# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DnaA_N PF11638.8 AID27836.1 - 3e-19 68.5 0.0 3.8e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 DnaA N-terminal domain Ribosomal_S20p PF01649.18 AID27838.1 - 7.3e-25 87.4 14.8 8.1e-25 87.3 14.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 DFF40 PF09230.10 AID27838.1 - 0.046 13.3 0.6 0.05 13.2 0.6 1.1 1 0 0 1 1 1 0 DNA fragmentation factor 40 kDa ECH_1 PF00378.20 AID27839.1 - 2e-85 286.1 1.0 2.3e-85 285.9 1.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID27839.1 - 1.6e-38 133.1 3.2 1.7e-35 123.1 1.2 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 AID27839.1 - 0.016 15.1 0.1 0.3 11.0 0.0 2.2 2 0 0 2 2 2 0 Peptidase family S49 Trigger_C PF05698.14 AID27839.1 - 0.093 12.7 0.9 0.36 10.8 0.2 1.9 2 0 0 2 2 2 0 Bacterial trigger factor protein (TF) C-terminus Fapy_DNA_glyco PF01149.24 AID27840.1 - 2.6e-33 115.1 0.2 3.6e-33 114.6 0.2 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase N-terminal domain H2TH PF06831.14 AID27840.1 - 3.1e-20 71.9 0.0 5.5e-20 71.1 0.0 1.4 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 AID27840.1 - 2.2e-10 40.2 5.5 4.1e-10 39.3 5.5 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS Metalloenzyme PF01676.18 AID27841.1 - 2.9e-29 102.2 0.0 4.4e-29 101.6 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily GFRP PF06399.13 AID27841.1 - 0.16 11.9 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) Phosphonate-bd PF12974.7 AID27842.1 - 5.6e-39 134.2 0.2 6.4e-39 134.0 0.2 1.0 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein TadE PF07811.12 AID27843.1 - 1.3e-06 28.6 0.5 2.8e-06 27.5 0.5 1.6 1 0 0 1 1 1 1 TadE-like protein TadF PF16964.5 AID27843.1 - 0.00065 19.5 0.1 0.0012 18.7 0.1 1.5 1 1 0 1 1 1 1 Putative tight adherence pilin protein F Flp_Fap PF04964.14 AID27843.1 - 0.014 15.2 0.0 0.029 14.2 0.0 1.6 1 0 0 1 1 1 0 Flp/Fap pilin component TadE PF07811.12 AID27844.1 - 2.1e-05 24.7 0.3 3.5e-05 24.0 0.3 1.4 1 0 0 1 1 1 1 TadE-like protein Flp_Fap PF04964.14 AID27844.1 - 0.021 14.7 0.0 0.037 13.9 0.0 1.5 1 0 0 1 1 1 0 Flp/Fap pilin component TadF PF16964.5 AID27844.1 - 0.17 11.7 0.1 0.24 11.1 0.1 1.2 1 0 0 1 1 1 0 Putative tight adherence pilin protein F T2SS-T3SS_pil_N PF13629.6 AID27845.1 - 1.2e-21 76.1 3.6 1.8e-21 75.6 3.6 1.3 1 0 0 1 1 1 1 Pilus formation protein N terminal region PPV_E1_C PF00519.17 AID27845.1 - 0.0021 17.0 0.2 0.003 16.5 0.2 1.1 1 0 0 1 1 1 1 Papillomavirus helicase DUF2220 PF09983.9 AID27845.1 - 0.017 14.5 0.1 0.025 14.0 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) Flp_Fap PF04964.14 AID27847.1 - 3.4e-21 74.8 5.0 3.9e-21 74.6 5.0 1.1 1 0 0 1 1 1 1 Flp/Fap pilin component Flp1_like PF16982.5 AID27847.1 - 0.0037 16.6 0.4 0.0071 15.7 0.4 1.7 1 1 0 1 1 1 1 Putative Flagellin, Flp1-like, domain Peptidase_A24 PF01478.18 AID27848.1 - 7.4e-12 45.6 19.5 1.3e-11 44.9 19.5 1.4 1 0 0 1 1 1 1 Type IV leader peptidase family MtN3_slv PF03083.16 AID27848.1 - 0.67 10.0 7.6 0.095 12.8 2.7 2.0 3 0 0 3 3 3 0 Sugar efflux transporter for intercellular exchange RcpC PF16976.5 AID27849.1 - 1.7e-31 108.7 0.5 1.7e-31 108.7 0.5 1.8 2 0 0 2 2 2 1 Flp pilus assembly protein RcpC/CpaB SAF PF08666.12 AID27849.1 - 2e-08 34.7 0.0 4.2e-08 33.7 0.0 1.6 1 0 0 1 1 1 1 SAF domain Secretin PF00263.21 AID27850.1 - 7.1e-41 139.7 1.5 7.1e-41 139.7 1.5 2.2 3 0 0 3 3 3 1 Bacterial type II and III secretion system protein T2SS-T3SS_pil_N PF13629.6 AID27850.1 - 7e-21 73.7 0.1 1.7e-20 72.5 0.1 1.7 1 0 0 1 1 1 1 Pilus formation protein N terminal region BON PF04972.17 AID27850.1 - 1.3e-07 31.8 0.0 4.8e-07 30.0 0.0 2.0 1 0 0 1 1 1 1 BON domain CF222 PF15661.5 AID27850.1 - 0.22 10.4 0.1 0.32 9.9 0.1 1.1 1 0 0 1 1 1 0 C6orf222, uncharacterised family DUF2798 PF11391.8 AID27851.1 - 0.023 14.7 0.1 0.03 14.4 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2798) Pilus_CpaD PF09476.10 AID27852.1 - 9.3e-64 214.9 0.3 1e-63 214.7 0.3 1.0 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) AAA_31 PF13614.6 AID27853.1 - 1.7e-08 34.6 0.0 3.1e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 AID27853.1 - 1.1e-05 25.1 0.5 0.00026 20.5 0.0 2.4 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 AID27853.1 - 1.1e-05 25.0 0.1 2.9e-05 23.7 0.1 1.6 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ CbiA PF01656.23 AID27853.1 - 0.0011 19.0 0.0 0.0023 18.0 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 AID27853.1 - 0.015 14.6 0.2 0.099 11.9 0.2 2.1 1 1 0 1 1 1 0 ATPase MipZ ArsA_ATPase PF02374.15 AID27853.1 - 0.027 13.6 0.1 0.051 12.8 0.1 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase Fer4_NifH PF00142.18 AID27853.1 - 0.14 11.5 0.0 2 7.8 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family T2SSE PF00437.20 AID27854.1 - 5.5e-78 261.8 0.0 6.5e-78 261.5 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 AID27854.1 - 0.00032 21.2 0.0 0.0015 19.1 0.0 2.0 2 1 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 AID27854.1 - 0.00056 20.3 0.0 0.0012 19.2 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 AID27854.1 - 0.0015 18.8 0.0 0.0027 17.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID27854.1 - 0.0027 18.2 1.6 0.006 17.1 1.6 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID27854.1 - 0.0065 15.8 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 AID27854.1 - 0.0096 16.2 0.0 0.031 14.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 AID27854.1 - 0.013 15.1 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.18 AID27854.1 - 0.026 13.9 0.6 0.053 12.9 0.1 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_29 PF13555.6 AID27854.1 - 0.032 14.0 0.0 0.063 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 AID27854.1 - 0.035 14.5 0.0 0.07 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain dNK PF01712.19 AID27854.1 - 0.052 13.4 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA_30 PF13604.6 AID27854.1 - 0.054 13.2 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID27854.1 - 0.078 12.9 0.0 0.5 10.3 0.1 2.1 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 AID27854.1 - 0.081 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 AID27854.1 - 0.1 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 AID27854.1 - 0.11 11.4 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 AID27854.1 - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Pox_A32 PF04665.12 AID27854.1 - 0.12 11.8 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein Septin PF00735.18 AID27854.1 - 0.13 11.5 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_2 PF07724.14 AID27854.1 - 0.14 12.3 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) T2SSF PF00482.23 AID27855.1 - 1.3e-22 80.1 0.3 3.6e-22 78.6 0.3 1.8 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 AID27855.1 - 0.019 13.7 2.0 0.39 9.4 0.0 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) T2SSF PF00482.23 AID27856.1 - 2.1e-20 72.9 2.3 2.1e-20 72.9 2.3 3.0 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F UCMA PF17085.5 AID27856.1 - 0.023 14.7 0.7 0.071 13.1 0.3 1.9 2 0 0 2 2 2 0 Unique cartilage matrix associated protein FUSC_2 PF13515.6 AID27856.1 - 5.7 7.1 8.3 1.3 9.1 1.2 2.5 3 0 0 3 3 3 0 Fusaric acid resistance protein-like TPR_2 PF07719.17 AID27857.1 - 1.6e-13 49.7 5.7 2.9e-05 23.8 0.2 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_17 PF13431.6 AID27857.1 - 1.9e-13 49.7 9.1 0.00013 22.1 0.0 5.7 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 AID27857.1 - 4.1e-12 46.4 23.7 5.5e-05 23.6 3.4 3.5 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 AID27857.1 - 2.3e-11 43.0 4.0 5.7e-05 22.8 0.5 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID27857.1 - 9e-11 41.7 19.9 0.001 19.7 0.1 6.1 2 1 4 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 AID27857.1 - 1.5e-09 37.4 2.0 3e-07 30.0 0.0 3.4 4 0 0 4 4 4 1 TPR repeat TPR_8 PF13181.6 AID27857.1 - 4.3e-09 35.9 6.0 0.0004 20.4 0.2 5.5 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID27857.1 - 4.8e-09 36.4 13.8 0.0062 16.8 0.1 4.7 2 2 1 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 AID27857.1 - 6.2e-09 36.4 17.2 0.00014 22.4 0.4 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_15 PF13429.6 AID27857.1 - 1.9e-07 30.6 12.1 0.0026 17.0 3.2 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 AID27857.1 - 2.2e-07 30.8 17.8 2.1 9.2 2.9 6.4 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_10 PF13374.6 AID27857.1 - 5.6e-06 26.1 14.9 0.051 13.5 0.3 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat Wzy_C_2 PF11846.8 AID27857.1 - 7.8e-06 25.9 12.6 0.037 13.9 0.1 4.6 1 1 2 3 3 3 2 Virulence factor membrane-bound polymerase, C-terminal TPR_7 PF13176.6 AID27857.1 - 1.4e-05 24.7 1.7 0.35 11.0 0.0 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 AID27857.1 - 8.3e-05 22.7 1.4 0.18 12.0 0.2 3.4 1 1 3 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 AID27857.1 - 0.002 17.1 0.8 0.0035 16.3 0.8 1.4 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 AID27857.1 - 0.006 17.1 16.5 3.8 8.4 0.2 5.5 5 0 0 5 5 5 2 Tetratricopeptide repeat Coatomer_E PF04733.14 AID27857.1 - 0.014 14.8 0.9 0.42 10.0 0.0 2.8 1 1 1 3 3 3 0 Coatomer epsilon subunit TPR_5 PF12688.7 AID27857.1 - 0.048 13.9 5.3 0.17 12.1 0.7 3.0 1 1 1 2 2 2 0 Tetratrico peptide repeat ChAPs PF09295.10 AID27857.1 - 0.14 11.1 0.1 0.18 10.7 0.1 1.2 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) LPAM_2 PF13627.6 AID27857.1 - 0.55 10.1 6.0 1.3 9.0 6.0 1.7 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site Peptidase_M17 PF00883.21 AID27858.1 - 2.8e-103 345.4 0.0 3.4e-103 345.2 0.0 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain MarR_2 PF12802.7 AID27859.1 - 4.1e-11 42.6 0.1 5.5e-11 42.2 0.1 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID27859.1 - 5.9e-11 42.1 0.0 8.2e-11 41.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID27859.1 - 0.00019 21.9 0.1 0.00023 21.6 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 AID27859.1 - 0.0038 16.8 0.1 0.0064 16.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID27859.1 - 0.022 14.3 0.0 0.051 13.2 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID27859.1 - 0.027 14.3 0.1 0.041 13.7 0.1 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Dimerisation2 PF16864.5 AID27859.1 - 0.032 14.2 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Dimerisation domain HTH_11 PF08279.12 AID27859.1 - 0.036 14.0 0.0 0.053 13.5 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 AID27859.1 - 0.077 13.0 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF4423 PF14394.6 AID27859.1 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) SH3_16 PF18348.1 AID27860.1 - 3.2e-19 68.5 0.4 1.7e-17 62.9 0.2 2.4 2 0 0 2 2 2 1 Bacterial dipeptidyl-peptidase Sh3 domain NLPC_P60 PF00877.19 AID27860.1 - 4.6e-14 52.3 0.0 9.4e-14 51.3 0.0 1.5 1 0 0 1 1 1 1 NlpC/P60 family SH3_3 PF08239.11 AID27860.1 - 1.6e-08 34.7 0.0 3.2e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 Bacterial SH3 domain DEAD_assoc PF08494.11 AID27861.1 - 5.5e-48 163.3 0.0 1e-47 162.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 AID27861.1 - 9.4e-25 87.4 0.0 1.7e-24 86.5 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AID27861.1 - 3.4e-14 53.1 0.0 7.8e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 AID27861.1 - 0.0056 16.7 0.0 0.012 15.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Metallophos PF00149.28 AID27862.1 - 9.3e-08 32.8 0.0 1.2e-07 32.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID27862.1 - 0.0071 16.5 0.0 0.0094 16.2 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DmsC PF04976.12 AID27863.1 - 1.4e-89 300.3 14.3 1.6e-89 300.1 14.3 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) NrfD PF03916.14 AID27863.1 - 0.12 12.0 19.5 0.52 9.9 12.6 3.0 2 1 0 2 2 2 0 Polysulphide reductase, NrfD Fer4_11 PF13247.6 AID27864.1 - 5.1e-24 84.3 8.9 5.1e-24 84.3 8.9 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID27864.1 - 9.3e-15 55.0 26.2 1.2e-06 29.0 11.2 3.6 2 2 2 4 4 4 4 4Fe-4S dicluster domain Fer4 PF00037.27 AID27864.1 - 1e-14 53.6 37.7 4.8e-09 35.7 2.2 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_6 PF12837.7 AID27864.1 - 2.3e-14 52.8 34.0 3.1e-07 30.2 1.3 4.9 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_10 PF13237.6 AID27864.1 - 1.9e-13 50.3 27.2 3.6e-07 30.2 7.8 3.3 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID27864.1 - 4e-13 48.6 35.5 2.1e-06 27.5 0.9 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 AID27864.1 - 3.5e-11 43.1 22.0 3.3e-06 27.2 6.1 3.0 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 AID27864.1 - 9.9e-11 41.8 36.0 0.0073 17.2 6.1 4.7 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_4 PF12800.7 AID27864.1 - 3.1e-08 33.5 32.0 0.004 17.5 0.9 4.9 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_21 PF14697.6 AID27864.1 - 4.4e-06 26.7 29.3 0.00018 21.5 10.7 3.9 4 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID27864.1 - 8.3e-06 26.2 23.0 0.00042 20.7 5.8 3.9 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 AID27864.1 - 0.0039 17.7 26.1 0.8 10.3 0.6 4.6 3 2 1 4 4 4 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 AID27864.1 - 0.0097 16.6 0.8 0.0097 16.6 0.8 3.5 3 1 0 3 3 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 AID27864.1 - 0.023 14.9 23.0 0.028 14.6 6.2 3.8 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 AID27864.1 - 0.025 15.1 31.8 0.12 12.9 12.3 3.9 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 AID27864.1 - 0.071 14.1 30.5 3.6 8.6 1.5 4.6 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_5 PF12801.7 AID27864.1 - 6.6 6.8 6.7 1.7 8.6 2.3 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Molybdopterin PF00384.22 AID27866.1 - 1.3e-32 113.3 0.0 1.1e-31 110.3 0.0 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 AID27866.1 - 6.7e-17 61.2 4.4 1.4e-16 60.2 4.4 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 AID27866.1 - 1.1e-11 44.8 0.1 2.1e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain HTH_Tnp_ISL3 PF13542.6 AID27866.1 - 2 7.9 4.4 0.41 10.1 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 LysR_substrate PF03466.20 AID27867.1 - 1.7e-42 145.1 4.7 2.6e-42 144.6 4.7 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID27867.1 - 7.5e-21 73.8 1.2 2.5e-20 72.2 1.2 2.0 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 AID27867.1 - 8.2e-09 34.9 0.1 2.2e-08 33.5 0.1 1.8 1 1 0 1 1 1 1 PBP superfamily domain HTH_8 PF02954.19 AID27867.1 - 0.004 16.9 0.2 0.017 14.9 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family HTH_24 PF13412.6 AID27867.1 - 0.014 15.0 0.2 0.15 11.6 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID27867.1 - 0.028 14.3 4.8 0.045 13.7 0.4 3.1 3 0 0 3 3 3 0 MarR family HTH_28 PF13518.6 AID27867.1 - 0.03 14.5 1.3 0.079 13.1 0.1 2.3 3 0 0 3 3 3 0 Helix-turn-helix domain Cro PF09048.10 AID27867.1 - 0.038 14.0 0.4 0.12 12.4 0.1 2.0 2 0 0 2 2 2 0 Cro MlrC_C PF07171.12 AID27867.1 - 0.057 13.6 0.7 0.17 12.0 0.1 2.1 2 0 0 2 2 2 0 MlrC C-terminus MarR PF01047.22 AID27867.1 - 0.083 12.8 0.1 1.5 8.8 0.1 2.4 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.6 AID27867.1 - 0.09 12.6 0.4 0.37 10.6 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_20 PF12840.7 AID27867.1 - 0.097 12.8 3.5 0.48 10.5 0.1 3.1 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_10 PF04967.12 AID27867.1 - 0.68 9.8 2.3 3.4 7.6 0.2 3.0 3 0 0 3 3 3 0 HTH DNA binding domain HSP70 PF00012.20 AID27868.1 - 2.2e-28 98.9 0.2 6.5e-15 54.3 0.1 3.0 2 1 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 AID27868.1 - 4.7e-06 25.6 0.4 3.2e-05 22.9 0.0 2.3 3 0 0 3 3 3 1 MreB/Mbl protein StbA PF06406.11 AID27868.1 - 0.0069 15.7 0.0 0.15 11.3 0.0 2.3 2 0 0 2 2 2 1 StbA protein FtsA PF14450.6 AID27868.1 - 0.023 15.1 0.6 12 6.4 0.0 3.0 3 0 0 3 3 3 0 Cell division protein FtsA TauE PF01925.19 AID27869.1 - 4.3e-26 92.0 19.0 5.4e-26 91.7 19.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3488 PF11992.8 AID27869.1 - 2 7.3 8.6 2.5 7.0 8.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3488) Alph_Pro_TM PF09608.10 AID27870.1 - 5.1e-78 262.0 0.0 5.9e-78 261.8 0.0 1.0 1 0 0 1 1 1 1 Putative transmembrane protein (Alph_Pro_TM) Sel1 PF08238.12 AID27871.1 - 1.4e-20 73.2 11.6 2.1e-07 31.4 0.1 5.0 4 0 0 4 4 4 4 Sel1 repeat PG_binding_1 PF01471.18 AID27871.1 - 3.1e-13 49.7 0.0 9.7e-13 48.1 0.0 2.0 1 0 0 1 1 1 1 Putative peptidoglycan binding domain Dynamitin PF04912.14 AID27871.1 - 6.9e-05 22.3 13.1 0.0011 18.3 1.0 4.4 3 2 1 4 4 4 2 Dynamitin NPV_P10 PF05531.12 AID27871.1 - 0.00013 22.4 11.3 8.9 6.9 0.2 8.6 4 1 3 8 8 8 1 Nucleopolyhedrovirus P10 protein ABC_tran_CTD PF16326.5 AID27871.1 - 0.0028 17.9 18.7 0.27 11.5 0.0 7.5 8 1 0 8 8 8 1 ABC transporter C-terminal domain HalX PF08663.10 AID27871.1 - 0.017 15.4 0.6 0.017 15.4 0.6 9.6 7 2 1 10 10 10 0 HalX domain DUF2730 PF10805.8 AID27871.1 - 0.035 14.2 5.8 2.8 8.1 0.0 4.9 4 1 0 5 5 5 0 Protein of unknown function (DUF2730) MtrG PF04210.13 AID27871.1 - 0.094 12.6 1.6 39 4.2 0.2 4.9 6 1 0 6 6 6 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF16 PF01519.16 AID27871.1 - 1.2 9.7 14.6 13 6.3 0.0 5.5 4 2 2 6 6 6 0 Protein of unknown function DUF16 Matrilin_ccoil PF10393.9 AID27871.1 - 1.6 8.7 10.8 18 5.3 0.0 5.8 6 0 0 6 6 6 0 Trimeric coiled-coil oligomerisation domain of matrilin Allexi_40kDa PF05549.11 AID27871.1 - 2 7.9 9.8 2.7 7.4 0.1 3.8 4 1 1 5 5 5 0 Allexivirus 40kDa protein YvrJ PF12841.7 AID27871.1 - 3.5 7.2 5.3 9 5.9 0.2 4.0 4 0 0 4 4 4 0 YvrJ protein family MerR_1 PF13411.6 AID27872.1 - 3.9e-18 65.3 0.2 9.1e-18 64.1 0.2 1.6 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 AID27872.1 - 3.5e-12 45.9 0.2 6.7e-12 45.0 0.2 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 AID27872.1 - 1.2e-10 41.8 1.3 2.1e-10 41.0 0.7 1.7 1 1 0 1 1 1 1 MerR, DNA binding TraF_2 PF13729.6 AID27872.1 - 0.031 13.6 0.1 0.1 12.0 0.0 1.7 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein DUF677 PF05055.12 AID27872.1 - 0.15 10.9 0.4 1.9 7.3 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF677) Acyl-CoA_dh_C PF12806.7 AID27873.1 - 8.5e-40 135.8 1.2 1.7e-39 134.8 1.2 1.5 1 0 0 1 1 1 1 Acetyl-CoA dehydrogenase C-terminal like Acyl-CoA_dh_1 PF00441.24 AID27873.1 - 1.3e-17 64.4 1.5 1.8e-16 60.7 1.5 2.4 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 AID27873.1 - 1.5e-16 61.0 0.2 4.7e-16 59.4 0.2 1.9 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 AID27873.1 - 6.6e-16 58.3 0.0 3.1e-15 56.1 0.0 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain AcylCoA_DH_N PF12418.8 AID27873.1 - 5.8e-12 45.4 0.0 1.1e-11 44.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase N terminal Acyl-CoA_dh_2 PF08028.11 AID27873.1 - 0.016 15.5 0.2 0.036 14.3 0.2 1.7 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 AID27873.1 - 0.053 14.1 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal SAND PF01342.21 AID27873.1 - 0.14 11.8 0.0 0.43 10.3 0.0 1.8 1 0 0 1 1 1 0 SAND domain Acyl-CoA_dh_1 PF00441.24 AID27874.1 - 2.3e-44 151.2 0.1 3.2e-44 150.7 0.1 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 AID27874.1 - 8.5e-30 103.7 0.1 1.3e-29 103.1 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 AID27874.1 - 1.2e-25 89.5 0.1 1.9e-25 88.8 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 AID27874.1 - 1.8e-16 60.6 0.0 2.8e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 AID27874.1 - 8.5e-05 23.1 0.0 0.00014 22.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Thiolase_N PF00108.23 AID27875.1 - 1.7e-52 178.4 0.0 1.4e-47 162.3 0.0 2.7 2 1 0 2 2 2 2 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID27875.1 - 4.3e-43 145.9 0.0 8.3e-43 144.9 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 AID27875.1 - 4.4e-05 23.2 0.3 0.0001 22.0 0.3 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 AID27875.1 - 0.013 15.6 0.0 0.05 13.8 0.0 2.0 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 3HCDH_N PF02737.18 AID27876.1 - 1.1e-59 201.3 0.6 2.7e-59 200.1 0.6 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 AID27876.1 - 1.1e-30 106.8 0.5 3.8e-30 105.0 0.5 1.9 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 AID27876.1 - 1.2e-30 106.0 1.6 7.2e-24 84.2 0.1 4.2 3 1 1 4 4 4 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 AID27876.1 - 5.1e-19 68.9 0.1 1e-18 67.9 0.1 1.5 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 AID27876.1 - 6.9e-05 23.1 0.0 0.00018 21.7 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DAO PF01266.24 AID27876.1 - 0.0008 19.1 0.0 0.0015 18.2 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase F420_oxidored PF03807.17 AID27876.1 - 0.00099 19.6 0.3 0.003 18.1 0.3 2.0 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 AID27876.1 - 0.011 15.4 0.0 0.02 14.6 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 AID27876.1 - 0.012 15.2 0.3 0.022 14.3 0.3 1.6 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 AID27876.1 - 0.018 14.4 0.1 0.052 12.9 0.0 1.7 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 AID27876.1 - 0.02 15.1 0.1 0.24 11.7 0.1 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Sacchrp_dh_NADP PF03435.18 AID27876.1 - 0.038 14.2 0.1 0.088 13.1 0.1 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 AID27876.1 - 0.054 13.5 0.0 0.14 12.1 0.0 1.8 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.19 AID27876.1 - 0.11 11.7 0.1 0.2 10.9 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain 4HBT_2 PF13279.6 AID27877.1 - 3.2e-20 72.9 0.0 4.3e-20 72.4 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 AID27877.1 - 0.0062 15.8 0.0 0.02 14.2 0.0 1.7 2 0 0 2 2 2 1 Acyl-ACP thioesterase Peptidase_S24 PF00717.23 AID27878.1 - 2.8e-12 46.4 0.2 3.8e-12 46.0 0.2 1.2 1 0 0 1 1 1 1 Peptidase S24-like Myosin_N PF02736.19 AID27878.1 - 0.084 12.7 0.2 0.18 11.6 0.2 1.6 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain DUF2848 PF11010.8 AID27878.1 - 0.13 11.8 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2848) tRNA-synt_1f PF01921.18 AID27880.1 - 3.6e-131 437.4 0.0 4.5e-131 437.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 AID27880.1 - 0.00074 18.4 0.0 0.001 17.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1b PF00579.25 AID27880.1 - 0.0068 15.8 0.0 0.05 12.9 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (W and Y) tRNA-synt_1 PF00133.22 AID27880.1 - 0.034 12.4 0.0 0.05 11.8 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 AID27880.1 - 0.057 12.7 0.0 0.095 12.0 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1c PF00749.21 AID27880.1 - 0.096 11.6 0.0 0.32 9.9 0.0 1.8 3 0 0 3 3 3 0 tRNA synthetases class I (E and Q), catalytic domain TerB PF05099.13 AID27881.1 - 4.6e-09 36.4 1.4 5.3e-09 36.2 1.4 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TerB SBP_bac_3 PF00497.20 AID27882.1 - 9.9e-46 156.0 0.0 1.1e-45 155.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Autoind_bind PF03472.15 AID27883.1 - 7.1e-28 97.0 0.0 1.1e-27 96.4 0.0 1.3 1 1 0 1 1 1 1 Autoinducer binding domain GerE PF00196.19 AID27883.1 - 3.8e-17 61.6 0.1 6.7e-17 60.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID27883.1 - 1.1e-05 25.0 0.0 2.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_10 PF04967.12 AID27883.1 - 0.0001 22.0 0.9 0.0036 17.1 0.1 2.9 3 0 0 3 3 3 1 HTH DNA binding domain HTH_23 PF13384.6 AID27883.1 - 0.02 14.7 0.9 0.042 13.6 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.16 AID27883.1 - 0.022 14.3 0.0 0.08 12.5 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 Autoind_synth PF00765.17 AID27884.1 - 2e-17 63.4 0.0 2.4e-17 63.1 0.0 1.2 1 0 0 1 1 1 1 Autoinducer synthase Acetyltransf_5 PF13444.6 AID27884.1 - 4.1e-13 49.9 0.0 6.3e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID27884.1 - 0.05 13.8 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family ECH_1 PF00378.20 AID27885.1 - 8.5e-35 120.3 0.0 1e-34 120.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID27885.1 - 4.8e-22 78.9 0.0 5.7e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PPK2 PF03976.14 AID27886.1 - 3.5e-105 350.6 0.2 4.1e-105 350.3 0.2 1.0 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) HATPase_c PF02518.26 AID27887.1 - 7.9e-24 84.3 0.1 1.5e-23 83.5 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID27887.1 - 4.5e-17 61.8 0.4 1e-16 60.7 0.4 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AID27887.1 - 0.0077 16.2 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 AID27887.1 - 0.0082 16.0 0.2 0.084 12.8 0.2 2.1 1 1 0 1 1 1 1 GHKL domain PAS_8 PF13188.7 AID27887.1 - 0.095 12.8 0.0 0.37 10.9 0.0 2.1 1 0 0 1 1 1 0 PAS domain Med22 PF06179.12 AID27887.1 - 0.12 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Surfeit locus protein 5 subunit 22 of Mediator complex PhoU PF01895.19 AID27888.1 - 2e-39 133.9 6.0 4.3e-21 75.2 0.8 2.1 2 0 0 2 2 2 2 PhoU domain DUF489 PF04356.12 AID27888.1 - 0.06 13.4 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) CorA PF01544.18 AID27889.1 - 2.1e-58 197.9 0.0 2.4e-58 197.7 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein GcrA PF07750.11 AID27890.1 - 5.2e-72 241.6 1.1 6e-72 241.4 1.1 1.0 1 0 0 1 1 1 1 GcrA cell cycle regulator HTH_23 PF13384.6 AID27890.1 - 0.012 15.4 0.1 0.026 14.3 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 AID27890.1 - 0.02 14.7 0.0 0.055 13.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID27890.1 - 0.088 12.8 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 HTH domain Aminotran_3 PF00202.21 AID27891.1 - 2.3e-115 385.5 0.0 3.1e-115 385.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 AID27891.1 - 0.0011 18.3 0.0 0.0032 16.8 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 AID27891.1 - 0.0018 17.3 0.0 0.0075 15.3 0.0 2.0 2 1 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AID27891.1 - 0.012 14.9 0.0 0.026 13.9 0.0 1.6 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 AID27891.1 - 0.023 13.9 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class I and II OTCace PF00185.24 AID27892.1 - 8.7e-53 178.6 0.0 1.6e-52 177.8 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 AID27892.1 - 8.9e-48 162.1 0.1 1.5e-47 161.4 0.1 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TOC159_MAD PF11886.8 AID27892.1 - 0.01 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 0 Translocase of chloroplast 159/132, membrane anchor domain HSP33 PF01430.19 AID27893.1 - 9.7e-74 248.1 0.0 1.1e-73 247.9 0.0 1.0 1 0 0 1 1 1 1 Hsp33 protein DUF525 PF04379.14 AID27894.1 - 3.9e-35 119.9 0.0 4.8e-35 119.7 0.0 1.1 1 0 0 1 1 1 1 ApaG domain Glyco_transf_21 PF13506.6 AID27896.1 - 3.7e-60 202.3 0.1 5.2e-60 201.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 AID27896.1 - 1.6e-14 54.4 0.0 2.3e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 AID27896.1 - 2.8e-09 37.2 0.5 4e-09 36.7 0.5 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 AID27896.1 - 4.5e-06 26.6 0.0 1.6e-05 24.8 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferase family 2 Cys_Met_Meta_PP PF01053.20 AID27897.1 - 3.3e-129 430.7 0.0 3.8e-129 430.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID27897.1 - 1.9e-05 24.0 0.0 2.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID27897.1 - 3.4e-05 23.3 0.6 0.00013 21.4 0.5 1.8 1 1 1 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AID27897.1 - 0.0011 18.0 0.1 0.0018 17.3 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Met_gamma_lyase PF06838.11 AID27897.1 - 0.0046 15.5 0.0 0.038 12.5 0.0 1.9 1 1 0 1 1 1 1 Methionine gamma-lyase DCD PF06559.11 AID27899.1 - 4.1e-175 581.8 0.0 4.6e-175 581.6 0.0 1.0 1 0 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 AID27899.1 - 0.0076 15.9 0.0 0.11 12.2 0.0 2.5 3 1 0 3 3 3 1 dUTPase SBP_bac_3 PF00497.20 AID27900.1 - 1.8e-72 243.5 2.6 2.1e-72 243.2 2.6 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID27900.1 - 3.4e-09 36.9 0.2 3.4e-08 33.7 0.0 2.5 2 1 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site LysR_substrate PF03466.20 AID27900.1 - 0.022 14.1 0.0 0.063 12.6 0.0 1.7 2 0 0 2 2 2 0 LysR substrate binding domain BPD_transp_2 PF02653.16 AID27903.1 - 5.4e-39 134.0 50.8 2.7e-38 131.7 47.0 2.6 2 1 0 2 2 2 1 Branched-chain amino acid transport system / permease component Flp_Fap PF04964.14 AID27903.1 - 0.12 12.2 0.1 0.12 12.2 0.1 3.1 3 0 0 3 3 3 0 Flp/Fap pilin component FeoB_associated PF12669.7 AID27903.1 - 1.7 9.1 0.0 1.7 9.1 0.0 5.3 7 0 0 7 7 7 0 FeoB-associated Cys-rich membrane protein ABC_tran PF00005.27 AID27904.1 - 9.3e-50 168.7 0.5 3.5e-30 105.3 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID27904.1 - 3.2e-08 33.7 0.1 0.0062 16.4 0.0 3.1 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID27904.1 - 8.5e-05 22.1 1.5 0.0021 17.5 1.5 2.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID27904.1 - 0.00086 19.5 0.5 3.2 8.1 0.2 3.0 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 AID27904.1 - 0.0024 17.6 0.3 0.11 12.2 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_29 PF13555.6 AID27904.1 - 0.0054 16.4 2.5 0.0083 15.8 0.0 2.6 3 1 0 3 3 3 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID27904.1 - 0.013 15.3 0.2 0.026 14.3 0.2 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 AID27904.1 - 0.014 15.0 0.1 0.03 13.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID27904.1 - 0.015 15.8 0.1 0.04 14.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID27904.1 - 0.016 15.1 2.2 0.088 12.7 0.2 2.7 2 1 1 3 3 3 0 RsgA GTPase AAA_22 PF13401.6 AID27904.1 - 0.021 15.1 0.6 0.77 10.0 0.0 2.7 3 0 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 AID27904.1 - 0.021 14.9 0.2 0.44 10.7 0.0 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID27904.1 - 0.031 14.8 0.2 11 6.6 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_25 PF13481.6 AID27904.1 - 0.034 13.7 0.0 3.2 7.3 0.0 3.1 3 0 0 3 3 3 0 AAA domain TsaE PF02367.17 AID27904.1 - 0.058 13.4 0.5 27 4.8 0.0 3.1 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_10 PF12846.7 AID27904.1 - 0.071 12.0 1.7 2.2 7.1 0.1 2.4 2 0 0 2 2 2 0 AAA-like domain ABC_ATPase PF09818.9 AID27904.1 - 0.081 11.7 2.8 0.44 9.3 0.1 2.9 3 1 0 3 3 3 0 Predicted ATPase of the ABC class AAA_16 PF13191.6 AID27904.1 - 0.3 11.5 1.6 3.3 8.0 0.8 2.8 2 1 0 2 2 2 0 AAA ATPase domain Peripla_BP_4 PF13407.6 AID27905.1 - 7.1e-64 215.8 1.9 9.7e-64 215.4 1.9 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID27905.1 - 8.8e-05 22.1 0.1 0.00013 21.5 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LysR_substrate PF03466.20 AID27906.1 - 6.9e-29 100.7 0.8 9.7e-29 100.2 0.8 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID27906.1 - 1.5e-18 66.5 0.0 5.2e-18 64.7 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID27906.1 - 0.00027 20.8 0.1 0.00062 19.6 0.1 1.6 1 0 0 1 1 1 1 MarR family VWA PF00092.28 AID27908.1 - 0.033 14.4 0.1 0.083 13.1 0.0 1.6 2 0 0 2 2 2 0 von Willebrand factor type A domain STAS PF01740.21 AID27908.1 - 0.11 12.1 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 STAS domain Acyl_transf_3 PF01757.22 AID27909.1 - 1e-16 60.9 20.9 1.6e-16 60.3 20.9 1.3 1 0 0 1 1 1 1 Acyltransferase family SBF2 PF12335.8 AID27909.1 - 0.56 9.8 3.6 3.2 7.3 0.3 2.1 1 1 1 2 2 2 0 Myotubularin protein Glycos_transf_2 PF00535.26 AID27911.1 - 1.9e-32 112.5 0.0 2.9e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID27911.1 - 7.3e-10 39.1 0.0 1e-09 38.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 AID27911.1 - 0.00032 20.2 0.0 0.00057 19.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 AID27911.1 - 0.02 14.4 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF4395 PF14340.6 AID27911.1 - 0.079 13.3 0.7 2.8 8.3 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4395) HATPase_c PF02518.26 AID27912.1 - 7.4e-19 68.3 0.3 4e-18 65.9 0.0 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID27912.1 - 3.1e-08 33.5 4.1 1.2e-07 31.6 4.2 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID27912.1 - 0.0013 18.6 0.0 0.0025 17.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID27912.1 - 0.016 15.6 0.2 0.016 15.6 0.2 2.5 3 0 0 3 3 3 0 HAMP domain HATPase_c_2 PF13581.6 AID27912.1 - 0.026 14.5 0.0 0.083 12.8 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF5527 PF17665.1 AID27912.1 - 0.5 9.9 2.5 1.9 8.0 0.5 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5527) MHYT PF03707.16 AID27912.1 - 4.9 7.4 6.7 12 6.2 1.1 2.7 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat Response_reg PF00072.24 AID27913.1 - 3.8e-22 78.6 0.2 6e-22 77.9 0.2 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID27913.1 - 8.2e-18 64.3 0.1 1.4e-17 63.6 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Hva1_TUDOR PF11160.8 AID27914.1 - 0.047 13.9 1.0 0.072 13.3 1.0 1.3 1 0 0 1 1 1 0 Hypervirulence associated proteins TUDOR domain OMP_b-brl PF13505.6 AID27915.1 - 2.5e-14 53.8 7.2 2.9e-14 53.6 7.2 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 AID27915.1 - 1.7e-05 24.7 2.5 2.1e-05 24.3 2.5 1.1 1 0 0 1 1 1 1 OmpA-like transmembrane domain MtrE PF04206.12 AID27916.1 - 0.019 14.3 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E Hist_deacetyl PF00850.19 AID27917.1 - 1.8e-45 155.7 0.0 2.8e-45 155.1 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain MatE PF01554.18 AID27918.1 - 2.3e-27 95.6 34.3 1.1e-13 51.1 11.2 2.3 2 0 0 2 2 2 2 MatE DHO_dh PF01180.21 AID27919.1 - 2.2e-89 299.6 0.0 2.7e-89 299.3 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DUF952 PF06108.12 AID27920.1 - 8.9e-30 102.5 0.0 1.1e-29 102.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF952) HOOK PF05622.12 AID27921.1 - 0.0034 15.6 0.4 0.0036 15.5 0.4 1.0 1 0 0 1 1 1 1 HOOK protein SlyX PF04102.12 AID27921.1 - 0.01 16.5 0.3 0.031 14.9 0.4 1.8 1 1 0 2 2 2 1 SlyX ERF PF04404.12 AID27921.1 - 0.011 15.6 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 0 ERF superfamily CLZ PF16526.5 AID27921.1 - 0.016 15.5 0.1 0.031 14.7 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF2205 PF10224.9 AID27921.1 - 0.022 14.8 0.6 0.039 13.9 0.6 1.5 1 1 0 1 1 1 0 Short coiled-coil protein Dehydratase_hem PF13816.6 AID27921.1 - 0.027 13.9 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Haem-containing dehydratase DUF2730 PF10805.8 AID27921.1 - 0.031 14.4 0.1 0.054 13.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF4349 PF14257.6 AID27921.1 - 0.034 13.6 0.3 0.17 11.3 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) JIP_LZII PF16471.5 AID27921.1 - 0.053 13.7 0.2 0.097 12.9 0.2 1.4 1 0 0 1 1 1 0 JNK-interacting protein leucine zipper II PRP8_domainIV PF12134.8 AID27921.1 - 0.054 13.1 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 PRP8 domain IV core Sipho_Gp157 PF05565.11 AID27921.1 - 0.074 13.1 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 Siphovirus Gp157 JmjN PF02375.17 AID27921.1 - 0.26 11.3 0.6 0.57 10.2 0.6 1.7 1 1 0 1 1 1 0 jmjN domain Response_reg PF00072.24 AID27922.1 - 8.6e-24 83.9 0.0 2.1e-23 82.6 0.0 1.6 2 0 0 2 2 2 1 Response regulator receiver domain GerE PF00196.19 AID27922.1 - 5.2e-20 70.7 0.1 8.4e-20 70.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID27922.1 - 2.4e-06 27.1 0.2 5.6e-06 25.9 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID27922.1 - 0.00022 21.2 0.0 0.00028 20.8 0.0 1.2 1 0 0 1 1 1 1 ECF sigma factor HTH_10 PF04967.12 AID27922.1 - 0.00042 20.0 1.3 0.059 13.2 0.1 2.8 3 0 0 3 3 3 1 HTH DNA binding domain Sigma70_r4 PF04545.16 AID27922.1 - 0.0015 18.0 0.2 0.0046 16.5 0.2 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_7 PF02796.15 AID27922.1 - 0.0069 16.4 0.0 0.019 15.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_40 PF14493.6 AID27922.1 - 0.0084 16.5 0.1 0.044 14.2 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID27922.1 - 0.0096 15.7 0.0 0.058 13.2 0.0 2.2 1 1 1 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 AID27922.1 - 0.012 15.7 0.0 0.081 13.0 0.0 2.4 2 1 0 2 2 2 0 Winged helix-turn helix DUF2089 PF09862.9 AID27922.1 - 0.018 15.1 0.0 0.042 13.9 0.0 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF2089) MarR_2 PF12802.7 AID27922.1 - 0.021 14.7 0.2 0.33 10.9 0.1 2.7 1 1 1 2 2 2 0 MarR family HTH_20 PF12840.7 AID27922.1 - 0.042 13.9 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID27922.1 - 0.055 13.4 0.1 0.14 12.1 0.1 1.7 1 0 0 1 1 1 0 HTH domain HTH_38 PF13936.6 AID27922.1 - 0.076 12.8 0.0 0.37 10.6 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Trp_repressor PF01371.19 AID27922.1 - 0.085 13.0 0.1 0.18 11.9 0.1 1.5 1 1 0 1 1 1 0 Trp repressor protein HTH_5 PF01022.20 AID27922.1 - 0.11 12.4 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Phasin PF05597.11 AID27922.1 - 0.12 12.4 0.4 17 5.5 0.0 2.6 3 0 0 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) MFS_1 PF07690.16 AID27923.1 - 3.4e-46 157.8 39.5 3.4e-46 157.8 39.5 1.6 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID27923.1 - 8.6e-07 28.2 6.5 8.6e-07 28.2 6.5 2.9 2 1 0 3 3 3 1 Sugar (and other) transporter MFS_4 PF06779.14 AID27923.1 - 1.2e-06 28.1 7.2 1.2e-06 28.1 7.2 2.6 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB TRI12 PF06609.13 AID27923.1 - 3.7e-05 22.4 8.7 6.3e-05 21.6 8.7 1.3 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_1_like PF12832.7 AID27923.1 - 0.0043 16.0 7.3 0.0043 16.0 7.3 2.5 3 0 0 3 3 3 1 MFS_1 like family DUF1970 PF09301.10 AID27923.1 - 0.15 12.3 2.0 0.92 9.8 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1970) LysR_substrate PF03466.20 AID27924.1 - 1e-19 70.8 4.4 1.5e-19 70.2 4.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID27924.1 - 7.7e-17 61.0 1.4 7.7e-17 61.0 1.4 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MFS_1 PF07690.16 AID27925.1 - 8.4e-42 143.4 39.3 8.4e-42 143.4 39.3 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_1_like PF12832.7 AID27925.1 - 2.3e-08 33.3 8.6 1.9e-07 30.3 8.6 2.2 1 1 0 1 1 1 1 MFS_1 like family LacY_symp PF01306.19 AID27925.1 - 4.2e-05 22.5 3.0 0.00011 21.1 2.6 1.9 1 1 1 2 2 2 1 LacY proton/sugar symporter MFS_2 PF13347.6 AID27925.1 - 0.00014 20.6 14.4 0.00036 19.2 14.4 1.7 1 1 0 1 1 1 1 MFS/sugar transport protein DUF2850 PF11012.8 AID27925.1 - 0.083 13.2 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2850) Sugar_tr PF00083.24 AID27925.1 - 1.5 7.6 20.4 0.036 12.9 10.4 2.5 2 1 0 2 2 2 0 Sugar (and other) transporter Methyltransf_24 PF13578.6 AID27926.1 - 2.1e-16 60.8 0.0 3.9e-16 60.0 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_3 PF01596.17 AID27926.1 - 1.4e-10 40.8 0.0 1.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase GCD14 PF08704.10 AID27926.1 - 0.035 13.8 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit IstB_IS21_ATP PF08483.11 AID27926.1 - 0.078 12.9 0.0 0.19 11.6 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding N-terminal CmcI PF04989.12 AID27926.1 - 0.095 12.4 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase TetR_C_18 PF17923.1 AID27928.1 - 8e-51 171.3 3.0 1.1e-50 170.9 3.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID27928.1 - 4.4e-11 42.4 0.1 8.7e-11 41.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 AID27928.1 - 3.9e-08 34.0 5.5 7.8e-08 33.0 4.9 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain Spore_SspJ PF09575.10 AID27928.1 - 0.13 12.6 0.2 1.2 9.6 0.0 2.2 2 0 0 2 2 2 0 Small spore protein J (Spore_SspJ) PAS_7 PF12860.7 AID27929.1 - 4.5e-33 113.8 0.0 1e-32 112.7 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 AID27929.1 - 1.1e-21 77.4 0.1 2.7e-21 76.1 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID27929.1 - 8.4e-11 42.0 0.0 1.9e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HisKA PF00512.25 AID27929.1 - 2.1e-06 27.6 0.3 8.9e-06 25.6 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 AID27929.1 - 0.00024 21.3 0.2 0.00066 19.9 0.0 1.9 2 0 0 2 2 2 1 PAS fold HAMP PF00672.25 AID27929.1 - 0.33 11.4 0.0 0.33 11.4 0.0 3.1 3 0 0 3 3 3 0 HAMP domain DUF3165 PF11364.8 AID27929.1 - 3 8.3 5.3 5.4 7.4 0.2 3.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3165) DASH_Dam1 PF08653.10 AID27929.1 - 6.7 6.6 5.8 68 3.4 0.1 3.6 3 0 0 3 3 3 0 DASH complex subunit Dam1 MscL PF01741.18 AID27931.1 - 7.4e-44 148.9 0.9 8.4e-44 148.8 0.9 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Bac_export_2 PF01312.19 AID27931.1 - 0.06 12.5 0.1 0.17 11.1 0.0 1.7 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family DUF3487 PF11990.8 AID27931.1 - 0.11 12.3 1.4 7.9 6.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Aminotran_1_2 PF00155.21 AID27932.1 - 1.1e-58 199.2 0.0 1.3e-58 198.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID27932.1 - 1.5e-14 54.1 0.0 2.4e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 AID27932.1 - 2.6e-10 39.4 0.0 5.3e-10 38.4 0.0 1.5 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID27932.1 - 8e-06 25.0 0.0 1.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_MocR PF12897.7 AID27932.1 - 0.00032 19.6 0.1 0.00052 18.9 0.1 1.3 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 AID27932.1 - 0.0011 18.3 0.0 0.0018 17.6 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Alliinase_C PF04864.13 AID27932.1 - 0.047 12.6 0.0 0.071 12.0 0.0 1.2 1 0 0 1 1 1 0 Allinase Aminotran_1_2 PF00155.21 AID27933.1 - 7.6e-73 245.8 0.0 8.7e-73 245.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AID27933.1 - 2.1e-06 26.5 0.0 3e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID27933.1 - 2.9e-06 26.5 0.0 4.5e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AID27933.1 - 6.2e-05 22.4 0.2 0.00013 21.4 0.0 1.5 2 0 0 2 2 2 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AID27933.1 - 0.055 12.8 0.0 0.099 11.9 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Epimerase PF01370.21 AID27934.1 - 1.3e-53 181.9 0.0 1.6e-53 181.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID27934.1 - 2.2e-47 162.1 0.0 3.4e-47 161.5 0.0 1.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID27934.1 - 1.4e-16 60.3 0.0 2.7e-15 56.1 0.0 2.0 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID27934.1 - 1.7e-15 56.9 0.0 2.3e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID27934.1 - 2.2e-14 53.3 0.0 2e-13 50.1 0.0 2.3 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID27934.1 - 3.4e-11 42.8 0.0 2e-08 33.7 0.0 2.5 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 AID27934.1 - 4.9e-09 36.1 0.1 7.8e-09 35.4 0.1 1.3 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID27934.1 - 5.8e-09 36.1 0.1 1.3e-08 34.9 0.0 1.7 2 1 0 2 2 2 1 NAD(P)H-binding adh_short PF00106.25 AID27934.1 - 0.0015 18.0 0.1 0.0025 17.3 0.1 1.4 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 AID27934.1 - 0.016 15.5 0.1 0.025 14.8 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain KR PF08659.10 AID27934.1 - 0.044 13.7 2.8 0.37 10.7 2.8 2.5 1 1 0 1 1 1 0 KR domain NAD_binding_2 PF03446.15 AID27934.1 - 0.16 12.1 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase DAO PF01266.24 AID27935.1 - 8.7e-65 219.6 0.6 9.9e-65 219.4 0.6 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID27935.1 - 1.2e-09 37.8 0.1 0.00026 20.3 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID27935.1 - 5.2e-08 33.3 0.4 0.00032 21.2 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID27935.1 - 4.3e-07 29.4 0.1 0.0002 20.7 0.1 2.2 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 AID27935.1 - 5.2e-07 29.8 0.2 1.3e-06 28.5 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID27935.1 - 1.2e-05 24.2 0.3 0.11 11.2 0.3 2.6 3 0 0 3 3 3 2 HI0933-like protein Amino_oxidase PF01593.24 AID27935.1 - 7.4e-05 22.2 0.2 0.013 14.8 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase ApbA PF02558.16 AID27935.1 - 9.8e-05 22.0 0.1 0.0002 21.0 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 AID27935.1 - 0.00031 20.8 0.2 0.11 12.4 0.0 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding 3HCDH_N PF02737.18 AID27935.1 - 0.00058 19.8 0.2 0.00097 19.1 0.2 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 AID27935.1 - 0.0013 18.3 0.3 0.0026 17.4 0.3 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID27935.1 - 0.0024 17.8 0.0 0.0061 16.5 0.0 1.6 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.19 AID27935.1 - 0.0026 17.0 0.2 0.066 12.4 0.2 2.1 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 AID27935.1 - 0.0045 16.1 0.6 0.064 12.3 0.5 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID27935.1 - 0.0049 16.2 0.4 0.0088 15.4 0.4 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 AID27935.1 - 0.022 14.1 0.2 0.26 10.6 0.3 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 AID27935.1 - 0.045 14.0 0.0 0.094 13.0 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 AID27935.1 - 0.054 14.1 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Trp_halogenase PF04820.14 AID27935.1 - 0.058 12.2 0.9 1 8.1 0.3 2.1 2 0 0 2 2 2 0 Tryptophan halogenase FAD_binding_2 PF00890.24 AID27935.1 - 0.061 12.4 1.5 0.55 9.2 1.0 2.1 2 0 0 2 2 2 0 FAD binding domain Glyco_transf_4 PF13439.6 AID27935.1 - 0.078 13.0 0.1 0.17 11.9 0.1 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 TrkA_N PF02254.18 AID27935.1 - 0.11 12.8 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain Ala_racemase_N PF01168.20 AID27936.1 - 9.3e-24 84.3 0.0 1.8e-23 83.3 0.0 1.5 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Arginase PF00491.21 AID27936.1 - 6.1e-15 55.5 0.2 1.2e-14 54.4 0.2 1.4 1 1 0 1 1 1 1 Arginase family FGGY_N PF00370.21 AID27937.1 - 2.8e-15 56.5 0.0 9.2e-15 54.9 0.0 1.7 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain PKS_DE PF18369.1 AID27937.1 - 0.03 14.9 0.2 0.18 12.4 0.2 2.3 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain FGGY_C PF02782.16 AID27937.1 - 0.041 13.6 0.3 0.041 13.6 0.3 2.0 3 0 0 3 3 3 0 FGGY family of carbohydrate kinases, C-terminal domain DUF4347 PF14252.6 AID27937.1 - 0.13 12.1 0.1 5.3 6.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4347) Hexokinase_1 PF00349.21 AID27937.1 - 0.26 11.2 0.0 0.38 10.6 0.0 1.2 1 0 0 1 1 1 0 Hexokinase rhaM PF05336.13 AID27938.1 - 7.2e-30 103.2 0.3 8e-30 103.1 0.3 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase BPD_transp_2 PF02653.16 AID27939.1 - 4.3e-48 163.8 46.3 4.3e-48 163.8 46.3 1.7 1 1 0 2 2 2 1 Branched-chain amino acid transport system / permease component TraL PF07178.11 AID27939.1 - 2 9.0 0.0 2 9.0 0.0 5.9 4 2 3 7 7 7 0 TraL protein BPD_transp_2 PF02653.16 AID27940.1 - 5.2e-45 153.7 42.6 5.2e-45 153.7 42.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID27941.1 - 6e-52 175.8 0.1 1.8e-27 96.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID27941.1 - 2.3e-08 34.2 0.8 0.0012 18.7 0.1 3.5 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID27941.1 - 2.8e-05 24.1 0.3 0.0082 16.1 0.1 2.6 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 AID27941.1 - 0.00012 21.7 0.5 0.0017 18.0 0.1 2.6 3 0 0 3 3 2 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID27941.1 - 0.0016 18.2 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID27941.1 - 0.002 18.7 1.1 0.0032 18.0 0.1 1.7 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 AID27941.1 - 0.008 15.6 3.2 0.35 10.3 0.1 3.1 2 2 1 3 3 3 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID27941.1 - 0.027 14.7 0.4 2.5 8.4 0.0 3.1 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit ATPase PF06745.13 AID27941.1 - 0.029 13.7 0.9 0.17 11.2 0.9 2.1 1 1 0 1 1 1 0 KaiC AAA_16 PF13191.6 AID27941.1 - 0.029 14.8 0.2 0.33 11.3 0.0 2.5 3 0 0 3 3 3 0 AAA ATPase domain TsaE PF02367.17 AID27941.1 - 0.029 14.4 0.4 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF2813 PF11398.8 AID27941.1 - 0.033 13.5 0.0 0.053 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_22 PF13401.6 AID27941.1 - 0.047 14.0 4.8 0.19 12.0 1.4 3.2 2 2 0 2 2 2 0 AAA domain DUF815 PF05673.13 AID27941.1 - 0.051 12.7 0.1 0.17 11.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_30 PF13604.6 AID27941.1 - 0.059 13.1 8.8 0.29 10.8 1.9 3.4 3 1 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 AID27941.1 - 0.07 13.5 0.2 0.27 11.6 0.0 2.0 2 0 0 2 2 2 0 RNA helicase MMR_HSR1 PF01926.23 AID27941.1 - 0.11 12.6 1.8 0.71 10.0 0.5 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 AID27941.1 - 0.15 11.8 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 AID27941.1 - 0.55 9.0 5.1 4.9 5.8 0.1 2.6 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA PF00004.29 AID27941.1 - 1.2 9.6 4.3 17 5.8 0.0 3.6 4 1 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) Peripla_BP_4 PF13407.6 AID27942.1 - 1.7e-61 208.1 9.7 2.1e-61 207.7 9.7 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID27942.1 - 2.5e-07 30.4 0.6 6e-07 29.2 0.6 1.5 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family NYN_YacP PF05991.11 AID27942.1 - 0.092 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 YacP-like NYN domain DeoRC PF00455.22 AID27943.1 - 1.4e-39 135.6 0.0 1.9e-39 135.2 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID27943.1 - 1.9e-12 46.7 0.1 4e-12 45.7 0.1 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID27943.1 - 0.0026 17.7 0.2 0.0072 16.2 0.2 1.8 1 0 0 1 1 1 1 HTH domain adh_short_C2 PF13561.6 AID27944.1 - 7.6e-50 169.6 3.2 1.8e-49 168.4 3.2 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID27944.1 - 3.3e-45 154.0 1.9 1.3e-44 152.1 0.9 2.0 2 0 0 2 2 2 1 short chain dehydrogenase Aldolase_II PF00596.21 AID27944.1 - 7e-20 71.7 0.0 2.7e-19 69.8 0.0 1.9 2 0 0 2 2 2 1 Class II Aldolase and Adducin N-terminal domain KR PF08659.10 AID27944.1 - 1e-07 32.0 0.7 2.4e-07 30.9 0.7 1.5 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID27944.1 - 9.4e-05 22.0 0.4 0.0079 15.7 0.0 2.7 3 0 0 3 3 3 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 AID27944.1 - 0.00066 18.9 0.0 0.0011 18.2 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 AID27944.1 - 0.0034 17.3 0.2 0.007 16.3 0.2 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID27944.1 - 0.035 14.4 0.1 0.092 13.0 0.1 1.7 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 AID27944.1 - 0.07 13.4 0.1 0.16 12.2 0.1 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 AID27944.1 - 0.11 11.8 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase MTS PF05175.14 AID27944.1 - 0.13 11.8 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain AP_endonuc_2 PF01261.24 AID27945.1 - 1.6e-05 24.5 0.4 7.2e-05 22.3 0.1 2.2 2 1 0 2 2 2 1 Xylose isomerase-like TIM barrel G_glu_transpept PF01019.21 AID27946.1 - 2.3e-179 597.5 0.0 2.6e-179 597.3 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Abhydrolase_3 PF07859.13 AID27950.1 - 6.2e-17 62.2 0.8 4e-16 59.5 0.8 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 AID27950.1 - 3e-10 39.6 0.0 4.3e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 Carboxylesterase family Chlorophyllase2 PF12740.7 AID27950.1 - 0.00022 20.2 0.0 0.00032 19.7 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_6 PF12697.7 AID27950.1 - 0.00077 20.1 0.6 0.0013 19.4 0.6 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID27950.1 - 0.0014 18.3 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Esterase_phd PF10503.9 AID27950.1 - 0.0082 15.7 0.0 0.038 13.5 0.0 2.1 2 0 0 2 2 2 1 Esterase PHB depolymerase Hydrolase_4 PF12146.8 AID27950.1 - 0.045 13.0 0.1 0.25 10.6 0.0 2.0 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID27950.1 - 0.05 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 Prolyl oligopeptidase family Lipase_3 PF01764.25 AID27950.1 - 0.072 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Aldedh PF00171.22 AID27951.1 - 2.7e-165 550.4 0.1 3e-165 550.2 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 AID27951.1 - 0.16 11.4 0.0 0.26 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) Fe-ADH PF00465.19 AID27952.1 - 1.1e-107 360.1 4.9 1.2e-107 359.9 4.9 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 AID27952.1 - 8.5e-11 42.0 1.6 0.00016 21.5 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase FCD PF07729.12 AID27953.1 - 2.4e-20 73.2 14.4 6.4e-20 71.8 14.6 1.6 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID27953.1 - 6.5e-14 51.3 0.2 1.5e-13 50.1 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 AID27953.1 - 0.0013 18.4 0.0 0.0066 16.2 0.0 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain MarR_2 PF12802.7 AID27953.1 - 0.0045 16.9 2.9 0.025 14.4 0.0 3.2 3 1 1 4 4 4 1 MarR family HTH_24 PF13412.6 AID27953.1 - 0.036 13.6 0.0 0.21 11.2 0.0 2.2 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 AID27953.1 - 0.069 13.1 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RepB PF07506.11 AID27953.1 - 0.12 12.4 3.4 0.26 11.4 3.1 1.5 1 1 0 1 1 1 0 RepB plasmid partitioning protein DJ-1_PfpI PF01965.24 AID27955.1 - 1.1e-34 119.6 0.2 1.3e-34 119.4 0.2 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 AID27955.1 - 0.00062 19.6 0.0 0.00073 19.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AID27955.1 - 0.0015 18.4 0.0 0.0032 17.3 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 ThiJ_like PF17124.5 AID27955.1 - 0.0019 17.9 0.0 0.0023 17.7 0.0 1.4 1 0 0 1 1 1 1 ThiJ/PfpI family-like GATase_3 PF07685.14 AID27955.1 - 0.013 15.1 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.6 AID27955.1 - 0.058 12.5 0.0 0.1 11.7 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF5353 PF17304.2 AID27957.1 - 0.092 12.5 0.3 0.25 11.1 0.3 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5353) ATPase_2 PF01637.18 AID27959.1 - 0.0019 18.1 0.8 0.0034 17.3 0.0 1.8 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 AID27959.1 - 0.0022 18.4 0.0 0.0051 17.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 AID27959.1 - 0.0055 17.2 0.1 0.018 15.6 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_7 PF12775.7 AID27959.1 - 0.0056 16.2 0.0 0.028 13.9 0.0 2.0 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 AID27959.1 - 0.075 12.6 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Phage_int_SAM_4 PF13495.6 AID27960.1 - 3.4e-05 24.2 0.0 6e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 AID27960.1 - 0.00082 19.6 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 AID27960.1 - 0.0044 17.3 0.0 0.0082 16.5 0.0 1.4 1 0 0 1 1 1 1 Phage integrase SAM-like domain HTH_18 PF12833.7 AID27961.1 - 1.4e-21 76.5 0.1 2.8e-21 75.5 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID27961.1 - 9.3e-13 47.9 0.0 3.4e-07 30.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 AID27961.1 - 1.7e-07 30.8 0.2 3.6e-07 29.8 0.1 1.6 2 0 0 2 2 2 1 Cupin domain AraC_binding PF02311.19 AID27961.1 - 0.00023 21.1 0.4 0.00039 20.3 0.4 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.7 AID27961.1 - 0.029 14.1 0.1 0.044 13.5 0.1 1.3 1 0 0 1 1 1 0 Cupin SBP_bac_1 PF01547.25 AID27962.1 - 5.8e-30 105.3 8.8 8.7e-30 104.7 8.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID27962.1 - 4.8e-29 102.0 5.7 7.1e-29 101.5 5.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID27963.1 - 2.9e-12 46.7 31.5 4.7e-11 42.8 31.5 2.1 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID27964.1 - 5.4e-18 65.4 21.6 5.4e-18 65.4 21.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID27965.1 - 1.6e-31 109.7 0.0 2.4e-31 109.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID27965.1 - 1.4e-12 48.2 0.2 5.6e-12 46.3 0.1 2.1 2 0 0 2 2 1 1 MalK OB fold domain AAA_21 PF13304.6 AID27965.1 - 6.2e-07 29.5 0.1 0.0035 17.2 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 AID27965.1 - 1.2e-06 28.6 2.5 0.00019 21.6 0.4 2.7 1 1 1 2 2 2 2 TOBE domain SMC_N PF02463.19 AID27965.1 - 3.1e-05 23.5 0.1 0.019 14.4 0.1 3.2 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID27965.1 - 0.00016 21.7 0.1 0.00032 20.6 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID27965.1 - 0.00038 21.0 0.0 0.00062 20.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID27965.1 - 0.00096 18.8 0.0 0.0023 17.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID27965.1 - 0.0016 18.8 0.1 0.0048 17.3 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID27965.1 - 0.0043 17.3 0.1 0.011 16.0 0.1 1.7 1 0 0 1 1 1 1 AAA domain MIT_C PF16565.5 AID27965.1 - 0.0049 16.9 0.0 0.008 16.2 0.0 1.3 1 0 0 1 1 1 1 Phospholipase D-like domain at C-terminus of MIT AAA_30 PF13604.6 AID27965.1 - 0.014 15.1 0.4 0.28 10.9 0.0 2.5 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 AID27965.1 - 0.016 15.4 0.1 0.044 14.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA PF00004.29 AID27965.1 - 0.022 15.2 0.1 0.07 13.6 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 AID27965.1 - 0.023 14.4 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 AID27965.1 - 0.037 13.9 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 AID27965.1 - 0.048 13.9 0.1 0.11 12.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID27965.1 - 0.068 13.6 0.0 0.26 11.7 0.0 2.0 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.12 AID27965.1 - 0.078 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 AID27965.1 - 0.078 12.5 0.1 0.3 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain PEPCK_ATP PF01293.20 AID27965.1 - 0.09 11.4 0.1 1.2 7.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase CysA_C_terminal PF17850.1 AID27965.1 - 0.092 13.3 1.3 0.19 12.3 0.1 2.2 2 0 0 2 2 2 0 CysA C-terminal regulatory domain MMR_HSR1 PF01926.23 AID27965.1 - 0.1 12.7 0.1 0.23 11.5 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 AID27965.1 - 0.13 12.2 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 AID27965.1 - 0.29 10.8 0.9 2.3 7.9 0.1 2.4 3 0 0 3 3 2 0 IstB-like ATP binding protein Aldo_ket_red PF00248.21 AID27966.1 - 1.4e-42 145.9 0.0 2.5e-42 145.1 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family GFO_IDH_MocA PF01408.22 AID27966.1 - 1.4e-20 74.3 0.0 2.8e-20 73.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 AID27966.1 - 0.18 12.5 0.0 0.36 11.5 0.0 1.5 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID27966.1 - 0.2 12.3 0.3 0.73 10.4 0.0 2.1 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent HTH_18 PF12833.7 AID27967.1 - 2.1e-22 79.2 0.2 4.3e-22 78.2 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 AID27967.1 - 4.8e-22 78.3 0.1 7.6e-22 77.7 0.1 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_AraC PF00165.23 AID27967.1 - 1.1e-15 57.3 0.0 9.9e-10 38.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 AID27967.1 - 0.15 11.7 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Cupin domain Glyco_hydro_4C PF11975.8 AID27968.1 - 1.3e-47 162.5 0.0 2e-47 161.9 0.0 1.3 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Glyco_hydro_4 PF02056.16 AID27968.1 - 8.1e-45 152.6 0.2 1.1e-44 152.1 0.2 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase SBP_bac_5 PF00496.22 AID27969.1 - 1.8e-63 214.8 5.0 2.4e-63 214.4 5.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 AID27970.1 - 2.9e-25 89.1 18.9 4.2e-25 88.6 16.8 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID27971.1 - 2.2e-16 60.1 14.0 2.2e-16 60.1 14.0 2.0 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID27971.1 - 2.3e-12 46.7 1.0 2.3e-12 46.7 1.0 3.1 2 1 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 AID27972.1 - 1e-62 210.7 0.0 3.1e-30 105.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID27972.1 - 2.1e-16 60.6 7.7 3.2e-05 23.9 0.1 4.1 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID27972.1 - 2.4e-16 59.9 0.0 2.6e-09 36.9 0.0 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 AID27972.1 - 6.1e-10 39.5 0.0 0.0006 20.3 0.0 2.6 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 AID27972.1 - 6.2e-08 33.0 5.6 0.00061 20.1 0.5 3.6 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.6 AID27972.1 - 2.5e-07 31.2 2.2 0.015 15.7 0.1 2.8 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 AID27972.1 - 3.8e-06 26.5 0.1 0.07 12.9 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain NACHT PF05729.12 AID27972.1 - 5e-05 23.3 1.3 0.33 10.8 0.0 2.9 3 0 0 3 3 3 2 NACHT domain RsgA_GTPase PF03193.16 AID27972.1 - 5.4e-05 23.2 0.0 0.38 10.6 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase TniB PF05621.11 AID27972.1 - 0.00019 20.9 2.2 0.031 13.7 0.3 3.9 4 0 0 4 4 4 1 Bacterial TniB protein TsaE PF02367.17 AID27972.1 - 0.00024 21.1 0.2 0.19 11.8 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 AID27972.1 - 0.00032 20.5 0.7 0.17 11.6 0.0 3.1 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA PF00004.29 AID27972.1 - 0.00045 20.7 3.1 1.1 9.7 0.6 4.0 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 AID27972.1 - 0.00059 19.6 0.0 0.77 9.5 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_7 PF12775.7 AID27972.1 - 0.00073 19.1 0.2 1 8.9 0.0 2.8 3 0 0 3 3 2 1 P-loop containing dynein motor region AAA_5 PF07728.14 AID27972.1 - 0.0012 18.9 1.2 0.57 10.2 0.1 3.1 4 0 0 4 4 2 1 AAA domain (dynein-related subfamily) APS_kinase PF01583.20 AID27972.1 - 0.0014 18.5 0.0 1.2 9.0 0.0 2.4 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_24 PF13479.6 AID27972.1 - 0.0015 18.3 0.8 1.5 8.5 0.0 2.9 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 AID27972.1 - 0.0016 18.2 0.1 2.3 7.9 0.0 3.2 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_18 PF13238.6 AID27972.1 - 0.002 18.7 0.0 2.1 8.9 0.0 2.9 2 0 0 2 2 2 1 AAA domain Roc PF08477.13 AID27972.1 - 0.0021 18.3 0.0 0.84 9.9 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Mg_chelatase PF01078.21 AID27972.1 - 0.0022 17.4 0.0 1.6 8.0 0.0 2.8 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 AID27972.1 - 0.0029 17.8 1.4 2 8.6 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID27972.1 - 0.0035 16.9 2.3 6.5 6.3 0.0 3.9 3 1 0 3 3 3 0 AAA domain ATPase PF06745.13 AID27972.1 - 0.0037 16.7 1.8 2 7.7 0.0 2.8 3 0 0 3 3 3 2 KaiC AAA_23 PF13476.6 AID27972.1 - 0.0041 17.6 0.0 2.2 8.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 AID27972.1 - 0.0052 17.1 0.0 3.8 8.0 0.0 2.5 2 0 0 2 2 2 0 RNA helicase SbcCD_C PF13558.6 AID27972.1 - 0.0053 17.0 0.2 3.8 7.8 0.1 3.5 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit FtsK_SpoIIIE PF01580.18 AID27972.1 - 0.0058 16.0 0.4 0.64 9.3 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_15 PF13175.6 AID27972.1 - 0.0062 16.3 0.2 4.8 6.8 0.0 3.3 3 1 0 4 4 3 0 AAA ATPase domain MMR_HSR1 PF01926.23 AID27972.1 - 0.0079 16.3 0.7 3.3 7.8 0.1 2.8 3 0 0 3 3 2 1 50S ribosome-binding GTPase Pox_A32 PF04665.12 AID27972.1 - 0.0079 15.7 2.6 0.19 11.2 0.0 2.8 3 0 0 3 3 3 1 Poxvirus A32 protein T2SSE PF00437.20 AID27972.1 - 0.0095 15.0 0.1 1.3 8.0 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein NB-ARC PF00931.22 AID27972.1 - 0.0098 15.1 0.1 2.6 7.2 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain DUF3987 PF13148.6 AID27972.1 - 0.011 14.8 0.1 0.52 9.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) MobB PF03205.14 AID27972.1 - 0.011 15.6 0.6 0.46 10.4 0.1 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.17 AID27972.1 - 0.013 15.6 2.6 0.59 10.2 0.4 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 AID27972.1 - 0.016 15.0 0.5 4 7.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 AID27972.1 - 0.029 13.6 0.0 5.7 6.2 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin AAA_19 PF13245.6 AID27972.1 - 0.033 14.5 0.7 2.4 8.5 0.0 2.8 3 1 0 3 3 2 0 AAA domain AAA_13 PF13166.6 AID27972.1 - 0.034 12.8 0.3 2.1 6.9 0.0 3.1 4 0 0 4 4 4 0 AAA domain TrwB_AAD_bind PF10412.9 AID27972.1 - 0.035 13.0 0.1 7.1 5.4 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 AID27972.1 - 0.041 13.5 0.0 0.7 9.5 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain CbiA PF01656.23 AID27972.1 - 0.048 13.7 0.6 5.8 7.0 0.2 3.0 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_ATPase PF09818.9 AID27972.1 - 0.051 12.4 0.1 1.2 7.8 0.0 2.9 3 1 0 3 3 3 0 Predicted ATPase of the ABC class Orbi_VP6 PF01516.16 AID27972.1 - 0.086 12.4 0.0 1.9 8.0 0.0 2.1 2 0 0 2 2 2 0 Orbivirus helicase VP6 Myosin_head PF00063.21 AID27972.1 - 0.19 9.9 0.1 0.72 8.0 0.0 1.8 2 0 0 2 2 2 0 Myosin head (motor domain) ATP_bind_1 PF03029.17 AID27972.1 - 0.45 10.3 2.1 3.2 7.5 0.0 2.7 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Glyco_hydro_4 PF02056.16 AID27973.1 - 1.5e-68 230.0 0.1 1.9e-68 229.6 0.1 1.1 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.8 AID27973.1 - 1.5e-63 214.6 0.0 2e-63 214.3 0.0 1.1 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Ldh_1_N PF00056.23 AID27973.1 - 0.0088 16.1 0.4 0.67 10.0 0.1 2.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain YacG PF03884.14 AID27974.1 - 6.7e-14 51.4 3.0 9.9e-14 50.8 3.0 1.3 1 0 0 1 1 1 1 DNA gyrase inhibitor YacG zf-ribbon_3 PF13248.6 AID27974.1 - 0.0058 16.0 1.5 0.013 14.8 1.5 1.7 1 0 0 1 1 1 1 zinc-ribbon domain PLATZ PF04640.14 AID27974.1 - 0.031 14.9 0.4 0.043 14.4 0.4 1.2 1 0 0 1 1 1 0 PLATZ transcription factor zinc_ribbon_2 PF13240.6 AID27974.1 - 0.046 13.4 2.1 0.083 12.6 2.1 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-HIT PF04438.16 AID27974.1 - 0.067 13.1 2.5 0.092 12.6 2.5 1.2 1 0 0 1 1 1 0 HIT zinc finger DUF2116 PF09889.9 AID27974.1 - 0.069 13.1 0.2 0.083 12.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2256 PF10013.9 AID27974.1 - 2 8.6 7.7 1.7e+02 2.4 7.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) Maf PF02545.14 AID27975.1 - 3.8e-50 170.0 0.0 4.8e-50 169.7 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein eIF-1a PF01176.19 AID27976.1 - 1e-27 95.7 0.0 1.1e-27 95.6 0.0 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 AID27976.1 - 0.01 15.5 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain LMWPc PF01451.21 AID27977.1 - 9.6e-12 45.5 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase UPF0262 PF06793.12 AID27978.1 - 4.7e-72 241.1 0.0 5.4e-72 240.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0262) Histidinol_dh PF00815.20 AID27979.1 - 3.9e-164 546.5 2.5 4.4e-164 546.3 2.5 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DUF2948 PF11164.8 AID27980.1 - 5.4e-51 172.3 0.0 6e-51 172.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2948) EPSP_synthase PF00275.20 AID27981.1 - 1.5e-99 333.5 1.3 1.8e-99 333.3 1.3 1.1 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GHMP_kinases_C PF08544.13 AID27981.1 - 0.072 13.5 0.0 0.43 11.0 0.0 2.4 1 0 0 1 1 1 0 GHMP kinases C terminal HeH PF12949.7 AID27981.1 - 0.19 11.4 0.0 0.38 10.5 0.0 1.4 1 0 0 1 1 1 0 HeH/LEM domain GGDEF PF00990.21 AID27983.1 - 1.5e-21 76.8 0.0 2e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Peripla_BP_4 PF13407.6 AID27985.1 - 4.5e-05 23.2 1.5 7.6e-05 22.4 1.5 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 AID27985.1 - 5.6e-05 22.4 0.0 9.2e-05 21.7 0.0 1.5 1 1 0 1 1 1 1 Receptor family ligand binding region Big_9 PF17963.1 AID27987.1 - 7e-11 42.7 40.1 5.2e-10 39.9 7.9 7.3 5 3 1 6 6 6 2 Bacterial Ig domain Cadherin_4 PF17803.1 AID27987.1 - 3e-10 40.6 6.9 3e-10 40.6 6.9 7.0 5 3 1 6 6 6 2 Bacterial cadherin-like domain Cadherin_5 PF17892.1 AID27987.1 - 1.2e-06 28.3 12.7 0.00012 22.0 2.1 5.4 6 1 1 7 7 7 2 Cadherin-like domain HemolysinCabind PF00353.19 AID27987.1 - 0.00063 19.7 3.1 0.0011 18.9 0.3 3.1 3 0 0 3 3 3 1 RTX calcium-binding nonapeptide repeat (4 copies) Polyketide_cyc2 PF10604.9 AID27988.1 - 0.012 15.8 4.0 0.8 10.0 0.1 2.7 1 1 1 2 2 2 0 Polyketide cyclase / dehydrase and lipid transport GH43_C PF16369.5 AID27988.1 - 0.71 10.5 7.1 24 5.6 7.1 2.4 1 1 0 1 1 1 0 C-terminal lipocalin-like domain CBM60 PF16841.5 AID27988.1 - 2 8.9 6.9 0.51 10.8 0.4 2.9 2 1 1 3 3 3 0 Ca-dependent carbohydrate-binding module xylan-binding Peptidase_C93 PF06035.11 AID27991.1 - 1.3e-21 77.1 0.0 1.8e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial transglutaminase-like cysteine proteinase BTLCP DUF553 PF04473.12 AID27991.1 - 7.4e-09 35.3 0.0 1.1e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like domain Transglut_core PF01841.19 AID27991.1 - 3.3e-06 27.5 0.0 5e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily Parvo_NS1 PF01057.17 AID27991.1 - 0.13 11.3 0.0 0.18 10.8 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 RHH_4 PF13467.6 AID27992.1 - 1e-15 57.4 0.2 2.2e-15 56.3 0.2 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix domain HlyD_3 PF13437.6 AID27993.1 - 4.8e-24 85.1 3.0 1.3e-18 67.7 0.4 2.7 2 1 0 2 2 2 2 HlyD family secretion protein HlyD PF00529.20 AID27993.1 - 8.9e-13 47.9 0.2 1.3e-12 47.4 0.2 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 AID27993.1 - 2.1e-10 40.2 5.4 1.3e-07 31.0 0.3 3.2 2 1 1 3 3 3 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID27993.1 - 9.1e-06 25.4 7.5 2.6e-05 23.9 0.8 3.3 3 0 0 3 3 3 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID27993.1 - 0.00013 21.7 1.4 0.012 15.4 0.2 2.7 2 0 0 2 2 2 2 Biotin-requiring enzyme ABC_tran PF00005.27 AID27994.1 - 1.4e-28 100.1 0.0 3.2e-28 99.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID27994.1 - 4.6e-24 85.5 14.0 8.3e-24 84.7 14.0 1.4 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID27994.1 - 5.5e-05 22.7 0.0 7.7e-05 22.2 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID27994.1 - 0.0035 17.2 0.5 0.032 14.0 0.0 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 AID27994.1 - 0.018 15.3 0.6 1 9.6 0.1 3.2 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit NTPase_1 PF03266.15 AID27994.1 - 0.037 14.0 0.1 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 NTPase Peptidase_C39 PF03412.15 AID27994.1 - 0.039 13.8 0.0 0.074 12.9 0.0 1.3 1 0 0 1 1 1 0 Peptidase C39 family DUF948 PF06103.11 AID27994.1 - 0.13 12.6 1.8 0.83 10.0 1.8 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) TraQ PF09679.10 AID27994.1 - 2.8 7.9 5.4 4.8 7.2 0.0 3.2 3 0 0 3 3 3 0 Type-F conjugative transfer system pilin chaperone (TraQ) DUF4229 PF14012.6 AID27994.1 - 8.4 6.6 8.8 1.6 8.9 3.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) OEP PF02321.18 AID27995.1 - 1.2e-35 123.0 26.5 1.3e-19 70.8 11.7 2.0 2 0 0 2 2 2 2 Outer membrane efflux protein DUF3841 PF12952.7 AID27995.1 - 0.097 12.5 0.2 0.18 11.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3841) DUF3157 PF11355.8 AID27997.1 - 0.0046 16.6 0.1 0.0065 16.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3157) YkuD PF03734.14 AID27999.1 - 3.1e-16 60.1 0.0 3.9e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain AAA_31 PF13614.6 AID28000.1 - 6.7e-09 35.9 0.0 2.1e-08 34.3 0.0 1.9 2 1 0 2 2 2 1 AAA domain Response_reg PF00072.24 AID28000.1 - 0.00091 19.4 0.0 0.0055 16.9 0.0 2.2 2 0 0 2 2 2 1 Response regulator receiver domain CbiA PF01656.23 AID28000.1 - 0.028 14.5 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 AID28000.1 - 0.15 11.5 0.0 0.64 9.5 0.0 1.9 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ TadE PF07811.12 AID28001.1 - 6.8e-11 42.3 1.8 1.2e-10 41.5 1.8 1.4 1 0 0 1 1 1 1 TadE-like protein TadE PF07811.12 AID28002.1 - 7.5e-10 38.9 0.7 1.5e-09 38.0 0.7 1.5 1 0 0 1 1 1 1 TadE-like protein Tad PF13400.6 AID28003.1 - 1.8e-07 31.3 1.2 5.2e-07 29.9 1.2 1.8 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like CAP_N PF01213.19 AID28004.1 - 0.083 12.4 1.3 0.076 12.5 1.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Secretin PF00263.21 AID28005.1 - 4.5e-48 163.1 0.3 4.5e-48 163.1 0.3 2.4 2 1 0 2 2 2 1 Bacterial type II and III secretion system protein T2SS-T3SS_pil_N PF13629.6 AID28005.1 - 8.1e-16 57.5 0.9 2.2e-15 56.1 0.8 1.9 1 1 0 1 1 1 1 Pilus formation protein N terminal region BON PF04972.17 AID28005.1 - 1.6e-05 25.1 1.0 3.5e-05 24.0 1.0 1.6 1 0 0 1 1 1 1 BON domain DUF1659 PF07872.11 AID28005.1 - 0.0054 16.4 0.9 1.2 8.9 0.0 3.0 3 0 0 3 3 3 2 Protein of unknown function (DUF1659) RcpC PF16976.5 AID28006.1 - 2.6e-30 104.8 4.9 2.6e-30 104.8 4.9 2.0 2 0 0 2 2 2 1 Flp pilus assembly protein RcpC/CpaB SAF PF08666.12 AID28006.1 - 1.8e-07 31.7 0.1 3.8e-07 30.6 0.1 1.6 1 0 0 1 1 1 1 SAF domain PI-PLC-X PF00388.19 AID28006.1 - 0.092 12.3 0.0 3.4 7.2 0.0 2.2 2 0 0 2 2 2 0 Phosphatidylinositol-specific phospholipase C, X domain Dpy-30 PF05186.13 AID28006.1 - 0.096 12.4 0.0 0.34 10.6 0.0 2.0 2 0 0 2 2 2 0 Dpy-30 motif Toprim_4 PF13662.6 AID28006.1 - 0.096 13.2 0.2 0.39 11.2 0.0 2.1 2 0 0 2 2 2 0 Toprim domain Histone_HNS PF00816.21 AID28006.1 - 0.27 12.1 6.1 0.29 12.0 3.2 2.3 1 1 1 2 2 2 0 H-NS histone family PIN_9 PF18477.1 AID28006.1 - 0.81 10.0 4.7 0.39 11.0 1.9 1.9 2 0 0 2 2 2 0 PIN like domain Flp_Fap PF04964.14 AID28007.1 - 1.3e-13 50.5 1.3 1.5e-13 50.3 1.3 1.1 1 0 0 1 1 1 1 Flp/Fap pilin component YesK PF14150.6 AID28007.1 - 0.00024 21.2 0.1 0.00028 21.0 0.1 1.1 1 0 0 1 1 1 1 YesK-like protein TadE PF07811.12 AID28007.1 - 0.12 12.7 4.5 0.15 12.4 4.5 1.2 1 0 0 1 1 1 0 TadE-like protein Flp_Fap PF04964.14 AID28008.1 - 3.9e-14 52.2 1.3 4.4e-14 52.0 1.3 1.1 1 0 0 1 1 1 1 Flp/Fap pilin component YesK PF14150.6 AID28008.1 - 0.0055 16.9 0.1 0.0067 16.6 0.1 1.1 1 0 0 1 1 1 1 YesK-like protein T2SSE PF00437.20 AID28009.1 - 1.6e-82 276.7 2.2 2.3e-82 276.1 2.2 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 AID28009.1 - 0.0001 22.7 0.0 0.00027 21.4 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID28009.1 - 0.00017 22.2 0.0 0.00029 21.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID28009.1 - 0.00018 20.9 0.0 0.00061 19.1 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin ABC_tran PF00005.27 AID28009.1 - 0.00053 20.5 0.1 0.0011 19.5 0.1 1.6 1 1 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 AID28009.1 - 0.00068 19.3 0.1 0.0015 18.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 AID28009.1 - 0.0013 18.2 0.0 0.0037 16.7 0.0 1.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_28 PF13521.6 AID28009.1 - 0.0016 18.7 0.0 0.003 17.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 AID28009.1 - 0.0076 15.7 0.0 0.016 14.6 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 AID28009.1 - 0.0087 15.6 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region ATP_bind_1 PF03029.17 AID28009.1 - 0.011 15.6 0.0 0.02 14.7 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 AID28009.1 - 0.013 15.8 0.0 0.046 14.0 0.0 2.0 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 AID28009.1 - 0.019 15.1 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 AID28009.1 - 0.02 15.3 0.1 0.074 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 AID28009.1 - 0.027 14.2 0.0 0.065 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID28009.1 - 0.031 14.2 0.0 0.059 13.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase cobW PF02492.19 AID28009.1 - 0.037 13.6 0.1 0.12 12.0 0.0 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP-synt_ab PF00006.25 AID28009.1 - 0.065 12.9 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain PIF1 PF05970.14 AID28009.1 - 0.074 12.2 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase AAA_18 PF13238.6 AID28009.1 - 0.075 13.6 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 AID28009.1 - 0.076 11.9 0.0 0.18 10.7 0.0 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NTPase_1 PF03266.15 AID28009.1 - 0.079 12.9 0.3 1.9 8.4 0.1 2.7 3 0 0 3 3 3 0 NTPase UvrD-helicase PF00580.21 AID28009.1 - 0.097 12.2 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain KAP_NTPase PF07693.14 AID28009.1 - 0.099 11.9 0.0 0.34 10.1 0.0 1.8 1 1 1 2 2 2 0 KAP family P-loop domain Sigma54_activat PF00158.26 AID28009.1 - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF2075 PF09848.9 AID28009.1 - 0.11 11.7 0.0 0.22 10.7 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 AID28009.1 - 0.14 12.1 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain T2SSF PF00482.23 AID28010.1 - 8.6e-20 71.0 1.9 8.6e-20 71.0 1.9 3.1 2 1 1 3 3 3 1 Type II secretion system (T2SS), protein F Pex24p PF06398.11 AID28010.1 - 0.11 11.4 0.2 0.16 11.0 0.2 1.3 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin T2SSF PF00482.23 AID28011.1 - 2.1e-21 76.2 4.0 2.1e-21 76.2 4.0 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF948 PF06103.11 AID28011.1 - 0.022 15.0 1.0 0.022 15.0 1.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2207 PF09972.9 AID28011.1 - 2.8 6.6 4.4 42 2.7 3.9 2.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) TPR_2 PF07719.17 AID28012.1 - 2.5e-10 39.7 6.3 3.3e-07 29.9 0.4 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID28012.1 - 8.9e-09 34.8 5.6 1.4e-05 24.7 0.6 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID28012.1 - 7.2e-07 29.4 1.5 0.0028 17.9 0.4 2.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID28012.1 - 9.4e-07 28.6 1.2 3.4e-05 23.7 0.2 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 AID28012.1 - 5.6e-06 26.9 1.1 5.6e-06 26.9 1.1 2.5 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 AID28012.1 - 2e-05 24.7 1.7 0.38 11.2 0.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 AID28012.1 - 0.00011 21.8 3.9 0.021 14.5 0.2 3.0 2 1 1 3 3 3 2 TPR repeat TPR_19 PF14559.6 AID28012.1 - 0.00052 20.5 0.9 0.25 11.9 0.1 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID28012.1 - 0.00074 20.1 0.8 2 9.4 0.0 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 AID28012.1 - 0.05 13.5 0.3 0.14 12.1 0.3 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat Peptidase_A24 PF01478.18 AID28013.1 - 7.5e-09 36.0 14.4 1.3e-08 35.2 14.4 1.4 1 0 0 1 1 1 1 Type IV leader peptidase family FA_hydroxylase PF04116.13 AID28014.1 - 2.1e-26 92.8 11.8 2.1e-26 92.8 11.8 1.5 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily PEMT PF04191.13 AID28015.1 - 1.4e-08 35.0 1.4 1.4e-08 35.0 1.4 2.3 2 2 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 AID28015.1 - 9.5e-07 29.2 0.7 9.5e-07 29.2 0.7 2.3 2 2 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF1295 PF06966.12 AID28015.1 - 0.023 14.2 1.4 0.028 13.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1295) ERG4_ERG24 PF01222.17 AID28015.1 - 0.039 12.7 0.2 0.083 11.6 0.0 1.6 2 1 0 2 2 2 0 Ergosterol biosynthesis ERG4/ERG24 family DUF3792 PF12670.7 AID28015.1 - 1.7 8.8 13.3 0.2 11.8 8.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3792) YfhO PF09586.10 AID28015.1 - 1.9 6.6 4.5 1.8 6.7 2.3 1.8 1 1 0 2 2 2 0 Bacterial membrane protein YfhO Vma12 PF11712.8 AID28015.1 - 2.9 8.0 7.1 10 6.2 6.6 2.1 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Peptidase_M15_2 PF05951.13 AID28017.1 - 2.7e-77 257.7 0.0 4e-77 257.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF882) Peptidase_M15_3 PF08291.11 AID28017.1 - 2.3e-08 34.1 0.0 4.4e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase M15 DUF1930 PF09122.10 AID28017.1 - 0.044 13.8 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1930) Cu-oxidase_3 PF07732.15 AID28019.1 - 6.8e-34 116.4 0.5 1.9e-29 102.1 0.1 2.5 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 AID28019.1 - 4.3e-30 104.2 0.7 4.8e-25 87.9 0.0 3.2 3 0 0 3 3 3 3 Multicopper oxidase Cu-oxidase PF00394.22 AID28019.1 - 2e-06 28.0 0.0 0.018 15.2 0.0 3.3 5 0 0 5 5 5 2 Multicopper oxidase Cupredoxin_1 PF13473.6 AID28019.1 - 0.06 13.5 0.0 7.4 6.7 0.0 3.3 3 1 1 4 4 4 0 Cupredoxin-like domain NAD_binding_3 PF03447.16 AID28020.1 - 9.5e-05 23.0 2.6 0.00023 21.8 0.8 2.8 3 1 1 4 4 4 1 Homoserine dehydrogenase, NAD binding domain SAF PF08666.12 AID28020.1 - 0.00024 21.7 0.0 0.00084 19.9 0.0 2.0 1 1 0 1 1 1 1 SAF domain F420_oxidored PF03807.17 AID28020.1 - 0.019 15.6 0.3 0.045 14.3 0.3 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 AID28020.1 - 0.072 13.3 0.7 0.14 12.3 0.7 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 AID28020.1 - 0.095 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase P5CR_dimer PF14748.6 AID28021.1 - 1.4e-31 108.8 4.8 2.4e-31 108.0 3.5 1.9 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 AID28021.1 - 5.4e-10 39.7 0.0 1e-09 38.8 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 AID28021.1 - 5.8e-05 23.9 0.0 0.00011 23.0 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Wzy_C PF04932.15 AID28022.1 - 1.7e-07 31.0 21.8 2.9e-06 27.0 17.1 3.8 2 1 0 2 2 2 1 O-Antigen ligase O-antigen_lig PF13425.6 AID28022.1 - 0.07 11.9 3.0 0.13 11.1 3.0 1.4 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Glycos_transf_2 PF00535.26 AID28023.1 - 6e-12 45.7 0.0 8.3e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID28023.1 - 5.5e-10 39.5 0.0 8.6e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 AID28023.1 - 0.004 17.1 0.1 0.011 15.6 0.1 1.8 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_trans_1_4 PF13692.6 AID28024.1 - 8.7e-15 55.3 0.1 1e-13 51.9 0.0 2.5 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 AID28024.1 - 1.1e-06 29.1 5.4 1.1e-06 29.1 5.4 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 AID28024.1 - 0.00088 19.3 0.6 0.003 17.6 0.6 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_tran_WecB PF03808.13 AID28025.1 - 5.2e-50 169.7 0.0 7.2e-50 169.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family DUF2639 PF11121.8 AID28026.1 - 0.089 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) Polysacc_synt_3 PF13440.6 AID28027.1 - 0.51 9.5 24.5 0.0097 15.2 16.3 2.2 2 1 0 2 2 2 0 Polysaccharide biosynthesis protein Wzz PF02706.15 AID28028.1 - 2.8e-09 37.2 0.1 8.2e-09 35.7 0.1 1.8 1 0 0 1 1 1 1 Chain length determinant protein GNVR PF13807.6 AID28028.1 - 1.7e-07 31.1 2.2 6.8e-06 25.9 0.0 3.2 2 1 1 3 3 3 1 G-rich domain on putative tyrosine kinase CAMSAP_CC1 PF17095.5 AID28028.1 - 0.0097 15.7 0.2 0.031 14.1 0.2 1.8 1 0 0 1 1 1 1 Spectrin-binding region of Ca2+-Calmodulin Syntaxin-6_N PF09177.11 AID28028.1 - 2 9.0 8.7 1.9 9.1 1.0 3.4 3 0 0 3 3 3 0 Syntaxin 6, N-terminal THF_DHG_CYH_C PF02882.19 AID28029.1 - 1.1e-65 219.8 1.0 1.1e-65 219.8 1.0 1.7 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 AID28029.1 - 1.5e-37 128.4 0.2 2.1e-37 127.9 0.2 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HTH_18 PF12833.7 AID28030.1 - 1e-22 80.2 1.3 1.6e-22 79.6 1.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 AID28030.1 - 1.7e-09 37.7 0.0 2.2e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 AID28030.1 - 6.2e-09 35.7 0.0 7.5e-05 22.7 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family VWA_2 PF13519.6 AID28031.1 - 2.1e-13 50.9 0.0 7.2e-13 49.1 0.0 2.0 3 0 0 3 3 1 1 von Willebrand factor type A domain VWA PF00092.28 AID28031.1 - 7.2e-12 45.9 0.0 1.3e-11 45.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain CarboxypepD_reg PF13620.6 AID28031.1 - 1.9e-06 28.0 7.1 0.16 12.3 0.0 4.4 4 0 0 4 4 4 2 Carboxypeptidase regulatory-like domain VWA_3 PF13768.6 AID28031.1 - 3.1e-06 27.2 0.0 5.6e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain PEGA PF08308.11 AID28031.1 - 0.0018 18.1 0.2 0.19 11.6 0.0 3.5 4 0 0 4 4 4 1 PEGA domain VWA_CoxE PF05762.14 AID28031.1 - 0.014 14.8 0.0 0.32 10.3 0.0 2.1 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein Ribosomal_60s PF00428.19 AID28031.1 - 0.023 15.3 4.9 0.023 15.3 4.9 2.5 2 0 0 2 2 2 0 60s Acidic ribosomal protein CarbopepD_reg_2 PF13715.6 AID28031.1 - 0.027 14.5 0.6 0.29 11.2 0.0 2.8 4 0 0 4 4 4 0 CarboxypepD_reg-like domain YjeF_N PF03853.15 AID28031.1 - 0.033 14.1 0.1 0.1 12.5 0.1 1.8 2 0 0 2 2 2 0 YjeF-related protein N-terminus F420H2_quin_red PF04075.14 AID28031.1 - 0.064 13.4 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase DUF4115 PF13464.6 AID28031.1 - 0.19 11.9 5.3 2.2 8.5 0.1 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4115) DEC-1_N PF04625.13 AID28031.1 - 1.1 8.2 5.4 1.8 7.5 5.4 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region ILVD_EDD PF00920.21 AID28032.1 - 8.6e-162 539.3 0.2 1.3e-161 538.7 0.2 1.2 1 0 0 1 1 1 1 Dehydratase family Glucosamine_iso PF01182.20 AID28033.1 - 8.1e-51 173.1 0.1 8.8e-51 172.9 0.1 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase G6PD_C PF02781.16 AID28034.1 - 7.2e-119 396.3 0.0 8.8e-119 396.0 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 AID28034.1 - 8.9e-59 199.1 0.0 1.6e-58 198.2 0.0 1.4 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 AID28034.1 - 0.059 14.2 0.0 0.13 13.1 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold adh_short_C2 PF13561.6 AID28036.1 - 6.8e-64 215.6 1.4 8.2e-64 215.4 1.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28036.1 - 7.6e-50 169.1 1.5 9.3e-50 168.8 1.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28036.1 - 8.3e-05 22.6 0.4 0.00014 21.8 0.4 1.3 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID28036.1 - 0.022 14.7 0.3 0.032 14.1 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SH3_4 PF06347.13 AID28037.1 - 8e-11 41.6 0.4 3e-10 39.7 0.4 2.0 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_3 PF08239.11 AID28037.1 - 1.4e-09 38.1 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain DAO PF01266.24 AID28038.1 - 1.4e-39 136.7 0.4 1.6e-39 136.5 0.4 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Gln-synt_C PF00120.24 AID28039.1 - 3.1e-108 361.8 0.0 3.7e-108 361.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AID28039.1 - 1.2e-05 24.9 0.0 3.1e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 AID28039.1 - 0.00059 19.6 0.0 0.0053 16.6 0.0 2.2 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Hydrolase PF00702.26 AID28040.1 - 2.6e-06 27.9 0.1 5.3e-06 26.9 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 AID28040.1 - 4.8e-06 26.8 0.0 1e-05 25.7 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 AID28040.1 - 0.005 17.3 0.1 0.0067 16.9 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID28040.1 - 0.0063 16.6 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like DUF2209 PF09974.9 AID28040.1 - 0.042 14.2 0.0 0.07 13.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2209) Response_reg PF00072.24 AID28041.1 - 0.0022 18.1 0.0 0.0038 17.4 0.0 1.4 1 1 0 1 1 1 1 Response regulator receiver domain Flg_hook PF02120.16 AID28042.1 - 0.017 15.0 0.3 0.021 14.7 0.3 1.2 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ICL PF00463.21 AID28043.1 - 9.5e-104 347.8 0.7 2.3e-52 178.2 0.0 2.0 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 AID28043.1 - 1.2e-15 57.6 0.4 2.3e-15 56.7 0.4 1.5 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase DUF2083 PF09856.9 AID28044.1 - 3.8e-58 195.8 0.0 5.3e-58 195.3 0.0 1.2 1 0 0 1 1 1 1 Predicted transcriptional regulator (DUF2083) Peptidase_M78 PF06114.13 AID28044.1 - 2.2e-09 37.3 0.4 2.9e-09 36.9 0.4 1.2 1 0 0 1 1 1 1 IrrE N-terminal-like domain EamA PF00892.20 AID28045.1 - 1.2e-24 87.1 48.5 7.7e-16 58.5 23.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 AID28045.1 - 0.00045 19.8 2.5 0.00068 19.2 2.5 1.3 1 0 0 1 1 1 1 Solute carrier family 35 TPT PF03151.16 AID28045.1 - 0.0013 18.1 4.3 0.0019 17.6 4.3 1.3 1 0 0 1 1 1 1 Triose-phosphate Transporter family CRT-like PF08627.10 AID28045.1 - 0.15 11.0 4.7 0.26 10.2 4.7 1.3 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like HlyE PF06109.13 AID28045.1 - 0.22 10.8 2.2 0.36 10.1 2.2 1.2 1 0 0 1 1 1 0 Haemolysin E (HlyE) SBP_bac_8 PF13416.6 AID28046.1 - 1.2e-32 113.9 2.1 1.4e-32 113.6 2.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28046.1 - 3.5e-23 82.3 0.6 5.1e-23 81.8 0.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28046.1 - 7.8e-17 62.2 3.3 1.2e-16 61.6 3.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID28046.1 - 4.8e-07 29.7 0.1 4.4e-05 23.3 0.1 3.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 AID28046.1 - 3.6e-05 22.7 0.1 0.0065 15.2 0.0 2.4 2 1 0 2 2 2 2 Hypothetical lipoprotein (MG045 family) TPALS PF18178.1 AID28046.1 - 0.072 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 TIR- and PNP-associating SLOG family ABC_tran PF00005.27 AID28047.1 - 2.2e-36 125.4 0.0 3.7e-36 124.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28047.1 - 3.4e-19 68.8 0.2 9.8e-19 67.3 0.0 1.9 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 AID28047.1 - 6.7e-07 29.4 0.1 0.0064 16.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28047.1 - 3e-05 23.6 0.3 0.013 15.0 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28047.1 - 0.0022 17.7 0.1 0.053 13.3 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID28047.1 - 0.0037 17.2 0.0 0.0089 15.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_28 PF13521.6 AID28047.1 - 0.0093 16.2 0.0 0.035 14.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID28047.1 - 0.012 15.9 0.4 0.053 13.8 0.4 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID28047.1 - 0.019 15.3 0.0 0.043 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain TOBE PF03459.17 AID28047.1 - 0.054 13.8 0.1 0.49 10.7 0.0 2.5 2 1 0 2 2 2 0 TOBE domain sCache_3_2 PF17203.4 AID28047.1 - 0.075 13.2 0.1 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Single cache domain 3 AAA_33 PF13671.6 AID28047.1 - 0.084 13.0 0.0 0.23 11.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID28047.1 - 0.14 12.6 1.3 0.15 12.5 0.2 1.5 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 AID28048.1 - 2.6e-14 53.4 37.2 7.2e-12 45.4 37.2 2.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28049.1 - 1.2e-16 61.0 14.6 1.2e-16 61.0 14.6 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Col_cuticle_N PF01484.17 AID28049.1 - 2.8 8.1 0.0 2.8 8.1 0.0 3.6 5 0 0 5 5 5 0 Nematode cuticle collagen N-terminal domain AsmA_2 PF13502.6 AID28050.1 - 2e-17 63.5 9.3 4.4e-15 55.8 0.9 3.6 1 1 3 4 4 4 2 AsmA-like C-terminal region AsmA PF05170.14 AID28050.1 - 8.5e-15 54.6 0.1 8.3e-07 28.2 0.0 2.3 2 0 0 2 2 2 2 AsmA family RNase_II_C_S1 PF18614.1 AID28050.1 - 0.016 15.2 1.4 8.4 6.4 0.0 3.3 3 0 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain AMP-binding PF00501.28 AID28051.1 - 3.5e-49 167.5 0.0 6.7e-49 166.6 0.0 1.3 2 0 0 2 2 2 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID28051.1 - 1.5e-08 35.4 0.6 9.9e-08 32.9 0.0 2.6 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 AID28051.1 - 2.4e-07 30.5 0.0 7.2e-07 29.0 0.0 1.9 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Phasin_2 PF09361.10 AID28053.1 - 1.9e-17 63.3 12.4 3.9e-17 62.4 8.2 2.1 1 1 1 2 2 2 2 Phasin protein Ribosomal_S30AE PF02482.19 AID28053.1 - 0.0091 16.8 4.7 0.02 15.7 1.4 2.1 1 1 1 2 2 2 1 Sigma 54 modulation protein / S30EA ribosomal protein ApoO PF09769.9 AID28053.1 - 0.081 12.9 2.1 0.26 11.3 0.3 2.1 1 1 1 2 2 2 0 Apolipoprotein O DUF883 PF05957.13 AID28053.1 - 0.22 12.1 8.7 3.1 8.5 1.5 2.8 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) FCH PF00611.23 AID28053.1 - 0.44 10.9 5.1 0.3 11.4 0.3 2.2 2 0 0 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain V-ATPase_G_2 PF16999.5 AID28053.1 - 3.6 8.1 12.8 3.9 8.0 4.8 2.2 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Phage_integrase PF00589.22 AID28054.1 - 7.2e-06 25.9 0.1 0.00035 20.4 0.1 2.4 1 1 0 1 1 1 1 Phage integrase family DUF3637 PF12337.8 AID28054.1 - 0.042 14.2 0.0 0.12 12.7 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3637) sCache_2 PF17200.4 AID28054.1 - 0.18 11.7 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 Single Cache domain 2 SBP_bac_8 PF13416.6 AID28058.1 - 5.8e-34 118.2 0.7 9.3e-34 117.5 0.7 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28058.1 - 1.6e-31 110.4 3.8 5.1e-31 108.8 3.8 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID28058.1 - 0.00023 21.0 0.0 0.12 12.1 0.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID28059.1 - 3.8e-19 69.1 20.7 1.7e-18 67.1 17.4 2.2 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28060.1 - 7.5e-26 91.0 14.3 7.5e-26 91.0 14.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Vpu PF00558.19 AID28060.1 - 6.2 6.7 5.9 1.2 8.9 1.9 1.9 2 0 0 2 2 2 0 Vpu protein DUF5060 PF16586.5 AID28061.1 - 2.1e-25 88.9 0.0 5.3e-25 87.6 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF5060) DUF4038 PF13204.6 AID28061.1 - 3.9e-18 66.2 4.8 5.5e-18 65.6 4.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4038) DUF5605 PF18310.1 AID28061.1 - 1.2e-14 54.0 0.0 3.1e-14 52.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5605) ABC_tran PF00005.27 AID28062.1 - 2.9e-31 108.8 0.0 5.4e-31 107.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID28062.1 - 1.1e-11 45.3 0.7 5.2e-11 43.2 0.2 2.5 3 0 0 3 3 1 1 MalK OB fold domain TOBE_2 PF08402.10 AID28062.1 - 6.3e-11 42.3 0.3 2.3e-10 40.5 0.3 2.0 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID28062.1 - 1.1e-09 38.5 0.0 0.00091 19.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID28062.1 - 4.5e-07 30.1 0.6 1.5e-06 28.4 0.6 1.9 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 AID28062.1 - 1.7e-05 25.3 1.5 3.3e-05 24.3 0.3 2.3 2 0 0 2 2 1 1 CysA C-terminal regulatory domain RsgA_GTPase PF03193.16 AID28062.1 - 1.7e-05 24.8 0.8 0.00028 20.9 0.1 2.2 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 AID28062.1 - 6.4e-05 22.5 0.1 0.0002 20.8 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID28062.1 - 0.0002 21.8 0.0 0.00078 19.9 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID28062.1 - 0.00036 21.0 0.1 0.0006 20.2 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID28062.1 - 0.0008 19.1 0.0 0.0017 18.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 AID28062.1 - 0.002 18.1 0.0 0.0037 17.2 0.0 1.4 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 AID28062.1 - 0.0022 18.2 0.1 0.0039 17.5 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28062.1 - 0.0076 16.0 0.0 0.018 14.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 AID28062.1 - 0.0091 15.6 0.0 0.022 14.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID28062.1 - 0.011 15.9 0.1 0.018 15.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID28062.1 - 0.011 15.4 0.0 0.042 13.6 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 AID28062.1 - 0.013 15.4 0.1 0.035 14.0 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 AID28062.1 - 0.017 15.2 0.2 0.036 14.1 0.2 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 AID28062.1 - 0.017 15.4 0.1 0.088 13.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID28062.1 - 0.019 15.5 0.1 0.035 14.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 AID28062.1 - 0.028 13.9 0.2 1.2 8.6 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein MMR_HSR1 PF01926.23 AID28062.1 - 0.062 13.4 0.2 0.13 12.4 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID28062.1 - 0.092 13.3 0.0 0.16 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 AID28062.1 - 0.12 12.4 0.0 0.37 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 AID28062.1 - 0.12 12.7 0.0 0.25 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ATPase_2 PF01637.18 AID28062.1 - 0.13 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 AID28062.1 - 0.14 11.3 0.1 0.24 10.5 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain SBD_N PF07005.11 AID28063.1 - 3.9e-49 167.4 0.0 5.2e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 Sugar-binding N-terminal domain NBD_C PF17042.5 AID28063.1 - 4.1e-34 118.6 1.4 4.1e-34 118.6 1.4 1.6 2 0 0 2 2 2 1 Nucleotide-binding C-terminal domain RuBisCO_large PF00016.20 AID28064.1 - 2.1e-98 329.2 0.0 3.2e-98 328.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 AID28064.1 - 2.9e-07 30.7 0.0 1.1e-06 28.9 0.0 1.9 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain FCD PF07729.12 AID28065.1 - 4.5e-21 75.6 0.5 9.1e-21 74.6 0.5 1.5 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28065.1 - 2e-18 65.8 0.7 6.1e-18 64.2 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FadR_C PF07840.12 AID28065.1 - 2.7e-05 24.1 0.1 3.4e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 FadR C-terminal domain TrmB PF01978.19 AID28065.1 - 0.0018 18.1 0.0 0.0046 16.8 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Glyco_transf_88 PF16849.5 AID28065.1 - 0.026 13.4 0.1 0.04 12.8 0.1 1.3 1 1 0 1 1 1 0 Glycosyltransferase family 88 HTH_27 PF13463.6 AID28065.1 - 0.054 14.0 0.1 0.14 12.7 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_11 PF08279.12 AID28065.1 - 0.1 12.6 0.0 0.46 10.5 0.0 2.1 1 0 0 1 1 1 0 HTH domain PaaX PF07848.12 AID28065.1 - 0.13 12.5 0.1 0.31 11.3 0.1 1.6 1 0 0 1 1 1 0 PaaX-like protein Glyco_hydro_30C PF17189.4 AID28066.1 - 0.045 14.0 0.0 0.19 12.0 0.0 2.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain GFO_IDH_MocA PF01408.22 AID28067.1 - 7.1e-22 78.5 0.1 1.2e-21 77.8 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID28067.1 - 0.00018 21.5 0.0 0.00034 20.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain BPD_transp_2 PF02653.16 AID28068.1 - 1.7e-45 155.3 44.1 1.7e-45 155.3 44.1 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF543 PF04418.12 AID28068.1 - 0.61 10.1 6.2 0.25 11.3 0.6 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF543) ABC_tran PF00005.27 AID28069.1 - 4.7e-56 189.1 0.4 2.2e-30 105.9 0.1 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28069.1 - 2.5e-11 44.0 2.2 1.7e-05 24.8 0.2 3.2 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID28069.1 - 4.7e-05 23.0 0.1 0.005 16.6 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28069.1 - 7.1e-05 23.4 0.1 0.0021 18.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AID28069.1 - 0.00014 21.8 0.1 0.013 15.5 0.1 2.4 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 AID28069.1 - 0.0033 16.9 4.3 0.065 12.7 2.0 3.2 2 2 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID28069.1 - 0.0039 16.9 0.0 0.0059 16.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.6 AID28069.1 - 0.0064 15.2 0.1 0.0098 14.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28069.1 - 0.018 14.8 1.9 0.07 12.8 1.1 2.4 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 AID28069.1 - 0.028 13.7 0.3 0.5 9.6 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin DLIC PF05783.11 AID28069.1 - 0.033 13.0 0.1 0.05 12.4 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_16 PF13191.6 AID28069.1 - 0.035 14.5 0.8 1 9.7 0.1 2.5 2 1 0 2 2 2 0 AAA ATPase domain MMR_HSR1 PF01926.23 AID28069.1 - 0.042 13.9 0.1 2.2 8.4 0.1 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA PF00004.29 AID28069.1 - 0.093 13.2 2.3 8.5 6.8 2.2 3.4 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID28069.1 - 0.11 12.8 2.5 1 9.6 0.9 3.0 2 2 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID28069.1 - 0.19 10.5 2.8 4.1 6.1 0.0 3.2 3 1 0 3 3 3 0 Predicted ATPase of the ABC class DUF2291 PF10054.9 AID28070.1 - 1.2e-68 230.8 0.1 1.3e-68 230.6 0.1 1.0 1 0 0 1 1 1 1 Predicted periplasmic lipoprotein (DUF2291) Peripla_BP_4 PF13407.6 AID28071.1 - 5.5e-58 196.5 18.6 6.8e-58 196.2 18.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28071.1 - 6.1e-21 75.1 2.9 7.3e-21 74.8 2.9 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID28071.1 - 1e-09 38.9 0.1 1.5e-08 35.2 0.0 2.0 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Arginase PF00491.21 AID28071.1 - 0.0002 21.0 0.1 0.00027 20.6 0.1 1.2 1 0 0 1 1 1 1 Arginase family PucR PF07905.11 AID28071.1 - 0.056 13.7 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family PGDH_C PF16896.5 AID28072.1 - 1.5e-70 236.1 0.2 2.2e-70 235.6 0.2 1.2 1 0 0 1 1 1 1 Phosphogluconate dehydrogenase (decarboxylating) C-term F420_oxidored PF03807.17 AID28072.1 - 4.9e-07 30.3 0.2 8e-07 29.6 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Rossmann-like PF10727.9 AID28072.1 - 3.2e-06 27.0 0.2 5.6e-06 26.2 0.2 1.3 1 0 0 1 1 1 1 Rossmann-like domain NAD_binding_2 PF03446.15 AID28072.1 - 0.00014 22.1 0.1 0.00027 21.1 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 AID28072.1 - 0.0036 16.9 0.0 0.0056 16.3 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 AID28072.1 - 0.0091 16.0 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PDH PF02153.17 AID28072.1 - 0.042 12.9 0.0 0.06 12.3 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase BPD_transp_2 PF02653.16 AID28073.1 - 1.7e-32 112.7 49.9 1.7e-32 112.7 49.9 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28074.1 - 4.8e-35 121.1 0.0 4.1e-23 82.4 0.0 2.9 2 1 0 2 2 2 2 ABC transporter BPD_transp_2 PF02653.16 AID28074.1 - 1.7e-33 116.0 38.5 1.7e-33 116.0 38.5 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component AAA_21 PF13304.6 AID28074.1 - 7.5e-09 35.8 0.2 0.036 13.9 0.1 3.2 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28074.1 - 0.0019 17.7 1.6 0.85 9.0 0.0 3.3 3 1 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID28074.1 - 0.0026 18.3 0.1 0.0041 17.7 0.1 1.2 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 AID28074.1 - 0.017 15.3 0.0 0.22 11.8 0.0 2.7 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 AID28074.1 - 0.022 14.5 0.3 0.17 11.6 0.1 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain PhrC_PhrF PF11131.8 AID28074.1 - 0.039 13.6 0.0 0.19 11.3 0.0 2.3 1 0 0 1 1 1 0 Rap-phr extracellular signalling MMR_HSR1 PF01926.23 AID28074.1 - 0.099 12.7 0.0 0.3 11.2 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase MukB PF04310.12 AID28074.1 - 0.13 12.1 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 MukB N-terminal RsgA_GTPase PF03193.16 AID28074.1 - 0.13 12.2 0.3 0.53 10.2 0.1 2.0 2 0 0 2 2 2 0 RsgA GTPase AAA_13 PF13166.6 AID28074.1 - 0.36 9.4 0.1 15 4.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain Peripla_BP_4 PF13407.6 AID28075.1 - 7e-41 140.5 15.7 9.6e-41 140.0 15.7 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain NAD_binding_3 PF03447.16 AID28075.1 - 0.014 16.0 0.4 0.029 15.0 0.4 1.5 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain RcpC PF16976.5 AID28075.1 - 0.055 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB TetR_C_28 PF17937.1 AID28076.1 - 0.083 13.4 0.1 0.084 13.3 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DAO PF01266.24 AID28077.1 - 3.3e-62 211.1 5.5 3.7e-62 211.0 5.5 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID28077.1 - 6.8e-07 29.8 0.1 0.00029 21.3 0.4 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID28077.1 - 1.4e-06 27.7 2.1 2.3e-06 27.0 2.1 1.5 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AID28077.1 - 3.3e-06 27.2 0.5 9.4e-06 25.8 0.5 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID28077.1 - 1.1e-05 24.9 0.0 0.00035 19.9 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID28077.1 - 2.3e-05 23.9 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID28077.1 - 3.5e-05 23.2 0.1 4.9e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 AID28077.1 - 8e-05 21.9 0.0 0.00011 21.4 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 AID28077.1 - 0.00051 19.4 0.0 0.25 10.5 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 AID28077.1 - 0.00068 19.6 0.3 0.0011 18.9 0.3 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 AID28077.1 - 0.004 15.9 0.3 0.062 12.0 0.3 2.0 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 AID28077.1 - 0.0058 15.9 0.3 0.01 15.1 0.3 1.4 1 0 0 1 1 1 1 Thi4 family ApbA PF02558.16 AID28077.1 - 0.0059 16.3 0.4 0.011 15.4 0.4 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 AID28077.1 - 0.011 15.7 0.1 0.093 12.7 0.0 2.1 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.21 AID28077.1 - 0.068 12.5 0.3 0.11 11.8 0.3 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 AID28077.1 - 0.092 11.6 0.2 0.14 10.9 0.2 1.3 1 0 0 1 1 1 0 Tryptophan halogenase LysR_substrate PF03466.20 AID28078.1 - 2.2e-37 128.4 7.9 3.3e-37 127.9 7.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28078.1 - 5.1e-19 68.0 0.4 1.3e-18 66.7 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family P22_Cro PF14549.6 AID28078.1 - 0.2 11.5 0.0 0.47 10.3 0.0 1.6 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Hydantoinase_A PF01968.18 AID28079.1 - 2.1e-94 316.1 1.2 1.8e-93 313.0 0.8 2.3 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 AID28079.1 - 1.2e-47 161.9 0.0 2.1e-46 157.9 0.0 2.2 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_B PF02538.14 AID28080.1 - 5.6e-138 460.6 0.9 6.7e-138 460.3 0.9 1.1 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Fer2_4 PF13510.6 AID28081.1 - 6e-23 80.7 0.0 6.9e-23 80.5 0.0 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Pyr_redox_2 PF07992.14 AID28082.1 - 2.5e-16 59.8 0.1 4.5e-16 59.0 0.1 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28082.1 - 9.7e-08 32.1 0.2 9.7e-08 32.1 0.2 2.5 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID28082.1 - 4.6e-07 29.4 0.1 1.2e-05 24.8 0.3 2.5 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer2_BFD PF04324.15 AID28082.1 - 1.3e-06 28.6 1.0 2.9e-06 27.5 1.0 1.6 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain SO_alpha_A3 PF17806.1 AID28082.1 - 2.5e-05 24.5 0.0 5.3e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain FAD_oxidored PF12831.7 AID28082.1 - 4.8e-05 22.9 1.6 7.1e-05 22.3 1.6 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID28082.1 - 0.00017 20.8 1.4 0.00017 20.8 1.4 2.0 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 AID28082.1 - 0.00046 19.0 0.7 0.00081 18.2 0.7 1.4 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.19 AID28082.1 - 0.00098 18.5 1.2 0.0039 16.5 1.3 1.9 2 0 0 2 2 2 1 FAD binding domain ApbA PF02558.16 AID28082.1 - 0.0098 15.5 0.3 3.4 7.3 0.0 2.6 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 AID28082.1 - 0.015 15.3 2.1 0.25 11.3 0.4 2.4 1 1 0 2 2 2 0 FAD-NAD(P)-binding Thi4 PF01946.17 AID28082.1 - 0.019 14.2 0.8 0.026 13.8 0.1 1.5 2 0 0 2 2 2 0 Thi4 family Pyr_redox PF00070.27 AID28082.1 - 0.03 14.9 0.3 0.15 12.6 0.4 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 AID28082.1 - 0.037 13.3 1.4 0.94 8.7 0.0 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase GIDA PF01134.22 AID28082.1 - 0.052 12.6 0.7 0.099 11.7 0.7 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 AID28082.1 - 0.12 12.9 0.1 0.59 10.6 0.0 2.0 2 0 0 2 2 2 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 AID28082.1 - 0.15 12.1 0.4 2.5 8.2 0.0 2.2 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.12 AID28082.1 - 0.2 10.7 3.2 0.22 10.5 1.4 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein DAO PF01266.24 AID28083.1 - 3.7e-68 230.7 6.1 5.9e-68 230.0 6.1 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID28083.1 - 2.2e-06 27.8 0.2 4.9e-06 26.7 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID28083.1 - 2.2e-06 27.3 0.0 7.1e-05 22.3 0.1 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 AID28083.1 - 1.7e-05 24.1 0.4 0.00027 20.1 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AID28083.1 - 4.3e-05 22.8 6.0 0.00029 20.0 6.0 2.0 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID28083.1 - 9.4e-05 21.8 0.0 0.00043 19.6 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28083.1 - 0.00015 20.6 1.8 0.0018 17.0 1.3 2.0 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 AID28083.1 - 0.00029 21.3 1.2 0.0051 17.3 1.8 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID28083.1 - 0.0012 18.1 0.2 0.0022 17.3 0.2 1.3 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 AID28083.1 - 0.0012 18.1 0.2 0.0022 17.3 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 AID28083.1 - 0.0044 16.3 0.0 0.0087 15.4 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 AID28083.1 - 0.0087 15.0 0.5 0.013 14.4 0.5 1.2 1 0 0 1 1 1 1 Tryptophan halogenase Pyr_redox_3 PF13738.6 AID28083.1 - 0.019 14.2 0.1 0.07 12.4 0.1 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 AID28083.1 - 0.023 14.4 0.1 0.036 13.7 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 AID28083.1 - 0.051 13.4 0.2 0.22 11.4 0.1 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HTH_24 PF13412.6 AID28085.1 - 1.6e-19 69.2 0.1 2.9e-19 68.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID28085.1 - 2.2e-17 62.6 0.0 3.6e-17 61.9 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 AID28085.1 - 1.5e-15 56.9 0.2 2.4e-15 56.3 0.2 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR_2 PF12802.7 AID28085.1 - 0.00029 20.7 0.0 0.0006 19.6 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID28085.1 - 0.0021 18.0 0.0 0.0051 16.7 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 AID28085.1 - 0.036 14.2 0.0 0.074 13.2 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 AID28085.1 - 0.12 12.4 0.0 0.29 11.2 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 AID28085.1 - 0.16 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain LysR_substrate PF03466.20 AID28086.1 - 1.4e-24 86.6 1.9 2.2e-24 86.0 1.9 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28086.1 - 1.9e-19 69.4 0.7 3.1e-19 68.7 0.7 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID28086.1 - 0.0019 18.3 0.0 0.0078 16.3 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28086.1 - 0.078 12.9 0.1 0.22 11.4 0.1 1.8 1 0 0 1 1 1 0 MarR family HTH_Tnp_ISL3 PF13542.6 AID28086.1 - 0.13 11.7 0.0 0.26 10.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Oxidored_FMN PF00724.20 AID28087.1 - 1.8e-52 178.7 0.0 3e-52 178.0 0.0 1.4 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.14 AID28087.1 - 5.2e-09 35.8 4.2 1.2e-07 31.3 4.3 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID28087.1 - 8.5e-08 32.0 3.0 1.8e-07 30.9 3.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID28087.1 - 6.9e-07 29.7 1.4 7.2e-05 23.3 1.8 3.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28087.1 - 1.7e-06 28.1 2.2 6.7e-06 26.2 2.2 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID28087.1 - 4.4e-06 25.7 2.5 9.4e-06 24.6 2.5 1.5 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 AID28087.1 - 0.0002 20.6 1.1 0.00035 19.8 1.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 AID28087.1 - 0.00036 19.9 0.2 0.011 15.0 0.1 2.3 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID28087.1 - 0.00044 19.4 12.7 0.0007 18.8 5.7 3.0 2 1 1 3 3 3 1 FAD binding domain Dus PF01207.17 AID28087.1 - 0.00077 18.6 0.0 0.0015 17.7 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Thi4 PF01946.17 AID28087.1 - 0.0011 18.2 0.2 0.0027 17.0 0.2 1.6 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 AID28087.1 - 0.015 14.6 1.2 0.032 13.5 1.2 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 AID28087.1 - 0.018 14.3 5.3 0.043 13.1 1.9 2.1 2 0 0 2 2 2 0 FAD binding domain K_oxygenase PF13434.6 AID28087.1 - 0.26 10.4 0.1 1.3 8.1 0.1 1.9 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 AID28087.1 - 1.1 8.7 9.3 0.23 11.0 3.4 2.5 2 1 0 2 2 2 0 FAD dependent oxidoreductase HTH_24 PF13412.6 AID28088.1 - 2.1e-15 56.0 0.0 4e-15 55.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID28088.1 - 3.1e-15 55.7 0.0 6.9e-15 54.6 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 AID28088.1 - 3e-10 39.9 0.1 4.4e-10 39.4 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Imm74 PF15603.6 AID28088.1 - 0.092 12.9 0.1 0.51 10.6 0.0 2.0 2 0 0 2 2 2 0 Immunity protein 74 ABC_tran PF00005.27 AID28089.1 - 8.1e-55 185.1 0.0 3.6e-28 98.8 0.0 2.1 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28089.1 - 9.9e-13 48.6 0.2 0.009 15.9 0.0 4.1 4 0 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 AID28089.1 - 4.5e-11 43.1 0.2 0.00031 21.2 0.0 2.6 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 AID28089.1 - 5e-09 36.8 0.4 0.0035 17.8 0.1 2.5 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 AID28089.1 - 1.7e-08 34.2 0.4 1.3e-05 24.8 0.0 3.4 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID28089.1 - 6.5e-07 29.7 2.8 0.063 13.6 0.8 3.5 3 1 0 3 3 2 2 AAA domain AAA_25 PF13481.6 AID28089.1 - 6.7e-07 29.1 1.2 0.012 15.2 0.0 4.2 4 0 0 4 4 4 1 AAA domain AAA_29 PF13555.6 AID28089.1 - 2.3e-06 27.3 0.8 0.036 13.8 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA PF00004.29 AID28089.1 - 1e-05 26.0 0.3 0.36 11.3 0.0 3.3 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AID28089.1 - 5.4e-05 23.2 0.4 0.48 10.3 0.0 2.6 2 0 0 2 2 2 2 NACHT domain RsgA_GTPase PF03193.16 AID28089.1 - 5.5e-05 23.1 0.2 0.21 11.5 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase CbiA PF01656.23 AID28089.1 - 6.2e-05 23.1 0.1 0.0016 18.5 0.0 2.4 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.6 AID28089.1 - 9e-05 22.7 0.0 0.23 11.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 AID28089.1 - 9.8e-05 22.4 0.6 1.1 9.2 0.0 3.4 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID28089.1 - 0.00012 21.5 0.2 0.056 12.8 0.0 2.6 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 AID28089.1 - 0.00021 21.1 1.8 0.29 10.8 0.2 2.8 3 0 0 3 3 2 2 AAA domain IstB_IS21 PF01695.17 AID28089.1 - 0.00028 20.7 1.2 0.87 9.3 0.0 2.8 3 0 0 3 3 2 2 IstB-like ATP binding protein TniB PF05621.11 AID28089.1 - 0.00031 20.2 0.1 2.2 7.7 0.0 3.9 4 0 0 4 4 4 1 Bacterial TniB protein AAA_18 PF13238.6 AID28089.1 - 0.00052 20.6 0.0 1 9.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain ATP-synt_ab PF00006.25 AID28089.1 - 0.00055 19.7 0.1 0.18 11.4 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activat PF00158.26 AID28089.1 - 0.00074 19.3 0.2 0.32 10.7 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain PRK PF00485.18 AID28089.1 - 0.00077 19.3 0.6 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 AID28089.1 - 0.0013 18.4 3.1 0.085 12.6 0.0 3.0 2 2 0 2 2 2 1 AAA domain AAA_23 PF13476.6 AID28089.1 - 0.0014 19.1 1.7 1.7 9.1 0.0 2.6 3 0 0 3 3 2 2 AAA domain MMR_HSR1 PF01926.23 AID28089.1 - 0.0017 18.5 0.0 0.26 11.4 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase DUF87 PF01935.17 AID28089.1 - 0.0043 17.2 1.3 0.25 11.4 0.1 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain RNA_helicase PF00910.22 AID28089.1 - 0.0053 17.1 0.3 1.6 9.1 0.0 2.8 3 0 0 3 3 2 1 RNA helicase NB-ARC PF00931.22 AID28089.1 - 0.0055 15.9 2.1 1.1 8.4 0.1 2.2 2 0 0 2 2 2 2 NB-ARC domain AAA_7 PF12775.7 AID28089.1 - 0.0064 16.0 0.1 4 6.9 0.0 2.6 3 0 0 3 3 2 0 P-loop containing dynein motor region PduV-EutP PF10662.9 AID28089.1 - 0.0068 16.2 0.2 4.9 6.9 0.1 2.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_28 PF13521.6 AID28089.1 - 0.0072 16.6 0.5 18 5.6 0.0 3.6 3 0 0 3 3 3 0 AAA domain Roc PF08477.13 AID28089.1 - 0.01 16.1 0.1 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Rad17 PF03215.15 AID28089.1 - 0.01 15.8 0.0 0.22 11.4 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain PhoH PF02562.16 AID28089.1 - 0.01 15.3 1.4 0.99 8.8 0.1 2.7 3 0 0 3 3 3 0 PhoH-like protein G-alpha PF00503.20 AID28089.1 - 0.015 14.5 0.0 0.59 9.2 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit AAA_15 PF13175.6 AID28089.1 - 0.019 14.7 0.4 1.9 8.1 0.3 2.2 2 0 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 AID28089.1 - 0.025 14.7 0.0 4.1 7.5 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 AID28089.1 - 0.034 13.5 3.2 2.2 7.5 0.1 3.1 3 0 0 3 3 3 0 KaiC TsaE PF02367.17 AID28089.1 - 0.056 13.4 0.1 2.9 7.9 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 AID28089.1 - 0.091 12.0 2.8 0.19 10.9 0.4 2.1 2 0 0 2 2 2 0 TIP49 P-loop domain CoaE PF01121.20 AID28089.1 - 0.099 12.3 0.3 9.9 5.8 0.0 2.5 2 0 0 2 2 2 0 Dephospho-CoA kinase Hpr_kinase_C PF07475.12 AID28089.1 - 0.11 12.0 2.5 1.7 8.2 0.4 2.4 2 0 0 2 2 2 0 HPr Serine kinase C-terminal domain MobB PF03205.14 AID28089.1 - 0.12 12.3 0.2 8.1 6.3 0.0 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 AID28089.1 - 0.12 12.7 0.3 8.7 6.7 0.2 2.6 2 1 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 AID28089.1 - 0.12 11.8 0.9 0.64 9.4 0.1 2.1 2 0 0 2 2 2 0 Poxvirus A32 protein APS_kinase PF01583.20 AID28089.1 - 0.14 12.1 0.2 6.6 6.6 0.1 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase TrwB_AAD_bind PF10412.9 AID28089.1 - 0.16 10.9 0.6 4 6.3 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain BPD_transp_1 PF00528.22 AID28090.1 - 1.1e-23 83.9 13.2 1.1e-23 83.9 13.2 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID28090.1 - 0.0069 16.3 0.9 0.0069 16.3 0.9 3.6 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 AID28091.1 - 8.6e-32 110.4 17.4 8.6e-32 110.4 17.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID28092.1 - 1.5e-66 224.9 1.8 2.3e-66 224.3 1.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 AID28092.1 - 0.013 15.4 2.7 0.033 14.0 2.7 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence CytB6-F_Fe-S PF08802.10 AID28092.1 - 0.13 12.3 1.0 0.29 11.2 1.0 1.6 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit HAD_2 PF13419.6 AID28093.1 - 1.4e-05 25.3 0.0 4.7e-05 23.6 0.0 1.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID28093.1 - 0.027 14.8 0.1 0.5 10.6 0.1 2.2 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Aminotran_3 PF00202.21 AID28094.1 - 1.6e-91 307.0 0.0 2e-91 306.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PmbA_TldD PF01523.16 AID28094.1 - 0.05 13.4 0.0 8.1 6.2 0.0 2.2 2 0 0 2 2 2 0 Putative modulator of DNA gyrase Acetyltransf_18 PF18014.1 AID28095.1 - 1.2e-14 54.2 0.0 2.9e-14 53.0 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID28095.1 - 3.1e-10 40.3 0.0 7.9e-10 39.0 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID28095.1 - 1.3e-09 38.1 0.0 2.1e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID28095.1 - 1.3e-09 38.3 0.0 3.5e-09 36.9 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 AID28095.1 - 4.9e-06 26.6 0.0 0.002 18.2 0.0 2.6 2 1 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID28095.1 - 0.0027 17.8 0.0 0.0051 16.9 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 AID28095.1 - 0.012 15.5 0.0 0.032 14.2 0.0 1.7 1 0 0 1 1 1 0 FR47-like protein HAD_2 PF13419.6 AID28096.1 - 3.9e-10 40.1 0.0 1.8e-09 37.9 0.0 2.0 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID28096.1 - 0.032 14.5 0.0 0.8 10.0 0.0 2.1 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase TA0956 PF11513.8 AID28096.1 - 0.11 12.8 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 DAO PF01266.24 AID28097.1 - 2.1e-61 208.5 3.2 2.4e-61 208.3 3.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID28097.1 - 2.9e-10 39.9 1.6 1.8e-05 24.2 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID28097.1 - 2.7e-09 36.7 1.4 6.4e-08 32.2 1.5 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28097.1 - 2.5e-08 33.1 0.4 0.00024 19.9 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.6 AID28097.1 - 1.3e-06 28.5 3.0 1.7e-06 28.1 1.6 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 AID28097.1 - 5.3e-06 26.0 5.5 0.0019 17.6 2.0 2.3 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 AID28097.1 - 3.5e-05 23.8 2.6 0.13 12.2 0.6 2.2 2 0 0 2 2 2 2 FAD-NAD(P)-binding Thi4 PF01946.17 AID28097.1 - 9.3e-05 21.8 1.3 0.00019 20.8 1.3 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 AID28097.1 - 0.00037 19.7 10.7 0.0022 17.1 10.7 2.0 1 1 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 AID28097.1 - 0.00096 18.5 0.5 0.00096 18.5 0.5 1.5 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 AID28097.1 - 0.0024 18.4 0.6 0.0055 17.2 0.6 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID28097.1 - 0.0038 16.4 1.6 0.0038 16.4 1.6 2.0 2 1 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 AID28097.1 - 0.011 15.1 5.3 0.014 14.8 4.3 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 AID28097.1 - 0.03 13.6 2.1 0.06 12.6 2.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain adh_short PF00106.25 AID28097.1 - 0.087 12.3 0.1 0.15 11.5 0.1 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Lycopene_cycl PF05834.12 AID28097.1 - 0.11 11.5 1.4 0.13 11.2 0.4 1.6 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 AID28097.1 - 0.13 11.1 0.7 0.22 10.4 0.7 1.4 1 0 0 1 1 1 0 Tryptophan halogenase NAD_binding_7 PF13241.6 AID28097.1 - 0.19 12.2 0.1 0.35 11.3 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding adh_short_C2 PF13561.6 AID28097.1 - 0.29 10.6 3.4 1.1 8.7 3.4 1.9 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase F420_oxidored PF03807.17 AID28097.1 - 1.9 9.1 4.0 3.5 8.3 0.8 2.7 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Aldedh PF00171.22 AID28098.1 - 1.2e-149 498.8 0.8 3.2e-110 368.8 0.3 2.0 1 1 1 2 2 2 2 Aldehyde dehydrogenase family Iso_dh PF00180.20 AID28099.1 - 8.6e-86 288.2 0.0 1e-85 287.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aldedh PF00171.22 AID28100.1 - 1e-148 495.7 0.7 1.3e-148 495.4 0.7 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 AID28100.1 - 0.00092 18.7 0.0 0.0056 16.2 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1487) LuxC PF05893.14 AID28100.1 - 0.022 13.8 0.0 0.033 13.2 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Cupin_3 PF05899.12 AID28101.1 - 4.7e-24 83.9 1.2 5.8e-24 83.6 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID28101.1 - 9.5e-05 22.0 0.2 0.00015 21.4 0.2 1.4 1 0 0 1 1 1 1 Cupin domain 2-Hacid_dh_C PF02826.19 AID28102.1 - 7.7e-49 165.5 0.0 1e-48 165.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 AID28102.1 - 1.5e-05 25.3 0.0 2.4e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Peptidase_M20 PF01546.28 AID28103.1 - 1.4e-36 126.1 0.0 1.9e-36 125.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID28103.1 - 6.8e-21 74.2 0.0 1.1e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 AID28103.1 - 0.036 13.8 0.0 0.054 13.2 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M28 Acetyltransf_18 PF18014.1 AID28104.1 - 2.7e-17 62.7 0.0 6.8e-17 61.5 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID28104.1 - 6.5e-06 26.1 0.0 1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID28104.1 - 2.9e-05 24.3 0.0 5.5e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID28104.1 - 0.0051 17.2 0.0 0.014 15.8 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain HATPase_c PF02518.26 AID28105.1 - 4.5e-29 101.2 0.1 8.7e-29 100.3 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID28105.1 - 5.4e-27 94.2 2.4 1.4e-15 57.4 0.1 2.5 2 0 0 2 2 2 2 Response regulator receiver domain PAS_4 PF08448.10 AID28105.1 - 3.6e-20 72.3 0.0 1.4e-19 70.3 0.0 2.1 2 0 0 2 2 2 1 PAS fold HisKA PF00512.25 AID28105.1 - 5.3e-16 58.4 0.1 2.4e-15 56.3 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain 5TM-5TMR_LYT PF07694.12 AID28105.1 - 5.3e-12 45.6 20.2 9.1e-12 44.8 20.2 1.3 1 0 0 1 1 1 1 5TMR of 5TMR-LYT PAS PF00989.25 AID28105.1 - 1.3e-08 34.8 0.0 4.6e-08 33.0 0.0 2.0 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 AID28105.1 - 5.8e-08 32.9 0.0 1.8e-07 31.4 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_5 PF14501.6 AID28105.1 - 1.4e-06 28.2 0.0 3e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 GHKL domain PAS_3 PF08447.12 AID28105.1 - 0.00012 22.3 0.0 0.00039 20.6 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 AID28105.1 - 0.00014 21.8 0.0 0.00081 19.4 0.0 2.2 2 0 0 2 2 2 1 PAS domain HATPase_c_3 PF13589.6 AID28105.1 - 0.0011 18.8 0.0 0.0028 17.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID28106.1 - 6.4e-25 87.5 0.0 7.1e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.24 AID28107.1 - 1.1e-25 90.0 0.1 1.2e-25 89.8 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain B12-binding PF02310.19 AID28107.1 - 0.016 15.2 0.0 0.023 14.7 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain TPR_2 PF07719.17 AID28108.1 - 1.2e-29 100.0 3.9 0.00021 21.1 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_19 PF14559.6 AID28108.1 - 1.6e-26 92.6 19.8 7.7e-07 29.5 1.6 6.0 4 2 1 5 5 5 5 Tetratricopeptide repeat TPR_16 PF13432.6 AID28108.1 - 1.9e-25 89.2 39.6 1.3e-07 32.1 3.4 6.3 3 2 3 7 7 6 5 Tetratricopeptide repeat TPR_11 PF13414.6 AID28108.1 - 6.9e-24 83.3 5.8 4.5e-05 23.0 0.1 6.1 4 3 2 6 6 5 5 TPR repeat TPR_1 PF00515.28 AID28108.1 - 9.9e-24 82.1 1.3 0.0021 17.8 0.0 6.9 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_14 PF13428.6 AID28108.1 - 1.4e-21 75.3 31.1 0.00016 22.2 1.8 8.8 3 2 5 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 AID28108.1 - 1.2e-17 62.6 0.2 0.012 15.8 0.0 7.1 8 0 0 8 8 6 3 Tetratricopeptide repeat TPR_17 PF13431.6 AID28108.1 - 1e-13 50.6 1.6 0.0039 17.5 0.2 6.3 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID28108.1 - 2.5e-13 50.1 15.6 0.00039 20.6 1.2 6.3 5 1 2 7 7 7 5 Tetratricopeptide repeat TPR_7 PF13176.6 AID28108.1 - 2.7e-09 36.4 3.5 0.11 12.5 0.0 5.5 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.6 AID28108.1 - 2.6e-08 33.9 18.5 4.8e-05 23.4 4.1 4.1 2 2 3 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 AID28108.1 - 5.4e-08 32.8 0.1 7.2 6.8 0.0 6.1 6 1 0 6 6 6 1 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 AID28108.1 - 1.2e-07 31.9 10.3 0.011 16.3 0.0 6.4 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.6 AID28108.1 - 3.7e-07 29.6 7.1 0.019 14.2 0.2 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_MalT PF17874.1 AID28108.1 - 6.5e-06 25.7 1.3 0.55 9.5 0.0 3.5 2 1 1 3 3 3 2 MalT-like TPR region TPR_10 PF13374.6 AID28108.1 - 9.7e-06 25.3 16.5 0.87 9.5 0.7 6.9 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_21 PF09976.9 AID28108.1 - 0.0074 16.0 0.8 0.0074 16.0 0.8 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat-like domain HrpB1_HrpK PF09613.10 AID28108.1 - 0.019 14.6 1.9 11 5.6 0.0 3.4 2 2 2 4 4 4 0 Bacterial type III secretion protein (HrpB1_HrpK) TonB_dep_Rec PF00593.24 AID28108.1 - 0.36 10.7 6.8 1.4 8.7 6.8 1.9 1 1 0 1 1 1 0 TonB dependent receptor DUF2379 PF09543.10 AID28108.1 - 2.1 8.6 7.7 1.1 9.5 0.5 3.3 2 2 0 3 3 3 0 Protein of unknown function (DUF2379) HEAT_2 PF13646.6 AID28109.1 - 5e-21 74.9 23.6 1.1e-13 51.4 6.6 3.9 4 1 0 4 4 4 3 HEAT repeats HEAT PF02985.22 AID28109.1 - 2.6e-13 49.0 13.1 0.0034 17.5 0.1 5.6 5 0 0 5 5 5 5 HEAT repeat HEAT_EZ PF13513.6 AID28109.1 - 0.0016 18.9 26.6 1 9.9 5.3 6.7 4 3 1 5 5 5 2 HEAT-like repeat DNA_alkylation PF08713.11 AID28109.1 - 0.092 12.5 0.4 1.8 8.3 0.0 2.4 2 0 0 2 2 2 0 DNA alkylation repair enzyme HEAT_PBS PF03130.16 AID28109.1 - 0.13 13.0 31.6 2.3 9.1 0.2 6.6 6 0 0 6 6 6 0 PBS lyase HEAT-like repeat Glyco_tranf_2_3 PF13641.6 AID28110.1 - 1e-30 107.4 0.3 6.3e-29 101.5 0.3 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 AID28110.1 - 2.9e-20 72.8 0.1 2.7e-19 69.6 0.1 2.2 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 AID28110.1 - 8.5e-17 61.7 0.5 1.7e-16 60.7 0.5 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Chitin_synth_2 PF03142.15 AID28110.1 - 1.8e-06 26.9 0.0 0.0014 17.4 0.0 2.7 3 0 0 3 3 3 2 Chitin synthase Glyco_transf_21 PF13506.6 AID28110.1 - 4.8e-06 26.2 0.1 1.4e-05 24.7 0.1 1.8 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 AID28110.1 - 6e-05 22.7 0.7 0.041 13.4 0.2 2.9 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.14 AID28110.1 - 0.058 11.9 0.1 0.13 10.7 0.1 1.5 2 0 0 2 2 2 0 Cellulose synthase Hpt PF01627.23 AID28111.1 - 1.9e-12 47.2 0.2 2.2e-12 47.0 0.2 1.0 1 0 0 1 1 1 1 Hpt domain EspB_PE PF18625.1 AID28111.1 - 0.056 13.9 0.1 0.95 10.0 0.1 2.0 2 0 0 2 2 2 0 ESX-1 secreted protein B PE domain DUF1328 PF07043.13 AID28111.1 - 0.15 12.3 0.5 0.25 11.6 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1328) DNA_ligase_A_M PF01068.21 AID28112.1 - 3.4e-20 72.6 0.0 6.9e-20 71.6 0.0 1.5 1 1 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 AID28112.1 - 0.028 14.7 0.0 0.037 14.3 0.0 1.3 1 0 0 1 1 1 0 RNA ligase mRNA_cap_enzyme PF01331.19 AID28112.1 - 0.18 11.6 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain STAS PF01740.21 AID28113.1 - 0.11 12.1 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 STAS domain HATPase_c PF02518.26 AID28114.1 - 0.0037 17.8 0.0 0.0054 17.2 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID28114.1 - 0.011 15.7 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SpoIIE PF07228.12 AID28115.1 - 3.2e-40 138.1 0.8 6.6e-40 137.1 0.8 1.6 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) HAMP PF00672.25 AID28115.1 - 7.6e-11 42.2 0.1 2.1e-10 40.8 0.1 1.8 1 0 0 1 1 1 1 HAMP domain dCache_1 PF02743.18 AID28115.1 - 2.1e-08 34.3 0.1 6.2e-08 32.7 0.0 1.9 2 0 0 2 2 2 1 Cache domain Methyltransf_25 PF13649.6 AID28116.1 - 1.6e-15 57.6 0.0 4.2e-15 56.2 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID28116.1 - 2e-15 57.2 0.0 3.6e-15 56.