.1| - 6.3e-18 64.1 0.1 1.2e-17 63.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|121639016|ref|YP_979240.1| - 3.6e-05 23.3 0.1 7.9e-05 22.2 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|121639016|ref|YP_979240.1| - 0.0022 17.5 0.1 0.0037 16.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 gi|121639016|ref|YP_979240.1| - 0.0087 15.6 0.1 0.02 14.4 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|121639016|ref|YP_979240.1| - 0.0091 15.7 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121639016|ref|YP_979240.1| - 0.0093 15.7 0.3 0.028 14.2 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain Fas_alpha_ACP PF18325.1 gi|121639016|ref|YP_979240.1| - 0.02 15.3 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain HTH_40 PF14493.6 gi|121639016|ref|YP_979240.1| - 0.026 15.0 0.0 0.045 14.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Usp PF00582.26 gi|121639017|ref|YP_979241.1| - 5.8e-22 78.7 8.1 3.3e-20 73.0 2.3 2.2 2 0 0 2 2 2 2 Universal stress protein family zf-HC3 PF16827.5 gi|121639017|ref|YP_979241.1| - 3.1 8.1 4.5 18 5.6 0.0 3.1 4 0 0 4 4 4 0 zinc-finger PPE PF00823.19 gi|121639018|ref|YP_979242.1| - 4.8e-61 205.5 28.7 4.8e-61 205.5 28.7 1.9 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121639018|ref|YP_979242.1| - 2e-15 57.5 8.8 2e-15 57.5 8.8 5.0 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal CCDC24 PF15669.5 gi|121639018|ref|YP_979242.1| - 0.0028 17.5 0.8 0.0044 16.9 0.8 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 24 family PPE PF00823.19 gi|121639019|ref|YP_979243.1| - 1.4e-60 204.0 26.9 1.4e-60 204.0 26.9 1.5 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121639019|ref|YP_979243.1| - 3.3e-17 63.1 11.2 3.3e-17 63.1 11.2 4.9 3 1 0 3 3 3 1 Polymorphic PE/PPE proteins C terminal DUF5529 PF17669.1 gi|121639019|ref|YP_979243.1| - 3.6 7.6 9.1 1.8 8.5 3.2 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5529) Inositol_P PF00459.25 gi|121639020|ref|YP_979244.1| - 6.5e-45 153.8 0.0 7.9e-45 153.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family Radical_SAM PF04055.21 gi|121639021|ref|YP_979245.1| - 1.7e-15 57.8 0.1 2.9e-15 57.0 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|121639021|ref|YP_979245.1| - 0.018 15.3 0.2 0.048 13.9 0.0 1.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain Acyl-CoA_dh_1 PF00441.24 gi|121639022|ref|YP_979246.1| - 4.5e-29 101.6 0.6 7.8e-29 100.8 0.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639022|ref|YP_979246.1| - 2e-21 76.7 0.1 8e-21 74.8 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639022|ref|YP_979246.1| - 7.3e-14 52.2 0.1 1.9e-13 50.9 0.1 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639022|ref|YP_979246.1| - 1.8e-12 47.3 0.0 3.4e-12 46.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|121639023|ref|YP_979247.1| - 8.7e-34 116.9 0.9 1.5e-33 116.1 0.9 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639023|ref|YP_979247.1| - 3.2e-25 88.2 0.1 8.6e-25 86.8 0.0 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121639023|ref|YP_979247.1| - 5.2e-11 43.0 1.9 5.5e-11 42.9 0.4 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain ADH_zinc_N PF00107.26 gi|121639024|ref|YP_979248.1| - 2.4e-27 95.5 0.8 4.1e-27 94.7 0.2 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121639024|ref|YP_979248.1| - 5.2e-18 66.4 0.0 1.1e-17 65.3 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121639024|ref|YP_979248.1| - 1.2e-07 31.6 0.0 3.8e-07 30.0 0.0 1.8 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain DapB_N PF01113.20 gi|121639024|ref|YP_979248.1| - 0.017 15.3 1.5 0.031 14.4 1.5 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus EspG PF06872.11 gi|121639025|ref|YP_979249.1| - 0.046 12.3 0.0 0.058 12.0 0.0 1.1 1 0 0 1 1 1 0 EspG protein pPIWI_RE_REase PF18154.1 gi|121639025|ref|YP_979249.1| - 0.05 13.6 0.1 0.075 13.0 0.1 1.3 1 0 0 1 1 1 0 REase associating with pPIWI_RE Response_reg PF00072.24 gi|121639026|ref|YP_979250.1| - 0.012 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Response regulator receiver domain PPE PF00823.19 gi|121639027|ref|YP_979251.1| - 6.2e-55 185.6 29.8 6.2e-55 185.6 29.8 1.8 2 0 0 2 2 2 1 PPE family Oxidored_q4 PF00507.19 gi|121639028|ref|YP_979252.1| - 6.8e-34 116.0 1.9 1.3e-33 115.1 1.9 1.4 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF4282 PF14110.6 gi|121639028|ref|YP_979252.1| - 0.057 14.2 8.2 1.4 9.7 4.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) DUF2888 PF11135.8 gi|121639028|ref|YP_979252.1| - 0.13 12.2 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2888) DUF2628 PF10947.8 gi|121639028|ref|YP_979252.1| - 2.2 8.7 7.9 23 5.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2628) Oxidored_q6 PF01058.22 gi|121639029|ref|YP_979253.1| - 9.6e-25 86.9 0.1 1.3e-24 86.5 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 gi|121639030|ref|YP_979254.1| - 1e-39 135.9 0.0 1.7e-39 135.2 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DUF2336 PF10098.9 gi|121639030|ref|YP_979254.1| - 0.021 14.3 1.9 0.03 13.8 1.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2336) Complex1_49kDa PF00346.19 gi|121639031|ref|YP_979255.1| - 4.7e-109 363.7 0.0 6e-109 363.3 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 2Fe-2S_thioredx PF01257.19 gi|121639032|ref|YP_979256.1| - 1.8e-48 164.1 0.0 2.2e-48 163.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin DUF3653 PF12375.8 gi|121639032|ref|YP_979256.1| - 0.18 11.9 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Phage protein Complex1_51K PF01512.17 gi|121639033|ref|YP_979257.1| - 2.4e-45 154.1 0.0 3.5e-45 153.6 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 gi|121639033|ref|YP_979257.1| - 9.9e-32 108.9 0.0 1.7e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 gi|121639033|ref|YP_979257.1| - 4.6e-09 36.0 0.6 8e-09 35.2 0.0 1.7 2 0 0 2 2 2 1 SLBB domain Fer2_4 PF13510.6 gi|121639034|ref|YP_979258.1| - 4.9e-20 71.4 0.3 1.8e-19 69.5 0.3 2.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Molybdopterin PF00384.22 gi|121639034|ref|YP_979258.1| - 6.8e-16 58.2 0.0 2.3e-09 36.7 0.0 2.1 2 0 0 2 2 2 2 Molybdopterin oxidoreductase NADH-G_4Fe-4S_3 PF10588.9 gi|121639034|ref|YP_979258.1| - 2.6e-15 55.7 0.6 5.7e-15 54.6 0.6 1.6 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Molydop_binding PF01568.21 gi|121639034|ref|YP_979258.1| - 6.1e-10 39.1 0.0 1.9e-09 37.5 0.0 1.8 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Fer2 PF00111.27 gi|121639034|ref|YP_979258.1| - 5.5e-07 29.4 0.3 5.5e-07 29.4 0.3 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Molybdop_Fe4S4 PF04879.16 gi|121639034|ref|YP_979258.1| - 0.0015 18.5 0.3 0.0015 18.5 0.3 2.0 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4 PF00037.27 gi|121639034|ref|YP_979258.1| - 0.24 11.3 5.1 1.7 8.6 0.2 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|121639034|ref|YP_979258.1| - 1 10.0 6.5 6.3 7.5 0.2 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain NADHdh PF00146.21 gi|121639035|ref|YP_979259.1| - 1.1e-122 409.0 20.3 1.1e-122 409.0 20.3 1.3 2 0 0 2 2 2 1 NADH dehydrogenase Fer4 PF00037.27 gi|121639036|ref|YP_979260.1| - 2.4e-17 62.0 12.0 1.8e-09 37.0 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|121639036|ref|YP_979260.1| - 1.4e-12 48.0 5.6 4e-12 46.5 6.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|121639036|ref|YP_979260.1| - 2e-11 43.2 10.0 3.7e-06 26.7 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|121639036|ref|YP_979260.1| - 2.7e-11 44.3 2.0 1.5e-05 25.8 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|121639036|ref|YP_979260.1| - 5.8e-11 42.3 17.2 6.2e-08 32.6 9.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|121639036|ref|YP_979260.1| - 7.9e-11 41.6 12.2 1.7e-05 24.6 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|121639036|ref|YP_979260.1| - 2e-09 37.5 17.7 1.1e-07 31.8 8.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|121639036|ref|YP_979260.1| - 4.3e-09 36.7 0.3 0.0013 19.1 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|121639036|ref|YP_979260.1| - 9.4e-09 35.3 20.7 1e-06 28.8 11.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|121639036|ref|YP_979260.1| - 1.7e-08 34.9 2.1 0.0051 17.3 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|121639036|ref|YP_979260.1| - 9.1e-08 32.0 7.9 0.0016 18.8 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|121639036|ref|YP_979260.1| - 3.3e-06 27.6 15.9 0.0012 19.7 3.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|121639036|ref|YP_979260.1| - 7.6e-06 26.7 1.2 0.031 15.1 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|121639036|ref|YP_979260.1| - 1e-05 26.0 7.6 0.021 15.3 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|121639036|ref|YP_979260.1| - 0.00023 21.3 1.8 0.21 11.8 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|121639036|ref|YP_979260.1| - 0.022 15.5 11.7 0.059 14.1 0.3 2.9 2 1 1 3 3 3 0 4Fe-4S single cluster domain AFP PF02420.15 gi|121639036|ref|YP_979260.1| - 1.6 9.3 9.1 18 6.1 3.4 2.5 2 0 0 2 2 2 0 Insect antifreeze protein repeat Oxidored_q3 PF00499.20 gi|121639037|ref|YP_979261.1| - 2.1e-30 105.3 25.0 3e-30 104.9 25.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF2723 PF11028.8 gi|121639037|ref|YP_979261.1| - 1.3 8.9 13.1 0.45 10.4 9.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2723) DUF5090 PF17009.5 gi|121639037|ref|YP_979261.1| - 1.3 8.9 7.3 2.2 8.2 7.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Herpes_LMP1 PF05297.11 gi|121639037|ref|YP_979261.1| - 2.3 7.4 5.5 3.3 6.8 5.5 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Oxidored_q2 PF00420.24 gi|121639038|ref|YP_979262.1| - 2.9e-24 84.7 9.3 3.4e-24 84.5 9.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF1430 PF07242.11 gi|121639038|ref|YP_979262.1| - 1.2 9.4 6.5 2.3 8.5 2.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1430) Proton_antipo_M PF00361.20 gi|121639039|ref|YP_979263.1| - 3.6e-82 275.9 14.1 3.6e-82 275.9 14.1 2.7 3 1 1 4 4 4 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|121639039|ref|YP_979263.1| - 4.1e-24 84.4 0.0 1.9e-23 82.3 0.0 2.3 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADH5_C PF06455.11 gi|121639039|ref|YP_979263.1| - 0.0008 19.0 0.3 0.0008 19.0 0.3 3.0 3 1 0 3 3 3 1 NADH dehydrogenase subunit 5 C-terminus Proton_antipo_C PF01010.19 gi|121639039|ref|YP_979263.1| - 0.004 16.8 0.0 0.0078 15.9 0.0 1.4 1 0 0 1 1 1 1 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Proton_antipo_M PF00361.20 gi|121639040|ref|YP_979264.1| - 1.1e-65 221.8 22.3 2.3e-65 220.7 22.3 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter CrgA PF06781.12 gi|121639040|ref|YP_979264.1| - 0.029 14.4 3.3 0.096 12.8 0.6 3.4 3 0 0 3 3 3 0 Cell division protein CrgA Oxidored_q5_N PF01059.17 gi|121639040|ref|YP_979264.1| - 0.075 13.1 0.0 0.075 13.1 0.0 3.7 4 0 0 4 4 4 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Proton_antipo_M PF00361.20 gi|121639041|ref|YP_979265.1| - 5.5e-70 235.9 17.2 9.9e-70 235.0 17.2 1.4 1 0 0 1 1 1 1 Proton-conducting membrane transporter Pentapeptide_2 PF01469.18 gi|121639042|ref|YP_979266.1| - 1.9e-61 203.6 329.9 9.7e-09 35.0 15.7 11.7 2 2 8 12 12 12 12 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121639042|ref|YP_979266.1| - 1.9e-53 180.8 32.4 2.7e-53 180.3 32.4 1.2 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121639043|ref|YP_979267.1| - 1.1e-62 207.6 351.0 4.3e-09 36.1 22.9 12.1 5 3 7 13 13 13 12 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121639043|ref|YP_979267.1| - 1.1e-55 188.1 34.1 1.1e-55 188.1 34.1 1.5 2 0 0 2 2 2 1 PPE family TetR_N PF00440.23 gi|121639044|ref|YP_979268.1| - 1e-16 60.4 0.9 2e-16 59.5 0.9 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|121639044|ref|YP_979268.1| - 0.00038 20.6 0.0 0.022 14.9 0.0 2.5 2 1 1 3 3 3 1 Helix-turn-helix of insertion element transposase HTH_5 PF01022.20 gi|121639044|ref|YP_979268.1| - 0.019 14.8 0.0 0.045 13.6 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family TetR_C_27 PF17935.1 gi|121639044|ref|YP_979268.1| - 0.043 13.9 0.3 0.12 12.4 0.1 2.0 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF134 PF02001.16 gi|121639044|ref|YP_979268.1| - 0.086 13.4 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF134 Cro PF09048.10 gi|121639044|ref|YP_979268.1| - 0.17 11.9 0.1 0.29 11.2 0.1 1.4 1 0 0 1 1 1 0 Cro Ring_hydroxyl_A PF00848.19 gi|121639045|ref|YP_979269.1| - 3.2e-21 76.3 0.3 2.9e-20 73.2 0.3 2.0 1 1 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 gi|121639045|ref|YP_979269.1| - 3.1e-18 65.5 0.0 5.5e-18 64.7 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain DUF58 PF01882.18 gi|121639047|ref|YP_979271.1| - 3.5e-17 62.5 1.6 9.8e-17 61.0 0.5 2.2 2 0 0 2 2 2 1 Protein of unknown function DUF58 Ntox5 PF15543.6 gi|121639047|ref|YP_979271.1| - 0.0024 17.7 0.2 0.03 14.2 0.0 2.1 2 0 0 2 2 2 1 Bacterial toxin 5 AAA_3 PF07726.11 gi|121639048|ref|YP_979272.1| - 1.5e-63 212.5 0.0 4.3e-63 211.0 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|121639048|ref|YP_979272.1| - 4.7e-18 64.8 2.2 4.7e-18 64.8 2.2 2.0 2 0 0 2 2 2 1 AAA lid domain AAA_5 PF07728.14 gi|121639048|ref|YP_979272.1| - 2.2e-11 43.9 0.0 6.6e-11 42.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|121639048|ref|YP_979272.1| - 9.8e-06 25.4 0.0 3.9e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA PF00004.29 gi|121639048|ref|YP_979272.1| - 0.0012 19.3 0.0 0.004 17.6 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121639048|ref|YP_979272.1| - 0.0014 18.4 0.0 0.007 16.1 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|121639048|ref|YP_979272.1| - 0.011 15.1 0.1 0.44 9.9 0.1 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|121639048|ref|YP_979272.1| - 0.038 13.1 0.0 0.051 12.7 0.0 1.3 1 0 0 1 1 1 0 MCM P-loop domain DUF4124 PF13511.6 gi|121639049|ref|YP_979273.1| - 0.12 12.8 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4124) DUF4129 PF13559.6 gi|121639050|ref|YP_979274.1| - 9.7e-11 41.8 1.8 9.7e-11 41.8 1.8 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4129) DUF1345 PF07077.11 gi|121639050|ref|YP_979274.1| - 0.049 13.3 1.2 0.086 12.5 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1345) LPG_synthase_TM PF03706.13 gi|121639050|ref|YP_979274.1| - 0.08 12.5 15.2 1 8.8 14.3 2.1 2 0 0 2 2 2 0 Lysylphosphatidylglycerol synthase TM region Colicin_V PF02674.16 gi|121639050|ref|YP_979274.1| - 0.36 10.8 7.3 64 3.5 0.0 2.8 2 1 0 2 2 2 0 Colicin V production protein TetR_C_11 PF16859.5 gi|121639051|ref|YP_979275.1| - 9.3e-19 67.8 12.0 1.8e-18 66.9 12.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121639051|ref|YP_979275.1| - 1.1e-15 57.1 0.3 2.2e-15 56.1 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|121639051|ref|YP_979275.1| - 0.034 14.3 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase APH PF01636.23 gi|121639052|ref|YP_979276.1| - 4.8e-21 75.8 5.9 6.7e-21 75.3 5.9 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Amino_oxidase PF01593.24 gi|121639054|ref|YP_979278.1| - 1.6e-72 245.2 1.0 1.8e-72 245.1 1.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|121639054|ref|YP_979278.1| - 3.7e-15 55.9 1.6 9.8e-15 54.5 0.9 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121639054|ref|YP_979278.1| - 2e-12 47.4 12.0 6e-12 45.8 12.0 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121639054|ref|YP_979278.1| - 7.5e-10 38.5 1.3 7.8e-07 28.6 0.8 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|121639054|ref|YP_979278.1| - 1.8e-07 30.6 0.8 1.8e-07 30.6 0.8 1.5 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|121639054|ref|YP_979278.1| - 6.1e-07 29.9 1.2 0.00021 21.8 1.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121639054|ref|YP_979278.1| - 4.6e-06 26.2 3.6 4.6e-06 26.2 3.6 2.2 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|121639054|ref|YP_979278.1| - 1.9e-05 24.1 0.1 0.14 11.3 0.1 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121639054|ref|YP_979278.1| - 2.2e-05 23.8 0.5 3.5e-05 23.1 0.5 1.2 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|121639054|ref|YP_979278.1| - 3.3e-05 22.8 1.1 5.1e-05 22.1 0.2 1.6 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|121639054|ref|YP_979278.1| - 0.00011 21.6 0.8 0.00019 20.8 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|121639054|ref|YP_979278.1| - 0.00042 19.5 0.5 0.00042 19.5 0.5 1.5 2 0 0 2 2 2 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|121639054|ref|YP_979278.1| - 0.0024 17.0 0.7 0.0059 15.7 0.1 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|121639054|ref|YP_979278.1| - 0.0066 16.4 3.7 0.13 12.3 0.4 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|121639054|ref|YP_979278.1| - 0.017 14.4 0.4 0.017 14.4 0.4 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|121639054|ref|YP_979278.1| - 0.18 12.4 0.6 4.4 8.0 0.1 2.4 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Abhydrolase_1 PF00561.20 gi|121639055|ref|YP_979279.1| - 5.3e-21 75.4 0.0 3e-19 69.7 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639055|ref|YP_979279.1| - 1.1e-20 73.9 0.7 1e-19 70.8 0.7 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121639055|ref|YP_979279.1| - 1.6e-17 64.8 7.5 2e-17 64.6 7.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 gi|121639055|ref|YP_979279.1| - 2.5e-05 24.3 0.0 6.2e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 TAP-like protein Ser_hydrolase PF06821.13 gi|121639055|ref|YP_979279.1| - 0.0059 16.5 0.0 0.65 9.8 0.0 2.4 2 1 0 2 2 2 1 Serine hydrolase Chlorophyllase2 PF12740.7 gi|121639055|ref|YP_979279.1| - 0.012 14.6 0.0 0.045 12.7 0.0 1.9 2 0 0 2 2 2 0 Chlorophyllase enzyme Abhydrolase_5 PF12695.7 gi|121639055|ref|YP_979279.1| - 0.028 14.2 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|121639055|ref|YP_979279.1| - 0.046 13.2 0.0 1.4 8.3 0.0 2.3 2 0 0 2 2 2 0 Prolyl oligopeptidase family FSH1 PF03959.13 gi|121639055|ref|YP_979279.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF4440 PF14534.6 gi|121639056|ref|YP_979280.1| - 0.032 14.6 0.2 0.056 13.9 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4440) TetR_N PF00440.23 gi|121639057|ref|YP_979281.1| - 2.3e-17 62.5 3.0 3.7e-17 61.9 0.1 2.5 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family adh_short PF00106.25 gi|121639058|ref|YP_979282.1| - 2.5e-31 108.7 0.1 3.1e-31 108.3 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639058|ref|YP_979282.1| - 7.6e-20 71.5 0.5 9.3e-20 71.2 0.5 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.6 gi|121639058|ref|YP_979282.1| - 4.8e-05 23.3 0.3 0.00011 22.2 0.3 1.5 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|121639058|ref|YP_979282.1| - 0.0026 17.7 0.6 0.0062 16.5 0.6 1.7 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121639058|ref|YP_979282.1| - 0.014 14.9 0.0 0.027 14.0 0.1 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family LIP PF03583.14 gi|121639058|ref|YP_979282.1| - 0.13 11.6 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase Amidase PF01425.21 gi|121639059|ref|YP_979283.1| - 1.6e-130 436.1 0.3 1.8e-130 435.9 0.3 1.0 1 0 0 1 1 1 1 Amidase Abhydrolase_1 PF00561.20 gi|121639061|ref|YP_979285.1| - 2e-07 30.9 0.0 2.6e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121639061|ref|YP_979285.1| - 1.1e-06 29.4 1.9 1.7e-06 28.8 1.9 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639062|ref|YP_979286.1| - 4.1e-24 85.6 0.2 3.9e-22 79.1 0.2 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639062|ref|YP_979286.1| - 2.2e-17 63.1 0.0 3.3e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|121639062|ref|YP_979286.1| - 8.8e-16 59.2 0.6 1.1e-15 58.8 0.6 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 gi|121639062|ref|YP_979286.1| - 4e-06 26.5 0.1 0.0028 17.3 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|121639062|ref|YP_979286.1| - 6.7e-06 25.7 0.1 0.00077 19.0 0.0 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family FSH1 PF03959.13 gi|121639062|ref|YP_979286.1| - 0.00092 18.9 0.1 0.0043 16.7 0.1 1.9 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 gi|121639062|ref|YP_979286.1| - 0.0011 19.0 0.0 0.0019 18.2 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Palm_thioest PF02089.15 gi|121639062|ref|YP_979286.1| - 0.0017 18.3 0.0 0.0029 17.5 0.0 1.4 1 1 0 1 1 1 1 Palmitoyl protein thioesterase DUF2048 PF09752.9 gi|121639062|ref|YP_979286.1| - 0.0018 17.4 0.0 0.0024 17.0 0.0 1.1 1 0 0 1 1 1 1 Abhydrolase domain containing 18 Thioesterase PF00975.20 gi|121639062|ref|YP_979286.1| - 0.0034 17.5 0.0 0.0094 16.1 0.0 1.6 2 0 0 2 2 2 1 Thioesterase domain PGAP1 PF07819.13 gi|121639062|ref|YP_979286.1| - 0.0053 16.5 0.1 0.056 13.1 0.0 2.6 2 1 1 3 3 3 1 PGAP1-like protein Peptidase_S15 PF02129.18 gi|121639062|ref|YP_979286.1| - 0.0068 16.0 0.1 0.035 13.7 0.1 2.0 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) UPF0227 PF05728.12 gi|121639062|ref|YP_979286.1| - 0.05 13.6 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) BAAT_C PF08840.11 gi|121639062|ref|YP_979286.1| - 0.075 12.9 0.0 0.48 10.3 0.0 2.1 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal F420H2_quin_red PF04075.14 gi|121639063|ref|YP_979287.1| - 9.4e-30 103.4 0.0 1.1e-29 103.2 0.0 1.0 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase DUF4143 PF13635.6 gi|121639065|ref|YP_979289.1| - 3.7e-26 91.7 0.0 5.1e-26 91.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_14 PF13173.6 gi|121639065|ref|YP_979289.1| - 7.6e-19 68.1 0.0 2.6e-18 66.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|121639065|ref|YP_979289.1| - 0.0013 19.1 0.1 0.0029 18.0 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|121639065|ref|YP_979289.1| - 0.0023 18.1 0.0 0.0068 16.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain DUF746 PF05344.11 gi|121639065|ref|YP_979289.1| - 0.003 17.4 0.0 0.012 15.4 0.0 2.0 2 0 0 2 2 2 1 Domain of Unknown Function (DUF746) ATPase_2 PF01637.18 gi|121639065|ref|YP_979289.1| - 0.037 13.9 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_35 PF14516.6 gi|121639065|ref|YP_979289.1| - 0.048 12.5 0.0 0.092 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain AAA_28 PF13521.6 gi|121639065|ref|YP_979289.1| - 0.055 13.7 0.0 2.6 8.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|121639065|ref|YP_979289.1| - 0.081 12.6 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain TsaE PF02367.17 gi|121639065|ref|YP_979289.1| - 0.093 12.7 0.0 0.26 11.3 0.0 1.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Put_DNA-bind_N PF06971.13 gi|121639065|ref|YP_979289.1| - 0.13 12.4 0.0 0.89 9.6 0.0 2.4 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus SRPRB PF09439.10 gi|121639065|ref|YP_979289.1| - 0.15 11.5 0.0 0.3 10.5 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Rad17 PF03215.15 gi|121639065|ref|YP_979289.1| - 0.21 11.5 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain PIN PF01850.21 gi|121639066|ref|YP_979290.1| - 3e-12 47.1 0.5 3.6e-12 46.9 0.5 1.0 1 0 0 1 1 1 1 PIN domain PhdYeFM_antitox PF02604.19 gi|121639067|ref|YP_979291.1| - 4.9e-13 48.7 0.0 7.9e-13 48.0 0.0 1.3 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system Gp49 PF05973.14 gi|121639068|ref|YP_979292.1| - 3.6e-23 81.5 0.0 4.1e-23 81.3 0.0 1.0 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) DUF1870 PF08965.10 gi|121639068|ref|YP_979292.1| - 0.12 12.4 0.0 0.2 11.7 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1870) HTH_37 PF13744.6 gi|121639069|ref|YP_979293.1| - 1.8e-10 40.6 0.4 2.3e-10 40.3 0.4 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|121639069|ref|YP_979293.1| - 5.6e-09 35.9 0.0 8.6e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121639069|ref|YP_979293.1| - 9.4e-08 32.3 2.0 9.4e-08 32.3 2.0 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|121639069|ref|YP_979293.1| - 0.00079 19.4 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|121639069|ref|YP_979293.1| - 0.005 17.2 0.0 0.012 16.0 0.0 1.6 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain DUF1810 PF08837.11 gi|121639069|ref|YP_979293.1| - 0.024 14.4 0.1 0.03 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) Sigma70_r4 PF04545.16 gi|121639069|ref|YP_979293.1| - 0.024 14.1 0.0 0.044 13.3 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2384 PF09722.10 gi|121639070|ref|YP_979294.1| - 9.4e-05 22.4 0.0 0.00022 21.2 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2384) Rv2175c_C PF18367.1 gi|121639070|ref|YP_979294.1| - 0.0016 18.4 0.1 0.003 17.6 0.1 1.5 1 0 0 1 1 1 1 Rv2175c C-terminal domain of unknown function HTH_3 PF01381.22 gi|121639070|ref|YP_979294.1| - 0.026 14.6 0.0 0.039 14.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix P22_Cro PF14549.6 gi|121639070|ref|YP_979294.1| - 0.031 14.1 0.0 0.064 13.1 0.0 1.5 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro Phage_terminase PF10668.9 gi|121639070|ref|YP_979294.1| - 0.082 12.9 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Phage terminase small subunit RES PF08808.11 gi|121639071|ref|YP_979295.1| - 1.1e-15 57.9 2.7 1.3e-15 57.7 2.3 1.3 1 1 0 1 1 1 1 RES domain HTH_38 PF13936.6 gi|121639073|ref|YP_979297.1| - 2.8e-20 71.8 7.2 6.8e-17 61.0 2.9 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_23 PF13384.6 gi|121639073|ref|YP_979297.1| - 4.6e-10 39.0 10.5 1e-08 34.7 0.7 2.7 3 0 0 3 3 2 2 Homeodomain-like domain rve PF00665.26 gi|121639073|ref|YP_979297.1| - 3.4e-09 36.9 0.0 6e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_32 PF13565.6 gi|121639073|ref|YP_979297.1| - 3.3e-07 30.8 17.7 8.4e-07 29.5 8.2 3.4 2 1 1 3 3 3 2 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|121639073|ref|YP_979297.1| - 0.01 15.5 0.1 0.077 12.7 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_50 PF18024.1 gi|121639073|ref|YP_979297.1| - 0.017 14.7 0.6 0.042 13.5 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|121639073|ref|YP_979297.1| - 0.038 13.5 1.5 0.12 11.9 0.1 2.5 2 1 1 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_7 PF02796.15 gi|121639073|ref|YP_979297.1| - 0.041 14.0 0.1 0.22 11.6 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_35 PF13693.6 gi|121639073|ref|YP_979297.1| - 0.053 13.6 0.5 0.16 12.0 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|121639073|ref|YP_979297.1| - 0.055 13.0 0.0 0.16 11.6 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_20 PF12840.7 gi|121639073|ref|YP_979297.1| - 0.07 13.2 0.2 8.3 6.6 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121639073|ref|YP_979297.1| - 0.07 12.9 0.3 0.21 11.4 0.1 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_40 PF14493.6 gi|121639073|ref|YP_979297.1| - 0.13 12.7 0.0 0.36 11.3 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|121639073|ref|YP_979297.1| - 0.18 12.0 0.2 0.18 12.0 0.2 3.6 4 0 0 4 4 3 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|121639073|ref|YP_979297.1| - 0.22 11.4 0.2 0.22 11.4 0.2 2.7 3 0 0 3 3 3 0 MarR family HTH_29 PF13551.6 gi|121639073|ref|YP_979297.1| - 4 7.5 10.6 0.62 10.1 1.6 3.2 3 1 0 3 3 2 0 Winged helix-turn helix Bac_luciferase PF00296.20 gi|121639074|ref|YP_979298.1| - 1.6e-12 47.5 0.1 1.9e-12 47.3 0.1 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase UPF0182 PF03699.13 gi|121639075|ref|YP_979299.1| - 8.9e-267 887.2 0.0 1.1e-266 886.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0182) PDZ_2 PF13180.6 gi|121639076|ref|YP_979300.1| - 7.5e-11 42.2 0.0 2e-10 40.8 0.0 1.7 1 0 0 1 1 1 1 PDZ domain Lon_C PF05362.13 gi|121639076|ref|YP_979300.1| - 8.5e-09 35.2 0.3 1.7e-08 34.3 0.3 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain PDZ_6 PF17820.1 gi|121639076|ref|YP_979300.1| - 3.7e-06 26.7 0.2 9.6e-06 25.4 0.0 1.8 2 0 0 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 gi|121639076|ref|YP_979300.1| - 0.00022 21.1 0.1 0.00069 19.5 0.0 1.8 2 0 0 2 2 2 1 Tricorn protease PDZ domain PDZ PF00595.24 gi|121639076|ref|YP_979300.1| - 0.00052 20.3 0.0 0.0017 18.7 0.0 1.9 1 0 0 1 1 1 1 PDZ domain PDZ_1 PF12812.7 gi|121639076|ref|YP_979300.1| - 0.037 14.1 0.0 0.074 13.1 0.0 1.5 1 0 0 1 1 1 0 PDZ-like domain Zincin_2 PF10103.9 gi|121639077|ref|YP_979301.1| - 6.8e-112 374.0 4.5 8.6e-112 373.7 4.5 1.1 1 0 0 1 1 1 1 Zincin-like metallopeptidase ABC1 PF03109.16 gi|121639080|ref|YP_979304.1| - 4e-34 117.3 0.0 8.5e-34 116.3 0.0 1.5 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 gi|121639080|ref|YP_979304.1| - 6.4e-08 32.8 3.9 2.2e-07 31.1 1.3 2.7 1 1 2 3 3 3 2 Phosphotransferase enzyme family RIO1 PF01163.22 gi|121639080|ref|YP_979304.1| - 0.00043 19.9 0.0 0.0027 17.3 0.0 2.2 2 0 0 2 2 2 1 RIO1 family Pkinase PF00069.25 gi|121639080|ref|YP_979304.1| - 0.081 12.3 0.0 0.61 9.4 0.0 2.1 1 1 0 1 1 1 0 Protein kinase domain Whib PF02467.16 gi|121639081|ref|YP_979305.1| - 5.2e-14 52.6 0.1 6.9e-14 52.2 0.1 1.1 1 0 0 1 1 1 1 Transcription factor WhiB AT_hook PF02178.19 gi|121639081|ref|YP_979305.1| - 0.0018 17.9 3.9 0.0039 16.9 3.9 1.6 1 0 0 1 1 1 1 AT hook motif UvrD-helicase PF00580.21 gi|121639082|ref|YP_979306.1| - 5e-48 164.2 0.0 2.1e-45 155.6 0.0 2.2 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|121639082|ref|YP_979306.1| - 2.1e-39 135.2 0.1 4.3e-39 134.2 0.1 1.5 1 0 0 1 1 1 1 AAA domain UvrD_C PF13361.6 gi|121639082|ref|YP_979306.1| - 1.8e-38 132.8 0.0 2.7e-19 69.8 0.0 2.1 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain HRDC PF00570.23 gi|121639082|ref|YP_979306.1| - 8.1e-22 77.0 0.0 1.7e-21 76.0 0.0 1.6 1 0 0 1 1 1 1 HRDC domain UvrD_C_2 PF13538.6 gi|121639082|ref|YP_979306.1| - 1.9e-09 37.2 0.2 3.2e-08 33.3 0.2 2.7 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|121639082|ref|YP_979306.1| - 0.00074 19.3 9.2 0.025 14.3 9.2 2.6 1 1 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 gi|121639082|ref|YP_979306.1| - 0.1 12.4 0.7 15 5.2 0.0 3.1 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase Glutaredoxin PF00462.24 gi|121639083|ref|YP_979307.1| - 4.8e-12 45.9 0.0 6.6e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 gi|121639083|ref|YP_979307.1| - 0.015 15.7 0.1 0.17 12.3 0.1 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin PF00085.20 gi|121639083|ref|YP_979307.1| - 0.028 14.4 0.0 0.041 13.9 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin GST_N_3 PF13417.6 gi|121639083|ref|YP_979307.1| - 0.039 14.3 0.0 0.047 14.1 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|121639083|ref|YP_979307.1| - 0.052 14.0 0.0 0.056 13.9 0.0 1.3 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) HCBP_related PF06594.11 gi|121639083|ref|YP_979307.1| - 0.097 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Haemolysin-type calcium binding protein related domain SH3BGR PF04908.15 gi|121639083|ref|YP_979307.1| - 0.17 12.1 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein NUDIX PF00293.28 gi|121639084|ref|YP_979308.1| - 5.9e-19 68.4 0.5 1e-18 67.6 0.2 1.5 2 0 0 2 2 2 1 NUDIX domain zf-NADH-PPase PF09297.11 gi|121639084|ref|YP_979308.1| - 2.8e-09 36.5 0.0 5.8e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 gi|121639084|ref|YP_979308.1| - 1.4e-06 28.9 0.2 3.3e-06 27.7 0.2 1.6 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain TrkA_N PF02254.18 gi|121639085|ref|YP_979309.1| - 4.3e-27 94.7 4.2 7.2e-27 94.0 4.2 1.4 1 0 0 1 1 1 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|121639085|ref|YP_979309.1| - 5.7e-14 51.8 3.5 1.3e-13 50.7 3.5 1.6 1 0 0 1 1 1 1 Ion channel PK_C PF02887.16 gi|121639085|ref|YP_979309.1| - 0.012 15.8 4.5 0.04 14.2 0.7 2.7 2 1 0 2 2 2 0 Pyruvate kinase, alpha/beta domain NmrA PF05368.13 gi|121639085|ref|YP_979309.1| - 0.11 12.0 3.1 0.18 11.3 3.1 1.2 1 0 0 1 1 1 0 NmrA-like family BATS PF06968.13 gi|121639085|ref|YP_979309.1| - 0.11 12.6 0.1 0.27 11.4 0.1 1.6 1 0 0 1 1 1 0 Biotin and Thiamin Synthesis associated domain UvrD-helicase PF00580.21 gi|121639086|ref|YP_979310.1| - 5e-39 134.7 0.0 2e-38 132.7 0.0 1.8 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|121639086|ref|YP_979310.1| - 1.1e-29 104.0 0.0 3e-17 63.1 0.0 2.1 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|121639086|ref|YP_979310.1| - 3.1e-21 76.2 0.0 5.6e-21 75.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain PDDEXK_1 PF12705.7 gi|121639086|ref|YP_979310.1| - 2.4e-13 50.6 0.0 2.5e-12 47.2 0.0 2.6 2 1 0 2 2 2 1 PD-(D/E)XK nuclease superfamily UvrD_C_2 PF13538.6 gi|121639086|ref|YP_979310.1| - 3.7e-08 33.1 4.6 0.0016 18.2 0.8 2.7 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|121639086|ref|YP_979310.1| - 0.0024 17.6 1.3 0.0024 17.6 1.3 2.4 2 0 0 2 2 2 1 AAA domain Exonuc_V_gamma PF04257.14 gi|121639086|ref|YP_979310.1| - 0.0096 14.2 0.0 0.014 13.6 0.0 1.1 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit PDDEXK_1 PF12705.7 gi|121639087|ref|YP_979311.1| - 5.1e-41 141.3 0.0 8.5e-41 140.5 0.0 1.4 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily UvrD-helicase PF00580.21 gi|121639087|ref|YP_979311.1| - 1.2e-35 123.5 0.0 1.7e-35 123.1 0.0 1.1 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|121639087|ref|YP_979311.1| - 2e-14 53.7 0.0 2.4e-13 50.2 0.0 2.0 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|121639087|ref|YP_979311.1| - 3.4e-14 53.4 0.0 9.8e-14 51.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|121639087|ref|YP_979311.1| - 0.0014 18.4 4.9 0.069 12.9 0.7 2.8 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 gi|121639087|ref|YP_979311.1| - 0.0092 15.7 0.1 2 8.1 0.1 2.4 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|121639087|ref|YP_979311.1| - 0.044 13.0 0.1 0.11 11.8 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 gi|121639087|ref|YP_979311.1| - 0.061 13.6 0.2 14 5.9 0.0 2.8 2 0 0 2 2 2 0 AAA domain UvrD_C_2 PF13538.6 gi|121639087|ref|YP_979311.1| - 0.075 12.9 1.4 2.4 8.1 0.3 3.0 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain AAA_29 PF13555.6 gi|121639087|ref|YP_979311.1| - 0.11 12.3 0.0 0.3 10.9 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|121639087|ref|YP_979311.1| - 4.1 6.9 9.7 0.9 9.1 0.3 3.8 4 0 0 4 4 4 0 AAA domain Abhydrolase_6 PF12697.7 gi|121639089|ref|YP_979313.1| - 3.6e-17 63.7 15.3 4.2e-17 63.5 15.3 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639089|ref|YP_979313.1| - 5.5e-12 45.9 0.1 2.6e-11 43.6 0.2 1.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639089|ref|YP_979313.1| - 1.8e-10 40.5 0.0 2.7e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 gi|121639089|ref|YP_979313.1| - 8.5e-07 29.3 0.1 1.1e-06 29.0 0.1 1.6 1 1 0 1 1 1 1 Thioesterase domain Esterase PF00756.20 gi|121639089|ref|YP_979313.1| - 7.2e-05 22.5 0.0 8.9e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Ser_hydrolase PF06821.13 gi|121639089|ref|YP_979313.1| - 0.00018 21.4 0.2 0.0003 20.7 0.2 1.4 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_3 PF07859.13 gi|121639089|ref|YP_979313.1| - 0.00066 19.6 0.3 0.00089 19.2 0.3 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 gi|121639089|ref|YP_979313.1| - 0.00079 19.3 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 gi|121639089|ref|YP_979313.1| - 0.0027 17.5 0.0 0.0039 17.0 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Chlorophyllase2 PF12740.7 gi|121639089|ref|YP_979313.1| - 0.015 14.2 0.1 0.023 13.6 0.1 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme DLH PF01738.18 gi|121639089|ref|YP_979313.1| - 0.021 14.4 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family BAAT_C PF08840.11 gi|121639089|ref|YP_979313.1| - 0.034 14.1 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_5 PF12695.7 gi|121639089|ref|YP_979313.1| - 0.056 13.2 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family LIDHydrolase PF10230.9 gi|121639089|ref|YP_979313.1| - 0.06 12.9 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase DUF2048 PF09752.9 gi|121639089|ref|YP_979313.1| - 0.07 12.2 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Abhydrolase domain containing 18 PAF-AH_p_II PF03403.13 gi|121639089|ref|YP_979313.1| - 0.078 11.5 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II UPF0227 PF05728.12 gi|121639089|ref|YP_979313.1| - 0.079 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) DUF3530 PF12048.8 gi|121639089|ref|YP_979313.1| - 0.079 12.4 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Esterase_phd PF10503.9 gi|121639089|ref|YP_979313.1| - 0.086 12.3 2.4 0.12 11.8 2.4 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase DUF2974 PF11187.8 gi|121639089|ref|YP_979313.1| - 0.095 12.2 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Acyl_transf_1 PF00698.21 gi|121639089|ref|YP_979313.1| - 0.13 11.8 0.7 0.2 11.1 0.7 1.2 1 0 0 1 1 1 0 Acyl transferase domain DUF3089 PF11288.8 gi|121639089|ref|YP_979313.1| - 0.19 11.2 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DNA_binding_1 PF01035.20 gi|121639090|ref|YP_979314.1| - 7.1e-18 64.5 0.0 8.9e-18 64.2 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain XylR_N PF06505.11 gi|121639091|ref|YP_979315.1| - 0.095 12.5 0.0 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 Activator of aromatic catabolism ThiF PF00899.21 gi|121639092|ref|YP_979316.1| - 7.3e-58 195.8 0.0 1e-57 195.3 0.0 1.1 1 0 0 1 1 1 1 ThiF family Rhodanese PF00581.20 gi|121639092|ref|YP_979316.1| - 8.4e-15 55.2 0.0 2.2e-14 53.8 0.0 1.7 2 0 0 2 2 2 1 Rhodanese-like domain Shikimate_DH PF01488.20 gi|121639092|ref|YP_979316.1| - 0.022 14.8 0.1 0.055 13.5 0.1 1.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase SelB-wing_3 PF09107.11 gi|121639092|ref|YP_979316.1| - 0.039 13.6 0.0 0.082 12.6 0.0 1.5 1 0 0 1 1 1 0 Elongation factor SelB, winged helix TIP39 PF14980.6 gi|121639092|ref|YP_979316.1| - 0.076 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 TIP39 peptide DAO PF01266.24 gi|121639092|ref|YP_979316.1| - 0.097 12.2 0.3 0.28 10.7 0.1 1.9 2 0 0 2 2 2 0 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|121639092|ref|YP_979316.1| - 0.13 12.5 0.6 0.95 9.7 0.6 2.2 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 gi|121639092|ref|YP_979316.1| - 0.18 11.3 0.3 0.3 10.6 0.3 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF3152 PF11350.8 gi|121639093|ref|YP_979317.1| - 2.6e-104 347.4 0.0 3.1e-104 347.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3152) Peptidase_M10 PF00413.24 gi|121639093|ref|YP_979317.1| - 0.025 14.4 0.0 0.036 13.9 0.0 1.3 1 1 0 1 1 1 0 Matrixin Reprolysin_5 PF13688.6 gi|121639093|ref|YP_979317.1| - 0.049 13.8 0.0 0.066 13.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 TetR_N PF00440.23 gi|121639094|ref|YP_979318.1| - 1.4e-17 63.1 0.0 3.7e-17 61.9 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|121639094|ref|YP_979318.1| - 0.0039 17.5 0.0 0.006 16.8 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|121639094|ref|YP_979318.1| - 0.019 15.1 0.0 0.2 11.8 0.0 2.2 1 1 1 2 2 2 0 Helix-turn-helix of insertion element transposase TetR_C_33 PF13305.6 gi|121639094|ref|YP_979318.1| - 0.026 15.3 0.1 0.064 14.0 0.1 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_14 PF17754.1 gi|121639094|ref|YP_979318.1| - 0.031 14.2 0.0 0.067 13.1 0.0 1.7 1 0 0 1 1 1 0 MftR C-terminal domain DUF3107 PF11305.8 gi|121639095|ref|YP_979319.1| - 1.4e-30 105.3 0.0 1.7e-30 105.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3107) Mycobact_memb PF05423.13 gi|121639096|ref|YP_979320.1| - 1.6e-05 24.8 0.4 2.6e-05 24.2 0.4 1.3 1 0 0 1 1 1 1 Mycobacterium membrane protein MiaE_2 PF13794.6 gi|121639097|ref|YP_979321.1| - 6.4e-59 198.8 5.4 8.2e-59 198.4 5.4 1.1 1 0 0 1 1 1 1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like MiaE PF06175.11 gi|121639097|ref|YP_979321.1| - 0.00049 19.8 0.1 0.00065 19.4 0.1 1.2 1 0 0 1 1 1 1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DUF3486 PF11985.8 gi|121639097|ref|YP_979321.1| - 0.0036 17.7 0.4 0.091 13.2 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3486) Ferritin_2 PF13668.6 gi|121639097|ref|YP_979321.1| - 0.07 13.3 0.2 0.35 11.1 0.0 1.8 1 1 1 2 2 2 0 Ferritin-like domain DEAD PF00270.29 gi|121639098|ref|YP_979322.1| - 5.2e-51 172.9 0.0 1.2e-49 168.5 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121639098|ref|YP_979322.1| - 4.6e-29 101.0 0.1 8.3e-29 100.2 0.1 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|121639098|ref|YP_979322.1| - 0.021 14.8 0.0 0.037 14.0 0.0 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|121639098|ref|YP_979322.1| - 0.084 12.2 0.0 0.23 10.8 0.0 1.7 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit UTP25 PF06862.12 gi|121639098|ref|YP_979322.1| - 0.11 11.2 0.0 5.3 5.7 0.0 2.1 2 0 0 2 2 2 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 LytR_C PF13399.6 gi|121639098|ref|YP_979322.1| - 0.12 13.4 0.7 0.6 11.1 0.1 2.4 2 1 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator PQQ_2 PF13360.6 gi|121639099|ref|YP_979323.1| - 0.0001 21.9 12.3 0.00021 21.0 2.5 2.6 1 1 1 2 2 2 2 PQQ-like domain AAA_31 PF13614.6 gi|121639100|ref|YP_979324.1| - 1.2e-54 185.0 0.0 2.8e-54 183.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|121639100|ref|YP_979324.1| - 9.6e-26 90.3 0.0 2e-25 89.3 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|121639100|ref|YP_979324.1| - 4.1e-12 46.1 0.0 5.7e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|121639100|ref|YP_979324.1| - 7.5e-10 38.5 0.2 0.00053 19.3 0.1 2.3 2 0 0 2 2 2 2 ATPase MipZ ArsA_ATPase PF02374.15 gi|121639100|ref|YP_979324.1| - 1.7e-09 37.3 0.0 4.6e-09 35.9 0.0 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase ParA PF10609.9 gi|121639100|ref|YP_979324.1| - 1.4e-08 34.5 0.2 3.8e-08 33.1 0.2 1.8 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|121639100|ref|YP_979324.1| - 1.9e-07 30.8 0.0 1.8e-06 27.6 0.0 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ATP_bind_1 PF03029.17 gi|121639100|ref|YP_979324.1| - 0.0013 18.6 0.0 0.0021 17.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein VirC1 PF07015.11 gi|121639100|ref|YP_979324.1| - 0.0039 16.5 0.1 0.0074 15.6 0.1 1.4 1 0 0 1 1 1 1 VirC1 protein SRP54 PF00448.22 gi|121639100|ref|YP_979324.1| - 0.027 14.1 0.1 0.12 12.0 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|121639100|ref|YP_979324.1| - 0.039 12.9 0.1 0.067 12.2 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|121639100|ref|YP_979324.1| - 0.054 13.3 0.0 0.15 11.9 0.0 1.6 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop His_Phos_1 PF00300.22 gi|121639101|ref|YP_979325.1| - 1e-44 152.6 0.2 1.1e-44 152.4 0.2 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Reo_sigma1 PF01664.16 gi|121639101|ref|YP_979325.1| - 0.033 13.5 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Reovirus viral attachment protein sigma 1 Chorismate_bind PF00425.18 gi|121639102|ref|YP_979326.1| - 9.1e-70 235.2 0.0 1.1e-69 234.9 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Acetyltransf_1 PF00583.25 gi|121639103|ref|YP_979327.1| - 1.1e-10 41.8 0.0 1.3e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|121639103|ref|YP_979327.1| - 6e-08 32.6 0.0 6.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|121639103|ref|YP_979327.1| - 8.9e-06 25.7 0.0 1e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121639103|ref|YP_979327.1| - 3.2e-05 24.3 0.0 4.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|121639103|ref|YP_979327.1| - 0.0065 16.1 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_13 PF13880.6 gi|121639103|ref|YP_979327.1| - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_8 PF13523.6 gi|121639103|ref|YP_979327.1| - 0.035 13.8 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|121639103|ref|YP_979327.1| - 0.079 12.4 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_9 PF13527.7 gi|121639103|ref|YP_979327.1| - 0.1 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SKG6 PF08693.10 gi|121639104|ref|YP_979328.1| - 7 6.1 14.1 0.27 10.7 6.3 2.5 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DAGK_cat PF00781.24 gi|121639105|ref|YP_979329.1| - 2.7e-24 85.2 0.8 4.5e-24 84.5 0.8 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 gi|121639105|ref|YP_979329.1| - 0.0086 15.3 0.2 0.012 14.9 0.2 1.2 1 0 0 1 1 1 1 ATP-NAD kinase Whib PF02467.16 gi|121639106|ref|YP_979330.1| - 8.5e-27 93.5 0.5 1.1e-26 93.2 0.5 1.1 1 0 0 1 1 1 1 Transcription factor WhiB H_kinase_N PF12282.8 gi|121639107|ref|YP_979331.1| - 4.7e-44 149.8 0.3 1.6e-43 148.1 0.0 2.0 2 0 0 2 2 2 1 Signal transduction histidine kinase HisKA_2 PF07568.12 gi|121639107|ref|YP_979331.1| - 5.4e-22 77.7 2.9 1.2e-21 76.6 2.9 1.6 1 0 0 1 1 1 1 Histidine kinase HWE_HK PF07536.14 gi|121639107|ref|YP_979331.1| - 2.2e-08 34.7 1.7 5.5e-08 33.4 1.4 1.9 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c PF02518.26 gi|121639107|ref|YP_979331.1| - 3.4e-08 34.0 0.0 1.1e-07 32.3 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121639107|ref|YP_979331.1| - 5.2e-06 26.4 0.0 1.2e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|121639107|ref|YP_979331.1| - 0.0006 20.1 0.5 0.005 17.1 0.1 2.6 1 1 1 2 2 2 1 PAS fold Biotin_lipoyl PF00364.22 gi|121639108|ref|YP_979332.1| - 3.4e-17 62.0 6.9 3.9e-17 61.8 6.9 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|121639108|ref|YP_979332.1| - 5.5e-07 29.3 9.8 3.9e-05 23.4 1.0 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|121639108|ref|YP_979332.1| - 8.2e-05 23.3 4.1 0.0038 17.9 0.6 2.0 2 0 0 2 2 2 2 HlyD family secretion protein RnfC_N PF13375.6 gi|121639108|ref|YP_979332.1| - 0.00051 20.0 2.5 0.0039 17.1 0.6 2.0 1 1 1 2 2 2 2 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|121639108|ref|YP_979332.1| - 0.0011 18.2 2.2 0.038 13.2 0.2 2.0 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Peptidase_M23 PF01551.22 gi|121639108|ref|YP_979332.1| - 0.0045 17.2 2.5 0.79 10.0 0.3 2.4 1 1 2 3 3 3 2 Peptidase family M23 GCV_H PF01597.19 gi|121639108|ref|YP_979332.1| - 0.01 15.7 1.3 0.011 15.6 1.3 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF2118 PF09891.9 gi|121639108|ref|YP_979332.1| - 0.012 15.6 0.5 0.66 9.9 0.1 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2118) NQRA PF05896.11 gi|121639108|ref|YP_979332.1| - 0.021 14.3 0.8 0.035 13.5 0.7 1.4 1 1 1 2 2 2 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PYNP_C PF07831.13 gi|121639108|ref|YP_979332.1| - 0.029 14.0 1.6 3.6 7.3 0.1 2.2 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain zf-HC2 PF13490.6 gi|121639109|ref|YP_979333.1| - 6.7e-10 39.0 4.2 6.7e-10 39.0 4.2 1.8 2 0 0 2 2 2 1 Putative zinc-finger Sigma70_r2 PF04542.14 gi|121639111|ref|YP_979335.1| - 7.2e-18 64.1 0.1 1.5e-17 63.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639111|ref|YP_979335.1| - 1.1e-16 60.2 0.0 2.5e-16 59.1 0.0 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|121639111|ref|YP_979335.1| - 1.8e-10 40.2 0.0 4.4e-10 38.9 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 adh_short PF00106.25 gi|121639112|ref|YP_979336.1| - 1e-28 100.1 0.0 1.5e-28 99.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639112|ref|YP_979336.1| - 7e-28 97.8 0.2 9.6e-28 97.3 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121639112|ref|YP_979336.1| - 1.2e-07 31.8 0.1 1.8e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 KR domain DFP PF04127.15 gi|121639112|ref|YP_979336.1| - 0.036 13.9 0.1 0.065 13.0 0.1 1.4 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NAD_binding_10 PF13460.6 gi|121639112|ref|YP_979336.1| - 0.099 12.5 0.9 0.26 11.2 1.0 1.7 1 1 0 1 1 1 0 NAD(P)H-binding tRNA_edit PF04073.15 gi|121639114|ref|YP_979338.1| - 1.4e-06 28.4 0.0 1.7e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain APH PF01636.23 gi|121639115|ref|YP_979339.1| - 9.4e-33 114.1 2.6 9.4e-33 114.1 2.6 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Acetyltransf_3 PF13302.7 gi|121639115|ref|YP_979339.1| - 2.7e-18 67.0 0.0 6.1e-18 65.8 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121639115|ref|YP_979339.1| - 8.7e-08 32.4 0.0 1.7e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 gi|121639115|ref|YP_979339.1| - 0.0097 15.6 0.0 0.048 13.