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID28116.1 - 3.8e-15 55.9 0.0 5.4e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 AID28116.1 - 2.3e-13 50.2 0.0 3.3e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID28116.1 - 8.8e-10 39.2 0.0 1.8e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID28116.1 - 6.2e-09 35.9 0.0 1.2e-08 35.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID28116.1 - 4.2e-05 23.2 0.0 6.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 AID28116.1 - 0.00036 20.3 0.0 0.002 17.9 0.0 2.0 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_4 PF02390.17 AID28116.1 - 0.0013 18.3 0.0 0.0023 17.4 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase MetW PF07021.12 AID28116.1 - 0.0054 16.3 0.0 0.0091 15.6 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 AID28116.1 - 0.061 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CheR PF01739.18 AID28116.1 - 0.11 12.0 0.0 0.79 9.2 0.0 2.0 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_8 PF05148.15 AID28116.1 - 0.15 11.9 0.0 0.45 10.3 0.0 1.8 1 1 0 1 1 1 0 Hypothetical methyltransferase EAL PF00563.20 AID28118.1 - 1.5e-70 237.4 0.0 2.5e-70 236.7 0.0 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID28118.1 - 9.2e-44 149.0 0.0 1.4e-43 148.4 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain ParD_antitoxin PF03693.14 AID28118.1 - 0.17 12.4 0.1 0.54 10.7 0.1 1.8 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HTH_18 PF12833.7 AID28119.1 - 1.6e-15 57.1 0.3 3e-15 56.2 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding_2 PF14525.6 AID28119.1 - 4.4e-11 42.8 0.4 1e-10 41.6 0.4 1.6 1 0 0 1 1 1 1 AraC-binding-like domain HTH_AraC PF00165.23 AID28119.1 - 3.1e-10 39.9 0.1 7.1e-08 32.4 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family IclR PF01614.18 AID28122.1 - 1.6e-19 70.0 0.0 2.7e-19 69.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 AID28122.1 - 5.8e-12 45.2 1.6 8.9e-12 44.6 0.7 1.8 2 0 0 2 2 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 AID28122.1 - 1.7e-06 27.8 0.7 3.5e-06 26.8 0.7 1.4 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 AID28122.1 - 0.00011 21.8 0.2 0.00033 20.4 0.2 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.12 AID28122.1 - 0.00041 20.2 0.2 0.00087 19.2 0.2 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 AID28122.1 - 0.00051 20.3 0.2 0.0011 19.3 0.2 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 AID28122.1 - 0.00058 19.4 0.1 0.0011 18.5 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 AID28122.1 - 0.004 16.9 0.0 0.012 15.3 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 AID28122.1 - 0.004 17.2 0.1 0.0091 16.0 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID28122.1 - 0.0071 15.8 0.2 0.027 14.0 0.1 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 AID28122.1 - 0.0099 15.9 1.3 0.017 15.1 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn helix HTH_Crp_2 PF13545.6 AID28122.1 - 0.012 15.6 0.3 0.03 14.3 0.3 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_7 PF02796.15 AID28122.1 - 0.013 15.5 0.0 0.032 14.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 AID28122.1 - 0.018 15.2 0.1 0.06 13.5 0.1 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 AID28122.1 - 0.018 14.9 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_3 PF01381.22 AID28122.1 - 0.076 13.1 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix RPA_C PF08784.11 AID28122.1 - 0.17 12.6 0.1 0.47 11.1 0.0 1.7 2 0 0 2 2 1 0 Replication protein A C terminal DUF2285 PF10074.9 AID28122.1 - 0.26 11.9 1.8 0.4 11.3 0.2 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2285) Cyclase PF04199.13 AID28123.1 - 1.9e-31 109.1 0.1 2.9e-31 108.5 0.1 1.3 1 0 0 1 1 1 1 Putative cyclase Cupin_2 PF07883.11 AID28124.1 - 1.9e-06 27.5 0.0 2.4e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 AID28124.1 - 0.068 12.9 0.1 0.09 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) adh_short_C2 PF13561.6 AID28125.1 - 2.9e-46 157.9 2.5 3.4e-46 157.7 2.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28125.1 - 1.3e-39 135.7 3.1 1.6e-39 135.4 3.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28125.1 - 1.2e-13 51.3 4.2 1.7e-13 50.9 4.2 1.1 1 0 0 1 1 1 1 KR domain AdoHcyase_NAD PF00670.21 AID28125.1 - 0.39 10.8 5.2 0.97 9.5 1.1 2.6 2 1 1 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 3HCDH_N PF02737.18 AID28126.1 - 2.4e-51 174.2 0.2 5.3e-51 173.0 0.2 1.6 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 AID28126.1 - 6.4e-21 74.8 0.0 1.5e-20 73.6 0.0 1.6 2 0 0 2 2 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 AID28126.1 - 2.2e-08 34.2 0.0 3.7e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 AID28126.1 - 1.9e-07 31.4 0.1 3.6e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 AID28126.1 - 0.0001 22.8 0.8 0.00029 21.4 0.8 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 AID28126.1 - 0.0002 21.0 0.1 0.00033 20.3 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.27 AID28126.1 - 0.00021 21.8 0.2 0.0004 20.9 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 AID28126.1 - 0.00046 19.6 1.9 0.00071 18.9 1.9 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 AID28126.1 - 0.00065 19.0 0.1 0.0011 18.3 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NmrA PF05368.13 AID28126.1 - 0.0023 17.5 0.6 0.0034 17.0 0.6 1.2 1 0 0 1 1 1 1 NmrA-like family 2-Hacid_dh_C PF02826.19 AID28126.1 - 0.003 16.9 1.2 0.05 13.0 1.2 2.2 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 AID28126.1 - 0.0031 17.7 0.2 0.0071 16.5 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID28126.1 - 0.0083 15.4 0.3 0.011 15.0 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain OCD_Mu_crystall PF02423.15 AID28126.1 - 0.021 13.8 0.2 0.032 13.2 0.2 1.2 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family CbiA PF01656.23 AID28126.1 - 0.022 14.8 0.0 0.036 14.1 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TrkA_N PF02254.18 AID28126.1 - 0.031 14.5 0.3 0.093 13.0 0.2 1.7 1 1 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 AID28126.1 - 0.034 14.4 0.2 0.056 13.7 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Rossmann-like PF10727.9 AID28126.1 - 0.062 13.2 3.4 0.056 13.3 1.5 2.0 2 1 0 2 2 2 0 Rossmann-like domain Shikimate_DH PF01488.20 AID28126.1 - 0.072 13.2 1.3 0.33 11.0 1.3 2.0 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 AID28126.1 - 0.081 12.6 0.4 0.17 11.5 0.3 1.6 2 0 0 2 2 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 AID28126.1 - 0.17 12.3 0.2 0.35 11.3 0.2 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Peripla_BP_6 PF13458.6 AID28127.1 - 5.4e-37 128.2 3.2 6.9e-37 127.9 3.2 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID28127.1 - 1.7e-07 30.5 0.0 0.00038 19.6 0.0 2.1 2 0 0 2 2 2 2 Periplasmic binding protein domain TAT_signal PF10518.9 AID28127.1 - 7.3e-05 22.4 1.0 7.3e-05 22.4 1.0 2.2 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence ANF_receptor PF01094.28 AID28127.1 - 0.00015 21.0 0.0 0.00027 20.2 0.0 1.3 1 0 0 1 1 1 1 Receptor family ligand binding region ABC_tran PF00005.27 AID28128.1 - 1.7e-26 93.4 0.0 2.1e-26 93.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID28128.1 - 3.9e-05 23.5 0.0 8.7e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter NTPase_1 PF03266.15 AID28128.1 - 0.00074 19.5 0.1 1 9.2 0.0 2.1 2 0 0 2 2 2 2 NTPase AAA_23 PF13476.6 AID28128.1 - 0.00097 19.7 0.6 0.0016 19.0 0.6 1.3 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 AID28128.1 - 0.001 19.0 0.3 0.0022 17.9 0.1 1.6 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 AID28128.1 - 0.0015 18.9 0.0 0.017 15.5 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID28128.1 - 0.0054 17.0 0.1 0.022 15.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28128.1 - 0.0089 15.7 0.1 0.016 14.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 AID28128.1 - 0.009 16.1 0.0 0.013 15.6 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID28128.1 - 0.045 13.6 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 AID28128.1 - 0.053 13.6 0.0 0.43 10.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 AID28128.1 - 0.058 13.6 0.1 0.18 12.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID28128.1 - 0.06 13.7 0.1 0.091 13.1 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AID28128.1 - 0.064 13.0 2.4 0.31 10.7 2.4 1.9 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 AID28128.1 - 0.16 11.4 0.4 0.55 9.6 0.1 1.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 AID28128.1 - 0.17 11.6 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 AID28129.1 - 1.1e-26 94.0 0.0 1.6e-26 93.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28129.1 - 2.3e-10 40.8 0.1 5.2e-06 26.5 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID28129.1 - 4.9e-05 23.0 0.1 9.1e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28129.1 - 0.00011 22.7 0.1 0.00016 22.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID28129.1 - 0.0013 18.2 0.0 0.044 13.2 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID28129.1 - 0.0036 17.1 0.0 0.005 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 AID28129.1 - 0.0045 16.6 0.0 0.0077 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain MukB PF04310.12 AID28129.1 - 0.01 15.7 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 MukB N-terminal AAA_22 PF13401.6 AID28129.1 - 0.018 15.3 0.0 0.14 12.4 0.0 2.1 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID28129.1 - 0.026 13.9 0.2 0.093 12.1 0.1 2.0 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.23 AID28129.1 - 0.028 14.5 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID28129.1 - 0.033 14.1 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 AID28129.1 - 0.074 13.4 0.1 0.11 12.8 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AID28129.1 - 0.09 12.5 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID28129.1 - 0.15 11.6 1.5 0.32 10.6 0.4 1.9 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 AID28129.1 - 0.17 12.1 0.3 0.29 11.4 0.3 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID28129.1 - 0.18 11.7 0.1 0.28 11.1 0.1 1.3 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 AID28129.1 - 1.1 8.0 2.7 1.7 7.3 0.9 2.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class BPD_transp_2 PF02653.16 AID28130.1 - 3e-26 92.2 37.3 3.5e-26 92.0 37.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28131.1 - 4.7e-30 104.7 41.6 4.7e-30 104.7 41.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Pam17 PF08566.10 AID28131.1 - 0.091 12.6 0.6 0.2 11.5 0.6 1.5 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 YqjK PF13997.6 AID28131.1 - 5.2 7.4 6.9 1.3 9.4 0.1 3.1 3 0 0 3 3 3 0 YqjK-like protein BKACE PF05853.12 AID28132.1 - 4.1e-64 216.5 0.0 4.6e-64 216.4 0.0 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme GntR PF00392.21 AID28133.1 - 5.5e-21 74.0 1.8 6e-12 45.0 0.3 3.3 3 0 0 3 3 3 2 Bacterial regulatory proteins, gntR family TrmB PF01978.19 AID28133.1 - 1.7e-10 40.6 0.0 0.00036 20.4 0.0 2.9 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 AID28133.1 - 5.5e-09 35.8 2.4 0.0083 16.0 0.1 3.8 3 0 0 3 3 3 2 MarR family HTH_Crp_2 PF13545.6 AID28133.1 - 3.3e-08 33.4 0.2 0.0039 17.2 0.0 2.8 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain MarR PF01047.22 AID28133.1 - 1.2e-07 31.5 1.5 0.0097 15.8 0.0 3.4 3 0 0 3 3 3 2 MarR family FCD PF07729.12 AID28133.1 - 2.7e-07 31.1 0.8 4.6e-07 30.3 0.8 1.4 1 0 0 1 1 1 1 FCD domain HTH_24 PF13412.6 AID28133.1 - 6.1e-07 28.9 2.3 0.0098 15.4 0.0 2.9 3 0 0 3 3 2 2 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 AID28133.1 - 1.4e-06 28.4 0.0 0.011 15.9 0.0 2.5 2 0 0 2 2 2 2 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 AID28133.1 - 2.2e-06 27.9 0.2 0.016 15.5 0.1 2.7 2 0 0 2 2 2 2 Transcriptional regulator HTH_11 PF08279.12 AID28133.1 - 5.6e-06 26.2 0.0 0.045 13.7 0.1 3.4 3 0 0 3 3 3 2 HTH domain HTH_IclR PF09339.10 AID28133.1 - 1.3e-05 24.9 0.1 0.039 13.7 0.0 2.8 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_29 PF13551.6 AID28133.1 - 5.2e-05 23.2 1.4 0.046 13.8 0.0 3.0 3 0 0 3 3 3 2 Winged helix-turn helix HTH_28 PF13518.6 AID28133.1 - 9.3e-05 22.5 2.2 0.12 12.6 0.0 3.4 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_5 PF01022.20 AID28133.1 - 0.00013 21.8 0.1 0.21 11.5 0.0 2.9 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_DeoR PF08220.12 AID28133.1 - 0.00043 20.0 0.5 0.46 10.3 0.2 2.5 2 0 0 2 2 2 2 DeoR-like helix-turn-helix domain DUF4423 PF14394.6 AID28133.1 - 0.0016 18.2 0.2 0.56 9.9 0.0 3.0 3 0 0 3 3 3 1 Domain of unknown function (DUF4423) PadR PF03551.14 AID28133.1 - 0.0032 17.4 0.0 0.87 9.6 0.0 2.6 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 AID28133.1 - 0.0049 17.3 0.1 9.2 6.8 0.0 3.1 3 0 0 3 3 3 0 Winged helix DNA-binding domain PaaX PF07848.12 AID28133.1 - 0.006 16.8 3.6 0.11 12.7 0.1 3.2 4 0 0 4 4 3 1 PaaX-like protein HTH_23 PF13384.6 AID28133.1 - 0.0073 16.1 0.3 2.6 7.9 0.0 2.8 3 0 0 3 3 2 1 Homeodomain-like domain Replic_Relax PF13814.6 AID28133.1 - 0.0092 16.1 0.1 1.3 9.0 0.0 2.3 2 0 0 2 2 2 1 Replication-relaxation DUF2250 PF10007.9 AID28133.1 - 0.0098 16.0 0.0 1.8 8.8 0.0 2.7 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 AID28133.1 - 0.021 14.7 0.0 1 9.3 0.0 2.6 2 0 0 2 2 2 0 TFIIE alpha subunit Ribosomal_S19e PF01090.19 AID28133.1 - 0.027 14.1 0.0 6.5 6.5 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein S19e BLACT_WH PF17778.1 AID28133.1 - 0.041 13.9 0.6 7.7 6.6 0.2 2.7 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain FaeA PF04703.12 AID28133.1 - 0.072 13.5 0.0 2.6 8.5 0.0 2.5 2 0 0 2 2 2 0 FaeA-like protein FeoC PF09012.10 AID28133.1 - 0.092 12.8 0.3 0.27 11.3 0.0 1.9 2 0 0 2 2 1 0 FeoC like transcriptional regulator HTH_Tnp_ISL3 PF13542.6 AID28133.1 - 0.75 9.3 4.5 6.9 6.2 0.2 3.0 3 0 0 3 3 2 0 Helix-turn-helix domain of transposase family ISL3 ABC_tran PF00005.27 AID28134.1 - 2.2e-30 106.0 0.0 3.3e-30 105.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 AID28134.1 - 0.011 16.1 0.1 0.022 15.1 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_21 PF13304.6 AID28134.1 - 0.021 14.7 0.9 0.18 11.6 0.1 2.2 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 AID28134.1 - 0.075 13.2 0.1 11 6.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID28134.1 - 0.19 11.6 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 NACHT domain BPD_transp_1 PF00528.22 AID28135.1 - 1.6e-12 47.6 24.1 1.6e-12 47.6 24.1 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28136.1 - 2e-15 57.0 14.1 2e-15 57.0 14.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component adh_short_C2 PF13561.6 AID28137.1 - 6.6e-59 199.3 4.8 8e-59 199.0 4.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28137.1 - 2e-55 187.3 4.4 2.3e-55 187.1 4.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28137.1 - 3.6e-12 46.5 5.2 4.7e-12 46.2 5.2 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID28137.1 - 0.0039 17.1 1.4 0.0063 16.4 0.9 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 AID28137.1 - 0.25 10.8 2.3 0.84 9.0 2.3 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family adh_short_C2 PF13561.6 AID28138.1 - 1.9e-66 224.0 6.0 2.2e-66 223.8 6.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28138.1 - 1.5e-54 184.5 1.1 1.9e-54 184.1 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28138.1 - 2.7e-12 47.0 1.6 4.7e-12 46.2 1.6 1.4 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28138.1 - 0.0028 17.2 0.7 0.0038 16.7 0.7 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 AID28138.1 - 0.048 13.7 0.8 0.087 12.9 0.6 1.5 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID28138.1 - 0.061 12.7 0.1 0.11 11.9 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SBP_bac_8 PF13416.6 AID28139.1 - 2.3e-12 47.3 10.5 3.4e-12 46.8 10.5 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28139.1 - 1.3e-09 37.9 3.5 1.8e-09 37.4 3.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 AID28139.1 - 0.033 14.0 0.9 0.033 14.0 0.9 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence ABC_tran PF00005.27 AID28140.1 - 8.6e-33 113.8 0.0 1.4e-32 113.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28140.1 - 0.00014 21.9 0.1 0.00058 20.0 0.1 2.1 1 1 1 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID28140.1 - 0.00059 19.7 0.0 0.54 10.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID28140.1 - 0.0025 18.1 0.6 0.013 15.8 0.6 1.9 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 AID28140.1 - 0.017 15.1 0.0 0.53 10.2 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA PF00004.29 AID28140.1 - 0.019 15.4 0.4 0.067 13.6 0.4 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID28140.1 - 0.025 14.5 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_16 PF13191.6 AID28140.1 - 0.041 14.3 0.1 0.096 13.1 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_17 PF13207.6 AID28140.1 - 0.042 14.3 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID28140.1 - 0.046 13.6 0.2 0.18 11.7 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 AID28140.1 - 0.055 14.0 0.4 0.12 12.8 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 AID28140.1 - 0.062 13.5 0.1 0.21 11.8 0.1 1.8 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 AID28140.1 - 0.097 12.1 0.3 0.6 9.5 0.1 1.9 2 0 0 2 2 2 0 Bacterial TniB protein AAA_30 PF13604.6 AID28140.1 - 0.12 12.1 0.2 1.8 8.3 0.0 2.4 3 0 0 3 3 3 0 AAA domain Polysacc_deac_1 PF01522.21 AID28141.1 - 4.9e-18 65.2 0.0 1.1e-17 64.1 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide deacetylase DUF2334 PF10096.9 AID28141.1 - 6.6e-07 29.2 0.0 9.5e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) DUF2194 PF09960.9 AID28141.1 - 0.065 11.6 0.0 0.08 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2194) cobW PF02492.19 AID28143.1 - 6.7e-42 143.1 0.0 1e-41 142.5 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 AID28143.1 - 2e-10 40.4 0.0 6.1e-10 38.9 0.0 1.9 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain SBP_bac_8 PF13416.6 AID28143.1 - 1.5e-07 31.5 0.1 2.6e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28143.1 - 7e-05 22.4 0.2 0.00012 21.5 0.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein RsgA_GTPase PF03193.16 AID28143.1 - 0.014 15.3 0.0 0.69 9.8 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase AAA_29 PF13555.6 AID28143.1 - 0.039 13.7 0.3 1.1 9.1 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_33 PF13671.6 AID28143.1 - 0.05 13.8 0.1 0.16 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AID28143.1 - 0.13 12.3 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRPRB PF09439.10 AID28143.1 - 0.17 11.3 0.0 0.3 10.5 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Amidase PF01425.21 AID28144.1 - 1.7e-83 281.1 1.5 3.5e-83 280.1 1.5 1.5 1 1 0 1 1 1 1 Amidase Cyclase PF04199.13 AID28145.1 - 6.1e-27 94.5 0.0 8.8e-27 94.0 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase AraC_binding_2 PF14525.6 AID28146.1 - 7.7e-25 87.5 0.3 1.2e-24 86.9 0.3 1.2 1 0 0 1 1 1 1 AraC-binding-like domain HTH_18 PF12833.7 AID28146.1 - 4.7e-20 71.6 0.0 1.2e-19 70.3 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID28146.1 - 2.3e-11 43.5 0.3 1.9e-07 31.0 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HD_4 PF13328.6 AID28146.1 - 0.14 11.9 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 HD domain Hydantoinase_A PF01968.18 AID28147.1 - 6.6e-84 281.6 2.4 2.8e-82 276.3 0.2 2.4 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 AID28147.1 - 6.2e-52 175.9 2.8 2.9e-50 170.4 0.6 2.5 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region BcrAD_BadFG PF01869.20 AID28147.1 - 0.042 13.3 0.1 2.2 7.7 0.0 2.9 2 2 1 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family MutL PF13941.6 AID28147.1 - 0.044 12.4 0.9 3.2 6.3 0.2 2.6 3 0 0 3 3 3 0 MutL protein Hydantoinase_B PF02538.14 AID28148.1 - 2.5e-149 498.0 0.2 3.1e-149 497.7 0.2 1.1 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase FAD_binding_5 PF00941.21 AID28149.1 - 6.5e-31 107.4 0.5 1e-30 106.7 0.5 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID28149.1 - 5.9e-05 23.2 1.3 0.00016 21.8 0.1 2.4 3 0 0 3 3 3 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 AID28150.1 - 7.4e-27 93.2 0.1 7.4e-27 93.2 0.1 1.7 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID28150.1 - 0.00045 20.1 1.0 0.00045 20.1 1.0 2.2 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID28150.1 - 0.0005 20.1 0.6 0.0005 20.1 0.6 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.18 AID28151.1 - 2.3e-124 415.8 7.6 3.3e-124 415.4 7.6 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID28151.1 - 1.3e-23 83.4 0.0 3.6e-23 82.0 0.0 1.8 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LamB_YcsF PF03746.16 AID28152.1 - 5.5e-56 189.9 0.0 6.6e-56 189.7 0.0 1.0 1 0 0 1 1 1 1 LamB/YcsF family PEP-utilizers PF00391.23 AID28152.1 - 0.025 14.3 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain LamB_YcsF PF03746.16 AID28153.1 - 6.2e-11 42.4 0.0 6.6e-11 42.3 0.0 1.0 1 0 0 1 1 1 1 LamB/YcsF family Aminotran_3 PF00202.21 AID28154.1 - 2.5e-88 296.5 0.0 3e-88 296.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Gag_spuma PF03276.14 AID28154.1 - 0.21 10.0 0.0 0.34 9.3 0.0 1.3 1 0 0 1 1 1 0 Spumavirus gag protein SnoaL_2 PF12680.7 AID28155.1 - 8.7e-24 84.1 0.9 1e-23 83.9 0.9 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 AID28155.1 - 5e-13 48.9 0.0 6.9e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase DUF4440 PF14534.6 AID28155.1 - 6.6e-09 36.1 0.1 8.5e-09 35.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_4 PF13577.6 AID28155.1 - 2.3e-05 24.5 0.2 3e-05 24.1 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 AID28155.1 - 0.00096 19.4 0.1 0.0012 19.1 0.1 1.2 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.20 AID28155.1 - 0.0095 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain Peripla_BP_6 PF13458.6 AID28156.1 - 1.9e-48 165.9 3.8 2.2e-48 165.7 3.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID28156.1 - 5e-16 58.6 0.1 8.2e-09 34.9 0.1 2.3 2 0 0 2 2 2 2 Periplasmic binding protein domain ANF_receptor PF01094.28 AID28156.1 - 0.0033 16.6 0.0 0.016 14.3 0.0 1.9 1 1 0 1 1 1 1 Receptor family ligand binding region NTP_transf_3 PF12804.7 AID28156.1 - 0.11 12.8 1.2 7.3 6.9 0.6 2.5 2 1 0 2 2 2 0 MobA-like NTP transferase domain BPD_transp_2 PF02653.16 AID28157.1 - 4.7e-28 98.1 42.5 4.7e-28 98.1 42.5 2.2 1 1 1 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28158.1 - 1.4e-38 132.6 42.0 1.7e-38 132.3 42.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28159.1 - 6.2e-27 94.8 0.0 8.2e-27 94.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28159.1 - 1.6e-11 44.5 0.1 5.5e-06 26.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID28159.1 - 3.1e-05 24.6 0.0 4.9e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28159.1 - 3.1e-05 23.6 0.0 7.3e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID28159.1 - 0.00017 22.0 0.0 0.00023 21.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 AID28159.1 - 0.00024 20.7 0.0 0.00045 19.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID28159.1 - 0.0009 18.7 0.0 0.0035 16.8 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID28159.1 - 0.0011 19.2 0.1 0.12 12.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID28159.1 - 0.0014 18.4 0.3 0.002 17.9 0.3 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID28159.1 - 0.008 16.1 0.1 0.019 14.8 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase ATPase_2 PF01637.18 AID28159.1 - 0.0089 16.0 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_15 PF13175.6 AID28159.1 - 0.017 14.9 0.0 0.091 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain NTPase_1 PF03266.15 AID28159.1 - 0.053 13.4 0.0 0.12 12.3 0.0 1.5 2 0 0 2 2 2 0 NTPase MutS_V PF00488.21 AID28159.1 - 0.065 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 MutS domain V PIF1 PF05970.14 AID28159.1 - 0.15 11.2 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase AAA PF00004.29 AID28159.1 - 0.17 12.3 0.0 0.3 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID28159.1 - 0.18 11.7 0.0 0.42 10.5 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain ABC_tran PF00005.27 AID28160.1 - 3.1e-26 92.5 0.0 4.1e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28160.1 - 0.00082 19.3 0.1 0.0013 18.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 AID28160.1 - 0.0011 18.8 0.1 0.0025 17.7 0.1 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter RsgA_GTPase PF03193.16 AID28160.1 - 0.0023 17.9 0.1 0.0035 17.3 0.1 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID28160.1 - 0.0028 18.2 0.1 0.004 17.7 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28160.1 - 0.01 15.5 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 AID28160.1 - 0.015 15.0 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 AID28160.1 - 0.017 15.2 0.1 0.037 14.1 0.1 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 AID28160.1 - 0.024 14.3 0.1 0.039 13.7 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID28160.1 - 0.026 14.9 0.1 0.036 14.5 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AID28160.1 - 0.15 12.3 0.0 0.45 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 AID28160.1 - 0.17 11.4 0.3 0.3 10.7 0.3 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 AID28160.1 - 0.23 11.5 0.1 0.57 10.2 0.0 1.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_13 PF13166.6 AID28160.1 - 0.25 9.9 0.0 0.32 9.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID28160.1 - 0.28 11.1 0.0 0.47 10.3 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain CT_A_B PF02626.15 AID28161.1 - 1.4e-87 293.7 0.0 1.7e-87 293.4 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain A and B CT_C_D PF02682.16 AID28162.1 - 8.7e-45 152.9 0.0 1.2e-44 152.5 0.0 1.1 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D LEM PF03020.15 AID28162.1 - 0.15 11.7 0.2 0.39 10.3 0.1 1.7 2 0 0 2 2 2 0 LEM domain CPSase_L_D2 PF02786.17 AID28163.1 - 1e-71 240.8 0.1 1.6e-71 240.2 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AID28163.1 - 7e-44 148.9 2.1 2.2e-43 147.3 0.1 2.5 3 0 0 3 3 3 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AID28163.1 - 2.7e-38 130.4 0.0 6.5e-38 129.2 0.0 1.7 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 AID28163.1 - 5.1e-07 29.4 0.0 3.4e-06 26.7 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 AID28163.1 - 3.6e-05 23.4 0.3 0.00012 21.8 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 AID28163.1 - 0.0022 18.1 0.0 0.0035 17.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Biotin_lipoyl PF00364.22 AID28164.1 - 3e-11 43.0 0.0 3.3e-11 42.8 0.0 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme LamB_YcsF PF03746.16 AID28165.1 - 6.4e-90 301.0 0.4 7.2e-90 300.8 0.4 1.0 1 0 0 1 1 1 1 LamB/YcsF family LysR_substrate PF03466.20 AID28166.1 - 4.8e-40 137.2 4.7 1.1e-39 136.0 2.4 1.9 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID28166.1 - 5e-19 68.0 2.0 6.8e-19 67.6 0.6 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID28166.1 - 0.019 14.8 0.4 0.064 13.1 0.1 2.0 2 0 0 2 2 2 0 MarR family HTH_24 PF13412.6 AID28166.1 - 0.17 11.5 0.0 0.46 10.1 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Transposase_mut PF00872.18 AID28167.1 - 2.7e-56 191.1 0.0 3.3e-56 190.8 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family Aldedh PF00171.22 AID28168.1 - 2.7e-104 349.3 1.2 3.2e-104 349.0 1.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family FCD PF07729.12 AID28169.1 - 4.4e-24 85.3 8.8 1.2e-23 83.9 8.8 1.7 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28169.1 - 4.6e-16 58.2 0.3 1e-15 57.1 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family BPD_transp_2 PF02653.16 AID28170.1 - 1.3e-44 152.4 49.6 1.3e-44 152.4 49.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ATP_synth_reg PF14960.6 AID28170.1 - 0.027 13.9 2.2 0.089 12.3 2.2 1.9 1 0 0 1 1 1 0 ATP synthase regulation ABC_tran PF00005.27 AID28171.1 - 4.7e-49 166.4 0.0 9.9e-26 90.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28171.1 - 3.5e-11 43.5 0.0 0.0034 17.3 0.0 3.1 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28171.1 - 4.5e-05 23.0 0.0 0.034 13.6 0.0 3.1 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28171.1 - 0.00035 20.3 0.0 0.003 17.3 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID28171.1 - 0.0021 16.9 0.3 5.2 5.7 0.0 3.6 3 1 0 3 3 3 2 Predicted ATPase of the ABC class AAA_23 PF13476.6 AID28171.1 - 0.0022 18.5 0.0 0.0037 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID28171.1 - 0.0063 16.3 0.0 0.01 15.6 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID28171.1 - 0.0099 15.8 0.0 0.35 10.8 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase TsaE PF02367.17 AID28171.1 - 0.023 14.7 0.1 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 AID28171.1 - 0.025 15.0 0.4 0.34 11.3 0.0 2.6 2 2 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 AID28171.1 - 0.051 13.3 0.9 0.26 11.0 0.0 2.4 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID28171.1 - 0.052 13.6 0.4 4.1 7.5 0.0 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase SbcCD_C PF13558.6 AID28171.1 - 0.086 13.1 0.1 25 5.2 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MukB PF04310.12 AID28171.1 - 0.089 12.6 0.1 0.41 10.4 0.1 1.9 2 0 0 2 2 2 0 MukB N-terminal AAA_22 PF13401.6 AID28171.1 - 0.099 12.9 0.8 1.1 9.6 0.0 2.8 4 0 0 4 4 4 0 AAA domain Zeta_toxin PF06414.12 AID28171.1 - 0.11 11.7 0.3 3 7.1 0.1 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_5 PF07728.14 AID28171.1 - 0.13 12.3 0.2 14 5.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF2813 PF11398.8 AID28171.1 - 0.16 11.2 0.0 2.6 7.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) Peripla_BP_4 PF13407.6 AID28172.1 - 2.4e-28 99.4 7.0 3e-28 99.1 7.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28172.1 - 4.9e-18 65.5 0.1 6.1e-18 65.2 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family ABC_sub_bind PF04392.12 AID28172.1 - 0.00079 18.8 0.4 0.0013 18.0 0.4 1.4 1 0 0 1 1 1 1 ABC transporter substrate binding protein adh_short_C2 PF13561.6 AID28173.1 - 3.1e-66 223.3 0.5 3.6e-66 223.1 0.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28173.1 - 4.5e-57 192.7 0.7 5.6e-57 192.4 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28173.1 - 3.4e-10 40.1 0.3 4.3e-10 39.8 0.3 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28173.1 - 0.00037 20.0 0.2 0.00064 19.3 0.2 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Chorion_1 PF01723.16 AID28173.1 - 0.046 13.7 1.7 0.078 12.9 1.7 1.3 1 0 0 1 1 1 0 Chorion protein EccE PF11203.8 AID28173.1 - 0.093 13.1 1.0 1.3 9.4 0.8 2.2 2 0 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE ZnuA PF01297.17 AID28173.1 - 0.13 11.6 0.2 0.19 11.1 0.2 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic MR_MLE_C PF13378.6 AID28174.1 - 6.3e-55 186.1 0.6 8.7e-55 185.7 0.6 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28174.1 - 2.8e-20 72.7 0.0 6e-20 71.6 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YdjM PF04307.14 AID28174.1 - 0.032 13.5 0.0 0.063 12.6 0.0 1.4 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Epimerase PF01370.21 AID28175.1 - 3.9e-20 72.3 0.2 3.2e-19 69.4 0.2 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28175.1 - 2.6e-13 50.1 0.1 4.5e-12 46.0 0.1 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID28175.1 - 1.3e-10 40.9 0.0 1.7e-08 33.9 0.0 2.1 2 0 0 2 2 2 2 Male sterility protein 3Beta_HSD PF01073.19 AID28175.1 - 3e-09 36.3 0.0 2e-08 33.6 0.0 1.9 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID28175.1 - 7.4e-09 35.1 0.0 2.1e-08 33.6 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID28175.1 - 1.2e-07 31.1 0.2 0.004 16.3 0.2 3.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 AID28175.1 - 5.2e-07 29.7 0.0 9e-07 29.0 0.0 1.4 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AID28175.1 - 0.036 13.6 0.2 0.12 11.9 0.0 1.8 2 0 0 2 2 2 0 NmrA-like family MR_MLE_C PF13378.6 AID28176.1 - 7e-63 212.1 0.2 8.7e-63 211.8 0.2 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28176.1 - 2.6e-14 53.4 0.1 4.8e-14 52.6 0.1 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aldo_ket_red PF00248.21 AID28177.1 - 4.3e-76 255.9 0.0 4.9e-76 255.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family FCD PF07729.12 AID28178.1 - 3.5e-23 82.4 11.0 6e-23 81.6 11.0 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28178.1 - 1e-09 37.9 2.2 1.7e-09 37.2 0.8 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 AID28178.1 - 0.0057 16.5 0.1 0.15 11.9 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FadR_C PF07840.12 AID28178.1 - 0.014 15.3 0.1 0.025 14.5 0.1 1.4 1 1 0 1 1 1 0 FadR C-terminal domain HTH_12 PF08461.10 AID28178.1 - 0.065 13.2 0.4 0.17 11.8 0.4 1.7 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain SBP_bac_1 PF01547.25 AID28179.1 - 3.4e-27 96.2 5.5 4.7e-27 95.8 5.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID28179.1 - 2.2e-26 93.3 2.9 3e-26 92.9 2.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 AID28179.1 - 0.00093 18.9 2.9 0.0019 17.9 2.9 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 AID28180.1 - 1e-19 71.0 15.7 1e-19 71.0 15.7 1.8 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28181.1 - 3.1e-17 62.9 20.7 3.1e-17 62.9 20.7 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component RraA-like PF03737.15 AID28182.1 - 2.9e-34 118.4 0.1 3.6e-34 118.1 0.1 1.1 1 0 0 1 1 1 1 Aldolase/RraA ABC_tran PF00005.27 AID28183.1 - 2e-30 106.1 0.0 3.3e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID28183.1 - 5.7e-11 43.1 0.3 2e-10 41.3 0.3 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 AID28183.1 - 1.1e-07 31.9 0.0 0.0015 18.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CysA_C_terminal PF17850.1 AID28183.1 - 1.2e-07 32.2 0.9 6.8e-07 29.8 0.5 2.3 2 0 0 2 2 2 1 CysA C-terminal regulatory domain RsgA_GTPase PF03193.16 AID28183.1 - 1.2e-06 28.5 0.1 2.5e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase TOBE_2 PF08402.10 AID28183.1 - 2.2e-05 24.6 0.1 7.1e-05 22.9 0.1 2.0 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.19 AID28183.1 - 5e-05 22.8 0.0 0.00058 19.4 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID28183.1 - 7.1e-05 23.3 0.1 0.00012 22.5 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID28183.1 - 0.00073 19.8 0.0 0.0014 18.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID28183.1 - 0.0016 19.0 0.0 0.0028 18.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain TOBE PF03459.17 AID28183.1 - 0.0019 18.5 1.0 0.0041 17.4 0.1 2.1 2 0 0 2 2 1 1 TOBE domain AAA_29 PF13555.6 AID28183.1 - 0.0021 17.8 0.0 0.0044 16.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 AID28183.1 - 0.0029 17.5 0.3 0.035 14.0 0.0 2.5 3 0 0 3 3 3 1 NACHT domain AAA_30 PF13604.6 AID28183.1 - 0.004 16.9 0.0 0.0098 15.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 AID28183.1 - 0.0061 16.8 0.0 0.012 15.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID28183.1 - 0.0062 17.0 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID28183.1 - 0.0075 16.2 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_15 PF13175.6 AID28183.1 - 0.012 15.3 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 AID28183.1 - 0.019 15.2 0.3 0.042 14.0 0.3 1.8 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID28183.1 - 0.02 14.9 0.1 0.045 13.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 AID28183.1 - 0.021 14.4 0.0 0.06 12.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID28183.1 - 0.022 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ATPase_2 PF01637.18 AID28183.1 - 0.029 14.3 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 AID28183.1 - 0.041 14.0 0.0 0.091 12.8 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 AID28183.1 - 0.08 13.3 0.1 0.19 12.1 0.1 1.6 1 1 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 AID28183.1 - 0.1 11.7 0.1 0.17 11.0 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 AID28183.1 - 0.14 12.1 0.0 0.37 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 AID28183.1 - 0.16 12.0 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE FixS PF03597.15 AID28184.1 - 9.2e-21 73.3 0.6 1.1e-20 73.0 0.6 1.1 1 0 0 1 1 1 1 Cytochrome oxidase maturation protein cbb3-type E1-E2_ATPase PF00122.20 AID28185.1 - 1.5e-40 138.6 0.3 1.5e-40 138.6 0.3 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 AID28185.1 - 9.5e-31 107.7 0.0 1.7e-30 106.9 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 AID28185.1 - 9.8e-09 35.5 0.0 2.3e-08 34.3 0.0 1.6 1 0 0 1 1 1 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 AID28185.1 - 0.0051 16.6 0.0 0.04 13.6 0.0 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase TctB PF07331.11 AID28185.1 - 0.06 13.6 8.9 0.061 13.6 1.7 3.3 3 0 0 3 3 3 0 Tripartite tricarboxylate transporter TctB family FixH PF05751.11 AID28186.1 - 4.5e-41 140.3 0.5 5e-41 140.2 0.5 1.0 1 0 0 1 1 1 1 FixH Fer4_18 PF13746.6 AID28187.1 - 1.5e-42 144.3 5.8 3e-42 143.4 5.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain FixG_C PF11614.8 AID28187.1 - 7.9e-29 100.3 0.0 1.2e-28 99.8 0.0 1.3 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase Fer4_8 PF13183.6 AID28187.1 - 2.3e-07 31.2 6.2 0.00016 22.0 1.9 2.6 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_5 PF12801.7 AID28187.1 - 6e-07 29.3 2.4 6e-07 29.3 2.4 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_17 PF13534.6 AID28187.1 - 1.4e-06 28.8 9.4 0.00015 22.2 1.4 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID28187.1 - 1.8e-06 28.4 9.1 0.00025 21.6 3.3 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID28187.1 - 0.00017 21.7 16.1 0.00021 21.4 2.2 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID28187.1 - 0.011 15.8 13.3 0.011 15.8 13.3 2.8 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 AID28187.1 - 1 9.6 21.9 1.1 9.4 1.4 3.1 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4 PF00037.27 AID28187.1 - 1.6 8.7 25.6 0.057 13.3 7.2 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 AID28187.1 - 2.3 9.2 19.2 1.1 10.3 3.3 3.2 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 AID28187.1 - 4.2 8.1 23.9 0.059 13.9 3.8 3.4 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 AID28187.1 - 5.7 7.2 21.9 0.062 13.4 7.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Cytochrome_CBB3 PF13442.6 AID28188.1 - 7.9e-27 93.4 0.2 8.9e-14 51.6 0.0 2.4 2 0 0 2 2 2 2 Cytochrome C oxidase, cbb3-type, subunit III FixP_N PF14715.6 AID28188.1 - 4.3e-26 90.4 5.7 7.1e-26 89.7 5.7 1.4 1 0 0 1 1 1 1 N-terminal domain of cytochrome oxidase-cbb3, FixP Cytochrom_C PF00034.21 AID28188.1 - 1.8e-20 73.8 0.0 3.3e-09 37.8 0.0 3.1 2 1 0 2 2 2 2 Cytochrome c Cytochrom_C550 PF14495.6 AID28188.1 - 0.00099 18.8 0.0 1.5 8.5 0.0 2.4 2 0 0 2 2 2 2 Cytochrome c-550 domain DUF3365 PF11845.8 AID28188.1 - 0.009 16.3 0.0 6.2 7.1 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3365) PSCyt1 PF07635.11 AID28188.1 - 0.016 15.8 0.2 11 6.7 0.0 2.8 2 0 0 2 2 2 0 Planctomycete cytochrome C DHC PF09626.10 AID28188.1 - 0.029 15.2 0.0 1.4 9.8 0.0 2.3 2 0 0 2 2 2 0 Dihaem cytochrome c GSu_C4xC__C2xCH PF09698.10 AID28188.1 - 0.032 15.0 1.9 1.5 9.7 0.4 2.6 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) Cytochrome_C554 PF13435.6 AID28188.1 - 0.037 14.9 0.0 5.2 8.1 0.0 2.3 2 0 0 2 2 2 0 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.6 AID28188.1 - 0.043 13.8 0.0 11 6.1 0.0 2.2 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 AID28188.1 - 0.074 13.5 0.0 20 5.7 0.0 2.2 2 0 0 2 2 2 0 Cytochrome c3 Paired_CXXCH_1 PF09699.10 AID28188.1 - 0.12 12.2 0.7 9.8 6.0 0.1 2.3 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) FixQ PF05545.11 AID28189.1 - 6.7e-22 77.2 0.0 7.2e-22 77.1 0.0 1.0 1 0 0 1 1 1 1 Cbb3-type cytochrome oxidase component FixQ YrhK PF14145.6 AID28189.1 - 0.0002 21.1 0.1 0.00023 21.0 0.1 1.1 1 0 0 1 1 1 1 YrhK-like protein FixO PF02433.15 AID28190.1 - 1.1e-96 322.5 0.0 1.2e-96 322.3 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C oxidase, mono-heme subunit/FixO Cytochrom_C PF00034.21 AID28190.1 - 0.00049 21.2 0.1 0.015 16.5 0.1 2.3 1 1 0 1 1 1 1 Cytochrome c COX1 PF00115.20 AID28191.1 - 8.1e-122 407.2 63.3 8.1e-122 407.2 63.3 1.8 2 0 0 2 2 2 1 Cytochrome C and Quinol oxidase polypeptide I Hemerythrin PF01814.23 AID28192.1 - 1.8e-15 57.7 1.3 2.2e-15 57.5 1.3 1.1 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain HTH_Crp_2 PF13545.6 AID28193.1 - 5.2e-19 68.0 0.4 1e-18 67.1 0.4 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Crp PF00325.20 AID28193.1 - 5.8e-17 61.0 0.4 1.4e-16 59.8 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family cNMP_binding PF00027.29 AID28193.1 - 9.5e-07 28.8 0.0 3.9e-06 26.9 0.0 2.0 3 0 0 3 3 2 1 Cyclic nucleotide-binding domain MarR_2 PF12802.7 AID28193.1 - 5.4e-06 26.2 0.1 1.4e-05 24.9 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID28193.1 - 1.9e-05 24.2 0.0 3.5e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID28193.1 - 0.00048 20.0 0.0 0.0012 18.7 0.0 1.7 1 0 0 1 1 1 1 MarR family NIR_SIR_ferr PF03460.17 AID28193.1 - 0.00079 19.2 0.1 1.7 8.5 0.0 2.6 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain LexA_DNA_bind PF01726.16 AID28193.1 - 0.0023 17.7 0.0 0.0058 16.4 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain Fe_dep_repress PF01325.19 AID28193.1 - 0.0025 18.0 0.0 0.0053 16.9 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 AID28193.1 - 0.0054 16.8 0.1 0.016 15.3 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID28193.1 - 0.024 14.4 0.0 0.049 13.5 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_36 PF13730.6 AID28193.1 - 0.028 14.4 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 AID28193.1 - 0.032 14.1 0.0 0.082 12.8 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 AID28193.1 - 0.054 13.0 0.0 0.15 11.6 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.12 AID28193.1 - 0.087 12.8 0.5 0.18 11.8 0.1 1.7 2 0 0 2 2 2 0 HTH domain Radical_SAM PF04055.21 AID28194.1 - 1.3e-16 61.4 0.0 2.2e-16 60.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 AID28194.1 - 0.00013 21.9 0.1 0.00029 20.8 0.1 1.6 1 0 0 1 1 1 1 HemN C-terminal domain Ion_trans_2 PF07885.16 AID28195.1 - 4.1e-15 55.5 3.8 4.1e-15 55.5 3.8 2.4 1 1 2 3 3 3 1 Ion channel DUF2516 PF10724.9 AID28195.1 - 0.063 13.6 2.8 0.11 12.8 2.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) DUF3302 PF11742.8 AID28195.1 - 0.11 12.6 8.4 0.076 13.1 4.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3302) DUF1218 PF06749.12 AID28195.1 - 0.19 12.3 3.8 0.37 11.3 3.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1218) DUF779 PF05610.11 AID28197.1 - 1.8e-44 149.9 0.0 2.1e-44 149.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF779) Aldedh PF00171.22 AID28198.1 - 3.1e-167 556.8 0.0 3.5e-167 556.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family OmdA PF13376.6 AID28198.1 - 0.042 13.9 0.3 0.086 12.9 0.3 1.5 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated HTH_8 PF02954.19 AID28199.1 - 1.2e-13 50.6 1.7 1.2e-13 50.6 1.7 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family GAF PF01590.26 AID28199.1 - 1.3e-08 35.6 0.1 2.7e-08 34.5 0.1 1.6 1 0 0 1 1 1 1 GAF domain IclR PF01614.18 AID28199.1 - 4.6e-06 26.5 0.0 1e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_30 PF13556.6 AID28199.1 - 2.1e-05 24.3 0.6 6.7e-05 22.6 0.6 1.8 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_1 PF00126.27 AID28199.1 - 0.00098 19.0 0.5 0.0028 17.6 0.5 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_29 PF13551.6 AID28199.1 - 0.0014 18.6 0.9 0.0069 16.4 0.2 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_IclR PF09339.10 AID28199.1 - 0.006 16.4 0.6 0.016 15.0 0.6 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_50 PF18024.1 AID28199.1 - 0.011 15.4 0.0 0.028 14.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID28199.1 - 0.023 14.1 0.1 0.054 12.9 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.7 AID28199.1 - 0.046 13.6 2.5 0.058 13.3 0.5 2.2 3 0 0 3 3 3 0 MarR family HTH_23 PF13384.6 AID28199.1 - 0.047 13.5 0.1 0.13 12.1 0.1 1.8 1 0 0 1 1 1 0 Homeodomain-like domain RWP-RK PF02042.15 AID28199.1 - 0.048 13.6 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 RWP-RK domain HTH_28 PF13518.6 AID28199.1 - 0.052 13.7 0.2 0.15 12.3 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HrpB7 PF09486.10 AID28199.1 - 0.053 13.9 0.1 0.053 13.9 0.1 2.2 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) HTH_7 PF02796.15 AID28199.1 - 0.14 12.2 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF2089 PF09862.9 AID28199.1 - 0.15 12.1 0.0 0.34 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) MAPKK1_Int PF08923.10 AID28199.1 - 0.16 11.8 0.0 0.33 10.8 0.0 1.4 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting Aldo_ket_red PF00248.21 AID28200.1 - 1.4e-32 113.1 0.0 4.6e-30 104.8 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family RPEL PF02755.15 AID28200.1 - 0.26 11.1 0.2 0.26 11.1 0.2 2.2 3 0 0 3 3 3 0 RPEL repeat MTS PF05175.14 AID28201.1 - 3.9e-15 55.8 0.0 6.4e-13 48.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 AID28201.1 - 8.3e-13 48.4 0.0 1.1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID28201.1 - 1.3e-12 48.2 0.2 9.7e-12 45.4 0.1 2.1 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 AID28201.1 - 2.4e-08 33.7 0.1 4.2e-08 32.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 AID28201.1 - 6.3e-08 32.4 0.0 8.6e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 AID28201.1 - 1.3e-07 31.5 0.2 6e-07 29.3 0.1 2.1 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 AID28201.1 - 1.7e-07 31.8 0.1 5.4e-05 23.8 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 AID28201.1 - 8.1e-06 25.6 0.0 1.2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 AID28201.1 - 1.2e-05 25.3 0.0 1.6e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID28201.1 - 3.5e-05 24.5 0.1 0.0001 23.0 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 AID28201.1 - 3.7e-05 23.1 0.0 6.1e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_24 PF13578.6 AID28201.1 - 0.00013 22.9 0.1 0.00092 20.2 0.1 2.2 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID28201.1 - 0.00021 20.7 0.0 0.0012 18.3 0.0 1.9 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Met_10 PF02475.16 AID28201.1 - 0.00052 19.8 0.0 0.00069 19.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein AviRa PF11599.8 AID28201.1 - 0.00063 19.3 0.1 0.00099 18.6 0.1 1.3 1 0 0 1 1 1 1 RRNA methyltransferase AviRa N6_Mtase PF02384.16 AID28201.1 - 0.002 17.5 0.0 0.0027 17.0 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_32 PF13679.6 AID28201.1 - 0.0023 17.9 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 AID28201.1 - 0.0055 16.8 0.0 0.012 15.7 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_23 PF13489.6 AID28201.1 - 0.0063 16.4 0.0 0.027 14.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain TrmK PF04816.12 AID28201.1 - 0.0073 15.9 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_16 PF10294.9 AID28201.1 - 0.025 14.3 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_4 PF02390.17 AID28201.1 - 0.037 13.5 0.0 0.093 12.2 0.0 1.7 1 0 0 1 1 1 0 Putative methyltransferase DUF938 PF06080.12 AID28201.1 - 0.051 13.3 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) GCD14 PF08704.10 AID28201.1 - 0.069 12.8 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 AID28201.1 - 0.082 12.7 0.0 4.9 6.8 0.0 2.1 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Eco57I PF07669.11 AID28201.1 - 0.12 12.9 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Methyltransf_10 PF05971.12 AID28201.1 - 0.13 11.6 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase tRNA_U5-meth_tr PF05958.11 AID28201.1 - 0.14 11.1 0.0 0.21 10.5 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_20 PF12147.8 AID28201.1 - 0.18 10.9 0.0 0.38 9.8 0.0 1.5 2 0 0 2 2 2 0 Putative methyltransferase PP-binding PF00550.25 AID28202.1 - 2.3e-06 27.9 0.4 2.6e-06 27.7 0.4 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site AMP-binding PF00501.28 AID28203.1 - 1.6e-103 346.5 0.0 1.9e-103 346.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID28203.1 - 6.4e-21 75.1 0.4 1.7e-20 73.8 0.2 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Asn_synthase PF00733.21 AID28204.1 - 8.8e-92 308.5 0.5 1.1e-91 308.2 0.5 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 AID28204.1 - 3.9e-43 146.3 0.0 7.1e-43 145.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AID28204.1 - 1.3e-36 125.8 0.1 6.1e-36 123.6 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 AID28204.1 - 0.22 10.6 0.0 0.38 9.8 0.0 1.3 1 0 0 1 1 1 0 NAD synthase NAD_synthase PF02540.17 AID28205.1 - 2.5e-49 167.6 0.2 9.8e-27 93.6 0.1 2.0 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 AID28205.1 - 1.4e-05 24.1 0.1 0.00032 19.6 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.21 AID28205.1 - 0.0014 18.3 0.0 0.0023 17.6 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 AID28205.1 - 0.0042 16.6 0.0 0.097 12.2 0.0 2.3 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.19 AID28205.1 - 0.026 14.6 0.0 0.9 9.6 0.0 2.3 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family LBP_M PF17385.2 AID28205.1 - 0.096 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase central domain AMP-binding PF00501.28 AID28206.1 - 7.2e-67 225.8 0.0 9.4e-67 225.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Thioesterase PF00975.20 AID28206.1 - 4.2e-21 76.1 0.1 7.8e-21 75.2 0.1 1.4 1 0 0 1 1 1 1 Thioesterase domain AMP-binding_C PF13193.6 AID28206.1 - 2.2e-05 25.3 1.4 5.4e-05 24.1 0.3 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Hydrolase_4 PF12146.8 AID28206.1 - 0.002 17.4 0.0 0.0043 16.4 0.0 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 AID28206.1 - 0.0035 17.2 0.0 0.0068 16.3 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) PP-binding PF00550.25 AID28206.1 - 0.026 14.9 0.0 0.071 13.5 0.0 1.8 1 0 0 1 1 1 0 Phosphopantetheine attachment site Abhydrolase_1 PF00561.20 AID28206.1 - 0.026 14.2 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold PGAP1 PF07819.13 AID28206.1 - 0.19 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_6 PF12697.7 AID28206.1 - 7.5 7.1 17.4 0.022 15.3 4.3 3.0 2 1 0 3 3 3 0 Alpha/beta hydrolase family AAA_18 PF13238.6 AID28207.1 - 7e-07 29.9 0.6 0.0041 17.7 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 AID28207.1 - 3.2e-05 24.1 0.2 0.0003 21.0 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID28207.1 - 0.0001 22.7 0.1 0.00017 22.0 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 AID28207.1 - 0.00078 19.9 1.5 0.23 11.9 0.2 2.4 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 AID28207.1 - 0.003 17.2 0.0 0.0057 16.3 0.0 1.5 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 AID28207.1 - 0.0038 17.2 0.3 0.0098 15.8 0.0 1.8 2 1 0 2 2 2 1 NACHT domain TsaE PF02367.17 AID28207.1 - 0.0045 17.0 0.0 0.0068 16.4 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 AID28207.1 - 0.0066 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID28207.1 - 0.0075 16.5 0.1 0.06 13.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 AID28207.1 - 0.0077 16.0 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_25 PF13481.6 AID28207.1 - 0.0079 15.8 0.1 0.19 11.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 AID28207.1 - 0.015 15.2 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 AID28207.1 - 0.02 14.8 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 NTPase ABC_tran PF00005.27 AID28207.1 - 0.024 15.1 0.2 0.038 14.5 0.2 1.4 1 0 0 1 1 1 0 ABC transporter Ploopntkinase3 PF18751.1 AID28207.1 - 0.028 14.3 0.0 0.045 13.6 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_22 PF13401.6 AID28207.1 - 0.035 14.4 0.3 0.063 13.5 0.1 1.7 2 0 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 AID28207.1 - 0.037 13.7 0.2 4.4 7.0 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase RNA_helicase PF00910.22 AID28207.1 - 0.039 14.3 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_16 PF13191.6 AID28207.1 - 0.046 14.1 0.1 0.1 12.9 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 AID28207.1 - 0.049 13.4 0.0 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 AID28207.1 - 0.072 13.6 0.0 0.098 13.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID28207.1 - 0.1 12.7 0.0 0.24 11.5 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF815 PF05673.13 AID28207.1 - 0.13 11.4 0.0 6.5 5.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF815) CbiA PF01656.23 AID28207.1 - 0.17 12.0 0.1 0.44 10.6 0.1 1.7 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF768 PF05589.11 AID28208.1 - 1.8e-21 75.9 0.0 2e-21 75.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF768) HemolysinCabind PF00353.19 AID28209.1 - 5.3e-08 32.7 24.1 5.7e-06 26.2 7.3 3.6 3 0 0 3 3 3 2 RTX calcium-binding nonapeptide repeat (4 copies) Peptidase_M10_C PF08548.11 AID28209.1 - 0.0029 17.5 2.6 0.005 16.8 2.0 1.8 1 1 0 1 1 1 1 Peptidase M10 serralysin C terminal CBM_25 PF03423.13 AID28209.1 - 0.12 12.6 4.3 2.9 8.2 0.1 3.6 3 0 0 3 3 3 0 Carbohydrate binding domain (family 25) AMP-binding PF00501.28 AID28210.1 - 1e-67 228.6 0.0 1.3e-67 228.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Thioesterase PF00975.20 AID28210.1 - 2.1e-14 54.2 0.0 3.6e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain AMP-binding_C PF13193.6 AID28210.1 - 4.9e-08 33.8 0.6 3.1e-07 31.3 0.2 2.6 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Abhydrolase_1 PF00561.20 AID28210.1 - 0.00019 21.2 0.0 0.0006 19.5 0.0 1.7 2 0 0 2 2 2 1 alpha/beta hydrolase fold PP-binding PF00550.25 AID28210.1 - 0.00033 21.0 0.3 0.00091 19.5 0.0 1.9 2 0 0 2 2 2 1 Phosphopantetheine attachment site DLH PF01738.18 AID28210.1 - 0.011 15.4 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Glyco_trans_1_4 PF13692.6 AID28211.1 - 1.7e-29 103.0 0.0 3e-29 102.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 AID28211.1 - 6.8e-27 94.1 0.0 1e-26 93.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID28211.1 - 2.2e-07 31.0 0.0 4.6e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 AID28211.1 - 6e-06 26.3 0.0 1.3e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 AID28211.1 - 0.00039 20.8 0.0 0.00061 20.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Wzy_C PF04932.15 AID28212.1 - 4.6e-05 23.1 0.0 4.6e-05 23.1 0.0 3.0 2 2 1 3 3 3 1 O-Antigen ligase Asn_synthase PF00733.21 AID28213.1 - 2.9e-115 385.7 0.2 3.7e-115 385.4 0.2 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 AID28213.1 - 1.9e-46 157.0 0.0 3.5e-46 156.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AID28213.1 - 1.2e-43 148.6 0.0 2.1e-43 147.8 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 AID28213.1 - 0.0043 16.5 0.0 0.0084 15.6 0.0 1.4 1 0 0 1 1 1 1 Aluminium induced protein QueC PF06508.13 AID28213.1 - 0.0092 15.5 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 AID28213.1 - 0.0095 15.1 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Wzz PF02706.15 AID28214.1 - 1.3e-06 28.6 0.0 4.6e-06 26.8 0.0 2.0 1 0 0 1 1 1 1 Chain length determinant protein AAA_31 PF13614.6 AID28214.1 - 0.0022 17.9 0.0 0.011 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 AID28214.1 - 0.0055 16.8 0.0 0.25 11.4 0.0 2.6 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain GNVR PF13807.6 AID28214.1 - 0.024 14.5 0.1 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 G-rich domain on putative tyrosine kinase Polysacc_synt_C PF14667.6 AID28215.1 - 7.1e-08 32.6 9.6 7.1e-08 32.6 9.6 4.4 4 2 1 5 5 2 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 AID28215.1 - 1.2e-07 31.3 6.9 3.5e-06 26.5 6.9 2.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 AID28215.1 - 4.4e-07 29.6 13.5 4.4e-07 29.6 13.5 3.0 1 1 1 2 2 1 1 Polysaccharide biosynthesis protein AAA_33 PF13671.6 AID28215.1 - 1.9e-06 28.1 0.0 1.5e-05 25.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID28215.1 - 0.00029 21.3 0.0 0.00088 19.7 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 AID28215.1 - 0.00078 20.0 0.0 0.0017 18.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID28215.1 - 0.0019 18.5 0.0 0.14 12.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain MatE PF01554.18 AID28215.1 - 0.0066 16.1 11.6 0.0066 16.1 11.6 3.9 2 1 0 2 2 2 1 MatE RNA_helicase PF00910.22 AID28215.1 - 0.018 15.4 0.0 0.036 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase KTI12 PF08433.10 AID28215.1 - 0.019 14.4 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NACHT PF05729.12 AID28215.1 - 0.02 14.8 0.0 0.043 13.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 AID28215.1 - 0.023 14.9 0.0 0.047 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 AID28215.1 - 0.037 13.8 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 AID28215.1 - 0.038 13.9 0.0 0.071 13.0 0.0 1.4 1 0 0 1 1 1 0 NTPase Thymidylate_kin PF02223.17 AID28215.1 - 0.042 13.5 0.0 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 Thymidylate kinase AAA_16 PF13191.6 AID28215.1 - 0.051 14.0 0.0 0.14 12.5 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain APS_kinase PF01583.20 AID28215.1 - 0.062 13.2 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase SRP54 PF00448.22 AID28215.1 - 0.067 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 AID28215.1 - 0.081 12.6 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein RuvB_N PF05496.12 AID28215.1 - 0.085 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_17 PF13207.6 AID28215.1 - 0.17 12.3 0.1 0.3 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain Epimerase PF01370.21 AID28216.1 - 4.7e-52 176.9 0.0 5.7e-52 176.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28216.1 - 3e-49 168.2 0.0 5.3e-49 167.4 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID28216.1 - 3.7e-15 55.8 0.0 4.9e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID28216.1 - 3.6e-13 49.2 0.0 4.6e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 AID28216.1 - 1.9e-10 40.4 0.0 1.1e-09 37.8 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 AID28216.1 - 0.00019 21.4 0.0 0.00033 20.6 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 AID28216.1 - 0.00028 20.2 3.3 0.019 14.1 0.1 2.4 2 1 0 2 2 2 2 Male sterility protein adh_short PF00106.25 AID28216.1 - 0.00042 19.8 0.1 0.0021 17.5 0.0 1.9 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 AID28216.1 - 0.023 14.6 0.0 0.047 13.6 0.0 1.6 1 1 0 1 1 1 0 KR domain GerE PF00196.19 AID28217.1 - 2e-05 24.0 0.0 3.6e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family PAS PF00989.25 AID28217.1 - 0.00023 21.1 0.0 0.00065 19.7 0.0 1.8 2 1 0 2 2 2 1 PAS fold PAS_8 PF13188.7 AID28217.1 - 0.0016 18.4 0.0 0.06 13.4 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS_4 PF08448.10 AID28217.1 - 0.02 15.1 0.1 0.078 13.2 0.0 2.0 2 1 0 2 2 2 0 PAS fold HTH_23 PF13384.6 AID28217.1 - 0.091 12.6 0.2 0.19 11.6 0.2 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HWE_HK PF07536.14 AID28218.1 - 2.9e-18 66.4 0.8 1.2e-17 64.3 0.0 2.2 2 0 0 2 2 2 1 HWE histidine kinase PAS_3 PF08447.12 AID28218.1 - 1.8e-17 63.4 0.0 1.4e-08 34.9 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 AID28218.1 - 4.6e-09 36.5 0.0 3.1e-07 30.6 0.0 2.3 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 AID28218.1 - 1.8e-08 34.3 0.0 9.7e-08 32.0 0.0 2.0 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.10 AID28218.1 - 0.001 19.3 0.4 0.23 11.7 0.1 2.5 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.7 AID28218.1 - 0.027 14.5 0.0 0.11 12.5 0.1 2.1 2 0 0 2 2 2 0 PAS domain HATPase_c_2 PF13581.6 AID28218.1 - 0.061 13.3 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain GerE PF00196.19 AID28219.1 - 4.6e-18 64.5 0.2 1e-17 63.4 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Response_reg PF00072.24 AID28219.1 - 1.1e-13 51.3 0.0 2.1e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 AID28219.1 - 4e-07 29.6 0.2 9.1e-07 28.5 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID28219.1 - 0.0016 17.9 0.2 0.0035 16.8 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 AID28219.1 - 0.003 17.3 0.0 0.011 15.5 0.0 1.9 1 1 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 AID28219.1 - 0.013 15.5 0.0 0.036 14.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 AID28219.1 - 0.013 15.2 0.1 0.043 13.6 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.11 AID28219.1 - 0.044 13.7 0.0 0.083 12.8 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor HTH_28 PF13518.6 AID28219.1 - 0.2 11.8 0.6 1.2 9.3 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain MinC_C PF03775.16 AID28220.1 - 0.11 12.5 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Septum formation inhibitor MinC, C-terminal domain NTP_transferase PF00483.23 AID28221.1 - 6.4e-24 84.9 0.0 7.3e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 AID28221.1 - 0.1 12.9 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain DegT_DnrJ_EryC1 PF01041.17 AID28222.1 - 4.8e-105 351.8 0.0 5.4e-105 351.7 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 AID28222.1 - 3.1e-08 33.2 0.0 5.1e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AID28222.1 - 0.00014 20.6 0.0 0.00021 20.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID28222.1 - 0.00063 18.8 0.0 0.00094 18.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Bac_transf PF02397.16 AID28223.1 - 9.4e-45 152.5 0.0 1.1e-44 152.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial sugar transferase DUF3040 PF11239.8 AID28223.1 - 0.19 12.0 4.2 0.17 12.1 1.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3040) GDP_Man_Dehyd PF16363.5 AID28224.1 - 1.4e-66 225.2 0.0 1.8e-66 224.8 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 AID28224.1 - 2.9e-52 177.5 0.0 3.5e-52 177.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID28224.1 - 3.3e-24 85.4 0.0 4.4e-24 85.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 AID28224.1 - 3.2e-17 62.6 0.3 3e-16 59.4 0.3 2.2 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 AID28224.1 - 3.9e-16 59.0 0.0 4.5e-16 58.9 0.0 1.3 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 AID28224.1 - 2e-11 43.5 0.0 2.2e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 AID28224.1 - 4.9e-11 42.9 0.0 8.8e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 AID28224.1 - 2.8e-10 40.0 0.1 1e-08 34.9 0.1 2.6 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 AID28224.1 - 0.00052 19.7 0.1 0.0016 18.0 0.1 1.8 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 AID28224.1 - 0.017 15.0 0.1 0.043 13.7 0.1 1.8 1 1 0 1 1 1 0 KR domain YAcAr PF10686.9 AID28224.1 - 0.098 12.6 0.1 0.99 9.4 0.0 2.6 3 0 0 3 3 3 0 YspA, cpYpsA-related SLOG family adh_short_C2 PF13561.6 AID28224.1 - 0.12 12.0 0.1 0.55 9.8 0.1 2.0 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Ldh_1_N PF00056.23 AID28224.1 - 0.13 12.3 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PD40 PF07676.12 AID28225.1 - 0.15 12.1 5.5 0.28 11.2 0.3 3.2 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat SLBB PF10531.9 AID28227.1 - 0.018 14.9 0.0 0.045 13.6 0.0 1.7 1 0 0 1 1 1 0 SLBB domain Methyltransf_23 PF13489.6 AID28228.1 - 9e-13 48.4 0.0 1.2e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID28228.1 - 2.7e-12 47.2 0.1 4.3e-12 46.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID28228.1 - 5.2e-12 46.3 0.1 8.7e-12 45.5 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID28228.1 - 2.3e-11 43.7 0.0 3.1e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID28228.1 - 4.7e-11 43.3 0.0 9.1e-11 42.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID28228.1 - 3e-06 26.8 0.0 5.2e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 AID28228.1 - 0.00027 20.5 0.0 0.00051 19.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 AID28228.1 - 0.0022 18.1 0.1 0.25 11.5 0.1 2.1 1 1 0 1 1 1 1 FtsJ-like methyltransferase DREV PF05219.12 AID28228.1 - 0.025 13.7 0.0 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase N6_N4_Mtase PF01555.18 AID28228.1 - 0.061 13.0 0.0 2.6 7.7 0.0 2.2 2 0 0 2 2 2 0 DNA methylase CheR PF01739.18 AID28228.1 - 0.091 12.2 0.0 0.59 9.6 0.0 2.0 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain ABC_tran PF00005.27 AID28229.1 - 8.3e-29 100.8 0.0 1.4e-28 100.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID28229.1 - 1.7e-12 47.6 0.4 3.3e-12 46.6 0.4 1.4 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_21 PF13304.6 AID28229.1 - 3.2e-05 23.9 0.0 0.009 15.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28229.1 - 6.9e-05 22.4 0.0 0.15 11.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28229.1 - 7.2e-05 22.5 0.0 0.00041 20.0 0.0 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID28229.1 - 0.0012 18.6 0.0 0.0029 17.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28229.1 - 0.0078 16.6 1.4 0.014 15.7 0.4 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 AID28229.1 - 0.0097 16.1 0.0 0.022 14.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 AID28229.1 - 0.014 15.3 0.1 0.031 14.2 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 AID28229.1 - 0.018 15.6 0.1 0.027 15.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID28229.1 - 0.023 14.1 0.0 0.061 12.7 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 AID28229.1 - 0.034 14.1 0.1 0.088 12.7 0.0 1.6 2 0 0 2 2 1 0 RsgA GTPase AAA_22 PF13401.6 AID28229.1 - 0.042 14.1 0.9 0.1 12.9 0.9 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID28229.1 - 0.078 13.4 0.0 0.19 12.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 AID28229.1 - 0.082 13.0 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase MobB PF03205.14 AID28229.1 - 0.085 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DLIC PF05783.11 AID28229.1 - 0.094 11.5 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_18 PF13238.6 AID28229.1 - 0.094 13.3 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID28229.1 - 0.099 12.9 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID28229.1 - 0.12 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.18 AID28229.1 - 0.13 11.6 0.1 0.24 10.7 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 AID28229.1 - 0.14 11.9 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 AID28229.1 - 0.23 11.2 0.1 0.37 10.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain HlyD_3 PF13437.6 AID28230.1 - 1.8e-18 67.2 1.8 9.6e-17 61.6 0.1 3.0 3 0 0 3 3 3 1 HlyD family secretion protein HlyD_D23 PF16576.5 AID28230.1 - 1.4e-11 44.0 3.0 2.2e-09 36.8 0.8 2.5 2 1 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 AID28230.1 - 1.5e-09 37.6 4.7 3.2e-08 33.4 3.7 3.1 2 1 0 2 2 2 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 AID28230.1 - 3.1e-05 23.7 5.7 0.00016 21.4 0.4 3.7 3 0 0 3 3 3 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID28230.1 - 0.018 14.8 1.8 0.7 9.8 0.1 2.5 2 0 0 2 2 2 0 Biotin-requiring enzyme Nup54 PF13874.6 AID28230.1 - 1.3 9.2 10.4 9.3 6.4 4.0 2.5 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 Fib_alpha PF08702.10 AID28231.1 - 0.0081 16.3 9.7 0.59 10.3 2.5 3.6 3 0 0 3 3 3 2 Fibrinogen alpha/beta chain family Fez1 PF06818.15 AID28231.1 - 0.2 12.1 35.5 0.069 13.6 9.5 3.3 1 1 1 3 3 3 0 Fez1 DUF148 PF02520.17 AID28231.1 - 0.68 10.1 10.7 6.2 7.0 0.0 4.3 2 2 1 4 4 4 0 Domain of unknown function DUF148 CEP63 PF17045.5 AID28231.1 - 1.1 9.1 29.9 0.017 15.0 13.1 2.9 1 1 1 3 3 3 0 Centrosomal protein of 63 kDa TolA_bind_tri PF16331.5 AID28231.1 - 1.5 9.0 23.3 4.7 7.4 1.7 5.1 2 1 3 5 5 5 0 TolA binding protein trimerisation TACC_C PF05010.14 AID28231.1 - 1.8 8.3 23.1 1.9 8.3 0.2 3.6 3 1 1 4 4 4 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal MAD PF05557.13 AID28231.1 - 1.8 6.8 35.9 2.1 6.6 4.4 3.2 1 1 2 3 3 3 0 Mitotic checkpoint protein HIP1_clath_bdg PF16515.5 AID28231.1 - 2.9 8.6 33.8 0.041 14.5 5.5 4.2 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4200 PF13863.6 AID28231.1 - 7.1 7.1 29.5 9.4 6.7 1.9 5.4 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) FlaC_arch PF05377.11 AID28231.1 - 8.4 6.9 11.6 26 5.3 0.1 5.0 6 0 0 6 6 6 0 Flagella accessory protein C (FlaC) SIS PF01380.22 AID28232.1 - 4e-53 178.8 0.1 2.5e-26 92.0 0.0 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 AID28232.1 - 9.7e-23 80.8 0.0 2.2e-22 79.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 AID28232.1 - 8.5e-18 64.4 0.0 1.7e-17 63.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 AID28232.1 - 0.0027 17.7 0.1 0.014 15.5 0.0 2.2 3 0 0 3 3 3 1 SIS domain GATase_4 PF13230.6 AID28232.1 - 0.0071 15.3 0.0 0.011 14.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II OCD_Mu_crystall PF02423.15 AID28233.1 - 4.8e-123 410.2 0.1 5.5e-123 410.0 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family IlvN PF07991.12 AID28233.1 - 0.053 13.1 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Arginase PF00491.21 AID28234.1 - 4.4e-69 233.1 0.1 5.1e-69 232.9 0.1 1.0 1 0 0 1 1 1 1 Arginase family AsnC_trans_reg PF01037.21 AID28235.1 - 9.9e-13 47.9 0.1 1.9e-12 46.9 0.0 1.5 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID28235.1 - 6.6e-12 45.1 6.1 6.6e-12 45.1 6.1 2.7 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID28235.1 - 1.8e-08 33.8 0.7 3.3e-08 33.0 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID28235.1 - 2.6e-06 27.3 0.1 4.8e-06 26.4 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 AID28235.1 - 3.9e-05 23.3 0.2 0.00011 21.9 0.2 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_30 PF13556.6 AID28235.1 - 0.00035 20.3 1.6 0.00088 19.0 0.1 2.3 2 1 1 3 3 3 1 PucR C-terminal helix-turn-helix domain HTH_20 PF12840.7 AID28235.1 - 0.00065 19.7 0.4 0.0017 18.3 0.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28235.1 - 0.00098 19.0 2.0 0.0017 18.2 0.7 2.1 2 0 0 2 2 2 1 MarR family Sigma70_r4 PF04545.16 AID28235.1 - 0.0031 17.0 0.2 0.007 15.9 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_28 PF13518.6 AID28235.1 - 0.0064 16.6 1.9 0.0068 16.5 0.2 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_DeoR PF08220.12 AID28235.1 - 0.0075 16.0 0.2 0.017 14.9 0.2 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain GntR PF00392.21 AID28235.1 - 0.011 15.4 0.3 0.019 14.6 0.3 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family PaaX PF07848.12 AID28235.1 - 0.025 14.8 0.2 0.055 13.7 0.2 1.6 1 0 0 1 1 1 0 PaaX-like protein HTH_5 PF01022.20 AID28235.1 - 0.039 13.8 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Tnp_ISL3 PF13542.6 AID28235.1 - 0.04 13.3 0.6 0.073 12.5 0.6 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 DUF977 PF06163.11 AID28235.1 - 0.042 13.8 0.3 0.053 13.5 0.3 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) TrmB PF01978.19 AID28235.1 - 0.042 13.7 0.0 0.082 12.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 AID28235.1 - 0.055 13.5 0.3 0.13 12.3 0.3 1.7 1 0 0 1 1 1 0 Winged helix-turn helix HMA PF00403.26 AID28235.1 - 0.057 13.9 0.0 9 6.8 0.0 2.3 2 0 0 2 2 2 0 Heavy-metal-associated domain Fe_dep_repress PF01325.19 AID28235.1 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 AID28235.1 - 0.12 12.2 0.1 0.27 11.1 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain FCD PF07729.12 AID28236.1 - 1.8e-28 99.5 8.7 3e-28 98.8 7.5 1.8 1 1 1 2 2 2 1 FCD domain GntR PF00392.21 AID28236.1 - 8.7e-19 66.9 0.3 2.6e-18 65.4 0.3 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID28236.1 - 0.00071 19.1 0.0 0.0033 17.0 0.1 2.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID28236.1 - 0.001 19.0 0.0 0.022 14.8 0.0 3.0 3 0 0 3 3 3 1 Winged helix-turn helix HTH_11 PF08279.12 AID28236.1 - 0.0017 18.3 0.0 0.0042 17.0 0.0 1.7 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 AID28236.1 - 0.0018 18.4 0.0 0.0049 17.0 0.0 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 AID28236.1 - 0.0025 17.6 0.0 0.0077 16.1 0.0 1.8 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_AsnC-type PF13404.6 AID28236.1 - 0.0094 15.8 0.5 0.038 13.8 0.3 2.1 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 AID28236.1 - 0.015 15.2 0.1 0.06 13.2 0.2 2.2 2 1 0 2 2 2 0 MarR family PaaX PF07848.12 AID28236.1 - 0.021 15.1 0.0 0.043 14.0 0.0 1.5 1 0 0 1 1 1 0 PaaX-like protein HTH_Crp_2 PF13545.6 AID28236.1 - 0.074 13.0 0.1 0.44 10.5 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain LysR_substrate PF03466.20 AID28237.1 - 1.6e-29 102.8 5.2 2.6e-29 102.1 5.2 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28237.1 - 2.3e-19 69.1 0.5 2.3e-19 69.1 0.5 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 AID28237.1 - 0.018 14.6 0.0 0.043 13.4 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 AID28237.1 - 0.022 14.6 0.0 0.052 13.4 0.0 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_5 PF01022.20 AID28237.1 - 0.028 14.3 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family SBF_like PF13593.6 AID28238.1 - 5e-97 325.0 24.0 5.6e-97 324.8 24.0 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 AID28238.1 - 2.6e-09 37.0 10.0 2.6e-09 37.0 10.0 2.0 2 1 0 2 2 2 1 Sodium Bile acid symporter family GMC_oxred_N PF00732.19 AID28239.1 - 3.1e-65 220.5 0.0 5.6e-65 219.6 0.0 1.4 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID28239.1 - 2e-34 119.2 0.0 3.7e-34 118.3 0.0 1.5 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 AID28239.1 - 2.6e-07 30.5 6.0 4.1e-06 26.6 4.9 2.7 2 1 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 AID28239.1 - 7.9e-06 25.2 0.2 1.3e-05 24.4 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 AID28239.1 - 5.1e-05 22.5 1.5 0.021 13.9 0.4 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 AID28239.1 - 7.6e-05 22.2 0.2 0.15 11.3 0.5 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID28239.1 - 8.4e-05 21.9 0.0 0.036 13.3 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28239.1 - 0.00013 22.2 0.8 0.00053 20.2 0.2 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID28239.1 - 0.0006 18.6 0.4 0.0035 16.1 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 AID28239.1 - 0.005 16.1 0.0 0.0084 15.4 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 AID28239.1 - 0.0052 17.3 0.1 0.96 10.1 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID28239.1 - 0.013 14.6 0.0 1.6 7.7 0.0 2.2 2 0 0 2 2 2 0 Glucose inhibited division protein A Trp_halogenase PF04820.14 AID28239.1 - 0.015 14.2 0.1 0.023 13.6 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase FAD_binding_3 PF01494.19 AID28239.1 - 0.015 14.6 0.1 0.023 13.9 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain ApbA PF02558.16 AID28239.1 - 0.027 14.1 0.1 0.055 13.1 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 AID28239.1 - 0.053 13.5 2.4 1.4 8.9 0.3 3.1 2 1 0 2 2 2 0 FAD-NAD(P)-binding TrkA_N PF02254.18 AID28239.1 - 0.085 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain FCD PF07729.12 AID28240.1 - 4.3e-26 91.8 2.4 7.2e-26 91.1 2.4 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28240.1 - 5.9e-15 54.7 0.1 1.2e-14 53.7 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 AID28240.1 - 0.001 19.1 0.1 0.0036 17.3 0.1 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28240.1 - 0.0011 18.8 0.0 0.003 17.4 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 AID28240.1 - 0.0045 16.8 0.1 0.01 15.6 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 AID28240.1 - 0.0075 16.1 0.0 0.021 14.6 0.0 1.8 1 0 0 1 1 1 1 HTH DNA binding domain TFIIE_alpha PF02002.17 AID28240.1 - 0.015 15.2 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_29 PF13551.6 AID28240.1 - 0.015 15.3 0.0 0.27 11.3 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn helix HTH_24 PF13412.6 AID28240.1 - 0.029 13.9 0.4 0.085 12.4 0.2 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID28240.1 - 0.03 14.1 0.1 0.079 12.8 0.1 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID28240.1 - 0.058 13.4 0.0 0.18 11.8 0.0 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_23 PF13384.6 AID28240.1 - 0.1 12.4 0.4 13 5.8 0.0 2.9 2 1 1 3 3 3 0 Homeodomain-like domain HTH_CodY PF08222.11 AID28240.1 - 0.12 12.0 0.1 0.25 10.9 0.1 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_8 PF02954.19 AID28240.1 - 0.15 11.9 0.9 0.91 9.4 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family HTH_28 PF13518.6 AID28240.1 - 0.15 12.2 1.9 1.8 8.7 0.0 3.2 4 0 0 4 4 4 0 Helix-turn-helix domain GST_C PF00043.25 AID28240.1 - 0.16 12.2 0.1 2.8 8.2 0.0 2.2 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain Abhydrolase_6 PF12697.7 AID28242.1 - 1.5e-23 84.5 0.9 2e-23 84.2 0.9 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID28242.1 - 8.4e-22 78.0 0.0 4.4e-19 69.1 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID28242.1 - 1.8e-13 50.3 0.0 1.4e-12 47.4 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 AID28242.1 - 0.0019 18.4 0.0 0.0021 18.2 0.0 1.4 1 1 0 1 1 1 1 Thioesterase domain Esterase PF00756.20 AID28242.1 - 0.0031 17.2 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Ndr PF03096.14 AID28242.1 - 0.017 13.9 0.0 0.064 12.0 0.0 1.7 2 0 0 2 2 2 0 Ndr family PAF-AH_p_II PF03403.13 AID28242.1 - 0.11 11.0 0.0 2.7 6.4 0.0 2.1 1 1 1 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II FAD_binding_3 PF01494.19 AID28243.1 - 5.8e-23 81.7 0.1 1.6e-22 80.2 0.1 1.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID28243.1 - 4.6e-08 32.6 0.3 0.0033 16.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID28243.1 - 6.1e-05 22.8 0.6 0.2 11.2 0.4 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID28243.1 - 6.5e-05 22.2 0.2 0.00027 20.1 0.1 1.8 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 AID28243.1 - 0.00036 19.4 0.0 0.083 11.6 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.6 AID28243.1 - 0.00054 20.1 0.3 0.0012 19.0 0.3 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID28243.1 - 0.0015 19.0 0.0 0.073 13.6 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID28243.1 - 0.0061 15.7 0.4 0.0088 15.2 0.4 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Amino_oxidase PF01593.24 AID28243.1 - 0.0066 15.8 0.0 0.3 10.3 0.0 2.3 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 AID28243.1 - 0.059 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID28243.1 - 0.06 12.2 2.4 3.3 6.5 0.2 2.4 3 0 0 3 3 3 0 Tryptophan halogenase AA_synth PF06684.11 AID28244.1 - 3.2e-60 202.6 0.0 3.6e-60 202.5 0.0 1.0 1 0 0 1 1 1 1 Amino acid synthesis PBP PF01161.20 AID28245.1 - 2.3e-31 108.9 0.0 2.7e-31 108.6 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Aldolase_II PF00596.21 AID28246.1 - 4e-35 121.4 0.0 5e-35 121.1 0.0 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain RAMA PF18755.1 AID28246.1 - 0.16 12.4 0.1 0.27 11.7 0.1 1.3 1 0 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated GMC_oxred_N PF00732.19 AID28247.1 - 4.8e-80 269.1 0.0 6.2e-80 268.7 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID28247.1 - 1.1e-43 149.2 0.1 1.8e-43 148.5 0.1 1.3 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID28247.1 - 0.0022 17.2 0.1 0.0036 16.4 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 AID28247.1 - 0.016 14.6 0.1 0.032 13.6 0.1 1.5 1 1 0 1 1 1 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID28248.1 - 3.4e-55 186.7 0.0 4.4e-55 186.3 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 AID28248.1 - 2e-22 79.6 0.0 3.5e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 AID28248.1 - 1.1e-09 38.7 0.1 2.3e-09 37.6 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 AID28248.1 - 6.5e-05 23.0 0.0 0.00012 22.0 0.0 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 AID28248.1 - 0.00017 21.2 0.1 0.00028 20.5 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 AID28248.1 - 0.0031 18.1 0.2 0.0063 17.1 0.2 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 AID28248.1 - 0.0038 16.6 0.1 0.0066 15.8 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 AID28248.1 - 0.016 14.8 0.4 0.025 14.2 0.4 1.4 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 AID28248.1 - 0.023 15.0 0.0 0.052 13.8 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 AID28248.1 - 0.06 12.6 0.2 0.097 11.9 0.2 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ABC_tran PF00005.27 AID28249.1 - 1.5e-31 109.8 0.0 2e-31 109.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28249.1 - 8.2e-07 29.1 0.8 0.0036 17.2 0.2 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 AID28249.1 - 0.0002 20.3 0.0 0.016 14.1 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_16 PF13191.6 AID28249.1 - 0.00023 21.6 0.1 0.0011 19.4 0.1 1.9 1 1 1 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 AID28249.1 - 0.00027 20.5 0.6 0.0034 17.0 0.6 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28249.1 - 0.00042 20.1 0.0 0.0077 16.0 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA PF00004.29 AID28249.1 - 0.00043 20.7 0.1 0.0064 16.9 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID28249.1 - 0.0005 20.0 0.2 0.00093 19.1 0.2 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_28 PF13521.6 AID28249.1 - 0.00083 19.6 0.0 0.0074 16.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID28249.1 - 0.0018 18.6 0.8 0.015 15.5 0.7 2.4 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID28249.1 - 0.0019 18.1 0.1 0.0033 17.4 0.1 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 AID28249.1 - 0.0022 17.7 0.2 0.0043 16.8 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID28249.1 - 0.0036 16.8 0.1 0.035 13.5 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 AID28249.1 - 0.013 15.7 0.1 0.07 13.3 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID28249.1 - 0.017 15.1 0.1 0.043 13.8 0.1 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.6 AID28249.1 - 0.06 13.0 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 AID28249.1 - 0.092 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.23 AID28249.1 - 0.099 12.7 0.2 0.18 11.9 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.12 AID28249.1 - 0.12 12.3 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 AID28249.1 - 0.12 12.7 0.1 0.22 11.9 0.1 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 AID28249.1 - 0.12 12.9 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID28249.1 - 0.17 12.3 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 AID28250.1 - 4.3e-25 88.5 19.8 4.3e-25 88.5 19.8 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1 PF09084.11 AID28251.1 - 9.2e-56 189.2 0.0 1.2e-55 188.8 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 AID28251.1 - 4.6e-12 46.2 0.1 9.2e-12 45.2 0.1 1.5 1 1 0 1 1 1 1 NMT1-like family SBP_bac_3 PF00497.20 AID28251.1 - 0.025 14.0 0.0 4.4 6.7 0.0 2.7 2 1 1 3 3 3 0 Bacterial extracellular solute-binding proteins, family 3 Bmp PF02608.14 AID28253.1 - 8.3e-30 103.8 0.6 1e-29 103.5 0.6 1.0 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Peripla_BP_6 PF13458.6 AID28253.1 - 0.00047 19.9 0.5 0.00047 19.9 0.5 2.2 1 1 0 2 2 2 1 Periplasmic binding protein ABC_tran PF00005.27 AID28254.1 - 2.6e-47 160.8 0.0 3.9e-32 111.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 AID28254.1 - 0.0004 20.3 0.2 0.028 14.3 0.0 3.0 4 0 0 4 4 4 1 RsgA GTPase AAA_21 PF13304.6 AID28254.1 - 0.00079 19.3 0.7 0.0043 16.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 AID28254.1 - 0.00093 19.0 0.0 0.0028 17.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28254.1 - 0.0011 18.7 0.0 0.0025 17.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 AID28254.1 - 0.017 14.7 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 AID28254.1 - 0.073 11.9 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 AID28254.1 - 0.084 13.1 0.7 10 6.4 0.0 2.6 3 0 0 3 3 3 0 AAA domain AAA_23 PF13476.6 AID28254.1 - 0.12 12.8 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID28255.1 - 3e-34 118.4 35.9 3e-34 118.4 35.9 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF975 PF06161.11 AID28255.1 - 0.1 12.4 12.1 0.1 12.3 2.7 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF975) TMEMspv1-c74-12 PF11044.8 AID28255.1 - 1.9 8.6 3.3 2.3 8.3 0.9 2.3 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein BPD_transp_2 PF02653.16 AID28256.1 - 4.4e-41 140.8 39.1 5.6e-41 140.5 39.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Lactamase_B PF00753.27 AID28257.1 - 1.3e-29 103.7 0.2 1.6e-29 103.3 0.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID28257.1 - 8.6e-06 25.4 0.0 3.6e-05 23.4 0.0 2.0 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Aminotran_5 PF00266.19 AID28258.1 - 2.3e-25 89.3 0.0 3.1e-25 88.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V adh_short_C2 PF13561.6 AID28259.1 - 2e-59 201.0 9.4 2.3e-59 200.8 9.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28259.1 - 9.2e-54 181.9 5.0 1.1e-53 181.6 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28259.1 - 2.6e-10 40.5 2.3 3.5e-10 40.1 2.3 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28259.1 - 0.00014 21.5 0.2 0.00018 21.0 0.2 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 AID28259.1 - 0.0042 16.4 0.4 0.0094 15.3 0.4 1.8 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 3HCDH_N PF02737.18 AID28259.1 - 0.024 14.5 0.3 0.045 13.6 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 AID28259.1 - 0.059 13.4 0.7 0.11 12.6 0.7 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID28259.1 - 0.081 12.3 0.2 0.12 11.7 0.2 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 AID28259.1 - 0.11 12.5 4.3 0.3 11.0 2.1 2.3 2 1 0 2 2 2 0 Zinc-binding dehydrogenase DHDPS PF00701.22 AID28261.1 - 7.6e-32 110.2 0.0 9.5e-32 109.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Amidohydro_2 PF04909.14 AID28261.1 - 0.014 15.2 0.1 0.031 14.1 0.1 1.6 1 0 0 1 1 1 0 Amidohydrolase TA_inhibitor PF17574.2 AID28261.1 - 0.046 13.8 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) DUF4508 PF14969.6 AID28261.1 - 0.22 11.8 0.0 0.46 10.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) Pro_racemase PF05544.11 AID28262.1 - 3e-141 470.2 1.2 3.4e-141 470.0 1.2 1.0 1 0 0 1 1 1 1 Proline racemase Beta-lactamase PF00144.24 AID28264.1 - 1.7e-74 251.0 6.3 2.1e-74 250.8 6.3 1.0 1 0 0 1 1 1 1 Beta-lactamase rve PF00665.26 AID28265.1 - 7.7e-15 55.1 0.2 2.7e-13 50.2 0.2 2.6 1 1 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID28265.1 - 8.4e-14 51.1 0.2 1.7e-13 50.2 0.2 1.5 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 AID28265.1 - 0.00025 21.2 0.1 0.00048 20.2 0.1 1.5 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 AID28265.1 - 0.023 14.9 0.2 0.03 14.6 0.2 1.4 1 1 0 1 1 1 0 DDE domain Sugar_tr PF00083.24 AID28266.1 - 8.1e-17 61.2 21.7 4.8e-15 55.4 7.5 2.2 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 AID28266.1 - 9.4e-17 61.0 79.5 2.7e-16 59.5 48.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MRAP PF15183.6 AID28266.1 - 5.1 7.1 5.2 2.3 8.2 0.0 2.6 3 0 0 3 3 3 0 Melanocortin-2 receptor accessory protein family COX_ARM PF06481.14 AID28267.1 - 1.4e-18 66.5 0.0 3.5e-18 65.2 0.0 1.7 1 0 0 1 1 1 1 COX Aromatic Rich Motif COX2 PF00116.20 AID28267.1 - 1.2e-07 31.6 0.1 5.4e-07 29.5 0.0 1.9 1 1 1 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 AID28267.1 - 0.09 12.9 1.0 0.16 12.1 1.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain DUF5385 PF17359.2 AID28267.1 - 0.094 12.3 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Wzy_C PF04932.15 AID28267.1 - 0.14 11.7 0.5 0.22 11.1 0.5 1.3 1 0 0 1 1 1 0 O-Antigen ligase COX1 PF00115.20 AID28268.1 - 1.3e-136 455.9 70.5 1.3e-136 455.9 70.5 2.3 3 0 0 3 3 3 1 Cytochrome C and Quinol oxidase polypeptide I COX3 PF00510.18 AID28269.1 - 2.9e-16 60.1 15.3 6.9e-16 58.9 15.3 1.5 1 1 0 1 1 1 1 Cytochrome c oxidase subunit III COX4_pro PF03626.14 AID28270.1 - 7.6e-19 67.9 17.1 1e-18 67.5 17.1 1.2 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV Herpes_LMP1 PF05297.11 AID28270.1 - 0.0038 16.5 3.0 0.0044 16.3 3.0 1.2 1 0 0 1 1 1 1 Herpesvirus latent membrane protein 1 (LMP1) MtrF PF09472.10 AID28270.1 - 0.017 14.5 0.3 0.017 14.5 0.3 2.3 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) PhoLip_ATPase_C PF16212.5 AID28270.1 - 0.059 13.1 7.4 0.07 12.9 7.4 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal ECF_trnsprt PF12822.7 AID28270.1 - 0.21 11.7 12.8 0.27 11.3 12.8 1.1 1 0 0 1 1 1 0 ECF transporter, substrate-specific component TssN PF17555.2 AID28270.1 - 0.4 10.0 6.3 0.46 9.8 6.3 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN ABC2_membrane_3 PF12698.7 AID28270.1 - 0.88 8.6 14.8 1.5 7.9 14.8 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein SID-1_RNA_chan PF13965.6 AID28270.1 - 1.9 6.8 7.1 2.2 6.6 7.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 HXXEE PF13787.6 AID28270.1 - 1.9 9.3 14.2 1.3 9.9 11.5 1.8 1 1 1 2 2 2 0 Protein of unknown function with HXXEE motif DUF5518 PF17647.1 AID28270.1 - 4.7 7.4 18.8 0.1 12.7 7.7 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5518) DUF1218 PF06749.12 AID28270.1 - 6.7 7.3 11.9 2.4 8.8 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) RDD PF06271.12 AID28270.1 - 9 6.5 14.3 0.87 9.8 6.1 2.0 1 1 1 2 2 2 0 RDD family SURF1 PF02104.15 AID28271.1 - 1.2e-35 123.4 0.1 1.4e-35 123.2 0.1 1.0 1 0 0 1 1 1 1 SURF1 family Gram_pos_anchor PF00746.21 AID28271.1 - 7 6.7 8.8 4.2 7.4 0.6 2.4 2 0 0 2 2 2 0 LPXTG cell wall anchor motif HATPase_c PF02518.26 AID28272.1 - 2.6e-14 53.7 0.0 4.5e-14 52.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID28272.1 - 7.4e-06 25.9 0.0 1.2e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HisKA PF00512.25 AID28272.1 - 0.00019 21.4 0.1 0.00072 19.5 0.0 2.1 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 AID28272.1 - 0.014 15.3 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 GHKL domain Response_reg PF00072.24 AID28273.1 - 1.8e-17 63.5 0.0 2.8e-17 62.9 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HTH_8 PF02954.19 AID28273.1 - 1.5e-11 43.9 0.6 2.5e-11 43.2 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_30 PF13556.6 AID28273.1 - 2.7e-06 27.1 0.4 5.4e-06 26.1 0.4 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 AID28273.1 - 0.0066 16.2 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 AID28273.1 - 0.014 15.5 0.0 0.026 14.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.6 AID28273.1 - 0.015 15.0 0.4 0.033 13.9 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 AID28273.1 - 0.016 15.5 0.0 0.032 14.6 0.0 1.4 1 0 0 1 1 1 0 Transposase HTH_7 PF02796.15 AID28273.1 - 0.026 14.6 0.1 0.048 13.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 AID28273.1 - 0.029 14.4 0.0 0.074 13.1 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Phage_NinH PF06322.11 AID28273.1 - 0.032 14.1 0.1 0.058 13.3 0.1 1.4 1 0 0 1 1 1 0 Phage NinH protein Isochorismatase PF00857.20 AID28274.1 - 3e-23 82.9 0.1 3.6e-23 82.6 0.1 1.0 1 0 0 1 1 1 1 Isochorismatase family DUF763 PF05559.11 AID28275.1 - 7e-91 304.6 0.0 8.1e-91 304.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF763) DUF763 PF05559.11 AID28276.1 - 2.6e-26 92.6 0.0 3.7e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF763) HHH PF00633.23 AID28276.1 - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF296 PF03479.15 AID28277.1 - 2.9e-16 59.8 0.0 3.4e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain Hydrolase_3 PF08282.12 AID28279.1 - 2.2e-30 106.3 0.0 2.3e-15 57.0 0.0 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 AID28279.1 - 2.4e-11 43.7 0.0 1.5e-07 31.2 0.0 2.3 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase DUF87 PF01935.17 AID28279.1 - 4e-09 36.9 0.0 1e-08 35.6 0.0 1.6 2 0 0 2 2 1 1 Helicase HerA, central domain Hydrolase PF00702.26 AID28279.1 - 1e-06 29.2 0.2 0.00081 19.7 0.0 2.9 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase AAA_16 PF13191.6 AID28279.1 - 3.2e-06 27.7 0.0 1e-05 26.0 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID28279.1 - 0.00015 22.0 1.1 0.0041 17.4 0.2 3.0 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 AID28279.1 - 0.0016 18.2 0.0 0.0042 16.8 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 AID28279.1 - 0.0019 18.8 0.4 0.056 14.0 0.0 2.6 3 0 0 3 3 2 1 AAA domain AAA_29 PF13555.6 AID28279.1 - 0.0048 16.6 0.4 0.012 15.4 0.4 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 AID28279.1 - 0.0067 16.9 0.1 0.02 15.4 0.0 1.7 2 0 0 2 2 1 1 ABC transporter AAA PF00004.29 AID28279.1 - 0.0069 16.8 0.0 0.059 13.8 0.0 2.4 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AID28279.1 - 0.0076 16.2 0.0 0.21 11.5 0.0 2.4 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 AID28279.1 - 0.0098 15.8 0.0 0.024 14.5 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase Hydrolase_6 PF13344.6 AID28279.1 - 0.011 15.8 0.0 0.05 13.7 0.0 2.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase AAA_24 PF13479.6 AID28279.1 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID28279.1 - 0.018 15.0 0.0 0.043 13.7 0.0 1.6 2 0 0 2 2 1 0 Adenylylsulphate kinase MeaB PF03308.16 AID28279.1 - 0.028 13.4 0.1 0.094 11.7 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_10 PF12846.7 AID28279.1 - 0.028 13.3 0.0 1.3 7.8 0.0 2.2 2 0 0 2 2 2 0 AAA-like domain TrwB_AAD_bind PF10412.9 AID28279.1 - 0.029 13.3 0.0 0.063 12.2 0.0 1.5 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.23 AID28279.1 - 0.034 14.2 0.0 0.059 13.4 0.0 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Hpr_kinase_C PF07475.12 AID28279.1 - 0.05 13.1 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain TniB PF05621.11 AID28279.1 - 0.062 12.7 0.0 3.3 7.1 0.0 2.6 3 0 0 3 3 3 0 Bacterial TniB protein AAA_30 PF13604.6 AID28279.1 - 0.065 13.0 0.0 0.17 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain HAD_2 PF13419.6 AID28279.1 - 0.074 13.1 0.0 2.1 8.4 0.0 2.7 2 1 0 3 3 3 0 Haloacid dehalogenase-like hydrolase AAA_28 PF13521.6 AID28279.1 - 0.087 13.1 0.0 0.21 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 AID28279.1 - 0.098 11.8 0.0 0.27 10.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_5 PF07728.14 AID28279.1 - 0.13 12.2 0.0 0.29 11.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 AID28279.1 - 0.14 12.6 0.0 0.39 11.1 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 AID28279.1 - 0.14 11.8 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain DEAD PF00270.29 AID28279.1 - 0.15 11.8 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase MMR_HSR1 PF01926.23 AID28279.1 - 0.18 11.9 0.1 0.39 10.8 0.1 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2608 PF11019.8 AID28279.1 - 0.23 10.9 0.0 0.4 10.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) adh_short_C2 PF13561.6 AID28280.1 - 4.8e-63 212.8 0.0 6.4e-63 212.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28280.1 - 1.8e-50 171.1 0.1 2.5e-50 170.7 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28280.1 - 9.2e-14 51.8 0.7 1.3e-13 51.2 0.7 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28280.1 - 0.0018 17.8 0.1 0.0025 17.3 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 AID28280.1 - 0.052 12.9 0.1 17 4.7 0.0 3.1 3 1 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 AID28280.1 - 0.1 12.8 0.2 0.19 12.0 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain KTSC PF13619.6 AID28281.1 - 1.7e-21 75.8 0.1 2e-21 75.5 0.1 1.0 1 0 0 1 1 1 1 KTSC domain 2OG-FeII_Oxy_2 PF13532.6 AID28282.1 - 1.5e-20 74.2 0.0 2.4e-20 73.6 0.0 1.4 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily adh_short_C2 PF13561.6 AID28283.1 - 5.1e-60 202.9 6.5 6.3e-60 202.6 6.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28283.1 - 4.3e-46 156.8 5.8 5.3e-46 156.5 5.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28283.1 - 5e-08 33.1 4.3 8.4e-08 32.3 4.3 1.3 1 0 0 1 1 1 1 KR domain VacA2 PF03077.14 AID28283.1 - 0.013 15.3 0.4 0.013 15.3 0.4 2.0 2 0 0 2 2 2 0 Putative vacuolating cytotoxin UxuA PF03786.13 AID28284.1 - 4.1e-157 522.5 0.0 4.6e-157 522.3 0.0 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.24 AID28284.1 - 2.3e-12 46.8 0.0 5.7e-12 45.5 0.0 1.6 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Sigma70_r2 PF04542.14 AID28285.1 - 8.3e-17 60.7 0.3 2.2e-16 59.4 0.3 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID28285.1 - 1.3e-09 37.6 0.5 2e-09 37.0 0.0 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 SnoaL_2 PF12680.7 AID28285.1 - 0.0015 19.1 2.0 0.0027 18.3 0.3 2.3 2 1 0 2 2 2 1 SnoaL-like domain DUF4440 PF14534.6 AID28285.1 - 0.016 15.6 0.1 0.046 14.1 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) DUF410 PF04190.13 AID28285.1 - 0.22 11.3 0.0 1.5 8.6 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF410) CMD PF02627.20 AID28286.1 - 1.6e-19 69.8 0.3 1.6e-19 69.8 0.3 2.1 2 1 0 2 2 2 1 Carboxymuconolactone decarboxylase family FAD_binding_4 PF01565.23 AID28287.1 - 2.9e-31 108.1 1.1 5.4e-31 107.2 1.1 1.5 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 AID28287.1 - 3.1e-15 56.0 0.3 7.1e-15 54.8 0.3 1.7 1 0 0 1 1 1 1 Berberine and berberine like Coat_F PF07875.12 AID28287.1 - 0.2 11.9 0.0 0.36 11.1 0.0 1.4 1 0 0 1 1 1 0 Coat F domain GerE PF00196.19 AID28289.1 - 3.8e-14 52.0 0.0 5.1e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 AID28289.1 - 0.00021 21.0 0.5 0.00039 20.1 0.5 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_10 PF04967.12 AID28289.1 - 0.00044 20.0 0.2 0.00086 19.1 0.0 1.5 2 0 0 2 2 2 1 HTH DNA binding domain Sigma70_r4 PF04545.16 AID28289.1 - 0.00095 18.6 0.4 0.0017 17.9 0.4 1.5 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 AID28289.1 - 0.0023 17.6 0.1 0.0045 16.6 0.1 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 AID28289.1 - 0.019 14.5 0.1 0.051 13.2 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF2089 PF09862.9 AID28289.1 - 0.028 14.4 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) HTH_11 PF08279.12 AID28289.1 - 0.048 13.6 0.1 0.079 12.9 0.1 1.4 1 0 0 1 1 1 0 HTH domain HTH_AsnC-type PF13404.6 AID28289.1 - 0.049 13.5 0.2 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Fe_bilin_red PF05996.12 AID28289.1 - 0.1 12.3 0.0 0.16 11.6 0.0 1.3 1 1 0 1 1 1 0 Ferredoxin-dependent bilin reductase Trypsin PF00089.26 AID28290.1 - 7.6e-12 45.5 0.0 3.2e-11 43.5 0.0 1.8 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 AID28290.1 - 3.1e-07 31.4 0.0 5.7e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Trypsin-like peptidase domain DUF4438 PF14505.6 AID28293.1 - 3e-109 364.0 0.1 3.5e-109 363.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4438) KOW PF00467.29 AID28293.1 - 0.036 14.0 5.0 0.036 14.0 5.0 2.2 2 0 0 2 2 2 0 KOW motif NPV_P10 PF05531.12 AID28296.1 - 0.066 13.7 0.0 0.21 12.1 0.0 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DIOX_N PF14226.6 AID28299.1 - 2.8e-35 121.6 0.0 4.2e-35 121.1 0.0 1.3 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 AID28299.1 - 2.2e-20 73.0 0.0 3.7e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily UBA_5 PF16577.5 AID28299.1 - 0.061 13.5 0.1 4.6 7.5 0.0 2.4 2 0 0 2 2 2 0 UBA domain DUF5372 PF17342.2 AID28300.1 - 0.14 12.6 0.1 0.15 12.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5372) adh_short PF00106.25 AID28301.1 - 5e-29 101.1 0.3 6.4e-29 100.8 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID28301.1 - 1.6e-25 90.1 0.8 2.1e-25 89.7 0.8 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID28301.1 - 2.5e-06 27.5 4.1 0.00017 21.5 0.1 2.3 1 1 1 2 2 2 2 KR domain NAD_binding_10 PF13460.6 AID28301.1 - 3.2e-06 27.2 1.1 7e-06 26.1 0.3 1.8 1 1 1 2 2 2 1 NAD(P)H-binding F420_oxidored PF03807.17 AID28301.1 - 0.011 16.4 0.2 0.011 16.4 0.2 2.0 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 AID28301.1 - 0.018 14.6 0.3 0.027 14.1 0.3 1.3 1 0 0 1 1 1 0 NmrA-like family LytR_C PF13399.6 AID28301.1 - 0.021 15.8 0.7 0.3 12.1 0.5 2.6 2 1 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator UPF0146 PF03686.13 AID28301.1 - 0.041 13.8 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) TrkA_N PF02254.18 AID28301.1 - 0.1 12.9 0.6 0.27 11.5 0.1 1.9 2 0 0 2 2 2 0 TrkA-N domain NAD_Gly3P_dh_N PF01210.23 AID28301.1 - 0.15 12.0 0.0 0.37 10.8 0.0 1.6 1 1 1 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF768 PF05589.11 AID28302.1 - 2e-07 30.9 0.0 2.9e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF768) ANAPC_CDC26 PF10471.9 AID28302.1 - 3.4 8.6 6.1 0.92 10.4 2.1 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex APC subunit CDC26 Peptidase_S58 PF03576.14 AID28303.1 - 2.8e-100 335.7 0.6 3.2e-100 335.5 0.6 1.0 1 0 0 1 1 1 1 Peptidase family S58 S-layer PF07752.11 AID28303.1 - 0.22 10.5 0.0 0.38 9.8 0.0 1.2 1 0 0 1 1 1 0 S-layer protein Exonuc_VII_L PF02601.15 AID28304.1 - 9.4e-93 311.1 0.2 3.1e-92 309.4 0.2 1.7 1 1 0 1 1 1 1 Exonuclease VII, large subunit tRNA_anti_2 PF13742.6 AID28304.1 - 1e-26 92.9 0.0 5e-26 90.7 0.0 2.1 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 AID28304.1 - 8.5e-09 35.3 0.0 1.9e-08 34.2 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain UPF0126 PF03458.13 AID28304.1 - 0.075 12.9 0.0 0.24 11.3 0.0 1.8 1 0 0 1 1 1 0 UPF0126 domain RecJ_OB PF17768.1 AID28304.1 - 0.12 12.6 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 RecJ OB domain TruB_C PF09142.11 AID28304.1 - 2 8.3 11.9 1 9.2 0.4 4.3 4 1 1 5 5 5 0 tRNA Pseudouridine synthase II, C terminal EAL PF00563.20 AID28305.1 - 6.4e-62 209.2 0.0 1.1e-61 208.4 0.0 1.4 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID28305.1 - 3.2e-48 163.5 0.2 6e-48 162.6 0.2 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain CHASE4 PF05228.13 AID28305.1 - 5.9e-22 78.4 0.0 1.1e-21 77.5 0.0 1.5 1 0 0 1 1 1 1 CHASE4 domain LysR_substrate PF03466.20 AID28306.1 - 1.2e-30 106.5 0.9 1.6e-30 106.1 0.9 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28306.1 - 5.9e-23 80.6 0.2 1.6e-22 79.2 0.2 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF1127 PF06568.11 AID28308.1 - 2e-09 37.0 0.1 3.5e-09 36.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) DUF937 PF06078.11 AID28309.1 - 1.6e-26 93.5 13.8 1.6e-26 93.5 13.8 2.7 2 1 0 2 2 2 1 Bacterial protein of unknown function (DUF937) GCS2 PF04107.13 AID28310.1 - 1.8e-80 270.4 0.0 2.2e-80 270.1 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) Methyltrans_RNA PF04452.14 AID28311.1 - 8.2e-61 205.2 0.0 9.6e-61 205.0 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase KleE PF17394.2 AID28312.1 - 0.06 13.6 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein GATase PF00117.28 AID28313.1 - 7.2e-11 42.2 0.0 1.1e-10 41.6 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 AID28313.1 - 0.00017 21.2 0.0 0.00033 20.3 0.0 1.4 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 AID28313.1 - 0.0006 19.6 0.0 0.001 18.9 0.0 1.4 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.13 AID28313.1 - 0.018 14.8 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 Peptidase C26 Lectin_legB PF00139.19 AID28313.1 - 0.02 14.4 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Legume lectin domain DUF5325 PF17259.2 AID28314.1 - 0.03 14.2 0.3 0.036 13.9 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Metallophos PF00149.28 AID28315.1 - 1.9e-15 57.9 0.2 3e-15 57.3 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID28315.1 - 0.014 15.6 0.0 0.039 14.1 0.0 1.7 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 AID28315.1 - 0.077 11.3 0.6 0.14 10.4 0.6 1.3 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase FMN_dh PF01070.18 AID28316.1 - 1.6e-134 448.3 0.3 1.8e-134 448.2 0.3 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 AID28316.1 - 6.4e-08 32.3 2.0 6e-07 29.2 1.4 2.1 2 0 0 2 2 2 1 Nitronate monooxygenase Glu_synthase PF01645.17 AID28316.1 - 3.9e-06 26.2 0.6 1.1e-05 24.8 0.6 1.8 1 1 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 AID28316.1 - 2.4e-05 23.5 0.3 5e-05 22.5 0.3 1.5 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 AID28316.1 - 0.0058 16.1 0.1 0.012 15.1 0.1 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 AID28316.1 - 0.059 12.6 0.5 0.11 11.6 0.5 1.5 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase FCD PF07729.12 AID28317.1 - 2.6e-26 92.5 10.7 2.6e-26 92.5 10.7 2.2 3 0 0 3 3 3 1 FCD domain GntR PF00392.21 AID28317.1 - 1.7e-20 72.4 0.4 3.8e-20 71.3 0.4 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 AID28317.1 - 0.0064 16.2 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Raco_middle PF17651.1 AID28317.1 - 0.017 14.8 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 RACo middle region MarR_2 PF12802.7 AID28317.1 - 0.026 14.4 0.3 0.088 12.7 0.1 2.1 2 0 0 2 2 2 0 MarR family HTH_28 PF13518.6 AID28317.1 - 0.027 14.6 0.4 0.15 12.2 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 AID28317.1 - 0.033 14.5 0.0 0.086 13.2 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 AID28317.1 - 0.041 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 AID28317.1 - 0.078 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3422 PF11902.8 AID28318.1 - 8.6e-154 512.7 0.4 9.7e-154 512.5 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3422) TOBE PF03459.17 AID28318.1 - 0.048 14.0 0.8 2.7 8.4 0.1 2.5 2 0 0 2 2 2 0 TOBE domain Phage_holin_3_6 PF07332.11 AID28318.1 - 0.27 11.3 3.4 0.13 12.3 0.3 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III FAD-oxidase_C PF02913.19 AID28319.1 - 7e-68 228.9 0.0 1.1e-67 228.3 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 AID28319.1 - 2.1e-39 134.5 0.6 6e-39 133.0 0.3 1.9 2 0 0 2 2 2 1 FAD binding domain FAD_binding_4 PF01565.23 AID28321.1 - 5e-18 65.2 1.0 2.5e-17 62.9 0.3 2.5 2 1 0 2 2 2 1 FAD binding domain FAD-oxidase_C PF02913.19 AID28321.1 - 9.3e-05 22.2 0.1 0.0002 21.1 0.1 1.5 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain CCG PF02754.16 AID28322.1 - 5.7e-27 93.7 2.6 1.5e-12 47.6 0.1 3.1 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_7 PF12838.7 AID28322.1 - 2.9e-12 47.0 5.4 5.4e-12 46.1 5.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID28322.1 - 6.4e-11 42.5 3.1 1.5e-10 41.4 3.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 AID28322.1 - 7.4e-10 39.2 4.1 1.6e-09 38.2 4.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID28322.1 - 3.6e-07 30.2 8.4 2.8e-06 27.4 9.1 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 AID28322.1 - 1.4e-06 28.1 10.9 0.0054 16.8 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 AID28322.1 - 4.8e-06 26.2 10.0 0.0086 15.9 2.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AID28322.1 - 7.2e-06 25.8 12.4 0.0064 16.5 2.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 AID28322.1 - 9.7e-06 26.4 4.1 1.9e-05 25.5 4.1 1.5 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 AID28322.1 - 2.9e-05 24.2 12.0 0.0046 17.3 3.0 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 AID28322.1 - 9.1e-05 22.5 9.6 0.0036 17.4 11.0 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 AID28322.1 - 0.00051 20.1 6.9 0.3 11.2 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 AID28322.1 - 0.037 14.2 7.4 0.82 9.9 0.8 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 AID28322.1 - 0.062 14.1 9.1 2.5 9.0 2.5 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 AID28322.1 - 0.15 12.8 1.9 13 6.6 0.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 AID28322.1 - 0.48 11.0 8.8 3.5 8.3 0.7 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 AID28322.1 - 8.8 7.5 18.6 17 6.6 4.8 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain THF_DHG_CYH_C PF02882.19 AID28323.1 - 4.7e-61 204.8 1.6 6.8e-61 204.3 1.6 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 AID28323.1 - 1e-28 99.9 0.0 1.7e-28 99.2 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain adh_short PF00106.25 AID28323.1 - 0.072 12.5 0.1 0.14 11.6 0.1 1.4 1 0 0 1 1 1 0 short chain dehydrogenase YkuD PF03734.14 AID28324.1 - 7.4e-21 75.1 0.2 1.2e-20 74.4 0.2 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Adenine_glyco PF03352.13 AID28325.1 - 2.9e-73 245.4 0.0 3.4e-73 245.2 0.0 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase HTH_21 PF13276.6 AID28325.1 - 0.016 15.3 0.0 0.072 13.2 0.0 2.1 2 0 0 2 2 2 0 HTH-like domain tRNA-synt_His PF13393.6 AID28327.1 - 2.2e-38 132.3 0.0 3.8e-38 131.5 0.0 1.4 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 AID28327.1 - 1.5e-09 37.9 0.2 3.7e-09 36.6 0.2 1.7 1 1 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 AID28327.1 - 1.9e-07 31.2 0.0 9.3e-07 29.0 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 AID28327.1 - 0.00036 20.1 0.0 0.0011 18.5 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) PDZ_6 PF17820.1 AID28327.1 - 0.12 12.2 0.2 0.32 10.9 0.2 1.7 1 0 0 1 1 1 0 PDZ domain tRNA-synt_His PF13393.6 AID28328.1 - 5.3e-37 127.8 0.5 2.8e-18 66.3 0.0 2.0 1 1 1 2 2 2 2 Histidyl-tRNA synthetase HisG PF01634.18 AID28329.1 - 1e-42 145.8 0.1 1.3e-42 145.5 0.1 1.1 1 0 0 1 1 1 1 ATP phosphoribosyltransferase AMP-binding PF00501.28 AID28330.1 - 6.6e-108 361.0 0.2 7.7e-108 360.8 0.2 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID28330.1 - 7.9e-20 71.6 0.0 3.5e-19 69.6 0.0 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Na_Ca_ex PF01699.24 AID28331.1 - 9.6e-19 67.8 38.8 9.8e-15 54.8 11.8 3.0 2 1 1 3 3 3 3 Sodium/calcium exchanger protein UreF PF01730.16 AID28331.1 - 0.53 10.9 5.0 11 6.6 4.8 2.4 1 1 0 1 1 1 0 UreF LysR_substrate PF03466.20 AID28332.1 - 7.3e-36 123.5 1.3 7.3e-36 123.5 1.3 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID28332.1 - 9e-21 73.6 2.9 1.7e-20 72.7 2.9 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID28332.1 - 0.0035 17.4 0.1 0.0093 16.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28332.1 - 0.017 15.0 0.9 0.034 14.0 0.3 1.8 2 0 0 2 2 2 0 MarR family Cro PF09048.10 AID28332.1 - 0.072 13.1 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Cro Methyltransf_11 PF08241.12 AID28333.1 - 4.5e-22 78.5 0.0 8.2e-22 77.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID28333.1 - 1.1e-19 70.9 0.0 3e-19 69.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID28333.1 - 9.4e-16 58.0 0.0 1.8e-15 57.1 0.0 1.4 1 1 1 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID28333.1 - 4.6e-13 49.0 0.0 7.6e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 AID28333.1 - 5.6e-12 46.3 0.0 1.1e-11 45.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID28333.1 - 2.1e-07 30.5 0.0 3.4e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 AID28333.1 - 6.7e-07 29.3 0.0 9.6e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 AID28333.1 - 0.0022 18.0 0.0 0.0034 17.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AID28333.1 - 0.0049 16.7 0.0 0.0074 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 AID28333.1 - 0.0083 15.7 0.0 0.015 14.9 0.0 1.5 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 AID28333.1 - 0.012 14.9 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_8 PF05148.15 AID28333.1 - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase UPF0020 PF01170.18 AID28333.1 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DOT1 PF08123.13 AID28333.1 - 0.23 11.0 0.0 0.31 10.5 0.0 1.1 1 0 0 1 1 1 0 Histone methylation protein DOT1 Myelin_PLP PF01275.19 AID28334.1 - 4 7.2 7.1 0.13 12.1 0.7 1.7 2 0 0 2 2 2 0 Myelin proteolipid protein (PLP or lipophilin) TetR_N PF00440.23 AID28335.1 - 3.7e-08 33.0 0.2 6.5e-08 32.2 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family IU_nuc_hydro PF01156.19 AID28336.1 - 2.4e-88 296.6 0.1 2.7e-88 296.5 0.1 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase DIOX_N PF14226.6 AID28337.1 - 3.3e-28 98.8 0.0 5.5e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 AID28337.1 - 3.1e-23 82.2 0.0 6.2e-23 81.2 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily SBP_bac_3 PF00497.20 AID28338.1 - 3.8e-41 141.0 0.1 5e-41 140.6 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 BPD_transp_1 PF00528.22 AID28339.1 - 1.1e-17 64.4 19.1 1.1e-17 64.4 19.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component CPP1-like PF11833.8 AID28339.1 - 0.045 13.4 3.9 0.089 12.4 3.9 1.6 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like UPF0182 PF03699.13 AID28339.1 - 4.5 5.3 7.5 7.3 4.6 7.5 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0182) ABC_tran PF00005.27 AID28340.1 - 3e-33 115.2 0.0 3.9e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28340.1 - 5.2e-14 52.8 0.0 1.1e-06 28.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28340.1 - 3.7e-08 33.1 0.3 0.0005 19.6 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28340.1 - 0.00032 20.4 0.0 0.00057 19.6 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28340.1 - 0.00032 21.3 0.0 0.00055 20.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID28340.1 - 0.0011 18.7 0.0 0.03 14.0 0.0 2.0 1 1 0 2 2 2 1 AAA ATPase domain ABC_ATPase PF09818.9 AID28340.1 - 0.0026 16.6 0.0 1.2 7.8 0.0 2.4 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_22 PF13401.6 AID28340.1 - 0.0032 17.7 0.1 0.017 15.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID28340.1 - 0.0048 17.1 0.0 0.009 16.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28340.1 - 0.006 17.0 0.2 0.0099 16.3 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID28340.1 - 0.014 15.1 0.4 0.17 11.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 AID28340.1 - 0.016 15.0 0.0 0.034 13.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 AID28340.1 - 0.027 13.1 0.0 0.47 9.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID28340.1 - 0.03 13.9 0.1 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID28340.1 - 0.033 14.1 0.1 0.065 13.1 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 AID28340.1 - 0.035 14.5 0.0 5.4 7.4 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 AID28340.1 - 0.039 14.2 0.1 0.72 10.1 0.1 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 AID28340.1 - 0.085 13.4 0.1 0.17 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID28340.1 - 0.093 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 AID28340.1 - 0.13 12.3 0.0 1.2 9.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_27 PF13514.6 AID28340.1 - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain LysR_substrate PF03466.20 AID28341.1 - 2.1e-43 148.1 3.6 2.7e-43 147.8 3.6 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28341.1 - 5e-20 71.2 0.1 1.1e-19 70.1 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family peroxidase PF00141.23 AID28342.1 - 1.4e-90 303.0 0.0 3.1e-49 167.7 0.0 2.2 2 0 0 2 2 2 2 Peroxidase MIP PF00230.20 AID28343.1 - 1.2e-48 165.9 19.9 1.3e-48 165.7 19.9 1.0 1 0 0 1 1 1 1 Major intrinsic protein Jagunal PF07086.12 AID28343.1 - 0.084 12.9 0.3 0.13 12.3 0.3 1.3 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis PRA1 PF03208.19 AID28343.1 - 0.83 9.3 7.7 0.073 12.7 2.4 1.9 2 1 0 2 2 2 0 PRA1 family protein Methyltr_RsmB-F PF01189.17 AID28344.1 - 4.7e-36 124.3 0.0 6.4e-36 123.9 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 AID28344.1 - 0.00038 19.9 0.0 0.0015 17.9 0.0 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 AID28344.1 - 0.0013 18.5 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID28344.1 - 0.0037 17.9 0.0 0.014 16.1 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain FtsJ PF01728.19 AID28344.1 - 0.024 14.8 0.0 0.039 14.1 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase MTS PF05175.14 AID28344.1 - 0.19 11.3 0.1 0.58 9.7 0.1 1.7 1 1 1 2 2 2 0 Methyltransferase small domain Methyltransf_4 PF02390.17 AID28344.1 - 0.23 10.9 0.0 0.48 9.9 0.0 1.7 1 1 0 1 1 1 0 Putative methyltransferase TspO_MBR PF03073.15 AID28345.1 - 4.2e-41 140.1 21.9 5.3e-41 139.8 21.9 1.0 1 0 0 1 1 1 1 TspO/MBR family 4HBT PF03061.22 AID28346.1 - 1.1e-13 51.3 0.1 2.3e-13 50.3 0.1 1.5 2 0 0 2 2 2 1 Thioesterase superfamily DUF4442 PF14539.6 AID28346.1 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 AID28346.1 - 0.057 13.7 0.1 0.075 13.3 0.1 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily PNP_UDP_1 PF01048.20 AID28347.1 - 2e-08 33.8 0.1 3.4e-06 26.5 0.1 2.1 1 1 0 2 2 2 2 Phosphorylase superfamily GMP_synt_C PF00958.22 AID28348.1 - 4e-42 142.2 0.0 7.1e-42 141.4 0.0 1.4 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 AID28348.1 - 5.4e-30 104.6 0.0 7.8e-30 104.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I NAD_synthase PF02540.17 AID28348.1 - 3.9e-09 36.0 0.0 6e-05 22.3 0.0 2.2 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 AID28348.1 - 5.3e-06 25.5 0.2 2.9e-05 23.0 0.1 1.9 2 0 0 2 2 2 1 tRNA methyl transferase Peptidase_C26 PF07722.13 AID28348.1 - 3e-05 23.9 0.0 0.00013 21.8 0.0 2.0 2 0 0 2 2 2 1 Peptidase C26 ATP_bind_3 PF01171.20 AID28348.1 - 0.00044 20.1 0.0 0.0007 19.4 0.0 1.3 1 0 0 1 1 1 1 PP-loop family QueC PF06508.13 AID28348.1 - 0.00066 19.2 0.0 0.13 11.7 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC ThiI PF02568.14 AID28348.1 - 0.00091 18.9 0.0 0.0033 17.1 0.0 1.8 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 AID28348.1 - 0.0086 15.8 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 1 Asparagine synthase PAPS_reduct PF01507.19 AID28348.1 - 0.062 13.3 0.0 0.19 11.7 0.0 1.8 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Arginosuc_synth PF00764.19 AID28348.1 - 0.071 12.4 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Arginosuccinate synthase DUF1566 PF07603.11 AID28349.1 - 2.3e-08 34.4 0.1 2.9e-08 34.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1566) TcdB_toxin_midN PF12256.8 AID28351.1 - 3.2e-22 78.8 3.2 8.2e-18 64.4 0.1 5.7 5 0 0 5 5 5 2 Insecticide toxin TcdB middle/N-terminal region VCBS PF13517.6 AID28351.1 - 4e-14 52.9 20.8 1.1e-05 25.9 0.6 6.9 6 1 1 7 7 7 4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RHS_repeat PF05593.14 AID28351.1 - 1.1e-12 48.2 25.0 0.016 15.7 2.0 9.2 7 1 0 7 7 7 5 RHS Repeat Peptidase_M91 PF14891.6 AID28351.1 - 1.4e-09 38.5 0.0 2.8e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Effector protein SpvB PF03534.13 AID28351.1 - 8.3e-07 28.5 0.1 1.7e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 Salmonella virulence plasmid 65kDa B protein FG-GAP PF01839.23 AID28351.1 - 3.6e-05 23.8 4.7 1.1 9.5 0.1 4.8 4 0 0 4 4 4 2 FG-GAP repeat PliI PF16743.5 AID28351.1 - 0.0092 15.7 0.1 6.4 6.5 0.0 3.3 3 0 0 3 3 3 2 Periplasmic lysozyme inhibitor of I-type lysozyme LRR_4 PF12799.7 AID28352.1 - 1.7e-50 168.1 64.9 4e-06 27.1 1.7 13.2 7 3 7 15 15 15 15 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 AID28352.1 - 3.5e-32 110.0 53.9 1e-05 25.2 2.3 10.1 7 3 4 11 11 11 9 Leucine rich repeat LRR_9 PF14580.6 AID28352.1 - 2e-18 66.5 28.3 0.00026 20.6 1.9 6.9 3 2 4 7 7 7 7 Leucine-rich repeat LRR_6 PF13516.6 AID28352.1 - 3.6e-08 32.8 60.3 0.087 12.9 0.1 15.7 17 0 0 17 17 17 5 Leucine Rich repeat LRR_1 PF00560.33 AID28352.1 - 0.057 14.0 44.1 32 5.6 0.0 14.5 10 5 2 12 12 12 0 Leucine Rich Repeat DNA_PPF PF02916.15 AID28352.1 - 0.12 12.8 1.3 3.1 8.2 0.1 2.9 2 1 1 3 3 3 0 DNA polymerase processivity factor RicinB_lectin_2 PF14200.6 AID28353.1 - 1.2e-49 167.0 24.4 8.4e-12 45.7 0.2 4.7 1 1 5 6 6 6 6 Ricin-type beta-trefoil lectin domain-like Ricin_B_lectin PF00652.22 AID28353.1 - 1.1e-29 103.3 9.5 6.5e-16 58.7 2.0 2.5 2 0 0 2 2 2 2 Ricin-type beta-trefoil lectin domain LRR_4 PF12799.7 AID28353.1 - 1.7e-16 60.0 6.6 1.5e-05 25.2 0.9 4.6 1 1 3 5 5 5 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 AID28353.1 - 1.9e-10 40.3 8.5 4e-05 23.3 1.7 3.0 2 1 1 3 3 3 3 Leucine rich repeat CDtoxinA PF03498.14 AID28353.1 - 1.4e-08 34.5 6.2 0.0055 16.3 0.2 4.1 1 1 2 4 4 4 3 Cytolethal distending toxin A/C domain LRR_9 PF14580.6 AID28353.1 - 7.2e-06 25.6 4.2 6.5e-05 22.5 1.2 2.2 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 AID28353.1 - 1.3e-05 24.9 14.1 0.61 10.3 0.2 6.0 6 0 0 6 6 6 3 Leucine Rich repeat DUF4178 PF13785.6 AID28353.1 - 0.028 14.6 0.0 0.14 12.3 0.0 2.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4178) LRR_1 PF00560.33 AID28353.1 - 0.23 12.1 2.2 51 5.0 0.2 4.7 4 1 0 4 4 4 0 Leucine Rich Repeat DUF3316 PF11777.8 AID28357.1 - 0.015 15.4 0.3 0.051 13.6 0.3 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) MKT1_N PF12247.8 AID28358.1 - 0.06 13.7 0.0 0.16 12.3 0.0 1.7 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication Thiolase_N PF00108.23 AID28360.1 - 2.4e-97 325.4 0.3 3.1e-97 325.0 0.3 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID28360.1 - 2.4e-48 162.8 0.8 4.2e-48 162.0 0.8 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 AID28360.1 - 1.4e-06 28.0 2.5 3.5e-06 26.8 1.7 2.0 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain AMP-binding PF00501.28 AID28361.1 - 2.1e-49 168.3 0.0 2.7e-49 167.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 AID28361.1 - 6.6e-07 29.2 0.0 1.5e-06 28.0 0.0 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 AID28361.1 - 0.00016 22.6 0.0 0.00052 20.9 0.0 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Thiolase_C PF02803.18 AID28362.1 - 8.5e-06 25.4 1.1 0.00096 18.8 0.4 2.5 2 0 0 2 2 2 2 Thiolase, C-terminal domain Thiolase_N PF00108.23 AID28362.1 - 0.00067 19.1 0.1 0.0011 18.3 0.1 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain MaoC_dehydratas PF01575.19 AID28363.1 - 1.2e-16 60.4 0.0 1.8e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain DUF35_N PF12172.8 AID28363.1 - 2.7e-16 59.1 3.7 4.8e-16 58.3 3.7 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 AID28363.1 - 3.3e-13 49.4 0.9 6.8e-13 48.4 0.1 2.1 2 0 0 2 2 2 1 DUF35 OB-fold domain, acyl-CoA-associated MaoC_dehydrat_N PF13452.6 AID28363.1 - 0.00016 21.8 0.0 0.00044 20.4 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase MFS_1 PF07690.16 AID28364.1 - 3e-24 85.6 85.9 3e-20 72.4 48.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 AID28364.1 - 0.00028 19.6 9.4 0.00028 19.6 9.4 2.7 2 1 1 3 3 3 1 MFS/sugar transport protein OATP PF03137.20 AID28364.1 - 0.015 13.6 1.6 0.035 12.4 1.6 1.5 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family UTRA PF07702.13 AID28365.1 - 6.4e-31 107.1 0.0 8.8e-31 106.6 0.0 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 AID28365.1 - 2e-14 53.0 0.1 5.4e-14 51.6 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 AID28365.1 - 0.029 14.3 0.0 0.065 13.2 0.0 1.6 1 0 0 1 1 1 0 HTH domain adh_short_C2 PF13561.6 AID28366.1 - 2.2e-70 236.9 1.0 2.6e-70 236.6 1.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28366.1 - 5.4e-54 182.6 2.0 6.4e-54 182.4 2.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28366.1 - 1.1e-13 51.5 1.2 1.6e-13 51.0 1.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28366.1 - 0.078 12.4 0.5 0.13 11.7 0.5 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Methyltransf_25 PF13649.6 AID28366.1 - 0.091 13.5 0.1 0.16 12.7 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain HEAT_PBS PF03130.16 AID28366.1 - 0.13 13.0 2.5 0.37 11.6 0.5 2.7 2 1 1 3 3 3 0 PBS lyase HEAT-like repeat ADH_zinc_N PF00107.26 AID28366.1 - 0.23 11.5 2.2 0.25 11.3 0.8 1.7 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Aldolase_II PF00596.21 AID28367.1 - 5.9e-46 156.7 0.4 7e-46 156.5 0.4 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Peripla_BP_4 PF13407.6 AID28368.1 - 4.8e-49 167.3 5.1 6.6e-49 166.8 5.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28368.1 - 6.3e-08 32.4 0.1 1e-07 31.7 0.1 1.3 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID28368.1 - 2.8e-06 27.7 0.0 1.7e-05 25.2 0.0 2.0 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Flavodoxin_1 PF00258.25 AID28368.1 - 0.0032 17.7 0.0 0.0059 16.8 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin ABC_tran PF00005.27 AID28369.1 - 8.3e-51 172.1 0.2 3.3e-27 95.7 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28369.1 - 3.1e-11 43.6 0.3 0.0034 17.2 0.1 3.1 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 AID28369.1 - 0.00012 21.8 5.0 0.012 15.4 3.7 2.8 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 AID28369.1 - 0.00028 20.4 2.1 1.7 8.0 0.1 3.1 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID28369.1 - 0.00056 20.3 1.5 0.0093 16.4 1.5 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 AID28369.1 - 0.0012 18.2 0.0 0.0025 17.1 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 AID28369.1 - 0.004 17.6 0.7 0.014 15.7 0.3 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 AID28369.1 - 0.008 15.9 0.2 0.008 15.9 0.2 2.3 3 0 0 3 3 3 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28369.1 - 0.016 15.8 0.1 0.035 14.6 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID28369.1 - 0.016 14.9 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 AID28369.1 - 0.032 13.6 0.0 0.09 12.2 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 AID28369.1 - 0.034 14.1 1.2 0.062 13.2 0.2 1.9 2 0 0 2 2 2 0 RsgA GTPase Rad17 PF03215.15 AID28369.1 - 0.051 13.5 0.1 0.12 12.2 0.0 1.6 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_22 PF13401.6 AID28369.1 - 0.052 13.8 1.5 7 6.9 0.1 2.4 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 AID28369.1 - 0.14 11.1 2.3 0.24 10.4 0.2 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC_ATPase PF09818.9 AID28369.1 - 0.57 8.9 3.2 14 4.3 0.2 3.1 3 1 0 3 3 3 0 Predicted ATPase of the ABC class BPD_transp_2 PF02653.16 AID28370.1 - 2e-25 89.5 50.4 2e-25 89.5 50.4 2.1 1 1 1 2 2 2 2 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28371.1 - 7.7e-34 117.1 38.4 7.7e-34 117.1 38.4 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component PfkB PF00294.24 AID28372.1 - 5.8e-40 137.5 0.0 7.3e-40 137.1 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase adh_short_C2 PF13561.6 AID28373.1 - 1.9e-66 224.0 3.6 2.2e-66 223.8 3.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28373.1 - 7.7e-60 201.7 3.2 9.1e-60 201.5 3.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28373.1 - 1.1e-14 54.8 2.5 1.4e-14 54.4 2.5 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28373.1 - 0.00028 20.4 0.3 0.0013 18.2 0.3 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 AID28373.1 - 0.004 16.5 0.8 0.0065 15.8 0.1 1.7 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 2-Hacid_dh_C PF02826.19 AID28373.1 - 0.016 14.6 0.2 0.026 13.9 0.2 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XdhC_C PF13478.6 AID28373.1 - 0.04 14.4 0.1 0.075 13.5 0.1 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain DUF1776 PF08643.10 AID28373.1 - 0.064 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) NAD_binding_10 PF13460.6 AID28373.1 - 0.091 12.7 3.1 0.14 12.0 3.1 1.4 1 1 0 1 1 1 0 NAD(P)H-binding 3HCDH_N PF02737.18 AID28373.1 - 0.29 11.0 1.8 0.21 11.5 0.2 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 AID28374.1 - 5.1e-17 62.2 0.2 6.6e-17 61.8 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28374.1 - 7.4e-06 25.5 0.0 1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase SGL PF08450.12 AID28375.1 - 1.6e-50 172.0 0.0 1.8e-50 171.8 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 AID28375.1 - 6.4e-06 25.9 4.2 0.0011 18.9 0.0 4.1 4 0 0 4 4 4 1 NHL repeat Str_synth PF03088.16 AID28375.1 - 0.0016 18.6 0.0 1.5 9.0 0.0 3.1 2 1 0 2 2 2 2 Strictosidine synthase Arylesterase PF01731.20 AID28375.1 - 0.042 14.0 0.0 0.1 12.8 0.0 1.7 1 1 0 1 1 1 0 Arylesterase BPD_transp_2 PF02653.16 AID28376.1 - 1.6e-38 132.4 42.8 2.1e-38 132.1 42.8 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28377.1 - 5.8e-37 127.3 41.5 5.8e-37 127.3 41.5 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28378.1 - 7.5e-46 156.0 0.0 1.9e-30 106.2 0.0 2.1 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28378.1 - 3.6e-05 23.7 0.4 0.0069 16.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 AID28378.1 - 0.00052 19.8 0.3 0.0037 17.0 0.2 2.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID28378.1 - 0.00071 19.9 0.2 1.2 9.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.19 AID28378.1 - 0.00072 19.1 0.1 0.74 9.2 0.0 2.8 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28378.1 - 0.0038 16.9 0.0 0.0077 15.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28378.1 - 0.0062 17.1 0.0 0.0095 16.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID28378.1 - 0.0083 16.1 0.0 0.019 14.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 AID28378.1 - 0.018 14.6 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID28378.1 - 0.021 15.3 0.3 0.2 12.1 0.3 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 AID28378.1 - 0.029 14.6 0.0 1.6 9.0 0.0 2.4 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit CobA_CobO_BtuR PF02572.15 AID28378.1 - 0.057 13.7 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_25 PF13481.6 AID28378.1 - 0.074 12.6 0.1 10 5.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 AID28378.1 - 0.1 12.6 0.1 0.32 11.1 0.1 1.8 2 0 0 2 2 1 0 Helicase HerA, central domain MukB PF04310.12 AID28378.1 - 0.14 12.0 0.0 0.5 10.1 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal Zeta_toxin PF06414.12 AID28378.1 - 0.21 10.8 0.0 0.49 9.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_13 PF13166.6 AID28378.1 - 0.22 10.1 0.0 0.33 9.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain Peripla_BP_4 PF13407.6 AID28379.1 - 2.5e-39 135.4 14.5 3e-39 135.1 14.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain CoA_binding_2 PF13380.6 AID28379.1 - 0.024 15.1 0.2 0.21 12.1 0.1 2.3 2 0 0 2 2 2 0 CoA binding domain BPD_transp_2 PF02653.16 AID28380.1 - 2.1e-47 161.6 42.6 2.9e-47 161.1 42.6 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peptidase_S26 PF10502.9 AID28380.1 - 0.085 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Signal peptidase, peptidase S26 ABC_tran PF00005.27 AID28381.1 - 3e-52 176.8 0.0 4.5e-28 98.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28381.1 - 4e-09 36.7 0.9 0.02 14.7 0.0 3.4 4 0 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID28381.1 - 1.5e-05 24.6 0.7 0.0084 15.8 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID28381.1 - 0.0002 21.3 0.2 0.013 15.4 0.0 2.6 3 0 0 3 3 3 1 RsgA GTPase MMR_HSR1 PF01926.23 AID28381.1 - 0.0018 18.4 0.4 0.54 10.4 0.0 3.0 3 0 0 3 3 3 1 50S ribosome-binding GTPase AAA_30 PF13604.6 AID28381.1 - 0.0035 17.1 3.8 0.026 14.2 0.2 3.1 3 1 0 3 3 3 1 AAA domain AAA_16 PF13191.6 AID28381.1 - 0.005 17.2 0.1 0.47 10.8 0.0 2.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID28381.1 - 0.0056 17.0 1.3 1.6 9.0 0.2 3.7 3 1 0 3 3 3 1 AAA domain SMC_N PF02463.19 AID28381.1 - 0.023 14.1 0.0 2.7 7.4 0.0 2.9 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID28381.1 - 0.054 14.0 0.0 0.22 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AID28381.1 - 0.095 12.7 0.1 2.7 8.0 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 AID28381.1 - 0.1 11.9 0.4 4.8 6.5 0.1 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.9 AID28381.1 - 0.11 11.3 1.9 4.5 5.9 0.0 3.2 3 1 0 3 3 3 0 Predicted ATPase of the ABC class MukB PF04310.12 AID28381.1 - 0.14 11.9 0.1 0.5 10.1 0.0 1.9 2 0 0 2 2 2 0 MukB N-terminal NACHT PF05729.12 AID28381.1 - 0.15 11.9 0.2 0.58 10.1 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 AID28381.1 - 0.23 12.0 1.5 20 5.7 0.6 2.6 2 0 0 2 2 2 0 AAA domain Peripla_BP_4 PF13407.6 AID28382.1 - 6.7e-36 124.2 10.6 8.5e-36 123.8 10.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28382.1 - 5.1e-08 32.7 0.7 7.3e-08 32.2 0.7 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 AID28382.1 - 0.00077 19.2 0.1 0.00077 19.2 0.1 2.2 1 1 1 2 2 2 1 Periplasmic binding protein Bmp PF02608.14 AID28382.1 - 0.0083 15.1 0.0 0.23 10.4 0.0 2.2 1 1 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Peripla_BP_2 PF01497.18 AID28382.1 - 0.012 15.2 0.1 0.021 14.4 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein ATPgrasp_N PF18130.1 AID28382.1 - 0.014 16.0 0.9 1.5 9.5 0.0 2.9 2 1 1 3 3 3 0 ATP-grasp N-terminal domain Peripla_BP_3 PF13377.6 AID28382.1 - 0.018 15.4 0.2 0.055 13.8 0.1 1.8 1 1 0 1 1 1 0 Periplasmic binding protein-like domain Aldedh PF00171.22 AID28383.1 - 1.5e-162 541.3 0.1 1.7e-162 541.1 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PdxA PF04166.12 AID28384.1 - 4e-100 334.9 0.1 4.8e-100 334.6 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA SBD_N PF07005.11 AID28385.1 - 4.9e-22 78.8 2.5 5.1e-18 65.7 0.0 2.7 3 0 0 3 3 3 2 Sugar-binding N-terminal domain NBD_C PF17042.5 AID28385.1 - 1.2e-14 55.1 0.4 2.7e-14 54.1 0.4 1.6 1 0 0 1 1 1 1 Nucleotide-binding C-terminal domain PmoA PF14100.6 AID28385.1 - 0.14 11.6 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Methane oxygenase PmoA DeoRC PF00455.22 AID28386.1 - 7.3e-45 152.8 1.5 1e-44 152.3 1.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID28386.1 - 1e-17 63.6 0.3 1.7e-17 62.9 0.3 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 AID28386.1 - 7.6e-07 28.8 0.1 2.2e-06 27.3 0.1 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 AID28386.1 - 2.7e-06 27.2 0.2 1.8e-05 24.6 0.0 2.2 2 0 0 2 2 2 1 HTH domain MarR PF01047.22 AID28386.1 - 1e-05 25.3 0.0 3.1e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 MarR family GntR PF00392.21 AID28386.1 - 0.00034 20.2 0.2 0.0014 18.2 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 AID28386.1 - 0.0012 18.8 0.1 0.0043 17.1 0.1 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 AID28386.1 - 0.0038 16.7 1.0 0.0058 16.2 0.2 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 AID28386.1 - 0.017 14.8 0.0 0.043 13.6 0.0 1.7 1 0 0 1 1 1 0 LexA DNA binding domain HTH_Crp_2 PF13545.6 AID28386.1 - 0.026 14.5 0.5 0.061 13.3 0.1 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 AID28386.1 - 0.11 12.4 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Phage-MuB_C PF09077.11 AID28386.1 - 2.6 8.0 7.3 1.6 8.6 0.2 3.0 3 0 0 3 3 3 0 Mu B transposition protein, C terminal Peripla_BP_4 PF13407.6 AID28387.1 - 7.4e-46 156.8 1.8 8.8e-46 156.6 1.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28387.1 - 8.6e-22 77.9 0.0 1.1e-21 77.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID28387.1 - 9.5e-07 29.3 0.0 2.3e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 Periplasmic binding protein-like domain ABC_tran PF00005.27 AID28388.1 - 5.9e-40 136.9 0.0 1.1e-22 81.0 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28388.1 - 4.6e-06 26.7 0.0 0.034 14.0 0.0 3.1 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28388.1 - 0.00034 20.1 0.1 0.63 9.4 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID28388.1 - 0.00066 19.5 1.0 0.0045 16.7 0.3 2.4 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID28388.1 - 0.006 16.9 0.2 0.074 13.3 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID28388.1 - 0.02 15.4 0.0 0.032 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID28388.1 - 0.031 14.0 0.0 0.074 12.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 AID28388.1 - 0.088 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID28388.1 - 0.13 12.5 0.0 7 7.0 0.0 3.0 3 0 0 3 3 3 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 AID28388.1 - 0.23 11.1 0.0 0.32 10.6 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain BPD_transp_2 PF02653.16 AID28389.1 - 5.3e-43 147.1 42.5 5.3e-43 147.1 42.5 1.4 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component Aldo_ket_red PF00248.21 AID28390.1 - 1.8e-26 93.0 0.0 2.1e-26 92.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family K_trans PF02705.16 AID28391.1 - 5.6e-198 658.8 25.3 6.5e-198 658.6 25.3 1.0 1 0 0 1 1 1 1 K+ potassium transporter Aldedh PF00171.22 AID28393.1 - 1e-151 505.6 0.7 1.2e-151 505.4 0.7 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ADH_N PF08240.12 AID28394.1 - 2.9e-25 88.3 3.0 5.1e-25 87.5 3.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID28394.1 - 1.7e-22 79.8 2.3 2.9e-22 79.0 1.1 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID28394.1 - 3.2e-09 36.6 0.4 4.9e-09 36.0 0.4 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 AID28394.1 - 5.5e-06 27.5 0.0 2.7e-05 25.3 0.0 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase PALP PF00291.25 AID28394.1 - 0.0009 18.7 1.8 0.0014 18.1 1.8 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme AlaDh_PNT_C PF01262.21 AID28394.1 - 0.0048 16.2 3.3 0.0086 15.4 3.3 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Redoxin PF08534.10 AID28394.1 - 0.14 11.9 0.3 1.2 8.8 0.1 2.2 2 0 0 2 2 2 0 Redoxin Abhydrolase_3 PF07859.13 AID28395.1 - 7.1e-61 205.7 0.3 8.8e-61 205.4 0.3 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 AID28395.1 - 3.2e-11 42.7 0.0 4.1e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 AID28395.1 - 3.4e-05 22.9 0.0 0.0067 15.4 0.0 2.1 2 0 0 2 2 2 2 Carboxylesterase family Thioesterase PF00975.20 AID28395.1 - 0.00045 20.4 0.2 0.00067 19.8 0.2 1.2 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 AID28395.1 - 0.013 14.8 0.7 0.072 12.4 0.1 2.2 2 1 1 3 3 3 0 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID28395.1 - 0.018 14.5 0.0 0.052 13.0 0.0 1.9 1 1 0 1 1 1 0 Prolyl oligopeptidase family DUF2974 PF11187.8 AID28395.1 - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) BAAT_C PF08840.11 AID28395.1 - 0.17 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal PRiA4_ORF3 PF07929.11 AID28397.1 - 2.4e-08 33.9 0.0 2.8e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein GerE PF00196.19 AID28398.1 - 3e-08 33.1 0.1 4.2e-08 32.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 AID28398.1 - 0.0017 17.9 0.1 0.0046 16.5 0.1 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 AID28398.1 - 0.012 15.2 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 DUF1075 PF06388.11 AID28398.1 - 0.033 14.2 0.0 0.035 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) HTH_28 PF13518.6 AID28398.1 - 0.11 12.6 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Cupin_3 PF05899.12 AID28398.1 - 0.13 12.0 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Peptidase_C48 PF02902.19 AID28399.1 - 9.5e-07 28.9 0.0 2.4e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Rnk_N PF14760.6 AID28399.1 - 0.035 14.6 2.6 4.8 7.7 0.0 4.4 4 0 0 4 4 4 0 Rnk N-terminus FANC_SAP PF18081.1 AID28399.1 - 0.088 13.0 6.6 7 6.9 0.1 4.2 3 0 0 3 3 3 0 Fanconi anemia-associated nuclease SAP domain Mtf2_C PF14061.6 AID28400.1 - 0.049 13.8 0.1 0.077 13.2 0.1 1.3 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 DDE_Tnp_1_5 PF13737.6 AID28401.1 - 3.8e-27 94.8 0.1 6.6e-27 94.1 0.1 1.4 1 0 0 1 1 1 1 Transposase DDE domain SprT-like PF10263.9 AID28402.1 - 3.4e-09 36.5 0.0 4.7e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 SprT-like family Peptidase_M91 PF14891.6 AID28402.1 - 0.00012 22.4 0.0 0.00014 22.3 0.0 1.2 1 0 0 1 1 1 1 Effector protein DNA_RNApol_7kD PF03604.13 AID28402.1 - 0.0031 17.2 0.1 0.0052 16.4 0.1 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit BSP PF04450.12 AID28402.1 - 0.018 14.8 0.1 0.026 14.3 0.1 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria TF_Zn_Ribbon PF08271.12 AID28402.1 - 0.096 12.2 0.8 5.9 6.5 0.1 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding Peptidase_M76 PF09768.9 AID28402.1 - 0.1 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Peptidase M76 family GFA PF04828.14 AID28402.1 - 0.14 12.6 0.6 1.2 9.5 0.2 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-Mss51 PF13824.6 AID28402.1 - 0.18 11.9 2.2 0.4 10.8 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Nudix_N_2 PF14803.6 AID28402.1 - 0.68 9.9 2.6 3.1 7.8 0.1 2.6 3 0 0 3 3 3 0 Nudix N-terminal DDE_Tnp_1_6 PF13751.6 AID28403.1 - 3.6e-12 46.6 0.0 3.8e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 AID28403.1 - 0.00013 21.7 0.0 0.00014 21.6 0.0 1.0 1 0 0 1 1 1 1 Transposase DDE domain BssS PF13991.6 AID28403.1 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 BssS protein family Gp49 PF05973.14 AID28404.1 - 1.8e-13 50.5 0.1 2.1e-13 50.2 0.1 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) HTH_37 PF13744.6 AID28405.1 - 7.1e-24 83.6 0.0 8.2e-24 83.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID28405.1 - 5.7e-06 26.3 0.0 7.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID28405.1 - 0.00049 20.4 0.0 0.00081 19.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID28405.1 - 0.0014 18.1 0.1 0.0022 17.5 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 DUF134 PF02001.16 AID28405.1 - 0.011 16.3 0.0 0.013 16.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF134 UPF0175 PF03683.13 AID28405.1 - 0.029 14.1 0.1 0.043 13.5 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0175) HTH_26 PF13443.6 AID28405.1 - 0.036 14.5 0.0 0.055 13.9 0.0 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Aldo_ket_red PF00248.21 AID28407.1 - 1.3e-36 126.4 0.0 1.6e-36 126.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family adh_short_C2 PF13561.6 AID28408.1 - 5.2e-62 209.5 0.3 6.1e-62 209.2 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28408.1 - 5.6e-47 159.7 1.6 7e-47 159.4 1.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28408.1 - 4.9e-11 42.9 0.1 7.1e-11 42.3 0.1 1.3 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 AID28408.1 - 0.022 14.1 1.2 0.054 12.8 0.2 2.0 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 AID28408.1 - 0.034 13.6 0.2 0.054 13.0 0.1 1.5 2 1 0 2 2 2 0 NAD dependent epimerase/dehydratase family Amidohydro_1 PF01979.20 AID28409.1 - 5.7e-25 88.4 0.4 4e-23 82.3 0.4 2.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID28409.1 - 2.7e-18 66.7 5.4 1.3e-10 41.3 0.3 2.4 2 1 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 AID28409.1 - 0.025 14.9 0.1 0.057 13.8 0.1 1.6 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain Polysacc_deac_1 PF01522.21 AID28410.1 - 3.6e-07 30.1 0.1 1.2e-06 28.4 0.0 1.8 2 0 0 2 2 2 1 Polysaccharide deacetylase TPR_10 PF13374.6 AID28410.1 - 0.021 14.7 0.1 0.074 12.9 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat Epimerase PF01370.21 AID28411.1 - 3.4e-36 124.9 0.0 7.6e-36 123.8 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28411.1 - 2.2e-25 89.8 0.0 3.8e-25 89.0 0.0 1.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID28411.1 - 7.3e-11 41.7 0.0 2.2e-09 36.9 0.0 2.5 1 1 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 AID28411.1 - 3.5e-10 39.4 0.0 6.1e-10 38.6 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID28411.1 - 3e-08 33.1 0.0 4.7e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID28411.1 - 8.2e-07 28.4 0.0 4.8e-05 22.6 0.0 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 AID28411.1 - 1.7e-06 28.0 0.1 3.9e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 NAD(P)H-binding KR PF08659.10 AID28411.1 - 0.0023 17.9 0.0 0.0037 17.2 0.0 1.3 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 AID28411.1 - 0.0054 16.2 0.0 0.071 12.5 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID28412.1 - 1e-62 211.8 2.7 1.1e-62 211.6 2.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28412.1 - 8.5e-47 159.1 0.1 1.1e-46 158.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28412.1 - 2e-08 34.3 2.0 9.9e-08 32.1 2.0 1.9 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28412.1 - 0.015 14.7 0.1 0.022 14.2 0.1 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family MFS_1 PF07690.16 AID28413.1 - 2.1e-32 112.5 53.6 5.2e-18 65.1 23.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID28413.1 - 3.7e-10 39.3 20.9 4.4e-08 32.4 7.0 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 AID28413.1 - 8.7e-06 25.3 32.5 8.7e-06 25.3 32.5 1.6 1 1 1 2 2 2 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 AID28413.1 - 0.00044 18.9 10.4 0.00044 18.9 10.4 2.4 2 0 0 2 2 2 1 MFS/sugar transport protein TssN PF17555.2 AID28413.1 - 2.5 7.4 13.0 0.06 12.7 6.1 1.7 2 0 0 2 2 2 0 Type VI secretion system, TssN Ribonuc_L-PSP PF01042.21 AID28414.1 - 2.2e-21 76.1 0.0 2.4e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Amidohydro_1 PF01979.20 AID28415.1 - 5.6e-20 71.9 0.0 1.5e-19 70.5 0.0 1.7 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID28415.1 - 8.9e-14 51.8 11.2 1.7e-07 31.1 6.3 3.2 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_2 PF04909.14 AID28415.1 - 0.00021 21.2 1.2 0.00047 20.0 1.2 1.8 1 1 0 1 1 1 1 Amidohydrolase AP_endonuc_2 PF01261.24 AID28415.1 - 0.0098 15.4 0.2 0.026 14.0 0.2 1.7 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Usp PF00582.26 AID28415.1 - 0.057 13.9 0.1 0.12 12.9 0.1 1.5 1 0 0 1 1 1 0 Universal stress protein family TatD_DNase PF01026.21 AID28415.1 - 0.11 11.8 0.4 1.5 8.1 0.4 2.2 1 1 0 1 1 1 0 TatD related DNase CN_hydrolase PF00795.22 AID28416.1 - 3.2e-46 157.8 0.0 3.7e-46 157.6 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase FrhB_FdhB_C PF04432.13 AID28417.1 - 4.6e-26 91.5 0.0 8.7e-26 90.6 0.0 1.4 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 AID28417.1 - 3.5e-11 43.1 0.0 6.4e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 AID28417.1 - 0.078 12.8 1.9 0.2 11.5 1.9 1.7 1 0 0 1 1 1 0 4Fe-4S binding domain DAO PF01266.24 AID28418.1 - 9.9e-43 147.1 4.1 1.1e-42 146.9 4.1 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID28418.1 - 1.3e-05 25.3 1.2 3.9e-05 23.8 0.7 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID28418.1 - 3.9e-05 23.1 0.0 0.24 10.6 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID28418.1 - 0.00018 21.0 0.2 0.0004 19.8 0.2 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID28418.1 - 0.00028 20.2 0.2 0.0026 17.0 0.2 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID28418.1 - 0.0027 16.9 0.9 0.0027 16.9 0.9 2.2 2 1 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 AID28418.1 - 0.0047 16.2 0.2 0.0073 15.6 0.2 1.3 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 AID28418.1 - 0.0048 15.6 0.1 0.024 13.4 0.2 1.8 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 AID28418.1 - 0.0085 15.2 0.4 0.012 14.8 0.4 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 AID28418.1 - 0.018 14.3 0.1 0.028 13.7 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 AID28418.1 - 0.11 13.1 0.2 4.2 8.0 0.2 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Peptidase_M20 PF01546.28 AID28419.1 - 7.8e-27 94.3 0.6 1.1e-26 93.8 0.6 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 AID28419.1 - 1.1e-09 38.3 0.0 1.8e-08 34.3 0.0 2.1 2 0 0 2 2 2 1 Peptidase family M28 M20_dimer PF07687.14 AID28419.1 - 0.0032 17.3 0.0 0.015 15.2 0.0 2.0 2 1 1 3 3 3 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 AID28419.1 - 0.016 14.2 0.0 0.4 9.7 0.0 2.6 2 1 1 3 3 3 0 M42 glutamyl aminopeptidase Isochorismatase PF00857.20 AID28420.1 - 2.5e-37 128.8 0.0 3.1e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Ndr PF03096.14 AID28420.1 - 0.16 10.7 0.0 0.19 10.4 0.0 1.1 1 0 0 1 1 1 0 Ndr family Amidohydro_3 PF07969.11 AID28421.1 - 8.2e-40 137.7 1.0 1.2e-21 77.7 0.4 2.1 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 AID28421.1 - 4.1e-11 42.8 0.0 3.6e-05 23.2 0.0 2.4 2 1 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 AID28421.1 - 0.064 13.6 0.3 0.16 12.3 0.3 1.7 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain TatD_DNase PF01026.21 AID28421.1 - 0.079 12.3 0.0 0.11 11.8 0.0 1.4 1 1 0 1 1 1 0 TatD related DNase DUF2188 PF09954.9 AID28421.1 - 0.23 11.6 0.0 0.23 11.6 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2188) MTTB PF06253.11 AID28422.1 - 6.2e-212 704.0 0.6 7.1e-212 703.8 0.6 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) 2-Hacid_dh_C PF02826.19 AID28423.1 - 9.9e-50 168.4 0.0 1.3e-49 168.0 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 AID28423.1 - 6.1e-06 25.7 0.5 1.6e-05 24.3 0.5 1.6 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 AID28423.1 - 0.00097 19.3 0.0 0.0015 18.7 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 AID28423.1 - 0.0087 16.1 0.1 0.025 14.6 0.1 1.7 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh PF00389.30 AID28423.1 - 0.04 13.6 0.0 0.1 12.2 0.0 1.8 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.17 AID28423.1 - 0.18 12.4 0.5 0.64 10.6 0.5 2.0 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DHDPS PF00701.22 AID28424.1 - 2.8e-32 111.6 0.0 3.2e-32 111.4 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family SoxG PF04268.12 AID28425.1 - 1.8e-05 24.9 0.0 2.5e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family GCV_T PF01571.21 AID28426.1 - 2.7e-70 236.7 0.0 3.7e-70 236.2 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SO_alpha_A3 PF17806.1 AID28426.1 - 2.3e-33 114.4 0.0 4.7e-33 113.4 0.0 1.5 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_4 PF13510.6 AID28426.1 - 1.4e-22 79.5 0.0 5.6e-22 77.6 0.0 2.1 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain GCV_T_C PF08669.11 AID28426.1 - 2.1e-19 69.2 0.2 5.9e-18 64.6 0.0 3.0 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain FAD_oxidored PF12831.7 AID28426.1 - 5.2e-10 39.3 0.2 8.4e-10 38.6 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID28426.1 - 2.4e-09 36.8 1.9 1.5e-08 34.3 1.9 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID28426.1 - 2e-08 33.8 0.6 3.5e-06 26.3 0.8 2.5 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 AID28426.1 - 2.9e-06 26.8 0.3 0.02 14.2 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28426.1 - 3.6e-06 27.1 0.1 1.3e-05 25.4 0.1 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID28426.1 - 4.2e-06 25.7 0.3 8.2e-06 24.8 0.3 1.4 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 AID28426.1 - 4.3e-05 22.8 0.7 0.00077 18.7 1.8 2.0 1 1 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID28426.1 - 0.0003 20.1 0.1 0.00058 19.2 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 AID28426.1 - 0.00082 18.7 0.0 0.0018 17.6 0.0 1.5 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 AID28426.1 - 0.0012 18.1 0.4 0.0029 16.9 0.2 1.7 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 AID28426.1 - 0.004 16.8 0.4 0.013 15.1 0.5 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID28426.1 - 0.023 15.2 0.1 0.11 13.0 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SoxD PF04267.12 AID28427.1 - 9.5e-20 70.5 0.0 1.1e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 Sarcosine oxidase, delta subunit family DAO PF01266.24 AID28428.1 - 1.6e-58 199.0 3.2 1.9e-58 198.8 3.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID28428.1 - 1.6e-08 34.2 0.4 0.0014 17.9 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28428.1 - 1.7e-08 33.6 0.9 0.00014 20.7 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 AID28428.1 - 1.8e-07 30.6 8.5 7.3e-07 28.6 8.6 1.7 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID28428.1 - 3.1e-07 29.9 2.3 5.9e-06 25.7 2.3 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID28428.1 - 1e-06 28.2 0.1 0.0019 17.5 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 AID28428.1 - 1.7e-06 28.1 0.7 0.0025 17.8 0.0 2.2 2 0 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID28428.1 - 2e-06 27.9 0.4 5.8e-06 26.4 0.4 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 AID28428.1 - 0.00016 21.0 0.1 0.00028 20.2 0.1 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 AID28428.1 - 0.0099 16.4 8.8 0.065 13.8 0.1 2.8 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID28428.1 - 0.062 12.3 0.2 0.097 11.7 0.2 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein FAD_oxidored PF12831.7 AID28428.1 - 0.19 11.0 3.2 0.72 9.1 3.2 1.9 1 1 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID28428.1 - 0.99 8.2 3.1 0.4 9.5 0.4 1.6 2 0 0 2 2 2 0 Tryptophan halogenase MmgE_PrpD PF03972.14 AID28429.1 - 1.1e-74 251.6 10.2 2.1e-74 250.7 10.2 1.4 1 1 0 1 1 1 1 MmgE/PrpD family LysR_substrate PF03466.20 AID28431.1 - 6.2e-24 84.5 1.1 6.7e-24 84.4 0.2 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID28431.1 - 7.1e-18 64.3 0.1 1.7e-17 63.1 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID28431.1 - 0.012 15.5 0.0 0.84 9.6 0.0 3.0 3 0 0 3 3 3 0 MarR family HTH_20 PF12840.7 AID28431.1 - 0.03 14.4 0.1 0.12 12.4 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain RepB-RCR_reg PF10723.9 AID28431.1 - 0.074 13.0 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Replication regulatory protein RepB HTH_24 PF13412.6 AID28431.1 - 0.1 12.2 0.0 0.33 10.5 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 AID28431.1 - 0.11 12.4 0.1 0.26 11.2 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family SBP_bac_5 PF00496.22 AID28432.1 - 8.9e-67 225.7 0.4 1.1e-66 225.3 0.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle GCV_T PF01571.21 AID28433.1 - 2.8e-59 200.6 0.0 4e-59 200.1 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID28433.1 - 1.8e-53 182.4 1.1 2.6e-53 181.9 1.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAO_M PF16350.5 AID28433.1 - 2.5e-17 62.9 0.1 1.8e-16 60.2 0.2 2.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase central domain GCV_T_C PF08669.11 AID28433.1 - 4.2e-17 61.8 0.0 1.3e-16 60.3 0.0 1.8 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID28433.1 - 4.5e-08 33.4 0.0 1.5e-07 31.7 0.0 1.9 2 0 0 2 2 2 1 Sarcosine oxidase, gamma subunit family Pyr_redox_3 PF13738.6 AID28433.1 - 0.00066 19.0 0.0 1.2 8.3 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID28433.1 - 0.012 16.2 0.0 0.045 14.3 0.1 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28433.1 - 0.018 15.2 2.8 0.03 14.6 0.1 2.7 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID28433.1 - 0.028 13.7 0.0 0.17 11.1 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SGL PF08450.12 AID28434.1 - 1.1e-34 120.1 0.0 1.3e-34 119.9 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 AID28434.1 - 0.0011 19.1 0.0 0.0059 16.8 0.0 2.2 2 0 0 2 2 2 1 Arylesterase Str_synth PF03088.16 AID28434.1 - 0.0031 17.6 0.0 0.027 14.6 0.0 2.5 3 1 0 3 3 3 1 Strictosidine synthase NHL PF01436.21 AID28434.1 - 0.025 14.6 0.0 17 5.7 0.0 4.0 5 0 0 5 5 5 0 NHL repeat Reg_prop PF07494.11 AID28434.1 - 0.11 12.8 0.0 33 5.2 0.0 3.8 3 0 0 3 3 3 0 Two component regulator propeller Polysacc_deac_1 PF01522.21 AID28436.1 - 2.7e-08 33.7 0.0 6.1e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Polysaccharide deacetylase Aminotran_1_2 PF00155.21 AID28437.1 - 7.3e-47 160.3 0.0 8.2e-47 160.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 AID28437.1 - 0.0011 17.9 0.0 0.0018 17.2 0.0 1.3 1 1 0 1 1 1 1 Allinase Aminotran_5 PF00266.19 AID28437.1 - 0.0041 16.1 0.0 0.011 14.7 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AID28437.1 - 0.015 13.8 0.0 0.024 13.1 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme BKACE PF05853.12 AID28438.1 - 3.3e-05 23.3 0.0 3.3e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme MR_MLE_C PF13378.6 AID28440.1 - 4.4e-34 118.0 0.1 6.7e-34 117.4 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28440.1 - 0.0002 21.6 0.0 0.00035 20.7 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FCD PF07729.12 AID28441.1 - 2.6e-18 66.6 8.7 4.3e-18 65.9 8.7 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28441.1 - 5.8e-10 38.7 0.0 1.3e-09 37.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID28441.1 - 0.00011 21.6 0.2 0.00042 19.8 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding SBP_bac_1 PF01547.25 AID28442.1 - 7e-30 105.1 3.8 9.4e-30 104.6 3.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID28442.1 - 8.4e-25 88.1 1.7 1.1e-24 87.7 1.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Porin_3 PF01459.22 AID28442.1 - 0.0044 16.5 0.4 0.0062 16.0 0.4 1.2 1 0 0 1 1 1 1 Eukaryotic porin BPD_transp_1 PF00528.22 AID28443.1 - 1.5e-14 54.2 16.4 1.5e-14 54.2 16.4 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28444.1 - 2.4e-15 56.7 18.8 2.4e-15 56.7 18.8 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2781 PF10914.8 AID28444.1 - 3.6 8.0 12.6 10 6.5 3.6 3.3 2 2 0 2 2 2 0 Protein of unknown function (DUF2781) ABC_tran PF00005.27 AID28445.1 - 4.3e-30 105.0 0.0 5.4e-30 104.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28445.1 - 4.6e-07 29.9 1.3 0.017 14.9 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID28445.1 - 3.5e-05 23.8 0.1 6e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 AID28445.1 - 0.00032 20.4 0.0 0.00059 19.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28445.1 - 0.00041 20.9 0.0 0.00058 20.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID28445.1 - 0.00054 20.2 0.2 0.0012 19.2 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28445.1 - 0.0014 19.1 0.5 0.0022 18.4 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID28445.1 - 0.0015 18.0 0.0 1.2 8.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID28445.1 - 0.0016 18.2 0.0 0.002 17.9 0.0 1.3 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID28445.1 - 0.0099 15.8 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain FeoB_N PF02421.18 AID28445.1 - 0.022 14.3 0.1 0.67 9.5 0.1 2.5 3 0 0 3 3 3 0 Ferrous iron transport protein B ATPase_2 PF01637.18 AID28445.1 - 0.052 13.4 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 AID28445.1 - 0.06 13.3 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 AID28445.1 - 0.062 13.5 0.2 0.18 12.0 0.1 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 AID28445.1 - 0.08 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 AID28445.1 - 0.086 13.4 0.1 0.11 13.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID28445.1 - 0.089 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.6 AID28445.1 - 0.098 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 AID28445.1 - 0.1 12.7 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 AID28445.1 - 0.11 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID28445.1 - 0.14 12.6 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 AID28445.1 - 0.27 10.4 0.0 0.26 10.4 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit TOBE PF03459.17 AID28446.1 - 1.3e-12 47.8 0.3 5.5e-12 45.8 0.1 2.0 2 0 0 2 2 2 1 TOBE domain OB_MalK PF17912.1 AID28446.1 - 2.8e-12 47.3 0.1 5.6e-12 46.3 0.1 1.5 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 AID28446.1 - 5.7e-09 36.0 0.1 1e-08 35.2 0.1 1.5 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 AID28446.1 - 0.0071 16.9 0.1 0.021 15.4 0.1 1.9 1 0 0 1 1 1 1 CysA C-terminal regulatory domain GMC_oxred_N PF00732.19 AID28447.1 - 2.2e-81 273.5 0.0 2.9e-81 273.1 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID28447.1 - 4e-37 127.9 0.9 6.6e-37 127.2 0.9 1.4 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID28447.1 - 1.6e-05 24.2 0.0 0.087 11.9 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 AID28447.1 - 5.4e-05 22.4 0.1 8.1e-05 21.8 0.1 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein DAO PF01266.24 AID28447.1 - 6e-05 22.8 0.2 0.013 15.2 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID28447.1 - 8.3e-05 21.9 0.0 0.026 13.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28447.1 - 0.00075 19.7 0.1 0.0024 18.0 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID28447.1 - 0.011 15.0 0.0 2.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID28447.1 - 0.051 12.8 0.0 0.086 12.1 0.0 1.3 1 0 0 1 1 1 0 Thi4 family HI0933_like PF03486.14 AID28447.1 - 0.085 11.5 0.0 0.2 10.3 0.0 1.6 2 0 0 2 2 2 0 HI0933-like protein Esterase PF00756.20 AID28449.1 - 8.9e-53 179.5 0.0 1.1e-52 179.2 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 AID28449.1 - 2.9e-05 23.4 0.0 4.2e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Chlorophyllase2 PF12740.7 AID28449.1 - 4.5e-05 22.5 0.0 6.3e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Peptidase_S9 PF00326.21 AID28449.1 - 8.2e-05 22.2 0.0 0.00014 21.4 0.0 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family Esterase_phd PF10503.9 AID28449.1 - 0.0015 18.1 0.0 0.0044 16.5 0.0 1.7 1 1 0 1 1 1 1 Esterase PHB depolymerase Abhydrolase_6 PF12697.7 AID28449.1 - 0.0025 18.5 0.8 0.0034 18.0 0.8 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID28449.1 - 0.0026 17.4 0.0 0.0043 16.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 AID28449.1 - 0.015 15.2 0.1 0.049 13.5 0.0 2.0 2 1 0 2 2 2 0 alpha/beta hydrolase fold Chlorophyllase PF07224.11 AID28449.1 - 0.017 14.1 0.0 0.035 13.1 0.0 1.4 2 0 0 2 2 2 0 Chlorophyllase adh_short_C2 PF13561.6 AID28450.1 - 0.00061 19.4 0.0 0.00068 19.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DAO PF01266.24 AID28451.1 - 6.3e-56 190.5 8.1 7.3e-56 190.2 8.1 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID28451.1 - 3.4e-06 26.4 4.2 1.3e-05 24.5 0.4 2.3 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 AID28451.1 - 4.2e-06 26.2 0.1 0.056 12.7 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28451.1 - 4.7e-06 26.7 0.1 4.4e-05 23.6 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 AID28451.1 - 7e-06 25.6 0.1 0.0035 16.7 0.1 2.1 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 AID28451.1 - 1.2e-05 24.8 0.7 9e-05 21.8 0.4 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28451.1 - 0.00014 20.8 1.5 0.033 12.9 0.9 2.3 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 AID28451.1 - 0.00024 20.5 0.4 0.00056 19.3 0.4 1.6 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 AID28451.1 - 0.00059 19.8 1.5 0.08 12.9 0.2 3.1 2 1 0 2 2 2 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 AID28451.1 - 0.0012 19.3 0.1 0.0028 18.2 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AID28451.1 - 0.019 15.4 0.0 0.08 13.4 0.0 2.0 1 1 0 1 1 1 0 Putative NAD(P)-binding Thi4 PF01946.17 AID28451.1 - 0.024 13.9 0.7 0.039 13.2 0.7 1.2 1 0 0 1 1 1 0 Thi4 family AlaDh_PNT_C PF01262.21 AID28451.1 - 0.029 13.7 0.8 0.053 12.8 0.8 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 AID28451.1 - 0.059 12.9 0.0 0.088 12.4 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 AID28451.1 - 0.065 12.6 0.4 0.72 9.1 0.5 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID28451.1 - 0.15 12.0 0.6 0.86 9.5 0.3 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aminotran_1_2 PF00155.21 AID28452.1 - 6.2e-52 177.0 0.0 7e-52 176.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 AID28452.1 - 0.072 12.0 0.0 0.17 10.8 0.0 1.5 2 1 0 2 2 2 0 Allinase Aminotran_5 PF00266.19 AID28452.1 - 0.085 11.8 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V adh_short_C2 PF13561.6 AID28453.1 - 1.4e-64 217.9 3.7 1.5e-64 217.7 3.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28453.1 - 9.4e-57 191.6 0.8 1.2e-56 191.3 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28453.1 - 2.5e-08 34.0 1.2 3.8e-08 33.5 1.2 1.3 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 AID28453.1 - 0.0018 17.6 0.1 0.0068 15.7 0.1 1.8 1 1 1 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 AID28453.1 - 0.0022 17.5 0.1 0.0063 16.0 0.1 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Glyco_transf_5 PF08323.11 AID28453.1 - 0.022 14.5 0.0 0.89 9.2 0.0 2.1 2 0 0 2 2 2 0 Starch synthase catalytic domain 2-Hacid_dh_C PF02826.19 AID28453.1 - 0.029 13.7 0.0 0.8 9.0 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Histidinol_dh PF00815.20 AID28454.1 - 4e-130 434.5 0.3 4.7e-130 434.3 0.3 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase ADH_N PF08240.12 AID28455.1 - 6.5e-31 106.5 3.0 3.3e-30 104.2 1.5 2.1 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID28455.1 - 1.6e-09 37.8 0.2 3.8e-09 36.6 0.2 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID28455.1 - 4.4e-06 26.3 0.1 5.8e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Sacchrp_dh_NADP PF03435.18 AID28455.1 - 3.1e-05 24.2 0.2 5.4e-05 23.4 0.2 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 AID28455.1 - 0.0011 19.1 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 AID28455.1 - 0.015 15.0 0.2 0.024 14.3 0.2 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 AID28455.1 - 0.049 13.9 0.0 0.082 13.2 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain FAD_binding_3 PF01494.19 AID28455.1 - 0.13 11.5 0.3 0.17 11.1 0.3 1.1 1 0 0 1 1 1 0 FAD binding domain UTRA PF07702.13 AID28456.1 - 3.4e-32 111.2 0.0 4.4e-32 110.9 0.0 1.1 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 AID28456.1 - 1.6e-18 66.1 0.0 3.3e-18 65.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 AID28456.1 - 0.00017 21.3 0.0 0.00035 20.3 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID28456.1 - 0.00028 20.8 0.0 0.00066 19.6 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 AID28456.1 - 0.0064 16.0 0.0 0.031 13.8 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID28456.1 - 0.0094 15.8 0.1 0.021 14.7 0.1 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID28456.1 - 0.014 15.3 0.0 0.029 14.3 0.0 1.5 1 0 0 1 1 1 0 MarR family RP-C PF03428.13 AID28456.1 - 0.034 13.8 0.0 0.058 13.0 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_IclR PF09339.10 AID28456.1 - 0.049 13.4 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID28456.1 - 0.051 13.6 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 AID28456.1 - 0.13 12.2 0.0 0.46 10.4 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB NMT1 PF09084.11 AID28458.1 - 3e-24 86.2 0.7 5.1e-24 85.4 0.7 1.3 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 AID28458.1 - 6.5e-19 68.6 2.1 9.4e-19 68.1 2.1 1.2 1 0 0 1 1 1 1 NMT1-like family SBP_bac_3 PF00497.20 AID28458.1 - 8.3e-09 35.2 1.3 5.2e-06 26.1 0.1 2.3 1 1 1 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 AID28458.1 - 5.5e-06 26.2 1.0 8.7e-06 25.5 1.0 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein OpuAC PF04069.12 AID28458.1 - 2e-05 24.3 2.2 2.7e-05 23.9 1.0 1.8 1 1 1 2 2 2 1 Substrate binding domain of ABC-type glycine betaine transport system Lipoprotein_9 PF03180.14 AID28458.1 - 0.00021 20.5 0.3 0.00041 19.5 0.0 1.6 2 0 0 2 2 2 1 NLPA lipoprotein HmuY PF14064.6 AID28458.1 - 0.13 12.5 0.4 1.1 9.5 0.4 2.2 1 1 0 1 1 1 0 HmuY protein BPD_transp_1 PF00528.22 AID28459.1 - 2e-21 76.6 10.6 2e-21 76.6 10.6 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Asp4 PF16996.5 AID28459.1 - 0.15 11.8 0.5 9 6.2 0.5 2.9 3 0 0 3 3 3 0 Accessory secretory protein Sec Asp4 ABC_tran PF00005.27 AID28460.1 - 4.8e-29 101.6 0.0 7e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28460.1 - 7.2e-08 32.6 0.3 0.0019 18.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID28460.1 - 0.00045 20.2 0.0 0.001 19.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA PF00004.29 AID28460.1 - 0.00052 20.4 0.0 0.0043 17.5 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID28460.1 - 0.00098 18.6 0.1 0.42 10.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 AID28460.1 - 0.0026 18.0 0.1 0.62 10.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID28460.1 - 0.014 15.1 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 AID28460.1 - 0.016 15.5 0.1 0.066 13.5 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 AID28460.1 - 0.03 13.5 0.0 0.07 12.3 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_33 PF13671.6 AID28460.1 - 0.035 14.3 0.2 0.21 11.7 0.2 2.0 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 AID28460.1 - 0.038 12.8 0.0 0.22 10.3 0.0 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_24 PF13479.6 AID28460.1 - 0.039 13.7 0.2 0.63 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID28460.1 - 0.054 13.1 0.1 0.26 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 AID28460.1 - 0.06 13.7 0.3 0.1 13.0 0.3 1.6 1 1 0 1 1 1 0 AAA ATPase domain PhoH PF02562.16 AID28460.1 - 0.073 12.5 0.0 0.64 9.4 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_15 PF13175.6 AID28460.1 - 0.092 12.4 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AID28460.1 - 0.11 12.8 0.8 0.43 10.9 0.8 1.9 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 AID28460.1 - 0.12 11.7 0.1 13 5.0 0.0 2.2 2 0 0 2 2 2 0 KaiC MFS_1 PF07690.16 AID28463.1 - 7.8e-50 169.8 52.2 9.5e-50 169.5 47.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 AID28463.1 - 2.9e-08 32.6 9.6 2.9e-08 32.6 9.6 1.8 2 1 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_3 PF05977.13 AID28463.1 - 0.00055 18.5 7.9 0.00055 18.5 7.9 2.4 2 1 0 2 2 2 1 Transmembrane secretion effector ABC_tran PF00005.27 AID28464.1 - 2e-11 44.5 0.0 3e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_ATPase PF09818.9 AID28464.1 - 0.015 14.1 0.0 0.022 13.6 0.0 1.4 1 1 0 1 1 1 0 Predicted ATPase of the ABC class SMC_N PF02463.19 AID28464.1 - 0.044 13.2 0.0 0.052 13.0 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID28464.1 - 0.092 13.0 0.2 1.8 8.9 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Peptidase_S66C PF17676.1 AID28464.1 - 0.1 13.1 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain ABC_membrane PF00664.23 AID28465.1 - 9.5e-37 127.1 13.2 1.1e-36 126.9 13.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_membrane_3 PF13748.6 AID28465.1 - 1.2 8.3 15.4 1.1 8.5 10.1 2.7 2 1 0 2 2 2 0 ABC transporter transmembrane region ABC_membrane PF00664.23 AID28466.1 - 8.7e-39 133.8 11.3 1.1e-38 133.5 11.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 AID28466.1 - 1.7e-31 109.6 0.0 3.4e-31 108.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID28466.1 - 9.5e-05 21.9 0.0 0.027 13.9 0.0 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID28466.1 - 0.0023 18.3 0.0 0.0094 16.3 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 AID28466.1 - 0.0062 16.3 0.0 0.014 15.1 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 AID28466.1 - 0.0068 16.8 0.0 0.053 14.0 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID28466.1 - 0.038 14.2 0.1 0.13 12.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID28466.1 - 0.042 14.4 0.1 0.093 13.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID28466.1 - 0.051 12.9 0.0 0.12 11.6 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_29 PF13555.6 AID28466.1 - 0.052 13.3 0.2 0.16 11.7 0.2 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 AID28466.1 - 0.2 10.8 0.0 0.45 9.7 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_15 PF13175.6 AID28466.1 - 0.28 10.9 0.0 0.42 10.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain TOH_N PF12549.8 AID28467.1 - 0.042 13.7 0.4 0.055 13.3 0.4 1.2 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal DAO PF01266.24 AID28468.1 - 3e-69 234.3 3.2 3.5e-69 234.0 3.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID28468.1 - 1.5e-08 34.2 0.2 0.00014 21.2 0.0 2.8 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID28468.1 - 2e-08 33.7 4.6 2.8e-08 33.3 4.6 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AID28468.1 - 1.4e-06 28.4 0.0 7.2e-06 26.1 0.0 2.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID28468.1 - 6.4e-06 25.8 0.5 1.7e-05 24.4 0.5 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 AID28468.1 - 4e-05 22.9 0.6 0.00093 18.4 0.6 2.2 1 1 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 AID28468.1 - 5.9e-05 23.5 0.7 0.00058 20.4 0.9 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28468.1 - 0.00029 19.7 0.8 0.01 14.6 0.2 2.2 2 0 0 2 2 2 1 HI0933-like protein Trp_halogenase PF04820.14 AID28468.1 - 0.0003 19.8 1.1 0.17 10.7 0.7 2.2 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 AID28468.1 - 0.0012 18.2 0.4 0.0026 17.1 0.4 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 AID28468.1 - 0.0047 16.2 0.1 0.01 15.1 0.1 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID28468.1 - 0.027 13.7 0.2 0.055 12.7 0.2 1.4 1 0 0 1 1 1 0 Thi4 family 3HCDH_N PF02737.18 AID28468.1 - 0.031 14.2 0.1 0.054 13.4 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 AID28468.1 - 0.061 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Mqo PF06039.15 AID28468.1 - 0.067 11.7 0.1 0.091 11.3 0.1 1.1 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) Lycopene_cycl PF05834.12 AID28468.1 - 0.12 11.4 0.9 0.16 11.0 0.1 1.6 2 0 0 2 2 2 0 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 AID28469.1 - 1.9e-30 105.5 0.0 3.5e-30 104.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 AID28469.1 - 1.8e-07 30.9 0.2 2.7e-07 30.3 0.2 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 AID28469.1 - 0.00024 21.3 0.1 0.0044 17.3 0.1 2.3 2 0 0 2 2 2 1 TrkA-N domain AdoHcyase_NAD PF00670.21 AID28469.1 - 0.00068 19.7 0.3 0.0022 18.1 0.3 1.7 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 AID28469.1 - 0.00095 19.4 0.1 0.0021 18.2 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 AID28469.1 - 0.0028 16.9 0.0 0.0048 16.2 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 AID28469.1 - 0.0047 17.5 0.2 0.0047 17.5 0.2 1.8 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent PALP PF00291.25 AID28469.1 - 0.013 14.9 0.1 0.021 14.2 0.1 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Oxidored_nitro PF00148.19 AID28469.1 - 0.019 13.7 0.1 0.038 12.7 0.0 1.5 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase Pyr_redox PF00070.27 AID28469.1 - 0.022 15.3 0.1 0.057 14.0 0.1 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ELFV_dehydrog PF00208.21 AID28469.1 - 0.038 13.7 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XdhC_C PF13478.6 AID28469.1 - 0.065 13.7 0.1 0.13 12.8 0.1 1.5 1 0 0 1 1 1 0 XdhC Rossmann domain Sacchrp_dh_NADP PF03435.18 AID28469.1 - 0.088 13.1 0.0 0.38 11.0 0.1 2.0 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 AID28469.1 - 0.11 12.4 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID28469.1 - 0.14 12.2 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase OTCace PF00185.24 AID28469.1 - 0.2 11.7 0.0 0.44 10.6 0.0 1.5 1 1 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF900 PF05990.12 AID28470.1 - 2.5e-64 217.0 0.0 3.1e-64 216.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 AID28470.1 - 1e-05 26.3 2.1 1.4e-05 25.9 2.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Lyase_aromatic PF00221.19 AID28471.1 - 2.9e-131 438.3 7.3 3.4e-131 438.1 7.3 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase ADH_zinc_N PF00107.26 AID28472.1 - 2.2e-21 76.2 0.4 4.3e-21 75.3 0.4 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID28472.1 - 1.5e-14 55.2 0.2 2.7e-14 54.4 0.2 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID28472.1 - 1.4e-12 47.5 1.5 1.2e-11 44.5 0.7 2.6 2 1 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain DUF4350 PF14258.6 AID28472.1 - 0.091 13.2 0.2 0.41 11.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4350) DUF2855 PF11017.8 AID28472.1 - 0.18 11.5 0.0 0.28 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) Aminotran_3 PF00202.21 AID28473.1 - 2.2e-82 276.9 0.0 2.6e-82 276.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aldedh PF00171.22 AID28474.1 - 3.6e-166 553.3 0.6 4.1e-166 553.1 0.6 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family IgG_binding_B PF01378.17 AID28474.1 - 0.48 10.5 2.1 20 5.3 0.2 2.5 2 0 0 2 2 2 0 B domain AsnC_trans_reg PF01037.21 AID28475.1 - 5.6e-21 74.3 0.1 8.5e-21 73.7 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID28475.1 - 6.1e-19 67.3 0.1 9.4e-19 66.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID28475.1 - 4.1e-17 61.7 0.4 8.1e-17 60.8 0.4 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 AID28475.1 - 0.0019 18.2 0.0 0.0036 17.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 AID28475.1 - 0.0088 16.0 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Crp_2 PF13545.6 AID28475.1 - 0.019 14.9 0.0 0.045 13.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_CodY PF08222.11 AID28475.1 - 0.026 14.0 0.0 0.073 12.6 0.0 1.7 2 0 0 2 2 2 0 CodY helix-turn-helix domain MarR_2 PF12802.7 AID28475.1 - 0.066 13.1 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 AID28475.1 - 0.15 12.0 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Aminotran_1_2 PF00155.21 AID28476.1 - 1.4e-15 57.3 0.0 1.8e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID28476.1 - 9.8e-11 41.1 0.1 2.6e-10 39.8 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID28476.1 - 5.2e-05 23.2 0.2 0.00012 22.0 0.2 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID28476.1 - 0.00049 19.6 0.1 0.0011 18.5 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 AID28476.1 - 0.00064 19.6 0.0 0.0013 18.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28476.1 - 0.0089 15.9 0.1 0.026 14.4 0.1 1.8 1 0 0 1 1 1 1 MarR family CoA_binding_2 PF13380.6 AID28476.1 - 0.029 14.9 0.0 0.077 13.5 0.0 1.6 1 0 0 1 1 1 0 CoA binding domain ABC_tran PF00005.27 AID28477.1 - 5.2e-33 114.5 0.0 6.7e-33 114.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28477.1 - 1e-10 42.0 0.0 0.00011 22.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28477.1 - 1.7e-08 34.2 0.1 3.3e-07 30.0 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TniB PF05621.11 AID28477.1 - 4e-05 23.1 0.3 0.024 14.1 0.0 2.5 3 0 0 3 3 2 2 Bacterial TniB protein AAA_22 PF13401.6 AID28477.1 - 6.5e-05 23.2 0.4 0.00082 19.7 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID28477.1 - 0.00065 20.1 0.2 0.025 15.0 0.2 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID28477.1 - 0.00072 19.2 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 AID28477.1 - 0.00088 18.9 0.6 1.6 8.3 0.1 3.1 2 1 1 3 3 3 2 AAA domain AAA_16 PF13191.6 AID28477.1 - 0.0022 18.4 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 AID28477.1 - 0.0039 17.2 0.2 0.65 10.0 0.1 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 AID28477.1 - 0.0067 17.0 0.0 0.012 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 AID28477.1 - 0.016 15.4 0.3 0.28 11.4 0.3 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 AID28477.1 - 0.026 14.4 0.0 0.052 13.5 0.0 1.5 2 0 0 2 2 1 0 RsgA GTPase ATPase_2 PF01637.18 AID28477.1 - 0.035 14.0 0.1 0.49 10.3 0.1 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 AID28477.1 - 0.042 13.6 0.3 0.073 12.8 0.3 1.7 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID28477.1 - 0.045 13.7 0.0 0.086 12.8 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 AID28477.1 - 0.07 13.4 0.1 0.26 11.5 0.0 2.0 2 1 0 2 2 2 0 AAA domain Roc PF08477.13 AID28477.1 - 0.073 13.3 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 AID28477.1 - 0.078 13.1 0.0 7.1 6.8 0.0 2.2 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_33 PF13671.6 AID28477.1 - 0.079 13.1 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID28477.1 - 0.091 12.5 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID28477.1 - 0.099 13.1 0.0 0.17 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 AID28477.1 - 0.11 12.0 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_19 PF13245.6 AID28477.1 - 0.11 12.8 0.5 0.18 12.1 0.5 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID28477.1 - 0.15 11.6 0.1 1 8.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region NACHT PF05729.12 AID28477.1 - 0.16 11.9 0.1 0.36 10.7 0.1 1.6 1 0 0 1 1 1 0 NACHT domain cobW PF02492.19 AID28477.1 - 0.16 11.5 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_15 PF13175.6 AID28477.1 - 0.19 11.4 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain G-alpha PF00503.20 AID28477.1 - 0.23 10.6 0.0 0.35 10.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit SBP_bac_3 PF00497.20 AID28479.1 - 2e-41 141.9 0.0 2.3e-41 141.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 BPD_transp_1 PF00528.22 AID28480.1 - 5.2e-22 78.5 14.6 7.1e-22 78.0 14.6 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28481.1 - 4.2e-26 91.8 5.6 4.2e-26 91.8 5.6 1.8 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component Amdase PF17645.1 AID28482.1 - 1.4e-24 87.0 0.0 1.7e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 AID28482.1 - 1.5e-07 31.5 0.0 3.6e-07 30.3 0.0 1.6 1 1 0 1 1 1 1 Asp/Glu/Hydantoin racemase PALP PF00291.25 AID28483.1 - 1.7e-74 250.9 8.1 1.9e-74 250.7 8.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme OCD_Mu_crystall PF02423.15 AID28484.1 - 3.4e-102 341.7 4.7 3.8e-102 341.5 4.7 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 AID28484.1 - 0.0018 18.4 0.1 0.0034 17.4 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase CwsA PF10814.8 AID28484.1 - 0.015 15.4 2.0 0.015 15.4 2.0 2.0 2 1 0 2 2 2 0 Cell wall synthesis protein CwsA Peptidase_M24 PF00557.24 AID28485.1 - 1.4e-35 122.9 0.0 2.3e-35 122.2 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID28485.1 - 4.6e-23 82.3 0.0 7.1e-23 81.7 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Creatinase_N_2 PF16189.5 AID28485.1 - 0.00018 21.6 0.0 0.0009 19.4 0.0 1.9 1 1 0 1 1 1 1 Creatinase/Prolidase N-terminal domain AstE_AspA PF04952.14 AID28486.1 - 1.5e-84 283.5 0.0 1.7e-84 283.4 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Acyl_transf_3 PF01757.22 AID28487.1 - 1.7e-21 76.7 36.3 2e-21 76.4 36.3 1.1 1 0 0 1 1 1 1 Acyltransferase family GntR PF00392.21 AID28488.1 - 0.0094 15.6 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MaoC_dehydratas PF01575.19 AID28489.1 - 2.5e-22 78.7 0.0 3.3e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID28489.1 - 0.00018 21.6 0.1 0.00059 20.0 0.1 1.8 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase GFO_IDH_MocA PF01408.22 AID28490.1 - 7.6e-14 52.6 0.0 1.3e-13 51.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold rhaM PF05336.13 AID28491.1 - 1.3e-36 124.9 0.3 1.4e-36 124.8 0.3 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase MR_MLE_C PF13378.6 AID28492.1 - 4.1e-64 216.2 0.6 5.9e-64 215.7 0.2 1.5 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28492.1 - 5.3e-21 75.0 0.1 9.3e-21 74.2 0.1 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABC_tran PF00005.27 AID28493.1 - 3.4e-31 108.6 0.0 5.5e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID28493.1 - 5.4e-12 46.4 0.0 2.1e-11 44.5 0.0 2.1 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 AID28493.1 - 6e-09 36.1 0.0 0.00073 19.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CysA_C_terminal PF17850.1 AID28493.1 - 8.2e-07 29.5 0.1 5.5e-06 26.9 0.1 2.4 2 0 0 2 2 2 1 CysA C-terminal regulatory domain TOBE_2 PF08402.10 AID28493.1 - 2.2e-06 27.7 0.0 7.6e-05 22.8 0.0 2.5 1 1 1 2 2 2 2 TOBE domain SMC_N PF02463.19 AID28493.1 - 2.2e-06 27.3 0.1 5.5e-05 22.7 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID28493.1 - 0.00062 20.1 0.0 0.0011 19.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID28493.1 - 0.004 17.1 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_15 PF13175.6 AID28493.1 - 0.0069 16.1 0.0 0.52 10.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 AID28493.1 - 0.013 15.2 0.0 0.028 14.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID28493.1 - 0.015 15.2 0.0 0.032 14.1 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 AID28493.1 - 0.016 15.5 0.0 0.029 14.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID28493.1 - 0.016 15.6 0.1 0.028 14.8 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 AID28493.1 - 0.029 14.8 0.2 0.085 13.3 0.2 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID28493.1 - 0.089 13.3 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID28493.1 - 0.095 12.4 0.1 0.21 11.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID28493.1 - 0.13 12.8 0.0 0.23 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 AID28494.1 - 6.8e-23 81.4 10.4 6.8e-23 81.4 10.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ETRAMP PF09716.10 AID28494.1 - 0.25 11.4 2.7 0.25 11.4 0.5 2.1 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Glycoprotein PF03409.15 AID28496.1 - 0.15 10.9 0.2 0.21 10.4 0.2 1.2 1 0 0 1 1 1 0 Transmembrane glycoprotein IclR PF01614.18 AID28497.1 - 2.8e-16 59.5 0.0 6.6e-16 58.3 0.0 1.6 2 0 0 2 2 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 AID28497.1 - 2.4e-11 43.2 0.1 6.9e-11 41.8 0.0 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID28497.1 - 2.5e-08 33.4 0.0 5.9e-08 32.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID28497.1 - 2.4e-06 27.3 0.1 6.7e-06 25.9 0.1 1.7 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID28497.1 - 1.3e-05 25.0 0.0 3.6e-05 23.6 0.0 1.7 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 AID28497.1 - 7.1e-05 22.7 0.0 0.00014 21.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID28497.1 - 0.00037 20.5 0.1 0.0013 18.8 0.0 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain Dimerisation PF08100.11 AID28497.1 - 0.00057 19.8 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 Dimerisation domain HTH_27 PF13463.6 AID28497.1 - 0.0028 18.1 0.0 0.0077 16.7 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4612 PF15389.6 AID28497.1 - 0.0093 17.0 0.0 0.79 10.8 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4612) HTH_23 PF13384.6 AID28497.1 - 0.0099 15.7 0.0 0.023 14.5 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 AID28497.1 - 0.012 15.3 0.0 0.033 14.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1803 PF08820.10 AID28497.1 - 0.02 14.9 0.0 0.038 14.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) HTH_45 PF14947.6 AID28497.1 - 0.027 14.5 0.0 0.053 13.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Rrf2 PF02082.20 AID28497.1 - 0.033 14.5 0.3 0.12 12.7 0.0 2.1 3 0 0 3 3 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 AID28497.1 - 0.038 14.0 0.0 0.084 12.9 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain B-block_TFIIIC PF04182.12 AID28497.1 - 0.044 13.9 0.0 0.084 13.0 0.0 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_29 PF13551.6 AID28497.1 - 0.065 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix LexA_DNA_bind PF01726.16 AID28497.1 - 0.082 12.7 0.0 0.27 11.0 0.0 1.9 1 0 0 1 1 1 0 LexA DNA binding domain ComGG PF14173.6 AID28497.1 - 0.12 12.8 0.1 7.5 7.0 0.0 2.2 1 1 1 2 2 2 0 ComG operon protein 7 FeoC PF09012.10 AID28497.1 - 0.12 12.5 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_57 PF18679.1 AID28497.1 - 0.13 12.6 0.0 17 5.8 0.0 2.4 2 0 0 2 2 2 0 ThcOx helix turn helix domain Amidohydro_2 PF04909.14 AID28498.1 - 9.9e-46 156.8 1.7 1.1e-45 156.6 1.7 1.0 1 0 0 1 1 1 1 Amidohydrolase SBP_bac_8 PF13416.6 AID28499.1 - 3.1e-11 43.6 0.0 1.1e-10 41.8 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28499.1 - 5.1e-06 26.7 0.1 0.14 12.1 0.0 2.7 2 1 1 3 3 3 2 Bacterial extracellular solute-binding protein Ribosomal_L11_N PF03946.14 AID28499.1 - 0.2 11.5 0.0 0.43 10.5 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11, N-terminal domain CoA_transf_3 PF02515.17 AID28500.1 - 4.8e-113 378.0 0.0 5.4e-113 377.8 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III MaoC_dehydratas PF01575.19 AID28501.1 - 6e-11 42.0 0.0 8.6e-11 41.5 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain Tim44 PF04280.15 AID28503.1 - 5.1e-31 107.8 0.8 7.4e-31 107.2 0.8 1.2 1 0 0 1 1 1 1 Tim44-like domain SARAF PF06682.12 AID28503.1 - 0.013 15.1 0.5 0.46 10.1 0.1 2.2 2 0 0 2 2 2 0 SOCE-associated regulatory factor of calcium homoeostasis zf-TFIIB PF13453.6 AID28504.1 - 8.2e-17 60.3 0.3 1.1e-16 59.9 0.3 1.2 1 0 0 1 1 1 1 Transcription factor zinc-finger ADH_zinc_N_2 PF13602.6 AID28505.1 - 3.8e-19 70.0 0.0 1.2e-18 68.4 0.0 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 AID28505.1 - 2.6e-18 66.2 0.1 5.5e-18 65.2 0.1 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID28505.1 - 9.7e-09 35.1 0.0 4.3e-08 33.0 0.0 2.0 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 AID28505.1 - 0.025 14.5 0.0 0.055 13.4 0.0 1.5 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase TrkA_N PF02254.18 AID28505.1 - 0.079 13.2 1.8 0.14 12.4 1.8 1.3 1 0 0 1 1 1 0 TrkA-N domain LysR_substrate PF03466.20 AID28506.1 - 2e-41 141.6 9.5 2.7e-41 141.3 9.5 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28506.1 - 6.5e-16 58.0 0.2 1.8e-15 56.6 0.2 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TPP_enzyme_N PF02776.18 AID28507.1 - 1.1e-52 178.1 0.5 8.5e-52 175.2 0.2 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID28507.1 - 2.4e-38 131.3 0.1 4.5e-38 130.4 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 AID28507.1 - 6.2e-28 97.2 0.0 1.3e-27 96.2 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Peptidase_M55 PF04951.13 AID28507.1 - 0.2 11.1 0.7 0.48 9.8 0.0 2.0 3 0 0 3 3 3 0 D-aminopeptidase Peripla_BP_6 PF13458.6 AID28508.1 - 9.6e-80 268.8 0.9 1.2e-79 268.5 0.9 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID28508.1 - 4.2e-75 253.0 0.0 4.9e-75 252.8 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain TAT_signal PF10518.9 AID28508.1 - 2.6e-06 27.0 2.4 6.1e-06 25.9 2.4 1.7 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence ANF_receptor PF01094.28 AID28508.1 - 0.00075 18.7 0.0 0.0035 16.5 0.0 1.8 1 1 0 1 1 1 1 Receptor family ligand binding region Glyco_tran_WecB PF03808.13 AID28508.1 - 0.14 12.1 0.0 1.9 8.4 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family ABC_tran PF00005.27 AID28509.1 - 1.8e-28 99.8 0.0 2.4e-28 99.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28509.1 - 1.3e-09 38.3 1.6 0.0008 19.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 AID28509.1 - 0.002 17.9 0.2 0.0037 17.0 0.2 1.4 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 AID28509.1 - 0.0023 17.5 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 AID28509.1 - 0.0046 17.4 0.4 0.0085 16.5 0.3 1.5 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 AID28509.1 - 0.0063 15.4 0.7 0.32 9.8 0.0 2.2 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 AID28509.1 - 0.011 16.2 0.2 0.017 15.7 0.2 1.2 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 AID28509.1 - 0.023 14.3 0.8 0.034 13.8 0.8 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NACHT PF05729.12 AID28509.1 - 0.035 14.0 0.8 0.065 13.1 0.8 1.4 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 AID28509.1 - 0.036 14.1 0.2 0.063 13.3 0.2 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 AID28509.1 - 0.048 12.9 0.1 0.077 12.3 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_13 PF13166.6 AID28509.1 - 0.052 12.2 0.0 0.12 11.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 AID28509.1 - 0.082 12.7 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3584 PF12128.8 AID28509.1 - 0.11 10.0 0.2 0.15 9.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) RsgA_GTPase PF03193.16 AID28509.1 - 0.12 12.3 0.3 0.25 11.2 0.3 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 AID28509.1 - 0.18 12.0 0.1 0.25 11.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID28509.1 - 0.18 11.9 0.1 0.33 11.0 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase MobB PF03205.14 AID28509.1 - 0.2 11.6 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.27 AID28510.1 - 5.3e-25 88.5 0.0 6.7e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28510.1 - 7.4e-07 29.3 2.2 0.0026 17.6 0.8 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID28510.1 - 4.7e-05 24.0 0.2 6.8e-05 23.5 0.2 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28510.1 - 0.00058 19.6 0.1 0.0013 18.4 0.0 1.6 2 0 0 2 2 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID28510.1 - 0.00089 19.2 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 AID28510.1 - 0.0032 17.1 0.0 0.0051 16.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID28510.1 - 0.0036 17.1 0.0 0.0049 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 AID28510.1 - 0.0047 17.0 0.2 0.011 15.8 0.2 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_30 PF13604.6 AID28510.1 - 0.0095 15.7 0.0 0.03 14.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID28510.1 - 0.015 14.7 0.0 0.086 12.3 0.0 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID28510.1 - 0.017 15.4 0.1 0.039 14.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID28510.1 - 0.047 14.1 0.0 0.06 13.7 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 AID28510.1 - 0.086 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 AID28510.1 - 0.13 12.0 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 AID28510.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.5 2 0 0 2 2 2 0 Dynamin family IstB_IS21 PF01695.17 AID28510.1 - 0.2 11.4 0.1 0.52 10.0 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein BPD_transp_2 PF02653.16 AID28511.1 - 1.5e-32 112.9 37.1 2.3e-32 112.2 37.1 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28512.1 - 5.1e-44 150.4 43.3 6.3e-44 150.1 43.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component YbgT_YccB PF08173.11 AID28512.1 - 1.6 8.9 8.2 0.29 11.3 1.9 3.0 2 0 0 2 2 2 0 Membrane bound YbgT-like protein Hist_deacetyl PF00850.19 AID28513.1 - 2.7e-73 247.1 0.0 4.9e-73 246.3 0.0 1.4 1 1 0 1 1 1 1 Histone deacetylase domain TPR_MalT PF17874.1 AID28515.1 - 3.6e-35 121.9 14.2 3.6e-35 121.9 14.2 1.8 2 0 0 2 2 2 1 MalT-like TPR region GerE PF00196.19 AID28515.1 - 2.9e-19 68.3 0.3 8.9e-19 66.8 0.3 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family AAA_16 PF13191.6 AID28515.1 - 6.5e-06 26.6 0.2 6.5e-06 26.6 0.2 3.6 4 1 0 4 4 4 1 AAA ATPase domain Sigma70_r4_2 PF08281.12 AID28515.1 - 0.00034 20.2 0.0 0.0026 17.4 0.0 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.6 AID28515.1 - 0.0008 19.1 0.0 0.0027 17.4 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 AID28515.1 - 0.00089 18.8 0.3 0.0041 16.7 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AAA_25 PF13481.6 AID28515.1 - 0.014 14.9 0.8 0.037 13.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain TPR_19 PF14559.6 AID28515.1 - 0.048 14.2 0.1 0.048 14.2 0.1 5.8 6 1 0 6 6 6 0 Tetratricopeptide repeat HTH_23 PF13384.6 AID28515.1 - 0.089 12.6 0.0 0.089 12.6 0.0 3.4 4 0 0 4 4 4 0 Homeodomain-like domain TPR_12 PF13424.6 AID28515.1 - 1.1 9.6 29.9 0.61 10.4 1.9 5.4 3 1 2 5 5 5 0 Tetratricopeptide repeat Acetyltransf_1 PF00583.25 AID28516.1 - 1.5e-09 38.1 0.1 2e-09 37.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID28516.1 - 8.1e-07 29.0 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID28516.1 - 5.5e-06 26.7 0.0 8.3e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID28516.1 - 4.7e-05 23.4 0.0 8.1e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 AID28516.1 - 0.016 15.9 0.0 0.021 15.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Peptidase_M20 PF01546.28 AID28517.1 - 3.6e-34 118.3 0.0 4.9e-34 117.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID28517.1 - 8.2e-20 70.8 0.0 1.4e-19 70.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 AID28517.1 - 0.00039 20.2 0.0 0.0011 18.7 0.0 1.7 2 0 0 2 2 2 1 Peptidase family M28 APH PF01636.23 AID28518.1 - 6.5e-31 108.1 1.6 9e-31 107.6 0.3 1.7 1 1 0 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 AID28518.1 - 0.065 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 RIO1 family Aminotran_3 PF00202.21 AID28519.1 - 1.8e-71 241.0 0.0 2.2e-71 240.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 AID28519.1 - 0.00015 21.1 0.0 0.00033 19.9 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II FCD PF07729.12 AID28520.1 - 7.5e-25 87.8 0.8 7.5e-25 87.8 0.8 1.5 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID28520.1 - 3.9e-18 64.8 0.6 9.6e-18 63.6 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID28520.1 - 0.013 15.1 0.1 0.035 13.7 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID28520.1 - 0.026 14.4 0.9 2.7 7.9 0.0 3.2 3 0 0 3 3 3 0 MarR family PaaX PF07848.12 AID28520.1 - 0.048 13.9 0.4 0.19 11.9 0.1 2.2 2 1 0 2 2 2 0 PaaX-like protein HTH_DeoR PF08220.12 AID28520.1 - 0.075 12.8 0.0 0.23 11.2 0.0 1.8 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain DAO PF01266.24 AID28521.1 - 5.2e-49 167.7 4.3 6.1e-49 167.5 4.3 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID28521.1 - 7.8e-07 28.5 7.1 3e-05 23.3 7.1 2.4 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 AID28521.1 - 9e-07 28.4 0.8 0.038 13.3 2.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28521.1 - 4e-05 23.8 1.0 0.00024 21.3 0.4 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID28521.1 - 4.7e-05 22.8 0.1 6.4e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28521.1 - 0.0002 20.2 0.1 0.0034 16.1 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 AID28521.1 - 0.0005 19.4 0.1 0.00099 18.4 0.1 1.4 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 AID28521.1 - 0.002 17.5 0.8 0.0029 17.0 0.8 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 AID28521.1 - 0.0034 16.5 0.5 0.0051 15.9 0.5 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 AID28521.1 - 0.0051 16.1 0.6 0.0089 15.3 0.6 1.3 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 AID28521.1 - 0.022 13.9 2.1 0.031 13.4 2.1 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 AID28521.1 - 0.027 13.8 0.3 4.1 6.6 0.6 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase BPD_transp_2 PF02653.16 AID28522.1 - 9.2e-47 159.4 37.1 1.1e-46 159.2 37.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28523.1 - 3.4e-37 128.1 46.0 4e-37 127.9 46.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28524.1 - 3e-30 105.5 0.0 4.2e-30 105.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28524.1 - 9e-12 45.4 0.4 5.3e-05 23.2 0.3 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28524.1 - 2.3e-06 27.2 0.4 0.0041 16.6 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28524.1 - 0.0011 18.7 0.2 0.002 17.8 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28524.1 - 0.0025 18.3 0.1 0.0037 17.8 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 AID28524.1 - 0.0041 16.7 0.0 0.0073 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28524.1 - 0.011 15.5 0.3 0.021 14.5 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID28524.1 - 0.015 15.0 0.0 0.05 13.3 0.1 1.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_16 PF13191.6 AID28524.1 - 0.02 15.3 0.1 0.035 14.5 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 AID28524.1 - 0.021 14.6 0.2 0.67 9.7 0.1 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein RsgA_GTPase PF03193.16 AID28524.1 - 0.024 14.6 0.2 0.043 13.7 0.2 1.3 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 AID28524.1 - 0.063 13.5 0.1 1.9 8.8 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 AID28524.1 - 0.094 12.8 0.1 0.2 11.8 0.1 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Dynamin_N PF00350.23 AID28524.1 - 0.12 12.4 0.5 0.2 11.7 0.5 1.3 1 0 0 1 1 1 0 Dynamin family AAA_22 PF13401.6 AID28524.1 - 0.16 12.3 0.5 3.7 7.8 0.3 2.1 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID28525.1 - 1.9e-28 99.7 0.0 2.7e-28 99.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID28525.1 - 8.3e-10 38.4 0.1 1.6e-09 37.4 0.1 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 AID28525.1 - 1.1e-08 35.2 3.6 0.0004 20.3 0.2 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28525.1 - 0.00021 20.8 0.2 0.3 10.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28525.1 - 0.00075 19.2 0.2 0.0015 18.2 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28525.1 - 0.0044 17.5 0.1 0.0066 17.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28525.1 - 0.014 15.8 0.1 0.023 15.1 0.1 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 AID28525.1 - 0.028 14.8 0.2 0.92 9.9 0.1 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 AID28525.1 - 0.066 12.4 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA_22 PF13401.6 AID28525.1 - 0.15 12.3 1.5 4.4 7.6 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID28525.1 - 0.27 10.9 0.1 2.6 7.7 0.1 1.9 2 0 0 2 2 2 0 AAA ATPase domain FCD PF07729.12 AID28526.1 - 1.2e-22 80.7 4.6 2.4e-22 79.7 4.6 1.5 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28526.1 - 5.4e-14 51.6 0.4 1.5e-13 50.2 0.4 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family DUF3830 PF12903.7 AID28527.1 - 1.2e-43 148.3 0.0 1.3e-43 148.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3830) Aldo_ket_red PF00248.21 AID28529.1 - 3.8e-59 200.3 0.0 4.4e-59 200.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF4440 PF14534.6 AID28530.1 - 4.1e-05 23.9 0.2 5.1e-05 23.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 AID28530.1 - 0.0063 17.1 0.4 0.008 16.8 0.4 1.2 1 0 0 1 1 1 1 SnoaL-like domain Peripla_BP_6 PF13458.6 AID28531.1 - 2.9e-44 152.1 10.4 3.8e-44 151.7 10.4 1.2 1 1 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID28531.1 - 1.4e-20 73.7 0.0 2e-20 73.2 0.0 1.3 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 AID28531.1 - 5.9e-11 42.0 1.5 7.1e-09 35.1 0.3 2.6 2 1 0 2 2 2 2 Periplasmic binding protein domain LppC PF04348.13 AID28531.1 - 0.0006 18.7 0.0 0.00093 18.1 0.0 1.2 1 0 0 1 1 1 1 LppC putative lipoprotein FAD-oxidase_C PF02913.19 AID28532.1 - 7.5e-51 173.2 0.0 9.8e-51 172.8 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 AID28532.1 - 9e-31 106.5 6.7 2.1e-30 105.3 6.7 1.6 1 0 0 1 1 1 1 FAD binding domain BPD_transp_1 PF00528.22 AID28533.1 - 1.9e-19 70.1 20.2 1.9e-19 70.1 20.2 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28534.1 - 2.1e-07 30.8 45.1 2.8e-05 23.9 45.1 2.6 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID28535.1 - 2e-33 115.8 0.0 3.4e-33 115.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28535.1 - 7.1e-13 48.5 0.2 1.6e-12 47.4 0.1 1.7 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 AID28535.1 - 8.1e-08 32.4 1.9 0.002 18.0 0.2 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28535.1 - 9.3e-06 25.2 0.0 0.0021 17.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID28535.1 - 0.00014 22.2 1.4 0.00099 19.4 1.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28535.1 - 0.0071 16.7 2.6 0.038 14.4 2.6 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID28535.1 - 0.025 14.3 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TOBE PF03459.17 AID28535.1 - 0.043 14.1 0.1 0.33 11.3 0.0 2.4 2 1 0 2 2 2 0 TOBE domain SbcCD_C PF13558.6 AID28535.1 - 0.084 13.1 0.3 0.38 11.0 0.3 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 AID28535.1 - 0.16 12.1 0.4 0.43 10.7 0.1 2.0 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID28535.1 - 0.17 11.8 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 AID28535.1 - 0.21 12.2 0.0 0.89 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 AID28535.1 - 0.24 11.1 0.7 2.6 7.7 0.1 2.1 2 0 0 2 2 2 0 AAA domain SBP_bac_8 PF13416.6 AID28536.1 - 4.5e-37 128.4 8.3 5.7e-37 128.1 8.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28536.1 - 1.5e-26 93.3 2.0 2.1e-26 92.8 2.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28536.1 - 3.7e-16 60.0 12.4 5.4e-16 59.4 12.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein adh_short_C2 PF13561.6 AID28538.1 - 5.9e-55 186.4 0.0 7.1e-55 186.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28538.1 - 2.1e-47 161.1 0.0 2.6e-47 160.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28538.1 - 2.3e-06 27.6 0.0 3.6e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28538.1 - 0.018 14.5 0.0 0.046 13.2 0.0 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID28538.1 - 0.048 12.7 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_7 PF13241.6 AID28538.1 - 0.098 13.1 0.0 0.25 11.8 0.0 1.7 2 0 0 2 2 2 0 Putative NAD(P)-binding Polysacc_synt_2 PF02719.15 AID28538.1 - 0.2 10.7 0.0 0.27 10.3 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ILVD_EDD PF00920.21 AID28539.1 - 1.7e-182 607.7 0.0 1.9e-182 607.5 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family FCD PF07729.12 AID28540.1 - 1.8e-25 89.8 5.2 2.8e-25 89.1 5.2 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28540.1 - 1e-14 53.9 0.3 3e-14 52.4 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 AID28540.1 - 0.0022 17.8 0.9 0.74 9.7 0.0 2.5 2 0 0 2 2 2 2 MarR family TrmB PF01978.19 AID28540.1 - 0.0055 16.6 0.0 0.014 15.3 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 AID28540.1 - 0.022 14.7 0.1 0.054 13.4 0.1 1.6 1 0 0 1 1 1 0 HTH domain MerR-DNA-bind PF09278.11 AID28540.1 - 0.045 14.3 0.4 0.11 13.0 0.4 1.7 1 0 0 1 1 1 0 MerR, DNA binding Aldose_epim PF01263.20 AID28541.1 - 3e-46 158.1 0.0 3.3e-46 158.0 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF5324 PF17258.2 AID28541.1 - 0.033 13.9 0.4 0.054 13.2 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5324) Aldedh PF00171.22 AID28542.1 - 3.2e-152 507.2 5.1 4e-152 506.9 5.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family adh_short_C2 PF13561.6 AID28543.1 - 1.1e-33 116.7 2.2 4.7e-19 68.9 0.0 2.2 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28543.1 - 7.3e-20 71.3 2.1 3.7e-14 52.6 3.4 2.4 1 1 1 2 2 2 2 short chain dehydrogenase Epimerase PF01370.21 AID28543.1 - 4.7e-07 29.5 0.1 1e-06 28.4 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 AID28543.1 - 0.0028 17.7 1.9 0.0053 16.7 1.9 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 AID28543.1 - 0.021 14.2 0.1 0.034 13.5 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BPD_transp_2 PF02653.16 AID28544.1 - 3.4e-23 82.1 42.3 3.4e-23 82.1 42.3 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID28545.1 - 2.3e-29 102.4 31.6 2.8e-29 102.1 31.6 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28546.1 - 8.5e-31 107.3 0.0 1.2e-30 106.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28546.1 - 4.8e-10 39.7 0.7 2.9e-05 24.0 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 AID28546.1 - 0.00019 20.4 0.6 0.25 10.1 0.2 2.7 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 AID28546.1 - 0.00037 20.2 0.0 0.00081 19.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28546.1 - 0.00041 20.9 0.0 0.0006 20.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28546.1 - 0.00047 20.6 0.3 0.00082 19.8 0.3 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID28546.1 - 0.00065 19.5 0.2 0.0022 17.7 0.2 1.8 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 AID28546.1 - 0.0025 17.1 0.0 0.0041 16.4 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 AID28546.1 - 0.0093 16.2 0.1 0.043 14.1 0.1 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID28546.1 - 0.0099 15.8 0.0 0.017 15.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 AID28546.1 - 0.011 15.7 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 AID28546.1 - 0.013 15.9 0.0 0.05 14.0 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 AID28546.1 - 0.014 15.1 0.1 0.048 13.4 0.1 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein TsaE PF02367.17 AID28546.1 - 0.015 15.3 0.2 0.038 14.0 0.1 1.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 AID28546.1 - 0.017 15.4 0.1 0.028 14.7 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID28546.1 - 0.018 14.7 0.0 0.025 14.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 AID28546.1 - 0.019 14.6 0.1 0.037 13.7 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_25 PF13481.6 AID28546.1 - 0.022 14.4 0.7 0.037 13.6 0.7 1.5 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 AID28546.1 - 0.031 13.7 0.1 0.23 10.9 0.0 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF3584 PF12128.8 AID28546.1 - 0.032 11.8 0.1 0.04 11.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_33 PF13671.6 AID28546.1 - 0.036 14.2 0.1 0.1 12.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID28546.1 - 0.04 14.0 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase cobW PF02492.19 AID28546.1 - 0.056 13.0 0.2 0.12 12.0 0.1 1.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_27 PF13514.6 AID28546.1 - 0.083 12.5 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID28546.1 - 0.087 12.2 0.7 1.3 8.3 0.2 2.1 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 AID28546.1 - 0.11 11.6 0.0 0.46 9.6 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain FeoB_N PF02421.18 AID28546.1 - 0.13 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Ferrous iron transport protein B ATP-synt_ab PF00006.25 AID28546.1 - 0.15 11.7 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_14 PF13173.6 AID28546.1 - 0.19 11.8 0.0 1.4 9.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 AID28546.1 - 0.24 10.0 0.0 0.38 9.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 AID28547.1 - 8.8e-22 78.1 0.0 1.4e-21 77.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID28547.1 - 6.8e-09 35.5 0.3 1.4e-08 34.5 0.3 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 AID28547.1 - 5.4e-05 23.1 0.4 0.00016 21.6 0.1 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID28547.1 - 0.001 19.6 0.1 0.0016 19.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28547.1 - 0.0025 17.6 0.5 0.0081 15.9 0.5 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28547.1 - 0.0062 16.9 0.2 0.013 15.9 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID28547.1 - 0.0099 15.6 0.0 0.02 14.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 AID28547.1 - 0.034 14.6 0.2 1.7 9.0 0.1 2.5 2 1 1 3 3 3 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID28547.1 - 0.048 13.1 0.0 0.41 10.0 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 AID28547.1 - 0.059 13.1 0.1 3.3 7.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.6 AID28547.1 - 0.066 13.5 0.2 0.54 10.5 0.2 2.2 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID28547.1 - 0.066 12.6 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF3584 PF12128.8 AID28547.1 - 0.07 10.6 0.0 0.094 10.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) MMR_HSR1 PF01926.23 AID28547.1 - 0.072 13.2 0.2 0.09 12.9 0.2 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID28547.1 - 0.08 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_27 PF13514.6 AID28547.1 - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID28547.1 - 0.13 11.8 0.3 0.26 10.9 0.3 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 AID28547.1 - 0.26 10.4 0.1 1.5 7.9 0.0 1.9 2 0 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 AID28547.1 - 0.27 10.9 0.0 0.42 10.3 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 AID28547.1 - 0.33 10.5 3.7 1.3 8.6 0.4 2.8 2 2 1 3 3 3 0 AAA domain Peripla_BP_6 PF13458.6 AID28548.1 - 1e-43 150.4 6.6 1.3e-43 150.0 6.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.9 AID28548.1 - 0.00015 21.5 3.9 0.00042 20.0 3.9 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence TehB PF03848.14 AID28548.1 - 0.0005 19.5 0.0 0.00082 18.8 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB ANF_receptor PF01094.28 AID28548.1 - 0.00071 18.8 0.0 0.0026 16.9 0.0 1.8 2 0 0 2 2 2 1 Receptor family ligand binding region LysR_substrate PF03466.20 AID28549.1 - 1.3e-27 96.5 0.2 2.1e-27 95.9 0.2 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28549.1 - 1.6e-18 66.4 1.3 3.3e-18 65.4 1.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID28549.1 - 0.0023 17.8 0.7 0.0059 16.5 0.7 1.7 1 0 0 1 1 1 1 MarR family HTH_30 PF13556.6 AID28549.1 - 0.0058 16.4 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 AID28549.1 - 0.011 15.6 0.1 0.022 14.5 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Fe_dep_repress PF01325.19 AID28549.1 - 0.049 13.8 0.0 0.087 13.0 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 AID28549.1 - 0.11 12.4 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 MarR family Abhydrolase_1 PF00561.20 AID28550.1 - 7.8e-19 68.3 0.0 5.4e-11 42.6 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID28550.1 - 1.9e-16 60.1 0.0 3.1e-16 59.4 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID28550.1 - 1.9e-15 58.1 0.1 2.2e-15 57.9 0.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 AID28550.1 - 6.8e-07 28.3 0.0 1.1e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Ndr family Abhydrolase_4 PF08386.10 AID28550.1 - 0.0017 18.5 0.0 0.059 13.5 0.0 2.2 2 0 0 2 2 2 1 TAP-like protein FSH1 PF03959.13 AID28550.1 - 0.2 11.3 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase (FSH1) CMD PF02627.20 AID28551.1 - 2.5e-22 78.7 1.3 4.1e-22 78.0 1.3 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Couple_hipA PF13657.6 AID28551.1 - 0.13 12.9 0.0 0.17 12.5 0.0 1.2 1 0 0 1 1 1 0 HipA N-terminal domain Dioxygenase_C PF00775.21 AID28552.1 - 6.7e-52 175.6 0.0 8e-52 175.3 0.0 1.1 1 0 0 1 1 1 1 Dioxygenase PCDO_beta_N PF12391.8 AID28552.1 - 1.5e-17 62.9 0.3 2.8e-17 62.0 0.3 1.5 1 0 0 1 1 1 1 Protocatechuate 3,4-dioxygenase beta subunit N terminal CarboxypepD_reg PF13620.6 AID28552.1 - 0.0004 20.6 0.4 0.0015 18.7 0.4 1.9 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain Dioxygenase_C PF00775.21 AID28553.1 - 3.7e-15 55.8 0.0 1.5e-14 53.9 0.0 1.8 1 1 0 1 1 1 1 Dioxygenase DUF824 PF05688.11 AID28553.1 - 0.07 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Lyase_1 PF00206.20 AID28554.1 - 1.8e-33 116.3 0.0 2.8e-33 115.6 0.0 1.2 1 0 0 1 1 1 1 Lyase ROK PF00480.20 AID28554.1 - 0.029 13.9 0.1 0.045 13.2 0.1 1.2 1 0 0 1 1 1 0 ROK family FAD_binding_3 PF01494.19 AID28555.1 - 1.6e-92 310.5 0.0 1.8e-92 310.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID28555.1 - 0.015 14.5 0.9 0.031 13.5 0.9 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID28555.1 - 0.027 14.7 1.5 0.057 13.6 0.5 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID28555.1 - 0.043 14.4 0.9 0.12 12.9 0.9 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID28555.1 - 0.054 12.7 0.2 0.09 12.0 0.2 1.4 1 0 0 1 1 1 0 Thi4 family BPD_transp_1 PF00528.22 AID28556.1 - 1.7e-17 63.7 19.6 1.7e-17 63.7 19.6 2.0 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component Macro_2 PF14519.6 AID28556.1 - 0.00088 18.7 0.5 0.0014 18.0 0.5 1.2 1 0 0 1 1 1 1 Macro-like domain BPD_transp_1 PF00528.22 AID28557.1 - 3.9e-15 56.1 13.1 3.9e-15 56.1 13.1 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 AID28558.1 - 7.4e-35 121.1 8.3 1.1e-34 120.6 8.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28558.1 - 3.3e-33 116.0 16.9 4.7e-33 115.5 16.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28559.1 - 1.2e-42 147.0 10.5 1.8e-42 146.4 10.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID28559.1 - 1.2e-38 133.5 4.0 1.6e-38 133.2 4.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28559.1 - 6.3e-06 25.8 0.1 0.01 15.3 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID28559.1 - 0.00076 19.3 0.2 0.088 12.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID28560.1 - 5.9e-14 52.2 16.5 5.9e-14 52.2 16.5 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Rax2 PF12768.7 AID28560.1 - 0.12 11.8 0.8 0.23 10.9 0.8 1.4 1 0 0 1 1 1 0 Cortical protein marker for cell polarity BPD_transp_1 PF00528.22 AID28561.1 - 2.2e-12 47.1 18.4 2.2e-12 47.1 18.4 2.4 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component PIG-L PF02585.17 AID28562.1 - 4.8e-18 66.1 0.3 6.9e-18 65.5 0.3 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase ROK PF00480.20 AID28563.1 - 1.8e-34 119.5 0.1 2.2e-34 119.3 0.1 1.0 1 0 0 1 1 1 1 ROK family Hexokinase_1 PF00349.21 AID28563.1 - 0.2 11.5 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Hexokinase UTRA PF07702.13 AID28564.1 - 6.3e-35 120.1 0.0 1.2e-34 119.2 0.0 1.5 2 0 0 2 2 2 1 UTRA domain GntR PF00392.21 AID28564.1 - 5.7e-20 70.7 0.0 1.3e-19 69.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 AID28564.1 - 8.4e-07 28.7 0.3 2e-06 27.4 0.3 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_20 PF12840.7 AID28564.1 - 0.0016 18.4 0.5 0.0042 17.1 0.5 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 AID28564.1 - 0.006 16.7 0.2 0.015 15.4 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 AID28564.1 - 0.017 15.1 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 AID28564.1 - 0.024 14.5 0.2 0.059 13.3 0.2 1.6 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 AID28564.1 - 0.027 14.4 0.1 0.061 13.3 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 AID28564.1 - 0.04 13.8 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 AID28564.1 - 0.051 14.1 0.0 0.12 12.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain PaaX PF07848.12 AID28564.1 - 0.061 13.6 0.1 0.16 12.2 0.1 1.7 1 0 0 1 1 1 0 PaaX-like protein SIS_2 PF13580.6 AID28565.1 - 1.3e-38 132.2 0.0 3.2e-38 130.9 0.0 1.6 2 0 0 2 2 2 1 SIS domain DUF2529 PF10740.9 AID28565.1 - 2.9e-06 27.0 0.0 0.0016 18.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF2529) SIS PF01380.22 AID28565.1 - 0.00026 20.9 0.0 0.00084 19.2 0.0 1.9 1 1 0 1 1 1 1 SIS domain Tagatose_6_P_K PF08013.11 AID28566.1 - 3.1e-183 609.2 0.0 3.5e-183 609.1 0.0 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase PfkB PF00294.24 AID28567.1 - 1.6e-43 149.2 0.0 1.9e-43 148.9 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID28567.1 - 0.0037 16.7 0.0 0.0064 15.9 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Peripla_BP_3 PF13377.6 AID28568.1 - 1.4e-17 64.5 0.1 2.5e-17 63.7 0.1 1.3 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID28568.1 - 1.1e-13 51.3 0.0 1.5e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID28568.1 - 5.3e-11 42.1 0.0 1e-10 41.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID28568.1 - 1.2e-07 31.6 0.0 1.6e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_3 PF01381.22 AID28568.1 - 0.0075 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix TetR_N PF00440.23 AID28568.1 - 0.015 15.1 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_31 PF13560.6 AID28568.1 - 0.11 12.9 0.0 0.26 11.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 AID28568.1 - 0.15 12.5 0.0 0.27 11.7 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Abhydrolase_3 PF07859.13 AID28569.1 - 1e-71 241.2 0.1 1.3e-71 240.8 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 AID28569.1 - 1.2e-10 40.9 0.1 2.8e-10 39.7 0.1 1.5 1 1 0 1 1 1 1 Carboxylesterase family Say1_Mug180 PF10340.9 AID28569.1 - 0.00015 20.7 0.0 0.0002 20.3 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Esterase_phd PF10503.9 AID28569.1 - 0.0019 17.7 0.3 0.0037 16.8 0.3 1.6 1 1 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 AID28569.1 - 0.003 17.1 0.0 0.0087 15.6 0.0 1.9 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 AID28569.1 - 0.0045 16.6 0.0 4.5 6.7 0.0 3.0 1 1 1 2 2 2 2 Dienelactone hydrolase family AXE1 PF05448.12 AID28569.1 - 0.085 11.5 0.1 0.12 11.0 0.1 1.2 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) CCDC73 PF15818.5 AID28569.1 - 0.11 10.3 0.0 0.15 9.9 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family GFO_IDH_MocA PF01408.22 AID28570.1 - 2.3e-17 63.9 0.0 3.4e-17 63.4 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 AID28570.1 - 0.0005 20.7 0.0 0.00091 19.9 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DeoRC PF00455.22 AID28571.1 - 1.7e-43 148.3 0.4 1.7e-43 148.3 0.4 1.4 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID28571.1 - 2e-15 56.3 0.9 3.4e-15 55.5 0.9 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID28571.1 - 9.6e-06 25.5 0.2 1.8e-05 24.6 0.2 1.4 1 0 0 1 1 1 1 HTH domain FeoC PF09012.10 AID28571.1 - 0.00049 20.1 0.0 0.00095 19.2 0.0 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator GntR PF00392.21 AID28571.1 - 0.00096 18.8 0.2 0.0018 17.9 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family PaaX PF07848.12 AID28571.1 - 0.0024 18.0 2.9 0.01 16.0 0.1 2.9 3 0 0 3 3 3 1 PaaX-like protein FaeA PF04703.12 AID28571.1 - 0.0031 17.9 0.0 0.0098 16.2 0.0 1.8 2 0 0 2 2 2 1 FaeA-like protein Rrf2 PF02082.20 AID28571.1 - 0.013 15.8 0.0 0.03 14.7 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator DUF4423 PF14394.6 AID28571.1 - 0.019 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_23 PF13384.6 AID28571.1 - 0.021 14.6 0.1 0.087 12.6 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain DUF977 PF06163.11 AID28571.1 - 0.048 13.6 0.1 0.088 12.8 0.1 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) DUF1957 PF09210.11 AID28571.1 - 0.12 12.8 0.3 0.46 10.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1957) DeoC PF01791.9 AID28572.1 - 1.4e-25 90.3 0.0 1.7e-25 90.0 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PfkB PF00294.24 AID28573.1 - 2.4e-28 99.3 0.0 5.7e-28 98.1 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DUF1887 PF09002.11 AID28573.1 - 0.12 11.0 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) ABC_tran PF00005.27 AID28574.1 - 1e-30 107.1 0.0 1.6e-30 106.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID28574.1 - 7.9e-14 52.2 0.0 3.2e-13 50.3 0.0 2.2 1 0 0 1 1 1 1 MalK OB fold domain CysA_C_terminal PF17850.1 AID28574.1 - 2.1e-06 28.2 0.1 7.4e-05 23.2 0.0 2.7 2 0 0 2 2 2 1 CysA C-terminal regulatory domain TOBE_2 PF08402.10 AID28574.1 - 3.3e-05 24.0 0.2 0.0028 17.8 0.1 3.1 2 1 0 2 2 2 1 TOBE domain SMC_N PF02463.19 AID28574.1 - 5.4e-05 22.7 0.1 0.0009 18.7 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID28574.1 - 0.0002 21.3 0.0 0.021 14.6 0.0 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 AID28574.1 - 0.00027 20.9 0.0 0.0005 20.0 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_15 PF13175.6 AID28574.1 - 0.00031 20.6 0.0 0.00044 20.1 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain TOBE PF03459.17 AID28574.1 - 0.001 19.3 0.1 0.062 13.6 0.1 2.8 2 0 0 2 2 2 1 TOBE domain RsgA_GTPase PF03193.16 AID28574.1 - 0.0019 18.1 0.0 0.0041 17.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID28574.1 - 0.0034 17.7 0.0 0.0061 16.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID28574.1 - 0.0052 17.3 0.0 0.0099 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28574.1 - 0.0066 16.8 0.0 0.015 15.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID28574.1 - 0.019 14.7 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 AID28574.1 - 0.024 15.0 0.1 0.051 14.0 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 AID28574.1 - 0.026 14.1 0.0 0.25 10.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 AID28574.1 - 0.093 12.4 0.0 0.28 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID28574.1 - 0.095 12.9 0.6 0.33 11.1 0.6 2.0 1 1 0 1 1 1 0 AAA domain SBP_bac_8 PF13416.6 AID28575.1 - 8.2e-32 111.1 8.1 8.2e-32 111.1 8.1 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28575.1 - 3.9e-31 109.2 4.6 7.2e-31 108.3 4.6 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID28575.1 - 2.1e-05 24.4 0.0 0.002 17.9 0.1 2.4 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28575.1 - 0.026 14.0 2.8 0.039 13.3 0.1 2.2 2 1 0 2 2 2 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID28576.1 - 1.6e-13 50.8 18.7 1.6e-13 50.8 18.7 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28577.1 - 6.5e-20 71.6 18.3 6.5e-20 71.6 18.3 1.8 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component AP_endonuc_2 PF01261.24 AID28578.1 - 3.3e-30 105.1 0.1 4.6e-30 104.6 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel SnoaL_2 PF12680.7 AID28578.1 - 0.0015 19.1 0.2 0.0037 17.9 0.2 1.6 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 AID28578.1 - 0.0021 18.3 0.0 0.0039 17.4 0.0 1.4 1 0 0 1 1 1 1 SnoaL-like domain UxuA PF03786.13 AID28578.1 - 0.089 11.6 0.0 0.13 11.0 0.0 1.2 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) GFO_IDH_MocA PF01408.22 AID28579.1 - 2.5e-23 83.2 0.1 4e-23 82.5 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 AID28579.1 - 0.00018 22.1 0.1 0.00032 21.3 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 AID28579.1 - 0.085 12.3 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus AP_endonuc_2 PF01261.24 AID28580.1 - 1.7e-27 96.2 0.1 2.2e-27 95.9 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Abhydrolase_1 PF00561.20 AID28581.1 - 3.1e-17 63.1 0.0 1.4e-16 60.9 0.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID28581.1 - 2.6e-09 36.7 0.1 3.9e-09 36.1 0.1 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID28581.1 - 1.6e-07 32.2 7.7 2e-07 31.8 7.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 AID28581.1 - 8.2e-07 28.0 0.0 1.4e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Ndr family Abhydrolase_5 PF12695.7 AID28581.1 - 0.0034 17.2 0.0 0.0099 15.7 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase family Esterase PF00756.20 AID28581.1 - 0.023 14.4 0.2 0.075 12.7 0.1 1.7 2 0 0 2 2 2 0 Putative esterase Abhydrolase_2 PF02230.16 AID28581.1 - 0.17 11.7 0.0 4.1 7.1 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Ribul_P_3_epim PF00834.19 AID28582.1 - 1.1e-39 135.9 0.0 1.3e-39 135.7 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family IMPDH PF00478.25 AID28582.1 - 5.6e-05 22.3 0.4 0.0084 15.1 0.2 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 AID28582.1 - 0.014 14.9 0.2 0.083 12.3 0.0 2.0 2 0 0 2 2 2 0 Histidine biosynthesis protein ROK PF00480.20 AID28583.1 - 2.2e-72 244.1 0.4 2.6e-72 243.8 0.4 1.0 1 0 0 1 1 1 1 ROK family FGGY_N PF00370.21 AID28583.1 - 0.0027 17.3 0.0 0.004 16.8 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain Raco_middle PF17651.1 AID28583.1 - 0.14 11.8 0.1 0.26 11.0 0.1 1.4 1 0 0 1 1 1 0 RACo middle region SDF PF00375.18 AID28584.1 - 1.3e-107 360.2 40.4 1.5e-107 360.0 40.4 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family HATPase_c PF02518.26 AID28585.1 - 3.3e-19 69.5 0.0 7.5e-19 68.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase dCache_1 PF02743.18 AID28585.1 - 5.9e-12 45.9 0.0 9.2e-11 42.0 0.0 2.2 2 0 0 2 2 2 1 Cache domain HisKA PF00512.25 AID28585.1 - 3.4e-11 43.0 0.2 1.5e-10 40.9 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 AID28585.1 - 2.5e-05 24.1 0.0 4.2e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 AID28585.1 - 0.0017 18.2 0.0 0.0033 17.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID28585.1 - 0.0082 16.1 0.0 0.022 14.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain sCache_3_2 PF17203.4 AID28585.1 - 0.075 13.2 1.4 1.5 9.0 0.0 2.8 2 1 1 3 3 3 0 Single cache domain 3 mRNA_cap_C PF03919.15 AID28585.1 - 0.093 13.4 0.0 0.17 12.6 0.0 1.3 1 0 0 1 1 1 0 mRNA capping enzyme, C-terminal domain Bac_export_3 PF01313.19 AID28585.1 - 0.11 12.4 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Bacterial export proteins, family 3 Wzz PF02706.15 AID28585.1 - 0.17 12.2 0.4 0.47 10.8 0.4 1.7 1 0 0 1 1 1 0 Chain length determinant protein DUF4381 PF14316.6 AID28585.1 - 0.3 11.3 7.0 0.12 12.7 1.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Sigma54_activat PF00158.26 AID28586.1 - 3.9e-65 218.6 0.0 5.6e-65 218.1 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Response_reg PF00072.24 AID28586.1 - 2e-26 92.3 0.2 4.3e-26 91.3 0.2 1.6 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 AID28586.1 - 8e-23 81.1 0.0 1.7e-22 80.0 0.0 1.6 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 AID28586.1 - 5.4e-07 29.7 0.0 1.2e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_8 PF02954.19 AID28586.1 - 6.4e-07 29.1 0.0 2.1e-06 27.4 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_50 PF18024.1 AID28586.1 - 8.3e-06 25.3 0.0 1.5e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain FleQ PF06490.11 AID28586.1 - 0.00011 22.5 0.0 0.00021 21.6 0.0 1.5 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ AAA_2 PF07724.14 AID28586.1 - 0.0031 17.6 0.0 0.0048 17.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) HOIP-UBA PF16678.5 AID28586.1 - 0.072 13.1 0.0 0.19 11.7 0.0 1.7 1 0 0 1 1 1 0 HOIP UBA domain pair AAA PF00004.29 AID28586.1 - 0.092 13.2 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID28586.1 - 0.14 12.6 1.0 0.31 11.4 0.1 2.3 2 0 0 2 2 2 0 AAA ATPase domain OKR_DC_1_N PF03709.15 AID28586.1 - 0.2 11.9 0.0 0.42 10.9 0.0 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain Acetyltransf_1 PF00583.25 AID28587.1 - 1.9e-10 41.0 0.0 2.1e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID28587.1 - 2.2e-07 31.2 0.0 3.1e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID28587.1 - 1.8e-05 24.6 0.0 2.5e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AID28587.1 - 0.011 15.9 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 AID28587.1 - 0.08 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase GNAT_acetyltran PF12746.7 AID28587.1 - 0.13 11.8 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase AnmK PF03702.14 AID28588.1 - 5.4e-74 249.5 0.2 7.2e-74 249.1 0.2 1.0 1 0 0 1 1 1 1 Anhydro-N-acetylmuramic acid kinase FGGY_C PF02782.16 AID28588.1 - 0.012 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Beta-lactamase PF00144.24 AID28589.1 - 8.1e-32 110.8 0.5 2.4e-31 109.2 0.5 1.6 1 1 0 1 1 1 1 Beta-lactamase DUF3509 PF12021.8 AID28589.1 - 0.2 11.4 0.0 0.4 10.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) ABC_tran PF00005.27 AID28590.1 - 3.9e-57 192.6 0.0 4.7e-28 98.4 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 AID28590.1 - 6.7e-16 58.6 0.1 9.6e-07 29.2 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 AID28590.1 - 3.4e-13 49.5 0.0 9.4e-06 25.2 0.0 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID28590.1 - 9.1e-12 45.4 3.0 0.00061 19.7 0.0 4.0 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID28590.1 - 2.2e-08 34.5 6.6 0.0006 20.1 1.1 4.1 3 1 0 3 3 3 2 AAA domain AAA_16 PF13191.6 AID28590.1 - 1.8e-07 31.7 2.1 0.002 18.5 0.0 2.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 AID28590.1 - 5.2e-07 29.3 1.3 0.0042 16.8 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.6 AID28590.1 - 3.6e-05 23.4 1.2 2.4 7.7 0.0 4.1 4 0 0 4 4 4 1 AAA domain DUF87 PF01935.17 AID28590.1 - 3.9e-05 23.8 1.6 0.11 12.5 0.2 2.5 2 0 0 2 2 2 2 Helicase HerA, central domain Sigma54_activat PF00158.26 AID28590.1 - 0.00016 21.4 0.7 1.8 8.2 0.0 3.3 3 0 0 3 3 3 2 Sigma-54 interaction domain AAA_30 PF13604.6 AID28590.1 - 0.00019 21.2 4.0 0.13 11.9 0.3 3.2 3 1 0 3 3 3 2 AAA domain AAA_33 PF13671.6 AID28590.1 - 0.00021 21.5 0.1 0.0063 16.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 AID28590.1 - 0.00082 18.8 0.1 0.95 8.8 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 AID28590.1 - 0.00082 19.3 0.5 0.93 9.4 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase TniB PF05621.11 AID28590.1 - 0.0024 17.3 1.2 0.7 9.3 0.0 3.9 4 0 0 4 4 4 1 Bacterial TniB protein AAA_24 PF13479.6 AID28590.1 - 0.003 17.3 1.5 1 9.1 0.2 2.3 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 AID28590.1 - 0.0037 17.4 0.8 0.39 11.0 0.1 3.5 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 AID28590.1 - 0.0038 16.4 0.5 0.84 8.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain NACHT PF05729.12 AID28590.1 - 0.0046 16.9 1.1 1.5 8.7 0.1 2.6 2 0 0 2 2 2 1 NACHT domain AAA_5 PF07728.14 AID28590.1 - 0.0051 16.8 1.1 6.3 6.8 0.1 3.4 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 AID28590.1 - 0.0061 17.1 0.0 0.83 10.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 AID28590.1 - 0.0075 15.8 0.0 1.7 8.1 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region ABC_ATPase PF09818.9 AID28590.1 - 0.011 14.6 2.0 0.095 11.5 0.1 2.9 3 1 0 3 3 3 0 Predicted ATPase of the ABC class AAA_10 PF12846.7 AID28590.1 - 0.011 14.7 0.5 5.9 5.7 0.1 2.8 3 0 0 3 3 3 0 AAA-like domain Mg_chelatase PF01078.21 AID28590.1 - 0.012 15.0 0.1 2.8 7.3 0.0 3.0 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AIG1 PF04548.16 AID28590.1 - 0.016 14.5 2.8 0.61 9.4 0.1 2.5 2 0 0 2 2 2 0 AIG1 family IstB_IS21 PF01695.17 AID28590.1 - 0.017 14.9 0.1 6.6 6.4 0.0 2.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.29 AID28590.1 - 0.019 15.4 2.4 0.6 10.5 0.1 3.6 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF3987 PF13148.6 AID28590.1 - 0.024 13.7 0.5 0.7 8.8 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) Pox_A32 PF04665.12 AID28590.1 - 0.095 12.1 0.6 11 5.4 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A32 protein ATP-synt_ab PF00006.25 AID28590.1 - 0.1 12.2 1.3 16 5.0 0.0 3.0 3 1 0 4 4 4 0 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 AID28590.1 - 0.11 12.8 0.9 7.5 7.0 0.1 2.4 2 0 0 2 2 2 0 RNA helicase ATPase PF06745.13 AID28590.1 - 0.12 11.6 1.4 13 5.0 0.0 2.6 3 0 0 3 3 3 0 KaiC Hpr_kinase_C PF07475.12 AID28590.1 - 0.29 10.7 2.0 9.6 5.7 0.2 2.5 2 0 0 2 2 2 0 HPr Serine kinase C-terminal domain MMR_HSR1 PF01926.23 AID28590.1 - 0.3 11.2 1.8 2.5 8.2 0.1 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase PRK PF00485.18 AID28590.1 - 2.3 7.9 4.8 7.2 6.3 0.4 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family BPD_transp_1 PF00528.22 AID28591.1 - 6.6e-29 101.0 14.4 1.4e-28 99.9 14.4 1.5 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID28591.1 - 0.13 12.2 3.3 0.33 11.0 0.0 2.8 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 AID28592.1 - 1.4e-41 142.3 9.1 1.4e-41 142.3 9.1 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID28593.1 - 2.3e-85 286.8 0.7 2.9e-85 286.5 0.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SIS_2 PF13580.6 AID28594.1 - 5.9e-10 39.3 0.1 1.4e-09 38.1 0.1 1.7 1 1 0 1 1 1 1 SIS domain SIS PF01380.22 AID28594.1 - 6e-09 35.8 3.1 1.5e-08 34.6 0.0 2.5 3 0 0 3 3 3 1 SIS domain ANTAR PF03861.14 AID28594.1 - 0.0017 18.1 0.1 0.01 15.7 0.0 2.1 2 0 0 2 2 2 1 ANTAR domain UBA_4 PF14555.6 AID28594.1 - 0.0065 16.3 0.2 1.7 8.5 0.1 2.3 1 1 1 2 2 2 2 UBA-like domain BcrAD_BadFG PF01869.20 AID28595.1 - 3.2e-51 174.4 3.8 3.6e-51 174.2 3.8 1.0 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family EPSP_synthase PF00275.20 AID28596.1 - 4.1e-93 312.3 4.0 4.6e-93 312.2 4.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SIS PF01380.22 AID28597.1 - 6e-24 84.4 0.2 9.1e-24 83.8 0.2 1.3 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 AID28597.1 - 6.1e-18 64.6 0.2 1.8e-17 63.1 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 AID28597.1 - 2.9e-09 37.1 0.3 4.8e-06 26.6 0.1 2.4 1 1 1 2 2 2 2 SIS domain MarR_2 PF12802.7 AID28597.1 - 0.08 12.8 0.4 15 5.5 0.0 2.9 3 0 0 3 3 3 0 MarR family Gln-synt_C PF00120.24 AID28598.1 - 1.9e-105 352.6 0.0 2.2e-105 352.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain FCD PF07729.12 AID28599.1 - 8.6e-21 74.7 1.8 1.3e-20 74.1 1.8 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID28599.1 - 6.1e-12 45.0 0.0 1.3e-11 44.0 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 AID28599.1 - 0.13 12.2 0.1 1.7 8.6 0.0 2.5 2 0 0 2 2 2 0 HTH domain Tubulin PF00091.25 AID28600.1 - 2.1e-41 142.3 1.0 2.1e-41 142.3 1.0 1.5 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 AID28600.1 - 2.5e-38 130.3 2.0 7.6e-38 128.7 2.0 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain N36 PF11438.8 AID28600.1 - 0.045 13.6 0.3 1.1 9.1 0.1 2.8 2 0 0 2 2 2 0 36-mer N-terminal peptide of the N protein (N36) NAD_synthase PF02540.17 AID28600.1 - 0.11 11.6 0.2 1.5 7.9 0.0 2.5 3 0 0 3 3 3 0 NAD synthase Tubulin_2 PF13809.6 AID28600.1 - 0.22 10.7 8.1 0.21 10.7 1.6 2.8 1 1 1 2 2 2 0 Tubulin like SBP_bac_1 PF01547.25 AID28602.1 - 5.3e-16 59.4 9.6 8e-16 58.9 9.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID28602.1 - 7.5e-13 48.9 6.7 1.1e-12 48.4 6.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28602.1 - 0.00064 19.2 1.3 0.0021 17.5 0.3 2.0 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID28602.1 - 0.00086 19.1 0.2 0.0031 17.3 0.1 1.9 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID28603.1 - 6.7e-16 58.6 21.4 6.7e-16 58.6 21.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28604.1 - 8e-21 74.6 16.2 8e-21 74.6 16.2 2.3 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID28605.1 - 2.2e-29 102.7 0.0 3.2e-29 102.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28605.1 - 9.6e-12 44.9 0.3 6.4e-11 42.3 0.1 2.3 2 0 0 2 2 2 1 TOBE domain TOBE PF03459.17 AID28605.1 - 8.9e-08 32.3 0.0 2.2e-07 31.0 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID28605.1 - 1.4e-05 25.1 0.3 0.012 15.5 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID28605.1 - 0.00054 20.4 0.0 0.0011 19.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain OB_MalK PF17912.1 AID28605.1 - 0.0015 19.3 0.5 0.015 16.1 0.4 2.8 2 1 0 2 2 2 1 MalK OB fold domain AAA_29 PF13555.6 AID28605.1 - 0.0047 16.6 0.0 0.0094 15.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_28 PF13521.6 AID28605.1 - 0.0091 16.3 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID28605.1 - 0.014 15.7 0.2 0.042 14.1 0.1 1.8 1 1 1 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID28605.1 - 0.018 15.0 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Rad17 PF03215.15 AID28605.1 - 0.021 14.7 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_30 PF13604.6 AID28605.1 - 0.025 14.3 0.1 0.075 12.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain TOBE_3 PF12857.7 AID28605.1 - 0.034 14.1 0.1 0.54 10.2 0.1 2.5 2 0 0 2 2 2 0 TOBE-like domain AAA PF00004.29 AID28605.1 - 0.038 14.4 0.4 0.13 12.7 0.3 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AID28605.1 - 0.041 13.8 0.1 0.076 12.9 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 AID28605.1 - 0.072 12.7 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID28605.1 - 0.087 13.3 0.5 0.13 12.7 0.0 1.4 2 0 0 2 2 1 0 AAA domain Mg_chelatase PF01078.21 AID28605.1 - 0.09 12.2 0.0 0.32 10.3 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_27 PF13514.6 AID28605.1 - 0.12 11.9 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 AID28605.1 - 0.2 11.5 0.0 0.62 9.9 0.0 1.7 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 AID28605.1 - 0.21 10.8 0.0 0.34 10.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain LRR_12 PF18837.1 AID28605.1 - 0.21 11.2 0.4 5.6 6.7 0.0 2.7 2 0 0 2 2 2 0 Leucine-rich repeat AAA_15 PF13175.6 AID28605.1 - 0.27 10.9 0.0 1 9.0 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain Trehalase PF01204.18 AID28606.1 - 6.2e-09 35.2 0.0 1.2e-08 34.2 0.0 1.5 1 1 0 1 1 1 1 Trehalase Glyco_hydro_63 PF03200.16 AID28606.1 - 1.3e-06 27.5 2.4 0.0011 17.8 0.1 3.4 2 2 0 2 2 2 2 Glycosyl hydrolase family 63 C-terminal domain SWIM PF04434.17 AID28608.1 - 3.6e-05 23.3 0.4 7.9e-05 22.2 0.4 1.6 1 0 0 1 1 1 1 SWIM zinc finger AAA_5 PF07728.14 AID28610.1 - 3.1e-37 127.7 0.0 4.3e-37 127.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 AID28610.1 - 0.0019 18.1 0.0 0.0091 15.9 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID28610.1 - 0.0091 16.4 0.1 0.022 15.1 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain Sigma54_activat PF00158.26 AID28610.1 - 0.029 14.1 0.0 4.3 7.0 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_22 PF13401.6 AID28610.1 - 0.087 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID28610.1 - 0.17 12.3 0.2 2.5 8.5 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) B12-binding PF02310.19 AID28611.1 - 0.032 14.2 0.1 0.3 11.1 0.0 2.6 3 0 0 3 3 3 0 B12 binding domain eIF3m_C_helix PF18005.1 AID28611.1 - 0.062 13.0 0.1 0.19 11.5 0.1 1.9 1 0 0 1 1 1 0 eIF3 subunit M, C-terminal helix VWA_CoxE PF05762.14 AID28612.1 - 9.4e-69 231.2 0.1 1.5e-68 230.6 0.1 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 AID28612.1 - 7.1e-06 26.6 0.2 4.8e-05 24.0 0.0 2.3 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF2201 PF09967.9 AID28612.1 - 0.0082 16.3 0.1 0.017 15.3 0.1 1.5 1 0 0 1 1 1 1 VWA-like domain (DUF2201) VWA PF00092.28 AID28612.1 - 0.033 14.4 0.7 0.42 10.8 0.2 2.5 2 1 0 2 2 2 0 von Willebrand factor type A domain Kinase-like PF14531.6 AID28612.1 - 0.052 12.9 0.7 0.091 12.1 0.2 1.5 2 0 0 2 2 2 0 Kinase-like Sugar-bind PF04198.13 AID28614.1 - 2.5e-84 282.4 0.0 3.4e-84 282.0 0.0 1.2 1 0 0 1 1 1 1 Putative sugar-binding domain MarR_2 PF12802.7 AID28614.1 - 0.00048 20.0 0.1 0.0021 17.9 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID28614.1 - 0.0016 18.0 0.0 0.0043 16.6 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID28614.1 - 0.016 15.2 0.1 0.47 10.5 0.0 2.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 AID28614.1 - 0.016 14.7 0.1 0.06 12.9 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_29 PF13551.6 AID28614.1 - 0.03 14.3 0.6 0.08 13.0 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_IclR PF09339.10 AID28614.1 - 0.045 13.5 0.6 0.18 11.6 0.2 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.12 AID28614.1 - 0.096 12.4 0.0 0.35 10.6 0.0 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 MarR PF01047.22 AID28614.1 - 0.14 12.1 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 MarR family SBP_bac_1 PF01547.25 AID28615.1 - 8e-23 81.9 22.0 1.3e-22 81.2 22.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 AID28615.1 - 0.0066 16.2 1.2 0.0066 16.2 1.2 2.5 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 AID28616.1 - 1.3e-13 51.1 21.3 1.3e-13 51.1 18.3 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28617.1 - 3.7e-14 52.9 15.6 3.7e-14 52.9 15.6 2.3 1 1 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component Stealth_CR3 PF17102.5 AID28617.1 - 0.16 11.9 0.1 0.3 11.0 0.1 1.4 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 ABC_tran PF00005.27 AID28618.1 - 3.6e-29 102.0 0.0 6e-29 101.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID28618.1 - 3.2e-05 24.7 0.0 0.00013 22.7 0.0 2.1 1 0 0 1 1 1 1 MalK OB fold domain AAA_16 PF13191.6 AID28618.1 - 0.00058 20.3 0.1 0.0013 19.2 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID28618.1 - 0.0063 16.4 0.0 0.0097 15.8 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 AID28618.1 - 0.0066 16.3 0.0 0.54 10.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 AID28618.1 - 0.014 15.5 0.3 0.053 13.7 0.1 2.1 2 0 0 2 2 2 0 TOBE domain AAA_22 PF13401.6 AID28618.1 - 0.019 15.2 0.0 0.062 13.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 AID28618.1 - 0.019 14.6 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Mg_chelatase PF01078.21 AID28618.1 - 0.025 14.0 0.0 0.049 13.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 AID28618.1 - 0.044 12.8 0.0 0.077 12.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 AID28618.1 - 0.06 13.1 0.0 0.23 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 AID28618.1 - 0.14 12.6 0.0 0.33 11.4 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 AID28618.1 - 0.18 11.8 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 AID28618.1 - 0.19 11.5 0.1 0.43 10.4 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 AID28619.1 - 1.4e-27 96.9 0.0 2.1e-27 96.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28619.1 - 3.1e-08 33.6 0.0 7e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID28619.1 - 8.5e-06 26.5 0.0 4.8e-05 24.1 0.0 2.3 2 0 0 2 2 2 1 MalK OB fold domain AAA_21 PF13304.6 AID28619.1 - 0.0018 18.1 0.9 0.12 12.2 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID28619.1 - 0.004 17.6 1.6 0.013 15.9 1.6 1.9 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID28619.1 - 0.008 16.1 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 AID28619.1 - 0.11 12.2 0.2 0.52 10.0 0.1 2.1 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 AID28619.1 - 0.15 11.4 0.3 9.5 5.5 0.0 2.2 2 0 0 2 2 2 0 KaiC PRK PF00485.18 AID28619.1 - 0.15 11.8 0.1 0.25 11.0 0.1 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family FGGY_N PF00370.21 AID28620.1 - 1.2e-40 139.6 0.0 1.5e-40 139.3 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 AID28620.1 - 9.9e-25 87.4 5.1 9.9e-25 87.4 5.1 2.2 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain HSP70 PF00012.20 AID28620.1 - 0.0018 16.6 0.0 0.0024 16.2 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein 2-Hacid_dh_C PF02826.19 AID28621.1 - 9.4e-58 194.5 0.0 1.7e-57 193.7 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID28621.1 - 1.3e-15 57.2 0.0 1.7e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 AID28621.1 - 0.0007 19.7 0.1 0.0019 18.3 0.0 1.6 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XdhC_C PF13478.6 AID28621.1 - 0.0058 17.1 0.0 0.01 16.3 0.0 1.4 1 0 0 1 1 1 1 XdhC Rossmann domain IlvN PF07991.12 AID28621.1 - 0.0068 16.0 0.0 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 AID28621.1 - 0.02 15.3 0.0 0.039 14.4 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 AID28621.1 - 0.032 14.5 0.1 0.06 13.6 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_2 PF03446.15 AID28621.1 - 0.074 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 AID28621.1 - 0.076 13.1 0.0 0.36 10.9 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DAO PF01266.24 AID28622.1 - 7.7e-54 183.6 0.6 1.2e-53 183.0 0.6 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 AID28622.1 - 2.2e-08 34.0 0.0 4.3e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_oxidored PF12831.7 AID28622.1 - 0.00045 19.7 0.7 0.063 12.6 0.1 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID28622.1 - 0.014 14.7 0.6 0.11 11.7 0.6 2.0 1 1 0 1 1 1 0 FAD binding domain FAD_binding_2 PF00890.24 AID28622.1 - 0.072 12.2 4.7 0.17 10.9 1.4 2.6 3 0 0 3 3 3 0 FAD binding domain 3HCDH_N PF02737.18 AID28622.1 - 0.082 12.8 0.2 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 AID28622.1 - 0.16 11.1 0.1 0.53 9.5 0.1 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF4880 PF16220.5 AID28622.1 - 0.19 11.6 5.2 0.13 12.1 0.4 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4880) Aldolase_II PF00596.21 AID28623.1 - 5.2e-20 72.2 0.0 9.3e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Androgen_recep PF02166.16 AID28623.1 - 0.56 9.0 5.0 1 8.2 5.0 1.3 1 0 0 1 1 1 0 Androgen receptor AP_endonuc_2 PF01261.24 AID28624.1 - 3.4e-08 33.2 0.1 8.5e-08 31.9 0.1 1.6 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel CLIP1_ZNF PF16641.5 AID28624.1 - 0.18 11.7 0.2 0.57 10.1 0.2 1.9 1 0 0 1 1 1 0 CLIP1 zinc knuckle F_bP_aldolase PF01116.20 AID28625.1 - 6.5e-88 294.8 0.1 7.9e-88 294.6 0.1 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Glycos_transf_1 PF00534.20 AID28625.1 - 0.14 11.7 0.0 7.4 6.1 0.0 2.6 1 1 1 2 2 2 0 Glycosyl transferases group 1 DeoRC PF00455.22 AID28626.1 - 9.6e-45 152.4 0.1 1.2e-44 152.1 0.1 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID28626.1 - 9.9e-14 50.8 0.0 1.8e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID28626.1 - 7.7e-07 29.0 0.0 2.1e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 AID28626.1 - 8.6e-06 25.5 0.0 2.6e-05 23.9 0.0 1.8 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 AID28626.1 - 1.4e-05 25.0 0.1 0.0016 18.4 0.0 2.6 3 0 0 3 3 2 1 Helix-turn-helix domain MarR PF01047.22 AID28626.1 - 0.00012 21.9 0.0 0.00028 20.7 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID28626.1 - 0.00044 19.7 0.0 0.00099 18.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID28626.1 - 0.00079 19.3 0.1 0.0023 17.8 0.0 1.8 2 0 0 2 2 1 1 MarR family SpoIIID PF12116.8 AID28626.1 - 0.0013 18.8 0.0 0.0045 17.1 0.0 1.9 1 1 1 2 2 2 1 Stage III sporulation protein D GntR PF00392.21 AID28626.1 - 0.0024 17.5 0.0 0.013 15.2 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 AID28626.1 - 0.0036 17.1 0.0 0.018 14.9 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 AID28626.1 - 0.0062 16.5 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AID28626.1 - 0.015 15.2 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Tnp_4 PF13613.6 AID28626.1 - 0.023 14.4 0.0 0.044 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease RepL PF05732.11 AID28626.1 - 0.03 13.8 0.0 0.081 12.4 0.0 1.6 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) Rrf2 PF02082.20 AID28626.1 - 0.081 13.3 0.0 0.51 10.7 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 AID28626.1 - 0.098 12.6 0.0 0.45 10.5 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain LacI PF00356.21 AID28626.1 - 0.1 12.4 0.1 0.69 9.7 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family FeoC PF09012.10 AID28626.1 - 0.12 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_Mga PF08280.11 AID28626.1 - 0.13 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_7 PF02796.15 AID28626.1 - 0.13 12.3 0.0 0.57 10.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_10 PF04967.12 AID28626.1 - 0.15 11.9 0.0 0.33 10.8 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Fe_dep_repress PF01325.19 AID28626.1 - 0.15 12.2 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TIM PF00121.18 AID28627.1 - 4.2e-71 239.2 0.0 4.8e-71 239.0 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase LacAB_rpiB PF02502.18 AID28628.1 - 2.6e-42 144.1 0.1 3e-42 143.9 0.1 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase Gly_rich_SFCGS PF14272.6 AID28628.1 - 0.058 13.4 0.1 0.11 12.6 0.1 1.4 1 1 0 1 1 1 0 Glycine-rich SFCGS Dak2 PF02734.17 AID28629.1 - 3.5e-48 163.8 13.4 4.3e-48 163.5 13.4 1.1 1 0 0 1 1 1 1 DAK2 domain Dak1 PF02733.17 AID28630.1 - 2.4e-119 397.9 0.0 2.7e-119 397.7 0.0 1.0 1 0 0 1 1 1 1 Dak1 domain DMRL_synthase PF00885.19 AID28631.1 - 7.4e-37 126.3 0.4 8.4e-37 126.1 0.4 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase MFS_1 PF07690.16 AID28632.1 - 7.6e-32 110.6 70.2 1.8e-22 79.7 36.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 AID28632.1 - 0.0089 14.9 3.6 0.0089 14.9 3.6 2.2 1 1 1 2 2 2 1 MFS_1 like family AsnC_trans_reg PF01037.21 AID28633.1 - 2e-16 59.7 0.0 3.2e-16 59.1 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID28633.1 - 5.7e-16 58.1 0.2 8.8e-16 57.5 0.2 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID28633.1 - 1.1e-13 50.5 0.0 2.1e-13 49.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 AID28633.1 - 0.00016 21.7 0.0 0.0003 20.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID28633.1 - 0.00052 19.9 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.16 AID28633.1 - 0.00082 19.1 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 LexA DNA binding domain HTH_Crp_2 PF13545.6 AID28633.1 - 0.03 14.3 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_11 PF08279.12 AID28633.1 - 0.034 14.1 0.0 0.091 12.7 0.0 1.7 2 0 0 2 2 2 0 HTH domain IF-2B PF01008.17 AID28634.1 - 2.8e-58 197.4 0.0 3.4e-58 197.1 0.0 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family HAP2-GCS1 PF10699.9 AID28634.1 - 0.021 14.8 0.0 0.036 14.1 0.0 1.3 1 0 0 1 1 1 0 Male gamete fusion factor DUF2114 PF09887.9 AID28634.1 - 0.089 11.3 0.0 0.17 10.3 0.0 1.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2114) APH PF01636.23 AID28635.1 - 3.7e-32 112.2 0.4 7e-32 111.3 0.4 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 AID28635.1 - 0.00048 19.8 0.0 0.00099 18.7 0.0 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH_6_hur PF04655.14 AID28635.1 - 0.00069 19.1 0.3 0.002 17.5 0.1 1.8 2 0 0 2 2 2 1 Aminoglycoside/hydroxyurea antibiotic resistance kinase Fructosamin_kin PF03881.14 AID28635.1 - 0.0011 18.3 0.1 0.0025 17.1 0.0 1.7 2 0 0 2 2 2 1 Fructosamine kinase EcKinase PF02958.20 AID28635.1 - 0.011 15.1 0.0 0.059 12.7 0.0 1.9 1 1 0 1 1 1 0 Ecdysteroid kinase ABC_tran PF00005.27 AID28636.1 - 1.6e-46 158.2 0.0 1.6e-26 93.5 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID28636.1 - 6.4e-11 42.6 0.3 0.00078 19.3 0.0 4.0 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28636.1 - 2.1e-06 27.3 4.8 0.051 13.0 0.3 3.5 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID28636.1 - 4.2e-06 27.2 5.4 0.025 15.0 0.4 2.8 2 2 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 AID28636.1 - 6.5e-06 26.2 4.0 0.0045 16.9 0.3 3.2 3 0 0 3 3 3 2 RsgA GTPase AAA_23 PF13476.6 AID28636.1 - 7.2e-05 23.4 0.5 0.0067 16.