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121639115|ref|YP_979339.1| - 0.0097 15.8 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121639115|ref|YP_979339.1| - 0.059 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 FR47-like protein RIO1 PF01163.22 gi|121639115|ref|YP_979339.1| - 0.084 12.5 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 RIO1 family SRAP PF02586.14 gi|121639116|ref|YP_979340.1| - 5.6e-65 218.9 0.0 6.4e-65 218.8 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) EPSP_synthase PF00275.20 gi|121639117|ref|YP_979341.1| - 3.1e-120 401.7 0.0 3.5e-120 401.5 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RsgA_GTPase PF03193.16 gi|121639118|ref|YP_979342.1| - 9.4e-41 139.5 0.0 1.3e-40 139.1 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|121639118|ref|YP_979342.1| - 6.8e-06 26.1 0.0 1.3e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|121639118|ref|YP_979342.1| - 2.8e-05 24.6 0.1 5.2e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|121639118|ref|YP_979342.1| - 0.00034 21.0 0.6 0.0011 19.3 0.2 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|121639118|ref|YP_979342.1| - 0.0047 16.6 0.0 0.0091 15.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|121639118|ref|YP_979342.1| - 0.0068 16.7 0.1 0.013 15.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain GTP_EFTU PF00009.27 gi|121639118|ref|YP_979342.1| - 0.01 15.4 0.1 0.95 9.0 0.1 2.7 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 gi|121639118|ref|YP_979342.1| - 0.027 14.6 0.3 0.074 13.2 0.1 1.8 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|121639118|ref|YP_979342.1| - 0.028 14.6 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NACHT PF05729.12 gi|121639118|ref|YP_979342.1| - 0.087 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain cobW PF02492.19 gi|121639118|ref|YP_979342.1| - 0.1 12.2 0.0 0.89 9.1 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Ras PF00071.22 gi|121639118|ref|YP_979342.1| - 0.12 12.0 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Ras family AIG1 PF04548.16 gi|121639118|ref|YP_979342.1| - 0.16 11.3 0.2 0.37 10.1 0.1 1.6 2 1 0 2 2 2 0 AIG1 family MobB PF03205.14 gi|121639118|ref|YP_979342.1| - 0.17 11.8 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B HNH_repeat PF18780.1 gi|121639118|ref|YP_979342.1| - 0.21 11.4 0.1 0.51 10.2 0.1 1.6 1 0 0 1 1 1 0 Homing endonuclease repeat RNA_helicase PF00910.22 gi|121639118|ref|YP_979342.1| - 0.24 11.8 0.0 0.41 11.1 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Septin PF00735.18 gi|121639118|ref|YP_979342.1| - 0.3 10.3 0.0 0.43 9.8 0.0 1.2 1 0 0 1 1 1 0 Septin FA_desaturase PF00487.24 gi|121639119|ref|YP_979343.1| - 3.2e-37 128.7 5.2 4.5e-37 128.3 5.2 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Chlorovi_GP_rpt PF06598.11 gi|121639119|ref|YP_979343.1| - 0.069 13.2 0.7 0.15 12.1 0.7 1.5 1 0 0 1 1 1 0 Chlorovirus glycoprotein repeat Fer2 PF00111.27 gi|121639120|ref|YP_979344.1| - 2.6e-10 40.1 0.5 4.5e-10 39.3 0.5 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 gi|121639120|ref|YP_979344.1| - 1.1e-09 38.5 0.0 1.9e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|121639120|ref|YP_979344.1| - 1.7e-08 35.1 0.0 3.2e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 gi|121639120|ref|YP_979344.1| - 0.053 13.6 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Ferric reductase NAD binding domain MlrC_C PF07171.12 gi|121639120|ref|YP_979344.1| - 0.3 11.2 1.6 1.3 9.2 0.1 2.4 2 1 1 3 3 3 0 MlrC C-terminus PPK2 PF03976.14 gi|121639122|ref|YP_979346.1| - 4.3e-111 369.9 0.4 5e-111 369.7 0.4 1.0 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) CutA1 PF03091.15 gi|121639122|ref|YP_979346.1| - 0.072 13.0 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein WES_acyltransf PF03007.16 gi|121639123|ref|YP_979347.1| - 5.6e-89 298.4 0.9 7.7e-89 297.9 0.9 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639123|ref|YP_979347.1| - 2.5e-19 69.7 0.1 4e-19 69.0 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Na_H_Exchanger PF00999.21 gi|121639125|ref|YP_979349.1| - 5.9e-40 137.2 40.0 7.5e-40 136.9 40.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_C PF02080.21 gi|121639126|ref|YP_979350.1| - 1.1e-15 57.2 1.0 1.1e-15 57.2 1.0 1.9 2 0 0 2 2 2 1 TrkA-C domain NnrU PF07298.11 gi|121639127|ref|YP_979351.1| - 6e-06 25.9 12.9 6e-06 25.9 12.9 1.5 2 0 0 2 2 2 1 NnrU protein PEMT PF04191.13 gi|121639127|ref|YP_979351.1| - 0.002 18.5 3.4 0.002 18.5 3.4 2.5 3 1 0 3 3 3 1 Phospholipid methyltransferase Lamprin PF06403.11 gi|121639127|ref|YP_979351.1| - 0.0082 16.1 1.1 0.0082 16.1 1.1 1.7 2 1 0 2 2 2 1 Lamprin ICMT PF04140.14 gi|121639127|ref|YP_979351.1| - 0.026 15.0 0.2 0.088 13.2 0.2 1.9 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SpoIIM PF01944.17 gi|121639127|ref|YP_979351.1| - 3.3 7.7 10.8 0.5 10.4 5.3 2.3 2 1 0 2 2 2 0 Stage II sporulation protein M MFS_1 PF07690.16 gi|121639128|ref|YP_979352.1| - 6.6e-44 150.3 57.4 1.1e-35 123.3 41.5 3.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Patatin PF01734.22 gi|121639128|ref|YP_979352.1| - 4.5e-22 79.2 3.1 3.5e-20 73.1 3.1 2.5 1 1 0 1 1 1 1 Patatin-like phospholipase cNMP_binding PF00027.29 gi|121639128|ref|YP_979352.1| - 6.3e-20 71.0 0.0 1.3e-19 70.1 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MFS_3 PF05977.13 gi|121639128|ref|YP_979352.1| - 1.5e-07 30.3 10.9 1.5e-07 30.3 10.9 2.6 3 0 0 3 3 3 1 Transmembrane secretion effector Sugar_tr PF00083.24 gi|121639128|ref|YP_979352.1| - 0.00042 19.3 10.2 0.00042 19.3 10.2 3.2 2 1 1 3 3 3 1 Sugar (and other) transporter SecA_DEAD PF07517.14 gi|121639129|ref|YP_979353.1| - 5.2e-126 419.8 0.2 9.3e-126 419.0 0.2 1.4 1 0 0 1 1 1 1 SecA DEAD-like domain SecA_SW PF07516.13 gi|121639129|ref|YP_979353.1| - 3.8e-67 226.2 4.8 5.7e-67 225.6 4.0 1.7 2 0 0 2 2 2 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 gi|121639129|ref|YP_979353.1| - 6.1e-36 123.5 0.4 2.6e-35 121.4 0.1 2.4 2 0 0 2 2 2 1 SecA preprotein cross-linking domain DEAD PF00270.29 gi|121639129|ref|YP_979353.1| - 0.0089 15.8 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Lge1 PF11488.8 gi|121639129|ref|YP_979353.1| - 0.12 12.6 0.4 0.34 11.1 0.4 1.8 1 0 0 1 1 1 0 Transcriptional regulatory protein LGE1 Ribosom_S30AE_C PF16321.5 gi|121639130|ref|YP_979354.1| - 4.8e-26 90.2 0.1 1.1e-25 89.0 0.1 1.7 1 0 0 1 1 1 1 Sigma 54 modulation/S30EA ribosomal protein C terminus Ribosomal_S30AE PF02482.19 gi|121639130|ref|YP_979354.1| - 1e-18 67.9 0.3 2.1e-18 66.9 0.2 1.6 2 0 0 2 2 2 1 Sigma 54 modulation protein / S30EA ribosomal protein FecR PF04773.13 gi|121639130|ref|YP_979354.1| - 0.11 13.1 0.0 0.28 11.9 0.0 1.6 1 0 0 1 1 1 0 FecR protein Pribosyltran PF00156.27 gi|121639131|ref|YP_979355.1| - 0.00018 21.1 0.2 0.00026 20.5 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121639131|ref|YP_979355.1| - 0.00047 19.6 0.0 0.00075 19.0 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|121639131|ref|YP_979355.1| - 0.0016 18.0 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase zf-NADH-PPase PF09297.11 gi|121639131|ref|YP_979355.1| - 0.4 10.4 6.1 0.72 9.6 0.1 2.5 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_S11 PF00411.19 gi|121639131|ref|YP_979355.1| - 1.2 9.5 4.7 11 6.5 0.6 2.5 1 1 0 2 2 2 0 Ribosomal protein S11 DUF2993 PF11209.8 gi|121639132|ref|YP_979356.1| - 5.1e-06 26.9 3.5 1.3e-05 25.5 3.5 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2993) Gmad1 PF10647.9 gi|121639133|ref|YP_979357.1| - 1e-69 235.1 16.0 1.5e-69 234.5 16.0 1.3 1 0 0 1 1 1 1 Lipoprotein LpqB beta-propeller domain Germane PF10646.9 gi|121639133|ref|YP_979357.1| - 6.6e-13 49.3 0.0 1.9e-12 47.9 0.0 1.8 1 0 0 1 1 1 1 Sporulation and spore germination HATPase_c PF02518.26 gi|121639134|ref|YP_979358.1| - 3.9e-20 72.4 0.0 9.6e-20 71.2 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121639134|ref|YP_979358.1| - 1.4e-16 60.3 6.1 2.6e-16 59.4 1.1 2.8 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121639134|ref|YP_979358.1| - 1e-11 45.0 0.4 3.3e-11 43.4 0.4 2.0 1 0 0 1 1 1 1 HAMP domain HATPase_c_2 PF13581.6 gi|121639134|ref|YP_979358.1| - 9.5e-05 22.4 0.1 0.00037 20.5 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain DUF1472 PF07339.12 gi|121639134|ref|YP_979358.1| - 0.17 12.4 3.3 1 9.9 0.0 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF1472) Response_reg PF00072.24 gi|121639135|ref|YP_979359.1| - 1.8e-29 102.1 0.2 3.4e-29 101.3 0.2 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121639135|ref|YP_979359.1| - 2.4e-26 91.6 0.5 8.8e-26 89.8 0.1 2.0 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 gi|121639135|ref|YP_979359.1| - 0.095 13.1 0.0 0.27 11.6 0.0 1.7 2 0 0 2 2 2 0 Flagellar regulatory protein FleQ B12-binding PF02310.19 gi|121639135|ref|YP_979359.1| - 0.11 12.5 0.0 0.27 11.3 0.0 1.7 1 1 0 1 1 1 0 B12 binding domain TAL_effector PF03377.13 gi|121639135|ref|YP_979359.1| - 0.13 12.6 0.2 0.38 11.1 0.1 1.8 2 0 0 2 2 2 0 TAL effector repeat Thymidylate_kin PF02223.17 gi|121639136|ref|YP_979360.1| - 3.2e-22 79.1 0.0 4.1e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 gi|121639136|ref|YP_979360.1| - 2.1e-05 24.8 0.4 2.7e-05 24.5 0.4 1.2 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|121639136|ref|YP_979360.1| - 0.0004 19.5 0.4 0.0006 18.9 0.4 1.4 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|121639136|ref|YP_979360.1| - 0.0023 18.5 0.0 0.0057 17.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|121639136|ref|YP_979360.1| - 0.06 13.2 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase MobB PF03205.14 gi|121639136|ref|YP_979360.1| - 0.066 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF2075 PF09848.9 gi|121639136|ref|YP_979360.1| - 0.086 12.1 0.0 0.35 10.0 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) SRP54 PF00448.22 gi|121639136|ref|YP_979360.1| - 0.099 12.3 0.2 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 gi|121639136|ref|YP_979360.1| - 0.1 12.7 0.3 0.22 11.6 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|121639136|ref|YP_979360.1| - 0.12 12.1 4.7 0.025 14.3 1.5 1.6 2 1 0 2 2 2 0 AAA domain AdoHcyase PF05221.17 gi|121639137|ref|YP_979361.1| - 7.7e-149 494.8 0.0 8.7e-149 494.6 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|121639137|ref|YP_979361.1| - 1.4e-78 262.6 3.1 1.9e-78 262.1 3.1 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|121639137|ref|YP_979361.1| - 3.6e-10 39.5 0.3 6.7e-10 38.6 0.3 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|121639137|ref|YP_979361.1| - 7.4e-08 32.1 0.5 1.3e-07 31.4 0.5 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|121639137|ref|YP_979361.1| - 5.9e-05 23.3 1.1 0.00049 20.3 1.1 2.2 1 1 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 gi|121639137|ref|YP_979361.1| - 0.00014 22.2 0.1 0.00035 21.0 0.1 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|121639137|ref|YP_979361.1| - 0.00055 20.0 0.2 0.0012 18.9 0.2 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 gi|121639137|ref|YP_979361.1| - 0.013 14.9 1.2 0.14 11.5 1.2 2.2 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XdhC_C PF13478.6 gi|121639137|ref|YP_979361.1| - 0.02 15.4 0.5 0.041 14.4 0.1 1.7 2 0 0 2 2 2 0 XdhC Rossmann domain F420_oxidored PF03807.17 gi|121639137|ref|YP_979361.1| - 0.03 14.9 0.6 0.069 13.7 0.6 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|121639137|ref|YP_979361.1| - 0.075 12.3 2.0 0.17 11.1 2.0 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain RNase_PH_C PF03725.15 gi|121639137|ref|YP_979361.1| - 0.12 12.5 0.1 0.32 11.1 0.1 1.7 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 Gp_dh_N PF00044.24 gi|121639137|ref|YP_979361.1| - 0.16 12.3 0.4 0.37 11.2 0.4 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TetR_C_35 PF18556.1 gi|121639138|ref|YP_979362.1| - 7.4e-35 119.3 0.3 1.4e-34 118.3 0.3 1.5 1 0 0 1 1 1 1 Bacterial Tetracyclin repressor, C-terminal domain TetR_N PF00440.23 gi|121639138|ref|YP_979362.1| - 1.5e-09 37.5 0.0 3.2e-09 36.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 gi|121639138|ref|YP_979362.1| - 0.016 15.0 0.2 0.041 13.7 0.1 1.8 1 1 0 1 1 1 0 Homeodomain-like domain LacI PF00356.21 gi|121639138|ref|YP_979362.1| - 0.02 14.7 0.1 0.074 12.9 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_7 PF02796.15 gi|121639138|ref|YP_979362.1| - 0.024 14.7 0.1 0.046 13.8 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_Tnp_1_2 PF13022.6 gi|121639138|ref|YP_979362.1| - 0.039 14.1 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase HTH_3 PF01381.22 gi|121639138|ref|YP_979362.1| - 0.067 13.3 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix Rubredoxin PF00301.20 gi|121639139|ref|YP_979363.1| - 2.3e-22 78.7 3.4 2.7e-22 78.5 3.4 1.0 1 0 0 1 1 1 1 Rubredoxin Rubredoxin_2 PF18073.1 gi|121639139|ref|YP_979363.1| - 0.012 15.3 6.2 0.29 10.9 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain OrfB_Zn_ribbon PF07282.11 gi|121639139|ref|YP_979363.1| - 0.027 14.4 0.2 3.6 7.6 0.1 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-RanBP PF00641.18 gi|121639139|ref|YP_979363.1| - 0.033 13.5 2.3 1 8.7 0.6 2.3 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Zn-ribbon_8 PF09723.10 gi|121639139|ref|YP_979363.1| - 0.043 13.9 3.7 0.24 11.6 3.7 1.9 1 1 0 1 1 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|121639139|ref|YP_979363.1| - 0.052 13.3 0.9 3.4 7.5 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|121639139|ref|YP_979363.1| - 0.064 13.0 1.7 4.8 7.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|121639139|ref|YP_979363.1| - 0.066 13.0 0.3 5.2 6.9 0.0 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein HypA PF01155.19 gi|121639139|ref|YP_979363.1| - 0.07 13.1 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|121639139|ref|YP_979363.1| - 0.076 12.6 0.7 1.4 8.6 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger PHD_4 PF16866.5 gi|121639139|ref|YP_979363.1| - 0.69 10.0 5.2 1.7 8.8 5.2 1.7 1 1 0 1 1 1 0 PHD-finger Rubredoxin PF00301.20 gi|121639140|ref|YP_979364.1| - 3.1e-21 75.1 7.9 3.4e-21 75.0 7.9 1.0 1 0 0 1 1 1 1 Rubredoxin zf-H2C2_2 PF13465.6 gi|121639140|ref|YP_979364.1| - 0.075 13.5 5.2 0.45 11.0 0.3 2.1 2 0 0 2 2 2 0 Zinc-finger double domain Zn_ribbon_SprT PF17283.2 gi|121639140|ref|YP_979364.1| - 1.3 9.0 7.7 4.6 7.2 1.2 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain FA_desaturase PF00487.24 gi|121639141|ref|YP_979365.1| - 1.7e-34 119.8 9.8 1.7e-34 119.8 9.8 2.6 2 2 1 3 3 3 1 Fatty acid desaturase AA_permease_2 PF13520.6 gi|121639142|ref|YP_979366.1| - 2.9e-56 191.1 44.8 3.5e-56 190.9 44.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|121639142|ref|YP_979366.1| - 5.9e-40 137.3 39.1 7.3e-40 137.0 39.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_C PF13906.6 gi|121639142|ref|YP_979366.1| - 3e-18 65.6 3.8 3e-18 65.6 3.8 4.3 5 0 0 5 5 5 1 C-terminus of AA_permease PrgI PF12666.7 gi|121639142|ref|YP_979366.1| - 0.053 14.2 1.2 0.053 14.2 1.2 5.4 4 3 0 4 4 4 0 PrgI family protein DAO PF01266.24 gi|121639143|ref|YP_979367.1| - 6.6e-05 22.6 0.0 0.25 10.9 0.0 2.3 1 1 1 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|121639143|ref|YP_979367.1| - 0.0014 17.6 0.0 0.27 10.1 0.0 2.8 3 0 0 3 3 3 2 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|121639143|ref|YP_979367.1| - 0.0088 15.3 0.0 0.14 11.3 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|121639143|ref|YP_979367.1| - 0.014 15.6 0.0 0.033 14.4 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|121639143|ref|YP_979367.1| - 0.02 14.0 0.1 0.37 9.8 0.0 2.6 3 0 0 3 3 3 0 FAD binding domain Glft2_N PF17994.1 gi|121639143|ref|YP_979367.1| - 0.055 13.4 0.0 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 Galactofuranosyltransferase 2 N-terminal Pyr_redox_2 PF07992.14 gi|121639143|ref|YP_979367.1| - 0.061 12.5 0.0 0.15 11.2 0.0 1.7 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121639143|ref|YP_979367.1| - 0.11 11.8 0.0 5.9 6.1 0.0 2.4 3 0 0 3 3 3 0 Thi4 family PMI_typeI PF01238.21 gi|121639144|ref|YP_979368.1| - 2.6e-59 201.3 0.0 4.4e-59 200.6 0.0 1.3 1 1 0 1 1 1 1 Phosphomannose isomerase type I AraC_binding PF02311.19 gi|121639144|ref|YP_979368.1| - 0.017 15.0 0.1 3.4 7.6 0.1 2.6 2 0 0 2 2 2 0 AraC-like ligand binding domain Cupin_2 PF07883.11 gi|121639144|ref|YP_979368.1| - 0.043 13.5 0.0 3.8 7.3 0.0 2.6 2 0 0 2 2 2 0 Cupin domain PGM_PMM_I PF02878.16 gi|121639146|ref|YP_979370.1| - 3.7e-31 107.7 0.0 6.9e-31 106.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|121639146|ref|YP_979370.1| - 3.7e-26 91.6 0.1 1.1e-25 90.1 0.0 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|121639146|ref|YP_979370.1| - 3.6e-23 82.1 0.1 1.6e-22 80.1 0.1 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|121639146|ref|YP_979370.1| - 7e-10 39.0 0.0 1.5e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF3499 PF12005.8 gi|121639147|ref|YP_979371.1| - 8.5e-48 162.1 0.0 1.2e-47 161.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3499) Zincin_1 PF06262.11 gi|121639148|ref|YP_979372.1| - 1.2e-06 28.5 0.1 2.1e-06 27.8 0.1 1.5 1 1 0 1 1 1 1 Zincin-like metallopeptidase Whib PF02467.16 gi|121639149|ref|YP_979373.1| - 2.2e-27 95.4 2.4 2.6e-27 95.2 2.4 1.1 1 0 0 1 1 1 1 Transcription factor WhiB UPF0052 PF01933.18 gi|121639150|ref|YP_979374.1| - 2.6e-63 214.0 0.0 3.1e-63 213.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 AIMP2_LysRS_bd PF16780.5 gi|121639150|ref|YP_979374.1| - 0.11 12.2 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain F420_ligase PF01996.16 gi|121639151|ref|YP_979375.1| - 9.5e-43 146.3 0.3 9.4e-40 136.5 0.3 2.1 1 1 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Nitroreductase PF00881.24 gi|121639151|ref|YP_979375.1| - 1e-26 94.0 0.0 2e-26 93.1 0.0 1.5 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121639151|ref|YP_979375.1| - 0.00021 20.9 0.0 0.008 15.8 0.0 2.2 2 0 0 2 2 2 1 Putative TM nitroreductase N6_Mtase PF02384.16 gi|121639152|ref|YP_979376.1| - 4.3e-07 29.5 0.0 0.0006 19.2 0.0 2.1 1 1 1 2 2 2 2 N-6 DNA Methylase Eco57I PF07669.11 gi|121639152|ref|YP_979376.1| - 0.016 15.7 0.0 0.031 14.8 0.0 1.4 1 0 0 1 1 1 0 Eco57I restriction-modification methylase NTP_transferase PF00483.23 gi|121639153|ref|YP_979377.1| - 7e-43 147.0 0.0 9.2e-43 146.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|121639153|ref|YP_979377.1| - 4.8e-12 46.5 0.1 6e-12 46.2 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|121639153|ref|YP_979377.1| - 1.2e-09 37.5 10.7 0.0011 18.6 0.6 4.0 1 1 2 3 3 3 3 Bacterial transferase hexapeptide (six repeats) DUF4954 PF16314.5 gi|121639153|ref|YP_979377.1| - 0.041 12.0 0.1 0.055 11.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 gi|121639153|ref|YP_979377.1| - 0.22 11.3 13.1 3.1 7.6 1.5 3.9 2 1 1 3 3 3 0 Hexapeptide repeat of succinyl-transferase Queuosine_synth PF02547.15 gi|121639153|ref|YP_979377.1| - 0.3 10.2 0.0 1 8.4 0.0 1.6 2 0 0 2 2 2 0 Queuosine biosynthesis protein Glyco_tranf_2_3 PF13641.6 gi|121639154|ref|YP_979378.1| - 4.4e-13 49.6 0.0 1.2e-12 48.3 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|121639154|ref|YP_979378.1| - 6.9e-13 48.8 0.0 1.2e-12 48.0 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|121639154|ref|YP_979378.1| - 5.4e-06 26.4 0.4 8.2e-06 25.9 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|121639154|ref|YP_979378.1| - 0.0002 20.9 0.0 0.0003 20.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|121639154|ref|YP_979378.1| - 0.0012 18.3 0.0 0.0025 17.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_transf_7C PF02709.14 gi|121639154|ref|YP_979378.1| - 0.0075 15.9 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_tranf_2_4 PF13704.6 gi|121639154|ref|YP_979378.1| - 0.01 16.3 0.0 0.039 14.5 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferase family 2 RmlD_sub_bind PF04321.17 gi|121639155|ref|YP_979379.1| - 1.2e-109 365.9 0.4 1.3e-109 365.7 0.4 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|121639155|ref|YP_979379.1| - 5.4e-24 85.0 0.3 8.1e-24 84.4 0.3 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|121639155|ref|YP_979379.1| - 1.7e-12 47.4 0.3 1.1e-09 38.2 0.0 2.3 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121639155|ref|YP_979379.1| - 3.6e-12 45.9 0.0 2.5e-11 43.1 0.0 1.9 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|121639155|ref|YP_979379.1| - 4e-12 45.9 0.3 8.1e-11 41.6 0.0 2.1 1 1 1 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|121639155|ref|YP_979379.1| - 5.7e-08 32.2 2.5 5.4e-05 22.5 0.1 3.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|121639155|ref|YP_979379.1| - 0.00054 19.9 6.6 0.018 14.9 6.3 2.4 1 1 0 1 1 1 1 NAD(P)H-binding PGM_PMM_II PF02879.16 gi|121639155|ref|YP_979379.1| - 0.00089 19.8 0.0 1.7 9.3 0.0 2.5 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Sacchrp_dh_NADP PF03435.18 gi|121639155|ref|YP_979379.1| - 0.0073 16.6 0.1 0.063 13.5 0.0 2.3 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain KR PF08659.10 gi|121639155|ref|YP_979379.1| - 0.0093 15.9 0.7 0.018 15.0 0.2 1.7 2 0 0 2 2 2 1 KR domain LytR_cpsA_psr PF03816.14 gi|121639156|ref|YP_979380.1| - 1.6e-44 151.7 0.0 3.3e-44 150.7 0.0 1.5 2 0 0 2 2 2 1 Cell envelope-related transcriptional attenuator domain LytR_C PF13399.6 gi|121639156|ref|YP_979380.1| - 8e-13 49.2 3.2 8e-13 49.2 3.2 2.4 2 0 0 2 2 2 1 LytR cell envelope-related transcriptional attenuator POTRA_2 PF08479.11 gi|121639156|ref|YP_979380.1| - 0.076 12.9 0.0 0.27 11.1 0.0 1.9 1 0 0 1 1 1 0 POTRA domain, ShlB-type AMP-binding PF00501.28 gi|121639157|ref|YP_979381.1| - 1.4e-05 23.9 0.1 0.00069 18.3 0.1 2.1 2 0 0 2 2 2 2 AMP-binding enzyme DUF1490 PF07371.12 gi|121639158|ref|YP_979382.1| - 3.9e-42 142.2 6.8 4.3e-42 142.1 6.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1490) Ribosomal_60s PF00428.19 gi|121639158|ref|YP_979382.1| - 0.76 10.4 7.7 1.2 9.8 7.5 1.5 1 1 0 1 1 1 0 60s Acidic ribosomal protein Hydrolase PF00702.26 gi|121639159|ref|YP_979383.1| - 1.2e-45 156.4 0.2 2.3e-45 155.5 0.2 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 gi|121639159|ref|YP_979383.1| - 3.1e-40 137.6 4.5 6.3e-40 136.6 4.5 1.5 1 0 0 1 1 1 1 E1-E2 ATPase HAD PF12710.7 gi|121639159|ref|YP_979383.1| - 1.3e-05 25.7 0.1 4.1e-05 24.1 0.1 1.9 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121639159|ref|YP_979383.1| - 0.00054 19.8 1.0 0.24 11.1 0.9 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_efflux PF01545.21 gi|121639160|ref|YP_979384.1| - 6.6e-10 39.1 6.8 4.5e-09 36.3 6.8 1.9 1 1 0 1 1 1 1 Cation efflux family CoA_transf_3 PF02515.17 gi|121639161|ref|YP_979385.1| - 4e-121 404.6 1.1 4.4e-121 404.4 1.1 1.0 1 0 0 1 1 1 1 CoA-transferase family III Sulfate_transp PF00916.20 gi|121639162|ref|YP_979386.1| - 3.8e-85 285.9 28.2 3.8e-85 285.9 28.2 1.7 2 0 0 2 2 2 1 Sulfate permease family Pro_CA PF00484.19 gi|121639162|ref|YP_979386.1| - 9.1e-41 139.7 0.0 1.4e-40 139.1 0.0 1.3 1 0 0 1 1 1 1 Carbonic anhydrase Acyl-CoA_dh_1 PF00441.24 gi|121639163|ref|YP_979387.1| - 7.4e-50 169.1 2.3 1.3e-49 168.3 2.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639163|ref|YP_979387.1| - 2e-30 104.9 0.1 7.4e-30 103.0 0.1 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121639163|ref|YP_979387.1| - 4.4e-29 101.4 0.2 8.9e-29 100.4 0.2 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639163|ref|YP_979387.1| - 8.9e-27 94.0 2.6 8.9e-27 94.0 2.6 2.2 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB PF03241.13 gi|121639163|ref|YP_979387.1| - 0.0059 15.7 0.1 0.013 14.6 0.1 1.5 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal AIRC PF00731.20 gi|121639164|ref|YP_979388.1| - 5.9e-65 217.4 1.6 6.9e-65 217.2 1.6 1.1 1 0 0 1 1 1 1 AIR carboxylase ATP-grasp PF02222.22 gi|121639165|ref|YP_979389.1| - 4.2e-57 192.5 0.0 5.6e-57 192.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|121639165|ref|YP_979389.1| - 1.6e-16 59.7 0.0 3.5e-16 58.6 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPSase_L_D2 PF02786.17 gi|121639165|ref|YP_979389.1| - 3.9e-08 33.0 0.1 8.6e-08 31.9 0.0 1.6 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.19 gi|121639165|ref|YP_979389.1| - 2.7e-05 24.0 0.0 5e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 gi|121639165|ref|YP_979389.1| - 0.00014 21.6 0.0 0.0024 17.5 0.0 2.1 2 0 0 2 2 2 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|121639165|ref|YP_979389.1| - 0.008 15.7 0.0 0.26 10.8 0.0 2.1 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_2 PF08442.10 gi|121639165|ref|YP_979389.1| - 0.02 14.4 0.1 0.045 13.3 0.1 1.5 1 1 0 1 1 1 0 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|121639165|ref|YP_979389.1| - 0.17 11.9 0.0 0.6 10.1 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain GtrA PF04138.14 gi|121639166|ref|YP_979390.1| - 2.6e-22 79.3 5.9 2.6e-22 79.3 5.9 1.8 2 0 0 2 2 2 1 GtrA-like protein DUF4229 PF14012.6 gi|121639166|ref|YP_979390.1| - 1.4 9.1 0.0 1.4 9.1 0.0 3.4 4 1 0 4 4 4 0 Protein of unknown function (DUF4229) bPH_2 PF03703.14 gi|121639167|ref|YP_979391.1| - 2.1e-19 69.5 0.3 3e-19 69.0 0.3 1.3 1 0 0 1 1 1 1 Bacterial PH domain bPH_3 PF14470.6 gi|121639167|ref|YP_979391.1| - 0.0013 19.1 0.0 0.0086 16.4 0.0 2.0 2 0 0 2 2 2 1 Bacterial PH domain DUF2070 PF09843.9 gi|121639167|ref|YP_979391.1| - 0.069 11.4 0.7 0.088 11.1 0.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) BPL_C PF02237.17 gi|121639168|ref|YP_979392.1| - 1.7e-12 47.0 2.0 3.2e-12 46.1 2.0 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB PF03099.19 gi|121639168|ref|YP_979392.1| - 8.4e-05 22.5 0.0 0.00015 21.6 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DraK_HK_N PF18092.1 gi|121639168|ref|YP_979392.1| - 0.14 12.6 2.5 0.24 11.9 0.2 2.4 2 1 0 2 2 2 0 DraK Histidine Kinase N-terminal domain Cupin_2 PF07883.11 gi|121639168|ref|YP_979392.1| - 0.15 11.8 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Cupin domain Carboxyl_trans PF01039.22 gi|121639169|ref|YP_979393.1| - 2e-200 666.7 0.1 2.3e-200 666.5 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|121639169|ref|YP_979393.1| - 0.021 14.3 1.3 0.031 13.8 0.1 1.9 2 1 0 2 2 2 0 Malonate decarboxylase gamma subunit (MdcE) Myosin_tail_1 PF01576.19 gi|121639169|ref|YP_979393.1| - 0.27 9.0 0.1 0.47 8.2 0.1 1.2 1 0 0 1 1 1 0 Myosin tail ACC_epsilon PF13822.6 gi|121639170|ref|YP_979394.1| - 1.3e-14 54.6 0.0 3e-14 53.4 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA carboxylase epsilon subunit Maf PF02545.14 gi|121639171|ref|YP_979395.1| - 2.5e-40 138.1 0.0 2.8e-40 137.9 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein DprA_WH PF17782.1 gi|121639171|ref|YP_979395.1| - 0.00025 21.1 3.8 0.0049 17.0 0.9 2.4 2 0 0 2 2 2 2 DprA winged helix domain CTP_transf_1 PF01148.20 gi|121639171|ref|YP_979395.1| - 0.025 14.3 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase family Rhodanese PF00581.20 gi|121639172|ref|YP_979396.1| - 9.8e-34 116.1 0.0 8.5e-17 61.6 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain SufE PF02657.15 gi|121639173|ref|YP_979397.1| - 1.9e-29 102.0 0.0 2.1e-29 101.8 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain DUF4473 PF14747.6 gi|121639173|ref|YP_979397.1| - 0.1 13.2 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) SsgA PF04686.12 gi|121639173|ref|YP_979397.1| - 0.11 12.5 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA CPSase_L_D2 PF02786.17 gi|121639174|ref|YP_979398.1| - 4e-78 261.7 0.0 6.1e-78 261.1 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|121639174|ref|YP_979398.1| - 1.3e-43 148.1 0.5 5e-43 146.1 0.1 2.2 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|121639174|ref|YP_979398.1| - 2.3e-37 127.4 0.0 8.1e-37 125.6 0.0 2.0 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 gi|121639174|ref|YP_979398.1| - 8.2e-18 64.0 3.4 2.5e-17 62.5 3.4 1.9 1 0 0 1 1 1 1 Biotin-requiring enzyme ATP-grasp PF02222.22 gi|121639174|ref|YP_979398.1| - 1.4e-09 37.8 0.2 7.6e-09 35.4 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 gi|121639174|ref|YP_979398.1| - 2.9e-08 33.4 1.5 0.00063 19.5 0.2 2.7 1 1 1 2 2 2 2 Biotin-lipoyl like Dala_Dala_lig_C PF07478.13 gi|121639174|ref|YP_979398.1| - 1.1e-05 25.1 0.0 2.3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus HlyD_3 PF13437.6 gi|121639174|ref|YP_979398.1| - 0.001 19.8 1.8 1.5 9.6 0.1 3.1 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|121639174|ref|YP_979398.1| - 0.001 18.3 2.1 0.41 9.8 0.2 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF2190 PF09956.9 gi|121639174|ref|YP_979398.1| - 0.0019 18.6 3.2 0.0055 17.2 3.2 1.8 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2190) ATPgrasp_ST PF14397.6 gi|121639174|ref|YP_979398.1| - 0.079 12.2 0.0 0.23 10.7 0.0 1.7 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp LAL_C2 PF18603.1 gi|121639174|ref|YP_979398.1| - 0.092 12.9 2.9 0.29 11.3 0.1 3.0 3 0 0 3 3 3 0 L-amino acid ligase C-terminal domain 2 Peptidase_M23 PF01551.22 gi|121639174|ref|YP_979398.1| - 0.14 12.3 5.6 0.1 12.8 1.5 2.7 3 0 0 3 3 2 0 Peptidase family M23 Sigma70_r4 PF04545.16 gi|121639175|ref|YP_979399.1| - 1.2e-17 63.1 2.1 3.6e-17 61.6 1.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r3 PF04539.16 gi|121639175|ref|YP_979399.1| - 6.9e-13 48.5 0.1 5.5e-11 42.4 0.0 2.2 2 0 0 2 2 2 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 gi|121639175|ref|YP_979399.1| - 1.6e-12 47.0 0.0 2.7e-12 46.3 0.0 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639175|ref|YP_979399.1| - 2.5e-10 39.9 2.3 3.7e-10 39.3 0.7 2.1 2 1 0 2 2 2 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|121639175|ref|YP_979399.1| - 1.3e-05 25.0 1.5 0.059 13.3 0.2 2.7 2 1 0 2 2 2 2 MarR family TetR_C_11 PF16859.5 gi|121639175|ref|YP_979399.1| - 0.00023 21.5 4.0 0.014 15.7 0.2 2.5 3 0 0 3 3 2 1 Tetracyclin repressor-like, C-terminal domain HTH_23 PF13384.6 gi|121639175|ref|YP_979399.1| - 0.00025 20.8 0.6 0.0011 18.7 0.1 2.3 2 1 1 3 3 3 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|121639175|ref|YP_979399.1| - 0.00025 20.9 1.2 0.004 17.1 0.2 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|121639175|ref|YP_979399.1| - 0.00029 20.3 0.3 0.01 15.4 0.0 2.9 2 1 1 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|121639175|ref|YP_979399.1| - 0.00038 20.3 0.1 0.0087 16.0 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_3 PF01381.22 gi|121639175|ref|YP_979399.1| - 0.00067 19.7 0.4 0.023 14.8 0.1 2.7 3 0 0 3 3 2 1 Helix-turn-helix HTH_AsnC-type PF13404.6 gi|121639175|ref|YP_979399.1| - 0.0015 18.3 0.5 2.4 8.1 0.0 3.1 2 1 1 3 3 3 2 AsnC-type helix-turn-helix domain HTH_IclR PF09339.10 gi|121639175|ref|YP_979399.1| - 0.0033 17.2 3.6 0.6 9.9 0.3 2.7 2 1 0 2 2 2 2 IclR helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|121639175|ref|YP_979399.1| - 0.011 15.5 0.2 0.26 11.2 0.0 2.4 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sigma70_ECF PF07638.11 gi|121639175|ref|YP_979399.1| - 0.015 15.2 0.1 0.026 14.4 0.1 1.4 1 0 0 1 1 1 0 ECF sigma factor HTH_37 PF13744.6 gi|121639175|ref|YP_979399.1| - 0.018 15.0 0.3 0.15 12.0 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|121639175|ref|YP_979399.1| - 0.039 14.1 0.0 1.2 9.4 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|121639175|ref|YP_979399.1| - 0.054 13.4 0.1 5.1 7.1 0.1 2.7 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family Phage_antitermQ PF06530.12 gi|121639175|ref|YP_979399.1| - 0.065 13.1 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Phage antitermination protein Q HTH_20 PF12840.7 gi|121639175|ref|YP_979399.1| - 0.073 13.1 1.6 6 7.0 0.2 3.0 2 1 0 2 2 2 0 Helix-turn-helix domain IF2_N PF04760.15 gi|121639175|ref|YP_979399.1| - 0.08 12.8 0.1 0.33 10.8 0.0 2.1 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_10 PF04967.12 gi|121639175|ref|YP_979399.1| - 0.13 12.1 1.2 2.5 8.0 0.1 2.8 2 1 1 3 3 3 0 HTH DNA binding domain KORA PF16509.5 gi|121639175|ref|YP_979399.1| - 0.14 12.4 0.0 0.36 11.1 0.0 1.7 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_31 PF13560.6 gi|121639175|ref|YP_979399.1| - 0.15 12.4 0.2 0.15 12.4 0.2 2.7 3 1 0 3 3 2 0 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121639175|ref|YP_979399.1| - 0.15 12.2 0.1 0.9 9.7 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family HATPase_c_2 PF13581.6 gi|121639176|ref|YP_979400.1| - 2.8e-05 24.1 0.2 6.1e-05 23.0 0.2 1.7 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain CitMHS PF03600.16 gi|121639177|ref|YP_979401.1| - 0.023 13.9 0.3 0.024 13.8 0.3 1.1 1 0 0 1 1 1 0 Citrate transporter DUF202 PF02656.15 gi|121639177|ref|YP_979401.1| - 0.11 13.0 4.8 0.22 12.0 4.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF2207 PF09972.9 gi|121639177|ref|YP_979401.1| - 0.18 10.6 0.0 0.19 10.4 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5337 PF17272.2 gi|121639178|ref|YP_979402.1| - 0.92 9.4 6.2 6 6.8 6.2 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5337) DUF3040 PF11239.8 gi|121639178|ref|YP_979402.1| - 3.7 7.9 7.7 0.7 10.2 3.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) DUF2244 PF10003.9 gi|121639178|ref|YP_979402.1| - 5.1 6.8 9.5 0.87 9.3 1.8 2.3 2 1 0 2 2 2 0 Integral membrane protein (DUF2244) Aminotran_3 PF00202.21 gi|121639179|ref|YP_979403.1| - 1.4e-75 254.5 0.0 1.7e-75 254.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III HTH_24 PF13412.6 gi|121639180|ref|YP_979404.1| - 5.2e-13 48.3 0.2 8.4e-13 47.7 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|121639180|ref|YP_979404.1| - 5.8e-13 48.6 0.1 1.4e-12 47.4 0.1 1.6 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|121639180|ref|YP_979404.1| - 9e-13 47.8 4.3 1.6e-12 47.0 4.3 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|121639180|ref|YP_979404.1| - 1e-06 28.5 0.6 2e-06 27.6 0.6 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|121639180|ref|YP_979404.1| - 0.00012 21.7 0.6 0.00024 20.9 0.6 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|121639180|ref|YP_979404.1| - 0.00015 21.6 0.0 0.0003 20.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|121639180|ref|YP_979404.1| - 0.00038 20.4 0.8 0.00084 19.4 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|121639180|ref|YP_979404.1| - 0.00046 20.3 2.3 0.00057 20.0 0.5 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|121639180|ref|YP_979404.1| - 0.00054 19.9 1.1 0.00067 19.6 0.1 1.7 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 gi|121639180|ref|YP_979404.1| - 0.0015 18.3 0.9 0.0023 17.8 0.2 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_CodY PF08222.11 gi|121639180|ref|YP_979404.1| - 0.0028 17.2 0.6 0.0054 16.3 0.6 1.5 1 0 0 1 1 1 1 CodY helix-turn-helix domain HTH_47 PF16221.5 gi|121639180|ref|YP_979404.1| - 0.0053 16.3 0.1 0.0082 15.7 0.1 1.3 1 0 0 1 1 1 1 winged helix-turn-helix HTH_10 PF04967.12 gi|121639180|ref|YP_979404.1| - 0.01 15.6 0.1 0.027 14.3 0.1 1.7 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|121639180|ref|YP_979404.1| - 0.021 14.3 0.7 0.067 12.7 0.7 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|121639180|ref|YP_979404.1| - 0.026 14.5 0.1 0.054 13.5 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_41 PF14502.6 gi|121639180|ref|YP_979404.1| - 0.026 14.2 0.0 0.065 12.9 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain GntR PF00392.21 gi|121639180|ref|YP_979404.1| - 0.034 13.8 1.6 0.036 13.7 0.4 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 gi|121639180|ref|YP_979404.1| - 0.066 13.0 0.3 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 LexA DNA binding domain HTH_27 PF13463.6 gi|121639180|ref|YP_979404.1| - 0.069 13.7 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain MIase PF02426.16 gi|121639180|ref|YP_979404.1| - 0.079 13.1 0.0 0.24 11.6 0.0 1.9 2 1 1 3 3 3 0 Muconolactone delta-isomerase HTH_Mga PF08280.11 gi|121639180|ref|YP_979404.1| - 0.18 11.9 0.0 0.37 10.8 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain DUF1338 PF07063.13 gi|121639181|ref|YP_979405.1| - 3.3e-103 345.3 0.0 3.8e-103 345.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1338) Glyoxalase PF00903.25 gi|121639181|ref|YP_979405.1| - 0.02 15.1 0.0 0.054 13.7 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aldedh PF00171.22 gi|121639182|ref|YP_979406.1| - 8.7e-134 446.5 0.3 1.1e-133 446.2 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF4143 PF13635.6 gi|121639183|ref|YP_979407.1| - 4.5e-26 91.4 0.0 6.1e-26 91.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) TetR_N PF00440.23 gi|121639184|ref|YP_979408.1| - 1.9e-15 56.3 0.2 3.8e-15 55.4 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|121639184|ref|YP_979408.1| - 0.0033 17.6 0.0 0.0047 17.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase NUDIX-like PF09296.11 gi|121639184|ref|YP_979408.1| - 0.065 13.9 0.2 0.46 11.2 0.2 2.4 1 1 0 1 1 1 0 NADH pyrophosphatase-like rudimentary NUDIX domain DEAD_assoc PF08494.11 gi|121639185|ref|YP_979409.1| - 2.4e-70 236.2 0.8 8.1e-70 234.5 0.1 2.1 2 0 0 2 2 2 1 DEAD/H associated DEAD PF00270.29 gi|121639185|ref|YP_979409.1| - 3.9e-26 91.9 0.0 7.7e-26 90.9 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121639185|ref|YP_979409.1| - 1.9e-14 53.9 0.0 3.3e-12 46.7 0.0 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|121639185|ref|YP_979409.1| - 2.8e-05 24.2 0.0 6.3e-05 23.0 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|121639185|ref|YP_979409.1| - 0.0005 20.4 0.1 0.0064 16.8 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121639185|ref|YP_979409.1| - 0.00099 18.7 0.4 0.0048 16.5 0.3 2.3 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 gi|121639185|ref|YP_979409.1| - 0.017 14.6 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein Phage_base_V PF04717.12 gi|121639185|ref|YP_979409.1| - 0.14 12.1 0.1 0.35 10.8 0.1 1.6 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Fapy_DNA_glyco PF01149.24 gi|121639186|ref|YP_979410.1| - 2e-11 44.5 0.1 3.4e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase N-terminal domain H2TH PF06831.14 gi|121639186|ref|YP_979410.1| - 1.3e-10 41.1 0.0 2e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Nudix_N_2 PF14803.6 gi|121639186|ref|YP_979410.1| - 0.00059 19.7 3.4 0.0016 18.3 3.4 1.8 1 0 0 1 1 1 1 Nudix N-terminal zf-FPG_IleRS PF06827.14 gi|121639186|ref|YP_979410.1| - 0.014 15.3 4.8 0.032 14.1 4.8 1.7 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Esterase_phd PF10503.9 gi|121639187|ref|YP_979411.1| - 1e-10 41.5 1.0 1.5e-10 41.0 1.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 gi|121639187|ref|YP_979411.1| - 9.6e-06 25.2 1.1 2.7e-05 23.8 0.2 2.1 2 1 1 3 3 3 1 Prolyl oligopeptidase family Sulfatase PF00884.23 gi|121639188|ref|YP_979412.1| - 1.2e-101 340.2 0.0 1.5e-101 339.8 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF1269 PF06897.12 gi|121639188|ref|YP_979412.1| - 1.5e-09 38.1 6.1 2.9e-09 37.1 6.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Phosphodiest PF01663.22 gi|121639188|ref|YP_979412.1| - 0.0039 16.8 0.2 0.35 10.4 0.0 2.4 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 gi|121639188|ref|YP_979412.1| - 0.022 14.7 0.0 0.093 12.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function Gly-zipper_OmpA PF13436.6 gi|121639188|ref|YP_979412.1| - 0.034 13.9 12.2 1.2 8.9 3.0 2.9 2 0 0 2 2 2 0 Glycine-zipper domain Aft1_HRA PF11786.8 gi|121639188|ref|YP_979412.1| - 0.073 13.4 0.1 0.33 11.3 0.0 2.1 2 0 0 2 2 2 0 Aft1 HRA domain Gly-zipper_YMGG PF13441.6 gi|121639188|ref|YP_979412.1| - 0.083 12.6 16.2 0.34 10.7 16.2 2.1 1 1 0 1 1 1 0 YMGG-like Gly-zipper DUF456 PF04306.13 gi|121639188|ref|YP_979412.1| - 0.11 12.7 8.1 0.23 11.8 8.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Acyl-CoA_dh_2 PF08028.11 gi|121639188|ref|YP_979412.1| - 0.14 12.5 7.1 0.3 11.4 7.1 1.6 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain PseudoU_synth_2 PF00849.22 gi|121639189|ref|YP_979413.1| - 5e-21 75.5 0.0 6.5e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF3659 PF12396.8 gi|121639189|ref|YP_979413.1| - 0.071 13.0 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3659) PhoU PF01895.19 gi|121639190|ref|YP_979414.1| - 3.3e-24 85.1 4.0 4.1e-14 52.8 1.0 2.1 2 0 0 2 2 2 2 PhoU domain DUF4677 PF15726.5 gi|121639190|ref|YP_979414.1| - 0.041 14.0 0.2 0.073 13.2 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4677) Peptidase_S77 PF03420.13 gi|121639190|ref|YP_979414.1| - 0.12 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Prohead core protein serine protease KNTase_C PF07827.11 gi|121639190|ref|YP_979414.1| - 0.13 12.1 0.0 0.42 10.4 0.0 1.9 1 1 1 2 2 2 0 KNTase C-terminal domain DAO PF01266.24 gi|121639191|ref|YP_979415.1| - 6e-48 164.2 5.3 8.8e-48 163.7 5.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 gi|121639191|ref|YP_979415.1| - 5.5e-28 97.4 0.0 1.2e-27 96.3 0.0 1.6 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_2 PF00890.24 gi|121639191|ref|YP_979415.1| - 6.1e-10 38.7 7.1 1e-05 24.9 1.2 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|121639191|ref|YP_979415.1| - 2e-09 37.4 1.4 9.9e-07 28.4 0.3 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121639191|ref|YP_979415.1| - 7.4e-08 32.0 2.1 4.4e-07 29.5 2.1 2.1 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121639191|ref|YP_979415.1| - 5.5e-05 22.5 0.7 0.0001 21.7 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121639191|ref|YP_979415.1| - 0.00066 18.9 0.5 0.00066 18.9 0.5 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|121639191|ref|YP_979415.1| - 0.00098 19.3 1.0 0.0038 17.4 1.0 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 gi|121639191|ref|YP_979415.1| - 0.0019 18.1 0.1 0.0037 17.2 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|121639191|ref|YP_979415.1| - 0.0044 17.6 2.7 0.0073 16.8 0.6 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121639191|ref|YP_979415.1| - 0.0066 15.2 0.9 0.01 14.5 0.9 1.2 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|121639191|ref|YP_979415.1| - 0.012 14.9 0.1 0.035 13.4 0.1 1.7 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|121639191|ref|YP_979415.1| - 0.021 14.1 0.4 0.021 14.1 0.4 1.8 2 0 0 2 2 2 0 Thi4 family AAA_31 PF13614.6 gi|121639192|ref|YP_979416.1| - 9.2e-55 185.3 0.0 1e-54 185.1 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121639192|ref|YP_979416.1| - 4.2e-20 72.1 0.0 9.4e-20 71.0 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|121639192|ref|YP_979416.1| - 1.9e-12 47.2 0.0 2.3e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|121639192|ref|YP_979416.1| - 3.5e-10 39.6 0.2 0.00034 20.0 0.1 2.1 2 0 0 2 2 2 2 ATPase MipZ ArsA_ATPase PF02374.15 gi|121639192|ref|YP_979416.1| - 8.8e-10 38.2 0.0 2.4e-09 36.8 0.0 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase ParA PF10609.9 gi|121639192|ref|YP_979416.1| - 7.1e-08 32.2 0.7 1.4e-07 31.3 0.7 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|121639192|ref|YP_979416.1| - 0.00013 21.5 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ATP_bind_1 PF03029.17 gi|121639192|ref|YP_979416.1| - 0.00063 19.6 0.0 0.00098 19.0 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein VirC1 PF07015.11 gi|121639192|ref|YP_979416.1| - 0.0026 17.1 0.1 0.0047 16.3 0.1 1.4 1 0 0 1 1 1 1 VirC1 protein SRP54 PF00448.22 gi|121639192|ref|YP_979416.1| - 0.015 15.0 0.1 0.076 12.6 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|121639192|ref|YP_979416.1| - 0.026 13.5 0.1 0.042 12.8 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|121639192|ref|YP_979416.1| - 0.029 14.2 0.0 0.097 12.5 0.0 1.7 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 gi|121639192|ref|YP_979416.1| - 0.082 12.5 0.2 0.11 12.0 0.2 1.2 1 0 0 1 1 1 0 AAA domain His_Phos_1 PF00300.22 gi|121639193|ref|YP_979417.1| - 1e-44 152.6 0.2 1.1e-44 152.4 0.2 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Reo_sigma1 PF01664.16 gi|121639193|ref|YP_979417.1| - 0.033 13.5 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Reovirus viral attachment protein sigma 1 Chorismate_bind PF00425.18 gi|121639194|ref|YP_979418.1| - 9.1e-70 235.2 0.0 1.1e-69 234.9 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Acetyltransf_1 PF00583.25 gi|121639195|ref|YP_979419.1| - 1.1e-10 41.8 0.0 1.3e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|121639195|ref|YP_979419.1| - 6e-08 32.6 0.0 6.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|121639195|ref|YP_979419.1| - 8.9e-06 25.7 0.0 1e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121639195|ref|YP_979419.1| - 3.2e-05 24.3 0.0 4.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|121639195|ref|YP_979419.1| - 0.0065 16.1 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_13 PF13880.6 gi|121639195|ref|YP_979419.1| - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_8 PF13523.6 gi|121639195|ref|YP_979419.1| - 0.035 13.8 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|121639195|ref|YP_979419.1| - 0.079 12.4 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_9 PF13527.7 gi|121639195|ref|YP_979419.1| - 0.1 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SKG6 PF08693.10 gi|121639196|ref|YP_979420.1| - 7 6.1 14.1 0.27 10.7 6.3 2.5 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DAGK_cat PF00781.24 gi|121639197|ref|YP_979421.1| - 2.7e-24 85.2 0.8 4.5e-24 84.5 0.8 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 gi|121639197|ref|YP_979421.1| - 0.0086 15.3 0.2 0.012 14.9 0.2 1.2 1 0 0 1 1 1 1 ATP-NAD kinase Whib PF02467.16 gi|121639198|ref|YP_979422.1| - 8.5e-27 93.5 0.5 1.1e-26 93.2 0.5 1.1 1 0 0 1 1 1 1 Transcription factor WhiB H_kinase_N PF12282.8 gi|121639199|ref|YP_979423.1| - 4.7e-44 149.8 0.3 1.6e-43 148.1 0.0 2.0 2 0 0 2 2 2 1 Signal transduction histidine kinase HisKA_2 PF07568.12 gi|121639199|ref|YP_979423.1| - 5.4e-22 77.7 2.9 1.2e-21 76.6 2.9 1.6 1 0 0 1 1 1 1 Histidine kinase HWE_HK PF07536.14 gi|121639199|ref|YP_979423.1| - 2.2e-08 34.7 1.7 5.5e-08 33.4 1.4 1.9 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c PF02518.26 gi|121639199|ref|YP_979423.1| - 3.4e-08 34.0 0.0 1.1e-07 32.3 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|121639199|ref|YP_979423.1| - 5.2e-06 26.4 0.0 1.2e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|121639199|ref|YP_979423.1| - 0.0006 20.1 0.5 0.005 17.1 0.1 2.6 1 1 1 2 2 2 1 PAS fold Biotin_lipoyl PF00364.22 gi|121639200|ref|YP_979424.1| - 3.4e-17 62.0 6.9 3.9e-17 61.8 6.9 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|121639200|ref|YP_979424.1| - 5.5e-07 29.3 9.8 3.9e-05 23.4 1.0 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|121639200|ref|YP_979424.1| - 8.2e-05 23.3 4.1 0.0038 17.9 0.6 2.0 2 0 0 2 2 2 2 HlyD family secretion protein RnfC_N PF13375.6 gi|121639200|ref|YP_979424.1| - 0.00051 20.0 2.5 0.0039 17.1 0.6 2.0 1 1 1 2 2 2 2 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|121639200|ref|YP_979424.1| - 0.0011 18.2 2.2 0.038 13.2 0.2 2.0 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Peptidase_M23 PF01551.22 gi|121639200|ref|YP_979424.1| - 0.0045 17.2 2.5 0.79 10.0 0.3 2.4 1 1 2 3 3 3 2 Peptidase family M23 GCV_H PF01597.19 gi|121639200|ref|YP_979424.1| - 0.01 15.7 1.3 0.011 15.6 1.3 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF2118 PF09891.9 gi|121639200|ref|YP_979424.1| - 0.012 15.6 0.5 0.66 9.9 0.1 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2118) NQRA PF05896.11 gi|121639200|ref|YP_979424.1| - 0.021 14.3 0.8 0.035 13.5 0.7 1.4 1 1 1 2 2 2 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PYNP_C PF07831.13 gi|121639200|ref|YP_979424.1| - 0.029 14.0 1.6 3.6 7.3 0.1 2.2 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain zf-HC2 PF13490.6 gi|121639201|ref|YP_979425.1| - 6.7e-10 39.0 4.2 6.7e-10 39.0 4.2 1.8 2 0 0 2 2 2 1 Putative zinc-finger Sigma70_r2 PF04542.14 gi|121639203|ref|YP_979427.1| - 7.2e-18 64.1 0.1 1.5e-17 63.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639203|ref|YP_979427.1| - 1.1e-16 60.2 0.0 2.5e-16 59.1 0.0 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|121639203|ref|YP_979427.1| - 1.8e-10 40.2 0.0 4.4e-10 38.9 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 adh_short PF00106.25 gi|121639204|ref|YP_979428.1| - 1e-28 100.1 0.0 1.5e-28 99.