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID28636.1 - 8.2e-05 22.9 6.2 0.68 10.2 0.3 3.5 3 0 0 3 3 3 2 AAA domain AAA_29 PF13555.6 AID28636.1 - 0.00016 21.3 3.2 0.0036 17.0 0.6 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID28636.1 - 0.00022 21.0 10.7 0.0045 16.7 4.9 3.4 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID28636.1 - 0.0013 18.4 6.9 0.84 9.2 0.1 3.7 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 AID28636.1 - 0.0024 17.6 4.3 0.81 9.4 0.1 3.7 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_33 PF13671.6 AID28636.1 - 0.0048 17.1 5.0 0.25 11.5 0.3 3.1 2 2 0 2 2 2 1 AAA domain AAA_14 PF13173.6 AID28636.1 - 0.0062 16.6 0.3 7.1 6.7 0.1 3.2 3 0 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 AID28636.1 - 0.0083 16.2 1.2 6 7.0 0.1 3.0 3 0 0 3 3 3 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID28636.1 - 0.0095 16.5 3.0 1.2 9.6 0.2 2.9 2 1 0 2 2 2 1 AAA domain TsaE PF02367.17 AID28636.1 - 0.0098 15.9 2.0 3.1 7.8 0.1 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 AID28636.1 - 0.013 15.1 2.3 2.9 7.4 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 AID28636.1 - 0.02 14.8 5.5 4.4 7.2 0.5 3.4 3 0 0 3 3 3 0 NACHT domain ABC_ATPase PF09818.9 AID28636.1 - 0.022 13.6 4.5 2.7 6.7 0.9 3.4 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_28 PF13521.6 AID28636.1 - 0.027 14.7 2.5 1.1 9.4 0.1 2.9 3 0 0 3 3 3 0 AAA domain AAA_15 PF13175.6 AID28636.1 - 0.047 13.4 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 AID28636.1 - 0.06 13.8 9.9 8.9 6.8 0.1 4.1 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 AID28636.1 - 0.087 13.1 5.0 11 6.3 0.4 3.8 2 1 1 3 3 3 0 Putative exonuclease SbcCD, C subunit AAA_24 PF13479.6 AID28636.1 - 0.14 11.9 1.1 5.5 6.7 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 AID28636.1 - 0.16 11.9 1.8 5.7 6.9 0.0 3.1 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_13 PF13166.6 AID28636.1 - 0.18 10.4 0.0 0.69 8.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 AID28636.1 - 0.25 11.0 1.2 22 4.6 0.1 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain NB-ARC PF00931.22 AID28636.1 - 0.26 10.4 4.8 2.7 7.1 0.3 2.9 3 0 0 3 3 3 0 NB-ARC domain DLIC PF05783.11 AID28636.1 - 0.34 9.7 2.1 0.41 9.4 0.1 1.8 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) APS_kinase PF01583.20 AID28636.1 - 0.71 9.8 3.3 13 5.7 0.1 2.8 3 0 0 3 3 3 0 Adenylylsulphate kinase Zeta_toxin PF06414.12 AID28636.1 - 0.92 8.8 3.4 0.43 9.8 0.1 2.1 3 0 0 3 3 3 0 Zeta toxin dNK PF01712.19 AID28636.1 - 1.6 8.5 3.2 24 4.7 0.2 2.2 2 0 0 2 2 2 0 Deoxynucleoside kinase NTPase_1 PF03266.15 AID28636.1 - 4.3 7.2 7.6 11 5.9 0.6 3.0 3 0 0 3 3 3 0 NTPase BPD_transp_2 PF02653.16 AID28637.1 - 7.6e-48 163.0 40.2 1e-47 162.5 40.2 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF1427 PF07235.11 AID28637.1 - 0.0013 18.6 2.4 0.0037 17.2 2.4 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1427) SLATT_4 PF18186.1 AID28637.1 - 0.051 13.2 1.2 4.8 6.8 0.0 2.3 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 Gly-zipper_Omp PF13488.6 AID28637.1 - 5.1 7.2 17.5 6.6 6.8 8.7 3.0 2 0 0 2 2 2 0 Glycine zipper Peripla_BP_4 PF13407.6 AID28638.1 - 4.7e-31 108.3 10.3 5.7e-31 108.0 10.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28638.1 - 1.4e-10 41.1 1.3 3e-10 40.0 1.3 1.5 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID28638.1 - 0.00022 21.6 0.3 0.00093 19.6 0.0 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain CoA_binding_2 PF13380.6 AID28638.1 - 0.0068 16.9 0.4 0.018 15.5 0.1 1.8 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 AID28638.1 - 0.097 13.4 1.9 8.1 7.2 0.1 2.9 3 0 0 3 3 3 0 CoA binding domain adh_short PF00106.25 AID28639.1 - 8.7e-37 126.5 1.5 1.5e-36 125.7 1.5 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID28639.1 - 1e-35 123.4 6.9 3.2e-35 121.8 7.0 1.7 1 1 1 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Aldolase_II PF00596.21 AID28639.1 - 3.5e-30 105.3 0.0 7.3e-28 97.8 0.0 2.7 2 1 0 2 2 2 1 Class II Aldolase and Adducin N-terminal domain Epimerase PF01370.21 AID28639.1 - 4.5e-06 26.3 0.6 9.5e-06 25.2 0.2 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family KR PF08659.10 AID28639.1 - 8.9e-06 25.7 1.0 1.9e-05 24.7 1.0 1.6 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 AID28639.1 - 0.0013 18.7 3.1 0.003 17.5 3.1 1.6 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 AID28639.1 - 0.003 17.0 0.1 0.011 15.2 0.0 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3HCDH_N PF02737.18 AID28639.1 - 0.0031 17.4 0.8 0.0083 16.0 0.8 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 AID28639.1 - 0.01 16.1 2.1 0.023 15.0 1.0 2.1 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 AID28639.1 - 0.012 16.2 0.7 0.035 14.7 0.7 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 AID28639.1 - 0.026 14.8 0.3 0.059 13.6 0.3 1.6 1 0 0 1 1 1 0 TrkA-N domain 3Beta_HSD PF01073.19 AID28639.1 - 0.026 13.5 0.2 0.041 12.9 0.2 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family UDPG_MGDP_dh_N PF03721.14 AID28639.1 - 0.048 13.2 0.2 0.086 12.4 0.2 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 AID28639.1 - 0.069 12.5 0.5 0.16 11.3 0.1 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NmrA PF05368.13 AID28639.1 - 0.25 10.9 3.5 0.43 10.1 3.5 1.4 1 0 0 1 1 1 0 NmrA-like family Sugar-bind PF04198.13 AID28640.1 - 9.1e-74 247.8 0.0 1.1e-73 247.5 0.0 1.1 1 0 0 1 1 1 1 Putative sugar-binding domain Sigma70_r4_2 PF08281.12 AID28640.1 - 0.00018 21.1 1.8 0.00029 20.5 0.2 2.3 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_28 PF13518.6 AID28640.1 - 0.0045 17.1 0.2 0.015 15.4 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID28640.1 - 0.005 16.6 1.2 0.018 14.8 0.1 2.5 3 0 0 3 3 3 1 Homeodomain-like domain Terminase_5 PF06056.12 AID28640.1 - 0.0059 16.5 0.1 0.022 14.6 0.1 1.9 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) GerE PF00196.19 AID28640.1 - 0.0066 16.0 0.0 0.045 13.3 0.0 2.3 3 0 0 3 3 3 1 Bacterial regulatory proteins, luxR family MarR_2 PF12802.7 AID28640.1 - 0.0078 16.1 0.2 0.064 13.1 0.0 2.6 2 0 0 2 2 2 1 MarR family HTH_31 PF13560.6 AID28640.1 - 0.0086 16.4 0.9 0.12 12.7 0.1 2.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 AID28640.1 - 0.015 15.3 0.0 0.1 12.7 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix HTH_29 PF13551.6 AID28640.1 - 0.018 15.1 0.5 0.049 13.7 0.1 2.0 2 0 0 2 2 1 0 Winged helix-turn helix HTH_24 PF13412.6 AID28640.1 - 0.023 14.2 0.0 0.079 12.5 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_40 PF14493.6 AID28640.1 - 0.028 14.8 0.0 1 9.9 0.0 2.6 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID28640.1 - 0.03 14.3 0.2 0.24 11.4 0.0 2.6 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain TrmB PF01978.19 AID28640.1 - 0.035 14.0 0.0 0.15 12.0 0.0 2.0 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_10 PF04967.12 AID28640.1 - 0.04 13.7 0.2 0.23 11.3 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain YedD PF13987.6 AID28640.1 - 0.051 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 YedD-like protein HTH_11 PF08279.12 AID28640.1 - 0.052 13.5 0.2 2.3 8.2 0.0 2.7 2 0 0 2 2 2 0 HTH domain HTH_22 PF13309.6 AID28640.1 - 0.067 13.3 0.0 0.36 10.9 0.0 2.1 2 0 0 2 2 2 0 HTH domain HTH_30 PF13556.6 AID28640.1 - 0.11 12.3 0.1 0.3 10.9 0.1 1.7 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Fe_dep_repress PF01325.19 AID28640.1 - 0.11 12.7 1.0 0.66 10.2 0.0 2.6 4 0 0 4 4 2 0 Iron dependent repressor, N-terminal DNA binding domain AMP-binding PF00501.28 AID28642.1 - 2.7e-87 293.1 0.1 3.2e-87 292.9 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID28642.1 - 2.3e-20 73.3 0.4 5.4e-20 72.2 0.4 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain TetR_C_27 PF17935.1 AID28643.1 - 7.6e-33 112.8 0.5 1.2e-32 112.1 0.5 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID28643.1 - 8.2e-14 51.1 0.0 1.5e-13 50.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 AID28643.1 - 8.6e-06 26.0 0.1 1.6e-05 25.2 0.1 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF1338 PF07063.13 AID28643.1 - 0.018 14.2 0.1 0.025 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) HTH_7 PF02796.15 AID28643.1 - 0.034 14.2 0.0 0.073 13.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 AID28643.1 - 0.052 13.4 0.0 0.097 12.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID28643.1 - 0.081 12.8 0.0 0.29 11.1 0.0 1.9 1 1 1 2 2 2 0 MarR family HTH_29 PF13551.6 AID28643.1 - 0.081 13.0 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix IF2_N PF04760.15 AID28643.1 - 0.1 12.5 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region HTH_38 PF13936.6 AID28643.1 - 0.11 12.3 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 AID28643.1 - 0.12 12.5 0.0 0.68 10.1 0.0 2.4 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID28643.1 - 0.18 11.6 0.0 0.45 10.4 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HlyD_D23 PF16576.5 AID28644.1 - 2.3e-19 69.5 0.8 4.5e-19 68.5 0.8 1.5 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID28644.1 - 7.7e-19 68.4 2.2 1.6e-14 54.5 0.4 2.7 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID28644.1 - 3.2e-11 42.9 9.3 1.5e-10 40.7 0.1 3.4 3 1 0 3 3 3 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID28644.1 - 0.0004 20.1 0.9 0.28 11.0 0.2 2.9 3 0 0 3 3 3 2 Biotin-requiring enzyme OEP PF02321.18 AID28644.1 - 0.0062 16.4 5.7 0.011 15.6 5.7 1.3 1 0 0 1 1 1 1 Outer membrane efflux protein AMP-binding_C PF13193.6 AID28645.1 - 3e-16 60.1 0.1 4e-16 59.7 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DDE_Tnp_ISAZ013 PF07592.11 AID28647.1 - 1.9e-140 467.2 0.0 2.2e-140 467.0 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain ACR_tran PF00873.19 AID28649.1 - 3.3e-167 558.1 1.9 3.9e-167 557.8 1.9 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID28649.1 - 0.063 12.7 27.7 0.096 12.1 8.1 2.7 3 0 0 3 3 3 0 Protein export membrane protein Bac_luciferase PF00296.20 AID28650.1 - 1.9e-65 221.4 6.3 2.4e-65 221.0 6.3 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase HTH_38 PF13936.6 AID28650.1 - 0.23 11.3 1.2 0.5 10.2 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain AA_permease_2 PF13520.6 AID28651.1 - 4.7e-106 355.2 58.2 6.8e-106 354.6 58.2 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 AID28651.1 - 1.7e-06 26.9 55.7 2.7e-05 22.9 55.7 2.1 1 1 0 1 1 1 1 Amino acid permease GCV_T PF01571.21 AID28652.1 - 8.9e-73 244.8 0.0 1.4e-72 244.1 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DUF1989 PF09347.10 AID28652.1 - 2.9e-50 170.2 0.1 2.7e-43 147.5 0.0 2.6 3 0 0 3 3 3 2 Domain of unknown function (DUF1989) GCV_T_C PF08669.11 AID28652.1 - 1.7e-16 59.9 0.2 3.4e-16 58.9 0.2 1.6 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID28654.1 - 4.1e-49 166.5 5.6 5e-49 166.2 5.6 1.1 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family GCV_T PF01571.21 AID28654.1 - 9.6e-08 31.7 0.0 1.3e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GARS_N PF02844.15 AID28654.1 - 0.021 15.6 0.1 9.9 7.0 0.0 2.7 3 0 0 3 3 3 0 Phosphoribosylglycinamide synthetase, N domain GCV_T PF01571.21 AID28655.1 - 1.8e-66 224.2 0.0 2.8e-66 223.5 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SO_alpha_A3 PF17806.1 AID28655.1 - 5.8e-35 119.5 0.1 1.6e-34 118.1 0.1 1.7 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_4 PF13510.6 AID28655.1 - 1.3e-25 89.2 0.0 3e-25 88.1 0.0 1.7 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain GCV_T_C PF08669.11 AID28655.1 - 7.1e-15 54.7 0.0 2.6e-14 52.9 0.0 2.0 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAD_oxidored PF12831.7 AID28655.1 - 3.9e-09 36.4 1.1 3.9e-09 36.4 1.1 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID28655.1 - 1.5e-06 27.6 2.7 1.5e-06 27.6 2.7 2.2 2 1 1 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 AID28655.1 - 3.4e-06 26.5 0.1 9.1e-06 25.1 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28655.1 - 2.7e-05 23.1 1.7 0.0003 19.6 0.6 2.2 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 AID28655.1 - 4.8e-05 22.7 0.1 0.00012 21.5 0.1 1.6 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 AID28655.1 - 0.0029 16.9 0.1 0.0046 16.3 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AID28655.1 - 0.0044 17.2 0.5 0.017 15.4 0.5 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 AID28655.1 - 0.0076 15.4 0.7 0.0076 15.4 0.7 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 AID28655.1 - 0.33 10.2 0.5 1.1 8.5 0.6 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SoxD PF04267.12 AID28656.1 - 2.3e-30 104.5 0.0 2.6e-30 104.3 0.0 1.0 1 0 0 1 1 1 1 Sarcosine oxidase, delta subunit family Lar_restr_allev PF14354.6 AID28656.1 - 0.0061 16.9 0.0 0.0094 16.3 0.0 1.4 1 1 0 1 1 1 1 Restriction alleviation protein Lar DAO PF01266.24 AID28657.1 - 2.6e-55 188.4 1.2 3.1e-55 188.2 1.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID28657.1 - 3.2e-05 24.1 0.1 3.2e-05 24.1 0.1 2.9 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID28657.1 - 0.0002 20.7 0.3 0.0017 17.7 0.2 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 AID28657.1 - 0.00075 18.7 2.4 0.023 13.8 0.9 2.3 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 AID28657.1 - 0.0052 16.1 0.7 0.046 13.0 0.7 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID28657.1 - 0.0059 15.9 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 AID28657.1 - 0.024 13.9 1.7 0.2 10.9 0.4 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID28657.1 - 0.12 13.0 5.8 3.1 8.4 0.0 3.1 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 AID28657.1 - 0.16 10.7 3.9 0.63 8.8 1.1 2.1 2 0 0 2 2 2 0 Tryptophan halogenase HI0933_like PF03486.14 AID28657.1 - 0.38 9.4 1.4 1.8 7.2 0.2 2.0 2 0 0 2 2 2 0 HI0933-like protein NAD_binding_9 PF13454.6 AID28657.1 - 0.67 9.9 2.3 1.5 8.8 0.7 2.3 2 1 0 2 2 2 0 FAD-NAD(P)-binding Gln-synt_C PF00120.24 AID28658.1 - 3e-110 368.5 0.0 3.5e-110 368.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AID28658.1 - 0.00033 20.3 0.0 0.00081 19.1 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 AID28658.1 - 0.17 11.7 0.1 1.7 8.5 0.1 2.3 1 1 0 1 1 1 0 Glutamine synthetase N-terminal domain Glu_synthase PF01645.17 AID28659.1 - 3.2e-82 276.6 0.3 2.9e-74 250.4 0.4 2.0 2 0 0 2 2 2 2 Conserved region in glutamate synthase FMN_dh PF01070.18 AID28659.1 - 1.4e-14 53.9 1.6 2.1e-13 50.1 1.2 2.4 3 0 0 3 3 3 1 FMN-dependent dehydrogenase IMPDH PF00478.25 AID28659.1 - 4.1e-09 35.9 1.2 2.8e-08 33.2 1.9 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 AID28659.1 - 5.5e-09 35.9 1.6 9.9e-09 35.0 1.3 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase His_biosynth PF00977.21 AID28659.1 - 5.7e-05 22.7 0.5 0.00012 21.6 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein QRPTase_C PF01729.19 AID28659.1 - 0.00074 19.3 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain ThiG PF05690.14 AID28659.1 - 0.0019 17.5 0.7 0.0029 17.0 0.1 1.5 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 AID28659.1 - 0.04 13.3 0.1 0.067 12.6 0.1 1.3 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator DHO_dh PF01180.21 AID28659.1 - 0.12 11.5 1.0 0.23 10.6 0.5 1.5 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase GXGXG PF01493.19 AID28660.1 - 6.2e-15 55.3 10.6 1.9e-14 53.7 10.6 1.6 1 1 0 1 1 1 1 GXGXG motif GATase_6 PF13522.6 AID28661.1 - 7.5e-22 78.0 0.0 1.2e-21 77.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 AID28661.1 - 1.8e-19 69.9 0.0 2.6e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 AID28661.1 - 0.013 14.4 0.1 0.021 13.7 0.1 1.3 1 0 0 1 1 1 0 Glutamine amidotransferases class-II AA_permease PF00324.21 AID28665.1 - 3.3e-30 105.1 39.9 4.2e-30 104.8 39.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 AID28665.1 - 5.9e-29 101.1 43.9 7.1e-29 100.9 43.5 1.2 1 1 0 1 1 1 1 Amino acid permease Babuvirus_MP PF07234.11 AID28665.1 - 1.3 9.2 11.8 0.24 11.6 6.0 2.3 2 0 0 2 2 2 0 Movement and RNA silencing protein WBS28 PF15164.6 AID28667.1 - 0.014 14.7 0.1 0.016 14.5 0.1 1.0 1 0 0 1 1 1 0 Williams-Beuren syndrome chromosomal region 28 protein homologue FixQ PF05545.11 AID28667.1 - 0.064 13.2 0.1 0.064 13.2 0.1 2.0 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ 7tm_1 PF00001.21 AID28667.1 - 0.14 11.5 0.4 0.17 11.2 0.0 1.4 2 0 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) DUF3742 PF12553.8 AID28667.1 - 2.5 8.3 6.2 5.9 7.0 1.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3742) DUF4051 PF13260.6 AID28667.1 - 5.8 6.7 6.4 0.76 9.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) AA_permease_2 PF13520.6 AID28668.1 - 0.0015 17.5 1.6 0.0017 17.2 1.6 1.0 1 0 0 1 1 1 1 Amino acid permease Wzy_C_2 PF11846.8 AID28668.1 - 0.052 13.5 0.2 0.054 13.4 0.2 1.2 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal FA_desaturase PF00487.24 AID28668.1 - 0.058 13.2 0.1 0.059 13.2 0.1 1.0 1 0 0 1 1 1 0 Fatty acid desaturase GCV_T PF01571.21 AID28669.1 - 1.9e-59 201.1 0.0 2.5e-59 200.7 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID28669.1 - 2.5e-14 52.9 0.0 8.5e-14 51.2 0.0 1.9 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Fer2 PF00111.27 AID28671.1 - 8.2e-10 38.5 0.6 1.6e-09 37.6 0.2 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 AID28671.1 - 8.1e-06 26.4 0.1 8.7e-05 23.1 0.1 2.2 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2_4 PF13510.6 AID28671.1 - 0.003 17.6 0.0 0.007 16.4 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 AID28671.1 - 0.077 13.3 0.0 0.37 11.2 0.0 2.1 2 0 0 2 2 2 0 Oxidoreductase FAD-binding domain DUF3445 PF11927.8 AID28672.1 - 1.9e-51 174.9 0.0 2.3e-51 174.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3445) HTH_3 PF01381.22 AID28673.1 - 1.7e-15 56.8 0.0 2.5e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix Cupin_2 PF07883.11 AID28673.1 - 1.4e-13 50.4 0.0 3.5e-13 49.1 0.0 1.7 2 0 0 2 2 2 1 Cupin domain HTH_31 PF13560.6 AID28673.1 - 3e-12 46.7 0.0 4.8e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AID28673.1 - 3.2e-10 39.9 0.0 5.8e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 AID28673.1 - 5.5e-06 26.7 0.0 9.5e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain AraC_binding PF02311.19 AID28673.1 - 0.00011 22.1 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 AID28673.1 - 0.00034 20.2 0.0 0.00062 19.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 AID28673.1 - 0.00066 19.5 0.0 0.0024 17.7 0.0 2.0 2 1 0 2 2 2 1 Helix-turn-helix domain FMO-like PF00743.19 AID28674.1 - 8.1e-44 149.9 0.0 6.1e-32 110.7 0.0 2.0 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 AID28674.1 - 5.5e-15 55.4 0.2 7.2e-11 41.9 0.0 3.6 3 1 1 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 AID28674.1 - 6.5e-10 38.7 0.0 1.7e-07 30.7 0.0 3.1 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 AID28674.1 - 3.3e-09 36.4 0.0 2.9e-07 30.0 0.0 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID28674.1 - 7.6e-09 35.7 0.6 1.1e-05 25.5 0.0 3.6 3 1 0 3 3 3 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID28674.1 - 0.0036 17.5 0.0 0.037 14.3 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID28674.1 - 0.15 11.6 0.2 12 5.3 0.0 3.0 2 2 0 3 3 3 0 FAD dependent oxidoreductase BPD_transp_1 PF00528.22 AID28675.1 - 9.9e-27 93.9 20.4 1.2e-21 77.3 9.8 5.5 4 2 2 6 6 6 3 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID28676.1 - 5.3e-32 111.2 0.0 8e-32 110.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28676.1 - 6.7e-06 26.1 0.2 0.0064 16.3 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID28676.1 - 2.9e-05 23.7 0.0 6e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID28676.1 - 0.00059 20.3 0.1 0.001 19.4 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID28676.1 - 0.0053 16.2 0.0 8 5.8 0.0 2.9 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID28676.1 - 0.024 14.5 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 AID28676.1 - 0.026 14.8 0.0 0.079 13.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID28676.1 - 0.037 14.5 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3987 PF13148.6 AID28676.1 - 0.037 13.0 0.0 0.057 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ABC_ATPase PF09818.9 AID28676.1 - 0.047 12.5 0.0 1.7 7.4 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 AID28676.1 - 0.078 13.1 0.0 0.18 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID28676.1 - 0.12 12.2 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain OpuAC PF04069.12 AID28677.1 - 6.6e-53 179.9 2.3 7.6e-53 179.7 2.3 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system adh_short_C2 PF13561.6 AID28679.1 - 8.5e-59 198.9 5.1 9.8e-59 198.7 5.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28679.1 - 3.2e-51 173.6 4.3 3.7e-51 173.4 4.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28679.1 - 1.6e-09 38.0 4.5 2.3e-09 37.4 4.5 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28679.1 - 0.036 13.5 1.3 0.063 12.7 1.3 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family NTP_transf_9 PF04248.12 AID28680.1 - 1.3e-54 182.1 0.1 1.7e-27 95.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF427) SBP_bac_5 PF00496.22 AID28681.1 - 1.8e-75 254.3 0.2 2.3e-75 253.9 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle FAM183 PF14886.6 AID28682.1 - 0.085 13.6 0.0 0.092 13.5 0.0 1.1 1 0 0 1 1 1 0 FAM183A and FAM183B related HTH_1 PF00126.27 AID28683.1 - 3.6e-22 78.1 1.7 8.4e-22 76.9 0.9 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID28683.1 - 2.4e-19 69.5 2.2 4.1e-19 68.8 2.2 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 AID28683.1 - 0.00097 18.9 0.1 0.002 17.9 0.1 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_AsnC-type PF13404.6 AID28683.1 - 0.056 13.3 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_28 PF13518.6 AID28683.1 - 0.074 13.2 0.1 0.14 12.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 AID28683.1 - 0.084 12.4 0.1 0.4 10.3 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 AID28683.1 - 0.13 12.4 0.1 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DDE_5 PF13546.6 AID28685.1 - 1.7e-18 67.0 0.6 2.2e-18 66.6 0.6 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_2 PF04693.12 AID28686.1 - 0.00023 20.5 0.0 0.00027 20.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 AID28686.1 - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Transposase DDE domain ABC_tran PF00005.27 AID28687.1 - 1.1e-58 197.6 0.0 2.4e-28 99.4 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 AID28687.1 - 4.8e-36 123.1 0.3 2.9e-17 63.0 0.1 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID28687.1 - 7.7e-15 55.5 3.6 3.2e-06 27.2 0.1 4.0 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28687.1 - 2.4e-10 40.2 0.0 7.2e-05 22.3 0.0 2.6 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID28687.1 - 2.1e-08 34.7 4.5 0.0014 19.1 0.5 2.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 AID28687.1 - 3.7e-08 33.7 0.0 0.0056 16.9 0.0 2.8 2 2 0 2 2 2 2 AAA domain PRK PF00485.18 AID28687.1 - 6.1e-05 22.9 0.0 0.12 12.1 0.0 2.6 3 0 0 3 3 2 2 Phosphoribulokinase / Uridine kinase family AAA PF00004.29 AID28687.1 - 6.4e-05 23.4 0.2 0.4 11.1 0.0 3.5 2 2 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID28687.1 - 7.2e-05 22.5 0.1 0.43 10.3 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_33 PF13671.6 AID28687.1 - 0.0003 21.0 0.2 0.23 11.6 0.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 AID28687.1 - 0.00038 20.5 1.3 1.1 9.3 0.1 3.0 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID28687.1 - 0.00042 19.8 0.0 0.74 9.2 0.0 3.6 4 0 0 4 4 4 1 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 AID28687.1 - 0.00058 19.6 0.1 0.34 10.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID28687.1 - 0.00083 19.0 0.7 1.9 8.0 0.0 3.1 3 1 0 3 3 3 2 AAA domain RsgA_GTPase PF03193.16 AID28687.1 - 0.00085 19.3 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase APS_kinase PF01583.20 AID28687.1 - 0.003 17.4 0.1 0.36 10.7 0.0 2.3 2 0 0 2 2 2 1 Adenylylsulphate kinase Zeta_toxin PF06414.12 AID28687.1 - 0.0061 15.9 0.1 0.88 8.8 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin NACHT PF05729.12 AID28687.1 - 0.0069 16.3 2.2 0.88 9.5 0.3 3.0 3 0 0 3 3 2 1 NACHT domain AAA_23 PF13476.6 AID28687.1 - 0.0076 16.8 0.0 0.61 10.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 AID28687.1 - 0.0083 15.8 0.0 1.8 8.3 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_7 PF12775.7 AID28687.1 - 0.011 15.3 0.0 1.5 8.3 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_13 PF13166.6 AID28687.1 - 0.012 14.3 0.1 0.18 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 AID28687.1 - 0.017 15.0 0.0 2 8.3 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.22 AID28687.1 - 0.018 15.4 0.4 5.8 7.4 0.1 2.4 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 AID28687.1 - 0.026 13.7 0.0 5.5 6.1 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 AID28687.1 - 0.036 13.8 0.0 0.57 9.8 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 AID28687.1 - 0.039 14.2 0.5 7.4 6.9 0.1 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit NTPase_1 PF03266.15 AID28687.1 - 0.044 13.7 0.2 2.4 8.0 0.0 2.5 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 AID28687.1 - 0.047 14.2 0.1 5.3 7.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AID28687.1 - 0.059 13.4 0.1 1.3 9.0 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATP-synt_ab PF00006.25 AID28687.1 - 0.067 12.8 0.4 1.2 8.7 0.2 2.4 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain ATPase PF06745.13 AID28687.1 - 0.071 12.5 0.2 12 5.2 0.0 2.3 2 0 0 2 2 2 0 KaiC CbiA PF01656.23 AID28687.1 - 0.084 12.9 0.5 5.7 7.0 0.0 2.6 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain IstB_IS21 PF01695.17 AID28687.1 - 0.12 12.1 0.1 8.2 6.1 0.0 2.7 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF87 PF01935.17 AID28687.1 - 0.14 12.3 0.2 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain tRNA_lig_kinase PF08303.11 AID28687.1 - 0.21 11.7 0.0 0.51 10.4 0.0 1.6 2 0 0 2 2 1 0 tRNA ligase kinase domain BPD_transp_1 PF00528.22 AID28688.1 - 2.1e-22 79.8 13.3 2.1e-22 79.8 13.3 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID28688.1 - 4.4e-10 39.4 0.6 4.4e-10 39.4 0.6 3.2 3 1 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C DUF677 PF05055.12 AID28688.1 - 1.9 7.3 3.6 2.9 6.7 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) BPD_transp_1 PF00528.22 AID28689.1 - 4.4e-35 121.1 17.6 4.4e-35 121.1 17.6 2.1 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component PIG-P PF08510.12 AID28689.1 - 0.31 11.0 2.9 0.81 9.6 2.9 1.7 1 0 0 1 1 1 0 PIG-P SBP_bac_5 PF00496.22 AID28690.1 - 5.4e-75 252.7 1.0 6.9e-75 252.4 1.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MR_MLE_C PF13378.6 AID28691.1 - 2e-31 109.3 0.0 3.2e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28691.1 - 9.4e-17 61.3 0.0 1.6e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE_C PF13378.6 AID28692.1 - 5.5e-38 130.7 0.9 1.4e-37 129.4 0.4 1.8 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28692.1 - 4.1e-15 56.0 0.0 7.7e-15 55.1 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GntR PF00392.21 AID28693.1 - 6.6e-17 60.9 1.1 1.3e-16 60.0 1.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 AID28693.1 - 1.1e-14 54.9 8.8 2.4e-14 53.9 8.8 1.5 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 AID28693.1 - 0.035 14.5 0.1 0.14 12.6 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator HTH_24 PF13412.6 AID28693.1 - 0.07 12.7 0.1 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding 2OG-FeII_Oxy_3 PF13640.6 AID28694.1 - 1.4e-06 29.1 0.0 2.4e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily HTH_1 PF00126.27 AID28695.1 - 7.6e-22 77.0 0.6 1.4e-21 76.2 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID28695.1 - 0.037 13.9 0.1 0.087 12.7 0.0 1.7 2 0 0 2 2 2 0 MarR family HTH_11 PF08279.12 AID28695.1 - 0.12 12.4 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 HTH domain P22_Cro PF14549.6 AID28695.1 - 0.16 11.8 0.4 0.41 10.5 0.2 1.7 1 1 0 1 1 1 0 DNA-binding transcriptional regulator Cro LysR_substrate PF03466.20 AID28696.1 - 3.5e-11 42.9 0.5 3.8e-11 42.8 0.5 1.0 1 0 0 1 1 1 1 LysR substrate binding domain HlyD_D23 PF16576.5 AID28697.1 - 1.8e-14 53.5 0.1 3.2e-14 52.7 0.1 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID28697.1 - 3.1e-11 43.9 1.4 7.5e-08 33.0 0.1 3.1 3 0 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID28697.1 - 7.1e-11 41.8 2.6 6.9e-10 38.6 1.5 2.9 3 0 0 3 3 3 1 Biotin-lipoyl like DUF4349 PF14257.6 AID28697.1 - 0.059 12.8 0.7 0.3 10.5 0.0 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4349) ACR_tran PF00873.19 AID28698.1 - 0 1152.6 17.0 0 1152.4 17.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 AID28698.1 - 7.7e-18 64.5 36.3 1.1e-09 37.7 11.4 2.8 3 0 0 3 3 3 2 MMPL family SecD_SecF PF02355.16 AID28698.1 - 9.6e-08 31.6 31.9 4.7e-05 22.9 14.5 2.4 2 0 0 2 2 2 2 Protein export membrane protein PrgI PF12666.7 AID28698.1 - 0.0068 17.1 5.0 0.0068 17.1 5.0 5.2 6 0 0 6 6 6 1 PrgI family protein DUF4321 PF14209.6 AID28698.1 - 0.83 9.6 4.7 0.3 11.0 0.6 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4321) Patched PF02460.18 AID28698.1 - 0.9 7.5 29.8 0.15 10.1 12.3 2.1 2 0 0 2 2 2 0 Patched family TetR_N PF00440.23 AID28700.1 - 3.4e-12 45.9 0.0 9.3e-12 44.6 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Peripla_BP_4 PF13407.6 AID28701.1 - 1.8e-32 112.9 0.0 2.6e-32 112.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 AID28701.1 - 1.6e-12 47.0 0.3 3.7e-12 45.8 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_Tnp_ISL3 PF13542.6 AID28701.1 - 0.00029 20.2 0.1 0.00085 18.7 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 AID28701.1 - 0.0018 18.0 0.1 0.016 15.0 0.0 2.3 1 1 1 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 AID28701.1 - 0.0049 16.9 0.3 0.089 12.8 0.1 2.7 1 1 1 2 2 2 1 Winged helix-turn helix MarR_2 PF12802.7 AID28701.1 - 0.0062 16.4 0.0 0.14 12.0 0.0 2.9 2 1 0 2 2 2 1 MarR family HTH_IclR PF09339.10 AID28701.1 - 0.057 13.2 0.0 0.17 11.7 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 AID28701.1 - 0.11 12.5 0.2 0.59 10.1 0.0 2.3 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_38 PF13936.6 AID28701.1 - 0.14 12.0 0.0 0.34 10.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 AID28702.1 - 5e-30 104.8 0.0 8.8e-30 104.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28702.1 - 9.1e-08 32.3 0.8 0.0019 18.1 0.6 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28702.1 - 3.2e-05 23.5 0.0 0.00041 19.9 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID28702.1 - 0.001 19.0 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID28702.1 - 0.001 19.6 0.0 0.0018 18.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28702.1 - 0.0012 18.6 0.0 0.0047 16.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28702.1 - 0.0018 18.0 0.0 0.0037 17.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID28702.1 - 0.017 15.5 0.1 0.022 15.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ABC_ATPase PF09818.9 AID28702.1 - 0.017 13.9 1.2 0.19 10.5 0.1 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 AID28702.1 - 0.024 14.7 0.3 0.067 13.3 0.1 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_5 PF07728.14 AID28702.1 - 0.15 12.1 0.1 0.46 10.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 AID28702.1 - 0.17 12.4 0.4 0.86 10.2 0.4 2.2 1 1 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID28703.1 - 3.7e-53 180.4 39.7 4.3e-53 180.2 39.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Flp_Fap PF04964.14 AID28703.1 - 4 7.3 17.5 0.93 9.4 0.5 4.4 5 0 0 5 5 5 0 Flp/Fap pilin component Peripla_BP_4 PF13407.6 AID28704.1 - 5.4e-38 131.0 2.6 6.7e-38 130.7 2.6 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28704.1 - 2.8e-05 23.7 0.0 3.7e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family FAA_hydrolase PF01557.18 AID28707.1 - 2e-07 30.9 0.0 3.3e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Aldose_epim PF01263.20 AID28708.1 - 2.3e-42 145.3 0.0 2.6e-42 145.2 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase adh_short_C2 PF13561.6 AID28709.1 - 3.2e-55 187.3 0.0 3.7e-55 187.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28709.1 - 3.2e-47 160.5 0.1 3.9e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28709.1 - 5e-11 42.8 0.1 7.5e-11 42.3 0.1 1.3 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID28709.1 - 0.00012 21.6 0.1 0.00025 20.6 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family ApbA PF02558.16 AID28709.1 - 0.014 15.1 0.5 0.036 13.7 0.4 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA RmlD_sub_bind PF04321.17 AID28709.1 - 0.022 13.9 0.5 0.04 13.0 0.5 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain 3HCDH_N PF02737.18 AID28709.1 - 0.053 13.4 0.2 0.19 11.6 0.2 1.9 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Urocanase PF01175.18 AID28709.1 - 0.059 13.0 0.2 0.11 12.2 0.2 1.4 1 0 0 1 1 1 0 Urocanase Rossmann-like domain ABC_tran PF00005.27 AID28710.1 - 1.4e-31 109.9 0.0 1.8e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28710.1 - 3.7e-09 36.8 0.1 0.00086 19.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID28710.1 - 0.00048 19.8 0.1 0.00092 18.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Dynamin_N PF00350.23 AID28710.1 - 0.00066 19.8 0.0 0.00074 19.6 0.0 1.2 1 0 0 1 1 1 1 Dynamin family RsgA_GTPase PF03193.16 AID28710.1 - 0.0018 18.2 0.1 0.0037 17.2 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID28710.1 - 0.0028 18.2 0.0 0.0039 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID28710.1 - 0.0037 16.7 0.1 0.24 10.8 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 AID28710.1 - 0.012 15.6 0.0 0.024 14.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase ABC_ATPase PF09818.9 AID28710.1 - 0.043 12.6 0.4 3.3 6.4 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_15 PF13175.6 AID28710.1 - 0.091 12.4 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AID28710.1 - 0.098 12.4 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 AID28710.1 - 0.11 11.8 0.1 16 4.8 0.0 2.5 3 0 0 3 3 3 0 Bacterial TniB protein Zeta_toxin PF06414.12 AID28710.1 - 0.16 11.2 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin BPD_transp_2 PF02653.16 AID28711.1 - 4.7e-46 157.1 34.7 4.7e-46 157.1 34.7 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Bacteriocin_IIc PF10439.9 AID28711.1 - 2.9 8.1 14.7 21 5.3 8.7 2.9 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide Peripla_BP_4 PF13407.6 AID28712.1 - 4.6e-42 144.4 0.8 6.2e-42 143.9 0.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 AID28712.1 - 3.8e-05 23.5 2.6 0.00028 20.6 0.5 2.1 2 0 0 2 2 2 2 Periplasmic binding protein MR_MLE_C PF13378.6 AID28713.1 - 1.1e-57 195.2 0.2 1.6e-57 194.6 0.2 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID28713.1 - 5.7e-16 58.8 0.0 1.2e-15 57.8 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF4129 PF13559.6 AID28713.1 - 0.096 13.0 1.2 0.22 11.8 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4129) FCD PF07729.12 AID28714.1 - 5.7e-24 84.9 9.0 1e-23 84.1 9.0 1.4 1 0 0 1 1 1 1 FCD domain FadR_C PF07840.12 AID28714.1 - 8.1e-05 22.6 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 FadR C-terminal domain GntR PF00392.21 AID28714.1 - 0.0026 17.4 0.7 0.007 16.0 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family SGL PF08450.12 AID28715.1 - 6.9e-70 235.4 0.5 8.1e-70 235.2 0.5 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF5074 PF16819.5 AID28715.1 - 0.056 13.5 0.0 1.3 9.1 0.0 2.6 3 1 0 3 3 3 0 Domain of unknown function (DUF5074) Toxin_21 PF08091.11 AID28715.1 - 2.6 8.1 6.0 0.25 11.3 1.0 1.8 2 0 0 2 2 2 0 Spider insecticidal peptide BPD_transp_1 PF00528.22 AID28716.1 - 5.4e-15 55.6 29.6 2.6e-13 50.1 29.6 2.1 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF3792 PF12670.7 AID28716.1 - 0.079 13.1 0.1 0.079 13.1 0.1 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3792) CytB6-F_Fe-S PF08802.10 AID28716.1 - 0.37 10.9 8.7 0.23 11.5 3.3 3.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit DUF2070 PF09843.9 AID28716.1 - 6.8 4.8 15.5 33 2.6 15.5 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) BPD_transp_1 PF00528.22 AID28717.1 - 8e-15 55.0 20.4 8e-15 55.0 20.4 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5534 PF17686.1 AID28717.1 - 0.0093 16.2 0.2 0.019 15.3 0.2 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5534) SBP_bac_8 PF13416.6 AID28718.1 - 1.6e-28 100.4 4.0 2.1e-28 99.9 4.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28718.1 - 4.4e-25 88.5 1.1 6.2e-25 88.0 1.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28718.1 - 6.1e-11 42.8 4.6 1.3e-10 41.8 4.6 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Cupin_2 PF07883.11 AID28719.1 - 5.3e-19 67.7 0.1 8e-19 67.1 0.1 1.3 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 AID28719.1 - 1.4e-11 44.2 0.3 2.2e-11 43.6 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID28719.1 - 5.1e-09 36.3 3.5 8.5e-09 35.6 3.5 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AID28719.1 - 2e-06 27.7 0.0 2.8e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 AID28719.1 - 7.5e-05 22.6 0.0 0.00012 22.0 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 AID28719.1 - 8.5e-05 22.2 0.1 0.00013 21.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 AID28719.1 - 0.00019 21.0 0.0 0.00031 20.4 0.0 1.2 1 0 0 1 1 1 1 Cupin HTH_26 PF13443.6 AID28719.1 - 0.0036 17.7 0.0 0.0058 17.0 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 AID28719.1 - 0.0037 17.1 0.6 0.0068 16.2 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID28719.1 - 0.0058 16.1 0.8 0.0098 15.4 0.8 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 CENP-C_C PF11699.8 AID28719.1 - 0.022 15.0 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like TetR_N PF00440.23 AID28719.1 - 0.076 12.8 0.1 0.28 11.0 0.1 2.0 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_24 PF13412.6 AID28719.1 - 0.086 12.4 0.1 0.17 11.5 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Asp_Arg_Hydrox PF05118.15 AID28719.1 - 0.18 11.6 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase ABC_tran PF00005.27 AID28720.1 - 5.6e-34 117.6 0.0 8.6e-34 117.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28720.1 - 5.7e-08 32.8 0.4 1.8e-07 31.2 0.4 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID28720.1 - 5.9e-05 23.0 0.3 0.011 15.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 AID28720.1 - 0.002 18.9 0.0 0.0063 17.3 0.0 1.9 1 0 0 1 1 1 1 MalK OB fold domain TOBE PF03459.17 AID28720.1 - 0.0041 17.4 0.6 0.011 16.0 0.2 2.0 3 0 0 3 3 1 1 TOBE domain AAA PF00004.29 AID28720.1 - 0.0058 17.1 0.4 0.061 13.7 0.4 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID28720.1 - 0.011 15.9 1.1 0.095 13.0 0.1 2.1 2 0 0 2 2 2 0 AAA domain CysA_C_terminal PF17850.1 AID28720.1 - 0.015 15.9 0.5 0.048 14.2 0.1 2.2 2 0 0 2 2 2 0 CysA C-terminal regulatory domain AAA_16 PF13191.6 AID28720.1 - 0.019 15.4 0.7 0.066 13.6 0.6 2.0 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 AID28720.1 - 0.019 14.9 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_25 PF13481.6 AID28720.1 - 0.026 14.1 0.0 0.4 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 AID28720.1 - 0.063 13.5 0.1 0.89 9.8 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PhoH PF02562.16 AID28720.1 - 0.15 11.5 0.1 16 4.9 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein TniB PF05621.11 AID28720.1 - 0.16 11.4 0.1 0.92 8.9 0.1 1.9 2 0 0 2 2 2 0 Bacterial TniB protein SRAP PF02586.14 AID28722.1 - 6.2e-24 84.8 0.1 7.5e-24 84.5 0.1 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) SnoaL_2 PF12680.7 AID28723.1 - 1.9e-13 50.9 0.1 2.1e-13 50.8 0.1 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 AID28723.1 - 5.5e-09 35.9 0.1 6.9e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Ribosomal_L35Ae PF01247.18 AID28723.1 - 0.071 13.3 0.0 0.15 12.3 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein L35Ae ArsC PF03960.15 AID28724.1 - 4e-18 65.2 0.0 4.1e-18 65.2 0.0 1.1 1 0 0 1 1 1 1 ArsC family AHSA1 PF08327.11 AID28725.1 - 0.0043 17.3 0.0 0.0043 17.3 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein AAA_24 PF13479.6 AID28725.1 - 0.089 12.5 0.0 0.089 12.5 0.0 1.0 1 0 0 1 1 1 0 AAA domain DUF488 PF04343.13 AID28726.1 - 5.9e-33 114.0 0.1 6.6e-33 113.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF488 DHOase PF12890.7 AID28726.1 - 0.061 13.2 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Dihydro-orotase-like Peptidase_M29 PF02073.15 AID28727.1 - 1.7e-162 540.8 0.0 2.1e-162 540.6 0.0 1.0 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) LysR_substrate PF03466.20 AID28728.1 - 6.6e-30 104.0 0.3 9.3e-30 103.6 0.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28728.1 - 3.2e-18 65.4 3.1 7.6e-18 64.2 3.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 AID28728.1 - 0.018 14.8 0.5 0.93 9.4 0.1 2.9 3 1 1 4 4 4 0 Homeodomain-like domain P22_Cro PF14549.6 AID28728.1 - 0.031 14.1 0.1 0.076 12.9 0.1 1.7 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Sigma70_r4_2 PF08281.12 AID28728.1 - 0.1 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_30 PF13556.6 AID28728.1 - 0.11 12.3 0.0 0.29 11.0 0.0 1.8 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain UPF0122 PF04297.14 AID28728.1 - 0.14 12.4 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF1127 PF06568.11 AID28729.1 - 0.14 12.0 0.2 6.6 6.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1127) MFS_4 PF06779.14 AID28730.1 - 8.2e-132 439.9 52.2 9.4e-132 439.7 52.2 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 AID28730.1 - 1.1e-22 80.5 66.3 8.3e-20 71.0 49.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily PhoLip_ATPase_C PF16212.5 AID28730.1 - 0.18 11.6 4.0 0.35 10.6 4.0 1.5 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal SbmA_BacA PF05992.12 AID28731.1 - 8.6e-159 528.0 9.4 1.4e-158 527.4 9.4 1.3 1 0 0 1 1 1 1 SbmA/BacA-like family ABC_membrane_2 PF06472.15 AID28731.1 - 2.1e-14 53.6 6.0 1e-13 51.3 6.0 2.1 1 1 0 1 1 1 1 ABC transporter transmembrane region 2 RgpF PF05045.12 AID28731.1 - 0.058 12.2 0.2 0.079 11.7 0.2 1.2 1 0 0 1 1 1 0 Rhamnan synthesis protein F Polysacc_deac_1 PF01522.21 AID28732.1 - 5.4e-06 26.3 0.3 0.00035 20.5 0.1 3.0 2 1 0 2 2 2 1 Polysaccharide deacetylase TPR_21 PF09976.9 AID28733.1 - 8e-17 61.6 4.3 9.7e-17 61.3 4.3 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain UPF0253 PF06786.12 AID28733.1 - 3.9e-07 30.3 0.2 0.0043 17.3 0.1 2.7 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0253) TPR_16 PF13432.6 AID28733.1 - 3e-05 24.6 11.5 0.019 15.6 0.9 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat UPF0147 PF03685.13 AID28733.1 - 0.00014 21.8 0.1 0.22 11.6 0.0 2.8 3 1 0 3 3 2 2 Uncharacterised protein family (UPF0147) Mu-like_Pro PF10123.9 AID28733.1 - 0.0085 15.7 0.9 0.011 15.3 0.9 1.1 1 0 0 1 1 1 1 Mu-like prophage I protein DUF3318 PF11780.8 AID28733.1 - 0.024 14.6 1.1 0.25 11.3 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3318) TPR_MalT PF17874.1 AID28733.1 - 0.036 13.5 1.6 0.43 9.9 0.1 2.4 1 1 0 2 2 2 0 MalT-like TPR region HemY_N PF07219.13 AID28733.1 - 0.036 14.2 8.9 0.043 14.0 1.0 2.8 1 1 2 3 3 3 0 HemY protein N-terminus DUF4381 PF14316.6 AID28733.1 - 0.042 14.1 2.4 0.4 10.9 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4381) TPR_2 PF07719.17 AID28733.1 - 0.042 14.0 6.3 0.38 11.0 0.1 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 AID28733.1 - 0.057 14.2 10.8 0.8 10.7 0.5 3.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 AID28733.1 - 0.081 12.8 1.4 4.1 7.4 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 AID28733.1 - 0.085 13.2 2.1 1.8 8.9 0.1 3.2 3 1 0 4 4 4 0 Tetratricopeptide repeat PPR PF01535.20 AID28733.1 - 0.098 13.0 0.0 14 6.2 0.0 2.7 2 0 0 2 2 2 0 PPR repeat TPR_6 PF13174.6 AID28733.1 - 0.59 10.9 9.0 13 6.7 0.2 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat 4HB_MCP_1 PF12729.7 AID28733.1 - 2.9 7.4 4.2 14 5.2 0.1 2.9 2 1 1 3 3 3 0 Four helix bundle sensory module for signal transduction MMR_HSR1 PF01926.23 AID28734.1 - 7e-49 164.7 0.0 3.6e-25 88.3 0.0 2.4 2 0 0 2 2 2 2 50S ribosome-binding GTPase KH_dom-like PF14714.6 AID28734.1 - 1.6e-32 111.6 0.0 2.7e-32 110.9 0.0 1.4 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FeoB_N PF02421.18 AID28734.1 - 8.3e-25 87.1 0.0 3e-11 43.1 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 AID28734.1 - 4.6e-18 65.5 0.0 4.6e-08 32.8 0.0 5.5 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 AID28734.1 - 2.7e-14 53.6 0.0 7.6e-06 26.1 0.0 4.3 2 2 2 4 4 4 2 Dynamin family AIG1 PF04548.16 AID28734.1 - 3.7e-11 42.7 0.0 8.1e-07 28.6 0.0 2.6 2 1 1 3 3 3 2 AIG1 family Ras PF00071.22 AID28734.1 - 1.7e-10 40.8 0.0 6.1e-06 25.9 0.0 2.8 2 1 0 2 2 2 2 Ras family RsgA_GTPase PF03193.16 AID28734.1 - 1.7e-10 41.0 0.0 0.085 12.8 0.0 3.6 4 0 0 4 4 3 3 RsgA GTPase Roc PF08477.13 AID28734.1 - 6.8e-10 39.2 0.0 0.00016 21.9 0.0 2.9 2 1 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 AID28734.1 - 5.7e-08 32.4 0.0 0.0003 20.3 0.0 3.2 3 1 0 3 3 2 2 ADP-ribosylation factor family ABC_tran PF00005.27 AID28734.1 - 1.4e-06 28.8 0.0 0.008 16.7 0.0 2.5 2 1 0 2 2 2 2 ABC transporter MeaB PF03308.16 AID28734.1 - 2.9e-06 26.4 0.6 0.63 9.0 0.0 4.0 4 0 0 4 4 4 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 AID28734.1 - 0.00011 22.0 0.0 0.54 9.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 AID28734.1 - 0.00011 22.8 0.0 1.3 9.6 0.0 3.1 3 1 0 3 3 3 2 AAA domain Septin PF00735.18 AID28734.1 - 0.00023 20.6 0.0 0.26 10.5 0.0 2.5 2 1 0 2 2 2 2 Septin cobW PF02492.19 AID28734.1 - 0.00048 19.8 0.4 0.28 10.7 0.0 3.3 3 1 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 AID28734.1 - 0.0005 19.8 0.0 0.28 10.9 0.0 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_28 PF13521.6 AID28734.1 - 0.0018 18.5 0.0 3.1 8.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.18 AID28734.1 - 0.0029 17.0 0.0 0.12 11.7 0.0 2.6 3 0 0 3 3 2 1 FtsK/SpoIIIE family PduV-EutP PF10662.9 AID28734.1 - 0.0087 15.8 0.0 8.9 6.0 0.0 3.6 3 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 AID28734.1 - 0.0088 15.5 0.0 4.4 6.7 0.0 2.3 2 0 0 2 2 2 2 Signal recognition particle receptor beta subunit MMR_HSR1_Xtn PF16897.5 AID28734.1 - 0.01 15.8 0.0 0.35 10.9 0.0 2.5 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain AAA_22 PF13401.6 AID28734.1 - 0.011 16.0 0.0 7 6.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 AID28734.1 - 0.014 15.3 0.0 4.5 7.2 0.0 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B TniB PF05621.11 AID28734.1 - 0.015 14.7 0.0 6.4 6.1 0.0 2.8 3 0 0 3 3 3 0 Bacterial TniB protein RNA_helicase PF00910.22 AID28734.1 - 0.018 15.4 0.0 10 6.5 0.0 2.4 2 0 0 2 2 2 0 RNA helicase NTPase_1 PF03266.15 AID28734.1 - 0.02 14.8 0.1 4.7 7.1 0.0 2.5 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 AID28734.1 - 0.029 14.5 0.0 34 4.6 0.0 3.3 3 0 0 3 3 3 0 AAA domain IIGP PF05049.13 AID28734.1 - 0.038 13.0 0.1 0.25 10.4 0.0 2.2 3 0 0 3 3 3 0 Interferon-inducible GTPase (IIGP) ATPase_2 PF01637.18 AID28734.1 - 0.078 12.9 0.0 9.3 6.1 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea ATP_bind_1 PF03029.17 AID28734.1 - 0.12 12.2 0.0 33 4.1 0.0 3.4 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Ploopntkinase3 PF18751.1 AID28734.1 - 0.13 12.1 0.0 5.2 6.9 0.0 2.3 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 Zeta_toxin PF06414.12 AID28734.1 - 0.13 11.5 0.0 0.28 10.4 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin LysR_substrate PF03466.20 AID28735.1 - 3e-26 92.1 6.7 3.8e-26 91.8 6.7 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28735.1 - 6e-18 64.5 0.8 1.2e-17 63.6 0.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 AID28735.1 - 0.01 15.4 0.0 0.024 14.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID28735.1 - 0.016 15.1 0.0 0.035 14.0 0.0 1.6 1 0 0 1 1 1 0 HTH domain Anti-TRAP PF15777.5 AID28735.1 - 0.18 11.8 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein MFS_1 PF07690.16 AID28736.1 - 1e-37 129.9 64.6 2.6e-35 122.0 46.2 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 AID28736.1 - 0.047 12.5 8.0 0.3 9.8 2.7 2.3 2 0 0 2 2 2 0 LacY proton/sugar symporter Hydrolase_2 PF07486.12 AID28737.1 - 2.3e-27 95.9 0.3 4.1e-27 95.1 0.3 1.4 1 0 0 1 1 1 1 Cell Wall Hydrolase ATPase_gene1 PF09527.10 AID28738.1 - 2.4e-16 59.6 6.3 3.3e-16 59.2 6.3 1.2 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter ATP-synt_A PF00119.20 AID28739.1 - 2e-57 194.5 31.5 2.5e-57 194.2 31.5 1.0 1 0 0 1 1 1 1 ATP synthase A chain ATP-synt_C PF00137.21 AID28740.1 - 2.3e-11 43.9 12.6 2.7e-11 43.6 12.6 1.1 1 0 0 1 1 1 1 ATP synthase subunit C ATP-synt_B PF00430.18 AID28741.1 - 6.7e-20 71.5 10.3 8.9e-20 71.1 10.3 1.2 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) YMF19 PF02326.15 AID28741.1 - 6.6e-09 36.4 0.0 9.4e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 Plant ATP synthase F0 Mt_ATP-synt_B PF05405.14 AID28741.1 - 6.5e-06 25.9 0.2 8.8e-06 25.4 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF4407 PF14362.6 AID28741.1 - 0.00012 21.5 0.6 0.00016 21.1 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Apolipoprotein PF01442.18 AID28741.1 - 0.0056 16.6 5.6 0.0074 16.2 5.6 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Glyco_hydro_3_C PF01915.22 AID28741.1 - 0.093 12.7 1.5 0.11 12.5 1.5 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain PIN_8 PF18476.1 AID28741.1 - 0.098 12.5 3.7 0.12 12.2 3.7 1.1 1 0 0 1 1 1 0 PIN like domain DUF2232 PF09991.9 AID28741.1 - 0.14 11.3 0.2 0.14 11.3 0.2 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2232) Macoilin PF09726.9 AID28741.1 - 0.37 9.3 4.7 0.46 9.0 4.7 1.1 1 0 0 1 1 1 0 Macoilin family UPF0242 PF06785.11 AID28741.1 - 1.3 9.1 4.7 1.3 9.1 2.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Herpes_UL25 PF01499.16 AID28741.1 - 1.3 7.4 5.6 23 3.4 0.0 2.0 1 1 0 2 2 2 0 Herpesvirus UL25 family ISG65-75 PF11727.8 AID28741.1 - 5.7 6.1 13.6 0.55 9.4 6.2 2.0 1 1 1 2 2 2 0 Invariant surface glycoprotein ATP-synt_B PF00430.18 AID28742.1 - 9.9e-25 87.2 20.5 1.2e-24 86.9 20.5 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) Mt_ATP-synt_B PF05405.14 AID28742.1 - 1.1e-05 25.1 0.7 1.7e-05 24.5 0.5 1.3 1 1 0 1 1 1 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Seryl_tRNA_N PF02403.22 AID28742.1 - 2.3 8.5 14.7 0.81 9.9 7.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Macoilin PF09726.9 AID28742.1 - 2.6 6.5 9.6 3.1 6.2 9.6 1.2 1 0 0 1 1 1 0 Macoilin family DivIVA PF05103.13 AID28742.1 - 3.8 7.6 14.5 8.7 6.4 14.5 1.7 1 1 0 1 1 1 0 DivIVA protein RNase_HII PF01351.18 AID28743.1 - 1.2e-33 116.6 0.0 1.4e-33 116.4 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII Radical_SAM PF04055.21 AID28744.1 - 1.1e-16 61.6 0.1 2.2e-16 60.7 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily DUF4917 PF16263.5 AID28744.1 - 0.0036 16.7 0.0 0.0076 15.6 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4917) DUF1848 PF08902.11 AID28744.1 - 0.049 13.3 1.1 0.5 10.1 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1848) Glycos_transf_2 PF00535.26 AID28745.1 - 2.1e-06 27.6 0.0 9.4e-06 25.5 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID28745.1 - 0.00077 19.4 0.0 0.0051 16.7 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 MoCF_biosynth PF00994.24 AID28748.1 - 3.9e-39 133.6 0.1 4.8e-39 133.3 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain GHMP_kinases_C PF08544.13 AID28749.1 - 1e-09 38.6 0.0 2e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 AID28749.1 - 9.9e-07 28.9 0.9 2.2e-06 27.8 0.9 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain LEA_3 PF03242.13 AID28750.1 - 0.025 15.3 0.0 0.027 15.2 0.0 1.1 1 0 0 1 1 1 0 Late embryogenesis abundant protein ParE-like_toxin PF15781.5 AID28750.1 - 0.038 13.9 0.0 0.05 13.6 0.0 1.1 1 0 0 1 1 1 0 ParE-like toxin of type II bacterial toxin-antitoxin system OFeT_1 PF16955.5 AID28750.1 - 0.17 11.6 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter Peptidase_S49 PF01343.18 AID28751.1 - 8.3e-32 110.3 0.0 1.5e-31 109.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 AID28751.1 - 0.00011 21.3 0.0 0.00015 20.9 0.0 1.3 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 AID28751.1 - 0.018 14.9 0.1 0.037 13.9 0.1 1.5 2 0 0 2 2 2 0 Clp protease Pribosyltran PF00156.27 AID28751.1 - 0.054 13.0 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase domain MTS PF05175.14 AID28752.1 - 1.1e-11 44.5 0.0 1.3e-10 41.1 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 AID28752.1 - 2.1e-06 27.5 0.0 3e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 AID28752.1 - 6.1e-05 23.6 0.3 0.00013 22.6 0.3 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID28752.1 - 0.00083 20.0 0.1 0.0015 19.1 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID28752.1 - 0.0016 18.2 0.0 0.0024 17.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 AID28752.1 - 0.02 14.2 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase Methyltransf_12 PF08242.12 AID28752.1 - 0.073 13.8 0.0 0.16 12.7 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain DUF2007 PF09413.10 AID28753.1 - 8.2e-22 77.2 0.4 9.6e-22 76.9 0.4 1.1 1 0 0 1 1 1 1 Putative prokaryotic signal transducing protein polyprenyl_synt PF00348.17 AID28754.1 - 1.9e-68 230.3 0.1 2.2e-68 230.1 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase HEPPP_synt_1 PF07307.11 AID28754.1 - 0.19 11.3 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 FCD PF07729.12 AID28755.1 - 4.4e-23 82.0 11.4 4.4e-23 82.0 11.4 1.5 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID28755.1 - 3.6e-16 58.6 0.3 6.7e-16 57.7 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family DUF1266 PF06889.11 AID28755.1 - 0.0096 16.0 0.4 0.93 9.5 0.1 2.3 2 1 0 2 2 2 2 Protein of unknown function (DUF1266) Fe_dep_repress PF01325.19 AID28755.1 - 0.058 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain BioY PF02632.14 AID28756.1 - 1.7e-36 125.3 23.8 2.6e-36 124.7 23.8 1.3 1 0 0 1 1 1 1 BioY family DUF1284 PF06935.11 AID28757.1 - 1.5e-17 63.9 0.0 1.8e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) TPR_2 PF07719.17 AID28758.1 - 1.4e-29 99.8 26.9 1.4e-05 24.8 0.1 12.1 13 0 0 13 13 13 6 Tetratricopeptide repeat TPR_14 PF13428.6 AID28758.1 - 1.5e-27 93.9 27.9 4.6e-05 23.9 0.0 10.7 5 4 7 12 12 10 7 Tetratricopeptide repeat TPR_16 PF13432.6 AID28758.1 - 4.1e-24 84.9 32.4 8.6e-06 26.3 0.1 7.1 6 1 2 8 8 8 6 Tetratricopeptide repeat TPR_1 PF00515.28 AID28758.1 - 5.6e-22 76.6 15.4 7.2e-07 28.8 0.1 10.1 12 0 0 12 12 11 4 Tetratricopeptide repeat TPR_8 PF13181.6 AID28758.1 - 5.1e-21 73.1 14.0 0.0011 19.0 0.0 10.0 11 0 0 11 11 10 4 Tetratricopeptide repeat TPR_11 PF13414.6 AID28758.1 - 4.7e-19 67.8 14.9 4.4e-05 23.1 0.0 9.0 9 1 2 11 11 11 4 TPR repeat TPR_19 PF14559.6 AID28758.1 - 7.7e-19 68.0 26.1 0.00016 22.1 0.3 7.6 5 4 2 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 AID28758.1 - 1.1e-18 67.2 18.8 7.2e-05 23.0 0.6 9.9 9 3 0 9 9 9 4 Tetratricopeptide repeat TPR_7 PF13176.6 AID28758.1 - 7e-18 63.3 10.3 0.017 15.1 0.0 8.6 8 1 1 9 9 8 4 Tetratricopeptide repeat TPR_10 PF13374.6 AID28758.1 - 6.7e-11 41.7 13.3 0.0021 17.8 0.0 8.4 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_17 PF13431.6 AID28758.1 - 1.6e-10 40.6 4.4 0.31 11.5 0.0 7.9 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_6 PF13174.6 AID28758.1 - 4.1e-10 39.6 15.1 0.63 10.8 0.0 9.3 10 0 0 10 10 8 3 Tetratricopeptide repeat BTAD PF03704.17 AID28758.1 - 5.8e-10 39.8 2.8 0.01 16.3 0.0 4.5 3 1 1 4 4 4 3 Bacterial transcriptional activator domain TPR_15 PF13429.6 AID28758.1 - 2.9e-09 36.5 10.3 4.1e-05 22.9 1.1 4.0 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 AID28758.1 - 3.9e-09 36.5 15.3 0.0014 18.7 0.0 6.3 4 2 3 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 AID28758.1 - 3.8e-07 30.2 4.9 0.3 11.3 0.2 5.6 3 2 3 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 AID28758.1 - 0.00012 22.0 0.7 0.72 10.0 0.1 4.3 5 0 0 5 5 4 1 Fis1 C-terminal tetratricopeptide repeat TPR_21 PF09976.9 AID28758.1 - 0.0053 16.5 11.7 0.036 13.8 1.1 4.5 3 1 1 4 4 4 1 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 AID28758.1 - 0.03 14.9 0.1 0.03 14.9 0.1 7.0 8 0 0 8 8 4 0 Tetratricopeptide repeat NARP1 PF12569.8 AID28758.1 - 0.15 10.9 0.1 21 3.8 0.0 3.2 3 0 0 3 3 3 0 NMDA receptor-regulated protein 1 SHNi-TPR PF10516.9 AID28758.1 - 0.15 11.5 0.1 13 5.4 0.0 3.6 4 0 0 4 4 4 0 SHNi-TPR TPR_20 PF14561.6 AID28758.1 - 0.18 12.2 9.9 1.9 8.8 0.1 4.7 5 0 0 5 5 4 0 Tetratricopeptide repeat MIT PF04212.18 AID28758.1 - 1.4 9.0 8.9 53 4.0 0.2 4.7 5 0 0 5 5 5 0 MIT (microtubule interacting and transport) domain Acetyltransf_1 PF00583.25 AID28759.1 - 1e-12 48.3 0.1 1.3e-12 48.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID28759.1 - 1.3e-08 35.2 0.7 1.9e-08 34.6 0.1 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID28759.1 - 6.6e-08 32.5 0.0 9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID28759.1 - 0.0037 17.2 0.0 0.0063 16.5 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 AID28759.1 - 0.0069 16.5 0.0 0.011 15.7 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID28759.1 - 0.021 15.5 0.1 0.025 15.3 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID28759.1 - 0.025 14.7 0.0 0.048 13.8 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 AID28759.1 - 0.065 13.4 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain tRNA-synt_2e PF02091.15 AID28760.1 - 3.2e-145 482.6 0.0 3.6e-145 482.4 0.0 1.0 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit N-glycanase_C PF09113.10 AID28760.1 - 0.0023 17.7 0.4 0.0045 16.8 0.4 1.4 1 0 0 1 1 1 1 Peptide-N-glycosidase F, C terminal tRNA_synt_2f PF02092.17 AID28762.1 - 5e-195 649.4 0.0 7.7e-195 648.8 0.0 1.3 1 0 0 1 1 1 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 AID28762.1 - 2.6e-07 30.9 1.9 2.6e-07 30.9 1.9 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain Sua5_yciO_yrdC PF01300.18 AID28766.1 - 2.5e-46 157.4 0.0 3.1e-46 157.1 0.0 1.1 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 AID28766.1 - 1e-19 71.4 0.0 2.3e-19 70.3 0.0 1.6 1 1 0 1 1 1 1 Putative GTP-binding controlling metal-binding FAD-oxidase_C PF02913.19 AID28767.1 - 2.7e-60 204.1 0.0 4.3e-60 203.4 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 AID28767.1 - 1.6e-35 121.8 0.5 3.8e-35 120.6 0.5 1.6 1 0 0 1 1 1 1 FAD binding domain UbiA PF01040.18 AID28769.1 - 9.2e-55 185.7 18.3 9.2e-55 185.7 18.3 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family LysR_substrate PF03466.20 AID28770.1 - 1.7e-34 119.0 2.0 2.3e-34 118.6 2.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28770.1 - 6.4e-21 74.1 0.1 4.4e-20 71.4 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID28770.1 - 0.0017 18.2 0.2 0.0069 16.2 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_28 PF13518.6 AID28770.1 - 0.0071 16.4 0.0 0.033 14.3 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain NUMOD1 PF07453.13 AID28770.1 - 0.14 12.4 0.1 0.55 10.6 0.0 1.9 2 0 0 2 2 2 0 NUMOD1 domain PhyH PF05721.13 AID28771.1 - 3.6e-34 118.9 0.0 4.3e-34 118.6 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) GARS_A PF01071.19 AID28772.1 - 7e-77 257.6 0.1 8.1e-76 254.1 0.0 2.2 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 AID28772.1 - 1.1e-35 122.3 0.0 2.1e-35 121.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 AID28772.1 - 7.5e-29 99.9 2.0 8.4e-29 99.7 0.5 1.9 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 AID28772.1 - 2.4e-05 24.4 0.0 3.9e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AID28772.1 - 0.0002 21.0 0.2 0.0004 20.0 0.2 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 AID28772.1 - 0.00021 20.9 0.0 0.00039 20.0 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 AID28772.1 - 0.047 13.1 0.0 0.096 12.1 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain RimK PF08443.11 AID28772.1 - 0.13 11.9 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 RimK-like ATP-grasp domain LAL_C2 PF18603.1 AID28772.1 - 0.15 12.2 1.9 0.23 11.7 0.2 2.1 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 ATPgrasp_ST PF14397.6 AID28772.1 - 0.18 11.0 0.0 2 7.6 0.0 2.2 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Glyco_hydro_25 PF01183.20 AID28773.1 - 9.7e-17 61.7 0.0 1.4e-15 57.9 0.0 2.0 2 0 0 2 2 2 1 Glycosyl hydrolases family 25 Acyl-CoA_dh_1 PF00441.24 AID28775.1 - 7.9e-26 91.1 5.6 7.9e-26 91.1 5.6 2.4 2 2 1 3 3 3 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID28775.1 - 1.8e-14 53.7 0.0 3.8e-14 52.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_C PF12806.7 AID28775.1 - 2e-14 53.8 2.5 2e-14 53.8 2.5 2.5 2 1 0 2 2 2 1 Acetyl-CoA dehydrogenase C-terminal like Acyl-CoA_dh_N PF02771.16 AID28775.1 - 2.9e-13 50.5 0.5 9.2e-13 48.9 0.5 1.9 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 AID28775.1 - 0.00015 22.1 6.2 0.00015 22.1 6.2 2.2 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, C-terminal domain AcylCoA_DH_N PF12418.8 AID28775.1 - 0.005 16.9 0.0 0.012 15.7 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase N terminal ECH_1 PF00378.20 AID28776.1 - 3.5e-42 144.5 0.0 3.9e-42 144.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID28776.1 - 1.6e-26 93.6 0.1 2e-26 93.3 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Putative_PNPOx PF01243.20 AID28777.1 - 8.7e-26 89.9 0.0 1.2e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase PNP_phzG_C PF10590.9 AID28777.1 - 9.1e-18 64.1 2.3 9.1e-18 64.1 2.3 1.6 2 0 0 2 2 2 1 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Pyridox_oxase_2 PF12766.7 AID28777.1 - 1.2e-09 38.7 0.0 1.9e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 AID28777.1 - 0.0012 18.5 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like 17kDa_Anti_2 PF16998.5 AID28778.1 - 4.3e-36 123.3 0.4 5.4e-36 123.0 0.4 1.1 1 0 0 1 1 1 1 17 kDa outer membrane surface antigen DUF2510 PF10708.9 AID28779.1 - 0.038 13.8 0.1 0.072 12.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) DnaJ_C PF01556.18 AID28780.1 - 5.4e-30 104.4 0.0 8.4e-30 103.8 0.0 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 AID28780.1 - 3.9e-23 81.4 1.7 6e-23 80.7 1.7 1.3 1 0 0 1 1 1 1 DnaJ domain adh_short_C2 PF13561.6 AID28781.1 - 4.4e-87 291.5 0.3 5e-87 291.3 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28781.1 - 8.4e-21 74.3 0.1 1.1e-20 73.9 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase His_Phos_1 PF00300.22 AID28782.1 - 3.2e-41 141.2 0.1 3.5e-41 141.0 0.1 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF1344 PF07076.11 AID28783.1 - 2.7e-27 94.5 2.0 3.2e-27 94.2 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1344) CusF_Ec PF11604.8 AID28783.1 - 0.0018 18.2 0.0 0.17 11.9 0.0 2.1 1 1 0 1 1 1 1 Copper binding periplasmic protein CusF DHBP_synthase PF00926.19 AID28784.1 - 4.2e-81 271.1 0.1 5.6e-81 270.7 0.1 1.2 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase GTP_cyclohydro2 PF00925.20 AID28784.1 - 2.7e-29 101.9 0.0 5.6e-29 100.8 0.0 1.5 1 0 0 1 1 1 1 GTP cyclohydrolase II PUA PF01472.20 AID28784.1 - 0.052 13.5 0.2 0.22 11.5 0.2 2.1 1 0 0 1 1 1 0 PUA domain Baculo_p33 PF05214.12 AID28784.1 - 0.21 11.3 0.0 0.39 10.4 0.0 1.3 1 0 0 1 1 1 0 Baculovirus P33 MFS_1 PF07690.16 AID28785.1 - 2.4e-19 69.5 53.8 5.5e-13 48.6 27.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily TetR_N PF00440.23 AID28786.1 - 4.1e-13 48.9 1.2 4.1e-13 48.9 1.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Hist_deacetyl PF00850.19 AID28788.1 - 1.9e-81 273.9 0.0 2.3e-81 273.6 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Exonuc_VII_S PF02609.16 AID28789.1 - 9.1e-20 70.5 0.8 1.1e-19 70.2 0.8 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit PhdYeFM_antitox PF02604.19 AID28789.1 - 0.015 15.0 0.1 0.14 12.0 0.0 2.0 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF1657 PF07870.11 AID28789.1 - 0.03 14.2 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) Cas_Cas02710 PF09670.10 AID28789.1 - 0.032 13.1 0.2 0.039 12.8 0.2 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) DUF2277 PF10041.9 AID28790.1 - 2.3e-38 130.4 0.5 2.7e-38 130.2 0.5 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2277) FUSC PF04632.12 AID28790.1 - 0.053 12.1 1.5 0.057 11.9 1.5 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Herpes_UL49_2 PF04823.12 AID28790.1 - 0.056 13.5 1.0 0.14 12.2 0.4 1.8 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein Pirin PF02678.16 AID28792.1 - 1e-33 115.6 0.0 2e-33 114.6 0.0 1.5 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 AID28792.1 - 2.6e-29 101.7 0.0 5.3e-29 100.6 0.0 1.5 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 AID28792.1 - 0.0087 15.7 0.0 5 6.9 0.0 2.4 2 0 0 2 2 2 2 Cupin domain DXP_synthase_N PF13292.6 AID28793.1 - 1.9e-118 394.6 0.0 3.1e-118 393.9 0.0 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 AID28793.1 - 8e-39 133.1 0.7 1.3e-38 132.4 0.2 1.6 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID28793.1 - 1.1e-30 106.1 0.0 2.3e-30 105.0 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transketolase_N PF00456.21 AID28793.1 - 1.3e-06 27.6 0.2 0.0077 15.2 0.0 3.1 3 0 0 3 3 3 3 Transketolase, thiamine diphosphate binding domain E1_dh PF00676.20 AID28793.1 - 2.7e-06 26.5 0.2 6.2e-06 25.4 0.2 1.5 2 0 0 2 2 2 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 AID28793.1 - 0.00068 19.5 1.6 0.01 15.6 1.6 2.4 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 2CSK_N PF08521.10 AID28794.1 - 0.071 13.2 0.0 0.083 13.0 0.0 1.2 1 0 0 1 1 1 0 Two-component sensor kinase N-terminal GFA PF04828.14 AID28795.1 - 8.3e-05 22.8 0.1 8.3e-05 22.8 0.1 1.6 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme FtsJ PF01728.19 AID28796.1 - 2.3e-21 76.7 0.0 3.1e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase S4 PF01479.25 AID28796.1 - 5e-11 42.1 0.2 9e-11 41.3 0.2 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_25 PF13649.6 AID28796.1 - 0.068 13.9 0.0 0.12 13.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 AID28797.1 - 1.6e-09 37.2 0.0 4.3e-08 32.5 0.0 2.0 2 0 0 2 2 2 1 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 AID28797.1 - 0.01 15.4 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Cons_hypoth95 PF03602.15 AID28797.1 - 0.011 15.4 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 Met_10 PF02475.16 AID28797.1 - 0.044 13.5 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein Peptidase_C14 PF00656.22 AID28798.1 - 1.3e-23 84.3 0.0 2.3e-23 83.4 0.0 1.4 1 0 0 1 1 1 1 Caspase domain PsiF_repeat PF07769.14 AID28799.1 - 0.0033 17.3 4.8 0.0065 16.3 4.8 1.5 1 0 0 1 1 1 1 psiF repeat DUF3391 PF11871.8 AID28799.1 - 0.067 13.7 1.5 0.081 13.5 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) RXLR PF16810.5 AID28799.1 - 2.8 8.4 7.6 6.6 7.2 7.6 1.7 1 1 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity Peptidase_C93 PF06035.11 AID28800.1 - 5.8e-65 218.0 0.0 8.4e-65 217.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial transglutaminase-like cysteine proteinase BTLCP SIR2 PF02146.17 AID28801.1 - 3.4e-12 46.7 0.0 4e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Sir2 family PmbA_TldD PF01523.16 AID28802.1 - 1.6e-65 221.8 0.1 2.4e-65 221.2 0.1 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase IalB PF06776.12 AID28803.1 - 3.2e-36 124.3 0.0 3.8e-36 124.1 0.0 1.1 1 0 0 1 1 1 1 Invasion associated locus B (IalB) protein COX2 PF00116.20 AID28804.1 - 8.5e-45 151.5 0.0 1.5e-44 150.8 0.0 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 AID28804.1 - 1.5e-23 82.8 3.3 2.5e-23 82.0 3.3 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain AA_permease_2 PF13520.6 AID28804.1 - 0.056 12.3 2.1 0.082 11.7 2.1 1.2 1 0 0 1 1 1 0 Amino acid permease Sulf_transp PF04143.14 AID28804.1 - 0.19 11.3 1.5 0.27 10.8 1.5 1.2 1 0 0 1 1 1 0 Sulphur transport Adipogenin PF15202.6 AID28804.1 - 4 7.5 6.3 14 5.8 0.1 2.4 1 1 1 2 2 2 0 Adipogenin COX1 PF00115.20 AID28805.1 - 1.5e-152 508.4 64.9 1.8e-152 508.2 64.9 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I UbiA PF01040.18 AID28806.1 - 9.5e-60 202.0 30.4 9.5e-60 202.0 30.4 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family Orai-1 PF07856.12 AID28806.1 - 1.6 8.4 6.3 3.2 7.4 6.2 1.7 1 1 0 1 1 1 0 Mediator of CRAC channel activity DUF2116 PF09889.9 AID28807.1 - 0.0049 16.8 0.2 0.0058 16.6 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) SirB PF04247.12 AID28807.1 - 0.022 14.8 0.4 0.027 14.6 0.4 1.1 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB CtaG_Cox11 PF04442.14 AID28808.1 - 1.5e-55 187.4 0.2 1.9e-55 187.1 0.2 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 COX3 PF00510.18 AID28809.1 - 3.1e-86 289.4 25.1 3.8e-86 289.1 25.1 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III TIC20 PF16166.5 AID28809.1 - 0.0093 15.8 0.8 0.0093 15.8 0.8 2.3 3 0 0 3 3 3 1 Chloroplast import apparatus Tic20-like COX7B PF05392.11 AID28809.1 - 0.069 12.8 3.9 0.1 12.3 0.2 2.9 3 0 0 3 3 3 0 Cytochrome C oxidase chain VIIB DUF373 PF04123.13 AID28809.1 - 7.5 5.9 10.1 1.4 8.3 3.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF373) YkuD PF03734.14 AID28811.1 - 8.7e-18 65.1 0.0 1.1e-17 64.9 0.0 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain DUF983 PF06170.12 AID28812.1 - 8.4e-34 115.8 4.5 8.4e-34 115.8 4.5 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF983) Rubredoxin_2 PF18073.1 AID28812.1 - 0.028 14.1 3.5 0.36 10.6 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 AID28812.1 - 0.32 10.5 3.9 4.8 6.7 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 AID28812.1 - 0.37 10.7 2.7 11 6.0 0.4 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-RRN7 PF11781.8 AID28812.1 - 0.43 10.3 3.4 2.3 8.0 0.5 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 SURF1 PF02104.15 AID28813.1 - 1.5e-36 126.3 0.0 1.7e-36 126.1 0.0 1.0 1 0 0 1 1 1 1 SURF1 family LYTB PF02401.18 AID28814.1 - 2.9e-80 269.3 0.0 3.3e-80 269.1 0.0 1.0 1 0 0 1 1 1 1 LytB protein Ferrochelatase PF00762.19 AID28814.1 - 0.13 11.3 0.1 0.19 10.8 0.1 1.2 1 0 0 1 1 1 0 Ferrochelatase APH PF01636.23 AID28815.1 - 1.7e-38 132.9 0.0 2.5e-38 132.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 AID28815.1 - 0.0082 15.7 0.2 0.013 15.1 0.2 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase RNase_H PF00075.24 AID28816.1 - 1.4e-52 177.7 0.1 1.6e-52 177.5 0.1 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 AID28816.1 - 0.02 14.7 0.2 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Reverse transcriptase-like ParD_antitoxin PF03693.14 AID28817.1 - 7.6e-07 29.5 0.3 3.1e-06 27.5 0.1 1.9 2 0 0 2 2 2 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH His_Phos_1 PF00300.22 AID28817.1 - 0.00064 19.5 0.9 0.00064 19.5 0.9 1.8 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) DUF2938 PF11158.8 AID28818.1 - 4.3e-63 211.3 12.9 4.8e-63 211.1 12.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2938) NEMP PF10225.9 AID28818.1 - 0.31 10.7 1.4 0.55 9.9 1.4 1.4 1 0 0 1 1 1 0 NEMP family Redoxin PF08534.10 AID28819.1 - 3.2e-39 134.0 0.0 3.5e-39 133.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 AID28819.1 - 1.1e-11 44.7 0.0 1.3e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family DsbC PF11412.8 AID28820.1 - 1.6e-18 66.9 0.0 3e-18 66.0 0.0 1.4 1 0 0 1 1 1 1 Disulphide bond corrector protein DsbC DUF179 PF02622.15 AID28821.1 - 1.2e-46 158.6 0.0 1.5e-46 158.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 EAL PF00563.20 AID28822.1 - 2.3e-71 240.1 0.0 3.4e-71 239.5 0.0 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID28822.1 - 4.7e-35 120.7 0.1 7.5e-35 120.1 0.1 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID28822.1 - 6.9e-13 48.7 0.0 2e-12 47.2 0.0 1.8 1 0 0 1 1 1 1 PAS fold 7TMR-DISM_7TM PF07695.11 AID28822.1 - 4.2e-07 30.1 24.1 7.6e-07 29.2 24.1 1.4 1 0 0 1 1 1 1 7TM diverse intracellular signalling PAS_4 PF08448.10 AID28822.1 - 1.1e-05 25.6 0.6 3.8e-05 23.9 0.1 2.1 2 0 0 2 2 2 1 PAS fold 7TMR-DISMED2 PF07696.11 AID28822.1 - 6.3e-05 23.0 0.0 0.00012 22.1 0.0 1.5 1 0 0 1 1 1 1 7TMR-DISM extracellular 2 PAS PF00989.25 AID28822.1 - 0.00072 19.5 0.0 0.0049 16.9 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 AID28822.1 - 0.0013 19.0 0.0 0.0028 17.9 0.0 1.6 1 0 0 1 1 1 1 PAS domain Acetyltransf_3 PF13302.7 AID28823.1 - 2.6e-21 76.7 0.0 3.4e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID28823.1 - 4.5e-09 36.6 0.1 6.2e-09 36.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 AID28823.1 - 5.5e-09 36.4 0.0 6e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 AID28823.1 - 9.6e-06 25.3 0.0 1.5e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Peptidase_M16 PF00675.20 AID28824.1 - 4.8e-44 150.0 0.1 1.4e-43 148.5 0.0 1.8 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 AID28824.1 - 4.4e-39 134.4 0.0 1.4e-38 132.7 0.0 1.8 2 0 0 2 2 2 1 Peptidase M16 inactive domain Thr_synth_N PF14821.6 AID28825.1 - 1.3e-25 89.4 0.0 5.2e-25 87.5 0.0 2.0 2 0 0 2 2 2 1 Threonine synthase N terminus PALP PF00291.25 AID28825.1 - 7.2e-17 61.7 1.2 4e-16 59.3 1.2 1.8 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HAD_2 PF13419.6 AID28827.1 - 1e-21 77.8 0.0 1.2e-21 77.6 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID28827.1 - 5.3e-11 43.2 0.2 2.4e-09 37.8 0.2 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID28827.1 - 4.1e-09 36.4 0.1 7.8e-09 35.5 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 AID28827.1 - 0.036 14.2 0.0 0.42 10.7 0.1 2.6 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ADH_zinc_N PF00107.26 AID28827.1 - 0.05 13.6 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase N6_N4_Mtase PF01555.18 AID28828.1 - 1.9e-56 191.3 0.0 2.5e-56 191.0 0.0 1.1 1 0 0 1 1 1 1 DNA methylase RAMA PF18755.1 AID28828.1 - 1.4e-18 67.3 0.1 5.9e-18 65.3 0.0 1.9 2 0 0 2 2 2 1 Restriction Enzyme Adenine Methylase Associated Cons_hypoth95 PF03602.15 AID28828.1 - 0.00022 20.9 0.0 0.085 12.5 0.0 2.3 2 0 0 2 2 2 2 Conserved hypothetical protein 95 UPF0020 PF01170.18 AID28828.1 - 0.00036 20.3 0.0 0.21 11.2 0.0 2.7 3 0 0 3 3 3 2 Putative RNA methylase family UPF0020 N6_Mtase PF02384.16 AID28828.1 - 0.015 14.6 0.0 0.09 12.0 0.0 1.9 2 0 0 2 2 2 0 N-6 DNA Methylase Methyltransf_25 PF13649.6 AID28828.1 - 0.04 14.6 0.0 2 9.2 0.0 2.7 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 AID28828.1 - 0.088 13.5 0.0 47 4.7 0.0 3.3 3 0 0 3 3 3 0 Methyltransferase domain CedA PF10729.9 AID28828.1 - 0.11 12.4 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Cell division activator CedA SseB PF07179.12 AID28828.1 - 0.19 12.0 0.0 0.4 10.9 0.0 1.5 1 0 0 1 1 1 0 SseB protein N-terminal domain HAD_2 PF13419.6 AID28829.1 - 3.5e-10 40.3 0.0 4.4e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID28829.1 - 1.5e-07 31.4 0.0 2.7e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 AID28829.1 - 0.0029 17.9 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NUDIX_4 PF14815.6 AID28830.1 - 2.6e-23 82.1 0.2 5e-23 81.2 0.2 1.5 1 0 0 1 1 1 1 NUDIX domain HhH-GPD PF00730.25 AID28830.1 - 1.5e-19 70.4 0.0 2.8e-19 69.6 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 AID28830.1 - 0.00093 19.5 8.8 0.0018 18.6 8.8 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH PF00633.23 AID28830.1 - 0.0053 16.6 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif DciA PF05258.12 AID28831.1 - 6.1e-19 68.2 0.0 8.4e-19 67.8 0.0 1.2 1 0 0 1 1 1 1 Dna[CI] antecedent, DciA Thioredoxin_4 PF13462.6 AID28832.1 - 1.2e-43 149.1 0.1 1.7e-43 148.7 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 AID28832.1 - 1.8e-09 37.6 0.1 2.8e-05 24.0 0.0 2.2 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 AID28832.1 - 1.6e-06 28.5 0.2 4.5e-06 27.1 0.2 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain TAT_signal PF10518.9 AID28832.1 - 0.0011 18.7 0.6 0.0023 17.7 0.6 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Thioredoxin_3 PF13192.6 AID28832.1 - 0.0035 17.4 0.0 0.065 13.3 0.0 2.3 2 0 0 2 2 2 1 Thioredoxin domain Thioredoxin PF00085.20 AID28832.1 - 0.0093 15.9 0.1 1.2 9.2 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_12 PF18400.1 AID28832.1 - 0.043 13.6 0.0 2.4 8.0 0.0 2.2 1 1 1 2 2 2 0 Thioredoxin-like domain PepSY_like PF11396.8 AID28832.1 - 0.17 12.5 0.0 0.5 10.9 0.0 1.7 2 0 0 2 2 2 0 Putative beta-lactamase-inhibitor-like, PepSY-like SMC_N PF02463.19 AID28833.1 - 4.4e-59 199.6 0.0 6.6e-59 199.0 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID28833.1 - 5.1e-17 63.0 0.0 5.1e-17 63.0 0.0 5.1 3 2 1 4 4 4 1 AAA domain AAA_21 PF13304.6 AID28833.1 - 9.7e-15 55.1 0.2 1.5e-06 28.3 0.0 2.7 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AID28833.1 - 2.2e-08 34.3 0.0 5.5e-06 26.3 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain ABC_tran PF00005.27 AID28833.1 - 1.9e-05 25.2 1.4 0.015 15.8 0.0 4.0 3 2 0 3 3 3 1 ABC transporter SMC_hinge PF06470.13 AID28833.1 - 0.0015 18.8 0.1 0.15 12.4 0.0 3.8 3 1 1 4 4 4 1 SMC proteins Flexible Hinge Domain AAA PF00004.29 AID28833.1 - 0.0063 16.9 0.3 1.1 9.7 0.0 3.4 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID28833.1 - 0.0069 16.1 0.1 0.019 14.7 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain Nsp1_C PF05064.13 AID28833.1 - 0.39 10.5 22.1 1.6 8.6 0.4 5.6 5 0 0 5 5 5 0 Nsp1-like C-terminal region Tugs PF17840.1 AID28833.1 - 1.2 9.4 5.3 2.1 8.6 0.1 3.8 3 0 0 3 3 3 0 Tethering Ubl4a to BAGS domain VanZ PF04892.12 AID28834.1 - 0.00082 20.0 2.7 0.0013 19.4 2.7 1.3 1 1 0 1 1 1 1 VanZ like family PNTB_4TM PF12769.7 AID28834.1 - 0.046 14.2 0.0 0.046 14.2 0.0 2.3 3 0 0 3 3 3 0 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF4231 PF14015.6 AID28834.1 - 0.61 10.6 2.2 18 5.9 2.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Glyoxalase_6 PF18029.1 AID28835.1 - 0.00021 22.1 0.2 0.00059 20.6 0.2 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain PEP-utilizers_C PF02896.18 AID28836.1 - 2.3e-88 296.1 0.1 3.7e-88 295.5 0.1 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 AID28836.1 - 3.8e-65 220.3 0.0 6.2e-60 203.2 0.0 3.2 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 AID28836.1 - 4.6e-28 96.7 1.0 1.3e-27 95.3 1.0 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_1 PF01522.21 AID28837.1 - 1.5e-19 70.1 0.0 2.2e-19 69.5 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase NTP_transf_9 PF04248.12 AID28838.1 - 3.7e-28 97.2 0.1 4.4e-28 97.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF427) AMP-binding PF00501.28 AID28840.1 - 7.1e-88 295.0 0.2 8.2e-88 294.8 0.2 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID28840.1 - 2.5e-17 63.6 0.1 6.2e-17 62.4 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF1499 PF07386.11 AID28841.1 - 4.3e-22 78.9 0.1 5.7e-22 78.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) DUF4131 PF13567.6 AID28841.1 - 0.0045 16.7 0.6 0.0081 15.8 0.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) SepF PF04472.12 AID28841.1 - 0.027 14.7 0.1 0.05 13.9 0.1 1.4 1 0 0 1 1 1 0 Cell division protein SepF Lactamase_B PF00753.27 AID28842.1 - 2.9e-19 69.9 7.8 2.9e-19 69.9 7.8 1.5 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily BLACT_WH PF17778.1 AID28842.1 - 5.8e-11 42.2 0.0 1.1e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase associated winged helix domain Lactamase_B_2 PF12706.7 AID28842.1 - 0.074 12.6 1.9 0.14 11.6 1.0 1.8 1 1 1 2 2 2 0 Beta-lactamase superfamily domain BioY PF02632.14 AID28843.1 - 6e-40 136.4 16.7 6e-40 136.4 16.7 1.4 2 0 0 2 2 2 1 BioY family Epimerase PF01370.21 AID28844.1 - 2.6e-55 187.5 0.0 3e-55 187.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28844.1 - 4.6e-54 184.1 0.0 5.2e-54 183.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID28844.1 - 4.1e-16 58.8 0.0 5e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID28844.1 - 2.4e-15 56.4 0.0 3.2e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID28844.1 - 4e-13 49.2 0.0 1.3e-12 47.5 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID28844.1 - 4.7e-08 32.5 0.0 2.1e-07 30.4 0.0 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 AID28844.1 - 2.3e-05 24.3 0.0 0.00023 21.1 0.0 2.1 1 1 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 AID28844.1 - 0.00012 21.6 0.2 0.00032 20.2 0.0 1.8 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 AID28844.1 - 0.0043 17.0 0.1 0.0074 16.2 0.1 1.4 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 AID28844.1 - 0.018 14.6 0.0 0.037 13.6 0.0 1.5 1 1 0 1 1 1 0 NmrA-like family Ldh_1_N PF00056.23 AID28844.1 - 0.1 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain NTP_transferase PF00483.23 AID28845.1 - 2.2e-45 155.2 0.0 2.6e-45 154.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase dTDP_sugar_isom PF00908.17 AID28846.1 - 9.2e-69 230.4 0.0 1e-68 230.3 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GDP_Man_Dehyd PF16363.5 AID28847.1 - 3.8e-90 302.6 0.0 4.4e-90 302.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 AID28847.1 - 5.3e-66 222.5 0.0 6.3e-66 222.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 AID28847.1 - 7.4e-12 45.0 0.0 1.2e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 AID28847.1 - 1e-10 41.2 0.0 1.8e-10 40.4 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID28847.1 - 1.5e-10 40.5 0.0 3.3e-10 39.4 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 AID28847.1 - 3.3e-10 39.6 0.0 2e-08 33.8 0.0 2.6 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 AID28847.1 - 1.5e-07 31.0 0.0 0.0014 18.1 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 AID28847.1 - 0.00086 19.6 0.0 0.0014 18.9 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain KR PF08659.10 AID28847.1 - 0.021 14.7 0.0 0.064 13.2 0.0 1.7 2 0 0 2 2 2 0 KR domain NAD_binding_10 PF13460.6 AID28847.1 - 0.079 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding RmlD_sub_bind PF04321.17 AID28848.1 - 7.1e-105 350.2 0.5 8.4e-105 350.0 0.5 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 AID28848.1 - 1.8e-20 73.4 0.1 2.6e-20 72.9 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28848.1 - 3.3e-13 49.7 0.0 5.2e-13 49.1 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 AID28848.1 - 2.8e-11 43.1 1.3 1.7e-10 40.5 0.5 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 AID28848.1 - 1.8e-08 33.7 0.0 2.3e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 AID28848.1 - 1.9e-06 27.3 0.4 5.3e-05 22.5 0.1 2.5 2 1 0 2 2 2 1 Male sterility protein B12-binding PF02310.19 AID28848.1 - 0.018 15.0 0.7 0.11 12.6 0.3 2.3 2 1 0 2 2 2 0 B12 binding domain Glycos_transf_2 PF00535.26 AID28850.1 - 1.3e-22 80.4 0.0 1.9e-22 79.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID28850.1 - 9.7e-05 22.4 0.0 0.00017 21.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Methyltransf_25 PF13649.6 AID28851.1 - 2.3e-10 41.0 0.0 3.5e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID28851.1 - 1.1e-09 38.3 0.0 1.5e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID28851.1 - 5.4e-09 36.6 0.0 9.5e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID28851.1 - 2.4e-08 33.9 0.0 2.9e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID28851.1 - 5.3e-08 33.5 0.0 9e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 AID28851.1 - 0.00032 20.4 0.0 0.0015 18.2 0.0 1.7 1 1 1 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 AID28851.1 - 0.074 13.0 0.2 0.12 12.4 0.2 1.4 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 AID28851.1 - 0.16 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 AID28851.1 - 0.22 10.9 0.0 0.29 10.5 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB LPG_synthase_TM PF03706.13 AID28852.1 - 1.4e-08 34.7 43.9 9.3e-08 32.0 43.9 1.9 1 1 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region GLTT PF01744.20 AID28852.1 - 0.47 10.3 5.9 8.7 6.2 0.2 2.9 2 0 0 2 2 2 0 GLTT repeat (6 copies) YfhO PF09586.10 AID28853.1 - 1.1e-09 37.1 12.7 7.6e-05 21.2 0.0 2.2 2 0 0 2 2 2 2 Bacterial membrane protein YfhO DUF4027 PF13219.6 AID28853.1 - 3 7.8 10.9 2.1 8.3 0.3 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF4027) DUF2631 PF10939.8 AID28853.1 - 3 7.7 5.0 23 4.9 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2631) Epimerase PF01370.21 AID28854.1 - 5.1e-36 124.4 0.0 2.6e-35 122.0 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28854.1 - 9.6e-34 117.3 0.0 1.3e-15 57.7 0.0 2.7 2 1 0 2 2 2 2 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID28854.1 - 1.4e-12 47.4 0.0 6.5e-07 28.7 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID28854.1 - 9.8e-12 44.6 0.0 1.5e-05 24.3 0.0 2.1 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID28854.1 - 2.7e-10 39.9 0.0 3.6e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 AID28854.1 - 5e-06 25.7 0.0 0.008 15.2 0.0 2.1 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Methyltransf_25 PF13649.6 AID28854.1 - 0.028 15.1 0.3 0.14 12.9 0.0 2.4 2 2 1 3 3 3 0 Methyltransferase domain RgpF PF05045.12 AID28855.1 - 3.9e-198 659.2 0.0 4.5e-198 659.0 0.0 1.0 1 0 0 1 1 1 1 Rhamnan synthesis protein F NKAP PF15692.5 AID28855.1 - 0.099 13.4 0.0 0.19 12.4 0.0 1.4 1 0 0 1 1 1 0 NF-kappa-B-activating protein RgpF PF05045.12 AID28856.1 - 3.7e-200 665.9 0.0 4.3e-200 665.7 0.0 1.0 1 0 0 1 1 1 1 Rhamnan synthesis protein F RgpF PF05045.12 AID28857.1 - 5.4e-193 642.3 0.0 6.2e-193 642.1 0.0 1.0 1 0 0 1 1 1 1 Rhamnan synthesis protein F UPF0242 PF06785.11 AID28858.1 - 0.013 15.6 0.5 0.019 15.1 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 AID28858.1 - 0.016 15.7 4.4 0.16 12.5 4.4 2.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Sulfotransfer_3 PF13469.6 AID28858.1 - 0.032 14.6 0.1 0.17 12.2 0.1 2.2 1 1 0 1 1 1 0 Sulfotransferase family DUF2353 PF09789.9 AID28858.1 - 0.12 11.7 3.1 0.2 11.0 3.1 1.3 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) HIP1_clath_bdg PF16515.5 AID28858.1 - 0.29 11.8 3.1 0.25 12.0 1.1 2.0 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ABC_tran PF00005.27 AID28859.1 - 4.8e-22 78.9 0.0 1.2e-21 77.7 0.0 1.7 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28859.1 - 2.8e-06 27.4 0.3 2.7e-05 24.1 0.6 2.2 2 1 1 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID28859.1 - 0.0044 17.5 0.3 0.01 16.4 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID28859.1 - 0.0083 15.9 0.1 0.017 14.8 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID28859.1 - 0.012 15.4 0.2 0.022 14.5 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 AID28859.1 - 0.012 15.5 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA PF00004.29 AID28859.1 - 0.023 15.1 0.5 0.22 12.0 0.5 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF3584 PF12128.8 AID28859.1 - 0.031 11.8 0.0 0.043 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_16 PF13191.6 AID28859.1 - 0.036 14.5 0.1 0.051 14.0 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 AID28859.1 - 0.036 13.8 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AID28859.1 - 0.045 13.7 0.1 0.074 12.9 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 AID28859.1 - 0.1 12.7 0.2 0.41 10.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 AID28859.1 - 0.1 12.2 0.1 1.4 8.6 0.1 2.1 2 0 0 2 2 2 0 Thymidylate kinase SMC_N PF02463.19 AID28859.1 - 0.11 11.9 0.1 2.5 7.5 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain cobW PF02492.19 AID28859.1 - 0.12 12.0 0.7 0.28 10.7 0.4 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 AID28859.1 - 0.12 12.3 0.2 0.41 10.7 0.1 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 AID28859.1 - 0.15 12.6 0.8 3.2 8.3 0.3 2.3 2 1 0 2 2 2 0 AAA domain ABC2_membrane PF01061.24 AID28860.1 - 1.4e-15 57.3 20.5 1.4e-15 57.3 20.5 1.5 2 0 0 2 2 2 1 ABC-2 type transporter DUF5335 PF17269.2 AID28860.1 - 0.25 11.2 0.0 0.36 10.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5335) ABC2_membrane_3 PF12698.7 AID28860.1 - 4.6 6.2 29.4 2.9 6.9 26.4 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein Glycos_transf_2 PF00535.26 AID28861.1 - 2.2e-14 53.6 0.0 3e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID28861.1 - 4.5e-08 33.3 0.0 5.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID28861.1 - 0.0056 17.2 0.6 0.011 16.2 0.1 1.8 2 1 0 2 2 2 1 Glycosyl transferase family 2 Med13_C PF06333.12 AID28861.1 - 0.048 12.9 0.0 0.072 12.3 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain PGM_PMM_I PF02878.16 AID28862.1 - 2.8e-23 82.1 0.1 2.7e-22 79.0 0.0 2.5 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 AID28862.1 - 1.6e-16 60.5 0.0 4.6e-16 59.0 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 AID28862.1 - 1.8e-10 41.4 0.0 5.8e-10 39.7 0.0 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 AID28862.1 - 2.1e-07 31.0 0.0 4.7e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Polysacc_synt_2 PF02719.15 AID28864.1 - 4.1e-102 341.3 0.1 5.2e-102 340.9 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 AID28864.1 - 5.2e-25 88.3 0.2 5e-24 85.1 0.1 2.4 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28864.1 - 2.7e-17 63.2 0.0 1.2e-16 61.0 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID28864.1 - 4.8e-14 52.1 0.0 1.5e-12 47.2 0.0 2.5 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 AID28864.1 - 1.9e-11 43.8 0.0 3e-10 39.9 0.1 2.5 2 0 0 2 2 2 1 short chain dehydrogenase 3Beta_HSD PF01073.19 AID28864.1 - 1.5e-10 40.6 0.0 2.5e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family KR PF08659.10 AID28864.1 - 2.5e-06 27.5 0.1 5.6e-06 26.4 0.1 1.5 1 0 0 1 1 1 1 KR domain NAD_binding_4 PF07993.12 AID28864.1 - 4.1e-05 22.9 0.9 0.00095 18.4 1.3 2.8 2 1 0 2 2 2 1 Male sterility protein adh_short_C2 PF13561.6 AID28864.1 - 5.2e-05 22.9 0.0 0.0002 21.0 0.0 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.6 AID28864.1 - 6.8e-05 22.8 0.5 0.00014 21.8 0.5 1.6 1 0 0 1 1 1 1 NAD(P)H-binding Oxidored_nitro PF00148.19 AID28864.1 - 0.06 12.1 0.0 0.13 11.0 0.0 1.5 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Bac_transf PF02397.16 AID28865.1 - 3.8e-52 176.6 0.0 4.5e-52 176.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial sugar transferase Epimerase PF01370.21 AID28866.1 - 6.2e-21 75.0 0.0 7.7e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 AID28866.1 - 2.5e-14 53.1 0.0 3.2e-14 52.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 AID28866.1 - 3.4e-09 36.9 0.5 4.3e-09 36.5 0.5 1.2 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 AID28866.1 - 1.9e-08 33.6 0.0 4.2e-08 32.5 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 AID28866.1 - 2.9e-06 26.6 0.2 0.0087 15.3 0.0 2.6 1 1 1 2 2 2 2 Male sterility protein GDP_Man_Dehyd PF16363.5 AID28866.1 - 2.2e-05 24.0 0.0 0.13 11.6 0.0 2.1 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase KR PF08659.10 AID28866.1 - 3.9e-05 23.6 1.4 0.25 11.2 0.1 2.4 1 1 1 2 2 2 2 KR domain adh_short PF00106.25 AID28866.1 - 0.0044 16.5 0.1 0.015 14.7 0.1 2.0 1 1 0 1 1 1 1 short chain dehydrogenase Ldh_1_N PF00056.23 AID28866.1 - 0.023 14.8 0.1 0.13 12.3 0.1 1.9 1 1 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain DapB_N PF01113.20 AID28866.1 - 0.035 14.2 0.0 0.067 13.3 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Polysacc_synt_2 PF02719.15 AID28866.1 - 0.1 11.7 0.0 0.73 8.9 0.0 2.1 2 1 0 2 2 2 0 Polysaccharide biosynthesis protein NmrA PF05368.13 AID28866.1 - 0.17 11.4 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Wzy_C PF04932.15 AID28867.1 - 3.6e-15 55.9 6.3 3.6e-15 55.9 6.3 3.7 2 2 0 3 3 3 1 O-Antigen ligase OSTMP1 PF09777.9 AID28868.1 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor PAPS_reduct PF01507.19 AID28869.1 - 6.6e-66 221.6 0.0 8e-66 221.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family APS_kinase PF01583.20 AID28870.1 - 3.7e-74 247.9 0.0 6.9e-74 247.0 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase GTP_EFTU PF00009.27 AID28870.1 - 7.8e-41 139.8 0.0 2.7e-40 138.0 0.0 1.7 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 AID28870.1 - 1.6e-07 31.4 0.7 5.1e-05 23.3 0.0 3.6 3 1 0 3 3 3 1 50S ribosome-binding GTPase AAA_33 PF13671.6 AID28870.1 - 3.6e-06 27.2 0.0 8.2e-05 22.8 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_18 PF13238.6 AID28870.1 - 5.6e-06 26.9 0.0 9.9e-05 22.9 0.0 2.7 3 0 0 3 3 3 1 AAA domain GTP_EFTU_D2 PF03144.25 AID28870.1 - 2.7e-05 24.5 0.5 7.1e-05 23.1 0.5 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 AAA_29 PF13555.6 AID28870.1 - 2.9e-05 23.7 0.2 0.0017 18.1 0.0 2.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID28870.1 - 4.3e-05 23.5 0.4 0.73 9.7 0.0 3.8 2 1 0 3 3 3 1 RsgA GTPase Zeta_toxin PF06414.12 AID28870.1 - 0.00079 18.8 0.0 0.0014 17.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin G-alpha PF00503.20 AID28870.1 - 0.0026 17.0 0.0 1.8 7.6 0.0 2.3 2 0 0 2 2 2 2 G-protein alpha subunit Roc PF08477.13 AID28870.1 - 0.0033 17.6 0.2 12 6.1 0.0 3.9 4 0 0 4 4 4 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 AID28870.1 - 0.0049 17.3 0.0 0.025 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain KTI12 PF08433.10 AID28870.1 - 0.0079 15.7 0.0 0.017 14.6 0.0 1.5 1 0 0 1 1 1 1 Chromatin associated protein KTI12 SWI2_SNF2 PF18766.1 AID28870.1 - 0.024 14.3 0.0 0.047 13.3 0.0 1.4 1 0 0 1 1 1 0 SWI2/SNF2 ATPase Torsin PF06309.11 AID28870.1 - 0.056 13.5 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Torsin ABC_tran PF00005.27 AID28870.1 - 0.056 13.9 0.0 0.35 11.4 0.0 2.2 2 0 0 2 2 2 0 ABC transporter RNA_helicase PF00910.22 AID28870.1 - 0.082 13.3 0.0 1.6 9.1 0.0 2.5 2 0 0 2 2 2 0 RNA helicase SRPRB PF09439.10 AID28870.1 - 0.17 11.3 0.1 14 5.1 0.0 3.0 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit Inositol_P PF00459.25 AID28871.1 - 4e-44 151.2 0.0 4.7e-44 150.9 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DegT_DnrJ_EryC1 PF01041.17 AID28872.1 - 9.3e-105 350.9 0.0 1.1e-104 350.7 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 AID28872.1 - 4.8e-12 45.7 0.0 9.7e-12 44.7 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 AID28872.1 - 0.016 14.5 0.0 0.043 13.1 0.0 1.7 1 1 0 1 1 1 0 Beta-eliminating lyase Aminotran_5 PF00266.19 AID28872.1 - 0.029 13.3 0.0 0.044 12.7 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V zf-CCHC_6 PF15288.6 AID28872.1 - 0.34 10.8 0.9 0.66 9.9 0.9 1.4 1 0 0 1 1 1 0 Zinc knuckle PfkB PF00294.24 AID28873.1 - 1.5e-44 152.5 0.0 1.7e-44 152.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RbsD_FucU PF05025.13 AID28874.1 - 1e-32 113.3 0.0 1.2e-32 113.1 0.0 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family ROK PF00480.20 AID28875.1 - 2e-19 70.2 0.0 7.8e-19 68.3 0.0 1.8 1 1 0 1 1 1 1 ROK family HTH_24 PF13412.6 AID28875.1 - 3.5e-10 39.3 0.1 6e-10 38.5 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID28875.1 - 3.9e-08 33.1 0.4 7.7e-08 32.1 0.4 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID28875.1 - 1.7e-06 27.9 0.3 3.8e-06 26.8 0.3 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 AID28875.1 - 2.5e-06 27.3 0.1 4.4e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID28875.1 - 4.2e-05 24.0 0.1 9.5e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID28875.1 - 0.0024 17.6 0.5 0.0052 16.6 0.5 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain DprA_WH PF17782.1 AID28875.1 - 0.0037 17.4 0.5 0.012 15.7 0.2 2.0 2 0 0 2 2 2 1 DprA winged helix domain HTH_5 PF01022.20 AID28875.1 - 0.0065 16.3 0.2 0.011 15.6 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 AID28875.1 - 0.012 15.5 0.1 0.022 14.6 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 AID28875.1 - 0.014 15.5 0.0 0.042 14.0 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1670 PF07900.11 AID28875.1 - 0.014 14.8 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) HTH_AsnC-type PF13404.6 AID28875.1 - 0.018 14.9 1.4 0.032 14.1 0.2 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain RepL PF05732.11 AID28875.1 - 0.019 14.4 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_23 PF13384.6 AID28875.1 - 0.02 14.7 0.0 0.049 13.4 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 AID28875.1 - 0.02 14.9 0.2 0.073 13.1 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn helix HTH_47 PF16221.5 AID28875.1 - 0.029 13.9 0.0 0.077 12.6 0.0 1.7 1 0 0 1 1 1 0 winged helix-turn-helix Rrf2 PF02082.20 AID28875.1 - 0.043 14.2 0.1 0.091 13.1 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_Tnp_ISL3 PF13542.6 AID28875.1 - 0.056 12.9 0.1 0.14 11.6 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 DUF977 PF06163.11 AID28875.1 - 0.09 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) RPA_C PF08784.11 AID28875.1 - 0.11 13.2 0.1 0.22 12.2 0.1 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HTH_20 PF12840.7 AID28875.1 - 0.12 12.4 0.8 0.21 11.7 0.2 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain Crp PF00325.20 AID28875.1 - 0.16 11.6 0.2 0.49 10.1 0.2 1.9 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_36 PF13730.6 AID28875.1 - 0.17 11.9 0.0 0.43 10.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_rep_O PF04492.13 AID28875.1 - 0.21 12.2 0.0 0.4 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage replication protein O Peripla_BP_4 PF13407.6 AID28876.1 - 7.6e-42 143.7 8.6 9.6e-42 143.3 8.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28876.1 - 1.9e-17 63.6 0.9 1.9e-11 43.9 0.1 2.1 2 0 0 2 2 2 2 Periplasmic binding proteins and sugar binding domain of LacI family DUF3798 PF12683.7 AID28876.1 - 0.00065 19.2 0.6 0.0011 18.4 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3798) BPD_transp_2 PF02653.16 AID28877.1 - 1.1e-46 159.2 40.4 1.1e-46 159.2 40.4 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28878.1 - 4.9e-31 108.1 0.0 6.2e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28878.1 - 1.6e-08 34.7 0.0 7.5e-05 22.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28878.1 - 7.2e-07 28.9 0.1 7.7e-06 25.5 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28878.1 - 5.7e-05 22.8 0.0 0.00011 21.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID28878.1 - 0.0007 20.1 0.0 0.0012 19.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID28878.1 - 0.0077 16.6 0.0 0.011 16.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain Dynamin_N PF00350.23 AID28878.1 - 0.01 15.9 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 0 Dynamin family RsgA_GTPase PF03193.16 AID28878.1 - 0.012 15.5 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase MukB PF04310.12 AID28878.1 - 0.013 15.3 0.1 0.067 13.0 0.0 1.9 2 0 0 2 2 2 0 MukB N-terminal MMR_HSR1 PF01926.23 AID28878.1 - 0.022 14.8 0.0 0.036 14.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 AID28878.1 - 0.025 14.3 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 AID28878.1 - 0.031 13.9 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID28878.1 - 0.038 14.2 0.1 0.62 10.3 0.0 2.5 2 2 1 3 3 3 0 AAA domain ABC_ATPase PF09818.9 AID28878.1 - 0.079 11.7 0.1 9.5 4.9 0.0 2.5 2 1 1 3 3 3 0 Predicted ATPase of the ABC class DUF815 PF05673.13 AID28878.1 - 0.095 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2813 PF11398.8 AID28878.1 - 0.25 10.6 0.0 0.36 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) Phosphorylase PF00343.20 AID28879.1 - 0 1038.7 0.0 0 1038.5 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase CBM_48 PF02922.18 AID28880.1 - 1.5e-27 95.7 0.0 2.7e-24 85.3 0.0 2.8 2 0 0 2 2 2 2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase_C PF02806.18 AID28880.1 - 1.1e-21 77.1 0.0 2.2e-21 76.1 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 AID28880.1 - 7.9e-11 42.1 0.0 1.7e-05 24.6 0.0 2.3 1 1 0 2 2 2 2 Alpha amylase, catalytic domain NTP_transferase PF00483.23 AID28881.1 - 1.4e-64 218.1 0.0 2e-64 217.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 AID28881.1 - 3.7e-08 33.9 0.0 7.2e-08 32.9 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 AID28881.1 - 0.063 13.0 0.3 2.9 7.7 0.0 2.5 1 1 1 2 2 2 0 Bacterial transferase hexapeptide (six repeats) 4HPAD_g_N PF18671.1 AID28881.1 - 0.083 12.6 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Glyco_transf_5 PF08323.11 AID28882.1 - 3.1e-69 233.4 0.0 2.7e-68 230.3 0.0 2.0 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 AID28882.1 - 6.9e-12 45.2 0.0 1.1e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 AID28882.1 - 2.9e-08 34.3 1.6 5.9e-08 33.3 0.2 2.2 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 AID28882.1 - 3e-07 31.0 0.3 8.2e-07 29.5 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID28882.1 - 5.1e-06 26.6 0.0 1.7e-05 24.9 0.0 2.1 2 1 0 2 2 2 1 Glycosyltransferase Family 4 PIGA PF08288.12 AID28882.1 - 0.069 13.8 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 PIGA (GPI anchor biosynthesis) PGM_PMM_I PF02878.16 AID28883.1 - 1.3e-35 122.1 0.2 2.1e-35 121.4 0.2 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 AID28883.1 - 2.8e-31 108.1 0.0 4.8e-31 107.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 AID28883.1 - 5.9e-14 52.5 0.0 1.5e-13 51.3 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 AID28883.1 - 3.8e-08 33.4 0.0 9.8e-08 32.1 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CBM_48 PF02922.18 AID28884.1 - 4.1e-10 39.9 0.0 7e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 AID28884.1 - 1.1e-09 38.3 0.0 1.1e-05 25.2 0.0 2.9 1 1 1 2 2 2 2 Alpha amylase, catalytic domain GlgX_C PF18390.1 AID28884.1 - 0.073 12.9 0.0 0.39 10.5 0.0 2.1 2 0 0 2 2 2 0 Glycogen debranching enzyme C-terminal domain Alpha-amylase PF00128.24 AID28886.1 - 1.5e-84 284.5 0.0 2.3e-84 283.9 0.0 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Malt_amylase_C PF16657.5 AID28886.1 - 2e-07 31.0 0.0 5.9e-07 29.5 0.0 1.8 2 0 0 2 2 2 1 Maltogenic Amylase, C-terminal domain DUF3459 PF11941.8 AID28886.1 - 2.8e-07 30.8 0.1 7.6e-07 29.4 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 AID28886.1 - 0.087 13.3 0.0 0.23 11.9 0.0 1.7 1 0 0 1 1 1 0 Alpha amylase, C-terminal all-beta domain Tad_C PF09977.9 AID28887.1 - 1.9e-09 38.6 10.3 1.9e-09 38.6 10.3 3.2 3 1 0 3 3 3 1 Putative Tad-like Flp pilus-assembly Tad PF13400.6 AID28887.1 - 0.00022 21.5 9.6 0.00022 21.5 9.6 3.3 3 0 0 3 3 3 1 Putative Flp pilus-assembly TadE/G-like Dicistro_VP4 PF11492.8 AID28887.1 - 6.8 6.7 11.0 0.59 10.1 2.3 3.7 3 1 0 3 3 3 0 Cricket paralysis virus, VP4 TadE PF07811.12 AID28888.1 - 3.9e-13 49.5 3.2 7e-13 48.6 3.2 1.4 1 0 0 1 1 1 1 TadE-like protein BCD PF15461.6 AID28888.1 - 0.0063 16.0 0.1 0.0076 15.8 0.1 1.2 1 0 0 1 1 1 1 Beta-carotene 15,15'-dioxygenase DUF4320 PF14208.6 AID28888.1 - 0.034 14.2 0.0 0.044 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) IcmF_C PF06744.12 AID28888.1 - 0.099 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Type VI secretion protein IcmF C-terminal SBP_bac_5 PF00496.22 AID28889.1 - 1.9e-86 290.4 10.4 2.4e-86 290.1 10.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle VIT1 PF01988.19 AID28889.1 - 0.16 11.8 0.2 0.86 9.4 0.0 2.0 2 0 0 2 2 2 0 VIT family BPD_transp_1 PF00528.22 AID28890.1 - 2.7e-40 138.1 14.7 2.7e-40 138.1 14.7 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component HCV_NS4a PF01006.20 AID28890.1 - 0.74 9.6 3.3 0.72 9.6 0.2 2.5 2 1 0 2 2 2 0 Hepatitis C virus non-structural protein NS4a BPD_transp_1 PF00528.22 AID28891.1 - 9.9e-26 90.6 17.3 1.8e-25 89.7 17.3 1.5 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID28891.1 - 4.6e-14 52.1 1.1 4.6e-14 52.1 1.1 3.0 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C DUF4731 PF15875.5 AID28891.1 - 2.6 8.3 4.5 0.47 10.7 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4731) ABC_tran PF00005.27 AID28892.1 - 2.4e-58 196.5 0.0 6.8e-29 101.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 AID28892.1 - 1.3e-15 57.4 0.1 1.9e-06 27.5 0.0 2.5 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID28892.1 - 5e-14 52.8 5.3 0.00015 21.7 0.0 4.0 2 2 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 AID28892.1 - 6.8e-13 48.9 0.0 9.1e-06 26.1 0.0 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.6 AID28892.1 - 5.5e-09 35.6 0.8 0.002 17.9 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 AID28892.1 - 1.3e-07 32.2 1.6 0.0013 19.1 0.1 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 AID28892.1 - 5e-07 30.1 2.7 0.0012 19.1 0.2 3.2 2 2 0 2 2 2 2 AAA domain AAA_7 PF12775.7 AID28892.1 - 5.8e-05 22.7 0.1 0.19 11.2 0.1 2.5 3 0 0 3 3 2 2 P-loop containing dynein motor region DUF87 PF01935.17 AID28892.1 - 5.8e-05 23.3 1.0 0.23 11.5 0.0 2.4 2 0 0 2 2 2 2 Helicase HerA, central domain AAA_5 PF07728.14 AID28892.1 - 6.7e-05 22.9 0.4 0.19 11.8 0.0 3.6 4 0 0 4 4 3 1 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 AID28892.1 - 7.7e-05 22.7 0.9 0.069 13.0 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 AID28892.1 - 0.00013 22.0 0.1 0.022 14.8 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase NACHT PF05729.12 AID28892.1 - 0.00021 21.3 0.3 0.92 9.4 0.0 2.6 2 0 0 2 2 2 2 NACHT domain AAA_33 PF13671.6 AID28892.1 - 0.00027 21.1 0.2 0.099 12.8 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 AID28892.1 - 0.00042 20.1 0.0 0.34 10.6 0.0 3.0 2 1 0 3 3 3 1 AAA ATPase domain AAA_25 PF13481.6 AID28892.1 - 0.0011 18.6 0.2 0.92 9.1 0.0 3.7 4 0 0 4 4 4 1 AAA domain AAA_18 PF13238.6 AID28892.1 - 0.0014 19.1 0.0 0.093 13.3 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_23 PF13476.6 AID28892.1 - 0.0017 18.9 0.0 0.22 12.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 AID28892.1 - 0.0017 17.8 2.1 3.9 6.8 0.0 4.1 4 0 0 4 4 4 0 Bacterial TniB protein PRK PF00485.18 AID28892.1 - 0.0021 17.8 0.1 0.67 9.7 0.0 2.4 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 AID28892.1 - 0.0022 17.4 0.5 1.8 7.9 0.0 2.7 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 AID28892.1 - 0.0024 18.2 0.0 2.5 8.5 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID28892.1 - 0.0026 17.5 2.4 1.1 8.9 0.2 2.9 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 AID28892.1 - 0.0029 17.3 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF3987 PF13148.6 AID28892.1 - 0.0032 16.5 0.3 0.88 8.5 0.1 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF3987) Sigma54_activat PF00158.26 AID28892.1 - 0.0043 16.8 1.5 0.76 9.5 0.0 2.7 3 0 0 3 3 2 1 Sigma-54 interaction domain IstB_IS21 PF01695.17 AID28892.1 - 0.0047 16.7 0.4 5.6 6.7 0.0 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 AID28892.1 - 0.0048 16.3 1.2 0.82 9.0 0.3 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family Cuticle_1 PF08140.11 AID28892.1 - 0.0065 16.5 0.0 29 4.8 0.0 3.7 3 0 0 3 3 3 0 Crustacean cuticle protein repeat MobB PF03205.14 AID28892.1 - 0.0076 16.2 0.3 0.94 9.4 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase PF06745.13 AID28892.1 - 0.0094 15.3 0.2 0.85 8.9 0.0 2.5 2 0 0 2 2 2 1 KaiC RNA_helicase PF00910.22 AID28892.1 - 0.011 16.1 0.0 7.5 7.0 0.0 2.5 2 0 0 2 2 2 0 RNA helicase SbcCD_C PF13558.6 AID28892.1 - 0.014 15.6 1.7 1 9.6 0.0 3.5 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit APS_kinase PF01583.20 AID28892.1 - 0.024 14.5 0.3 2.9 7.8 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_13 PF13166.6 AID28892.1 - 0.024 13.3 0.1 0.23 10.1 0.0 2.3 3 0 0 3 3 3 0 AAA domain T2SSE PF00437.20 AID28892.1 - 0.028 13.5 0.2 2.7 7.0 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein MeaB PF03308.16 AID28892.1 - 0.04 12.9 1.1 0.46 9.4 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TrwB_AAD_bind PF10412.9 AID28892.1 - 0.043 12.7 0.2 6.5 5.6 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DEAD PF00270.29 AID28892.1 - 0.047 13.4 0.4 1.3 8.8 0.4 2.8 1 1 0 1 1 1 0 DEAD/DEAH box helicase Roc PF08477.13 AID28892.1 - 0.049 13.9 0.3 8.7 6.6 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Myosin_head PF00063.21 AID28892.1 - 0.067 11.4 0.2 4.4 5.4 0.0 2.1 2 0 0 2 2 2 0 Myosin head (motor domain) DUF2813 PF11398.8 AID28892.1 - 0.069 12.4 0.0 0.51 9.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) NB-ARC PF00931.22 AID28892.1 - 0.079 12.1 0.4 2 7.6 0.0 2.4 2 0 0 2 2 2 0 NB-ARC domain ABC_ATPase PF09818.9 AID28892.1 - 0.089 11.6 4.3 1.5 7.5 0.1 3.8 3 2 0 3 3 3 0 Predicted ATPase of the ABC class ATP_bind_1 PF03029.17 AID28892.1 - 0.16 11.7 0.6 12 5.6 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF2666 PF10869.8 AID28892.1 - 0.18 12.0 0.0 20 5.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) IIGP PF05049.13 AID28892.1 - 0.2 10.6 0.5 7.6 5.5 0.2 2.1 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) CbiA PF01656.23 AID28892.1 - 0.23 11.5 3.1 20 5.2 0.2 3.3 2 2 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Abhydrolase_3 PF07859.13 AID28894.1 - 0.035 14.0 0.5 0.035 14.0 0.5 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Putative_PNPOx PF01243.20 AID28902.1 - 6.6e-05 23.0 0.0 0.0001 22.4 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 AID28902.1 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like NmrA PF05368.13 AID28903.1 - 2.5e-66 223.6 0.1 2.9e-66 223.4 0.1 1.0 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID28903.1 - 5.8e-19 68.7 3.2 7.9e-19 68.3 3.2 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID28903.1 - 1.3e-09 37.9 0.4 2e-09 37.2 0.4 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID28903.1 - 6.8e-06 25.7 0.0 9.5e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase adh_short PF00106.25 AID28903.1 - 0.0004 19.9 0.8 0.00077 19.0 0.8 1.4 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID28903.1 - 0.0012 18.8 0.8 0.0022 17.9 0.8 1.5 1 0 0 1 1 1 1 KR domain 3Beta_HSD PF01073.19 AID28903.1 - 0.0021 17.1 0.0 0.0041 16.2 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID28903.1 - 0.0036 16.4 0.5 0.0074 15.4 0.1 1.7 2 0 0 2 2 2 1 RmlD substrate binding domain TrkA_N PF02254.18 AID28903.1 - 0.021 15.1 0.3 0.035 14.4 0.3 1.6 1 1 0 1 1 1 0 TrkA-N domain F420_oxidored PF03807.17 AID28903.1 - 0.022 15.4 0.2 0.054 14.1 0.2 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Mur_ligase PF01225.25 AID28903.1 - 0.043 14.1 1.1 0.13 12.6 1.1 2.0 1 1 0 1 1 1 0 Mur ligase family, catalytic domain YjeF_N PF03853.15 AID28903.1 - 0.046 13.6 0.6 0.084 12.8 0.6 1.4 1 0 0 1 1 1 0 YjeF-related protein N-terminus DFP PF04127.15 AID28903.1 - 0.068 13.0 2.1 0.37 10.6 0.4 2.2 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Glyco_trans_4_4 PF13579.6 AID28903.1 - 0.17 12.3 5.1 0.12 12.8 2.8 2.1 2 1 0 2 2 2 0 Glycosyl transferase 4-like domain LysR_substrate PF03466.20 AID28904.1 - 9.8e-46 155.7 1.1 1.5e-45 155.2 1.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28904.1 - 6.6e-19 67.6 1.9 1.3e-18 66.7 1.9 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 AID28904.1 - 0.0041 16.9 3.4 0.0075 16.1 0.4 2.9 3 1 1 4 4 4 1 IclR helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID28904.1 - 0.0066 15.8 0.1 0.018 14.4 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_20 PF12840.7 AID28904.1 - 0.016 15.3 0.2 0.045 13.8 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain GlcNAc_2-epim PF07221.11 AID28905.1 - 2.1e-106 356.0 0.8 3.3e-106 355.4 0.8 1.3 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) NTP_transferase PF00483.23 AID28905.1 - 1.9e-47 162.0 0.0 3.1e-47 161.2 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase MannoseP_isomer PF01050.18 AID28905.1 - 2.9e-05 24.0 0.0 4.8e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Aldedh PF00171.22 AID28906.1 - 1.8e-170 567.5 0.0 2e-170 567.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family GMC_oxred_N PF00732.19 AID28907.1 - 1.5e-93 313.5 0.1 2.5e-93 312.7 0.0 1.4 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID28907.1 - 1.9e-40 138.7 0.0 4.1e-40 137.6 0.0 1.5 2 0 0 2 2 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID28907.1 - 4.6e-06 26.0 0.7 0.00084 18.5 0.1 2.4 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 AID28907.1 - 0.00043 20.5 0.7 0.0014 18.8 0.1 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID28907.1 - 0.001 18.8 1.9 0.0018 17.9 0.3 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID28907.1 - 0.01 15.1 0.2 0.019 14.2 0.2 1.4 1 0 0 1 1 1 0 Thi4 family TrkA_N PF02254.18 AID28907.1 - 0.011 16.0 0.1 0.21 11.9 0.1 2.5 2 0 0 2 2 2 0 TrkA-N domain Pyr_redox_2 PF07992.14 AID28907.1 - 0.019 14.2 0.3 0.035 13.3 0.1 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 AID28907.1 - 0.024 15.2 1.2 0.047 14.3 0.1 2.0 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent GIDA PF01134.22 AID28907.1 - 0.039 13.0 0.1 2.9 6.9 0.0 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A ApbA PF02558.16 AID28907.1 - 0.042 13.5 0.4 0.19 11.4 0.1 2.0 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 AID28907.1 - 0.051 12.8 0.8 0.1 11.8 0.3 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID28907.1 - 0.1 11.6 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein PALP PF00291.25 AID28908.1 - 1.4e-74 251.1 5.8 1.6e-74 251.0 5.8 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Sulfatase PF00884.23 AID28909.1 - 4.8e-46 157.6 0.0 7.9e-46 156.9 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Choline_sulf_C PF12411.8 AID28909.1 - 5.6e-22 77.3 0.9 1.2e-21 76.3 0.9 1.6 1 0 0 1 1 1 1 Choline sulfatase enzyme C terminal Phosphodiest PF01663.22 AID28909.1 - 3.8e-08 33.3 0.0 0.0038 16.9 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4976 PF16347.5 AID28909.1 - 9.5e-08 32.2 0.0 2.6e-07 30.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) DUF229 PF02995.17 AID28909.1 - 0.00017 20.4 0.0 0.0002 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase_C PF14707.6 AID28909.1 - 0.0014 19.4 0.3 0.012 16.3 0.1 2.4 1 1 1 2 2 2 1 C-terminal region of aryl-sulfatase TetR_C_6 PF13977.6 AID28910.1 - 1.4e-25 89.7 2.5 1.4e-25 89.7 2.5 2.0 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 AID28910.1 - 2.5e-11 43.2 0.4 4.8e-11 42.3 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID28910.1 - 0.00089 19.4 2.6 0.00089 19.4 2.6 2.2 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain Thiolase_N PF00108.23 AID28911.1 - 1.4e-20 73.7 0.6 1.1e-19 70.8 0.6 2.1 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID28911.1 - 1.3e-11 44.2 1.1 2.4e-10 40.1 0.2 2.4 2 1 0 2 2 2 1 Thiolase, C-terminal domain ACP_syn_III PF08545.10 AID28911.1 - 3.1e-06 26.9 0.4 0.014 15.2 0.1 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.26 AID28911.1 - 6.3e-05 22.7 2.5 0.011 15.4 1.2 2.8 2 1 1 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID28911.1 - 0.0098 15.9 0.1 0.49 10.4 0.1 3.0 2 1 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Asparaginase_II PF06089.12 AID28912.1 - 1.8e-112 375.6 8.4 2e-112 375.4 8.4 1.0 1 0 0 1 1 1 1 L-asparaginase II HDOD PF08668.12 AID28912.1 - 0.028 13.9 0.1 0.05 13.1 0.1 1.3 1 0 0 1 1 1 0 HDOD domain Beta_helix PF13229.6 AID28913.1 - 3.4e-35 121.2 66.5 4.4e-16 59.1 20.6 3.1 1 1 3 4 4 4 4 Right handed beta helix region NosD PF05048.13 AID28913.1 - 7.3e-12 45.1 16.8 0.00013 21.3 0.1 3.1 1 1 2 3 3 3 3 Periplasmic copper-binding protein (NosD) Pectate_lyase_3 PF12708.7 AID28913.1 - 1e-07 32.0 16.1 2.3e-05 24.3 0.0 4.0 2 1 2 4 4 4 2 Pectate lyase superfamily protein GreA_GreB PF01272.19 AID28914.1 - 3.2e-20 71.8 0.2 5.3e-20 71.1 0.2 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term MM_CoA_mutase PF01642.22 AID28915.1 - 2.7e-229 762.0 0.3 3.3e-229 761.7 0.3 1.1 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase B12-binding PF02310.19 AID28915.1 - 8.2e-15 54.9 0.4 1.9e-14 53.7 0.4 1.6 1 0 0 1 1 1 1 B12 binding domain GP68 PF17469.2 AID28915.1 - 0.016 15.6 0.6 0.045 14.1 0.1 2.0 2 0 0 2 2 2 0 Phage protein Gp68 PhnI PF05861.12 AID28915.1 - 0.036 12.9 0.0 0.075 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) RbsD_FucU PF05025.13 AID28915.1 - 0.13 12.7 0.3 0.58 10.6 0.0 2.2 3 0 0 3 3 3 0 RbsD / FucU transport protein family MM_CoA_mutase PF01642.22 AID28916.1 - 5e-88 295.9 0.0 7.2e-88 295.4 0.0 1.1 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase DUF853 PF05872.12 AID28917.1 - 1.1e-246 819.2 0.0 1.3e-246 819.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) DUF87 PF01935.17 AID28917.1 - 7.9e-05 22.9 0.0 0.00015 21.9 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_22 PF13401.6 AID28917.1 - 0.00014 22.1 0.1 0.008 16.5 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID28917.1 - 0.00018 21.3 0.8 0.0053 16.5 0.7 2.8 2 1 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 AID28917.1 - 0.0003 20.2 0.0 0.0082 15.5 0.0 2.4 2 0 0 2 2 2 1 FtsK/SpoIIIE family ResIII PF04851.15 AID28917.1 - 0.00033 20.7 0.0 0.029 14.4 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_10 PF12846.7 AID28917.1 - 0.00046 19.2 0.0 0.42 9.5 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain AAA_16 PF13191.6 AID28917.1 - 0.0023 18.3 3.2 0.084 13.3 0.9 3.0 1 1 2 3 3 3 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 AID28917.1 - 0.0038 16.2 0.1 0.014 14.3 0.0 1.8 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 AID28917.1 - 0.0055 16.0 0.7 2.1 7.5 0.2 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Zot PF05707.12 AID28917.1 - 0.012 15.3 0.0 0.095 12.3 0.0 2.1 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) T2SSE PF00437.20 AID28917.1 - 0.018 14.1 0.1 0.038 13.1 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.29 AID28917.1 - 0.018 15.4 0.0 2.1 8.8 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TraG-D_C PF12696.7 AID28917.1 - 0.023 14.7 0.0 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG AAA_19 PF13245.6 AID28917.1 - 0.044 14.1 2.5 0.5 10.7 0.9 2.9 2 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 AID28917.1 - 0.047 13.2 0.0 0.096 12.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 AID28917.1 - 0.078 13.2 0.2 0.32 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain Hydrolase_6 PF13344.6 AID28917.1 - 0.11 12.7 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Peripla_BP_4 PF13407.6 AID28919.1 - 3.9e-24 85.6 0.0 9.4e-24 84.4 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein domain LacI PF00356.21 AID28919.1 - 4.2e-13 48.8 0.3 1.2e-12 47.4 0.3 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_Tnp_ISL3 PF13542.6 AID28919.1 - 0.011 15.1 0.1 0.028 13.8 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_6 PF01418.17 AID28919.1 - 0.017 15.1 0.1 0.088 12.8 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_7 PF02796.15 AID28919.1 - 0.033 14.2 0.0 0.074 13.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_3 PF01381.22 AID28919.1 - 0.075 13.1 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_31 PF13560.6 AID28919.1 - 0.1 13.0 1.1 0.54 10.6 0.2 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain FA_hydroxylase PF04116.13 AID28920.1 - 1.3e-17 64.4 15.8 1.3e-17 64.4 15.8 2.5 2 1 1 3 3 3 1 Fatty acid hydroxylase superfamily Peripla_BP_4 PF13407.6 AID28921.1 - 5.6e-34 117.9 5.7 8.6e-34 117.3 5.7 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28921.1 - 1.2e-05 24.9 0.1 1.6e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Pectate_lyase PF03211.13 AID28921.1 - 0.03 13.9 0.2 0.052 13.1 0.2 1.3 1 0 0 1 1 1 0 Pectate lyase BPD_transp_2 PF02653.16 AID28922.1 - 1.3e-55 188.5 46.9 1.9e-55 187.9 46.9 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component TPIP1 PF15338.6 AID28922.1 - 0.19 11.8 4.5 0.84 9.7 0.5 2.5 1 1 1 2 2 2 0 p53-regulated apoptosis-inducing protein 1 Phage_holin_2_3 PF16080.5 AID28922.1 - 6.2 6.7 8.8 3.5 7.5 3.7 3.1 2 0 0 2 2 2 0 Bacteriophage holin family HP1 ABC_tran PF00005.27 AID28923.1 - 3.8e-29 101.9 0.0 6e-28 98.1 0.0 2.0 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 AID28923.1 - 4e-12 46.5 0.2 2.4e-05 24.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28923.1 - 0.0013 18.2 0.0 0.47 9.8 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28923.1 - 0.0021 17.8 0.0 0.0043 16.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID28923.1 - 0.0026 16.6 0.0 0.086 11.6 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID28923.1 - 0.0049 16.8 0.0 0.009 15.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID28923.1 - 0.016 15.7 0.0 0.027 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID28923.1 - 0.033 13.9 0.6 1.8 8.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 AID28923.1 - 0.082 13.2 0.1 2.6 8.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 AID28923.1 - 0.084 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 AID28923.1 - 0.15 11.7 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain DLIC PF05783.11 AID28923.1 - 0.16 10.8 0.0 0.22 10.3 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) TsaE PF02367.17 AID28923.1 - 0.17 11.9 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rieske PF00355.26 AID28924.1 - 4.2e-18 65.1 0.4 4.9e-18 64.9 0.4 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 AID28924.1 - 3e-12 46.4 0.0 3.3e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF4904 PF16247.5 AID28924.1 - 0.07 12.9 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4904) Cytotoxic PF09000.10 AID28924.1 - 0.17 12.2 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 Cytotoxic AP_endonuc_2 PF01261.24 AID28925.1 - 7.9e-18 64.7 0.0 1.3e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Pantoate_transf PF02548.15 AID28926.1 - 2.3e-40 138.6 0.0 6.1e-35 120.9 0.0 2.1 2 0 0 2 2 2 2 Ketopantoate hydroxymethyltransferase YkuD PF03734.14 AID28927.1 - 1.8e-16 60.9 0.0 2.4e-16 60.5 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain UCR_Fe-S_N PF10399.9 AID28927.1 - 0.052 12.9 0.6 0.13 11.7 0.6 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HAD_2 PF13419.6 AID28928.1 - 1e-10 42.0 0.0 1.5e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID28928.1 - 1.8e-08 34.9 0.0 5.1e-07 30.2 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID28928.1 - 0.00011 22.7 0.1 0.00015 22.2 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID28928.1 - 0.0057 16.8 0.0 0.031 14.4 0.0 2.0 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Aminotran_4 PF01063.19 AID28929.1 - 8.4e-37 127.2 0.0 9.9e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Sod_Fe_C PF02777.18 AID28930.1 - 8.2e-33 112.6 0.1 2e-32 111.4 0.0 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 AID28930.1 - 1.4e-27 96.0 4.3 2.3e-27 95.2 4.3 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Cytochrom_C_2 PF01322.20 AID28931.1 - 5.1e-28 98.4 0.1 5.9e-28 98.2 0.1 1.0 1 0 0 1 1 1 1 Cytochrome C' Fer2_BFD PF04324.15 AID28931.1 - 0.061 13.7 0.1 0.1 13.0 0.1 1.3 1 0 0 1 1 1 0 BFD-like [2Fe-2S] binding domain Cytochrom_C PF00034.21 AID28932.1 - 9.7e-14 52.3 0.0 4.7e-08 34.1 0.0 2.4 2 0 0 2 2 2 2 Cytochrome c Cytochrome_CBB3 PF13442.6 AID28932.1 - 2.3e-08 34.2 0.1 0.012 15.9 0.0 2.6 2 0 0 2 2 2 2 Cytochrome C oxidase, cbb3-type, subunit III Paired_CXXCH_1 PF09699.10 AID28932.1 - 0.00057 19.6 0.5 0.099 12.4 0.0 2.3 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 AID28932.1 - 0.03 14.3 0.0 8.6 6.4 0.0 2.2 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Beta-lactamase PF00144.24 AID28933.1 - 1.1e-17 64.3 0.6 1.6e-17 63.8 0.6 1.2 1 0 0 1 1 1 1 Beta-lactamase AraC_binding PF02311.19 AID28934.1 - 0.00098 19.0 0.2 0.0013 18.6 0.2 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain PSD1 PF07587.11 AID28934.1 - 0.016 14.7 0.0 0.016 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1553) SET PF00856.28 AID28935.1 - 2.1e-14 54.3 0.2 1.7e-09 38.3 0.1 2.1 1 1 1 2 2 2 2 SET domain LysE PF01810.18 AID28936.1 - 1.4e-29 103.0 11.9 1.7e-29 102.7 11.9 1.1 1 0 0 1 1 1 1 LysE type translocator Mntp PF02659.15 AID28936.1 - 0.0038 17.0 1.8 0.0038 17.0 1.8 2.5 2 1 0 2 2 2 1 Putative manganese efflux pump TerC PF03741.16 AID28936.1 - 0.016 14.9 8.5 0.011 15.4 4.6 2.3 1 1 1 2 2 2 0 Integral membrane protein TerC family Ribosomal_S5_C PF03719.15 AID28936.1 - 0.14 11.6 1.4 0.25 10.8 0.5 1.8 2 0 0 2 2 2 0 Ribosomal protein S5, C-terminal domain CRPA PF05745.11 AID28936.1 - 1.5 8.9 7.1 2.6 8.1 0.4 2.3 2 0 0 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) Peptidase_S9_N PF02897.15 AID28937.1 - 8.5e-85 285.0 0.0 1e-84 284.8 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S9 PF00326.21 AID28937.1 - 4.7e-66 222.3 0.0 8.3e-66 221.5 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Esterase_phd PF10503.9 AID28937.1 - 0.058 12.9 0.2 0.097 12.1 0.2 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase Tannase PF07519.11 AID28937.1 - 0.22 10.4 0.3 0.34 9.8 0.3 1.2 1 0 0 1 1 1 0 Tannase and feruloyl esterase SH3_3 PF08239.11 AID28938.1 - 6e-05 23.3 0.2 9.3e-05 22.6 0.2 1.3 1 0 0 1 1 1 1 Bacterial SH3 domain ROS_MUCR PF05443.11 AID28939.1 - 1.4e-50 170.6 0.0 1.6e-50 170.4 0.0 1.0 1 0 0 1 1 1 1 ROS/MUCR transcriptional regulator protein zf-C2HE PF16278.5 AID28939.1 - 0.028 14.9 0.2 0.047 14.1 0.2 1.4 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger SufE PF02657.15 AID28940.1 - 3.8e-47 159.1 0.0 4.3e-47 158.9 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain DUF5330 PF17264.2 AID28941.1 - 2.2e-26 91.6 0.7 2.7e-26 91.3 0.7 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5330) HATPase_c PF02518.26 AID28942.1 - 2.2e-26 92.6 0.1 4.3e-26 91.6 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID28942.1 - 1.5e-18 66.5 1.7 7.7e-18 64.3 0.0 2.8 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 AID28942.1 - 0.016 15.2 0.0 0.035 14.1 0.0 1.5 1 0 0 1 1 1 0 PAS fold PG_binding_1 PF01471.18 AID28943.1 - 4.3e-27 94.1 0.3 1.1e-12 48.0 0.1 2.4 2 0 0 2 2 2 2 Putative peptidoglycan binding domain PG_binding_3 PF09374.10 AID28943.1 - 3.2e-05 24.1 0.2 0.25 11.6 0.0 2.3 2 0 0 2 2 2 2 Predicted Peptidoglycan domain PG_binding_2 PF08823.11 AID28943.1 - 0.0025 18.1 0.0 0.075 13.4 0.0 2.3 2 0 0 2 2 2 1 Putative peptidoglycan binding domain Pentapeptide_2 PF01469.18 AID28943.1 - 0.077 12.9 0.7 0.14 12.0 0.7 1.4 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) DUF1491 PF07372.12 AID28944.1 - 5e-27 94.3 0.0 6.2e-27 94.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1491) DUF2336 PF10098.9 AID28945.1 - 1.3e-12 47.8 17.9 2.9e-07 30.2 1.8 2.9 2 1 1 3 3 3 2 Uncharacterised protein conserved in bacteria (DUF2336) DUF1254 PF06863.12 AID28947.1 - 6e-08 32.8 0.0 8.5e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1254) DUF1214 PF06742.11 AID28948.1 - 6.2e-17 62.0 0.0 7.9e-17 61.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) Transgly PF00912.22 AID28949.1 - 2.4e-61 206.3 0.0 4.2e-61 205.5 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase Transpeptidase PF00905.22 AID28949.1 - 4e-26 91.9 2.6 1.3e-25 90.3 2.6 1.7 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain P22_AR_C PF10548.9 AID28949.1 - 0.15 12.2 0.0 0.47 10.7 0.0 1.8 1 0 0 1 1 1 0 P22AR C-terminal domain Peptidase_M20 PF01546.28 AID28950.1 - 4.7e-24 85.2 0.1 6.3e-24 84.8 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID28950.1 - 2.5e-08 33.8 0.1 4.1e-08 33.1 0.1 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain BtpA PF03437.15 AID28951.1 - 7e-74 248.5 0.1 7.9e-74 248.3 0.1 1.0 1 0 0 1 1 1 1 BtpA family Trp_syntA PF00290.20 AID28951.1 - 0.0023 16.8 0.1 0.004 16.0 0.1 1.4 1 0 0 1 1 1 1 Tryptophan synthase alpha chain Peptidase_C26 PF07722.13 AID28951.1 - 0.0083 15.9 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 His_biosynth PF00977.21 AID28951.1 - 0.011 15.2 0.1 0.03 13.8 0.1 1.7 2 0 0 2 2 2 0 Histidine biosynthesis protein PfkB PF00294.24 AID28952.1 - 1.5e-41 142.7 4.2 1.8e-41 142.4 4.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID28952.1 - 7.9e-06 25.4 0.3 1.1e-05 24.9 0.3 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase GATase1_like PF07090.11 AID28953.1 - 2.1e-130 433.5 0.0 2.3e-130 433.3 0.0 1.0 1 0 0 1 1 1 1 Putative glutamine amidotransferase ThuA PF06283.11 AID28953.1 - 4.1e-05 23.9 0.0 6.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Trehalose utilisation PTE PF02126.18 AID28954.1 - 9.3e-66 222.3 0.0 1.1e-65 222.0 0.0 1.0 1 0 0 1 1 1 1 Phosphotriesterase family TatD_DNase PF01026.21 AID28954.1 - 0.022 14.1 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase BPD_transp_2 PF02653.16 AID28955.1 - 1.6e-47 161.9 45.4 1.6e-47 161.9 45.4 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID28956.1 - 1e-31 110.3 0.0 1.4e-31 109.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID28956.1 - 2.4e-09 37.5 0.1 0.00087 19.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID28956.1 - 4.4e-06 26.3 0.6 5.4e-05 22.7 0.6 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID28956.1 - 0.0043 16.8 0.1 0.0098 15.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID28956.1 - 0.017 13.9 1.1 1.1 8.0 0.3 3.0 2 1 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID28956.1 - 0.025 14.5 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 AID28956.1 - 0.031 14.8 0.0 0.046 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID28956.1 - 0.037 14.1 0.0 0.069 13.2 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.29 AID28956.1 - 0.043 14.2 0.1 4.1 7.8 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MukB PF04310.12 AID28956.1 - 0.067 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 MukB N-terminal AAA_25 PF13481.6 AID28956.1 - 0.14 11.7 0.6 0.43 10.1 0.6 1.9 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 AID28956.1 - 0.15 10.7 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID28956.1 - 0.16 11.2 0.1 0.3 10.3 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 AID28956.1 - 0.28 10.8 0.1 0.49 10.0 0.1 1.3 1 0 0 1 1 1 0 AAA ATPase domain Peripla_BP_4 PF13407.6 AID28957.1 - 5.9e-53 180.1 20.5 7.1e-53 179.8 20.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID28957.1 - 6.7e-17 61.8 1.9 8.5e-17 61.5 1.9 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 AID28957.1 - 2.3e-06 27.5 14.3 0.00032 20.5 14.3 2.8 1 1 1 2 2 2 2 Periplasmic binding protein ABC_sub_bind PF04392.12 AID28957.1 - 0.0058 15.9 8.1 0.0058 15.9 6.5 1.7 1 1 1 2 2 2 1 ABC transporter substrate binding protein Cupin_2 PF07883.11 AID28958.1 - 7.7e-19 67.2 0.3 1.2e-18 66.6 0.3 1.3 1 0 0 1 1 1 1 Cupin domain HTH_31 PF13560.6 AID28958.1 - 1.7e-13 50.7 0.6 3e-13 49.9 0.1 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 AID28958.1 - 3.1e-11 43.2 0.0 5.1e-11 42.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix AraC_binding PF02311.19 AID28958.1 - 8.9e-08 32.1 0.1 1.4e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_19 PF12844.7 AID28958.1 - 2.3e-07 30.7 0.0 4.5e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 AID28958.1 - 0.00013 22.3 0.0 0.00023 21.5 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Cupin_3 PF05899.12 AID28958.1 - 0.00037 20.1 0.0 0.00073 19.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 AID28958.1 - 0.00054 19.6 0.0 0.00086 18.9 0.0 1.3 1 0 0 1 1 1 1 Cupin HTH_25 PF13413.6 AID28958.1 - 0.017 15.0 0.1 0.048 13.5 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain CENP-C_C PF11699.8 AID28958.1 - 0.018 15.2 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like Asp_Arg_Hydrox PF05118.15 AID28958.1 - 0.077 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase HTH_37 PF13744.6 AID28958.1 - 0.079 12.9 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Amidinotransf PF02274.17 AID28959.1 - 4.4e-59 200.3 0.0 1.2e-57 195.5 0.0 2.0 1 1 0 1 1 1 1 Amidinotransferase PAD_porph PF04371.15 AID28959.1 - 0.03 13.6 0.0 0.062 12.6 0.0 1.6 1 0 0 1 1 1 0 Porphyromonas-type peptidyl-arginine deiminase LysR_substrate PF03466.20 AID28962.1 - 4.1e-27 94.9 0.0 6.3e-27 94.3 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID28962.1 - 2.9e-18 65.6 0.8 4.8e-18 64.9 0.8 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID28962.1 - 0.0018 18.1 0.3 0.0037 17.0 0.3 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_5 PF01022.20 AID28962.1 - 0.013 15.4 0.2 0.027 14.3 0.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID28962.1 - 0.11 12.4 0.3 0.23 11.4 0.3 1.5 1 0 0 1 1 1 0 MarR family ABC_tran PF00005.27 AID28963.1 - 1.8e-33 116.0 0.0 3e-33 115.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID28963.1 - 2.7e-15 56.3 0.1 2.1e-14 53.4 0.0 2.3 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID28963.1 - 1.3e-07 31.8 0.3 0.0062 16.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 AID28963.1 - 0.00035 20.2 0.0 0.011 15.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 AID28963.1 - 0.0017 17.8 0.2 0.14 11.6 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID28963.1 - 0.0048 16.6 0.0 0.0063 16.3 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain TOBE PF03459.17 AID28963.1 - 0.006 16.9 0.2 0.016 15.5 0.2 1.7 1 0 0 1 1 1 1 TOBE domain AAA_22 PF13401.6 AID28963.1 - 0.012 15.9 0.2 0.097 12.9 0.2 2.1 1 1 0 1 1 1 0 AAA domain TOBE_3 PF12857.7 AID28963.1 - 0.012 15.5 0.0 0.032 14.1 0.0 1.7 1 0 0 1 1 1 0 TOBE-like domain AAA_16 PF13191.6 AID28963.1 - 0.016 15.6 0.2 0.031 14.6 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 AID28963.1 - 0.02 14.7 0.1 0.043 13.6 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 AID28963.1 - 0.049 13.9 0.3 0.85 9.9 0.2 2.7 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 AID28963.1 - 0.064 13.8 0.6 0.11 13.0 0.6 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 AID28963.1 - 0.14 11.2 0.1 0.23 10.5 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_5 PF07728.14 AID28963.1 - 0.18 11.8 0.1 0.67 10.0 0.1 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Pox_A32 PF04665.12 AID28963.1 - 0.28 10.6 0.1 0.5 9.8 0.1 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein SBP_bac_8 PF13416.6 AID28964.1 - 7.2e-25 88.4 7.7 1e-24 87.9 7.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID28964.1 - 2.2e-10 41.0 12.8 3.9e-10 40.2 12.8 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID28964.1 - 5.4e-08 32.5 1.7 7.3e-08 32.1 1.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID28965.1 - 7.2e-10 38.9 21.5 7.2e-10 38.9 21.5 2.3 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID28966.1 - 7.6e-16 58.4 23.0 7.6e-16 58.4 23.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1360 PF07098.11 AID28966.1 - 1.7 8.6 5.6 4.6 7.2 0.2 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1360) adh_short_C2 PF13561.6 AID28967.1 - 1.2e-45 155.9 0.0 1.4e-45 155.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID28967.1 - 3.1e-37 127.9 0.0 3.8e-37 127.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF1776 PF08643.10 AID28967.1 - 0.0002 20.8 0.0 0.00023 20.6 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF3168 PF11367.8 AID28968.1 - 8.7e-20 71.0 0.1 9.9e-20 70.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3168) Trans_reg_C PF00486.28 AID28970.1 - 8.8e-25 86.6 0.1 2.6e-24 85.1 0.1 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID28970.1 - 8.2e-24 83.9 0.0 1.3e-23 83.3 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 AID28971.1 - 5.5e-12 46.2 0.0 1.6e-11 44.7 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 AID28971.1 - 5.2e-05 23.1 0.0 0.00012 21.9 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 AID28971.1 - 0.00051 20.0 0.0 0.00098 19.1 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID28971.1 - 0.0017 18.2 0.0 0.0035 17.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID28971.1 - 0.0039 17.2 0.8 0.011 15.7 0.1 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain 17kDa_Anti_2 PF16998.5 AID28972.1 - 0.00047 20.1 0.5 0.00069 19.5 0.5 1.3 1 0 0 1 1 1 1 17 kDa outer membrane surface antigen TPR_19 PF14559.6 AID28973.1 - 7.8e-11 42.3 9.3 8.5e-05 23.0 3.1 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID28973.1 - 9.4e-10 37.9 5.0 0.75 10.1 0.0 4.7 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_16 PF13432.6 AID28973.1 - 4.9e-09 36.7 32.6 3.8e-07 30.6 3.0 4.7 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID28973.1 - 8.5e-07 28.6 6.0 0.0088 15.7 0.8 3.7 3 1 0 3 3 3 2 TPR repeat TPR_1 PF00515.28 AID28973.1 - 1.1e-06 28.1 2.2 1.2 9.1 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat BTAD PF03704.17 AID28973.1 - 2.6e-06 27.9 1.9 0.26 11.7 0.0 3.5 3 0 0 3 3 3 2 Bacterial transcriptional activator domain TPR_17 PF13431.6 AID28973.1 - 2.8e-06 27.3 0.1 0.0018 18.5 0.3 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID28973.1 - 3e-06 27.6 23.9 0.067 14.0 0.3 6.6 4 3 2 6 6 6 3 Tetratricopeptide repeat TPR_20 PF14561.6 AID28973.1 - 5.4e-06 26.7 9.7 0.0049 17.2 0.7 4.9 3 2 2 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID28973.1 - 2.5e-05 24.1 0.1 8.3 6.9 0.0 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_15 PF13429.6 AID28973.1 - 0.00073 18.8 3.5 0.11 11.7 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 AID28973.1 - 0.0016 18.9 5.3 0.61 10.9 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 AID28973.1 - 0.0066 16.4 2.3 0.17 11.8 0.0 3.0 3 0 0 3 3 3 1 Virulence factor membrane-bound polymerase, C-terminal ANAPC3 PF12895.7 AID28973.1 - 0.055 13.7 0.1 19 5.6 0.1 2.9 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 AID28973.1 - 0.097 12.8 4.0 7.1 6.9 0.0 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat DUF4919 PF16266.5 AID28973.1 - 0.1 12.5 0.0 39 4.1 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) ChAPs PF09295.10 AID28973.1 - 0.23 10.4 0.0 17 4.3 0.0 2.1 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) CcmE PF03100.15 AID28974.1 - 6.5e-44 149.0 0.0 7.5e-44 148.8 0.0 1.0 1 0 0 1 1 1 1 CcmE DUF3046 PF11248.8 AID28974.1 - 0.074 13.4 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3046) CcmF_C PF16327.5 AID28975.1 - 1.5e-110 369.5 7.5 1.5e-110 369.5 7.5 2.7 2 1 0 2 2 2 1 Cytochrome c-type biogenesis protein CcmF C-terminal Cytochrom_C_asm PF01578.20 AID28975.1 - 3.4e-52 177.3 18.1 3.4e-52 177.3 18.1 2.7 3 0 0 3 3 3 1 Cytochrome C assembly protein CcmH PF03918.14 AID28976.1 - 2.5e-51 172.8 0.0 3e-51 172.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein zf-dskA_traR PF01258.17 AID28976.1 - 0.15 12.0 0.2 0.36 10.8 0.2 1.7 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Herpes_gE PF02480.16 AID28976.1 - 0.17 10.6 0.0 0.22 10.2 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E PDZ_2 PF13180.6 AID28977.1 - 1.9e-30 105.0 11.7 1.2e-16 60.8 0.2 2.9 4 0 0 4 4 4 2 PDZ domain Trypsin_2 PF13365.6 AID28977.1 - 4.6e-28 99.0 2.6 4.6e-28 99.0 2.6 2.2 2 0 0 2 2 2 1 Trypsin-like peptidase domain PDZ_6 PF17820.1 AID28977.1 - 1.9e-22 78.8 5.5 1.5e-11 44.0 0.1 3.4 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 AID28977.1 - 2.9e-19 69.2 2.9 6.8e-09 36.0 0.3 2.9 2 0 0 2 2 2 2 PDZ domain Trypsin PF00089.26 AID28977.1 - 5.7e-11 42.6 0.0 1.4e-10 41.3 0.0 1.7 1 0 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 AID28977.1 - 3.7e-07 30.0 4.4 0.012 15.6 0.2 2.8 3 0 0 3 3 3 2 Tricorn protease PDZ domain Peptidase_S29 PF02907.15 AID28977.1 - 0.012 15.4 0.1 0.13 12.0 0.0 2.4 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease PDZ_1 PF12812.7 AID28977.1 - 0.026 14.5 0.1 4.1 7.5 0.0 2.5 2 0 0 2 2 2 0 PDZ-like domain Peptidase_S46 PF10459.9 AID28977.1 - 0.04 12.6 4.8 0.58 8.7 0.4 2.5 3 0 0 3 3 3 0 Peptidase S46 DUF3394 PF11874.8 AID28977.1 - 0.083 12.6 0.0 0.38 10.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3394) Trans_reg_C PF00486.28 AID28978.1 - 9.2e-29 99.4 0.1 1.7e-28 98.5 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID28978.1 - 1.7e-23 82.9 0.0 2.9e-23 82.2 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.11 AID28978.1 - 0.065 13.6 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HATPase_c PF02518.26 AID28979.1 - 7.9e-16 58.6 0.0 1.3e-15 57.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID28979.1 - 4.2e-11 43.1 3.8 1.9e-09 37.7 0.3 3.3 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 AID28979.1 - 2.3e-09 37.1 0.6 6.1e-09 35.8 0.2 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AID28979.1 - 5.1e-06 26.5 0.0 1.2e-05 25.2 0.0 1.7 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID28979.1 - 0.0023 17.7 0.0 0.0041 17.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 AID28979.1 - 0.0072 16.2 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 GHKL domain LapA_dom PF06305.11 AID28979.1 - 4.6 7.1 5.4 20 5.1 1.0 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain GlnE PF03710.15 AID28980.1 - 1.3e-159 529.3 0.5 3.5e-79 265.7 0.1 2.3 2 0 0 2 2 2 2 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 AID28980.1 - 4.6e-48 163.0 4.6 4.7e-41 140.3 1.6 3.1 3 0 0 3 3 3 2 GlnD PII-uridylyltransferase HTH_18 PF12833.7 AID28980.1 - 0.003 17.8 0.5 0.011 16.0 0.5 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain XPC-binding PF09280.11 AID28980.1 - 0.0061 16.3 0.1 0.021 14.5 0.1 2.0 2 0 0 2 2 2 1 XPC-binding domain NTP_transf_2 PF01909.23 AID28980.1 - 0.0073 16.6 0.2 4.1 7.8 0.1 2.6 2 0 0 2 2 2 2 Nucleotidyltransferase domain DUF294 PF03445.13 AID28980.1 - 0.023 14.5 0.0 0.34 10.7 0.0 2.3 2 0 0 2 2 2 0 Putative nucleotidyltransferase DUF294 EF-hand_1 PF00036.32 AID28982.1 - 8.8e-13 46.8 0.1 8e-05 21.9 0.0 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 AID28982.1 - 3.5e-12 45.2 0.3 0.0001 21.9 0.0 4.3 3 1 1 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 AID28982.1 - 2.7e-08 32.9 0.3 1.1e-05 24.6 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 AID28982.1 - 3.6e-08 33.8 1.5 0.00058 20.3 0.1 3.1 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 AID28982.1 - 0.00071 19.4 0.7 1.4 8.8 0.0 3.5 3 1 0 3 3 3 1 EF-hand domain pair T2SSM_b PF10741.9 AID28982.1 - 0.0022 17.8 0.1 0.043 13.6 0.0 2.2 1 1 1 2 2 2 1 Type II secretion system (T2SS), protein M subtype b DUF4179 PF13786.6 AID28982.1 - 0.084 13.4 0.2 0.15 12.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) Limkain-b1 PF11608.8 AID28982.1 - 0.091 12.9 0.2 0.18 11.9 0.2 1.5 1 1 0 1 1 1 0 Limkain b1 rve PF00665.26 AID28982.1 - 0.11 12.7 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain Xan_ur_permease PF00860.20 AID28982.1 - 0.3 9.7 0.2 0.41 9.3 0.2 1.1 1 0 0 1 1 1 0 Permease family HATPase_c PF02518.26 AID28983.1 - 1.4e-27 96.4 0.1 3.1e-27 95.3 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID28983.1 - 1.1e-19 70.2 0.2 2.6e-18 65.8 0.0 2.7 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.12 AID28983.1 - 6.8e-17 61.5 0.3 2.1e-16 60.0 0.1 1.9 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.7 AID28983.1 - 3.9e-11 43.1 0.4 8.6e-09 35.6 0.1 4.1 3 1 0 3 3 3 1 PAS fold PAS_8 PF13188.7 AID28983.1 - 0.0001 22.3 0.1 0.041 13.9 0.0 2.7 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 AID28983.1 - 0.0011 19.0 0.1 2.7 8.0 0.0 3.0 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 AID28983.1 - 0.0017 18.6 0.2 0.19 12.0 0.1 3.3 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 AID28983.1 - 0.003 17.5 0.0 0.0062 16.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID28983.1 - 0.01 15.7 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 AID28983.1 - 0.048 13.8 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 PAS domain PAS_9 PF13426.7 AID28983.1 - 0.1 12.8 0.0 0.92 9.8 0.0 2.3 2 0 0 2 2 2 0 PAS domain DUF3458_C PF17432.2 AID28984.1 - 7.1e-110 367.3 6.4 1.2e-109 366.6 6.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 AID28984.1 - 2.2e-51 174.5 0.1 3.2e-51 174.0 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 AID28984.1 - 1.6e-23 83.0 0.0 3.5e-23 81.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 AID28984.1 - 1.3e-14 54.8 0.0 2.6e-14 53.8 0.0 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Peptidase_M61 PF05299.12 AID28984.1 - 0.03 14.7 0.2 0.079 13.4 0.2 1.8 1 1 0 1 1 1 0 M61 glycyl aminopeptidase DUF2268 PF10026.9 AID28984.1 - 0.037 13.6 0.0 0.064 12.8 0.0 1.3 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) Ald_Xan_dh_C2 PF02738.18 AID28985.1 - 1.1e-162 542.4 0.0 1.3e-162 542.1 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID28985.1 - 1.9e-21 76.4 0.0 3.7e-21 75.5 0.0 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EamA PF00892.20 AID28986.1 - 6.9e-22 78.1 39.8 6.8e-11 42.5 19.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 AID28986.1 - 0.0048 16.1 13.9 0.078 12.1 13.9 2.1 1 1 0 1 1 1 1 Nucleotide-sugar transporter TPT PF03151.16 AID28986.1 - 0.27 10.5 9.4 0.87 8.9 9.4 1.9 1 1 0 1 1 1 0 Triose-phosphate Transporter family MLTR_LBD PF17765.1 AID28987.1 - 1.5e-30 106.5 0.6 2.2e-30 106.0 0.6 1.2 1 0 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain HTH_3 PF01381.22 AID28987.1 - 1.7e-08 34.4 0.1 3.1e-08 33.6 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID28987.1 - 3.2e-08 33.8 2.7 6.9e-08 32.7 2.7 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AID28987.1 - 1.1e-05 25.3 0.0 1.8e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain UDG PF03167.19 AID28988.1 - 2.6e-42 144.4 0.0 3.6e-42 144.0 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF3486 PF11985.8 AID28988.1 - 0.04 14.3 0.1 0.1 13.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3486) ETF_QO PF05187.13 AID28991.1 - 3.6e-47 158.8 0.1 5.6e-47 158.2 0.1 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S FAD_binding_2 PF00890.24 AID28991.1 - 3e-10 39.8 1.9 3.3e-06 26.5 2.8 2.5 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 AID28991.1 - 1.1e-08 35.0 1.9 0.00018 21.2 0.8 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 AID28991.1 - 4e-08 32.8 0.0 4.9e-07 29.2 0.2 2.1 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 AID28991.1 - 4e-07 30.2 0.1 4e-07 30.2 0.1 2.5 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID28991.1 - 4.2e-06 26.3 1.0 5.8e-06 25.8 1.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID28991.1 - 5.9e-06 25.2 0.8 8.3e-06 24.7 0.8 1.2 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_2 PF07992.14 AID28991.1 - 1e-05 24.9 0.7 1.8e-05 24.1 0.7 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID28991.1 - 3.4e-05 23.1 0.9 5.5e-05 22.4 0.9 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 AID28991.1 - 0.00059 19.3 0.7 0.0009 18.7 0.7 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID28991.1 - 0.0034 16.7 0.3 0.007 15.6 0.3 1.5 2 0 0 2 2 2 1 FAD binding domain K_oxygenase PF13434.6 AID28991.1 - 0.0037 16.5 0.0 0.0053 15.9 0.0 1.2 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 AID28991.1 - 0.0054 17.3 0.2 3.4 8.3 0.7 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID28991.1 - 0.045 13.7 1.8 0.065 13.2 0.6 1.9 2 0 0 2 2 2 0 FAD-NAD(P)-binding GIDA PF01134.22 AID28991.1 - 0.054 12.6 1.0 0.079 12.0 1.0 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 AID28991.1 - 0.055 12.8 0.2 0.1 11.9 0.2 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Trp_halogenase PF04820.14 AID28991.1 - 0.069 12.0 1.0 0.14 11.0 0.9 1.5 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_7 PF12838.7 AID28991.1 - 0.085 13.5 1.1 0.16 12.5 1.1 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Mqo PF06039.15 AID28991.1 - 0.1 11.1 0.1 0.15 10.6 0.1 1.2 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) DUF922 PF06037.11 AID28992.1 - 5.5e-44 149.7 0.0 6.4e-44 149.5 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF922) AMNp_N PF10423.9 AID28994.1 - 3.6e-52 176.1 0.1 1e-51 174.7 0.0 1.8 2 0 0 2 2 2 1 Bacterial AMP nucleoside phosphorylase N-terminus PNP_UDP_1 PF01048.20 AID28994.1 - 2.2e-12 46.8 0.0 3.4e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Phosphorylase superfamily TRIQK PF15168.6 AID28996.1 - 0.23 11.4 0.2 0.29 11.0 0.2 1.2 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family DUF2147 PF09917.9 AID28997.1 - 4.1e-13 50.0 0.4 1.4e-12 48.3 0.1 1.8 1 1 1 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2147) Big_7 PF17957.1 AID28997.1 - 0.11 13.2 0.3 0.72 10.7 0.0 2.1 2 1 0 2 2 2 0 Bacterial Ig domain Sel1 PF08238.12 AID28998.1 - 1.2e-06 29.0 0.1 8.7e-06 26.2 0.0 2.3 2 0 0 2 2 2 1 Sel1 repeat Peripla_BP_6 PF13458.6 AID28999.1 - 2e-55 188.8 11.5 2.3e-55 188.6 11.5 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID28999.1 - 4.6e-24 85.2 0.0 8.3e-24 84.3 0.0 1.4 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 AID28999.1 - 1.7e-12 47.1 0.7 1.8e-06 27.2 0.1 2.5 2 1 0 2 2 2 2 Periplasmic binding protein domain Inhibitor_I36 PF03995.13 AID28999.1 - 0.031 14.2 0.1 1.8 8.5 0.0 2.6 2 0 0 2 2 2 0 Peptidase inhibitor family I36 DUF5633 PF18656.1 AID28999.1 - 0.17 11.8 0.8 0.98 9.4 0.8 2.5 1 1 0 1 1 1 0 Family of unknown function (DUF5633) CPSase_L_D2 PF02786.17 AID29000.1 - 5.8e-76 254.7 0.0 9.3e-76 254.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AID29000.1 - 1.5e-43 147.8 0.1 3.8e-43 146.5 0.1 1.8 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AID29000.1 - 8.8e-34 115.9 0.0 4.3e-33 113.6 0.0 2.1 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 AID29000.1 - 8.8e-17 60.7 0.5 2.9e-16 59.0 0.4 2.0 2 0 0 2 2 2 1 Biotin-requiring enzyme Dala_Dala_lig_C PF07478.13 AID29000.1 - 3.1e-10 39.9 0.0 7.1e-10 38.8 0.0 1.5 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 AID29000.1 - 1.7e-08 34.3 0.0 3.9e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 AID29000.1 - 1.2e-06 28.2 1.5 0.0046 16.7 0.0 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like ATP-grasp_3 PF02655.14 AID29000.1 - 0.011 15.8 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain HlyD_3 PF13437.6 AID29000.1 - 0.019 15.7 0.7 3.6 8.3 0.3 3.0 2 0 0 2 2 2 0 HlyD family secretion protein ATP-grasp_4 PF13535.6 AID29000.1 - 0.05 13.2 0.0 0.094 12.3 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain HlyD_D23 PF16576.5 AID29000.1 - 0.073 12.3 0.3 4.6 6.4 0.1 2.3 1 1 1 2 2 2 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Macro PF01661.21 AID29002.1 - 4.7e-44 149.2 0.1 6.3e-44 148.8 0.1 1.2 1 0 0 1 1 1 1 Macro domain Carboxyl_trans PF01039.22 AID29003.1 - 8.4e-150 499.7 0.0 1e-149 499.3 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 AID29003.1 - 6.1e-05 22.6 3.2 0.11 12.0 0.1 2.8 3 0 0 3 3 3 2 Malonate decarboxylase gamma subunit (MdcE) ECH_1 PF00378.20 AID29003.1 - 0.66 9.2 2.3 0.67 9.2 0.1 1.9 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase Acyl-CoA_dh_1 PF00441.24 AID29004.1 - 3.9e-44 150.5 1.0 7.1e-44 149.6 1.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 AID29004.1 - 3.4e-35 121.1 0.0 6.5e-35 120.2 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 AID29004.1 - 8.7e-27 93.2 0.1 5.1e-26 90.7 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 AID29004.1 - 4.8e-16 59.2 0.3 1.5e-15 57.7 0.1 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 AID29004.1 - 0.03 14.0 0.3 0.15 11.7 0.3 1.9 1 1 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal TetR_C_24 PF17932.1 AID29006.1 - 1.2e-28 99.7 1.4 1.7e-28 99.2 0.4 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID29006.1 - 1.5e-16 59.9 0.3 3.2e-16 58.9 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_7 PF14246.6 AID29006.1 - 0.00034 20.6 0.5 0.0012 18.9 0.1 2.1 2 0 0 2 2 2 1 AefR-like transcriptional repressor, C-terminal domain TetR_C_27 PF17935.1 AID29006.1 - 0.00037 20.5 0.1 0.0011 19.0 0.1 1.8 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 AID29006.1 - 0.0011 19.2 0.0 0.0022 18.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase TetR_C_4 PF08359.11 AID29006.1 - 0.0028 17.8 0.0 0.005 17.0 0.0 1.4 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region TetR_C_5 PF08360.11 AID29006.1 - 0.054 13.7 0.0 0.066 13.4 0.0 1.2 1 0 0 1 1 1 0 QacR-like protein, C-terminal region SUI1 PF01253.22 AID29006.1 - 0.16 12.5 0.0 0.29 11.7 0.0 1.4 1 0 0 1 1 1 0 Translation initiation factor SUI1 Acylphosphatase PF00708.18 AID29007.1 - 9.1e-24 83.7 0.0 1e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DUF2587 PF10759.9 AID29007.1 - 0.087 12.3 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) MarR_2 PF12802.7 AID29008.1 - 1.2e-18 66.7 2.6 1.5e-18 66.5 0.8 2.1 2 1 0 2 2 2 1 MarR family MarR PF01047.22 AID29008.1 - 0.0011 18.9 0.0 0.0082 16.0 0.0 2.3 2 1 0 2 2 2 1 MarR family Rrf2 PF02082.20 AID29008.1 - 0.0014 18.9 0.0 0.0054 17.1 0.0 1.9 1 1 1 2 2 2 1 Transcriptional regulator HTH_Crp_2 PF13545.6 AID29008.1 - 0.0015 18.5 0.2 0.0034 17.3 0.1 1.8 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 AID29008.1 - 0.0032 17.5 0.0 0.0079 16.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix Sigma70_r3 PF04539.16 AID29008.1 - 0.028 14.5 0.1 1 9.5 0.0 2.3 2 0 0 2 2 2 0 Sigma-70 region 3 DUF3117 PF11314.8 AID29008.1 - 0.11 12.3 0.1 0.21 11.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3117) Aminotran_1_2 PF00155.21 AID29009.1 - 1.5e-35 123.1 0.0 1.8e-35 122.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID29009.1 - 0.098 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Alliinase_C PF04864.13 AID29009.1 - 0.16 10.8 0.0 0.22 10.3 0.0 1.2 1 0 0 1 1 1 0 Allinase Sulfotransfer_3 PF13469.6 AID29010.1 - 2e-39 136.2 0.1 2e-39 136.2 0.1 2.6 3 2 0 3 3 3 1 Sulfotransferase family TPR_1 PF00515.28 AID29010.1 - 5.2e-19 67.2 8.0 0.00086 19.0 0.0 6.6 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.17 AID29010.1 - 7.8e-18 63.1 15.1 0.0042 17.1 0.0 6.8 7 0 0 7 7 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 AID29010.1 - 1.7e-15 56.4 15.7 0.009 16.8 0.1 6.9 2 1 4 6 6 6 5 Tetratricopeptide repeat TPR_8 PF13181.6 AID29010.1 - 2.4e-15 55.4 0.1 0.00041 20.3 0.0 5.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 AID29010.1 - 3.5e-14 53.1 5.9 1.4e-07 32.0 0.0 5.0 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 AID29010.1 - 4.6e-14 52.8 15.2 0.00019 22.0 0.2 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 AID29010.1 - 6.8e-14 51.2 0.0 0.13 12.7 0.0 5.0 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.6 AID29010.1 - 3.1e-12 45.6 7.8 0.00049 19.9 0.0 6.5 6 1 0 6 6 6 2 Tetratricopeptide repeat Sulfotransfer_1 PF00685.27 AID29010.1 - 5.5e-12 45.7 0.0 1.1e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Sulfotransferase domain TPR_12 PF13424.6 AID29010.1 - 7.6e-12 45.3 16.5 5e-06 26.7 0.2 6.1 4 1 2 6 6 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID29010.1 - 1.6e-11 43.7 0.3 0.017 14.8 0.0 6.1 4 1 2 6 6 6 3 TPR repeat ANAPC3 PF12895.7 AID29010.1 - 5.9e-11 42.4 0.6 0.0015 18.7 0.0 3.6 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 AID29010.1 - 1.1e-07 31.5 14.4 0.01 15.7 0.0 6.1 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.6 AID29010.1 - 5.4e-05 22.5 1.7 0.56 9.4 0.0 3.5 1 1 2 3 3 3 2 Tetratricopeptide repeat DUF3856 PF12968.7 AID29010.1 - 0.0012 18.9 0.6 0.8 9.8 0.0 3.3 2 1 1 3 3 3 1 Domain of Unknown Function (DUF3856) Sel1 PF08238.12 AID29010.1 - 0.0039 17.8 2.7 0.72 10.6 0.0 4.0 5 1 0 5 5 3 1 Sel1 repeat TPR_6 PF13174.6 AID29010.1 - 0.0046 17.5 5.9 13 6.7 0.0 5.5 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_5 PF12688.7 AID29010.1 - 0.018 15.3 0.5 0.14 12.4 0.0 2.5 2 0 0 2 2 2 0 Tetratrico peptide repeat RPN7 PF10602.9 AID29010.1 - 0.096 12.4 0.7 17 5.1 0.2 3.1 1 1 1 2 2 2 0 26S proteasome subunit RPN7 NSF PF02071.20 AID29010.1 - 0.16 12.8 0.2 1.3e+02 4.1 0.0 4.2 4 0 0 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat TPR_9 PF13371.6 AID29010.1 - 0.22 11.7 6.8 2 8.6 1.3 3.5 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID29010.1 - 0.31 11.8 13.3 12 6.9 0.0 5.9 6 0 0 6 6 4 0 Tetratricopeptide repeat Porin_2 PF02530.14 AID29011.1 - 1.4e-108 363.6 19.0 1.8e-108 363.2 19.0 1.1 1 0 0 1 1 1 1 Porin subfamily Porin_2 PF02530.14 AID29012.1 - 4.4e-74 250.0 17.0 7e-74 249.4 17.0 1.2 1 0 0 1 1 1 1 Porin subfamily YadA_anchor PF03895.15 AID29012.1 - 0.00022 21.2 1.6 0.0027 17.8 0.4 2.6 2 0 0 2 2 2 1 YadA-like membrane anchor domain Phage_integrase PF00589.22 AID29014.1 - 7.9e-27 94.1 0.1 2.5e-26 92.5 0.1 1.7 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_5 PF13102.6 AID29014.1 - 0.08 13.3 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Phage integrase SAM-like domain Phage_int_SAM_1 PF02899.17 AID29014.1 - 0.093 13.0 0.2 1.7 9.0 0.1 2.8 3 0 0 3 3 3 0 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 AID29014.1 - 0.11 12.7 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Integrase Abhydrolase_1 PF00561.20 AID29015.1 - 7e-11 42.3 0.0 4.3e-10 39.7 0.0 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29015.1 - 7e-11 43.1 3.2 9.9e-11 42.7 3.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29015.1 - 0.00019 20.8 0.0 0.00072 18.9 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 SLT PF01464.20 AID29017.1 - 1.5e-20 73.0 0.1 2.8e-20 72.1 0.1 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain TPR_19 PF14559.6 AID29017.1 - 0.27 11.8 0.0 0.27 11.8 0.0 5.3 7 1 0 7 7 7 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID29017.1 - 1.1 10.1 0.0 1.1 10.1 0.0 6.4 7 0 0 7 7 7 0 Tetratricopeptide repeat DHDPS PF00701.22 AID29018.1 - 2.5e-93 311.9 0.0 2.8e-93 311.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Amidohydro_2 PF04909.14 AID29018.1 - 0.073 12.9 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase SmpB PF01668.18 AID29019.1 - 5.9e-59 198.1 0.6 6.7e-59 197.9 0.6 1.0 1 0 0 1 1 1 1 SmpB protein Glyco_hydro_25 PF01183.20 AID29020.1 - 1.1e-35 123.4 0.0 1.5e-35 123.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 HxlR PF01638.17 AID29021.1 - 1.6e-37 127.3 0.0 1.9e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.6 AID29021.1 - 0.0033 17.6 0.0 0.0045 17.1 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.14 AID29021.1 - 0.0082 16.1 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.22 AID29021.1 - 0.0097 15.8 0.0 0.024 14.6 0.0 1.6 2 0 0 2 2 2 1 MarR family Replic_Relax PF13814.6 AID29021.1 - 0.17 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation ADH_zinc_N_2 PF13602.6 AID29022.1 - 3.2e-19 70.3 0.1 7.1e-19 69.2 0.1 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 AID29022.1 - 2.9e-11 43.5 0.0 5.3e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID29022.1 - 3.2e-05 23.8 0.0 5.7e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain TrkA_N PF02254.18 AID29022.1 - 0.1 12.8 0.0 0.26 11.6 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain UDG PF03167.19 AID29023.1 - 5.4e-24 84.9 0.0 6.6e-24 84.6 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily NYN PF01936.18 AID29024.1 - 4.7e-41 140.7 0.1 5.9e-41 140.4 0.1 1.0 1 0 0 1 1 1 1 NYN domain RNA_pol_Rpb6 PF01192.22 AID29025.1 - 2.1e-16 59.6 0.0 3.2e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 MinE PF03776.14 AID29025.1 - 0.099 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Septum formation topological specificity factor MinE HD_4 PF13328.6 AID29026.1 - 3.2e-49 166.7 1.9 6.1e-49 165.7 1.9 1.5 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 AID29026.1 - 1.8e-35 121.7 0.0 4.1e-35 120.6 0.0 1.6 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins TGS PF02824.21 AID29026.1 - 5.3e-21 74.4 0.0 1.4e-20 73.1 0.0 1.8 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 AID29026.1 - 9.6e-19 67.8 0.1 5.6e-18 65.3 0.0 2.2 2 0 0 2 2 2 1 ACT domain HD PF01966.22 AID29026.1 - 2.8e-09 37.2 2.7 3.4e-09 37.0 1.3 1.9 2 0 0 2 2 2 1 HD domain ACT PF01842.25 AID29026.1 - 0.003 17.3 0.0 0.0084 15.9 0.0 1.8 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 AID29026.1 - 0.0033 17.4 0.1 0.12 12.4 0.1 2.9 3 0 0 3 3 3 1 ACT domain ThiS PF02597.20 AID29026.1 - 0.0063 17.1 0.0 0.03 15.0 0.0 2.3 2 0 0 2 2 2 1 ThiS family DUF1800 PF08811.11 AID29026.1 - 0.12 11.3 0.0 0.2 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) Pribosyltran PF00156.27 AID29027.1 - 2.7e-21 75.8 1.4 1.6e-20 73.2 1.4 1.8 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID29027.1 - 0.052 13.0 0.0 0.077 12.4 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase CarS-like PF01864.17 AID29027.1 - 0.086 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 CDP-archaeol synthase Glyoxalase PF00903.25 AID29028.1 - 7.8e-12 45.5 0.0 1.4e-11 44.7 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID29028.1 - 0.0034 17.5 0.0 0.035 14.2 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID29028.1 - 0.011 16.5 0.0 0.031 15.0 0.0 1.7 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID29028.1 - 0.045 14.0 0.0 0.1 12.9 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF2062 PF09835.9 AID29029.1 - 3.9e-38 130.6 8.2 4.7e-38 130.4 8.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Silic_transp PF03842.13 AID29029.1 - 0.22 9.8 2.2 0.3 9.3 2.2 1.1 1 0 0 1 1 1 0 Silicon transporter ACPS PF01648.20 AID29030.1 - 1.3e-15 57.5 0.0 1.5e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Peptidase_S24 PF00717.23 AID29031.1 - 1.6e-21 76.0 0.0 3e-21 75.2 0.0 1.5 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 AID29031.1 - 2.9e-10 40.1 0.3 0.00029 20.6 0.0 2.5 1 1 1 2 2 2 2 Signal peptidase, peptidase S26 Ribonucleas_3_3 PF14622.6 AID29032.1 - 3.7e-26 91.8 0.0 5.1e-26 91.3 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 AID29032.1 - 6.9e-16 58.8 0.0 2.1e-15 57.2 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 AID29032.1 - 7.6e-15 55.4 0.0 1.2e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 AID29032.1 - 0.0043 17.3 0.1 0.013 15.7 0.1 1.8 1 1 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 MMR_HSR1 PF01926.23 AID29033.1 - 3.2e-24 85.2 0.1 5.1e-24 84.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase KH_2 PF07650.17 AID29033.1 - 7.3e-18 64.2 0.4 1.5e-17 63.1 0.4 1.6 1 0 0 1 1 1 1 KH domain FeoB_N PF02421.18 AID29033.1 - 6.6e-14 51.7 0.0 1e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 AID29033.1 - 1.2e-13 51.0 0.1 1.1e-10 41.4 0.1 2.5 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 AID29033.1 - 1.1e-10 41.8 1.6 8.2e-05 22.7 0.3 2.5 2 1 1 3 3 3 2 Dynamin family PduV-EutP PF10662.9 AID29033.1 - 3.6e-09 36.5 0.0 8.5e-09 35.3 0.0 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AIG1 PF04548.16 AID29033.1 - 1.3e-06 27.9 0.0 1.9e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 AIG1 family RsgA_GTPase PF03193.16 AID29033.1 - 2.1e-06 27.8 0.2 0.0011 18.9 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase cobW PF02492.19 AID29033.1 - 1.7e-05 24.5 0.5 0.0009 18.9 0.1 2.3 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 AID29033.1 - 0.0024 18.3 1.1 0.032 14.6 0.2 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 AID29033.1 - 0.0058 16.9 0.1 0.042 14.1 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID29033.1 - 0.012 15.9 0.0 0.026 14.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain SRPRB PF09439.10 AID29033.1 - 0.013 15.0 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit ABC_tran PF00005.27 AID29033.1 - 0.028 14.9 0.1 0.28 11.7 0.0 2.3 2 2 1 3 3 3 0 ABC transporter Roc PF08477.13 AID29033.1 - 0.056 13.7 0.1 0.14 12.4 0.1 1.8 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 AID29033.1 - 0.084 12.6 0.0 0.25 11.1 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1_Xtn PF16897.5 AID29033.1 - 0.091 12.8 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Arf PF00025.21 AID29033.1 - 0.097 12.1 0.1 4.2 6.8 0.0 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_25 PF13481.6 AID29033.1 - 0.099 12.2 1.0 0.32 10.5 1.0 1.9 1 1 0 1 1 1 0 AAA domain Trans_reg_C PF00486.28 AID29034.1 - 5.1e-15 55.3 0.0 1.1e-14 54.3 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal TPR_2 PF07719.17 AID29034.1 - 7.7e-10 38.1 16.6 0.33 11.2 0.0 6.7 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.6 AID29034.1 - 5.2e-09 36.5 15.0 0.00088 19.7 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 AID29034.1 - 6.7e-08 32.0 6.7 0.58 10.1 0.0 5.9 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID29034.1 - 4.3e-07 30.5 26.2 0.035 14.8 0.4 5.9 4 2 1 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 AID29034.1 - 1.2e-05 24.9 5.1 0.11 12.3 0.1 4.6 5 0 0 5 5 5 2 TPR repeat TPR_17 PF13431.6 AID29034.1 - 1.5e-05 25.1 2.2 0.65 10.5 0.0 5.1 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID29034.1 - 4.2e-05 24.0 33.7 0.09 13.6 1.2 7.2 3 1 4 7 7 6 3 Tetratricopeptide repeat TolB_N PF04052.13 AID29034.1 - 0.00023 21.3 0.1 0.00047 20.3 0.1 1.5 1 0 0 1 1 1 1 TolB amino-terminal domain TPR_8 PF13181.6 AID29034.1 - 0.0071 16.5 3.1 23 5.5 0.0 4.7 5 0 0 5 5 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 AID29034.1 - 0.0084 16.3 2.2 0.32 11.3 0.1 3.1 1 1 2 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 AID29034.1 - 0.0095 15.9 2.2 3.4 7.9 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 AID29034.1 - 0.016 15.5 20.5 0.25 11.6 3.2 4.9 2 1 3 5 5 5 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 AID29034.1 - 0.031 14.2 5.2 2.9 7.8 0.1 3.2 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal TPR_9 PF13371.6 AID29034.1 - 0.036 14.2 23.5 0.29 11.3 2.0 5.2 2 1 2 5 5 5 0 Tetratricopeptide repeat LpoB PF13036.6 AID29034.1 - 0.059 13.3 0.0 0.56 10.1 0.0 2.1 1 1 0 1 1 1 0 Peptidoglycan-synthase activator LpoB CadC_C1 PF18500.1 AID29034.1 - 0.21 11.7 0.0 0.37 10.9 0.0 1.4 1 0 0 1 1 1 0 CadC C-terminal domain 1 CPBP PF02517.16 AID29035.1 - 1.5e-16 60.6 3.5 1.5e-16 60.6 3.5 2.7 3 1 0 3 3 3 1 CPBP intramembrane metalloprotease EIID-AGA PF03613.14 AID29035.1 - 0.18 10.9 7.5 0.24 10.6 0.5 2.6 2 1 0 2 2 2 0 PTS system mannose/fructose/sorbose family IID component Porin_2 PF02530.14 AID29037.1 - 1.4e-115 386.7 20.1 1.6e-115 386.4 20.1 1.0 1 0 0 1 1 1 1 Porin subfamily KdgM PF06178.13 AID29037.1 - 0.02 14.6 4.2 0.12 12.0 0.4 2.8 3 0 0 3 3 3 0 Oligogalacturonate-specific porin protein (KdgM) RecO_C PF02565.15 AID29038.1 - 3.6e-27 95.1 0.0 5.7e-27 94.4 0.0 1.3 1 0 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 AID29038.1 - 9.8e-20 70.3 0.0 1.5e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 Recombination protein O N terminal RecO_N_2 PF13114.6 AID29038.1 - 0.024 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 RecO N terminal DUF2339 PF10101.9 AID29039.1 - 2.6e-122 409.6 141.9 1.3e-120 404.0 141.9 2.2 1 1 0 1 1 1 1 Predicted membrane protein (DUF2339) Sigma70_r2 PF04542.14 AID29040.1 - 4e-16 58.5 1.1 1.2e-15 57.1 1.1 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID29040.1 - 9.6e-14 50.8 0.1 2e-13 49.8 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID29040.1 - 5e-07 29.1 0.0 1.1e-06 28.1 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID29040.1 - 0.00093 19.1 0.6 0.0013 18.7 0.6 1.3 1 0 0 1 1 1 1 ECF sigma factor HTH_psq PF05225.16 AID29040.1 - 0.0015 18.2 0.0 0.0039 16.9 0.0 1.8 1 0 0 1 1 1 1 helix-turn-helix, Psq domain HTH_28 PF13518.6 AID29040.1 - 0.018 15.2 2.2 0.023 14.8 0.4 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 AID29040.1 - 0.03 14.1 0.0 0.095 12.5 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_1 PF00126.27 AID29040.1 - 0.049 13.6 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID29040.1 - 0.081 12.7 0.1 0.081 12.7 0.1 2.0 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain NepR PF18557.1 AID29041.1 - 0.0063 16.1 0.1 0.028 14.1 0.0 2.0 2 0 0 2 2 2 1 Anti-sigma factor NepR DUF3379 PF11859.8 AID29041.1 - 0.007 15.7 0.0 0.015 14.6 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3379) DUF4880 PF16220.5 AID29041.1 - 0.015 15.2 0.3 0.015 15.2 0.3 3.1 4 0 0 4 4 4 0 Domain of unknown function (DUF4880) RskA PF10099.9 AID29041.1 - 0.43 10.8 8.9 0.88 9.8 8.7 1.8 1 1 0 1 1 1 0 Anti-sigma-K factor rskA DUF3335 PF11814.8 AID29042.1 - 5.2e-78 261.2 0.0 6.7e-78 260.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase_C39 like family Acetyltransf_1 PF00583.25 AID29042.1 - 2.7e-16 59.8 0.3 6.3e-16 58.7 0.1 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID29042.1 - 3.3e-13 49.7 0.0 5.5e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID29042.1 - 1e-07 32.3 0.1 2e-07 31.3 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Peptidase_C70 PF12385.8 AID29042.1 - 1.2e-06 28.5 0.1 0.00029 20.9 0.0 2.3 2 0 0 2 2 2 1 Papain-like cysteine protease AvrRpt2 Peptidase_C39_2 PF13529.6 AID29042.1 - 0.00024 21.7 0.0 0.41 11.2 0.0 2.2 2 0 0 2 2 2 2 Peptidase_C39 like family FR47 PF08445.10 AID29042.1 - 0.00034 20.5 0.0 0.003 17.5 0.0 2.1 2 0 0 2 2 2 1 FR47-like protein Guanylate_cyc_2 PF09778.9 AID29042.1 - 0.00085 18.7 0.2 0.1 11.9 0.0 2.4 2 1 0 2 2 2 1 Guanylylate cyclase Acetyltransf_8 PF13523.6 AID29042.1 - 0.0033 17.1 0.0 0.031 14.0 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Peptidase_C39 PF03412.15 AID29042.1 - 0.0042 16.9 0.0 0.58 10.0 0.0 2.2 2 0 0 2 2 2 1 Peptidase C39 family Acetyltransf_6 PF13480.7 AID29042.1 - 0.021 15.0 1.4 0.053 13.7 1.2 1.8 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID29042.1 - 0.075 13.7 0.0 0.18 12.5 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID29042.1 - 0.14 12.3 0.2 0.6 10.2 0.1 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain RLAN PF14401.6 AID29043.1 - 1.4e-39 135.1 0.0 2.6e-39 134.3 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATPgrasp N-terminal domain RimK PF08443.11 AID29043.1 - 1.1e-10 41.4 0.0 2.9e-10 40.1 0.0 1.6 1 1 0 1 1 1 1 RimK-like ATP-grasp domain R2K_3 PF14243.6 AID29043.1 - 8.6e-08 32.4 0.0 1.7e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 Dala_Dala_lig_C PF07478.13 AID29043.1 - 4.1e-06 26.5 0.0 6.4e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 AID29043.1 - 3.9e-05 23.7 0.0 6.6e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 AID29043.1 - 0.0018 17.9 0.0 0.0039 16.8 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 AID29043.1 - 0.055 12.7 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 AID29043.1 - 0.13 11.9 0.0 0.5 9.9 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain PRTP PF01366.18 AID29043.1 - 0.27 9.3 0.0 0.4 8.7 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus processing and transport protein DUF3303 PF11746.8 AID29044.1 - 4.4e-20 71.7 0.1 4.8e-20 71.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) LysR_substrate PF03466.20 AID29045.1 - 1.2e-25 90.1 3.6 2.1e-25 89.3 3.6 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29045.1 - 6.7e-19 67.6 2.8 6.7e-19 67.6 2.8 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID29045.1 - 4.1 7.6 5.3 2.7 8.2 0.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain FA_desaturase PF00487.24 AID29046.1 - 6e-35 121.3 20.0 8e-35 120.9 20.0 1.1 1 0 0 1 1 1 1 Fatty acid desaturase CaKB PF03185.15 AID29046.1 - 0.19 11.4 0.6 0.33 10.6 0.6 1.3 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit EAL PF00563.20 AID29047.1 - 1.4e-72 244.0 0.0 5.1e-72 242.2 0.0 1.9 2 0 0 2 2 2 1 EAL domain PAS_7 PF12860.7 AID29047.1 - 2e-59 198.8 0.0 1.6e-29 102.4 0.0 2.4 2 0 0 2 2 2 2 PAS fold GGDEF PF00990.21 AID29047.1 - 4.8e-50 169.5 0.0 1.1e-49 168.2 0.0 1.7 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_4 PF08448.10 AID29047.1 - 2.5e-07 30.9 0.1 0.033 14.4 0.1 3.3 2 1 0 2 2 2 2 PAS fold PAS_8 PF13188.7 AID29047.1 - 5.1e-07 29.6 0.9 0.015 15.3 0.0 3.4 3 0 0 3 3 3 2 PAS domain PAS PF00989.25 AID29047.1 - 0.0037 17.3 0.1 4.2 7.4 0.0 3.7 3 0 0 3 3 3 1 PAS fold GGDEF_2 PF17853.1 AID29047.1 - 0.079 13.2 0.1 0.57 10.5 0.1 2.6 1 1 0 1 1 1 0 GGDEF-like domain DUF3763 PF12592.8 AID29047.1 - 0.16 12.0 1.0 14 5.8 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3763) VPS11_C PF12451.8 AID29047.1 - 0.25 11.6 7.7 0.32 11.3 0.6 2.9 3 0 0 3 3 3 0 Vacuolar protein sorting protein 11 C terminal HD_2 PF12917.7 AID29048.1 - 4.7e-07 29.7 0.1 5.9e-06 26.1 0.1 2.1 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme HD_3 PF13023.6 AID29048.1 - 3.5e-05 23.8 0.0 4.6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 HD domain HD PF01966.22 AID29048.1 - 0.036 14.3 0.9 0.17 12.1 0.9 2.0 1 1 0 1 1 1 0 HD domain GCV_T PF01571.21 AID29049.1 - 1e-10 41.5 0.0 2.1e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SoxG PF04268.12 AID29049.1 - 0.007 16.5 0.0 0.019 15.1 0.0 1.7 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family Amidohydro_1 PF01979.20 AID29050.1 - 1.5e-21 77.1 0.0 5.1e-20 72.1 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID29050.1 - 6.5e-08 32.5 2.8 4.6e-06 26.4 0.2 2.7 3 1 0 3 3 3 2 Amidohydrolase family Urease_alpha PF00449.20 AID29050.1 - 0.0016 18.8 0.2 0.0041 17.4 0.2 1.7 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain FAP PF07174.11 AID29051.1 - 0.0012 18.4 11.2 0.0017 17.9 11.2 1.1 1 0 0 1 1 1 1 Fibronectin-attachment protein (FAP) Med15 PF09606.10 AID29051.1 - 0.58 8.8 2.4 0.74 8.4 2.4 1.0 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal DUF2385 PF09539.10 AID29053.1 - 1.3e-36 125.0 0.0 1.4e-36 124.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2385) NUDIX PF00293.28 AID29054.1 - 5.8e-17 62.0 0.0 6.7e-17 61.8 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 AID29054.1 - 2e-05 24.5 0.0 4.5e-05 23.4 0.0 1.6 1 1 0 1 1 1 1 NUDIX domain SRAP PF02586.14 AID29055.1 - 2e-59 200.8 0.0 2.3e-59 200.6 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) tRNA-synt_1e PF01406.19 AID29057.1 - 1.6e-109 365.9 0.0 2e-109 365.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 AID29057.1 - 1.9e-05 23.1 0.0 0.00023 19.6 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 AID29057.1 - 0.00036 19.4 0.1 0.0077 15.0 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (M) PT-TG PF14449.6 AID29057.1 - 0.026 14.4 0.2 0.07 13.0 0.2 1.7 1 0 0 1 1 1 0 Pre-toxin TG tRNA-synt_1f PF01921.18 AID29057.1 - 0.033 13.1 0.0 1.1 8.0 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) DUF559 PF04480.12 AID29058.1 - 3.7e-37 126.5 0.2 4.5e-37 126.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 AID29058.1 - 2.8e-12 46.6 0.2 3.4e-12 46.4 0.2 1.1 1 0 0 1 1 1 1 REase_MTES_1575 Glyoxalase PF00903.25 AID29059.1 - 8.5e-10 38.9 0.2 1.1e-09 38.6 0.2 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFA PF04828.14 AID29060.1 - 3.8e-17 62.4 0.0 5.3e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.6 AID29060.1 - 0.038 13.9 0.2 0.038 13.9 0.2 2.7 4 0 0 4 4 4 0 Nudix N-terminal GFA PF04828.14 AID29061.1 - 5e-12 46.0 0.0 6.4e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.6 AID29061.1 - 0.011 15.6 0.3 0.018 14.9 0.3 1.3 1 0 0 1 1 1 0 Nudix N-terminal zf-NADH-PPase PF09297.11 AID29061.1 - 0.049 13.3 1.0 0.085 12.5 1.0 1.4 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Abhydrolase_1 PF00561.20 AID29062.1 - 5.1e-27 95.1 0.0 7.3e-27 94.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29062.1 - 3.4e-11 44.2 4.8 4.5e-11 43.8 4.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29062.1 - 1.8e-09 37.3 0.0 1.3e-08 34.4 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 HMGL-like PF00682.19 AID29063.1 - 7.4e-47 160.1 0.0 1e-46 159.6 0.0 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 AID29063.1 - 9.1e-28 96.8 0.0 2e-27 95.7 0.0 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain EamA PF00892.20 AID29064.1 - 3.2e-12 46.8 37.2 4.1e-08 33.5 13.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family RseC_MucC PF04246.12 AID29064.1 - 4.6 7.2 14.4 2.3 8.2 1.7 2.9 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC CorA PF01544.18 AID29065.1 - 5.2e-63 213.1 0.0 6.1e-63 212.9 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Phage_holin_3_6 PF07332.11 AID29065.1 - 0.049 13.7 1.4 0.087 12.9 1.4 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III MIase PF02426.16 AID29066.1 - 1.4e-07 31.6 0.0 1.5e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 Muconolactone delta-isomerase YCII PF03795.14 AID29066.1 - 0.035 14.5 0.0 0.037 14.4 0.0 1.3 1 1 0 1 1 1 0 YCII-related domain HSP33 PF01430.19 AID29066.1 - 0.16 11.3 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Hsp33 protein LysR_substrate PF03466.20 AID29067.1 - 1.3e-33 116.1 5.8 1.8e-33 115.7 5.8 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29067.1 - 3.7e-21 74.8 0.7 3.7e-21 74.8 0.7 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID29067.1 - 0.00094 18.9 0.9 0.0021 17.8 0.1 2.0 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_28 PF13518.6 AID29067.1 - 0.016 15.3 0.4 1.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 AID29067.1 - 0.043 13.4 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Lysine_decarbox PF03641.14 AID29068.1 - 5.4e-44 149.5 0.2 6.7e-44 149.2 0.2 1.1 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 AID29068.1 - 2e-17 63.2 0.1 2.7e-17 62.8 0.1 1.2 1 0 0 1 1 1 1 SLOG cluster4 family LysM PF01476.20 AID29069.1 - 5.4e-11 42.4 0.0 9e-11 41.7 0.0 1.4 1 0 0 1 1 1 1 LysM domain PriCT_1 PF08708.11 AID29069.1 - 0.081 12.7 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) Flavodoxin_2 PF02525.17 AID29070.1 - 1.5e-56 191.3 0.0 1.7e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 AID29070.1 - 7e-11 42.1 0.0 1.4e-10 41.1 0.0 1.4 1 1 0 1 1 1 1 NADPH-dependent FMN reductase LysR_substrate PF03466.20 AID29071.1 - 1.4e-36 125.9 7.7 2e-36 125.3 7.7 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29071.1 - 3.3e-19 68.6 1.5 6.4e-19 67.7 1.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID29071.1 - 0.00042 20.1 0.9 0.0091 15.9 0.2 2.9 2 0 0 2 2 2 1 MarR family HTH_30 PF13556.6 AID29071.1 - 0.0014 18.4 0.2 0.0037 17.0 0.1 1.8 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_38 PF13936.6 AID29071.1 - 0.0018 18.0 0.1 0.0059 16.3 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 AID29071.1 - 0.0024 17.9 3.6 0.0028 17.7 0.2 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_23 PF13384.6 AID29071.1 - 0.004 16.9 0.0 0.012 15.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 AID29071.1 - 0.0044 16.8 0.7 0.068 13.0 0.1 2.9 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID29071.1 - 0.0067 16.0 0.1 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 AID29071.1 - 0.0099 16.0 0.1 0.029 14.5 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID29071.1 - 0.018 14.4 0.1 0.048 13.1 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_5 PF01022.20 AID29071.1 - 0.037 13.9 0.0 0.26 11.2 0.0 2.4 3 0 0 3 3 2 0 Bacterial regulatory protein, arsR family HTH_6 PF01418.17 AID29071.1 - 0.072 13.1 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FtsK_gamma PF09397.10 AID29071.1 - 0.086 12.7 0.1 0.17 11.7 0.1 1.5 1 0 0 1 1 1 0 Ftsk gamma domain HTH_10 PF04967.12 AID29071.1 - 0.1 12.4 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain MarR PF01047.22 AID29071.1 - 0.11 12.5 0.0 0.31 11.0 0.0 1.8 1 0 0 1 1 1 0 MarR family TetR_N PF00440.23 AID29071.1 - 0.15 11.8 0.4 0.51 10.2 0.1 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, tetR family HTH_20 PF12840.7 AID29072.1 - 2.5e-15 56.3 0.2 4.2e-15 55.6 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID29072.1 - 4.8e-14 52.0 0.5 1.2e-13 50.6 0.4 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 AID29072.1 - 5.3e-07 29.1 0.0 8.5e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID29072.1 - 1.5e-06 28.0 0.1 2.8e-06 27.1 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID29072.1 - 4e-05 23.3 0.0 8.6e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain RP-C PF03428.13 AID29072.1 - 0.00023 20.9 0.0 0.00037 20.2 0.0 1.4 1 0 0 1 1 1 1 Replication protein C N-terminal domain MarR PF01047.22 AID29072.1 - 0.00062 19.6 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.16 AID29072.1 - 0.0029 17.9 0.0 0.0037 17.6 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor DUF2250 PF10007.9 AID29072.1 - 0.0036 17.4 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_27 PF13463.6 AID29072.1 - 0.0079 16.7 0.1 0.017 15.6 0.1 1.6 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 AID29072.1 - 0.0087 15.8 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain F-box PF00646.33 AID29072.1 - 0.012 15.5 2.5 1.7 8.6 0.2 2.7 3 0 0 3 3 3 0 F-box domain TrmB PF01978.19 AID29072.1 - 0.015 15.2 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB BLACT_WH PF17778.1 AID29072.1 - 0.018 15.0 0.3 0.075 13.0 0.0 2.0 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain LexA_DNA_bind PF01726.16 AID29072.1 - 0.02 14.7 0.0 0.056 13.2 0.0 1.6 1 1 0 1 1 1 0 LexA DNA binding domain HTH_34 PF13601.6 AID29072.1 - 0.023 14.9 0.0 0.04 14.1 0.0 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 AID29072.1 - 0.064 13.5 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF2513 PF10711.9 AID29072.1 - 0.076 13.3 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) Arg_repressor PF01316.21 AID29072.1 - 0.083 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain ABC_tran PF00005.27 AID29073.1 - 1.3e-33 116.4 0.0 2.3e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID29073.1 - 2.1e-30 106.3 5.2 2.6e-30 106.0 5.2 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID29073.1 - 2.7e-08 33.5 0.4 3e-06 26.8 0.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID29073.1 - 0.0008 19.8 0.1 0.0022 18.4 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID29073.1 - 0.0018 18.5 0.0 0.026 14.8 0.0 2.4 3 0 0 3 3 2 1 AAA domain AAA_29 PF13555.6 AID29073.1 - 0.0054 16.4 0.1 0.016 14.9 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID29073.1 - 0.008 16.1 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 AID29073.1 - 0.013 15.1 0.0 0.039 13.5 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID29073.1 - 0.027 14.9 0.0 0.78 10.2 0.0 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 AID29073.1 - 0.027 14.2 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID29073.1 - 0.03 14.2 0.0 0.057 13.3 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_18 PF13238.6 AID29073.1 - 0.035 14.7 0.0 0.084 13.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID29073.1 - 0.035 14.2 0.0 0.081 13.0 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase Cytidylate_kin PF02224.18 AID29073.1 - 0.039 13.7 0.0 0.074 12.8 0.0 1.5 1 0 0 1 1 1 0 Cytidylate kinase AAA_23 PF13476.6 AID29073.1 - 0.052 14.0 0.0 0.23 11.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID29073.1 - 0.054 13.6 0.0 0.35 11.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID29073.1 - 0.069 11.9 0.0 0.4 9.4 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_10 PF12846.7 AID29073.1 - 0.076 11.9 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain Zeta_toxin PF06414.12 AID29073.1 - 0.078 12.2 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 AID29073.1 - 0.099 12.4 0.5 4 7.1 0.0 2.8 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_21 PF13304.6 AID29073.1 - 0.1 12.4 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Guanylate_kin PF00625.21 AID29073.1 - 0.14 11.8 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Guanylate kinase SbcCD_C PF13558.6 AID29073.1 - 0.19 12.0 0.4 3.8 7.8 0.4 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Benyvirus_P25 PF05744.11 AID29074.1 - 0.0003 20.1 0.0 0.00034 20.0 0.0 1.1 1 0 0 1 1 1 1 Benyvirus P25/P26 protein ABM PF03992.16 AID29074.1 - 0.0036 17.4 0.1 0.0049 16.9 0.1 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SGL PF08450.12 AID29075.1 - 6e-49 166.8 0.1 7.3e-49 166.6 0.1 1.1 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF4915 PF16261.5 AID29075.1 - 2.8e-07 30.1 0.0 7.2e-07 28.7 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4915) Str_synth PF03088.16 AID29075.1 - 0.0028 17.7 0.0 0.0086 16.2 0.0 1.8 2 0 0 2 2 2 1 Strictosidine synthase NHL PF01436.21 AID29075.1 - 0.0047 16.9 3.9 11 6.2 0.0 4.8 5 0 0 5 5 5 2 NHL repeat Arylesterase PF01731.20 AID29075.1 - 0.058 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Arylesterase PS_Dcarbxylase PF02666.15 AID29076.1 - 5.5e-33 114.2 0.1 5.1e-32 111.1 0.1 1.9 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase CDP-OH_P_transf PF01066.21 AID29078.1 - 8.1e-14 52.1 1.0 8.1e-14 52.1 1.0 3.1 3 2 0 3 3 3 1 CDP-alcohol phosphatidyltransferase CDP-OH_P_tran_2 PF08009.11 AID29078.1 - 2.5e-08 33.7 12.8 2.5e-08 33.7 12.8 4.0 5 0 0 5 5 5 1 CDP-alcohol phosphatidyltransferase 2 PRA1 PF03208.19 AID29078.1 - 6.2 6.4 9.7 1.2 8.7 5.2 2.1 1 1 1 2 2 2 0 PRA1 family protein DUF2070 PF09843.9 AID29078.1 - 6.5 4.9 9.8 3.4 5.8 7.7 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) AMP-binding PF00501.28 AID29079.1 - 6.1e-12 44.8 0.1 1.1e-11 44.1 0.1 1.4 2 0 0 2 2 2 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID29079.1 - 4.5e-06 27.5 0.2 7.6e-06 26.8 0.2 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 AID29080.1 - 6.5e-31 107.4 0.0 8.8e-31 106.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF2723 PF11028.8 AID29080.1 - 0.11 12.5 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) Tautomerase PF01361.21 AID29081.1 - 1.8e-18 66.2 0.0 8.6e-15 54.4 0.0 2.1 2 0 0 2 2 2 2 Tautomerase enzyme LysR_substrate PF03466.20 AID29082.1 - 1.7e-25 89.6 6.8 3e-25 88.8 6.8 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29082.1 - 3.6e-16 58.9 0.0 1e-15 57.4 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID29082.1 - 0.003 17.3 0.0 0.0077 16.0 0.0 1.7 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain SBP_bac_11 PF13531.6 AID29082.1 - 0.029 14.1 4.7 0.13 12.0 0.0 2.8 1 1 2 3 3 3 0 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 AID29082.1 - 0.072 12.8 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 PBP superfamily domain EamA PF00892.20 AID29083.1 - 3e-24 85.7 36.2 3e-16 59.9 14.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 AID29083.1 - 0.00063 19.3 3.5 0.00063 19.3 3.5 1.9 2 1 0 2 2 2 1 Solute carrier family 35 CRT-like PF08627.10 AID29083.1 - 0.071 12.0 1.7 0.96 8.3 0.1 2.1 2 0 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 AID29084.1 - 6e-19 68.6 39.3 1.4e-09 38.2 17.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family E1-E2_ATPase PF00122.20 AID29084.1 - 5.2 6.6 6.2 9.7 5.7 5.3 2.0 1 1 0 1 1 1 0 E1-E2 ATPase WG_beta_rep PF14903.6 AID29085.1 - 9.7e-18 64.2 3.9 4.3e-09 36.5 0.1 6.0 6 1 1 7 7 7 3 WG containing repeat WG_beta_rep PF14903.6 AID29086.1 - 6.7e-33 112.6 2.5 8.9e-08 32.3 0.1 5.3 4 1 1 5 5 5 5 WG containing repeat Cuticle_1 PF08140.11 AID29086.1 - 0.029 14.4 0.3 0.26 11.3 0.2 2.5 2 0 0 2 2 2 0 Crustacean cuticle protein repeat OsmC PF02566.19 AID29087.1 - 6.4e-17 61.9 0.0 1.1e-16 61.2 0.0 1.3 1 0 0 1 1 1 1 OsmC-like protein Endostatin PF06482.11 AID29089.1 - 8.6e-05 22.1 0.0 0.00013 21.5 0.0 1.3 1 0 0 1 1 1 1 Collagenase NC10 and Endostatin DUF1554 PF07588.11 AID29089.1 - 0.002 17.9 1.1 0.03 14.1 1.1 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1554) adh_short PF00106.25 AID29090.1 - 1.3e-49 168.3 0.2 1.5e-49 168.1 0.2 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID29090.1 - 1.4e-38 132.8 1.1 2.2e-38 132.1 1.1 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID29090.1 - 2e-11 44.1 0.6 2.8e-11 43.7 0.6 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID29090.1 - 5.9e-05 22.6 1.9 0.00068 19.2 1.9 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Ribosomal_S11 PF00411.19 AID29090.1 - 0.011 16.2 1.2 0.037 14.4 0.1 2.0 2 0 0 2 2 2 0 Ribosomal protein S11 GDP_Man_Dehyd PF16363.5 AID29090.1 - 0.013 14.9 0.5 2.8 7.3 0.1 2.3 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 AID29090.1 - 0.029 14.3 1.1 0.031 14.2 0.3 1.6 2 0 0 2 2 2 0 NAD(P)H-binding DUF1776 PF08643.10 AID29090.1 - 0.16 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) GATase_7 PF13537.6 AID29091.1 - 4.2e-20 71.9 0.0 7.3e-20 71.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AID29091.1 - 3e-19 69.5 0.0 5.5e-19 68.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 AID29091.1 - 7.9e-08 32.0 0.1 1.6e-07 31.0 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 AID29091.1 - 1.4e-06 27.4 0.1 2.3e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PRTase_2 PF15609.6 AID29091.1 - 0.027 14.0 0.0 0.052 13.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase Colicin_V PF02674.16 AID29092.1 - 1.1e-28 100.0 11.1 1.4e-28 99.7 11.1 1.0 1 0 0 1 1 1 1 Colicin V production protein DUF2070 PF09843.9 AID29092.1 - 3.1 6.0 7.0 3.8 5.7 7.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1056 PF06341.11 AID29092.1 - 5.2 7.4 8.3 0.64 10.4 1.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1056) ATPase PF06745.13 AID29093.1 - 4.4e-17 62.2 0.0 7.9e-14 51.6 0.0 2.1 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 AID29093.1 - 4.5e-16 59.0 2.1 2.2e-15 56.8 2.1 2.1 1 1 0 1 1 1 1 AAA domain Rubredoxin_2 PF18073.1 AID29093.1 - 9.5e-12 44.4 4.7 9.5e-12 44.4 4.7 1.6 2 0 0 2 2 2 1 Rubredoxin metal binding domain ChlI PF13541.6 AID29093.1 - 2.1e-08 34.1 0.0 5.4e-08 32.7 0.0 1.7 2 0 0 2 2 1 1 Subunit ChlI of Mg-chelatase AAA_16 PF13191.6 AID29093.1 - 3.1e-06 27.7 0.3 7.6e-06 26.4 0.3 1.6 1 0 0 1 1 1 1 AAA ATPase domain Lon_C PF05362.13 AID29093.1 - 1.4e-05 24.7 0.0 3e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_30 PF13604.6 AID29093.1 - 4.4e-05 23.3 3.7 0.00017 21.3 3.7 1.8 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 AID29093.1 - 6.2e-05 22.5 0.0 0.00014 21.3 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA PF00004.29 AID29093.1 - 0.00055 20.4 0.0 0.0009 19.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 AID29093.1 - 0.00073 19.3 0.5 0.0049 16.6 0.5 2.0 1 1 0 1 1 1 1 IstB-like ATP binding protein RecA PF00154.21 AID29093.1 - 0.00085 18.9 1.4 0.0013 18.3 1.4 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.6 AID29093.1 - 0.00092 19.0 0.0 0.005 16.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 AID29093.1 - 0.0035 17.3 0.2 0.017 15.0 0.0 2.1 2 1 0 2 2 2 1 NTPase MeaB PF03308.16 AID29093.1 - 0.0061 15.6 0.3 0.014 14.4 0.3 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 AID29093.1 - 0.0068 16.3 0.1 0.014 15.3 0.1 1.5 1 1 0 1 1 1 1 NACHT domain AAA_5 PF07728.14 AID29093.1 - 0.0078 16.2 0.0 0.029 14.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) HepII_C PF18675.1 AID29093.1 - 0.0079 16.3 0.1 0.034 14.2 0.0 2.0 1 1 1 2 2 2 1 Heparinase II C-terminal domain AAA_14 PF13173.6 AID29093.1 - 0.017 15.2 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 AID29093.1 - 0.025 14.6 0.1 0.041 13.9 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 AID29093.1 - 0.029 13.7 0.1 0.056 12.7 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 AID29093.1 - 0.032 14.5 0.0 0.071 13.4 0.0 1.6 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 AID29093.1 - 0.061 12.5 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) HypA PF01155.19 AID29093.1 - 0.098 12.7 0.7 0.18 11.8 0.7 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MCM PF00493.23 AID29093.1 - 0.11 11.6 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain SRP54 PF00448.22 AID29093.1 - 0.14 11.7 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 AID29093.1 - 0.17 12.2 0.2 0.29 11.5 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID29093.1 - 0.18 11.6 0.2 0.56 10.0 0.2 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain DAP3 PF10236.9 AID29093.1 - 0.2 10.8 0.1 0.36 9.9 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 ArsA_ATPase PF02374.15 AID29093.1 - 0.26 10.4 0.1 0.44 9.7 0.1 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase HEAT_2 PF13646.6 AID29094.1 - 0.02 15.3 0.4 0.88 10.0 0.1 2.1 1 1 1 2 2 2 0 HEAT repeats Glyco_hydro_88 PF07470.13 AID29094.1 - 0.07 12.2 0.0 0.083 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 DnaB_C PF03796.15 AID29095.1 - 7.8e-104 346.5 0.8 9.9e-104 346.2 0.8 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 AID29095.1 - 4.9e-26 90.8 0.0 9.2e-26 89.9 0.0 1.5 1 0 0 1 1 1 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 AID29095.1 - 1.6e-13 50.7 0.0 2.9e-13 49.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 AID29095.1 - 0.00024 21.0 0.0 0.00044 20.2 0.0 1.5 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 AID29095.1 - 0.0005 20.5 0.5 0.0035 17.8 0.5 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 AID29095.1 - 0.0011 18.3 2.1 0.0048 16.3 0.0 2.6 3 1 0 3 3 3 1 KaiC AAA_16 PF13191.6 AID29095.1 - 0.0022 18.4 0.2 0.0048 17.3 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 AID29095.1 - 0.0078 16.0 0.0 0.032 14.0 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 AID29095.1 - 0.0089 15.8 0.6 0.5 10.1 0.6 2.4 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 AID29095.1 - 0.024 13.9 0.1 0.38 10.0 0.0 2.4 2 1 0 2 2 2 0 Rad51 DUF2075 PF09848.9 AID29095.1 - 0.043 13.1 0.1 0.065 12.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Lipase PF00151.19 AID29095.1 - 0.063 12.6 0.0 0.096 12.0 0.0 1.2 1 0 0 1 1 1 0 Lipase AAA_22 PF13401.6 AID29095.1 - 0.064 13.5 0.2 0.41 10.9 0.2 2.2 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID29095.1 - 0.074 12.8 0.0 0.4 10.4 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 AID29095.1 - 0.075 12.9 0.1 0.51 10.2 0.1 2.3 1 1 0 1 1 1 0 NTPase NB-ARC PF00931.22 AID29095.1 - 0.12 11.5 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Sigma70_r4_2 PF08281.12 AID29096.1 - 3.5e-09 36.2 0.0 9.8e-09 34.8 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 AID29096.1 - 2.5e-06 27.2 1.4 5.8e-06 26.0 1.4 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID29096.1 - 0.00026 20.5 0.1 0.001 18.5 0.0 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 TPR_21 PF09976.9 AID29096.1 - 0.0043 16.8 1.8 0.0043 16.8 1.8 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat-like domain TPR_8 PF13181.6 AID29096.1 - 0.099 12.9 0.6 0.27 11.5 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_23 PF13384.6 AID29096.1 - 0.21 11.5 6.2 0.72 9.7 0.4 3.2 3 0 0 3 3 3 0 Homeodomain-like domain TPR_12 PF13424.6 AID29096.1 - 0.31 11.4 13.2 0.44 10.9 1.9 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 AID29096.1 - 0.38 11.0 5.2 0.11 12.6 0.7 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat YCII PF03795.14 AID29097.1 - 1.1e-29 102.7 0.0 1.2e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain DUF1428 PF07237.11 AID29098.1 - 7.6e-76 250.8 3.9 7.8e-38 128.8 0.4 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF1428) TraQ PF09679.10 AID29098.1 - 0.09 12.7 0.4 1.1 9.3 0.1 2.3 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) Rsm22 PF09243.10 AID29099.1 - 3.2e-117 390.7 0.0 3.8e-117 390.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_25 PF13649.6 AID29099.1 - 0.0057 17.3 0.0 0.017 15.8 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 AID29099.1 - 0.023 13.8 0.0 0.034 13.2 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.14 AID29099.1 - 0.047 13.2 0.0 0.082 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_12 PF08242.12 AID29099.1 - 0.083 13.6 0.0 0.19 12.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 AID29099.1 - 0.095 12.5 0.0 0.2 11.5 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 AID29099.1 - 0.1 13.3 0.0 0.45 11.2 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain UPF0060 PF02694.15 AID29100.1 - 8.1e-31 106.4 9.7 8.9e-31 106.3 9.7 1.0 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family EamA PF00892.20 AID29100.1 - 0.0027 17.9 6.8 0.0031 17.7 6.8 1.1 1 0 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 AID29100.1 - 0.4 11.4 5.1 0.49 11.1 4.8 1.4 1 1 0 1 1 1 0 Small Multidrug Resistance protein CMAS PF02353.20 AID29102.1 - 7.6e-98 327.1 0.1 1.2e-97 326.5 0.1 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 AID29102.1 - 4.8e-13 49.6 0.0 1e-12 48.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID29102.1 - 6.3e-12 45.6 0.0 1.1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29102.1 - 2.4e-10 40.9 0.1 4.8e-10 40.0 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID29102.1 - 3e-08 33.6 0.0 4.7e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID29102.1 - 1e-07 32.6 0.1 3.3e-07 31.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 AID29102.1 - 1.6e-06 27.8 0.0 2.6e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 AID29102.1 - 0.0085 15.7 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MUG113 PF13455.6 AID29102.1 - 0.013 16.1 0.0 0.056 14.1 0.0 2.0 1 1 0 1 1 1 0 Meiotically up-regulated gene 113 Methyltransf_32 PF13679.6 AID29102.1 - 0.022 14.7 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_PK PF05891.12 AID29102.1 - 0.023 14.2 0.0 0.043 13.3 0.0 1.4 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase DUF938 PF06080.12 AID29102.1 - 0.034 13.9 0.0 0.1 12.3 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF938) PCMT PF01135.19 AID29102.1 - 0.085 12.6 0.0 0.27 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ribosomal_L9_C PF03948.14 AID29103.1 - 1.1e-23 83.5 0.1 2e-23 82.6 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 AID29103.1 - 2.1e-21 75.2 0.9 3.5e-21 74.5 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L9, N-terminal domain Ribosomal_S18 PF01084.20 AID29105.1 - 1.5e-25 89.1 0.4 1.9e-25 88.8 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Med23 PF11573.8 AID29105.1 - 0.027 12.2 0.0 0.029 12.1 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 23 Ribosomal_S6 PF01250.17 AID29106.1 - 7.5e-28 96.7 0.0 9.4e-28 96.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S6 Transcript_VP30 PF11507.8 AID29106.1 - 0.2 11.8 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Ebola virus-specific transcription factor VP30 Tad PF13400.6 AID29107.1 - 1.5e-10 41.2 3.0 1.5e-10 41.2 3.0 2.0 2 0 0 2 2 2 1 Putative Flp pilus-assembly TadE/G-like VWA_2 PF13519.6 AID29107.1 - 7.7e-10 39.4 0.1 0.064 13.9 0.0 3.4 3 0 0 3 3 3 3 von Willebrand factor type A domain VWA PF00092.28 AID29107.1 - 1.3e-09 38.5 0.0 0.0015 18.8 0.0 3.9 3 1 0 3 3 3 2 von Willebrand factor type A domain CobT_C PF11775.8 AID29107.1 - 0.1 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT VWA domain Sulfatase PF00884.23 AID29108.1 - 1.5e-39 136.2 0.0 1.9e-39 135.9 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Apelin PF15360.6 AID29108.1 - 0.15 12.6 0.1 0.41 11.2 0.1 1.7 1 0 0 1 1 1 0 APJ endogenous ligand Acyl_transf_1 PF00698.21 AID29109.1 - 1.7e-36 126.4 2.9 2e-36 126.1 2.9 1.0 1 0 0 1 1 1 1 Acyl transferase domain HCMV_UL139 PF12507.8 AID29109.1 - 0.18 12.2 0.0 0.31 11.4 0.0 1.3 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein adh_short_C2 PF13561.6 AID29110.1 - 3.5e-64 216.5 4.6 4e-64 216.4 4.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID29110.1 - 1.6e-60 203.9 0.3 2.5e-60 203.3 0.3 1.3 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID29110.1 - 4.9e-18 65.7 0.1 9.1e-18 64.8 0.1 1.5 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID29110.1 - 0.0014 18.1 0.2 0.0043 16.5 0.1 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID29110.1 - 0.0032 17.4 0.9 0.0042 17.0 0.9 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 AID29110.1 - 0.0082 16.4 0.7 0.017 15.3 0.2 1.8 2 1 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain THF_DHG_CYH_C PF02882.19 AID29110.1 - 0.022 14.1 0.2 0.086 12.2 0.0 2.0 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ldh_1_N PF00056.23 AID29110.1 - 0.059 13.5 2.2 0.078 13.1 0.2 2.1 2 1 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain PP-binding PF00550.25 AID29111.1 - 7.8e-15 55.0 0.3 8.6e-15 54.9 0.3 1.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 AID29111.1 - 0.00061 20.0 0.5 0.00068 19.8 0.5 1.2 1 0 0 1 1 1 1 Acyl-carrier Ribosomal_L12_N PF16320.5 AID29111.1 - 0.0011 18.7 0.2 0.0025 17.5 0.1 1.8 2 0 0 2 2 2 1 Ribosomal protein L7/L12 dimerisation domain DUF1493 PF07377.12 AID29111.1 - 0.051 14.0 0.1 0.051 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) ketoacyl-synt PF00109.26 AID29112.1 - 1.1e-58 198.8 0.1 1.7e-58 198.2 0.1 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID29112.1 - 1.4e-34 118.6 1.0 2.4e-34 117.9 1.0 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 AID29112.1 - 2.1e-06 27.3 0.8 7e-06 25.6 0.4 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID29112.1 - 0.057 13.1 1.1 0.22 11.2 0.1 2.3 2 0 0 2 2 2 0 Thiolase, C-terminal domain KAsynt_C_assoc PF16197.5 AID29112.1 - 0.098 13.1 0.0 0.21 12.1 0.0 1.6 1 0 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension YceG PF02618.16 AID29113.1 - 1.9e-83 280.2 0.0 2.2e-83 280.0 0.0 1.1 1 0 0 1 1 1 1 YceG-like family YicC_N PF03755.13 AID29114.1 - 8.8e-35 120.4 0.4 1.7e-34 119.5 0.1 1.6 2 0 0 2 2 2 1 YicC-like family, N-terminal region DUF1732 PF08340.11 AID29114.1 - 6.4e-32 109.4 0.1 1.4e-31 108.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1732) Spc42p PF11544.8 AID29114.1 - 0.13 12.2 0.0 0.36 10.9 0.0 1.7 2 0 0 2 2 2 0 Spindle pole body component Spc42p Guanylate_kin PF00625.21 AID29115.1 - 2.8e-46 157.5 0.0 3.4e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase AAA_33 PF13671.6 AID29115.1 - 3.6e-06 27.2 0.0 7.7e-06 26.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID29115.1 - 0.00013 22.4 0.9 0.00033 21.1 0.9 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 AID29115.1 - 0.001 19.6 0.1 0.0021 18.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID29115.1 - 0.0077 16.5 0.0 0.031 14.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 AID29115.1 - 0.025 14.2 0.2 0.18 11.5 0.0 2.0 1 1 1 2 2 2 0 Thymidylate kinase AAA_25 PF13481.6 AID29115.1 - 0.078 12.5 0.3 1.2 8.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID29115.1 - 0.12 12.9 0.0 0.16 12.4 0.0 1.5 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 AID29115.1 - 0.12 12.3 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase cobW PF02492.19 AID29115.1 - 0.14 11.8 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 AID29115.1 - 0.19 11.5 0.1 0.46 10.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF1330 PF07045.11 AID29116.1 - 2.4e-34 117.5 0.1 2.7e-34 117.4 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) RrnaAD PF00398.20 AID29117.1 - 1.5e-49 168.4 0.0 1.7e-49 168.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 AID29117.1 - 0.00018 22.2 0.0 0.00032 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29117.1 - 0.018 15.7 0.0 0.034 14.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PdxA PF04166.12 AID29118.1 - 8.8e-100 333.7 0.2 1e-99 333.5 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Iso_dh PF00180.20 AID29118.1 - 0.061 12.5 0.0 0.091 11.9 0.0 1.2 1 0 0 1 1 1 0 Isocitrate/isopropylmalate dehydrogenase SurA_N PF09312.11 AID29119.1 - 4e-12 46.3 0.7 8.7e-12 45.2 0.7 1.7 1 1 0 1 1 1 1 SurA N-terminal domain SurA_N_3 PF13624.6 AID29119.1 - 5.5e-08 32.8 5.1 6.6e-08 32.5 3.0 2.3 2 1 0 2 2 2 1 SurA N-terminal domain SurA_N_2 PF13623.6 AID29119.1 - 5.2e-05 23.1 0.7 0.00011 22.1 0.1 1.9 2 0 0 2 2 2 1 SurA N-terminal domain DctM PF06808.12 AID29119.1 - 0.2 10.4 2.3 0.27 10.0 2.3 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporter, DctM component LptD PF04453.14 AID29120.1 - 1.6e-86 291.0 5.0 2.3e-86 290.5 5.0 1.2 1 0 0 1 1 1 1 LPS transport system D OstA PF03968.14 AID29120.1 - 0.0008 19.6 5.7 0.012 15.8 4.3 3.0 2 1 0 2 2 2 1 OstA-like protein OstA_2 PF13100.6 AID29120.1 - 0.065 12.8 0.3 0.18 11.4 0.3 1.7 1 0 0 1 1 1 0 OstA-like protein LptF_LptG PF03739.14 AID29121.1 - 1.5e-54 185.2 11.2 1.7e-54 185.0 11.2 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Phospholip_B PF04916.13 AID29121.1 - 0.11 11.1 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 Phospholipase B CPP1-like PF11833.8 AID29121.1 - 0.68 9.6 13.6 0.84 9.3 2.6 2.3 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like LptF_LptG PF03739.14 AID29122.1 - 3.9e-61 206.9 9.0 4.7e-61 206.6 9.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Peptidase_M17 PF00883.21 AID29124.1 - 2.6e-122 408.0 0.8 3.4e-122 407.6 0.8 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 AID29124.1 - 7.2e-20 71.1 1.2 7.2e-20 71.1 1.2 1.9 2 0 0 2 2 2 1 Cytosol aminopeptidase family, N-terminal domain DNA_pol3_chi PF04364.13 AID29125.1 - 1.3e-36 125.7 0.0 1.5e-36 125.5 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase III chi subunit, HolC DUF995 PF06191.12 AID29126.1 - 2.1e-52 176.5 1.5 2.5e-52 176.3 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF995) Glyco_hydro_26 PF02156.15 AID29127.1 - 4.7e-05 23.0 0.5 6.3e-05 22.6 0.5 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 26 Chloroa_b-bind PF00504.21 AID29127.1 - 0.14 12.7 0.1 28 5.2 0.0 2.5 1 1 0 2 2 2 0 Chlorophyll A-B binding protein Glyco_transf_21 PF13506.6 AID29128.1 - 1.2e-30 106.2 0.0 2.2e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 AID29128.1 - 3.5e-17 63.0 0.5 3.5e-17 63.0 0.5 2.5 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 AID29128.1 - 3.1e-13 50.1 0.0 6.6e-13 49.1 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 AID29128.1 - 1.5e-07 31.4 0.0 2.5e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Cellulose_synt PF03552.14 AID29128.1 - 0.00049 18.7 0.1 0.0019 16.8 0.0 1.8 2 0 0 2 2 2 1 Cellulose synthase DUF4307 PF14155.6 AID29130.1 - 0.04 13.8 0.4 0.056 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF995 PF06191.12 AID29131.1 - 2.5e-50 169.8 3.1 3.3e-50 169.4 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF995) Epimerase PF01370.21 AID29133.1 - 1.4e-56 191.6 0.0 1.7e-56 191.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID29133.1 - 2e-50 172.1 0.0 3.4e-50 171.3 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID29133.1 - 1.8e-15 56.7 0.0 5.9e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID29133.1 - 6.2e-15 55.1 0.0 8.9e-15 54.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID29133.1 - 1.6e-14 53.7 0.4 5.2e-12 45.5 0.4 3.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID29133.1 - 2.8e-07 30.0 1.1 5.2e-06 25.8 0.0 2.5 2 1 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 AID29133.1 - 3.3e-05 23.9 0.0 6.1e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 AID29133.1 - 0.0048 16.8 0.1 1.7 8.5 0.1 2.3 2 0 0 2 2 2 2 KR domain adh_short PF00106.25 AID29133.1 - 0.059 12.8 0.1 0.2 11.1 0.0 1.8 2 0 0 2 2 2 0 short chain dehydrogenase GDP_Man_Dehyd PF16363.5 AID29134.1 - 4.5e-42 144.6 0.0 9.6e-42 143.6 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 AID29134.1 - 2e-37 128.9 0.0 2.5e-37 128.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 AID29134.1 - 0.0061 15.7 0.0 0.0074 15.4 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 AID29134.1 - 0.06 12.5 0.0 0.094 11.9 0.0 1.2 1 0 0 1 1 1 0 Male sterility protein Polysacc_synt_2 PF02719.15 AID29134.1 - 0.28 10.3 0.0 2.7 7.0 0.0 1.9 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein CMD PF02627.20 AID29137.1 - 3.8e-18 65.3 0.4 9.7e-18 64.0 0.1 1.7 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family TetR_C_1 PF02909.17 AID29138.1 - 5e-39 133.4 0.1 7.8e-39 132.8 0.1 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID29138.1 - 2.6e-09 36.7 2.0 7.9e-09 35.2 0.2 2.5 2 1 1 3 3 3 1 Bacterial regulatory proteins, tetR family TP_methylase PF00590.20 AID29139.1 - 0.14 12.1 0.3 0.7 9.8 0.0 1.9 2 0 0 2 2 2 0 Tetrapyrrole (Corrin/Porphyrin) Methylases RsmJ PF04378.13 AID29140.1 - 4e-106 353.7 0.0 4.6e-106 353.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Methyltransf_20 PF12147.8 AID29140.1 - 0.031 13.4 0.0 0.046 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase DUF2020 PF09449.10 AID29140.1 - 0.043 13.6 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2020) N6-adenineMlase PF10237.9 AID29140.1 - 0.05 13.4 0.0 3.9 7.3 0.0 2.3 1 1 1 2 2 2 0 Probable N6-adenine methyltransferase MTS PF05175.14 AID29140.1 - 0.14 11.7 0.0 37 3.8 0.0 3.0 3 0 0 3 3 3 0 Methyltransferase small domain HTH_18 PF12833.7 AID29141.1 - 7.5e-16 58.2 1.7 1.4e-15 57.3 1.7 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID29141.1 - 7.1e-07 29.2 0.1 0.017 15.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family RELT PF12606.8 AID29142.1 - 0.066 12.2 0.3 0.066 12.2 0.3 1.4 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 Glyoxalase PF00903.25 AID29143.1 - 4.8e-12 46.2 0.1 5.8e-12 45.9 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29143.1 - 1.9e-06 28.6 0.1 3.3e-06 27.9 0.1 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 AID29143.1 - 0.0012 18.8 0.0 0.0023 17.9 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain DoxX PF07681.12 AID29144.1 - 1.5e-11 44.7 13.3 1.5e-11 44.7 13.3 1.5 2 0 0 2 2 2 1 DoxX SURF4 PF02077.15 AID29144.1 - 0.00035 20.3 0.2 0.0005 19.7 0.2 1.3 1 0 0 1 1 1 1 SURF4 family ATP-synt_J PF04911.12 AID29144.1 - 0.52 9.9 3.0 4.1 7.0 0.5 2.5 2 0 0 2 2 2 0 ATP synthase j chain TetR_N PF00440.23 AID29146.1 - 4.5e-15 55.2 0.2 9.1e-15 54.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 AID29146.1 - 0.00027 21.1 2.8 0.00048 20.3 2.8 1.4 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal CDPS PF16715.5 AID29146.1 - 0.043 13.5 0.0 0.079 12.6 0.0 1.5 1 0 0 1 1 1 0 Cyclodipeptide synthase EamA PF00892.20 AID29147.1 - 6.3e-13 49.1 29.9 1.2e-09 38.5 9.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family LysE PF01810.18 AID29149.1 - 7.8e-32 110.3 15.9 9.4e-32 110.0 15.9 1.1 1 0 0 1 1 1 1 LysE type translocator HTH_34 PF13601.6 AID29150.1 - 8.4e-23 80.3 0.1 9.9e-23 80.1 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID29150.1 - 3.4e-06 27.0 0.1 4.9e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID29150.1 - 0.00057 19.8 0.0 0.00097 19.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 AID29150.1 - 0.0019 18.0 0.0 0.0037 17.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID29150.1 - 0.035 14.0 0.2 0.16 11.9 0.1 1.8 1 1 1 2 2 2 0 MarR family Rrf2 PF02082.20 AID29150.1 - 0.057 13.8 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator GST_N_3 PF13417.6 AID29153.1 - 1.8e-16 60.3 0.0 3.1e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID29153.1 - 2.5e-11 43.7 0.0 4.5e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID29153.1 - 1.7e-10 41.1 0.0 3.2e-10 40.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 AID29153.1 - 0.0047 17.6 0.0 0.01 16.5 0.0 1.6 1 1 1 2 2 2 1 Glutathione S-transferase N-terminal domain OMP_b-brl PF13505.6 AID29154.1 - 2e-21 76.9 10.0 2.4e-21 76.6 10.0 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 AID29154.1 - 2.1e-06 27.6 3.6 4.6e-06 26.5 3.6 1.6 1 1 0 1 1 1 1 OmpA-like transmembrane domain Porin_2 PF02530.14 AID29154.1 - 0.00053 19.4 0.0 0.00062 19.2 0.0 1.2 1 0 0 1 1 1 1 Porin subfamily BBP2 PF07642.11 AID29154.1 - 0.0082 15.3 2.6 0.01 15.0 2.6 1.3 1 1 0 1 1 1 1 Putative beta-barrel porin-2, OmpL-like. bbp2 BBP2_2 PF10082.9 AID29154.1 - 0.014 14.3 0.3 0.018 13.9 0.3 1.3 1 0 0 1 1 1 0 Putative beta-barrel porin 2 adh_short PF00106.25 AID29155.1 - 7.1e-35 120.2 0.0 8.9e-35 119.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID29155.1 - 4.4e-31 108.2 0.0 5.2e-31 108.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID29155.1 - 2.3e-11 43.9 0.2 3.6e-11 43.3 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID29155.1 - 0.00092 18.7 0.3 0.0014 18.1 0.3 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID29155.1 - 0.0097 15.3 0.1 0.013 14.9 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 AID29155.1 - 0.1 12.5 1.6 0.15 11.9 1.6 1.2 1 0 0 1 1 1 0 NAD(P)H-binding YfaZ PF07437.11 AID29155.1 - 0.14 11.8 0.8 4.2 7.0 0.0 2.2 2 0 0 2 2 2 0 YfaZ precursor UvrC_HhH_N PF08459.11 AID29156.1 - 1.6e-50 171.0 0.0 3.9e-50 169.8 0.0 1.7 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal UVR PF02151.19 AID29156.1 - 1.7e-10 40.3 0.9 4e-10 39.1 0.9 1.7 1 0 0 1 1 1 1 UvrB/uvrC motif GIY-YIG PF01541.24 AID29156.1 - 3.1e-10 40.2 0.0 6.6e-10 39.1 0.0 1.5 1 0 0 1 1 1 1 GIY-YIG catalytic domain HHH_5 PF14520.6 AID29156.1 - 2.8e-05 24.6 0.4 9.8e-05 22.9 0.1 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 AID29156.1 - 4.5e-05 23.5 0.0 0.00011 22.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 AID29156.1 - 0.00017 21.3 0.4 0.25 11.3 0.0 3.5 3 0 0 3 3 3 1 Helix-hairpin-helix motif CDP-OH_P_transf PF01066.21 AID29157.1 - 6.2e-17 62.1 0.3 6.2e-17 62.1 0.3 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Phage_holin_4_1 PF05105.12 AID29157.1 - 0.048 13.8 1.2 0.1 12.8 1.0 1.8 1 1 0 1 1 1 0 Bacteriophage holin family DUF4149 PF13664.6 AID29157.1 - 0.36 11.2 5.0 6.2 7.2 0.1 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4149) ThiS PF02597.20 AID29158.1 - 1.5e-17 64.0 0.0 1.7e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 ThiS family DUF982 PF06169.12 AID29158.1 - 0.12 12.4 0.0 1.1 9.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF982) MoaE PF02391.17 AID29159.1 - 9e-32 109.7 0.0 1.1e-31 109.4 0.0 1.1 1 0 0 1 1 1 1 MoaE protein YscW PF09619.10 AID29160.1 - 2.4e-32 111.5 0.1 4.8e-32 110.5 0.1 1.5 1 0 0 1 1 1 1 Type III secretion system lipoprotein chaperone (YscW) META PF03724.16 AID29160.1 - 3e-26 91.5 0.0 4.8e-26 90.9 0.0 1.3 1 0 0 1 1 1 1 META domain NDK PF00334.19 AID29161.1 - 1.4e-50 170.8 0.0 1.5e-50 170.7 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF4192 PF13830.6 AID29161.1 - 0.021 14.9 0.1 0.023 14.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4192) DUF2934 PF11154.8 AID29162.1 - 1.5e-12 46.9 10.5 2.2e-12 46.4 10.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2934) GST_N_3 PF13417.6 AID29163.1 - 2.9e-12 46.8 0.0 1.6e-11 44.4 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID29163.1 - 6.7e-09 35.6 1.2 1.7e-08 34.4 1.2 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID29163.1 - 1e-06 28.9 0.0 3.7e-06 27.1 0.0 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID29163.1 - 0.002 18.3 0.0 0.003 17.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 AID29163.1 - 0.027 14.3 0.0 0.045 13.5 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DinB PF05163.12 AID29164.1 - 1.3e-51 174.9 0.6 1.5e-51 174.7 0.6 1.0 1 0 0 1 1 1 1 DinB family DinB_2 PF12867.7 AID29164.1 - 2.1e-10 41.2 1.2 2.8e-10 40.8 1.2 1.1 1 0 0 1 1 1 1 DinB superfamily DUF664 PF04978.12 AID29164.1 - 2.4e-05 24.8 1.7 0.00013 22.4 1.7 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF664) LysR_substrate PF03466.20 AID29166.1 - 1.9e-35 122.1 0.0 2.5e-35 121.8 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29166.1 - 1.9e-16 59.8 0.2 3.3e-16 59.0 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF4347 PF14252.6 AID29166.1 - 0.13 12.1 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) EamA PF00892.20 AID29168.1 - 3.8e-22 78.9 34.0 1.6e-12 47.8 11.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family ROS_MUCR PF05443.11 AID29170.1 - 3.4e-47 159.6 0.0 5.1e-47 159.0 0.0 1.3 1 0 0 1 1 1 1 ROS/MUCR transcriptional regulator protein cNMP_binding PF00027.29 AID29171.1 - 3.5e-20 71.9 0.1 5.3e-20 71.3 0.1 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 AID29171.1 - 1.7e-10 40.7 0.0 3.2e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID29171.1 - 0.0018 18.1 0.0 0.0093 15.8 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID29171.1 - 0.0078 15.8 0.0 0.014 14.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID29171.1 - 0.068 13.0 0.0 0.18 11.6 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain ABC_tran PF00005.27 AID29172.1 - 1.1e-45 155.6 0.3 2e-24 86.6 0.0 3.3 3 0 0 3 3 3 2 ABC transporter ABC_tran_Xtn PF12848.7 AID29172.1 - 2.8e-23 81.8 4.7 2.8e-23 81.8 4.7 2.9 3 0 0 3 3 2 1 ABC transporter AAA_21 PF13304.6 AID29172.1 - 3.3e-11 43.6 19.2 0.0005 20.0 0.2 4.7 3 2 1 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29172.1 - 2.4e-09 36.9 0.1 0.0035 16.8 0.0 3.7 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain ABC_tran_CTD PF16326.5 AID29172.1 - 1.4e-06 28.4 1.1 1.4e-06 28.4 1.1 3.1 3 1 0 3 3 2 1 ABC transporter C-terminal domain AAA_29 PF13555.6 AID29172.1 - 9.4e-06 25.3 1.2 0.14 12.0 0.0 2.8 3 0 0 3 3 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 AID29172.1 - 2.4e-05 24.4 0.3 0.022 14.8 0.0 2.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_15 PF13175.6 AID29172.1 - 0.00013 21.8 0.2 1.6 8.3 0.0 3.4 2 1 1 3 3 3 2 AAA ATPase domain AAA_5 PF07728.14 AID29172.1 - 0.0002 21.4 0.1 0.65 10.0 0.1 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.29 AID29172.1 - 0.00026 21.4 0.1 0.1 13.0 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID29172.1 - 0.00027 20.9 0.7 0.64 9.9 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 AID29172.1 - 0.00055 20.5 5.6 0.015 15.9 0.0 3.5 4 0 0 4 4 4 1 AAA domain RNA_helicase PF00910.22 AID29172.1 - 0.0012 19.2 1.2 0.82 10.1 0.0 3.1 3 0 0 3 3 3 1 RNA helicase AAA_28 PF13521.6 AID29172.1 - 0.0013 19.0 1.4 0.23 11.7 0.0 3.1 3 0 0 3 3 3 1 AAA domain NACHT PF05729.12 AID29172.1 - 0.0015 18.5 0.2 1.1 9.2 0.0 2.8 2 0 0 2 2 2 1 NACHT domain AAA_30 PF13604.6 AID29172.1 - 0.0036 17.0 0.2 1 9.0 0.1 2.9 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID29172.1 - 0.0045 17.3 0.2 4.8 7.4 0.0 3.0 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID29172.1 - 0.0045 17.5 3.6 1.2 9.6 0.0 3.9 5 0 0 5 5 3 1 AAA domain AAA_24 PF13479.6 AID29172.1 - 0.0077 16.0 2.2 3.6 7.3 0.0 3.3 3 0 0 3 3 3 1 AAA domain SbcCD_C PF13558.6 AID29172.1 - 0.011 16.0 0.4 0.6 10.4 0.0 3.3 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MeaB PF03308.16 AID29172.1 - 0.022 13.8 1.0 0.55 9.2 0.1 2.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_7 PF12775.7 AID29172.1 - 0.028 13.9 0.4 1.8 8.0 0.1 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region NB-ARC PF00931.22 AID29172.1 - 0.033 13.4 0.5 0.51 9.5 0.2 2.2 2 0 0 2 2 2 0 NB-ARC domain SRP54 PF00448.22 AID29172.1 - 0.053 13.2 0.5 5 6.7 0.0 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Roc PF08477.13 AID29172.1 - 0.06 13.6 0.2 6 7.1 0.1 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 AID29172.1 - 0.06 13.7 7.5 0.94 9.8 0.0 3.5 3 1 1 4 4 4 0 AAA ATPase domain TsaE PF02367.17 AID29172.1 - 0.063 13.3 1.1 12 5.9 0.1 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PduV-EutP PF10662.9 AID29172.1 - 0.085 12.6 0.8 3.2 7.5 0.1 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 AID29172.1 - 0.085 12.4 4.6 4 7.0 0.4 3.4 3 0 0 3 3 3 0 AAA domain DUF815 PF05673.13 AID29172.1 - 0.086 12.0 0.0 15 4.6 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF815) RuvB_N PF05496.12 AID29172.1 - 0.14 11.9 3.2 1.8 8.3 0.0 2.9 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain DUF87 PF01935.17 AID29172.1 - 0.18 11.8 0.0 0.18 11.8 0.0 2.8 3 0 0 3 3 3 0 Helicase HerA, central domain NTPase_1 PF03266.15 AID29172.1 - 0.27 11.1 1.5 18 5.2 0.2 2.6 2 0 0 2 2 2 0 NTPase Dynamin_N PF00350.23 AID29172.1 - 0.4 10.7 2.0 4.7 7.2 0.0 3.1 4 0 0 4 4 3 0 Dynamin family AAA_33 PF13671.6 AID29172.1 - 0.48 10.6 9.1 4 7.6 0.0 3.7 4 1 0 4 4 4 0 AAA domain Thymidylate_kin PF02223.17 AID29172.1 - 0.59 9.8 7.0 4.8 6.8 0.0 3.4 3 1 0 3 3 3 0 Thymidylate kinase CCDC-167 PF15188.6 AID29172.1 - 0.84 10.0 2.9 0.46 10.8 0.1 2.0 2 0 0 2 2 1 0 Coiled-coil domain-containing protein 167 PriC PF07445.12 AID29172.1 - 1.3 8.9 7.0 0.16 11.9 0.2 2.2 2 0 0 2 2 2 0 Primosomal replication protein priC AAA_13 PF13166.6 AID29172.1 - 2.4 6.7 10.7 5.5 5.5 0.2 3.8 4 0 0 4 4 4 0 AAA domain FapA PF03961.13 AID29172.1 - 3.2 6.2 4.5 0.54 8.8 0.2 1.7 2 0 0 2 2 2 0 Flagellar Assembly Protein A Aldo_ket_red PF00248.21 AID29173.1 - 1.3e-52 178.9 0.0 1.9e-50 171.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family NmrA PF05368.13 AID29174.1 - 7.3e-18 65.0 0.0 1.3e-17 64.2 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID29174.1 - 2.4e-16 60.2 0.0 5e-16 59.1 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 AID29174.1 - 0.00016 21.2 0.0 0.00052 19.6 0.0 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 AID29174.1 - 0.0028 17.9 0.0 0.0061 16.8 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 AID29174.1 - 0.012 15.2 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA GDP_Man_Dehyd PF16363.5 AID29174.1 - 0.02 14.3 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase KR PF08659.10 AID29174.1 - 0.087 12.7 0.1 0.17 11.7 0.1 1.5 1 0 0 1 1 1 0 KR domain F420_oxidored PF03807.17 AID29174.1 - 0.11 13.1 0.0 0.24 12.0 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 AID29174.1 - 0.15 12.2 0.0 0.31 11.2 0.0 1.6 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Beta-lactamase PF00144.24 AID29175.1 - 1e-60 205.7 1.3 2.4e-60 204.5 1.3 1.5 1 1 0 1 1 1 1 Beta-lactamase Beta-lactamase2 PF13354.6 AID29175.1 - 0.02 14.5 0.0 6 6.4 0.0 2.3 2 0 0 2 2 2 0 Beta-lactamase enzyme family LysR_substrate PF03466.20 AID29176.1 - 1.7e-36 125.6 6.0 2.5e-36 125.0 6.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29176.1 - 8.8e-19 67.2 0.7 1.6e-18 66.4 0.7 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID29176.1 - 0.00044 20.1 0.1 0.0015 18.4 0.1 1.9 1 0 0 1 1 1 1 MarR family HTH_8 PF02954.19 AID29176.1 - 0.0029 17.4 0.1 0.0058 16.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_24 PF13412.6 AID29176.1 - 0.016 14.8 0.0 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID29176.1 - 0.02 14.9 0.1 0.052 13.6 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 AID29176.1 - 0.071 13.1 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Molybdopterin PF00384.22 AID29177.1 - 7.7e-46 156.9 0.0 2.5e-45 155.2 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 AID29177.1 - 1.4e-24 86.3 0.0 3.3e-24 85.1 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 AID29177.1 - 1.8e-06 27.9 1.1 3.4e-06 26.9 1.1 1.4 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Arginase PF00491.21 AID29178.1 - 5e-60 203.4 0.2 6.7e-60 203.0 0.2 1.1 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 AID29178.1 - 0.034 14.4 0.0 0.054 13.7 0.0 1.2 1 0 0 1 1 1 0 UPF0489 domain PS_pyruv_trans PF04230.13 AID29178.1 - 0.1 12.5 0.0 0.25 11.2 0.0 1.6 1 1 0 1 1 1 0 Polysaccharide pyruvyl transferase FlgO PF17680.1 AID29178.1 - 0.2 11.4 0.3 2.3 7.9 0.0 2.4 2 1 1 3 3 3 0 FlgO protein Pyr_redox_3 PF13738.6 AID29179.1 - 6.4e-36 124.1 0.0 6.1e-33 114.4 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 AID29179.1 - 2.6e-35 121.9 0.0 4.3e-35 121.1 0.0 1.3 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 AID29179.1 - 1.6e-18 67.0 0.0 3.8e-13 49.3 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 AID29179.1 - 2.7e-17 62.9 0.0 2.5e-15 56.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID29179.1 - 1.6e-10 40.8 2.3 1.1e-08 34.7 0.1 3.0 3 1 1 4 4 4 1 FAD binding domain NAD_binding_9 PF13454.6 AID29179.1 - 4e-09 36.6 1.4 0.025 14.6 0.0 4.1 4 0 0 4 4 4 2 FAD-NAD(P)-binding DAO PF01266.24 AID29179.1 - 1.2e-07 31.7 4.8 0.0014 18.2 0.4 3.4 2 1 1 4 4 4 2 FAD dependent oxidoreductase ApbA PF02558.16 AID29179.1 - 2.2e-07 30.7 0.1 0.0043 16.7 0.0 2.4 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 AID29179.1 - 1.1e-06 29.1 0.7 0.084 13.4 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 AID29179.1 - 4.5e-06 26.9 0.1 0.012 15.9 0.0 2.6 2 0 0 2 2 2 2 TrkA-N domain NAD_binding_8 PF13450.6 AID29179.1 - 5.6e-06 26.5 0.0 2.3e-05 24.5 0.0 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 2-Hacid_dh_C PF02826.19 AID29179.1 - 7.4e-06 25.4 0.1 0.016 14.6 0.0 2.2 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 AID29179.1 - 8.4e-06 25.5 0.0 0.012 15.2 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, NADPH-binding domain HI0933_like PF03486.14 AID29179.1 - 2e-05 23.5 0.2 0.00079 18.2 0.5 2.5 3 0 0 3 3 3 1 HI0933-like protein F420_oxidored PF03807.17 AID29179.1 - 2.8e-05 24.6 0.5 0.11 13.1 0.0 2.6 2 0 0 2 2 2 2 NADP oxidoreductase coenzyme F420-dependent FAD_binding_2 PF00890.24 AID29179.1 - 3.5e-05 23.1 0.6 3.5e-05 23.1 0.6 2.4 3 0 0 3 3 3 1 FAD binding domain Shikimate_DH PF01488.20 AID29179.1 - 0.00013 22.0 0.0 0.65 10.1 0.0 2.3 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.12 AID29179.1 - 0.00042 19.5 1.2 0.0067 15.5 0.0 2.7 3 0 0 3 3 3 1 Lycopene cyclase protein 3HCDH_N PF02737.18 AID29179.1 - 0.00064 19.7 0.2 0.08 12.8 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AID29179.1 - 0.00095 19.6 0.0 0.79 10.2 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 AID29179.1 - 0.0018 18.3 0.1 0.76 9.7 0.0 2.2 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Thi4 PF01946.17 AID29179.1 - 0.0019 17.5 0.5 0.03 13.6 0.1 2.2 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 AID29179.1 - 0.0019 17.3 2.1 0.15 11.1 0.2 2.5 3 0 0 3 3 3 1 Glucose inhibited division protein A ThiF PF00899.21 AID29179.1 - 0.0031 16.9 0.6 0.42 9.9 0.0 3.0 3 0 0 3 3 3 1 ThiF family UDPG_MGDP_dh_N PF03721.14 AID29179.1 - 0.0098 15.5 0.0 0.083 12.5 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amino_oxidase PF01593.24 AID29179.1 - 0.012 14.9 0.0 0.56 9.4 0.0 2.7 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase PALP PF00291.25 AID29179.1 - 0.065 12.6 0.3 0.99 8.8 0.0 2.1 2 0 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme XdhC_C PF13478.6 AID29179.1 - 0.085 13.4 0.1 0.18 12.3 0.0 1.7 2 0 0 2 2 1 0 XdhC Rossmann domain YjeF_N PF03853.15 AID29179.1 - 0.089 12.7 0.0 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 YjeF-related protein N-terminus CoA_binding PF02629.19 AID29179.1 - 0.098 13.4 0.7 7.6 7.3 0.2 2.4 2 0 0 2 2 2 0 CoA binding domain AsnC_trans_reg PF01037.21 AID29180.1 - 1.2e-18 66.8 0.1 1.9e-18 66.2 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID29180.1 - 2.4e-14 52.8 0.3 4.1e-14 52.1 0.3 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID29180.1 - 9.7e-14 50.7 0.1 1.4e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID29180.1 - 0.0003 20.6 0.0 0.00048 20.0 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID29180.1 - 0.00054 19.8 0.1 0.00084 19.2 0.1 1.3 1 0 0 1 1 1 1 MarR family GYD PF08734.11 AID29180.1 - 0.0063 16.4 0.1 0.01 15.8 0.1 1.4 1 0 0 1 1 1 1 GYD domain HTH_28 PF13518.6 AID29180.1 - 0.012 15.7 0.0 0.026 14.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID29180.1 - 0.032 14.2 0.1 0.079 12.9 0.1 1.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_11 PF08279.12 AID29180.1 - 0.048 13.6 0.1 0.075 13.0 0.1 1.3 1 0 0 1 1 1 0 HTH domain HTH_1 PF00126.27 AID29180.1 - 0.1 12.6 0.1 0.37 10.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family PALP PF00291.25 AID29181.1 - 5.3e-60 203.3 11.1 6.5e-60 203.0 11.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Urocanase PF01175.18 AID29181.1 - 0.084 12.5 0.2 0.17 11.5 0.2 1.4 1 0 0 1 1 1 0 Urocanase Rossmann-like domain Peptidase_M20 PF01546.28 AID29182.1 - 2.4e-36 125.4 1.1 3e-36 125.1 1.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID29182.1 - 9.2e-10 38.4 0.0 1.8e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 AID29182.1 - 8e-07 28.9 0.1 1.3e-06 28.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M28 DUF3097 PF11296.8 AID29182.1 - 0.13 11.5 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) Peptidase_M20 PF01546.28 AID29183.1 - 4.5e-31 108.2 0.3 5.8e-31 107.8 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID29183.1 - 0.0018 18.2 0.3 0.0082 16.0 0.1 2.1 2 0 0 2 2 2 1 Peptidase dimerisation domain Cep57_MT_bd PF06657.13 AID29184.1 - 0.0033 17.8 0.2 0.0036 17.7 0.2 1.0 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 LPAM_1 PF08139.12 AID29186.1 - 0.53 10.9 4.2 0.7 10.5 4.2 1.2 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site UvrD-helicase PF00580.21 AID29187.1 - 5.5e-58 197.0 0.0 1.3e-28 100.5 0.0 2.1 2 0 0 2 2 2 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 AID29187.1 - 1.4e-41 143.1 0.0 7.1e-22 78.3 0.0 2.1 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AID29187.1 - 1.3e-31 109.9 0.0 2.2e-31 109.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 AID29187.1 - 1.7e-12 46.9 0.1 1.5e-11 43.9 0.1 2.6 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 AID29187.1 - 1.4e-10 41.2 0.8 1e-05 25.4 0.1 2.3 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 AID29187.1 - 1e-05 25.4 0.0 0.029 14.1 0.0 3.2 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_12 PF13087.6 AID29187.1 - 0.0007 19.3 0.0 0.055 13.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 AID29187.1 - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase DapB_C PF05173.14 AID29188.1 - 4.5e-37 126.8 0.0 6e-37 126.4 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 AID29188.1 - 7.4e-24 84.2 0.0 2e-23 82.9 0.0 1.7 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 AID29188.1 - 0.065 13.7 0.0 0.24 11.9 0.0 1.9 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain NMT1 PF09084.11 AID29190.1 - 1e-19 71.4 0.3 1.9e-19 70.5 0.3 1.3 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 AID29190.1 - 2.7e-10 40.4 0.2 2e-09 37.5 0.2 2.2 1 1 0 1 1 1 1 NMT1-like family SBP_bac_3 PF00497.20 AID29190.1 - 0.00098 18.6 0.0 0.002 17.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 ABC_tran PF00005.27 AID29191.1 - 3.6e-30 105.2 0.0 5.1e-30 104.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29191.1 - 4.6e-07 29.9 0.2 0.0078 16.0 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29191.1 - 0.002 17.6 0.0 1.3 8.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID29191.1 - 0.0035 17.6 0.3 0.011 16.0 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID29191.1 - 0.005 17.2 0.1 0.0074 16.7 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 AID29191.1 - 0.0067 16.0 0.8 0.12 11.9 0.1 2.6 3 1 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 AID29191.1 - 0.0084 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 AID29191.1 - 0.016 15.2 0.0 0.037 14.1 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_30 PF13604.6 AID29191.1 - 0.017 14.9 1.5 0.044 13.5 0.1 2.1 2 1 1 3 3 3 0 AAA domain AAA_29 PF13555.6 AID29191.1 - 0.019 14.7 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SSE PF00437.20 AID29191.1 - 0.024 13.7 0.1 0.037 13.1 0.1 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.6 AID29191.1 - 0.026 14.8 0.7 2.3 8.4 0.3 2.4 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 AID29191.1 - 0.045 13.3 0.1 0.17 11.4 0.1 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region Rad17 PF03215.15 AID29191.1 - 0.055 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA PF00004.29 AID29191.1 - 0.098 13.1 0.2 0.44 11.0 0.2 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID29191.1 - 0.1 13.1 0.1 0.15 12.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 AID29191.1 - 0.24 11.7 1.5 12 6.2 0.4 2.7 3 1 0 3 3 3 0 AAA domain BPD_transp_1 PF00528.22 AID29192.1 - 4.6e-24 85.2 19.3 4.6e-24 85.2 19.3 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_Omp PF13488.6 AID29192.1 - 2.2 8.4 9.9 5.2 7.2 0.6 2.5 2 0 0 2 2 2 0 Glycine zipper Gly-zipper_YMGG PF13441.6 AID29192.1 - 5.4 6.8 8.8 13 5.6 0.5 2.6 2 1 0 2 2 2 0 YMGG-like Gly-zipper 2CSK_N PF08521.10 AID29193.1 - 2.5e-35 121.6 3.8 7e-35 120.1 0.2 2.5 2 1 0 2 2 2 1 Two-component sensor kinase N-terminal HATPase_c PF02518.26 AID29193.1 - 1.6e-23 83.3 0.0 2.6e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID29193.1 - 7.9e-11 41.8 1.3 2.6e-10 40.2 1.3 1.9 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AID29193.1 - 4.6e-06 26.6 0.0 1.4e-05 25.1 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID29193.1 - 0.048 13.5 0.0 0.082 12.7 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID29193.1 - 0.078 13.4 0.7 0.078 13.4 0.7 2.8 3 1 0 3 3 3 0 HAMP domain HATPase_c_5 PF14501.6 AID29193.1 - 0.22 11.5 0.0 0.48 10.3 0.0 1.5 1 1 0 1 1 1 0 GHKL domain Response_reg PF00072.24 AID29194.1 - 2e-25 89.1 0.0 3.2e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID29194.1 - 8.3e-17 61.0 0.0 1.6e-16 60.1 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF680 PF05079.12 AID29195.1 - 3.9e-19 69.1 1.7 6.1e-19 68.5 1.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF680) PepSY_2 PF13670.6 AID29195.1 - 0.02 14.9 3.9 0.35 10.9 0.6 2.2 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain CbiN PF02553.15 AID29195.1 - 0.036 14.0 0.2 0.15 12.0 0.1 2.0 2 0 0 2 2 2 0 Cobalt transport protein component CbiN TrbC PF04956.13 AID29195.1 - 0.061 13.5 4.4 0.073 13.3 3.7 1.5 1 1 0 1 1 1 0 TrbC/VIRB2 family DUF680 PF05079.12 AID29196.1 - 1.6e-18 67.1 5.0 2.1e-18 66.8 5.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF680) CbiN PF02553.15 AID29196.1 - 0.024 14.6 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Cobalt transport protein component CbiN PepSY_2 PF13670.6 AID29196.1 - 0.38 10.8 2.0 0.72 9.9 2.0 1.6 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain DUF680 PF05079.12 AID29197.1 - 2.9e-22 79.1 0.8 4e-22 78.7 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF680) DUF680 PF05079.12 AID29198.1 - 3.2e-18 66.2 3.5 4e-18 65.8 3.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF680) PhrC_PhrF PF11131.8 AID29198.1 - 0.099 12.3 2.2 0.19 11.3 2.2 1.5 1 0 0 1 1 1 0 Rap-phr extracellular signalling His_Phos_1 PF00300.22 AID29199.1 - 4.2e-10 39.6 0.1 8.3e-10 38.7 0.0 1.5 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) DUF2251 PF10008.9 AID29200.1 - 0.00016 21.7 0.1 0.0003 20.8 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2251) DUF2283 PF10049.9 AID29200.1 - 0.02 15.1 0.0 0.05 13.8 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2283) Formyl_trans_N PF00551.19 AID29201.1 - 5.9e-57 192.3 0.1 9.2e-57 191.7 0.1 1.3 1 0 0 1 1 1 1 Formyl transferase Glyco_transf_4 PF13439.6 AID29201.1 - 0.078 13.0 0.1 0.17 11.9 0.1 1.6 2 0 0 2 2 2 0 Glycosyltransferase Family 4 AIRS_C PF02769.22 AID29202.1 - 6.1e-38 130.4 0.1 9.4e-38 129.8 0.1 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 AID29202.1 - 6.9e-15 55.5 1.5 6.9e-15 55.5 1.5 1.6 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain CDP-OH_P_transf PF01066.21 AID29203.1 - 1.3e-17 64.3 0.4 1.3e-17 64.3 0.4 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase AI-2E_transport PF01594.16 AID29204.1 - 7.2e-64 216.0 39.7 9.3e-64 215.6 39.7 1.0 1 0 0 1 1 1 1 AI-2E family transporter ETC_C1_NDUFA4 PF04800.12 AID29206.1 - 3.9e-36 123.2 0.1 4.3e-36 123.1 0.1 1.0 1 0 0 1 1 1 1 ETC complex I subunit conserved region DUF2188 PF09954.9 AID29206.1 - 0.026 14.7 0.1 0.075 13.2 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2188) Phage_integrase PF00589.22 AID29207.1 - 2.5e-12 46.9 0.1 4.1e-12 46.2 0.1 1.3 1 0 0 1 1 1 1 Phage integrase family DUF3071 PF11268.8 AID29207.1 - 0.031 14.3 0.0 0.056 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) HNH PF01844.23 AID29208.1 - 0.0039 17.3 0.0 0.0056 16.8 0.0 1.3 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 AID29208.1 - 0.094 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 HNH endonuclease DUF1367 PF07105.11 AID29209.1 - 0.065 12.9 0.2 0.23 11.1 0.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1367) YqaJ PF09588.10 AID29210.1 - 3.7e-13 49.9 0.0 4.7e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 YqaJ-like viral recombinase domain Sipho_Gp157 PF05565.11 AID29210.1 - 0.02 14.9 0.1 0.035 14.1 0.1 1.3 1 0 0 1 1 1 0 Siphovirus Gp157 DUF3839 PF12943.7 AID29210.1 - 0.13 11.7 0.1 0.21 11.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) ERF PF04404.12 AID29211.1 - 8.9e-15 54.9 0.0 1.2e-14 54.4 0.0 1.1 1 0 0 1 1 1 1 ERF superfamily MTS PF05175.14 AID29214.1 - 0.082 12.4 0.0 0.87 9.1 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase small domain HemN_C PF06969.16 AID29215.1 - 0.053 13.6 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 HemN C-terminal domain HTH_3 PF01381.22 AID29216.1 - 0.0025 17.8 0.0 0.0046 17.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID29216.1 - 0.092 12.8 0.0 0.25 11.4 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 AID29217.1 - 4.2e-12 45.9 0.0 4.7e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID29217.1 - 5.2e-09 36.3 0.3 6.1e-09 36.1 0.3 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AID29217.1 - 5.7e-08 32.7 0.0 5.9e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID29217.1 - 0.00058 19.6 0.0 0.00085 19.0 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_37 PF13744.6 AID29217.1 - 0.00082 19.3 0.0 0.00093 19.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 AID29217.1 - 0.0032 17.3 0.0 0.0034 17.2 0.0 1.2 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_Tnp_4 PF13613.6 AID29217.1 - 0.011 15.5 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_24 PF13412.6 AID29217.1 - 0.014 14.9 0.1 0.065 12.8 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_25 PF13413.6 AID29217.1 - 0.018 14.9 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CII PF05269.11 AID29217.1 - 0.02 15.1 0.0 0.025 14.8 0.0 1.3 1 1 0 1 1 1 0 Bacteriophage CII protein HTH_AsnC-type PF13404.6 AID29217.1 - 0.022 14.6 0.7 0.31 10.9 0.0 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain MqsA_antitoxin PF15731.5 AID29217.1 - 0.028 14.5 0.0 0.029 14.5 0.0 1.0 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA MarR_2 PF12802.7 AID29217.1 - 0.046 13.6 0.0 0.076 12.9 0.0 1.4 1 0 0 1 1 1 0 MarR family P22_Cro PF14549.6 AID29217.1 - 0.048 13.5 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro MarR PF01047.22 AID29217.1 - 0.051 13.5 0.0 0.066 13.1 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_38 PF13936.6 AID29217.1 - 0.054 13.3 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Pou PF00157.17 AID29217.1 - 0.058 13.4 0.0 0.092 12.7 0.0 1.4 1 1 0 1 1 1 0 Pou domain - N-terminal to homeobox domain DUF4447 PF14590.6 AID29217.1 - 0.058 13.2 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) HTH_Crp_2 PF13545.6 AID29217.1 - 0.086 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Phage_CI_repr PF07022.13 AID29217.1 - 0.086 12.9 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_26 PF13443.6 AID29217.1 - 0.14 12.6 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2312 PF10073.9 AID29218.1 - 2.9e-27 94.1 1.4 4.1e-27 93.6 1.4 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2312) Paralemmin PF03285.15 AID29218.1 - 0.035 13.7 0.3 0.077 12.6 0.3 1.5 1 0 0 1 1 1 0 Paralemmin zf-C4H2 PF10146.9 AID29218.1 - 3.8 7.7 7.7 12 6.2 7.7 1.7 1 1 0 1 1 1 0 Zinc finger-containing protein TetR_C_14 PF17754.1 AID29220.1 - 0.031 14.2 0.5 0.63 10.0 0.1 2.1 1 1 1 2 2 2 0 MftR C-terminal domain HTH_3 PF01381.22 AID29220.1 - 0.043 13.9 0.0 0.096 12.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix Sbt_1 PF05982.12 AID29220.1 - 0.076 12.3 0.1 0.087 12.1 0.1 1.1 1 0 0 1 1 1 0 Na+-dependent bicarbonate transporter superfamily GcrA PF07750.11 AID29222.1 - 9.5e-08 32.6 6.5 1.4e-05 25.6 6.5 2.2 1 1 0 1 1 1 1 GcrA cell cycle regulator DUF4873 PF16170.5 AID29223.1 - 0.076 13.2 0.0 0.082 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4873) B9-C2 PF07162.11 AID29225.1 - 0.11 12.7 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Ciliary basal body-associated, B9 protein DUF1376 PF07120.11 AID29227.1 - 1.7e-27 95.5 0.5 2.8e-27 94.8 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1376) NusG PF02357.19 AID29229.1 - 4.1e-06 27.2 0.0 0.00071 20.0 0.0 2.3 2 0 0 2 2 2 2 Transcription termination factor nusG FR47 PF08445.10 AID29233.1 - 0.012 15.6 0.0 0.013 15.4 0.0 1.0 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_7 PF13508.7 AID29233.1 - 0.032 14.7 0.0 0.035 14.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID29233.1 - 0.038 13.9 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Terminase_6 PF03237.15 AID29234.1 - 8.6e-29 100.7 0.0 1.3e-28 100.2 0.0 1.2 1 0 0 1 1 1 1 Terminase-like family Replic_Relax PF13814.6 AID29235.1 - 0.0026 17.8 0.1 0.033 14.2 0.0 1.9 1 1 1 2 2 2 1 Replication-relaxation DUF2877 PF11392.8 AID29235.1 - 0.15 12.8 0.0 0.27 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2877) DUF2280 PF10045.9 AID29236.1 - 1.6e-44 150.4 0.2 2.5e-44 149.7 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2280) Terminase_6 PF03237.15 AID29237.1 - 2.5e-65 220.2 0.0 3.3e-65 219.8 0.0 1.2 1 0 0 1 1 1 1 Terminase-like family Terminase_6C PF17289.2 AID29237.1 - 3.2e-30 105.3 0.0 4.5e-30 104.8 0.0 1.2 1 0 0 1 1 1 1 Terminase RNaseH-like domain Pyrid_ox_like PF16242.5 AID29238.1 - 2.7e-09 36.8 0.0 3e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like DUF1073 PF06381.11 AID29239.1 - 1.4e-119 399.1 0.0 1.6e-119 398.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1073) DUF2213 PF09979.9 AID29241.1 - 8.8e-57 191.7 0.2 8.8e-57 191.7 0.2 1.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2213) DUF2190 PF09956.9 AID29242.1 - 4.6e-14 52.7 7.3 5.5e-14 52.5 7.3 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2190) DUF2184 PF09950.9 AID29243.1 - 3.5e-92 308.3 0.0 4.2e-92 308.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2184) VRR_NUC PF08774.11 AID29245.1 - 0.18 11.9 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 VRR-NUC domain Phage_Mu_F PF04233.14 AID29247.1 - 0.017 15.9 0.2 0.23 12.2 0.2 2.2 1 1 0 1 1 1 0 Phage Mu protein F like protein DUF4128 PF13554.6 AID29249.1 - 9.6e-36 122.7 0.3 1.1e-35 122.5 0.3 1.0 1 0 0 1 1 1 1 Bacteriophage related domain of unknown function YaeQ PF07152.12 AID29250.1 - 0.12 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 YaeQ protein Phage_TAC_11 PF11836.8 AID29252.1 - 0.064 13.4 0.0 0.088 12.9 0.0 1.3 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Lipase_GDSL_2 PF13472.6 AID29261.1 - 3.9e-16 60.0 0.1 7e-16 59.1 0.1 1.4 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID29261.1 - 0.00075 19.5 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Acyl_transf_3 PF01757.22 AID29262.1 - 1.3e-30 106.7 44.6 1.6e-30 106.3 44.6 1.1 1 0 0 1 1 1 1 Acyltransferase family Acyl_transf_3 PF01757.22 AID29263.1 - 3e-24 85.7 35.8 3.8e-24 85.4 35.8 1.1 1 0 0 1 1 1 1 Acyltransferase family Glyco_hydro_108 PF05838.12 AID29265.1 - 5.8e-26 90.8 0.0 9.2e-26 90.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase 108 PG_binding_3 PF09374.10 AID29265.1 - 4e-21 75.1 0.2 7.1e-21 74.3 0.2 1.4 1 0 0 1 1 1 1 Predicted Peptidoglycan domain DUF1515 PF07439.11 AID29268.1 - 8.5e-50 167.5 6.4 1.3e-49 166.9 6.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1515) JAKMIP_CC3 PF16034.5 AID29268.1 - 0.0014 18.6 1.9 0.0019 18.2 1.9 1.1 1 0 0 1 1 1 1 JAKMIP CC3 domain DUF1640 PF07798.11 AID29268.1 - 0.004 17.2 0.6 0.0052 16.8 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Lzipper-MIP1 PF14389.6 AID29268.1 - 0.017 15.4 0.7 0.025 14.9 0.7 1.2 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF4988 PF16378.5 AID29268.1 - 0.025 14.2 0.1 0.037 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function V_ATPase_I PF01496.19 AID29268.1 - 0.031 12.2 0.4 0.037 11.9 0.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Tir_receptor_N PF07490.11 AID29268.1 - 0.056 13.3 1.2 0.069 13.0 1.2 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus DUF3618 PF12277.8 AID29268.1 - 0.12 12.6 5.3 3.2 8.1 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) DUF4747 PF15931.5 AID29270.1 - 1e-13 51.5 0.0 1.1e-13 51.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4747) LON_substr_bdg PF02190.16 AID29273.1 - 0.0066 16.3 0.0 0.0069 16.3 0.0 1.1 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain DUF3102 PF11300.8 AID29274.1 - 1.4e-06 28.6 0.0 1.5e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3102) DUF4021 PF13213.6 AID29275.1 - 0.16 11.9 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4021) DNA_ligase_A_M PF01068.21 AID29276.1 - 5.7e-29 101.2 0.0 7.8e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 AID29276.1 - 2e-08 34.7 0.0 2.7e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 AID29276.1 - 0.001 18.9 0.1 0.0043 16.9 0.0 2.0 2 1 0 2 2 2 1 mRNA capping enzyme, catalytic domain DUF768 PF05589.11 AID29277.1 - 1.8e-24 85.5 0.1 1.9e-24 85.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF768) SRAP PF02586.14 AID29280.1 - 1.7e-52 178.2 0.0 2e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) NinF PF05810.12 AID29282.1 - 0.021 14.7 0.1 0.96 9.4 0.0 2.3 2 0 0 2 2 2 0 NinF protein RepB PF07506.11 AID29283.1 - 1.9e-52 178.0 0.0 2.5e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 RepB plasmid partitioning protein Resolvase PF00239.21 AID29284.1 - 1.7e-24 86.6 0.3 2.8e-24 85.9 0.3 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain Recombinase PF07508.13 AID29284.1 - 5.6e-17 62.1 0.0 1.3e-16 60.9 0.0 1.6 2 0 0 2 2 2 1 Recombinase Gly-zipper_Omp PF13488.6 AID29285.1 - 3.4e-09 36.5 14.3 0.0002 21.3 6.2 2.2 2 0 0 2 2 2 2 Glycine zipper Gly-zipper_YMGG PF13441.6 AID29285.1 - 1.6e-08 34.1 21.5 3.3e-08 33.1 21.5 1.5 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 AID29285.1 - 1.2e-06 28.2 22.3 1.2e-06 28.2 22.3 1.6 2 0 0 2 2 2 1 Glycine zipper 2TM domain Gly-zipper_OmpA PF13436.6 AID29285.1 - 0.00081 19.1 24.1 0.014 15.2 6.4 2.4 1 1 0 1 1 1 1 Glycine-zipper domain DUF456 PF04306.13 AID29285.1 - 0.0036 17.6 2.6 0.0049 17.2 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) TraT PF05818.12 AID29285.1 - 0.012 15.3 8.3 0.015 15.0 8.3 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein MLTD_N PF06474.12 AID29285.1 - 0.043 14.0 4.0 0.043 14.0 4.0 2.0 2 0 0 2 2 2 0 MltD lipid attachment motif Chorion_3 PF05387.11 AID29285.1 - 0.47 10.1 4.0 0.46 10.1 4.0 1.0 1 0 0 1 1 1 0 Chorion family 3 LPAM_1 PF08139.12 AID29285.1 - 3.4 8.3 8.5 0.2 12.2 3.1 1.9 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site DUF3482 PF11981.8 AID29285.1 - 3.5 6.9 9.2 4.1 6.7 9.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Romo1 PF10247.9 AID29285.1 - 5.7 7.4 10.2 6.3 7.2 0.3 2.2 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Methyltransf_23 PF13489.6 AID29286.1 - 2.9e-08 33.7 0.0 4.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID29286.1 - 0.00022 21.9 0.0 0.00032 21.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29286.1 - 0.0012 19.5 0.0 0.0018 18.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID29286.1 - 0.074 12.8 0.0 0.094 12.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 AID29286.1 - 0.095 13.4 0.0 0.14 12.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain SNase PF00565.17 AID29287.1 - 9.1e-11 42.2 0.0 1.2e-10 41.9 0.0 1.1 1 0 0 1 1 1 1 Staphylococcal nuclease homologue GGDEF PF00990.21 AID29290.1 - 2.7e-36 124.8 0.0 3.3e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Glycos_transf_1 PF00534.20 AID29292.1 - 1.3e-15 57.3 0.0 1.7e-15 57.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID29292.1 - 1.3e-11 44.7 0.0 2.4e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID29292.1 - 1.8e-09 38.2 0.0 3e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 EutK_C PF16365.5 AID29292.1 - 0.081 13.0 0.7 0.36 10.9 0.2 2.2 1 1 1 2 2 2 0 Ethanolamine utilization protein EutK C-terminus CitMHS PF03600.16 AID29293.1 - 3.5e-36 124.9 56.0 8.1e-31 107.3 36.2 2.1 1 1 1 2 2 2 2 Citrate transporter ArsB PF02040.15 AID29293.1 - 9.1e-15 54.9 22.4 1.1e-14 54.6 22.4 1.1 1 0 0 1 1 1 1 Arsenical pump membrane protein NhaB PF06450.12 AID29293.1 - 0.0022 16.9 0.7 0.0022 16.9 0.7 3.0 2 1 1 3 3 3 2 Bacterial Na+/H+ antiporter B (NhaB) DUF1921 PF09081.10 AID29293.1 - 1.2 9.4 3.7 2.7 8.3 0.3 3.0 3 1 0 3 3 3 0 Domain of unknown function (DUF1921) Rax2 PF12768.7 AID29293.1 - 1.4 8.4 3.0 6.3 6.2 3.0 2.3 1 1 0 1 1 1 0 Cortical protein marker for cell polarity TetR_N PF00440.23 AID29295.1 - 1.7e-17 63.0 0.8 4.1e-17 61.7 0.8 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID29295.1 - 0.02 15.1 0.4 0.071 13.3 0.1 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain HTH_28 PF13518.6 AID29295.1 - 0.025 14.7 0.0 0.14 12.3 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain ECH_1 PF00378.20 AID29296.1 - 1.5e-57 194.8 0.0 1.8e-57 194.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID29296.1 - 2.9e-46 158.5 0.0 1.2e-42 146.7 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase adh_short_C2 PF13561.6 AID29298.1 - 7.7e-40 136.9 3.3 1e-39 136.5 3.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID29298.1 - 9.7e-33 113.3 0.5 1.2e-32 112.9 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID29298.1 - 6.2e-13 49.0 3.8 8.2e-13 48.7 3.8 1.1 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 AID29298.1 - 0.002 18.4 0.4 0.0032 17.7 0.4 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Abhydrolase_1 PF00561.20 AID29299.1 - 5.4e-27 95.1 0.0 6.1e-25 88.3 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29299.1 - 1.4e-14 55.2 8.0 1.7e-14 54.9 8.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29299.1 - 1.8e-05 24.1 0.0 0.00028 20.2 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 zf-CGNR PF11706.8 AID29300.1 - 1.1e-19 70.0 7.1 1.9e-19 69.2 7.1 1.4 1 0 0 1 1 1 1 CGNR zinc finger ABATE PF07336.11 AID29300.1 - 2.9e-16 60.3 5.1 4.4e-16 59.7 5.1 1.3 1 0 0 1 1 1 1 Putative stress-induced transcription regulator Cupredoxin_1 PF13473.6 AID29301.1 - 2.3e-11 43.7 0.0 2.6e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 AID29301.1 - 1.3e-08 35.2 0.3 0.0006 20.2 0.1 2.1 1 1 1 2 2 2 2 Copper binding proteins, plastocyanin/azurin family zinc-ribbons_6 PF07191.12 AID29301.1 - 0.22 11.5 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 zinc-ribbons DUF4142 PF13628.6 AID29302.1 - 6e-37 127.0 10.3 7.2e-37 126.7 10.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) DUF305 PF03713.13 AID29302.1 - 0.00062 19.9 2.5 0.01 16.0 2.5 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF305) Sigma70_r2 PF04542.14 AID29303.1 - 6.2e-18 64.3 2.3 1.1e-17 63.6 2.3 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID29303.1 - 1.4e-15 56.6 0.5 1.1e-14 53.8 0.1 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID29303.1 - 3.3e-08 32.9 0.1 3.3e-08 32.9 0.1 2.2 3 0 0 3 3 3 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID29303.1 - 1.7e-07 31.3 1.7 4.1e-07 30.1 1.7 1.6 1 1 0 1 1 1 1 ECF sigma factor HTH_30 PF13556.6 AID29303.1 - 0.00042 20.1 0.3 0.0018 18.0 0.0 2.1 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 AID29303.1 - 0.035 13.9 0.1 0.13 12.1 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_Crp_2 PF13545.6 AID29303.1 - 0.039 13.9 0.5 0.2 11.7 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID29303.1 - 0.05 13.0 0.1 0.19 11.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 GerE PF00196.19 AID29303.1 - 0.11 12.0 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HPP PF04982.13 AID29304.1 - 7.8e-39 132.6 15.4 7.8e-39 132.6 15.4 1.9 3 0 0 3 3 3 1 HPP family CBS PF00571.28 AID29304.1 - 4.5e-18 65.4 0.1 1.3e-09 38.4 0.0 2.5 2 0 0 2 2 2 2 CBS domain Cys_Met_Meta_PP PF01053.20 AID29305.1 - 7.2e-105 350.6 0.0 1.1e-104 350.1 0.0 1.2 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID29305.1 - 6e-06 25.4 0.0 1e-05 24.7 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class-V DUF4350 PF14258.6 AID29305.1 - 0.0015 18.9 0.1 0.079 13.4 0.1 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF4350) DegT_DnrJ_EryC1 PF01041.17 AID29305.1 - 0.0021 17.4 0.2 0.0033 16.8 0.2 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF1326 PF07040.11 AID29306.1 - 2.4e-56 190.6 0.1 2.8e-56 190.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1326) DUF2182 PF09948.9 AID29307.1 - 1.4e-65 220.7 18.9 1.4e-65 220.7 18.9 1.6 2 0 0 2 2 2 1 Predicted metal-binding integral membrane protein (DUF2182) SBP_bac_3 PF00497.20 AID29308.1 - 7.7e-26 90.9 0.0 1e-25 90.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 BPD_transp_1 PF00528.22 AID29309.1 - 3.8e-13 49.6 8.5 3.8e-13 49.6 8.5 3.1 1 1 2 3 3 3 2 Binding-protein-dependent transport system inner membrane component DUF502 PF04367.13 AID29309.1 - 6.5 6.7 9.7 0.21 11.5 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF502) BPD_transp_1 PF00528.22 AID29310.1 - 7.3e-21 74.7 11.4 7.3e-21 74.7 11.4 3.0 1 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID29311.1 - 8.5e-39 133.2 0.0 1.2e-38 132.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29311.1 - 2e-09 37.7 0.0 6.7e-05 22.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29311.1 - 1.2e-06 28.2 0.0 0.00012 21.6 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID29311.1 - 0.00015 21.5 0.0 0.00028 20.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID29311.1 - 0.00029 20.8 0.0 0.00049 20.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID29311.1 - 0.00061 20.1 0.1 0.0011 19.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID29311.1 - 0.00084 19.8 0.0 1.2 9.6 0.0 2.4 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID29311.1 - 0.0015 19.0 0.1 0.0034 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID29311.1 - 0.0018 18.7 0.0 0.0021 18.5 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID29311.1 - 0.0038 17.0 0.0 0.0076 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 AID29311.1 - 0.0058 16.6 0.0 0.0077 16.2 0.0 1.