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639204|ref|YP_979428.1| - 7e-28 97.8 0.2 9.6e-28 97.3 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121639204|ref|YP_979428.1| - 1.2e-07 31.8 0.1 1.8e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 KR domain DFP PF04127.15 gi|121639204|ref|YP_979428.1| - 0.036 13.9 0.1 0.065 13.0 0.1 1.4 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NAD_binding_10 PF13460.6 gi|121639204|ref|YP_979428.1| - 0.099 12.5 0.9 0.26 11.2 1.0 1.7 1 1 0 1 1 1 0 NAD(P)H-binding tRNA_edit PF04073.15 gi|121639206|ref|YP_979430.1| - 1.4e-06 28.4 0.0 1.7e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain APH PF01636.23 gi|121639207|ref|YP_979431.1| - 9.4e-33 114.1 2.6 9.4e-33 114.1 2.6 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Acetyltransf_3 PF13302.7 gi|121639207|ref|YP_979431.1| - 2.7e-18 67.0 0.0 6.1e-18 65.8 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|121639207|ref|YP_979431.1| - 8.7e-08 32.4 0.0 1.7e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 gi|121639207|ref|YP_979431.1| - 0.0097 15.6 0.0 0.048 13.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|121639207|ref|YP_979431.1| - 0.0097 15.8 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121639207|ref|YP_979431.1| - 0.059 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 FR47-like protein RIO1 PF01163.22 gi|121639207|ref|YP_979431.1| - 0.084 12.5 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 RIO1 family SRAP PF02586.14 gi|121639208|ref|YP_979432.1| - 5.6e-65 218.9 0.0 6.4e-65 218.8 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) EPSP_synthase PF00275.20 gi|121639209|ref|YP_979433.1| - 3.1e-120 401.7 0.0 3.5e-120 401.5 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RsgA_GTPase PF03193.16 gi|121639210|ref|YP_979434.1| - 1.8e-40 138.5 0.0 2.5e-40 138.1 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|121639210|ref|YP_979434.1| - 6.9e-06 26.1 0.0 1.3e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|121639210|ref|YP_979434.1| - 2.8e-05 24.6 0.1 5.2e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|121639210|ref|YP_979434.1| - 0.00045 20.6 1.0 0.0012 19.3 0.2 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|121639210|ref|YP_979434.1| - 0.0047 16.6 0.0 0.0091 15.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|121639210|ref|YP_979434.1| - 0.0069 16.7 0.1 0.013 15.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain GTP_EFTU PF00009.27 gi|121639210|ref|YP_979434.1| - 0.017 14.7 0.1 0.95 9.0 0.1 2.7 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 gi|121639210|ref|YP_979434.1| - 0.027 14.6 0.3 0.074 13.2 0.1 1.8 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|121639210|ref|YP_979434.1| - 0.028 14.6 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NACHT PF05729.12 gi|121639210|ref|YP_979434.1| - 0.087 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Ras PF00071.22 gi|121639210|ref|YP_979434.1| - 0.12 11.9 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Ras family AIG1 PF04548.16 gi|121639210|ref|YP_979434.1| - 0.16 11.3 0.2 0.37 10.1 0.1 1.6 2 1 0 2 2 2 0 AIG1 family MobB PF03205.14 gi|121639210|ref|YP_979434.1| - 0.17 11.8 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 gi|121639210|ref|YP_979434.1| - 0.19 11.3 0.0 0.89 9.1 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain HNH_repeat PF18780.1 gi|121639210|ref|YP_979434.1| - 0.21 11.4 0.1 0.51 10.2 0.1 1.6 1 0 0 1 1 1 0 Homing endonuclease repeat RNA_helicase PF00910.22 gi|121639210|ref|YP_979434.1| - 0.24 11.8 0.0 0.41 11.1 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Septin PF00735.18 gi|121639210|ref|YP_979434.1| - 0.3 10.3 0.0 0.43 9.8 0.0 1.2 1 0 0 1 1 1 0 Septin FA_desaturase PF00487.24 gi|121639211|ref|YP_979435.1| - 3.2e-37 128.7 5.2 4.5e-37 128.3 5.2 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Chlorovi_GP_rpt PF06598.11 gi|121639211|ref|YP_979435.1| - 0.069 13.2 0.7 0.15 12.1 0.7 1.5 1 0 0 1 1 1 0 Chlorovirus glycoprotein repeat Fer2 PF00111.27 gi|121639212|ref|YP_979436.1| - 2.6e-10 40.1 0.5 4.5e-10 39.3 0.5 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 gi|121639212|ref|YP_979436.1| - 1.1e-09 38.5 0.0 1.9e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|121639212|ref|YP_979436.1| - 1.7e-08 35.1 0.0 3.2e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 gi|121639212|ref|YP_979436.1| - 0.053 13.6 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Ferric reductase NAD binding domain MlrC_C PF07171.12 gi|121639212|ref|YP_979436.1| - 0.3 11.2 1.6 1.3 9.2 0.1 2.4 2 1 1 3 3 3 0 MlrC C-terminus Aminotran_3 PF00202.21 gi|121639213|ref|YP_979437.1| - 0.0023 16.7 0.0 0.0028 16.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III HTH_24 PF13412.6 gi|121639214|ref|YP_979438.1| - 5.2e-13 48.3 0.2 8.4e-13 47.7 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|121639214|ref|YP_979438.1| - 5.8e-13 48.6 0.1 1.4e-12 47.4 0.1 1.6 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|121639214|ref|YP_979438.1| - 9e-13 47.8 4.3 1.6e-12 47.0 4.3 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|121639214|ref|YP_979438.1| - 1e-06 28.5 0.6 2e-06 27.6 0.6 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|121639214|ref|YP_979438.1| - 0.00012 21.7 0.6 0.00024 20.9 0.6 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|121639214|ref|YP_979438.1| - 0.00015 21.6 0.0 0.0003 20.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|121639214|ref|YP_979438.1| - 0.00038 20.4 0.8 0.00084 19.4 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|121639214|ref|YP_979438.1| - 0.00046 20.3 2.3 0.00057 20.0 0.5 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|121639214|ref|YP_979438.1| - 0.00054 19.9 1.1 0.00067 19.6 0.1 1.7 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 gi|121639214|ref|YP_979438.1| - 0.0015 18.3 0.9 0.0023 17.8 0.2 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_CodY PF08222.11 gi|121639214|ref|YP_979438.1| - 0.0028 17.2 0.6 0.0054 16.3 0.6 1.5 1 0 0 1 1 1 1 CodY helix-turn-helix domain HTH_47 PF16221.5 gi|121639214|ref|YP_979438.1| - 0.0053 16.3 0.1 0.0082 15.7 0.1 1.3 1 0 0 1 1 1 1 winged helix-turn-helix HTH_10 PF04967.12 gi|121639214|ref|YP_979438.1| - 0.01 15.6 0.1 0.027 14.3 0.1 1.7 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|121639214|ref|YP_979438.1| - 0.021 14.3 0.7 0.067 12.7 0.7 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|121639214|ref|YP_979438.1| - 0.026 14.5 0.1 0.054 13.5 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_41 PF14502.6 gi|121639214|ref|YP_979438.1| - 0.026 14.2 0.0 0.065 12.9 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain GntR PF00392.21 gi|121639214|ref|YP_979438.1| - 0.034 13.8 1.6 0.036 13.7 0.4 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 gi|121639214|ref|YP_979438.1| - 0.066 13.0 0.3 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 LexA DNA binding domain HTH_27 PF13463.6 gi|121639214|ref|YP_979438.1| - 0.069 13.7 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain MIase PF02426.16 gi|121639214|ref|YP_979438.1| - 0.079 13.1 0.0 0.24 11.6 0.0 1.9 2 1 1 3 3 3 0 Muconolactone delta-isomerase HTH_Mga PF08280.11 gi|121639214|ref|YP_979438.1| - 0.18 11.9 0.0 0.37 10.8 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain DUF1338 PF07063.13 gi|121639215|ref|YP_979439.1| - 3.3e-103 345.3 0.0 3.8e-103 345.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1338) Glyoxalase PF00903.25 gi|121639215|ref|YP_979439.1| - 0.02 15.1 0.0 0.054 13.7 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aldedh PF00171.22 gi|121639216|ref|YP_979440.1| - 8.7e-134 446.5 0.3 1.1e-133 446.2 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF4143 PF13635.6 gi|121639217|ref|YP_979441.1| - 4.5e-26 91.4 0.0 6.1e-26 91.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) TetR_N PF00440.23 gi|121639218|ref|YP_979442.1| - 1.9e-15 56.3 0.2 3.8e-15 55.4 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|121639218|ref|YP_979442.1| - 0.0033 17.6 0.0 0.0047 17.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase NUDIX-like PF09296.11 gi|121639218|ref|YP_979442.1| - 0.065 13.9 0.2 0.46 11.2 0.2 2.4 1 1 0 1 1 1 0 NADH pyrophosphatase-like rudimentary NUDIX domain DEAD_assoc PF08494.11 gi|121639219|ref|YP_979443.1| - 2.4e-70 236.2 0.8 8.1e-70 234.5 0.1 2.1 2 0 0 2 2 2 1 DEAD/H associated DEAD PF00270.29 gi|121639219|ref|YP_979443.1| - 3.9e-26 91.9 0.0 7.7e-26 90.9 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|121639219|ref|YP_979443.1| - 1.9e-14 53.9 0.0 3.3e-12 46.7 0.0 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|121639219|ref|YP_979443.1| - 2.8e-05 24.2 0.0 6.3e-05 23.0 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|121639219|ref|YP_979443.1| - 0.0005 20.4 0.1 0.0064 16.8 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|121639219|ref|YP_979443.1| - 0.00099 18.7 0.4 0.0048 16.5 0.3 2.3 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 gi|121639219|ref|YP_979443.1| - 0.017 14.6 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein Phage_base_V PF04717.12 gi|121639219|ref|YP_979443.1| - 0.14 12.1 0.1 0.35 10.8 0.1 1.6 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Fapy_DNA_glyco PF01149.24 gi|121639220|ref|YP_979444.1| - 2e-11 44.5 0.1 3.4e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase N-terminal domain H2TH PF06831.14 gi|121639220|ref|YP_979444.1| - 1.3e-10 41.1 0.0 2e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Nudix_N_2 PF14803.6 gi|121639220|ref|YP_979444.1| - 0.00059 19.7 3.4 0.0016 18.3 3.4 1.8 1 0 0 1 1 1 1 Nudix N-terminal zf-FPG_IleRS PF06827.14 gi|121639220|ref|YP_979444.1| - 0.014 15.3 4.8 0.032 14.1 4.8 1.7 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Esterase_phd PF10503.9 gi|121639221|ref|YP_979445.1| - 1e-10 41.5 1.0 1.5e-10 41.0 1.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 gi|121639221|ref|YP_979445.1| - 9.6e-06 25.2 1.1 2.7e-05 23.8 0.2 2.1 2 1 1 3 3 3 1 Prolyl oligopeptidase family Sulfatase PF00884.23 gi|121639222|ref|YP_979446.1| - 1.2e-101 340.2 0.0 1.5e-101 339.8 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF1269 PF06897.12 gi|121639222|ref|YP_979446.1| - 1.5e-09 38.1 6.1 2.9e-09 37.1 6.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Phosphodiest PF01663.22 gi|121639222|ref|YP_979446.1| - 0.0039 16.8 0.2 0.35 10.4 0.0 2.4 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 gi|121639222|ref|YP_979446.1| - 0.022 14.7 0.0 0.093 12.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function Gly-zipper_OmpA PF13436.6 gi|121639222|ref|YP_979446.1| - 0.034 13.9 12.2 1.2 8.9 3.0 2.9 2 0 0 2 2 2 0 Glycine-zipper domain Aft1_HRA PF11786.8 gi|121639222|ref|YP_979446.1| - 0.073 13.4 0.1 0.33 11.3 0.0 2.1 2 0 0 2 2 2 0 Aft1 HRA domain Gly-zipper_YMGG PF13441.6 gi|121639222|ref|YP_979446.1| - 0.083 12.6 16.2 0.34 10.7 16.2 2.1 1 1 0 1 1 1 0 YMGG-like Gly-zipper DUF456 PF04306.13 gi|121639222|ref|YP_979446.1| - 0.11 12.7 8.1 0.23 11.8 8.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Acyl-CoA_dh_2 PF08028.11 gi|121639222|ref|YP_979446.1| - 0.14 12.5 7.1 0.3 11.4 7.1 1.6 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain PseudoU_synth_2 PF00849.22 gi|121639223|ref|YP_979447.1| - 5e-21 75.5 0.0 6.5e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF3659 PF12396.8 gi|121639223|ref|YP_979447.1| - 0.071 13.0 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3659) PhoU PF01895.19 gi|121639224|ref|YP_979448.1| - 3.3e-24 85.1 4.0 4.1e-14 52.8 1.0 2.1 2 0 0 2 2 2 2 PhoU domain DUF4677 PF15726.5 gi|121639224|ref|YP_979448.1| - 0.041 14.0 0.2 0.073 13.2 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4677) Peptidase_S77 PF03420.13 gi|121639224|ref|YP_979448.1| - 0.12 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Prohead core protein serine protease KNTase_C PF07827.11 gi|121639224|ref|YP_979448.1| - 0.13 12.1 0.0 0.42 10.4 0.0 1.9 1 1 1 2 2 2 0 KNTase C-terminal domain DAO PF01266.24 gi|121639225|ref|YP_979449.1| - 6e-48 164.2 5.3 8.8e-48 163.7 5.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 gi|121639225|ref|YP_979449.1| - 5.5e-28 97.4 0.0 1.2e-27 96.3 0.0 1.6 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_2 PF00890.24 gi|121639225|ref|YP_979449.1| - 6.1e-10 38.7 7.1 1e-05 24.9 1.2 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|121639225|ref|YP_979449.1| - 2e-09 37.4 1.4 9.9e-07 28.4 0.3 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121639225|ref|YP_979449.1| - 7.4e-08 32.0 2.1 4.4e-07 29.5 2.1 2.1 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121639225|ref|YP_979449.1| - 5.5e-05 22.5 0.7 0.0001 21.7 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121639225|ref|YP_979449.1| - 0.00066 18.9 0.5 0.00066 18.9 0.5 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|121639225|ref|YP_979449.1| - 0.00098 19.3 1.0 0.0038 17.4 1.0 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 gi|121639225|ref|YP_979449.1| - 0.0019 18.1 0.1 0.0037 17.2 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|121639225|ref|YP_979449.1| - 0.0044 17.6 2.7 0.0073 16.8 0.6 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121639225|ref|YP_979449.1| - 0.0066 15.2 0.9 0.01 14.5 0.9 1.2 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|121639225|ref|YP_979449.1| - 0.012 14.9 0.1 0.035 13.4 0.1 1.7 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|121639225|ref|YP_979449.1| - 0.021 14.1 0.4 0.021 14.1 0.4 1.8 2 0 0 2 2 2 0 Thi4 family Pyr_redox_2 PF07992.14 gi|121639226|ref|YP_979450.1| - 5.1e-48 163.8 1.6 7.5e-48 163.3 1.6 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|121639226|ref|YP_979450.1| - 1.3e-24 86.6 0.4 3.8e-24 85.1 0.4 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|121639226|ref|YP_979450.1| - 2.9e-18 66.2 2.7 5.2e-15 55.8 0.2 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121639226|ref|YP_979450.1| - 1.8e-05 24.1 0.3 0.0034 16.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|121639226|ref|YP_979450.1| - 2.2e-05 23.8 0.1 6.7e-05 22.2 0.0 1.7 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.22 gi|121639226|ref|YP_979450.1| - 8.4e-05 21.8 5.6 0.00014 21.1 0.2 2.9 3 1 0 3 3 3 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|121639226|ref|YP_979450.1| - 0.00011 21.2 0.1 0.0002 20.3 0.1 1.4 1 0 0 1 1 1 1 Tryptophan halogenase HI0933_like PF03486.14 gi|121639226|ref|YP_979450.1| - 0.00041 19.2 1.1 0.28 9.9 0.8 2.4 2 0 0 2 2 2 2 HI0933-like protein FAD_oxidored PF12831.7 gi|121639226|ref|YP_979450.1| - 0.0034 16.8 1.1 0.19 11.0 0.4 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|121639226|ref|YP_979450.1| - 0.011 15.0 3.6 0.54 9.5 0.4 2.8 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 gi|121639226|ref|YP_979450.1| - 0.024 14.0 0.5 0.041 13.2 0.1 1.5 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|121639226|ref|YP_979450.1| - 0.093 11.8 6.0 0.15 11.0 0.0 2.7 3 1 1 4 4 4 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 gi|121639226|ref|YP_979450.1| - 0.13 12.7 1.3 7.5 7.1 0.1 3.2 3 1 0 3 3 3 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|121639226|ref|YP_979450.1| - 0.25 11.3 8.9 4.1 7.4 0.1 3.4 4 0 0 4 4 4 0 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|121639226|ref|YP_979450.1| - 0.3 11.4 1.9 17 5.7 0.2 2.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain AIG2_2 PF13772.6 gi|121639227|ref|YP_979451.1| - 2.2e-26 92.1 0.0 2.7e-26 91.8 0.0 1.1 1 0 0 1 1 1 1 AIG2-like family GGACT PF06094.12 gi|121639227|ref|YP_979451.1| - 5.3e-09 36.7 0.0 6.8e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like Peptidase_M20 PF01546.28 gi|121639228|ref|YP_979452.1| - 1.7e-26 93.2 0.1 2.2e-26 92.9 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|121639228|ref|YP_979452.1| - 0.003 17.5 0.0 0.0065 16.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 gi|121639229|ref|YP_979453.1| - 4.3e-10 39.7 0.0 8e-10 38.8 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|121639229|ref|YP_979453.1| - 1.4e-08 34.6 0.0 3.7e-08 33.3 0.0 1.7 1 0 0 1 1 1 1 Peptidase dimerisation domain PNP_UDP_1 PF01048.20 gi|121639230|ref|YP_979454.1| - 3.2e-41 141.1 3.2 3.8e-41 140.9 3.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily PGM_PMM_I PF02878.16 gi|121639231|ref|YP_979455.1| - 5e-40 136.4 0.0 9e-40 135.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|121639231|ref|YP_979455.1| - 3.1e-20 72.7 0.1 1.1e-19 70.9 0.1 2.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|121639231|ref|YP_979455.1| - 1.2e-17 64.2 0.0 2.5e-17 63.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|121639231|ref|YP_979455.1| - 6.5e-06 26.2 0.0 2.1e-05 24.6 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain UPRTase PF14681.6 gi|121639232|ref|YP_979456.1| - 3.6e-62 209.5 0.0 4.1e-62 209.3 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|121639232|ref|YP_979456.1| - 1.4e-09 37.6 0.1 2.1e-09 37.1 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Phosphoesterase PF04185.14 gi|121639233|ref|YP_979457.1| - 4e-47 161.1 1.3 1.1e-42 146.6 0.1 2.9 1 1 1 2 2 2 2 Phosphoesterase family Sulfatase PF00884.23 gi|121639233|ref|YP_979457.1| - 0.062 12.7 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Sulfatase AP_endonuc_2 PF01261.24 gi|121639234|ref|YP_979458.1| - 0.027 13.9 0.1 0.33 10.4 0.0 2.2 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel Methyltransf_11 PF08241.12 gi|121639234|ref|YP_979458.1| - 0.14 12.8 0.1 0.35 11.5 0.1 1.6 1 0 0 1 1 1 0 Methyltransferase domain Exotox-A_target PF09102.10 gi|121639234|ref|YP_979458.1| - 0.32 11.0 2.6 0.43 10.6 1.3 1.8 2 0 0 2 2 2 0 Exotoxin A, targeting Abhydrolase_1 PF00561.20 gi|121639235|ref|YP_979459.1| - 1.7e-10 41.0 0.2 1.6e-09 37.8 0.2 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121639235|ref|YP_979459.1| - 9.6e-10 39.4 14.8 1.2e-09 39.2 14.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121639235|ref|YP_979459.1| - 0.0019 17.5 0.1 0.027 13.7 0.1 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 A_deaminase PF00962.22 gi|121639237|ref|YP_979461.1| - 2e-110 369.2 0.0 2.3e-110 369.0 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Glycos_transf_3 PF00591.21 gi|121639238|ref|YP_979462.1| - 1e-32 113.7 1.5 1.6e-32 113.1 1.5 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 gi|121639238|ref|YP_979462.1| - 5.2e-20 70.9 0.0 2.5e-19 68.7 0.0 2.1 2 0 0 2 2 2 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 gi|121639238|ref|YP_979462.1| - 3.1e-17 62.2 0.0 6.9e-17 61.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain dCMP_cyt_deam_1 PF00383.23 gi|121639239|ref|YP_979463.1| - 1e-10 41.4 0.4 1.3e-10 41.1 0.4 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_2 PF08211.12 gi|121639239|ref|YP_979463.1| - 8.2e-09 35.8 1.4 4.1e-07 30.3 0.2 2.1 2 0 0 2 2 2 2 Cytidine and deoxycytidylate deaminase zinc-binding region Sdh_cyt PF01127.22 gi|121639240|ref|YP_979464.1| - 8.7e-20 71.0 8.1 1.1e-19 70.7 8.1 1.1 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_C PF02300.17 gi|121639240|ref|YP_979464.1| - 0.64 10.1 5.4 0.29 11.2 1.2 1.9 1 1 1 2 2 2 0 Fumarate reductase subunit C Sdh_cyt PF01127.22 gi|121639241|ref|YP_979465.1| - 1.5e-16 60.5 2.8 2.1e-16 60.0 2.8 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FAD_binding_2 PF00890.24 gi|121639242|ref|YP_979466.1| - 1.8e-110 369.9 3.7 2.5e-110 369.4 3.7 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|121639242|ref|YP_979466.1| - 1.1e-43 148.3 0.2 1.9e-43 147.5 0.2 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|121639242|ref|YP_979466.1| - 1.9e-05 24.0 1.8 0.05 12.8 0.2 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|121639242|ref|YP_979466.1| - 6.5e-05 22.3 0.7 0.085 12.1 0.1 2.9 3 0 0 3 3 3 2 Thi4 family DAO PF01266.24 gi|121639242|ref|YP_979466.1| - 0.00082 19.1 1.4 0.0042 16.7 1.4 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121639242|ref|YP_979466.1| - 0.003 16.3 1.7 0.12 11.1 0.7 2.8 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 gi|121639242|ref|YP_979466.1| - 0.088 12.1 0.2 0.14 11.4 0.2 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|121639242|ref|YP_979466.1| - 0.092 12.0 0.6 0.2 10.9 0.6 1.5 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.22 gi|121639242|ref|YP_979466.1| - 4.3 6.3 6.9 2.3 7.2 2.2 2.3 2 0 0 2 2 2 0 Glucose inhibited division protein A Fer2_3 PF13085.6 gi|121639243|ref|YP_979467.1| - 5.1e-30 103.7 0.0 1.4e-29 102.3 0.0 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|121639243|ref|YP_979467.1| - 3.5e-11 43.4 2.8 6.5e-11 42.5 2.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|121639243|ref|YP_979467.1| - 3.5e-10 39.8 4.0 5.8e-10 39.1 4.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|121639243|ref|YP_979467.1| - 8.2e-06 26.3 2.4 1.6e-05 25.4 2.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|121639243|ref|YP_979467.1| - 0.0016 18.6 6.4 0.0016 18.6 6.4 2.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|121639243|ref|YP_979467.1| - 0.0027 17.9 1.0 0.63 10.3 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|121639243|ref|YP_979467.1| - 0.014 15.9 11.9 0.11 13.2 10.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|121639243|ref|YP_979467.1| - 0.041 14.6 4.1 0.74 10.6 0.5 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.27 gi|121639243|ref|YP_979467.1| - 0.058 13.2 9.5 0.13 12.1 5.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|121639243|ref|YP_979467.1| - 0.18 12.4 10.5 0.62 10.7 4.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|121639243|ref|YP_979467.1| - 0.83 9.4 9.5 1.6 8.5 0.3 2.5 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 gi|121639243|ref|YP_979467.1| - 2.9 9.0 14.4 7.3 7.8 0.2 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|121639243|ref|YP_979467.1| - 2.9 8.2 17.1 0.56 10.4 7.6 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain PIN PF01850.21 gi|121639244|ref|YP_979468.1| - 5.5e-10 39.8 0.1 7.4e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 PIN domain DUF4411 PF14367.6 gi|121639244|ref|YP_979468.1| - 0.045 13.7 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) RHH_1 PF01402.21 gi|121639245|ref|YP_979469.1| - 0.0009 19.1 1.3 0.0009 19.1 1.3 1.7 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family DUF4129 PF13559.6 gi|121639245|ref|YP_979469.1| - 0.024 14.9 0.6 0.032 14.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4129) Methyltransf_25 PF13649.6 gi|121639246|ref|YP_979470.1| - 8.3e-08 32.8 0.1 1.4e-07 32.1 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121639246|ref|YP_979470.1| - 0.0011 19.6 0.0 0.0019 18.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|121639246|ref|YP_979470.1| - 0.078 12.5 0.0 0.099 12.2 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase TPMT PF05724.11 gi|121639246|ref|YP_979470.1| - 0.11 12.1 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MoaE PF02391.17 gi|121639247|ref|YP_979471.1| - 4.2e-37 126.9 0.2 8.8e-37 125.8 0.1 1.5 2 0 0 2 2 2 1 MoaE protein ThiS PF02597.20 gi|121639247|ref|YP_979471.1| - 1.8e-18 66.9 0.1 1.1e-17 64.5 0.0 2.2 3 0 0 3 3 3 1 ThiS family Attacin_N PF03768.15 gi|121639247|ref|YP_979471.1| - 0.1 12.7 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 Attacin, N-terminal region MoaC PF01967.21 gi|121639248|ref|YP_979472.1| - 1e-53 181.0 6.0 1.2e-53 180.8 6.0 1.0 1 0 0 1 1 1 1 MoaC family DUF4402 PF14352.6 gi|121639248|ref|YP_979472.1| - 0.07 13.8 0.6 0.11 13.1 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4402) Pterin_4a PF01329.19 gi|121639249|ref|YP_979473.1| - 3.2e-21 75.3 0.0 3.8e-21 75.0 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase Mob_synth_C PF06463.13 gi|121639250|ref|YP_979474.1| - 4.2e-32 110.8 0.0 6.5e-32 110.1 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 gi|121639250|ref|YP_979474.1| - 4.3e-28 98.8 0.0 6.2e-28 98.3 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|121639250|ref|YP_979474.1| - 6.1e-06 26.4 0.0 1.4e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|121639250|ref|YP_979474.1| - 6.1e-06 26.5 0.0 1.1e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain BTAD PF03704.17 gi|121639253|ref|YP_979477.1| - 2.2e-44 151.5 3.7 3.2e-44 150.9 3.7 1.3 1 0 0 1 1 1 1 Bacterial transcriptional activator domain FHA PF00498.26 gi|121639253|ref|YP_979477.1| - 2.4e-17 63.0 0.1 4.1e-17 62.3 0.1 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|121639253|ref|YP_979477.1| - 2.1e-14 53.6 0.0 4.3e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Trans_reg_C PF00486.28 gi|121639253|ref|YP_979477.1| - 3.4e-12 46.3 0.0 7.8e-12 45.1 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal TPR_14 PF13428.6 gi|121639253|ref|YP_979477.1| - 0.0088 16.8 10.7 0.038 14.8 0.4 4.3 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|121639253|ref|YP_979477.1| - 0.42 11.2 4.1 2.9 8.5 0.2 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|121639253|ref|YP_979477.1| - 1 10.2 9.6 51 4.9 0.0 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat Condensation PF00668.20 gi|121639254|ref|YP_979478.1| - 0.00024 19.9 0.0 0.036 12.8 0.0 2.0 2 0 0 2 2 2 2 Condensation domain DEDD_Tnp_IS110 PF01548.17 gi|121639255|ref|YP_979479.1| - 1.4e-24 86.7 0.4 4.1e-24 85.2 0.4 1.9 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.16 gi|121639255|ref|YP_979479.1| - 1.2e-20 73.6 0.3 3.7e-20 72.0 0.3 1.9 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family CMD PF02627.20 gi|121639255|ref|YP_979479.1| - 0.00025 21.0 0.0 0.0013 18.7 0.0 2.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Sigma70_r2 PF04542.14 gi|121639256|ref|YP_979480.1| - 2.9e-13 49.4 0.7 9.7e-13 47.7 0.7 1.8 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639256|ref|YP_979480.1| - 4.9e-11 42.1 0.1 7.4e-11 41.6 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_2 PF12680.7 gi|121639256|ref|YP_979480.1| - 2.9e-07 31.1 1.7 5.5e-07 30.2 0.0 2.3 2 1 0 2 2 2 1 SnoaL-like domain Sigma70_r4 PF04545.16 gi|121639256|ref|YP_979480.1| - 1.5e-05 24.4 0.0 3.1e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 DUF4440 PF14534.6 gi|121639256|ref|YP_979480.1| - 0.0039 17.6 0.0 0.012 16.0 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 gi|121639256|ref|YP_979480.1| - 0.13 12.6 0.0 0.34 11.2 0.0 1.7 1 0 0 1 1 1 0 SnoaL-like domain Aminotran_3 PF00202.21 gi|121639257|ref|YP_979481.1| - 2.8e-93 312.8 0.0 3.5e-93 312.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|121639257|ref|YP_979481.1| - 0.031 13.6 0.0 0.044 13.0 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase Peptidase_S11 PF00768.20 gi|121639258|ref|YP_979482.1| - 7e-36 123.9 0.0 9.3e-36 123.5 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 gi|121639258|ref|YP_979482.1| - 1.3e-09 38.0 0.0 1.6e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 gi|121639258|ref|YP_979482.1| - 0.055 12.2 0.1 0.1 11.3 0.1 1.3 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family Sugar_tr PF00083.24 gi|121639259|ref|YP_979483.1| - 1.9e-85 287.4 23.0 2.2e-85 287.2 23.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|121639259|ref|YP_979483.1| - 1.1e-34 120.0 64.9 3.7e-33 114.9 38.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TraD PF06412.11 gi|121639259|ref|YP_979483.1| - 0.14 11.9 0.9 0.76 9.6 0.1 2.6 2 0 0 2 2 2 0 Conjugal transfer protein TraD OATP PF03137.20 gi|121639259|ref|YP_979483.1| - 8.2 4.6 8.0 3.4 5.9 3.1 2.2 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Amidohydro_1 PF01979.20 gi|121639260|ref|YP_979484.1| - 2.8e-39 135.4 6.0 3.6e-39 135.1 6.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|121639260|ref|YP_979484.1| - 7.1e-09 35.6 11.1 5.6e-07 29.4 0.5 2.9 2 1 0 3 3 3 2 Amidohydrolase family 2CSK_N PF08521.10 gi|121639260|ref|YP_979484.1| - 0.04 14.0 1.0 10 6.2 0.0 2.8 2 0 0 2 2 2 0 Two-component sensor kinase N-terminal DUF732 PF05305.14 gi|121639261|ref|YP_979485.1| - 9.1e-24 83.7 0.0 2.2e-23 82.5 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF732) MerR-DNA-bind PF09278.11 gi|121639263|ref|YP_979487.1| - 1.1e-18 67.5 4.9 1.5e-18 67.0 4.9 1.2 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 gi|121639263|ref|YP_979487.1| - 1.3e-18 66.8 0.0 2.3e-18 66.0 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 gi|121639263|ref|YP_979487.1| - 4.8e-16 58.2 0.1 8e-16 57.5 0.1 1.4 1 0 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 gi|121639263|ref|YP_979487.1| - 0.14 12.3 0.0 0.5 10.6 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain SNCAIP_SNCA_bd PF16700.5 gi|121639263|ref|YP_979487.1| - 0.36 10.6 1.2 0.53 10.0 0.1 1.8 2 1 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain Virul_fac_BrkB PF03631.15 gi|121639264|ref|YP_979488.1| - 2.7e-39 135.3 26.5 3.1e-39 135.2 26.5 1.0 1 0 0 1 1 1 1 Virulence factor BrkB tRNA-synt_1b PF00579.25 gi|121639265|ref|YP_979489.1| - 3.4e-81 272.8 0.0 4.1e-81 272.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Eno-Rase_NADH_b PF12242.8 gi|121639265|ref|YP_979489.1| - 0.025 14.4 0.0 0.058 13.2 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Abhydrolase_6 PF12697.7 gi|121639266|ref|YP_979490.1| - 1.3e-15 58.7 8.7 1.5e-15 58.4 8.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639266|ref|YP_979490.1| - 1.4e-12 47.9 0.0 2e-11 44.1 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639266|ref|YP_979490.1| - 5e-06 25.9 0.0 9.7e-06 25.0 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 UPF0227 PF05728.12 gi|121639266|ref|YP_979490.1| - 0.0059 16.6 0.0 0.017 15.1 0.0 1.6 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0227) Thioesterase PF00975.20 gi|121639266|ref|YP_979490.1| - 0.17 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Iso_dh PF00180.20 gi|121639267|ref|YP_979491.1| - 3.6e-73 246.7 0.0 4.2e-73 246.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Cys_Met_Meta_PP PF01053.20 gi|121639268|ref|YP_979492.1| - 6.3e-137 456.2 0.0 7.3e-137 456.0 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|121639268|ref|YP_979492.1| - 0.00041 19.4 0.0 0.00077 18.5 0.0 1.5 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|121639268|ref|YP_979492.1| - 0.012 15.0 0.0 0.64 9.2 0.0 2.2 2 0 0 2 2 2 0 Beta-eliminating lyase MccV PF17508.2 gi|121639268|ref|YP_979492.1| - 0.8 10.3 2.7 9.9 6.8 0.2 2.8 3 0 0 3 3 3 0 Microcin V bacteriocin Abhydrolase_1 PF00561.20 gi|121639269|ref|YP_979493.1| - 6.7e-29 101.3 0.0 7.8e-29 101.1 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639269|ref|YP_979493.1| - 0.011 15.0 0.0 0.018 14.3 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF4884 PF16225.5 gi|121639269|ref|YP_979493.1| - 0.21 11.7 0.0 0.48 10.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Methyltransf_11 PF08241.12 gi|121639270|ref|YP_979494.1| - 9.2e-22 77.5 0.0 1.9e-21 76.5 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121639270|ref|YP_979494.1| - 2.8e-18 66.4 0.0 2.4e-17 63.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121639270|ref|YP_979494.1| - 1.1e-10 42.2 0.0 7.3e-10 39.5 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121639270|ref|YP_979494.1| - 1.4e-08 34.7 0.0 3.2e-08 33.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639270|ref|YP_979494.1| - 4.9e-07 29.7 0.0 7.2e-07 29.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121639270|ref|YP_979494.1| - 5.1e-07 29.3 0.0 7.8e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|121639270|ref|YP_979494.1| - 0.00052 19.9 0.0 0.0013 18.6 0.0 1.5 1 1 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 gi|121639270|ref|YP_979494.1| - 0.0019 17.8 0.0 0.036 13.6 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|121639270|ref|YP_979494.1| - 0.0048 16.0 0.0 0.0069 15.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|121639270|ref|YP_979494.1| - 0.032 14.0 0.0 0.063 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_29 PF03141.16 gi|121639270|ref|YP_979494.1| - 0.042 12.4 0.0 0.052 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_PK PF05891.12 gi|121639270|ref|YP_979494.1| - 0.11 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase DREV PF05219.12 gi|121639270|ref|YP_979494.1| - 0.23 10.5 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase Pentapeptide_2 PF01469.18 gi|121639271|ref|YP_979495.1| - 3.3e-89 292.5 416.2 8.2e-11 41.6 18.7 17.6 15 2 2 17 17 17 14 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121639271|ref|YP_979495.1| - 2.3e-59 200.0 20.2 2.3e-59 200.0 20.2 1.7 2 0 0 2 2 2 1 PPE family PE PF00934.20 gi|121639272|ref|YP_979496.1| - 7.6e-33 112.7 20.9 1.3e-32 112.0 20.9 1.3 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121639272|ref|YP_979496.1| - 0.087 13.3 12.2 0.16 12.5 12.2 1.4 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm DUF3017 PF11222.8 gi|121639273|ref|YP_979497.1| - 1.8e-19 69.8 9.2 1.8e-19 69.8 9.2 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3017) DUF2109 PF09882.9 gi|121639273|ref|YP_979497.1| - 0.23 11.5 2.5 35 4.5 0.0 2.9 2 1 1 3 3 3 0 Predicted membrane protein (DUF2109) Pentapeptide_2 PF01469.18 gi|121639274|ref|YP_979498.1| - 4.5e-135 439.3 723.5 9e-10 38.3 24.0 29.3 24 5 7 32 32 32 27 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121639274|ref|YP_979498.1| - 1.6e-53 181.0 35.1 2.9e-53 180.2 35.1 1.4 1 0 0 1 1 1 1 PPE family DEDD_Tnp_IS110 PF01548.17 gi|121639275|ref|YP_979499.1| - 6.8e-14 52.0 0.0 8.2e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Transposase DDE_Tnp_ISL3 PF01610.17 gi|121639276|ref|YP_979500.1| - 1.8e-18 67.2 0.0 2.1e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 Transposase PPE PF00823.19 gi|121639277|ref|YP_979501.1| - 8.9e-57 191.6 29.0 1.3e-56 191.1 29.0 1.2 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121639277|ref|YP_979501.1| - 1.7e-42 143.0 187.4 1.2e-10 41.1 20.1 6.6 4 2 2 6 6 6 6 Pentapeptide repeats (8 copies) BBE PF08031.12 gi|121639278|ref|YP_979502.1| - 3.8e-07 30.1 0.1 6.7e-07 29.3 0.1 1.4 1 0 0 1 1 1 1 Berberine and berberine like Cytokin-bind PF09265.10 gi|121639278|ref|YP_979502.1| - 0.077 12.4 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding FAD_binding_4 PF01565.23 gi|121639279|ref|YP_979503.1| - 1.8e-08 34.2 1.1 2.6e-08 33.7 1.1 1.3 1 0 0 1 1 1 1 FAD binding domain DUF732 PF05305.14 gi|121639281|ref|YP_979505.1| - 3.9e-24 84.8 7.2 4.7e-24 84.6 7.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF732) DUF3017 PF11222.8 gi|121639282|ref|YP_979506.1| - 5.9e-22 77.7 13.9 5.9e-22 77.7 13.9 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3017) DUF2628 PF10947.8 gi|121639282|ref|YP_979506.1| - 0.82 10.1 4.2 1.2 9.6 4.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) THF_DHG_CYH_C PF02882.19 gi|121639283|ref|YP_979507.1| - 3.1e-60 202.1 0.2 4.8e-60 201.5 0.2 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|121639283|ref|YP_979507.1| - 1.7e-33 115.3 0.0 2.3e-33 114.9 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PhdYeFM_antitox PF02604.19 gi|121639284|ref|YP_979508.1| - 4.5e-20 71.2 0.1 6e-20 70.8 0.1 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system PHD_like PF12910.7 gi|121639284|ref|YP_979508.1| - 0.034 14.2 0.0 0.037 14.1 0.0 1.3 1 1 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Imm31 PF15591.6 gi|121639284|ref|YP_979508.1| - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 31 ArlS_N PF18719.1 gi|121639284|ref|YP_979508.1| - 0.15 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 ArlS sensor domain YoeB_toxin PF06769.14 gi|121639285|ref|YP_979509.1| - 1.1e-39 134.3 0.1 1.2e-39 134.2 0.1 1.0 1 0 0 1 1 1 1 YoeB-like toxin of bacterial type II toxin-antitoxin system ParE_toxin PF05016.15 gi|121639285|ref|YP_979509.1| - 0.0045 17.6 0.0 0.0054 17.3 0.0 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE HigB-like_toxin PF05015.13 gi|121639285|ref|YP_979509.1| - 0.14 12.6 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB Oxidored_FMN PF00724.20 gi|121639286|ref|YP_979510.1| - 1.7e-47 162.4 0.0 3.5e-41 141.6 0.0 2.0 2 0 0 2 2 2 2 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 gi|121639286|ref|YP_979510.1| - 0.00021 20.5 1.3 0.14 11.2 0.0 2.9 2 1 1 3 3 3 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|121639286|ref|YP_979510.1| - 0.12 11.8 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein FHA PF00498.26 gi|121639287|ref|YP_979511.1| - 1.9e-10 41.0 0.1 2.8e-10 40.4 0.1 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|121639287|ref|YP_979511.1| - 2.8e-09 37.1 0.0 4.3e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Pentapeptide PF00805.22 gi|121639288|ref|YP_979512.1| - 2.7e-22 78.0 29.8 7.4e-09 35.1 0.4 4.5 1 1 5 6 6 6 6 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|121639288|ref|YP_979512.1| - 3.9e-20 71.8 0.1 6.9e-11 42.2 0.4 3.1 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|121639288|ref|YP_979512.1| - 9.5e-14 51.3 11.3 8.1e-06 25.9 4.3 4.4 2 1 3 5 5 5 4 Pentapeptide repeats (9 copies) Zap1_zf2 PF18217.1 gi|121639288|ref|YP_979512.1| - 0.13 12.2 4.6 0.25 11.4 0.3 3.1 3 0 0 3 3 3 0 Zap1 zinc finger 2 ATP_bind_1 PF03029.17 gi|121639289|ref|YP_979513.1| - 1.2e-29 103.8 0.2 4.3e-28 98.7 0.2 2.5 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|121639289|ref|YP_979513.1| - 8.1e-05 22.2 0.0 0.0001 21.9 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain T2SSE PF00437.20 gi|121639289|ref|YP_979513.1| - 0.0048 16.0 0.4 0.0072 15.4 0.4 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|121639289|ref|YP_979513.1| - 0.02 14.6 0.3 0.036 13.8 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|121639289|ref|YP_979513.1| - 0.029 14.1 0.1 0.04 13.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain Ras PF00071.22 gi|121639289|ref|YP_979513.1| - 0.043 13.4 0.1 0.25 10.9 0.1 1.9 1 1 0 1 1 1 0 Ras family TsaE PF02367.17 gi|121639289|ref|YP_979513.1| - 0.097 12.7 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|121639289|ref|YP_979513.1| - 0.13 12.5 0.1 0.2 11.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF742 PF05331.11 gi|121639290|ref|YP_979514.1| - 2.8e-35 120.6 0.3 3.1e-35 120.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_IclR PF09339.10 gi|121639290|ref|YP_979514.1| - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|121639290|ref|YP_979514.1| - 0.041 13.8 0.5 0.069 13.0 0.2 1.6 2 0 0 2 2 2 0 MarR family Robl_LC7 PF03259.17 gi|121639291|ref|YP_979515.1| - 1.9e-22 78.8 0.9 2.6e-22 78.4 0.9 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain HATPase_c PF02518.26 gi|121639292|ref|YP_979516.1| - 1.2e-08 35.5 0.0 2.6e-08 34.4 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|121639292|ref|YP_979516.1| - 1.1e-05 25.7 0.2 5.9e-05 23.4 0.2 2.3 1 1 0 1 1 1 1 HAMP domain ATPgrasp_N PF18130.1 gi|121639292|ref|YP_979516.1| - 0.051 14.1 0.0 0.2 12.2 0.0 2.0 1 0 0 1 1 1 0 ATP-grasp N-terminal domain SpoU_methylase PF00588.19 gi|121639293|ref|YP_979517.1| - 7.8e-30 103.9 0.0 8.7e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family PE PF00934.20 gi|121639294|ref|YP_979518.1| - 4.3e-33 113.5 21.2 7e-33 112.8 21.2 1.4 1 0 0 1 1 1 1 PE family Nitroreductase PF00881.24 gi|121639295|ref|YP_979519.1| - 3.7e-23 82.4 0.0 5e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|121639295|ref|YP_979519.1| - 0.00095 18.8 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 2 Putative TM nitroreductase Putative_PNPOx PF01243.20 gi|121639296|ref|YP_979520.1| - 4.4e-12 46.0 0.0 6.2e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DNA_pol3_alpha PF07733.12 gi|121639297|ref|YP_979521.1| - 4e-78 262.6 0.0 8.3e-78 261.5 0.0 1.6 1 1 0 1 1 1 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 gi|121639297|ref|YP_979521.1| - 1.1e-55 187.4 0.0 1.9e-55 186.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain PHP PF02811.19 gi|121639297|ref|YP_979521.1| - 2.2e-30 106.2 0.0 3.7e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 PHP domain HHH_6 PF14579.6 gi|121639297|ref|YP_979521.1| - 2.9e-26 91.5 0.0 2.4e-25 88.6 0.0 2.5 3 0 0 3 3 3 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 gi|121639297|ref|YP_979521.1| - 3e-05 23.9 0.0 7.5e-05 22.6 0.0 1.7 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain HHH_3 PF12836.7 gi|121639297|ref|YP_979521.1| - 0.00011 22.3 0.0 0.00032 20.9 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HTH_Tnp_1 PF01527.20 gi|121639297|ref|YP_979521.1| - 0.058 13.7 0.0 0.18 12.1 0.0 1.9 1 0 0 1 1 1 0 Transposase SnoaL_2 PF12680.7 gi|121639297|ref|YP_979521.1| - 0.18 12.5 1.6 12 6.7 0.0 3.8 3 1 0 3 3 3 0 SnoaL-like domain WES_acyltransf PF03007.16 gi|121639298|ref|YP_979522.1| - 8.4e-42 143.7 2.3 1.3e-40 139.9 2.3 2.4 1 1 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639298|ref|YP_979522.1| - 1.3e-15 57.6 0.0 2.6e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Trehalose_PPase PF02358.16 gi|121639299|ref|YP_979523.1| - 1.7e-72 243.4 0.0 2.2e-72 243.0 0.0 1.2 1 0 0 1 1 1 1 Trehalose-phosphatase ECH_1 PF00378.20 gi|121639300|ref|YP_979524.1| - 4.8e-51 173.5 0.1 5.7e-51 173.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121639300|ref|YP_979524.1| - 6.9e-28 98.1 0.5 8.8e-28 97.8 0.5 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Amidase PF01425.21 gi|121639301|ref|YP_979525.1| - 1.8e-115 386.5 0.2 2.1e-115 386.3 0.2 1.0 1 0 0 1 1 1 1 Amidase Hydrolase PF00702.26 gi|121639302|ref|YP_979526.1| - 2.9e-14 53.8 0.1 3.4e-13 50.4 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|121639302|ref|YP_979526.1| - 6.7e-13 49.1 0.0 1.5e-12 48.0 0.0 1.7 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121639302|ref|YP_979526.1| - 0.00019 21.4 0.0 0.00032 20.7 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|121639302|ref|YP_979526.1| - 0.0022 18.1 0.0 0.032 14.3 0.0 2.7 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 gi|121639302|ref|YP_979526.1| - 0.006 16.4 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Acid Phosphatase HTH_AsnC-type PF13404.6 gi|121639302|ref|YP_979526.1| - 0.075 12.9 0.0 0.19 11.6 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain SQHop_cyclase_C PF13243.6 gi|121639303|ref|YP_979527.1| - 8.6e-06 25.1 0.0 0.023 13.8 0.0 2.5 2 0 0 2 2 2 2 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 gi|121639303|ref|YP_979527.1| - 8.8e-05 21.7 0.0 0.51 9.4 0.0 2.7 3 0 0 3 3 3 2 Squalene-hopene cyclase N-terminal domain Prenyltrans PF00432.21 gi|121639303|ref|YP_979527.1| - 0.00083 19.1 0.2 0.019 14.7 0.2 3.1 3 0 0 3 3 3 1 Prenyltransferase and squalene oxidase repeat Prenyltransf PF01255.19 gi|121639304|ref|YP_979528.1| - 0.0019 17.7 0.0 0.0022 17.6 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DXP_synthase_N PF13292.6 gi|229576790|ref|YP_979529.2| - 1.7e-88 296.4 0.0 2.3e-76 256.6 0.0 2.4 2 1 1 3 3 3 2 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 gi|229576790|ref|YP_979529.2| - 6.4e-36 123.7 0.0 2.1e-35 122.0 0.0 1.9 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|229576790|ref|YP_979529.2| - 2.1e-23 82.5 0.0 4.8e-23 81.4 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 gi|229576790|ref|YP_979529.2| - 9.2e-06 25.5 0.0 3.8e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFOR_II PF17147.4 gi|229576790|ref|YP_979529.2| - 0.052 13.9 0.0 0.16 12.3 0.0 1.9 2 0 0 2 2 2 0 Pyruvate:ferredoxin oxidoreductase core domain II E1_dh PF00676.20 gi|229576790|ref|YP_979529.2| - 0.067 12.1 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component LYTB PF02401.18 gi|121639306|ref|YP_979530.1| - 3.3e-85 285.5 0.0 3.8e-85 285.3 0.0 1.0 1 0 0 1 1 1 1 LytB protein DUF2325 PF10087.9 gi|121639306|ref|YP_979530.1| - 0.074 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) TPP_enzyme_M PF00205.22 gi|121639306|ref|YP_979530.1| - 0.087 12.6 0.0 4.9 6.9 0.0 2.4 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain polyprenyl_synt PF00348.17 gi|121639307|ref|YP_979531.1| - 2e-58 197.5 0.0 2.6e-58 197.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase PIN PF01850.21 gi|121639308|ref|YP_979532.1| - 5.5e-15 55.9 0.3 6.3e-15 55.8 0.3 1.0 1 0 0 1 1 1 1 PIN domain ALF PF03752.13 gi|121639308|ref|YP_979532.1| - 0.057 13.4 0.6 0.75 9.8 0.6 2.3 2 0 0 2 2 2 0 Short repeats of unknown function PhdYeFM_antitox PF02604.19 gi|121639309|ref|YP_979533.1| - 7e-11 41.8 0.0 8.9e-11 41.5 0.0 1.2 1 0 0 1 1 1 1 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF772 PF05598.11 gi|121639310|ref|YP_979534.1| - 3e-15 56.0 0.1 5.8e-15 55.1 0.1 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|121639311|ref|YP_979535.1| - 5e-08 32.9 0.5 1.7e-07 31.1 0.1 2.0 1 1 1 2 2 2 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|121639311|ref|YP_979535.1| - 0.00034 20.8 1.0 0.00036 20.7 0.1 1.5 2 0 0 2 2 2 1 Transposase DDE domain PE PF00934.20 gi|121639312|ref|YP_979536.1| - 1.9e-34 117.8 17.5 3.4e-34 117.0 17.5 1.4 1 0 0 1 1 1 1 PE family MaoC_dehydratas PF01575.19 gi|121639313|ref|YP_979537.1| - 4.8e-33 113.3 0.0 8.5e-33 112.5 0.0 1.3 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121639313|ref|YP_979537.1| - 9.3e-08 32.3 0.0 2.6e-07 30.9 0.0 1.7 2 1 0 2 2 2 1 N-terminal half of MaoC dehydratase His_Phos_1 PF00300.22 gi|121639314|ref|YP_979538.1| - 2.7e-21 76.2 0.0 3.2e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) adh_short PF00106.25 gi|121639315|ref|YP_979539.1| - 1.1e-50 171.9 0.1 1.1e-46 158.7 0.1 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639315|ref|YP_979539.1| - 3.4e-36 125.0 2.2 1e-33 116.9 1.0 2.3 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase NAD_binding_4 PF07993.12 gi|121639315|ref|YP_979539.1| - 3.5e-30 105.0 0.0 9.8e-29 100.3 0.0 2.8 2 1 0 2 2 2 1 Male sterility protein KR PF08659.10 gi|121639315|ref|YP_979539.1| - 2.8e-22 79.5 1.8 1.9e-14 54.0 0.4 2.3 2 0 0 2 2 2 2 KR domain Epimerase PF01370.21 gi|121639315|ref|YP_979539.1| - 1.2e-19 70.8 0.4 1.6e-13 50.7 0.0 2.7 2 1 0 2 2 2 2 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|121639315|ref|YP_979539.1| - 1.7e-15 57.4 2.5 1.3e-09 38.3 0.0 2.4 2 0 0 2 2 2 2 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 gi|121639315|ref|YP_979539.1| - 1.6e-09 37.6 0.1 1.4e-06 28.0 0.0 2.2 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121639315|ref|YP_979539.1| - 6.7e-05 22.0 0.0 0.00022 20.4 0.0 1.8 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 gi|121639315|ref|YP_979539.1| - 7.9e-05 22.3 1.1 0.21 11.1 0.5 2.3 2 0 0 2 2 2 2 NmrA-like family RmlD_sub_bind PF04321.17 gi|121639315|ref|YP_979539.1| - 0.00015 21.0 0.3 0.81 8.7 0.0 3.2 2 1 0 2 2 2 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|121639315|ref|YP_979539.1| - 0.00019 20.7 0.0 0.03 13.4 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein Eno-Rase_NADH_b PF12242.8 gi|121639315|ref|YP_979539.1| - 0.023 14.5 0.0 0.054 13.3 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase THF_DHG_CYH_C PF02882.19 gi|121639315|ref|YP_979539.1| - 0.11 11.8 0.0 0.23 10.8 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CMAS PF02353.20 gi|121639316|ref|YP_979540.1| - 1.4e-126 421.4 0.0 1.6e-126 421.2 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 gi|121639316|ref|YP_979540.1| - 9.3e-10 39.1 0.0 1.8e-09 38.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639316|ref|YP_979540.1| - 1.5e-08 34.7 0.0 2.4e-08 34.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121639316|ref|YP_979540.1| - 3.8e-08 33.9 0.0 7.9e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121639316|ref|YP_979540.1| - 1.6e-06 28.8 0.0 2.7e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|121639316|ref|YP_979540.1| - 0.0037 17.1 0.0 0.0063 16.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|121639316|ref|YP_979540.1| - 0.011 14.7 0.0 0.019 13.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) MTS PF05175.14 gi|121639316|ref|YP_979540.1| - 0.016 14.8 0.0 0.027 14.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain PCMT PF01135.19 gi|121639316|ref|YP_979540.1| - 0.022 14.5 0.0 0.031 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 gi|121639316|ref|YP_979540.1| - 0.16 11.6 0.1 0.29 10.7 0.1 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW IU_nuc_hydro PF01156.19 gi|121639317|ref|YP_979541.1| - 2.2e-73 247.5 0.0 2.5e-73 247.3 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase IMS PF00817.20 gi|121639318|ref|YP_979542.1| - 8.4e-11 42.1 0.1 1.5e-10 41.3 0.1 1.3 1 0 0 1 1 1 1 impB/mucB/samB family Ank_5 PF13857.6 gi|121639320|ref|YP_979544.1| - 0.0075 16.6 0.1 0.021 15.2 0.1 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) GMP_synt_C PF00958.22 gi|121639321|ref|YP_979545.1| - 9e-40 134.6 0.0 2e-39 133.5 0.0 1.6 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 gi|121639321|ref|YP_979545.1| - 2.4e-37 128.6 0.0 3.4e-37 128.