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea SbcCD_C PF13558.6 AID29311.1 - 0.0065 16.7 0.3 0.093 13.0 0.3 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 AID29311.1 - 0.0069 16.9 0.0 0.012 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 AID29311.1 - 0.0074 16.7 0.0 0.078 13.4 0.0 2.3 2 0 0 2 2 2 1 RNA helicase cobW PF02492.19 AID29311.1 - 0.0089 15.6 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Rad17 PF03215.15 AID29311.1 - 0.0091 15.9 0.7 0.027 14.4 0.1 2.0 1 1 1 2 2 2 1 Rad17 P-loop domain T2SSE PF00437.20 AID29311.1 - 0.014 14.5 0.0 0.024 13.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_13 PF13166.6 AID29311.1 - 0.014 14.1 0.0 2.6 6.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID29311.1 - 0.017 14.8 0.0 0.29 10.8 0.0 2.1 1 1 1 2 2 2 0 AAA ATPase domain RNA12 PF10443.9 AID29311.1 - 0.019 13.7 0.0 0.028 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein ABC_ATPase PF09818.9 AID29311.1 - 0.021 13.7 0.0 5.1 5.8 0.0 2.6 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_10 PF12846.7 AID29311.1 - 0.024 13.6 0.0 0.041 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_33 PF13671.6 AID29311.1 - 0.026 14.7 0.0 0.048 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID29311.1 - 0.03 14.2 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase TniB PF05621.11 AID29311.1 - 0.036 13.5 0.1 6.3 6.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein G-alpha PF00503.20 AID29311.1 - 0.042 13.0 0.0 0.11 11.7 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit AAA_24 PF13479.6 AID29311.1 - 0.043 13.5 0.0 0.075 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AID29311.1 - 0.043 13.5 0.0 0.058 13.1 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DEAD PF00270.29 AID29311.1 - 0.059 13.1 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase TK PF00265.18 AID29311.1 - 0.074 12.9 0.0 0.84 9.5 0.0 2.2 2 0 0 2 2 2 0 Thymidine kinase Mg_chelatase PF01078.21 AID29311.1 - 0.075 12.4 0.0 0.33 10.3 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI FtsK_SpoIIIE PF01580.18 AID29311.1 - 0.075 12.4 0.1 0.14 11.4 0.0 1.5 2 0 0 2 2 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 AID29311.1 - 0.089 13.0 0.0 0.21 11.8 0.0 1.6 2 0 0 2 2 1 0 AAA domain Sigma54_activat PF00158.26 AID29311.1 - 0.11 12.2 0.1 0.25 11.1 0.0 1.5 2 0 0 2 2 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 AID29311.1 - 0.12 11.8 0.0 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Viral_helicase1 PF01443.18 AID29311.1 - 0.12 12.0 0.1 0.25 11.1 0.0 1.7 2 0 0 2 2 1 0 Viral (Superfamily 1) RNA helicase FAD_binding_3 PF01494.19 AID29312.1 - 1e-21 77.6 2.6 2.3e-21 76.4 2.6 1.6 1 1 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 AID29312.1 - 1.2e-05 24.7 0.0 0.0067 15.7 0.0 2.2 2 0 0 2 2 2 2 Thi4 family Pyr_redox PF00070.27 AID29312.1 - 1.5e-05 25.5 0.0 0.00039 20.9 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID29312.1 - 2.6e-05 24.3 0.4 7.8e-05 22.8 0.4 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AID29312.1 - 3.6e-05 23.0 0.6 3.6e-05 23.0 0.6 2.2 2 1 1 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 AID29312.1 - 6.2e-05 22.4 0.3 0.00094 18.5 0.1 2.0 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID29312.1 - 0.00017 21.3 6.4 0.00046 19.9 0.4 2.7 1 1 1 3 3 3 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID29312.1 - 0.00079 18.4 0.1 0.021 13.7 0.0 2.1 2 0 0 2 2 2 1 Tryptophan halogenase GIDA PF01134.22 AID29312.1 - 0.0011 18.2 0.4 0.0015 17.7 0.4 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 AID29312.1 - 0.004 15.9 0.3 0.006 15.3 0.3 1.2 1 0 0 1 1 1 1 HI0933-like protein FAD_oxidored PF12831.7 AID29312.1 - 0.012 15.0 0.4 0.019 14.3 0.4 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 AID29312.1 - 0.042 13.1 0.1 0.088 12.1 0.1 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain SE PF08491.10 AID29312.1 - 0.078 12.0 0.0 0.18 10.8 0.0 1.5 2 0 0 2 2 2 0 Squalene epoxidase DUF1834 PF08873.11 AID29312.1 - 0.12 12.1 0.3 0.32 10.7 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1834) 3HCDH_N PF02737.18 AID29312.1 - 0.15 12.0 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain zf-CHCC PF10276.9 AID29313.1 - 1.2e-12 47.7 2.6 1.6e-12 47.2 0.5 2.0 2 0 0 2 2 2 1 Zinc-finger domain zf_C2H2_6 PF18450.1 AID29313.1 - 0.025 14.3 0.5 0.044 13.5 0.5 1.4 1 0 0 1 1 1 0 Zinc Finger domain PP_kinase_C_1 PF17941.1 AID29315.1 - 3.5e-76 254.4 0.1 6.5e-76 253.5 0.0 1.5 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 1 PP_kinase_C PF13090.6 AID29315.1 - 1e-61 207.4 0.0 6.8e-61 204.7 0.0 2.0 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 2 PP_kinase PF02503.17 AID29315.1 - 1.2e-60 204.6 0.0 2e-60 203.9 0.0 1.4 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.6 AID29315.1 - 5.4e-35 119.9 0.3 1.1e-34 119.0 0.3 1.6 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 AID29315.1 - 1.8e-14 53.7 0.0 6.2e-07 29.4 0.0 2.7 2 1 0 2 2 2 2 PLD-like domain MR_MLE_C PF13378.6 AID29315.1 - 0.13 11.8 0.6 0.22 11.0 0.6 1.3 1 0 0 1 1 1 0 Enolase C-terminal domain-like Ppx-GppA PF02541.16 AID29316.1 - 8.6e-45 153.4 0.0 1.2e-44 152.8 0.0 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DoxX PF07681.12 AID29317.1 - 6.5e-20 71.5 14.0 6.5e-20 71.5 14.0 1.5 2 0 0 2 2 2 1 DoxX SURF4 PF02077.15 AID29317.1 - 0.0038 16.9 0.7 0.0098 15.5 0.3 1.7 2 0 0 2 2 2 1 SURF4 family TMEM101 PF15111.6 AID29317.1 - 0.023 14.2 0.2 0.026 14.1 0.2 1.1 1 0 0 1 1 1 0 TMEM101 protein family DoxD PF04173.13 AID29317.1 - 0.06 13.2 3.2 0.08 12.8 2.5 1.5 1 1 0 1 1 1 0 TQO small subunit DoxD DoxX_2 PF13564.6 AID29317.1 - 0.88 9.7 14.5 1.1 9.4 13.4 1.8 1 1 1 2 2 2 0 DoxX-like family DoxX PF07681.12 AID29318.1 - 1.4e-19 70.4 17.4 2.3e-19 69.8 17.4 1.3 1 0 0 1 1 1 1 DoxX SURF4 PF02077.15 AID29318.1 - 6.1e-07 29.3 3.8 1.5e-06 28.0 3.8 1.7 1 1 0 1 1 1 1 SURF4 family DoxD PF04173.13 AID29318.1 - 3.7e-06 26.9 1.7 3.7e-06 26.9 1.7 1.6 2 0 0 2 2 2 1 TQO small subunit DoxD DoxX_2 PF13564.6 AID29318.1 - 1.4e-05 25.2 15.9 2.4e-05 24.4 15.8 1.5 1 1 0 1 1 1 1 DoxX-like family TMEM101 PF15111.6 AID29318.1 - 0.034 13.7 3.6 0.053 13.1 1.4 1.9 1 1 1 2 2 2 0 TMEM101 protein family HR_lesion PF05514.11 AID29318.1 - 0.21 11.7 5.2 4.9 7.3 1.3 2.3 1 1 1 2 2 2 0 HR-like lesion-inducing MerC PF03203.14 AID29318.1 - 3.2 8.2 11.6 5.1 7.6 10.7 1.7 1 1 1 2 2 2 0 MerC mercury resistance protein Lyase_1 PF00206.20 AID29319.1 - 3.9e-114 381.2 0.1 4.8e-114 380.9 0.1 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 AID29319.1 - 1.6e-23 82.8 0.3 3.6e-23 81.7 0.3 1.6 1 0 0 1 1 1 1 Fumarase C C-terminus Cupin_2 PF07883.11 AID29320.1 - 2e-15 56.3 0.2 3e-15 55.7 0.2 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID29320.1 - 2.5e-07 30.7 0.0 3.3e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.12 AID29320.1 - 3.7e-05 23.5 0.0 5.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding_2 PF14525.6 AID29320.1 - 0.00065 19.4 0.2 0.00083 19.1 0.2 1.1 1 0 0 1 1 1 1 AraC-binding-like domain Cupin_3 PF05899.12 AID29320.1 - 0.00067 19.3 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 AID29320.1 - 0.0052 16.4 0.0 0.008 15.8 0.0 1.3 1 0 0 1 1 1 1 Cupin DMSP_lyase PF16867.5 AID29320.1 - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase HTH_1 PF00126.27 AID29321.1 - 3.7e-17 62.0 0.1 7.5e-17 61.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID29321.1 - 4.5e-17 62.1 6.3 6.2e-17 61.7 6.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_AsnC-type PF13404.6 AID29321.1 - 0.017 14.9 0.2 0.054 13.3 0.2 2.0 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain TetR_C_6 PF13977.6 AID29322.1 - 1.5e-24 86.4 0.5 1.5e-24 86.4 0.5 2.2 2 1 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 AID29322.1 - 3.5e-12 45.9 1.7 6.2e-12 45.1 1.7 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family OpuAC PF04069.12 AID29323.1 - 5.5e-47 160.5 0.1 6.5e-47 160.3 0.1 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Abhydrolase_1 PF00561.20 AID29324.1 - 7e-30 104.5 0.2 2.4e-24 86.4 0.5 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29324.1 - 3.7e-25 89.8 14.1 4.9e-25 89.4 14.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29324.1 - 6.3e-22 78.0 0.1 9.8e-22 77.4 0.1 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 AID29324.1 - 3.5e-07 30.6 0.1 5.5e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Thioesterase domain Ndr PF03096.14 AID29324.1 - 1.4e-06 27.2 0.0 0.00033 19.4 0.1 2.1 2 0 0 2 2 2 2 Ndr family Esterase PF00756.20 AID29324.1 - 0.00048 19.9 0.3 0.0016 18.1 0.0 2.1 2 1 1 3 3 3 1 Putative esterase Abhydrolase_2 PF02230.16 AID29324.1 - 0.0015 18.4 0.0 0.028 14.2 0.0 2.4 3 0 0 3 3 3 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 AID29324.1 - 0.0095 15.7 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Chlorophyllase PF07224.11 AID29324.1 - 0.017 14.1 0.1 0.087 11.8 0.1 1.8 1 1 0 1 1 1 0 Chlorophyllase Abhydrolase_3 PF07859.13 AID29324.1 - 0.034 14.0 0.3 0.24 11.2 0.2 2.2 2 1 0 2 2 2 0 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 AID29324.1 - 0.045 13.6 0.1 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase Lipase_3 PF01764.25 AID29324.1 - 0.051 13.4 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_4 PF08386.10 AID29324.1 - 0.11 12.6 0.0 0.36 11.0 0.0 1.8 2 0 0 2 2 2 0 TAP-like protein FSH1 PF03959.13 AID29324.1 - 0.13 11.9 0.0 1.7 8.3 0.0 2.4 2 1 0 2 2 2 0 Serine hydrolase (FSH1) LIDHydrolase PF10230.9 AID29324.1 - 0.13 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Chlorophyllase2 PF12740.7 AID29324.1 - 0.15 11.0 0.0 0.35 9.7 0.0 1.5 1 1 0 1 1 1 0 Chlorophyllase enzyme BAAT_C PF08840.11 AID29324.1 - 0.35 10.7 0.6 1.7 8.5 0.0 1.9 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal NIPSNAP PF07978.13 AID29325.1 - 1.2e-44 150.7 0.8 2.6e-22 78.9 0.5 2.1 2 0 0 2 2 2 2 NIPSNAP TetR_C_13 PF16925.5 AID29326.1 - 1.1e-13 51.1 0.1 1.8e-13 50.4 0.1 1.4 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID29326.1 - 4.8e-11 42.3 0.8 4.8e-11 42.3 0.8 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_14 PF17754.1 AID29326.1 - 5.4e-05 23.1 2.5 5.4e-05 23.1 2.5 1.9 1 1 1 2 2 2 1 MftR C-terminal domain TetR_C_6 PF13977.6 AID29326.1 - 0.041 14.1 7.1 0.038 14.2 3.4 2.3 1 1 1 2 2 2 0 BetI-type transcriptional repressor, C-terminal Peripla_BP_3 PF13377.6 AID29327.1 - 7.9e-33 114.1 1.8 2.4e-32 112.6 0.3 2.3 3 0 0 3 3 3 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID29327.1 - 6.8e-29 101.2 0.0 1.4e-28 100.2 0.0 1.5 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 AID29327.1 - 5.3e-16 59.0 0.0 8.7e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 AID29327.1 - 3.5e-12 45.9 1.4 3.5e-12 45.9 1.4 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_31 PF13560.6 AID29327.1 - 0.01 16.2 1.9 0.021 15.2 0.3 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID29327.1 - 0.082 12.7 0.1 0.25 11.2 0.1 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain SBP_bac_3 PF00497.20 AID29328.1 - 1.1e-56 191.8 0.1 1.3e-56 191.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID29328.1 - 3.3e-07 30.5 0.0 3.2e-06 27.3 0.0 2.2 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 AID29328.1 - 3e-05 24.1 0.1 0.065 13.2 0.1 2.3 1 1 1 2 2 2 2 NMT1/THI5 like ABC_tran PF00005.27 AID29329.1 - 1.6e-34 119.3 0.0 3e-34 118.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter BPD_transp_1 PF00528.22 AID29329.1 - 1.2e-20 74.0 7.5 1.8e-20 73.5 7.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component AAA_21 PF13304.6 AID29329.1 - 2.5e-11 43.9 0.0 8.9e-05 22.4 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29329.1 - 2.9e-07 30.2 0.1 0.0011 18.4 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID29329.1 - 2.9e-05 23.7 0.1 6.5e-05 22.6 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID29329.1 - 8.9e-05 22.3 0.0 0.00017 21.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID29329.1 - 0.00015 22.2 0.1 0.00033 21.1 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID29329.1 - 0.00018 21.8 0.2 0.0011 19.2 0.2 2.1 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 AID29329.1 - 0.00095 18.1 1.1 0.24 10.2 0.1 2.8 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 AID29329.1 - 0.0044 17.5 0.0 0.0069 16.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID29329.1 - 0.0099 15.8 0.1 0.022 14.7 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 AID29329.1 - 0.021 14.8 0.1 0.82 9.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_15 PF13175.6 AID29329.1 - 0.025 14.3 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 AID29329.1 - 0.028 14.6 0.0 0.045 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain HHH_6 PF14579.6 AID29329.1 - 0.029 14.6 0.1 0.14 12.4 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix motif ATPase_2 PF01637.18 AID29329.1 - 0.032 14.1 0.0 1.8 8.4 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 AID29329.1 - 0.037 14.6 0.0 0.094 13.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF3987 PF13148.6 AID29329.1 - 0.063 12.3 0.0 0.1 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) AAA PF00004.29 AID29329.1 - 0.11 12.9 0.1 2 8.9 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Adeno_IVa2 PF02456.15 AID29329.1 - 0.14 11.0 0.2 0.25 10.1 0.0 1.4 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_24 PF13479.6 AID29329.1 - 0.19 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID29329.1 - 0.21 11.8 0.2 3 8.2 0.2 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF2613 PF11021.8 AID29329.1 - 8.1 6.6 7.5 0.45 10.7 1.5 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF2613) DAO PF01266.24 AID29330.1 - 4.6e-37 128.4 4.2 5.8e-37 128.1 4.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID29330.1 - 8.3e-07 28.4 4.8 3.3e-06 26.5 4.8 1.8 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID29330.1 - 2e-05 24.0 0.6 0.00016 21.0 0.6 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID29330.1 - 4.4e-05 22.7 2.3 0.00073 18.7 0.3 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 AID29330.1 - 0.00014 21.3 0.5 0.00034 20.1 0.2 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 AID29330.1 - 0.0013 17.5 0.8 0.12 11.0 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 AID29330.1 - 0.0073 15.6 2.0 0.011 15.0 2.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 AID29330.1 - 0.0081 16.7 1.9 0.016 15.8 0.8 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID29330.1 - 0.065 12.5 0.3 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 AID29330.1 - 0.082 12.2 0.6 0.14 11.4 0.6 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 AID29330.1 - 0.091 12.8 2.5 2.7 8.0 0.2 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID29330.1 - 0.11 12.7 2.9 0.27 11.5 1.9 2.2 1 1 1 2 2 2 0 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 AID29330.1 - 0.16 11.8 0.1 0.31 10.9 0.1 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID29330.1 - 0.3 10.1 1.2 0.39 9.7 0.1 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein PepSY_2 PF13670.6 AID29332.1 - 0.082 12.9 0.8 0.12 12.4 0.8 1.3 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain Metallophos PF00149.28 AID29334.1 - 1.8e-12 48.2 3.5 2.3e-12 47.9 3.5 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CsbD PF05532.12 AID29335.1 - 8.1e-21 73.7 14.3 9e-21 73.5 14.3 1.0 1 0 0 1 1 1 1 CsbD-like DctP PF03480.13 AID29335.1 - 0.031 13.6 0.1 0.032 13.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 GST_N_3 PF13417.6 AID29336.1 - 4e-11 43.2 0.0 6.9e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID29336.1 - 9.5e-10 38.6 0.0 1.5e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID29336.1 - 1.3e-08 35.1 0.0 2.4e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID29336.1 - 1.5e-06 28.1 0.1 3e-06 27.1 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID29336.1 - 0.036 14.2 0.0 0.061 13.5 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 AID29336.1 - 0.051 13.9 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein YCII PF03795.14 AID29337.1 - 5.1e-13 49.2 0.0 6e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 YCII-related domain CSD PF00313.22 AID29338.1 - 3e-22 78.2 0.1 3.1e-22 78.2 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID29338.1 - 1.1e-05 24.9 0.2 1.2e-05 24.9 0.2 1.2 1 0 0 1 1 1 1 Ribonuclease B OB domain Rho_RNA_bind PF07497.12 AID29338.1 - 0.0067 16.3 0.0 0.008 16.0 0.0 1.3 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain CxxCxxCC PF03692.15 AID29342.1 - 6.7e-08 33.1 6.8 8.8e-08 32.7 6.8 1.2 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain LysE PF01810.18 AID29343.1 - 7.5e-36 123.4 13.5 8.5e-36 123.2 13.5 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 AID29343.1 - 0.099 12.3 4.3 0.23 11.1 4.3 1.9 1 1 0 1 1 1 0 Integral membrane protein TerC family ISK_Channel PF02060.15 AID29343.1 - 0.13 11.9 0.3 0.23 11.2 0.3 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel SnoaL_2 PF12680.7 AID29344.1 - 6.9e-19 68.4 0.5 8.1e-19 68.2 0.5 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 AID29344.1 - 5e-12 45.7 0.1 1.2e-10 41.3 0.1 2.0 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase DUF4440 PF14534.6 AID29344.1 - 7.5e-05 23.1 0.1 8.9e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) OsmC PF02566.19 AID29345.1 - 2.9e-17 63.0 0.1 3.7e-17 62.7 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein ADH_zinc_N PF00107.26 AID29346.1 - 1.6e-19 70.1 0.3 2.5e-19 69.5 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID29346.1 - 9.9e-19 68.7 0.1 2.3e-18 67.5 0.1 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID29346.1 - 1.4e-09 37.8 0.0 1.3e-08 34.7 0.0 2.1 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 AID29346.1 - 8.2e-05 22.0 0.4 0.00013 21.4 0.4 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 AID29346.1 - 0.0012 19.0 0.0 0.0024 18.1 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain PALP PF00291.25 AID29346.1 - 0.053 12.9 0.2 0.08 12.3 0.2 1.2 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme XdhC_C PF13478.6 AID29346.1 - 0.063 13.8 0.0 0.089 13.3 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain TetR_N PF00440.23 AID29347.1 - 9.1e-14 51.0 0.0 2.6e-13 49.6 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID29347.1 - 0.019 15.1 12.4 0.031 14.5 7.8 2.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TadE PF07811.12 AID29348.1 - 1.1e-12 48.0 2.1 1.1e-12 48.0 2.1 1.7 2 0 0 2 2 2 1 TadE-like protein Flp_Fap PF04964.14 AID29348.1 - 0.00039 20.2 0.0 0.0011 18.8 0.0 1.8 1 0 0 1 1 1 1 Flp/Fap pilin component Tad PF13400.6 AID29348.1 - 0.0025 18.1 0.6 0.0047 17.2 0.6 1.5 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like TadE PF07811.12 AID29349.1 - 1.9e-07 31.2 0.1 4.9e-07 29.9 0.1 1.7 1 0 0 1 1 1 1 TadE-like protein Tad PF13400.6 AID29349.1 - 0.0034 17.7 0.1 0.0034 17.7 0.1 2.5 3 0 0 3 3 3 1 Putative Flp pilus-assembly TadE/G-like Tad PF13400.6 AID29350.1 - 3.3e-09 36.9 4.3 3.3e-09 36.9 4.3 3.1 3 0 0 3 3 3 1 Putative Flp pilus-assembly TadE/G-like Cpn60_TCP1 PF00118.24 AID29351.1 - 9.1e-98 328.0 25.1 2e-97 326.9 25.1 1.5 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family ChlI PF13541.6 AID29351.1 - 0.048 13.5 4.6 0.061 13.2 0.8 2.5 2 0 0 2 2 2 0 Subunit ChlI of Mg-chelatase Cpn10 PF00166.21 AID29352.1 - 2.9e-36 123.4 0.1 3.2e-36 123.3 0.1 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit TetR_C_22 PF17928.1 AID29353.1 - 3.7e-24 85.2 0.8 7e-24 84.3 0.8 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID29353.1 - 4e-13 48.9 0.0 8.8e-13 47.8 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 AID29353.1 - 0.033 14.9 2.5 0.047 14.4 0.6 2.2 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain MFS_1 PF07690.16 AID29354.1 - 3.1e-15 56.0 52.8 9.4e-08 31.4 20.5 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily ALO PF04030.14 AID29355.1 - 1.5e-41 142.9 0.0 1.9e-41 142.6 0.0 1.1 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase FAD_binding_4 PF01565.23 AID29355.1 - 1.4e-20 73.5 0.8 1.9e-20 73.0 0.8 1.2 1 0 0 1 1 1 1 FAD binding domain ALO PF04030.14 AID29356.1 - 2e-09 37.6 0.1 2.1e-09 37.6 0.1 1.0 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase Ala_racemase_N PF01168.20 AID29357.1 - 5.6e-20 71.9 0.0 8.8e-20 71.3 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain MarR_2 PF12802.7 AID29358.1 - 3e-15 55.8 0.5 7.2e-15 54.6 0.5 1.7 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID29358.1 - 3.8e-12 45.9 0.3 1.4e-11 44.2 0.0 2.1 2 0 0 2 2 2 1 MarR family Acetyltransf_10 PF13673.7 AID29358.1 - 4.7e-12 45.9 0.0 7.9e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID29358.1 - 5.6e-12 45.9 0.1 1e-11 45.1 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID29358.1 - 1.3e-10 41.5 0.0 3.3e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID29358.1 - 2.2e-05 24.4 0.0 4.7e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 AID29358.1 - 7.6e-05 22.9 1.8 0.00016 21.8 0.1 2.3 2 1 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID29358.1 - 0.00014 21.9 0.0 0.00027 21.0 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase HTH_27 PF13463.6 AID29358.1 - 0.00021 21.7 0.1 0.00041 20.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 AID29358.1 - 0.00024 20.6 0.0 0.00046 19.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 AID29358.1 - 0.00044 20.4 0.0 0.00077 19.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 AID29358.1 - 0.00064 19.7 0.1 0.0015 18.5 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 AID29358.1 - 0.0017 18.2 0.0 0.0043 16.9 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 AID29358.1 - 0.0054 16.8 0.2 0.013 15.5 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Acetyltransf_9 PF13527.7 AID29358.1 - 0.014 15.4 0.0 0.18 11.9 0.0 2.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain HTH_IclR PF09339.10 AID29358.1 - 0.037 13.8 0.1 0.091 12.6 0.1 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain Crp PF00325.20 AID29358.1 - 0.057 13.1 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Glyco_hydro_26 PF02156.15 AID29358.1 - 0.1 12.0 0.0 0.25 10.7 0.0 1.5 2 0 0 2 2 2 0 Glycosyl hydrolase family 26 HTH_26 PF13443.6 AID29358.1 - 0.11 13.0 0.0 0.2 12.1 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain PanZ PF12568.8 AID29358.1 - 0.11 12.2 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ B-block_TFIIIC PF04182.12 AID29358.1 - 0.12 12.5 0.0 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC ABM PF03992.16 AID29359.1 - 1.5e-14 53.9 0.0 1.9e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase GyrI-like PF06445.15 AID29360.1 - 6.2e-27 94.8 0.0 7.8e-27 94.5 0.0 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 AID29360.1 - 2.9e-23 82.7 0.0 3.5e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein HTH_18 PF12833.7 AID29360.1 - 1.5e-18 66.9 1.6 2.3e-18 66.2 1.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID29360.1 - 9.2e-12 44.8 0.0 5.2e-05 23.2 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Peripla_BP_3 PF13377.6 AID29362.1 - 9.5e-33 113.9 0.9 2.3e-32 112.6 0.5 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID29362.1 - 3.3e-24 85.8 0.0 4.3e-24 85.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 AID29362.1 - 1.3e-19 70.8 0.0 2e-19 70.2 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 AID29362.1 - 5.7e-15 54.8 0.4 5.7e-15 54.8 0.4 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_31 PF13560.6 AID29362.1 - 0.00064 20.0 0.0 0.0017 18.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID29362.1 - 0.0018 18.3 0.0 0.0044 17.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix ANF_receptor PF01094.28 AID29362.1 - 0.0062 15.7 0.0 0.0095 15.1 0.0 1.2 1 0 0 1 1 1 1 Receptor family ligand binding region HTH_38 PF13936.6 AID29362.1 - 0.012 15.3 0.5 0.036 13.8 0.2 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 AID29362.1 - 0.013 15.3 0.1 0.059 13.2 0.1 2.3 1 0 0 1 1 1 0 Homeodomain-like domain YdaS_antitoxin PF15943.5 AID29362.1 - 0.023 14.6 0.1 0.079 12.8 0.0 1.9 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_24 PF13412.6 AID29362.1 - 0.038 13.6 0.1 0.12 12.0 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TetR_N PF00440.23 AID29362.1 - 0.039 13.7 0.1 0.12 12.2 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family MerR PF00376.23 AID29362.1 - 0.057 13.2 0.1 0.14 11.9 0.1 1.7 1 0 0 1 1 1 0 MerR family regulatory protein HTH_35 PF13693.6 AID29362.1 - 0.071 13.2 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Tnp_ISL3 PF13542.6 AID29362.1 - 0.086 12.3 0.3 0.2 11.1 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 LexA_DNA_bind PF01726.16 AID29362.1 - 0.15 11.8 0.3 6.2 6.7 0.0 2.6 2 0 0 2 2 2 0 LexA DNA binding domain ABC_tran PF00005.27 AID29363.1 - 9.2e-55 184.9 0.0 4.4e-32 111.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID29363.1 - 1.8e-10 41.1 0.0 0.0027 17.6 0.0 3.2 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID29363.1 - 8.2e-05 22.3 0.3 0.001 18.8 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID29363.1 - 0.0011 19.0 0.6 0.0046 16.9 0.0 2.0 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 AID29363.1 - 0.0021 17.5 0.0 0.019 14.4 0.0 2.4 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID29363.1 - 0.0036 17.7 0.2 0.023 15.1 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 AID29363.1 - 0.0053 17.3 0.0 0.0093 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AID29363.1 - 0.0089 16.1 0.0 0.16 12.1 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 AID29363.1 - 0.023 14.0 0.2 0.34 10.2 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_27 PF13514.6 AID29363.1 - 0.03 13.9 0.1 0.061 12.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID29363.1 - 0.052 13.1 0.4 1.3 8.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain MukB PF04310.12 AID29363.1 - 0.082 12.7 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 MukB N-terminal TsaE PF02367.17 AID29363.1 - 0.14 12.2 0.5 19 5.3 0.1 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 AID29363.1 - 0.17 11.6 3.4 0.093 12.4 0.2 2.2 2 1 0 2 2 2 0 AAA domain DUF2813 PF11398.8 AID29363.1 - 0.23 10.7 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) BPD_transp_2 PF02653.16 AID29364.1 - 5e-45 153.8 46.0 5e-45 153.8 46.0 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 AID29365.1 - 1.6e-47 162.2 7.9 2.5e-47 161.6 7.9 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID29365.1 - 1.5e-16 60.7 0.2 2.6e-16 59.9 0.2 1.4 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID29365.1 - 2.8e-05 24.5 0.0 4.9e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Bmp PF02608.14 AID29365.1 - 0.0059 15.6 0.1 0.0095 14.9 0.1 1.3 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Tad_C PF09977.9 AID29365.1 - 0.11 13.7 3.6 1.5 10.1 0.1 3.2 2 1 1 3 3 3 0 Putative Tad-like Flp pilus-assembly EamA PF00892.20 AID29366.1 - 1.2e-48 164.7 27.2 2.1e-25 89.5 8.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 AID29366.1 - 0.00018 20.8 2.5 0.083 12.0 0.6 2.3 2 0 0 2 2 2 2 Magnesium transporter NIPA TPT PF03151.16 AID29366.1 - 0.0011 18.3 5.8 0.066 12.5 1.0 2.2 2 0 0 2 2 2 2 Triose-phosphate Transporter family UAA PF08449.11 AID29366.1 - 0.0077 15.5 3.5 0.0094 15.2 0.5 2.1 2 0 0 2 2 2 1 UAA transporter family CRT-like PF08627.10 AID29366.1 - 0.04 12.9 3.2 0.23 10.4 0.2 2.2 2 0 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like DUF2626 PF11117.8 AID29366.1 - 2.8 8.7 7.2 0.82 10.4 1.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2626) DUF1129 PF06570.11 AID29366.1 - 4.2 6.8 6.7 0.52 9.8 0.5 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1129) Methyltransf_23 PF13489.6 AID29367.1 - 4.7e-14 52.6 0.0 6.4e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID29367.1 - 0.0061 17.3 0.2 0.071 13.9 0.2 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29367.1 - 0.31 11.7 0.8 6.5 7.5 0.8 2.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 AID29367.1 - 0.8 10.4 2.4 3.3 8.5 0.3 2.5 2 1 1 3 3 3 0 Methyltransferase domain DUF1636 PF07845.11 AID29368.1 - 5e-28 97.9 0.0 6.2e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1636) 2Fe-2S_thioredx PF01257.19 AID29368.1 - 0.0024 17.7 0.8 0.0033 17.3 0.8 1.1 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin ABC_tran PF00005.27 AID29369.1 - 5.5e-32 111.2 0.0 7e-32 110.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29369.1 - 8.5e-14 52.0 0.1 6.7e-06 26.1 0.1 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AID29369.1 - 0.00074 19.3 0.0 0.017 14.9 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain SbcCD_C PF13558.6 AID29369.1 - 0.001 19.2 0.2 0.023 14.9 0.1 2.5 2 1 0 2 2 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 AID29369.1 - 0.0011 19.6 0.0 0.0015 19.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID29369.1 - 0.0011 19.3 0.1 0.01 16.1 0.1 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID29369.1 - 0.0013 18.2 0.0 0.027 13.9 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID29369.1 - 0.0015 18.3 0.1 0.0028 17.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID29369.1 - 0.0023 18.3 0.6 0.0055 17.1 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 AID29369.1 - 0.0025 17.2 2.3 0.0059 16.0 0.4 2.4 3 2 1 4 4 4 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 AID29369.1 - 0.0028 18.1 0.0 0.041 14.3 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID29369.1 - 0.0056 16.9 0.0 0.043 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID29369.1 - 0.0093 15.7 0.1 0.041 13.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 AID29369.1 - 0.019 14.9 0.0 0.25 11.4 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 AID29369.1 - 0.023 14.9 0.4 0.2 11.8 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID29369.1 - 0.032 14.2 0.2 0.52 10.3 0.1 2.4 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 AID29369.1 - 0.035 13.8 0.0 0.049 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID29369.1 - 0.035 14.0 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase DUF3584 PF12128.8 AID29369.1 - 0.059 10.9 0.1 0.078 10.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NACHT PF05729.12 AID29369.1 - 0.065 13.2 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain MMR_HSR1 PF01926.23 AID29369.1 - 0.08 13.0 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_27 PF13514.6 AID29369.1 - 0.11 12.1 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID29369.1 - 0.14 12.1 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain NTPase_1 PF03266.15 AID29369.1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 NTPase AAA_13 PF13166.6 AID29369.1 - 0.22 10.1 0.0 0.29 9.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain Peripla_BP_2 PF01497.18 AID29370.1 - 1.6e-25 90.1 0.0 2e-25 89.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 AID29371.1 - 6.4e-87 291.5 30.6 7.8e-87 291.2 30.6 1.0 1 0 0 1 1 1 1 FecCD transport family CTP_transf_1 PF01148.20 AID29372.1 - 6.4e-62 209.7 19.3 7.4e-62 209.5 19.3 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family DUF5336 PF17270.2 AID29372.1 - 0.029 14.0 0.7 0.029 14.0 0.7 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5336) Acyltransferase PF01553.21 AID29373.1 - 4.3e-15 55.5 0.0 5.7e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Acyltransferase PAP2_3 PF14378.6 AID29375.1 - 4.4e-06 26.5 8.0 4.4e-06 26.5 8.0 2.6 2 0 0 2 2 2 1 PAP2 superfamily DSPc PF00782.20 AID29375.1 - 0.00092 19.0 0.0 0.0018 18.1 0.0 1.5 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DUF2207 PF09972.9 AID29375.1 - 4 6.1 9.2 0.85 8.3 3.3 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Methyltransf_20 PF12147.8 AID29376.1 - 5.6e-146 485.6 0.0 7.8e-146 485.1 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Hydrolase_4 PF12146.8 AID29376.1 - 1.8e-61 207.4 0.3 3.5e-61 206.5 0.3 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID29376.1 - 4.7e-08 33.0 0.1 2.6e-06 27.3 0.1 2.2 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29376.1 - 0.00037 21.2 15.3 0.0046 17.6 15.3 2.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Methyltransf_25 PF13649.6 AID29376.1 - 0.00087 20.0 0.0 0.0027 18.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain CDP-OH_P_transf PF01066.21 AID29377.1 - 8.8e-11 42.4 0.9 8.8e-11 42.4 0.9 2.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase BCLP PF12304.8 AID29377.1 - 2.3 7.7 7.3 3.4 7.2 0.6 2.4 2 1 0 2 2 2 0 Beta-casein like protein DUF2070 PF09843.9 AID29377.1 - 9.1 4.4 10.5 11 4.1 10.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MarR_2 PF12802.7 AID29378.1 - 2.9e-14 52.7 0.8 5.8e-14 51.7 0.8 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID29378.1 - 9.8e-14 51.0 0.1 2.3e-13 49.8 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID29378.1 - 9.5e-08 32.4 0.1 1.6e-07 31.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 AID29378.1 - 5.2e-05 22.7 0.0 9.5e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID29378.1 - 0.00033 20.6 1.8 0.00051 20.0 0.2 2.1 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 AID29378.1 - 0.00088 19.4 0.0 0.0026 17.9 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_28 PF13518.6 AID29378.1 - 0.0019 18.3 0.1 0.0043 17.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain SMC_ScpB PF04079.16 AID29378.1 - 0.0029 17.2 0.1 0.0063 16.1 0.0 1.5 1 1 1 2 2 2 1 Segregation and condensation complex subunit ScpB TrmB PF01978.19 AID29378.1 - 0.0047 16.8 0.0 0.0082 16.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 AID29378.1 - 0.0096 15.9 0.3 0.019 15.0 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn helix B-block_TFIIIC PF04182.12 AID29378.1 - 0.019 15.1 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_1 PF00126.27 AID29378.1 - 0.02 14.8 0.1 0.055 13.4 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 AID29378.1 - 0.061 13.1 0.2 0.14 11.9 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_23 PF13384.6 AID29378.1 - 0.15 11.9 1.9 0.36 10.7 0.3 2.4 3 0 0 3 3 3 0 Homeodomain-like domain HlyD_3 PF13437.6 AID29379.1 - 1.3e-20 74.1 2.5 8e-16 58.7 0.1 2.8 2 2 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID29379.1 - 1.4e-16 60.4 8.4 5.7e-14 51.8 0.0 3.3 3 1 0 3 3 3 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID29379.1 - 4.6e-16 58.4 1.0 4.6e-16 58.4 1.0 3.7 4 0 0 4 4 4 1 Biotin-lipoyl like HlyD PF00529.20 AID29379.1 - 9.4e-08 31.8 12.0 1.8e-07 30.9 12.0 1.7 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 AID29379.1 - 3.8e-05 23.4 2.4 0.029 14.2 0.1 3.4 4 0 0 4 4 4 2 Biotin-requiring enzyme OEP PF02321.18 AID29379.1 - 0.0023 17.8 16.8 0.0023 17.8 16.8 2.0 3 0 0 3 3 3 1 Outer membrane efflux protein MFS_1 PF07690.16 AID29381.1 - 3.9e-58 197.1 47.7 3.9e-58 197.1 47.7 1.7 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID29381.1 - 8.3e-11 41.4 25.1 1.3e-10 40.7 9.3 2.5 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 AID29381.1 - 5e-05 22.0 6.2 5e-05 22.0 6.2 4.0 2 2 2 4 4 4 1 MFS/sugar transport protein MFS_3 PF05977.13 AID29381.1 - 0.00093 17.7 10.2 0.00093 17.7 10.2 3.5 2 2 2 4 4 4 3 Transmembrane secretion effector OATP PF03137.20 AID29381.1 - 0.0019 16.6 0.1 0.0019 16.6 0.1 3.2 2 1 1 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family CAP PF00188.26 AID29383.1 - 9.3e-19 68.5 0.0 1e-18 68.4 0.0 1.0 1 0 0 1 1 1 1 Cysteine-rich secretory protein family NolV PF06635.12 AID29383.1 - 0.061 12.7 0.1 0.069 12.5 0.1 1.1 1 0 0 1 1 1 0 Nodulation protein NolV Tad PF13400.6 AID29384.1 - 4.5e-08 33.3 6.5 1.1e-07 32.1 6.5 1.7 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like DUF680 PF05079.12 AID29385.1 - 8.1 7.2 8.3 12 6.7 8.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF680) DUF2189 PF09955.9 AID29386.1 - 5.8e-41 139.7 6.4 5.8e-41 139.7 6.4 2.9 2 1 0 3 3 3 1 Predicted integral membrane protein (DUF2189) DUF350 PF03994.14 AID29386.1 - 6.2 7.1 17.4 1.9 8.7 9.9 3.1 2 1 0 2 2 2 0 Domain of Unknown Function (DUF350) LysE PF01810.18 AID29387.1 - 7.1e-30 103.9 11.7 8.3e-30 103.7 11.7 1.1 1 0 0 1 1 1 1 LysE type translocator VWA PF00092.28 AID29388.1 - 1.1e-08 35.5 0.3 0.042 14.1 0.0 3.9 4 0 0 4 4 4 2 von Willebrand factor type A domain VWA_2 PF13519.6 AID29388.1 - 6.4e-08 33.2 2.6 0.0031 18.1 0.1 3.5 4 0 0 4 4 4 2 von Willebrand factor type A domain Tad PF13400.6 AID29388.1 - 3.1e-07 30.6 0.5 7.6e-07 29.3 0.5 1.7 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like VWA_2 PF13519.6 AID29389.1 - 3.8e-08 33.9 5.2 0.0015 19.2 0.1 3.8 4 0 0 4 4 4 2 von Willebrand factor type A domain VWA PF00092.28 AID29389.1 - 6.3e-08 33.1 0.5 0.034 14.4 0.1 3.3 3 0 0 3 3 3 2 von Willebrand factor type A domain Tad PF13400.6 AID29389.1 - 3.4e-06 27.3 2.5 9.1e-06 25.9 2.5 1.8 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like Hydrolase_6 PF13344.6 AID29390.1 - 4.5e-18 65.2 0.0 5.8e-17 61.7 0.0 2.5 3 0 0 3 3 3 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID29390.1 - 8.3e-10 38.6 0.5 4.3e-09 36.3 0.2 2.2 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 AID29390.1 - 2e-08 34.8 0.1 0.0026 18.1 0.0 2.5 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID29390.1 - 0.00087 19.7 0.5 0.032 14.6 0.1 2.6 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Peripla_BP_4 PF13407.6 AID29390.1 - 0.14 11.7 0.1 1.8 8.1 0.1 2.2 2 0 0 2 2 2 0 Periplasmic binding protein domain FAD_syn PF06574.12 AID29391.1 - 1.1e-48 165.1 0.0 1.5e-48 164.7 0.0 1.2 1 0 0 1 1 1 1 FAD synthetase Flavokinase PF01687.17 AID29391.1 - 2.8e-33 114.5 0.0 4.5e-33 113.9 0.0 1.3 1 0 0 1 1 1 1 Riboflavin kinase CTP_transf_like PF01467.26 AID29391.1 - 0.014 15.6 0.0 0.043 14.0 0.0 1.7 2 0 0 2 2 2 0 Cytidylyltransferase-like DUF308 PF03729.13 AID29392.1 - 1.8e-20 73.0 40.4 1.4e-13 51.0 19.5 3.2 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) Phosphoesterase PF04185.14 AID29393.1 - 3.1e-121 404.9 0.6 3.6e-121 404.7 0.6 1.0 1 0 0 1 1 1 1 Phosphoesterase family Sulfatase PF00884.23 AID29393.1 - 5.4e-05 22.7 0.3 0.00012 21.6 0.2 1.6 2 0 0 2 2 2 1 Sulfatase MipA PF06629.12 AID29395.1 - 9e-41 140.5 2.2 1.1e-40 140.2 2.2 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA tRNA-synt_1 PF00133.22 AID29396.1 - 7.8e-173 576.0 0.0 9.4e-173 575.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 AID29396.1 - 3.3e-23 82.3 0.0 5.9e-23 81.5 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 AID29396.1 - 7.3e-19 67.8 0.1 1.8e-10 40.1 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 AID29396.1 - 1.1e-09 38.1 0.0 0.00014 21.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AID29396.1 - 4.6e-06 25.8 0.0 0.00048 19.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) STI1 PF17830.1 AID29397.1 - 0.00069 19.5 0.4 0.045 13.7 0.2 2.2 2 0 0 2 2 2 2 STI1 domain MafB19-deam PF14437.6 AID29398.1 - 1.6e-27 95.9 0.0 1.8e-27 95.8 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 AID29398.1 - 1e-21 76.7 0.0 1.2e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region SNAD4 PF18750.1 AID29398.1 - 0.0011 19.0 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 Bd3614-deam PF14439.6 AID29398.1 - 0.0019 18.3 1.2 0.0044 17.1 1.1 1.9 1 1 0 1 1 1 1 Bd3614-like deaminase APOBEC2 PF18772.1 AID29398.1 - 0.0089 16.1 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 1 APOBEC2 APOBEC_N PF08210.11 AID29398.1 - 0.028 14.3 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain NAD2 PF18782.1 AID29398.1 - 0.051 13.7 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 NAD1 PF18778.1 AID29398.1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 S4 PF01479.25 AID29399.1 - 6.7e-13 48.1 0.0 1.4e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 S4 domain PseudoU_synth_2 PF00849.22 AID29399.1 - 4.2e-09 36.7 0.0 1.5e-08 34.9 0.0 1.9 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4_2 PF13275.6 AID29399.1 - 0.078 12.8 0.0 0.2 11.5 0.0 1.6 2 0 0 2 2 2 0 S4 domain EccE PF11203.8 AID29399.1 - 0.12 12.7 0.1 0.24 11.7 0.1 1.4 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Cons_hypoth95 PF03602.15 AID29400.1 - 2.6e-53 180.4 0.0 2.9e-53 180.2 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 UPF0020 PF01170.18 AID29400.1 - 0.00016 21.4 0.0 0.06 13.0 0.0 2.1 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 MTS PF05175.14 AID29400.1 - 0.0027 17.3 0.0 0.0034 16.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain MethyltransfD12 PF02086.15 AID29400.1 - 0.0072 16.0 0.1 0.094 12.4 0.0 2.0 2 0 0 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_16 PF10294.9 AID29400.1 - 0.094 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Lysine methyltransferase DUF938 PF06080.12 AID29400.1 - 0.25 11.1 0.0 0.34 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Peptidase_M16_C PF05193.21 AID29401.1 - 1.9e-34 119.3 0.0 2.9e-34 118.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 AID29401.1 - 6.3e-29 100.9 0.0 1.4e-28 99.8 0.0 1.5 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 AID29402.1 - 7.8e-33 114.0 0.0 1.2e-32 113.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 AID29402.1 - 1e-06 28.8 0.0 2.1e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Patatin PF01734.22 AID29403.1 - 8.1e-26 91.5 2.2 1.7e-25 90.4 2.2 1.5 1 1 0 1 1 1 1 Patatin-like phospholipase RibD_C PF01872.17 AID29404.1 - 4.3e-28 98.5 0.0 5.2e-28 98.3 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain tRNA-synt_2 PF00152.20 AID29405.1 - 9.2e-35 120.2 0.0 1.2e-34 119.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 AID29405.1 - 0.00015 21.3 0.0 0.032 13.7 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) EFP PF01132.20 AID29406.1 - 3.8e-22 78.1 0.0 1.6e-21 76.1 0.0 2.1 2 0 0 2 2 2 1 Elongation factor P (EF-P) OB domain Elong-fact-P_C PF09285.11 AID29406.1 - 1.4e-19 69.6 0.6 6e-19 67.5 0.4 2.1 2 0 0 2 2 2 1 Elongation factor P, C-terminal EFP_N PF08207.12 AID29406.1 - 2.3e-15 56.3 0.1 5.8e-15 55.1 0.1 1.7 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain Glyoxalase PF00903.25 AID29407.1 - 7.3e-05 23.0 0.0 0.001 19.3 0.0 2.1 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID29407.1 - 0.04 13.8 0.0 0.1 12.6 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID29407.1 - 0.072 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29407.1 - 0.075 13.8 0.1 0.72 10.7 0.1 2.2 1 1 0 1 1 1 0 Glyoxalase-like domain PmbA_TldD PF01523.16 AID29408.1 - 1.4e-55 189.1 3.6 1.4e-55 189.1 3.6 1.5 2 0 0 2 2 2 1 Putative modulator of DNA gyrase Ribosomal_S3_C PF00189.20 AID29408.1 - 0.47 11.0 2.4 0.63 10.6 0.2 2.1 2 0 0 2 2 2 0 Ribosomal protein S3, C-terminal domain Inositol_P PF00459.25 AID29409.1 - 1.3e-46 159.4 0.0 1.6e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DUF4170 PF13773.6 AID29410.1 - 8.6e-39 131.5 0.1 9.9e-39 131.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4170) AhpC-TSA PF00578.21 AID29410.1 - 0.063 13.2 0.0 0.07 13.0 0.0 1.1 1 0 0 1 1 1 0 AhpC/TSA family DUF374 PF04028.13 AID29411.1 - 5.3e-24 83.6 0.3 3.5e-23 80.9 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF374) Glycos_transf_N PF04413.16 AID29412.1 - 5.5e-58 195.5 0.0 9.8e-58 194.7 0.0 1.4 1 0 0 1 1 1 1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Glyco_trans_1_2 PF13524.6 AID29412.1 - 0.061 13.7 0.0 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 Glycosyl transferases group 1 LpxK PF02606.14 AID29413.1 - 2.3e-84 283.3 0.1 2.9e-84 283.0 0.1 1.0 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase DUF2093 PF09866.9 AID29414.1 - 7.9e-24 82.8 0.0 1e-23 82.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2093) LolB PF03550.14 AID29414.1 - 0.094 12.8 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Outer membrane lipoprotein LolB LysR_substrate PF03466.20 AID29416.1 - 1.4e-23 83.3 3.4 2e-23 82.9 3.4 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29416.1 - 5.1e-21 74.4 0.3 1.3e-20 73.1 0.3 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID29416.1 - 0.013 15.4 2.1 0.13 12.2 0.0 3.2 3 0 0 3 3 3 0 MarR family HTH_11 PF08279.12 AID29416.1 - 0.018 15.0 0.0 0.071 13.1 0.0 2.0 3 0 0 3 3 3 0 HTH domain HTH_24 PF13412.6 AID29416.1 - 0.034 13.7 0.1 0.22 11.1 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 AID29416.1 - 0.065 13.4 0.2 0.37 10.9 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.6 AID29416.1 - 0.091 12.6 0.0 0.35 10.7 0.0 2.0 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain EamA PF00892.20 AID29417.1 - 6.4e-40 136.5 40.8 7.6e-22 78.0 15.3 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 AID29417.1 - 8.3e-06 25.4 4.6 1.8e-05 24.2 4.6 1.6 1 1 0 1 1 1 1 Triose-phosphate Transporter family DUF1905 PF08922.11 AID29418.1 - 1.2e-24 86.2 0.0 1.3e-24 86.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1905) MutL_C PF08676.11 AID29419.1 - 8.4e-50 168.4 0.2 1.5e-49 167.6 0.2 1.4 1 0 0 1 1 1 1 MutL C terminal dimerisation domain DNA_mis_repair PF01119.19 AID29419.1 - 4.2e-33 113.5 0.0 9.3e-33 112.4 0.0 1.6 2 0 0 2 2 2 1 DNA mismatch repair protein, C-terminal domain HATPase_c_3 PF13589.6 AID29419.1 - 1e-08 35.1 0.0 3.4e-08 33.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 AID29419.1 - 7.1e-06 26.5 0.0 2.4e-05 24.8 0.0 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LysR_substrate PF03466.20 AID29420.1 - 1.7e-42 145.2 0.3 2.4e-42 144.7 0.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID29420.1 - 9.8e-19 67.1 2.1 3.5e-18 65.3 2.1 2.0 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID29420.1 - 0.0059 16.5 0.3 0.036 14.0 0.1 2.4 3 0 0 3 3 3 1 MarR family MTTB PF06253.11 AID29421.1 - 1.3e-213 709.6 0.1 1.6e-213 709.3 0.1 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) SBP_bac_5 PF00496.22 AID29422.1 - 3.1e-70 237.0 3.6 4.2e-70 236.6 3.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF3828 PF12883.7 AID29423.1 - 1.3e-07 32.0 0.3 1.6e-07 31.7 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3828) ATP-grasp_2 PF08442.10 AID29423.1 - 0.034 13.7 0.0 0.047 13.2 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain DUF3612 PF12268.8 AID29423.1 - 0.066 13.3 0.0 0.082 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3612) Glycos_transf_2 PF00535.26 AID29425.1 - 3.2e-07 30.3 0.0 5.6e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Methyltransf_24 PF13578.6 AID29425.1 - 8.3e-07 30.0 1.3 1e-05 26.5 0.9 2.9 2 2 0 2 2 2 1 Methyltransferase domain Glyco_tranf_2_2 PF10111.9 AID29425.1 - 0.00025 20.6 0.0 0.014 14.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 DUF3828 PF12883.7 AID29426.1 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3828) MlaC PF05494.12 AID29426.1 - 0.0082 15.9 0.1 0.013 15.3 0.1 1.3 2 0 0 2 2 2 1 MlaC protein QueF PF14489.6 AID29427.1 - 1.4e-31 108.5 0.0 1.8e-31 108.1 0.0 1.2 1 0 0 1 1 1 1 QueF-like protein QueF_N PF14819.6 AID29427.1 - 0.0029 17.9 0.0 0.0042 17.4 0.0 1.2 1 0 0 1 1 1 1 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Oxidored_FMN PF00724.20 AID29428.1 - 6.4e-56 190.1 0.0 8.1e-56 189.7 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.14 AID29428.1 - 1.1e-14 54.4 8.0 2.8e-10 39.9 0.8 2.5 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID29428.1 - 9.7e-09 35.7 1.9 5.2e-05 23.7 1.4 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID29428.1 - 4.9e-07 29.9 3.0 7.7e-07 29.2 0.7 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID29428.1 - 1.7e-06 27.0 1.2 1e-05 24.4 1.4 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 AID29428.1 - 9.9e-06 24.9 5.7 4e-05 22.9 5.7 1.9 2 0 0 2 2 2 1 FAD binding domain Amino_oxidase PF01593.24 AID29428.1 - 1.1e-05 24.9 0.9 0.028 13.7 0.7 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 AID29428.1 - 4.4e-05 23.0 2.5 4.4e-05 23.0 2.5 2.2 2 1 1 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.22 AID29428.1 - 8.7e-05 21.8 1.9 0.00096 18.3 0.8 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID29428.1 - 8.8e-05 21.9 0.8 0.00019 20.8 0.8 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 AID29428.1 - 0.00014 21.2 2.2 0.00023 20.5 1.3 1.7 1 1 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 AID29428.1 - 0.00045 19.6 0.6 0.0014 17.9 0.3 1.8 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 AID29428.1 - 0.0011 18.6 9.7 0.015 14.9 9.7 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase Phage_Coat_B PF05356.11 AID29428.1 - 0.0011 18.8 0.1 0.0025 17.7 0.1 1.5 1 0 0 1 1 1 1 Phage Coat protein B 3HCDH_N PF02737.18 AID29428.1 - 0.0089 15.9 1.6 0.019 14.9 0.6 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GHL6 PF14871.6 AID29428.1 - 0.012 15.7 0.0 0.099 12.8 0.0 2.2 2 0 0 2 2 2 0 Hypothetical glycosyl hydrolase 6 Pyr_redox_3 PF13738.6 AID29428.1 - 0.014 14.7 0.0 0.03 13.6 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AID29428.1 - 0.076 13.5 0.2 0.48 10.9 0.2 2.2 2 0 0 2 2 2 0 Putative NAD(P)-binding XdhC_C PF13478.6 AID29428.1 - 0.11 13.0 0.2 2.2 8.8 0.0 2.6 3 0 0 3 3 2 0 XdhC Rossmann domain DUF364 PF04016.12 AID29428.1 - 0.13 11.8 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Putative heavy-metal chelation GFO_IDH_MocA PF01408.22 AID29428.1 - 0.14 13.0 0.1 0.88 10.4 0.1 2.4 2 1 0 2 2 1 0 Oxidoreductase family, NAD-binding Rossmann fold NnrU PF07298.11 AID29429.1 - 0.022 14.3 8.9 0.026 14.0 8.9 1.3 1 1 0 1 1 1 0 NnrU protein MarR PF01047.22 AID29430.1 - 2.6e-10 40.1 0.1 4.2e-10 39.4 0.1 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID29430.1 - 9.6e-07 28.6 0.8 3.6e-06 26.8 0.2 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID29430.1 - 9.2e-06 26.1 0.1 1.4e-05 25.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 AID29430.1 - 5.2e-05 23.1 0.2 0.00011 22.1 0.2 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID29430.1 - 0.00029 20.3 0.2 0.00067 19.2 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 AID29430.1 - 0.00083 19.5 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID29430.1 - 0.0025 17.8 0.5 0.0082 16.2 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 AID29430.1 - 0.0052 16.6 0.2 0.012 15.5 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 AID29430.1 - 0.0053 16.6 0.0 0.0075 16.1 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 AID29430.1 - 0.026 14.5 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Fe_dep_repress PF01325.19 AID29430.1 - 0.046 13.9 0.0 0.073 13.3 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 AID29430.1 - 0.058 13.0 0.2 0.2 11.3 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family B-block_TFIIIC PF04182.12 AID29430.1 - 0.2 11.9 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Polysacc_deac_1 PF01522.21 AID29431.1 - 1.2e-21 76.9 0.1 3e-21 75.6 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide deacetylase EAL PF00563.20 AID29432.1 - 2.8e-64 216.9 0.0 5e-64 216.1 0.0 1.4 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID29432.1 - 8.7e-45 152.4 0.1 1.5e-44 151.6 0.1 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PilJ PF13675.6 AID29432.1 - 0.0016 18.5 0.5 0.0037 17.3 0.5 1.7 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term Aminotran_1_2 PF00155.21 AID29433.1 - 4.3e-66 223.6 0.0 4.9e-66 223.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 AID29433.1 - 0.013 14.5 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V ADH_N PF08240.12 AID29434.1 - 3e-32 110.8 3.0 3e-32 110.7 1.6 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID29434.1 - 9.5e-24 83.8 0.2 1.8e-23 83.0 0.2 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID29434.1 - 5.7e-10 39.0 0.1 8.7e-10 38.4 0.1 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 AID29434.1 - 0.0066 17.5 0.1 0.027 15.5 0.0 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 AID29434.1 - 0.027 13.8 0.5 0.051 12.9 0.5 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 AID29434.1 - 0.11 11.2 0.6 0.15 10.7 0.6 1.2 1 0 0 1 1 1 0 HI0933-like protein FMN_dh PF01070.18 AID29434.1 - 0.12 11.4 0.2 0.17 10.9 0.2 1.1 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Methyltransf_16 PF10294.9 AID29434.1 - 0.14 11.9 0.1 0.22 11.3 0.1 1.2 1 0 0 1 1 1 0 Lysine methyltransferase MarR PF01047.22 AID29435.1 - 1.2e-13 50.8 0.3 2.6e-13 49.7 0.3 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID29435.1 - 6e-11 42.1 0.6 6e-11 42.1 0.6 1.9 3 0 0 3 3 3 1 MarR family HTH_27 PF13463.6 AID29435.1 - 3.6e-10 40.2 1.5 4.4e-10 39.9 0.7 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID29435.1 - 9.3e-06 25.4 0.8 9.3e-06 25.4 0.8 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 AID29435.1 - 6.6e-05 22.7 0.0 0.00014 21.7 0.0 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 AID29435.1 - 0.036 14.0 0.0 0.067 13.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID29435.1 - 0.053 13.5 2.3 0.058 13.4 0.7 2.1 2 1 1 3 3 3 0 Crp-like helix-turn-helix domain TIP39 PF14980.6 AID29435.1 - 0.072 13.0 4.1 2.2 8.2 0.4 2.6 2 0 0 2 2 2 0 TIP39 peptide HTH_34 PF13601.6 AID29435.1 - 0.074 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HgmA PF04209.13 AID29436.1 - 2.2e-217 721.8 0.0 2.5e-217 721.7 0.0 1.0 1 0 0 1 1 1 1 homogentisate 1,2-dioxygenase Lactamase_B_2 PF12706.7 AID29437.1 - 9.2e-21 74.3 0.8 1.2e-20 73.9 0.8 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AID29437.1 - 2.5e-14 53.7 4.4 5.4e-14 52.7 4.4 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 AID29437.1 - 0.0024 17.8 0.0 0.0034 17.3 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain FAA_hydrolase PF01557.18 AID29438.1 - 4e-42 144.4 0.0 5.4e-42 143.9 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FAA_hydro_N_2 PF18288.1 AID29438.1 - 5.4e-26 90.8 0.1 8.6e-26 90.2 0.1 1.3 1 0 0 1 1 1 1 Fumarylacetoacetase N-terminal domain 2 TMEM132D_C PF15706.5 AID29439.1 - 0.085 12.6 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DinB PF05163.12 AID29440.1 - 1.4e-46 158.5 0.0 1.6e-46 158.3 0.0 1.0 1 0 0 1 1 1 1 DinB family DinB_2 PF12867.7 AID29440.1 - 5.3e-10 39.9 0.4 7.4e-10 39.4 0.4 1.2 1 0 0 1 1 1 1 DinB superfamily Glyoxalase_5 PF14696.6 AID29441.1 - 2.8e-54 183.1 0.1 7e-54 181.8 0.1 1.7 2 0 0 2 2 2 1 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Glyoxalase PF00903.25 AID29441.1 - 8.7e-19 68.0 0.5 3.3e-18 66.1 0.1 2.0 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID29441.1 - 9.9e-09 35.4 0.1 2.6e-05 24.4 0.0 2.8 3 0 0 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID29441.1 - 0.08 13.1 0.0 15 5.7 0.0 3.2 3 0 0 3 3 3 0 Glyoxalase-like domain AsnC_trans_reg PF01037.21 AID29442.1 - 3.7e-22 78.1 0.1 5.6e-22 77.5 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID29442.1 - 5.8e-18 64.2 0.2 1e-17 63.4 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID29442.1 - 8.6e-15 54.3 1.4 1.4e-14 53.6 1.4 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 AID29442.1 - 3e-05 23.9 0.1 5.4e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID29442.1 - 0.00049 19.9 0.3 0.0015 18.3 0.1 1.8 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 AID29442.1 - 0.0012 18.9 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID29442.1 - 0.0023 17.9 0.0 0.0046 17.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID29442.1 - 0.0054 16.5 0.4 0.017 14.9 0.0 2.0 3 0 0 3 3 3 1 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 AID29442.1 - 0.0058 16.8 0.0 0.012 15.8 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 AID29442.1 - 0.013 15.4 0.0 0.037 13.9 0.0 1.7 2 0 0 2 2 2 0 MarR family Rrf2 PF02082.20 AID29442.1 - 0.064 13.6 0.0 0.16 12.4 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_28 PF13518.6 AID29442.1 - 0.072 13.2 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_9 PF08221.11 AID29442.1 - 0.11 12.6 0.2 4.3 7.5 0.0 3.2 4 0 0 4 4 4 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_36 PF13730.6 AID29442.1 - 0.18 11.8 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF442 PF04273.13 AID29443.1 - 1.2e-50 170.1 0.2 1.4e-50 170.0 0.2 1.0 1 0 0 1 1 1 1 Putative phosphatase (DUF442) ZnuA PF01297.17 AID29444.1 - 6.2e-82 274.8 0.1 7.1e-82 274.7 0.1 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic HEM4 PF02602.15 AID29444.1 - 0.017 14.5 0.0 0.53 9.6 0.0 2.3 1 1 1 2 2 2 0 Uroporphyrinogen-III synthase HemD DUF1652 PF07865.11 AID29444.1 - 0.069 13.0 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) ABC-3 PF00950.17 AID29445.1 - 3.1e-51 174.4 27.9 3.5e-51 174.2 27.9 1.0 1 0 0 1 1 1 1 ABC 3 transport family Alpha_GJ PF03229.13 AID29445.1 - 0.073 13.6 0.7 0.073 13.6 0.7 2.2 2 0 0 2 2 2 0 Alphavirus glycoprotein J VMA21 PF09446.10 AID29445.1 - 0.3 11.2 9.2 0.13 12.4 3.0 3.1 2 1 0 2 2 2 0 VMA21-like domain ABC_tran PF00005.27 AID29446.1 - 4.7e-23 82.2 0.0 6.6e-23 81.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29446.1 - 1e-07 32.1 1.7 0.00028 20.8 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29446.1 - 2.4e-06 27.2 0.1 0.0016 17.9 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID29446.1 - 5.8e-05 22.8 0.3 0.00012 21.8 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID29446.1 - 0.0017 18.9 0.0 0.0023 18.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 AID29446.1 - 0.0027 17.9 0.1 0.028 14.6 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 AID29446.1 - 0.0032 17.2 1.4 0.0063 16.2 0.7 1.9 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID29446.1 - 0.0058 16.2 0.1 0.014 14.9 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID29446.1 - 0.0084 16.3 0.1 0.022 14.9 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID29446.1 - 0.011 15.5 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 AID29446.1 - 0.012 15.5 0.0 0.028 14.3 0.0 1.7 2 0 0 2 2 2 0 NACHT domain MMR_HSR1 PF01926.23 AID29446.1 - 0.02 15.0 0.0 0.03 14.4 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID29446.1 - 0.024 14.6 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase MukB PF04310.12 AID29446.1 - 0.047 13.5 0.4 0.076 12.8 0.4 1.2 1 0 0 1 1 1 0 MukB N-terminal AAA_22 PF13401.6 AID29446.1 - 0.087 13.1 0.2 0.24 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID29446.1 - 0.13 11.1 0.6 0.23 10.2 0.6 1.3 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_27 PF13514.6 AID29446.1 - 0.19 11.3 0.0 0.3 10.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 AID29446.1 - 0.34 11.2 1.2 1.3 9.4 1.2 1.9 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 AID29446.1 - 0.87 9.6 1.8 2.8 8.0 1.4 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain Ribonuc_L-PSP PF01042.21 AID29447.1 - 2.1e-22 79.4 0.0 2.4e-22 79.2 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF494 PF04361.13 AID29447.1 - 0.18 11.7 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF494) UTRA PF07702.13 AID29448.1 - 1.1e-28 99.8 0.1 1.6e-28 99.3 0.1 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 AID29448.1 - 4.4e-18 64.7 0.0 8e-18 63.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 AID29448.1 - 9e-05 22.3 0.0 0.00027 20.8 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID29448.1 - 0.00059 19.8 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 AID29448.1 - 0.0023 17.8 0.0 0.0041 17.0 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.6 AID29448.1 - 0.0042 16.7 0.0 0.0079 15.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 AID29448.1 - 0.02 14.8 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.7 AID29448.1 - 0.022 14.8 0.0 0.096 12.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 AID29448.1 - 0.045 14.1 0.0 0.083 13.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_36 PF13730.6 AID29448.1 - 0.048 13.6 0.0 0.081 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 AID29448.1 - 0.058 13.3 0.1 0.25 11.2 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_27 PF13463.6 AID29448.1 - 0.12 12.8 0.2 1.3 9.6 0.0 2.5 3 0 0 3 3 3 0 Winged helix DNA-binding domain HTH_DeoR PF08220.12 AID29448.1 - 0.13 12.1 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Amidohydro_1 PF01979.20 AID29449.1 - 8.4e-31 107.5 0.1 1.1e-30 107.2 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID29450.1 - 7e-23 81.8 4.6 2.7e-16 60.1 3.5 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 AID29450.1 - 2.9e-20 72.9 2.8 5.6e-19 68.7 2.8 2.3 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 AID29450.1 - 0.0074 15.6 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase Methyltransf_25 PF13649.6 AID29450.1 - 0.012 16.3 0.1 5.4 7.8 0.0 2.5 1 1 1 2 2 2 0 Methyltransferase domain Amidohydro_2 PF04909.14 AID29450.1 - 0.045 13.5 0.1 0.36 10.6 0.1 2.2 1 1 0 1 1 1 0 Amidohydrolase Lyase_aromatic PF00221.19 AID29451.1 - 3.3e-182 606.3 6.5 3.9e-182 606.1 6.5 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase COE1_HLH PF16423.5 AID29451.1 - 0.08 12.7 0.0 0.24 11.2 0.0 1.8 2 0 0 2 2 2 0 Transcription factor COE1 helix-loop-helix domain FGase PF05013.12 AID29452.1 - 7.9e-61 206.0 0.0 9.1e-61 205.8 0.0 1.0 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase 2-oxoacid_dh PF00198.23 AID29452.1 - 0.23 10.9 0.0 0.34 10.3 0.0 1.1 1 0 0 1 1 1 0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Urocanase_C PF17392.2 AID29454.1 - 1.8e-92 308.2 0.2 3.1e-92 307.4 0.2 1.4 1 0 0 1 1 1 1 Urocanase C-terminal domain Urocanase PF01175.18 AID29454.1 - 3.2e-86 288.3 0.0 4.4e-86 287.9 0.0 1.2 1 0 0 1 1 1 1 Urocanase Rossmann-like domain Urocanase_N PF17391.2 AID29454.1 - 9.7e-60 199.8 0.0 1.9e-59 198.9 0.0 1.5 1 0 0 1 1 1 1 Urocanase N-terminal domain HutD PF05962.11 AID29455.1 - 2.2e-54 184.2 0.0 2.6e-54 184.0 0.0 1.0 1 0 0 1 1 1 1 HutD Glyco_transf_36 PF06165.11 AID29456.1 - 2.2e-126 420.4 0.0 2.6e-62 210.5 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase family 36 Glyco_hydro_36 PF17167.4 AID29456.1 - 1e-112 377.0 0.0 1.5e-112 376.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase 36 superfamily, catalytic domain Glycoamylase PF10091.9 AID29456.1 - 1.3e-12 47.8 0.0 2.6e-12 46.8 0.0 1.5 1 0 0 1 1 1 1 Putative glucoamylase DUF3131 PF11329.8 AID29456.1 - 0.0013 17.8 0.0 0.0023 17.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3131) ABC_tran PF00005.27 AID29457.1 - 1.5e-34 119.5 0.0 2.5e-34 118.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID29457.1 - 1.5e-34 119.9 7.4 1.9e-34 119.5 7.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID29457.1 - 1.4e-10 41.0 0.1 6.2e-10 38.9 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID29457.1 - 1.4e-05 25.0 0.0 4e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID29457.1 - 3.4e-05 24.3 0.4 0.00013 22.5 0.4 2.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID29457.1 - 0.00015 22.3 0.1 0.00033 21.2 0.0 1.6 2 0 0 2 2 1 1 AAA domain DEAD PF00270.29 AID29457.1 - 0.00015 21.5 0.2 0.00049 19.9 0.2 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_29 PF13555.6 AID29457.1 - 0.0002 21.0 0.0 0.00064 19.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID29457.1 - 0.00091 19.5 0.9 0.011 15.9 0.9 2.4 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AID29457.1 - 0.00092 19.3 0.9 0.0032 17.6 0.3 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_21 PF13304.6 AID29457.1 - 0.0012 18.7 0.6 0.04 13.7 0.1 2.5 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system NTPase_1 PF03266.15 AID29457.1 - 0.0028 17.6 0.0 0.0089 15.9 0.0 1.9 1 1 0 1 1 1 1 NTPase AAA_28 PF13521.6 AID29457.1 - 0.0067 16.7 0.7 0.028 14.7 0.2 2.3 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 AID29457.1 - 0.0077 15.3 0.0 0.016 14.3 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein SRP54 PF00448.22 AID29457.1 - 0.011 15.4 0.3 0.073 12.7 0.3 2.2 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain Zeta_toxin PF06414.12 AID29457.1 - 0.011 15.0 0.0 0.026 13.8 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 AID29457.1 - 0.02 14.6 3.9 0.031 14.0 2.1 2.2 2 1 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 AID29457.1 - 0.03 14.0 0.0 0.054 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.6 AID29457.1 - 0.052 14.1 0.0 0.13 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 AID29457.1 - 0.053 13.6 0.1 0.18 11.9 0.1 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 AID29457.1 - 0.059 13.1 1.8 0.86 9.3 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA PF00004.29 AID29457.1 - 0.065 13.7 0.1 1.7 9.1 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2206 PF09971.9 AID29457.1 - 0.067 11.9 0.3 0.1 11.4 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) cobW PF02492.19 AID29457.1 - 0.074 12.6 0.7 0.22 11.1 0.7 1.9 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 AID29457.1 - 0.085 12.4 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_15 PF13175.6 AID29457.1 - 0.11 12.1 0.0 0.22 11.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 AID29457.1 - 0.12 12.1 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID29457.1 - 0.14 12.5 1.5 2.1 8.6 1.5 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_5 PF07728.14 AID29457.1 - 0.15 12.0 0.3 3 7.8 0.0 2.9 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 AID29457.1 - 0.15 12.0 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Cytochrom_C_asm PF01578.20 AID29458.1 - 2.3e-32 112.5 19.9 2.3e-32 112.5 19.9 1.4 2 0 0 2 2 2 1 Cytochrome C assembly protein NiFe_hyd_3_EhaA PF17367.2 AID29458.1 - 0.49 10.6 0.0 0.49 10.6 0.0 3.1 2 1 1 3 3 3 0 NiFe-hydrogenase-type-3 Eha complex subunit A Anoctamin PF04547.12 AID29458.1 - 2.1 7.1 6.5 4.4 6.0 5.7 1.8 1 1 1 2 2 2 0 Calcium-activated chloride channel Ala_racemase_N PF01168.20 AID29459.1 - 4.3e-32 111.5 0.2 5.6e-32 111.2 0.2 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain D-ser_dehydrat PF14031.6 AID29459.1 - 1.4e-24 86.6 0.1 3.2e-24 85.4 0.1 1.6 1 0 0 1 1 1 1 Putative serine dehydratase domain Lyx_isomer PF07385.12 AID29460.1 - 2.4e-95 318.1 0.0 2.7e-95 317.9 0.0 1.0 1 0 0 1 1 1 1 D-lyxose isomerase Cupin_2 PF07883.11 AID29460.1 - 0.056 13.2 0.0 0.19 11.5 0.0 1.8 2 0 0 2 2 2 0 Cupin domain FixS PF03597.15 AID29460.1 - 0.11 12.2 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type RDD PF06271.12 AID29461.1 - 1.3e-16 61.0 11.2 1.7e-16 60.7 11.2 1.1 1 0 0 1 1 1 1 RDD family SpoIIM PF01944.17 AID29462.1 - 6.7e-28 97.7 12.6 1.2e-27 96.8 12.6 1.3 1 0 0 1 1 1 1 Stage II sporulation protein M DUF58 PF01882.18 AID29463.1 - 3.7e-18 65.6 0.0 1.5e-17 63.7 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_2 PF13519.6 AID29463.1 - 0.00037 21.1 0.0 0.0007 20.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_3 PF07726.11 AID29464.1 - 5.5e-62 207.4 0.0 9.5e-62 206.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 AID29464.1 - 1.4e-20 72.9 4.7 5.4e-20 71.0 4.7 2.1 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 AID29464.1 - 1.8e-13 50.7 0.0 3.5e-13 49.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AID29464.1 - 2.6e-07 30.5 0.0 1.3e-06 28.2 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 AID29464.1 - 6.2e-06 25.7 0.2 0.0007 19.0 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 AID29464.1 - 1.5e-05 25.4 0.0 3.6e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 AID29464.1 - 0.00017 21.3 0.0 0.0013 18.5 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 AID29464.1 - 0.013 14.6 0.0 0.043 12.9 0.0 1.8 1 1 0 1 1 1 0 MCM P-loop domain AAA_16 PF13191.6 AID29464.1 - 0.017 15.5 0.1 0.046 14.1 0.0 1.9 2 1 0 2 2 2 0 AAA ATPase domain AAA_6 PF12774.7 AID29464.1 - 0.041 12.9 0.0 8.2 5.3 0.0 2.2 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region AAA_22 PF13401.6 AID29464.1 - 0.044 14.1 0.0 0.11 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain TIP49 PF06068.13 AID29464.1 - 0.13 11.4 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_11 PF13086.6 AID29464.1 - 0.18 11.6 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF4129 PF13559.6 AID29466.1 - 0.0016 18.6 14.4 0.025 14.8 14.4 2.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4129) TPR_16 PF13432.6 AID29466.1 - 0.87 10.3 15.7 0.26 12.0 6.8 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat GPDPase_memb PF10110.9 AID29467.1 - 9.6e-05 21.3 11.7 9.6e-05 21.3 11.7 1.5 2 0 0 2 2 2 1 Membrane domain of glycerophosphoryl diester phosphodiesterase UPF0259 PF06790.11 AID29467.1 - 0.00092 19.0 17.6 0.013 15.3 17.6 2.0 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0259) DUF975 PF06161.11 AID29467.1 - 0.14 11.9 18.3 0.91 9.3 18.3 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF975) GtrA PF04138.14 AID29467.1 - 5.3 7.3 14.5 9.3 6.5 11.6 2.6 1 1 1 2 2 2 0 GtrA-like protein SAICAR_synt PF01259.18 AID29468.1 - 4.4e-11 42.9 0.1 4.9e-11 42.7 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF1127 PF06568.11 AID29469.1 - 2.9e-11 42.9 3.8 5.4e-11 42.0 3.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) Aminotran_1_2 PF00155.21 AID29470.1 - 1.5e-17 63.8 0.0 1.9e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID29470.1 - 3e-12 46.0 0.1 7.7e-12 44.7 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID29470.1 - 0.0036 17.3 0.0 0.0097 15.9 0.0 1.8 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Cys_Met_Meta_PP PF01053.20 AID29470.1 - 0.012 14.1 0.0 0.017 13.7 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme TPR_8 PF13181.6 AID29472.1 - 5.3e-11 41.8 0.2 0.067 13.4 0.0 6.1 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID29472.1 - 1.8e-10 40.1 17.8 0.0076 16.3 0.3 6.8 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID29472.1 - 8.8e-09 34.8 11.4 0.086 12.7 0.1 6.7 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID29472.1 - 9.2e-07 29.1 18.9 0.0035 17.6 3.3 6.3 6 1 0 6 6 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 AID29472.1 - 3.9e-06 27.3 6.0 0.013 16.0 0.2 5.0 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID29472.1 - 3.3e-05 24.3 18.2 0.85 10.6 0.1 7.5 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID29472.1 - 4.2e-05 23.1 1.8 1.1 9.0 0.1 4.3 5 0 0 5 5 4 2 TPR repeat TPR_17 PF13431.6 AID29472.1 - 0.001 19.3 0.0 1.7 9.2 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 AID29472.1 - 0.011 15.7 16.6 0.45 10.6 0.2 6.7 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_16 PF13432.6 AID29472.1 - 0.027 15.1 20.1 1 10.0 0.8 6.2 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_MalT PF17874.1 AID29472.1 - 0.039 13.3 14.2 0.14 11.5 6.0 3.2 4 0 0 4 4 4 0 MalT-like TPR region TPR_4 PF07721.14 AID29472.1 - 0.065 13.9 22.4 1.4 9.7 0.7 6.1 6 0 0 6 6 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 AID29472.1 - 0.41 10.9 4.1 2 8.7 0.4 3.6 3 1 1 4 4 3 0 Anaphase-promoting complex, cyclosome, subunit 3 OMP_b-brl PF13505.6 AID29473.1 - 1.2e-24 87.4 10.7 1.4e-24 87.2 10.7 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 AID29473.1 - 3.4e-07 30.2 2.7 1.8e-06 27.8 2.7 1.9 1 1 0 1 1 1 1 OmpA-like transmembrane domain Opacity PF02462.15 AID29473.1 - 1.3e-06 28.5 0.2 7.3e-06 26.1 0.2 2.0 1 1 0 1 1 1 1 Opacity family porin protein Porin_2 PF02530.14 AID29473.1 - 0.006 15.9 0.1 0.006 15.9 0.1 2.9 3 0 0 3 3 3 1 Porin subfamily OMP_b-brl_2 PF13568.6 AID29473.1 - 0.0063 16.6 3.4 0.16 12.0 0.1 2.6 1 1 1 2 2 2 2 Outer membrane protein beta-barrel domain KdgM PF06178.13 AID29473.1 - 0.058 13.0 0.1 0.15 11.7 0.1 1.7 1 1 0 1 1 1 0 Oligogalacturonate-specific porin protein (KdgM) DUF1992 PF09350.10 AID29474.1 - 0.0042 17.2 0.0 3.8 7.7 0.0 2.7 2 0 0 2 2 2 2 Domain of unknown function (DUF1992) Cupin_2 PF07883.11 AID29478.1 - 2.3e-05 24.0 0.0 4.5e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 AID29478.1 - 0.00018 21.1 0.1 0.0003 20.4 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) CENP-C_C PF11699.8 AID29478.1 - 0.15 12.3 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like LPG_synthase_TM PF03706.13 AID29479.1 - 2.8e-11 43.5 39.5 3.7e-11 43.1 39.5 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF962 PF06127.11 AID29479.1 - 0.095 12.8 1.5 23 5.2 0.3 3.4 2 1 0 2 2 2 0 Protein of unknown function (DUF962) Ppx-GppA PF02541.16 AID29480.1 - 1.4e-41 142.8 0.0 1.7e-41 142.5 0.0 1.0 1 0 0 1 1 1 1 Ppx/GppA phosphatase family MreB_Mbl PF06723.13 AID29480.1 - 0.013 14.3 0.0 0.024 13.5 0.0 1.4 1 0 0 1 1 1 0 MreB/Mbl protein FtsJ PF01728.19 AID29481.1 - 7.3e-54 182.6 0.0 8.9e-54 182.3 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 AID29481.1 - 1.7e-05 24.7 0.0 0.013 15.3 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 AID29481.1 - 0.0036 17.2 0.0 0.017 15.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltrans_Mon PF14314.6 AID29481.1 - 0.034 12.2 0.0 0.044 11.8 0.0 1.1 1 0 0 1 1 1 0 Virus-capping methyltransferase MFS_1 PF07690.16 AID29482.1 - 4.1e-48 164.1 60.5 1.9e-40 138.9 40.1 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 AID29482.1 - 9e-05 21.1 11.6 9e-05 21.1 11.6 2.4 2 1 0 2 2 2 1 Transmembrane secretion effector MFS_2 PF13347.6 AID29482.1 - 0.00029 19.5 5.3 0.00029 19.5 5.3 2.8 3 0 0 3 3 3 2 MFS/sugar transport protein MAPEG PF01124.18 AID29485.1 - 3.7e-17 62.4 10.2 4.4e-17 62.2 10.2 1.0 1 0 0 1 1 1 1 MAPEG family Acyl_transf_3 PF01757.22 AID29486.1 - 3.4e-20 72.4 42.8 5.6e-19 68.4 42.8 2.0 1 1 0 1 1 1 1 Acyltransferase family DNA_pol_A_exo1 PF01612.20 AID29487.1 - 1.6e-34 119.1 0.0 7.1e-34 117.0 0.0 1.9 2 0 0 2 2 2 1 3'-5' exonuclease HRDC PF00570.23 AID29487.1 - 4.8e-12 45.7 0.4 1.7e-11 44.0 0.4 2.0 1 0 0 1 1 1 1 HRDC domain FERM_N_2 PF18038.1 AID29487.1 - 0.19 12.6 1.0 0.4 11.5 0.4 1.8 2 1 0 2 2 2 0 FERM N-terminal domain MFS_1 PF07690.16 AID29488.1 - 5.8e-27 94.5 48.7 2.8e-24 85.7 34.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID29488.1 - 1e-05 25.0 23.6 1.6e-05 24.4 23.6 1.2 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_3 PF05977.13 AID29488.1 - 0.00022 19.8 5.2 0.00022 19.8 5.2 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.6 AID29488.1 - 0.084 11.4 33.8 0.041 12.4 7.1 3.8 1 1 2 3 3 3 0 MFS/sugar transport protein MFS_1 PF07690.16 AID29490.1 - 1.9e-16 60.0 53.1 4.4e-12 45.6 26.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily UNC-93 PF05978.16 AID29490.1 - 0.19 11.4 3.1 0.43 10.3 3.1 1.7 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 DeoRC PF00455.22 AID29491.1 - 1.2e-40 139.1 0.5 1.4e-40 138.8 0.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID29491.1 - 9.6e-12 44.5 0.0 2e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID29491.1 - 8.4e-05 22.4 0.0 0.00015 21.6 0.0 1.4 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 AID29491.1 - 0.00095 18.8 0.4 0.0024 17.5 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 AID29491.1 - 0.0013 18.6 0.0 0.0031 17.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID29491.1 - 0.003 17.4 0.8 0.11 12.5 0.1 2.6 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID29491.1 - 0.0066 16.5 0.6 0.019 15.0 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID29491.1 - 0.034 14.1 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 AID29491.1 - 0.12 12.2 0.1 0.74 9.7 0.1 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Put_DNA-bind_N PF06971.13 AID29491.1 - 0.13 12.3 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus tRNA-synt_2 PF00152.20 AID29493.1 - 8e-90 301.1 0.0 9.9e-90 300.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 AID29493.1 - 3.4e-16 59.0 0.0 6e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain GAD PF02938.14 AID29493.1 - 2.1e-07 31.1 0.0 4e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 GAD domain tRNA-synt_2b PF00587.25 AID29493.1 - 0.02 14.9 0.0 0.049 13.6 0.0 1.7 1 1 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 AID29493.1 - 0.071 12.6 0.0 7.6 5.9 0.0 2.6 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) DNA_topoisoIV PF00521.20 AID29495.1 - 2.6e-141 471.4 0.0 3.4e-141 471.0 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 AID29495.1 - 8.1e-15 54.0 0.4 1.6e-07 30.7 0.0 3.6 3 0 0 3 3 3 3 DNA gyrase C-terminal domain, beta-propeller TFIIE_alpha PF02002.17 AID29495.1 - 0.04 13.8 0.7 0.11 12.3 0.7 1.7 1 0 0 1 1 1 0 TFIIE alpha subunit AI-2E_transport PF01594.16 AID29497.1 - 2e-41 142.2 24.4 2.8e-41 141.7 24.4 1.2 1 0 0 1 1 1 1 AI-2E family transporter DUF4519 PF15012.6 AID29497.1 - 0.23 11.7 0.6 0.82 9.9 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) EamA PF00892.20 AID29498.1 - 1.2e-15 57.9 37.3 4.8e-08 33.3 13.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 AID29498.1 - 6e-05 22.7 5.2 9e-05 22.1 5.2 1.4 1 0 0 1 1 1 1 Solute carrier family 35 CRT-like PF08627.10 AID29498.1 - 0.00019 20.5 5.7 0.00035 19.6 5.7 1.4 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like ATE_C PF04377.15 AID29499.1 - 2.3e-35 122.1 0.0 3.2e-35 121.7 0.0 1.2 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, C terminus ATE_N PF04376.13 AID29499.1 - 4.1e-16 59.1 0.8 9.3e-16 58.0 0.1 1.9 2 0 0 2 2 2 1 Arginine-tRNA-protein transferase, N terminus Acetyltransf_6 PF13480.7 AID29499.1 - 0.00017 21.7 0.5 0.00032 20.9 0.1 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain RDD PF06271.12 AID29500.1 - 1.2e-18 67.7 11.4 1.4e-18 67.4 11.4 1.1 1 0 0 1 1 1 1 RDD family DUF2207 PF09972.9 AID29500.1 - 0.96 8.1 2.2 1.3 7.7 2.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF903 PF06004.12 AID29501.1 - 0.11 12.4 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF903) Pyr_redox_2 PF07992.14 AID29502.1 - 4.4e-49 167.3 0.0 5.6e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID29502.1 - 2.4e-27 95.4 0.1 9.5e-27 93.4 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID29502.1 - 3.3e-20 72.4 0.6 1.9e-15 57.2 0.1 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID29502.1 - 2.2e-15 56.7 0.0 1.9e-11 43.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID29502.1 - 3e-09 36.7 0.8 1.1e-08 34.8 0.0 2.1 2 1 1 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 AID29502.1 - 6.4e-09 35.0 1.2 0.00039 19.2 0.1 3.2 2 1 2 4 4 4 2 HI0933-like protein DAO PF01266.24 AID29502.1 - 3.3e-07 30.2 5.8 0.0095 15.6 0.1 3.2 3 0 0 3 3 3 3 FAD dependent oxidoreductase GIDA PF01134.22 AID29502.1 - 3.8e-07 29.5 0.8 0.022 13.8 0.0 3.6 2 1 2 4 4 4 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 AID29502.1 - 4.2e-07 30.1 0.5 0.00017 21.7 0.3 2.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AID29502.1 - 6.6e-07 28.7 0.6 3.9e-05 22.9 0.6 2.5 2 0 0 2 2 2 1 FAD binding domain 3HCDH_N PF02737.18 AID29502.1 - 6.4e-06 26.2 0.1 0.0018 18.2 0.0 2.9 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID29502.1 - 9.1e-05 21.7 0.7 1.3 8.0 0.1 3.2 2 1 1 3 3 3 2 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 AID29502.1 - 0.00017 21.0 0.4 0.17 11.2 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 AID29502.1 - 0.0003 20.2 0.0 0.19 11.1 0.0 3.2 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XdhC_C PF13478.6 AID29502.1 - 0.02 15.4 0.0 1.9 9.0 0.0 2.7 3 1 0 3 3 2 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 AID29502.1 - 0.025 13.8 1.1 0.097 11.9 0.2 2.0 2 0 0 2 2 2 0 FAD binding domain Amino_oxidase PF01593.24 AID29502.1 - 0.026 13.8 0.1 0.15 11.3 0.0 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Thi4 PF01946.17 AID29502.1 - 0.047 12.9 0.2 0.88 8.8 0.1 2.4 2 0 0 2 2 2 0 Thi4 family NAD_binding_7 PF13241.6 AID29502.1 - 0.15 12.5 0.3 16 6.0 0.0 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 AID29502.1 - 0.66 9.9 2.3 4.7 7.2 0.0 2.9 2 1 1 3 3 3 0 FAD-NAD(P)-binding Abhydrolase_1 PF00561.20 AID29503.1 - 0.00011 22.0 0.0 0.00012 21.9 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID29503.1 - 0.061 12.6 0.0 0.089 12.0 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 OpgC_C PF10129.9 AID29504.1 - 6.7e-108 360.8 23.6 7.6e-108 360.6 23.6 1.0 1 0 0 1 1 1 1 OpgC protein Peripla_BP_3 PF13377.6 AID29505.1 - 6.6e-34 117.6 0.9 2.3e-33 115.9 0.3 2.1 2 1 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID29505.1 - 6.9e-19 68.3 0.0 3.1e-18 66.2 0.0 1.8 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 AID29505.1 - 3.3e-16 59.6 0.1 8e-16 58.4 0.0 1.5 2 0 0 2 2 2 1 Periplasmic binding protein domain LacI PF00356.21 AID29505.1 - 5.3e-11 42.1 0.2 1.4e-10 40.7 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family TetR_N PF00440.23 AID29505.1 - 0.062 13.1 0.1 0.29 10.9 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_35 PF13693.6 AID29505.1 - 0.12 12.4 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF423 PF04241.15 AID29508.1 - 1.8e-10 40.9 3.5 2.5e-10 40.4 3.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF423) JSRP PF15312.6 AID29508.1 - 0.047 13.6 0.3 0.079 12.9 0.3 1.3 1 0 0 1 1 1 0 Junctional sarcoplasmic reticulum protein FCD PF07729.12 AID29509.1 - 1.1e-20 74.4 10.7 1.9e-20 73.6 10.7 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID29509.1 - 1.6e-18 66.1 4.6 1.4e-16 59.9 0.4 2.5 2 0 0 2 2 2 2 Bacterial regulatory proteins, gntR family PaaX PF07848.12 AID29509.1 - 0.00072 19.7 2.3 0.24 11.6 0.1 2.4 2 0 0 2 2 2 2 PaaX-like protein HemN_C PF06969.16 AID29509.1 - 0.0061 16.6 0.2 0.026 14.6 0.1 2.0 2 0 0 2 2 2 1 HemN C-terminal domain MFS_1 PF07690.16 AID29510.1 - 2.4e-50 171.5 63.5 3.8e-37 128.0 36.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 AID29510.1 - 6.3e-16 58.2 19.2 5.9e-13 48.4 4.8 2.6 1 1 1 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 AID29510.1 - 2e-12 46.7 33.4 3.6e-08 32.7 11.3 3.4 1 1 3 4 4 4 3 Sugar (and other) transporter MFS_3 PF05977.13 AID29510.1 - 6.1e-06 24.9 33.6 2.2e-05 23.1 19.8 1.8 1 1 1 2 2 2 2 Transmembrane secretion effector MFS_4 PF06779.14 AID29510.1 - 0.092 12.0 35.2 0.29 10.4 33.6 1.9 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB DUF982 PF06169.12 AID29511.1 - 4e-24 84.5 0.6 4.4e-24 84.3 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) 4F5 PF04419.14 AID29512.1 - 1.5 9.7 11.7 3.6 8.5 11.7 1.8 1 1 0 1 1 1 0 4F5 protein family Glyco_transf_90 PF05686.12 AID29513.1 - 1e-16 60.9 0.0 1.4e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 90 Glyco_trans_1_2 PF13524.6 AID29513.1 - 0.052 13.9 1.4 0.12 12.8 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferases group 1 Aldo_ket_red PF00248.21 AID29514.1 - 3.1e-72 243.2 0.0 3.6e-72 243.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family PPK2 PF03976.14 AID29515.1 - 1.2e-113 378.3 0.8 1.6e-113 377.9 0.8 1.2 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) S4 PF01479.25 AID29516.1 - 2.2e-06 27.3 0.1 4e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 AID29516.1 - 0.005 16.6 0.1 0.0061 16.3 0.1 1.3 1 1 0 1 1 1 1 S4 domain TyrRSs_C PF16714.5 AID29516.1 - 0.0051 16.6 0.0 0.0055 16.5 0.0 1.1 1 0 0 1 1 1 1 Tyrosyl-tRNA synthetase C-terminal domain AsmA_2 PF13502.6 AID29517.1 - 9.1e-06 25.4 2.0 1.9e-05 24.3 2.0 1.5 1 1 0 1 1 1 1 AsmA-like C-terminal region AsmA_1 PF13109.6 AID29517.1 - 0.00048 19.7 0.0 0.00072 19.1 0.0 1.2 1 0 0 1 1 1 1 AsmA-like C-terminal region RibD_C PF01872.17 AID29518.1 - 2e-20 73.5 0.0 3e-20 72.9 0.0 1.2 1 0 0 1 1 1 1 RibD C-terminal domain ALAD PF00490.21 AID29520.1 - 9.1e-136 452.2 0.0 1e-135 452.0 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Amdase PF17645.1 AID29520.1 - 0.12 12.0 0.6 1.7 8.2 0.0 2.3 2 1 0 2 2 2 0 Arylmalonate decarboxylase Adeno_PV PF03910.13 AID29520.1 - 2.9 6.5 4.8 0.28 9.9 0.3 1.5 2 0 0 2 2 2 0 Adenovirus minor core protein PV DUF2066 PF09839.9 AID29522.1 - 1.8e-41 142.1 0.0 2.1e-41 141.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2066) ECH_2 PF16113.5 AID29523.1 - 6.8e-117 390.7 0.0 7.7e-117 390.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 AID29523.1 - 1.3e-27 96.7 0.0 6e-27 94.6 0.0 1.8 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase HTH_27 PF13463.6 AID29525.1 - 2.9e-12 46.9 0.0 7.6e-12 45.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 AID29525.1 - 2e-09 37.2 0.0 6.4e-09 35.6 0.0 1.8 2 0 0 2 2 2 1 MarR family MarR PF01047.22 AID29525.1 - 8.8e-05 22.4 0.0 0.00021 21.2 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID29525.1 - 0.0013 18.7 0.0 0.002 18.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 AID29525.1 - 0.013 15.6 0.0 0.023 14.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_57 PF18679.1 AID29525.1 - 0.034 14.5 0.1 0.067 13.5 0.0 1.5 2 0 0 2 2 2 0 ThcOx helix turn helix domain HxlR PF01638.17 AID29525.1 - 0.07 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix YkuD PF03734.14 AID29528.1 - 6.9e-29 101.1 0.0 1e-28 100.6 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain PG_binding_1 PF01471.18 AID29528.1 - 2.9e-10 40.2 1.0 1.1e-08 35.2 0.0 2.8 3 0 0 3 3 3 1 Putative peptidoglycan binding domain Streptin-Immun PF11083.8 AID29528.1 - 0.14 12.6 0.0 0.46 10.9 0.0 1.8 2 0 0 2 2 2 0 Lantibiotic streptin immunity protein Na_H_Exchanger PF00999.21 AID29529.1 - 6.8e-61 206.1 49.6 8.8e-61 205.8 49.6 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family SHMT PF00464.19 AID29530.1 - 5e-184 611.5 0.0 5.8e-184 611.3 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 AID29530.1 - 7.8e-11 41.7 0.0 1.2e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID29530.1 - 5.8e-06 25.9 0.1 8.8e-06 25.3 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family GlpM PF06942.12 AID29533.1 - 9.1e-13 48.6 0.7 1.1e-12 48.4 0.7 1.0 1 0 0 1 1 1 1 GlpM protein DUF3147 PF11345.8 AID29533.1 - 0.053 13.9 9.8 0.42 11.0 9.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3147) VirB3 PF05101.13 AID29533.1 - 1.2 9.5 5.7 0.27 11.5 0.7 2.0 1 1 1 2 2 2 0 Type IV secretory pathway, VirB3-like protein ATP-cone PF03477.16 AID29534.1 - 6.5e-18 65.1 0.1 8.2e-18 64.8 0.1 1.1 1 0 0 1 1 1 1 ATP cone domain UXS1_N PF11803.8 AID29534.1 - 0.12 12.8 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal RibD_C PF01872.17 AID29535.1 - 4.7e-35 121.3 0.0 1e-34 120.1 0.0 1.5 2 0 0 2 2 2 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 AID29535.1 - 9e-07 28.7 0.0 0.0021 17.9 0.0 2.4 1 1 1 2 2 2 2 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 AID29535.1 - 0.0025 17.6 0.0 0.0038 17.0 0.0 1.3 1 0 0 1 1 1 1 MafB19-like deaminase Lum_binding PF00677.17 AID29536.1 - 7.6e-45 150.8 0.1 1e-22 79.9 0.0 2.0 2 0 0 2 2 2 2 Lumazine binding domain DMRL_synthase PF00885.19 AID29537.1 - 1.6e-43 148.0 0.1 1.8e-43 147.8 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase NusB PF01029.18 AID29538.1 - 3.3e-32 111.5 0.0 3.8e-32 111.3 0.0 1.0 1 0 0 1 1 1 1 NusB family MFS_1 PF07690.16 AID29539.1 - 4e-25 88.5 63.2 5e-14 52.0 27.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID29539.1 - 1.1 8.1 38.3 0.64 8.8 14.7 2.6 2 1 0 2 2 2 0 Sugar (and other) transporter OpuAC PF04069.12 AID29540.1 - 2.3e-53 181.4 2.8 2.7e-53 181.2 2.8 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Lipid_DES PF08557.10 AID29540.1 - 0.18 11.3 0.1 0.31 10.5 0.1 1.3 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) BPD_transp_1 PF00528.22 AID29541.1 - 1.4e-17 64.0 18.0 1.4e-17 64.0 18.0 3.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID29542.1 - 1.9e-30 106.2 0.0 2.9e-30 105.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29542.1 - 8.4e-08 32.4 0.3 0.011 15.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID29542.1 - 0.00022 21.5 0.1 0.00078 19.7 0.1 1.9 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 AID29542.1 - 0.00032 19.6 0.1 0.28 10.0 0.0 2.4 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_30 PF13604.6 AID29542.1 - 0.00035 20.4 0.2 0.00092 19.0 0.1 1.9 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 AID29542.1 - 0.00047 20.6 0.0 0.00073 20.0 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID29542.1 - 0.00067 19.3 0.1 0.0018 17.9 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 AID29542.1 - 0.0015 17.8 0.0 0.0025 17.1 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin RsgA_GTPase PF03193.16 AID29542.1 - 0.0048 16.8 0.0 0.009 15.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase T2SSE PF00437.20 AID29542.1 - 0.007 15.5 0.4 0.1 11.7 0.3 2.1 2 0 0 2 2 2 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 AID29542.1 - 0.02 14.3 0.0 0.18 11.1 0.0 2.2 3 0 0 3 3 3 0 FtsK/SpoIIIE family cobW PF02492.19 AID29542.1 - 0.02 14.5 0.6 0.079 12.5 0.2 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 AID29542.1 - 0.021 15.0 0.0 0.067 13.3 0.0 1.8 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 AID29542.1 - 0.023 14.6 0.2 0.044 13.7 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea AAA_23 PF13476.6 AID29542.1 - 0.026 15.0 0.0 0.039 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID29542.1 - 0.03 14.1 0.0 0.043 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 AID29542.1 - 0.032 13.7 0.0 1.9 7.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 AID29542.1 - 0.04 13.8 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 AID29542.1 - 0.056 13.2 0.1 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 AID29542.1 - 0.067 13.4 0.4 0.16 12.2 0.2 1.8 2 0 0 2 2 1 0 AAA domain AAA PF00004.29 AID29542.1 - 0.075 13.5 0.0 0.47 10.9 0.0 2.2 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 AID29542.1 - 0.08 12.1 0.0 0.097 11.8 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 AID29542.1 - 0.086 13.4 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID29542.1 - 0.087 12.4 0.0 3 7.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 AID29542.1 - 0.088 12.7 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 AID29542.1 - 0.11 11.7 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain ATP_bind_1 PF03029.17 AID29542.1 - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF3584 PF12128.8 AID29542.1 - 0.17 9.3 0.1 0.23 8.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) BPD_transp_1 PF00528.22 AID29543.1 - 8e-18 64.8 11.6 8e-18 64.8 11.6 2.1 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component FTR1 PF03239.14 AID29543.1 - 2.7 7.1 9.7 1.3 8.1 2.8 2.2 2 0 0 2 2 2 0 Iron permease FTR1 family H_PPase PF03030.16 AID29544.1 - 1.9e-249 829.7 47.9 2.2e-249 829.5 47.9 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase SmpA_OmlA PF04355.13 AID29545.1 - 9.9e-22 76.5 0.2 1.6e-21 75.9 0.2 1.3 1 0 0 1 1 1 1 SmpA / OmlA family Ubiq_cyt_C_chap PF03981.12 AID29546.1 - 7.8e-43 145.9 0.0 1.1e-42 145.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone Transketolase_C PF02780.20 AID29546.1 - 0.017 15.0 0.0 0.042 13.7 0.0 1.7 2 0 0 2 2 2 0 Transketolase, C-terminal domain YceD PF02620.17 AID29547.1 - 1.4e-08 34.9 0.0 2e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Large ribosomal RNA subunit accumulation protein YceD FA_synthesis PF02504.15 AID29548.1 - 1e-96 323.8 0.7 1.1e-96 323.6 0.7 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein ACP_syn_III_C PF08541.10 AID29549.1 - 1.7e-38 130.7 3.7 3.2e-37 126.6 0.2 2.7 3 0 0 3 3 3 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 AID29549.1 - 5.5e-32 109.5 1.0 5.5e-32 109.5 1.0 2.2 3 0 0 3 3 3 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 AID29549.1 - 3.8e-08 33.0 0.4 1.8e-07 30.8 0.0 2.0 2 0 0 2 2 2 1 Thiolase, N-terminal domain Chal_sti_synt_N PF00195.19 AID29549.1 - 0.00026 20.5 0.3 0.00055 19.4 0.3 1.5 1 1 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain FAE1_CUT1_RppA PF08392.12 AID29549.1 - 0.0013 18.1 0.0 0.0032 16.8 0.0 1.6 2 0 0 2 2 2 1 FAE1/Type III polyketide synthase-like protein Thiolase_C PF02803.18 AID29549.1 - 0.0015 18.2 0.1 2.1 8.0 0.0 2.4 2 0 0 2 2 2 2 Thiolase, C-terminal domain ALP_N PF17989.1 AID29549.1 - 0.073 13.2 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Actin like proteins N terminal domain Ketoacyl-synt_C PF02801.22 AID29549.1 - 0.074 13.1 0.8 0.61 10.1 0.1 2.4 2 1 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain Bac_DNA_binding PF00216.21 AID29550.1 - 1.4e-26 92.5 0.1 1.6e-26 92.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 AID29550.1 - 0.00047 20.2 0.0 0.00053 20.1 0.0 1.2 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif MerR_1 PF13411.6 AID29552.1 - 1.2e-25 89.4 0.4 3.1e-25 88.1 0.2 1.7 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AID29552.1 - 2.2e-08 33.7 0.0 3.8e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 MerR family regulatory protein HTH_Tnp_1 PF01527.20 AID29552.1 - 0.0061 16.9 0.0 0.013 15.8 0.0 1.6 1 0 0 1 1 1 1 Transposase HTH_17 PF12728.7 AID29552.1 - 0.046 13.9 0.0 0.16 12.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain DUF883 PF05957.13 AID29553.1 - 5.2e-08 33.4 2.1 7.6e-08 32.9 2.1 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) DUF1192 PF06698.11 AID29553.1 - 0.075 13.1 0.0 0.075 13.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) CusF_Ec PF11604.8 AID29556.1 - 0.11 12.5 0.0 0.27 11.2 0.0 1.7 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF HTH_31 PF13560.6 AID29557.1 - 2.7e-05 24.4 0.1 2.9e-05 24.3 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID29557.1 - 4.8e-05 23.3 0.0 5.3e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID29557.1 - 0.0018 18.2 0.0 0.002 18.1 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain tRNA_edit PF04073.15 AID29558.1 - 6.1e-15 55.4 0.4 1.1e-07 31.9 0.0 2.2 1 1 1 2 2 2 2 Aminoacyl-tRNA editing domain Cas_VVA1548 PF09652.10 AID29558.1 - 0.077 13.2 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative CRISPR-associated protein (Cas_VVA1548) Nucleoporin_C PF03177.14 AID29558.1 - 0.13 11.0 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Non-repetitive/WGA-negative nucleoporin C-terminal NDUF_B12 PF08122.12 AID29561.1 - 1.8 8.7 5.9 9.2 6.4 0.1 2.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B12 subunit family BioY PF02632.14 AID29563.1 - 0.0035 17.4 1.7 0.0042 17.1 1.7 1.1 1 0 0 1 1 1 1 BioY family PhoR PF11808.8 AID29563.1 - 2.6 8.5 5.4 2.8 8.4 3.9 1.8 1 1 1 2 2 2 0 Phosphate regulon sensor protein PhoR Wzy_C PF04932.15 AID29567.1 - 1.9e-05 24.3 12.0 1.9e-05 24.3 12.0 4.1 2 1 1 3 3 3 1 O-Antigen ligase YrhC PF14143.6 AID29567.1 - 7.7 6.7 13.5 0.23 11.5 2.1 3.2 2 1 0 2 2 2 0 YrhC-like protein Bac_transf PF02397.16 AID29568.1 - 2.1e-65 219.8 0.0 3.4e-65 219.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial sugar transferase CoA_binding_3 PF13727.6 AID29568.1 - 3.6e-53 180.2 0.8 7.6e-53 179.1 0.8 1.6 1 0 0 1 1 1 1 CoA-binding domain SepA PF17080.5 AID29568.1 - 3.4 8.0 9.7 1.5 9.2 0.7 2.4 1 1 1 2 2 2 0 Multidrug Resistance efflux pump Glyco_trans_4_4 PF13579.6 AID29569.1 - 7.3e-23 81.8 4.1 1.8e-21 77.2 0.8 2.3 2 0 0 2 2 2 2 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 AID29569.1 - 6e-22 78.4 0.9 1e-21 77.7 0.5 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 AID29569.1 - 1.6e-20 73.9 0.1 2.3e-20 73.4 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 AID29569.1 - 4.9e-19 68.5 0.0 8e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 AID29569.1 - 2.3e-08 34.2 0.0 3.8e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 AID29569.1 - 0.00083 19.7 0.0 0.0019 18.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Poly_export PF02563.16 AID29570.1 - 8.7e-22 77.1 0.0 1.9e-21 76.1 0.0 1.5 1 0 0 1 1 1 1 Polysaccharide biosynthesis/export protein SLBB PF10531.9 AID29570.1 - 1.2e-08 34.7 0.3 2.1e-08 33.9 0.3 1.4 1 0 0 1 1 1 1 SLBB domain Wzz PF02706.15 AID29571.1 - 2.2e-13 50.3 0.2 3.8e-13 49.5 0.2 1.4 1 0 0 1 1 1 1 Chain length determinant protein Rrn6 PF10214.9 AID29571.1 - 0.11 10.9 4.5 0.14 10.6 4.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor AAA_31 PF13614.6 AID29572.1 - 0.031 14.2 0.0 0.076 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain Acetyltransf_18 PF18014.1 AID29573.1 - 2.7e-29 101.5 0.0 3.7e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID29573.1 - 0.00015 22.0 0.0 0.00028 21.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID29573.1 - 0.006 16.5 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID29573.1 - 0.048 14.1 0.1 0.088 13.2 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID29573.1 - 0.1 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Asp_Glu_race PF01177.22 AID29574.1 - 5.2e-13 49.4 1.0 8.4e-13 48.7 1.0 1.3 1 1 0 1 1 1 1 Asp/Glu/Hydantoin racemase Amdase PF17645.1 AID29574.1 - 0.012 15.2 0.5 0.019 14.6 0.5 1.5 1 0 0 1 1 1 0 Arylmalonate decarboxylase BPD_transp_1 PF00528.22 AID29575.1 - 3.6e-12 46.4 18.8 3.6e-12 46.4 18.8 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID29576.1 - 6.4e-11 42.3 26.0 6.4e-11 42.3 26.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 AID29577.1 - 6.5e-22 78.7 8.0 8.6e-22 78.3 8.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID29577.1 - 6.1e-08 32.4 0.5 9e-08 31.8 0.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 AID29577.1 - 0.0077 16.0 2.7 0.0077 16.0 2.7 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence ABC_tran PF00005.27 AID29578.1 - 1.4e-28 100.1 0.0 2e-28 99.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID29578.1 - 9.6e-14 51.3 0.5 1.4e-12 47.5 0.1 2.5 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID29578.1 - 1.2e-06 28.6 0.1 0.00034 20.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID29578.1 - 0.0073 16.2 0.1 0.013 15.4 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase CE2_N PF17996.1 AID29578.1 - 0.0094 15.9 0.2 1.1 9.2 0.0 2.5 2 1 0 2 2 2 1 Carbohydrate esterase 2 N-terminal AAA PF00004.29 AID29578.1 - 0.01 16.3 0.1 0.019 15.4 0.1 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID29578.1 - 0.016 15.6 0.1 0.025 15.0 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 AID29578.1 - 0.086 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 AID29578.1 - 0.15 12.3 0.3 0.48 10.7 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID29578.1 - 0.24 11.7 0.6 0.54 10.5 0.6 1.8 1 1 0 1 1 1 0 AAA domain FCD PF07729.12 AID29579.1 - 3e-20 72.9 1.5 3e-20 72.9 1.5 1.6 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID29579.1 - 7.3e-16 57.6 1.1 1e-15 57.1 0.3 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family DUF4853 PF16145.5 AID29579.1 - 0.12 12.5 0.0 0.29 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4853) Acetyltransf_6 PF13480.7 AID29580.1 - 5.1e-27 94.8 2.9 1.1e-26 93.7 0.4 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Mig-14 PF07395.11 AID29580.1 - 0.02 14.3 0.2 0.25 10.7 0.1 2.4 2 1 0 2 2 2 0 Mig-14 Polysacc_deac_1 PF01522.21 AID29581.1 - 2.9e-43 146.7 0.0 6.9e-43 145.5 0.0 1.7 1 1 0 1 1 1 1 Polysaccharide deacetylase DUF2842 PF11003.8 AID29582.1 - 2.2e-18 66.3 9.4 2.5e-18 66.1 9.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2842) DUF4407 PF14362.6 AID29582.1 - 0.016 14.6 2.6 0.017 14.5 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) S_4TM PF18159.1 AID29582.1 - 0.019 14.3 5.1 0.023 14.0 5.1 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Phage_holin_3_6 PF07332.11 AID29582.1 - 0.042 13.9 7.8 0.047 13.7 7.8 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3989 PF13150.6 AID29582.1 - 0.082 12.7 1.0 0.1 12.4 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) Pilin_N PF07790.11 AID29582.1 - 0.49 11.4 2.4 0.68 10.9 2.4 1.2 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal ABC2_membrane_2 PF12679.7 AID29582.1 - 0.52 9.5 8.5 0.55 9.5 8.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein 4HB_MCP_1 PF12729.7 AID29582.1 - 2 7.9 3.9 0.99 8.9 2.2 1.3 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction COX15-CtaA PF02628.15 AID29583.1 - 9.2e-115 383.1 18.3 1.1e-114 382.9 18.3 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein APH_6_hur PF04655.14 AID29584.1 - 8.2e-107 356.3 0.1 9.4e-107 356.1 0.1 1.0 1 0 0 1 1 1 1 Aminoglycoside/hydroxyurea antibiotic resistance kinase APH PF01636.23 AID29584.1 - 1e-06 28.9 2.1 1.5e-06 28.3 2.1 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 AID29584.1 - 0.038 13.2 0.0 0.055 12.7 0.0 1.2 1 0 0 1 1 1 0 Fructosamine kinase Semialdhyde_dh PF01118.24 AID29585.1 - 1.4e-09 38.5 0.4 2.7e-08 34.3 0.1 2.5 1 1 1 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Arginase PF00491.21 AID29586.1 - 5.7e-81 272.1 0.6 6.8e-81 271.8 0.6 1.0 1 0 0 1 1 1 1 Arginase family Acyl_transf_3 PF01757.22 AID29587.1 - 2.4e-17 63.0 43.1 2.9e-17 62.7 43.1 1.1 1 0 0 1 1 1 1 Acyltransferase family GDPD PF03009.17 AID29588.1 - 9.9e-19 68.1 0.1 1.4e-18 67.6 0.1 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family DUF4996 PF16387.5 AID29588.1 - 2.3e-10 40.8 0.0 5.6e-10 39.6 0.0 1.7 1 1 0 1 1 1 1 Domain of unknown function PI-PLC-X PF00388.19 AID29588.1 - 0.17 11.5 0.0 0.32 10.6 0.0 1.4 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain Exostosin PF03016.15 AID29588.1 - 0.2 10.8 0.0 0.29 10.3 0.0 1.2 1 0 0 1 1 1 0 Exostosin family MFS_1 PF07690.16 AID29589.1 - 2.4e-52 178.0 53.8 2.4e-52 178.0 53.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Ribosomal_S9 PF00380.19 AID29590.1 - 7.2e-46 155.6 0.5 9.3e-46 155.3 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 AID29591.1 - 5.5e-54 181.7 0.0 6.6e-54 181.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 4HBT PF03061.22 AID29592.1 - 7.6e-15 55.0 0.0 1.2e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 AID29592.1 - 0.0013 19.1 0.0 0.0014 18.9 0.0 1.2 1 0 0 1 1 1 1 Thioesterase-like superfamily ECH_1 PF00378.20 AID29593.1 - 1.5e-54 184.9 1.1 1.8e-54 184.7 1.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID29593.1 - 1.7e-31 110.0 0.3 2.7e-28 99.4 0.3 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Glyoxalase PF00903.25 AID29594.1 - 8.7e-11 42.1 0.1 1.1e-10 41.8 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29594.1 - 0.00016 22.4 0.4 0.00044 21.0 0.4 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID29594.1 - 0.11 12.7 0.1 0.5 10.7 0.1 1.9 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AAA_21 PF13304.6 AID29595.1 - 5.9e-20 72.3 0.0 4.1e-11 43.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AID29595.1 - 1.1e-15 58.3 0.0 8.1e-07 29.1 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 AID29595.1 - 1.7e-10 41.7 0.0 2.4e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID29595.1 - 1.8e-10 40.6 0.0 4.3e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID29595.1 - 3.1e-06 26.8 0.0 5.7e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID29595.1 - 1.2e-05 25.6 0.0 7.4e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 AID29595.1 - 0.0001 22.8 0.1 0.00059 20.4 0.1 1.9 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 AID29595.1 - 0.002 18.5 0.1 0.011 16.1 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 AID29595.1 - 0.002 17.7 0.0 0.0034 17.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID29595.1 - 0.0081 16.6 0.0 0.023 15.1 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 AID29595.1 - 0.0086 15.8 0.1 0.037 13.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 AID29595.1 - 0.012 14.5 0.6 0.016 14.0 0.6 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class NACHT PF05729.12 AID29595.1 - 0.073 13.0 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain RsgA_GTPase PF03193.16 AID29595.1 - 0.073 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 AID29595.1 - 0.084 13.0 0.0 2.1 8.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain DUF2813 PF11398.8 AID29595.1 - 0.14 11.4 0.0 0.43 9.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) CoA_binding_2 PF13380.6 AID29596.1 - 7.1e-38 129.7 0.0 8.3e-38 129.5 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 AID29596.1 - 4.1e-05 24.2 0.0 0.00026 21.6 0.0 2.0 2 0 0 2 2 2 1 CoA binding domain Cys_Met_Meta_PP PF01053.20 AID29597.1 - 9.7e-137 455.6 0.0 1.1e-136 455.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID29597.1 - 7.9e-11 41.7 0.0 1.6e-10 40.7 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 AID29597.1 - 4.1e-09 35.9 0.1 7.2e-09 35.1 0.1 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AID29597.1 - 4.1e-09 36.2 0.1 6.6e-09 35.5 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 AID29597.1 - 3.5e-06 26.5 0.0 7.8e-06 25.4 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase GDC-P PF02347.16 AID29597.1 - 0.0031 16.4 0.0 0.0043 15.9 0.0 1.1 1 0 0 1 1 1 1 Glycine cleavage system P-protein Met_gamma_lyase PF06838.11 AID29597.1 - 0.019 13.5 0.2 0.044 12.3 0.2 1.5 1 1 0 1 1 1 0 Methionine gamma-lyase Cupin_3 PF05899.12 AID29598.1 - 5.1e-27 93.4 0.8 6.8e-27 93.0 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID29598.1 - 0.011 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Cupin domain AraC_binding PF02311.19 AID29598.1 - 0.14 12.1 0.0 0.26 11.2 0.0 1.5 1 1 1 2 2 2 0 AraC-like ligand binding domain p450 PF00067.22 AID29601.1 - 1.1e-24 87.0 0.1 7.7e-17 61.2 0.1 2.9 2 1 0 2 2 2 2 Cytochrome P450 DAO PF01266.24 AID29602.1 - 5.2e-39 134.8 1.2 6.1e-39 134.6 1.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID29602.1 - 9.6e-12 44.7 0.1 5e-11 42.4 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID29602.1 - 3.7e-08 32.5 0.2 0.0019 17.0 0.3 2.1 2 0 0 2 2 2 2 HI0933-like protein Amino_oxidase PF01593.24 AID29602.1 - 8.6e-08 31.9 0.0 0.0023 17.3 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 AID29602.1 - 1.1e-07 31.9 0.8 2.1e-07 31.0 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID29602.1 - 3.2e-07 29.9 0.0 0.008 15.5 0.1 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID29602.1 - 1.6e-06 27.4 0.2 1e-05 24.8 0.2 1.9 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 AID29602.1 - 2.1e-06 27.0 0.4 0.017 14.2 0.4 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein GIDA PF01134.22 AID29602.1 - 1.2e-05 24.6 0.7 0.0012 18.0 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 AID29602.1 - 0.00016 21.7 0.9 0.36 10.8 0.1 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding Pyr_redox PF00070.27 AID29602.1 - 0.00016 22.2 0.1 0.016 15.7 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID29602.1 - 0.0008 18.7 0.2 0.0015 17.9 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 AID29602.1 - 0.0026 17.2 1.2 0.0087 15.5 1.2 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID29602.1 - 0.015 14.6 0.2 0.025 13.8 0.2 1.3 1 0 0 1 1 1 0 Thi4 family AlaDh_PNT_C PF01262.21 AID29602.1 - 0.042 13.1 0.1 0.065 12.5 0.1 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain MCRA PF06100.11 AID29602.1 - 0.068 11.9 0.0 0.49 9.1 0.0 1.9 2 0 0 2 2 2 0 MCRA family 3HCDH_N PF02737.18 AID29602.1 - 0.13 12.1 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 AID29602.1 - 0.2 10.4 0.3 0.38 9.6 0.3 1.4 1 0 0 1 1 1 0 Tryptophan halogenase SBP_bac_3 PF00497.20 AID29603.1 - 0.097 12.1 0.3 0.5 9.7 0.0 2.0 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 L27 PF02828.16 AID29603.1 - 8 6.3 6.7 31 4.4 0.2 3.1 4 0 0 4 4 4 0 L27 domain CLP_protease PF00574.23 AID29604.1 - 1.8e-85 285.4 0.0 2.2e-85 285.2 0.0 1.0 1 0 0 1 1 1 1 Clp protease AAA_2 PF07724.14 AID29605.1 - 5.6e-50 169.8 0.0 1.3e-49 168.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) zf-C4_ClpX PF06689.13 AID29605.1 - 2.7e-20 72.0 3.8 6.8e-20 70.7 3.8 1.7 1 0 0 1 1 1 1 ClpX C4-type zinc finger ClpB_D2-small PF10431.9 AID29605.1 - 7.5e-17 61.2 0.7 2e-16 59.8 0.4 1.9 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 AID29605.1 - 9.3e-17 61.7 0.0 4.3e-16 59.5 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID29605.1 - 1.7e-06 28.1 0.0 1.5e-05 25.0 0.1 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID29605.1 - 4.9e-06 26.1 0.1 0.0006 19.2 0.1 2.8 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 AID29605.1 - 1.8e-05 24.6 0.1 5.2e-05 23.1 0.1 1.7 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 AID29605.1 - 6.9e-05 22.0 0.0 0.00011 21.3 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain AAA_22 PF13401.6 AID29605.1 - 8e-05 22.9 0.3 0.0019 18.5 0.3 2.6 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 AID29605.1 - 0.00021 21.0 0.0 0.054 13.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 AID29605.1 - 0.0011 19.4 0.1 0.0037 17.7 0.0 1.9 2 1 0 2 2 1 1 AAA ATPase domain Sigma54_activ_2 PF14532.6 AID29605.1 - 0.0011 19.1 0.0 0.0032 17.6 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_14 PF13173.6 AID29605.1 - 0.002 18.1 0.1 0.0074 16.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 AID29605.1 - 0.0035 16.9 0.0 0.01 15.3 0.0 1.8 2 0 0 2 2 1 1 P-loop containing dynein motor region NACHT PF05729.12 AID29605.1 - 0.0048 16.8 0.0 0.076 12.9 0.0 2.5 3 0 0 3 3 2 1 NACHT domain IstB_IS21 PF01695.17 AID29605.1 - 0.0049 16.6 0.0 0.0096 15.7 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein Rad17 PF03215.15 AID29605.1 - 0.0067 16.4 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 Rad17 P-loop domain ABC_tran PF00005.27 AID29605.1 - 0.0078 16.7 0.0 0.021 15.3 0.0 1.8 2 0 0 2 2 1 1 ABC transporter RNA_helicase PF00910.22 AID29605.1 - 0.0079 16.6 0.0 0.025 15.0 0.0 1.9 1 1 0 1 1 1 1 RNA helicase PduV-EutP PF10662.9 AID29605.1 - 0.011 15.4 0.1 0.024 14.4 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation TsaE PF02367.17 AID29605.1 - 0.017 15.1 0.0 0.034 14.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 AID29605.1 - 0.04 14.5 0.0 0.18 12.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 AID29605.1 - 0.04 13.0 0.0 0.071 12.2 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein TIP49 PF06068.13 AID29605.1 - 0.051 12.8 0.0 0.091 11.9 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_21 PF13304.6 AID29605.1 - 0.064 13.1 0.0 0.13 12.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_3 PF07726.11 AID29605.1 - 0.084 12.7 0.1 0.32 10.9 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID29605.1 - 0.092 13.0 0.0 0.23 11.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID29605.1 - 0.097 12.2 0.1 0.23 11.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 AID29605.1 - 0.1 11.9 1.1 1.4 8.2 0.1 2.2 1 1 1 2 2 2 0 KaiC PhoH PF02562.16 AID29605.1 - 0.1 12.0 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_24 PF13479.6 AID29605.1 - 0.12 12.0 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 AID29605.1 - 0.13 12.6 0.7 4.7 7.5 0.1 2.8 3 1 1 4 4 2 0 AAA domain AAA_8 PF12780.7 AID29605.1 - 0.2 11.0 0.0 0.71 9.2 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region D4 Lon_C PF05362.13 AID29606.1 - 1e-97 325.7 0.6 1.7e-97 324.9 0.6 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 AID29606.1 - 4.3e-38 131.3 0.2 4.3e-38 131.3 0.2 2.0 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 AID29606.1 - 2.7e-20 73.2 0.0 9.1e-20 71.4 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ChlI PF13541.6 AID29606.1 - 3.2e-09 36.7 0.0 8.5e-09 35.3 0.0 1.8 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 AID29606.1 - 1.2e-08 35.1 0.0 2.9e-08 33.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_PrkA PF08298.11 AID29606.1 - 1e-06 27.9 0.0 2.6e-06 26.6 0.0 1.6 2 0 0 2 2 2 1 PrkA AAA domain AAA_16 PF13191.6 AID29606.1 - 0.00066 20.1 0.1 0.0064 16.9 0.0 2.7 2 0 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 AID29606.1 - 0.0012 18.7 0.0 0.004 16.9 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 AID29606.1 - 0.0012 19.4 0.2 0.21 12.1 0.0 3.4 1 1 2 3 3 3 1 ABC transporter AAA_18 PF13238.6 AID29606.1 - 0.0021 18.6 0.7 0.0094 16.5 0.0 2.5 2 1 0 2 2 1 1 AAA domain AAA_22 PF13401.6 AID29606.1 - 0.0037 17.5 0.1 0.052 13.8 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 AID29606.1 - 0.0074 16.3 0.0 0.018 15.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID29606.1 - 0.014 15.3 0.0 0.037 13.9 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 AID29606.1 - 0.015 15.1 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein RAB3GAP2_C PF14656.6 AID29606.1 - 0.025 12.8 1.8 0.04 12.2 1.8 1.2 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit C-terminus NACHT PF05729.12 AID29606.1 - 0.046 13.6 0.1 1.4 8.8 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 AID29606.1 - 0.057 13.6 0.1 0.17 12.0 0.1 1.8 1 0 0 1 1 1 0 AAA domain ECH_2 PF16113.5 AID29606.1 - 0.064 12.8 3.3 0.041 13.4 1.3 1.7 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase RNA_helicase PF00910.22 AID29606.1 - 0.069 13.5 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Rad17 PF03215.15 AID29606.1 - 0.071 13.0 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Rad17 P-loop domain Imm70 PF15601.6 AID29606.1 - 0.081 12.5 0.1 0.18 11.3 0.1 1.6 1 0 0 1 1 1 0 Immunity protein 70 AAA_3 PF07726.11 AID29606.1 - 0.085 12.7 0.0 0.26 11.2 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 AID29606.1 - 0.74 9.9 4.8 0.3 11.2 0.1 2.5 2 0 0 2 2 2 0 Shikimate kinase AAA_23 PF13476.6 AID29606.1 - 0.8 10.2 7.6 18 5.8 0.0 2.5 2 1 0 2 2 2 0 AAA domain Bac_DNA_binding PF00216.21 AID29607.1 - 3.9e-33 113.5 0.0 4.3e-33 113.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 AID29607.1 - 6.2e-08 32.8 0.0 6.5e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_euk_2 PF18289.1 AID29607.1 - 0.00027 21.0 0.1 0.00039 20.5 0.1 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_2 PF18175.1 AID29607.1 - 0.00036 20.3 0.0 0.00051 19.8 0.0 1.1 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 DUF2267 PF10025.9 AID29607.1 - 0.023 15.0 0.0 0.031 14.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) SIS PF01380.22 AID29608.1 - 5e-11 42.6 0.0 7.5e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 AID29608.1 - 0.012 15.6 0.0 1 9.4 0.0 2.3 2 0 0 2 2 2 0 SIS domain Med15 PF09606.10 AID29608.1 - 0.28 9.8 1.5 0.37 9.4 1.5 1.0 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal Aldo_ket_red PF00248.21 AID29609.1 - 1.1e-44 152.8 0.0 1.3e-44 152.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Creatininase PF02633.14 AID29610.1 - 1.8e-25 89.8 0.1 2.7e-25 89.2 0.1 1.3 1 0 0 1 1 1 1 Creatinine amidohydrolase DUF2905 PF11146.8 AID29611.1 - 0.29 11.4 3.2 2.5 8.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2905) BPD_transp_1 PF00528.22 AID29612.1 - 8.9e-17 61.4 20.8 8.9e-17 61.4 20.8 2.1 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID29613.1 - 9.3e-19 67.9 19.0 9.3e-19 67.9 19.0 2.7 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component Glucos_trans_II PF14264.6 AID29613.1 - 0.013 14.9 23.6 0.022 14.1 3.5 3.2 2 1 1 3 3 3 0 Glucosyl transferase GtrII DUF3887 PF13026.6 AID29614.1 - 0.056 14.3 0.1 0.13 13.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3887) CTXphi_pIII-N1 PF16710.5 AID29614.1 - 0.066 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII PSD3 PF07626.11 AID29614.1 - 0.12 12.9 0.0 3.2 8.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1587) SBP_bac_8 PF13416.6 AID29615.1 - 4.8e-11 43.0 2.6 6.8e-11 42.5 2.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID29615.1 - 2.5e-07 31.0 3.5 4e-07 30.3 3.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 AID29616.1 - 2.6e-30 105.7 0.0 4.1e-30 105.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID29616.1 - 4.7e-12 45.9 0.2 4.2e-11 42.8 0.0 2.6 2 1 0 2 2 2 1 TOBE domain OB_MalK PF17912.1 AID29616.1 - 9.5e-11 42.4 0.0 3.3e-10 40.6 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain CysA_C_terminal PF17850.1 AID29616.1 - 7.5e-10 39.2 0.8 7.6e-09 36.0 0.2 2.6 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA_21 PF13304.6 AID29616.1 - 1.3e-08 35.0 0.0 0.0042 16.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29616.1 - 6.4e-06 25.8 0.0 2.3e-05 23.9 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE PF03459.17 AID29616.1 - 1.8e-05 24.9 0.0 9.2e-05 22.7 0.0 2.1 2 0 0 2 2 2 1 TOBE domain RsgA_GTPase PF03193.16 AID29616.1 - 0.00011 22.2 0.7 0.00031 20.7 0.1 2.0 3 0 0 3 3 3 1 RsgA GTPase AAA_16 PF13191.6 AID29616.1 - 0.00026 21.4 0.2 0.00057 20.3 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID29616.1 - 0.0011 19.3 0.2 0.0018 18.6 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID29616.1 - 0.0012 18.6 0.2 0.0028 17.3 0.0 1.7 2 0 0 2 2 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 AID29616.1 - 0.0034 17.3 0.0 0.0054 16.7 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_33 PF13671.6 AID29616.1 - 0.0079 16.4 0.5 0.019 15.1 0.5 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID29616.1 - 0.0082 16.6 0.4 0.034 14.6 0.0 2.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 AID29616.1 - 0.013 15.3 0.0 0.21 11.3 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_28 PF13521.6 AID29616.1 - 0.016 15.5 0.3 0.039 14.2 0.3 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID29616.1 - 0.017 14.9 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID29616.1 - 0.026 15.0 0.0 0.053 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID29616.1 - 0.031 14.2 0.5 0.11 12.4 0.2 1.9 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 AID29616.1 - 0.035 13.7 0.0 0.077 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID29616.1 - 0.039 13.9 0.3 0.1 12.6 0.3 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 AID29616.1 - 0.039 13.4 0.3 0.77 9.2 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein ATPase_2 PF01637.18 AID29616.1 - 0.1 12.5 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 AID29616.1 - 0.11 11.7 0.2 0.18 11.0 0.2 1.3 1 0 0 1 1 1 0 NB-ARC domain Mg_chelatase PF01078.21 AID29616.1 - 0.16 11.4 0.0 0.31 10.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 AID29616.1 - 0.16 12.5 0.1 0.42 11.2 0.0 1.8 2 0 0 2 2 1 0 AAA domain MMR_HSR1 PF01926.23 AID29616.1 - 0.17 12.0 0.1 0.47 10.6 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 AID29616.1 - 0.17 12.3 0.1 0.39 11.1 0.1 1.6 1 0 0 1 1 1 0 RNA helicase AAA_14 PF13173.6 AID29616.1 - 0.19 11.8 0.3 0.55 10.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain RbsD_FucU PF05025.13 AID29617.1 - 1.3e-33 116.2 0.0 1.5e-33 116.0 0.0 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family PfkB PF00294.24 AID29618.1 - 3e-62 210.7 2.2 3.6e-62 210.4 2.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID29618.1 - 9e-10 38.3 0.0 1.5e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 AID29618.1 - 0.00011 21.8 0.1 0.00027 20.5 0.1 1.6 1 0 0 1 1 1 1 Carbohydrate kinase ADP_ribosyl_GH PF03747.14 AID29621.1 - 0.017 14.9 0.2 0.019 14.7 0.2 1.0 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase Pyrophosphatase PF00719.19 AID29622.1 - 5.5e-30 104.3 0.0 6.2e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase MttA_Hcf106 PF02416.16 AID29622.1 - 0.29 10.5 0.8 0.57 9.6 0.8 1.5 1 0 0 1 1 1 0 mttA/Hcf106 family adh_short_C2 PF13561.6 AID29623.1 - 7.9e-64 215.4 0.4 9.6e-64 215.1 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID29623.1 - 3.8e-49 166.8 0.2 4.5e-49 166.6 0.2 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID29623.1 - 2.9e-12 46.8 0.2 4.5e-12 46.2 0.2 1.2 1 0 0 1 1 1 1 KR domain BPD_transp_2 PF02653.16 AID29624.1 - 1.5e-44 152.2 47.4 2.3e-44 151.6 47.4 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 AID29625.1 - 5.6e-41 140.8 5.5 7.1e-41 140.5 5.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID29625.1 - 9e-11 41.7 0.3 1.1e-10 41.5 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family ABC_sub_bind PF04392.12 AID29625.1 - 0.04 13.2 2.2 0.1 11.8 0.5 2.0 1 1 1 2 2 2 0 ABC transporter substrate binding protein CSD2 PF17876.1 AID29625.1 - 0.12 12.6 0.0 0.29 11.3 0.0 1.6 1 0 0 1 1 1 0 Cold shock domain ABC_tran PF00005.27 AID29626.1 - 1.3e-26 93.7 0.0 2e-26 93.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29626.1 - 4.8e-06 26.6 0.1 0.0068 16.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID29626.1 - 0.00021 20.8 0.3 0.0014 18.1 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID29626.1 - 0.00081 19.9 0.1 0.0013 19.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID29626.1 - 0.0011 18.6 0.7 0.0024 17.5 0.3 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID29626.1 - 0.0027 16.6 0.3 8.4 5.1 0.2 3.0 3 0 0 3 3 3 2 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID29626.1 - 0.0065 16.4 0.1 0.012 15.5 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase TsaE PF02367.17 AID29626.1 - 0.021 14.8 0.1 0.042 13.8 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SbcCD_C PF13558.6 AID29626.1 - 0.036 14.3 0.0 4.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 AID29626.1 - 0.051 13.3 0.2 0.074 12.7 0.2 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_16 PF13191.6 AID29626.1 - 0.1 12.9 0.2 0.14 12.5 0.2 1.5 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 AID29626.1 - 0.14 12.1 0.1 0.24 11.3 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_13 PF13166.6 AID29626.1 - 0.23 10.0 0.0 0.29 9.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain ROK PF00480.20 AID29627.1 - 1.8e-36 126.1 0.0 3.1e-34 118.8 0.0 2.1 1 1 0 1 1 1 1 ROK family HTH_24 PF13412.6 AID29627.1 - 7.1e-09 35.1 0.1 1.4e-08 34.1 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID29627.1 - 4e-08 33.0 0.1 1.5e-07 31.2 0.1 2.0 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID29627.1 - 9.6e-07 28.6 0.1 2.1e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID29627.1 - 1.2e-06 28.4 0.0 2.8e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 AID29627.1 - 0.00079 19.3 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 AID29627.1 - 0.0013 18.8 0.0 0.003 17.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 AID29627.1 - 0.0053 16.9 0.2 0.014 15.5 0.2 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Crp PF00325.20 AID29627.1 - 0.013 15.1 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family DprA_WH PF17782.1 AID29627.1 - 0.02 15.0 0.0 0.045 13.9 0.0 1.6 1 0 0 1 1 1 0 DprA winged helix domain Fe_dep_repress PF01325.19 AID29627.1 - 0.02 15.1 0.0 0.041 14.1 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 AID29627.1 - 0.04 14.4 0.0 0.079 13.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_11 PF08279.12 AID29627.1 - 0.055 13.4 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 AID29627.1 - 0.09 12.6 0.1 0.55 10.1 0.1 2.4 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.20 AID29627.1 - 0.096 13.0 0.5 0.39 11.1 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator RPA_C PF08784.11 AID29627.1 - 0.21 12.3 0.0 0.39 11.4 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal Peptidase_M24 PF00557.24 AID29628.1 - 1.7e-30 106.3 0.0 2.6e-30 105.7 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID29628.1 - 1.4e-17 64.6 0.0 2.9e-17 63.6 0.0 1.6 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Peptidase_M20 PF01546.28 AID29629.1 - 6.5e-28 97.8 0.8 9e-28 97.4 0.8 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID29629.1 - 1.1e-10 41.4 2.0 1.9e-10 40.6 0.0 2.1 2 0 0 2 2 2 1 Peptidase dimerisation domain BPD_transp_1 PF00528.22 AID29630.1 - 5.3e-28 98.0 14.6 5.3e-28 98.0 14.6 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_YMGG PF13441.6 AID29630.1 - 0.028 14.2 4.4 0.14 11.9 1.5 2.3 2 0 0 2 2 2 0 YMGG-like Gly-zipper BTP PF05232.12 AID29630.1 - 1.8 8.7 6.7 6.2 7.0 5.3 2.6 1 1 0 1 1 1 0 Chlorhexidine efflux transporter ABC_tran PF00005.27 AID29631.1 - 3.8e-33 114.9 0.0 5e-33 114.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID29631.1 - 3.1e-05 23.9 0.4 0.2 11.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID29631.1 - 9.7e-05 22.8 0.1 0.00024 21.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID29631.1 - 0.00013 22.2 0.0 0.0005 20.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID29631.1 - 0.00038 20.2 0.0 0.018 14.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 AID29631.1 - 0.0044 17.0 0.1 0.0075 16.2 0.1 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 AID29631.1 - 0.0044 16.7 0.3 0.0086 15.8 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 AID29631.1 - 0.0074 16.7 0.0 0.24 11.8 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID29631.1 - 0.011 15.2 0.0 3.3 7.1 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_18 PF13238.6 AID29631.1 - 0.013 16.1 0.0 0.5 10.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 AID29631.1 - 0.017 15.0 0.0 0.035 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC_ATPase PF09818.9 AID29631.1 - 0.026 13.3 0.0 0.31 9.8 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID29631.1 - 0.026 14.4 0.3 0.056 13.3 0.1 1.6 2 0 0 2 2 1 0 RsgA GTPase NACHT PF05729.12 AID29631.1 - 0.029 14.3 0.0 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 NACHT domain NB-ARC PF00931.22 AID29631.1 - 0.035 13.3 0.1 0.076 12.2 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_25 PF13481.6 AID29631.1 - 0.065 12.8 0.5 1.2 8.7 0.1 2.4 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 AID29631.1 - 0.066 12.6 0.1 0.51 9.7 0.0 2.3 2 2 0 2 2 2 0 Magnesium chelatase, subunit ChlI Adeno_IVa2 PF02456.15 AID29631.1 - 0.069 11.9 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_33 PF13671.6 AID29631.1 - 0.079 13.1 0.1 0.24 11.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID29631.1 - 0.094 13.0 0.1 1.4 9.2 0.0 2.6 2 1 0 3 3 3 0 AAA domain AAA_5 PF07728.14 AID29631.1 - 0.096 12.7 0.0 0.28 11.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 AID29631.1 - 0.12 12.8 0.0 0.17 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID29631.1 - 0.14 12.4 0.2 0.88 9.9 0.2 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 AID29631.1 - 0.23 11.9 0.0 0.37 11.2 0.0 1.3 1 0 0 1 1 1 0 RNA helicase NMT1 PF09084.11 AID29632.1 - 3.7e-56 190.5 0.0 4.6e-56 190.2 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like TAT_signal PF10518.9 AID29632.1 - 0.0012 18.6 0.9 0.0028 17.4 0.9 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence SBP_bac_3 PF00497.20 AID29632.1 - 0.0079 15.6 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Glyoxalase PF00903.25 AID29633.1 - 9.3e-16 58.2 0.0 1.3e-15 57.7 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID29633.1 - 0.00019 21.4 0.0 0.00034 20.5 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID29633.1 - 0.00077 19.7 0.1 0.0013 18.9 0.1 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID29633.1 - 0.028 14.5 0.0 0.97 9.5 0.0 2.1 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID29633.1 - 0.057 14.2 0.2 0.069 13.9 0.2 1.1 1 0 0 1 1 1 0 Glyoxalase-like domain FCD PF07729.12 AID29634.1 - 4.4e-25 88.5 6.3 4.4e-25 88.5 6.3 1.5 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID29634.1 - 3e-22 78.0 0.1 1.6e-20 72.5 0.1 2.8 2 1 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 AID29634.1 - 2.6e-05 24.1 0.0 6.1e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 AID29634.1 - 5.7e-05 23.4 0.0 0.00011 22.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 AID29634.1 - 6.9e-05 22.7 0.0 0.00019 21.3 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_41 PF14502.6 AID29634.1 - 0.0016 18.1 0.0 0.0029 17.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AID29634.1 - 0.0019 18.0 0.0 0.024 14.5 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 AID29634.1 - 0.0086 15.9 0.0 0.023 14.6 0.0 1.7 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_24 PF13412.6 AID29634.1 - 0.0093 15.5 0.0 0.04 13.5 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding PaaX PF07848.12 AID29634.1 - 0.12 12.6 0.0 0.35 11.1 0.0 1.9 1 0 0 1 1 1 0 PaaX-like protein FAD-oxidase_C PF02913.19 AID29635.1 - 5.3e-38 131.1 0.0 7.4e-38 130.6 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 AID29635.1 - 9.3e-30 103.2 1.3 2.2e-29 102.0 1.3 1.6 1 0 0 1 1 1 1 FAD binding domain Thiolase_C PF02803.18 AID29635.1 - 5.5 6.7 8.6 1.3 8.7 0.1 2.6 2 1 0 2 2 2 0 Thiolase, C-terminal domain Peptidase_M23 PF01551.22 AID29636.1 - 2.7e-29 101.2 0.7 4.6e-29 100.5 0.7 1.4 1 0 0 1 1 1 1 Peptidase family M23 Tup_N PF08581.10 AID29636.1 - 0.69 10.3 0.1 0.69 10.3 0.1 2.8 2 1 1 3 3 3 0 Tup N-terminal FA_hydroxylase PF04116.13 AID29639.1 - 3.3e-22 79.2 12.4 5.7e-22 78.5 12.4 1.4 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily Acetyltransf_6 PF13480.7 AID29640.1 - 3.1e-35 121.4 6.9 2e-32 112.3 0.5 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Mig-14 PF07395.11 AID29640.1 - 0.00039 19.9 0.0 0.00057 19.4 0.0 1.2 1 0 0 1 1 1 1 Mig-14 Glycos_transf_1 PF00534.20 AID29640.1 - 0.02 14.4 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 ATE_C PF04377.15 AID29640.1 - 0.067 13.8 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus AhpC-TSA PF00578.21 AID29641.1 - 8.3e-34 116.2 0.0 9.4e-34 116.0 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 AID29641.1 - 6.7e-17 61.6 0.0 7.7e-17 61.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 AID29641.1 - 0.01 16.0 0.0 0.017 15.2 0.0 1.4 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme DUF1134 PF06577.12 AID29641.1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1134) DUF3971 PF13116.6 AID29642.1 - 5.6e-07 29.4 0.0 7.9e-06 25.6 0.0 2.6 2 1 1 3 3 3 1 Protein of unknown function AsmA_1 PF13109.6 AID29642.1 - 0.0058 16.1 0.0 0.013 15.0 0.0 1.5 1 0 0 1 1 1 1 AsmA-like C-terminal region tRNA-synt_1b PF00579.25 AID29643.1 - 5.6e-74 249.1 0.0 7e-74 248.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 AID29643.1 - 1.9e-05 24.3 0.2 7.4e-05 22.4 0.1 2.0 2 0 0 2 2 2 1 S4 domain S4_2 PF13275.6 AID29643.1 - 0.062 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 S4 domain TyrRSs_C PF16714.5 AID29643.1 - 0.064 13.1 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain Glycos_transf_2 PF00535.26 AID29644.1 - 1.7e-21 76.7 0.0 2.5e-21 76.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID29644.1 - 6.4e-12 45.9 0.0 7.2e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID29644.1 - 0.00014 22.3 0.0 0.00035 21.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 AID29644.1 - 0.00023 20.7 0.0 0.00033 20.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 LAB_N PF07578.11 AID29645.1 - 2.3e-33 114.1 6.1 3.2e-33 113.6 6.1 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain MtN3_slv PF03083.16 AID29645.1 - 0.0078 16.2 1.5 0.013 15.5 1.5 1.4 1 1 0 1 1 1 1 Sugar efflux transporter for intercellular exchange PMT_2 PF13231.6 AID29646.1 - 6.2e-11 42.8 14.4 6.2e-11 42.8 14.4 2.7 2 1 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PAP2 PF01569.21 AID29647.1 - 1.2e-21 76.9 8.6 1.8e-21 76.4 8.6 1.3 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 AID29647.1 - 9.1e-06 25.5 10.7 1.6e-05 24.7 10.7 1.5 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 AID29647.1 - 0.22 12.1 2.6 0.26 11.8 0.4 2.0 2 0 0 2 2 2 0 PAP2 superfamily C-terminal DUF543 PF04418.12 AID29647.1 - 0.27 11.2 1.7 4.5 7.3 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF543) FMN_bind_2 PF04299.12 AID29648.1 - 1.1e-61 207.4 0.0 1.4e-61 207.1 0.0 1.1 1 0 0 1 1 1 1 Putative FMN-binding domain Hydrolase_4 PF12146.8 AID29649.1 - 4.7e-12 45.7 0.1 3.6e-08 33.0 0.0 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID29649.1 - 4.5e-09 36.1 0.1 0.0005 19.6 0.0 2.1 1 1 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 AID29649.1 - 1e-08 35.1 0.4 1.8e-07 31.1 0.1 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29649.1 - 1.4e-06 29.1 0.1 9.6e-05 23.1 0.0 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family DLH PF01738.18 AID29649.1 - 2.7e-06 27.1 0.0 3.6e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 AID29649.1 - 9.2e-06 25.4 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_5 PF12695.7 AID29649.1 - 0.0072 16.1 0.0 0.01 15.6 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase_phd PF10503.9 AID29649.1 - 0.045 13.2 0.0 0.19 11.2 0.0 1.8 2 0 0 2 2 2 0 Esterase PHB depolymerase DUF3141 PF11339.8 AID29649.1 - 0.12 10.8 0.0 0.19 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Phage_TAC_14 PF16462.5 AID29649.1 - 0.19 11.9 0.0 0.31 11.3 0.0 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Aminotran_5 PF00266.19 AID29650.1 - 3.3e-50 171.1 0.1 4.1e-50 170.8 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 AID29650.1 - 0.00059 19.1 0.0 0.0014 17.9 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II UPF0051 PF01458.17 AID29651.1 - 1.8e-66 224.0 0.1 2.4e-66 223.6 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) CHIPS PF11434.8 AID29651.1 - 0.0029 17.4 0.0 0.0086 15.9 0.0 1.8 1 0 0 1 1 1 1 Chemotaxis-inhibiting protein CHIPS ABC_tran PF00005.27 AID29652.1 - 6.6e-21 75.3 0.0 8.9e-21 74.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID29652.1 - 7.9e-08 32.0 0.3 1.9e-06 27.5 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID29652.1 - 2e-05 24.6 0.0 0.0051 16.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 AID29652.1 - 0.0012 19.4 0.0 0.0026 18.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID29652.1 - 0.0013 18.4 0.1 0.0026 17.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Cytidylate_kin PF02224.18 AID29652.1 - 0.0037 17.0 0.0 0.0056 16.4 0.0 1.4 1 0 0 1 1 1 1 Cytidylate kinase AAA_33 PF13671.6 AID29652.1 - 0.015 15.4 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 AID29652.1 - 0.016 13.9 0.0 0.021 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID29652.1 - 0.023 14.6 0.0 0.037 13.9 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 AID29652.1 - 0.036 14.6 0.0 0.06 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID29652.1 - 0.038 13.6 0.0 0.081 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID29652.1 - 0.13 12.5 0.0 0.75 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain UPF0051 PF01458.17 AID29653.1 - 4.4e-66 222.7 0.8 5.5e-66 222.4 0.8 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Aminotran_5 PF00266.19 AID29654.1 - 6.6e-147 489.3 0.0 7.5e-147 489.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 AID29654.1 - 6.4e-08 32.1 0.0 1.6e-07 30.8 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 AID29654.1 - 7.3e-07 28.8 0.1 8.1e-07 28.6 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 AID29654.1 - 7.7e-07 28.0 0.0 1.3e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 AID29654.1 - 4.7e-06 26.1 0.1 7.3e-06 25.5 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SelA PF03841.13 AID29654.1 - 0.14 11.1 0.1 0.47 9.4 0.0 1.9 2 1 0 2 2 2 0 L-seryl-tRNA selenium transferase FeS_assembly_P PF01883.19 AID29655.1 - 4.3e-23 81.3 0.1 6.5e-23 80.7 0.1 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Fe-S_biosyn PF01521.20 AID29656.1 - 2.9e-20 72.5 0.0 3.3e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis GFA PF04828.14 AID29657.1 - 1.2e-07 32.0 0.2 2.4e-07 31.0 0.2 1.5 1 1 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme PHD_Oberon PF07227.11 AID29657.1 - 0.61 10.0 4.1 1.2 9.0 0.1 2.1 2 0 0 2 2 2 0 PHD - plant homeodomain finger protein TfoX_N PF04993.13 AID29658.1 - 3.8e-31 107.2 0.0 4.2e-31 107.0 0.0 1.0 1 0 0 1 1 1 1 TfoX N-terminal domain Indigoidine_A PF04227.12 AID29659.1 - 2.9e-124 414.1 2.5 3.3e-124 414.0 2.5 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein PfkB PF00294.24 AID29660.1 - 2e-27 96.3 1.1 2.3e-27 96.1 1.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RecA PF00154.21 AID29662.1 - 1.1e-147 490.6 0.7 1.3e-147 490.3 0.7 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 AID29662.1 - 2.7e-10 39.9 0.1 6.9e-10 38.6 0.1 1.6 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 AID29662.1 - 7.3e-10 38.6 0.4 1.6e-08 34.2 0.4 2.6 1 1 0 1 1 1 1 KaiC ATPase_2 PF01637.18 AID29662.1 - 6.9e-05 22.9 0.0 0.00012 22.0 0.0 1.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 AID29662.1 - 7.3e-05 23.2 0.1 0.00014 22.3 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 AID29662.1 - 0.00012 21.8 0.0 0.00023 20.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 AID29662.1 - 0.0033 17.0 0.2 0.037 13.6 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID29662.1 - 0.053 13.8 0.1 0.13 12.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain CobU PF02283.16 AID29662.1 - 0.054 13.1 0.0 0.097 12.2 0.0 1.4 1 1 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DnaB_C PF03796.15 AID29662.1 - 0.093 12.0 0.0 0.3 10.4 0.0 1.6 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_35 PF14516.6 AID29662.1 - 0.11 11.3 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA PF00004.29 AID29662.1 - 0.14 12.6 0.0 0.34 11.3 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) tRNA-synt_2c PF01411.19 AID29663.1 - 3.1e-217 722.5 0.0 3.8e-217 722.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 AID29663.1 - 2.5e-22 79.8 4.8 5.8e-22 78.6 4.8 1.7 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 AID29663.1 - 1.1e-16 60.7 0.2 3.3e-16 59.1 0.2 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DUF1421 PF07223.11 AID29663.1 - 0.044 13.6 0.0 0.78 9.6 0.0 2.7 2 0 0 2 2 2 0 UBA-like domain (DUF1421) DoxX_3 PF13781.6 AID29664.1 - 7.8e-23 81.1 11.2 7.8e-23 81.1 11.2 2.4 2 0 0 2 2 2 1 DoxX-like family NAD_binding_10 PF13460.6 AID29664.1 - 6.6e-21 75.0 0.7 1.3e-20 74.1 0.7 1.5 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID29664.1 - 7.3e-09 35.4 0.1 1.3e-08 34.6 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 AID29664.1 - 2.2e-05 24.2 0.1 8.7e-05 22.2 0.1 1.8 1 1 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 AID29664.1 - 0.0018 17.5 0.1 0.089 11.9 0.1 2.2 2 0 0 2 2 2 1 RmlD substrate binding domain COX14 PF14880.6 AID29664.1 - 0.14 12.0 0.0 0.37 10.7 0.0 1.6 1 0 0 1 1 1 0 Cytochrome oxidase c assembly NAD_binding_4 PF07993.12 AID29664.1 - 0.15 11.2 0.1 2.1 7.5 0.0 2.4 1 1 2 3 3 3 0 Male sterility protein 3Beta_HSD PF01073.19 AID29664.1 - 0.18 10.8 0.0 0.29 10.1 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family DUF2269 PF10027.9 AID29665.1 - 9.3e-59 197.8 12.4 1e-58 197.6 12.4 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2269) DUF3464 PF11947.8 AID29665.1 - 0.83 9.4 3.0 8.6 6.1 0.0 2.4 3 0 0 3 3 3 0 Photosynthesis affected mutant 68 GST_N PF02798.20 AID29666.1 - 2e-16 60.1 0.0 3.5e-16 59.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 AID29666.1 - 4e-16 59.2 0.0 7e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID29666.1 - 8.5e-12 45.1 0.0 1.3e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID29666.1 - 9.3e-09 35.5 0.0 1.8e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID29666.1 - 1.5e-08 34.5 0.3 3.2e-08 33.5 0.3 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID29666.1 - 3.4e-08 33.6 0.0 5.5e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain MetRS-N PF09635.10 AID29666.1 - 0.087 13.4 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 MetRS-N binding domain Iso_dh PF00180.20 AID29668.1 - 9.2e-76 255.2 0.0 1.1e-75 255.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Phe_ZIP PF08916.11 AID29668.1 - 0.059 14.1 0.4 0.17 12.6 0.1 1.9 2 0 0 2 2 2 0 Phenylalanine zipper Beta_helix PF13229.6 AID29669.1 - 7.4e-05 22.7 20.9 0.00017 21.5 13.5 2.7 1 1 1 2 2 2 2 Right handed beta helix region DUF4957 PF16318.5 AID29669.1 - 0.0028 17.6 2.8 0.14 12.1 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4957) SpoU_methylase PF00588.19 AID29670.1 - 3e-30 105.2 0.0 3.9e-30 104.9 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Asp_Glu_race PF01177.22 AID29671.1 - 2.2e-19 70.2 0.0 2.6e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase TIP39 PF14980.6 AID29671.1 - 0.27 11.2 1.0 2.9 7.9 0.3 2.4 2 0 0 2 2 2 0 TIP39 peptide RNB PF00773.19 AID29672.1 - 1.1e-37 130.2 0.0 3.8e-37 128.4 0.0 1.7 1 1 0 1 1 1 1 RNB domain RNase_II_C_S1 PF18614.1 AID29672.1 - 7.4e-16 57.9 3.4 2e-15 56.4 3.4 1.8 1 0 0 1 1 1 1 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 AID29672.1 - 0.0085 16.4 0.3 0.031 14.6 0.3 1.9 1 1 0 1 1 1 1 S1 RNA binding domain OAM_dimer PF16554.5 AID29672.1 - 0.035 14.5 0.5 0.21 12.1 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain of d-ornithine 4,5-aminomutase DUF3008 PF11450.8 AID29673.1 - 1.1e-30 105.6 11.7 1.2e-30 105.4 11.7 1.0 1 0 0 1 1 1 1 Protein of unknwon function (DUF3008) MmgE_PrpD PF03972.14 AID29673.1 - 0.042 12.4 0.2 0.046 12.3 0.2 1.0 1 0 0 1 1 1 0 MmgE/PrpD family LPAM_1 PF08139.12 AID29675.1 - 0.29 11.7 2.7 0.5 11.0 2.7 1.4 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Ribosomal_S4 PF00163.19 AID29676.1 - 2.6e-24 85.9 3.1 4.1e-24 85.3 3.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 AID29676.1 - 8.1e-18 63.9 0.1 1.5e-17 63.0 0.1 1.5 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 AID29676.1 - 0.00052 19.8 0.2 0.0011 18.7 0.2 1.6 1 0 0 1 1 1 1 S4 domain ATP_bind_3 PF01171.20 AID29677.1 - 2.9e-14 53.2 0.0 6.2e-14 52.2 0.0 1.6 2 0 0 2 2 2 1 PP-loop family Inositol_P PF00459.25 AID29678.1 - 1.5e-39 136.1 0.0 2e-39 135.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 AID29678.1 - 0.0012 18.4 0.0 0.0017 17.9 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Adeno_E3_CR1 PF02440.15 AID29678.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 DUF2844 PF11005.8 AID29678.1 - 0.12 12.3 0.3 1.8 8.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2844) MFS_1 PF07690.16 AID29680.1 - 1.4e-34 119.6 51.2 1.4e-34 119.6 51.2 1.3 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID29680.1 - 4.2e-08 32.5 13.4 4.2e-08 32.5 13.4 3.3 1 1 2 3 3 3 1 Sugar (and other) transporter TRI12 PF06609.13 AID29680.1 - 5.8e-06 25.0 7.1 5.8e-06 25.0 7.1 1.4 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Glutaredoxin PF00462.24 AID29681.1 - 2e-18 66.3 0.0 2.8e-18 65.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin BolA PF01722.18 AID29682.1 - 5.8e-15 55.3 0.0 5.9e-15 55.3 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein SnoaL PF07366.12 AID29682.1 - 0.1 12.4 0.0 0.19 11.6 0.0 1.4 1 1 0 1 1 1 0 SnoaL-like polyketide cyclase TFA2_Winged_2 PF18121.1 AID29682.1 - 0.17 11.6 0.0 0.24 11.1 0.0 1.4 1 1 0 1 1 1 0 TFA2 Winged helix domain 2 AIRS_C PF02769.22 AID29684.1 - 1.5e-55 187.6 3.1 2.7e-33 115.3 0.5 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 AID29684.1 - 4.9e-47 158.5 3.5 8.8e-23 80.8 0.9 2.8 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 AID29684.1 - 8.2e-12 45.5 0.0 1.9e-11 44.3 0.0 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain DUF2099 PF09872.9 AID29684.1 - 0.0017 17.6 0.3 0.0037 16.5 0.3 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Aminotran_1_2 PF00155.21 AID29685.1 - 9.4e-18 64.5 0.0 1.2e-17 64.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID29685.1 - 4.3e-12 45.5 0.1 1.1e-11 44.1 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID29685.1 - 0.0037 17.2 0.1 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Cys_Met_Meta_PP PF01053.20 AID29685.1 - 0.02 13.5 0.0 0.028 12.9 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DUF1418 PF07214.12 AID29686.1 - 0.32 10.9 1.9 0.75 9.7 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) DUF4995 PF16386.5 AID29687.1 - 0.0067 16.4 0.9 0.014 15.3 0.9 1.6 1 1 1 2 2 2 1 Domain of unknown function GST_N_3 PF13417.6 AID29688.1 - 1.7e-16 60.4 0.1 3.6e-16 59.3 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID29688.1 - 5.3e-09 36.0 0.7 1.2e-08 34.9 0.7 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID29688.1 - 8.5e-08 32.4 0.0 1.7e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID29688.1 - 1.1e-07 32.1 0.0 2.6e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID29688.1 - 0.00044 20.4 0.0 0.00066 19.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID29688.1 - 0.019 15.2 0.1 0.037 14.2 0.0 1.5 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 AID29688.1 - 0.034 14.9 0.0 0.07 13.9 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GST_C_5 PF16865.5 AID29688.1 - 0.061 13.9 0.0 0.085 13.4 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GATase_5 PF13507.6 AID29689.1 - 1.2e-37 129.4 0.0 1.7e-37 128.9 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 AID29689.1 - 1.5e-06 28.0 0.0 4.4e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 AID29689.1 - 3.4e-06 27.0 0.0 4.5e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 AID29689.1 - 0.0011 18.7 0.1 0.0017 18.2 0.1 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 AID29689.1 - 0.18 11.6 0.0 0.41 10.5 0.0 1.8 1 1 0 1 1 1 0 SNO glutamine amidotransferase family CCDC-167 PF15188.6 AID29690.1 - 0.0034 17.7 0.1 0.0041 17.4 0.1 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 167 PurS PF02700.14 AID29691.1 - 5.4e-32 109.8 0.0 5.9e-32 109.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase SAICAR_synt PF01259.18 AID29692.1 - 5.8e-62 209.6 0.0 6.6e-62 209.4 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF1476 PF07345.11 AID29693.1 - 6.9e-42 142.0 6.4 7.7e-42 141.8 6.4 1.0 1 0 0 1 1 1 1 ATPase inhibitor subunit zeta HpcH_HpaI PF03328.14 AID29694.1 - 7.9e-23 80.7 0.0 1e-22 80.4 0.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family Acyl_transf_3 PF01757.22 AID29695.1 - 4.9e-25 88.3 30.4 6.1e-25 88.0 30.4 1.1 1 0 0 1 1 1 1 Acyltransferase family Ser_hydrolase PF06821.13 AID29696.1 - 9.5e-70 233.9 0.1 1.1e-69 233.7 0.1 1.0 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 AID29696.1 - 0.0003 21.5 2.9 0.00041 21.0 2.9 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29696.1 - 0.0039 16.5 0.0 0.0073 15.6 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID29696.1 - 0.018 14.7 0.0 2.2 7.9 0.0 2.3 1 1 1 2 2 2 0 alpha/beta hydrolase fold Glyoxalase PF00903.25 AID29697.1 - 2.3e-12 47.2 0.0 2.7e-07 30.8 0.0 2.2 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29697.1 - 0.0081 16.9 1.1 0.17 12.7 0.0 2.9 2 2 0 2 2 2 1 Glyoxalase-like domain TPR_4 PF07721.14 AID29697.1 - 0.016 15.8 0.1 0.072 13.8 0.1 2.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Lyase_1 PF00206.20 AID29698.1 - 4.7e-51 174.0 0.0 6.8e-51 173.5 0.0 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 AID29698.1 - 1.7e-28 99.0 0.6 6e-28 97.2 0.2 2.1 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus T2SSK PF03934.13 AID29698.1 - 0.054 12.9 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein K ASL_C PF08328.11 AID29698.1 - 0.059 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal DUF2259 PF10016.9 AID29700.1 - 1.5e-62 210.9 0.0 1.7e-62 210.7 0.0 1.0 1 0 0 1 1 1 1 Predicted secreted protein (DUF2259) DUF2171 PF09939.9 AID29701.1 - 3e-29 101.1 3.9 3.4e-29 100.9 3.9 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2171) PRC PF05239.16 AID29701.1 - 0.022 14.8 0.1 0.031 14.4 0.1 1.3 1 0 0 1 1 1 0 PRC-barrel domain Peptidase_S58 PF03576.14 AID29702.1 - 1.5e-65 221.7 5.3 1.8e-65 221.4 5.3 1.0 1 0 0 1 1 1 1 Peptidase family S58 Flavin_Reduct PF01613.18 AID29703.1 - 1.1e-27 96.9 0.0 1.3e-27 96.8 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Peripla_BP_6 PF13458.6 AID29704.1 - 3e-28 99.5 9.3 3.5e-28 99.2 9.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID29704.1 - 2.3e-13 50.0 0.0 1.9e-10 40.4 0.0 2.0 2 0 0 2 2 2 2 Receptor family ligand binding region LppC PF04348.13 AID29704.1 - 0.034 13.0 0.5 0.041 12.7 0.5 1.1 1 0 0 1 1 1 0 LppC putative lipoprotein DUF116 PF01976.17 AID29704.1 - 0.21 11.1 0.0 0.32 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF116 AAA_5 PF07728.14 AID29705.1 - 2.7e-12 46.9 0.0 4.7e-12 46.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 AID29705.1 - 6.5e-10 39.5 0.0 2.4e-09 37.7 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 AID29705.1 - 2.3e-07 30.7 0.0 0.014 15.3 0.0 2.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_6 PF12774.7 AID29705.1 - 2e-05 23.7 0.0 2.9e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_16 PF13191.6 AID29705.1 - 8.2e-05 23.0 0.4 0.00081 19.8 0.4 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID29705.1 - 0.00037 20.8 0.0 0.00073 19.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 AID29705.1 - 0.0012 18.7 0.0 0.91 9.2 0.0 2.2 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 AID29705.1 - 0.0013 18.7 0.1 0.0096 15.8 0.1 2.1 1 1 0 1 1 1 1 NACHT domain RNA_helicase PF00910.22 AID29705.1 - 0.0015 18.9 0.0 0.017 15.5 0.0 2.1 1 1 0 1 1 1 1 RNA helicase AAA_2 PF07724.14 AID29705.1 - 0.0085 16.2 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) TsaE PF02367.17 AID29705.1 - 0.011 15.7 0.0 0.02 14.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 AID29705.1 - 0.016 15.7 0.0 0.04 14.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 AID29705.1 - 0.025 14.3 0.0 0.71 9.6 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 AID29705.1 - 0.028 14.5 0.0 0.22 11.6 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.15 AID29705.1 - 0.059 13.3 0.1 0.19 11.6 0.1 1.9 1 1 0 1 1 1 0 NTPase AAA_30 PF13604.6 AID29705.1 - 0.12 12.1 0.1 0.21 11.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID29705.1 - 0.21 11.1 0.0 0.34 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region VWA_CoxE PF05762.14 AID29706.1 - 2.3e-86 288.8 3.5 4.1e-86 288.0 3.5 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 AID29706.1 - 7.9e-05 23.3 0.0 0.00018 22.1 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 AID29706.1 - 0.021 14.8 0.0 0.062 13.2 0.0 1.8 2 0 0 2 2 2 0 von Willebrand factor type A domain XdhC_CoxI PF02625.16 AID29707.1 - 1.7e-24 85.7 0.2 2.4e-24 85.3 0.2 1.2 1 0 0 1 1 1 1 XdhC and CoxI family SecA_DEAD PF07517.14 AID29707.1 - 0.19 11.0 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 SecA DEAD-like domain XdhC_C PF13478.6 AID29708.1 - 1e-40 139.1 0.7 1.3e-40 138.7 0.7 1.2 1 0 0 1 1 1 1 XdhC Rossmann domain NTP_transf_3 PF12804.7 AID29709.1 - 5.3e-39 134.2 1.2 1.7e-38 132.5 1.2 1.9 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 AID29709.1 - 2.8e-06 27.4 0.0 4.1e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 AID29709.1 - 4.8e-05 23.2 0.0 0.00011 22.0 0.0 1.6 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MoCF_biosynth PF00994.24 AID29709.1 - 6.2e-05 22.7 0.1 0.00017 21.3 0.1 1.7 1 0 0 1 1 1 1 Probable molybdopterin binding domain Hydrolase_4 PF12146.8 AID29710.1 - 2.2e-08 33.7 0.0 7.7e-05 22.1 0.0 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID29710.1 - 3.4e-05 24.6 1.3 6.5e-05 23.6 1.3 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID29710.1 - 0.0025 17.5 0.0 0.0036 17.0 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.7 AID29710.1 - 0.032 14.0 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF1176 PF06674.11 AID29711.1 - 3.6e-11 43.1 0.3 6.3e-11 42.3 0.3 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1176) DUF1993 PF09351.10 AID29712.1 - 5.5e-59 198.9 0.1 6.1e-59 198.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1993) DUF1127 PF06568.11 AID29713.1 - 0.00044 19.9 0.1 0.00071 19.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) DUF2732 PF10809.8 AID29714.1 - 0.068 13.0 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2732) Aldo_ket_red PF00248.21 AID29716.1 - 1.6e-64 218.0 0.0 1.8e-64 217.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Aminotran_5 PF00266.19 AID29717.1 - 5e-69 233.0 0.0 1.2e-67 228.5 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AID29717.1 - 1.9e-07 30.0 0.0 2.9e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID29717.1 - 0.00014 21.1 0.0 0.00025 20.3 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID29717.1 - 0.0019 17.6 0.0 0.0059 16.0 0.0 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Hist_deacetyl PF00850.19 AID29718.1 - 2.1e-69 234.4 0.0 2.5e-69 234.1 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Acetyltransf_1 PF00583.25 AID29719.1 - 1.5e-14 54.2 0.1 2e-14 53.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID29719.1 - 5.5e-11 42.5 0.0 7.4e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID29719.1 - 2.2e-08 34.4 0.1 5.8e-08 33.0 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID29719.1 - 1.5e-05 24.9 0.0 9e-05 22.4 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_3 PF13302.7 AID29719.1 - 0.01 16.5 0.0 0.016 15.9 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID29719.1 - 0.043 13.9 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase BKACE PF05853.12 AID29720.1 - 5.3e-102 340.8 0.0 6e-102 340.6 0.0 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme Aminotran_3 PF00202.21 AID29721.1 - 2.2e-95 319.7 0.0 2.7e-95 319.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III ABC_transp_aux PF09822.9 AID29722.1 - 0.0046 16.5 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 ABC-type uncharacterized transport system MG2 PF01835.19 AID29722.1 - 0.012 16.1 0.0 0.043 14.3 0.0 2.0 1 1 0 1 1 1 0 MG2 domain ParBc PF02195.18 AID29723.1 - 1.4e-12 47.7 0.2 1.5e-12 47.6 0.2 1.0 1 0 0 1 1 1 1 ParB-like nuclease domain Phage_CI_C PF16452.5 AID29723.1 - 0.036 14.4 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor C-terminal domain AHSA1 PF08327.11 AID29724.1 - 6.9e-35 120.0 0.6 7.9e-35 119.8 0.6 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Abhydrolase_1 PF00561.20 AID29725.1 - 2.7e-22 79.7 0.1 4.4e-21 75.7 0.1 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29725.1 - 3.3e-16 60.6 0.6 4.1e-16 60.2 0.6 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29725.1 - 6e-13 48.6 0.2 2.2e-11 43.5 0.2 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 AID29725.1 - 2e-08 34.7 0.0 2.5e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Ndr PF03096.14 AID29725.1 - 2.9e-07 29.5 0.0 4.9e-07 28.7 0.0 1.3 1 1 0 1 1 1 1 Ndr family BAAT_C PF08840.11 AID29725.1 - 0.022 14.7 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 AID29725.1 - 0.037 13.6 0.0 0.41 10.2 0.0 2.1 2 0 0 2 2 2 0 Dienelactone hydrolase family FSH1 PF03959.13 AID29725.1 - 0.096 12.3 0.0 0.24 11.0 0.0 1.6 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 AID29725.1 - 0.12 12.2 0.0 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 Alpha/beta hydrolase family Esterase PF00756.20 AID29725.1 - 0.14 11.7 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 Putative esterase 2OG-FeII_Oxy PF03171.20 AID29726.1 - 6.7e-17 61.8 0.0 1e-16 61.3 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 AID29726.1 - 0.0085 16.8 0.0 0.014 16.1 0.0 1.3 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal GFA PF04828.14 AID29728.1 - 1.1e-21 77.0 0.0 1.4e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Rpr2 PF04032.16 AID29728.1 - 0.071 13.4 0.2 0.24 11.7 0.0 1.8 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain RNA_POL_M_15KD PF02150.16 AID29728.1 - 0.082 12.8 0.8 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit NOB1_Zn_bind PF08772.11 AID29728.1 - 0.095 12.9 2.2 0.19 11.9 2.2 1.6 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Prok-RING_4 PF14447.6 AID29729.1 - 0.032 14.1 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 BacA PF02673.18 AID29731.1 - 5e-69 232.9 13.9 5.8e-69 232.6 13.9 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA DUF5493 PF17597.2 AID29731.1 - 0.018 15.3 1.2 0.054 13.7 0.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5493) Pox_A14 PF05767.12 AID29731.1 - 3.8 7.7 5.0 2.7 8.2 0.3 2.5 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 Peptidase_C93 PF06035.11 AID29732.1 - 8.2e-68 227.3 0.0 9.8e-68 227.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial transglutaminase-like cysteine proteinase BTLCP NAGPA PF09992.9 AID29733.1 - 1.9e-22 80.2 0.1 2.6e-22 79.8 0.1 1.1 1 0 0 1 1 1 1 Phosphodiester glycosidase SNARE_assoc PF09335.11 AID29734.1 - 4.3e-20 72.4 8.7 4.3e-20 72.4 8.7 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein Toxin_28 PF08115.11 AID29734.1 - 0.15 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 SFI toxin family FTR1 PF03239.14 AID29734.1 - 4.4 6.4 10.3 5.7 6.0 2.6 2.5 2 1 0 2 2 2 0 Iron permease FTR1 family DUF1402 PF07182.11 AID29735.1 - 1.4e-153 510.3 0.0 1.7e-153 510.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1402) Peptidase_S66 PF02016.15 AID29735.1 - 0.13 12.4 0.0 0.37 10.9 0.0 1.7 2 0 0 2 2 2 0 LD-carboxypeptidase N-terminal domain Glyco_hydro_25 PF01183.20 AID29736.1 - 2.7e-58 197.1 0.0 3.4e-58 196.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Glyoxalase PF00903.25 AID29739.1 - 1.3e-10 41.6 0.0 1.9e-10 41.0 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29739.1 - 0.0062 17.3 0.0 0.0088 16.8 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain HTH_1 PF00126.27 AID29740.1 - 2.1e-23 82.1 1.5 3.5e-23 81.3 1.5 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID29740.1 - 7.8e-22 77.7 0.0 1.2e-21 77.1 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_20 PF12840.7 AID29740.1 - 0.0016 18.5 0.1 0.0049 16.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 AID29740.1 - 0.043 13.7 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID29740.1 - 0.068 13.1 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 AID29740.1 - 0.15 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Methyltransf_23 PF13489.6 AID29742.1 - 2.3e-08 34.1 0.0 6.4e-08 32.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID29742.1 - 2.9e-08 34.3 0.2 6.9e-08 33.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29742.1 - 6.3e-07 30.0 0.1 1.2e-06 29.0 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID29742.1 - 1.3e-06 29.0 0.1 3.6e-06 27.6 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 AID29742.1 - 0.0057 16.1 0.0 0.0084 15.5 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB CheR PF01739.18 AID29742.1 - 0.0065 16.0 0.0 0.011 15.2 0.0 1.5 1 1 0 1 1 1 1 CheR methyltransferase, SAM binding domain PCMT PF01135.19 AID29742.1 - 0.01 15.6 0.0 0.22 11.2 0.0 2.1 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AID29742.1 - 0.01 15.7 0.0 0.33 10.7 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain DUF938 PF06080.12 AID29742.1 - 0.11 12.2 0.0 0.73 9.6 0.0 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF938) DUF3592 PF12158.8 AID29743.1 - 2e-32 112.3 6.8 2.2e-15 57.0 0.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3592) Mu-transpos_C PF09299.11 AID29743.1 - 0.0045 16.9 0.0 4.6 7.3 0.0 2.6 2 1 0 2 2 2 2 Mu transposase, C-terminal PMP1_2 PF08114.11 AID29743.1 - 2.9 7.7 5.3 0.3 10.8 0.2 2.1 2 0 0 2 2 2 0 ATPase proteolipid family Acyl_transf_3 PF01757.22 AID29745.1 - 1.4e-22 80.2 42.8 1.6e-22 80.0 42.8 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.12 AID29745.1 - 0.0079 15.8 22.7 0.047 13.2 20.4 2.8 1 1 1 2 2 2 1 Protein of unknown function (DUF1624) Form-deh_trans PF09163.11 AID29745.1 - 0.15 11.9 0.0 0.15 11.9 0.0 3.3 3 0 0 3 3 3 0 Formate dehydrogenase N, transmembrane Ribonuc_red_lgC PF02867.15 AID29746.1 - 1.1e-123 413.6 0.0 6.9e-106 354.8 0.0 2.4 2 0 0 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_2_N PF08471.10 AID29746.1 - 2e-42 143.4 0.1 5.3e-42 142.0 0.1 1.8 1 0 0 1 1 1 1 Class II vitamin B12-dependent ribonucleotide reductase Transcrip_reg PF01709.20 AID29746.1 - 4.3e-05 23.1 0.6 0.0038 16.7 0.1 2.4 2 0 0 2 2 2 2 Transcriptional regulator Ribonuc_red_lgN PF00317.21 AID29746.1 - 0.0087 16.0 0.0 0.024 14.6 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain GrpE PF01025.19 AID29746.1 - 0.04 13.6 0.1 0.04 13.6 0.1 2.2 2 0 0 2 2 2 0 GrpE Acetyltransf_11 PF13720.6 AID29746.1 - 0.058 13.9 0.0 0.46 11.0 0.0 2.6 2 0 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PilZ PF07238.14 AID29747.1 - 3.8e-05 23.9 0.0 4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 PilZ domain NUDIX PF00293.28 AID29748.1 - 8.1e-08 32.4 0.2 1e-07 32.0 0.2 1.1 1 0 0 1 1 1 1 NUDIX domain Pribosyltran PF00156.27 AID29749.1 - 1.1e-19 70.5 0.0 1.6e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PEP-utilizers PF00391.23 AID29749.1 - 0.15 11.8 0.9 0.28 10.9 0.4 1.8 1 1 1 2 2 2 0 PEP-utilising enzyme, mobile domain Usp PF00582.26 AID29750.1 - 1.2e-18 68.0 0.4 1.1e-08 35.7 0.2 2.7 2 1 0 2 2 2 2 Universal stress protein family MoCF_biosynth PF00994.24 AID29751.1 - 1.7e-32 112.1 0.2 2.3e-32 111.7 0.2 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain Abhydrolase_1 PF00561.20 AID29752.1 - 1.3e-20 74.1 0.0 2.8e-18 66.5 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29752.1 - 1e-15 58.9 7.8 1.4e-15 58.5 7.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29752.1 - 4.2e-14 52.4 0.1 3.1e-12 46.3 0.0 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Esterase PF00756.20 AID29752.1 - 0.0015 18.2 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Abhydrolase_2 PF02230.16 AID29752.1 - 0.0038 17.1 0.3 1.2 8.9 0.0 2.3 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 AID29752.1 - 0.004 16.9 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 AID29752.1 - 0.0045 16.9 0.0 0.0069 16.3 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase DUF1057 PF06342.12 AID29752.1 - 0.0069 15.5 0.0 0.0096 15.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) LIDHydrolase PF10230.9 AID29752.1 - 0.0087 15.6 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase PGAP1 PF07819.13 AID29752.1 - 0.047 13.4 0.1 0.79 9.4 0.0 2.1 2 0 0 2 2 2 0 PGAP1-like protein Lipase_3 PF01764.25 AID29752.1 - 0.082 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) DUF2798 PF11391.8 AID29752.1 - 0.15 12.1 3.0 0.21 11.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2798) DUF2188 PF09954.9 AID29754.1 - 2.9e-06 27.3 1.2 7.1e-06 26.1 1.2 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2188) DUF982 PF06169.12 AID29755.1 - 2.4e-24 85.1 0.1 2.8e-24 85.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) SH3_3 PF08239.11 AID29756.1 - 2.6e-13 50.1 0.1 3.6e-13 49.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_4 PF06347.13 AID29756.1 - 3e-07 30.1 0.1 3.7e-07 29.8 0.1 1.2 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_16 PF18348.1 AID29756.1 - 5.6e-05 22.8 0.0 7.9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial dipeptidyl-peptidase Sh3 domain Oxidored_FMN PF00724.20 AID29757.1 - 3e-70 237.2 0.0 3.5e-70 237.0 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 AID29757.1 - 0.0045 16.1 0.8 0.032 13.3 0.0 2.3 2 1 1 3 3 3 1 Dihydrouridine synthase (Dus) NUDIX PF00293.28 AID29758.1 - 5.9e-08 32.8 0.0 1e-07 32.0 0.0 1.4 1 1 0 1 1 1 1 NUDIX domain Lyase_aromatic PF00221.19 AID29763.1 - 7.6e-137 456.7 12.5 8.6e-137 456.6 12.5 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase OMP_b-brl PF13505.6 AID29764.1 - 3.9e-21 76.0 13.7 4.8e-21 75.7 13.7 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 AID29764.1 - 0.00048 19.9 2.3 0.00071 19.3 2.3 1.4 1 1 0 1 1 1 1 OmpA-like transmembrane domain Porin_2 PF02530.14 AID29764.1 - 0.00055 19.3 0.3 0.0008 18.8 0.2 1.4 1 1 0 1 1 1 1 Porin subfamily Opacity PF02462.15 AID29764.1 - 0.0091 16.1 0.5 0.022 14.9 0.5 1.9 1 1 0 1 1 1 1 Opacity family porin protein Channel_Tsx PF03502.13 AID29764.1 - 0.014 15.2 1.9 0.018 14.8 1.9 1.3 1 1 0 1 1 1 0 Nucleoside-specific channel-forming protein, Tsx BBP2_2 PF10082.9 AID29764.1 - 0.027 13.3 0.0 0.034 13.0 0.0 1.3 1 0 0 1 1 1 0 Putative beta-barrel porin 2 OMP_b-brl_2 PF13568.6 AID29764.1 - 0.11 12.5 2.8 0.34 10.9 0.2 2.2 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain OmpA_like PF16961.5 AID29764.1 - 0.14 11.8 3.4 0.92 9.1 0.8 2.4 1 1 1 2 2 2 0 Putative OmpA-OmpF-like porin family Adenine_deam_C PF13382.6 AID29766.1 - 2.5e-59 199.4 1.0 4.4e-59 198.6 1.0 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 AID29766.1 - 2.7e-24 86.1 1.5 3.2e-13 49.7 0.0 2.3 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 AID29766.1 - 1.2e-13 51.3 1.3 8.8e-06 25.4 0.1 2.4 2 0 0 2 2 2 2 Amidohydrolase family DUF900 PF05990.12 AID29767.1 - 7.5e-80 267.8 0.0 2.3e-79 266.2 0.0 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 AID29767.1 - 1.5e-05 25.7 0.1 2.4e-05 25.1 0.1 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Lipase_2 PF01674.18 AID29767.1 - 0.002 17.7 0.0 0.0032 17.0 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 2) LIDHydrolase PF10230.9 AID29767.1 - 0.075 12.6 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Ser_hydrolase PF06821.13 AID29767.1 - 0.077 12.8 0.0 0.24 11.2 0.0 1.8 2 0 0 2 2 2 0 Serine hydrolase DUF900 PF05990.12 AID29768.1 - 1.8e-80 269.8 0.0 2.7e-80 269.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 AID29768.1 - 1.1e-06 29.5 0.2 1.7e-06 28.8 0.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Lipase_2 PF01674.18 AID29768.1 - 0.0017 17.9 0.0 0.0026 17.3 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 2) LIDHydrolase PF10230.9 AID29768.1 - 0.054 13.0 0.0 0.078 12.5 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase LCAT PF02450.15 AID29768.1 - 0.1 11.7 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase Peptidase_M24 PF00557.24 AID29769.1 - 6.2e-05 22.8 0.0 0.00017 21.3 0.0 1.7 1 1 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID29769.1 - 0.00057 20.5 0.0 0.0015 19.2 0.0 1.7 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain PALP PF00291.25 AID29770.1 - 7.9e-69 232.3 0.0 9.6e-69 232.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Thr_dehydrat_C PF00585.18 AID29770.1 - 3.6e-21 74.7 0.0 8.7e-21 73.5 0.0 1.7 1 0 0 1 1 1 1 C-terminal regulatory domain of Threonine dehydratase DUF1697 PF08002.11 AID29771.1 - 1.8e-41 141.8 0.0 2.2e-41 141.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1697) AAA_25 PF13481.6 AID29771.1 - 0.063 12.9 0.2 5.6 6.5 0.1 2.1 1 1 1 2 2 2 0 AAA domain DUF2218 PF09981.9 AID29772.1 - 1.9e-26 92.3 0.9 2.1e-26 92.2 0.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2218) Glyoxalase PF00903.25 AID29773.1 - 3e-17 63.0 0.0 4.6e-17 62.4 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID29773.1 - 1.1e-10 41.7 0.0 1.2e-09 38.4 0.0 2.0 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29773.1 - 4.6e-05 24.2 0.0 5.8e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 AID29773.1 - 0.042 14.0 0.0 0.11 12.6 0.0 1.7 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_2 PF12681.7 AID29773.1 - 0.059 13.3 0.0 0.17 11.8 0.0 1.7 1 1 0 1 1 1 0 Glyoxalase-like domain CSD PF00313.22 AID29774.1 - 1.3e-31 108.2 0.0 2.3e-15 56.2 0.0 2.2 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID29774.1 - 2.7e-07 30.2 0.1 0.019 14.6 0.0 2.7 2 1 0 2 2 2 2 Ribonuclease B OB domain Rho_RNA_bind PF07497.12 AID29774.1 - 0.036 13.9 0.1 0.3 11.0 0.0 2.1 2 0 0 2 2 2 0 Rho termination factor, RNA-binding domain DUF192 PF02643.15 AID29775.1 - 9.7e-31 105.8 0.0 1.4e-30 105.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Abhydrolase_1 PF00561.20 AID29776.1 - 1e-27 97.4 0.5 1.2e-25 90.6 1.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID29776.1 - 1e-14 55.7 8.0 1.3e-14 55.4 8.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID29776.1 - 6.2e-11 42.0 2.1 3.3e-10 39.6 2.1 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 AID29776.1 - 0.041 12.6 0.0 0.058 12.1 0.0 1.2 1 0 0 1 1 1 0 Ndr family DLH PF01738.18 AID29776.1 - 0.11 12.1 0.1 0.5 9.9 0.0 2.2 2 1 1 3 3 3 0 Dienelactone hydrolase family Glyoxalase PF00903.25 AID29778.1 - 7.6e-07 29.4 0.1 1.7e-05 25.0 0.1 2.9 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID29778.1 - 0.0064 17.3 0.3 0.027 15.3 0.0 2.2 2 1 0 2 2 2 1 Glyoxalase-like domain Ribosomal_L39 PF00832.20 AID29779.1 - 0.016 14.9 1.6 0.08 12.6 0.5 2.0 2 0 0 2 2 2 0 Ribosomal L39 protein SATase_N PF06426.14 AID29780.1 - 1e-36 125.5 0.1 1.4e-36 125.0 0.1 1.2 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep PF00132.24 AID29780.1 - 1.4e-09 37.3 8.3 6.7e-07 28.8 1.1 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID29780.1 - 0.06 13.1 1.2 0.06 13.1 1.2 2.2 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase DUF3126 PF11324.8 AID29781.1 - 2.1e-29 101.1 0.6 2.3e-29 101.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3126) Hexapep PF00132.24 AID29784.1 - 2.1e-19 68.4 10.1 5.9e-09 35.3 2.2 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID29784.1 - 1e-10 41.1 14.1 2.4e-06 27.2 2.4 4.1 3 1 1 4 4 4 2 Hexapeptide repeat of succinyl-transferase Ank_2 PF12796.7 AID29785.1 - 2.1e-14 53.9 0.0 1.3e-07 32.1 0.0 1.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 AID29785.1 - 3.5e-11 43.4 0.0 2.5e-06 27.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 AID29785.1 - 1e-08 35.2 0.0 0.014 15.9 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 AID29785.1 - 9.5e-08 32.2 0.3 0.00039 20.7 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 AID29785.1 - 1.1e-05 25.4 0.0 0.18 12.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Peptidase_C93 PF06035.11 AID29787.1 - 1.8e-69 232.7 0.0 2.3e-69 232.3 0.0 1.1 1 0 0 1 1 1 1 Bacterial transglutaminase-like cysteine proteinase BTLCP PilZ PF07238.14 AID29789.1 - 1.2e-10 41.6 0.3 1.7e-07 31.5 0.1 2.5 2 1 0 2 2 2 2 PilZ domain PAS_5 PF07310.13 AID29790.1 - 4.4e-50 169.0 0.0 5.5e-50 168.7 0.0 1.1 1 0 0 1 1 1 1 PAS domain Rhomboid PF01694.22 AID29791.1 - 7.7e-42 142.8 16.1 7.7e-42 142.8 16.1 1.5 2 0 0 2 2 2 1 Rhomboid family CBS PF00571.28 AID29792.1 - 9e-24 83.7 4.3 4.9e-12 46.1 0.4 2.1 2 0 0 2 2 2 2 CBS domain UPF0180 PF03698.13 AID29792.1 - 0.0079 16.3 0.1 0.026 14.7 0.1 1.9 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0180) Peripla_BP_1 PF00532.21 AID29792.1 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family PucR PF07905.11 AID29792.1 - 0.094 13.0 0.4 3.4 8.0 0.0 2.2 1 1 1 2 2 2 0 Purine catabolism regulatory protein-like family YjhX_toxin PF09857.9 AID29793.1 - 8.1e-42 141.1 0.2 9e-42 140.9 0.2 1.0 1 0 0 1 1 1 1 Putative toxin of bacterial toxin-antitoxin pair Mrr_N PF14338.6 AID29793.1 - 0.032 14.4 0.1 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 Mrr N-terminal domain GatB_N PF02934.15 AID29794.1 - 2.4e-110 368.2 0.0 3.1e-110 367.9 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 AID29794.1 - 4e-52 176.0 0.1 5.7e-52 175.5 0.1 1.2 1 0 0 1 1 1 1 GatB domain Acetyltransf_10 PF13673.7 AID29795.1 - 1.7e-15 57.1 0.0 2.1e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID29795.1 - 4.3e-13 49.5 0.1 5.1e-13 49.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID29795.1 - 4.8e-12 46.1 0.1 7e-12 45.6 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID29795.1 - 9.7e-06 25.8 0.0 1.1e-05 25.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID29795.1 - 0.00043 20.2 0.0 0.00072 19.5 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 AID29795.1 - 0.0049 16.6 0.0 0.015 15.0 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID29795.1 - 0.0063 16.2 0.0 0.012 15.3 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 AID29795.1 - 0.065 13.4 0.0 0.098 12.8 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase AIM24 PF01987.17 AID29796.1 - 2.3e-37 128.8 0.1 2.6e-37 128.6 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 VanZ PF04892.12 AID29797.1 - 0.00019 22.1 1.2 0.00027 21.6 1.2 1.3 1 1 0 1 1 1 1 VanZ like family DUF350 PF03994.14 AID29797.1 - 0.0056 16.8 2.3 0.0056 16.8 2.3 2.0 3 0 0 3 3 3 1 Domain of Unknown Function (DUF350) MASE2 PF05230.11 AID29797.1 - 1.5 8.9 8.2 3.3 7.8 0.1 2.6 3 0 0 3 3 3 0 MASE2 domain Pantoate_ligase PF02569.15 AID29798.1 - 2.4e-92 308.9 0.0 2.7e-92 308.8 0.0 1.0 1 0 0 1 1 1 1 Pantoate-beta-alanine ligase Pantoate_transf PF02548.15 AID29799.1 - 3.4e-99 331.5 4.7 4.1e-99 331.2 4.7 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase FmdA_AmdA PF03069.15 AID29799.1 - 0.0076 15.2 0.0 0.35 9.7 0.0 2.0 1 1 1 2 2 2 2 Acetamidase/Formamidase family NDUFA12 PF05071.16 AID29800.1 - 1.7e-26 92.9 1.9 2.1e-26 92.6 1.9 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 DUF2155 PF09923.9 AID29801.1 - 1.3e-36 124.7 0.0 1.8e-36 124.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2155) MSA-2c PF12238.8 AID29801.1 - 6.8 6.6 7.9 5.1 7.0 3.0 2.1 2 0 0 2 2 2 0 Merozoite surface antigen 2c DUF2603 PF10788.9 AID29802.1 - 0.16 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2603) Sigma70_r1_1 PF03979.14 AID29803.1 - 4e-08 33.2 0.0 4.7e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Sigma-70 factor, region 1.1 NIL PF09383.10 AID29803.1 - 0.059 13.2 0.0 0.073 12.9 0.0 1.1 1 0 0 1 1 1 0 NIL domain DUF1529 PF07485.11 AID29803.1 - 0.071 13.0 0.0 1.3 9.0 0.0 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1259) baeRF_family3 PF18845.1 AID29803.1 - 0.14 12.4 0.0 0.15 12.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 3 Leu_Phe_trans PF03588.14 AID29804.1 - 1.6e-68 229.5 0.0 1.8e-68 229.3 0.0 1.0 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase Acetyltransf_6 PF13480.7 AID29804.1 - 0.0018 18.4 0.4 0.0033 17.6 0.4 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain CPSase_L_D2 PF02786.17 AID29805.1 - 5.2e-76 254.8 0.0 7.3e-76 254.3 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AID29805.1 - 1.6e-45 154.1 0.3 4.4e-45 152.7 0.0 1.9 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AID29805.1 - 1.5e-38 131.2 0.0 3e-38 130.2 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 AID29805.1 - 1.7e-11 44.1 0.0 4e-11 42.9 0.0 1.5 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 AID29805.1 - 3.3e-10 39.8 0.0 5.9e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 AID29805.1 - 1.9e-05 24.8 0.0 0.0001 22.4 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 AID29805.1 - 0.0031 17.0 0.0 0.0062 16.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 AID29805.1 - 0.0099 15.7 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.6 AID29805.1 - 0.028 13.7 0.0 0.087 12.1 0.0 1.7 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp ATPgrasp_Ter PF15632.6 AID29805.1 - 0.12 12.1 0.0 0.27 11.0 0.0 1.5 2 0 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon Biotin_lipoyl PF00364.22 AID29806.1 - 7.8e-20 70.5 0.1 1.5e-19 69.6 0.1 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 AID29806.1 - 8.9e-05 22.2 0.0 0.0044 16.8 0.0 2.5 1 1 1 2 2 2 1 Biotin-lipoyl like RnfC_N PF13375.6 AID29806.1 - 0.00047 20.1 0.0 0.0011 18.9 0.0 1.6 1 1 0 1 1 1 1 RnfC Barrel sandwich hybrid domain GCV_H PF01597.19 AID29806.1 - 0.003 17.4 0.0 0.0047 16.8 0.0 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein DHquinase_II PF01220.19 AID29807.1 - 3.5e-58 195.2 0.0 3.9e-58 195.0 0.0 1.0 1 0 0 1 1 1 1 Dehydroquinase class II AP_endonuc_2 PF01261.24 AID29807.1 - 0.0047 16.4 0.1 0.0056 16.1 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DSBA PF01323.20 AID29808.1 - 4.9e-27 95.0 0.6 4.9e-26 91.7 0.6 2.1 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 AID29808.1 - 1.6e-17 64.2 0.0 6.7e-17 62.1 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin ScsC_N PF18312.1 AID29808.1 - 2.1e-14 53.0 2.6 4e-14 52.1 2.6 1.5 1 0 0 1 1 1 1 Copper resistance protein ScsC N-terminal domain Thioredoxin_2 PF13098.6 AID29808.1 - 3.5e-07 30.6 0.0 7.5e-06 26.4 0.0 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 AID29808.1 - 0.032 14.2 0.0 0.11 12.5 0.0 1.9 2 0 0 2 2 2 0 Thioredoxin SurA_N_3 PF13624.6 AID29808.1 - 0.053 13.3 0.1 0.087 12.6 0.1 1.4 1 0 0 1 1 1 0 SurA N-terminal domain Peptidase_M48 PF01435.18 AID29809.1 - 2e-23 83.2 0.1 5e-23 81.9 0.1 1.7 1 0 0 1 1 1 1 Peptidase family M48 TPR_2 PF07719.17 AID29809.1 - 1.7e-05 24.6 11.6 0.00038 20.3 0.3 4.5 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 AID29809.1 - 3.3e-05 24.4 6.1 0.00014 22.4 1.1 3.0 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_21 PF09976.9 AID29809.1 - 0.00015 21.5 2.4 0.00018 21.3 0.7 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat-like domain TPR_1 PF00515.28 AID29809.1 - 0.0021 17.8 6.0 0.0049 16.6 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID29809.1 - 0.0029 18.3 4.5 0.56 11.2 0.2 4.8 3 2 2 5 5 4 1 Tetratricopeptide repeat TPR_15 PF13429.6 AID29809.1 - 0.0033 16.7 0.8 0.0068 15.7 0.1 1.9 2 1 0 2 2 2 1 Tetratricopeptide repeat Reprolysin_2 PF13574.6 AID29809.1 - 0.0062 16.5 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like TPR_8 PF13181.6 AID29809.1 - 0.011 15.8 3.9 0.041 14.1 0.2 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 AID29809.1 - 0.036 14.4 5.5 7.8 7.1 0.1 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Peptidase_M4 PF01447.18 AID29809.1 - 0.07 13.6 0.0 0.15 12.6 0.0 1.5 1 0 0 1 1 1 0 Thermolysin metallopeptidase, catalytic domain TPR_11 PF13414.6 AID29809.1 - 0.16 11.7 0.1 0.16 11.7 0.1 3.4 2 1 1 3 3 3 0 TPR repeat TPR_19 PF14559.6 AID29809.1 - 0.39 11.3 10.0 5.8 7.5 4.1 3.5 1 1 1 3 3 3 0 Tetratricopeptide repeat Aminotran_1_2 PF00155.21 AID29810.1 - 2.3e-57 194.9 0.0 2.6e-57 194.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 AID29810.1 - 0.023 13.5 0.1 0.047 12.5 0.1 1.7 1 1 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glutaminase PF04960.15 AID29811.1 - 7.3e-114 379.8 0.0 8.4e-114 379.6 0.0 1.0 1 0 0 1 1 1 1 Glutaminase Peptidase_S11 PF00768.20 AID29811.1 - 0.041 13.3 0.0 0.065 12.7 0.0 1.2 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase Beta-lactamase PF00144.24 AID29811.1 - 0.12 11.5 0.1 0.33 10.2 0.0 1.7 2 0 0 2 2 2 0 Beta-lactamase PT-TG PF14449.6 AID29811.1 - 0.13 12.2 0.3 0.54 10.2 0.1 2.1 2 0 0 2 2 2 0 Pre-toxin TG RNase_E_G PF10150.9 AID29812.1 - 5.8e-95 317.8 1.6 1e-94 317.0 1.6 1.4 1 0 0 1 1 1 1 Ribonuclease E/G family S1 PF00575.23 AID29812.1 - 1.1e-05 25.7 1.1 0.00033 20.9 0.0 3.1 3 0 0 3 3 3 1 S1 RNA binding domain Lar_restr_allev PF14354.6 AID29812.1 - 0.079 13.3 0.0 0.23 11.9 0.0 1.8 1 0 0 1 1 1 0 Restriction alleviation protein Lar Amidase_3 PF01520.18 AID29815.1 - 1.5e-43 148.9 0.0 3.1e-43 147.9 0.0 1.4 1 1 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AMIN PF11741.8 AID29815.1 - 3.1e-11 43.3 0.0 7.7e-11 42.0 0.0 1.7 1 0 0 1 1 1 1 AMIN domain Transgly PF00912.22 AID29816.1 - 3.5e-60 202.5 0.0 5.2e-60 202.0 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase Transpeptidase PF00905.22 AID29816.1 - 4.2e-41 141.1 0.4 5.4e-40 137.5 0.4 2.3 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain PCB_OB PF17092.5 AID29816.1 - 5.2e-21 75.5 0.1 1.1e-20 74.5 0.1 1.6 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain PCRF PF03462.18 AID29817.1 - 1.1e-53 182.0 1.6 1.1e-53 182.0 1.6 1.6 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 AID29817.1 - 8.5e-40 135.3 0.4 8.5e-40 135.3 0.4 1.6 2 0 0 2 2 2 1 RF-1 domain MIR PF02815.19 AID29817.1 - 0.1 12.5 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 MIR domain GFA PF04828.14 AID29819.1 - 2.2e-05 24.7 0.3 2.2e-05 24.7 0.3 1.8 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme OmpA PF00691.20 AID29820.1 - 7.6e-22 77.5 0.0 1.2e-21 76.9 0.0 1.3 1 0 0 1 1 1 1 OmpA family Gly-zipper_YMGG PF13441.6 AID29820.1 - 1.3e-08 34.5 24.9 2.3e-08 33.6 24.9 1.5 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 AID29820.1 - 2.7e-08 33.7 17.8 5e-08 32.8 17.8 1.5 1 0 0 1 1 1 1 Glycine zipper Rick_17kDa_Anti PF05433.15 AID29820.1 - 7.3e-05 22.5 22.5 0.00016 21.5 22.5 1.6 1 0 0 1 1 1 1 Glycine zipper 2TM domain LPAM_1 PF08139.12 AID29820.1 - 0.03 14.8 2.3 0.16 12.5 2.3 2.4 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Bacteriocin_IIc PF10439.9 AID29820.1 - 0.14 12.3 13.2 0.34 11.1 13.2 1.7 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide TraT PF05818.12 AID29820.1 - 0.18 11.5 5.4 0.3 10.8 5.4 1.4 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Gly-zipper_OmpA PF13436.6 AID29820.1 - 0.23 11.3 28.3 0.56 10.0 9.0 2.2 1 1 1 2 2 2 0 Glycine-zipper domain DUF3482 PF11981.8 AID29820.1 - 2.3 7.6 9.2 3.4 7.0 9.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) OmpA PF00691.20 AID29822.1 - 2e-10 40.9 0.0 2.3e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 OmpA family DegT_DnrJ_EryC1 PF01041.17 AID29823.1 - 1.2e-47 163.0 0.0 1.5e-47 162.6 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF4070 PF13282.6 AID29824.1 - 4e-14 52.9 0.6 1.3e-13 51.3 0.6 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4070) Radical_SAM PF04055.21 AID29824.1 - 1.2e-10 42.0 0.0 4.4e-10 40.2 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 AID29824.1 - 1.8e-07 31.2 0.2 6e-07 29.5 0.1 1.9 2 0 0 2 2 2 1 B12 binding domain Peripla_BP_4 PF13407.6 AID29825.1 - 1.7e-47 162.1 6.2 2.7e-47 161.5 6.2 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID29825.1 - 1.8e-16 60.4 0.2 2.5e-16 60.0 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID29825.1 - 3.5e-05 24.2 0.0 6.8e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Bmp PF02608.14 AID29825.1 - 0.0058 15.6 0.1 0.0092 15.0 0.1 1.3 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Tad_C PF09977.9 AID29825.1 - 0.12 13.6 3.5 1.5 10.1 0.0 3.0 2 1 1 3 3 3 0 Putative Tad-like Flp pilus-assembly Methyltransf_12 PF08242.12 AID29826.1 - 3.5e-08 34.1 0.0 5.8e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID29826.1 - 8.3e-08 32.8 0.1 2e-07 31.6 0.1 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29826.1 - 2e-06 28.3 0.1 5e-06 27.1 0.1 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID29826.1 - 4e-05 23.5 0.0 6.4e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 AID29826.1 - 0.00013 21.7 0.0 0.00017 21.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 AID29826.1 - 0.00018 21.3 0.0 0.00021 21.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID29826.1 - 0.00035 20.2 0.0 0.00051 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 AID29826.1 - 0.022 14.8 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Hexapep PF00132.24 AID29827.1 - 2.3e-11 42.9 5.6 0.00015 21.3 0.0 3.7 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID29827.1 - 0.0017 18.0 7.3 0.71 9.7 3.6 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase PglD_N PF17836.1 AID29827.1 - 0.028 15.1 0.0 0.047 14.3 0.0 1.4 1 0 0 1 1 1 0 PglD N-terminal domain MttA_Hcf106 PF02416.16 AID29827.1 - 0.051 12.9 0.0 0.097 12.0 0.0 1.4 1 0 0 1 1 1 0 mttA/Hcf106 family WbqC PF08889.11 AID29830.1 - 8.9e-33 114.0 0.0 1.2e-32 113.6 0.0 1.1 1 0 0 1 1 1 1 WbqC-like protein family DEAD PF00270.29 AID29831.1 - 3.9e-50 170.1 0.0 5.9e-50 169.5 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AID29831.1 - 7.1e-31 106.8 0.0 1.3e-28 99.6 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 AID29831.1 - 7.6e-09 35.8 0.0 1.5e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 AID29831.1 - 0.0056 15.9 0.0 0.0096 15.2 0.0 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase UTP25 PF06862.12 AID29831.1 - 0.11 11.3 0.1 9.5 4.9 0.0 2.9 2 1 1 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 Flavi_DEAD PF07652.14 AID29831.1 - 0.16 12.0 0.1 0.55 10.2 0.1 1.9 2 0 0 2 2 2 0 Flavivirus DEAD domain AAA_22 PF13401.6 AID29831.1 - 0.32 11.2 1.3 2.6 8.3 1.3 2.4 1 1 0 1 1 1 0 AAA domain NAD_kinase PF01513.21 AID29832.1 - 1.4e-14 54.0 0.1 2.4e-14 53.3 0.1 1.4 1 1 0 1 1 1 1 ATP-NAD kinase CBM32 PF18344.1 AID29832.1 - 0.072 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Carbohydrate binding module family 32 Penaeidin PF05927.11 AID29833.1 - 0.072 13.8 0.4 0.094 13.5 0.4 1.3 1 1 0 1 1 1 0 Penaeidin Epimerase PF01370.21 AID29834.1 - 2.7e-38 131.8 0.0 3.1e-38 131.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID29834.1 - 1e-36 127.0 0.0 1.8e-36 126.2 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID29834.1 - 5e-09 35.6 0.0 6.9e-09 35.1 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 AID29834.1 - 2.5e-08 33.4 0.0 0.00016 20.9 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein NodS PF05401.11 AID29834.1 - 0.012 15.2 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) Polysacc_synt_2 PF02719.15 AID29834.1 - 0.085 12.0 0.0 0.2 10.8 0.0 1.6 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein SBP_bac_8 PF13416.6 AID29835.1 - 6.6e-23 81.9 4.4 8.2e-23 81.6 4.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID29835.1 - 5e-18 65.4 1.9 5e-18 65.4 1.9 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID29835.1 - 1.2e-06 28.5 0.0 0.0009 19.1 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein adh_short PF00106.25 AID29835.1 - 0.092 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Amidase PF01425.21 AID29837.1 - 9.3e-83 278.7 0.0 2.4e-82 277.3 0.0 1.6 1 1 0 1 1 1 1 Amidase Herpes_capsid PF06112.11 AID29837.1 - 0.11 12.5 4.4 0.21 11.6 4.4 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein VBS PF08913.10 AID29837.1 - 0.12 12.9 0.0 0.24 11.9 0.0 1.4 1 0 0 1 1 1 0 Vinculin Binding Site FAM199X PF15814.5 AID29837.1 - 0.42 9.6 1.0 0.69 8.9 1.0 1.3 1 0 0 1 1 1 0 Protein family FAM199X TetR_N PF00440.23 AID29838.1 - 6e-13 48.4 0.1 1.4e-12 47.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Lactamase_B PF00753.27 AID29839.1 - 7.4e-18 65.3 10.0 6.1e-17 62.3 10.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily ABC_tran PF00005.27 AID29840.1 - 3.3e-32 111.9 0.0 5.8e-32 111.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID29840.1 - 5.9e-15 55.2 0.1 4.6e-14 52.4 0.0 2.4 1 1 1 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID29840.1 - 1.9e-05 24.6 0.4 0.012 15.5 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID29840.1 - 0.0006 19.5 0.2 0.0013 18.4 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID29840.1 - 0.001 18.6 0.2 0.3 10.5 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 AID29840.1 - 0.0013 18.3 0.2 0.014 14.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID29840.1 - 0.012 16.0 0.3 0.031 14.7 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain AAA_15 PF13175.6 AID29840.1 - 0.026 14.2 0.0 0.038 13.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AID29840.1 - 0.028 14.3 0.1 0.078 12.9 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase T2SSE PF00437.20 AID29840.1 - 0.033 13.3 0.2 0.093 11.8 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_30 PF13604.6 AID29840.1 - 0.041 13.6 0.0 0.11 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID29840.1 - 0.07 13.6 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID29840.1 - 0.22 11.2 0.0 0.73 9.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 AID29840.1 - 0.27 11.5 1.8 0.56 10.5 0.2 2.0 2 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 AID29841.1 - 1.2e-12 47.9 15.1 1.2e-12 47.9 15.1 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID29842.1 - 7.2e-10 38.9 26.4 3.3e-08 33.5 26.4 2.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ATP-synt_8 PF00895.20 AID29842.1 - 0.19 12.2 0.0 0.19 12.2 0.0 2.9 3 0 0 3 3 3 0 ATP synthase protein 8 SBP_bac_8 PF13416.6 AID29843.1 - 4.1e-32 112.1 4.0 5.4e-32 111.7 4.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID29843.1 - 1.6e-18 67.1 0.3 2.3e-18 66.5 0.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID29843.1 - 9.2e-12 45.5 7.0 1.7e-11 44.7 7.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID29843.1 - 1.3e-10 41.4 0.1 2.3e-10 40.6 0.1 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein TetR_N PF00440.23 AID29844.1 - 1.7e-13 50.1 2.2 2.9e-13 49.4 2.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 AID29844.1 - 0.029 14.1 2.0 0.064 13.1 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_40 PF14493.6 AID29844.1 - 0.055 13.9 0.1 0.2 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_integrase PF00589.22 AID29845.1 - 2.5e-23 82.8 0.0 4.7e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_3 PF14659.6 AID29845.1 - 6e-08 32.8 0.0 1.4e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 AID29845.1 - 0.017 15.4 0.0 0.042 14.2 0.0 1.6 2 0 0 2 2 2 0 Phage integrase SAM-like domain HTH_17 PF12728.7 AID29846.1 - 0.00034 20.7 0.0 0.00057 20.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID29846.1 - 0.0066 16.2 0.1 0.067 13.0 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain Phage_Cox PF10743.9 AID29846.1 - 0.013 15.6 0.0 0.015 15.3 0.0 1.0 1 0 0 1 1 1 0 Regulatory phage protein cox HTH_28 PF13518.6 AID29846.1 - 0.02 15.0 0.4 0.17 12.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 AID29846.1 - 0.04 13.8 0.0 0.05 13.5 0.0 1.3 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TetR_N PF00440.23 AID29846.1 - 0.098 12.5 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family AAA_25 PF13481.6 AID29848.1 - 3.4e-32 111.6 0.1 5.4e-32 110.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 AID29848.1 - 0.0062 15.9 0.0 0.0093 15.3 0.0 1.3 1 0 0 1 1 1 1 KaiC ParA PF10609.9 AID29848.1 - 0.029 13.8 0.1 0.044 13.2 0.1 1.2 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 AID29848.1 - 0.043 13.9 0.6 0.1 12.7 0.6 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Rad51 PF08423.11 AID29848.1 - 0.049 12.9 0.0 0.15 11.3 0.0 1.7 1 1 0 1 1 1 0 Rad51 DUF2625 PF10946.8 AID29848.1 - 0.19 10.8 0.0 0.42 9.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF2625 Mobilization_B PF17511.2 AID29851.1 - 1.9 8.8 9.3 3 8.2 0.2 2.1 2 0 0 2 2 2 0 Mobilization protein B Phage_capsid PF05065.13 AID29852.1 - 1.1e-25 90.5 0.5 2.2e-25 89.6 0.5 1.4 1 1 0 1 1 1 1 Phage capsid family Tombus_P19 PF03220.13 AID29852.1 - 0.046 13.4 0.0 0.082 12.6 0.0 1.3 1 0 0 1 1 1 0 Tombusvirus P19 core protein Peptidase_S78 PF04586.17 AID29853.1 - 2.3e-06 27.9 0.0 2.9e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Caudovirus prohead serine protease GatB_Yqey PF02637.18 AID29856.1 - 0.11 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 GatB domain Cytochrom_B562 PF07361.11 AID29857.1 - 0.0026 18.4 1.1 0.0033 18.0 1.1 1.1 1 0 0 1 1 1 1 Cytochrome b562 TMP_2 PF06791.13 AID29858.1 - 1.9e-13 50.5 7.3 1.9e-13 50.5 7.3 5.1 2 2 2 4 4 4 1 Prophage tail length tape measure protein Syntaxin-6_N PF09177.11 AID29858.1 - 0.061 13.9 3.5 3.5 8.3 0.5 4.2 3 1 1 4 4 4 0 Syntaxin 6, N-terminal DUF1664 PF07889.12 AID29858.1 - 0.11 12.5 8.3 0.25 11.4 0.4 4.0 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) DUF2316 PF10078.9 AID29858.1 - 0.51 10.6 2.0 1.8 8.9 0.1 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2316) EzrA PF06160.12 AID29858.1 - 8.5 4.4 6.1 1.7 6.7 0.1 2.6 3 1 0 3 3 3 0 Septation ring formation regulator, EzrA Alpha_E1_glycop PF01589.16 AID29859.1 - 0.071 11.7 0.6 0.071 11.7 0.6 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Phage_holin_3_6 PF07332.11 AID29859.1 - 0.09 12.8 2.6 0.091 12.8 2.6 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2946 PF11162.8 AID29864.1 - 0.0095 16.6 3.6 0.012 16.3 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2946) SelP_N PF04592.14 AID29864.1 - 0.23 10.8 12.3 0.3 10.5 12.3 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region BA14K PF07886.11 AID29865.1 - 3.2e-11 42.9 9.9 4.6e-11 42.4 9.9 1.2 1 0 0 1 1 1 1 BA14K-like protein SepZ PF06066.11 AID29865.1 - 0.064 13.5 1.3 0.093 13.0 1.3 1.2 1 0 0 1 1 1 0 SepZ NDUF_B12 PF08122.12 AID29865.1 - 0.12 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family Disulph_isomer PF06491.11 AID29866.1 - 0.02 15.0 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Disulphide isomerase IclR PF01614.18 AID29867.1 - 1.9e-18 66.5 0.0 5.3e-13 48.9 0.0 2.3 1 1 1 2 2 2 2 Bacterial transcriptional regulator HTH_IclR PF09339.10 AID29867.1 - 3.5e-17 61.9 0.3 3.5e-17 61.9 0.3 2.0 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID29867.1 - 2.2e-06 27.1 0.0 2.1e-05 24.0 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID29867.1 - 6.2e-06 26.0 0.1 2e-05 24.4 0.0 2.0 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 AID29867.1 - 3.6e-05 23.6 0.0 0.00011 22.0 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 AID29867.1 - 0.00062 19.6 0.2 0.0024 17.7 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID29867.1 - 0.00063 19.7 0.1 0.002 18.1 0.1 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID29867.1 - 0.0016 18.3 0.4 0.0047 16.8 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family DprA_WH PF17782.1 AID29867.1 - 0.0018 18.3 0.2 0.017 15.3 0.1 2.2 2 0 0 2 2 2 1 DprA winged helix domain Rrf2 PF02082.20 AID29867.1 - 0.0041 17.4 0.1 0.0092 16.3 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_23 PF13384.6 AID29867.1 - 0.013 15.3 0.0 0.033 14.0 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Crp_2 PF13545.6 AID29867.1 - 0.13 12.3 1.5 0.41 10.6 0.1 2.5 3 0 0 3 3 2 0 Crp-like helix-turn-helix domain RdRP_3 PF00998.23 AID29867.1 - 0.19 10.4 0.0 0.29 9.8 0.0 1.2 1 0 0 1 1 1 0 Viral RNA dependent RNA polymerase HTH_AsnC-type PF13404.6 AID29867.1 - 2.9 7.8 4.9 0.6 10.0 0.4 2.3 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain TPP_enzyme_N PF02776.18 AID29868.1 - 1.4e-52 177.8 1.9 5.3e-49 166.1 0.5 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID29868.1 - 1.4e-37 128.9 0.1 1.3e-35 122.5 0.0 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 AID29868.1 - 6e-37 126.4 0.3 2.1e-36 124.7 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain DUF2786 PF10979.8 AID29868.1 - 0.26 11.2 2.5 1 9.3 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2786) AP_endonuc_2 PF01261.24 AID29869.1 - 4.1e-39 134.2 0.1 5.2e-39 133.9 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel NAD_binding_2 PF03446.15 AID29870.1 - 1.8e-50 171.2 3.3 1.8e-50 171.2 1.7 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 AID29870.1 - 7.6e-38 129.5 2.0 1.2e-37 128.8 2.0 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 AID29870.1 - 8.4e-08 32.7 1.9 4.2e-07 30.5 0.2 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 AID29870.1 - 6.7e-07 28.8 0.1 1.2e-05 24.7 0.1 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 AID29870.1 - 2.1e-05 24.2 0.7 5.2e-05 22.9 0.1 1.9 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ApbA PF02558.16 AID29870.1 - 0.0028 17.3 0.1 0.013 15.2 0.0 2.0 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 AID29870.1 - 0.0082 16.0 3.8 0.015 15.2 0.2 2.8 2 2 1 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID29870.1 - 0.047 13.7 0.1 0.15 12.1 0.0 1.9 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase SpoU_methylase PF00588.19 AID29871.1 - 2.4e-34 118.5 0.0 3.3e-34 118.1 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 AID29871.1 - 1.3e-15 57.4 0.0 2.5e-15 56.5 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding DUF937 PF06078.11 AID29872.1 - 2.3e-13 51.0 2.4 2.9e-13 50.6 2.4 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF937) Transgly_assoc PF04226.13 AID29873.1 - 6e-12 45.6 14.4 6e-12 45.6 14.4 2.1 2 0 0 2 2 2 1 Transglycosylase associated protein DUF5518 PF17647.1 AID29873.1 - 0.0044 17.2 13.1 0.0064 16.6 13.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5518) MccV PF17508.2 AID29873.1 - 0.14 12.7 2.2 0.19 12.3 2.1 1.4 1 1 0 1 1 1 0 Microcin V bacteriocin CPP1-like PF11833.8 AID29873.1 - 0.24 11.0 2.9 0.27 10.8 2.9 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Gly-zipper_YMGG PF13441.6 AID29873.1 - 0.35 10.6 11.9 32 4.4 11.9 2.2 1 1 0 1 1 1 0 YMGG-like Gly-zipper DUF4235 PF14019.6 AID29873.1 - 0.48 10.5 7.0 4.6 7.4 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF4235) FeoB_C PF07664.12 AID29873.1 - 0.88 9.3 8.7 1.1 8.9 0.2 2.9 1 1 2 3 3 3 0 Ferrous iron transport protein B C terminus DUF2207 PF09972.9 AID29873.1 - 0.99 8.1 6.0 1.2 7.8 6.0 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) FeoB_associated PF12669.7 AID29873.1 - 3.9 7.9 12.0 4.3 7.8 0.5 3.1 2 1 1 3 3 3 0 FeoB-associated Cys-rich membrane protein Clostridium_P47 PF06597.11 AID29873.1 - 5 5.7 7.5 6.2 5.4 7.5 1.2 1 1 0 1 1 1 0 Clostridium P-47 protein Phage_holin_3_6 PF07332.11 AID29873.1 - 6.2 6.9 10.8 0.64 10.1 5.6 1.8 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Gly-zipper_Omp PF13488.6 AID29873.1 - 8.2 6.5 18.1 2.2 8.3 8.2 2.6 1 1 1 2 2 2 0 Glycine zipper TraL PF07178.11 AID29873.1 - 9.3 6.8 8.7 55 4.3 5.0 2.7 1 1 1 2 2 2 0 TraL protein EamA PF00892.20 AID29875.1 - 4.1e-15 56.2 29.6 4.5e-09 36.6 7.2 2.2 2 0 0 2 2 2 2 EamA-like transporter family UPF0139 PF03669.13 AID29875.1 - 0.13 12.2 0.1 0.42 10.5 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) DUF2459 PF09601.10 AID29877.1 - 2.5e-40 138.1 0.0 2.8e-40 137.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2459) Bac_globin PF01152.21 AID29879.1 - 7.2e-16 58.4 0.0 9e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial-like globin Acyl-CoA_ox_N PF14749.6 AID29879.1 - 0.027 15.0 0.0 0.066 13.8 0.0 1.6 2 0 0 2 2 2 0 Acyl-coenzyme A oxidase N-terminal Glycolipid_bind PF06475.11 AID29880.1 - 1.8e-05 24.3 0.8 0.00063 19.3 0.1 1.9 1 1 1 2 2 2 2 Putative glycolipid-binding Cypo_polyhedrin PF05865.11 AID29880.1 - 0.078 12.4 0.0 0.081 12.3 0.0 1.0 1 0 0 1 1 1 0 Cypovirus polyhedrin protein SecE PF00584.20 AID29881.1 - 3.5e-17 62.1 1.7 4.2e-17 61.8 1.7 1.0 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex NusG PF02357.19 AID29882.1 - 2.1e-24 85.8 0.1 3e-24 85.4 0.1 1.2 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 AID29882.1 - 0.00024 20.9 0.5 0.0012 18.8 0.0 2.2 2 0 0 2 2 2 1 KOW motif Spt5-NGN PF03439.13 AID29882.1 - 0.0077 16.1 0.0 0.024 14.5 0.0 1.8 1 1 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section Imm74 PF15603.6 AID29882.1 - 0.027 14.7 0.2 0.45 10.7 0.0 2.5 2 0 0 2 2 2 0 Immunity protein 74 Ribosomal_L11_N PF03946.14 AID29883.1 - 3.8e-31 106.7 0.2 6.7e-31 105.9 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 AID29883.1 - 2.2e-28 98.6 0.4 4.2e-28 97.7 0.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 AID29884.1 - 2.3e-55 187.5 0.0 2.9e-55 187.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.20 AID29885.1 - 7.6e-26 90.2 0.0 1.3e-25 89.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 TMP_2 PF06791.13 AID29885.1 - 0.0078 15.9 0.6 0.0078 15.9 0.6 2.3 1 1 1 2 2 2 1 Prophage tail length tape measure protein Ribosomal_L12 PF00542.19 AID29886.1 - 5.8e-32 109.9 6.0 5.8e-32 109.9 6.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 AID29886.1 - 2.8e-21 74.9 13.3 1.4e-19 69.6 10.6 2.6 2 0 0 2 2 2 2 Ribosomal protein L7/L12 dimerisation domain RNA_pol_Rpb2_6 PF00562.28 AID29887.1 - 7.9e-167 555.2 0.1 2e-166 553.9 0.1 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 AID29887.1 - 5.8e-34 117.4 0.0 1.7e-33 115.9 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 AID29887.1 - 1.9e-32 111.2 0.0 3.9e-32 110.2 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.20 AID29887.1 - 6.6e-27 93.8 0.0 1.3e-26 92.8 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 AID29887.1 - 3e-26 92.2 0.4 2.9e-18 66.2 0.3 2.4 2 0 0 2 2 2 2 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_45 PF10385.9 AID29887.1 - 3.7e-25 88.0 0.2 2.7e-24 85.2 0.2 2.6 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain Biotin_lipoyl_2 PF13533.6 AID29887.1 - 0.11 12.3 0.2 0.72 9.7 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like RNA_pol_Rpb1_1 PF04997.12 AID29888.1 - 3.3e-88 296.0 0.1 8.5e-88 294.7 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 AID29888.1 - 3.9e-72 242.9 0.1 8.7e-72 241.7 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 AID29888.1 - 2.6e-37 128.6 0.0 9.7e-34 117.0 0.0 3.0 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 AID29888.1 - 2e-27 96.1 0.0 6e-27 94.5 0.0 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 AID29888.1 - 4e-18 65.3 0.3 1.1e-17 64.0 0.3 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 Biotin_lipoyl_2 PF13533.6 AID29888.1 - 1.3e-05 24.9 0.0 0.28 11.0 0.0 4.2 3 0 0 3 3 3 2 Biotin-lipoyl like Peptidase_M23 PF01551.22 AID29888.1 - 0.00054 20.1 0.9 1.8 8.8 0.1 4.7 4 1 1 5 5 5 1 Peptidase family M23 RnfC_N PF13375.6 AID29888.1 - 0.012 15.5 0.1 0.15 12.1 0.0 2.9 3 0 0 3 3 3 0 RnfC Barrel sandwich hybrid domain QRPTase_N PF02749.16 AID29888.1 - 0.066 13.3 0.0 17 5.6 0.0 3.7 3 0 0 3 3 3 0 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl PF00364.22 AID29888.1 - 0.085 12.7 0.0 6.9 6.6 0.0 3.5 3 0 0 3 3 3 0 Biotin-requiring enzyme Apocytochr_F_C PF01333.19 AID29888.1 - 0.1 12.7 0.0 3 7.9 0.0 2.8 2 0 0 2 2 2 0 Apocytochrome F, C-terminal Methyltransf_3 PF01596.17 AID29889.1 - 7.4e-38 129.9 0.0 9.3e-38 129.5 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 AID29889.1 - 6e-18 65.8 0.0 1.1e-17 65.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AID29889.1 - 4.2e-08 33.2 0.0 5.6e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AID29889.1 - 1.2e-06 28.3 0.0 1.8e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID29889.1 - 7.8e-05 23.3 0.0 0.00014 22.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 AID29889.1 - 0.015 14.9 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_18 PF12847.7 AID29889.1 - 0.038 13.9 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 AID29889.1 - 0.17 11.5 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase GFO_IDH_MocA PF01408.22 AID29890.1 - 8.1e-19 68.6 0.0 2.4e-18 67.1 0.0 1.8 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding_2 PF13380.6 AID29890.1 - 0.043 14.3 0.0 0.12 12.9 0.0 1.7 2 0 0 2 2 2 0 CoA binding domain Ribosom_S12_S23 PF00164.25 AID29892.1 - 9.8e-41 138.0 2.0 1.1e-40 137.8 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 AID29893.1 - 1.7e-69 232.2 2.6 1.9e-69 232.0 2.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Mak_N_cap PF18085.1 AID29893.1 - 0.038 15.0 0.1 0.077 14.1 0.1 1.5 1 1 0 1 1 1 0 Maltokinase N-terminal cap domain GTP_EFTU PF00009.27 AID29894.1 - 8.8e-68 227.7 0.0 1.3e-67 227.1 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 AID29894.1 - 4.6e-44 149.1 0.1 1e-43 148.0 0.1 1.6 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 AID29894.1 - 1.5e-35 121.1 0.1 3.7e-35 119.8 0.1 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 AID29894.1 - 1.3e-29 102.1 0.1 4e-29 100.5 0.1 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AID29894.1 - 1.2e-15 57.7 2.6 3e-15 56.4 0.2 2.8 3 0 0 3 3 3 1 Elongation factor Tu domain 2 RF3_C PF16658.5 AID29894.1 - 4.4e-06 26.6 0.0 9.1e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 AID29894.1 - 0.019 15.1 0.0 0.04 14.0 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase GTP_EFTU PF00009.27 AID29895.1 - 3.2e-29 101.9 0.7 3.9e-29 101.6 0.7 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 AID29895.1 - 7.6e-05 22.8 0.0 8.9e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 AID29895.1 - 0.038 13.7 0.1 0.48 10.2 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Ribosomal_S10 PF00338.22 AID29896.1 - 2.6e-38 130.2 0.1 2.9e-38 130.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Ribosomal_L3 PF00297.22 AID29897.1 - 3.4e-13 49.3 9.8 7.9e-12 44.8 9.8 2.1 1 1 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 AID29898.1 - 7.3e-61 205.2 1.3 8.2e-61 205.0 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 AID29899.1 - 1.3e-33 115.2 2.5 1.5e-33 115.0 2.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 AID29900.1 - 1.8e-53 180.1 6.3 2.8e-53 179.4 6.3 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 AID29900.1 - 1.3e-31 108.3 1.0 6.9e-31 106.0 1.1 2.1 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 AID29901.1 - 3.8e-35 119.6 0.0 4.4e-35 119.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L22 PF00237.19 AID29902.1 - 7.4e-30 103.2 0.4 8.8e-30 103.0 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 AID29903.1 - 2.2e-40 137.1 0.7 4.9e-40 135.9 0.7 1.6 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 AID29903.1 - 6e-20 70.9 4.4 6e-20 70.9 4.4 1.6 2 0 0 2 2 2 1 KH domain KH_4 PF13083.6 AID29903.1 - 0.037 13.9 0.2 0.071 13.0 0.2 1.5 1 0 0 1 1 1 0 KH domain KH_1 PF00013.29 AID29903.1 - 0.047 13.5 0.1 0.089 12.6 0.1 1.5 1 0 0 1 1 1 0 KH domain MRP-S24 PF14955.6 AID29903.1 - 0.11 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 DNA_pol3_a_NI PF14480.6 AID29903.1 - 0.15 12.1 0.3 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus I Ribosomal_L16 PF00252.18 AID29904.1 - 2.9e-49 166.5 0.3 3.2e-49 166.3 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_L29 PF00831.23 AID29905.1 - 2.4e-24 85.0 5.4 2.8e-24 84.9 5.4 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein Ribosomal_S17 PF00366.20 AID29906.1 - 5.7e-28 96.8 8.8 6.4e-28 96.7 8.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S17 PCB_OB PF17092.5 AID29906.1 - 0.085 13.6 0.9 0.11 13.3 0.9 1.1 1 0 0 1 1 1 0 Penicillin-binding protein OB-like domain Ribosomal_L14 PF00238.19 AID29907.1 - 4.8e-57 191.3 2.6 5.3e-57 191.2 2.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e ribosomal_L24 PF17136.4 AID29908.1 - 1.6e-28 98.9 0.4 2.4e-28 98.3 0.4 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 AID29908.1 - 3.8e-07 29.8 0.8 3.8e-07 29.8 0.8 2.0 2 0 0 2 2 2 1 KOW motif Ribosomal_L5_C PF00673.21 AID29909.1 - 2.7e-43 146.0 0.0 4.5e-43 145.4 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 AID29909.1 - 1.3e-25 89.4 0.1 2.9e-25 88.4 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 AID29910.1 - 9.7e-23 79.7 0.4 9.7e-23 79.7 0.4 1.5 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e Ribosomal_S8 PF00410.19 AID29911.1 - 9.2e-48 161.4 0.0 1e-47 161.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Phage_CI_C PF16452.5 AID29911.1 - 0.084 13.2 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor C-terminal domain Ribosomal_L6 PF00347.23 AID29912.1 - 7.6e-40 135.5 4.5 2e-21 76.4 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_L18p PF00861.22 AID29913.1 - 3.2e-44 150.0 3.8 3.5e-44 149.9 3.8 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L5e PF17144.4 AID29913.1 - 0.00022 21.3 0.1 0.00026 21.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 FlaG PF03646.15 AID29913.1 - 0.14 12.4 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 FlaG protein Ribosomal_S5 PF00333.20 AID29914.1 - 4.1e-29 100.4 2.4 7e-29 99.6 2.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 AID29914.1 - 9e-29 98.8 0.1 1.3e-28 98.2 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 AID29915.1 - 8.3e-15 54.4 0.1 1e-14 54.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 AID29916.1 - 1.1e-37 129.6 2.8 1.3e-37 129.3 2.8 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 AID29917.1 - 1.5e-116 389.0 17.5 1.9e-116 388.7 17.5 1.1 1 0 0 1 1 1 1 SecY translocase YrhC PF14143.6 AID29917.1 - 2.7 8.2 8.6 12 6.0 0.0 4.1 4 0 0 4 4 4 0 YrhC-like protein ADK PF00406.22 AID29918.1 - 9e-38 129.7 0.0 1.1e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 AID29918.1 - 1.8e-09 38.1 0.1 2.7e-09 37.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 AID29918.1 - 0.019 15.3 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain YolD PF08863.10 AID29918.1 - 0.067 13.2 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 YolD-like protein Ribosomal_S13 PF00416.22 AID29919.1 - 4.7e-32 111.1 7.7 1.5e-30 106.2 7.7 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 HHH_6 PF14579.6 AID29919.1 - 0.01 16.1 1.7 0.15 12.3 0.1 2.4 2 1 1 3 3 3 0 Helix-hairpin-helix motif FbpA PF05833.11 AID29919.1 - 0.012 14.4 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) HHH_3 PF12836.7 AID29919.1 - 0.019 15.2 0.0 0.043 14.1 0.0 1.7 1 1 0 1 1 1 0 Helix-hairpin-helix motif PGM_PMM_II PF02879.16 AID29919.1 - 0.12 13.0 0.0 0.14 12.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ribosomal_S11 PF00411.19 AID29920.1 - 1.5e-50 170.2 0.9 1.8e-50 169.9 0.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_L18p PF00861.22 AID29920.1 - 0.0061 16.9 0.4 0.009 16.4 0.4 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PepSY_2 PF13670.6 AID29920.1 - 0.027 14.5 0.9 0.33 11.0 0.8 2.1 1 1 1 2 2 2 0 Peptidase propeptide and YPEB domain PEP-utilizers_C PF02896.18 AID29920.1 - 0.065 12.3 0.0 0.086 11.9 0.0 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain RNA_pol_A_CTD PF03118.15 AID29921.1 - 1.8e-25 88.5 0.3 4.5e-25 87.2 0.3 1.7 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_bac PF01000.26 AID29921.1 - 7e-24 84.3 0.0 1.9e-23 83.0 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 AID29921.1 - 1.1e-22 79.2 0.0 1.9e-22 78.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF211 PF02680.14 AID29921.1 - 5.1e-05 23.4 0.6 0.067 13.4 0.2 2.6 2 0 0 2 2 2 2 Uncharacterized ArCR, COG1888 IDH PF03971.14 AID29921.1 - 0.047 12.1 0.0 0.069 11.6 0.0 1.2 1 0 0 1 1 1 0 Monomeric isocitrate dehydrogenase Ribosomal_L17 PF01196.19 AID29922.1 - 1.4e-36 125.3 0.0 1.7e-36 125.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 Trypsin_2 PF13365.6 AID29924.1 - 1.1e-33 117.3 1.5 1.9e-33 116.5 1.5 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 AID29924.1 - 2.4e-26 91.9 1.6 1.4e-15 57.4 0.0 3.9 4 1 0 4 4 4 2 PDZ domain PDZ_6 PF17820.1 AID29924.1 - 6.6e-20 70.7 3.0 9.2e-11 41.4 0.1 3.4 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 AID29924.1 - 1.7e-16 60.3 0.3 3.6e-08 33.6 0.0 3.6 3 0 0 3 3 3 2 PDZ domain Trypsin PF00089.26 AID29924.1 - 2.2e-13 50.5 0.0 3.9e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Trypsin PDZ_1 PF12812.7 AID29924.1 - 0.00015 21.7 0.0 0.092 12.8 0.0 2.5 2 0 0 2 2 2 2 PDZ-like domain Tricorn_PDZ PF14685.6 AID29924.1 - 0.00023 21.1 0.1 0.29 11.1 0.0 3.1 2 0 0 2 2 2 2 Tricorn protease PDZ domain TrkA_C PF02080.21 AID29924.1 - 0.0023 17.7 0.2 0.5 10.2 0.0 2.9 3 0 0 3 3 3 1 TrkA-C domain Peptidase_S46 PF10459.9 AID29924.1 - 0.049 12.3 0.4 1.4 7.5 0.4 2.1 2 0 0 2 2 2 0 Peptidase S46 DUF4115 PF13464.6 AID29924.1 - 0.066 13.4 1.7 34 4.7 0.0 4.1 4 0 0 4 4 4 0 Domain of unknown function (DUF4115) MgsA_C PF12002.8 AID29925.1 - 4.8e-67 225.1 0.1 6.6e-67 224.6 0.1 1.2 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal AAA_assoc_2 PF16193.5 AID29925.1 - 1.7e-20 73.2 0.0 3.6e-20 72.1 0.0 1.6 1 0 0 1 1 1 1 AAA C-terminal domain AAA PF00004.29 AID29925.1 - 1.9e-15 57.5 0.0 3.1e-15 56.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 AID29925.1 - 3.7e-13 49.5 0.0 7.9e-13 48.5 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 AID29925.1 - 7.9e-07 29.1 0.3 1.8e-05 24.8 0.2 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AID29925.1 - 1.6e-05 24.7 0.0 0.0022 17.7 0.0 2.3 1 1 1 2 2 2 1 Sigma-54 interaction domain AAA_22 PF13401.6 AID29925.1 - 4.4e-05 23.8 0.3 0.023 15.0 0.0 2.5 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 AID29925.1 - 8.1e-05 23.1 1.1 0.015 15.7 0.2 2.6 1 1 1 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 AID29925.1 - 9.1e-05 21.9 0.3 0.12 11.8 0.1 2.2 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 AID29925.1 - 0.00028 20.7 0.0 0.0011 18.8 0.0 2.0 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.6 AID29925.1 - 0.00054 20.1 0.0 0.0016 18.6 0.0 1.7 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 AID29925.1 - 0.0013 19.3 0.0 0.0027 18.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID29925.1 - 0.0017 18.1 0.5 0.14 11.9 0.4 2.4 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 AID29925.1 - 0.0033 17.4 0.2 0.63 10.0 0.0 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_33 PF13671.6 AID29925.1 - 0.0071 16.5 0.2 0.016 15.3 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 AID29925.1 - 0.011 15.8 0.0 0.02 14.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID29925.1 - 0.012 15.3 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 AID29925.1 - 0.025 14.8 0.0 0.062 13.5 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_19 PF13245.6 AID29925.1 - 0.032 14.6 0.7 4.3 7.7 0.3 2.4 1 1 1 2 2 2 0 AAA domain TIP49 PF06068.13 AID29925.1 - 0.062 12.5 0.0 0.092 11.9 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain ABC_tran PF00005.27 AID29925.1 - 0.078 13.5 0.0 0.17 12.4 0.0 1.4 1 1 0 1 1 1 0 ABC transporter AAA_24 PF13479.6 AID29925.1 - 0.093 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID29925.1 - 0.12 12.8 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_11 PF13086.6 AID29925.1 - 0.15 11.8 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID29925.1 - 0.2 11.5 0.1 0.48 10.3 0.1 1.6 2 0 0 2 2 1 0 RsgA GTPase AAA_2 PF07724.14 AID29925.1 - 0.21 11.7 0.0 0.74 9.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF930 PF06059.12 AID29926.1 - 2.9e-32 111.2 0.0 4e-32 110.7 0.0 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF930) Asp_Arg_Hydrox PF05118.15 AID29927.1 - 5.8e-08 32.7 0.0 8.1e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase CRCB PF02537.15 AID29929.1 - 3.2e-21 75.4 11.0 3.8e-21 75.2 11.0 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) YwiC PF14256.6 AID29929.1 - 0.026 14.8 3.7 0.034 14.5 3.7 1.2 1 0 0 1 1 1 0 YwiC-like protein Spore_YabQ PF09578.10 AID29929.1 - 1.2 9.4 9.9 0.12 12.6 3.6 2.1 2 0 0 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) TM_helix PF05552.12 AID29929.1 - 2 8.4 10.1 1 9.4 3.2 2.8 2 1 0 2 2 2 0 Conserved TM helix LptF_LptG PF03739.14 AID29929.1 - 3.2 6.5 9.3 4.2 6.1 9.3 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG YiaAB PF05360.14 AID29929.1 - 4.2 7.7 13.0 10 6.4 1.3 3.0 2 1 1 3 3 3 0 yiaA/B two helix domain PseudoU_synth_2 PF00849.22 AID29930.1 - 3e-36 124.9 0.0 3.8e-36 124.6 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 AID29930.1 - 0.00029 20.5 0.0 0.00058 19.5 0.0 1.6 1 0 0 1 1 1 1 S4 domain AAA_19 PF13245.6 AID29930.1 - 0.086 13.2 0.0 0.18 12.1 0.0 1.4 1 1 0 1 1 1 0 AAA domain EamA PF00892.20 AID29931.1 - 9.9e-35 119.7 37.7 9.6e-18 64.7 13.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 AID29931.1 - 0.01 15.9 3.8 0.53 10.3 0.3 3.1 3 0 0 3 3 3 0 Putative transmembrane family 234 TPT PF03151.16 AID29931.1 - 0.039 13.3 6.2 0.46 9.8 0.6 2.4 1 1 0 2 2 2 0 Triose-phosphate Transporter family ATP12 PF07542.11 AID29932.1 - 3e-33 114.7 0.0 5.1e-33 113.9 0.0 1.4 1 0 0 1 1 1 1 ATP12 chaperone protein Sugar_tr PF00083.24 AID29933.1 - 1.2e-33 116.7 20.6 1.8e-29 102.9 8.7 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 AID29933.1 - 4.6e-28 98.2 34.8 6.3e-28 97.7 34.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 AID29933.1 - 3.5e-11 42.3 7.1 3.5e-11 42.3 7.1 2.1 1 1 0 2 2 2 1 MFS/sugar transport protein DUF2721 PF11026.8 AID29933.1 - 0.019 14.8 0.8 0.019 14.8 0.8 3.0 2 1 0 3 3 3 0 Protein of unknown function (DUF2721) Sugar_tr PF00083.24 AID29934.1 - 1.9e-06 27.0 5.4 2.3e-06 26.8 5.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1482 PF07358.11 AID29934.1 - 0.032 14.1 0.1 0.07 13.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1482) DUF2198 PF09964.9 AID29934.1 - 0.096 12.8 0.5 0.096 12.8 0.5 2.1 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF485 PF04341.12 AID29934.1 - 2.2 8.3 6.2 5 7.1 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function, DUF485 DUF2735 PF10931.8 AID29935.1 - 1.2e-09 38.7 0.3 1.3e-09 38.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2735) NO_synthase PF02898.15 AID29935.1 - 0.012 14.7 0.0 0.012 14.6 0.0 1.0 1 0 0 1 1 1 0 Nitric oxide synthase, oxygenase domain Gln-synt_C PF00120.24 AID29936.1 - 2.3e-17 63.0 0.0 1.4e-16 60.5 0.0 1.8 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AID29936.1 - 4.4e-15 55.2 0.0 7.9e-15 54.4 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Peptidase_S58 PF03576.14 AID29937.1 - 0.00014 21.5 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S58 Gln-synt_C PF00120.24 AID29939.1 - 1.6e-138 461.5 0.0 2.2e-138 461.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AID29939.1 - 2e-31 107.5 1.4 4.1e-31 106.6 1.4 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain P-II PF00543.22 AID29940.1 - 6e-43 145.6 1.7 6.8e-43 145.4 1.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.8 AID29940.1 - 0.002 18.2 0.1 0.0024 18.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3240) DUF190 PF02641.15 AID29940.1 - 0.012 15.9 0.1 0.017 15.4 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized ACR, COG1993 DUF2344 PF10105.9 AID29940.1 - 0.014 15.3 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) SPOUT_MTase_2 PF14419.6 AID29940.1 - 0.034 13.5 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Tae4 PF14113.6 AID29940.1 - 0.094 12.9 0.0 0.095 12.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system (T6SS), amidase effector protein 4 Carb_kinase PF01256.17 AID29942.1 - 8e-49 166.3 0.9 1.1e-48 165.8 0.9 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 AID29942.1 - 5.3e-33 114.3 0.6 1.1e-32 113.2 0.6 1.5 1 0 0 1 1 1 1 YjeF-related protein N-terminus Carboxyl_trans PF01039.22 AID29944.1 - 4.7e-188 625.8 0.5 5.3e-188 625.7 0.5 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 AID29944.1 - 0.011 15.3 0.2 0.031 13.8 0.0 1.8 2 0 0 2 2 2 0 Malonate decarboxylase gamma subunit (MdcE) NUC130_3NT PF08158.12 AID29944.1 - 0.013 15.8 0.3 0.036 14.4 0.3 1.7 1 0 0 1 1 1 0 NUC130/3NT domain DUF3408 PF11888.8 AID29944.1 - 0.057 13.6 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) OHCU_decarbox PF09349.10 AID29944.1 - 0.11 13.0 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 OHCU decarboxylase DEAD PF00270.29 AID29946.1 - 2.4e-47 161.0 0.2 9.5e-47 159.0 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AID29946.1 - 1.4e-32 112.4 0.2 4e-31 107.6 0.1 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_19 PF13245.6 AID29946.1 - 0.0014 18.9 0.2 0.042 14.2 0.1 2.2 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 AID29946.1 - 0.0057 16.7 0.0 0.0097 15.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 AID29946.1 - 0.11 11.7 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase Hydrolase_4 PF12146.8 AID29948.1 - 1.8e-09 37.3 0.1 1.9e-08 33.9 0.1 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID29948.1 - 1.2e-06 29.2 1.1 2.2e-06 28.4 1.1 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID29948.1 - 7.9e-06 25.7 0.2 0.006 16.3 0.2 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 AID29948.1 - 9.9e-05 22.3 0.0 0.0026 17.6 0.0 2.2 1 1 0 1 1 1 1 Serine hydrolase BAAT_C PF08840.11 AID29948.1 - 0.022 14.7 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.13 AID29948.1 - 0.081 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF1057 PF06342.12 AID29948.1 - 0.25 10.4 0.0 0.34 9.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) adh_short PF00106.25 AID29949.1 - 2.5e-43 147.8 0.0 3.3e-43 147.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID29949.1 - 1e-30 107.1 0.0 1.2e-30 106.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID29949.1 - 4.7e-12 46.2 0.0 6e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 AID29949.1 - 0.0058 16.0 0.0 0.14 11.5 0.0 2.0 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 AID29949.1 - 0.0084 15.6 0.0 0.023 14.2 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID29949.1 - 0.014 15.3 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding 3Beta_HSD PF01073.19 AID29949.1 - 0.054 12.5 0.0 0.075 12.0 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family GAPES2 PF17156.4 AID29949.1 - 0.18 11.6 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain PALP PF00291.25 AID29950.1 - 1.9e-65 221.2 0.1 2.1e-65 221.1 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme tRNA-synt_2c PF01411.19 AID29951.1 - 7.4e-07 28.0 0.0 7.4e-07 28.0 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 AID29952.1 - 1.8e-11 44.0 1.8 2.7e-11 43.4 1.8 1.3 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Rhodanese PF00581.20 AID29953.1 - 8e-29 100.3 0.0 7.1e-17 61.9 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Acetyltransf_1 PF00583.25 AID29954.1 - 1.9e-06 28.1 0.0 2.4e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID29954.1 - 9.6e-06 25.6 0.0 1.3e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID29954.1 - 0.00013 22.4 0.0 0.00019 21.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID29954.1 - 0.066 13.9 0.0 0.074 13.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain OmpA PF00691.20 AID29955.1 - 7.6e-17 61.5 0.0 1.3e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 OmpA family DUF1203 PF06718.11 AID29956.1 - 5.2e-38 129.9 0.2 6.2e-38 129.6 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1203) OMP_b-brl PF13505.6 AID29957.1 - 3.7e-42 144.5 37.3 1.3e-26 93.8 13.7 2.1 2 0 0 2 2 2 2 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 AID29957.1 - 1.2e-06 28.4 3.4 0.0015 18.3 0.0 2.7 3 1 0 3 3 3 2 OmpA-like transmembrane domain MtrB_PioB PF11854.8 AID29957.1 - 0.013 13.8 0.4 1.1 7.6 0.3 2.1 2 0 0 2 2 2 0 Putative outer membrane beta-barrel porin, MtrB/PioB Opacity PF02462.15 AID29957.1 - 0.14 12.2 4.8 2.1 8.4 0.2 3.0 2 1 0 2 2 2 0 Opacity family porin protein OMP_b-brl_2 PF13568.6 AID29957.1 - 1.1 9.2 12.0 10 6.1 0.1 4.1 2 1 0 2 2 2 0 Outer membrane protein beta-barrel domain AlaDh_PNT_C PF01262.21 AID29958.1 - 4.6e-85 284.3 2.1 6.4e-85 283.8 2.1 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 AID29958.1 - 2e-47 160.9 0.0 3.5e-47 160.1 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain Pyr_redox PF00070.27 AID29958.1 - 1.2e-08 35.4 0.2 1e-06 29.2 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 AID29958.1 - 4e-07 29.6 0.1 1.4e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 AID29958.1 - 1.6e-05 24.3 0.3 5.5e-05 22.5 0.1 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 AID29958.1 - 1.8e-05 24.8 0.0 3.3e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 AID29958.1 - 0.00027 20.3 0.2 0.00049 19.4 0.2 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_2 PF03446.15 AID29958.1 - 0.001 19.3 0.6 0.0054 16.9 0.2 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 AID29958.1 - 0.0017 18.7 0.0 0.0037 17.7 0.0 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding DAO PF01266.24 AID29958.1 - 0.0028 17.3 3.9 0.0064 16.1 3.1 1.9 1 1 1 2 2 2 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID29958.1 - 0.0041 17.0 1.4 0.0086 16.0 0.4 2.0 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID29958.1 - 0.0063 16.8 0.5 0.027 14.7 0.1 2.2 2 0 0 2 2 2 1 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 AID29958.1 - 0.008 15.8 0.2 0.016 14.8 0.2 1.6 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 AID29958.1 - 0.035 13.2 0.2 0.053 12.6 0.2 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A ADH_zinc_N PF00107.26 AID29958.1 - 0.044 13.8 0.2 0.095 12.7 0.2 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase HI0933_like PF03486.14 AID29958.1 - 0.056 12.1 0.4 0.094 11.4 0.4 1.3 1 0 0 1 1 1 0 HI0933-like protein NAD_binding_8 PF13450.6 AID29958.1 - 0.087 13.1 3.3 0.13 12.5 0.7 2.7 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID29958.1 - 0.18 11.1 3.0 0.28 10.5 3.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase AsnC_trans_reg PF01037.21 AID29959.1 - 1.1e-22 79.8 0.0 1.5e-22 79.3 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID29959.1 - 3.5e-19 68.1 0.7 8e-19 66.9 0.6 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID29959.1 - 2.3e-18 65.7 0.9 2.5e-17 62.4 0.8 2.1 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR PF01047.22 AID29959.1 - 5.4e-07 29.4 0.0 1.1e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID29959.1 - 0.00029 20.7 0.0 0.00068 19.5 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID29959.1 - 0.0015 18.3 0.0 0.0071 16.1 0.0 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_1 PF00126.27 AID29959.1 - 0.0016 18.3 0.0 0.0041 17.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.12 AID29959.1 - 0.0018 18.2 0.0 0.0033 17.3 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 AID29959.1 - 0.0032 17.5 0.0 0.0057 16.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID29959.1 - 0.012 15.5 0.0 0.025 14.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 AID29959.1 - 0.012 15.6 0.0 0.029 14.4 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 AID29959.1 - 0.016 15.3 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID29959.1 - 0.048 14.0 0.0 0.089 13.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 AID29959.1 - 0.17 11.8 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB 5-FTHF_cyc-lig PF01812.20 AID29960.1 - 8.9e-25 87.6 0.0 1e-24 87.4 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Pyr_redox_2 PF07992.14 AID29962.1 - 3.2e-50 171.0 0.2 3.8e-50 170.8 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID29962.1 - 8.2e-15 55.1 2.0 1.2e-08 35.4 0.7 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID29962.1 - 3.2e-06 27.2 5.2 0.3 11.1 0.2 3.4 2 1 1 3 3 3 3 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID29962.1 - 3.7e-05 23.9 1.3 0.0026 18.0 0.0 2.8 2 1 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID29962.1 - 6.8e-05 22.3 1.6 0.013 14.8 0.0 2.8 3 0 0 3 3 3 2 FAD binding domain DAO PF01266.24 AID29962.1 - 0.0012 18.4 10.9 0.33 10.5 0.0 4.0 3 1 1 4 4 4 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID29962.1 - 0.0028 17.0 0.1 3.4 6.8 0.0 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 AID29962.1 - 0.0047 16.1 0.4 2.8 7.0 0.1 3.0 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) UDPG_MGDP_dh_N PF03721.14 AID29962.1 - 0.0069 16.0 0.1 1.8 8.1 0.0 2.2 2 0 0 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 AID29962.1 - 0.0071 15.5 1.8 1.2 8.2 0.1 3.0 2 1 1 3 3 3 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AID29962.1 - 0.0076 15.4 0.4 0.038 13.1 0.1 2.1 1 1 1 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 AID29962.1 - 0.11 11.5 4.1 1.8 7.5 0.0 3.0 3 1 1 4 4 4 0 Lycopene cyclase protein TrkA_N PF02254.18 AID29962.1 - 0.11 12.7 0.1 10 6.4 0.0 2.5 2 0 0 2 2 2 0 TrkA-N domain HI0933_like PF03486.14 AID29962.1 - 0.37 9.4 1.6 14 4.3 0.0 3.4 4 0 0 4 4 4 0 HI0933-like protein 5_nucleotid_C PF02872.18 AID29963.1 - 5e-25 88.6 0.1 1.2e-24 87.3 0.1 1.6 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 AID29963.1 - 6e-10 40.0 0.1 1.2e-09 39.0 0.1 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TAT_signal PF10518.9 AID29963.1 - 0.00028 20.6 0.9 0.00058 19.6 0.9 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence GDPD PF03009.17 AID29965.1 - 3.6e-19 69.5 0.0 4.9e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family CMAS PF02353.20 AID29967.1 - 5.8e-79 265.2 0.0 7.3e-79 264.9 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 AID29967.1 - 4.9e-14 52.8 0.0 8.9e-14 52.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID29967.1 - 1.7e-11 44.2 0.0 2.9e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID29967.1 - 2.1e-11 44.3 0.0 4e-11 43.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID29967.1 - 2.4e-10 41.0 0.0 4.1e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID29967.1 - 0.00071 19.4 0.0 0.001 18.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID29967.1 - 0.011 15.3 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain PCMT PF01135.19 AID29967.1 - 0.1 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 AID29967.1 - 0.14 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Dabb PF07876.12 AID29969.1 - 6.3e-15 55.6 0.0 7.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Stress responsive A/B Barrel Domain Toxin_31 PF08119.11 AID29970.1 - 0.31 10.8 1.5 0.87 9.4 1.3 1.8 1 1 1 2 2 2 0 Scorpion acidic alpha-KTx toxin family Glyoxalase_3 PF13468.6 AID29971.1 - 2e-26 93.2 0.5 2.4e-25 89.7 0.2 2.0 2 0 0 2 2 2 1 Glyoxalase-like domain DUF4267 PF14087.6 AID29971.1 - 0.044 13.9 0.8 0.11 12.6 0.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4267) DAHP_synth_1 PF00793.20 AID29972.1 - 1.2e-62 211.3 0.0 1.6e-62 210.9 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family Dodecin PF07311.12 AID29973.1 - 3.5e-24 84.8 2.8 3.8e-24 84.7 2.8 1.0 1 0 0 1 1 1 1 Dodecin PRC PF05239.16 AID29974.1 - 3.5e-19 68.7 0.2 4.2e-19 68.4 0.2 1.1 1 0 0 1 1 1 1 PRC-barrel domain Enolase_C PF00113.22 AID29976.1 - 3e-129 430.5 0.3 8.6e-129 429.0 0.0 1.7 2 0 0 2 2 2 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 AID29976.1 - 2.5e-58 195.9 0.2 5.2e-58 194.9 0.1 1.6 2 0 0 2 2 2 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 AID29976.1 - 2.6e-07 30.4 0.0 4e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 AID29976.1 - 0.00065 18.9 0.5 0.0014 17.8 0.1 1.7 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus DivIC PF04977.15 AID29977.1 - 2.7e-21 75.1 0.2 3.2e-21 74.9 0.2 1.1 1 0 0 1 1 1 1 Septum formation initiator E1_dh PF00676.20 AID29978.1 - 4.6e-106 354.1 0.2 5.5e-106 353.9 0.2 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 AID29978.1 - 5.1e-06 25.9 0.2 5.1e-06 25.9 0.2 1.5 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 AID29979.1 - 3.9e-50 170.0 0.5 5.6e-50 169.5 0.5 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID29979.1 - 7.6e-37 126.0 0.1 1.9e-36 124.7 0.1 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain Biotin_lipoyl PF00364.22 AID29979.1 - 1.1e-19 70.0 5.3 1.8e-19 69.3 3.7 2.2 2 0 0 2 2 2 1 Biotin-requiring enzyme QRPTase_N PF02749.16 AID29979.1 - 0.0002 21.3 0.1 1 9.4 0.0 2.6 2 0 0 2 2 2 2 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl_2 PF13533.6 AID29979.1 - 0.005 16.7 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 Biotin-lipoyl like RnfC_N PF13375.6 AID29979.1 - 0.031 14.3 0.4 0.094 12.7 0.2 2.0 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain PFOR_II PF17147.4 AID29979.1 - 0.043 14.1 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II 2-oxoacid_dh PF00198.23 AID29980.1 - 1.1e-21 77.3 0.3 1.6e-21 76.8 0.3 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Transgly_assoc PF04226.13 AID29980.1 - 2.6e-10 40.4 10.6 2.6e-10 40.4 10.6 2.1 2 0 0 2 2 2 1 Transglycosylase associated protein DUF4203 PF13886.6 AID29980.1 - 0.056 13.1 10.8 0.09 12.4 10.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) COPI_assoc PF08507.10 AID29981.1 - 0.027 14.5 6.8 0.041 13.9 6.8 1.3 1 0 0 1 1 1 0 COPI associated protein DUF5504 PF17608.2 AID29981.1 - 0.076 13.1 2.7 0.11 12.6 2.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5504) DUF3043 PF11241.8 AID29981.1 - 0.27 11.3 0.7 0.44 10.6 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2157 PF09925.9 AID29981.1 - 0.66 9.8 9.4 0.51 10.1 8.0 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4231 PF14015.6 AID29981.1 - 0.7 10.4 5.7 0.24 11.9 2.8 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF4231) Tetraspanin PF00335.20 AID29981.1 - 3.7 7.2 10.7 4.2 7.0 10.7 1.1 1 0 0 1 1 1 0 Tetraspanin family Lipase_GDSL_2 PF13472.6 AID29982.1 - 4.4e-20 72.8 0.4 5.4e-20 72.5 0.4 1.0 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID29982.1 - 7.4e-09 35.9 0.0 1e-08 35.4 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Pyr_redox_2 PF07992.14 AID29983.1 - 1.4e-68 231.3 1.6 2e-68 230.8 1.6 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID29983.1 - 4.4e-39 133.1 0.4 4.4e-39 133.1 0.4 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID29983.1 - 3.9e-20 72.2 4.8 2.3e-19 69.7 0.6 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID29983.1 - 4.8e-15 55.6 3.6 4.6e-11 42.5 0.1 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID29983.1 - 1.2e-08 34.5 7.5 2.1e-05 23.8 0.1 3.7 2 1 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 AID29983.1 - 3.1e-06 27.3 0.8 0.0035 17.6 0.1 2.8 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID29983.1 - 1.3e-05 24.7 3.8 0.015 14.6 0.0 3.1 2 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 AID29983.1 - 1.5e-05 24.5 5.7 1.7e-05 24.3 0.1 2.4 2 1 1 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.22 AID29983.1 - 4.6e-05 22.7 0.5 4.6e-05 22.7 0.5 2.7 2 2 0 2 2 2 1 Glucose inhibited division protein A DAO PF01266.24 AID29983.1 - 0.00049 19.8 5.1 0.33 10.5 0.1 3.2 2 1 0 3 3 3 2 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 AID29983.1 - 0.0027 17.1 1.5 0.054 12.9 0.1 2.9 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0933_like PF03486.14 AID29983.1 - 0.007 15.1 8.1 0.046 12.4 0.1 3.4 3 1 1 4 4 4 2 HI0933-like protein Thi4 PF01946.17 AID29983.1 - 0.012 14.9 0.9 0.036 13.3 0.0 2.3 3 0 0 3 3 3 0 Thi4 family AlaDh_PNT_C PF01262.21 AID29983.1 - 0.012 14.9 3.4 0.064 12.5 1.2 2.5 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 AID29983.1 - 0.014 14.3 2.7 8.1 5.2 0.1 3.1 3 0 0 3 3 3 0 Tryptophan halogenase Lycopene_cycl PF05834.12 AID29983.1 - 0.079 12.0 3.8 2.2 7.2 0.1 2.5 2 1 1 3 3 3 0 Lycopene cyclase protein Amino_oxidase PF01593.24 AID29983.1 - 0.11 11.7 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 AID29983.1 - 0.14 12.0 4.0 0.13 12.1 1.1 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Radical_SAM PF04055.21 AID29984.1 - 8.4e-13 49.0 0.0 1.3e-12 48.4 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 AID29984.1 - 1.9e-07 31.5 0.1 3.6e-07 30.6 0.1 1.4 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family Polyketide_cyc PF03364.20 AID29985.1 - 4.3e-29 101.4 0.0 4.9e-29 101.2 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 AID29985.1 - 1.3e-12 48.2 0.0 1.5e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport IspD PF01128.19 AID29986.1 - 1.4e-61 208.1 0.8 1.8e-61 207.7 0.8 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YgbB PF02542.16 AID29986.1 - 2.4e-53 180.6 0.0 4.8e-53 179.6 0.0 1.5 1 0 0 1 1 1 1 YgbB family NTP_transf_3 PF12804.7 AID29986.1 - 7.4e-10 39.4 2.1 1.2e-09 38.7 2.1 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Dus PF01207.17 AID29987.1 - 3e-91 305.7 0.0 3.6e-91 305.5 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) PEP_mutase PF13714.6 AID29987.1 - 0.001 18.6 1.6 0.0037 16.8 0.2 2.2 1 1 1 2 2 2 1 Phosphoenolpyruvate phosphomutase NanE PF04131.14 AID29987.1 - 0.0048 16.1 1.2 1.7 7.8 0.1 2.3 1 1 1 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase SOR_SNZ PF01680.17 AID29987.1 - 0.0057 16.5 1.4 0.85 9.4 0.1 2.3 1 1 1 2 2 2 2 SOR/SNZ family NMO PF03060.15 AID29987.1 - 0.051 13.0 6.4 0.14 11.5 0.6 2.3 2 0 0 2 2 2 0 Nitronate monooxygenase Peptidase_C41 PF05417.11 AID29987.1 - 0.09 12.6 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Hepatitis E cysteine protease HATPase_c PF02518.26 AID29988.1 - 1.4e-17 64.2 0.0 2.6e-17 63.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID29988.1 - 3.1e-13 49.6 0.2 6e-13 48.6 0.2 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 AID29988.1 - 3.4e-06 27.0 0.0 7.2e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 AID29988.1 - 0.053 13.4 0.0 0.21 11.5 0.0 2.0 1 1 0 1 1 1 0 GHKL domain Sigma54_activat PF00158.26 AID29989.1 - 2.6e-70 235.5 0.1 3.9e-70 234.9 0.1 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 AID29989.1 - 6.5e-25 87.9 0.0 3.9e-24 85.3 0.0 2.2 2 1 0 2 2 2 1 Sigma-54 interaction domain Response_reg PF00072.24 AID29989.1 - 8.1e-24 83.9 0.0 2.1e-23 82.6 0.0 1.7 2 0 0 2 2 2 1 Response regulator receiver domain HTH_8 PF02954.19 AID29989.1 - 1.3e-11 44.0 0.5 3.7e-11 42.6 0.5 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 AID29989.1 - 3.4e-07 30.4 0.0 8.4e-07 29.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AID29989.1 - 1.8e-05 25.2 0.1 4.7e-05 23.8 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 AID29989.1 - 8.7e-05 23.0 0.0 0.00017 22.0 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 AID29989.1 - 0.0001 22.4 0.0 0.00019 21.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) FleQ PF06490.11 AID29989.1 - 0.0025 18.1 0.0 0.0049 17.2 0.0 1.5 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ Phage_NinH PF06322.11 AID29989.1 - 0.01 15.7 0.1 0.027 14.4 0.1 1.7 1 0 0 1 1 1 0 Phage NinH protein Mg_chelatase PF01078.21 AID29989.1 - 0.014 14.8 0.1 0.84 9.0 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HTH_30 PF13556.6 AID29989.1 - 0.015 15.1 0.1 0.033 14.0 0.1 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_17 PF12728.7 AID29989.1 - 0.024 14.8 0.2 0.31 11.2 0.1 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain AAA_3 PF07726.11 AID29989.1 - 0.069 13.0 0.0 0.17 11.7 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 AID29989.1 - 0.097 12.4 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Ig_mannosidase PF17753.1 AID29989.1 - 0.13 12.0 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Ig-fold domain HATPase_c PF02518.26 AID29990.1 - 8.6e-19 68.1 0.0 2.4e-18 66.7 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID29990.1 - 1.7e-10 41.1 0.6 6.6e-10 39.2 0.1 2.4 2 0 0 2 2 2 1 HAMP domain HisKA PF00512.25 AID29990.1 - 1.6e-09 37.7 0.0 4e-09 36.4 0.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 AID29990.1 - 2.2e-09 37.3 0.0 6.5e-09 35.8 0.0 1.9 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 AID29990.1 - 4.1e-07 29.8 0.0 7.9e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 AID29990.1 - 6.7e-05 22.8 0.0 0.00035 20.5 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain PAS_9 PF13426.7 AID29990.1 - 0.00027 21.2 0.0 0.00077 19.7 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 AID29990.1 - 0.0009 19.4 0.0 0.0022 18.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 AID29990.1 - 0.055 13.7 0.0 0.21 11.9 0.0 2.1 1 1 0 1 1 1 0 PAS fold MutS_III PF05192.18 AID29990.1 - 0.069 13.4 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 MutS domain III Ysc84 PF04366.12 AID29990.1 - 0.12 12.1 0.2 0.26 11.0 0.2 1.6 1 0 0 1 1 1 0 Las17-binding protein actin regulator Sigma54_activat PF00158.26 AID29991.1 - 7.8e-51 172.1 0.3 2e-50 170.8 0.1 1.7 2 0 0 2 2 2 1 Sigma-54 interaction domain Response_reg PF00072.24 AID29991.1 - 7.4e-26 90.5 0.1 2e-25 89.1 0.1 1.8 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 AID29991.1 - 1.2e-23 83.7 0.0 2.8e-23 82.6 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 AID29991.1 - 6.1e-12 45.1 0.0 1.7e-11 43.7 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 AID29991.1 - 2.5e-06 27.5 0.1 7.4e-06 26.0 0.1 1.8 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID29991.1 - 2.5e-06 27.0 0.6 0.014 14.8 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA PF00004.29 AID29991.1 - 3.4e-06 27.5 0.1 1.2e-05 25.7 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 AID29991.1 - 0.0015 17.7 0.0 0.0035 16.5 0.0 1.5 1 1 0 1 1 1 1 MCM P-loop domain AAA_30 PF13604.6 AID29991.1 - 0.0017 18.1 0.1 0.0034 17.1 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 AID29991.1 - 0.0027 17.9 0.0 0.013 15.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) B12-binding PF02310.19 AID29991.1 - 0.0043 17.1 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 B12 binding domain AAA_25 PF13481.6 AID29991.1 - 0.0085 15.7 0.3 0.032 13.8 0.0 2.2 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 AID29991.1 - 0.016 15.6 1.3 0.053 13.9 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain DUF2576 PF10845.8 AID29991.1 - 0.018 14.7 0.0 0.17 11.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) AAA_19 PF13245.6 AID29991.1 - 0.053 13.8 1.8 0.19 12.1 0.2 2.7 2 1 0 2 2 2 0 AAA domain HGD-D PF06050.13 AID29991.1 - 0.06 13.1 0.0 0.28 10.9 0.0 1.9 2 1 0 2 2 2 0 2-hydroxyglutaryl-CoA dehydratase, D-component FleQ PF06490.11 AID29991.1 - 0.11 12.9 0.0 0.71 10.3 0.0 2.2 2 0 0 2 2 2 0 Flagellar regulatory protein FleQ AAA_PrkA PF08298.11 AID29991.1 - 0.11 11.4 0.0 2.5 6.9 0.0 2.1 1 1 1 2 2 2 0 PrkA AAA domain AAA_22 PF13401.6 AID29991.1 - 0.12 12.7 0.1 1.4 9.1 0.1 2.5 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID29991.1 - 0.12 12.1 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Aminotran_4 PF01063.19 AID29992.1 - 5.3e-46 157.3 0.0 6.1e-46 157.1 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Hfq PF17209.3 AID29993.1 - 1.8e-32 110.8 0.1 2.1e-32 110.6 0.1 1.1 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 AID29993.1 - 0.027 14.1 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 LSM domain GTP-bdg_M PF16360.5 AID29994.1 - 1.2e-28 99.5 7.0 2.8e-28 98.3 7.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 AID29994.1 - 2.3e-28 98.7 0.1 6.5e-28 97.2 0.0 1.8 2 0 0 2 2 2 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 AID29994.1 - 1.7e-21 76.5 0.0 1e-20 73.9 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 AID29994.1 - 7.6e-05 22.8 0.0 0.00062 19.9 0.0 2.3 2 1 1 3 3 3 1 Dynamin family FeoB_N PF02421.18 AID29994.1 - 0.0004 19.9 0.0 0.00089 18.8 0.0 1.7 1 0 0 1 1 1 1 Ferrous iron transport protein B AAA_16 PF13191.6 AID29994.1 - 0.00069 20.0 0.2 0.0014 19.0 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID29994.1 - 0.0049 16.8 0.0 0.065 13.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 AID29994.1 - 0.014 15.9 0.0 0.047 14.2 0.0 2.1 1 1 1 2 2 2 0 ABC transporter AAA_33 PF13671.6 AID29994.1 - 0.018 15.2 0.1 0.41 10.8 0.0 2.5 2 1 0 2 2 2 0 AAA domain IFP_35_N PF07334.13 AID29994.1 - 0.025 14.7 0.1 0.051 13.6 0.1 1.4 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus cobW PF02492.19 AID29994.1 - 0.055 13.1 1.0 7.2 6.2 0.1 2.5 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 AID29994.1 - 0.068 12.6 0.0 0.22 10.9 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein SRPRB PF09439.10 AID29994.1 - 0.13 11.7 0.0 0.36 10.2 0.0 1.7 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_23 PF13476.6 AID29994.1 - 0.25 11.8 0.1 0.25 11.8 0.1 2.2 1 1 1 2 2 2 0 AAA domain DUF3006 PF11213.8 AID29995.1 - 0.003 17.7 0.1 0.0045 17.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) DUF3134 PF11332.8 AID29995.1 - 0.058 13.7 0.1 0.074 13.4 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3134) MazG PF03819.17 AID29996.1 - 8.8e-40 134.7 0.1 7.1e-28 96.6 0.0 2.4 2 0 0 2 2 2 2 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 AID29996.1 - 2.3e-12 47.2 0.5 9.4e-06 26.0 0.1 2.4 2 0 0 2 2 2 2 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 AID29996.1 - 0.023 15.0 0.2 0.33 11.2 0.0 2.5 2 0 0 2 2 2 0 MazG-like family DUF4363 PF14276.6 AID29996.1 - 0.19 11.8 1.2 21 5.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Aminotran_1_2 PF00155.21 AID29997.1 - 8.1e-71 239.1 0.0 9.2e-71 238.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II His_Phos_1 PF00300.22 AID29998.1 - 2.2e-30 105.8 0.2 2.4e-30 105.7 0.2 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Sigma70_r2 PF04542.14 AID29999.1 - 3.2e-18 65.2 0.8 5.7e-18 64.5 0.8 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID29999.1 - 9.8e-12 44.4 0.0 1.7e-11 43.6 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID29999.1 - 1.2e-06 27.9 0.0 2.2e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID29999.1 - 0.00011 22.2 0.9 0.00015 21.7 0.9 1.2 1 0 0 1 1 1 1 ECF sigma factor HTH_psq PF05225.16 AID29999.1 - 0.0047 16.6 0.1 0.0091 15.7 0.1 1.5 1 0 0 1 1 1 1 helix-turn-helix, Psq domain UTP15_C PF09384.10 AID30000.1 - 0.17 11.5 0.1 0.28 10.8 0.1 1.2 1 0 0 1 1 1 0 UTP15 C terminal Bax1-I PF01027.20 AID30001.1 - 6.7e-61 205.7 32.0 7.6e-61 205.6 32.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 AID30001.1 - 0.64 9.5 27.7 1.1 8.8 27.7 1.4 1 1 0 1 1 1 0 Bax inhibitor 1 like RELT PF12606.8 AID30001.1 - 2.1 7.4 6.1 0.49 9.4 0.1 3.0 3 0 0 3 3 3 0 Tumour necrosis factor receptor superfamily member 19 RseC_MucC PF04246.12 AID30001.1 - 9.5 6.2 13.3 14 5.6 0.9 2.5 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Aldose_epim PF01263.20 AID30002.1 - 7.6e-38 130.5 0.0 9.2e-38 130.2 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF4432 PF14486.6 AID30002.1 - 0.024 13.5 0.0 0.044 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) F420_oxidored PF03807.17 AID30003.1 - 4.6e-07 30.3 0.0 5.3e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent P5CR_dimer PF14748.6 AID30004.1 - 0.00068 19.8 0.0 0.00092 19.4 0.0 1.2 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation Arginase PF00491.21 AID30005.1 - 2.9e-56 191.1 0.6 3.3e-56 190.8 0.6 1.0 1 0 0 1 1 1 1 Arginase family cNMP_binding PF00027.29 AID30007.1 - 1.3e-16 60.4 0.0 2.7e-16 59.4 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 AID30007.1 - 1.6e-15 56.8 0.1 3.1e-15 55.9 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Crp PF00325.20 AID30007.1 - 2e-05 24.1 0.0 3.4e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_29 PF13551.6 AID30007.1 - 0.031 14.3 0.1 0.089 12.8 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn helix Haem_oxygenas_2 PF14518.6 AID30009.1 - 9.9e-10 38.5 0.7 1.2e-09 38.2 0.7 1.1 1 0 0 1 1 1 1 Iron-containing redox enzyme Ferritin PF00210.24 AID30009.1 - 0.081 12.9 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Ferritin-like domain DUF3140 PF11338.8 AID30010.1 - 0.11 12.9 0.0 0.13 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3140) Guanylate_cyc PF00211.20 AID30011.1 - 1.4e-28 99.8 0.0 2.3e-28 99.0 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain AAA_16 PF13191.6 AID30011.1 - 3.6e-24 86.0 0.0 3.1e-23 83.0 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain TPR_12 PF13424.6 AID30011.1 - 4.8e-07 30.0 12.3 0.065 13.5 0.0 5.7 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID30011.1 - 4.9e-06 26.2 5.2 0.95 9.7 0.0 6.7 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_19 PF14559.6 AID30011.1 - 0.0018 18.7 15.4 0.0054 17.2 1.3 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat AAA_22 PF13401.6 AID30011.1 - 0.0032 17.7 0.0 0.012 15.9 0.0 2.0 2 1 0 2 2 1 1 AAA domain TPR_4 PF07721.14 AID30011.1 - 0.0039 17.7 28.0 0.72 10.6 0.0 9.0 7 0 0 7 7 7 2 Tetratricopeptide repeat DZR PF12773.7 AID30011.1 - 0.01 15.8 0.6 0.019 15.0 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 AID30011.1 - 0.056 12.9 0.8 0.097 12.1 0.8 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zf-RanBP PF00641.18 AID30011.1 - 0.14 11.5 2.6 0.26 10.6 2.6 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others ATPase_2 PF01637.18 AID30011.1 - 0.23 11.3 0.0 0.56 10.1 0.0 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea TPR_14 PF13428.6 AID30011.1 - 0.63 11.0 0.1 0.63 11.0 0.1 9.5 10 1 1 11 11 9 0 Tetratricopeptide repeat Lactamase_B_2 PF12706.7 AID30012.1 - 1.6e-36 125.7 1.1 2e-36 125.4 1.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AID30012.1 - 1.3e-10 41.7 4.3 1.3e-10 41.7 4.3 2.2 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily TatD_DNase PF01026.21 AID30013.1 - 3.9e-79 265.6 0.0 4.3e-79 265.5 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase tRNA-synt_1g PF09334.11 AID30014.1 - 1.4e-110 369.7 0.1 1.7e-108 362.9 0.1 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 AID30014.1 - 1.5e-28 99.5 0.6 1.2e-14 53.5 0.0 3.7 1 1 3 4 4 4 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 AID30014.1 - 4.7e-12 45.9 0.0 9.3e-06 25.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AID30014.1 - 1.6e-05 24.0 0.0 0.025 13.5 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) Herpes_ICP4_N PF03584.15 AID30014.1 - 0.043 13.7 0.1 0.15 11.9 0.0 1.9 2 0 0 2 2 2 0 Herpesvirus ICP4-like protein N-terminal region Anticodon_1 PF08264.13 AID30014.1 - 0.046 13.7 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA SpoVS PF04232.12 AID30014.1 - 0.073 12.8 0.2 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) DNA_pol3_delta2 PF13177.6 AID30015.1 - 3.8e-39 134.1 0.0 5.6e-39 133.5 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 AID30015.1 - 1.2e-05 25.8 0.0 4.5e-05 23.9 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID30015.1 - 0.00049 20.5 1.8 0.0039 17.6 0.0 2.7 2 2 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 AID30015.1 - 0.0027 17.3 0.1 0.37 10.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 AID30015.1 - 0.016 15.0 0.1 0.072 12.8 0.0 2.0 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 AID30015.1 - 0.018 15.0 0.0 0.14 12.2 0.0 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 AID30015.1 - 0.03 14.6 0.0 0.28 11.5 0.0 2.5 2 1 0 2 2 2 0 AAA domain AAA_14 PF13173.6 AID30015.1 - 0.031 14.3 0.0 0.16 12.0 0.0 2.2 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID30015.1 - 0.078 13.4 0.0 0.2 12.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.17 AID30016.1 - 3.7e-47 160.4 0.0 4.6e-47 160.1 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 AID30016.1 - 1e-07 32.3 0.0 2e-07 31.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 AID30016.1 - 7.1e-05 23.3 0.0 0.048 14.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 AID30016.1 - 0.0075 16.4 0.4 0.14 12.3 0.4 2.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 AID30016.1 - 0.022 14.4 0.1 0.064 12.9 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain KAP_NTPase PF07693.14 AID30016.1 - 0.039 13.2 0.0 0.048 12.9 0.0 1.0 1 0 0 1 1 1 0 KAP family P-loop domain Peptidase_S11 PF00768.20 AID30017.1 - 4.1e-56 190.1 0.0 6.2e-56 189.5 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 AID30017.1 - 3.6e-19 68.8 0.0 7e-19 67.9 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 AID30017.1 - 1.2e-08 34.8 0.0 2e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 AID30017.1 - 0.023 13.4 0.1 0.038 12.7 0.1 1.3 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family DPBB_1 PF03330.18 AID30018.1 - 1.1e-24 86.5 0.0 2.9e-24 85.2 0.0 1.7 2 0 0 2 2 2 1 Lytic transglycolase PAS_8 PF13188.7 AID30018.1 - 0.081 13.0 0.0 0.23 11.6 0.0 1.8 1 0 0 1 1 1 0 PAS domain MerR_1 PF13411.6 AID30019.1 - 0.0044 17.1 0.0 0.022 14.8 0.0 2.0 2 1 0 2 2 2 1 MerR HTH family regulatory protein DSBA PF01323.20 AID30019.1 - 0.17 11.7 0.0 2.3 8.0 0.0 2.2 2 0 0 2 2 2 0 DSBA-like thioredoxin domain DUF2330 PF10092.9 AID30020.1 - 0.0035 16.5 0.0 0.0042 16.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2330) P_C PF06640.11 AID30020.1 - 0.084 13.0 0.3 1.7 8.7 0.1 2.1 1 1 1 2 2 2 0 P protein C-terminus Flu_PA PF00603.17 AID30020.1 - 0.13 10.4 0.0 1.2 7.1 0.1 1.9 1 1 1 2 2 2 0 Influenza RNA-dependent RNA polymerase subunit PA DUF1289 PF06945.13 AID30022.1 - 9.4e-08 31.7 0.0 9.4e-08 31.7 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1289) MFS_1 PF07690.16 AID30027.1 - 4e-60 203.6 67.0 1.9e-53 181.6 43.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 AID30027.1 - 2.2e-08 33.0 14.7 2.2e-08 33.0 14.7 2.2 2 0 0 2 2 2 1 Transmembrane secretion effector Sugar_tr PF00083.24 AID30027.1 - 0.0023 16.8 3.3 0.0023 16.8 3.3 3.5 3 1 1 4 4 4 2 Sugar (and other) transporter OATP PF03137.20 AID30027.1 - 0.012 13.9 6.3 0.056 11.7 0.2 3.2 2 2 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family ARL6IP6 PF15062.6 AID30027.1 - 0.14 12.3 0.0 0.43 10.7 0.0 1.9 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix MFS_1_like PF12832.7 AID30027.1 - 0.16 10.8 3.3 0.29 9.9 3.3 1.4 1 0 0 1 1 1 0 MFS_1 like family LysR_substrate PF03466.20 AID30028.1 - 3.2e-27 95.3 2.3 3.2e-27 95.3 2.3 1.8 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID30028.1 - 9.1e-16 57.6 0.6 2e-15 56.4 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Pcc1 PF09341.10 AID30028.1 - 0.1 12.8 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Transcription factor Pcc1 LptE PF04390.12 AID30028.1 - 0.14 12.9 0.3 0.23 12.1 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide-assembly FA_hydroxylase PF04116.13 AID30031.1 - 2.4e-28 99.1 10.0 2.4e-28 99.1 10.0 1.4 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily Abhydrolase_1 PF00561.20 AID30032.1 - 5.8e-24 85.1 0.4 1.5e-18 67.4 0.2 2.2 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID30032.1 - 5.4e-18 66.4 3.7 5e-17 63.2 3.7 2.0 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID30032.1 - 6.9e-17 61.5 1.3 1.5e-13 50.6 1.3 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 FSH1 PF03959.13 AID30032.1 - 0.00039 20.1 0.0 0.00073 19.3 0.0 1.4 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 AID30032.1 - 0.00046 19.9 0.0 0.16 11.6 0.0 2.1 2 0 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.16 AID30032.1 - 0.0056 16.5 1.0 0.085 12.7 0.0 2.7 3 0 0 3 3 3 1 Phospholipase/Carboxylesterase Ndr PF03096.14 AID30032.1 - 0.0083 14.9 0.0 0.011 14.4 0.0 1.1 1 0 0 1 1 1 1 Ndr family BAAT_C PF08840.11 AID30032.1 - 0.0099 15.8 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 AID30032.1 - 0.023 14.2 0.6 1 8.8 0.1 2.5 2 2 0 2 2 2 0 Prolyl oligopeptidase family Ser_hydrolase PF06821.13 AID30032.1 - 0.027 14.3 0.0 0.055 13.3 0.0 1.7 1 1 0 1 1 1 0 Serine hydrolase DLH PF01738.18 AID30032.1 - 0.04 13.5 0.2 0.24 10.9 0.0 2.0 2 0 0 2 2 2 0 Dienelactone hydrolase family Esterase PF00756.20 AID30032.1 - 0.11 12.1 0.0 0.24 11.0 0.0 1.6 1 1 0 1 1 1 0 Putative esterase DUF2161 PF09929.9 AID30033.1 - 1.6e-05 25.0 0.1 2.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 Putative PD-(D/E)XK phosphodiesterase (DUF2161) CAP_N PF01213.19 AID30034.1 - 0.056 12.9 11.0 0.055 12.9 11.0 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 AID30034.1 - 0.6 10.1 8.4 0.58 10.2 8.4 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 AID30034.1 - 0.81 9.7 12.3 0.91 9.6 12.3 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF2161 PF09929.9 AID30035.1 - 8.6e-13 48.4 0.0 9.8e-13 48.2 0.0 1.1 1 0 0 1 1 1 1 Putative PD-(D/E)XK phosphodiesterase (DUF2161) DUF930 PF06059.12 AID30036.1 - 6.3e-37 126.1 0.0 7.5e-37 125.9 0.0 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF930) TerC PF03741.16 AID30037.1 - 6.2e-44 149.8 11.6 7.3e-44 149.6 11.6 1.1 1 0 0 1 1 1 1 Integral membrane protein TerC family Bac_export_2 PF01312.19 AID30037.1 - 0.049 12.8 0.1 0.049 12.8 0.1 2.1 2 1 0 2 2 2 0 FlhB HrpN YscU SpaS Family TMEM100 PF16311.5 AID30037.1 - 0.084 12.5 0.2 0.26 10.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane protein 100 DUF2085 PF09858.9 AID30037.1 - 0.22 12.0 8.0 4.6 7.8 0.4 2.7 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) DUF4381 PF14316.6 AID30037.1 - 0.27 11.5 0.1 0.27 11.