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I NAD_synthase PF02540.17 gi|121639321|ref|YP_979545.1| - 2.2e-09 36.8 0.2 1.1e-05 24.7 0.1 2.2 2 0 0 2 2 2 2 NAD synthase Peptidase_C26 PF07722.13 gi|121639321|ref|YP_979545.1| - 3.7e-09 36.6 0.3 2.6e-08 33.9 0.3 2.3 1 1 0 1 1 1 1 Peptidase C26 tRNA_Me_trans PF03054.16 gi|121639321|ref|YP_979545.1| - 0.0022 16.9 0.1 0.0036 16.1 0.1 1.3 1 0 0 1 1 1 1 tRNA methyl transferase QueC PF06508.13 gi|121639321|ref|YP_979545.1| - 0.008 15.7 0.0 0.099 12.1 0.0 2.1 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|121639321|ref|YP_979545.1| - 0.015 14.9 0.0 0.04 13.5 0.0 1.7 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|121639321|ref|YP_979545.1| - 0.017 14.8 0.4 0.1 12.2 0.3 2.0 2 0 0 2 2 2 0 Asparagine synthase HHH_2 PF12826.7 gi|121639321|ref|YP_979545.1| - 0.097 12.8 0.0 0.35 11.0 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif ATP_bind_3 PF01171.20 gi|121639321|ref|YP_979545.1| - 0.14 11.9 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 PP-loop family DJ-1_PfpI PF01965.24 gi|121639321|ref|YP_979545.1| - 0.17 11.7 0.3 1.7 8.4 0.0 2.3 2 0 0 2 2 2 0 DJ-1/PfpI family SQS_PSY PF00494.19 gi|121639322|ref|YP_979546.1| - 1.2e-58 198.7 3.4 1.4e-58 198.5 3.4 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase TruB_C PF09142.11 gi|121639322|ref|YP_979546.1| - 0.027 14.3 0.5 0.1 12.4 0.5 1.9 1 0 0 1 1 1 0 tRNA Pseudouridine synthase II, C terminal MdcG PF10620.9 gi|121639322|ref|YP_979546.1| - 0.049 13.4 0.3 1.4 8.7 0.2 2.4 2 0 0 2 2 2 0 Phosphoribosyl-dephospho-CoA transferase MdcG polyprenyl_synt PF00348.17 gi|121639323|ref|YP_979547.1| - 1.5e-53 181.4 0.0 2e-53 181.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase CobU PF02283.16 gi|121639323|ref|YP_979547.1| - 0.017 14.7 0.0 0.034 13.7 0.0 1.4 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase LCM PF04072.14 gi|121639324|ref|YP_979548.1| - 2.3e-65 220.0 0.0 4.4e-65 219.2 0.0 1.4 2 0 0 2 2 2 1 Leucine carboxyl methyltransferase HAD_2 PF13419.6 gi|121639325|ref|YP_979549.1| - 1.1e-14 55.0 0.0 2.2e-14 54.0 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121639325|ref|YP_979549.1| - 9.2e-13 49.0 0.3 1.3e-12 48.5 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|121639325|ref|YP_979549.1| - 1e-05 25.5 0.3 2.1e-05 24.5 0.3 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|121639325|ref|YP_979549.1| - 0.0014 19.0 1.4 0.0068 16.8 1.4 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase TrkA_N PF02254.18 gi|121639325|ref|YP_979549.1| - 0.11 12.7 0.1 14 5.9 0.0 2.3 2 0 0 2 2 2 0 TrkA-N domain Hydrolase_6 PF13344.6 gi|121639325|ref|YP_979549.1| - 0.14 12.3 0.0 14 5.9 0.0 2.6 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase Glyco_hydro_65m PF03632.15 gi|121639326|ref|YP_979550.1| - 1.8e-142 474.8 0.4 2.2e-142 474.5 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 65 central catalytic domain Glyco_hydro_65N PF03636.15 gi|121639326|ref|YP_979550.1| - 6.2e-59 199.4 0.0 1.2e-58 198.4 0.0 1.5 2 0 0 2 2 2 1 Glycosyl hydrolase family 65, N-terminal domain Glyco_hydro_65C PF03633.15 gi|121639326|ref|YP_979550.1| - 2.7e-13 49.6 0.0 1e-12 47.8 0.0 2.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 65, C-terminal domain DegT_DnrJ_EryC1 PF01041.17 gi|121639327|ref|YP_979551.1| - 2.5e-78 263.9 0.0 2.9e-78 263.7 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family NAD_binding_9 PF13454.6 gi|121639328|ref|YP_979552.1| - 4.9e-10 39.6 0.0 1.8e-09 37.7 0.0 2.0 2 0 0 2 2 2 1 FAD-NAD(P)-binding BMFP PF04380.13 gi|121639328|ref|YP_979552.1| - 0.014 15.8 0.1 0.036 14.5 0.1 1.7 1 0 0 1 1 1 0 Membrane fusogenic activity Pyr_redox_2 PF07992.14 gi|121639328|ref|YP_979552.1| - 0.075 12.3 0.0 0.24 10.6 0.0 1.9 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase BCL_N PF04714.13 gi|121639328|ref|YP_979552.1| - 0.081 13.0 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 BCL7, N-terminal conserver region N_formyltrans_C PF18216.1 gi|121639329|ref|YP_979553.1| - 5.2e-18 64.4 0.7 1.8e-17 62.7 0.0 2.2 3 0 0 3 3 3 1 N-formyltransferase dimerization C-terminal domain Formyl_trans_N PF00551.19 gi|121639329|ref|YP_979553.1| - 2.4e-15 56.8 0.0 3.1e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase TetR_N PF00440.23 gi|121639330|ref|YP_979554.1| - 8.6e-18 63.9 0.0 8.9e-17 60.6 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TauD PF02668.16 gi|121639331|ref|YP_979555.1| - 6.9e-49 167.0 0.5 8.2e-49 166.8 0.5 1.0 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family PhdYeFM_antitox PF02604.19 gi|121639332|ref|YP_979556.1| - 1.5e-10 40.7 0.3 3e-10 39.7 0.2 1.6 1 1 1 2 2 2 1 Antitoxin Phd_YefM, type II toxin-antitoxin system Trm5_N PF18093.1 gi|121639332|ref|YP_979556.1| - 0.16 11.9 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 tRNA methyltransferase 5 N-terminal domain PIN PF01850.21 gi|121639333|ref|YP_979557.1| - 1.9e-13 51.0 0.0 2.3e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 PIN domain GMC_oxred_C PF05199.13 gi|121639334|ref|YP_979558.1| - 4.9e-13 49.8 0.0 9.1e-13 48.9 0.0 1.5 1 1 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|121639334|ref|YP_979558.1| - 1.2e-12 48.2 0.1 1.5e-05 24.8 0.0 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 gi|121639334|ref|YP_979558.1| - 5.2e-09 35.9 0.1 0.00045 19.7 0.1 2.2 2 0 0 2 2 2 2 GMC oxidoreductase FAD_binding_2 PF00890.24 gi|121639334|ref|YP_979558.1| - 3.8e-07 29.5 0.0 0.00016 20.9 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|121639334|ref|YP_979558.1| - 4.8e-06 26.7 0.1 5e-05 23.5 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|121639334|ref|YP_979558.1| - 7.7e-05 22.1 0.0 0.00042 19.6 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|121639334|ref|YP_979558.1| - 0.00086 18.6 0.0 0.0049 16.2 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|121639334|ref|YP_979558.1| - 0.032 14.8 0.1 0.25 11.9 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121639334|ref|YP_979558.1| - 0.061 12.0 0.0 0.42 9.3 0.0 2.0 2 0 0 2 2 2 0 HI0933-like protein IMPDH PF00478.25 gi|121639335|ref|YP_979559.1| - 2e-32 112.5 1.4 2.8e-31 108.8 0.5 2.0 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|121639335|ref|YP_979559.1| - 1.2e-08 34.4 4.6 1.2e-08 34.4 4.6 1.6 2 0 0 2 2 2 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|121639335|ref|YP_979559.1| - 0.00077 18.7 1.2 0.0012 18.0 1.2 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase NMO PF03060.15 gi|121639335|ref|YP_979559.1| - 0.0011 18.4 12.0 0.014 14.8 2.1 3.0 2 1 1 3 3 3 2 Nitronate monooxygenase NanE PF04131.14 gi|121639335|ref|YP_979559.1| - 0.0038 16.4 0.4 0.12 11.5 0.0 2.3 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|121639335|ref|YP_979559.1| - 0.023 14.0 7.1 0.89 8.8 1.1 2.5 1 1 0 2 2 2 0 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|121639336|ref|YP_979560.1| - 9.5e-152 504.9 8.0 1.1e-151 504.7 8.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|121639336|ref|YP_979560.1| - 9.6e-21 74.0 0.3 2.9e-09 37.2 0.1 2.9 2 0 0 2 2 2 2 CBS domain NMO PF03060.15 gi|121639336|ref|YP_979560.1| - 1.8e-08 34.2 15.4 0.00035 20.0 11.7 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.18 gi|121639336|ref|YP_979560.1| - 3.2e-06 26.4 11.7 9.8e-06 24.8 11.1 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|121639336|ref|YP_979560.1| - 0.00025 20.6 2.9 0.31 10.5 0.1 2.3 2 0 0 2 2 2 2 Histidine biosynthesis protein Glu_synthase PF01645.17 gi|121639336|ref|YP_979560.1| - 0.077 12.1 7.2 0.14 11.3 7.2 1.4 1 0 0 1 1 1 0 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|121639336|ref|YP_979560.1| - 1.3 8.2 5.5 0.81 8.8 0.9 2.1 1 1 1 2 2 2 0 Dihydroorotate dehydrogenase DUF5319 PF17252.2 gi|121639337|ref|YP_979561.1| - 3.2e-50 169.4 1.7 3.7e-50 169.2 1.7 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5319) RsdA_SigD_bd PF16751.5 gi|121639338|ref|YP_979562.1| - 1.3e-17 63.7 11.3 3.4e-17 62.4 11.3 1.8 1 0 0 1 1 1 1 Anti-sigma-D factor RsdA to sigma factor binding region Chibby PF14645.6 gi|121639338|ref|YP_979562.1| - 0.28 11.6 1.4 0.61 10.5 0.2 1.9 2 0 0 2 2 2 0 Chibby family Sigma70_r2 PF04542.14 gi|121639339|ref|YP_979563.1| - 2.7e-13 49.5 1.0 4.8e-13 48.7 0.2 1.8 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639339|ref|YP_979563.1| - 3e-10 39.6 0.5 3e-10 39.6 0.5 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|121639339|ref|YP_979563.1| - 4.8e-10 38.8 0.6 1e-09 37.8 0.6 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121639339|ref|YP_979563.1| - 0.00043 20.2 0.1 0.00074 19.5 0.1 1.3 1 1 0 1 1 1 1 ECF sigma factor HTH_16 PF12645.7 gi|121639339|ref|YP_979563.1| - 0.00053 20.0 0.0 0.00086 19.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TPR_12 PF13424.6 gi|121639340|ref|YP_979564.1| - 2.1 8.7 21.6 0.21 11.9 6.1 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat Whib PF02467.16 gi|121639341|ref|YP_979565.1| - 6.8e-25 87.5 1.4 8.3e-25 87.2 1.4 1.1 1 0 0 1 1 1 1 Transcription factor WhiB Cpn60_TCP1 PF00118.24 gi|121639342|ref|YP_979566.1| - 1.6e-87 294.2 9.4 4.7e-87 292.7 9.4 1.6 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family Cpn10 PF00166.21 gi|121639343|ref|YP_979567.1| - 5.9e-35 119.2 0.2 6.5e-35 119.1 0.2 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Peptidase_M22 PF00814.25 gi|121639344|ref|YP_979568.1| - 3.3e-86 289.4 0.4 3.8e-86 289.2 0.4 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|121639344|ref|YP_979568.1| - 0.00044 20.0 0.0 0.00064 19.5 0.0 1.2 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus Acetyltransf_1 PF00583.25 gi|121639345|ref|YP_979569.1| - 2.7e-21 76.0 0.0 3.3e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|121639345|ref|YP_979569.1| - 7.4e-16 58.2 0.0 8.5e-16 58.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|121639345|ref|YP_979569.1| - 7.1e-13 48.8 0.1 1e-12 48.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|121639345|ref|YP_979569.1| - 4.3e-06 26.6 0.1 5.8e-06 26.2 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|121639345|ref|YP_979569.1| - 4.6e-05 23.5 0.0 8.5e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|121639345|ref|YP_979569.1| - 8.8e-05 22.6 0.0 0.00041 20.4 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|121639345|ref|YP_979569.1| - 0.00014 21.6 0.0 0.00023 20.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|121639345|ref|YP_979569.1| - 0.00022 21.9 0.0 0.00026 21.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 gi|121639345|ref|YP_979569.1| - 0.00071 19.4 0.0 0.014 15.2 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|121639345|ref|YP_979569.1| - 0.04 13.4 0.0 1.1 8.7 0.0 2.0 2 0 0 2 2 2 0 Putative acetyl-transferase Peptidase_M22 PF00814.25 gi|121639346|ref|YP_979570.1| - 1.7e-25 90.2 0.8 2.1e-25 89.9 0.8 1.1 1 0 0 1 1 1 1 Glycoprotease family Mycobact_memb PF05423.13 gi|121639346|ref|YP_979570.1| - 0.002 18.0 0.3 0.003 17.5 0.3 1.3 1 0 0 1 1 1 1 Mycobacterium membrane protein GATase PF00117.28 gi|121639346|ref|YP_979570.1| - 0.02 14.7 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I TsaE PF02367.17 gi|121639347|ref|YP_979571.1| - 4.1e-29 101.1 0.0 4.9e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RuvB_N PF05496.12 gi|121639347|ref|YP_979571.1| - 0.0028 17.4 0.1 0.0051 16.6 0.1 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 gi|121639347|ref|YP_979571.1| - 0.0042 17.0 0.0 0.0054 16.7 0.0 1.2 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 gi|121639347|ref|YP_979571.1| - 0.007 16.8 0.1 0.011 16.1 0.1 1.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|121639347|ref|YP_979571.1| - 0.017 15.7 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 gi|121639347|ref|YP_979571.1| - 0.029 14.1 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|121639347|ref|YP_979571.1| - 0.046 12.9 0.1 0.064 12.5 0.1 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain PhoH PF02562.16 gi|121639347|ref|YP_979571.1| - 0.055 12.9 0.0 0.079 12.4 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 gi|121639347|ref|YP_979571.1| - 0.055 13.0 1.0 0.063 12.9 0.6 1.6 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|121639347|ref|YP_979571.1| - 0.056 13.0 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|121639347|ref|YP_979571.1| - 0.057 13.6 0.1 0.14 12.3 0.0 1.7 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|121639347|ref|YP_979571.1| - 0.096 13.0 0.0 0.13 12.5 0.0 1.3 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121639347|ref|YP_979571.1| - 0.16 11.7 0.1 0.29 10.9 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|121639347|ref|YP_979571.1| - 0.16 12.5 0.0 0.31 11.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|121639347|ref|YP_979571.1| - 0.16 11.2 0.1 0.33 10.2 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin NB-ARC PF00931.22 gi|121639347|ref|YP_979571.1| - 0.18 10.9 0.1 0.26 10.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain Ala_racemase_N PF01168.20 gi|121639348|ref|YP_979572.1| - 6.4e-67 225.4 2.1 7.8e-67 225.1 2.1 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 gi|121639348|ref|YP_979572.1| - 1e-43 148.1 0.1 4.3e-43 146.0 0.0 1.9 2 0 0 2 2 2 1 Alanine racemase, C-terminal domain PPE PF00823.19 gi|121639350|ref|YP_979574.1| - 6.9e-50 169.2 0.5 7.8e-50 169.1 0.5 1.0 1 0 0 1 1 1 1 PPE family WXG100 PF06013.12 gi|121639350|ref|YP_979574.1| - 2.1e-05 24.7 0.8 2.1e-05 24.7 0.8 1.7 2 0 0 2 2 2 1 Proteins of 100 residues with WXG CI-B14_5a PF07347.12 gi|121639350|ref|YP_979574.1| - 0.05 13.5 0.0 2.1 8.3 0.0 2.2 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) Nnf1 PF03980.14 gi|121639350|ref|YP_979574.1| - 0.11 12.9 0.6 0.31 11.4 0.6 1.7 1 1 0 1 1 1 0 Nnf1 rve PF00665.26 gi|121639351|ref|YP_979575.1| - 6.1e-24 84.5 0.1 1.7e-23 83.1 0.0 1.8 2 0 0 2 2 2 1 Integrase core domain rve_3 PF13683.6 gi|121639351|ref|YP_979575.1| - 5.1e-14 51.8 0.2 1e-13 50.8 0.2 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 gi|121639351|ref|YP_979575.1| - 1.5e-05 25.2 0.0 2.1e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 DDE domain HTH_32 PF13565.6 gi|121639351|ref|YP_979575.1| - 0.0029 18.2 5.1 0.004 17.7 0.0 3.3 4 0 0 4 4 4 1 Homeodomain-like domain Transposase_mut PF00872.18 gi|121639352|ref|YP_979576.1| - 2e-107 359.4 0.0 2.2e-107 359.2 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121639352|ref|YP_979576.1| - 1.3e-08 35.2 0.0 2.4e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain FTR_C PF02741.15 gi|121639352|ref|YP_979576.1| - 0.013 15.5 0.1 2.3 8.2 0.0 2.4 2 0 0 2 2 2 0 FTR, proximal lobe Pyridoxal_deC PF00282.19 gi|121639353|ref|YP_979577.1| - 8.5e-71 238.6 0.0 1.1e-70 238.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|121639353|ref|YP_979577.1| - 0.017 14.1 0.0 0.03 13.3 0.0 1.5 1 1 0 1 1 1 0 Aminotransferase class-V Carb_kinase PF01256.17 gi|121639354|ref|YP_979578.1| - 2.5e-71 240.0 3.7 3.9e-71 239.4 3.7 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|121639354|ref|YP_979578.1| - 6.9e-36 123.7 4.1 1.4e-35 122.7 4.1 1.6 1 0 0 1 1 1 1 YjeF-related protein N-terminus Phos_pyr_kin PF08543.12 gi|121639354|ref|YP_979578.1| - 4e-05 23.1 0.0 0.00011 21.7 0.0 1.7 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase DUF4436 PF14494.6 gi|121639356|ref|YP_979580.1| - 4.8e-101 337.3 4.1 6.9e-101 336.8 4.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4436) TctB PF07331.11 gi|121639356|ref|YP_979580.1| - 0.017 15.4 6.2 0.017 15.4 6.2 2.3 3 0 0 3 3 3 0 Tripartite tricarboxylate transporter TctB family Trp_oprn_chp PF09534.10 gi|121639356|ref|YP_979580.1| - 0.27 11.0 10.3 1.7 8.4 0.9 2.5 2 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF4536 PF15055.6 gi|121639356|ref|YP_979580.1| - 7 7.0 6.0 0.87 9.9 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4536) SIS PF01380.22 gi|121639357|ref|YP_979581.1| - 1.2e-58 196.7 0.1 1.8e-35 121.6 0.0 2.6 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|121639357|ref|YP_979581.1| - 7.4e-21 74.8 0.3 1.6e-20 73.6 0.3 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|121639357|ref|YP_979581.1| - 5.6e-15 55.3 0.0 1.1e-14 54.4 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|121639357|ref|YP_979581.1| - 0.0023 18.0 0.0 0.0061 16.6 0.0 1.8 1 0 0 1 1 1 1 SIS domain GATase_4 PF13230.6 gi|121639357|ref|YP_979581.1| - 0.003 16.5 0.0 0.0078 15.1 0.1 1.6 2 0 0 2 2 2 1 Glutamine amidotransferases class-II DUF2510 PF10708.9 gi|121639358|ref|YP_979582.1| - 4.1e-09 36.0 14.2 1.1e-08 34.7 14.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF2510) Chlorophyllase2 PF12740.7 gi|121639359|ref|YP_979583.1| - 2.2e-06 26.8 0.0 3.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Chlorophyllase PF07224.11 gi|121639359|ref|YP_979583.1| - 0.00022 20.3 0.2 0.00033 19.8 0.2 1.2 1 0 0 1 1 1 1 Chlorophyllase DLH PF01738.18 gi|121639359|ref|YP_979583.1| - 0.00027 20.6 0.0 0.0051 16.4 0.0 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family PAF-AH_p_II PF03403.13 gi|121639359|ref|YP_979583.1| - 0.25 9.8 0.2 12 4.2 0.0 2.0 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II WXG100 PF06013.12 gi|121639360|ref|YP_979584.1| - 0.011 16.0 2.5 0.012 15.8 0.8 2.0 2 1 0 2 2 2 0 Proteins of 100 residues with WXG Osteopontin PF00865.18 gi|121639360|ref|YP_979584.1| - 2.4 7.6 9.6 3.8 6.9 9.6 1.2 1 0 0 1 1 1 0 Osteopontin T7SS_ESX_EspC PF10824.8 gi|121639361|ref|YP_979585.1| - 0.0039 17.6 2.4 0.0044 17.5 2.4 1.1 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm PGM_PMM_I PF02878.16 gi|121639362|ref|YP_979586.1| - 1.6e-41 141.3 0.0 4.4e-41 139.8 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|121639362|ref|YP_979586.1| - 1.1e-27 96.5 0.8 2.1e-27 95.6 0.8 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|121639362|ref|YP_979586.1| - 6.2e-18 65.3 0.4 1.7e-17 63.9 0.4 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|121639362|ref|YP_979586.1| - 2.6e-15 56.3 1.0 8.5e-15 54.7 1.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ribosomal_S9 PF00380.19 gi|121639363|ref|YP_979587.1| - 2.3e-43 147.6 0.0 2.7e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|121639364|ref|YP_979588.1| - 1.4e-53 180.4 0.0 1.7e-53 180.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 WXG100 PF06013.12 gi|121639365|ref|YP_979589.1| - 2.2e-10 40.6 2.0 2.4e-10 40.5 2.0 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG DUF5315 PF17242.2 gi|121639365|ref|YP_979589.1| - 0.022 14.6 0.6 0.036 13.9 0.6 1.4 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) WXG100 PF06013.12 gi|121639366|ref|YP_979590.1| - 1.3e-13 51.0 0.0 1.6e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG FtsK_SpoIIIE PF01580.18 gi|121639368|ref|YP_979592.1| - 6.6e-118 392.4 1.6 6.4e-76 254.9 0.0 5.4 4 2 1 5 5 5 4 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|121639368|ref|YP_979592.1| - 4.7e-10 39.9 0.0 0.012 15.8 0.0 3.7 3 0 0 3 3 3 2 AAA domain AAA_16 PF13191.6 gi|121639368|ref|YP_979592.1| - 1.3e-08 35.4 9.6 0.092 13.1 0.1 4.5 4 2 0 4 4 3 3 AAA ATPase domain NACHT PF05729.12 gi|121639368|ref|YP_979592.1| - 5.7e-08 32.9 0.4 0.4 10.6 0.0 4.0 3 1 0 3 3 3 3 NACHT domain AAA_19 PF13245.6 gi|121639368|ref|YP_979592.1| - 3e-06 27.6 0.2 0.42 10.9 0.0 3.7 3 1 0 3 3 3 2 AAA domain DUF87 PF01935.17 gi|121639368|ref|YP_979592.1| - 2e-05 24.8 0.2 0.47 10.5 0.0 3.2 3 0 0 3 3 3 2 Helicase HerA, central domain MMR_HSR1 PF01926.23 gi|121639368|ref|YP_979592.1| - 8.9e-05 22.5 0.0 0.14 12.3 0.0 3.6 3 0 0 3 3 3 1 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|121639368|ref|YP_979592.1| - 0.0001 22.8 0.0 4.9 7.7 0.1 3.3 3 0 0 3 3 3 1 ABC transporter RNA_helicase PF00910.22 gi|121639368|ref|YP_979592.1| - 0.00011 22.6 0.0 3.2 8.2 0.0 3.3 3 0 0 3 3 3 2 RNA helicase AAA_29 PF13555.6 gi|121639368|ref|YP_979592.1| - 0.00035 20.2 0.1 2.1 8.2 0.0 3.4 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121639368|ref|YP_979592.1| - 0.0014 19.1 0.0 1.4 9.4 0.0 3.0 3 0 0 3 3 3 1 AAA domain DUF853 PF05872.12 gi|121639368|ref|YP_979592.1| - 0.017 13.7 1.6 0.057 12.0 0.1 2.2 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|121639368|ref|YP_979592.1| - 0.022 13.7 0.0 9.8 5.0 0.0 3.0 3 0 0 3 3 3 0 AAA-like domain TrwB_AAD_bind PF10412.9 gi|121639368|ref|YP_979592.1| - 0.026 13.4 0.4 2.8 6.8 0.0 3.0 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain TniB PF05621.11 gi|121639368|ref|YP_979592.1| - 0.054 12.9 0.0 3.2 7.1 0.0 3.3 4 0 0 4 4 4 0 Bacterial TniB protein LRR_RI_capping PF18779.1 gi|121639368|ref|YP_979592.1| - 0.071 12.8 0.3 0.31 10.7 0.2 2.0 2 0 0 2 2 2 0 Capping Ribonuclease inhibitor Leucine Rich Repeat AAA_33 PF13671.6 gi|121639368|ref|YP_979592.1| - 0.085 13.0 1.1 21 5.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain AAA_24 PF13479.6 gi|121639368|ref|YP_979592.1| - 0.093 12.4 0.0 13 5.4 0.0 3.1 3 0 0 3 3 3 0 AAA domain Roc PF08477.13 gi|121639368|ref|YP_979592.1| - 0.1 12.8 0.0 10 6.4 0.0 3.0 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase AAA_14 PF13173.6 gi|121639368|ref|YP_979592.1| - 0.1 12.6 0.0 18 5.3 0.0 2.7 3 0 0 3 3 3 0 AAA domain AAA_28 PF13521.6 gi|121639368|ref|YP_979592.1| - 0.17 12.1 0.0 5.7 7.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|121639368|ref|YP_979592.1| - 0.27 10.9 0.3 32 4.1 0.0 2.9 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase YukD PF08817.10 gi|121639369|ref|YP_979593.1| - 2.2e-20 73.1 2.0 4.3e-20 72.2 1.0 2.1 2 0 0 2 2 2 1 WXG100 protein secretion system (Wss), protein YukD Peptidase_S8 PF00082.22 gi|121639370|ref|YP_979594.1| - 2.9e-32 112.1 5.3 5.5e-32 111.2 5.3 1.5 1 1 0 1 1 1 1 Subtilase family T7SS_ESX1_EccB PF05108.13 gi|121639371|ref|YP_979595.1| - 2.1e-154 514.7 7.9 2.4e-154 514.5 7.9 1.0 1 0 0 1 1 1 1 Type VII secretion system ESX-1, transport TM domain B DUF4232 PF14016.6 gi|121639371|ref|YP_979595.1| - 0.065 13.4 4.0 0.13 12.4 1.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF4232) Cutinase PF01083.22 gi|121639372|ref|YP_979596.1| - 5.9e-56 189.2 0.0 7e-56 189.0 0.0 1.1 1 0 0 1 1 1 1 Cutinase Cutinase PF01083.22 gi|121639373|ref|YP_979597.1| - 3.4e-54 183.5 0.0 4e-54 183.3 0.0 1.1 1 0 0 1 1 1 1 Cutinase PE-PPE PF08237.11 gi|121639373|ref|YP_979597.1| - 0.0042 16.7 0.0 0.0068 16.0 0.0 1.3 1 0 0 1 1 1 1 PE-PPE domain VirJ PF06057.11 gi|121639373|ref|YP_979597.1| - 0.062 13.2 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) PseudoU_synth_1 PF01416.20 gi|121639375|ref|YP_979599.1| - 7.5e-28 97.1 0.0 1.4e-23 83.4 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase Ribosomal_L17 PF01196.19 gi|121639376|ref|YP_979600.1| - 1.2e-35 122.3 0.1 1.2e-35 122.3 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L17 RNA_pol_A_CTD PF03118.15 gi|121639377|ref|YP_979601.1| - 1.9e-26 91.6 0.0 3.3e-26 90.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_bac PF01000.26 gi|121639377|ref|YP_979601.1| - 6.8e-26 90.9 0.0 1.5e-25 89.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|121639377|ref|YP_979601.1| - 7.2e-21 73.4 0.0 1.3e-20 72.6 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L_2 PF13656.6 gi|121639377|ref|YP_979601.1| - 0.037 13.8 0.0 1.6 8.6 0.0 2.4 2 0 0 2 2 2 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_S4 PF00163.19 gi|121639378|ref|YP_979602.1| - 2.9e-28 98.6 3.5 5.8e-28 97.6 3.2 1.6 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 gi|121639378|ref|YP_979602.1| - 2.4e-16 59.2 0.3 4.3e-16 58.3 0.3 1.5 1 0 0 1 1 1 1 S4 domain Ribosomal_S11 PF00411.19 gi|121639379|ref|YP_979603.1| - 4e-48 162.4 1.3 5.1e-48 162.0 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 ELFV_dehydrog PF00208.21 gi|121639379|ref|YP_979603.1| - 0.0059 16.4 0.1 0.16 11.6 0.0 2.0 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ribosomal_L18p PF00861.22 gi|121639379|ref|YP_979603.1| - 0.012 16.0 0.2 0.015 15.7 0.2 1.3 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S13 PF00416.22 gi|121639380|ref|YP_979604.1| - 3.7e-37 127.6 5.8 1.5e-35 122.4 5.8 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|121639380|ref|YP_979604.1| - 0.035 12.9 0.0 0.038 12.7 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_L36 PF00444.18 gi|121639381|ref|YP_979605.1| - 3.2e-18 65.7 6.4 3.4e-18 65.6 6.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L36 eIF-1a PF01176.19 gi|121639382|ref|YP_979606.1| - 1e-28 98.9 0.1 1.1e-28 98.8 0.1 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Bac_luciferase PF00296.20 gi|121639383|ref|YP_979607.1| - 2.3e-15 56.8 3.6 4.1e-12 46.2 0.1 2.6 2 1 0 2 2 2 2 Luciferase-like monooxygenase GDP_Man_Dehyd PF16363.5 gi|121639384|ref|YP_979608.1| - 2.1e-75 254.2 0.0 2.8e-75 253.8 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|121639384|ref|YP_979608.1| - 4.9e-62 209.5 0.1 6.2e-62 209.2 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121639384|ref|YP_979608.1| - 5.1e-19 68.4 0.0 6.4e-19 68.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|121639384|ref|YP_979608.1| - 1.9e-18 66.5 0.0 3e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|121639384|ref|YP_979608.1| - 9.8e-15 54.4 0.0 2e-13 50.1 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|121639384|ref|YP_979608.1| - 1.6e-12 47.2 0.0 3e-12 46.3 0.0 1.4 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|121639384|ref|YP_979608.1| - 1.1e-08 35.2 0.2 1.7e-08 34.6 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|121639384|ref|YP_979608.1| - 3.2e-05 23.5 0.9 0.083 12.3 0.2 2.4 2 1 0 2 2 2 2 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|121639384|ref|YP_979608.1| - 0.0021 18.3 0.2 0.0074 16.5 0.2 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain VbhA PF18495.1 gi|121639384|ref|YP_979608.1| - 0.016 15.1 2.2 0.023 14.5 0.4 2.3 2 0 0 2 2 2 0 Antitoxin VbhA KR PF08659.10 gi|121639384|ref|YP_979608.1| - 0.019 14.9 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 KR domain NmrA PF05368.13 gi|121639384|ref|YP_979608.1| - 0.028 14.0 0.3 0.06 12.9 0.2 1.6 2 0 0 2 2 2 0 NmrA-like family dTDP_sugar_isom PF00908.17 gi|121639385|ref|YP_979609.1| - 1.3e-61 207.2 0.0 1.5e-61 207.0 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase FdtA PF05523.11 gi|121639385|ref|YP_979609.1| - 0.011 15.4 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal DUF222 PF02720.17 gi|121639386|ref|YP_979610.1| - 1.7e-19 70.4 2.5 2.1e-19 70.2 2.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF222) DUF222 PF02720.17 gi|121639387|ref|YP_979611.1| - 3.4e-64 217.2 3.4 4.3e-64 216.9 3.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF222) HNH PF01844.23 gi|121639387|ref|YP_979611.1| - 0.042 14.0 0.1 0.042 14.0 0.1 2.2 3 0 0 3 3 3 0 HNH endonuclease Epimerase PF01370.21 gi|121639388|ref|YP_979612.1| - 2.6e-27 95.9 0.0 4.6e-27 95.0 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|121639388|ref|YP_979612.1| - 1.1e-16 61.2 0.0 9.8e-14 51.5 0.0 3.0 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|121639388|ref|YP_979612.1| - 4.9e-16 58.5 0.0 8.5e-16 57.8 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|121639388|ref|YP_979612.1| - 2.4e-15 56.5 1.0 3.2e-11 42.9 0.2 3.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|121639388|ref|YP_979612.1| - 2.6e-14 53.0 0.0 3.7e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|121639388|ref|YP_979612.1| - 1.6e-10 40.6 0.0 1.5e-08 34.1 0.0 2.2 2 0 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 gi|121639388|ref|YP_979612.1| - 2.1e-10 40.8 0.1 3.4e-10 40.1 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|121639388|ref|YP_979612.1| - 0.0086 16.0 1.1 0.11 12.3 0.1 2.3 1 1 1 2 2 2 1 KR domain NmrA PF05368.13 gi|121639388|ref|YP_979612.1| - 0.019 14.5 0.3 0.15 11.6 0.3 1.9 1 1 0 1 1 1 0 NmrA-like family DFP PF04127.15 gi|121639388|ref|YP_979612.1| - 0.029 14.2 0.3 0.049 13.4 0.3 1.3 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein adh_short PF00106.25 gi|121639388|ref|YP_979612.1| - 0.033 13.6 0.0 0.059 12.8 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase UPF0236 PF06782.11 gi|121639388|ref|YP_979612.1| - 0.27 9.8 0.1 0.55 8.8 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0236) HMGL-like PF00682.19 gi|121639389|ref|YP_979613.1| - 6.5e-39 134.1 0.9 7.3e-38 130.6 0.7 2.4 2 1 0 2 2 2 1 HMGL-like ComA PF02679.15 gi|121639389|ref|YP_979613.1| - 0.00051 19.6 0.0 0.27 10.7 0.0 2.9 2 1 1 3 3 3 2 (2R)-phospho-3-sulfolactate synthase (ComA) LETM1 PF07766.13 gi|121639389|ref|YP_979613.1| - 0.25 10.7 0.0 0.35 10.2 0.0 1.1 1 0 0 1 1 1 0 LETM1-like protein TPP_enzyme_N PF02776.18 gi|121639390|ref|YP_979614.1| - 1.8e-45 154.7 0.4 1.1e-44 152.0 0.2 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|121639390|ref|YP_979614.1| - 2.2e-30 105.5 0.2 2.2e-30 105.5 0.2 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|121639390|ref|YP_979614.1| - 4.8e-28 97.6 0.0 9.7e-28 96.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DUF4774 PF15999.5 gi|121639390|ref|YP_979614.1| - 0.067 13.0 0.2 0.067 13.0 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4774) POR_N PF01855.19 gi|121639390|ref|YP_979614.1| - 0.11 12.2 0.2 0.17 11.6 0.2 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Cupin_2 PF07883.11 gi|121639391|ref|YP_979615.1| - 5.5e-14 51.6 0.0 7.9e-14 51.1 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|121639391|ref|YP_979615.1| - 3.7e-05 23.3 0.1 6.6e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|121639391|ref|YP_979615.1| - 0.00012 21.7 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding_2 PF14525.6 gi|121639391|ref|YP_979615.1| - 0.00021 21.0 0.3 0.00043 20.0 0.3 1.5 1 0 0 1 1 1 1 AraC-binding-like domain AraC_binding PF02311.19 gi|121639391|ref|YP_979615.1| - 0.00057 19.8 0.0 0.00095 19.1 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|121639391|ref|YP_979615.1| - 0.025 14.5 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase SnoaL_4 PF13577.6 gi|121639392|ref|YP_979616.1| - 1.7e-25 89.6 1.0 1.7e-25 89.6 1.0 1.7 1 1 1 2 2 2 1 SnoaL-like domain DUF4440 PF14534.6 gi|121639392|ref|YP_979616.1| - 3.7e-06 27.3 1.6 2.2e-05 24.8 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 gi|121639392|ref|YP_979616.1| - 0.0002 22.0 2.0 0.00021 21.9 1.0 1.6 1 1 1 2 2 2 1 SnoaL-like domain Ring_hydroxyl_B PF00866.18 gi|121639392|ref|YP_979616.1| - 0.075 13.1 0.1 1.9 8.5 0.1 2.2 1 1 1 2 2 2 0 Ring hydroxylating beta subunit Abhydrolase_6 PF12697.7 gi|121639393|ref|YP_979617.1| - 1.1e-17 65.5 11.1 1.3e-17 65.2 11.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639393|ref|YP_979617.1| - 2e-16 60.4 0.2 9.4e-14 51.7 0.3 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639393|ref|YP_979617.1| - 3e-13 49.6 0.3 1.3e-12 47.5 0.3 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|121639393|ref|YP_979617.1| - 0.0038 17.3 0.0 0.012 15.7 0.0 1.7 2 0 0 2 2 2 1 TAP-like protein UPF0227 PF05728.12 gi|121639393|ref|YP_979617.1| - 0.12 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Sugar_tr PF00083.24 gi|121639394|ref|YP_979618.1| - 2.4e-38 132.2 20.4 6.7e-25 87.9 5.6 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|121639394|ref|YP_979618.1| - 1.6e-22 80.0 28.2 1.6e-22 80.0 28.2 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF3792 PF12670.7 gi|121639394|ref|YP_979618.1| - 0.0072 16.5 23.1 0.21 11.8 0.2 4.3 3 1 1 4 4 4 2 Protein of unknown function (DUF3792) AzlD PF05437.12 gi|121639394|ref|YP_979618.1| - 0.54 10.5 20.1 0.73 10.0 0.1 4.5 4 2 2 6 6 6 0 Branched-chain amino acid transport protein (AzlD) PE PF00934.20 gi|121639395|ref|YP_979619.1| - 4.2e-30 103.9 15.4 4.6e-30 103.8 15.4 1.0 1 0 0 1 1 1 1 PE family T7SS_ESX_EspC PF10824.8 gi|121639395|ref|YP_979619.1| - 0.22 12.0 9.2 0.27 11.7 9.2 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PPE PF00823.19 gi|121639396|ref|YP_979620.1| - 1.7e-56 190.7 24.8 1.7e-56 190.7 24.8 2.6 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121639396|ref|YP_979620.1| - 3.8e-15 56.6 13.1 3.8e-15 56.6 13.1 5.0 2 1 0 2 2 2 1 Polymorphic PE/PPE proteins C terminal Patatin PF01734.22 gi|121639397|ref|YP_979621.1| - 2.9e-17 63.5 2.3 2.9e-17 63.5 2.3 1.8 2 0 0 2 2 2 1 Patatin-like phospholipase DUF4128 PF13554.6 gi|121639397|ref|YP_979621.1| - 0.041 13.9 0.1 0.16 12.1 0.0 1.9 2 1 0 2 2 2 0 Bacteriophage related domain of unknown function DUF3376 PF11856.8 gi|121639398|ref|YP_979622.1| - 2.4e-08 33.5 4.2 9.9e-08 31.4 4.2 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3376) GFRP PF06399.13 gi|121639398|ref|YP_979622.1| - 0.057 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) WES_acyltransf PF03007.16 gi|121639399|ref|YP_979623.1| - 3.9e-104 348.1 0.0 1.1e-103 346.6 0.0 1.7 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639399|ref|YP_979623.1| - 2e-35 121.9 0.0 3.3e-35 121.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SfLAP PF11139.8 gi|121639400|ref|YP_979624.1| - 2.7e-60 203.5 25.3 3.1e-60 203.3 25.3 1.0 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein Saf_2TM PF18303.1 gi|121639400|ref|YP_979624.1| - 0.43 10.2 2.0 1.3 8.5 0.2 2.2 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain Cytochrom_B_C PF00032.17 gi|121639400|ref|YP_979624.1| - 0.72 10.2 4.1 7.9 6.8 0.1 2.8 2 1 2 4 4 4 0 Cytochrome b(C-terminal)/b6/petD Tetraspanin PF00335.20 gi|121639400|ref|YP_979624.1| - 8.8 6.0 9.2 0.67 9.6 2.6 2.3 1 1 1 2 2 2 0 Tetraspanin family DUF2510 PF10708.9 gi|121639401|ref|YP_979625.1| - 5.7e-12 45.2 12.1 2.1e-11 43.4 12.1 2.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2510) Lipoprotein_21 PF14041.6 gi|121639402|ref|YP_979626.1| - 1.3e-23 82.9 0.1 2.1e-23 82.2 0.1 1.3 1 0 0 1 1 1 1 LppP/LprE lipoprotein DUF4381 PF14316.6 gi|121639402|ref|YP_979626.1| - 0.03 14.5 2.1 0.05 13.8 2.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4381) LytR_cpsA_psr PF03816.14 gi|121639403|ref|YP_979627.1| - 5.6e-43 146.7 0.0 1.1e-42 145.8 0.0 1.5 1 0 0 1 1 1 1 Cell envelope-related transcriptional attenuator domain LytR_C PF13399.6 gi|121639403|ref|YP_979627.1| - 3.6e-11 43.9 0.3 3.6e-11 43.9 0.3 2.6 3 0 0 3 3 3 1 LytR cell envelope-related transcriptional attenuator Alpha_GJ PF03229.13 gi|121639403|ref|YP_979627.1| - 3.4 8.2 9.3 0.43 11.1 0.6 2.4 2 0 0 2 2 2 0 Alphavirus glycoprotein J adh_short_C2 PF13561.6 gi|121639404|ref|YP_979628.1| - 9.7e-59 198.8 0.6 1.2e-58 198.4 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121639404|ref|YP_979628.1| - 1.8e-44 151.6 0.2 2.2e-44 151.3 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121639404|ref|YP_979628.1| - 2.6e-18 66.6 0.5 3.9e-18 66.0 0.5 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121639404|ref|YP_979628.1| - 0.00024 20.7 0.2 0.00054 19.5 0.0 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|121639404|ref|YP_979628.1| - 0.00037 19.7 0.0 0.0005 19.3 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein F420_oxidored PF03807.17 gi|121639404|ref|YP_979628.1| - 0.0055 17.3 0.2 0.011 16.4 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|121639404|ref|YP_979628.1| - 0.049 13.5 0.5 0.075 12.9 0.5 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|121639404|ref|YP_979628.1| - 0.05 13.9 0.1 0.071 13.4 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|121639404|ref|YP_979628.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DoxX PF07681.12 gi|121639405|ref|YP_979629.1| - 2.6e-14 53.6 3.2 2.6e-14 53.6 3.2 1.5 2 0 0 2 2 2 1 DoxX DoxX_2 PF13564.6 gi|121639405|ref|YP_979629.1| - 3.3e-08 33.6 1.9 4.7e-08 33.1 1.9 1.4 1 1 0 1 1 1 1 DoxX-like family DoxD PF04173.13 gi|121639405|ref|YP_979629.1| - 2.4e-05 24.3 2.5 0.0061 16.5 1.4 2.6 1 1 1 2 2 2 2 TQO small subunit DoxD DUF2892 PF11127.8 gi|121639405|ref|YP_979629.1| - 3.9 7.6 8.7 2.3 8.3 1.9 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2892) Abhydrolase_3 PF07859.13 gi|121639406|ref|YP_979630.1| - 1.3e-42 146.1 0.4 1.6e-42 145.8 0.4 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 gi|121639406|ref|YP_979630.1| - 1.2e-09 37.5 0.0 1.6e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Abhydrolase_6 PF12697.7 gi|121639406|ref|YP_979630.1| - 9.6e-05 23.1 6.5 0.00013 22.6 6.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|121639406|ref|YP_979630.1| - 0.00019 21.0 0.0 0.00053 19.5 0.0 1.7 2 0 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|121639406|ref|YP_979630.1| - 0.00041 19.7 0.0 0.00067 19.0 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|121639406|ref|YP_979630.1| - 0.0081 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal UPF0227 PF05728.12 gi|121639406|ref|YP_979630.1| - 0.024 14.6 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Chlorophyllase2 PF12740.7 gi|121639406|ref|YP_979630.1| - 0.026 13.5 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme Thioesterase PF00975.20 gi|121639406|ref|YP_979630.1| - 0.06 13.5 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain DLH PF01738.18 gi|121639406|ref|YP_979630.1| - 0.084 12.4 0.0 4.5 6.8 0.0 2.1 1 1 1 2 2 2 0 Dienelactone hydrolase family BTRD1 PF17660.1 gi|121639406|ref|YP_979630.1| - 0.12 12.2 0.0 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 Bacterial tandem repeat domain 1 PadR PF03551.14 gi|121639407|ref|YP_979631.1| - 3.6e-22 78.1 0.1 4.9e-22 77.7 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|121639407|ref|YP_979631.1| - 1.9e-05 24.8 0.0 2.3e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain RTP PF02334.16 gi|121639407|ref|YP_979631.1| - 0.00087 19.9 0.0 0.0011 19.6 0.0 1.3 1 1 0 1 1 1 1 Replication terminator protein MarR PF01047.22 gi|121639407|ref|YP_979631.1| - 0.0055 16.6 0.0 0.016 15.1 0.0 1.8 2 0 0 2 2 2 1 MarR family Replic_Relax PF13814.6 gi|121639407|ref|YP_979631.1| - 0.0075 16.3 0.6 0.0086 16.2 0.6 1.2 1 0 0 1 1 1 1 Replication-relaxation HxlR PF01638.17 gi|121639407|ref|YP_979631.1| - 0.015 15.2 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|121639407|ref|YP_979631.1| - 0.041 14.4 0.1 0.084 13.4 0.1 1.7 1 1 0 1 1 1 0 Winged helix DNA-binding domain GntR PF00392.21 gi|121639407|ref|YP_979631.1| - 0.056 13.1 0.9 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family DUF505 PF04458.12 gi|121639407|ref|YP_979631.1| - 0.13 10.6 0.0 0.15 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Glyco_transf_20 PF00982.21 gi|121639409|ref|YP_979633.1| - 6.9e-162 539.4 0.0 7.8e-162 539.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Glycos_transf_1 PF00534.20 gi|121639409|ref|YP_979633.1| - 2.7e-05 23.7 0.0 0.22 11.1 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|121639409|ref|YP_979633.1| - 0.0032 17.9 0.0 0.0071 16.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|121639409|ref|YP_979633.1| - 0.38 11.2 0.1 0.38 11.2 0.1 2.3 3 0 0 3 3 3 0 Glycosyl transferases group 1 SnoaL_4 PF13577.6 gi|121639411|ref|YP_979635.1| - 0.011 15.9 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 0 SnoaL-like domain VirB8 PF04335.13 gi|121639411|ref|YP_979635.1| - 0.059 13.2 0.3 0.098 12.5 0.3 1.3 1 0 0 1 1 1 0 VirB8 protein T4BSS_DotI_IcmL PF11393.8 gi|121639411|ref|YP_979635.1| - 0.078 12.5 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Type-IV b secretion system, inner-membrane complex component TPR_21 PF09976.9 gi|121639411|ref|YP_979635.1| - 0.12 12.0 0.5 0.13 12.0 0.5 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat-like domain AvrPto PF11592.8 gi|121639412|ref|YP_979636.1| - 0.096 12.7 0.2 0.5 10.4 0.1 2.0 2 0 0 2 2 2 0 Central core of the bacterial effector protein AvrPto SepZ PF06066.11 gi|121639412|ref|YP_979636.1| - 0.25 11.6 2.6 0.82 9.9 0.4 2.3 2 0 0 2 2 2 0 SepZ MlaD PF02470.20 gi|121639413|ref|YP_979637.1| - 5.2e-18 65.1 0.1 2e-17 63.2 0.3 1.9 2 0 0 2 2 2 1 MlaD protein MlaD PF02470.20 gi|121639414|ref|YP_979638.1| - 5.3e-12 45.9 0.1 1e-11 44.9 0.1 1.5 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121639414|ref|YP_979638.1| - 0.0026 17.2 1.4 0.0051 16.3 1.3 1.5 1 1 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative DUF2645 PF10840.8 gi|121639414|ref|YP_979638.1| - 0.011 16.3 0.0 0.02 15.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2645) Baculo_PEP_C PF04513.12 gi|121639414|ref|YP_979638.1| - 0.04 13.9 1.8 0.17 11.9 0.3 2.1 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MlaD PF02470.20 gi|121639415|ref|YP_979639.1| - 1.6e-13 50.7 0.5 3.5e-13 49.7 0.5 1.6 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121639415|ref|YP_979639.1| - 2.2e-08 33.9 3.3 3.3e-08 33.3 3.3 1.2 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative Baculo_PEP_C PF04513.12 gi|121639415|ref|YP_979639.1| - 1.5e-05 25.1 4.4 0.1 12.6 4.9 2.2 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus T7SS_ESX_EspC PF10824.8 gi|121639415|ref|YP_979639.1| - 0.0005 20.5 3.1 0.25 11.8 0.7 2.3 2 0 0 2 2 2 2 Excreted virulence factor EspC, type VII ESX diderm Serine_rich PF08824.10 gi|121639415|ref|YP_979639.1| - 0.00057 19.9 0.3 0.00095 19.2 0.3 1.3 1 0 0 1 1 1 1 Serine rich protein interaction domain Apolipoprotein PF01442.18 gi|121639415|ref|YP_979639.1| - 0.0067 16.3 0.6 0.039 13.8 0.6 2.0 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 gi|121639415|ref|YP_979639.1| - 0.01 16.1 1.9 2.9 8.2 0.8 2.6 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) WXG100 PF06013.12 gi|121639415|ref|YP_979639.1| - 0.012 15.8 5.0 10 6.5 0.5 4.0 1 1 2 3 3 3 0 Proteins of 100 residues with WXG Mer2 PF09074.10 gi|121639415|ref|YP_979639.1| - 0.015 15.1 1.3 0.22 11.3 1.3 2.2 1 1 0 1 1 1 0 Mer2 DUF1664 PF07889.12 gi|121639415|ref|YP_979639.1| - 0.1 12.7 0.6 2 8.5 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HisKA_3 PF07730.13 gi|121639415|ref|YP_979639.1| - 0.1 13.2 0.4 8.1 7.0 0.1 2.6 2 1 0 2 2 2 0 Histidine kinase UPF0242 PF06785.11 gi|121639415|ref|YP_979639.1| - 0.14 12.2 0.1 0.2 11.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG17 PF04108.12 gi|121639415|ref|YP_979639.1| - 0.16 11.0 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 Autophagy protein Apg17 Vps5 PF09325.10 gi|121639415|ref|YP_979639.1| - 0.36 10.3 1.5 1 8.9 1.3 1.5 1 1 0 1 1 1 0 Vps5 C terminal like Flagellin_C PF00700.21 gi|121639415|ref|YP_979639.1| - 0.56 10.6 5.8 8.6 6.8 0.0 2.6 2 1 1 3 3 3 0 Bacterial flagellin C-terminal helical region RmuC PF02646.16 gi|121639415|ref|YP_979639.1| - 0.69 9.0 2.3 7.4 5.6 0.6 2.5 2 1 1 3 3 3 0 RmuC family Flg_hook PF02120.16 gi|121639415|ref|YP_979639.1| - 2.3 8.2 4.8 3.1 7.7 0.1 2.7 3 0 0 3 3 2 0 Flagellar hook-length control protein FliK MlaD PF02470.20 gi|121639416|ref|YP_979640.1| - 3.2e-16 59.4 0.3 5.1e-16 58.7 0.3 1.3 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121639416|ref|YP_979640.1| - 1.4e-06 27.9 1.0 0.0026 17.3 0.5 2.2 1 1 1 2 2 2 2 Cholesterol uptake porter CUP1 of Mce4, putative Baculo_PEP_C PF04513.12 gi|121639416|ref|YP_979640.1| - 0.0019 18.2 1.3 0.89 9.6 0.2 2.4 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4164 PF13747.6 gi|121639416|ref|YP_979640.1| - 0.0079 16.4 0.2 0.019 15.3 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4164) HAUS-augmin3 PF14932.6 gi|121639416|ref|YP_979640.1| - 0.018 14.6 0.1 0.036 13.7 0.1 1.4 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 RPN13_C PF16550.5 gi|121639416|ref|YP_979640.1| - 0.02 15.1 0.5 0.15 12.2 0.4 2.5 1 1 1 2 2 2 0 UCH-binding domain T7SS_ESX_EspC PF10824.8 gi|121639416|ref|YP_979640.1| - 0.14 12.7 2.5 6 7.4 2.7 2.3 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm MttA_Hcf106 PF02416.16 gi|121639416|ref|YP_979640.1| - 0.19 11.1 3.9 2.9 7.3 2.2 2.7 3 0 0 3 3 3 0 mttA/Hcf106 family BAR_3 PF16746.5 gi|121639416|ref|YP_979640.1| - 0.27 10.9 0.0 0.5 10.0 0.0 1.4 2 0 0 2 2 2 0 BAR domain of APPL family DUF948 PF06103.11 gi|121639416|ref|YP_979640.1| - 0.27 11.5 5.2 1.4 9.2 0.1 3.5 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 gi|121639416|ref|YP_979640.1| - 0.29 9.1 0.0 1.1 7.1 0.0 1.7 2 0 0 2 2 2 0 Prominin MlaD PF02470.20 gi|121639417|ref|YP_979641.1| - 6.2e-17 61.7 0.1 1.3e-16 60.7 0.1 1.5 1 0 0 1 1 1 1 MlaD protein Mce4_CUP1 PF11887.8 gi|121639417|ref|YP_979641.1| - 3.3e-06 26.7 3.4 5.7e-06 26.0 3.1 1.5 1 1 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative Baculo_PEP_C PF04513.12 gi|121639417|ref|YP_979641.1| - 0.034 14.2 3.0 0.066 13.3 2.8 1.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CcmE PF03100.15 gi|121639417|ref|YP_979641.1| - 0.046 13.7 0.3 0.084 12.9 0.3 1.3 1 0 0 1 1 1 0 CcmE CorA PF01544.18 gi|121639417|ref|YP_979641.1| - 0.057 12.7 0.1 0.098 12.0 0.1 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein MAP65_ASE1 PF03999.12 gi|121639417|ref|YP_979641.1| - 0.082 11.6 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Mod_r PF07200.13 gi|121639417|ref|YP_979641.1| - 0.17 12.0 0.1 0.24 11.5 0.1 1.2 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Mce4_CUP1 PF11887.8 gi|121639418|ref|YP_979642.1| - 8.4e-50 169.6 0.0 1.1e-49 169.3 0.0 1.1 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative MlaD PF02470.20 gi|121639418|ref|YP_979642.1| - 1e-14 54.6 0.2 2.6e-14 53.2 0.2 1.8 2 0 0 2 2 2 1 MlaD protein MlaE PF02405.16 gi|121639419|ref|YP_979643.1| - 2.1e-50 171.4 29.6 2.6e-50 171.1 29.6 1.1 1 0 0 1 1 1 1 Permease MlaE MlaE PF02405.16 gi|121639420|ref|YP_979644.1| - 1.5e-60 204.5 19.2 1.7e-60 204.3 19.2 1.0 1 0 0 1 1 1 1 Permease MlaE adh_short PF00106.25 gi|121639421|ref|YP_979645.1| - 2e-38 131.8 5.5 2.7e-38 131.4 5.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639421|ref|YP_979645.1| - 1.3e-33 116.5 9.7 1.8e-33 116.1 9.7 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121639421|ref|YP_979645.1| - 5.8e-15 55.7 6.8 1.5e-14 54.4 6.8 1.5 1 1 0 1 1 1 1 KR domain Omp_AT PF11557.8 gi|121639421|ref|YP_979645.1| - 0.022 13.8 0.0 0.031 13.2 0.0 1.1 1 0 0 1 1 1 0 Solitary outer membrane autotransporter beta-barrel domain Fer4_15 PF13459.6 gi|121639422|ref|YP_979646.1| - 1.2e-13 51.6 3.8 1.4e-13 51.4 3.8 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|121639422|ref|YP_979646.1| - 2.4e-13 50.4 1.6 3e-13 50.1 1.6 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_19 PF06902.11 gi|121639422|ref|YP_979646.1| - 1e-05 25.5 0.0 1.3e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Acyl-CoA_dh_1 PF00441.24 gi|121639423|ref|YP_979647.1| - 5.1e-41 140.4 0.1 7.7e-41 139.8 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639423|ref|YP_979647.1| - 5.7e-23 81.7 0.1 1.3e-22 80.6 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639423|ref|YP_979647.1| - 6.1e-20 71.2 0.0 1.1e-19 70.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121639423|ref|YP_979647.1| - 0.00011 22.5 0.0 0.0002 21.6 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|121639423|ref|YP_979647.1| - 0.17 12.4 0.0 0.4 11.2 0.0 1.6 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_1 PF00441.24 gi|121639424|ref|YP_979648.1| - 1.6e-22 80.3 0.3 2.6e-22 79.7 0.3 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639424|ref|YP_979648.1| - 5.7e-13 49.3 1.0 1.3e-12 48.1 1.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639424|ref|YP_979648.1| - 2.5e-12 47.4 0.0 5.8e-12 46.3 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639424|ref|YP_979648.1| - 0.0023 18.1 0.0 0.0043 17.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain AMP-binding PF00501.28 gi|121639425|ref|YP_979649.1| - 1.2e-58 198.7 0.0 1.5e-58 198.4 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121639425|ref|YP_979649.1| - 2.8e-07 31.4 0.0 7.3e-07 30.1 0.0 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PE PF00934.20 gi|121639426|ref|YP_979650.1| - 6.5e-31 106.5 23.5 1.2e-30 105.7 23.5 1.4 1 0 0 1 1 1 1 PE family PE PF00934.20 gi|121639427|ref|YP_979651.1| - 1.3e-33 115.2 13.9 2.2e-33 114.4 13.9 1.4 1 0 0 1 1 1 1 PE family TPP_enzyme_N PF02776.18 gi|121639428|ref|YP_979652.1| - 1.8e-35 122.1 3.2 6e-34 117.1 2.1 2.6 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|121639428|ref|YP_979652.1| - 6.1e-31 107.3 0.1 2.9e-29 101.8 0.0 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amidohydro_2 PF04909.14 gi|121639429|ref|YP_979653.1| - 5.5e-38 131.4 0.3 6.7e-38 131.1 0.3 1.1 1 0 0 1 1 1 1 Amidohydrolase TruB-C_2 PF09157.11 gi|121639429|ref|YP_979653.1| - 6.6e-06 26.1 0.0 0.2 11.7 0.0 2.7 3 0 0 3 3 3 2 Pseudouridine synthase II TruB, C-terminal PE PF00934.20 gi|121639430|ref|YP_979654.1| - 6.5e-34 116.1 14.9 1.2e-33 115.3 14.9 1.4 1 0 0 1 1 1 1 PE family AMP-binding_C PF13193.6 gi|121639431|ref|YP_979655.1| - 8.9e-17 61.9 0.1 2.4e-16 60.4 0.1 1.7 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|121639431|ref|YP_979655.1| - 0.00026 19.7 0.1 0.00041 19.1 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme PE PF00934.20 gi|121639432|ref|YP_979656.1| - 1.3e-32 112.0 14.4 2e-32 111.4 14.4 1.3 1 0 0 1 1 1 1 PE family AMP-binding PF00501.28 gi|121639433|ref|YP_979657.1| - 6.6e-66 222.6 0.0 9e-66 222.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121639433|ref|YP_979657.1| - 3.6e-16 59.9 0.1 1.2e-15 58.2 0.1 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ECH_1 PF00378.20 gi|121639434|ref|YP_979658.1| - 1.9e-56 191.2 0.0 2.2e-56 191.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121639434|ref|YP_979658.1| - 3.1e-32 112.4 0.0 1.4e-27 97.1 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase MTES_1575 PF18741.1 gi|121639435|ref|YP_979659.1| - 7.9e-05 22.8 0.0 0.00019 21.5 0.0 1.6 1 0 0 1 1 1 1 REase_MTES_1575 AbiEi_1 PF09407.10 gi|121639435|ref|YP_979659.1| - 0.007 16.7 2.1 0.042 14.2 2.1 2.1 1 1 0 1 1 1 1 AbiEi antitoxin C-terminal domain DUF559 PF04480.12 gi|121639435|ref|YP_979659.1| - 0.15 11.9 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF559) p450 PF00067.22 gi|121639436|ref|YP_979660.1| - 5.7e-24 84.7 0.7 3.3e-21 75.6 0.7 2.1 1 1 0 1 1 1 1 Cytochrome P450 malic PF00390.19 gi|121639437|ref|YP_979661.1| - 0.0036 17.1 0.0 0.0057 16.5 0.0 1.2 1 0 0 1 1 1 1 Malic enzyme, N-terminal domain ADC PF06314.11 gi|121639438|ref|YP_979662.1| - 4.5e-38 131.1 0.1 5.3e-38 130.9 0.1 1.0 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) Bac_luciferase PF00296.20 gi|121639439|ref|YP_979663.1| - 2.4e-71 240.8 5.5 2.9e-71 240.5 5.5 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase OB_aCoA_assoc PF01796.17 gi|121639440|ref|YP_979664.1| - 1e-25 89.5 1.9 3.1e-13 49.5 0.2 2.4 2 0 0 2 2 2 2 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|121639440|ref|YP_979664.1| - 0.00041 20.2 0.2 0.031 14.2 0.0 2.3 2 0 0 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) Thiolase_C PF02803.18 gi|121639441|ref|YP_979665.1| - 0.00044 19.9 0.0 0.00078 19.1 0.0 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Peptidase_M22 PF00814.25 gi|121639442|ref|YP_979666.1| - 0.00017 21.4 0.1 0.00025 20.9 0.1 1.2 1 0 0 1 1 1 1 Glycoprotease family Thiolase_N PF00108.23 gi|121639442|ref|YP_979666.1| - 0.00033 20.1 0.2 0.0018 17.7 0.1 1.9 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|121639442|ref|YP_979666.1| - 0.014 15.2 0.1 3.7 7.5 0.0 2.5 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NHL PF01436.21 gi|121639443|ref|YP_979667.1| - 2.5e-32 109.3 20.1 4.1e-06 26.5 0.1 6.3 6 0 0 6 6 6 6 NHL repeat SGL PF08450.12 gi|121639443|ref|YP_979667.1| - 9.2e-07 28.7 0.7 0.0098 15.5 0.1 3.6 2 2 0 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region US22 PF02393.16 gi|121639443|ref|YP_979667.1| - 0.0022 18.2 8.8 7.5 6.8 0.1 5.1 3 2 1 4 4 4 2 US22 like SBBP PF06739.11 gi|121639443|ref|YP_979667.1| - 0.0058 16.6 18.1 3.4 7.7 0.0 5.7 6 0 0 6 6 6 4 Beta-propeller repeat DUF4988 PF16378.5 gi|121639443|ref|YP_979667.1| - 0.014 15.1 0.0 0.77 9.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function SecE PF00584.20 gi|121639443|ref|YP_979667.1| - 0.017 15.0 0.0 0.062 13.2 0.0 1.9 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex Hexapep PF00132.24 gi|121639444|ref|YP_979668.1| - 5.4e-13 48.1 6.3 1.9e-06 27.3 0.7 4.1 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|121639444|ref|YP_979668.1| - 0.036 13.8 8.9 1.9 8.3 0.6 4.2 2 1 4 6 6 6 0 Hexapeptide repeat of succinyl-transferase Rieske PF00355.26 gi|121639445|ref|YP_979669.1| - 4.6e-17 61.7 0.1 8.5e-17 60.9 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Methyltransf_2 PF00891.18 gi|121639447|ref|YP_979671.1| - 0.009 15.3 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Sulfotransfer_3 PF13469.6 gi|121639448|ref|YP_979672.1| - 6.2e-65 219.6 0.6 9.2e-65 219.0 0.6 1.2 1 0 0 1 1 1 1 Sulfotransferase family Sulfotransfer_1 PF00685.27 gi|121639448|ref|YP_979672.1| - 6.5e-07 29.1 0.0 1.1e-06 28.4 0.0 1.4 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_4 PF17784.1 gi|121639448|ref|YP_979672.1| - 1.1e-05 25.3 2.1 0.00035 20.5 2.1 2.3 1 1 0 1 1 1 1 Sulfotransferase domain adh_short_C2 PF13561.6 gi|121639449|ref|YP_979673.1| - 4.7e-54 183.4 0.7 6.7e-54 182.9 0.7 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121639449|ref|YP_979673.1| - 1.8e-40 138.5 0.1 2.2e-40 138.2 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121639449|ref|YP_979673.1| - 2.6e-08 34.0 0.3 3.5e-08 33.6 0.3 1.2 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 gi|121639449|ref|YP_979673.1| - 0.0027 17.9 0.1 0.0052 17.0 0.1 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DUF1214 PF06742.11 gi|121639450|ref|YP_979674.1| - 0.00036 21.0 0.2 0.12 12.8 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1214) PPE PF00823.19 gi|121639451|ref|YP_979675.1| - 7.4e-64 214.6 24.3 7.4e-64 214.6 24.3 1.7 2 0 0 2 2 2 1 PPE family PE_PPE_C PF12484.8 gi|121639451|ref|YP_979675.1| - 6.9e-15 55.7 16.4 6.9e-15 55.7 16.4 4.8 3 1 0 4 4 4 1 Polymorphic PE/PPE proteins C terminal WXG100 PF06013.12 gi|121639451|ref|YP_979675.1| - 6.3 7.1 11.2 0.48 10.7 5.9 1.9 2 0 0 2 2 2 0 Proteins of 100 residues with WXG Pentapeptide_2 PF01469.18 gi|121639452|ref|YP_979676.1| - 1.3e-62 207.4 334.7 1.2e-09 37.9 18.8 11.7 6 4 7 13 13 13 13 Pentapeptide repeats (8 copies) PPE PF00823.19 gi|121639452|ref|YP_979676.1| - 2e-57 193.7 32.6 3.2e-57 193.0 32.6 1.3 1 0 0 1 1 1 1 PPE family HMGL-like PF00682.19 gi|121639453|ref|YP_979677.1| - 1.2e-49 169.2 3.3 1.5e-49 168.9 3.3 1.1 1 0 0 1 1 1 1 HMGL-like DmpG_comm PF07836.11 gi|121639453|ref|YP_979677.1| - 3.7e-28 96.8 0.1 9.6e-28 95.5 0.1 1.7 1 0 0 1 1 1 1 DmpG-like communication domain AcetDehyd-dimer PF09290.11 gi|121639454|ref|YP_979678.1| - 1.3e-63 213.3 0.6 1.9e-63 212.8 0.6 1.3 1 0 0 1 1 1 1 Prokaryotic acetaldehyde dehydrogenase, dimerisation Semialdhyde_dh PF01118.24 gi|121639454|ref|YP_979678.1| - 1.9e-10 41.2 0.0 1.1e-09 38.8 0.0 2.1 2 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|121639454|ref|YP_979678.1| - 0.00094 20.0 0.0 0.0017 19.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 gi|121639454|ref|YP_979678.1| - 0.0074 16.9 0.0 0.017 15.8 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain FAA_hydrolase PF01557.18 gi|121639455|ref|YP_979679.1| - 9.7e-12 45.0 0.1 1.3e-11 44.6 0.1 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FAD_binding_2 PF00890.24 gi|121639456|ref|YP_979680.1| - 1.2e-90 304.7 1.0 1.3e-90 304.5 1.0 1.0 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|121639456|ref|YP_979680.1| - 2.5e-11 43.6 1.0 4.4e-11 42.8 1.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|121639456|ref|YP_979680.1| - 7.8e-08 31.4 0.3 1.3e-07 30.7 0.3 1.3 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 gi|121639456|ref|YP_979680.1| - 3.4e-07 30.2 8.2 7.1e-06 25.8 4.8 2.5 2 1 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|121639456|ref|YP_979680.1| - 2.8e-06 27.5 1.5 8.6e-06 25.9 1.5 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|121639456|ref|YP_979680.1| - 8.8e-06 25.1 0.8 5.4e-05 22.5 0.5 2.3 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 gi|121639456|ref|YP_979680.1| - 1.7e-05 24.3 0.1 2.4e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|121639456|ref|YP_979680.1| - 2.9e-05 23.4 2.6 9.2e-05 21.8 0.5 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121639456|ref|YP_979680.1| - 0.0021 17.3 0.4 0.021 14.1 0.3 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121639456|ref|YP_979680.1| - 0.0057 15.8 5.5 0.014 14.5 4.5 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|121639456|ref|YP_979680.1| - 0.058 12.4 0.5 0.089 11.8 0.5 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|121639456|ref|YP_979680.1| - 0.087 13.4 1.1 0.19 12.3 0.8 1.7 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 gi|121639456|ref|YP_979680.1| - 0.24 9.9 0.0 0.37 9.3 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor AlaDh_PNT_C PF01262.21 gi|121639456|ref|YP_979680.1| - 1 8.6 3.0 1.9 7.7 3.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain MaoC_dehydratas PF01575.19 gi|121639457|ref|YP_979681.1| - 2.4e-26 91.7 0.0 3.5e-26 91.2 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|121639457|ref|YP_979681.1| - 3.4e-14 53.1 0.0 8.1e-12 45.4 0.0 2.3 2 1 0 2 2 2 2 N-terminal half of MaoC dehydratase PE-PPE PF08237.11 gi|121639458|ref|YP_979682.1| - 2.5e-65 220.2 2.2 4.6e-65 219.4 2.2 1.4 1 0 0 1 1 1 1 PE-PPE domain PPE PF00823.19 gi|121639458|ref|YP_979682.1| - 5.9e-57 192.2 31.5 1e-56 191.4 29.8 2.0 2 0 0 2 2 2 1 PPE family Thiolase_N PF00108.23 gi|121639459|ref|YP_979683.1| - 2.5e-06 27.1 1.6 6e-06 25.8 1.6 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Peptidase_M23_N PF18421.1 gi|121639459|ref|YP_979683.1| - 0.021 14.7 0.0 0.075 12.9 0.0 1.9 2 0 0 2 2 2 0 Peptidase family M23 N-terminal domain DUF4473 PF14747.6 gi|121639459|ref|YP_979683.1| - 0.027 15.0 0.0 0.05 14.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) MaoC_dehydratas PF01575.19 gi|121639460|ref|YP_979684.1| - 0.001 18.7 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain OB_aCoA_assoc PF01796.17 gi|121639461|ref|YP_979685.1| - 1.5e-20 73.0 2.9 3.1e-20 71.9 2.9 1.6 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated MaoC_dehydrat_N PF13452.6 gi|121639461|ref|YP_979685.1| - 1.5e-16 60.8 0.0 2.4e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase MaoC_dehydratas PF01575.19 gi|121639461|ref|YP_979685.1| - 0.011 15.3 0.0 0.021 14.4 0.0 1.4 1 0 0 1 1 1 0 MaoC like domain Acyl-CoA_dh_1 PF00441.24 gi|121639462|ref|YP_979686.1| - 2e-26 93.0 0.2 2.6e-26 92.6 0.2 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639462|ref|YP_979686.1| - 1.8e-22 80.1 0.0 4.1e-22 79.0 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639462|ref|YP_979686.1| - 2.2e-20 72.6 0.0 4.3e-20 71.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|121639463|ref|YP_979687.1| - 8.1e-15 55.3 0.0 1.6e-14 54.4 0.0 1.5 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639463|ref|YP_979687.1| - 5.7e-10 39.8 0.1 1.3e-09 38.7 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639463|ref|YP_979687.1| - 4.1e-05 23.9 0.0 0.00014 22.2 0.0 1.9 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain p450 PF00067.22 gi|121639464|ref|YP_979688.1| - 1.5e-18 66.8 0.8 3.9e-13 49.0 0.1 2.7 2 1 1 3 3 3 2 Cytochrome P450 Thiolase_N PF00108.23 gi|121639465|ref|YP_979689.1| - 7.1e-53 179.6 0.0 1.3e-52 178.7 0.0 1.4 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121639465|ref|YP_979689.1| - 1e-40 138.2 0.1 4.2e-39 133.0 0.1 2.4 2 0 0 2 2 2 1 Thiolase, C-terminal domain ACP_syn_III_C PF08541.10 gi|121639465|ref|YP_979689.1| - 0.033 14.3 0.1 0.16 12.2 0.0 2.2 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F420H2_quin_red PF04075.14 gi|121639466|ref|YP_979690.1| - 2.2e-58 196.0 0.1 2.5e-58 195.8 0.1 1.0 1 0 0 1 1 1 1 F420H(2)-dependent quinone reductase Putative_PNPOx PF01243.20 gi|121639466|ref|YP_979690.1| - 0.005 17.0 0.0 0.0088 16.2 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase adh_short PF00106.25 gi|121639467|ref|YP_979691.1| - 9.8e-42 142.6 8.5 2.2e-41 141.5 8.5 1.5 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639467|ref|YP_979691.1| - 1.7e-36 126.0 12.5 3.7e-36 124.8 12.5 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121639467|ref|YP_979691.1| - 2.8e-14 53.4 7.1 8.3e-14 51.9 7.1 1.7 1 1 0 1 1 1 1 KR domain AdoHcyase_NAD PF00670.21 gi|121639467|ref|YP_979691.1| - 0.57 10.2 6.4 1.7 8.7 1.7 2.4 1 1 1 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain adh_short_C2 PF13561.6 gi|121639468|ref|YP_979692.1| - 5.2e-53 180.0 1.0 8.5e-53 179.3 1.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121639468|ref|YP_979692.1| - 9.5e-44 149.2 1.0 2e-43 148.1 1.0 1.4 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121639468|ref|YP_979692.1| - 1.4e-06 28.3 0.4 4.7e-05 23.4 0.4 2.3 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|121639468|ref|YP_979692.1| - 5.5e-05 22.7 0.1 0.0001 21.9 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|121639468|ref|YP_979692.1| - 0.019 14.1 0.3 0.033 13.3 0.0 1.5 2 0 0 2 2 2 0 RmlD substrate binding domain THF_DHG_CYH_C PF02882.19 gi|121639468|ref|YP_979692.1| - 0.078 12.3 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ECH_1 PF00378.20 gi|121639469|ref|YP_979693.1| - 9.9e-37 126.6 0.3 1.1e-36 126.4 0.3 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121639469|ref|YP_979693.1| - 8.7e-20 71.5 0.1 1.1e-19 71.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase CoA_trans PF01144.23 gi|121639470|ref|YP_979694.1| - 2.3e-49 167.7 0.0 2.9e-49 167.4 0.0 1.1 1 0 0 1 1 1 1 Coenzyme A transferase NMO PF03060.15 gi|121639472|ref|YP_979696.1| - 1.8e-113 379.3 6.2 4.7e-113 377.9 6.2 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 gi|121639472|ref|YP_979696.1| - 7.9e-11 41.5 8.9 1.6e-10 40.6 8.8 1.5 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|121639472|ref|YP_979696.1| - 1.1e-06 27.9 8.0 1.1e-06 27.9 6.9 1.6 1 1 0 1 1 1 1 FMN-dependent dehydrogenase FA_desaturase PF00487.24 gi|121639473|ref|YP_979697.1| - 6.7e-36 124.4 23.9 1e-35 123.8 23.9 1.3 1 0 0 1 1 1 1 Fatty acid desaturase NAD_binding_1 PF00175.21 gi|121639473|ref|YP_979697.1| - 1.1e-15 58.2 0.0 2.1e-15 57.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2 PF00111.27 gi|121639473|ref|YP_979697.1| - 5.2e-13 48.7 0.0 8.6e-13 48.0 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 gi|121639473|ref|YP_979697.1| - 1.2e-12 48.1 0.0 2.2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|121639473|ref|YP_979697.1| - 0.2 11.8 0.0 0.61 10.2 0.0 1.7 2 0 0 2 2 2 0 Ferric reductase NAD binding domain MTES_1575 PF18741.1 gi|121639474|ref|YP_979698.1| - 2e-09 37.5 0.0 3.4e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 REase_MTES_1575 DUF559 PF04480.12 gi|121639474|ref|YP_979698.1| - 0.0001 22.1 0.0 0.00017 21.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF559) AbiEi_1 PF09407.10 gi|121639474|ref|YP_979698.1| - 0.009 16.3 2.4 0.019 15.3 2.4 1.5 1 0 0 1 1 1 1 AbiEi antitoxin C-terminal domain RAMA PF18755.1 gi|121639474|ref|YP_979698.1| - 0.094 13.1 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated Thiolase_N PF00108.23 gi|121639475|ref|YP_979699.1| - 3.7e-57 193.7 0.0 5.3e-57 193.1 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|121639475|ref|YP_979699.1| - 2.3e-41 140.3 0.3 8.6e-41 138.4 0.0 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|121639475|ref|YP_979699.1| - 3.8e-06 26.7 0.7 1.8e-05 24.5 0.2 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain TetR_C_24 PF17932.1 gi|121639476|ref|YP_979700.1| - 6.5e-20 71.5 0.1 1.1e-19 70.8 0.1 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121639476|ref|YP_979700.1| - 1.3e-17 63.3 0.4 2e-17 62.7 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_29 PF17938.1 gi|121639476|ref|YP_979700.1| - 1.8e-05 24.8 0.0 3e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|121639476|ref|YP_979700.1| - 7.3e-05 22.8 0.0 0.00014 21.9 0.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 gi|121639476|ref|YP_979700.1| - 0.0007 19.9 0.6 0.0068 16.7 0.0 2.4 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_4 PF08359.11 gi|121639476|ref|YP_979700.1| - 0.0054 16.9 0.0 0.0084 16.3 0.0 1.3 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region PPE PF00823.19 gi|121639477|ref|YP_979701.1| - 1.7e-55 187.4 27.8 2.5e-55 186.9 27.8 1.2 1 0 0 1 1 1 1 PPE family Pentapeptide_2 PF01469.18 gi|121639477|ref|YP_979701.1| - 3.3e-39 132.5 283.8 8.4e-09 35.2 29.7 11.6 6 4 4 11 11 11 10 Pentapeptide repeats (8 copies) WXG100 PF06013.12 gi|121639477|ref|YP_979701.1| - 2.3 8.5 6.1 5.1 7.4 6.1 1.5 1 0 0 1 1 1 0 Proteins of 100 residues with WXG adh_short_C2 PF13561.6 gi|121639478|ref|YP_979702.1| - 1.7e-59 201.2 5.1 2.1e-59 200.9 5.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|121639478|ref|YP_979702.1| - 5e-50 169.7 1.5 6e-50 169.4 1.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121639478|ref|YP_979702.1| - 3e-11 43.5 2.1 4.5e-11 43.0 2.1 1.3 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 gi|121639478|ref|YP_979702.1| - 0.026 13.9 0.1 0.049 13.0 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|121639478|ref|YP_979702.1| - 0.18 11.2 1.7 0.35 10.3 0.3 1.9 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 gi|121639478|ref|YP_979702.1| - 0.41 10.6 3.2 0.26 11.3 0.8 2.1 2 1 0 2 2 2 0 Zinc-binding dehydrogenase Acyl-CoA_dh_1 PF00441.24 gi|121639479|ref|YP_979703.1| - 1.3e-31 109.8 0.3 2.3e-31 109.0 0.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639479|ref|YP_979703.1| - 1.2e-24 86.4 0.0 2.4e-24 85.3 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|121639479|ref|YP_979703.1| - 3.6e-20 72.7 0.2 8.7e-20 71.5 0.2 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain AMP-binding PF00501.28 gi|121639480|ref|YP_979704.1| - 2.1e-91 306.6 0.1 2.5e-91 306.4 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121639480|ref|YP_979704.1| - 3.6e-19 69.5 0.2 9e-19 68.2 0.2 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.6 gi|121639480|ref|YP_979704.1| - 0.16 12.3 0.0 0.4 11.0 0.0 1.6 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639481|ref|YP_979705.1| - 4.4e-20 72.4 0.0 8.4e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121639481|ref|YP_979705.1| - 7.4e-19 68.4 0.0 1.2e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639481|ref|YP_979705.1| - 2.7e-18 66.0 0.0 1.1e-17 64.0 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Enolase_like_N PF18374.1 gi|121639481|ref|YP_979705.1| - 0.069 12.5 1.6 7.1 6.1 0.0 3.2 3 0 0 3 3 3 0 Enolase N-terminal domain-like Acyl-CoA_dh_1 PF00441.24 gi|121639482|ref|YP_979706.1| - 1.4e-22 80.5 5.1 2.2e-22 79.9 5.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639482|ref|YP_979706.1| - 4e-09 37.1 0.2 3.6e-08 34.0 0.0 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639482|ref|YP_979706.1| - 2.8e-05 24.4 8.2 0.00013 22.3 8.2 2.1 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|121639483|ref|YP_979707.1| - 1.2e-20 74.3 7.6 1.5e-20 73.9 4.7 2.5 3 1 0 3 3 3 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639483|ref|YP_979707.1| - 1.9e-14 54.3 0.5 4.9e-14 53.0 0.5 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|121639483|ref|YP_979707.1| - 3.6e-08 33.8 7.1 3.6e-08 33.8 7.1 2.3 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Aminotran_1_2 PF00155.21 gi|121639484|ref|YP_979708.1| - 2.5e-55 188.1 0.0 2.9e-55 187.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|121639484|ref|YP_979708.1| - 0.00031 19.6 0.0 0.00051 18.9 0.0 1.2 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Alliinase_C PF04864.13 gi|121639484|ref|YP_979708.1| - 0.04 12.8 0.0 0.058 12.3 0.0 1.2 1 0 0 1 1 1 0 Allinase Aminotran_5 PF00266.19 gi|121639484|ref|YP_979708.1| - 0.049 12.6 0.0 0.094 11.6 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V Aminotran_3 PF00202.21 gi|121639484|ref|YP_979708.1| - 0.049 12.3 0.0 0.07 11.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-III Bac_GDH PF05088.12 gi|121639484|ref|YP_979708.1| - 0.16 9.4 0.0 0.22 9.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Beta_elim_lyase PF01212.21 gi|121639484|ref|YP_979708.1| - 0.19 10.9 0.0 0.34 10.2 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase Acetyltransf_2 PF00797.17 gi|121639485|ref|YP_979709.1| - 1.4e-80 270.5 0.0 1.8e-80 270.2 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase Flavin_Reduct PF01613.18 gi|121639487|ref|YP_979711.1| - 1.8e-37 128.8 0.0 2.2e-37 128.5 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|121639487|ref|YP_979711.1| - 0.032 14.0 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) Glyoxalase PF00903.25 gi|121639488|ref|YP_979712.1| - 5.3e-22 78.4 0.0 1.1e-20 74.2 0.0 2.3 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|121639488|ref|YP_979712.1| - 3.2e-05 24.7 0.1 0.0012 19.7 0.0 2.6 2 0 0 2 2 2 1 Glyoxalase-like domain Abhydrolase_1 PF00561.20 gi|121639489|ref|YP_979713.1| - 7.2e-24 84.8 0.5 7.8e-22 78.2 0.5 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|121639489|ref|YP_979713.1| - 5.5e-21 76.2 3.3 6.3e-21 76.0 3.3 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|121639489|ref|YP_979713.1| - 6.2e-15 55.1 0.1 1.3e-14 54.1 0.1 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|121639489|ref|YP_979713.1| - 0.011 14.4 0.0 0.017 13.8 0.0 1.2 1 0 0 1 1 1 0 Ndr family Acyl-CoA_dh_2 PF08028.11 gi|121639490|ref|YP_979714.1| - 2.9e-41 140.9 6.9 2.9e-41 140.9 6.9 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639490|ref|YP_979714.1| - 6.2e-05 23.6 0.0 0.00027 21.6 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639490|ref|YP_979714.1| - 0.0013 18.8 0.0 0.0025 18.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|121639490|ref|YP_979714.1| - 0.022 15.0 3.1 0.039 14.2 2.5 1.7 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Fer2 PF00111.27 gi|121639491|ref|YP_979715.1| - 1.6e-14 53.6 0.5 4.8e-14 52.1 0.5 1.9 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 gi|121639491|ref|YP_979715.1| - 8e-13 49.0 0.0 2.2e-12 47.6 0.0 1.7 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|121639491|ref|YP_979715.1| - 2.1e-09 37.6 0.0 3.4e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|121639491|ref|YP_979715.1| - 0.0027 17.9 0.0 0.017 15.3 0.0 2.0 1 1 1 2 2 2 1 Ferric reductase NAD binding domain FAD_binding_9 PF08021.11 gi|121639491|ref|YP_979715.1| - 0.024 14.8 0.0 0.046 13.9 0.0 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain Acyl-CoA_dh_1 PF00441.24 gi|121639493|ref|YP_979717.1| - 1.9e-28 99.5 22.8 4.7e-18 65.8 6.8 3.3 3 2 0 3 3 3 2 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|121639493|ref|YP_979717.1| - 3.5e-22 79.2 4.4 1.7e-10 41.6 0.4 2.8 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639493|ref|YP_979717.1| - 1.3e-19 70.2 0.0 3.1e-19 69.0 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain TetR_C_20 PF17925.1 gi|121639494|ref|YP_979718.1| - 1e-38 131.9 1.5 2.1e-38 130.9 1.5 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 gi|121639494|ref|YP_979718.1| - 3.9e-16 58.6 0.1 8.7e-16 57.5 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 gi|121639494|ref|YP_979718.1| - 0.015 15.3 0.0 0.048 13.7 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Peripla_BP_3 PF13377.6 gi|121639495|ref|YP_979719.1| - 3.7e-17 63.2 0.5 1.1e-16 61.6 0.2 2.0 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 gi|121639495|ref|YP_979719.1| - 1.3e-09 37.9 0.0 5.6e-09 35.8 0.0 1.8 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 gi|121639495|ref|YP_979719.1| - 3.4e-07 29.9 0.0 1.1e-06 28.3 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_11 PF08279.12 gi|121639495|ref|YP_979719.1| - 0.032 14.2 0.0 0.072 13.0 0.0 1.6 1 0 0 1 1 1 0 HTH domain HTH_10 PF04967.12 gi|121639495|ref|YP_979719.1| - 0.046 13.5 0.1 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 HTH DNA binding domain GntR PF00392.21 gi|121639495|ref|YP_979719.1| - 0.047 13.3 0.1 0.18 11.5 0.1 2.0 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_35 PF13693.6 gi|121639495|ref|YP_979719.1| - 0.16 12.0 0.1 0.32 11.0 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|121639495|ref|YP_979719.1| - 0.18 11.7 3.3 0.69 9.8 0.3 3.1 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain PknH_C PF14032.6 gi|121639496|ref|YP_979720.1| - 2.4e-52 177.6 3.8 3e-52 177.3 3.8 1.1 1 0 0 1 1 1 1 PknH-like extracellular domain Lactamase_B_2 PF12706.7 gi|121639497|ref|YP_979721.1| - 0.00012 21.7 0.5 0.0011 18.5 0.5 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|121639497|ref|YP_979721.1| - 0.0065 16.5 0.1 0.011 15.7 0.1 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily ArsB PF02040.15 gi|121639498|ref|YP_979722.1| - 3.5e-23 82.6 24.4 4.6e-23 82.2 24.4 1.1 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 gi|121639498|ref|YP_979722.1| - 1e-16 61.0 39.0 1.8e-16 60.2 39.0 1.4 1 0 0 1 1 1 1 Citrate transporter SpoU_methylase PF00588.19 gi|121639499|ref|YP_979723.1| - 1.2e-34 119.6 0.1 2.5e-34 118.5 0.0 1.5 2 0 0 2 2 2 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 gi|121639499|ref|YP_979723.1| - 1.8e-15 57.0 0.0 3.4e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding TSNR_N PF04705.12 gi|121639499|ref|YP_979723.1| - 0.015 15.4 0.1 0.092 12.8 0.0 2.1 2 0 0 2 2 2 0 Thiostrepton-resistance methylase, N terminus tRNA-synt_1e PF01406.19 gi|121639500|ref|YP_979724.1| - 2.6e-126 421.0 0.0 3.2e-126 420.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|121639500|ref|YP_979724.1| - 6.1e-13 48.3 0.0 6.4e-06 25.2 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|121639500|ref|YP_979724.1| - 5.8e-07 29.9 0.0 1.5e-06 28.6 0.0 1.7 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.18 gi|121639500|ref|YP_979724.1| - 2.9e-06 26.5 0.0 0.0034 16.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|121639500|ref|YP_979724.1| - 6.8e-05 21.3 0.0 0.011 14.0 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) YgbB PF02542.16 gi|121639501|ref|YP_979725.1| - 2e-48 164.6 0.0 2.2e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 YgbB family IspD PF01128.19 gi|121639502|ref|YP_979726.1| - 2.5e-87 292.3 3.6 2.8e-87 292.1 3.6 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 gi|121639502|ref|YP_979726.1| - 1.1e-10 42.1 4.4 1.4e-10 41.7 4.4 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|121639502|ref|YP_979726.1| - 2e-05 24.6 0.0 2.5e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transferase PF00483.23 gi|121639502|ref|YP_979726.1| - 0.21 11.2 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase CarD_CdnL_TRCF PF02559.16 gi|121639503|ref|YP_979727.1| - 5.3e-20 71.9 0.1 7.1e-20 71.5 0.1 1.2 1 0 0 1 1 1 1 CarD-like/TRCF domain DUF4012 PF13196.6 gi|121639503|ref|YP_979727.1| - 0.06 13.8 0.0 0.091 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4012) PCuAC PF04314.13 gi|121639504|ref|YP_979728.1| - 0.11 12.3 0.1 6.1 6.7 0.0 2.5 2 1 0 2 2 2 0 Copper chaperone PCu(A)C PQQ_3 PF13570.6 gi|121639504|ref|YP_979728.1| - 0.12 12.9 0.1 0.58 10.7 0.4 2.1 2 1 0 2 2 2 0 PQQ-like domain LPAM_2 PF13627.6 gi|121639504|ref|YP_979728.1| - 2.1 8.3 5.6 4.7 7.2 5.6 1.6 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site AAA_25 PF13481.6 gi|121639505|ref|YP_979729.1| - 3.9e-17 62.5 2.7 1.2e-16 60.8 2.7 1.9 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|121639505|ref|YP_979729.1| - 1.7e-16 60.3 0.1 9.8e-14 51.2 0.1 2.1 1 1 0 1 1 1 1 KaiC Rubredoxin_2 PF18073.1 gi|121639505|ref|YP_979729.1| - 3.1e-10 39.6 4.8 5e-10 38.9 4.8 1.4 1 0 0 1 1 1 1 Rubredoxin metal binding domain DnaB_C PF03796.15 gi|121639505|ref|YP_979729.1| - 4.2e-09 36.1 0.0 6.4e-06 25.7 0.0 2.1 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain ChlI PF13541.6 gi|121639505|ref|YP_979729.1| - 3.6e-08 33.3 0.6 1.8e-07 31.0 0.1 2.3 2 1 2 4 4 3 1 Subunit ChlI of Mg-chelatase Lon_C PF05362.13 gi|121639505|ref|YP_979729.1| - 3.2e-06 26.8 3.9 7.8e-05 22.3 0.1 2.7 2 1 0 2 2 2 1 Lon protease (S16) C-terminal proteolytic domain AAA_16 PF13191.6 gi|121639505|ref|YP_979729.1| - 1.9e-05 25.1 0.4 6.5e-05 23.4 0.4 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|121639505|ref|YP_979729.1| - 2.2e-05 24.9 0.0 4.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|121639505|ref|YP_979729.1| - 4.3e-05 23.3 5.5 4.6e-05 23.2 2.5 2.4 2 1 0 2 2 2 1 AAA domain Rad51 PF08423.11 gi|121639505|ref|YP_979729.1| - 4.4e-05 22.9 0.4 0.00079 18.8 0.4 2.2 1 1 0 1 1 1 1 Rad51 AAA_22 PF13401.6 gi|121639505|ref|YP_979729.1| - 8.2e-05 22.9 0.0 0.00016 22.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|121639505|ref|YP_979729.1| - 0.0003 20.7 0.1 0.00064 19.7 0.1 1.5 1 1 0 1 1 1 1 NACHT domain AAA_5 PF07728.14 gi|121639505|ref|YP_979729.1| - 0.0019 18.2 0.1 0.0038 17.2 0.1 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|121639505|ref|YP_979729.1| - 0.0068 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|121639505|ref|YP_979729.1| - 0.0073 16.0 0.1 0.031 14.0 0.1 2.1 1 0 0 1 1 1 1 P-loop containing region of AAA domain RecA PF00154.21 gi|121639505|ref|YP_979729.1| - 0.012 15.1 0.8 0.021 14.3 0.8 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein MCM PF00493.23 gi|121639505|ref|YP_979729.1| - 0.029 13.5 0.0 0.07 12.2 0.0 1.6 1 0 0 1 1 1 0 MCM P-loop domain ABC_tran PF00005.27 gi|121639505|ref|YP_979729.1| - 0.039 14.5 0.0 0.096 13.2 0.0 1.7 1 0 0 1 1 1 0 ABC transporter DXP_reductoisom PF02670.16 gi|121639505|ref|YP_979729.1| - 0.041 14.6 1.0 0.094 13.4 1.0 1.6 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DUF2075 PF09848.9 gi|121639505|ref|YP_979729.1| - 0.07 12.4 0.0 0.094 11.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.15 gi|121639505|ref|YP_979729.1| - 0.074 13.0 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 NTPase RsgA_GTPase PF03193.16 gi|121639505|ref|YP_979729.1| - 0.077 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 gi|121639505|ref|YP_979729.1| - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|121639505|ref|YP_979729.1| - 0.15 11.8 0.1 0.46 10.2 0.1 1.8 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_10 PF12846.7 gi|121639505|ref|YP_979729.1| - 0.24 10.3 0.0 0.35 9.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain L_biotic_typeA PF04604.13 gi|121639505|ref|YP_979729.1| - 0.95 9.4 3.1 32 4.5 0.0 2.8 3 0 0 3 3 3 0 Type-A lantibiotic DisA-linker PF10635.9 gi|121639506|ref|YP_979730.1| - 4.5e-47 159.4 0.2 6.4e-47 158.9 0.2 1.2 1 0 0 1 1 1 1 DisA bacterial checkpoint controller linker region DisA_N PF02457.16 gi|121639506|ref|YP_979730.1| - 1e-24 86.4 0.0 1.9e-24 85.5 0.0 1.5 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding HHH_2 PF12826.7 gi|121639506|ref|YP_979730.1| - 3.5e-07 30.2 0.7 2.3e-06 27.6 0.0 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.23 gi|121639506|ref|YP_979730.1| - 0.011 15.6 0.0 1.9 8.5 0.0 2.5 2 0 0 2 2 2 0 Helix-hairpin-helix motif BicD PF09730.9 gi|121639506|ref|YP_979730.1| - 0.11 10.9 0.1 0.16 10.4 0.1 1.1 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D Spc24 PF08286.11 gi|121639506|ref|YP_979730.1| - 0.21 11.8 0.1 0.35 11.1 0.1 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Pro_CA PF00484.19 gi|121639508|ref|YP_979732.1| - 1.1e-38 133.0 0.2 1.4e-38 132.7 0.2 1.1 1 0 0 1 1 1 1 Carbonic anhydrase HhH-GPD PF00730.25 gi|121639509|ref|YP_979733.1| - 6.3e-16 58.8 0.0 1e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|121639509|ref|YP_979733.1| - 7.4e-08 31.9 0.0 3.8e-07 29.6 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|121639509|ref|YP_979733.1| - 0.0012 19.1 5.2 0.0025 18.1 5.2 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III PE PF00934.20 gi|121639510|ref|YP_979734.1| - 1.5e-35 121.3 22.0 2.4e-35 120.7 22.0 1.3 1 0 0 1 1 1 1 PE family DUF3526 PF12040.8 gi|121639510|ref|YP_979734.1| - 0.21 12.1 1.0 0.29 11.6 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3526) Abhydrolase_6 PF12697.7 gi|121639511|ref|YP_979735.1| - 6.9e-16 59.5 19.9 7.9e-16 59.3 19.9 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639511|ref|YP_979735.1| - 8.5e-12 45.3 0.2 9.2e-07 28.8 0.2 2.2 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639511|ref|YP_979735.1| - 4.9e-06 26.0 0.0 1.5e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 gi|121639511|ref|YP_979735.1| - 0.011 15.7 0.1 0.03 14.2 0.1 1.8 2 0 0 2 2 2 0 Serine hydrolase Esterase PF00756.20 gi|121639511|ref|YP_979735.1| - 0.093 12.4 0.2 0.2 11.2 0.2 1.7 1 1 0 1 1 1 0 Putative esterase ABM PF03992.16 gi|121639512|ref|YP_979736.1| - 2.6e-18 65.9 0.1 3.6e-18 65.5 0.1 1.3 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Beta-lactamase2 PF13354.6 gi|121639513|ref|YP_979737.1| - 1.6e-22 80.1 0.0 3.5e-22 79.0 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase enzyme family ORF_12_N PF18042.1 gi|121639513|ref|YP_979737.1| - 1.1e-18 67.5 0.3 2.7e-18 66.1 0.3 1.8 1 0 0 1 1 1 1 ORF 12 gene product N-terminal Peptidase_S11 PF00768.20 gi|121639513|ref|YP_979737.1| - 0.015 14.8 0.0 0.027 13.9 0.0 1.3 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase YdfA_immunity PF12127.8 gi|121639513|ref|YP_979737.1| - 0.13 11.3 0.1 0.21 10.6 0.1 1.2 1 0 0 1 1 1 0 SigmaW regulon antibacterial Amidase_2 PF01510.25 gi|121639514|ref|YP_979738.1| - 1.6e-13 51.2 0.1 2.1e-13 50.8 0.1 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase DUF3618 PF12277.8 gi|121639514|ref|YP_979738.1| - 0.13 12.5 0.3 0.32 11.3 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3618) PE PF00934.20 gi|121639515|ref|YP_979739.1| - 2.2e-36 124.1 19.4 2.2e-36 124.1 19.4 3.7 3 1 1 4 4 4 1 PE family AAA_2 PF07724.14 gi|121639516|ref|YP_979740.1| - 4.3e-52 176.7 0.0 2.9e-50 170.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 gi|121639516|ref|YP_979740.1| - 6.4e-35 119.2 2.0 1.5e-34 118.0 2.0 1.6 1 0 0 1 1 1 1 AAA lid domain Clp_N PF02861.20 gi|121639516|ref|YP_979740.1| - 1.4e-33 114.7 11.2 8.9e-18 64.2 0.6 3.0 3 0 0 3 3 2 2 Clp amino terminal domain, pathogenicity island component ClpB_D2-small PF10431.9 gi|121639516|ref|YP_979740.1| - 1e-24 86.4 0.4 3.9e-24 84.5 0.4 2.1 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 gi|121639516|ref|YP_979740.1| - 7.9e-22 78.1 0.0 6.6e-12 46.0 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|121639516|ref|YP_979740.1| - 6.1e-17 61.9 0.0 1.3e-10 41.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|121639516|ref|YP_979740.1| - 5.5e-13 49.7 2.1 1.9e-06 28.3 0.0 4.2 2 1 2 4 4 4 2 AAA ATPase domain Sigma54_activat PF00158.26 gi|121639516|ref|YP_979740.1| - 2.8e-10 40.2 0.1 2.6e-07 30.5 0.0 2.6 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 gi|121639516|ref|YP_979740.1| - 1.3e-08 35.2 0.1 0.0033 17.7 0.1 4.5 3 1 0 3 3 3 2 AAA domain UVR PF02151.19 gi|121639516|ref|YP_979740.1| - 1.2e-07 31.2 6.6 3.3e-07 29.8 6.6 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif TniB PF05621.11 gi|121639516|ref|YP_979740.1| - 1.2e-07 31.3 0.0 0.00011 21.6 0.0 3.8 2 2 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|121639516|ref|YP_979740.1| - 1.1e-06 28.7 1.8 0.039 13.9 0.1 4.0 3 2 1 4 4 3 2 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 gi|121639516|ref|YP_979740.1| - 1.2e-05 25.1 0.0 0.093 12.5 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 gi|121639516|ref|YP_979740.1| - 2.3e-05 25.0 0.5 0.19 12.3 0.0 3.3 3 0 0 3 3 3 2 AAA domain RsgA_GTPase PF03193.16 gi|121639516|ref|YP_979740.1| - 0.00011 22.2 0.0 0.32 10.9 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase RuvB_N PF05496.12 gi|121639516|ref|YP_979740.1| - 0.00011 22.0 0.2 2.1 8.1 0.0 4.4 4 0 0 4 4 4 1 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 gi|121639516|ref|YP_979740.1| - 0.00027 20.9 0.0 0.28 11.2 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|121639516|ref|YP_979740.1| - 0.00029 21.2 0.0 1 9.8 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|121639516|ref|YP_979740.1| - 0.00033 20.4 0.0 0.22 11.2 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_33 PF13671.6 gi|121639516|ref|YP_979740.1| - 0.0004 20.6 0.3 2.2 8.4 0.0 3.8 4 0 0 4 4 4 1 AAA domain AAA_3 PF07726.11 gi|121639516|ref|YP_979740.1| - 0.00083 19.2 0.1 0.57 10.0 0.0 3.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|121639516|ref|YP_979740.1| - 0.0014 18.9 0.4 5.5 7.2 0.0 3.6 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 gi|121639516|ref|YP_979740.1| - 0.0016 17.9 0.0 5.7 6.3 0.0 3.4 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI DNA_pol3_delta2 PF13177.6 gi|121639516|ref|YP_979740.1| - 0.0017 18.2 0.0 2.2 8.0 0.0 2.7 3 0 0 3 3 2 1 DNA polymerase III, delta subunit NACHT PF05729.12 gi|121639516|ref|YP_979740.1| - 0.0024 17.8 0.0 0.11 12.4 0.0 2.5 2 0 0 2 2 2 1 NACHT domain AAA_23 PF13476.6 gi|121639516|ref|YP_979740.1| - 0.003 18.1 2.6 0.36 11.3 0.0 3.2 2 2 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|121639516|ref|YP_979740.1| - 0.0075 16.0 0.0 2.4 8.0 0.0 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF815 PF05673.13 gi|121639516|ref|YP_979740.1| - 0.0087 15.2 0.4 2.2 7.4 0.0 3.4 4 0 0 4 4 3 1 Protein of unknown function (DUF815) Roc PF08477.13 gi|121639516|ref|YP_979740.1| - 0.0089 16.2 0.0 4.5 7.5 0.0 2.8 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ResIII PF04851.15 gi|121639516|ref|YP_979740.1| - 0.011 15.8 0.0 6.3 6.8 0.0 4.0 4 0 0 4 4 4 0 Type III restriction enzyme, res subunit AAA_7 PF12775.7 gi|121639516|ref|YP_979740.1| - 0.012 15.1 0.0 1.9 8.0 0.0 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 gi|121639516|ref|YP_979740.1| - 0.017 14.7 0.0 2.8 7.5 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|121639516|ref|YP_979740.1| - 0.024 14.4 0.0 2.6 7.7 0.0 3.4 3 0 0 3 3 3 0 AAA domain Torsin PF06309.11 gi|121639516|ref|YP_979740.1| - 0.026 14.6 0.0 0.45 10.6 0.0 2.7 3 0 0 3 3 3 0 Torsin Zeta_toxin PF06414.12 gi|121639516|ref|YP_979740.1| - 0.029 13.7 0.2 2.9 7.1 0.0 2.9 3 0 0 3 3 2 0 Zeta toxin CbiA PF01656.23 gi|121639516|ref|YP_979740.1| - 0.029 14.4 0.1 5.9 7.0 0.0 3.4 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 gi|121639516|ref|YP_979740.1| - 0.034 14.5 0.5 0.83 10.0 0.2 3.2 3 1 0 3 3 2 0 AAA domain NTPase_1 PF03266.15 gi|121639516|ref|YP_979740.1| - 0.052 13.4 0.1 8.7 6.2 0.0 3.0 3 0 0 3 3 2 0 NTPase DUF99 PF01949.16 gi|121639516|ref|YP_979740.1| - 0.061 12.7 0.0 8.6 5.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF99 TIP49 PF06068.13 gi|121639516|ref|YP_979740.1| - 0.073 12.3 0.0 15 4.7 0.0 2.6 2 0 0 2 2 2 0 TIP49 P-loop domain ABC_tran PF00005.27 gi|121639516|ref|YP_979740.1| - 0.084 13.4 0.0 6.9 7.2 0.0 2.7 2 0 0 2 2 2 0 ABC transporter PEPCK_ATP PF01293.20 gi|121639516|ref|YP_979740.1| - 0.17 10.5 0.0 0.31 9.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase Lsr2 PF11774.8 gi|121639517|ref|YP_979741.1| - 1e-43 147.9 0.3 1.1e-43 147.8 0.3 1.0 1 0 0 1 1 1 1 Lsr2 Pou PF00157.17 gi|121639517|ref|YP_979741.1| - 0.076 13.0 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Pou domain - N-terminal to homeobox domain tRNA-synt_2 PF00152.20 gi|121639518|ref|YP_979742.1| - 8.4e-69 232.0 0.0 1e-68 231.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|121639518|ref|YP_979742.1| - 1.3e-11 44.3 0.1 2.6e-11 43.4 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|121639518|ref|YP_979742.1| - 2.8e-05 23.7 0.2 0.0035 16.9 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Pan_kinase PF03309.14 gi|121639519|ref|YP_979743.1| - 2.4e-55 187.6 0.1 2.9e-55 187.3 0.1 1.1 1 0 0 1 1 1 1 Type III pantothenate kinase Asp_decarbox PF02261.16 gi|121639520|ref|YP_979744.1| - 1.1e-50 170.3 0.1 1.3e-50 170.2 0.1 1.0 1 0 0 1 1 1 1 Aspartate decarboxylase CDC48_N PF02359.18 gi|121639520|ref|YP_979744.1| - 0.099 12.8 0.1 0.17 12.1 0.1 1.4 1 1 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Pantoate_ligase PF02569.15 gi|121639521|ref|YP_979745.1| - 1.8e-91 306.0 0.0 2.1e-91 305.9 0.0 1.0 1 0 0 1 1 1 1 Pantoate-beta-alanine ligase Se-cys_synth_N PF12390.8 gi|121639521|ref|YP_979745.1| - 2.2 8.6 6.5 56 4.1 5.4 3.1 2 0 0 2 2 2 0 Selenocysteine synthase N terminal Rossmann-like PF10727.9 gi|121639522|ref|YP_979746.1| - 3.3e-57 191.8 5.9 3.3e-57 191.8 5.9 2.7 3 1 0 3 3 3 1 Rossmann-like domain DUF2520 PF10728.9 gi|121639522|ref|YP_979746.1| - 7.1e-38 129.2 1.1 1.2e-37 128.5 1.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF2520) F420_oxidored PF03807.17 gi|121639522|ref|YP_979746.1| - 2e-05 25.1 1.6 7.2e-05 23.3 0.1 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Trp_oprn_chp PF09534.10 gi|121639523|ref|YP_979747.1| - 0.021 14.6 4.1 0.041 13.7 4.1 1.5 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3180 PF11377.8 gi|121639524|ref|YP_979748.1| - 2.8e-39 134.4 22.2 3.1e-39 134.2 22.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3180) DUF4131 PF13567.6 gi|121639524|ref|YP_979748.1| - 0.017 14.8 7.7 0.73 9.5 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) NiFe-hyd_HybE PF11939.8 gi|121639524|ref|YP_979748.1| - 0.018 15.0 1.4 0.025 14.5 1.2 1.4 1 1 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE PrgI PF12666.7 gi|121639524|ref|YP_979748.1| - 0.71 10.6 3.6 5 7.9 0.7 2.2 2 0 0 2 2 2 0 PrgI family protein HPPK PF01288.20 gi|121639525|ref|YP_979749.1| - 6.3e-29 100.7 0.0 7.9e-29 100.4 0.0 1.1 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FolB PF02152.18 gi|121639526|ref|YP_979750.1| - 5.3e-35 120.3 0.2 5.9e-35 120.2 0.2 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase Pterin_bind PF00809.22 gi|121639527|ref|YP_979751.1| - 1.3e-85 286.9 0.1 1.5e-85 286.7 0.1 1.0 1 0 0 1 1 1 1 Pterin binding enzyme GTP_cyclohydroI PF01227.22 gi|121639528|ref|YP_979752.1| - 2.8e-76 255.0 0.0 3.2e-76 254.8 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I DUF2785 PF10978.8 gi|121639528|ref|YP_979752.1| - 0.057 13.2 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) AAA_22 PF13401.6 gi|121639528|ref|YP_979752.1| - 0.095 13.0 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Peptidase_M41 PF01434.18 gi|121639529|ref|YP_979753.1| - 4.7e-71 238.6 0.3 7.1e-71 238.0 0.3 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 gi|121639529|ref|YP_979753.1| - 2.4e-46 157.4 0.0 1.5e-45 154.9 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|121639529|ref|YP_979753.1| - 1.5e-10 40.7 0.2 3.3e-10 39.6 0.2 1.6 1 0 0 1 1 1 1 AAA+ lid domain FtsH_ext PF06480.15 gi|121639529|ref|YP_979753.1| - 3.2e-06 27.5 1.5 0.00011 22.5 1.1 2.5 2 0 0 2 2 2 1 FtsH Extracellular AAA_5 PF07728.14 gi|121639529|ref|YP_979753.1| - 1.4e-05 25.1 0.0 5.1e-05 23.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|121639529|ref|YP_979753.1| - 4.9e-05 23.8 0.4 0.0015 18.9 0.1 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|121639529|ref|YP_979753.1| - 0.0002 21.1 0.0 0.00056 19.7 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|121639529|ref|YP_979753.1| - 0.00028 20.2 0.1 0.00053 19.3 0.1 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|121639529|ref|YP_979753.1| - 0.0022 18.3 0.1 0.054 13.8 0.1 2.4 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|121639529|ref|YP_979753.1| - 0.0067 16.6 0.0 0.021 15.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|121639529|ref|YP_979753.1| - 0.026 14.3 0.0 0.049 13.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|121639529|ref|YP_979753.1| - 0.027 13.9 0.1 0.049 13.0 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|121639529|ref|YP_979753.1| - 0.034 14.1 0.0 0.069 13.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|121639529|ref|YP_979753.1| - 0.062 13.0 0.0 0.14 11.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|121639529|ref|YP_979753.1| - 0.077 13.2 0.3 0.2 11.9 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 gi|121639529|ref|YP_979753.1| - 0.092 12.3 0.2 0.49 10.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 gi|121639529|ref|YP_979753.1| - 0.12 12.8 0.4 0.45 10.9 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_2 PF07724.14 gi|121639529|ref|YP_979753.1| - 0.12 12.5 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Sigma54_activat PF00158.26 gi|121639529|ref|YP_979753.1| - 0.14 11.8 0.0 0.46 10.2 0.0 1.8 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_18 PF13238.6 gi|121639529|ref|YP_979753.1| - 0.15 12.6 0.0 0.36 11.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain CttA_N PF18244.1 gi|121639529|ref|YP_979753.1| - 0.19 12.1 0.1 0.4 11.1 0.1 1.5 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain RNA_helicase PF00910.22 gi|121639529|ref|YP_979753.1| - 0.21 12.0 0.0 0.97 9.9 0.0 2.1 2 0 0 2 2 2 0 RNA helicase Kelch_3 PF13415.6 gi|121639530|ref|YP_979754.1| - 3.7e-05 23.9 16.9 9.7 6.6 0.2 5.4 5 0 0 5 5 5 5 Galactose oxidase, central domain T7SS_ESX_EspC PF10824.8 gi|121639534|ref|YP_979758.1| - 1.3e-30 105.8 0.9 1.5e-30 105.6 0.9 1.0 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm EspB_PE PF18625.1 gi|121639534|ref|YP_979758.1| - 0.004 17.6 0.1 0.0066 16.9 0.1 1.5 1 0 0 1 1 1 1 ESX-1 secreted protein B PE domain DUF948 PF06103.11 gi|121639535|ref|YP_979759.1| - 0.014 15.6 1.8 4.1 7.7 0.8 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) SIMPL PF04402.14 gi|121639536|ref|YP_979760.1| - 4.8e-33 115.3 0.3 5.3e-33 115.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) Pribosyltran PF00156.27 gi|121639537|ref|YP_979761.1| - 2.1e-18 66.3 0.0 2.8e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|121639537|ref|YP_979761.1| - 0.009 15.5 0.0 0.01 15.3 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase ATP_bind_3 PF01171.20 gi|121639538|ref|YP_979762.1| - 9.9e-29 100.4 0.0 1.3e-28 100.0 0.0 1.2 1 0 0 1 1 1 1 PP-loop family TilS PF09179.11 gi|121639538|ref|YP_979762.1| - 4.5e-10 39.9 0.5 4.5e-10 39.9 0.5 2.4 3 0 0 3 3 3 1 TilS substrate binding domain Zincin_2 PF10103.9 gi|121639539|ref|YP_979763.1| - 2.4e-100 336.1 0.1 3e-100 335.7 0.1 1.1 1 0 0 1 1 1 1 Zincin-like metallopeptidase Peptidase_S13 PF02113.15 gi|121639540|ref|YP_979764.1| - 4.5e-131 437.6 7.5 4.7e-78 262.9 2.2 2.0 1 1 1 2 2 2 2 D-Ala-D-Ala carboxypeptidase 3 (S13) family Pyrophosphatase PF00719.19 gi|121639541|ref|YP_979765.1| - 7e-55 185.2 0.0 7.8e-55 185.0 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 gi|121639541|ref|YP_979765.1| - 0.024 14.3 0.0 0.055 13.2 0.0 1.7 1 1 0 1 1 1 0 Inorganic Pyrophosphatase DUF475 PF04332.15 gi|121639542|ref|YP_979766.1| - 9.8e-143 475.3 7.2 1.2e-142 475.0 7.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF475) TerC PF03741.16 gi|121639542|ref|YP_979766.1| - 7.3e-18 64.9 9.7 9.5e-16 58.0 9.7 2.5 1 1 0 1 1 1 1 Integral membrane protein TerC family UPF0182 PF03699.13 gi|121639542|ref|YP_979766.1| - 1.9 6.5 5.5 4.5 5.3 0.4 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0182) Glycos_transf_2 PF00535.26 gi|121639544|ref|YP_979768.1| - 3.9e-25 88.6 0.0 5.6e-25 88.1 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121639544|ref|YP_979768.1| - 0.00013 21.9 0.8 0.0071 16.2 0.1 2.2 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|121639544|ref|YP_979768.1| - 0.00013 22.4 0.0 0.0002 21.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF2304 PF10066.9 gi|121639545|ref|YP_979769.1| - 1.6e-26 92.6 2.4 1.8e-26 92.4 2.4 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Sugar_transport PF06800.12 gi|121639545|ref|YP_979769.1| - 0.024 14.0 0.1 0.038 13.3 0.1 1.3 1 0 0 1 1 1 0 Sugar transport protein DUF2269 PF10027.9 gi|121639545|ref|YP_979769.1| - 0.038 14.0 4.0 1.2 9.2 0.1 2.9 2 1 1 3 3 3 0 Predicted integral membrane protein (DUF2269) ATG22 PF11700.8 gi|121639545|ref|YP_979769.1| - 0.14 10.7 2.1 0.16 10.5 2.1 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like DUF2157 PF09925.9 gi|121639545|ref|YP_979769.1| - 0.19 11.5 6.4 1.9 8.3 0.2 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2157) ABC_export PF16962.5 gi|121639545|ref|YP_979769.1| - 0.21 10.0 3.8 0.072 11.5 0.9 1.6 1 1 0 1 1 1 0 Putative ABC exporter DUF4131 PF13567.6 gi|121639545|ref|YP_979769.1| - 0.36 10.5 5.9 0.19 11.4 4.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) PLDc_N PF13396.6 gi|121639545|ref|YP_979769.1| - 0.57 10.1 5.9 0.35 10.8 2.0 2.4 1 1 2 3 3 3 0 Phospholipase_D-nuclease N-terminal DUF308 PF03729.13 gi|121639545|ref|YP_979769.1| - 1.1 9.7 8.4 0.49 10.7 4.2 2.3 2 1 1 3 3 3 0 Short repeat of unknown function (DUF308) GWT1 PF06423.12 gi|121639545|ref|YP_979769.1| - 2.3 8.3 6.1 24 5.0 6.1 2.0 1 1 0 1 1 1 0 GWT1 PhyH PF05721.13 gi|121639546|ref|YP_979770.1| - 8e-38 130.8 0.0 1e-37 130.5 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) 2OG-FeII_Oxy_5 PF13759.6 gi|121639546|ref|YP_979770.1| - 0.045 14.2 0.0 0.072 13.5 0.0 1.3 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase Cupin_2 PF07883.11 gi|121639546|ref|YP_979770.1| - 0.083 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Cupin domain GDP_Man_Dehyd PF16363.5 gi|121639547|ref|YP_979771.1| - 2.6e-59 201.3 0.0 3.1e-58 197.7 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|121639547|ref|YP_979771.1| - 1.2e-57 195.2 0.0 1.4e-57 194.9 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121639547|ref|YP_979771.1| - 2.5e-17 62.8 0.0 4.2e-17 62.1 0.0 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|121639547|ref|YP_979771.1| - 1.8e-16 60.1 0.1 3.6e-16 59.1 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|121639547|ref|YP_979771.1| - 8.8e-11 41.5 0.1 1.4e-10 40.8 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|121639547|ref|YP_979771.1| - 1.9e-09 37.1 0.1 8e-05 21.9 0.0 2.5 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|121639547|ref|YP_979771.1| - 2.5e-09 37.3 0.1 3.6e-09 36.8 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|121639547|ref|YP_979771.1| - 0.00018 21.0 0.9 0.00079 18.9 0.9 2.2 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|121639547|ref|YP_979771.1| - 0.0013 18.7 0.1 0.0027 17.6 0.1 1.5 1 0 0 1 1 1 1 KR domain NmrA PF05368.13 gi|121639547|ref|YP_979771.1| - 0.033 13.8 1.2 0.058 13.0 1.2 1.4 1 1 0 1 1 1 0 NmrA-like family HTH_AsnC-type PF13404.6 gi|121639549|ref|YP_979773.1| - 3.5e-06 26.7 1.8 0.0041 16.9 0.3 2.5 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|121639549|ref|YP_979773.1| - 1.5e-05 24.6 0.0 4.6e-05 23.0 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|121639549|ref|YP_979773.1| - 2.4e-05 23.8 0.8 0.013 15.1 0.4 2.4 2 1 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_7 PF02796.15 gi|121639549|ref|YP_979773.1| - 3.8e-05 23.7 0.1 0.00015 21.8 0.0 2.0 2 1 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|121639549|ref|YP_979773.1| - 0.00019 21.1 0.7 0.00057 19.6 0.1 2.0 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|121639549|ref|YP_979773.1| - 0.00055 19.4 0.2 0.0012 18.3 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|121639549|ref|YP_979773.1| - 0.0013 18.5 1.6 0.0017 18.1 0.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|121639549|ref|YP_979773.1| - 0.0035 17.2 0.6 0.068 13.1 0.5 2.1 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 gi|121639549|ref|YP_979773.1| - 0.0062 16.4 0.4 0.038 13.9 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_17 PF12728.7 gi|121639549|ref|YP_979773.1| - 0.011 15.9 0.3 0.057 13.6 0.0 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|121639549|ref|YP_979773.1| - 0.013 15.5 0.0 0.86 9.7 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_32 PF13565.6 gi|121639549|ref|YP_979773.1| - 0.014 16.0 5.4 0.55 10.9 0.3 2.2 1 1 1 2 2 2 0 Homeodomain-like domain HTH_IclR PF09339.10 gi|121639549|ref|YP_979773.1| - 0.019 14.8 0.1 0.83 9.5 0.1 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain GntR PF00392.21 gi|121639549|ref|YP_979773.1| - 0.025 14.2 0.9 0.05 13.3 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family GerE PF00196.19 gi|121639549|ref|YP_979773.1| - 0.037 13.6 0.1 0.06 12.9 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_9 PF08221.11 gi|121639549|ref|YP_979773.1| - 0.04 14.0 0.1 0.072 13.2 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_28 PF13518.6 gi|121639549|ref|YP_979773.1| - 0.043 13.9 2.1 0.069 13.3 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain TnsD PF15978.5 gi|121639549|ref|YP_979773.1| - 0.067 12.2 0.0 0.075 12.0 0.0 1.0 1 0 0 1 1 1 0 Tn7-like transposition protein D MarR PF01047.22 gi|121639549|ref|YP_979773.1| - 0.082 12.9 0.0 0.22 11.5 0.0 1.7 2 0 0 2 2 2 0 MarR family NUMOD1 PF07453.13 gi|121639549|ref|YP_979773.1| - 0.086 13.1 0.1 0.24 11.7 0.1 1.7 2 0 0 2 2 2 0 NUMOD1 domain IstB_IS21 PF01695.17 gi|121639551|ref|YP_979775.1| - 1e-44 152.4 0.0 2.1e-38 131.8 0.0 2.1 1 1 1 2 2 2 2 IstB-like ATP binding protein ParB_C PF18064.1 gi|121639551|ref|YP_979775.1| - 0.043 14.0 0.3 0.043 14.0 0.3 2.5 2 1 1 3 3 3 0 Centromere-binding protein ParB C-terminal Bac_DnaA PF00308.18 gi|121639551|ref|YP_979775.1| - 0.16 11.8 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial dnaA protein Transposase_mut PF00872.18 gi|121639553|ref|YP_979777.1| - 4.1e-160 532.8 0.0 4.6e-160 532.6 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|121639553|ref|YP_979777.1| - 7e-08 32.8 0.0 1.6e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain SnoaL_4 PF13577.6 gi|121639553|ref|YP_979777.1| - 0.054 13.6 0.4 6 7.0 0.0 2.5 1 1 0 2 2 2 0 SnoaL-like domain Fic PF02661.18 gi|121639554|ref|YP_979778.1| - 2.8e-15 57.0 0.0 4.8e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 Fic/DOC family VbhA PF18495.1 gi|121639555|ref|YP_979779.1| - 5.1e-16 58.3 7.1 6.3e-16 58.0 7.1 1.1 1 0 0 1 1 1 1 Antitoxin VbhA DNA_pol3_delta2 PF13177.6 gi|121639557|ref|YP_979781.1| - 3e-35 121.4 0.0 4.4e-35 120.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 gi|121639557|ref|YP_979781.1| - 5.1e-05 23.7 0.0 0.00021 21.7 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNApol3-delta_C PF09115.10 gi|121639557|ref|YP_979781.1| - 0.0004 20.9 0.0 0.00088 19.8 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase III, delta subunit, C terminal AAA_22 PF13401.6 gi|121639557|ref|YP_979781.1| - 0.0021 18.3 0.0 0.0061 16.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|121639557|ref|YP_979781.1| - 0.044 13.8 0.3 0.64 10.0 0.3 2.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|121639557|ref|YP_979781.1| - 2.4 8.5 13.5 1 9.7 0.6 4.0 2 2 0 2 2 2 0 AAA ATPase domain Guanylate_cyc PF00211.20 gi|121639558|ref|YP_979782.1| - 1.4e-20 73.7 0.0 2.3e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain HAMP PF00672.25 gi|121639558|ref|YP_979782.1| - 1.4e-09 38.2 0.1 4.1e-09 36.7 0.1 1.9 1 0 0 1 1 1 1 HAMP domain Topoisom_bac PF01131.20 gi|121639559|ref|YP_979783.1| - 1.9e-115 386.2 0.0 2.4e-115 385.9 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim_C_rpt PF13368.6 gi|121639559|ref|YP_979783.1| - 6.7e-64 211.7 1.9 3.4e-21 75.0 0.0 4.5 4 0 0 4 4 4 4 Topoisomerase C-terminal repeat Toprim PF01751.22 gi|121639559|ref|YP_979783.1| - 2.5e-28 98.3 0.0 6.2e-28 97.0 0.0 1.7 1 0 0 1 1 1 1 Toprim domain Toprim_4 PF13662.6 gi|121639559|ref|YP_979783.1| - 5e-06 26.9 0.0 3.3e-05 24.3 0.0 2.5 2 1 0 2 2 2 1 Toprim domain CSD PF00313.22 gi|121639561|ref|YP_979785.1| - 2.7e-31 107.2 0.1 2.9e-31 107.1 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|121639561|ref|YP_979785.1| - 0.00015 21.3 0.1 0.0002 21.0 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DEAD PF00270.29 gi|121639562|ref|YP_979786.1| - 5e-20 72.0 0.0 7.8e-20 71.4 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|121639562|ref|YP_979786.1| - 2e-19 70.1 0.1 7.4e-19 68.3 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|121639562|ref|YP_979786.1| - 1.2e-09 38.4 0.0 2.2e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PE PF00934.20 gi|121639563|ref|YP_979787.1| - 3.3e-29 101.1 17.2 3.8e-29 100.8 17.2 1.0 1 0 0 1 1 1 1 PE family LacAB_rpiB PF02502.18 gi|121639563|ref|YP_979787.1| - 0.023 14.7 2.7 0.027 14.4 2.7 1.3 1 1 0 1 1 1 0 Ribose/Galactose Isomerase DUF5628 PF18621.1 gi|121639564|ref|YP_979788.1| - 1.1e-53 180.4 0.0 2.2e-53 179.4 0.0 1.6 1 0 0 1 1 1 1 Family of unknown function (DUF5628) DUF5593 PF18007.1 gi|121639564|ref|YP_979788.1| - 1.5e-33 115.3 0.2 4.7e-33 113.8 0.2 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF5593) DUF3489 PF11994.8 gi|121639564|ref|YP_979788.1| - 0.094 12.8 0.3 6 7.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3489) PE PF00934.20 gi|121639565|ref|YP_979789.1| - 6.6e-19 68.0 9.1 7.8e-19 67.8 9.1 1.1 1 0 0 1 1 1 1 PE family DUF3482 PF11981.8 gi|121639565|ref|YP_979789.1| - 0.074 12.4 3.2 0.084 12.3 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Tad PF13400.6 gi|121639567|ref|YP_979791.1| - 0.0074 16.6 11.3 0.0074 16.6 11.3 3.0 3 0 0 3 3 3 1 Putative Flp pilus-assembly TadE/G-like TadE PF07811.12 gi|121639568|ref|YP_979792.1| - 0.017 15.4 4.1 0.017 15.4 4.1 1.9 2 0 0 2 2 2 0 TadE-like protein NPDC1 PF06809.11 gi|121639568|ref|YP_979792.1| - 0.059 12.4 1.7 0.073 12.1 1.7 1.1 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) GHMP_kinases_N PF00288.26 gi|121639568|ref|YP_979792.1| - 2.5 8.4 6.3 2 8.7 2.9 2.0 2 0 0 2 2 2 0 GHMP kinases N terminal domain DUF4244 PF14029.6 gi|121639569|ref|YP_979793.1| - 6.5e-23 79.9 4.7 8e-23 79.6 4.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4244) T2SSF PF00482.23 gi|121639570|ref|YP_979794.1| - 3.1e-14 53.0 0.6 4.1e-14 52.6 0.6 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F T2SSF PF00482.23 gi|121639571|ref|YP_979795.1| - 3.3e-09 36.7 4.4 3.3e-09 36.7 4.4 2.2 1 1 1 2 2 2 1 Type II secretion system (T2SS), protein F Spore_III_AB PF09548.10 gi|121639571|ref|YP_979795.1| - 5.6e-05 23.3 0.1 0.00015 21.9 0.0 1.7 2 0 0 2 2 2 1 Stage III sporulation protein AB (spore_III_AB) T2SSE PF00437.20 gi|121639572|ref|YP_979796.1| - 3.4e-70 236.2 0.1 4.1e-70 235.9 0.1 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|121639572|ref|YP_979796.1| - 0.00046 19.5 0.0 0.0008 18.7 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin ABC_tran PF00005.27 gi|121639572|ref|YP_979796.1| - 0.00074 20.0 0.0 0.0011 19.4 0.0 1.5 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|121639572|ref|YP_979796.1| - 0.004 17.5 1.1 0.0087 16.5 0.3 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|121639572|ref|YP_979796.1| - 0.0055 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121639572|ref|YP_979796.1| - 0.0067 17.0 0.1 0.01 16.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|121639572|ref|YP_979796.1| - 0.02 14.3 0.3 0.075 12.4 0.3 1.9 1 1 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 gi|121639572|ref|YP_979796.1| - 0.042 13.4 0.0 0.073 12.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|121639572|ref|YP_979796.1| - 0.043 14.1 0.0 0.099 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|121639572|ref|YP_979796.1| - 0.05 13.2 0.0 0.091 12.3 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|121639572|ref|YP_979796.1| - 0.093 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TrwB_AAD_bind PF10412.9 gi|121639572|ref|YP_979796.1| - 0.094 11.6 0.1 0.19 10.6 0.0 1.5 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain MukB PF04310.12 gi|121639572|ref|YP_979796.1| - 0.094 12.5 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 MukB N-terminal AAA_28 PF13521.6 gi|121639572|ref|YP_979796.1| - 0.11 12.7 1.1 0.44 10.8 0.0 2.4 3 0 0 3 3 3 0 AAA domain CbiA PF01656.23 gi|121639573|ref|YP_979797.1| - 0.023 14.8 0.1 0.046 13.8 0.1 1.8 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|121639573|ref|YP_979797.1| - 0.045 13.7 1.7 6.8 6.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain CBP_BcsQ PF06564.12 gi|121639573|ref|YP_979797.1| - 0.58 9.6 2.9 9.9 5.6 0.5 2.3 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ HAD PF12710.7 gi|121639574|ref|YP_979798.1| - 3.4e-32 112.4 0.1 4.2e-32 112.1 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121639574|ref|YP_979798.1| - 1.2e-07 32.2 0.1 2.1e-07 31.4 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121639574|ref|YP_979798.1| - 0.0012 18.6 0.0 0.0025 17.6 0.0 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PH_4 PF15404.6 gi|121639574|ref|YP_979798.1| - 0.21 11.4 0.0 0.32 10.8 0.0 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain ABC_tran PF00005.27 gi|121639576|ref|YP_979800.1| - 2.1e-57 193.5 0.0 5.9e-29 101.3 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|121639576|ref|YP_979800.1| - 1.3e-12 48.1 0.3 6.8e-05 23.3 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|121639576|ref|YP_979800.1| - 3.6e-11 43.5 1.8 3.9e-05 23.9 0.0 3.6 2 2 0 2 2 2 2 AAA domain DUF87 PF01935.17 gi|121639576|ref|YP_979800.1| - 2.6e-09 37.5 0.1 0.0017 18.5 0.0 2.3 2 0 0 2 2 2 2 Helicase HerA, central domain AAA_16 PF13191.6 gi|121639576|ref|YP_979800.1| - 3.2e-09 37.4 7.1 6.8e-05 23.3 0.5 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|121639576|ref|YP_979800.1| - 1.3e-08 34.4 1.7 0.0015 18.2 0.0 2.3 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|121639576|ref|YP_979800.1| - 2.3e-08 34.2 8.1 0.042 13.7 0.1 4.1 2 2 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|121639576|ref|YP_979800.1| - 4.9e-08 32.7 0.4 0.0076 15.7 0.0 3.7 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 gi|121639576|ref|YP_979800.1| - 2e-05 24.6 1.9 0.11 12.4 0.2 2.5 2 0 0 2 2 2 2 NACHT domain RsgA_GTPase PF03193.16 gi|121639576|ref|YP_979800.1| - 2.5e-05 24.2 0.4 0.084 12.8 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Mg_chelatase PF01078.21 gi|121639576|ref|YP_979800.1| - 2.7e-05 23.7 0.1 0.32 10.4 0.0 2.8 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|121639576|ref|YP_979800.1| - 3.3e-05 24.1 0.2 0.31 11.2 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_24 PF13479.6 gi|121639576|ref|YP_979800.1| - 5.5e-05 23.0 0.2 0.28 10.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|121639576|ref|YP_979800.1| - 0.00014 21.6 0.2 0.75 9.5 0.0 2.8 2 0 0 2 2 2 2 Sigma-54 interaction domain MMR_HSR1 PF01926.23 gi|121639576|ref|YP_979800.1| - 0.00027 21.0 0.6 0.88 9.7 0.1 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|121639576|ref|YP_979800.1| - 0.00028 21.4 0.2 1.1 9.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|121639576|ref|YP_979800.1| - 0.00029 20.8 0.4 0.51 10.3 0.0 2.9 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|121639576|ref|YP_979800.1| - 0.00034 20.0 1.4 0.085 12.1 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin AAA_25 PF13481.6 gi|121639576|ref|YP_979800.1| - 0.00034 20.2 0.2 1.2 8.6 0.0 3.6 3 0 0 3 3 3 1 AAA domain NB-ARC PF00931.22 gi|121639576|ref|YP_979800.1| - 0.00042 19.6 0.1 0.16 11.2 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain ATPase PF06745.13 gi|121639576|ref|YP_979800.1| - 0.00099 18.5 0.3 0.73 9.1 0.0 2.5 2 0 0 2 2 2 1 KaiC AAA_7 PF12775.7 gi|121639576|ref|YP_979800.1| - 0.0012 18.4 0.4 0.34 10.4 0.1 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region APS_kinase PF01583.20 gi|121639576|ref|YP_979800.1| - 0.0012 18.7 0.2 1.4 8.8 0.0 2.5 2 0 0 2 2 2 2 Adenylylsulphate kinase IstB_IS21 PF01695.17 gi|121639576|ref|YP_979800.1| - 0.0014 18.3 0.2 1.4 8.6 0.0 2.6 2 0 0 2 2 2 1 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 gi|121639576|ref|YP_979800.1| - 0.0015 17.9 0.6 1.6 8.0 0.1 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family T2SSE PF00437.20 gi|121639576|ref|YP_979800.1| - 0.0018 17.4 0.9 0.22 10.6 0.1 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein CbiA PF01656.23 gi|121639576|ref|YP_979800.1| - 0.002 18.2 1.9 1.3 9.0 1.2 2.6 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain PRK PF00485.18 gi|121639576|ref|YP_979800.1| - 0.002 17.9 1.0 1.2 8.8 0.0 2.6 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family TniB PF05621.11 gi|121639576|ref|YP_979800.1| - 0.0024 17.3 2.6 3 7.2 0.1 4.0 4 0 0 4 4 4 1 Bacterial TniB protein DUF3987 PF13148.6 gi|121639576|ref|YP_979800.1| - 0.003 16.7 1.1 0.52 9.3 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF3987) AAA PF00004.29 gi|121639576|ref|YP_979800.1| - 0.0062 17.0 0.5 4.9 7.6 0.0 3.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|121639576|ref|YP_979800.1| - 0.0074 16.2 0.6 2 8.3 0.0 2.4 2 0 0 2 2 2 1 NTPase RNA_helicase PF00910.22 gi|121639576|ref|YP_979800.1| - 0.013 15.9 0.3 4.8 7.6 0.0 2.3 2 0 0 2 2 2 0 RNA helicase TrwB_AAD_bind PF10412.9 gi|121639576|ref|YP_979800.1| - 0.021 13.7 0.0 1.2 8.0 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 gi|121639576|ref|YP_979800.1| - 0.025 14.2 0.1 3.9 7.0 0.0 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_18 PF13238.6 gi|121639576|ref|YP_979800.1| - 0.026 15.1 0.0 9.7 6.8 0.0 2.8 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 gi|121639576|ref|YP_979800.1| - 0.055 13.5 4.5 1.3 9.0 0.5 2.3 2 0 0 2 2 2 0 Dynamin family G-alpha PF00503.20 gi|121639576|ref|YP_979800.1| - 0.061 12.5 0.0 3.5 6.7 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit ABC_ATPase PF09818.9 gi|121639576|ref|YP_979800.1| - 0.064 12.0 2.4 3.9 6.2 0.1 3.9 4 1 0 4 4 4 0 Predicted ATPase of the ABC class AAA_30 PF13604.6 gi|121639576|ref|YP_979800.1| - 0.084 12.6 16.2 4.4 7.0 5.2 4.7 3 2 2 5 5 5 0 AAA domain MobB PF03205.14 gi|121639576|ref|YP_979800.1| - 0.096 12.6 0.6 4.6 7.1 0.1 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_10 PF12846.7 gi|121639576|ref|YP_979800.1| - 0.096 11.6 0.5 3.4 6.5 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain DLIC PF05783.11 gi|121639576|ref|YP_979800.1| - 0.19 10.5 0.1 11 4.7 0.0 2.2 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) TsaE PF02367.17 gi|121639576|ref|YP_979800.1| - 0.2 11.7 0.4 9.9 6.2 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AIG1 PF04548.16 gi|121639576|ref|YP_979800.1| - 0.2 10.9 4.9 0.32 10.3 0.5 2.3 2 0 0 2 2 2 0 AIG1 family AAA_15 PF13175.6 gi|121639576|ref|YP_979800.1| - 0.22 11.2 0.0 24 4.5 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_19 PF13245.6 gi|121639576|ref|YP_979800.1| - 0.26 11.6 2.5 19 5.5 0.2 3.7 5 0 0 5 5 4 0 AAA domain Septin PF00735.18 gi|121639576|ref|YP_979800.1| - 0.26 10.5 1.2 8.3 5.6 0.1 2.1 2 0 0 2 2 2 0 Septin ATP_bind_1 PF03029.17 gi|121639576|ref|YP_979800.1| - 0.31 10.8 2.4 24 4.6 0.3 2.9 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Roc PF08477.13 gi|121639576|ref|YP_979800.1| - 0.63 10.3 1.6 11 6.3 0.1 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Cytidylate_kin PF02224.18 gi|121639576|ref|YP_979800.1| - 1.8 8.2 6.0 8.4 6.1 0.1 3.3 3 0 0 3 3 3 0 Cytidylate kinase BPD_transp_1 PF00528.22 gi|121639577|ref|YP_979801.1| - 4.4e-30 104.8 13.9 4.4e-30 104.8 13.9 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121639578|ref|YP_979802.1| - 1e-34 119.9 15.8 1e-34 119.9 15.8 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|121639579|ref|YP_979803.1| - 1.6e-46 159.0 0.3 2e-46 158.7 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle AMP-binding PF00501.28 gi|121639580|ref|YP_979804.1| - 2.9e-96 322.7 0.0 4e-96 322.2 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|121639580|ref|YP_979804.1| - 3.8e-27 95.1 2.3 9.2e-27 93.8 2.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|121639580|ref|YP_979804.1| - 3.7e-22 78.0 0.9 3.7e-22 78.0 0.9 2.3 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus Trypsin_2 PF13365.6 gi|121639581|ref|YP_979805.1| - 0.13 13.1 6.3 0.28 12.1 6.3 1.6 1 1 0 1 1 1 0 Trypsin-like peptidase domain Phage_holin_3_6 PF07332.11 gi|121639582|ref|YP_979806.1| - 6e-30 103.6 7.2 7e-30 103.4 7.2 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III DUF973 PF06157.11 gi|121639582|ref|YP_979806.1| - 0.0048 16.0 0.6 0.0065 15.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF973) Tmp39 PF10271.9 gi|121639582|ref|YP_979806.1| - 0.0049 15.9 0.0 0.0058 15.7 0.0 1.1 1 0 0 1 1 1 1 Putative transmembrane protein VIT1 PF01988.19 gi|121639582|ref|YP_979806.1| - 0.019 14.9 0.9 0.024 14.5 0.9 1.1 1 0 0 1 1 1 0 VIT family Colicin_V PF02674.16 gi|121639582|ref|YP_979806.1| - 0.12 12.3 8.7 0.18 11.8 8.7 1.1 1 0 0 1 1 1 0 Colicin V production protein DUF2207 PF09972.9 gi|121639582|ref|YP_979806.1| - 0.19 10.4 2.6 0.22 10.2 2.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ndc1_Nup PF09531.10 gi|121639582|ref|YP_979806.1| - 0.38 9.4 3.5 0.45 9.1 3.5 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup S_2TMBeta PF18153.1 gi|121639582|ref|YP_979806.1| - 0.41 10.4 1.7 0.51 10.1 1.7 1.2 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Abhydrolase_6 PF12697.7 gi|121639583|ref|YP_979807.1| - 2.1e-20 74.3 12.9 3e-20 73.8 12.9 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|121639583|ref|YP_979807.1| - 1e-19 71.2 0.2 1.8e-19 70.4 0.2 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|121639583|ref|YP_979807.1| - 2.3e-08 33.6 0.2 9.8e-08 31.5 0.2 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Trypsin_2 PF13365.6 gi|121639584|ref|YP_979808.1| - 4e-23 83.0 4.6 4.2e-23 82.9 1.5 2.3 2 0 0 2 2 2 1 Trypsin-like peptidase domain Colicin_V PF02674.16 gi|121639584|ref|YP_979808.1| - 1.1e-12 48.1 11.4 1.9e-12 47.4 11.4 1.4 1 0 0 1 1 1 1 Colicin V production protein Trypsin PF00089.26 gi|121639584|ref|YP_979808.1| - 7.2e-11 42.3 0.1 1e-09 38.6 0.1 2.3 1 1 0 1 1 1 1 Trypsin Peptidase_S3 PF00944.19 gi|121639584|ref|YP_979808.1| - 0.005 16.7 0.2 0.011 15.5 0.2 1.6 1 0 0 1 1 1 1 Alphavirus core protein NUDIX PF00293.28 gi|121639585|ref|YP_979809.1| - 1.5e-12 47.7 0.0 2.3e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain Redoxin PF08534.10 gi|121639586|ref|YP_979810.1| - 3.4e-10 39.8 0.0 4.8e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|121639586|ref|YP_979810.1| - 5.3e-10 39.3 0.0 7.5e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|121639586|ref|YP_979810.1| - 5.2e-07 29.9 0.0 7.3e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|121639586|ref|YP_979810.1| - 0.00061 19.7 0.0 0.001 19.0 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin CIDE-N PF02017.15 gi|121639586|ref|YP_979810.1| - 0.052 13.6 0.5 1 9.4 0.0 2.6 3 0 0 3 3 3 0 CIDE-N domain DUF2568 PF10823.8 gi|121639586|ref|YP_979810.1| - 0.3 11.4 7.0 0.35 11.2 1.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2568) HhH-GPD PF00730.25 gi|121639587|ref|YP_979811.1| - 2.3e-22 79.5 0.0 3.2e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|121639587|ref|YP_979811.1| - 9.1e-10 37.9 0.4 2.9e-09 36.3 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|121639587|ref|YP_979811.1| - 9.6e-05 22.6 5.1 0.00017 21.8 5.1 1.4 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|121639587|ref|YP_979811.1| - 0.11 13.1 0.1 0.87 10.2 0.0 2.3 2 1 0 2 2 2 0 Helix-hairpin-helix domain cNMP_binding PF00027.29 gi|121639589|ref|YP_979813.1| - 5.3e-23 80.9 0.0 9e-23 80.2 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 gi|121639589|ref|YP_979813.1| - 2.3e-17 62.7 2.0 3e-17 62.4 0.7 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 gi|121639589|ref|YP_979813.1| - 4e-05 23.2 0.0 9.9e-05 21.9 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family MarR_2 PF12802.7 gi|121639589|ref|YP_979813.1| - 5.2e-05 23.1 0.3 0.0002 21.2 0.3 2.1 1 1 0 1 1 1 1 MarR family GntR PF00392.21 gi|121639589|ref|YP_979813.1| - 0.00019 21.0 0.3 0.00061 19.4 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Sigma70_r4 PF04545.16 gi|121639589|ref|YP_979813.1| - 0.0002 20.8 0.0 0.00048 19.6 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|121639589|ref|YP_979813.1| - 0.00051 19.5 0.2 0.0027 17.2 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 gi|121639589|ref|YP_979813.1| - 0.0011 18.9 0.5 0.011 15.8 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn helix HTH_3 PF01381.22 gi|121639589|ref|YP_979813.1| - 0.0016 18.5 0.1 0.079 13.0 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix Sigma70_r4_2 PF08281.12 gi|121639589|ref|YP_979813.1| - 0.0022 17.6 0.0 0.0056 16.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_28 PF13518.6 gi|121639589|ref|YP_979813.1| - 0.0046 17.0 1.4 0.029 14.5 0.1 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|121639589|ref|YP_979813.1| - 0.0054 16.7 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121639589|ref|YP_979813.1| - 0.0056 16.4 0.0 0.019 14.7 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain HTH_31 PF13560.6 gi|121639589|ref|YP_979813.1| - 0.0066 16.8 2.1 0.35 11.3 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|121639589|ref|YP_979813.1| - 0.0095 15.7 0.6 0.057 13.2 0.0 2.3 2 1 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 gi|121639589|ref|YP_979813.1| - 0.016 15.1 0.0 0.11 12.4 0.0 2.3 3 0 0 3 3 3 0 MarR family Rrf2 PF02082.20 gi|121639589|ref|YP_979813.1| - 0.019 15.3 0.1 0.76 10.2 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulator HTH_AsnC-type PF13404.6 gi|121639589|ref|YP_979813.1| - 0.026 14.4 2.1 2.2 8.2 0.1 2.9 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_38 PF13936.6 gi|121639589|ref|YP_979813.1| - 0.04 13.7 0.5 0.2 11.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|121639589|ref|YP_979813.1| - 0.055 13.4 0.0 0.095 12.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Phage_min_cap2 PF06152.11 gi|121639589|ref|YP_979813.1| - 0.081 11.8 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Phage minor capsid protein 2 Lactamase_B PF00753.27 gi|121639590|ref|YP_979814.1| - 1.4e-14 54.6 10.4 5.2e-13 49.4 10.4 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|121639590|ref|YP_979814.1| - 1.5e-06 27.8 2.7 5.6e-06 26.0 2.7 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain BLACT_WH PF17778.1 gi|121639590|ref|YP_979814.1| - 4.6e-06 26.5 0.9 9.7e-06 25.5 0.1 2.1 3 0 0 3 3 3 1 Beta-lactamase associated winged helix domain Lactamase_B_3 PF13483.6 gi|121639590|ref|YP_979814.1| - 0.00034 20.5 0.0 0.00056 19.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain YjgF_endoribonc PF14588.6 gi|121639591|ref|YP_979815.1| - 2.5e-32 112.1 0.3 2.8e-32 111.9 0.3 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 gi|121639591|ref|YP_979815.1| - 1.3e-28 99.4 0.1 1.6e-28 99.1 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4177 PF13783.6 gi|121639592|ref|YP_979816.1| - 3.5e-06 27.2 0.0 5.6e-06 26.5 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4177) ArsA_ATPase PF02374.15 gi|121639593|ref|YP_979817.1| - 8.6e-23 81.0 0.0 1.5e-15 57.2 0.0 2.1 1 1 1 2 2 2 2 Anion-transporting ATPase CbiA PF01656.23 gi|121639593|ref|YP_979817.1| - 1.4e-08 34.8 0.0 4.2e-08 33.3 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|121639593|ref|YP_979817.1| - 1e-06 28.8 1.3 1.1e-05 25.4 1.3 2.2 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|121639593|ref|YP_979817.1| - 6.8e-06 25.7 1.5 1.3e-05 24.7 0.0 2.1 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_25 PF13481.6 gi|121639593|ref|YP_979817.1| - 4.7e-05 23.0 0.5 0.00012 21.7 0.5 1.6 1 0 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|121639593|ref|YP_979817.1| - 0.00042 19.7 0.3 0.00042 19.7 0.3 2.3 3 1 0 3 3 3 1 ATPase MipZ Fer4_NifH PF00142.18 gi|121639593|ref|YP_979817.1| - 0.0012 18.3 0.2 0.0026 17.2 0.1 1.6 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|121639593|ref|YP_979817.1| - 0.0027 17.2 0.1 0.0048 16.4 0.1 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA_30 PF13604.6 gi|121639593|ref|YP_979817.1| - 0.0042 16.8 1.4 0.013 15.3 1.4 1.8 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|121639593|ref|YP_979817.1| - 0.0058 16.4 0.4 0.014 15.2 0.4 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase PF06745.13 gi|121639593|ref|YP_979817.1| - 0.014 14.7 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 gi|121639593|ref|YP_979817.1| - 0.018 14.7 0.4 0.039 13.7 0.4 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein APS_kinase PF01583.20 gi|121639593|ref|YP_979817.1| - 0.033 14.1 0.2 0.078 12.9 0.2 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_16 PF13191.6 gi|121639593|ref|YP_979817.1| - 0.047 14.1 0.4 0.047 14.1 0.4 2.0 1 1 1 2 2 2 0 AAA ATPase domain MeaB PF03308.16 gi|121639593|ref|YP_979817.1| - 0.052 12.5 1.7 0.07 12.1 0.8 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 gi|121639593|ref|YP_979817.1| - 0.086 13.1 0.1 0.25 11.6 0.1 1.7 1 0 0 1 1 1 0 AAA domain Helicase_RecD PF05127.14 gi|121639593|ref|YP_979817.1| - 0.095 12.5 0.0 0.65 9.8 0.0 2.0 2 0 0 2 2 2 0 Helicase NACHT PF05729.12 gi|121639593|ref|YP_979817.1| - 0.1 12.5 0.6 0.19 11.6 0.6 1.4 1 0 0 1 1 1 0 NACHT domain SRP54 PF00448.22 gi|121639593|ref|YP_979817.1| - 0.12 12.0 1.2 0.22 11.1 0.7 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 gi|121639593|ref|YP_979817.1| - 0.15 12.6 0.2 0.28 11.7 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|121639593|ref|YP_979817.1| - 0.18 11.5 0.2 0.32 10.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|121639593|ref|YP_979817.1| - 0.23 10.7 0.5 0.32 10.2 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|121639593|ref|YP_979817.1| - 0.32 11.5 1.3 1.1 9.8 0.9 2.0 2 0 0 2 2 2 0 AAA domain ArsA_ATPase PF02374.15 gi|121639594|ref|YP_979818.1| - 4.2e-26 91.8 0.0 8.3e-26 90.9 0.0 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 gi|121639594|ref|YP_979818.1| - 5.7e-11 42.6 0.0 9.5e-11 41.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121639594|ref|YP_979818.1| - 2.4e-08 34.1 0.0 1.5e-07 31.6 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|121639594|ref|YP_979818.1| - 3.3e-08 33.3 0.1 3.4e-06 26.7 0.1 2.7 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 gi|121639594|ref|YP_979818.1| - 0.00023 20.8 0.4 0.00058 19.5 0.2 1.8 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|121639594|ref|YP_979818.1| - 0.00031 20.5 1.2 0.00049 19.9 0.2 1.8 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|121639594|ref|YP_979818.1| - 0.00043 19.3 1.0 0.0021 17.1 0.3 2.1 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 gi|121639594|ref|YP_979818.1| - 0.0016 18.7 0.1 0.0051 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|121639594|ref|YP_979818.1| - 0.0018 18.0 0.1 0.0039 16.9 0.1 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|121639594|ref|YP_979818.1| - 0.0029 17.9 0.2 0.011 16.0 0.1 2.0 2 2 0 2 2 2 1 AAA domain PhoH PF02562.16 gi|121639594|ref|YP_979818.1| - 0.0029 17.1 0.0 0.0048 16.4 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein AAA_33 PF13671.6 gi|121639594|ref|YP_979818.1| - 0.0037 17.4 0.2 0.01 16.0 0.0 1.9 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|121639594|ref|YP_979818.1| - 0.0059 17.0 0.3 0.039 14.3 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain CobA_CobO_BtuR PF02572.15 gi|121639594|ref|YP_979818.1| - 0.0061 16.8 0.9 0.04 14.2 0.6 2.1 2 0 0 2 2 2 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_26 PF13500.6 gi|121639594|ref|YP_979818.1| - 0.0091 15.8 0.0 0.33 10.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 gi|121639594|ref|YP_979818.1| - 0.0097 15.7 0.1 0.034 13.9 0.1 1.8 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein MipZ PF09140.11 gi|121639594|ref|YP_979818.1| - 0.011 15.1 0.4 0.47 9.7 0.2 2.3 1 1 0 2 2 2 0 ATPase MipZ Fer4_NifH PF00142.18 gi|121639594|ref|YP_979818.1| - 0.016 14.7 0.0 0.039 13.4 0.1 1.6 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YjeF_N PF03853.15 gi|121639594|ref|YP_979818.1| - 0.044 13.7 0.2 0.1 12.5 0.2 1.5 1 0 0 1 1 1 0 YjeF-related protein N-terminus TrkA_N PF02254.18 gi|121639594|ref|YP_979818.1| - 0.052 13.8 0.1 33 4.8 0.0 3.3 3 0 0 3 3 3 0 TrkA-N domain ATPase PF06745.13 gi|121639594|ref|YP_979818.1| - 0.12 11.7 0.0 0.26 10.6 0.0 1.4 1 0 0 1 1 1 0 KaiC AdoHcyase_NAD PF00670.21 gi|121639594|ref|YP_979818.1| - 0.14 12.2 0.3 0.25 11.4 0.3 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLP1_P PF16575.5 gi|121639594|ref|YP_979818.1| - 0.15 11.8 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 gi|121639594|ref|YP_979818.1| - 1.2 8.7 8.2 0.61 9.6 4.3 2.5 2 1 0 2 2 2 0 AAA domain Whib PF02467.16 gi|121639595|ref|YP_979819.1| - 1.5e-22 80.0 2.4 2.3e-22 79.4 2.4 1.3 1 0 0 1 1 1 1 Transcription factor WhiB DUF2800 PF10926.8 gi|121639595|ref|YP_979819.1| - 0.025 13.8 0.2 0.026 13.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) DUF1289 PF06945.13 gi|121639595|ref|YP_979819.1| - 0.12 12.3 3.3 0.78 9.6 0.0 3.3 3 1 1 4 4 4 0 Protein of unknown function (DUF1289) Transgly PF00912.22 gi|121639596|ref|YP_979820.1| - 8.6e-54 181.7 0.1 1.4e-53 181.0 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase Transpeptidase PF00905.22 gi|121639596|ref|YP_979820.1| - 1.9e-20 73.3 0.0 3.6e-20 72.4 0.0 1.4 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PASTA PF03793.19 gi|121639596|ref|YP_979820.1| - 7.1e-10 38.6 0.8 2.7e-09 36.7 0.8 2.1 1 0 0 1 1 1 1 PASTA domain CLLAC PF15675.5 gi|121639596|ref|YP_979820.1| - 2.2 7.9 5.1 4.9 6.8 5.1 1.5 1 0 0 1 1 1 0 CLLAC-motif containing domain Metallophos_2 PF12850.7 gi|121639597|ref|YP_979821.1| - 7.3e-11 42.5 0.0 2.6e-10 40.8 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|121639597|ref|YP_979821.1| - 7.1e-07 29.9 0.2 1.4e-06 28.9 0.2 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase PALP PF00291.25 gi|121639598|ref|YP_979822.1| - 2.6e-49 168.2 0.2 3.2e-49 167.9 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme p450 PF00067.22 gi|121639599|ref|YP_979823.1| - 7.2e-63 212.9 0.0 1e-62 212.4 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 GETHR PF05671.11 gi|121639600|ref|YP_979824.1| - 0.039 13.3 1.2 0.07 12.5 1.2 1.4 1 0 0 1 1 1 0 GETHR pentapeptide repeat (5 copies) STAS PF01740.21 gi|121639601|ref|YP_979825.1| - 1.2e-08 34.6 0.0 1.5e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 gi|121639601|ref|YP_979825.1| - 8e-05 22.9 0.0 0.00011 22.4 0.0 1.3 1 0 0 1 1 1 1 STAS domain YqeY PF09424.10 gi|121639602|ref|YP_979826.1| - 1.5e-45 154.8 5.3 1.7e-45 154.6 5.3 1.0 1 0 0 1 1 1 1 Yqey-like protein GatB_Yqey PF02637.18 gi|121639602|ref|YP_979826.1| - 0.0079 16.1 1.9 0.065 13.1 1.9 2.0 1 1 0 1 1 1 1 GatB domain GlnE PF03710.15 gi|121639602|ref|YP_979826.1| - 0.43 9.9 4.5 10 5.4 4.5 2.0 1 1 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase GPDPase_memb PF10110.9 gi|121639603|ref|YP_979827.1| - 0.0002 20.3 6.8 0.0002 20.3 6.8 2.0 2 1 1 3 3 3 1 Membrane domain of glycerophosphoryl diester phosphodiesterase UPF0259 PF06790.11 gi|121639603|ref|YP_979827.1| - 0.35 10.6 4.3 0.75 9.5 4.3 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) DUF4129 PF13559.6 gi|121639604|ref|YP_979828.1| - 1.5e-11 44.4 2.8 1.9e-11 44.0 1.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4129) Bestrophin PF01062.21 gi|121639604|ref|YP_979828.1| - 0.097 12.0 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel HemY_N PF07219.13 gi|121639604|ref|YP_979828.1| - 0.43 10.8 6.6 0.9 9.8 6.6 1.6 1 1 0 1 1 1 0 HemY protein N-terminus DUF4350 PF14258.6 gi|121639605|ref|YP_979829.1| - 5.1e-08 33.2 0.9 1.4e-07 31.8 0.9 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4350) XdhC_C PF13478.6 gi|121639605|ref|YP_979829.1| - 0.17 12.4 0.5 0.79 10.2 0.1 2.0 2 0 0 2 2 2 0 XdhC Rossmann domain AAA_3 PF07726.11 gi|121639606|ref|YP_979830.1| - 3.3e-63 211.4 0.1 4.5e-63 210.9 0.1 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|121639606|ref|YP_979830.1| - 3.2e-22 78.1 0.0 9.4e-22 76.6 0.0 1.9 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|121639606|ref|YP_979830.1| - 1.5e-14 54.2 0.0 2.4e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|121639606|ref|YP_979830.1| - 7.2e-06 25.3 0.0 1.4e-05 24.3 0.0 1.4 1 1 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|121639606|ref|YP_979830.1| - 2.7e-05 23.9 0.0 0.0016 18.2 0.0 2.1 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA PF00004.29 gi|121639606|ref|YP_979830.1| - 0.00025 21.5 0.0 0.00061 20.2 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|121639606|ref|YP_979830.1| - 0.00058 19.6 0.0 0.0038 17.0 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|121639606|ref|YP_979830.1| - 0.0018 17.7 0.9 0.021 14.2 0.2 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI DUF58 PF01882.18 gi|121639607|ref|YP_979831.1| - 1.9e-18 66.5 3.0 1.9e-18 66.5 0.9 2.2 2 0 0 2 2 2 1 Protein of unknown function DUF58 DUF11 PF01345.18 gi|121639607|ref|YP_979831.1| - 0.0037 17.5 0.1 0.014 15.6 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function DUF11 SpoIIM PF01944.17 gi|121639608|ref|YP_979832.1| - 2.5e-35 121.8 8.0 4e-35 121.2 8.0 1.3 1 0 0 1 1 1 1 Stage II sporulation protein M DUF3619 PF12279.8 gi|121639608|ref|YP_979832.1| - 0.053 13.9 0.1 0.053 13.9 0.1 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3619) RDD PF06271.12 gi|121639609|ref|YP_979833.1| - 3.7e-14 53.1 4.9 5.3e-14 52.6 4.9 1.3 1 0 0 1 1 1 1 RDD family FGGY_N PF00370.21 gi|121639610|ref|YP_979834.1| - 1.4e-69 234.4 0.0 1.8e-69 234.0 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|121639610|ref|YP_979834.1| - 6.7e-65 218.5 1.1 3.2e-64 216.3 1.2 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain PIN PF01850.21 gi|121639611|ref|YP_979835.1| - 2.7e-07 31.1 0.0 4.3e-07 30.5 0.0 1.4 1 1 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|121639612|ref|YP_979836.1| - 0.026 14.5 2.2 0.056 13.4 2.2 1.6 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|121639612|ref|YP_979836.1| - 0.048 13.6 0.3 0.068 13.1 0.3 1.2 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 RHH_4 PF13467.6 gi|121639612|ref|YP_979836.1| - 0.13 12.2 0.1 0.24 11.3 0.0 1.5 2 0 0 2 2 2 0 Ribbon-helix-helix domain VapB_antitoxin PF09957.9 gi|121639612|ref|YP_979836.1| - 1.9 8.5 7.7 0.19 11.7 2.6 2.1 2 1 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB GCS2 PF04107.13 gi|121639613|ref|YP_979837.1| - 1.3e-05 24.8 0.2 0.0049 16.3 0.3 2.4 2 1 0 2 2 2 2 Glutamate-cysteine ligase family 2(GCS2) Methyltransf_25 PF13649.6 gi|121639614|ref|YP_979838.1| - 3.9e-15 56.3 0.0 5.8e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|121639614|ref|YP_979838.1| - 5.9e-14 52.2 0.0 7.9e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_31 PF13847.6 gi|121639614|ref|YP_979838.1| - 6.4e-14 52.0 0.0 7.8e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|121639614|ref|YP_979838.1| - 1.7e-12 47.8 0.0 2.4e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639614|ref|YP_979838.1| - 1.7e-11 44.2 0.0 2.2e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121639614|ref|YP_979838.1| - 1.6e-08 35.2 0.0 2.3e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|121639614|ref|YP_979838.1| - 6.8e-05 22.9 0.0 8.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|121639614|ref|YP_979838.1| - 0.00013 21.5 0.1 0.00019 21.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|121639614|ref|YP_979838.1| - 0.0012 18.3 0.3 0.0019 17.6 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|121639614|ref|YP_979838.1| - 0.0016 17.9 0.0 0.0018 17.7 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|121639614|ref|YP_979838.1| - 0.0075 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family tRNA_U5-meth_tr PF05958.11 gi|121639614|ref|YP_979838.1| - 0.011 14.7 0.0 0.014 14.4 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CMAS PF02353.20 gi|121639614|ref|YP_979838.1| - 0.013 14.8 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase adh_short PF00106.25 gi|121639614|ref|YP_979838.1| - 0.11 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Methyltransf_4 PF02390.17 gi|121639614|ref|YP_979838.1| - 0.14 11.6 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase ECSIT PF06239.11 gi|121639614|ref|YP_979838.1| - 0.17 10.9 0.1 0.28 10.3 0.1 1.2 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway Aminotran_5 PF00266.19 gi|121639615|ref|YP_979839.1| - 1.5e-32 113.0 0.0 1.9e-32 112.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Methyltransf_33 PF10017.9 gi|121639616|ref|YP_979840.1| - 7.4e-114 380.0 0.0 8.4e-114 379.9 0.0 1.0 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent Methyltransf_11 PF08241.12 gi|121639616|ref|YP_979840.1| - 0.072 13.8 0.0 0.76 10.5 0.0 2.4 1 1 1 2 2 2 0 Methyltransferase domain GATase_6 PF13522.6 gi|121639617|ref|YP_979841.1| - 5.8e-14 52.4 0.1 8.1e-14 52.0 0.1 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|121639617|ref|YP_979841.1| - 1.3e-10 40.6 0.0 4.5e-09 35.6 0.0 2.5 2 1 1 3 3 3 1 Glutamine amidotransferases class-II FGE-sulfatase PF03781.16 gi|121639618|ref|YP_979842.1| - 1.8e-63 214.6 5.6 2.2e-63 214.3 5.6 1.1 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DinB_2 PF12867.7 gi|121639618|ref|YP_979842.1| - 3.5e-17 63.1 4.1 3.5e-17 63.1 4.1 2.3 2 1 0 2 2 2 1 DinB superfamily GCS2 PF04107.13 gi|121639619|ref|YP_979843.1| - 5e-96 321.5 0.2 6e-96 321.2 0.2 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) PknH_C PF14032.6 gi|121639620|ref|YP_979844.1| - 1.4e-38 132.7 6.1 1.6e-38 132.5 6.1 1.0 1 0 0 1 1 1 1 PknH-like extracellular domain DUF4185 PF13810.6 gi|121639623|ref|YP_979847.1| - 2.7e-47 161.5 0.1 3.1e-47 161.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4185) Semialdhyde_dhC PF02774.18 gi|121639624|ref|YP_979848.1| - 9.5e-46 156.2 0.0 1.4e-45 155.7 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|121639624|ref|YP_979848.1| - 2.8e-29 102.0 0.0 7.3e-29 100.7 0.0 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain AA_kinase PF00696.28 gi|121639625|ref|YP_979849.1| - 1.8e-54 184.9 3.0 3.3e-54 184.0 2.5 1.6 2 0 0 2 2 2 1 Amino acid kinase family ACT PF01842.25 gi|121639625|ref|YP_979849.1| - 3.1e-18 65.2 0.6 5.4e-11 42.1 0.1 2.8 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|121639625|ref|YP_979849.1| - 9.3e-17 60.6 0.1 1.3e-12 47.3 0.0 2.8 3 0 0 3 3 3 2 ACT domain ACT_6 PF13740.6 gi|121639625|ref|YP_979849.1| - 0.025 14.6 0.2 6.3 6.9 0.0 2.7 2 0 0 2 2 2 0 ACT domain HMGL-like PF00682.19 gi|121639626|ref|YP_979850.1| - 3.9e-76 256.1 0.0 1.4e-75 254.3 0.0 1.8 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|121639626|ref|YP_979850.1| - 5.9e-27 94.2 0.8 1.1e-18 67.4 0.1 2.4 2 0 0 2 2 2 2 LeuA allosteric (dimerisation) domain RNase_T PF00929.24 gi|121639627|ref|YP_979851.1| - 2.3e-19 70.6 0.0 3.1e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 Exonuclease DUF1727 PF08353.10 gi|121639628|ref|YP_979852.1| - 9.8e-25 86.6 0.0 5.2e-24 84.3 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1727) Mur_ligase_M PF08245.12 gi|121639628|ref|YP_979852.1| - 1.5e-16 61.0 0.0 6.7e-16 58.9 0.0 1.9 1 1 0 1 1 1 1 Mur ligase middle domain GATase_3 PF07685.14 gi|121639629|ref|YP_979853.1| - 1.2e-35 122.9 0.0 1.3e-35 122.7 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain MTES_1575 PF18741.1 gi|121639630|ref|YP_979854.1| - 3.2e-06 27.2 0.1 5.2e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 REase_MTES_1575 DUF559 PF04480.12 gi|121639630|ref|YP_979854.1| - 0.0012 18.7 0.1 0.002 18.0 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF559) Toprim_4 PF13662.6 gi|121639631|ref|YP_979855.1| - 2.2e-22 79.3 0.0 3.2e-22 78.8 0.0 1.3 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 gi|121639631|ref|YP_979855.1| - 2.9e-13 49.1 3.5 5.5e-13 48.2 3.5 1.5 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 gi|121639631|ref|YP_979855.1| - 2.2e-11 43.9 0.0 5.8e-11 42.5 0.0 1.6 2 0 0 2 2 2 1 Toprim domain HHH PF00633.23 gi|121639631|ref|YP_979855.1| - 7.3e-06 25.6 0.8 3.1e-05 23.6 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|121639631|ref|YP_979855.1| - 9.1e-05 23.0 0.3 0.0031 18.1 0.0 2.7 2 1 0 2 2 2 1 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|121639631|ref|YP_979855.1| - 0.015 15.7 0.0 0.051 13.9 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain IMS_HHH PF11798.8 gi|121639631|ref|YP_979855.1| - 0.05 14.0 0.1 0.33 11.4 0.0 2.4 2 0 0 2 2 2 0 IMS family HHH motif zinc_ribbon_2 PF13240.6 gi|121639631|ref|YP_979855.1| - 0.078 12.7 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 zinc-ribbon domain HHH_3 PF12836.7 gi|121639631|ref|YP_979855.1| - 0.083 13.2 0.0 0.3 11.4 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif YbaB_DNA_bd PF02575.16 gi|121639632|ref|YP_979856.1| - 1.1e-31 108.9 5.4 1.3e-31 108.7 5.4 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family Collagen PF01391.18 gi|121639632|ref|YP_979856.1| - 0.018 14.8 6.4 0.032 14.0 6.4 1.4 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) HutP PF09021.11 gi|121639632|ref|YP_979856.1| - 0.11 12.8 0.3 0.13 12.6 0.3 1.1 1 0 0 1 1 1 0 HutP Amidase_3 PF01520.18 gi|121639633|ref|YP_979857.1| - 2.9e-31 108.9 0.0 3.7e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase Polyketide_cyc2 PF10604.9 gi|121639634|ref|YP_979858.1| - 6.7e-23 81.5 0.7 7.6e-23 81.4 0.7 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport FAD_binding_4 PF01565.23 gi|121639635|ref|YP_979859.1| - 1.1e-09 38.2 0.1 1.7e-09 37.5 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain CMAS PF02353.20 gi|121639636|ref|YP_979860.1| - 1.3e-99 333.0 0.0 1.5e-99 332.8 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|121639636|ref|YP_979860.1| - 2.1e-10 41.1 0.0 5.1e-10 39.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639636|ref|YP_979860.1| - 3.3e-09 36.8 0.0 5.7e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121639636|ref|YP_979860.1| - 3.7e-09 37.2 0.0 1.2e-08 35.6 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121639636|ref|YP_979860.1| - 2.4e-05 25.0 0.0 6e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|121639636|ref|YP_979860.1| - 0.014 15.1 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|121639636|ref|YP_979860.1| - 0.015 14.9 0.0 0.025 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain PCMT PF01135.19 gi|121639636|ref|YP_979860.1| - 0.075 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|121639636|ref|YP_979860.1| - 0.093 12.5 0.0 0.3 10.9 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|121639636|ref|YP_979860.1| - 0.12 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DNA_pol3_delta2 PF13177.6 gi|121639637|ref|YP_979861.1| - 9.5e-38 129.5 0.0 1.4e-37 129.0 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit DNA_pol3_gamma3 PF12169.8 gi|121639637|ref|YP_979861.1| - 6.2e-15 55.4 0.4 1.2e-14 54.4 0.4 1.5 1 0 0 1 1 1 1 DNA polymerase III subunits gamma and tau domain III AAA PF00004.29 gi|121639637|ref|YP_979861.1| - 1.8e-10 41.3 0.0 5.4e-10 39.8 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|121639637|ref|YP_979861.1| - 5.4e-07 30.0 0.0 4.8e-06 26.9 0.0 2.6 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|121639637|ref|YP_979861.1| - 1.7e-06 27.9 0.0 4.1e-06 26.6 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_30 PF13604.6 gi|121639637|ref|YP_979861.1| - 3.9e-05 23.4 0.0 0.00014 21.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|121639637|ref|YP_979861.1| - 0.0011 19.4 0.1 0.0087 16.4 0.0 2.5 2 1 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 gi|121639637|ref|YP_979861.1| - 0.0011 18.4 0.0 0.0033 16.8 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|121639637|ref|YP_979861.1| - 0.0029 18.0 5.1 0.0049 17.3 0.0 3.5 2 2 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 gi|121639637|ref|YP_979861.1| - 0.0048 16.8 0.0 0.0088 16.0 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_5 PF07728.14 gi|121639637|ref|YP_979861.1| - 0.014 15.4 0.0 4.3 7.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|121639637|ref|YP_979861.1| - 0.04 13.9 0.0 0.18 11.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|121639637|ref|YP_979861.1| - 0.19 12.3 0.0 0.68 10.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain CHAD PF05235.14 gi|121639637|ref|YP_979861.1| - 0.54 10.2 6.8 0.21 11.6 0.6 2.3 2 0 0 2 2 2 0 CHAD domain Aminotran_MocR PF12897.7 gi|121639638|ref|YP_979862.1| - 6.1e-180 598.5 0.0 6.9e-180 598.3 0.0 1.0 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase DUF1772 PF08592.11 gi|121639639|ref|YP_979863.1| - 0.0006 20.1 0.6 0.0096 16.2 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF1772) Cutinase PF01083.22 gi|121639640|ref|YP_979864.1| - 2.3e-46 158.0 0.3 2.7e-46 157.8 0.3 1.1 1 0 0 1 1 1 1 Cutinase Abhydrolase_2 PF02230.16 gi|121639640|ref|YP_979864.1| - 0.12 12.2 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase DUF2974 PF11187.8 gi|121639640|ref|YP_979864.1| - 0.19 11.3 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Epimerase PF01370.21 gi|121639641|ref|YP_979865.1| - 3.7e-20 72.4 0.0 8.9e-20 71.2 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121639641|ref|YP_979865.1| - 1.2e-14 54.1 0.0 1.7e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|121639641|ref|YP_979865.1| - 1.5e-14 54.3 0.7 2.9e-14 53.4 0.7 1.5 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|121639641|ref|YP_979865.1| - 3.2e-12 46.2 0.8 4.5e-10 39.1 0.8 2.7 1 1 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 gi|121639641|ref|YP_979865.1| - 4.9e-10 39.3 0.0 6.2e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 gi|121639641|ref|YP_979865.1| - 2.5e-09 37.1 0.0 1.1e-08 34.9 0.2 1.8 2 0 0 2 2 2 1 NmrA-like family Polysacc_synt_2 PF02719.15 gi|121639641|ref|YP_979865.1| - 1.3e-08 34.4 0.0 2.2e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein adh_short PF00106.25 gi|121639641|ref|YP_979865.1| - 2.8e-07 30.2 0.4 1.3e-06 28.0 0.4 1.9 1 1 0 1 1 1 1 short chain dehydrogenase RmlD_sub_bind PF04321.17 gi|121639641|ref|YP_979865.1| - 4.6e-07 29.2 0.1 6.4e-07 28.8 0.1 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain KR PF08659.10 gi|121639641|ref|YP_979865.1| - 7.2e-06 26.0 0.5 1.9e-05 24.7 0.5 1.6 1 1 0 1 1 1 1 KR domain adh_short_C2 PF13561.6 gi|121639641|ref|YP_979865.1| - 0.004 16.7 0.8 0.01 15.4 0.8 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ApbA PF02558.16 gi|121639641|ref|YP_979865.1| - 0.021 14.5 0.1 0.034 13.8 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Glyco_trans_4_4 PF13579.6 gi|121639641|ref|YP_979865.1| - 0.038 14.4 4.2 0.45 10.9 0.3 2.6 2 1 0 2 2 2 0 Glycosyl transferase 4-like domain 3HCDH_N PF02737.18 gi|121639641|ref|YP_979865.1| - 0.1 12.5 0.1 0.15 11.9 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 gi|121639642|ref|YP_979866.1| - 3.6e-11 43.2 0.2 5.8e-10 39.2 0.1 2.5 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121639642|ref|YP_979866.1| - 1e-10 41.5 0.1 1.1e-09 38.1 0.0 2.5 2 1 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 gi|121639642|ref|YP_979866.1| - 0.056 12.9 0.0 0.18 11.3 0.0 1.8 2 0 0 2 2 2 0 Glucose dehydrogenase C-terminus Amino_oxidase PF01593.24 gi|121639643|ref|YP_979867.1| - 3.7e-17 62.7 0.0 2e-16 60.4 0.0 2.1 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase MCRA PF06100.11 gi|121639643|ref|YP_979867.1| - 5.4e-12 45.3 0.0 0.00064 18.6 0.1 3.1 3 0 0 3 3 3 3 MCRA family NAD_binding_8 PF13450.6 gi|121639643|ref|YP_979867.1| - 1.5e-11 44.3 0.2 3.5e-11 43.2 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|121639643|ref|YP_979867.1| - 1.6e-10 41.1 0.1 1.5e-06 28.0 0.2 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|121639643|ref|YP_979867.1| - 3e-09 36.6 0.0 0.00032 20.0 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121639643|ref|YP_979867.1| - 2.8e-08 32.9 0.5 0.0042 15.8 4.0 2.3 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 gi|121639643|ref|YP_979867.1| - 3.4e-08 33.1 0.3 7.9e-06 25.4 1.1 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|121639643|ref|YP_979867.1| - 1.8e-07 30.6 6.8 0.00034 19.8 6.4 2.3 2 0 0 2 2 2 2 FAD binding domain Pyr_redox PF00070.27 gi|121639643|ref|YP_979867.1| - 8.5e-07 29.4 0.3 0.002 18.6 0.9 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|121639643|ref|YP_979867.1| - 1.9e-05 24.2 0.5 5.3e-05 22.7 0.9 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121639643|ref|YP_979867.1| - 0.00052 19.3 1.3 0.00088 18.6 1.3 1.3 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|121639643|ref|YP_979867.1| - 0.0022 17.1 3.2 0.0045 16.1 3.2 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|121639643|ref|YP_979867.1| - 0.0038 16.6 0.1 0.0061 15.9 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 gi|121639643|ref|YP_979867.1| - 0.026 14.5 0.0 11 5.9 0.1 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|121639643|ref|YP_979867.1| - 0.029 14.2 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|121639643|ref|YP_979867.1| - 0.11 13.0 0.1 0.21 12.1 0.1 1.5 1 0 0 1 1 1 0 XdhC Rossmann domain Trp_halogenase PF04820.14 gi|121639643|ref|YP_979867.1| - 0.55 9.0 4.2 0.81 8.5 3.3 1.6 2 0 0 2 2 2 0 Tryptophan halogenase MFS_1 PF07690.16 gi|121639644|ref|YP_979868.1| - 4.7e-46 157.3 68.9 8e-40 136.8 34.4 2.8 2 1 1 3 3 3 2 Major Facilitator Superfamily Patatin PF01734.22 gi|121639644|ref|YP_979868.1| - 8.4e-25 88.1 1.0 4e-24 85.9 1.0 2.2 1 1 0 1 1 1 1 Patatin-like phospholipase cNMP_binding PF00027.29 gi|121639644|ref|YP_979868.1| - 9.1e-20 70.5 0.1 2.3e-19 69.2 0.1 1.7 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Sugar_tr PF00083.24 gi|121639644|ref|YP_979868.1| - 4.1e-08 32.5 6.3 4.1e-08 32.5 6.3 2.4 2 0 0 2 2 2 1 Sugar (and other) transporter PUCC PF03209.15 gi|121639644|ref|YP_979868.1| - 0.00068 18.7 11.0 0.00068 18.7 11.0 3.6 2 1 2 4 4 4 1 PUCC protein MFS_1_like PF12832.7 gi|121639644|ref|YP_979868.1| - 0.0014 17.6 3.1 0.0014 17.6 3.1 2.2 2 0 0 2 2 2 1 MFS_1 like family Methyltransf_11 PF08241.12 gi|121639645|ref|YP_979869.1| - 2.5e-19 69.7 0.0 2.8e-18 66.4 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121639645|ref|YP_979869.1| - 8e-19 68.1 0.1 2.9e-18 66.4 0.1 2.0 1 0 0 1 1 1 1 Methyltransferase domain Radical_SAM PF04055.21 gi|121639645|ref|YP_979869.1| - 2.6e-17 63.7 2.2 4.3e-17 63.0 0.1 2.4 3 0 0 3 3 2 1 Radical SAM superfamily Methyltransf_31 PF13847.6 gi|121639645|ref|YP_979869.1| - 5.6e-17 61.9 0.0 1e-16 61.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639645|ref|YP_979869.1| - 3.1e-11 43.4 0.0 6.8e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|121639645|ref|YP_979869.1| - 2.3e-09 36.9 0.0 4.3e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|121639645|ref|YP_979869.1| - 3.7e-08 34.0 0.0 9.3e-08 32.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Fer4_12 PF13353.6 gi|121639645|ref|YP_979869.1| - 2.3e-07 31.1 0.0 5.7e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|121639645|ref|YP_979869.1| - 3.9e-06 27.0 1.1 6.5e-06 26.3 0.0 1.9 2 0 0 2 2 1 1 4Fe-4S single cluster domain CMAS PF02353.20 gi|121639645|ref|YP_979869.1| - 3.2e-05 23.4 0.0 5.6e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_20 PF12147.8 gi|121639645|ref|YP_979869.1| - 5.4e-05 22.5 0.0 0.0042 16.3 0.0 2.3 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_24 PF13578.6 gi|121639645|ref|YP_979869.1| - 0.024 15.7 0.0 0.36 11.9 0.0 2.8 3 0 0 3 3 3 0 Methyltransferase domain DNA_primase_S PF01896.19 gi|121639646|ref|YP_979870.1| - 2.2e-07 31.1 0.0 5.5e-06 26.5 0.0 2.5 2 1 0 2 2 2 1 DNA primase small subunit DNA_ligase_A_M PF01068.21 gi|121639647|ref|YP_979871.1| - 2.3e-39 135.2 0.0 3.4e-39 134.6 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 gi|121639647|ref|YP_979871.1| - 5.6e-15 55.8 0.0 1.3e-14 54.6 0.0 1.6 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|121639647|ref|YP_979871.1| - 0.013 15.8 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 RNA ligase DUF2330 PF10092.9 gi|121639648|ref|YP_979872.1| - 2.8e-75 253.3 0.3 1.6e-68 231.1 0.2 2.1 1 1 1 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2330) NUDIX PF00293.28 gi|121639649|ref|YP_979873.1| - 2e-14 53.7 0.0 2.5e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain WES_acyltransf PF03007.16 gi|121639650|ref|YP_979874.1| - 1.3e-99 333.3 0.6 1.8e-99 332.8 0.6 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639650|ref|YP_979874.1| - 9.2e-36 123.0 0.0 1.2e-34 119.4 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121639650|ref|YP_979874.1| - 0.0028 16.4 0.3 0.043 12.5 0.2 2.1 2 0 0 2 2 2 1 Condensation domain AATase PF07247.12 gi|121639650|ref|YP_979874.1| - 0.083 11.4 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Alcohol acetyltransferase Adenosine_kin PF04008.14 gi|121639651|ref|YP_979875.1| - 8.9e-73 243.2 0.0 1e-72 243.0 0.0 1.0 1 0 0 1 1 1 1 Adenosine specific kinase FliMN_C PF01052.20 gi|121639651|ref|YP_979875.1| - 0.24 11.4 1.5 2 8.5 0.1 2.3 2 0 0 2 2 2 0 Type III flagellar switch regulator (C-ring) FliN C-term Arabinose_bd PF12625.7 gi|121639652|ref|YP_979876.1| - 8.6e-36 123.8 4.8 8.6e-36 123.8 4.8 2.0 2 0 0 2 2 2 1 Arabinose-binding domain of AraC transcription regulator, N-term HTH_18 PF12833.7 gi|121639652|ref|YP_979876.1| - 4.8e-14 52.4 0.2 9.2e-14 51.5 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121639652|ref|YP_979876.1| - 1.5e-06 28.1 0.0 0.00049 20.1 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_28 PF13518.6 gi|121639652|ref|YP_979876.1| - 0.00042 20.4 0.7 0.69 10.1 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|121639652|ref|YP_979876.1| - 0.061 12.7 0.0 0.19 11.1 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_30 PF13556.6 gi|121639652|ref|YP_979876.1| - 0.11 12.3 0.1 0.38 10.6 0.1 1.9 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain LytR_C PF13399.6 gi|121639652|ref|YP_979876.1| - 0.12 13.3 0.5 0.94 10.5 0.4 2.5 2 1 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator ThrE PF06738.12 gi|121639653|ref|YP_979877.1| - 6.3e-68 228.7 37.4 4.3e-63 212.9 12.0 2.0 2 0 0 2 2 2 2 Putative threonine/serine exporter ThrE_2 PF12821.7 gi|121639653|ref|YP_979877.1| - 1.6e-13 50.9 12.3 1.6e-13 50.9 12.3 2.4 3 0 0 3 3 3 2 Threonine/Serine exporter, ThrE WES_acyltransf PF03007.16 gi|121639654|ref|YP_979878.1| - 4.8e-97 324.8 2.4 1.6e-96 323.2 1.3 1.9 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 gi|121639654|ref|YP_979878.1| - 2.6e-39 134.5 0.0 7.1e-39 133.0 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) Condensation PF00668.20 gi|121639654|ref|YP_979878.1| - 0.00015 20.6 0.1 0.017 13.8 0.1 2.1 2 0 0 2 2 2 2 Condensation domain DAO PF01266.24 gi|121639656|ref|YP_979880.1| - 2.4e-05 24.1 0.1 2.4e-05 24.1 0.1 1.6 1 1 1 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121639656|ref|YP_979880.1| - 9.6e-05 21.7 0.1 0.00035 19.9 0.0 1.7 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.14 gi|121639656|ref|YP_979880.1| - 0.00018 20.9 1.0 0.039 13.2 0.1 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Mqo PF06039.15 gi|121639656|ref|YP_979880.1| - 0.00056 18.6 0.0 0.0046 15.6 0.0 1.9 2 0 0 2 2 2 1 Malate:quinone oxidoreductase (Mqo) NAD_binding_8 PF13450.6 gi|121639656|ref|YP_979880.1| - 0.001 19.3 1.3 0.0087 16.3 0.0 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 gi|121639656|ref|YP_979880.1| - 0.0028 16.8 0.2 1.2 8.2 0.0 2.0 1 1 1 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 gi|121639656|ref|YP_979880.1| - 0.0035 17.9 0.6 1.8 9.2 0.0 2.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|121639656|ref|YP_979880.1| - 0.0043 17.1 0.1 2.2 8.3 0.0 2.1 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|121639656|ref|YP_979880.1| - 0.041 13.2 0.2 0.085 12.1 0.0 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain ThiF PF00899.21 gi|121639656|ref|YP_979880.1| - 0.15 11.4 0.3 0.99 8.7 0.1 2.3 2 1 0 2 2 2 0 ThiF family E1-E2_ATPase PF00122.20 gi|121639657|ref|YP_979881.1| - 6.5e-47 159.4 1.8 6.5e-47 159.4 1.8 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|121639657|ref|YP_979881.1| - 3.7e-39 135.2 3.6 6.7e-39 134.3 3.6 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|121639657|ref|YP_979881.1| - 0.0015 18.4 0.1 0.0026 17.6 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|121639657|ref|YP_979881.1| - 0.051 14.0 0.5 0.39 11.1 0.2 2.6 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase HTH_5 PF01022.20 gi|121639658|ref|YP_979882.1| - 3.6e-16 58.8 0.1 6.7e-16 57.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|121639658|ref|YP_979882.1| - 3.6e-12 46.1 0.5 5.7e-12 45.5 0.5 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|121639658|ref|YP_979882.1| - 1e-07 31.8 0.5 1.8e-07 30.9 0.3 1.5 1 1 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|121639658|ref|YP_979882.1| - 7.6e-06 25.6 0.2 1.5e-05 24.7 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|121639658|ref|YP_979882.1| - 4.1e-05 23.1 0.0 6.4e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|121639658|ref|YP_979882.1| - 4.7e-05 23.2 0.0 7.4e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|121639658|ref|YP_979882.1| - 0.00013 21.9 0.2 0.00019 21.3 0.2 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|121639658|ref|YP_979882.1| - 0.0003 20.6 0.0 0.00048 20.0 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|121639658|ref|YP_979882.1| - 0.00069 20.1 0.0 0.0011 19.4 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_9 PF08221.11 gi|121639658|ref|YP_979882.1| - 0.0038 17.3 0.1 0.013 15.5 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|121639658|ref|YP_979882.1| - 0.0097 15.7 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain DprA_WH PF17782.1 gi|121639658|ref|YP_979882.1| - 0.015 15.4 3.7 0.043 13.9 3.7 1.8 1 1 0 1 1 1 0 DprA winged helix domain HTH_1 PF00126.27 gi|121639658|ref|YP_979882.1| - 0.024 14.6 0.0 0.024 14.6 0.0 1.6 2 0 0 2 2 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Dimerisation2 PF16864.5 gi|121639658|ref|YP_979882.1| - 0.026 14.5 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 Dimerisation domain Rrf2 PF02082.20 gi|121639658|ref|YP_979882.1| - 0.026 14.8 0.1 0.034 14.5 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|121639658|ref|YP_979882.1| - 0.043 14.0 0.0 0.088 13.0 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HxlR PF01638.17 gi|121639658|ref|YP_979882.1| - 0.055 13.3 0.0 0.077 12.8 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HrcA_DNA-bdg PF03444.15 gi|121639658|ref|YP_979882.1| - 0.063 12.9 0.0 0.089 12.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_11 PF08279.12 gi|121639658|ref|YP_979882.1| - 0.079 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 HTH domain PaaX PF07848.12 gi|121639658|ref|YP_979882.1| - 0.1 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein CheW PF01584.19 gi|121639658|ref|YP_979882.1| - 0.13 11.9 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 CheW-like domain Cro PF09048.10 gi|121639658|ref|YP_979882.1| - 0.17 12.0 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Cro DUF2237 PF09996.9 gi|121639659|ref|YP_979883.1| - 2.9e-23 82.0 0.0 3.2e-23 81.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2237) PE PF00934.20 gi|121639660|ref|YP_979884.1| - 1.4e-10 41.3 5.9 1.8e-10 41.0 5.9 1.1 1 0 0 1 1 1 1 PE family YtkA PF13115.6 gi|121639662|ref|YP_979886.1| - 0.11 13.1 0.0 0.24 12.1 0.0 1.6 1 1 0 1 1 1 0 YtkA-like DUF4232 PF14016.6 gi|121639662|ref|YP_979886.1| - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) PIN_3 PF13470.6 gi|121639663|ref|YP_979887.1| - 0.0037 18.0 0.2 0.0073 17.1 0.2 1.5 1 0 0 1 1 1 1 PIN domain HTH_17 PF12728.7 gi|121639664|ref|YP_979888.1| - 2.8e-13 49.8 0.0 4.1e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|121639664|ref|YP_979888.1| - 7.6e-05 22.6 0.1 0.00052 19.9 0.1 2.2 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|121639664|ref|YP_979888.1| - 0.0016 18.3 0.0 0.0036 17.2 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 gi|121639664|ref|YP_979888.1| - 0.0041 17.1 0.0 0.009 16.0 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn helix HTH_8 PF02954.19 gi|121639664|ref|YP_979888.1| - 0.0049 16.6 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_23 PF13384.6 gi|121639664|ref|YP_979888.1| - 0.0057 16.4 0.0 0.013 15.3 0.0 1.7 1 1 0 1 1 1 1 Homeodomain-like domain DUF134 PF02001.16 gi|121639664|ref|YP_979888.1| - 0.0078 16.7 0.0 0.012 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_31 PF13560.6 gi|121639664|ref|YP_979888.1| - 0.011 16.0 1.8 0.091 13.1 0.3 2.7 2 1 1 3 3 3 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|121639664|ref|YP_979888.1| - 0.066 13.3 0.0 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix AbiEi_4 PF13338.6 gi|121639664|ref|YP_979888.1| - 0.071 13.3 0.1 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin MerR PF00376.23 gi|121639664|ref|YP_979888.1| - 0.092 12.5 0.1 0.092 12.5 0.1 2.0 3 0 0 3 3 3 0 MerR family regulatory protein Phage_integrase PF00589.22 gi|121639665|ref|YP_979889.1| - 1.5e-10 41.1 0.1 1.7e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family DUF3435 PF11917.8 gi|121639665|ref|YP_979889.1| - 0.025 13.5 0.0 0.029 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) dCMP_cyt_deam_1 PF00383.23 gi|121639666|ref|YP_979890.1| - 2.7e-23 81.8 0.0 3.2e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|121639666|ref|YP_979890.1| - 9.6e-20 70.7 0.0 1e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|121639666|ref|YP_979890.1| - 0.0042 17.2 4.0 0.02 14.9 0.6 2.1 1 1 1 2 2 2 1 Bd3614-like deaminase MauJ PF17419.2 gi|121639667|ref|YP_979891.1| - 0.018 14.5 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Methylamine utilization protein MauJ PDH PF02153.17 gi|121639668|ref|YP_979892.1| - 2.3e-40 138.2 0.0 3.1e-40 137.8 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.17 gi|121639668|ref|YP_979892.1| - 0.07 13.7 0.1 0.27 11.8 0.0 2.1 2 1 1 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Glycolipid_bind PF06475.11 gi|121639669|ref|YP_979893.1| - 5.7e-56 188.8 0.0 6.4e-56 188.7 0.0 1.0 1 0 0 1 1 1 1 Putative glycolipid-binding BPD_transp_1 PF00528.22 gi|121639670|ref|YP_979894.1| - 6e-15 55.5 13.9 6e-15 55.5 13.9 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|121639671|ref|YP_979895.1| - 2.8e-17 63.1 18.9 3.5e-17 62.7 18.9 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|121639672|ref|YP_979896.1| - 3.2e-31 108.7 0.0 4.5e-31 108.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121639672|ref|YP_979896.1| - 4.5e-08 33.3 0.1 0.002 18.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|121639672|ref|YP_979896.1| - 0.0017 18.1 0.0 0.0023 17.7 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|121639672|ref|YP_979896.1| - 0.0038 17.0 0.1 0.0089 15.8 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|121639672|ref|YP_979896.1| - 0.0055 17.0 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|121639672|ref|YP_979896.1| - 0.0071 16.7 0.5 0.015 15.6 0.1 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|121639672|ref|YP_979896.1| - 0.0087 16.6 0.0 0.014 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|121639672|ref|YP_979896.1| - 0.0098 16.3 0.1 0.043 14.2 0.1 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|121639672|ref|YP_979896.1| - 0.011 15.7 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Rad17 PF03215.15 gi|121639672|ref|YP_979896.1| - 0.013 15.5 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ABC_ATPase PF09818.9 gi|121639672|ref|YP_979896.1| - 0.018 13.9 0.2 1.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Zeta_toxin PF06414.12 gi|121639672|ref|YP_979896.1| - 0.037 13.3 0.1 0.081 12.2 0.0 1.5 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 gi|121639672|ref|YP_979896.1| - 0.038 14.1 0.4 0.11 12.7 0.4 2.0 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|121639672|ref|YP_979896.1| - 0.051 13.8 0.2 0.34 11.1 0.1 2.4 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|121639672|ref|YP_979896.1| - 0.12 12.2 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain OpuAC PF04069.12 gi|121639673|ref|YP_979897.1| - 1.7e-51 175.3 0.0 1.9e-51 175.1 0.0 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system PvlArgDC PF01862.16 gi|121639673|ref|YP_979897.1| - 0.011 15.6 0.1 0.02 14.7 0.1 1.4 1 0 0 1 1 1 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AvrD PF05655.11 gi|121639673|ref|YP_979897.1| - 0.14 11.4 0.9 2.2 7.6 0.0 2.5 3 0 0 3 3 3 0 Pseudomonas avirulence D protein (AvrD) LapA_dom PF06305.11 gi|121639674|ref|YP_979898.1| - 3.4e-10 39.6 0.7 3.4e-10 39.6 0.7 2.0 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain DUF2207 PF09972.9 gi|121639674|ref|YP_979898.1| - 1.9 7.1 3.3 2.1 7.0 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4131 PF13567.6 gi|121639674|ref|YP_979898.1| - 2.5 7.7 8.8 3.1 7.4 8.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) APH PF01636.23 gi|121639675|ref|YP_979899.1| - 3.4e-41 141.7 4.9 5.2e-41 141.1 4.9 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Alkyl_sulf_dimr PF14863.6 gi|121639676|ref|YP_979900.1| - 5.8e-58 195.3 0.0 9.1e-58 194.6 0.0 1.3 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Lactamase_B PF00753.27 gi|121639676|ref|YP_979900.1| - 1.7e-43 148.9 4.9 4.1e-43 147.7 4.9 1.7 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Alkyl_sulf_C PF14864.6 gi|121639676|ref|YP_979900.1| - 1.1e-32 113.0 0.0 1.9e-32 112.2 0.0 1.4 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Lactamase_B_2 PF12706.7 gi|121639676|ref|YP_979900.1| - 2.6e-07 30.4 0.2 7.1e-07 28.9 0.2 1.9 1 1 0 1 1 1 1 Beta-lactamase superfamily domain TPR_16 PF13432.6 gi|121639676|ref|YP_979900.1| - 0.68 10.6 12.8 0.082 13.6 6.3 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Myco_19_kDa PF05481.12 gi|121639677|ref|YP_979901.1| - 8.2e-37 126.0 6.6 8.2e-37 126.0 6.6 1.4 1 1 0 1 1 1 1 Mycobacterium 19 kDa lipoprotein antigen PilX PF13681.6 gi|121639677|ref|YP_979901.1| - 0.046 14.1 0.8 0.67 10.4 0.2 2.2 2 0 0 2 2 2 0 Type IV pilus assembly protein PilX C-term HATPase_c PF02518.26 gi|121639678|ref|YP_979902.1| - 4.5e-23 81.9 0.0 7.2e-23 81.2 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|121639678|ref|YP_979902.1| - 1.4e-18 66.7 0.5 5.4e-18 64.8 0.5 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|121639678|ref|YP_979902.1| - 1.5e-08 34.8 2.4 2e-08 34.5 0.2 2.5 3 0 0 3 3 3 1 HAMP domain HATPase_c_2 PF13581.6 gi|121639678|ref|YP_979902.1| - 0.021 14.8 0.0 0.073 13.0 0.0 1.9 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|121639678|ref|YP_979902.1| - 0.038 13.9 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 GHKL domain Response_reg PF00072.24 gi|121639679|ref|YP_979903.1| - 2.7e-29 101.6 0.0 4.6e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|121639679|ref|YP_979903.1| - 6.8e-25 87.0 0.0 4.4e-24 84.4 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 gi|121639679|ref|YP_979903.1| - 0.00048 20.5 0.0 0.00083 19.7 0.0 1.4 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ 3HCDH_RFF PF18321.1 gi|121639679|ref|YP_979903.1| - 0.022 15.2 0.9 0.39 11.2 0.2 2.5 2 0 0 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain B12-binding PF02310.19 gi|121639679|ref|YP_979903.1| - 0.03 14.4 0.1 0.072 13.1 0.0 1.6 2 0 0 2 2 2 0 B12 binding domain LCM PF04072.14 gi|121639681|ref|YP_979905.1| - 5.3e-62 209.1 0.1 8e-62 208.5 0.1 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase SnoaL_2 PF12680.7 gi|121639682|ref|YP_979906.1| - 3.4e-12 46.9 0.8 4.3e-12 46.6 0.8 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|121639682|ref|YP_979906.1| - 3.6e-05 23.5 0.0 4.9e-05 23.1 0.0 1.3 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase DUF4440 PF14534.6 gi|121639682|ref|YP_979906.1| - 0.0006 20.2 0.1 0.0007 20.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) HCBP_related PF06594.11 gi|121639682|ref|YP_979906.1| - 0.0068 16.3 0.4 0.013 15.4 0.4 1.5 1 0 0 1 1 1 1 Haemolysin-type calcium binding protein related domain SnoaL_3 PF13474.6 gi|121639682|ref|YP_979906.1| - 0.02 15.2 0.0 0.023 15.0 0.0 1.3 1 1 0 1 1 1 0 SnoaL-like domain LEH PF07858.12 gi|121639682|ref|YP_979906.1| - 0.062 13.4 0.0 0.16 12.1 0.0 1.6 1 1 0 1 1 1 0 Limonene-1,2-epoxide hydrolase catalytic domain BAT PF15915.5 gi|121639683|ref|YP_979907.1| - 0.0074 16.2 1.2 0.013 15.4 0.6 1.6 1 1 0 1 1 1 1 GAF and HTH_10 associated domain DUF4164 PF13747.6 gi|121639683|ref|YP_979907.1| - 0.015 15.5 4.1 0.068 13.5 4.1 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) DUF1664 PF07889.12 gi|121639683|ref|YP_979907.1| - 0.018 15.1 0.1 0.093 12.8 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|121639683|ref|YP_979907.1| - 0.069 13.4 0.3 0.11 12.8 0.3 1.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ABC_tran_CTD PF16326.5 gi|121639683|ref|YP_979907.1| - 0.1 12.9 0.3 1.6 9.0 0.3 2.2 1 1 0 1 1 1 0 ABC transporter C-terminal domain XhlA PF10779.9 gi|121639683|ref|YP_979907.1| - 0.11 12.7 0.3 1.4 9.1 0.2 2.0 2 0 0 2 2 2 0 Haemolysin XhlA HTH_23 PF13384.6 gi|121639686|ref|YP_979910.1| - 0.00039 20.1 4.6 0.00087 19.0 0.4 2.1 1 1 1 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|121639686|ref|YP_979910.1| - 0.0086 16.2 2.9 0.059 13.5 2.6 2.3 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 gi|121639686|ref|YP_979910.1| - 0.024 14.8 0.4 0.034 14.3 0.4 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain U-box PF04564.15 gi|121639686|ref|YP_979910.1| - 0.17 12.0 0.2 0.76 10.0 0.2 1.8 1 1 0 1 1 1 0 U-box domain HTH_23 PF13384.6 gi|121639687|ref|YP_979911.1| - 0.0043 16.8 0.2 0.0072 16.1 0.2 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|121639687|ref|YP_979911.1| - 0.008 16.3 0.5 0.016 15.3 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Aminotran_1_2 PF00155.21 gi|121639688|ref|YP_979912.1| - 4.7e-48 164.2 0.0 5.6e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|121639688|ref|YP_979912.1| - 0.009 14.6 0.0 0.016 13.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|121639688|ref|YP_979912.1| - 0.051 12.9 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Alliinase_C PF04864.13 gi|121639688|ref|YP_979912.1| - 0.21 10.5 0.2 0.68 8.7 0.0 1.9 2 1 0 2 2 2 0 Allinase ECH_1 PF00378.20 gi|121639691|ref|YP_979915.1| - 2.2e-40 138.6 0.0 4e-40 137.7 0.0 1.4 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|121639691|ref|YP_979915.1| - 3e-19 69.7 0.1 4.7e-16 59.2 0.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Beta-lactamase PF00144.24 gi|121639692|ref|YP_979916.1| - 7.7e-69 232.4 0.3 1.1e-68 232.0 0.3 1.0 1 0 0 1 1 1 1 Beta-lactamase DUF222 PF02720.17 gi|121639693|ref|YP_979917.1| - 1.1e-56 192.5 20.0 1.9e-56 191.8 20.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF222) ADH_zinc_N PF00107.26 gi|121639694|ref|YP_979918.1| - 3.1e-26 91.9 0.5 4.8e-26 91.3 0.5 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121639694|ref|YP_979918.1| - 8.7e-21 75.4 0.7 1.7e-20 74.4 0.1 1.8 2 1 1 3 3 3 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|121639694|ref|YP_979918.1| - 1.7e-12 47.2 0.3 3.2e-10 39.9 0.1 2.4 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 gi|121639694|ref|YP_979918.1| - 0.00045 19.6 0.1 0.00086 18.7 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain YAcAr PF10686.9 gi|121639694|ref|YP_979918.1| - 0.014 15.3 0.0 0.05 13.6 0.0 2.0 2 0 0 2 2 2 0 YspA, cpYpsA-related SLOG family Aminotran_5 PF00266.19 gi|121639695|ref|YP_979919.1| - 2.1e-37 129.0 0.0 1.7e-36 126.0 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|121639695|ref|YP_979919.1| - 2.8e-06 26.1 0.0 4.2e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|121639695|ref|YP_979919.1| - 0.003 16.9 0.1 0.0052 16.1 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cuticle_2 PF08184.11 gi|121639696|ref|YP_979920.1| - 0.043 13.8 0.3 0.57 10.2 0.0 2.8 2 1 0 2 2 2 0 Cuticle protein 7 isoform family DUF2587 PF10759.9 gi|121639697|ref|YP_979921.1| - 2.9e-78 260.9 1.7 3.4e-78 260.7 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2587) ABC_tran PF00005.27 gi|121639698|ref|YP_979922.1| - 3e-18 66.7 0.0 1.4e-17 64.5 0.0 1.9 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|121639698|ref|YP_979922.1| - 0.00049 20.0 0.7 0.0016 18.3 0.1 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF3584 PF12128.8 gi|121639698|ref|YP_979922.1| - 0.0015 16.2 0.1 0.0021 15.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) MMR_HSR1 PF01926.23 gi|121639698|ref|YP_979922.1| - 0.0052 16.9 0.0 0.012 15.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 gi|121639698|ref|YP_979922.1| - 0.007 16.1 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|121639698|ref|YP_979922.1| - 0.019 15.5 0.0 0.037 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|121639698|ref|YP_979922.1| - 0.032 14.2 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|121639698|ref|YP_979922.1| - 0.038 14.4 0.1 0.053 13.9 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 gi|121639698|ref|YP_979922.1| - 0.05 13.3 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MeaB PF03308.16 gi|121639698|ref|YP_979922.1| - 0.07 12.1 0.4 0.28 10.1 0.1 2.1 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Glyco_tranf_2_3 PF13641.6 gi|121639699|ref|YP_979923.1| - 1.1e-09 38.5 0.0 2e-09 37.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|121639699|ref|YP_979923.1| - 3.9e-08 33.3 0.0 6.7e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 ABC2_membrane PF01061.24 gi|121639700|ref|YP_979924.1| - 1.7e-25 89.7 9.8 1.7e-25 89.7 9.8 1.9 2 0 0 2 2 2 2 ABC-2 type transporter GDP_Man_Dehyd PF16363.5 gi|121639701|ref|YP_979925.1| - 1.3e-59 202.3 0.0 8.1e-59 199.7 0.0 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|121639701|ref|YP_979925.1| - 6.7e-59 199.3 0.1 8.2e-59 199.0 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|121639701|ref|YP_979925.1| - 5e-25 88.1 0.0 6.2e-25 87.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|121639701|ref|YP_979925.1| - 2.3e-18 66.3 0.0 7.8e-17 61.3 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|121639701|ref|YP_979925.1| - 1.3e-16 60.6 0.0 1.8e-16 60.1 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|121639701|ref|YP_979925.1| - 1e-14 54.4 0.0 4.1e-11 42.6 0.0 2.0 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|121639701|ref|YP_979925.1| - 1.1e-13 51.5 0.0 1.5e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|121639701|ref|YP_979925.1| - 1.8e-05 24.4 0.2 3.4e-05 23.5 0.2 1.4 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|121639701|ref|YP_979925.1| - 2.9e-05 23.6 0.1 0.0029 17.1 0.0 2.6 2 1 0 2 2 2 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|121639701|ref|YP_979925.1| - 0.079 13.2 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|121639701|ref|YP_979925.1| - 0.14 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Peptidase_M23 PF01551.22 gi|121639703|ref|YP_979927.1| - 1.3e-15 57.4 0.0 1.9e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M23 Glyco_tranf_2_4 PF13704.6 gi|121639703|ref|YP_979927.1| - 1.5e-09 38.2 0.2 2.7e-09 37.4 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 gi|121639703|ref|YP_979927.1| - 6.2e-07 29.4 0.3 0.00016 21.5 0.1 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|121639703|ref|YP_979927.1| - 0.0021 18.0 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 LCM PF04072.14 gi|121639704|ref|YP_979928.1| - 1.4e-65 220.8 0.4 1.7e-65 220.5 0.4 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase GreA_GreB PF01272.19 gi|121639705|ref|YP_979929.1| - 1.5e-10 40.8 0.0 2.5e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term GreA_GreB_N PF03449.15 gi|121639705|ref|YP_979929.1| - 0.06 13.5 3.5 0.087 13.0 3.5 1.2 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal DivIC PF04977.15 gi|121639705|ref|YP_979929.1| - 0.076 12.8 1.0 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Septum formation initiator GtrA PF04138.14 gi|121639706|ref|YP_979930.1| - 1e-19 70.9 12.4 1.2e-19 70.7 12.4 1.1 1 0 0 1 1 1 1 GtrA-like protein FAD_binding_4 PF01565.23 gi|121639707|ref|YP_979931.1| - 1.4e-25 89.6 1.0 1.4e-25 89.6 1.0 1.5 2 0 0 2 2 2 1 FAD binding domain ALO PF04030.14 gi|121639707|ref|YP_979931.1| - 3.3e-07 30.4 0.0 5.5e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase adh_short PF00106.25 gi|121639708|ref|YP_979932.1| - 3.6e-28 98.4 0.0 4.2e-28 98.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|121639708|ref|YP_979932.1| - 8.1e-20 71.4 0.7 9.9e-20 71.1 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|121639708|ref|YP_979932.1| - 2.1e-05 24.5 0.3 3.8e-05 23.7 0.3 1.4 1 1 0 1 1 1 1 KR domain YjeF_N PF03853.15 gi|121639708|ref|YP_979932.1| - 0.027 14.3 0.2 5.1 6.9 0.0 2.2 1 1 0 2 2 2 0 YjeF-related protein N-terminus Phosphonate-bd PF12974.7 gi|121639708|ref|YP_979932.1| - 0.064 12.8 0.1 0.094 12.3 0.1 1.3 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein AftA_N PF12250.8 gi|121639709|ref|YP_979933.1| - 7.6e-169 562.0 44.8 9.5e-169 561.7 44.8 1.0 1 0 0 1 1 1 1 Arabinofuranosyltransferase N terminal AftA_C PF12249.8 gi|121639709|ref|YP_979933.1| - 2.5e-72 242.2 0.1 3.3e-72 241.8 0.1 1.2 1 0 0 1 1 1 1 Arabinofuranosyltransferase A C terminal Arabinose_trans PF04602.12 gi|121639710|ref|YP_979934.1| - 1.9e-204 679.7 39.5 2.9e-204 679.1 39.5 1.3 1 0 0 1 1 1 1 Mycobacterial cell wall arabinan synthesis protein Arabino_trans_C PF14896.6 gi|121639710|ref|YP_979934.1| - 1.5e-150 501.5 0.6 1.9e-150 501.2 0.6 1.1 1 0 0 1 1 1 1 EmbC C-terminal domain Arabino_trans_N PF17689.1 gi|121639710|ref|YP_979934.1| - 5e-49 166.5 0.2 8.7e-49 165.7 0.2 1.4 1 0 0 1 1 1 1 Arabinosyltransferase concanavalin like domain Arabinose_trans PF04602.12 gi|121639711|ref|YP_979935.1| - 5.9e-171 569.3 40.9 9.1e-171 568.7 40.9 1.3 1 0 0 1 1 1 1 Mycobacterial cell wall arabinan synthesis protein Arabino_trans_C PF14896.6 gi|121639711|ref|YP_979935.1| - 2.8e-149 497.3 0.1 3.7e-149 496.9 0.1 1.2 1 0 0 1 1 1 1 EmbC C-terminal domain Arabino_trans_N PF17689.1 gi|121639711|ref|YP_979935.1| - 8.9e-49 165.7 0.0 1.5e-48 164.9 0.0 1.4 1 0 0 1 1 1 1 Arabinosyltransferase concanavalin like domain Arabinose_trans PF04602.12 gi|121639712|ref|YP_979936.1| - 1.2e-194 647.5 36.9 1.6e-194 647.0 36.9 1.2 1 0 0 1 1 1 1 Mycobacterial cell wall arabinan synthesis protein Arabino_trans_C PF14896.6 gi|121639712|ref|YP_979936.1| - 6.6e-137 456.6 0.4 1.1e-136 455.9 0.4 1.4 1 0 0 1 1 1 1 EmbC C-terminal domain Arabino_trans_N PF17689.1 gi|121639712|ref|YP_979936.1| - 4e-56 189.5 1.6 6.5e-56 188.9 1.6 1.3 1 0 0 1 1 1 1 Arabinosyltransferase concanavalin like domain YfhO PF09586.10 gi|121639712|ref|YP_979936.1| - 1.5 7.0 6.1 2.3 6.3 6.1 1.2 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Lactamase_B_2 PF12706.7 gi|121639713|ref|YP_979937.1| - 9.8e-13 48.1 0.0 1e-07 31.7 0.0 2.2 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|121639713|ref|YP_979937.1| - 1.4e-05 25.2 0.2 4.2e-05 23.7 0.0 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Acyl-CoA_dh_1 PF00441.24 gi|121639714|ref|YP_979938.1| - 5.1e-42 143.6 2.9 3e-41 141.1 0.2 2.5 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|121639714|ref|YP_979938.1| - 6.2e-16 58.4 0.0 1.2e-15 57.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|121639714|ref|YP_979938.1| - 9e-14 51.9 2.7 1.3e-13 51.3 0.0 2.5 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain AidB_N PF18158.1 gi|121639714|ref|YP_979938.1| - 2.2e-13 50.4 0.0 3.9e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain MerR-DNA-bind PF09278.11 gi|121639714|ref|YP_979938.1| - 0.25 11.9 4.1 0.24 11.9 2.0 2.1 2 0 0 2 2 2 0 MerR, DNA binding DDE_Tnp_ISL3 PF01610.17 gi|121639715|ref|YP_979939.1| - 4.1e-71 239.5 0.0 5.1e-71 239.2 0.0 1.1 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|121639715|ref|YP_979939.1| - 5.5e-12 44.9 3.3 5.5e-12 44.9 3.3 2.8 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 zf-ISL3 PF14690.6 gi|121639715|ref|YP_979939.1| - 2.3e-09 37.8 0.4 5.6e-09 36.5 0.4 1.7 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Carboxyl_trans PF01039.22 gi|121639716|ref|YP_979940.1| - 4.4e-138 461.0 0.0 5e-138 460.8 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain ketoacyl-synt PF00109.26 gi|121639717|ref|YP_979941.1| - 1.4e-84 283.6 0.2 3.3e-83 279.1 0.1 2.9 3 0 0 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Acyl_transf_1 PF00698.21 gi|121639717|ref|YP_979941.1| - 7.2e-53 180.1 0.0 1.3e-52 179.3 0.0 1.4 1 0 0 1 1 1 1 Acyl transferase domain Ketoacyl-synt_C PF02801.22 gi|121639717|ref|YP_979941.1| - 1.4e-44 150.8 0.1 3.1e-44 149.8 0.1 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain PP-binding PF00550.25 gi|121639717|ref|YP_979941.1| - 6e-21 74.6 0.2 1.2e-09 38.3 0.0 4.1 3 0 0 3 3 3 3 Phosphopantetheine attachment site Thioesterase PF00975.20 gi|121639717|ref|YP_979941.1| - 9.7e-18 65.1 0.4 3.1e-17 63.5 0.0 2.1 3 0 0 3 3 3 1 Thioesterase domain KAsynt_C_assoc PF16197.5 gi|121639717|ref|YP_979941.1| - 3.3e-11 43.6 0.0 9.8e-11 42.1 0.0 1.8 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Thiolase_N PF00108.23 gi|121639717|ref|YP_979941.1| - 6.3e-08 32.3 0.2 2.1e-07 30.6 0.1 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain Abhydrolase_6 PF12697.7 gi|121639717|ref|YP_979941.1| - 0.014 16.1 0.1 0.014 16.1 0.1 4.7 3 1 1 4 4 4 0 Alpha/beta hydrolase family Adaptin_binding PF10199.9 gi|121639717|ref|YP_979941.1| - 0.085 13.5 0.0 0.19 12.3 0.0 1.6 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Lipase_3 PF01764.25 gi|121639717|ref|YP_979941.1| - 0.14 12.0 0.0 0.81 9.5 0.0 2.1 2 0 0 2 2 2 0 Lipase (class 3) AMP-binding PF00501.28 gi|121639718|ref|YP_979942.1| - 7.2e-64 215.9 0.0 8.7e-64 215.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Cutinase PF01083.22 gi|121639719|ref|YP_979943.1| - 3.5e-16 59.7 0.6 8.5e-16 58.4 0.6 1.7 1 1 0 1 1 1 1 Cutinase PE-PPE PF08237.11 gi|121639719|ref|YP_979943.1| - 1.6e-09 37.7 0.1 2.5e-09 37.1 0.1 1.3 1 0 0 1 1 1 1 PE-PPE domain FSH1 PF03959.13 gi|121639719|ref|YP_979943.1| - 0.01 15.5 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) IncFII_repA PF02387.15 gi|121639719|ref|YP_979943.1| - 0.2 10.9 0.0 0.3 10.3 0.0 1.2 1 0 0 1 1 1 0 IncFII RepA protein family CwsA PF10814.8 gi|121639719|ref|YP_979943.1| - 0.3 11.3 2.0 0.62 10.2 2.0 1.5 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA Esterase PF00756.20 gi|121639720|ref|YP_979944.1| - 1.1e-49 169.4 3.4 1.3e-49 169.1 3.4 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 gi|121639720|ref|YP_979944.1| - 0.059 12.8 3.4 0.094 12.2 3.4 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Esterase PF00756.20 gi|121639721|ref|YP_979945.1| - 5.8e-78 262.0 0.3 6.7e-78 261.8 0.3 1.0 1 0 0 1 1 1 1 Putative esterase Glyco_transf_22 PF03901.17 gi|121639722|ref|YP_979946.1| - 0.15 11.2 1.1 0.29 10.3 1.1 1.4 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family UbiA PF01040.18 gi|121639723|ref|YP_979947.1| - 2.2e-19 69.8 18.7 2.2e-19 69.8 18.7 1.4 1 1 0 1 1 1 1 UbiA prenyltransferase family Cornichon PF03311.14 gi|121639723|ref|YP_979947.1| - 0.023 15.0 0.4 0.071 13.4 0.4 1.8 1 0 0 1 1 1 0 Cornichon protein PAP2 PF01569.21 gi|121639724|ref|YP_979948.1| - 1.6e-14 53.8 6.5 2e-14 53.5 4.2 2.1 1 1 1 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|121639724|ref|YP_979948.1| - 8.5e-08 32.1 7.5 1.7e-07 31.1 7.5 1.5 1 1 0 1 1 1 1 PAP2 superfamily CwsA PF10814.8 gi|121639724|ref|YP_979948.1| - 0.045 13.9 2.0 0.046 13.9 0.1 1.9 2 0 0 2 2 2 0 Cell wall synthesis protein CwsA DUF212 PF02681.14 gi|121639724|ref|YP_979948.1| - 0.068 13.3 0.8 1.3 9.2 0.1 2.2 1 1 1 2 2 2 0 Divergent PAP2 family DUF4175 PF13779.6 gi|121639724|ref|YP_979948.1| - 0.38 8.6 0.9 0.46 8.3 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Glft2_N PF17994.1 gi|121639725|ref|YP_979949.1| - 5.3e-63 211.1 0.1 9.1e-63 210.4 0.1 1.4 1 0 0 1 1 1 1 Galactofuranosyltransferase 2 N-terminal Glyco_tranf_2_3 PF13641.6 gi|121639725|ref|YP_979949.1| - 4.3e-50 170.7 0.0 7e-50 170.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|121639725|ref|YP_979949.1| - 0.0045 16.8 0.0 0.018 14.8 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 2 PglD_N PF17836.1 gi|121639725|ref|YP_979949.1| - 0.13 13.0 0.0 0.29 11.8 0.0 1.5 1 0 0 1 1 1 0 PglD N-terminal domain Glyco_trans_2_3 PF13632.6 gi|121639725|ref|YP_979949.1| - 0.5 10.3 5.0 2.4 8.0 0.1 2.8 4 0 0 4 4 4 0 Glycosyl transferase family group 2 GLF PF03275.13 gi|121639726|ref|YP_979950.1| - 9.5e-80 267.1 0.1 1.3e-79 266.6 0.1 1.2 1 0 0 1 1 1 1 UDP-galactopyranose mutase NAD_binding_8 PF13450.6 gi|121639726|ref|YP_979950.1| - 1.8e-18 66.6 0.0 3.8e-18 65.5 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|121639726|ref|YP_979950.1| - 7.1e-06 25.6 0.0 1.2e-05 24.9 0.0 1.5 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|121639726|ref|YP_979950.1| - 0.0005 19.5 0.0 0.0011 18.4 0.0 1.5 1 1 1 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|121639726|ref|YP_979950.1| - 0.00076 19.5 0.0 0.0017 18.4 0.0 1.6 1 0 0 1 1 1 1 FAD-NAD(P)-binding DAO PF01266.24 gi|121639726|ref|YP_979950.1| - 0.0013 18.4 0.1 0.003 17.2 0.1 1.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121639726|ref|YP_979950.1| - 0.0015 17.8 0.0 0.0024 17.2 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|121639726|ref|YP_979950.1| - 0.0024 18.4 0.0 0.028 15.0 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|121639726|ref|YP_979950.1| - 0.016 14.4 0.0 0.03 13.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GMC_oxred_N PF00732.19 gi|121639726|ref|YP_979950.1| - 0.095 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase GLTT PF01744.20 gi|121639727|ref|YP_979951.1| - 2.8e-07 30.1 20.2 7.2e-06 25.6 7.7 3.5 3 1 1 4 4 4 2 GLTT repeat (6 copies) LGFP PF08310.11 gi|121639728|ref|YP_979952.1| - 3e-19 69.3 8.9 9.9e-16 58.0 0.9 4.9 4 1 0 4 4 4 3 LGFP repeat Amidase_2 PF01510.25 gi|121639728|ref|YP_979952.1| - 3.5e-15 56.6 0.0 6.5e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase PE PF00934.20 gi|121639729|ref|YP_979953.1| - 2e-32 111.3 11.3 2e-32 111.3 11.3 4.1 5 0 0 5 5 5 1 PE family T7SS_ESX_EspC PF10824.8 gi|121639729|ref|YP_979953.1| - 1.6 9.2 15.0 0.051 14.0 6.4 3.0 2 1 1 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm Hydrolase_3 PF08282.12 gi|121639730|ref|YP_979954.1| - 1.7e-56 191.8 0.0 2e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|121639730|ref|YP_979954.1| - 4.8e-11 42.7 0.0 2.8e-06 27.0 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 gi|121639730|ref|YP_979954.1| - 8.4e-09 36.1 3.5 0.0046 17.4 0.0 3.2 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|121639730|ref|YP_979954.1| - 1e-07 32.5 4.2 0.00011 22.6 0.1 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|121639730|ref|YP_979954.1| - 0.07 13.2 0.0 0.25 11.5 0.0 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|121639730|ref|YP_979954.1| - 0.13 12.3 0.1 5.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Acyltransferase PF01553.21 gi|121639731|ref|YP_979955.1| - 2.7e-30 104.7 0.0 3.6e-30 104.3 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase Lip_A_acyltrans PF03279.13 gi|121639731|ref|YP_979955.1| - 0.092 11.9 0.1 0.19 10.8 0.1 1.5 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase Acyltransferase PF01553.21 gi|121639732|ref|YP_979956.1| - 1e-32 112.6 0.0 1.4e-32 112.1 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase Lip_A_acyltrans PF03279.13 gi|121639732|ref|YP_979956.1| - 0.0076 15.5 0.0 0.012 14.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Acyltransferase PF01553.21 gi|121639733|ref|YP_979957.1| - 4.1e-34 117.1 0.0 5.4e-34 116.7 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase Lip_A_acyltrans PF03279.13 gi|121639733|ref|YP_979957.1| - 0.00018 20.8 0.0 0.00024 20.4 0.0 1.1 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase THDPS_M PF14789.6 gi|121639733|ref|YP_979957.1| - 0.14 12.3 0.3 1 9.5 0.0 2.4 2 0 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase middle APH PF01636.23 gi|121639734|ref|YP_979958.1| - 2.3e-15 57.2 9.6 5.2e-10 39.7 2.7 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Choline_kinase PF01633.20 gi|121639734|ref|YP_979958.1| - 0.13 11.8 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase Rieske PF00355.26 gi|121639735|ref|YP_979959.1| - 1.5e-07 31.3 0.1 3e-07 30.3 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Lactamase_B_3 PF13483.6 gi|121639735|ref|YP_979959.1| - 7.1e-07 29.3 0.0 1.1e-06 28.6 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|121639735|ref|YP_979959.1| - 0.0031 17.1 0.1 0.0058 16.2 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Condensation PF00668.20 gi|121639737|ref|YP_979961.1| - 9.5e-15 54.2 0.0 1.4e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Condensation domain SfLAP PF11139.8 gi|121639738|ref|YP_979962.1| - 2.9e-59 200.1 22.1 3.2e-59 199.9 22.1 1.0 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein PE-PPE PF08237.11 gi|121639740|ref|YP_979964.1| - 1e-62 211.7 1.1 1e-62 211.7 1.1 1.3 2 0 0 2 2 2 1 PE-PPE domain MMPL PF03176.15 gi|121639741|ref|YP_979965.1| - 1.7e-207 687.9 39.9 9.5e-106 353.5 15.1 2.5 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.8 gi|121639741|ref|YP_979965.1| - 9.6e-06 25.5 2.6 9.6e-06 25.5 2.6 2.4 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation PhageMin_Tail PF10145.9 gi|121639741|ref|YP_979965.1| - 0.0049 16.7 5.1 0.0049 16.7 5.1 2.8 3 0 0 3 3 3 1 Phage-related minor tail protein Patched PF02460.18 gi|121639741|ref|YP_979965.1| - 0.054 11.6 1.7 11 4.0 0.0 2.5 2 0 0 2 2 2 0 Patched family Condensation PF00668.20 gi|121639742|ref|YP_979966.1| - 9.7e-15 54.2 0.0 1.4e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Condensation domain Acyl_transf_1 PF00698.21 gi|121639743|ref|YP_979967.1| - 6.7e-97 324.8 2.2 1.5e-96 323.7 2.2 1.6 1 0 0 1 1 1 1 Acyl transferase domain ketoacyl-synt PF00109.26 gi|121639743|ref|YP_979967.1| - 1.5e-93 313.0 0.2 1.5e-93 313.0 0.2 2.4 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KR PF08659.10 gi|121639743|ref|YP_979967.1| - 3.9e-59 199.6 0.6 3.9e-59 199.6 0.6 2.6 4 0 0 4 4 2 1 KR domain PS-DH PF14765.6 gi|121639743|ref|YP_979967.1| - 1.3e-49 169.1 5.7 2.5e-49 168.1 5.7 1.5 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ketoacyl-synt_C PF02801.22 gi|121639743|ref|YP_979967.1| - 1.1e-34 119.0 3.7 1.1e-34 118.9 1.1 2.6 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain ADH_zinc_N PF00107.26 gi|121639743|ref|YP_979967.1| - 1.6e-22 79.8 0.4 5.6e-22 78.1 0.0 2.2 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|121639743|ref|YP_979967.1| - 3e-19 70.4 0.1 6.6e-18 66.1 0.0 3.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase KAsynt_C_assoc PF16197.5 gi|121639743|ref|YP_979967.1| - 4.4e-15 56.1 0.0 9.5e-15 55.0 0.0 1.5 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension PP-binding PF00550.25 gi|121639743|ref|YP_979967.1| - 1.5e-09 38.1 0.1 9.9e-09 35.4 0.0 2.4 2 0 0 2 2 2 1 Phosphopantetheine attachment site adh_short PF00106.25 gi|121639743|ref|YP_979967.1| - 1.9e-09 37.3 0.6 1.6e-08 34.2 0.0 2.8 3 0 0 3 3 3 1 short chain dehydrogenase Thiolase_N PF00108.23 gi|121639743|ref|YP_979967.1| - 4.5e-07 29.5 0.3 4.5e-07 29.5 0.3 2.2 2 0 0 2 2 2 1 Thiolase, N-terminal domain ADH_N PF08240.12 gi|121639743|ref|YP_979967.1| - 6.1e-06 26.1 0.7 1.8e-05 24.6 0.1 2.2 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain 2-Hacid_dh_C PF02826.19 gi|121639743|ref|YP_979967.1| - 0.042 13.2 0.4 0.89 8.9 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMP-binding PF00501.28 gi|121639744|ref|YP_979968.1| - 8.7e-73 245.3 0.0 1.1e-72 245.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme OrfB_IS605 PF01385.19 gi|121639745|ref|YP_979969.1| - 2.8e-31 108.2 0.6 5.6e-31 107.2 0.6 1.5 1 0 0 1 1 1 1 Probable transposase HTH_OrfB_IS605 PF12323.8 gi|121639745|ref|YP_979969.1| - 1.5e-10 40.4 0.1 4.2e-10 38.9 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Resolvase PF00239.21 gi|121639746|ref|YP_979970.1| - 1e-09 38.7 0.1 1.4e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain NAD_binding_8 PF13450.6 gi|121639747|ref|YP_979971.1| - 1.9e-10 40.8 0.4 5.8e-10 39.3 0.4 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|121639747|ref|YP_979971.1| - 2.4e-09 37.0 1.0 3.3e-08 33.2 1.0 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|121639747|ref|YP_979971.1| - 8.4e-05 22.3 9.9 0.016 14.8 1.0 3.0 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121639747|ref|YP_979971.1| - 8.7e-05 21.8 3.4 0.00015 21.0 1.7 1.9 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 gi|121639747|ref|YP_979971.1| - 0.00025 20.4 1.0 0.0034 16.7 0.3 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 gi|121639747|ref|YP_979971.1| - 0.00044 19.7 1.9 0.00066 19.1 0.8 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121639747|ref|YP_979971.1| - 0.0022 17.3 0.2 0.0039 16.5 0.2 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|121639747|ref|YP_979971.1| - 0.0037 16.4 3.3 0.0079 15.3 0.9 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.14 gi|121639747|ref|YP_979971.1| - 0.0057 15.9 0.3 0.05 12.8 0.2 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|121639747|ref|YP_979971.1| - 0.04 12.6 0.6 0.073 11.8 0.2 1.5 2 0 0 2 2 2 0 HI0933-like protein GDI PF00996.18 gi|121639747|ref|YP_979971.1| - 0.071 11.6 0.0 0.43 9.0 0.0 1.9 2 0 0 2 2 2 0 GDP dissociation inhibitor TetR_N PF00440.23 gi|121639748|ref|YP_979972.1| - 3.3e-12 46.0 0.5 6.6e-12 45.0 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_AraC PF00165.23 gi|121639748|ref|YP_979972.1| - 0.0076 16.3 0.1 0.023 14.8 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 gi|121639748|ref|YP_979972.1| - 0.015 15.1 0.2 0.043 13.6 0.2 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_7 PF02796.15 gi|121639748|ref|YP_979972.1| - 0.018 15.1 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_20 PF12840.7 gi|121639748|ref|YP_979972.1| - 0.035 14.2 0.3 0.4 10.8 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|121639748|ref|YP_979972.1| - 0.038 13.9 0.0 0.074 13.0 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_18 PF12833.7 gi|121639748|ref|YP_979972.1| - 0.044 14.0 0.5 0.18 12.1 0.1 2.0 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|121639748|ref|YP_979972.1| - 0.1 12.7 0.3 0.41 10.8 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|121639748|ref|YP_979972.1| - 0.18 12.0 0.0 0.39 10.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase DUF2834 PF11196.8 gi|121639749|ref|YP_979973.1| - 9.2e-30 102.9 3.6 1.4e-29 102.3 3.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2834) Colicin_V PF02674.16 gi|121639749|ref|YP_979973.1| - 0.0062 16.5 1.2 0.21 11.6 0.0 2.2 2 0 0 2 2 2 2 Colicin V production protein Methyltransf_11 PF08241.12 gi|121639750|ref|YP_979974.1| - 2.1e-17 63.5 0.0 3.3e-17 62.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|121639750|ref|YP_979974.1| - 1.1e-15 58.1 0.0 1.7e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|121639750|ref|YP_979974.1| - 3.1e-10 40.7 0.0 4.6e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|121639750|ref|YP_979974.1| - 4e-07 30.0 0.0 4.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|121639750|ref|YP_979974.1| - 4e-07 29.4 0.0 4.9e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 gi|121639750|ref|YP_979974.1| - 0.00046 19.9 0.0 0.00055 19.6 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.20 gi|121639750|ref|YP_979974.1| - 0.0025 17.2 0.0 0.004 16.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|121639750|ref|YP_979974.1| - 0.0054 16.5 0.0 0.0072 16.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain HTH_18 PF12833.7 gi|121639751|ref|YP_979975.1| - 2.2e-21 75.9 0.1 2.2e-21 75.9 0.1 3.3 2 1 2 4 4 4 1 Helix-turn-helix domain HTH_AraC PF00165.23 gi|121639751|ref|YP_979975.1| - 8e-15 54.5 0.0 1.5e-08 34.5 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 gi|121639751|ref|YP_979975.1| - 1.8e-07 30.8 1.3 3e-07 30.1 1.3 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|121639751|ref|YP_979975.1| - 6.7e-05 22.8 0.8 6.7e-05 22.8 0.8 1.7 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_31 PF13560.6 gi|121639751|ref|YP_979975.1| - 0.0046 17.3 0.5 0.0046 17.3 0.5 2.6 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|121639751|ref|YP_979975.1| - 0.009 15.8 0.1 0.83 9.5 0.0 2.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|121639751|ref|YP_979975.1| - 0.015 15.2 0.1 0.037 14.0 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|121639751|ref|YP_979975.1| - 0.045 13.3 0.0 0.088 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.22 gi|121639751|ref|YP_979975.1| - 0.099 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix TetR_N PF00440.23 gi|121639751|ref|YP_979975.1| - 0.17 11.7 0.0 0.35 10.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family FmiP_Thoc5 PF09766.9 gi|121639751|ref|YP_979975.1| - 0.24 10.6 0.0 2.3 7.4 0.0 1.9 2 0 0 2 2 2 0 Fms-interacting protein/Thoc5 Seryl_tRNA_N PF02403.22 gi|121639752|ref|YP_979976.1| - 1.4e-25 89.6 0.3 1.9e-25 89.2 0.3 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain tRNA-synt_2b PF00587.25 gi|121639752|ref|YP_979976.1| - 1.3e-24 87.1 0.0 1.9e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Septum_form PF13845.6 gi|121639753|ref|YP_979977.1| - 2e-77 259.7 0.0 2.8e-77 259.3 0.0 1.2 1 0 0 1 1 1 1 Septum formation Zincin_1 PF06262.11 gi|121639754|ref|YP_979978.1| - 2.8e-30 104.3 0.4 3.7e-30 103.9 0.4 1.1 1 0 0 1 1 1 1 Zincin-like metallopeptidase His_Phos_1 PF00300.22 gi|121639755|ref|YP_979979.1| - 9.8e-36 123.3 0.2 1.1e-35 123.1 0.2 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PALB2_WD40 PF16756.5 gi|121639755|ref|YP_979979.1| - 0.16 10.8 0.1 0.22 10.4 0.1 1.2 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain PDT PF00800.18 gi|121639756|ref|YP_979980.1| - 5e-43 147.0 0.0 6.7e-43 146.6 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|121639756|ref|YP_979980.1| - 7.2e-11 41.7 0.1 1.5e-10 40.7 0.1 1.6 1 0 0 1 1 1 1 ACT domain SBP_bac_3 PF00497.20 gi|121639756|ref|YP_979980.1| - 0.023 14.1 0.3 0.22 10.9 0.2 2.2 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 DUF2470 PF10615.9 gi|121639757|ref|YP_979981.1| - 0.00015 22.4 0.0 0.00033 21.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) LytR_cpsA_psr PF03816.14 gi|121639758|ref|YP_979982.1| - 1.2e-22 80.7 0.0 1.1e-20 74.4 0.0 2.0 1 1 0 1 1 1 1 Cell envelope-related transcriptional attenuator domain Ferritin PF00210.24 gi|121639759|ref|YP_979983.1| - 5.1e-33 114.0 2.9 6.2e-33 113.7 2.9 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|121639759|ref|YP_979983.1| - 2.7e-05 24.6 0.0 3.5e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Rubrerythrin kleA_kleC PF17383.2 gi|121639759|ref|YP_979983.1| - 0.093 13.1 0.2 0.24 11.8 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized KorC regulated protein A GDPD PF03009.17 gi|121639760|ref|YP_979984.1| - 1.2e-51 175.9 0.0 1.4e-51 175.8 0.0 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family AXH PF08517.12 gi|121639760|ref|YP_979984.1| - 0.06 13.9 0.0 0.11 13.1 0.0 1.4 1 0 0 1 1 1 0 Ataxin-1 and HBP1 module (AXH) DUF4328 PF14219.6 gi|121639761|ref|YP_979985.1| - 3.6e-29 101.5 24.1 3.6e-29 101.5 24.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4328) DUF1180 PF06679.12 gi|121639761|ref|YP_979985.1| - 0.021 15.2 0.4 0.057 13.8 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) HypA PF01155.19 gi|121639761|ref|YP_979985.1| - 0.051 13.6 0.3 0.086 12.9 0.3 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|121639761|ref|YP_979985.1| - 0.18 11.8 0.4 0.32 11.0 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|121639761|ref|YP_979985.1| - 0.37 10.7 1.8 1.4 8.9 1.8 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|121639761|ref|YP_979985.1| - 1.5 8.8 6.0 5.1 7.1 6.0 1.8 1 1 0 1 1 1 0 Nudix N-terminal UPF0547 PF10571.9 gi|121639761|ref|YP_979985.1| - 6.4 7.0 7.5 1.5 9.0 0.1 3.2 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 DUF5447 PF17525.2 gi|121639761|ref|YP_979985.1| - 7.2 7.1 0.0 7.2 7.1 0.0 3.4 3 1 1 4 4 4 0 Family of unknown function (DUF5447) DEDD_Tnp_IS110 PF01548.17 gi|121639762|ref|YP_979986.1| - 6.8e-14 52.0 0.0 8.2e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Transposase TetR_C_11 PF16859.5 gi|121639763|ref|YP_979987.1| - 0.066 13.5 2.6 0.11 12.8 2.6 1.6 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Sod_Fe_C PF02777.18 gi|121639764|ref|YP_979988.1| - 5.8e-34 116.3 0.2 9.6e-34 115.6 0.2 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|121639764|ref|YP_979988.1| - 1.3e-30 105.7 3.6 1.3e-30 105.7 3.6 1.5 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain UPF0016 PF01169.19 gi|121639766|ref|YP_979990.1| - 5.2e-36 122.8 26.7 7.2e-20 71.1 4.3 3.0 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 PaRep2a PF07903.11 gi|121639766|ref|YP_979990.1| - 0.065 13.1 0.0 15 5.4 0.0 2.2 2 0 0 2 2 2 0 PaRep2a protein HTH_3 PF01381.22 gi|121639767|ref|YP_979991.1| - 0.00022 21.2 0.0 0.00043 20.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|121639767|ref|YP_979991.1| - 0.00048 20.4 0.2 0.022 15.1 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain ActA PF05058.12 gi|121639767|ref|YP_979991.1| - 0.19 10.0 0.0 0.23 9.8 0.0 1.1 1 0 0 1 1 1 0 ActA Protein RHH_1 PF01402.21 gi|121639767|ref|YP_979991.1| - 0.28 11.2 2.9 1.8 8.6 0.3 2.6 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family DUF3239 PF11580.8 gi|121639769|ref|YP_979993.1| - 0.043 14.1 0.5 0.058 13.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) DotU PF09850.9 gi|121639769|ref|YP_979993.1| - 0.86 9.3 3.0 1.5 8.5 3.0 1.4 1 1 0 1 1 1 0 Type VI secretion system protein DotU HC2 PF07382.11 gi|121639770|ref|YP_979994.1| - 0.0034 17.5 21.7 0.0051 16.9 21.7 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 DUF1180 PF06679.12 gi|121639770|ref|YP_979994.1| - 0.0073 16.7 7.5 0.0093 16.4 7.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1180) MHYT PF03707.16 gi|121639770|ref|YP_979994.1| - 0.19 11.9 0.2 0.28 11.4 0.2 1.3 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat RraA-like PF03737.15 gi|121639771|ref|YP_979995.1| - 1.6e-41 142.0 1.1 1.8e-41 141.8 1.1 1.0 1 0 0 1 1 1 1 Aldolase/RraA FMO-like PF00743.19 gi|121639772|ref|YP_979996.1| - 4.6e-13 48.4 0.0 8.6e-12 44.2 0.0 2.2 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 gi|121639772|ref|YP_979996.1| - 2.2e-10 40.6 0.0 1e-07 32.1 0.0 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|121639772|ref|YP_979996.1| - 9.4e-09 34.9 0.0 8.1e-07 28.5 0.0 2.6 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121639772|ref|YP_979996.1| - 1.2e-08 34.6 0.0 3.7e-08 33.0 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121639772|ref|YP_979996.1| - 2.3e-08 34.0 4.9 2e-06 27.7 0.1 3.6 2 2 1 4 4 4 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|121639772|ref|YP_979996.1| - 7.6e-07 28.6 0.0 2e-05 23.9 0.0 2.3 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 gi|121639772|ref|YP_979996.1| - 1.2e-06 28.0 0.0 0.0016 17.7 0.0 2.5 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Shikimate_DH PF01488.20 gi|121639772|ref|YP_979996.1| - 6e-05 23.1 0.0 0.0075 16.3 0.0 2.8 3 0 0 3 3 3 1 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 gi|121639772|ref|YP_979996.1| - 0.00011 22.2 0.6 0.2 11.7 0.0 3.5 3 1 0 3 3 3 2 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|121639772|ref|YP_979996.1| - 0.00014 22.3 0.1 0.066 13.8 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|121639772|ref|YP_979996.1| - 0.00056 19.1 0.5 0.22 10.6 0.0 2.5 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|121639772|ref|YP_979996.1| - 0.00084 18.5 0.1 0.0047 16.1 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|121639772|ref|YP_979996.1| - 0.05 12.6 0.2 3 6.8 0.0 2.8 3 0 0 3 3 3 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|121639772|ref|YP_979996.1| - 0.056 12.3 0.0 5.5 5.7 0.0 2.3 2 0 0 2 2 2 0 Tryptophan halogenase FAD_oxidored PF12831.7 gi|121639772|ref|YP_979996.1| - 0.078 12.3 0.0 0.22 10.8 0.0 1.7 2 0 0 2 2 2 0 FAD dependent oxidoreductase Mqo PF06039.15 gi|121639772|ref|YP_979996.1| - 0.091 11.3 0.0 1.1 7.8 0.0 2.2 2 0 0 2 2 2 0 Malate:quinone oxidoreductase (Mqo) MCRA PF06100.11 gi|121639772|ref|YP_979996.1| - 0.097 11.4 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 MCRA family NAD_binding_7 PF13241.6 gi|121639772|ref|YP_979996.1| - 0.15 12.5 0.0 0.47 10.9 0.0 1.8 2 0 0 2 2 1 0 Putative NAD(P)-binding TetR_N PF00440.23 gi|121639773|ref|YP_979997.1| - 1.5e-13 50.3 0.1 4.8e-13 48.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_10 PF04967.12 gi|121639773|ref|YP_979997.1| - 0.029 14.2 0.0 0.37 10.6 0.0 2.5 3 0 0 3 3 3 0 HTH DNA binding domain TetR_C_36 PF18598.1 gi|121639773|ref|YP_979997.1| - 0.09 12.7 0.1 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HHH_8 PF14716.6 gi|121639774|ref|YP_979998.1| - 1.4e-13 51.0 0.0 2.8e-13 50.0 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain PHP PF02811.19 gi|121639774|ref|YP_979998.1| - 2.5e-10 40.9 0.0 4.6e-10 40.0 0.0 1.5 1 1 0 1 1 1 1 PHP domain HHH PF00633.23 gi|121639774|ref|YP_979998.1| - 0.0049 16.7 0.0 0.014 15.3 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif RNase_P_p30 PF01876.16 gi|121639774|ref|YP_979998.1| - 0.037 13.5 0.0 0.15 11.5 0.0 2.0 2 1 0 2 2 2 0 RNase P subunit p30 CMD PF02627.20 gi|121639774|ref|YP_979998.1| - 0.043 13.9 0.2 0.64 10.1 0.0 2.8 2 0 0 2 2 2 0 Carboxymuconolactone decarboxylase family HEPN_SAV_6107 PF18726.1 gi|121639774|ref|YP_979998.1| - 0.18 12.3 1.3 0.86 10.2 0.7 2.4 2 0 0 2 2 2 0 SAV_6107-like HEPN Pyr_redox_2 PF07992.14 gi|121639776|ref|YP_980000.1| - 4.1e-26 91.9 0.4 2e-25 89.6 0.4 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 gi|121639776|ref|YP_980000.1| - 3.4e-24 84.8 0.0 4.8e-24 84.3 0.0 1.2 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NAD_binding_8 PF13450.6 gi|121639776|ref|YP_980000.1| - 1.2e-10 41.5 0.1 5.6e-10 39.3 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|121639776|ref|YP_980000.1| - 4.3e-10 40.0 1.3 2.2e-05 24.9 0.1 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|121639776|ref|YP_980000.1| - 1.3e-09 37.9 1.7 8.2e-09 35.3 0.2 2.6 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 gi|121639776|ref|YP_980000.1| - 4.7e-08 32.6 0.0 0.0047 16.2 0.0 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121639776|ref|YP_980000.1| - 6.1e-08 32.6 3.4 2e-05 24.4 0.3 2.6 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|121639776|ref|YP_980000.1| - 2.4e-07 30.5 0.0 4.1e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121639776|ref|YP_980000.1| - 1.3e-06 27.8 1.0 6.5e-06 25.5 0.0 2.4 2 1 1 3 3 3 1 FAD binding domain HI0933_like PF03486.14 gi|121639776|ref|YP_980000.1| - 3.7e-06 25.9 1.0 1.9e-05 23.6 0.1 2.3 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_7 PF13241.6 gi|121639776|ref|YP_980000.1| - 1.6e-05 25.3 1.5 0.0072 16.8 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|121639776|ref|YP_980000.1| - 2.9e-05 23.5 0.2 0.025 13.9 0.0 3.2 4 0 0 4 4 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|121639776|ref|YP_980000.1| - 4.2e-05 22.9 0.2 4.2e-05 22.9 0.2 2.0 2 0 0 2 2 2 1 FAD binding domain FMO-like PF00743.19 gi|121639776|ref|YP_980000.1| - 0.00021 19.9 0.0 0.017 13.6 0.0 2.1 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like Thi4 PF01946.17 gi|121639776|ref|YP_980000.1| - 0.00023 20.5 0.4 0.00073 18.8 0.0 1.9 2 0 0 2 2 2 1 Thi4 family AlaDh_PNT_C PF01262.21 gi|121639776|ref|YP_980000.1| - 0.0015 17.9 1.9 0.072 12.4 0.3 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|121639776|ref|YP_980000.1| - 0.0021 18.6 0.0 1.8 9.2 0.1 2.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent K_oxygenase PF13434.6 gi|121639776|ref|YP_980000.1| - 0.003 16.7 0.0 1.2 8.3 0.0 2.7 4 0 0 4 4 3 1 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.22 gi|121639776|ref|YP_980000.1| - 0.0038 16.4 0.0 0.0038 16.4 0.0 2.2 3 0 0 3 3 3 1 Glucose inhibited division protein A AdoHcyase_NAD PF00670.21 gi|121639776|ref|YP_980000.1| - 0.0045 17.1 0.5 1.2 9.1 0.1 2.4 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.20 gi|121639776|ref|YP_980000.1| - 0.0073 16.4 0.0 0.85 9.7 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 gi|121639776|ref|YP_980000.1| - 0.011 15.6 0.0 0.023 14.6 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ-1_PfpI PF01965.24 gi|121639776|ref|YP_980000.1| - 0.013 15.4 1.6 0.095 12.5 0.1 2.8 2 1 1 3 3 3 0 DJ-1/PfpI family Lycopene_cycl PF05834.12 gi|121639776|ref|YP_980000.1| - 0.022 13.8 0.3 0.054 12.5 0.1 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|121639776|ref|YP_980000.1| - 0.025 14.6 4.5 0.049 13.6 0.1 3.3 4 0 0 4 4 4 0 FAD-NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 gi|121639776|ref|YP_980000.1| - 0.03 14.3 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YjeF_N PF03853.15 gi|121639776|ref|YP_980000.1| - 0.033 14.1 0.1 0.46 10.3 0.0 2.2 2 0 0 2 2 2 0 YjeF-related protein N-terminus IlvN PF07991.12 gi|121639776|ref|YP_980000.1| - 0.055 13.0 1.2 0.18 11.4 0.0 2.0 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Kelch_3 PF13415.6 gi|121639776|ref|YP_980000.1| - 0.1 12.9 0.0 2.3 8.6 0.0 2.6 2 0 0 2 2 2 0 Galactose oxidase, central domain ApbA PF02558.16 gi|121639776|ref|YP_980000.1| - 0.12 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ELFV_dehydrog PF00208.21 gi|121639776|ref|YP_980000.1| - 0.13 12.0 0.1 2.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TrkA_N PF02254.18 gi|121639776|ref|YP_980000.1| - 0.14 12.4 0.9 0.78 10.0 0.0 2.3 2 0 0 2 2 2 0 TrkA-N domain Trp_halogenase PF04820.14 gi|121639776|ref|YP_980000.1| - 5 5.9 6.3 0.34 9.7 0.1 2.0 3 0 0 3 3 3 0 Tryptophan halogenase GATase_2 PF00310.21 gi|121639777|ref|YP_980001.1| - 3e-180 599.4 0.0 3.9e-180 599.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Glu_synthase PF01645.17 gi|121639777|ref|YP_980001.1| - 8.4e-152 505.6 0.0 1.5e-149 498.2 0.0 2.5 2 0 0 2 2 2 2 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|121639777|ref|YP_980001.1| - 6.7e-113 376.8 0.0 9.9e-113 376.2 0.0 1.3 1 0 0 1 1 1 1 Glutamate synthase central domain GXGXG PF01493.19 gi|121639777|ref|YP_980001.1| - 2.5e-81 271.8 5.5 4.3e-81 271.1 5.5 1.3 1 0 0 1 1 1 1 GXGXG motif FMN_dh PF01070.18 gi|121639777|ref|YP_980001.1| - 2.5 7.0 8.3 0.12 11.4 1.2 2.2 2 0 0 2 2 2 0 FMN-dependent dehydrogenase CbiA PF01656.23 gi|121639778|ref|YP_980002.1| - 2.5e-07 30.8 0.0 4.7e-07 29.9 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|121639778|ref|YP_980002.1| - 0.00028 20.2 0.4 0.00042 19.6 0.4 1.1 1 0 0 1 1 1 1 Anion-transporting ATPase Mg_chelatase PF01078.21 gi|121639778|ref|YP_980002.1| - 0.00035 20.0 0.0 0.00057 19.3 0.0 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_31 PF13614.6 gi|121639778|ref|YP_980002.1| - 0.00057 19.8 0.1 0.013 15.4 0.1 2.2 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|121639778|ref|YP_980002.1| - 0.0083 15.6 0.6 0.017 14.6 0.6 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_16 PF13191.6 gi|121639778|ref|YP_980002.1| - 0.011 16.1 0.5 0.037 14.4 0.2 1.6 1 1 0 1 1 1 0 AAA ATPase domain Fer4_NifH PF00142.18 gi|121639778|ref|YP_980002.1| - 0.037 13.5 0.1 0.068 12.6 0.1 1.4 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|121639778|ref|YP_980002.1| - 0.058 13.1 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|121639778|ref|YP_980002.1| - 0.22 11.0 0.0 0.47 9.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region HJURP_mid PF12346.8 gi|121639779|ref|YP_980003.1| - 0.085 13.3 0.6 0.085 13.3 0.6 1.2 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat Whib PF02467.16 gi|121639780|ref|YP_980004.1| - 1.4e-07 31.9 1.1 2.3e-07 31.3 1.1 1.3 1 0 0 1 1 1 1 Transcription factor WhiB HTH_3 PF01381.22 gi|121639781|ref|YP_980005.1| - 0.00089 19.3 1.7 0.013 15.6 0.1 3.0 2 1 1 3 3 3 1 Helix-turn-helix HTH_19 PF12844.7 gi|121639781|ref|YP_980005.1| - 0.0068 16.4 0.4 4 7.5 0.1 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain FHA PF00498.26 gi|121639781|ref|YP_980005.1| - 0.018 15.4 0.5 0.034 14.5 0.5 1.5 1 0 0 1 1 1 0 FHA domain HTH_31 PF13560.6 gi|121639781|ref|YP_980005.1| - 1.1 9.7 15.0 0.3 11.5 2.6 3.1 2 1 0 2 2 2 0 Helix-turn-helix domain T7SS_ESX_EspC PF10824.8 gi|121639783|ref|YP_980007.1| - 6.2e-27 94.0 0.0 6.8e-27 93.9 0.0 1.0 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm ESX-1_EspG PF14011.6 gi|121639784|ref|YP_980008.1| - 1.7e-54 185.0 13.2 2e-54 184.8 13.2 1.1 1 0 0 1 1 1 1 EspG family YbaB_DNA_bd PF02575.16 gi|121639785|ref|YP_980009.1| - 0.0075 16.5 0.1 0.011 15.9 0.1 1.3 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family DUF2694 PF10904.8 gi|121639785|ref|YP_980009.1| - 0.034 14.2 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2694) Sox17_18_mid PF12067.8 gi|121639785|ref|YP_980009.1| - 0.098 12.7 0.4 3.5 7.7 0.1 2.5 2 0 0 2 2 2 0 Sox 17/18 central domain AAA PF00004.29 gi|121639786|ref|YP_980010.1| - 2.4e-22 79.8 0.0 7.6e-22 78.1 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_6 PF17866.1 gi|121639786|ref|YP_980010.1| - 2.1e-07 31.0 3.3 8.1e-07 29.1 3.3 2.1 1 0 0 1 1 1 1 AAA lid domain RuvB_N PF05496.12 gi|121639786|ref|YP_980010.1| - 6.2e-06 26.0 0.2 1.8e-05 24.5 0.2 1.8 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|121639786|ref|YP_980010.1| - 7.1e-06 25.6 0.6 6.8e-05 22.3 0.2 2.4 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|121639786|ref|YP_980010.1| - 3.1e-05 24.2 0.6 0.0031 17.8 0.2 2.9 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|121639786|ref|YP_980010.1| - 0.00061 19.6 0.2 0.00061 19.6 0.2 2.2 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|121639786|ref|YP_980010.1| - 0.00072 19.6 0.2 0.0034 17.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 gi|121639786|ref|YP_980010.1| - 0.0013 19.1 0.2 0.0033 17.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|121639786|ref|YP_980010.1| - 0.0014 19.2 0.1 0.005 17.4 0.0 2.1 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|121639786|ref|YP_980010.1| - 0.0017 18.5 1.1 0.022 14.9 0.1 2.8 2 1 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|121639786|ref|YP_980010.1| - 0.0018 18.2 0.1 0.005 16.8 0.1 1.7 2 0 0 2 2 2 1 NTPase AAA_16 PF13191.6 gi|121639786|ref|YP_980010.1| - 0.0021 18.5 5.7 0.0046 17.4 3.4 2.7 1 1 1 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 gi|121639786|ref|YP_980010.1| - 0.0066 16.0 1.9 0.021 14.4 0.1 2.4 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|121639786|ref|YP_980010.1| - 0.0069 16.8 0.0 0.015 15.7 0.0 1.5 1 0 0 1 1 1 1 RNA helicase DUF815 PF05673.13 gi|121639786|ref|YP_980010.1| - 0.012 14.8 0.2 2.3 7.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TPR_6 PF13174.6 gi|121639786|ref|YP_980010.1| - 0.017 15.7 2.4 3.8 8.4 0.0 3.7 2 0 0 2 2 2 0 Tetratricopeptide repeat Sigma54_activat PF00158.26 gi|121639786|ref|YP_980010.1| - 0.018 14.8 0.2 0.57 9.9 0.2 2.4 1 1 0 1 1 1 0 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 gi|121639786|ref|YP_980010.1| - 0.031 14.4 0.0 0.2 11.7 0.0 2.4 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_28 PF13521.6 gi|121639786|ref|YP_980010.1| - 0.042 14.1 0.1 0.042 14.1 0.1 3.2 4 0 0 4 4 3 0 AAA domain DUF218 PF02698.17 gi|121639786|ref|YP_980010.1| - 0.048 13.7 0.6 3.6 7.6 0.0 2.7 2 1 0 2 2 2 0 DUF218 domain AAA_7 PF12775.7 gi|121639786|ref|YP_980010.1| - 0.053 13.0 0.1 0.095 12.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_11 PF13086.6 gi|121639786|ref|YP_980010.1| - 0.054 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|121639786|ref|YP_980010.1| - 0.056 13.2 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ATPase_2 PF01637.18 gi|121639786|ref|YP_980010.1| - 0.12 12.3 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_2 PF07724.14 gi|121639786|ref|YP_980010.1| - 0.13 12.4 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) TsaE PF02367.17 gi|121639786|ref|YP_980010.1| - 0.17 11.9 0.0 0.81 9.7 0.0 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TPR_14 PF13428.6 gi|121639786|ref|YP_980010.1| - 0.52 11.3 0.1 0.52 11.3 0.1 4.8 4 1 0 4 4 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 gi|121639786|ref|YP_980010.1| - 8.2 7.0 15.0 0.59 10.7 0.2 4.0 5 0 0 5 5 4 0 Tetratricopeptide repeat T7SS_ESX1_EccB PF05108.13 gi|121639787|ref|YP_980011.1| - 7.2e-162 539.3 2.3 8.2e-162 539.2 2.3 1.0 1 0 0 1 1 1 1 Type VII secretion system ESX-1, transport TM domain B FtsK_SpoIIIE PF01580.18 gi|121639788|ref|YP_980012.1| - 3.9e-49 167.2 0.0 7.4e-47 159.7 0.0 3.1 2 1 0 2 2 2 1 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|121639788|ref|YP_980012.1| - 0.00037 19.5 0.0 0.19 10.6 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 gi|121639788|ref|YP_980012.1| - 0.0082 16.4 0.0 0.019 15.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 gi|121639788|ref|YP_980012.1| - 0.0095 16.1 0.1 0.017 15.2 0.1 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 gi|121639788|ref|YP_980012.1| - 0.15 10.9 0.1 0.26 10.1 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Adeno_IVa2 PF02456.15 gi|121639788|ref|YP_980012.1| - 0.3 9.9 0.0 0.45 9.2 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein FtsK_SpoIIIE PF01580.18 gi|121639789|ref|YP_980013.1| - 2.2e-57 194.2 0.0 1.1e-43 149.3 0.0 2.1 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_16 PF13191.6 gi|121639789|ref|YP_980013.1| - 2.4e-07 31.3 0.0 0.022 15.1 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|121639789|ref|YP_980013.1| - 2.2e-05 24.8 0.0 0.38 11.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|121639789|ref|YP_980013.1| - 2.7e-05 23.8 0.1 0.16 11.7 0.0 3.0 3 0 0 3 3 3 2 P-loop containing region of AAA domain NACHT PF05729.12 gi|121639789|ref|YP_980013.1| - 3.8e-05 23.7 0.0 0.79 9.6 0.0 3.2 3 0 0 3 3 3 2 NACHT domain AAA_25 PF13481.6 gi|121639789|ref|YP_980013.1| - 7e-05 22.5 0.2 0.21 11.1 0.1 2.7 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|121639789|ref|YP_980013.1| - 0.00024 21.7 0.0 0.48 11.0 0.0 2.5 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|121639789|ref|YP_980013.1| - 0.0009 19.6 0.0 0.61 10.5 0.0 2.7 3 0 0 3 3 2 1 RNA helicase MMR_HSR1 PF01926.23 gi|121639789|ref|YP_980013.1| - 0.0024 17.9 0.2 0.21 11.7 0.1 2.8 3 1 0 3 3 2 1 50S ribosome-binding GTPase AAA_14 PF13173.6 gi|121639789|ref|YP_980013.1| - 0.0068 16.4 0.0 3.1 7.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain ATP-synt_ab PF00006.25 gi|121639789|ref|YP_980013.1| - 0.007 16.1 0.0 2.9 7.5 0.0 2.2 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain IstB_IS21 PF01695.17 gi|121639789|ref|YP_980013.1| - 0.011 15.5 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.29 gi|121639789|ref|YP_980013.1| - 0.02 15.3 0.1 1.4 9.3 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|121639789|ref|YP_980013.1| - 0.021 14.5 0.0 3 7.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|121639789|ref|YP_980013.1| - 0.041 14.1 0.0 8.6 6.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|121639789|ref|YP_980013.1| - 0.044 14.3 0.1 0.27 11.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|121639789|ref|YP_980013.1| - 0.044 14.1 0.1 9.9 6.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 gi|121639789|ref|YP_980013.1| - 0.044 12.9 0.1 1.7 7.7 0.1 2.3 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 NTPase_1 PF03266.15 gi|121639789|ref|YP_980013.1| - 0.063 13.2 0.1 17 5.3 0.0 2.6 2 0 0 2 2 2 0 NTPase Bac_DnaA PF00308.18 gi|121639789|ref|YP_980013.1| - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial dnaA protein ABC_tran PF00005.27 gi|121639789|ref|YP_980013.1| - 0.078 13.5 0.1 25 5.4 0.2 2.4 2 0 0 2 2 2 0 ABC transporter TniB PF05621.11 gi|121639789|ref|YP_980013.1| - 0.13 11.7 0.0 1 8.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein GTP_EFTU PF00009.27 gi|121639789|ref|YP_980013.1| - 0.19 11.2 0.0 2.5 7.6 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.9 gi|121639789|ref|YP_980013.1| - 0.24 10.3 0.1 1.2 7.9 0.0 2.0 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_30 PF13604.6 gi|121639789|ref|YP_980013.1| - 0.4 10.4 2.3 3.1 7.5 0.0 2.6 3 0 0 3 3 3 0 AAA domain YbaB_DNA_bd PF02575.16 gi|121639790|ref|YP_980014.1| - 7.5e-12 45.3 0.7 9.4e-12 45.0 0.7 1.2 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family ESX-1_EspG PF14011.6 gi|121639790|ref|YP_980014.1| - 0.0028 17.3 1.1 0.003 17.2 1.1 1.1 1 0 0 1 1 1 1 EspG family Polysacc_deac_2 PF04748.13 gi|121639790|ref|YP_980014.1| - 0.044 13.0 0.5 0.063 12.4 0.3 1.3 1 1 0 1 1 1 0 Divergent polysaccharide deacetylase SIMPL PF04402.14 gi|121639790|ref|YP_980014.1| - 0.092 13.2 2.6 0.11 13.0 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF541) DUF222 PF02720.17 gi|121639790|ref|YP_980014.1| - 0.38 10.2 7.3 0.42 10.0 5.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF222) EspB_PE PF18625.1 gi|121639791|ref|YP_980015.1| - 7.3e-30 103.3 6.1 2.2e-29 101.7 6.1 1.9 1 0 0 1 1 1 1 ESX-1 secreted protein B PE domain PPE PF00823.19 gi|121639791|ref|YP_980015.1| - 0.00064 19.9 0.7 0.00064 19.9 0.7 2.4 2 0 0 2 2 2 1 PPE family T7SS_ESX_EspC PF10824.8 gi|121639791|ref|YP_980015.1| - 0.0027 18.2 0.9 0.0027 18.2 0.9 2.7 3 0 0 3 3 3 1 Excreted virulence factor EspC, type VII ESX diderm WXG100 PF06013.12 gi|121639791|ref|YP_980015.1| - 0.4 10.9 10.2 0.22 11.7 3.4 3.2 2 2 0 2 2 2 0 Proteins of 100 residues with WXG EccE PF11203.8 gi|121639792|ref|YP_980016.1| - 5.3e-20 71.6 2.3 1e-19 70.6 2.3 1.5 1 0 0 1 1 1 1 Putative type VII ESX secretion system translocon, EccE DUF2271 PF10029.9 gi|121639792|ref|YP_980016.1| - 0.14 11.8 0.0 0.32 10.6 0.0 1.5 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Peptidase_S8 PF00082.22 gi|121639793|ref|YP_980017.1| - 3.2e-34 118.5 3.9 4.6e-33 114.8 3.9 2.0 1 1 0 1 1 1 1 Subtilase family AAA PF00004.29 gi|121639794|ref|YP_980018.1| - 3.5e-19 69.5 0.0 9e-19 68.2 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_6 PF17866.1 gi|121639794|ref|YP_980018.1| - 6.9e-12 45.4 0.3 6.9e-12 45.4 0.3 2.7 3 0 0 3 3 2 1 AAA lid domain AAA_22 PF13401.6 gi|121639794|ref|YP_980018.1| - 0.00083 19.6 0.8 0.0057 16.9 0.3 2.5 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|121639794|ref|YP_980018.1| - 0.0011 19.4 0.1 0.0011 19.4 0.1 2.4 2 1 1 3 3 3 1 AAA ATPase domain AAA_18 PF13238.6 gi|121639794|ref|YP_980018.1| - 0.0013 19.2 0.0 0.0062 17.1 0.0 2.2 3 0 0 3 3 2 1 AAA domain AAA_28 PF13521.6 gi|121639794|ref|YP_980018.1| - 0.0021 18.3 0.2 0.012 15.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|121639794|ref|YP_980018.1| - 0.0024 17.9 0.0 0.0065 16.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|121639794|ref|YP_980018.1| - 0.0028 17.1 0.0 0.0053 16.2 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 gi|121639794|ref|YP_980018.1| - 0.0039 17.0 0.0 0.0091 15.7 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|121639794|ref|YP_980018.1| - 0.0087 15.8 0.2 0.022 14.5 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_33 PF13671.6 gi|121639794|ref|YP_980018.1| - 0.0092 16.1 0.2 0.039 14.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|121639794|ref|YP_980018.1| - 0.016 15.5 0.2 0.053 13.9 0.2 1.8 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|121639794|ref|YP_980018.1| - 0.02 14.6 3.3 0.027 14.2 0.4 2.6 2 1 1 3 3 3 0 AAA domain Rad17 PF03215.15 gi|121639794|ref|YP_980018.1| - 0.033 14.1 0.0 0.06 13.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_24 PF13479.6 gi|121639794|ref|YP_980018.1| - 0.052 13.3 0.1 0.095 12.4 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|121639794|ref|YP_980018.1| - 0.055 12.6 0.0 0.56 9.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 gi|121639794|ref|YP_980018.1| - 0.065 12.7 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region SRP54 PF00448.22 gi|121639794|ref|YP_980018.1| - 0.11 12.1 0.6 0.21 11.2 0.6 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_11 PF13086.6 gi|121639794|ref|YP_980018.1| - 0.17 11.6 0.1 0.32 10.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain EccE PF11203.8 gi|121639795|ref|YP_980019.1| - 1.6e-18 66.8 5.8 1.6e-18 66.8 5.8 2.3 3 0 0 3 3 3 1 Putative type VII ESX secretion system translocon, EccE Peptidase_S8 PF00082.22 gi|121639796|ref|YP_980020.1| - 1.1e-21 77.4 8.9 3.5e-20 72.5 1.5 3.0 2 1 0 2 2 2 2 Subtilase family YukD PF08817.10 gi|121639797|ref|YP_980021.1| - 6.2e-12 46.0 0.0 2.5e-11 44.1 0.0 2.1 2 0 0 2 2 2 1 WXG100 protein secretion system (Wss), protein YukD DUF2339 PF10101.9 gi|121639797|ref|YP_980021.1| - 4.9e-06 25.4 42.5 1.6e-05 23.7 22.6 2.0 1 1 0 2 2 2 2 Predicted membrane protein (DUF2339) DUF2604 PF10790.9 gi|121639797|ref|YP_980021.1| - 0.019 15.3 0.0 0.041 14.2 0.0 1.5 1 0 0 1 1 1 0 Protein of Unknown function (DUF2604) SIS PF01380.22 gi|121639798|ref|YP_980022.1| - 0.086 12.7 0.2 0.49 10.2 0.1 1.9 1 1 1 2 2 2 0 SIS domain PDH PF02153.17 gi|121639798|ref|YP_980022.1| - 0.12 11.3 0.1 0.5 9.3 0.0 1.8 1 1 1 2 2 2 0 Prephenate dehydrogenase ESX-1_EspG PF14011.6 gi|121639800|ref|YP_980024.1| - 1.3e-36 126.5 21.7 1.5e-36 126.3 21.7 1.0 1 0 0 1 1 1 1 EspG family SecA_PP_bind PF01043.20 gi|121639800|ref|YP_980024.1| - 0.19 12.4 0.0 0.29 11.8 0.0 1.3 1 0 0 1 1 1 0 SecA preprotein cross-linking domain WXG100 PF06013.12 gi|121639801|ref|YP_980025.1| - 0.0035 17.5 0.0 0.0045 17.2 0.0 1.1 1 0 0 1 1 1 1 Proteins of 100 residues with WXG WXG100 PF06013.12 gi|121639802|ref|YP_980026.1| - 1.2e-13 51.1 0.9 1.2e-13 51.1 0.9 1.4 2 0 0 2 2 2 1 Proteins of 100 residues with WXG MTTB PF06253.11 gi|121639802|ref|YP_980026.1| - 0.00077 17.6 1.5 0.00078 17.5 1.5 1.1 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) T7SS_ESX_EspC PF10824.8 gi|121639802|ref|YP_980026.1| - 0.0049 17.3 5.2 0.0059 17.1 5.2 1.1 1 0 0 1 1 1 1 Excreted virulence factor EspC, type VII ESX diderm PPE PF00823.19 gi|121639803|ref|YP_980027.1| - 1.5e-23 83.6 12.3 1.5e-23 83.6 12.3 2.4 3 1 0 3 3 3 1 PPE family PE PF00934.20 gi|121639804|ref|YP_980028.1| - 2.3e-08 34.2 7.7 2.6e-08 34.0 7.7 1.0 1 0 0 1 1 1 1 PE family FtsK_SpoIIIE PF01580.18 gi|121639805|ref|YP_980029.1| - 1.6e-92 309.3 0.0 3.8e-84 281.8 0.0 2.7 3 0 0 3 3 3 2 FtsK/SpoIIIE family NACHT PF05729.12 gi|121639805|ref|YP_980029.1| - 4.9e-05 23.3 0.0 0.067 13.1 0.0 2.7 2 1 0 2 2 2 2 NACHT domain AAA_22 PF13401.6 gi|121639805|ref|YP_980029.1| - 6.7e-05 23.2 0.0 0.007 16.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|121639805|ref|YP_980029.1| - 0.00098 19.5 0.1 0.25 11.7 0.0 2.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 gi|121639805|ref|YP_980029.1| - 0.0026 17.4 0.0 1.5 8.3 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_14 PF13173.6 gi|121639805|ref|YP_980029.1| - 0.004 17.2 0.1 1.9 8.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|121639805|ref|YP_980029.1| - 0.018 15.4 0.0 1.4 9.3 0.0 2.4 2 0 0 2 2 2 0 RNA helicase AAA_29 PF13555.6 gi|121639805|ref|YP_980029.1| - 0.028 14.2 0.0 3.2 7.6 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|121639805|ref|YP_980029.1| - 0.03 14.8 0.0 0.18 12.3 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_19 PF13245.6 gi|121639805|ref|YP_980029.1| - 0.063 13.6 1.2 10 6.5 0.2 2.9 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|121639805|ref|YP_980029.1| - 0.096 12.3 0.5 4.4 6.9 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 gi|121639805|ref|YP_980029.1| - 0.1 13.1 0.0 0.55 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|121639805|ref|YP_980029.1| - 0.1 13.0 0.2 3.8 7.9 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 gi|121639805|ref|YP_980029.1| - 0.12 11.3 0.1 3.8 6.3 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Lambda_tail_I PF06805.12 gi|121639805|ref|YP_980029.1| - 0.12 12.7 0.0 0.43 10.9 0.0 1.9 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I Roc PF08477.13 gi|121639805|ref|YP_980029.1| - 0.13 12.5 0.0 15 5.9 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 gi|121639805|ref|YP_980029.1| - 0.13 12.4 0.0 20 5.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|121639805|ref|YP_980029.1| - 0.14 11.2 0.0 1.5 7.8 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein PduV-EutP PF10662.9 gi|121639805|ref|YP_980029.1| - 0.16 11.7 0.6 5.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation FtsK_SpoIIIE PF01580.18 gi|121639806|ref|YP_980030.1| - 3.8e-18 65.7 0.0 5.7e-16 58.6 0.0 2.3 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|121639806|ref|YP_980030.1| - 0.11 12.8 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain T7SS_ESX1_EccB PF05108.13 gi|121639807|ref|YP_980031.1| - 2.1e-153 511.4 6.4 2.3e-153 511.3 6.4 1.0 1 0 0 1 1 1 1 Type VII secretion system ESX-1, transport TM domain B SLT PF01464.20 gi|121639808|ref|YP_980032.1| - 0.00099 18.8 0.0 0.002 17.8 0.0 1.5 1 0 0 1 1 1 1 Transglycosylase SLT domain DUF5632 PF18646.1 gi|121639810|ref|YP_980034.1| - 1.1e-36 124.7 2.1 2.6e-36 123.5 2.1 1.6 1 0 0 1 1 1 1 Family of unknown function (DUF5632) DUF5631 PF18645.1 gi|121639810|ref|YP_980034.1| - 1.9e-34 117.9 2.5 2.2e-34 117.7 0.4 2.1 2 0 0 2 2 2 1 Family of unknown function (DUF5631) tRNA_edit PF04073.15 gi|121639810|ref|YP_980034.1| - 0.0012 18.9 0.1 0.0031 17.6 0.1 1.6 2 0 0 2 2 2 1 Aminoacyl-tRNA editing domain RskA PF10099.9 gi|121639812|ref|YP_980036.1| - 4.7 7.5 16.6 5.8 7.2 16.3 1.4 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Imm61 PF15598.6 gi|121639813|ref|YP_980037.1| - 5.1e-57 192.1 0.0 5.8e-57 191.9 0.0 1.0 1 0 0 1 1 1 1 Immunity protein 61 TNT PF14021.6 gi|121639814|ref|YP_980038.1| - 8.1e-16 58.4 0.0 2.8e-15 56.7 0.0 1.9 2 0 0 2 2 2 1 Tuberculosis necrotizing toxin WXG100 PF06013.12 gi|121639815|ref|YP_980039.1| - 4.6e-09 36.4 3.1 5.1e-09 36.3 3.1 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG WXG100 PF06013.12 gi|121639816|ref|YP_980040.1| - 1.8e-09 37.7 0.2 1.9e-09 37.6 0.2 1.0 1 0 0 1 1 1 1 Proteins of 100 residues with WXG RMF PF04957.12 gi|121639816|ref|YP_980040.1| - 0.034 14.4 0.0 0.045 14.0 0.0 1.2 1 0 0 1 1 1 0 Ribosome modulation factor T7SS_ESX_EspC PF10824.8 gi|121639816|ref|YP_980040.1| - 0.045 14.2 0.1 0.045 14.2 0.1 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm DUF5060 PF16586.5 gi|121639817|ref|YP_980041.1| - 0.096 13.1 0.4 3.5 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5060) EF-hand_5 PF13202.6 gi|121639817|ref|YP_980041.1| - 4.2 7.0 36.4 1.5 8.4 1.4 6.9 7 0 0 7 7 7 0 EF hand PolyA_pol PF01743.20 gi|121639818|ref|YP_980042.1| - 4.9e-32 111.0 0.0 9.7e-32 110.1 0.0 1.5 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 gi|121639818|ref|YP_980042.1| - 2.7e-18 65.5 0.0 6.2e-18 64.3 0.0 1.6 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HD PF01966.22 gi|121639818|ref|YP_980042.1| - 1.6e-14 54.2 0.9 3.2e-14 53.2 0.9 1.6 1 0 0 1 1 1 1 HD domain tRNA_NucTran2_2 PF13735.6 gi|121639818|ref|YP_980042.1| - 8.7e-06 25.8 0.0 1.9e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 tRNA nucleotidyltransferase domain 2 putative NUDIX PF00293.28 gi|121639819|ref|YP_980043.1| - 6.8e-20 71.4 0.2 9.9e-20 70.9 0.2 1.2 1 0 0 1 1 1 1 NUDIX domain RecC_C PF17946.1 gi|121639820|ref|YP_980044.1| - 0.14 11.9 0.8 2.9 7.6 0.2 2.4 2 0 0 2 2 2 0 RecC C-terminal domain DUF2393 PF09624.10 gi|121639820|ref|YP_980044.1| - 0.23 11.5 0.0 0.37 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) CarboxypepD_reg PF13620.6 gi|121639820|ref|YP_980044.1| - 3 8.2 7.1 0.63 10.3 1.2 3.0 3 0 0 3 3 3 0 Carboxypeptidase regulatory-like domain MurJ PF03023.14 gi|121639821|ref|YP_980045.1| - 1.7e-134 448.8 28.4 2.2e-134 448.5 28.4 1.1 1 0 0 1 1 1 1 Lipid II flippase MurJ Coiled-coil_56 PF09813.9 gi|121639821|ref|YP_980045.1| - 0.2 11.7 0.1 0.54 10.3 0.1 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 56 Sigma70_r2 PF04542.14 gi|121639822|ref|YP_980046.1| - 1.8e-16 59.7 3.0 3.6e-16 58.7 3.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|121639822|ref|YP_980046.1| - 1.3e-15 56.8 0.5 1.3e-15 56.8 0.5 2.2 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|121639822|ref|YP_980046.1| - 9.6e-09 35.4 4.3 3.1e-05 23.9 0.3 2.1 1 1 0 2 2 2 2 ECF sigma factor Sigma70_r4 PF04545.16 gi|121639822|ref|YP_980046.1| - 1.4e-07 30.9 0.1 3.6e-07 29.6 0.1 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|121639822|ref|YP_980046.1| - 0.0056 16.5 0.3 0.019 14.7 0.3 2.0 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|121639822|ref|YP_980046.1| - 0.0056 16.8 1.5 0.011 15.8 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|121639822|ref|YP_980046.1| - 0.0084 16.0 0.0 0.021 14.7 0.0 1.7 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) DUF746 PF05344.11 gi|121639822|ref|YP_980046.1| - 0.04 13.8 0.0 0.084 12.7 0.0 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) GerE PF00196.19 gi|121639822|ref|YP_980046.1| - 0.064 12.8 0.0 0.21 11.1 0.0 1.8 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family DUF134 PF02001.16 gi|121639822|ref|YP_980046.1| - 0.099 13.2 0.1 0.16 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF134 Pyr_redox_2 PF07992.14 gi|121639824|ref|YP_980048.1| - 1.4e-48 165.6 0.6 1.6e-48 165.4 0.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|121639824|ref|YP_980048.1| - 1.3e-23 83.7 0.0 2e-19 70.0 0.0 2.1 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|121639824|ref|YP_980048.1| - 3.5e-20 72.3 1.3 5.6e-19 68.5 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|121639824|ref|YP_980048.1| - 2.3e-08 34.0 9.4 0.0056 16.3 0.0 4.1 2 2 2 4 4 4 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|121639824|ref|YP_980048.1| - 5e-08 32.5 11.9 7.8e-05 21.9 0.8 4.6 1 1 4 5 5 5 3 FAD binding domain GIDA PF01134.22 gi|121639824|ref|YP_980048.1| - 8.2e-08 31.7 1.7 0.0054 15.9 0.7 3.8 3 1 1 4 4 4 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|121639824|ref|YP_980048.1| - 4e-07 29.8 4.9 1.6e-06 27.7 0.7 3.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 gi|121639824|ref|YP_980048.1| - 1.7e-06 27.4 0.2 0.0039 16.4 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|121639824|ref|YP_980048.1| - 7.8e-06 24.8 0.1 0.0035 16.1 0.1 3.4 4 0 0 4 4 4 1 HI0933-like protein Thi4 PF01946.17 gi|121639824|ref|YP_980048.1| - 3.6e-05 23.1 0.0 0.00069 18.9 0.0 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|121639824|ref|YP_980048.1| - 0.00012 22.2 0.1 0.0081 16.4 0.0 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|121639824|ref|YP_980048.1| - 0.001 18.2 2.4 0.77 8.7 0.0 3.0 3 1 0 4 4 4 2 Lycopene cyclase protein NAD_binding_7 PF13241.6 gi|121639824|ref|YP_980048.1| - 0.0094 16.4 0.2 0.088 13.3 0.0 2.2 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|121639824|ref|YP_980048.1| - 0.011 15.0 1.8 0.96 8.6 0.1 2.9 2 1 1 3 3 3 0 FAD binding domain Trp_halogenase PF04820.14 gi|121639824|ref|YP_980048.1| - 0.02 13.7 0.3 1 8.1 0.1 2.8 3 0 0 3 3 3 0 Tryptophan halogenase SnoaL_2 PF12680.7 gi|121639824|ref|YP_980048.1| - 0.035 14.7 2.6 0.1 13.3 0.9 2.6 1 1 2 3 3 3 0 SnoaL-like domain NAD_binding_9 PF13454.6 gi|121639824|ref|YP_980048.1| - 0.11 12.5 7.4 0.76 9.8 0.0 3.5 3 1 1 4 4 4 0 FAD-NAD(P)-binding Thioredoxin PF00085.20 gi|121639825|ref|YP_980049.1| - 4.5e-33 113.3 0.0 5.1e-33 113.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|121639825|ref|YP_980049.1| - 1.3e-09 38.5 0.1 1.7e-08 34.9 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|121639825|ref|YP_980049.1| - 1.1e-06 28.8 0.0 0.00018 21.7 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like KaiB PF07689.12 gi|121639825|ref|YP_980049.1| - 1.1e-05 25.0 0.0 1.7e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 KaiB domain Thioredoxin_9 PF14595.6 gi|121639825|ref|YP_980049.1| - 5e-05 23.1 0.0 5.6e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|121639825|ref|YP_980049.1| - 7.9e-05 22.8 0.0 0.00012 22.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 gi|121639825|ref|YP_980049.1| - 0.00011 21.9 0.1 0.00013 21.7 0.1 1.3 1 1 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|121639825|ref|YP_980049.1| - 0.00038 20.4 0.0 0.0015 18.4 0.0 1.7 1 1 1 2 2 2 1 AhpC/TSA family OST3_OST6 PF04756.13 gi|121639825|ref|YP_980049.1| - 0.0011 18.4 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 gi|121639825|ref|YP_980049.1| - 0.0015 18.5 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain TraF PF13728.6 gi|121639825|ref|YP_980049.1| - 0.0021 17.9 0.0 0.0026 17.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 gi|121639825|ref|YP_980049.1| - 0.066 13.4 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 gi|121639825|ref|YP_980049.1| - 0.083 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) PG_binding_1 PF01471.18 gi|121639826|ref|YP_980050.1| - 1.4e-30 105.3 3.2 4.7e-16 58.7 0.1 3.0 3 0 0 3 3 3 2 Putative peptidoglycan binding domain Amidase_3 PF01520.18 gi|121639826|ref|YP_980050.1| - 1.2e-29 103.6 0.0 2e-29 103.0 0.0 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase PG_binding_3 PF09374.10 gi|121639826|ref|YP_980050.1| - 1.7e-08 34.6 0.1 0.12 12.7 0.0 3.5 2 1 1 3 3 3 3 Predicted Peptidoglycan domain PG_binding_2 PF08823.11 gi|121639826|ref|YP_980050.1| - 1.9e-05 24.9 0.4 0.00042 20.6 0.1 2.8 2 1 0 2 2 2 1 Putative peptidoglycan binding domain ParBc PF02195.18 gi|121639828|ref|YP_980052.1| - 3.2e-26 91.4 0.2 6.4e-26 90.5 0.2 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain HTH_ParB PF17762.1 gi|121639828|ref|YP_980052.1| - 4.6e-16 58.3 0.4 9.8e-16 57.3 0.4 1.5 1 0 0 1 1 1 1 HTH domain found in ParB protein TrmB PF01978.19 gi|121639828|ref|YP_980052.1| - 0.022 14.6 0.0 0.056 13.3 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HOASN PF14515.6 gi|121639828|ref|YP_980052.1| - 0.076 13.4 0.1 7.1 7.1 0.1 2.5 2 0 0 2 2 2 0 Haem-oxygenase-associated N-terminal helices HTH_Crp_2 PF13545.6 gi|121639828|ref|YP_980052.1| - 0.084 12.9 0.3 0.64 10.0 0.1 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain SoPB_HTH PF18090.1 gi|121639828|ref|YP_980052.1| - 0.11 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Centromere-binding protein HTH domain KorB PF08535.10 gi|121639828|ref|YP_980052.1| - 0.13 12.3 0.0 2.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KorB domain AAA_31 PF13614.6 gi|121639829|ref|YP_980053.1| - 6.5e-58 195.5 0.0 9.4e-58 195.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|121639829|ref|YP_980053.1| - 1.8e-28 99.1 0.0 2.5e-28 98.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|121639829|ref|YP_980053.1| - 1.9e-10 40.6 2.0 3.1e-09 36.7 2.0 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|121639829|ref|YP_980053.1| - 1.1e-09 38.0 0.2 1.5e-07 31.0 0.1 2.4 3 0 0 3 3 3 1 ATPase MipZ Fer4_NifH PF00142.18 gi|121639829|ref|YP_980053.1| - 1.4e-09 37.8 0.1 4.3e-05 23.1 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|121639829|ref|YP_980053.1| - 2.3e-08 33.6 0.2 7.2e-08 32.0 0.2 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|121639829|ref|YP_980053.1| - 7.4e-05 22.3 0.1 0.00049 19.6 0.1 2.0 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|121639829|ref|YP_980053.1| - 0.0058 16.3 0.4 0.74 9.4 0.4 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain VirC1 PF07015.11 gi|121639829|ref|YP_980053.1| - 0.035 13.4 0.3 0.076 12.3 0.1 1.6 2 0 0 2 2 2 0 VirC1 protein AAA_25 PF13481.6 gi|121639829|ref|YP_980053.1| - 0.058 13.0 0.9 0.16 11.6 0.4 2.0 1 1 0 2 2 2 0 AAA domain MeaB PF03308.16 gi|121639829|ref|YP_980053.1| - 0.1 11.6 0.2 0.24 10.4 0.2 1.6 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|121639829|ref|YP_980053.1| - 0.17 11.7 0.6 0.57 9.9 0.0 2.1 3 1 0 3 3 3 0 mRNA cleavage and polyadenylation factor CLP1 P-loop GidB PF02527.15 gi|121639830|ref|YP_980054.1| - 1.1e-55 187.9 0.0 1.3e-55 187.6 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MTS PF05175.14 gi|121639830|ref|YP_980054.1| - 0.0022 17.6 0.0 0.0036 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain VP40 PF07447.12 gi|121639830|ref|YP_980054.1| - 0.08 12.0 0.0 0.098 11.8 0.0 1.1 1 0 0 1 1 1 0 Matrix protein VP40 Methyltransf_25 PF13649.6 gi|121639830|ref|YP_980054.1| - 0.12 13.0 0.0 0.24 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|121639830|ref|YP_980054.1| - 0.15 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase RrnaAD PF00398.20 gi|121639830|ref|YP_980054.1| - 0.16 11.0 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase R3H PF01424.22 gi|121639831|ref|YP_980055.1| - 6.5e-15 54.9 0.1 1.4e-14 53.8 0.1 1.6 2 0 0 2 2 2 1 R3H domain KH_4 PF13083.6 gi|121639831|ref|YP_980055.1| - 5.6e-07 29.3 0.0 9.3e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 KH domain 60KD_IMP PF02096.20 gi|121639832|ref|YP_980056.1| - 8.7e-49 165.6 0.4 1.2e-48 165.1 0.4 1.1 1 0 0 1 1 1 1 60Kd inner membrane protein Wzy_C PF04932.15 gi|121639832|ref|YP_980056.1| - 0.0084 15.8 0.1 0.28 10.8 0.0 2.2 2 0 0 2 2 2 1 O-Antigen ligase SicP-binding PF09119.10 gi|121639832|ref|YP_980056.1| - 0.082 12.9 0.2 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 SicP binding DUF2207 PF09972.9 gi|121639832|ref|YP_980056.1| - 0.13 11.0 1.6 1.7 7.3 0.6 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Halogen_Hydrol PF10112.9 gi|121639832|ref|YP_980056.1| - 0.25 11.4 1.4 0.62 10.1 0.3 2.1 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein LapA_dom PF06305.11 gi|121639832|ref|YP_980056.1| - 2.9 7.8 7.4 36 4.3 3.3 3.0 2 2 0 2 2 2 0 Lipopolysaccharide assembly protein A domain YidD PF01809.18 gi|121639833|ref|YP_980057.1| - 9.8e-27 92.6 0.1 1.3e-26 92.2 0.1 1.2 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor Ribonuclease_P PF00825.18 gi|121639834|ref|YP_980058.1| - 4.6e-23 81.4 0.3 5.3e-23 81.2 0.3 1.0 1 0 0 1 1 1 1 Ribonuclease P Ribosomal_L34 PF00468.17 gi|121639835|ref|YP_980059.1| - 3.6e-18 65.2 14.6 4e-18 65.1 14.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L34 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mycobacterium_bovis_BCG_Pasteur_1173P2_uid58781/NC_008769.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mycobacterium_bovis_BCG_Pasteur_1173P2_uid58781/NC_008769.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mycobacterium_bovis_BCG_Pasteur_1173P2_uid58781/NC_008769.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mycobacterium_bovis_BCG_Pasteur_1173P2_uid58781/NC_008769.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 03:25:40 2019 # [ok]