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) DUF4131 PF13567.6 AID30037.1 - 0.4 10.3 8.5 0.2 11.3 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DsbD PF02683.15 AID30037.1 - 0.63 9.9 9.0 0.057 13.3 1.1 2.4 2 1 1 3 3 3 0 Cytochrome C biogenesis protein transmembrane region DUF3262 PF11660.8 AID30037.1 - 8.8 6.8 11.7 20 5.6 0.0 3.6 3 1 0 3 3 3 0 Protein of unknown function (DUF3262) Radical_SAM PF04055.21 AID30038.1 - 3.3e-28 99.2 0.0 1.4e-27 97.1 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 AID30038.1 - 2.1e-19 69.4 0.0 3.7e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM_2 PF18693.1 AID30038.1 - 5.8e-19 68.0 0.1 1e-18 67.2 0.1 1.4 1 0 0 1 1 1 1 TRAM domain TRAM PF01938.20 AID30038.1 - 0.0003 20.7 0.0 0.00099 19.1 0.0 1.9 1 1 0 1 1 1 1 TRAM domain Bmp PF02608.14 AID30039.1 - 2.4e-48 164.7 0.0 3e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like BPD_transp_2 PF02653.16 AID30040.1 - 4.5e-35 121.1 35.6 5.6e-35 120.8 35.6 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID30041.1 - 5.2e-48 163.5 25.5 5.2e-48 163.5 25.5 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Caveolin PF01146.17 AID30041.1 - 0.39 10.7 6.2 9.6 6.2 1.5 2.5 2 0 0 2 2 2 0 Caveolin ABC_tran PF00005.27 AID30042.1 - 8e-39 133.3 0.0 1.6e-30 106.4 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID30042.1 - 0.00016 21.6 1.4 0.56 10.0 0.1 2.6 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID30042.1 - 0.00023 21.6 0.1 0.00081 19.8 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID30042.1 - 0.0011 18.9 0.6 0.0034 17.3 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 AID30042.1 - 0.0016 18.2 0.0 0.0048 16.6 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID30042.1 - 0.03 14.6 0.2 0.37 11.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 AID30042.1 - 0.036 13.7 0.0 0.079 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID30042.1 - 0.057 13.9 0.2 0.12 12.9 0.2 1.4 1 0 0 1 1 1 0 AAA domain ADH_zinc_N PF00107.26 AID30043.1 - 8.7e-29 100.1 0.0 1.4e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID30043.1 - 3.1e-21 76.8 0.0 4.9e-21 76.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID30043.1 - 1.4e-08 34.6 0.0 2.6e-08 33.7 0.0 1.5 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain CDP-OH_P_transf PF01066.21 AID30044.1 - 3.6e-06 27.7 0.0 3.6e-06 27.7 0.0 3.2 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF1326 PF07040.11 AID30045.1 - 2.5e-50 171.0 0.0 2.8e-50 170.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1326) DUF2182 PF09948.9 AID30046.1 - 1.1e-55 188.5 20.5 1.1e-55 188.5 20.5 1.5 2 0 0 2 2 2 1 Predicted metal-binding integral membrane protein (DUF2182) Holin_BhlA PF10960.8 AID30046.1 - 0.22 11.5 1.0 0.44 10.6 1.0 1.4 1 0 0 1 1 1 0 BhlA holin family FAD_binding_3 PF01494.19 AID30047.1 - 1.2e-27 97.0 0.0 1.7e-27 96.6 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 AID30047.1 - 1.4e-07 30.8 0.1 0.0033 16.4 0.0 2.0 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 AID30047.1 - 5.9e-06 25.7 0.0 0.0028 17.0 0.0 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID30047.1 - 0.0047 16.1 0.4 0.0089 15.1 0.4 1.4 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 AID30047.1 - 0.0068 15.5 0.1 0.0092 15.1 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 AID30047.1 - 0.073 12.4 0.3 0.1 11.9 0.3 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 AID30047.1 - 0.088 11.8 0.3 5.3 6.0 0.1 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 AID30047.1 - 0.13 12.7 0.0 0.35 11.3 0.0 1.8 2 1 0 2 2 2 0 Putative NAD(P)-binding HI0933_like PF03486.14 AID30047.1 - 0.16 10.7 0.4 0.27 9.9 0.4 1.3 1 0 0 1 1 1 0 HI0933-like protein YccV-like PF08755.11 AID30048.1 - 2.3e-27 95.3 0.0 2.8e-27 95.1 0.0 1.0 1 0 0 1 1 1 1 Hemimethylated DNA-binding protein YccV like IalB PF06776.12 AID30049.1 - 1.6e-36 125.2 0.0 2.2e-36 124.8 0.0 1.2 1 0 0 1 1 1 1 Invasion associated locus B (IalB) protein SBP_bac_5 PF00496.22 AID30050.1 - 1.8e-67 227.9 0.3 2.5e-67 227.5 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PAM2 PF07145.15 AID30050.1 - 3 7.8 4.2 2.5 8.0 0.0 2.7 3 0 0 3 3 3 0 Ataxin-2 C-terminal region DSBA PF01323.20 AID30051.1 - 2.8e-56 190.4 0.0 3.2e-56 190.2 0.0 1.0 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 AID30051.1 - 0.0012 18.5 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 AID30051.1 - 0.0013 18.9 0.0 0.073 13.2 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_3 PF13192.6 AID30051.1 - 0.0017 18.4 0.1 0.012 15.6 0.0 2.2 2 0 0 2 2 2 1 Thioredoxin domain AP_endonuc_2 PF01261.24 AID30051.1 - 0.028 13.9 0.2 0.15 11.5 0.1 2.0 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Hydrolase_like PF13242.6 AID30051.1 - 0.099 12.7 0.3 0.92 9.6 0.1 2.1 1 1 1 2 2 2 0 HAD-hyrolase-like ABC_tran PF00005.27 AID30052.1 - 5e-19 69.2 0.0 9.3e-19 68.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane_2 PF06472.15 AID30052.1 - 6.4e-14 52.0 0.1 9.6e-14 51.4 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 SMC_N PF02463.19 AID30052.1 - 0.0024 17.3 0.0 1.1 8.6 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 AID30052.1 - 0.018 15.0 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 AID30052.1 - 0.018 15.4 0.0 0.041 14.3 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 AID30052.1 - 0.04 13.7 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 AID30052.1 - 0.04 13.7 0.1 0.96 9.2 0.0 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 AID30052.1 - 0.12 12.6 0.3 2.4 8.5 0.3 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA PF00004.29 AID30052.1 - 0.13 12.7 0.1 0.53 10.7 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PduV-EutP PF10662.9 AID30052.1 - 0.15 11.8 0.1 1 9.1 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MgtE PF01769.16 AID30053.1 - 3.8e-29 101.6 3.7 7.7e-29 100.6 3.7 1.5 1 0 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.17 AID30053.1 - 2.1e-20 73.2 0.4 4.6e-20 72.1 0.4 1.6 1 0 0 1 1 1 1 MgtE intracellular N domain CBS PF00571.28 AID30053.1 - 1.6e-10 41.3 9.0 1.8e-06 28.3 1.2 3.5 4 0 0 4 4 4 2 CBS domain GAF PF01590.26 AID30053.1 - 0.14 12.8 0.0 0.37 11.4 0.0 1.8 1 0 0 1 1 1 0 GAF domain Pyr_redox_2 PF07992.14 AID30054.1 - 6.4e-63 212.7 0.1 7.8e-63 212.4 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID30054.1 - 1.6e-31 108.8 0.1 4.2e-31 107.5 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID30054.1 - 3.4e-19 69.2 3.0 2.7e-16 59.9 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID30054.1 - 2.1e-09 37.1 0.3 8.8e-08 31.8 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID30054.1 - 9.5e-06 24.6 1.1 0.73 8.5 0.9 3.1 3 0 0 3 3 3 3 HI0933-like protein FAD_oxidored PF12831.7 AID30054.1 - 1.5e-05 24.6 0.3 6.7e-05 22.4 0.1 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 AID30054.1 - 0.00043 20.3 0.7 0.02 14.9 0.0 2.7 3 0 0 3 3 3 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 AID30054.1 - 0.013 14.6 3.6 1.3 8.0 2.8 3.0 3 0 0 3 3 3 0 FAD binding domain AlaDh_PNT_C PF01262.21 AID30054.1 - 0.023 14.0 1.2 0.1 11.9 0.3 2.3 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 AID30054.1 - 0.059 12.5 1.2 0.098 11.7 0.6 1.6 2 0 0 2 2 2 0 Glucose inhibited division protein A DAO PF01266.24 AID30054.1 - 0.4 10.2 4.9 2.3 7.7 0.0 2.5 3 0 0 3 3 3 0 FAD dependent oxidoreductase DUF2059 PF09832.9 AID30055.1 - 2.3e-17 62.8 0.3 1.5e-16 60.2 0.0 2.5 3 1 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2059) GAD PF02938.14 AID30055.1 - 0.075 13.3 0.1 0.18 12.0 0.1 1.7 1 0 0 1 1 1 0 GAD domain Rib_5-P_isom_A PF06026.14 AID30056.1 - 1.2e-61 207.3 0.0 1.5e-61 207.0 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 AID30056.1 - 6.4e-07 29.4 0.1 0.00016 21.6 0.1 2.4 2 0 0 2 2 2 2 DeoR C terminal sensor domain Shikimate_DH PF01488.20 AID30056.1 - 0.02 14.9 0.0 0.044 13.8 0.0 1.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase HAD_2 PF13419.6 AID30057.1 - 2.8e-35 122.0 0.0 3.4e-35 121.7 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID30057.1 - 9.7e-23 81.6 0.0 1.3e-22 81.1 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID30057.1 - 3.6e-12 47.1 0.7 4.7e-12 46.7 0.7 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID30057.1 - 1.8e-10 40.7 0.1 3.3e-10 39.9 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 AID30057.1 - 0.00011 22.0 0.4 0.36 10.5 0.0 3.0 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID30057.1 - 0.00042 20.4 0.1 0.0046 17.0 0.1 2.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase NIF PF03031.18 AID30057.1 - 0.0028 17.4 0.0 0.027 14.2 0.0 2.0 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase Acid_PPase PF12689.7 AID30057.1 - 0.025 14.4 0.0 0.15 11.9 0.0 2.2 1 1 0 1 1 1 0 Acid Phosphatase Peripla_BP_4 PF13407.6 AID30057.1 - 0.056 13.0 0.1 0.29 10.6 0.0 1.9 2 0 0 2 2 2 0 Periplasmic binding protein domain S6PP PF05116.13 AID30057.1 - 0.12 11.8 0.1 2.6 7.5 0.1 2.3 2 1 1 3 3 3 0 Sucrose-6F-phosphate phosphohydrolase PepSY_2 PF13670.6 AID30058.1 - 6.4e-11 42.1 0.1 7.5e-11 41.9 0.1 1.0 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain Peptidase_M50B PF13398.6 AID30060.1 - 5.1 6.7 16.1 17 5.0 15.0 2.0 1 1 0 1 1 1 0 Peptidase M50B-like YkuD PF03734.14 AID30061.1 - 7.7e-26 91.3 0.0 1.2e-25 90.6 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain adh_short_C2 PF13561.6 AID30062.1 - 1.9e-59 201.1 5.2 2.3e-59 200.8 5.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID30062.1 - 2.2e-53 180.6 0.9 2.6e-53 180.4 0.9 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID30062.1 - 4.8e-10 39.6 1.5 6.1e-10 39.3 1.5 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID30062.1 - 0.0002 20.9 0.5 0.00096 18.7 0.5 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 AID30062.1 - 0.062 13.9 1.3 0.13 12.8 1.3 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GDP_Man_Dehyd PF16363.5 AID30062.1 - 0.11 11.8 0.0 1.1 8.6 0.0 2.2 3 0 0 3 3 3 0 GDP-mannose 4,6 dehydratase TetR_N PF00440.23 AID30063.1 - 6.4e-14 51.5 0.4 1.1e-13 50.7 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID30063.1 - 1.7e-05 25.1 1.2 1.7e-05 25.1 1.2 1.8 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_13 PF16925.5 AID30063.1 - 0.0039 17.1 0.1 0.0091 15.9 0.1 1.6 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 AID30063.1 - 0.0063 16.7 0.5 0.017 15.3 0.5 1.8 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_17 PF17922.1 AID30063.1 - 0.066 13.3 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain T7SS_ESX_EspC PF10824.8 AID30063.1 - 0.17 12.4 0.1 0.17 12.4 0.1 2.5 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm Rhodanese PF00581.20 AID30064.1 - 4.9e-14 52.7 0.0 6.1e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Abhydrolase_6 PF12697.7 AID30065.1 - 1e-13 52.4 20.1 2.3e-12 48.0 20.1 2.1 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID30065.1 - 1e-11 44.6 7.6 3.5e-08 33.0 3.7 2.5 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID30065.1 - 5.3e-09 36.1 1.1 2.1e-07 30.9 0.9 2.1 1 1 1 2 2 2 1 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 AID30065.1 - 0.0084 16.0 0.5 0.051 13.4 0.5 2.2 1 1 0 1 1 1 1 Serine hydrolase Abhydrolase_4 PF08386.10 AID30065.1 - 0.096 12.8 0.1 0.33 11.1 0.0 1.9 2 0 0 2 2 2 0 TAP-like protein PGAP1 PF07819.13 AID30065.1 - 0.1 12.3 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 PGAP1-like protein Peptidase_S9 PF00326.21 AID30065.1 - 0.16 11.5 3.7 0.49 9.8 0.1 2.4 2 1 0 2 2 2 0 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 AID30065.1 - 0.21 11.1 0.7 1.1 8.8 0.4 2.1 2 1 0 2 2 2 0 X-Pro dipeptidyl-peptidase (S15 family) FSH1 PF03959.13 AID30065.1 - 0.22 11.1 0.0 0.64 9.6 0.0 1.7 1 1 0 2 2 2 0 Serine hydrolase (FSH1) MarR_2 PF12802.7 AID30066.1 - 3.7e-15 55.6 0.1 6.6e-15 54.8 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID30066.1 - 6.6e-15 54.8 0.2 9.7e-15 54.2 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID30066.1 - 7.4e-09 36.0 0.1 1.1e-08 35.5 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 AID30066.1 - 0.00055 19.8 0.0 0.0034 17.2 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID30066.1 - 0.00064 19.2 0.6 0.022 14.3 0.0 2.6 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID30066.1 - 0.0095 15.7 2.3 0.011 15.5 0.5 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID30066.1 - 0.03 14.3 0.1 0.046 13.7 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 AID30066.1 - 0.091 12.8 0.0 0.39 10.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix Putative_PNPOx PF01243.20 AID30067.1 - 4.7e-19 68.4 0.0 6.9e-19 67.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Qn_am_d_aII PF14930.6 AID30067.1 - 0.013 15.8 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II SH3_11 PF18103.1 AID30067.1 - 0.015 15.4 0.2 0.037 14.2 0.1 1.7 2 0 0 2 2 2 0 Retroviral integrase C-terminal SH3 domain DUF971 PF06155.12 AID30068.1 - 1.4e-26 92.9 0.0 1.7e-26 92.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF971) Mob_synth_C PF06463.13 AID30069.1 - 7.9e-39 132.5 0.0 1.2e-38 131.9 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 AID30069.1 - 6.4e-28 98.2 0.0 9.2e-28 97.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 AID30069.1 - 3.6e-11 43.5 0.0 6.1e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 AID30069.1 - 2.1e-06 27.9 0.0 5.4e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain OMP_b-brl PF13505.6 AID30071.1 - 0.021 14.9 0.6 0.023 14.8 0.6 1.2 1 0 0 1 1 1 0 Outer membrane protein beta-barrel domain EamA PF00892.20 AID30072.1 - 7.3e-13 48.9 36.1 7.8e-09 35.8 12.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 AID30072.1 - 1 8.6 11.7 4 6.7 5.8 2.0 1 1 1 2 2 2 0 Triose-phosphate Transporter family NTP_transf_3 PF12804.7 AID30073.1 - 2.3e-26 93.1 0.1 2.8e-26 92.8 0.1 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain MobB PF03205.14 AID30074.1 - 3e-51 172.8 0.0 3.6e-51 172.5 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 AID30074.1 - 0.00011 21.3 0.1 0.00017 20.7 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 AID30074.1 - 0.0029 17.5 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 NTPase CLP1_P PF16575.5 AID30074.1 - 0.0036 17.1 0.0 0.0056 16.5 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_26 PF13500.6 AID30074.1 - 0.019 14.8 0.0 0.036 13.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 AID30074.1 - 0.022 14.8 0.0 0.033 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID30074.1 - 0.025 14.2 0.0 0.052 13.1 0.0 1.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 AID30074.1 - 0.044 13.7 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CbiA PF01656.23 AID30074.1 - 0.065 13.3 0.0 0.074 13.1 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain GTP_EFTU PF00009.27 AID30074.1 - 0.092 12.3 0.1 0.17 11.4 0.1 1.5 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain TGS PF02824.21 AID30074.1 - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 TGS domain MMR_HSR1 PF01926.23 AID30074.1 - 0.12 12.5 0.1 0.15 12.1 0.1 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID30074.1 - 0.13 12.8 0.0 0.19 12.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain KTI12 PF08433.10 AID30074.1 - 0.17 11.3 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 SBP_bac_3 PF00497.20 AID30075.1 - 4e-68 229.2 0.0 4.6e-68 229.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID30075.1 - 4.1e-10 39.9 0.0 5.7e-09 36.2 0.0 2.4 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site BPD_transp_1 PF00528.22 AID30076.1 - 2.5e-18 66.5 9.9 2.5e-18 66.5 9.9 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component CcmD PF04995.14 AID30076.1 - 0.082 13.0 0.3 0.082 13.0 0.3 2.8 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) AGTRAP PF06396.11 AID30076.1 - 0.087 12.6 0.2 0.18 11.6 0.2 1.5 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) Tad PF13400.6 AID30076.1 - 0.2 12.0 0.3 0.2 12.0 0.3 3.0 3 0 0 3 3 3 0 Putative Flp pilus-assembly TadE/G-like BPD_transp_1 PF00528.22 AID30077.1 - 3.7e-21 75.7 7.6 3.7e-21 75.7 7.6 1.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component LapA_dom PF06305.11 AID30077.1 - 1.7 8.5 5.0 10 6.1 0.3 2.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain NAD_binding_2 PF03446.15 AID30078.1 - 2.3e-47 161.1 1.4 3.6e-47 160.5 1.4 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 AID30078.1 - 1.4e-34 119.0 0.1 2.4e-34 118.2 0.1 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 AID30078.1 - 1.1e-07 32.3 0.0 2.4e-07 31.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 AID30078.1 - 1.6e-07 31.5 0.0 2.5e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 AID30078.1 - 0.00021 21.0 0.0 0.00043 20.0 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 AID30078.1 - 0.00022 20.6 0.0 0.00039 19.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 AID30078.1 - 0.0019 18.1 0.1 0.0058 16.5 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 AID30078.1 - 0.018 14.9 0.3 0.27 11.1 0.1 2.4 1 1 1 2 2 2 0 NAD(P)H-binding DNA_alkylation PF08713.11 AID30079.1 - 5.4e-31 108.0 3.9 6.5e-31 107.7 3.9 1.1 1 0 0 1 1 1 1 DNA alkylation repair enzyme HEAT PF02985.22 AID30079.1 - 0.062 13.6 0.0 1.7 9.1 0.0 2.6 2 0 0 2 2 2 0 HEAT repeat Acetyltransf_1 PF00583.25 AID30080.1 - 1.6e-08 34.8 0.0 2.4e-08 34.2 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.6 AID30080.1 - 1.9e-06 27.9 0.0 3.2e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.7 AID30080.1 - 0.0084 16.5 0.0 0.012 16.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID30080.1 - 0.031 14.2 0.0 0.23 11.4 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3299 PF11736.8 AID30081.1 - 1.2e-24 86.9 0.0 1.6e-24 86.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3299) AsnC_trans_reg PF01037.21 AID30082.1 - 4.5e-23 81.0 0.1 7.7e-23 80.2 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID30082.1 - 2.8e-19 68.4 0.1 4.3e-19 67.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID30082.1 - 1.8e-18 66.0 0.7 3.2e-18 65.3 0.7 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID30082.1 - 0.00015 21.1 0.1 0.00028 20.2 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_11 PF08279.12 AID30082.1 - 0.001 19.0 0.2 0.0018 18.2 0.2 1.4 1 0 0 1 1 1 1 HTH domain HTH_DeoR PF08220.12 AID30082.1 - 0.0013 18.4 0.1 0.0026 17.5 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 AID30082.1 - 0.0031 17.5 0.1 0.0061 16.5 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 AID30082.1 - 0.0037 17.3 0.1 0.0057 16.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID30082.1 - 0.015 15.2 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 AID30082.1 - 0.016 15.0 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR PF01047.22 AID30082.1 - 0.02 14.8 0.1 0.035 14.0 0.1 1.3 1 0 0 1 1 1 0 MarR family DDRGK PF09756.9 AID30082.1 - 0.024 14.3 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain TrmB PF01978.19 AID30082.1 - 0.026 14.4 0.1 0.045 13.6 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.27 AID30082.1 - 0.045 13.7 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_27 PF13463.6 AID30082.1 - 0.045 14.2 0.2 0.075 13.5 0.2 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain GntR PF00392.21 AID30082.1 - 0.08 12.6 0.2 0.14 11.8 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family UDG PF03167.19 AID30083.1 - 1.9e-20 73.4 0.0 2.4e-20 73.1 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily RBM1CTR PF08081.11 AID30083.1 - 0.42 10.7 0.2 0.42 10.7 0.2 2.3 3 0 0 3 3 3 0 RBM1CTR (NUC064) family GST_N_3 PF13417.6 AID30084.1 - 6.9e-16 58.4 0.0 1.4e-15 57.4 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID30084.1 - 1.3e-12 47.9 0.0 2.2e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID30084.1 - 3.7e-12 46.4 0.0 7.2e-12 45.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID30084.1 - 1e-08 35.2 0.0 1.6e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID30084.1 - 0.00018 21.6 0.0 0.00026 21.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID30084.1 - 0.00031 20.7 0.2 0.00089 19.2 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_5 PF18485.1 AID30084.1 - 0.055 13.8 0.0 0.089 13.2 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain SNase PF00565.17 AID30085.1 - 1.6e-10 41.5 0.0 3.5e-10 40.3 0.0 1.6 1 1 0 1 1 1 1 Staphylococcal nuclease homologue HATPase_c PF02518.26 AID30086.1 - 1.1e-22 80.7 0.0 1.7e-22 80.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID30086.1 - 4.8e-20 71.4 0.1 1.1e-19 70.2 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID30086.1 - 0.03 14.2 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TMEM132D_C PF15706.5 AID30086.1 - 0.11 12.3 0.5 0.79 9.5 0.1 2.4 2 1 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Wzy_C PF04932.15 AID30086.1 - 0.38 10.4 2.8 0.54 9.9 0.1 2.1 2 0 0 2 2 2 0 O-Antigen ligase Acetyltransf_3 PF13302.7 AID30087.1 - 3.7e-20 73.0 0.0 4.3e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID30087.1 - 0.00091 19.4 0.0 0.0012 19.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DUF3215 PF11503.8 AID30087.1 - 0.17 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3215) DBI_PRT PF02277.17 AID30088.1 - 3.5e-85 286.2 18.5 4e-85 285.9 18.5 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase DUF1289 PF06945.13 AID30089.1 - 2.1e-21 75.4 0.4 3.6e-21 74.7 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) gag-asp_proteas PF13975.6 AID30090.1 - 1.5e-21 76.7 0.3 2.5e-21 76.1 0.3 1.4 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 AID30090.1 - 2.9e-21 75.9 0.7 1.4e-20 73.7 0.3 2.0 2 0 0 2 2 2 1 Aspartyl protease RVP PF00077.20 AID30090.1 - 0.00011 22.5 0.0 0.00021 21.5 0.0 1.5 1 1 0 1 1 1 1 Retroviral aspartyl protease Asp_protease PF09668.10 AID30090.1 - 0.028 14.2 0.0 0.042 13.7 0.0 1.3 1 0 0 1 1 1 0 Aspartyl protease Dus PF01207.17 AID30091.1 - 7.9e-73 245.2 0.0 9.4e-73 245.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Methyltransf_25 PF13649.6 AID30094.1 - 3e-08 34.3 0.0 4.4e-07 30.5 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID30094.1 - 1.3e-05 25.8 0.0 8.3e-05 23.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID30094.1 - 3.7e-05 24.4 0.0 6.5e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID30094.1 - 0.0029 17.4 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30094.1 - 0.027 14.3 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain rve PF00665.26 AID30095.1 - 6.1e-16 58.7 0.0 1.4e-15 57.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain IstB_IS21 PF01695.17 AID30096.1 - 3.6e-69 232.0 0.1 4.5e-69 231.7 0.1 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein IstB_IS21_ATP PF08483.11 AID30096.1 - 1.7e-05 24.6 2.7 3.4e-05 23.6 2.7 1.5 1 0 0 1 1 1 1 IstB-like ATP binding N-terminal AAA_25 PF13481.6 AID30096.1 - 8.2e-05 22.3 0.1 0.00019 21.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID30096.1 - 9.3e-05 22.9 0.3 0.00028 21.3 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID30096.1 - 0.0002 21.6 0.0 0.00051 20.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 AID30096.1 - 0.0013 18.2 0.0 0.003 17.0 0.0 1.6 1 0 0 1 1 1 1 PhoH-like protein AAA_18 PF13238.6 AID30096.1 - 0.0049 17.4 0.1 0.011 16.3 0.0 1.6 2 0 0 2 2 1 1 AAA domain Bac_DnaA PF00308.18 AID30096.1 - 0.0064 16.4 0.0 0.0092 15.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein Sigma54_activ_2 PF14532.6 AID30096.1 - 0.04 14.0 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_5 PF07728.14 AID30096.1 - 0.043 13.8 0.0 0.083 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID30096.1 - 0.046 13.1 0.0 0.075 12.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 AID30096.1 - 0.047 13.6 0.2 0.11 12.4 0.1 1.7 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 AID30096.1 - 0.15 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 AID30096.1 - 0.16 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_29 PF13555.6 AID30096.1 - 0.17 11.7 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Methyltransf_21 PF05050.12 AID30099.1 - 2.1e-15 57.2 0.0 3.3e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 AID30099.1 - 6.2e-07 29.4 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein tRNA_anti-codon PF01336.25 AID30099.1 - 0.0037 17.2 1.8 0.011 15.7 0.5 2.4 2 1 0 2 2 2 1 OB-fold nucleic acid binding domain V_cholerae_RfbT PF05575.11 AID30099.1 - 0.0045 16.3 0.1 0.031 13.6 0.1 2.2 1 1 0 1 1 1 1 Vibrio cholerae RfbT protein MTS PF05175.14 AID30099.1 - 0.099 12.2 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Glyco_tranf_2_4 PF13704.6 AID30100.1 - 3.1e-17 62.9 2.1 3.7e-08 33.8 0.2 2.6 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_transf_25 PF01755.17 AID30100.1 - 1.3e-16 61.1 0.0 2.6e-16 60.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Glycos_transf_2 PF00535.26 AID30100.1 - 1.6e-08 34.6 1.3 4.9e-07 29.7 0.3 3.0 3 0 0 3 3 3 1 Glycosyl transferase family 2 Anp1 PF03452.14 AID30100.1 - 2.3e-08 33.8 0.0 4.9e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Anp1 CAP59_mtransfer PF11735.8 AID30100.1 - 0.011 15.4 0.0 0.18 11.5 0.0 2.4 2 0 0 2 2 2 0 Cryptococcal mannosyltransferase 1 PAD_N PF08526.10 AID30100.1 - 0.2 12.0 0.0 0.4 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) N-terminal domain TPR_14 PF13428.6 AID30100.1 - 0.86 10.6 5.7 6.5 7.9 1.2 3.7 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 AID30100.1 - 2 8.7 8.6 27 5.2 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Glycos_transf_2 PF00535.26 AID30101.1 - 0.0016 18.3 0.0 0.0018 18.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 CgtA PF06306.11 AID30101.1 - 0.049 13.1 0.0 0.053 13.0 0.0 1.0 1 0 0 1 1 1 0 Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) Collagen PF01391.18 AID30104.1 - 4e-107 350.0 448.7 0.018 14.7 39.4 17.3 1 1 3 4 4 4 1 Collagen triple helix repeat (20 copies) DUF4347 PF14252.6 AID30104.1 - 6.4e-38 130.2 0.0 3.3e-37 127.9 0.0 2.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4347) DUF4347 PF14252.6 AID30105.1 - 5.9e-42 143.3 0.0 1.1e-41 142.5 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4347) Collagen PF01391.18 AID30106.1 - 9.1e-211 681.9 827.6 6.5e-08 32.2 25.5 31.0 2 1 3 5 5 5 3 Collagen triple helix repeat (20 copies) DUF4347 PF14252.6 AID30106.1 - 8e-43 146.1 0.0 3.5e-42 144.0 0.0 2.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4347) ABC_membrane PF00664.23 AID30108.1 - 2.7e-35 122.3 6.0 3.8e-35 121.9 6.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 AID30108.1 - 7.5e-32 110.7 0.0 1.2e-31 110.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID30108.1 - 1.5e-05 24.6 0.1 0.0012 18.3 0.0 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID30108.1 - 0.00024 21.5 0.1 0.0012 19.3 0.1 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 AID30108.1 - 0.0011 18.8 1.3 0.44 10.3 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 AID30108.1 - 0.0015 17.4 0.2 0.034 13.0 0.0 2.6 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_29 PF13555.6 AID30108.1 - 0.021 14.6 1.2 0.067 12.9 0.1 2.4 3 0 0 3 3 3 0 P-loop containing region of AAA domain AAA_22 PF13401.6 AID30108.1 - 0.033 14.5 0.3 0.31 11.3 0.3 2.3 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID30108.1 - 0.035 14.3 0.1 0.41 10.9 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 AID30108.1 - 0.11 13.1 0.0 0.34 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 AID30108.1 - 0.18 11.1 0.0 0.34 10.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin DUF87 PF01935.17 AID30108.1 - 0.19 11.8 0.1 0.34 11.0 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Biotin_lipoyl_2 PF13533.6 AID30109.1 - 7.4e-08 32.1 0.4 1.7e-07 30.9 0.4 1.7 1 1 0 1 1 1 1 Biotin-lipoyl like Peptidase_M23 PF01551.22 AID30109.1 - 0.012 15.8 0.0 0.025 14.8 0.0 1.5 1 0 0 1 1 1 0 Peptidase family M23 HlyD_D23 PF16576.5 AID30109.1 - 0.015 14.6 0.2 0.018 14.3 0.2 1.2 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Cep57_MT_bd PF06657.13 AID30109.1 - 0.021 15.3 0.0 0.061 13.8 0.0 1.8 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 TolA_bind_tri PF16331.5 AID30109.1 - 0.029 14.4 0.4 0.071 13.2 0.0 1.7 2 0 0 2 2 2 0 TolA binding protein trimerisation HlyD_3 PF13437.6 AID30109.1 - 0.045 14.5 0.0 0.11 13.2 0.0 1.7 1 1 0 1 1 1 0 HlyD family secretion protein RnfC_N PF13375.6 AID30109.1 - 0.14 12.2 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 AID30110.1 - 2.7e-08 34.4 0.0 6.2e-08 33.3 0.0 1.7 2 0 0 2 2 2 1 HlyD family secretion protein HlyD PF00529.20 AID30110.1 - 1.4e-06 28.1 0.0 4.4e-06 26.5 0.0 1.8 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 AID30110.1 - 0.034 13.4 0.0 0.048 12.9 0.0 1.2 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Sel1 PF08238.12 AID30111.1 - 8.2e-19 67.6 36.0 6.2e-07 29.9 0.1 8.0 8 1 0 8 8 8 5 Sel1 repeat TPR_5 PF12688.7 AID30111.1 - 1 9.6 6.4 8.7 6.6 0.6 2.8 2 1 1 3 3 3 0 Tetratrico peptide repeat Sel1 PF08238.12 AID30112.1 - 1.2e-31 108.4 39.2 3e-07 30.9 1.2 7.4 7 1 0 7 7 7 6 Sel1 repeat ANTAR PF03861.14 AID30112.1 - 0.15 11.9 3.4 30 4.5 0.4 3.7 3 0 0 3 3 3 0 ANTAR domain SnoaL_2 PF12680.7 AID30113.1 - 0.00028 21.5 0.2 0.00031 21.3 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain PAS_3 PF08447.12 AID30113.1 - 0.0045 17.3 0.0 0.0062 16.8 0.0 1.2 1 0 0 1 1 1 1 PAS fold DUF982 PF06169.12 AID30114.1 - 0.069 13.2 0.1 0.083 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF982) ABC_tran PF00005.27 AID30115.1 - 1e-33 116.8 0.0 1.4e-33 116.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 AID30115.1 - 5.4e-17 62.1 0.1 1e-16 61.2 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID30115.1 - 1.7e-07 31.4 0.0 0.0026 17.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30115.1 - 0.00015 21.3 0.0 0.00034 20.1 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID30115.1 - 0.00032 21.1 0.5 0.00057 20.3 0.5 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 AID30115.1 - 0.00038 20.1 0.5 0.0052 16.4 0.5 2.2 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID30115.1 - 0.00069 19.9 0.1 0.0029 17.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID30115.1 - 0.0048 16.8 0.0 0.0086 16.0 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase Sigma54_activat PF00158.26 AID30115.1 - 0.0061 16.3 0.0 0.15 11.8 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_13 PF13166.6 AID30115.1 - 0.014 14.1 0.0 0.042 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 AID30115.1 - 0.02 15.3 0.0 0.11 12.9 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID30115.1 - 0.029 14.4 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 AID30115.1 - 0.03 14.1 0.0 0.058 13.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 AID30115.1 - 0.045 13.7 0.0 0.091 12.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ATP-synt_ab PF00006.25 AID30115.1 - 0.067 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 AID30115.1 - 0.079 13.1 0.0 0.11 12.6 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Mg_chelatase PF01078.21 AID30115.1 - 0.15 11.5 0.0 0.25 10.7 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 AID30115.1 - 0.17 11.1 0.0 0.26 10.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 AID30115.1 - 0.22 11.3 0.2 0.59 9.9 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_tran PF00005.27 AID30116.1 - 9e-26 91.0 0.0 1.2e-25 90.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 AID30116.1 - 3.6e-18 65.8 0.2 6.3e-18 65.1 0.2 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID30116.1 - 4.7e-07 29.9 0.1 3.4e-06 27.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID30116.1 - 0.058 13.7 0.0 0.41 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID30116.1 - 0.13 11.1 0.6 1.1 8.0 0.2 2.4 1 1 1 2 2 2 0 Predicted ATPase of the ABC class AAA_29 PF13555.6 AID30116.1 - 0.13 12.0 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain BPD_transp_1 PF00528.22 AID30117.1 - 1.6e-26 93.2 15.1 1.6e-26 93.2 15.1 1.9 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID30117.1 - 6e-07 29.3 1.9 6e-07 29.3 1.9 2.8 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 AID30118.1 - 3.3e-35 121.5 11.9 3.3e-35 121.5 11.9 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID30119.1 - 2.8e-71 240.5 0.3 3.4e-71 240.2 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle LPAM_1 PF08139.12 AID30119.1 - 0.084 13.4 4.9 0.17 12.5 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Abhydrolase_1 PF00561.20 AID30120.1 - 1.7e-27 96.7 0.0 2e-27 96.5 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID30120.1 - 3.7e-15 57.1 1.0 4.4e-15 56.9 1.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID30120.1 - 3e-13 49.6 0.0 1.4e-10 40.9 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_M17 PF00883.21 AID30121.1 - 2.2e-108 362.2 0.0 2.7e-108 361.9 0.0 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 AID30121.1 - 5e-14 52.2 0.1 1.6e-13 50.6 0.1 1.8 1 0 0 1 1 1 1 Cytosol aminopeptidase family, N-terminal domain HTH_20 PF12840.7 AID30121.1 - 0.036 14.1 1.2 5 7.3 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain LysR_substrate PF03466.20 AID30122.1 - 1.9e-22 79.7 1.4 2.2e-22 79.5 0.4 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID30122.1 - 2.4e-18 65.8 0.2 4.3e-18 65.0 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID30122.1 - 5.6e-05 23.2 0.0 0.0034 17.5 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 AID30122.1 - 0.0006 19.3 0.1 0.0013 18.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID30122.1 - 0.00073 19.4 0.1 0.0016 18.3 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 AID30122.1 - 0.0011 18.8 0.0 0.0032 17.3 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 AID30122.1 - 0.027 14.3 0.3 0.096 12.5 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain HTH_IclR PF09339.10 AID30122.1 - 0.027 14.2 0.2 0.068 13.0 0.2 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_20 PF12840.7 AID30122.1 - 0.037 14.1 0.1 0.082 13.0 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 AID30122.1 - 0.072 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_30 PF13556.6 AID30122.1 - 0.1 12.4 0.1 0.25 11.2 0.1 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Transp_cyt_pur PF02133.15 AID30123.1 - 6.3e-72 242.7 37.7 8.5e-72 242.3 37.7 1.2 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin DUF1697 PF08002.11 AID30124.1 - 1.4e-34 119.4 0.0 1.8e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1697) Rho_N PF07498.12 AID30124.1 - 0.039 13.9 0.0 0.09 12.7 0.0 1.6 1 0 0 1 1 1 0 Rho termination factor, N-terminal domain CTP_synth_N PF06418.14 AID30125.1 - 1.2e-118 395.2 0.0 1.7e-118 394.7 0.0 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 AID30125.1 - 3.8e-53 180.1 0.0 6.1e-53 179.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AID30125.1 - 4e-08 33.3 0.0 5.6e-07 29.5 0.0 2.6 1 1 0 1 1 1 1 Peptidase C26 YkuD PF03734.14 AID30126.1 - 4.7e-14 53.0 0.1 8.2e-14 52.2 0.1 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain VSG_B PF13206.6 AID30126.1 - 6.3e-06 25.7 2.7 8.8e-06 25.2 2.7 1.1 1 0 0 1 1 1 1 Trypanosomal VSG domain SecG PF03840.14 AID30127.1 - 3.2e-18 65.6 9.6 4.5e-18 65.1 9.6 1.2 1 0 0 1 1 1 1 Preprotein translocase SecG subunit YobH PF13996.6 AID30127.1 - 0.29 11.2 1.8 0.41 10.7 1.8 1.3 1 0 0 1 1 1 0 YobH-like protein TIM PF00121.18 AID30128.1 - 8.3e-76 254.6 0.0 9.4e-76 254.4 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Pas_Saposin PF09016.10 AID30128.1 - 0.057 13.8 0.0 0.099 13.0 0.0 1.3 1 0 0 1 1 1 0 Pas factor saposin fold Lysis_col PF02402.16 AID30128.1 - 0.1 12.3 0.2 1.5 8.6 0.0 2.3 2 0 0 2 2 2 0 Lysis protein SurA_N_3 PF13624.6 AID30129.1 - 5.7e-37 127.0 4.1 7.1e-36 123.4 0.0 2.9 3 1 0 3 3 3 1 SurA N-terminal domain Rotamase_2 PF13145.6 AID30129.1 - 5.2e-36 124.1 21.0 2.8e-24 86.3 4.5 4.7 4 0 0 4 4 4 4 PPIC-type PPIASE domain SurA_N_2 PF13623.6 AID30129.1 - 8.5e-25 87.3 0.0 3.9e-24 85.2 0.0 2.2 2 0 0 2 2 2 1 SurA N-terminal domain Rotamase PF00639.21 AID30129.1 - 9.8e-05 23.2 0.3 0.0045 17.9 0.1 3.0 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 AID30129.1 - 0.042 14.4 0.3 0.23 12.0 0.1 2.5 3 0 0 3 3 3 0 PPIC-type PPIASE domain Glycos_transf_3 PF00591.21 AID30130.1 - 2.5e-95 318.9 2.3 3.7e-95 318.3 2.3 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 AID30130.1 - 9.8e-19 67.0 1.1 3.1e-18 65.4 1.1 1.9 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Fil_haemagg PF05594.14 AID30130.1 - 1.5 9.4 9.5 3.6 8.2 0.8 2.5 2 0 0 2 2 2 0 Haemagluttinin repeat IGPS PF00218.21 AID30131.1 - 7.1e-95 317.0 0.0 8e-95 316.8 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase MoaC PF01967.21 AID30132.1 - 4e-57 192.1 3.2 4.7e-57 191.9 3.2 1.0 1 0 0 1 1 1 1 MoaC family MoeA_N PF03453.17 AID30133.1 - 1.1e-40 139.0 1.2 4.4e-40 137.0 0.8 2.0 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 AID30133.1 - 1.9e-21 76.2 0.1 3.2e-21 75.5 0.1 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 AID30133.1 - 3e-18 65.7 0.0 9.2e-18 64.2 0.0 1.9 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) DUF1611_N PF17396.2 AID30133.1 - 0.3 11.4 1.5 4.4 7.6 0.5 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Abhydrolase_3 PF07859.13 AID30134.1 - 9.6e-09 35.4 0.1 1.5e-08 34.8 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID30134.1 - 8.4e-06 26.5 3.0 8.4e-06 26.5 3.0 1.9 2 0 0 2 2 2 1 Alpha/beta hydrolase family DUF2974 PF11187.8 AID30134.1 - 0.00072 19.2 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 AID30134.1 - 0.1 11.9 0.2 0.39 9.9 0.1 1.8 2 0 0 2 2 2 0 Serine aminopeptidase, S33 PGAP1 PF07819.13 AID30134.1 - 0.16 11.7 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Lipase_3 PF01764.25 AID30134.1 - 0.2 11.5 0.1 0.29 11.0 0.1 1.2 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_5 PF12695.7 AID30134.1 - 0.21 11.4 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family AMP-binding PF00501.28 AID30135.1 - 3.9e-79 266.2 0.1 4.8e-79 265.9 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID30135.1 - 2.4e-22 79.7 1.0 5.1e-22 78.7 1.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Flavi_NS4B PF01349.17 AID30135.1 - 0.1 12.0 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4B Trp_dioxygenase PF03301.13 AID30136.1 - 1.3e-68 231.9 5.2 1.7e-40 139.4 0.6 2.5 1 1 1 2 2 2 2 Tryptophan 2,3-dioxygenase Sec7_N PF12783.7 AID30136.1 - 0.015 15.2 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Aminotran_5 PF00266.19 AID30137.1 - 8.2e-17 61.2 0.0 9.7e-17 61.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AID30137.1 - 0.0023 16.5 0.0 0.0031 16.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 AID30137.1 - 0.015 14.7 0.5 0.031 13.6 0.5 1.5 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family BPD_transp_2 PF02653.16 AID30138.1 - 5.6e-48 163.4 32.4 6.4e-48 163.2 32.4 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component FeoB_associated PF12669.7 AID30138.1 - 0.54 10.7 0.2 0.54 10.7 0.2 3.0 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein ABC_tran PF00005.27 AID30139.1 - 5.2e-23 82.1 0.1 7.7e-23 81.5 0.1 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID30139.1 - 4.1e-09 36.2 1.0 1.9e-08 34.0 1.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID30139.1 - 9.8e-06 25.6 5.5 0.017 14.9 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Dynamin_N PF00350.23 AID30139.1 - 2.6e-05 24.3 0.1 9.2e-05 22.6 0.1 1.9 1 1 0 1 1 1 1 Dynamin family AAA_29 PF13555.6 AID30139.1 - 0.00026 20.7 0.9 0.00076 19.2 0.9 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30139.1 - 0.00067 19.6 0.1 0.0013 18.7 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 AID30139.1 - 0.00076 19.1 0.1 0.0015 18.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID30139.1 - 0.00082 19.9 0.0 0.0018 18.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AID30139.1 - 0.011 15.8 0.1 0.039 14.0 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_30 PF13604.6 AID30139.1 - 0.012 15.3 1.3 0.027 14.2 1.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID30139.1 - 0.027 14.0 1.0 0.078 12.5 0.1 2.0 1 1 1 2 2 2 0 AAA domain DUF2813 PF11398.8 AID30139.1 - 0.039 13.2 0.0 0.065 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_15 PF13175.6 AID30139.1 - 0.043 13.5 0.2 0.065 12.9 0.2 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AID30139.1 - 0.046 14.0 1.0 0.83 9.9 0.9 2.5 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID30139.1 - 0.066 13.5 0.1 1.1 9.5 0.1 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA PF00004.29 AID30139.1 - 0.072 13.5 0.1 0.36 11.2 0.0 2.0 2 1 1 3 3 3 0 ATPase family associated with various cellular activities (AAA) ABC_sub_bind PF04392.12 AID30140.1 - 5.1e-117 390.3 5.4 5.8e-117 390.1 5.4 1.0 1 0 0 1 1 1 1 ABC transporter substrate binding protein Peripla_BP_4 PF13407.6 AID30140.1 - 0.0003 20.4 14.4 0.0026 17.4 6.5 2.4 1 1 0 2 2 2 2 Periplasmic binding protein domain GntR PF00392.21 AID30141.1 - 1e-18 66.8 0.4 2.3e-18 65.6 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 AID30141.1 - 1.3e-14 54.6 9.5 3.6e-14 53.2 9.5 1.7 1 0 0 1 1 1 1 FCD domain LexA_DNA_bind PF01726.16 AID30142.1 - 1.9e-16 59.5 0.7 7.6e-16 57.6 0.2 2.1 2 0 0 2 2 2 1 LexA DNA binding domain Peptidase_S24 PF00717.23 AID30142.1 - 7.7e-13 48.2 0.0 1.2e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like MarR_2 PF12802.7 AID30142.1 - 0.00048 20.0 0.1 0.0011 18.8 0.1 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID30142.1 - 0.0029 17.5 0.1 0.0089 15.9 0.1 1.9 1 1 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID30142.1 - 0.0094 15.7 0.1 0.027 14.3 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_11 PF08279.12 AID30142.1 - 0.13 12.2 0.0 0.4 10.7 0.0 1.7 2 0 0 2 2 2 0 HTH domain Competence PF03772.16 AID30144.1 - 2.2e-57 194.4 21.0 2.2e-57 194.4 21.0 1.8 2 0 0 2 2 2 1 Competence protein DUF4131 PF13567.6 AID30144.1 - 1.5e-08 34.5 0.0 1.5e-08 34.5 0.0 3.8 3 1 0 3 3 3 1 Domain of unknown function (DUF4131) DUF3318 PF11780.8 AID30144.1 - 0.44 10.5 5.0 1.8 8.5 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3318) tRNA-synt_1c PF00749.21 AID30145.1 - 1.5e-92 309.9 0.0 1.8e-92 309.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain Citrate_synt PF00285.21 AID30146.1 - 1.9e-133 445.0 0.0 2.4e-133 444.7 0.0 1.1 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain LpxB PF02684.15 AID30147.1 - 1.9e-78 263.9 0.0 2.3e-78 263.7 0.0 1.0 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase LpxI_C PF06230.11 AID30148.1 - 2e-41 140.9 0.2 3e-41 140.4 0.2 1.2 1 0 0 1 1 1 1 LpxI C-terminal domain LpxI_N PF17930.1 AID30148.1 - 8.2e-33 113.1 0.1 1.2e-32 112.6 0.1 1.2 1 0 0 1 1 1 1 LpxI N-terminal domain Hexapep PF00132.24 AID30149.1 - 2.1e-23 81.1 16.0 4.6e-07 29.3 1.3 5.9 4 1 2 6 6 6 6 Bacterial transferase hexapeptide (six repeats) Acetyltransf_11 PF13720.6 AID30149.1 - 5.9e-20 71.5 0.0 9.2e-20 70.9 0.0 1.2 1 0 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Hexapep_2 PF14602.6 AID30149.1 - 2.7e-06 27.0 20.6 0.025 14.3 1.6 5.2 5 1 1 6 6 6 5 Hexapeptide repeat of succinyl-transferase FabA PF07977.13 AID30150.1 - 4.1e-40 136.6 0.0 4.7e-40 136.4 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain 4HBT PF03061.22 AID30150.1 - 0.00013 22.3 0.0 0.0002 21.7 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 AID30150.1 - 0.0051 16.4 0.0 0.0068 16.0 0.0 1.3 1 0 0 1 1 1 1 MaoC like domain Hexapep PF00132.24 AID30151.1 - 2.1e-27 93.8 38.1 5.3e-08 32.3 3.6 6.8 3 2 4 7 7 7 7 Bacterial transferase hexapeptide (six repeats) LpxD PF04613.14 AID30151.1 - 1.6e-12 47.0 0.2 3.1e-12 46.1 0.2 1.5 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Hexapep_2 PF14602.6 AID30151.1 - 1.3e-06 28.0 33.7 0.091 12.5 1.6 5.8 6 0 0 6 6 6 4 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 AID30151.1 - 0.18 9.9 9.0 0.21 9.7 1.7 2.3 1 1 1 3 3 3 0 Domain of unknown function (DUF4954) DUF4971 PF16341.5 AID30151.1 - 0.19 11.6 0.4 0.4 10.5 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4971) Bac_surface_Ag PF01103.23 AID30152.1 - 4.1e-88 296.0 4.1 6.9e-88 295.2 4.1 1.4 1 0 0 1 1 1 1 Surface antigen POTRA PF07244.15 AID30152.1 - 4.6e-65 216.2 20.2 1.1e-15 57.9 0.2 5.4 5 0 0 5 5 5 5 Surface antigen variable number repeat POTRA_1 PF08478.10 AID30152.1 - 3.2e-09 37.0 2.7 0.024 14.9 0.0 4.4 5 0 0 5 5 5 3 POTRA domain, FtsQ-type POTRA_2 PF08479.11 AID30152.1 - 0.0003 20.6 1.3 6.3 6.7 0.0 4.6 6 0 0 6 6 6 2 POTRA domain, ShlB-type TraS PF10624.9 AID30152.1 - 0.062 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Peptidase_M50 PF02163.22 AID30153.1 - 7.5e-74 248.1 0.4 8.7e-74 247.9 0.4 1.0 1 0 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 AID30153.1 - 8e-13 48.0 0.2 1.7e-12 47.0 0.0 1.7 2 0 0 2 2 2 1 PDZ domain PDZ_2 PF13180.6 AID30153.1 - 8.4e-13 48.5 0.1 1.6e-12 47.6 0.1 1.4 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 AID30153.1 - 6.9e-06 26.3 0.1 3.8e-05 24.0 0.0 2.0 1 1 1 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 AID30153.1 - 1.9e-05 24.5 0.1 4.7e-05 23.3 0.1 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain Peptidase_M50B PF13398.6 AID30153.1 - 0.018 14.7 3.5 0.026 14.2 0.4 2.3 2 0 0 2 2 2 0 Peptidase M50B-like Myosin_N PF02736.19 AID30153.1 - 0.084 12.7 0.1 0.21 11.5 0.1 1.7 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain GRASP55_65 PF04495.14 AID30153.1 - 0.09 13.1 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 GRASP55/65 PDZ-like domain MRP PF09387.10 AID30153.1 - 0.18 11.8 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP DUF2207 PF09972.9 AID30153.1 - 0.75 8.5 0.0 0.75 8.5 0.0 2.0 3 0 0 3 3 3 0 Predicted membrane protein (DUF2207) CTP_transf_1 PF01148.20 AID30154.1 - 1.4e-59 202.0 17.6 1.6e-59 201.8 17.6 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family CarS-like PF01864.17 AID30154.1 - 2 8.4 14.4 0.017 15.1 3.3 2.4 2 1 0 2 2 2 0 CDP-archaeol synthase Prenyltransf PF01255.19 AID30155.1 - 5.7e-79 264.8 0.0 6.5e-79 264.6 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase HTH_DeoR PF08220.12 AID30155.1 - 0.073 12.8 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain RRF PF01765.19 AID30156.1 - 5.6e-57 192.2 0.1 6.4e-57 192.0 0.1 1.0 1 0 0 1 1 1 1 Ribosome recycling factor AA_kinase PF00696.28 AID30157.1 - 7.6e-32 110.8 3.0 8.7e-32 110.6 3.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family Aldo_ket_red PF00248.21 AID30158.1 - 1.3e-69 234.7 0.0 1.4e-69 234.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family SnoaL_4 PF13577.6 AID30159.1 - 4.8e-17 62.3 1.8 6.2e-17 61.9 1.8 1.1 1 0 0 1 1 1 1 SnoaL-like domain LysR_substrate PF03466.20 AID30160.1 - 4.6e-26 91.5 1.3 9.6e-24 83.9 1.3 2.2 1 1 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID30160.1 - 4.3e-18 65.0 0.6 1.2e-17 63.6 0.4 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID30160.1 - 0.042 13.7 0.2 0.17 11.8 0.2 2.1 1 0 0 1 1 1 0 MarR family EF_TS PF00889.19 AID30161.1 - 2.7e-69 232.9 4.4 4.2e-69 232.3 4.4 1.3 1 0 0 1 1 1 1 Elongation factor TS UBA PF00627.31 AID30161.1 - 0.0026 17.6 0.3 0.011 15.7 0.3 2.2 1 0 0 1 1 1 1 UBA/TS-N domain HOIP-UBA PF16678.5 AID30161.1 - 0.15 12.1 0.9 0.53 10.3 0.1 2.3 3 0 0 3 3 3 0 HOIP UBA domain pair Adeno_knob PF00541.17 AID30161.1 - 0.16 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) Ribosomal_S2 PF00318.20 AID30162.1 - 2.7e-96 320.9 0.0 3.1e-96 320.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S2 RBFA PF02033.18 AID30162.1 - 0.079 13.4 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 Ribosome-binding factor A LysE PF01810.18 AID30163.1 - 1.7e-36 125.5 14.8 2e-36 125.3 14.8 1.1 1 0 0 1 1 1 1 LysE type translocator DUF4031 PF13223.6 AID30164.1 - 5.1e-31 106.7 0.1 5.8e-31 106.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4031) DUF1849 PF08904.11 AID30165.1 - 5.1e-91 304.7 1.3 5.8e-91 304.5 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1849) YjgF_endoribonc PF14588.6 AID30166.1 - 6.3e-35 120.5 0.2 7e-35 120.3 0.2 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 AID30166.1 - 8.6e-24 83.9 0.0 1.1e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP GDPD PF03009.17 AID30167.1 - 4.7e-22 79.0 0.0 1.1e-21 77.7 0.0 1.6 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family Tobravirus_2B PF05271.11 AID30167.1 - 0.071 13.0 0.0 6.4 6.7 0.0 2.3 2 0 0 2 2 2 0 Tobravirus 2B protein FemAB_like PF04339.12 AID30168.1 - 1.7e-158 527.6 0.0 2e-158 527.4 0.0 1.0 1 0 0 1 1 1 1 Peptidogalycan biosysnthesis/recognition Acetyltransf_6 PF13480.7 AID30168.1 - 2.7e-11 43.8 0.8 6.9e-11 42.5 0.8 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HIT PF01230.23 AID30169.1 - 6.1e-28 97.4 0.0 7.5e-28 97.1 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 AID30169.1 - 5.2e-13 49.5 0.0 6.6e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CPT PF07931.12 AID30170.1 - 2.1e-16 60.3 0.0 2.1e-16 60.2 0.0 1.0 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_18 PF13238.6 AID30170.1 - 0.00041 20.9 0.0 0.00041 20.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID30170.1 - 0.00055 19.3 0.0 0.00063 19.1 0.0 1.0 1 0 0 1 1 1 1 Zeta toxin KTI12 PF08433.10 AID30170.1 - 0.0015 18.1 0.0 0.0015 18.1 0.0 1.0 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 AID30170.1 - 0.0026 18.1 0.0 0.0026 18.1 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain Hydin_ADK PF17213.3 AID30170.1 - 0.0048 17.2 0.0 0.0052 17.1 0.0 1.0 1 0 0 1 1 1 1 Hydin Adenylate kinase-like domain APS_kinase PF01583.20 AID30170.1 - 0.16 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Adenylylsulphate kinase CPT PF07931.12 AID30171.1 - 8.6e-27 94.1 0.0 9.8e-27 93.9 0.0 1.0 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_2 PF07724.14 AID30172.1 - 9.6e-49 165.8 0.0 6.9e-46 156.5 0.0 3.2 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 AID30172.1 - 3e-28 97.8 0.7 6.8e-28 96.6 0.7 1.6 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 AID30172.1 - 2.6e-26 92.6 0.0 9.8e-12 45.4 0.0 3.1 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 AID30172.1 - 1.6e-24 85.7 0.0 4.2e-24 84.4 0.0 1.8 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 AID30172.1 - 6.2e-19 68.4 0.0 1.5e-12 47.7 0.0 2.8 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Clp_N PF02861.20 AID30172.1 - 1e-11 44.7 2.6 1.4e-11 44.3 1.0 2.2 2 0 0 2 2 1 1 Clp amino terminal domain, pathogenicity island component AAA_16 PF13191.6 AID30172.1 - 1.5e-11 44.9 1.8 0.00024 21.6 0.0 4.0 3 1 0 3 3 3 2 AAA ATPase domain Sigma54_activat PF00158.26 AID30172.1 - 6.4e-10 39.0 0.0 1.5e-05 24.8 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 AID30172.1 - 2.3e-08 34.4 2.2 0.0011 19.3 0.2 4.2 3 2 0 3 3 2 2 AAA domain RuvB_N PF05496.12 AID30172.1 - 1.3e-06 28.3 1.0 0.034 13.9 0.0 3.8 3 1 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 AID30172.1 - 1.4e-06 28.8 0.0 0.027 15.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 AID30172.1 - 1e-05 25.4 0.0 0.023 14.5 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein TniB PF05621.11 AID30172.1 - 1.1e-05 24.9 0.0 0.013 15.0 0.0 3.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_7 PF12775.7 AID30172.1 - 1.3e-05 24.8 0.0 0.14 11.6 0.0 3.0 3 1 0 3 3 2 2 P-loop containing dynein motor region AAA_14 PF13173.6 AID30172.1 - 3.6e-05 23.8 0.0 0.36 10.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.11 AID30172.1 - 3.7e-05 23.6 0.0 0.0081 16.0 0.0 3.4 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID30172.1 - 4.5e-05 22.9 0.0 2.1 7.7 0.0 3.3 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 AID30172.1 - 7e-05 23.0 0.0 0.033 14.3 0.0 2.7 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 AID30172.1 - 0.00011 22.5 0.0 0.22 11.9 0.0 3.1 2 1 0 2 2 2 1 RNA helicase AAA_6 PF12774.7 AID30172.1 - 0.00033 19.7 0.0 0.00067 18.7 0.0 1.5 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region ResIII PF04851.15 AID30172.1 - 0.00095 19.2 0.0 0.16 12.0 0.0 3.2 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit TsaE PF02367.17 AID30172.1 - 0.0012 18.8 0.0 0.38 10.8 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 AID30172.1 - 0.0032 16.7 0.2 0.5 9.5 0.0 2.8 2 1 1 3 3 3 1 TIP49 P-loop domain NACHT PF05729.12 AID30172.1 - 0.004 17.1 0.0 0.31 10.9 0.0 2.5 2 0 0 2 2 2 1 NACHT domain Zeta_toxin PF06414.12 AID30172.1 - 0.0044 16.3 0.0 0.37 10.0 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin AAA_28 PF13521.6 AID30172.1 - 0.0055 17.0 0.0 0.83 9.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain DNA_pol3_delta2 PF13177.6 AID30172.1 - 0.015 15.1 0.0 0.32 10.8 0.0 3.0 3 0 0 3 3 3 0 DNA polymerase III, delta subunit Torsin PF06309.11 AID30172.1 - 0.017 15.2 0.0 0.064 13.4 0.0 1.9 2 0 0 2 2 2 0 Torsin AAA_17 PF13207.6 AID30172.1 - 0.02 15.3 0.0 2.6 8.5 0.0 2.7 2 0 0 2 2 2 0 AAA domain SKI PF01202.22 AID30172.1 - 0.025 14.7 0.4 0.39 10.8 0.0 2.7 3 0 0 3 3 3 0 Shikimate kinase ATPase_2 PF01637.18 AID30172.1 - 0.028 14.4 0.1 3.1 7.6 0.1 3.2 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea IPT PF01745.16 AID30172.1 - 0.049 13.0 0.0 0.13 11.6 0.0 1.7 2 0 0 2 2 1 0 Isopentenyl transferase AAA_25 PF13481.6 AID30172.1 - 0.076 12.6 3.5 6.4 6.3 0.0 3.2 3 1 1 4 4 3 0 AAA domain Rad17 PF03215.15 AID30172.1 - 0.11 12.4 0.0 1.7 8.5 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_24 PF13479.6 AID30172.1 - 0.12 12.1 0.0 11 5.6 0.0 2.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 AID30172.1 - 0.12 12.2 0.1 16 5.3 0.0 3.2 4 0 0 4 4 2 0 NTPase ClpS PF02617.17 AID30173.1 - 1.5e-33 114.4 0.2 1.9e-33 114.1 0.2 1.2 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS Malic_M PF03949.15 AID30174.1 - 0.078 12.2 0.0 0.078 12.2 0.0 1.0 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain Phasin_2 PF09361.10 AID30175.1 - 1e-24 86.7 3.7 1.2e-24 86.5 3.7 1.0 1 0 0 1 1 1 1 Phasin protein 4HB_MCP_1 PF12729.7 AID30175.1 - 0.011 15.2 2.3 0.015 14.9 2.3 1.3 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction MSA-2c PF12238.8 AID30175.1 - 0.026 14.5 0.4 0.029 14.4 0.4 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Peptidase_S11 PF00768.20 AID30176.1 - 1.4e-55 188.3 0.1 2.2e-55 187.7 0.1 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase SPOR PF05036.13 AID30176.1 - 2e-15 56.9 1.2 8.8e-15 54.9 1.2 2.2 1 0 0 1 1 1 1 Sporulation related domain Beta-lactamase2 PF13354.6 AID30176.1 - 1.5e-09 37.8 0.1 2.6e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase enzyme family CytoC_RC PF02276.18 AID30176.1 - 0.029 13.8 0.0 0.048 13.0 0.0 1.3 1 0 0 1 1 1 0 Photosynthetic reaction centre cytochrome C subunit T2SS-T3SS_pil_N PF13629.6 AID30176.1 - 0.13 12.0 0.6 0.31 10.8 0.6 1.6 1 0 0 1 1 1 0 Pilus formation protein N terminal region DnaJ PF00226.31 AID30177.1 - 6.1e-07 29.5 0.0 1.4e-06 28.3 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain DUF3481 PF11980.8 AID30177.1 - 0.51 10.1 0.0 0.51 10.1 0.0 1.8 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein FixQ PF05545.11 AID30177.1 - 2.5 8.1 5.5 6.5 6.8 0.0 2.7 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF1489 PF07370.11 AID30178.1 - 6e-57 191.2 0.0 6.7e-57 191.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1489) SDH_alpha PF03313.15 AID30180.1 - 2.2e-100 335.6 2.6 3e-100 335.2 2.6 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 AID30180.1 - 8.5e-54 182.1 0.0 2.3e-53 180.7 0.0 1.8 1 0 0 1 1 1 1 Serine dehydratase beta chain FoP_duplication PF13865.6 AID30180.1 - 0.035 14.7 0.0 0.072 13.7 0.0 1.5 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 MmgE_PrpD PF03972.14 AID30180.1 - 0.15 10.5 4.1 0.25 9.8 4.1 1.3 1 0 0 1 1 1 0 MmgE/PrpD family FumaraseC_C PF10415.9 AID30180.1 - 0.18 12.2 0.6 0.98 9.9 0.1 2.3 2 0 0 2 2 2 0 Fumarase C C-terminus DUF599 PF04654.12 AID30181.1 - 2.5e-55 187.1 7.4 2.9e-55 187.0 7.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF599 MFS_MOT1 PF16983.5 AID30181.1 - 0.89 10.0 6.7 1.7 9.1 0.7 3.1 1 1 1 2 2 2 0 Molybdate transporter of MFS superfamily DUF218 PF02698.17 AID30182.1 - 1.6e-29 102.6 0.0 1.9e-29 102.3 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain Amidase PF01425.21 AID30183.1 - 1.1e-141 472.9 0.0 5.4e-106 355.2 0.1 2.0 1 1 0 2 2 2 2 Amidase Acetyltransf_10 PF13673.7 AID30184.1 - 1.9e-13 50.5 0.0 2.4e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID30184.1 - 2.1e-12 47.3 0.1 2.7e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID30184.1 - 3.1e-10 40.3 0.0 5.1e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID30184.1 - 4e-05 24.3 0.0 4.5e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID30184.1 - 0.0017 18.3 0.0 0.0035 17.3 0.0 1.5 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID30184.1 - 0.024 14.7 0.0 0.041 14.0 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 AID30184.1 - 0.028 14.1 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HATPase_c PF02518.26 AID30184.1 - 0.16 12.5 0.0 0.2 12.2 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glu-tRNAGln PF02686.15 AID30185.1 - 3.5e-21 75.3 0.3 4.4e-21 74.9 0.3 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Lactamase_B_3 PF13483.6 AID30187.1 - 5.1e-21 75.2 0.0 7e-21 74.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 AID30187.1 - 7.9e-11 41.8 0.0 1.1e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AID30187.1 - 1.7e-10 41.3 3.9 2.4e-10 40.7 3.9 1.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 AID30187.1 - 0.052 13.0 0.0 0.072 12.5 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain RuvX PF03652.15 AID30188.1 - 6.4e-38 130.2 0.0 7.7e-38 129.9 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase Mem_trans PF03547.18 AID30189.1 - 5.5e-05 21.7 0.1 6.5e-05 21.5 0.1 1.2 1 0 0 1 1 1 1 Membrane transport protein TMEM135_C_rich PF15982.5 AID30189.1 - 0.057 14.0 1.2 0.074 13.7 0.1 1.6 2 0 0 2 2 2 0 N-terminal cysteine-rich region of Transmembrane protein 135 AidB_N PF18158.1 AID30190.1 - 9e-56 188.1 0.0 2e-55 187.0 0.0 1.6 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_1 PF00441.24 AID30190.1 - 3.2e-32 111.8 1.8 3.2e-32 111.8 1.8 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID30190.1 - 8.7e-17 61.1 0.0 1.6e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 AID30190.1 - 1.7e-12 47.8 1.1 1.7e-12 47.8 1.1 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain OTCace_N PF02729.21 AID30191.1 - 1.7e-41 141.6 0.3 2.7e-41 141.1 0.3 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 AID30191.1 - 1.4e-25 90.2 0.1 3.8e-25 88.8 0.0 1.7 2 1 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Glyco_trans_4_4 PF13579.6 AID30191.1 - 0.014 15.8 0.6 16 5.9 0.0 3.4 3 1 0 3 3 3 0 Glycosyl transferase 4-like domain Amidohydro_1 PF01979.20 AID30192.1 - 3.6e-15 56.1 0.0 1.1e-14 54.5 0.0 1.7 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID30192.1 - 1.9e-08 34.2 2.7 1.8e-06 27.7 0.0 3.4 2 1 1 4 4 4 2 Amidohydrolase family DHOase PF12890.7 AID30192.1 - 1.6e-05 24.8 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Dihydro-orotase-like G3P_acyltransf PF02660.15 AID30193.1 - 1.1e-51 175.1 19.8 1.3e-51 174.9 19.8 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase DUF2070 PF09843.9 AID30193.1 - 0.42 8.8 9.4 0.42 8.8 9.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DNA_processg_A PF02481.15 AID30194.1 - 3.1e-65 219.3 0.0 4e-65 219.0 0.0 1.1 1 0 0 1 1 1 1 DNA recombination-mediator protein A DprA_WH PF17782.1 AID30194.1 - 4.6e-19 68.3 0.3 1.5e-18 66.7 0.3 1.9 1 0 0 1 1 1 1 DprA winged helix domain DUF4148 PF13663.6 AID30194.1 - 0.08 13.1 0.5 0.08 13.1 0.5 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4148) Trehalose_PPase PF02358.16 AID30196.1 - 1.9e-27 95.9 0.0 2.5e-27 95.5 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 AID30196.1 - 3.9e-05 23.5 0.0 0.014 15.1 0.0 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 AID30196.1 - 0.00021 20.9 0.0 0.23 11.0 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Glyco_transf_20 PF00982.21 AID30197.1 - 1.5e-124 416.3 0.0 1.7e-124 416.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 DUF4381 PF14316.6 AID30197.1 - 0.072 13.3 0.4 0.21 11.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) GDE_N_bis PF14742.6 AID30198.1 - 3.5e-49 167.0 0.7 5.1e-49 166.5 0.7 1.3 1 0 0 1 1 1 1 N-terminal domain of (some) glycogen debranching enzymes GDE_C PF06202.14 AID30198.1 - 5.4e-10 38.8 0.0 2.3e-09 36.7 0.0 2.0 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Bac_rhamnosid6H PF17389.2 AID30198.1 - 5.3e-07 29.2 0.0 9.2e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_36 PF17167.4 AID30198.1 - 0.0002 20.2 0.0 0.00035 19.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase 36 superfamily, catalytic domain Trehalase PF01204.18 AID30198.1 - 0.032 13.0 0.0 0.046 12.5 0.0 1.2 1 0 0 1 1 1 0 Trehalase DUF4965 PF16335.5 AID30198.1 - 0.14 11.8 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4965) Glycos_transf_1 PF00534.20 AID30199.1 - 9.7e-19 67.5 0.0 1.6e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID30199.1 - 7.6e-17 62.0 0.0 1.4e-16 61.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID30199.1 - 4.9e-13 49.4 0.4 8.6e-13 48.6 0.4 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 AID30199.1 - 7.6e-08 33.0 0.4 7.6e-08 33.0 0.4 1.8 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 AID30199.1 - 0.0001 22.6 0.0 0.0002 21.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Acyl_transf_3 PF01757.22 AID30201.1 - 3.9e-25 88.6 35.5 3.9e-25 88.6 35.5 1.9 1 1 1 2 2 2 1 Acyltransferase family TssN PF17555.2 AID30201.1 - 0.02 14.3 2.2 0.071 12.5 2.2 1.8 1 0 0 1 1 1 0 Type VI secretion system, TssN Bowman-Birk_leg PF00228.20 AID30201.1 - 0.14 12.6 0.1 0.31 11.5 0.1 1.5 1 0 0 1 1 1 0 Bowman-Birk serine protease inhibitor family SoxE PF06525.11 AID30203.1 - 2.2e-05 24.0 0.0 4.2e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Sulfocyanin (SoxE) domain Copper-bind PF00127.20 AID30203.1 - 0.00019 21.8 0.0 0.00027 21.3 0.0 1.4 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 AID30203.1 - 0.00087 19.4 0.1 0.01 16.0 0.1 2.3 1 1 0 1 1 1 1 Cupredoxin-like domain PsbQ PF05757.11 AID30203.1 - 0.11 12.3 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) CARDB PF07705.11 AID30203.1 - 0.19 12.0 0.0 6.6 7.1 0.0 2.2 2 0 0 2 2 2 0 CARDB Transposase_mut PF00872.18 AID30204.1 - 1.6e-07 30.6 0.0 1.8e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family PepSY_2 PF13670.6 AID30205.1 - 1e-18 67.1 0.6 1.2e-18 66.9 0.6 1.0 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain Ni_hydr_CYTB PF01292.20 AID30206.1 - 5.3e-22 78.3 19.3 1e-21 77.4 19.3 1.4 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AID30206.1 - 1 10.0 18.4 3.2 8.4 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) DUF202 PF02656.15 AID30206.1 - 7.1 7.2 11.1 20 5.7 0.4 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF202) AA_kinase PF00696.28 AID30207.1 - 5e-13 49.2 0.1 6.7e-13 48.8 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family Beta-Casp PF10996.8 AID30208.1 - 3.1e-25 88.6 0.0 8.6e-25 87.2 0.0 1.7 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.27 AID30208.1 - 1.3e-12 48.1 0.3 1.2e-11 45.0 0.3 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 AID30208.1 - 3.6e-09 36.4 0.0 1.5e-08 34.5 0.0 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 AID30208.1 - 1.9e-07 30.7 0.0 3.6e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 AID30208.1 - 1e-06 28.4 0.2 3.3e-06 26.8 0.1 2.0 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 AID30208.1 - 0.0012 18.8 0.0 0.0056 16.6 0.0 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Usp PF00582.26 AID30209.1 - 5e-07 30.3 4.7 3.6e-06 27.6 1.1 2.9 2 1 0 2 2 2 1 Universal stress protein family BA14K PF07886.11 AID30210.1 - 5.8e-15 54.9 9.1 5.8e-15 54.9 9.1 2.1 3 0 0 3 3 3 1 BA14K-like protein FGGY_N PF00370.21 AID30211.1 - 4.1e-74 249.2 0.2 5.4e-74 248.8 0.2 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 AID30211.1 - 3.3e-52 177.1 0.4 7.4e-52 176.0 0.4 1.6 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 AID30211.1 - 3.4e-05 23.5 0.1 0.00011 21.8 0.1 1.7 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Nt_Gln_amidase PF09764.9 AID30211.1 - 0.18 11.4 0.1 0.29 10.7 0.1 1.2 1 0 0 1 1 1 0 N-terminal glutamine amidase DUF2160 PF09928.9 AID30214.1 - 6.3e-37 125.8 7.1 7e-37 125.6 7.1 1.0 1 0 0 1 1 1 1 Predicted small integral membrane protein (DUF2160) PRA1 PF03208.19 AID30214.1 - 0.06 13.0 1.6 0.074 12.7 1.6 1.1 1 0 0 1 1 1 0 PRA1 family protein BPD_transp_1 PF00528.22 AID30215.1 - 1.2e-10 41.4 13.7 1.2e-10 41.4 13.7 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID30216.1 - 2e-18 66.8 13.0 2e-18 66.8 13.0 2.2 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BatA PF07584.11 AID30216.1 - 0.34 11.3 4.8 0.27 11.6 0.4 2.7 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal ABC_tran PF00005.27 AID30217.1 - 9.5e-22 78.0 0.0 1.3e-21 77.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID30217.1 - 3.4e-07 31.0 0.1 1.2e-06 29.3 0.1 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_29 PF13555.6 AID30217.1 - 4.7e-05 23.0 0.0 9.8e-05 22.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain TOBE_2 PF08402.10 AID30217.1 - 0.00029 20.9 0.1 0.00072 19.7 0.1 1.6 1 0 0 1 1 1 1 TOBE domain RsgA_GTPase PF03193.16 AID30217.1 - 0.0014 18.6 0.0 0.006 16.5 0.0 2.0 2 0 0 2 2 2 1 RsgA GTPase AAA_18 PF13238.6 AID30217.1 - 0.0025 18.4 0.0 0.011 16.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID30217.1 - 0.0033 17.8 0.0 0.0056 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID30217.1 - 0.0048 17.4 0.1 0.0072 16.9 0.1 1.3 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID30217.1 - 0.0048 16.8 0.0 0.0076 16.2 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_21 PF13304.6 AID30217.1 - 0.0059 16.5 0.2 0.01 15.6 0.2 1.4 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system CysA_C_terminal PF17850.1 AID30217.1 - 0.007 16.9 0.1 0.018 15.6 0.1 1.8 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA PF00004.29 AID30217.1 - 0.021 15.2 0.0 0.036 14.5 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 AID30217.1 - 0.029 14.1 0.0 0.059 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID30217.1 - 0.043 13.9 0.0 0.21 11.7 0.0 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase RecX PF02631.16 AID30217.1 - 0.052 14.0 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 RecX family AAA_22 PF13401.6 AID30217.1 - 0.059 13.7 0.2 0.093 13.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID30217.1 - 0.059 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 AID30217.1 - 0.061 13.0 0.0 0.13 11.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 AID30217.1 - 0.11 11.6 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 AID30217.1 - 0.12 12.3 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 AID30217.1 - 0.13 12.2 0.0 0.19 11.6 0.0 1.4 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 AID30217.1 - 0.13 12.3 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID30217.1 - 0.13 12.5 0.1 0.34 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID30217.1 - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 AID30217.1 - 0.18 10.8 0.0 0.27 10.3 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_tran PF00005.27 AID30218.1 - 7.9e-28 97.7 0.0 1.2e-27 97.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID30218.1 - 0.00027 21.0 0.1 0.00062 19.9 0.1 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID30218.1 - 0.00032 20.6 0.0 0.22 11.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30218.1 - 0.011 15.1 0.0 0.12 11.8 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DAO PF01266.24 AID30219.1 - 9.8e-57 193.1 0.9 1e-56 193.1 0.2 1.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO_C PF16901.5 AID30219.1 - 4.7e-15 55.6 0.0 9.9e-15 54.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase Pyr_redox_2 PF07992.14 AID30219.1 - 0.0016 17.7 0.8 1.2 8.3 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID30219.1 - 0.021 14.1 0.0 0.043 13.0 0.0 1.5 1 1 0 1 1 1 0 FAD binding domain FAD_binding_2 PF00890.24 AID30219.1 - 0.03 13.4 1.7 1.7 7.6 0.0 2.4 2 0 0 2 2 2 0 FAD binding domain FAD_oxidored PF12831.7 AID30219.1 - 0.031 13.6 0.1 2.7 7.2 0.1 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID30219.1 - 0.071 13.4 0.7 0.41 10.9 0.6 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain STPPase_N PF16891.5 AID30219.1 - 0.11 13.0 0.0 0.54 10.7 0.0 2.1 2 0 0 2 2 2 0 Serine-threonine protein phosphatase N-terminal domain K_oxygenase PF13434.6 AID30219.1 - 0.22 10.6 0.3 1.9 7.6 0.0 2.0 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Mqo PF06039.15 AID30219.1 - 0.22 10.0 0.0 0.35 9.3 0.0 1.2 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) DeoRC PF00455.22 AID30220.1 - 5.3e-53 179.2 1.3 6.9e-53 178.9 1.3 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID30220.1 - 4.5e-17 61.5 0.0 8.5e-17 60.7 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID30220.1 - 1.8e-05 24.6 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 AID30220.1 - 8.8e-05 22.1 0.0 0.00079 19.0 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID30220.1 - 0.0056 16.6 0.1 0.12 12.3 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Put_DNA-bind_N PF06971.13 AID30220.1 - 0.0059 16.6 0.0 0.011 15.7 0.0 1.5 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus AcetylCoA_hydro PF02550.15 AID30220.1 - 0.023 14.7 0.4 0.12 12.4 0.1 1.9 1 1 0 2 2 2 0 Acetyl-CoA hydrolase/transferase N-terminal domain HTH_28 PF13518.6 AID30220.1 - 0.023 14.8 0.0 0.072 13.2 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DDRGK PF09756.9 AID30220.1 - 0.024 14.2 0.1 0.055 13.0 0.0 1.6 2 0 0 2 2 2 0 DDRGK domain TFIIE_alpha PF02002.17 AID30220.1 - 0.029 14.2 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit FeoC PF09012.10 AID30220.1 - 0.053 13.6 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator Sigma70_r4 PF04545.16 AID30220.1 - 0.055 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 AID30220.1 - 0.059 13.2 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain PqqD PF05402.12 AID30220.1 - 0.067 13.5 0.0 2.1 8.7 0.0 2.5 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) MarR_2 PF12802.7 AID30220.1 - 0.13 12.2 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 MarR family E3_UFM1_ligase PF09743.9 AID30220.1 - 0.13 11.8 0.0 0.33 10.5 0.0 1.7 2 0 0 2 2 2 0 E3 UFM1-protein ligase 1 Pyridoxal_deC PF00282.19 AID30221.1 - 3e-95 319.1 0.0 3.7e-95 318.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 AID30221.1 - 0.011 15.0 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase Zincin_2 PF10103.9 AID30221.1 - 0.022 14.1 0.3 2.9 7.1 0.0 2.1 2 0 0 2 2 2 0 Zincin-like metallopeptidase DegT_DnrJ_EryC1 PF01041.17 AID30221.1 - 0.062 12.6 0.0 0.086 12.1 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AID30221.1 - 0.18 10.7 0.0 0.27 10.1 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V KIX_2 PF16987.5 AID30221.1 - 0.19 11.7 0.0 0.35 10.9 0.0 1.4 1 0 0 1 1 1 0 KIX domain Proteasome PF00227.26 AID30222.1 - 9.6e-07 28.5 0.0 2.3e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 Proteasome subunit Phage_base_V PF04717.12 AID30222.1 - 0.087 12.7 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Transglut_core PF01841.19 AID30223.1 - 1.3e-26 93.2 0.1 2.3e-26 92.5 0.1 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bact_transglu_N PF08379.10 AID30223.1 - 2.6e-22 79.5 0.2 7.9e-22 78.0 0.1 1.8 2 0 0 2 2 2 1 Bacterial transglutaminase-like N-terminal region Transglut_core3 PF13471.6 AID30223.1 - 0.016 15.1 0.2 0.032 14.1 0.2 1.5 1 0 0 1 1 1 0 Transglutaminase-like superfamily Acetyltransf_2 PF00797.17 AID30223.1 - 0.11 12.3 0.0 0.4 10.4 0.0 1.8 2 0 0 2 2 2 0 N-acetyltransferase DUF553 PF04473.12 AID30223.1 - 0.22 11.0 0.0 0.34 10.4 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like domain Alpha-E PF04168.12 AID30224.1 - 6.6e-89 298.6 5.8 7.7e-89 298.3 5.8 1.0 1 0 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. BRCT_3 PF18428.1 AID30224.1 - 0.028 14.5 0.0 0.18 11.9 0.0 2.1 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain CP_ATPgrasp_2 PF14403.6 AID30225.1 - 6.4e-162 538.7 0.0 7.5e-162 538.5 0.0 1.0 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 CP_ATPgrasp_1 PF04174.13 AID30225.1 - 4.7e-149 495.9 0.0 6.2e-149 495.5 0.0 1.2 1 0 0 1 1 1 1 A circularly permuted ATPgrasp ATPgrasp_ST PF14397.6 AID30225.1 - 0.017 14.4 0.0 1.5 8.0 0.0 2.2 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 AID30225.1 - 0.046 13.0 0.0 0.52 9.5 0.0 2.5 2 1 0 2 2 2 0 YheC/D like ATP-grasp SPOR PF05036.13 AID30225.1 - 0.16 12.4 0.0 0.32 11.4 0.0 1.5 1 0 0 1 1 1 0 Sporulation related domain AsnC_trans_reg PF01037.21 AID30226.1 - 2e-11 43.7 0.1 2.2e-11 43.5 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain DUF4864 PF16156.5 AID30227.1 - 8.2e-36 122.7 0.0 1e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4864) PQQ PF01011.21 AID30227.1 - 0.12 12.3 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 PQQ enzyme repeat TGT PF01702.18 AID30228.1 - 1.4e-47 162.5 0.0 1.5e-47 162.4 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Arm-DNA-bind_2 PF12167.8 AID30228.1 - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Arm DNA-binding domain FAM86 PF14904.6 AID30228.1 - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function HMG_box_5 PF14887.6 AID30228.1 - 0.17 11.9 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 HMG (high mobility group) box 5 TGT PF01702.18 AID30229.1 - 5.1e-73 246.2 0.0 6.5e-73 245.9 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Queuosine_synth PF02547.15 AID30231.1 - 1.7e-126 421.8 0.0 1.9e-126 421.6 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein DMT_YdcZ PF04657.13 AID30232.1 - 1.5e-36 125.7 21.8 1.7e-36 125.5 21.8 1.0 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ Pro_isomerase PF00160.21 AID30233.1 - 2e-46 158.1 0.0 2.3e-46 157.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pro_isomerase PF00160.21 AID30234.1 - 1.5e-44 152.0 0.1 1.8e-44 151.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3105 PF11303.8 AID30234.1 - 0.047 13.8 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3105) CTP_transf_like PF01467.26 AID30235.1 - 2.8e-12 47.0 0.0 3.3e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like DUF4044 PF13253.6 AID30236.1 - 0.73 9.4 4.4 0.36 10.4 1.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4044) DNA_gyraseA_C PF03989.13 AID30237.1 - 1.6e-24 85.1 3.8 3.7e-13 48.7 0.4 2.1 2 0 0 2 2 2 2 DNA gyrase C-terminal domain, beta-propeller DNA_topoisoIV PF00521.20 AID30238.1 - 1.3e-151 505.4 0.0 1.6e-151 505.1 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 AID30238.1 - 6.2e-39 131.2 0.4 1.6e-13 49.9 0.1 4.5 4 0 0 4 4 4 4 DNA gyrase C-terminal domain, beta-propeller SIS PF01380.22 AID30238.1 - 0.066 13.1 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 SIS domain DUF2789 PF10982.8 AID30239.1 - 0.026 14.7 0.0 0.026 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2789) Sulfate_transp PF00916.20 AID30240.1 - 2.4e-67 227.3 24.8 3.2e-67 226.9 24.8 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 AID30240.1 - 6.7e-12 45.1 0.0 1.1e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 STAS domain Xan_ur_permease PF00860.20 AID30240.1 - 7.9e-09 34.7 32.1 7.9e-09 34.7 32.1 1.7 1 1 0 2 2 2 1 Permease family STAS_2 PF13466.6 AID30240.1 - 0.047 14.0 0.7 0.13 12.6 0.7 1.8 1 0 0 1 1 1 0 STAS domain ParBc_2 PF08857.11 AID30241.1 - 2.3e-56 190.4 0.0 2.8e-56 190.1 0.0 1.1 1 0 0 1 1 1 1 Putative ParB-like nuclease HTH_18 PF12833.7 AID30242.1 - 7.9e-23 80.5 1.6 1.6e-22 79.5 1.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30242.1 - 1.7e-15 56.7 0.0 1.3e-07 31.5 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID30242.1 - 0.0039 17.1 0.0 0.0063 16.4 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain BNR PF02012.20 AID30243.1 - 0.074 13.1 0.0 0.3 11.2 0.0 2.1 1 0 0 1 1 1 0 BNR/Asp-box repeat Polyketide_cyc PF03364.20 AID30243.1 - 0.21 11.8 2.6 0.64 10.2 0.4 2.0 1 1 1 2 2 2 0 Polyketide cyclase / dehydrase and lipid transport Acyl_transf_3 PF01757.22 AID30245.1 - 4.8e-13 48.9 33.8 7.8e-13 48.2 33.8 1.3 1 0 0 1 1 1 1 Acyltransferase family DUF5463 PF17551.2 AID30245.1 - 0.042 13.7 1.0 0.16 11.9 1.0 2.1 1 0 0 1 1 1 0 Family of unknown function (DUF5463) Peptidase_C7 PF01830.18 AID30245.1 - 0.075 12.5 0.1 0.12 11.8 0.1 1.2 1 0 0 1 1 1 0 Peptidase C7 family MarC PF01914.17 AID30246.1 - 5.4e-57 192.5 12.0 6e-57 192.3 12.0 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.16 AID30246.1 - 0.014 15.0 12.2 0.1 12.3 12.2 2.1 1 1 0 1 1 1 0 Integral membrane protein TerC family DUF4212 PF13937.6 AID30246.1 - 0.83 10.1 7.2 0.39 11.1 0.6 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4212) Colicin_V PF02674.16 AID30246.1 - 6.2 6.8 19.2 1.1 9.2 8.1 2.3 2 0 0 2 2 2 0 Colicin V production protein DUF4440 PF14534.6 AID30247.1 - 6.6e-11 42.6 0.0 7.7e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) OsmC PF02566.19 AID30248.1 - 4.6e-17 62.3 0.0 5.6e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein SSB PF00436.25 AID30249.1 - 7.7e-40 135.1 1.1 9.1e-40 134.9 1.1 1.1 1 0 0 1 1 1 1 Single-strand binding protein family tRNA_anti-codon PF01336.25 AID30249.1 - 0.016 15.2 0.1 0.027 14.5 0.1 1.4 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain HTH_20 PF12840.7 AID30250.1 - 2e-16 59.8 1.7 2.8e-16 59.3 1.7 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID30250.1 - 9.2e-13 47.8 0.0 1.3e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID30250.1 - 8.6e-07 28.8 1.6 1.3e-06 28.2 1.6 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 AID30250.1 - 0.0018 18.2 0.0 0.003 17.5 0.0 1.4 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 AID30250.1 - 0.0021 17.9 0.0 0.0036 17.2 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 AID30250.1 - 0.083 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 AID30250.1 - 0.11 12.4 0.3 0.21 11.6 0.0 1.6 2 0 0 2 2 2 0 MarR family AHSA1 PF08327.11 AID30251.1 - 9.2e-21 74.4 0.0 1.1e-20 74.1 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID30251.1 - 2.8e-05 24.4 0.2 5e-05 23.6 0.2 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport CLP_protease PF00574.23 AID30252.1 - 5.5e-80 267.6 0.0 6.4e-80 267.3 0.0 1.0 1 0 0 1 1 1 1 Clp protease THUMP PF02926.17 AID30252.1 - 0.012 15.7 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 THUMP domain UvrA_DNA-bind PF17755.1 AID30255.1 - 1.9e-38 131.2 0.1 1e-36 125.6 0.0 2.5 2 0 0 2 2 2 1 UvrA DNA-binding domain UvrA_inter PF17760.1 AID30255.1 - 4.1e-38 129.8 0.1 1.2e-37 128.3 0.1 1.9 2 0 0 2 2 2 1 UvrA interaction domain ABC_tran PF00005.27 AID30255.1 - 6.8e-21 75.2 0.0 3e-05 24.6 0.0 4.4 4 0 0 4 4 4 4 ABC transporter SMC_N PF02463.19 AID30255.1 - 9.7e-09 35.0 0.0 0.034 13.6 0.0 4.1 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30255.1 - 3.2e-06 26.8 0.3 0.053 13.3 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.6 AID30255.1 - 2.7e-05 23.8 0.3 0.29 10.7 0.0 3.0 3 0 0 3 3 3 2 AAA domain DnaJ_CXXCXGXG PF00684.19 AID30255.1 - 3.1e-05 24.2 1.1 0.015 15.6 0.3 3.3 3 0 0 3 3 3 1 DnaJ central domain BCA_ABC_TP_C PF12399.8 AID30255.1 - 3.9e-05 23.4 1.1 0.0087 16.0 0.1 2.6 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter AAA_16 PF13191.6 AID30255.1 - 6.2e-05 23.5 0.0 0.58 10.5 0.0 3.1 3 0 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 AID30255.1 - 0.0024 17.8 0.0 1.8 8.4 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 AID30255.1 - 0.01 16.1 0.2 17 5.7 0.0 3.4 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 AID30255.1 - 0.018 15.2 0.1 0.77 9.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain Anti-TRAP PF15777.5 AID30255.1 - 0.024 14.6 1.5 20 5.2 0.0 3.6 3 1 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein AAA_21 PF13304.6 AID30255.1 - 0.031 14.1 0.0 0.031 14.1 0.0 3.8 4 0 0 4 4 4 0 AAA domain, putative AbiEii toxin, Type IV TA system ATPase PF06745.13 AID30255.1 - 0.041 13.2 0.0 3 7.1 0.1 2.4 2 0 0 2 2 2 0 KaiC AAA_23 PF13476.6 AID30255.1 - 0.084 13.4 2.0 1.2 9.7 0.0 2.8 3 0 0 3 3 3 0 AAA domain Gluconate_2-dh3 PF13618.6 AID30255.1 - 0.089 13.0 0.0 0.25 11.6 0.0 1.8 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 AAA_15 PF13175.6 AID30255.1 - 0.11 12.2 0.2 31 4.1 0.0 3.5 4 0 0 4 4 4 0 AAA ATPase domain APS_kinase PF01583.20 AID30255.1 - 0.11 12.3 0.3 1.2 9.0 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase DUF302 PF03625.14 AID30257.1 - 4.1e-16 58.6 0.0 6.2e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 Acetyltransf_1 PF00583.25 AID30258.1 - 1.4e-14 54.3 0.0 1.7e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID30258.1 - 1.4e-13 50.9 0.0 1.6e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID30258.1 - 1e-11 45.1 0.0 1.4e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AID30258.1 - 4.4e-06 26.9 0.1 1.5e-05 25.2 0.0 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID30258.1 - 5e-06 26.6 0.0 7e-05 22.9 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID30258.1 - 0.0012 18.7 0.0 0.002 18.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID30258.1 - 0.0033 17.5 0.0 0.0052 16.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 AID30258.1 - 0.035 14.3 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 AID30258.1 - 0.035 13.6 0.0 0.06 12.8 0.0 1.5 1 1 0 1 1 1 0 Putative acetyl-transferase DUF72 PF01904.18 AID30259.1 - 1.6e-52 178.8 0.0 1.8e-52 178.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 zf-MYST PF17772.1 AID30259.1 - 0.015 14.9 0.3 0.034 13.8 0.0 1.7 2 0 0 2 2 2 0 MYST family zinc finger domain GGDEF PF00990.21 AID30260.1 - 3.1e-37 127.8 0.0 4.4e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain CAP_N PF01213.19 AID30260.1 - 0.0022 17.5 0.4 0.0033 17.0 0.4 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal NeA_P2 PF12312.8 AID30260.1 - 0.067 12.6 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Nepovirus subgroup A polyprotein LapA_dom PF06305.11 AID30260.1 - 4.3 7.2 0.0 4.3 7.2 0.0 3.5 5 1 0 5 5 5 0 Lipopolysaccharide assembly protein A domain ABC_tran PF00005.27 AID30262.1 - 1.5e-28 100.0 0.0 1.9e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30262.1 - 1.4e-08 35.0 0.0 0.0046 16.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID30262.1 - 0.0022 18.4 0.2 0.003 18.0 0.2 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID30262.1 - 0.0032 17.4 0.2 0.0052 16.7 0.2 1.3 1 0 0 1 1 1 1 RsgA GTPase ATPase_2 PF01637.18 AID30262.1 - 0.0089 16.0 0.0 0.018 14.9 0.0 1.4 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 AID30262.1 - 0.013 15.8 0.3 0.47 10.7 0.1 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID30262.1 - 0.024 14.7 0.0 0.054 13.6 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase SMC_N PF02463.19 AID30262.1 - 0.029 13.8 0.3 0.079 12.4 0.2 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID30262.1 - 0.038 13.7 0.4 0.049 13.3 0.4 1.5 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 AID30262.1 - 0.038 13.2 0.2 0.11 11.7 0.2 1.6 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 AID30262.1 - 0.039 13.9 0.1 0.072 13.0 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 AID30262.1 - 0.046 14.2 0.1 0.07 13.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID30262.1 - 0.12 12.0 0.1 0.19 11.4 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain Roc PF08477.13 AID30262.1 - 0.15 12.3 0.1 0.24 11.6 0.1 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 AID30263.1 - 1.2e-28 100.3 0.0 1.7e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30263.1 - 1.2e-06 28.6 0.1 0.019 14.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30263.1 - 1.5e-06 27.8 0.0 0.00023 20.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain BCA_ABC_TP_C PF12399.8 AID30263.1 - 1.4e-05 24.9 0.0 2.6e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_30 PF13604.6 AID30263.1 - 2e-05 24.4 1.8 0.00042 20.1 1.8 2.1 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID30263.1 - 2.3e-05 25.0 0.0 3.3e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID30263.1 - 0.00043 20.1 0.0 0.0016 18.2 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 AID30263.1 - 0.00069 19.3 0.0 0.0013 18.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF2813 PF11398.8 AID30263.1 - 0.0051 16.1 0.0 0.01 15.1 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) AAA_22 PF13401.6 AID30263.1 - 0.028 14.7 0.2 0.14 12.4 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 AID30263.1 - 0.031 12.9 0.0 0.042 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID30263.1 - 0.041 13.8 0.0 0.076 12.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_27 PF13514.6 AID30263.1 - 0.13 11.9 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID30264.1 - 7.3e-41 140.1 30.1 7.3e-41 140.1 30.1 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID30265.1 - 1.2e-55 188.6 36.3 1.6e-55 188.1 36.3 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component HEAT_2 PF13646.6 AID30265.1 - 0.00031 21.1 12.5 0.14 12.6 1.9 3.3 2 1 1 3 3 3 2 HEAT repeats Peripla_BP_5 PF13433.6 AID30266.1 - 1.4e-168 560.5 0.0 1.7e-168 560.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 AID30266.1 - 5.8e-64 216.9 0.2 6.8e-64 216.7 0.2 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID30266.1 - 0.007 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Receptor family ligand binding region fn3_3 PF14686.6 AID30267.1 - 0.061 13.1 0.1 0.27 11.0 0.0 1.9 1 1 1 2 2 2 0 Polysaccharide lyase family 4, domain II GMC_oxred_C PF05199.13 AID30268.1 - 5.8e-21 75.5 0.5 2e-20 73.8 0.5 1.9 1 1 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 AID30268.1 - 1.5e-19 70.5 0.3 2.1e-19 70.0 0.3 1.2 1 0 0 1 1 1 1 GMC oxidoreductase Pyr_redox_2 PF07992.14 AID30268.1 - 0.0002 20.7 0.3 0.0027 17.0 0.1 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID30268.1 - 0.00058 19.2 0.9 0.0011 18.3 0.9 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 AID30268.1 - 0.00072 18.7 3.6 0.029 13.4 2.1 2.7 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 AID30268.1 - 0.0021 18.2 1.2 0.0082 16.4 1.2 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 AID30268.1 - 0.0056 16.3 0.1 0.014 15.0 0.1 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 AID30268.1 - 0.083 12.1 1.6 0.17 11.1 1.6 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID30268.1 - 0.18 10.8 2.9 0.16 11.0 1.0 1.9 2 1 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 AID30268.1 - 0.51 10.9 2.6 24 5.6 0.7 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Glyoxalase PF00903.25 AID30270.1 - 7.1e-11 42.4 0.1 8.9e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID30270.1 - 1.7e-05 25.1 0.0 2.1e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID30270.1 - 0.0002 22.1 0.0 0.00029 21.6 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 AID30270.1 - 0.061 13.4 0.0 0.072 13.2 0.0 1.3 1 1 0 1 1 1 0 Glyoxalase-like domain RHH_4 PF13467.6 AID30272.1 - 1.7e-22 79.0 0.0 2.8e-22 78.3 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix domain DUF1451 PF07295.11 AID30272.1 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain PNP_UDP_1 PF01048.20 AID30273.1 - 5.4e-39 133.8 0.1 6.1e-39 133.7 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily HATPase_c PF02518.26 AID30274.1 - 1.1e-20 74.2 0.0 2.2e-20 73.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID30274.1 - 1.2e-20 73.8 0.0 3.1e-20 72.4 0.0 1.8 1 0 0 1 1 1 1 Response regulator receiver domain PAS_8 PF13188.7 AID30274.1 - 5.8e-17 61.3 0.2 3.5e-07 30.1 0.0 3.8 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.10 AID30274.1 - 1e-16 61.1 2.8 5.6e-05 23.3 0.3 3.5 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 AID30274.1 - 2.1e-14 53.5 0.1 5.4e-05 23.2 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 AID30274.1 - 7.1e-08 32.6 0.0 0.22 11.8 0.0 3.6 3 1 0 3 3 3 3 PAS domain HisKA PF00512.25 AID30274.1 - 2.9e-07 30.4 0.4 1.1e-06 28.6 0.1 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_7 PF12860.7 AID30274.1 - 2.8e-06 27.5 0.0 0.0035 17.5 0.0 3.5 3 0 0 3 3 3 1 PAS fold HPTransfase PF10090.9 AID30274.1 - 0.0025 17.6 0.1 0.0064 16.3 0.1 1.7 1 0 0 1 1 1 1 Histidine phosphotransferase C-terminal domain MerC PF03203.14 AID30274.1 - 0.029 14.8 0.2 0.057 13.9 0.2 1.4 1 0 0 1 1 1 0 MerC mercury resistance protein DUF3995 PF13160.6 AID30274.1 - 0.11 12.9 0.6 0.27 11.6 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) zf-dskA_traR PF01258.17 AID30276.1 - 1.3e-12 47.4 0.2 2.7e-12 46.4 0.2 1.5 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DUF1003 PF06210.11 AID30276.1 - 0.14 12.3 4.7 0.058 13.5 2.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) His_Phos_1 PF00300.22 AID30277.1 - 2.2e-08 34.0 0.0 4e-08 33.2 0.0 1.4 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) DUF463 PF04317.12 AID30278.1 - 6.5e-173 575.7 0.0 7.4e-173 575.5 0.0 1.0 1 0 0 1 1 1 1 YcjX-like family, DUF463 AAA_22 PF13401.6 AID30278.1 - 0.065 13.5 0.1 8.1 6.7 0.0 3.2 2 1 0 3 3 3 0 AAA domain DUF697 PF05128.12 AID30279.1 - 1.4e-46 158.2 0.3 2e-46 157.7 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF697) Cryptochrome_C PF12546.8 AID30280.1 - 0.033 14.8 0.1 0.049 14.2 0.1 1.3 1 0 0 1 1 1 0 Blue/Ultraviolet sensing protein C terminal LPAM_1 PF08139.12 AID30281.1 - 0.015 15.7 3.0 0.015 15.7 3.0 2.1 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site Fes1 PF08609.10 AID30281.1 - 0.024 15.5 0.1 0.028 15.3 0.1 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor Fes1 DUF3450 PF11932.8 AID30281.1 - 0.086 12.1 1.5 0.1 11.9 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) MFS_1 PF07690.16 AID30282.1 - 6.9e-28 97.6 66.7 1.5e-25 89.9 56.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 AID30282.1 - 0.039 12.8 28.6 0.042 12.7 6.9 3.0 1 1 1 2 2 2 0 MFS_1 like family Cupin_6 PF12852.7 AID30283.1 - 4.6e-41 140.6 0.7 6.6e-41 140.0 0.7 1.2 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 AID30283.1 - 7.1e-19 67.9 1.8 4.5e-18 65.3 1.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30283.1 - 5.2e-15 55.1 0.0 3.6e-07 30.1 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID30283.1 - 6.1e-05 22.9 0.4 0.00016 21.6 0.1 1.8 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_31 PF13560.6 AID30283.1 - 0.0009 19.5 2.8 0.0035 17.6 0.8 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain ARD PF03079.14 AID30283.1 - 0.0016 18.6 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 ARD/ARD' family Na_H_Exchanger PF00999.21 AID30284.1 - 5.5e-71 239.4 46.2 7.4e-71 238.9 46.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 AID30284.1 - 1.7e-21 76.6 1.2 1.9e-20 73.2 0.1 2.5 2 0 0 2 2 2 1 TrkA-N domain Clp_N PF02861.20 AID30284.1 - 0.033 14.3 0.3 0.25 11.5 0.0 2.6 3 0 0 3 3 3 0 Clp amino terminal domain, pathogenicity island component DUF924 PF06041.11 AID30285.1 - 7.8e-57 192.3 1.0 9e-57 192.1 1.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) HPPK PF01288.20 AID30286.1 - 4.6e-37 127.0 0.0 5.4e-37 126.7 0.0 1.1 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FolB PF02152.18 AID30287.1 - 8.7e-27 93.9 0.1 9.6e-27 93.7 0.1 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase DUF922 PF06037.11 AID30289.1 - 4.6e-50 169.5 0.1 5.4e-50 169.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF922) TraW_N PF12477.8 AID30289.1 - 2.5 8.2 4.5 4.6 7.3 4.5 1.5 1 0 0 1 1 1 0 Sex factor F TraW protein N terminal MFS_1 PF07690.16 AID30290.1 - 6.4e-50 170.0 50.0 6.4e-50 170.0 50.0 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily TRI12 PF06609.13 AID30290.1 - 1.2e-11 43.8 22.6 1.9e-11 43.1 22.6 1.3 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Sugar_tr PF00083.24 AID30290.1 - 1.6e-08 33.9 7.5 1.6e-08 33.9 7.5 2.4 2 0 0 2 2 2 1 Sugar (and other) transporter OATP PF03137.20 AID30290.1 - 1.4e-05 23.6 17.9 0.022 13.1 0.4 3.3 2 1 1 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.7 AID30290.1 - 0.019 13.8 23.5 0.056 12.3 10.2 2.5 2 0 0 2 2 2 0 MFS_1 like family Bacillus_PapR PF05968.11 AID30290.1 - 0.058 13.3 1.2 0.32 10.9 0.2 2.7 2 0 0 2 2 2 0 Bacillus PapR protein Pyr_redox_2 PF07992.14 AID30291.1 - 1.4e-24 86.9 0.0 1.7e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID30291.1 - 1.5e-22 80.3 0.0 4.8e-20 72.0 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID30291.1 - 2.1e-09 37.8 0.1 4.3e-07 30.4 0.0 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID30291.1 - 2.9e-09 36.2 0.0 4.3e-05 22.4 0.0 2.6 3 0 0 3 3 3 2 HI0933-like protein K_oxygenase PF13434.6 AID30291.1 - 4.4e-06 26.1 0.1 8.9e-06 25.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 AID30291.1 - 0.00026 20.7 0.0 0.52 9.8 0.0 2.8 2 1 1 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID30291.1 - 0.0004 20.6 0.0 0.0014 18.8 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 AID30291.1 - 0.00059 19.2 1.4 0.016 14.4 0.1 2.5 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 AID30291.1 - 0.0046 16.2 0.0 0.01 15.1 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain FMO-like PF00743.19 AID30291.1 - 0.012 14.1 0.0 0.016 13.6 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.6 AID30291.1 - 0.019 15.4 0.0 3.8 8.0 0.0 2.6 3 0 0 3 3 3 0 Putative NAD(P)-binding Amino_oxidase PF01593.24 AID30291.1 - 0.024 13.9 0.0 0.048 13.0 0.0 1.3 1 1 0 1 1 1 0 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 AID30291.1 - 0.075 12.1 0.0 22 4.0 0.0 3.2 4 0 0 4 4 4 0 FAD binding domain NAD_binding_9 PF13454.6 AID30291.1 - 0.1 12.6 0.1 8.1 6.4 0.0 2.6 3 0 0 3 3 3 0 FAD-NAD(P)-binding Fer2 PF00111.27 AID30292.1 - 2.2e-15 56.3 1.0 2.6e-15 56.1 1.0 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain QSregVF PF13652.6 AID30292.1 - 0.052 13.6 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor DAP_epimerase PF01678.19 AID30292.1 - 0.081 13.1 0.4 0.11 12.6 0.4 1.2 1 0 0 1 1 1 0 Diaminopimelate epimerase Hpt PF01627.23 AID30293.1 - 5.4e-07 29.8 1.9 8.7e-07 29.1 0.6 1.7 1 1 1 2 2 2 1 Hpt domain Apolipoprotein PF01442.18 AID30294.1 - 1.5e-31 109.8 178.8 4e-08 33.4 17.2 13.2 3 2 7 12 12 12 10 Apolipoprotein A1/A4/E domain ApoLp-III PF07464.11 AID30294.1 - 0.036 14.1 0.2 0.036 14.1 0.2 13.4 6 4 8 14 14 14 0 Apolipophorin-III precursor (apoLp-III) DASH_Dam1 PF08653.10 AID30294.1 - 0.048 13.5 0.4 11 6.0 0.1 5.7 3 1 1 4 4 4 0 DASH complex subunit Dam1 p450 PF00067.22 AID30294.1 - 0.056 12.2 3.9 1.4 7.5 0.0 4.1 4 0 0 4 4 4 0 Cytochrome P450 Dynamin_M PF01031.20 AID30294.1 - 0.093 11.9 6.9 0.37 10.0 0.2 4.3 2 2 1 4 4 4 0 Dynamin central region Baculo_PEP_C PF04513.12 AID30294.1 - 0.1 12.7 97.1 3.9 7.5 0.1 16.8 4 2 18 22 22 22 0 Baculovirus polyhedron envelope protein, PEP, C terminus LIF_OSM PF01291.17 AID30294.1 - 0.28 11.3 4.5 28 4.8 0.1 5.3 3 1 1 5 5 5 0 LIF / OSM family KELK PF15796.5 AID30294.1 - 0.71 10.4 6.6 3 8.3 0.4 5.1 3 0 0 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase PKK PF12474.8 AID30294.1 - 2 8.5 8.4 5.8 7.0 0.3 4.8 3 1 1 5 5 5 0 Polo kinase kinase Utp12 PF04003.12 AID30294.1 - 2.8 8.3 13.0 68 3.8 0.1 6.6 5 1 1 6 6 6 0 Dip2/Utp12 Family DUF4916 PF16262.5 AID30294.1 - 5.7 6.4 9.1 96 2.4 0.1 5.4 4 1 2 6 6 6 0 Domain of unknown function (DUF4916) DUF2703 PF10865.8 AID30294.1 - 7.2 6.8 11.3 66 3.7 0.1 5.6 5 0 0 5 5 5 0 Domain of unknown function (DUF2703) GATase_5 PF13507.6 AID30295.1 - 0.2 10.7 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Halo_GVPC PF05465.13 AID30295.1 - 2.3 8.6 4.8 1.4 9.3 1.3 2.2 2 0 0 2 2 2 0 Halobacterial gas vesicle protein C (GVPC) repeat RNase_T PF00929.24 AID30296.1 - 0.0039 17.7 0.0 0.005 17.4 0.0 1.2 1 0 0 1 1 1 1 Exonuclease Prolactin_RP PF15172.6 AID30296.1 - 0.048 13.3 0.1 0.088 12.4 0.1 1.4 1 0 0 1 1 1 0 Prolactin-releasing peptide YycC PF14174.6 AID30297.1 - 0.051 13.4 0.0 0.13 12.1 0.0 1.6 2 0 0 2 2 2 0 YycC-like protein ABC_trans_aux PF03886.13 AID30298.1 - 6.8e-33 113.5 0.0 8e-33 113.3 0.0 1.0 1 0 0 1 1 1 1 ABC-type transport auxiliary lipoprotein component DUF948 PF06103.11 AID30299.1 - 2.8e-12 46.7 19.8 0.00045 20.4 3.9 5.7 1 1 3 5 5 5 4 Bacterial protein of unknown function (DUF948) MlaD PF02470.20 AID30299.1 - 2.4e-08 34.1 0.3 9.5e-08 32.2 0.3 2.0 1 0 0 1 1 1 1 MlaD protein DUF1664 PF07889.12 AID30299.1 - 0.00014 21.9 9.5 0.04 14.0 0.9 4.7 1 1 2 4 4 4 1 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 AID30299.1 - 0.00028 21.1 4.7 13 6.2 0.3 4.5 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Baculo_PEP_C PF04513.12 AID30299.1 - 0.00046 20.2 21.1 0.09 12.8 2.3 4.6 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus WXG100 PF06013.12 AID30299.1 - 0.0011 19.2 11.3 0.028 14.7 1.7 4.9 2 2 3 5 5 5 1 Proteins of 100 residues with WXG Laminin_II PF06009.12 AID30299.1 - 0.0018 18.3 18.1 1.1 9.2 0.1 4.1 1 1 2 4 4 4 2 Laminin Domain II Prominin PF05478.11 AID30299.1 - 0.0032 15.5 3.0 0.03 12.3 0.2 1.9 1 1 1 2 2 2 1 Prominin BORCS6 PF10157.9 AID30299.1 - 0.0034 17.6 3.2 0.18 12.0 0.0 3.2 1 1 2 3 3 3 1 BLOC-1-related complex sub-unit 6 BAR_3 PF16746.5 AID30299.1 - 0.0045 16.7 0.5 3.1 7.5 0.1 3.2 2 2 1 3 3 3 1 BAR domain of APPL family Vta1 PF04652.16 AID30299.1 - 0.015 15.3 2.4 0.46 10.4 0.1 2.3 2 0 0 2 2 2 0 Vta1 like T3SSipB PF16535.5 AID30299.1 - 0.015 15.8 13.9 0.8 10.2 5.8 3.3 1 1 2 3 3 3 0 Type III cell invasion protein SipB AAA_13 PF13166.6 AID30299.1 - 0.016 13.9 4.2 0.02 13.6 3.4 1.5 1 1 0 1 1 1 0 AAA domain DUF1351 PF07083.11 AID30299.1 - 0.02 14.7 3.3 5 6.8 2.6 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1351) SIKE PF05769.11 AID30299.1 - 0.021 14.8 4.2 0.51 10.3 0.1 3.3 2 1 1 3 3 3 0 SIKE family RAC_head PF16717.5 AID30299.1 - 0.024 15.6 7.2 1.8 9.6 0.8 3.9 1 1 2 3 3 3 0 Ribosome-associated complex head domain Mce4_CUP1 PF11887.8 AID30299.1 - 0.025 14.0 15.7 0.22 10.9 3.7 3.4 1 1 1 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative IFT46_B_C PF12317.8 AID30299.1 - 0.026 14.3 0.3 0.52 10.0 0.5 2.4 1 1 1 2 2 2 0 Intraflagellar transport complex B protein 46 C terminal CorA PF01544.18 AID30299.1 - 0.028 13.8 3.1 2 7.7 0.4 3.2 2 1 1 3 3 3 0 CorA-like Mg2+ transporter protein TBCC_N PF16752.5 AID30299.1 - 0.028 14.9 5.2 1 9.8 0.2 3.8 3 1 0 3 3 3 0 Tubulin-specific chaperone C N-terminal domain APG17 PF04108.12 AID30299.1 - 0.029 13.5 2.6 4.1 6.4 1.2 3.0 1 1 1 2 2 2 0 Autophagy protein Apg17 AA_synth PF06684.11 AID30299.1 - 0.032 13.8 0.1 0.075 12.6 0.1 1.6 1 0 0 1 1 1 0 Amino acid synthesis Spc7 PF08317.11 AID30299.1 - 0.039 12.8 4.6 0.21 10.4 1.5 2.6 2 1 0 3 3 3 0 Spc7 kinetochore protein Nup88 PF10168.9 AID30299.1 - 0.046 11.5 0.1 1.9 6.2 0.0 2.0 2 0 0 2 2 2 0 Nuclear pore component WEMBL PF05701.11 AID30299.1 - 0.053 12.2 4.3 0.08 11.6 4.2 1.5 1 1 0 1 1 1 0 Weak chloroplast movement under blue light ISG65-75 PF11727.8 AID30299.1 - 0.054 12.7 5.9 0.45 9.7 3.6 2.7 1 1 2 3 3 3 0 Invariant surface glycoprotein ASH PF15780.5 AID30299.1 - 0.055 13.7 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin BORCS8 PF10167.9 AID30299.1 - 0.073 13.0 2.1 1.5 8.7 0.1 3.0 2 1 1 3 3 2 0 BLOC-1-related complex sub-unit 8 Acyl-CoA_dh_C PF12806.7 AID30299.1 - 0.076 13.2 5.3 0.62 10.2 0.1 3.9 1 1 3 4 4 4 0 Acetyl-CoA dehydrogenase C-terminal like Tropomyosin PF00261.20 AID30299.1 - 0.079 12.3 2.9 0.28 10.5 1.3 2.5 1 1 2 3 3 3 0 Tropomyosin Sec34 PF04136.15 AID30299.1 - 0.09 12.7 2.2 3.3 7.6 0.3 3.7 1 1 4 5 5 5 0 Sec34-like family CK2S PF15011.6 AID30299.1 - 0.092 12.6 1.2 4.8 7.0 0.1 3.3 1 1 1 3 3 3 0 Casein Kinase 2 substrate FlaC_arch PF05377.11 AID30299.1 - 0.11 12.9 2.0 16 5.9 0.0 3.6 4 1 1 5 5 2 0 Flagella accessory protein C (FlaC) Cas_Csa4 PF09703.10 AID30299.1 - 0.13 11.6 2.5 2.7 7.2 0.1 3.1 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_Csa4) Zw10 PF06248.13 AID30299.1 - 0.13 10.8 0.4 0.46 9.0 0.0 1.8 1 1 1 2 2 2 0 Centromere/kinetochore Zw10 COG2 PF06148.11 AID30299.1 - 0.14 12.3 5.7 19 5.3 0.6 3.9 2 1 1 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 FlgN PF05130.12 AID30299.1 - 0.19 12.3 7.2 0.69 10.4 1.6 3.6 1 1 2 3 3 3 0 FlgN protein VPS28 PF03997.12 AID30299.1 - 0.19 11.4 1.6 0.42 10.3 0.9 1.9 1 1 1 2 2 2 0 VPS28 protein DegS PF05384.11 AID30299.1 - 0.19 11.2 4.1 1.4 8.4 1.3 3.4 2 1 0 3 3 3 0 Sensor protein DegS KxDL PF10241.9 AID30299.1 - 0.21 11.9 6.7 4.5 7.6 0.1 3.6 3 1 1 4 4 4 0 Uncharacterized conserved protein DUF615 PF04751.14 AID30299.1 - 0.28 11.2 2.5 1.2 9.0 0.4 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF615) SNARE PF05739.19 AID30299.1 - 0.76 9.8 10.8 0.17 11.9 0.4 3.9 3 1 1 4 4 3 0 SNARE domain Seryl_tRNA_N PF02403.22 AID30299.1 - 0.81 10.0 11.0 2.2 8.5 1.7 4.1 2 1 2 5 5 5 0 Seryl-tRNA synthetase N-terminal domain DUF3829 PF12889.7 AID30299.1 - 0.93 8.9 6.0 5.3 6.4 1.9 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3829) DUF2959 PF11172.8 AID30299.1 - 1.5 8.9 4.8 5.5 7.1 1.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2959) KfrA_N PF11740.8 AID30299.1 - 5.9 7.6 9.1 2.8 8.6 3.6 2.6 2 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term DivIVA PF05103.13 AID30299.1 - 8.5 6.5 12.6 3 8.0 5.3 3.5 2 2 1 4 4 3 0 DivIVA protein ABC_tran PF00005.27 AID30300.1 - 1.2e-30 106.8 0.0 1.6e-30 106.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30300.1 - 1.1e-07 32.0 2.6 0.00038 20.4 0.2 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF3839 PF12943.7 AID30300.1 - 0.0022 17.5 0.0 0.0033 16.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3839) RsgA_GTPase PF03193.16 AID30300.1 - 0.0027 17.7 0.1 0.0044 16.9 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID30300.1 - 0.012 16.0 0.1 0.02 15.3 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 AID30300.1 - 0.036 13.8 0.3 0.068 12.9 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 AID30300.1 - 0.057 12.8 0.0 0.097 12.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family MeaB PF03308.16 AID30300.1 - 0.063 12.3 0.1 0.099 11.6 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 AID30300.1 - 0.12 12.7 0.2 0.43 10.8 0.2 2.0 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 AID30300.1 - 0.15 11.3 0.2 0.26 10.5 0.1 1.4 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 AID30300.1 - 0.15 12.1 0.2 0.43 10.7 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase MlaE PF02405.16 AID30301.1 - 9.4e-68 228.0 22.3 1.2e-67 227.7 22.3 1.1 1 0 0 1 1 1 1 Permease MlaE STAS PF01740.21 AID30301.1 - 7.8e-06 25.5 0.0 1.9e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 AID30301.1 - 0.00011 22.4 0.1 0.00042 20.6 0.0 2.0 2 0 0 2 2 2 1 STAS domain DUF3482 PF11981.8 AID30301.1 - 0.06 12.7 0.9 0.091 12.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3482) MFS_1_like PF12832.7 AID30303.1 - 5.3e-36 124.3 25.9 1e-35 123.3 25.9 1.4 1 1 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 AID30303.1 - 5e-10 38.8 50.6 1.2e-05 24.4 6.5 3.0 1 1 2 3 3 3 2 Major Facilitator Superfamily Nuc_H_symport PF03825.16 AID30303.1 - 5.2e-10 38.9 26.3 6.6e-10 38.5 26.3 1.0 1 0 0 1 1 1 1 Nucleoside H+ symporter DUF2852 PF11014.8 AID30303.1 - 8.1 6.6 5.2 20 5.3 0.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2852) Metallophos_2 PF12850.7 AID30304.1 - 2.5e-12 47.3 4.5 4.1e-11 43.3 4.5 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 AID30304.1 - 2.4e-10 41.3 5.0 4.6e-10 40.3 5.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase adh_short PF00106.25 AID30305.1 - 3e-12 46.4 0.1 3.4e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID30305.1 - 1.3e-08 34.7 0.0 1.6e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase THF_DHG_CYH_C PF02882.19 AID30305.1 - 0.0043 16.4 0.3 0.24 10.7 0.0 2.2 1 1 1 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KR PF08659.10 AID30305.1 - 0.0056 16.6 0.1 0.0068 16.3 0.1 1.1 1 0 0 1 1 1 1 KR domain AdoHcyase_NAD PF00670.21 AID30305.1 - 0.013 15.6 2.3 0.018 15.1 2.3 1.3 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 3HCDH_N PF02737.18 AID30305.1 - 0.035 14.0 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 AID30306.1 - 2.2e-23 83.1 0.0 2.7e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID30306.1 - 1.4e-12 47.5 0.0 1.7e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase PTA_PTB PF01515.19 AID30307.1 - 7.4e-96 321.2 0.0 9.8e-96 320.8 0.0 1.1 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 AID30307.1 - 6.1e-30 104.4 0.1 2.6e-21 76.3 0.0 2.4 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain Malic_M PF03949.15 AID30307.1 - 2.7e-19 69.5 0.2 1.8e-18 66.7 0.2 2.1 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain OMP_b-brl PF13505.6 AID30308.1 - 1.1e-25 90.8 15.2 1.3e-25 90.5 15.2 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Autotransporter PF03797.19 AID30308.1 - 8.7e-07 28.8 12.0 8.7e-07 28.8 12.0 2.6 2 1 0 2 2 2 1 Autotransporter beta-domain OmpA_membrane PF01389.17 AID30308.1 - 0.00044 20.0 5.5 0.00068 19.4 5.5 1.3 1 1 0 1 1 1 1 OmpA-like transmembrane domain tRNA-synt_1c PF00749.21 AID30310.1 - 1.1e-66 224.9 0.0 1.5e-66 224.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain ABC_tran PF00005.27 AID30312.1 - 8.8e-33 113.7 0.0 1.5e-32 113.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID30312.1 - 4.6e-16 59.3 8.6 4.6e-16 59.3 8.6 1.4 2 0 0 2 2 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 AID30312.1 - 0.00064 20.2 1.8 0.0012 19.3 0.3 2.2 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 AID30312.1 - 0.00069 19.1 0.0 0.0063 16.0 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID30312.1 - 0.0065 16.2 0.0 0.0089 15.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain G-alpha PF00503.20 AID30312.1 - 0.01 15.0 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 AID30312.1 - 0.014 15.2 0.1 0.037 13.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID30312.1 - 0.023 15.0 0.3 0.17 12.2 0.3 2.1 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 AID30312.1 - 0.024 14.7 0.0 0.049 13.7 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 AID30312.1 - 0.044 13.5 0.0 0.15 11.8 0.0 1.9 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 AID30312.1 - 0.061 13.2 0.1 1 9.2 0.0 2.3 2 0 0 2 2 2 0 NACHT domain DEAD PF00270.29 AID30312.1 - 0.068 12.9 0.1 0.22 11.3 0.1 1.7 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_18 PF13238.6 AID30312.1 - 0.068 13.7 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID30312.1 - 0.073 13.2 0.0 0.16 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID30312.1 - 0.12 12.4 0.1 1 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 AID30312.1 - 0.13 12.2 0.1 4 7.3 0.0 2.3 2 0 0 2 2 2 0 NTPase AAA_24 PF13479.6 AID30312.1 - 0.15 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 AID30312.1 - 0.17 11.7 0.1 0.75 9.5 0.1 1.9 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system PRK PF00485.18 AID30312.1 - 0.2 11.4 0.1 0.86 9.3 0.0 1.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Acetyltransf_7 PF13508.7 AID30313.1 - 4.1e-11 43.2 0.1 5.2e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID30313.1 - 6.4e-11 42.5 0.0 7.8e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID30313.1 - 1.2e-09 38.2 0.0 1.6e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID30313.1 - 3e-05 23.9 0.0 8.4e-05 22.5 0.0 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID30313.1 - 0.0027 17.8 0.0 0.0049 17.0 0.0 1.5 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase PanZ PF12568.8 AID30313.1 - 0.0052 16.5 0.0 0.0059 16.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_9 PF13527.7 AID30313.1 - 0.0061 16.6 0.0 0.01 15.9 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain NAD_synthase PF02540.17 AID30314.1 - 1.4e-74 250.2 0.0 1.9e-74 249.8 0.0 1.1 1 0 0 1 1 1 1 NAD synthase CN_hydrolase PF00795.22 AID30314.1 - 2.6e-24 86.0 0.0 3.7e-24 85.5 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase QueC PF06508.13 AID30314.1 - 0.0014 18.1 0.0 0.0024 17.4 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 AID30314.1 - 0.014 15.1 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase tRNA_Me_trans PF03054.16 AID30314.1 - 0.017 13.9 0.0 0.026 13.3 0.0 1.4 1 1 0 1 1 1 0 tRNA methyl transferase Adenine_glyco PF03352.13 AID30315.1 - 3.9e-13 49.6 0.0 6.6e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Methyladenine glycosylase DUF1003 PF06210.11 AID30316.1 - 3.4e-38 129.9 0.9 5e-38 129.4 0.7 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1003) SNARE_assoc PF09335.11 AID30317.1 - 1.2e-14 54.9 12.4 2.1e-14 54.1 7.9 2.7 2 1 1 3 3 3 1 SNARE associated Golgi protein Phage_holin_2_4 PF16082.5 AID30317.1 - 2.6 7.8 6.7 5.5 6.8 0.2 2.4 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like DAGK_prokar PF01219.19 AID30318.1 - 7e-25 86.8 4.4 8e-25 86.6 4.4 1.0 1 0 0 1 1 1 1 Prokaryotic diacylglycerol kinase DUF1011 PF06237.12 AID30318.1 - 0.036 14.4 0.1 0.067 13.5 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1011) Herpes_U5 PF05999.11 AID30318.1 - 0.045 12.5 0.1 0.05 12.3 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus U5-like family Saf_2TM PF18303.1 AID30318.1 - 0.25 10.9 2.3 0.33 10.6 2.3 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain Flp_Fap PF04964.14 AID30318.1 - 7.5 6.5 7.7 21 5.1 2.5 2.5 2 0 0 2 2 2 0 Flp/Fap pilin component GFA PF04828.14 AID30319.1 - 3.1e-16 59.5 1.0 4.3e-16 59.0 1.0 1.2 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme GGDEF PF00990.21 AID30320.1 - 1.4e-41 141.9 0.0 3.2e-41 140.7 0.0 1.6 2 0 0 2 2 2 1 Diguanylate cyclase, GGDEF domain Sec8_exocyst PF04048.14 AID30320.1 - 0.0026 17.7 0.3 0.0055 16.6 0.3 1.5 1 0 0 1 1 1 1 Sec8 exocyst complex component specific domain GGDEF_2 PF17853.1 AID30320.1 - 0.032 14.5 0.0 0.16 12.2 0.0 2.1 2 0 0 2 2 2 0 GGDEF-like domain DUF4337 PF14235.6 AID30321.1 - 4.8e-29 101.6 6.2 4.8e-29 101.6 6.2 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4337) DUF2721 PF11026.8 AID30321.1 - 0.0059 16.5 0.6 0.062 13.2 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2721) DUF2207 PF09972.9 AID30321.1 - 0.027 13.3 0.0 0.048 12.4 0.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) TrbC PF04956.13 AID30321.1 - 0.031 14.5 3.7 0.98 9.7 2.7 2.3 2 0 0 2 2 2 0 TrbC/VIRB2 family DUF4272 PF14094.6 AID30321.1 - 0.034 13.4 0.5 0.048 12.9 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4272) Tir_receptor_N PF07490.11 AID30321.1 - 0.035 13.9 0.2 0.04 13.7 0.2 1.2 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus P33MONOX PF15302.6 AID30321.1 - 0.12 12.1 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 P33 mono-oxygenase DAHP_synth_2 PF01474.16 AID30322.1 - 2.3e-200 665.7 0.0 2.5e-200 665.6 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family TRCF PF03461.15 AID30323.1 - 3e-27 94.8 0.0 9.4e-27 93.2 0.0 1.9 2 0 0 2 2 2 1 TRCF domain CarD_CdnL_TRCF PF02559.16 AID30323.1 - 2.7e-22 79.3 0.0 6.7e-22 78.0 0.0 1.7 1 0 0 1 1 1 1 CarD-like/TRCF domain Helicase_C PF00271.31 AID30323.1 - 8.6e-19 67.9 0.0 1.7e-17 63.8 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 AID30323.1 - 3.3e-17 62.8 0.1 7.3e-17 61.7 0.1 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase UvrB_inter PF17757.1 AID30323.1 - 1.6e-15 57.1 0.0 3.2e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 UvrB interaction domain ResIII PF04851.15 AID30323.1 - 5.8e-07 29.7 0.0 1.4e-06 28.4 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 AID30323.1 - 0.093 13.0 0.5 0.58 10.4 0.5 2.2 1 1 0 1 1 1 0 AAA domain AroM PF07302.11 AID30323.1 - 0.12 11.8 0.1 0.23 10.8 0.1 1.4 1 0 0 1 1 1 0 AroM protein UB2H PF14814.6 AID30323.1 - 0.12 12.4 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain SecA_DEAD PF07517.14 AID30323.1 - 0.21 10.8 0.0 0.42 9.9 0.0 1.4 1 0 0 1 1 1 0 SecA DEAD-like domain Sdh5 PF03937.16 AID30324.1 - 3.6e-23 81.3 0.0 4.4e-23 81.0 0.0 1.1 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase Helicase_C PF00271.31 AID30325.1 - 2.5e-22 79.3 0.0 5.5e-18 65.3 0.0 2.3 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 AID30325.1 - 8.6e-16 58.2 0.1 1.8e-15 57.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 AID30325.1 - 5.4e-08 33.0 0.0 1.1e-07 32.1 0.0 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit RecG_wedge PF17191.4 AID30325.1 - 4e-06 26.5 0.0 5.6e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 RecG wedge domain tRNA_anti-codon PF01336.25 AID30325.1 - 0.0012 18.8 0.0 0.0026 17.7 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain AAA_30 PF13604.6 AID30325.1 - 0.0084 15.8 3.2 0.011 15.5 1.4 2.1 2 0 0 2 2 2 1 AAA domain SNF2_N PF00176.23 AID30325.1 - 0.02 13.6 0.0 0.03 13.1 0.0 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain SecA_DEAD PF07517.14 AID30325.1 - 0.089 12.1 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 SecA DEAD-like domain AAA_16 PF13191.6 AID30325.1 - 2.8 8.3 5.7 0.85 10.0 0.5 2.7 3 1 0 3 3 3 0 AAA ATPase domain DUF502 PF04367.13 AID30326.1 - 2e-35 120.9 0.0 3.7e-35 120.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF502) TM_helix PF05552.12 AID30326.1 - 9.1 6.3 9.1 1.9 8.5 4.2 2.1 2 0 0 2 2 2 0 Conserved TM helix NTP_transf_3 PF12804.7 AID30327.1 - 9.7e-19 68.3 2.1 1.6e-18 67.6 2.1 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 AID30327.1 - 3.3e-18 64.6 12.4 1.9e-05 24.2 0.3 5.6 2 1 2 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transferase PF00483.23 AID30327.1 - 1.1e-08 35.0 0.1 1.5e-08 34.6 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 AID30327.1 - 2.3e-08 34.1 0.7 2.3e-08 34.1 0.7 1.7 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 AID30327.1 - 5.9e-06 25.9 11.3 3.6e-05 23.4 0.9 4.4 3 1 2 5 5 5 1 Hexapeptide repeat of succinyl-transferase CTP_transf_3 PF02348.19 AID30327.1 - 0.00016 21.6 0.0 0.00026 21.0 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase NAD_Gly3P_dh_C PF07479.14 AID30327.1 - 0.03 14.6 0.2 0.12 12.7 0.0 2.0 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DsbD PF02683.15 AID30328.1 - 1.8e-59 201.2 12.2 2.1e-59 201.0 12.2 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Lipoprotein_15 PF03640.15 AID30329.1 - 7.3e-32 108.7 13.1 1e-18 66.6 3.7 2.3 2 0 0 2 2 2 2 Secreted repeat of unknown function Topoisom_bac PF01131.20 AID30330.1 - 1.1e-122 410.1 0.4 1.4e-122 409.7 0.4 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim_C_rpt PF13368.6 AID30330.1 - 1.4e-55 185.1 6.6 3.2e-20 71.9 0.4 4.9 5 0 0 5 5 5 3 Topoisomerase C-terminal repeat Toprim PF01751.22 AID30330.1 - 2.9e-25 88.5 0.1 9.9e-25 86.8 0.0 2.0 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.19 AID30330.1 - 6.6e-17 61.0 2.9 2.9e-15 55.8 1.8 2.8 3 0 0 3 3 3 1 Topoisomerase DNA binding C4 zinc finger Toprim_4 PF13662.6 AID30330.1 - 0.13 12.7 0.0 0.41 11.2 0.0 1.8 1 0 0 1 1 1 0 Toprim domain RNB PF00773.19 AID30331.1 - 7.6e-87 291.7 0.0 1e-86 291.3 0.0 1.1 1 0 0 1 1 1 1 RNB domain CSD2 PF17876.1 AID30331.1 - 6e-09 35.9 0.2 4.6e-08 33.1 0.0 2.5 3 0 0 3 3 3 1 Cold shock domain S1 PF00575.23 AID30331.1 - 1.9e-07 31.3 0.0 6e-07 29.7 0.0 1.9 2 0 0 2 2 2 1 S1 RNA binding domain RNase_II_C_S1 PF18614.1 AID30331.1 - 0.019 14.9 0.4 0.23 11.4 0.0 2.9 3 0 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain DUF983 PF06170.12 AID30332.1 - 5.4e-33 113.2 0.9 5.4e-33 113.2 0.9 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF983) zf-dskA_traR PF01258.17 AID30332.1 - 0.0069 16.3 4.2 0.17 11.9 0.1 2.2 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger TF_Zn_Ribbon PF08271.12 AID30332.1 - 0.011 15.2 0.8 0.018 14.5 0.8 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 AID30332.1 - 0.013 14.9 1.7 0.54 9.7 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 AID30332.1 - 0.021 14.7 1.0 2 8.4 0.1 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain C1_1 PF00130.22 AID30332.1 - 0.025 14.5 0.3 0.04 13.8 0.3 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PADR1 PF08063.12 AID30332.1 - 0.048 13.5 1.4 0.39 10.5 0.2 2.1 2 0 0 2 2 2 0 PADR1 (NUC008) domain Rubredoxin_2 PF18073.1 AID30332.1 - 0.06 13.1 3.9 0.18 11.6 0.3 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain Phage_holin_3_7 PF05449.11 AID30332.1 - 0.075 13.1 0.6 0.1 12.6 0.6 1.2 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 zinc_ribbon_2 PF13240.6 AID30332.1 - 0.13 12.0 5.2 5.4 6.9 1.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF1610 PF07754.11 AID30332.1 - 0.6 10.1 6.9 1.9 8.5 3.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Cys_rich_CPXG PF14255.6 AID30332.1 - 0.66 9.9 3.8 8.4 6.4 3.8 2.1 1 1 0 1 1 1 0 Cysteine-rich CPXCG Ribosomal_L32p PF01783.23 AID30332.1 - 0.72 10.1 4.3 11 6.4 0.2 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family YhfH PF14149.6 AID30332.1 - 5 7.2 5.5 3.9 7.5 0.1 2.1 2 0 0 2 2 2 0 YhfH-like protein NUDIX PF00293.28 AID30333.1 - 3.2e-08 33.7 0.6 0.0025 17.9 0.2 2.5 2 1 0 2 2 2 2 NUDIX domain MFS_1 PF07690.16 AID30334.1 - 1.6e-31 109.5 67.2 1.5e-17 63.6 35.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30334.1 - 1.7e-06 27.2 13.1 1.7e-06 27.2 13.1 2.5 1 1 0 2 2 2 1 Sugar (and other) transporter MFS_1_like PF12832.7 AID30334.1 - 8e-05 21.7 11.7 8e-05 21.7 11.7 2.7 1 1 0 2 2 2 1 MFS_1 like family MFS_3 PF05977.13 AID30334.1 - 0.0071 14.8 25.7 0.017 13.5 5.1 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector MFS_4 PF06779.14 AID30334.1 - 0.15 11.3 36.9 0.19 11.0 36.9 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Ribosomal_L33 PF00471.20 AID30336.1 - 3.4e-15 56.2 0.8 3.8e-15 56.0 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L33 DUF1661 PF07877.11 AID30336.1 - 0.022 14.4 0.7 0.049 13.3 0.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1661) TssD PF17642.1 AID30336.1 - 0.067 13.0 0.1 0.072 12.9 0.1 1.0 1 0 0 1 1 1 0 Hemolysin coregulated protein Hcp (TssD) ABC_tran PF00005.27 AID30338.1 - 8.6e-31 107.3 0.0 4.4e-30 105.0 0.0 1.9 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 AID30338.1 - 4.3e-16 58.8 0.1 1.7e-15 57.0 0.1 2.1 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID30338.1 - 1.8e-13 51.1 0.1 9.6e-13 48.8 0.0 2.4 2 0 0 2 2 1 1 MalK OB fold domain TOBE PF03459.17 AID30338.1 - 3.5e-09 36.8 0.3 2.1e-08 34.3 0.0 2.5 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 AID30338.1 - 2.5e-07 30.8 0.0 0.0011 18.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID30338.1 - 3.3e-05 24.4 0.1 6.7e-05 23.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID30338.1 - 5.5e-05 23.1 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 AID30338.1 - 9.3e-05 22.0 0.0 0.00021 20.8 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 AID30338.1 - 9.7e-05 22.9 0.1 0.00055 20.4 0.0 2.4 2 0 0 2 2 1 1 CysA C-terminal regulatory domain Rad17 PF03215.15 AID30338.1 - 0.0004 20.3 0.0 0.00091 19.2 0.0 1.6 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_22 PF13401.6 AID30338.1 - 0.00086 19.6 0.0 0.0019 18.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID30338.1 - 0.0017 18.1 0.0 0.0038 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID30338.1 - 0.002 17.8 0.0 0.0049 16.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 AID30338.1 - 0.0059 17.0 0.0 0.021 15.2 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT_C PF16565.5 AID30338.1 - 0.0094 15.9 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 1 Phospholipase D-like domain at C-terminus of MIT AAA_28 PF13521.6 AID30338.1 - 0.014 15.7 0.0 0.057 13.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID30338.1 - 0.014 15.6 0.0 0.023 14.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID30338.1 - 0.017 15.1 0.2 0.042 13.8 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 AID30338.1 - 0.019 15.5 0.0 0.033 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID30338.1 - 0.019 14.5 0.0 0.044 13.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID30338.1 - 0.022 15.3 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID30338.1 - 0.023 14.4 0.0 0.071 12.8 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_5 PF07728.14 AID30338.1 - 0.032 14.2 0.1 0.063 13.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 AID30338.1 - 0.034 13.6 0.1 2.6 7.4 0.0 2.8 3 0 0 3 3 3 0 PhoH-like protein ATPase_2 PF01637.18 AID30338.1 - 0.034 14.0 0.0 0.063 13.2 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 AID30338.1 - 0.045 13.1 0.0 0.078 12.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.23 AID30338.1 - 0.067 13.3 0.0 0.16 12.0 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 AID30338.1 - 0.093 13.1 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 AID30338.1 - 0.11 11.6 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 AID30338.1 - 0.11 12.0 0.0 0.33 10.5 0.0 1.8 2 0 0 2 2 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 AID30338.1 - 0.13 11.8 0.0 0.26 10.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 AID30338.1 - 0.2 11.7 0.0 0.46 10.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 AID30339.1 - 4.9e-19 68.8 18.2 4.9e-19 68.8 18.2 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID30340.1 - 1.3e-21 77.1 17.3 2.1e-21 76.5 17.3 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_1 PF01547.25 AID30341.1 - 1e-47 163.7 8.4 1.7e-47 162.9 8.4 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID30341.1 - 2.1e-40 139.3 6.8 4.2e-40 138.3 6.8 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Cys_Met_Meta_PP PF01053.20 AID30342.1 - 2.5e-103 345.6 0.0 3e-103 345.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID30342.1 - 0.00054 19.2 0.0 0.00082 18.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 AID30342.1 - 0.00085 18.7 0.0 0.0065 15.8 0.0 2.0 1 1 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.11 AID30342.1 - 0.008 14.7 0.0 0.03 12.9 0.0 1.7 2 0 0 2 2 2 1 Methionine gamma-lyase SelA PF03841.13 AID30342.1 - 0.021 13.8 0.0 0.035 13.1 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 AID30342.1 - 0.04 12.9 0.0 0.057 12.4 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AID30342.1 - 0.13 11.5 0.0 0.26 10.6 0.0 1.4 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family FCD PF07729.12 AID30343.1 - 1.8e-26 93.0 5.4 2.8e-26 92.4 5.4 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID30343.1 - 2.7e-17 62.2 0.6 6e-17 61.0 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 AID30343.1 - 0.00015 21.6 0.0 0.00041 20.2 0.0 1.7 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB RP-C PF03428.13 AID30343.1 - 0.0014 18.3 0.5 0.0028 17.3 0.5 1.6 1 1 0 1 1 1 1 Replication protein C N-terminal domain HTH_Crp_2 PF13545.6 AID30343.1 - 0.0017 18.3 0.1 0.0033 17.4 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID30343.1 - 0.0021 17.9 0.2 0.0021 17.9 0.2 2.6 3 0 0 3 3 3 1 MarR family HTH_DeoR PF08220.12 AID30343.1 - 0.0069 16.1 0.0 0.017 14.9 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_29 PF13551.6 AID30343.1 - 0.0079 16.2 1.9 0.013 15.5 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn helix FadR_C PF07840.12 AID30343.1 - 0.0087 16.0 0.0 0.015 15.2 0.0 1.6 1 1 0 1 1 1 1 FadR C-terminal domain Rrf2 PF02082.20 AID30343.1 - 0.013 15.9 0.1 0.028 14.8 0.0 1.6 2 0 0 2 2 1 0 Transcriptional regulator HTH_23 PF13384.6 AID30343.1 - 0.013 15.3 7.7 0.029 14.2 0.1 2.9 3 0 0 3 3 3 0 Homeodomain-like domain HTH_11 PF08279.12 AID30343.1 - 0.017 15.0 0.4 0.089 12.7 0.1 2.2 2 0 0 2 2 2 0 HTH domain MarR PF01047.22 AID30343.1 - 0.021 14.8 0.1 0.05 13.5 0.1 1.6 1 0 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 AID30343.1 - 0.023 14.9 0.0 0.063 13.5 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_30 PF13556.6 AID30343.1 - 0.025 14.4 0.0 0.071 12.9 0.0 1.8 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_36 PF13730.6 AID30343.1 - 0.043 13.8 0.0 0.074 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r3 PF04539.16 AID30343.1 - 0.11 12.6 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Sigma-70 region 3 HTH_41 PF14502.6 AID30343.1 - 0.14 11.8 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 AID30343.1 - 0.16 12.1 1.5 0.81 9.9 0.2 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain FAD_binding_3 PF01494.19 AID30344.1 - 6.7e-78 262.4 0.1 9.1e-78 261.9 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 AID30344.1 - 1.6e-07 30.4 0.4 0.0072 15.1 0.6 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_2 PF07992.14 AID30344.1 - 4.6e-07 29.4 0.1 0.022 14.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID30344.1 - 6.8e-06 26.6 0.2 0.0051 17.4 0.4 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID30344.1 - 2.6e-05 23.8 0.4 6.6e-05 22.4 0.1 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID30344.1 - 0.00011 21.2 0.8 0.12 11.2 0.0 2.4 3 0 0 3 3 3 2 Tryptophan halogenase DAO PF01266.24 AID30344.1 - 0.00013 21.7 4.5 0.027 14.0 1.6 2.5 2 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID30344.1 - 0.0021 17.4 0.0 0.14 11.4 0.8 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID30344.1 - 0.0024 17.0 1.4 0.0047 16.1 1.4 1.4 1 1 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 AID30344.1 - 0.0032 16.7 0.3 0.0032 16.7 0.3 1.6 2 0 0 2 2 2 1 Thi4 family NAD_binding_9 PF13454.6 AID30344.1 - 0.01 15.9 0.2 3.8 7.5 0.0 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding SE PF08491.10 AID30344.1 - 0.016 14.2 0.0 0.029 13.4 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase NAD_binding_8 PF13450.6 AID30344.1 - 0.017 15.4 1.0 0.04 14.1 0.4 2.0 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 AID30344.1 - 0.066 12.5 0.2 11 5.1 0.0 2.4 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 AID30344.1 - 0.079 12.0 0.4 0.63 9.0 1.1 2.0 2 0 0 2 2 2 0 Lycopene cyclase protein GGDEF PF00990.21 AID30345.1 - 1.4e-50 171.2 0.0 2.7e-50 170.2 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Response_reg PF00072.24 AID30345.1 - 1.8e-41 140.8 0.9 3e-29 101.5 0.3 2.6 2 0 0 2 2 2 2 Response regulator receiver domain GGDEF_2 PF17853.1 AID30345.1 - 1.1e-06 28.9 0.1 5e-06 26.8 0.1 2.2 1 0 0 1 1 1 1 GGDEF-like domain DUF4777 PF16007.5 AID30345.1 - 0.02 15.1 0.0 0.084 13.1 0.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) Tsp45I PF06300.12 AID30345.1 - 0.14 11.7 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Tsp45I type II restriction enzyme Response_reg PF00072.24 AID30346.1 - 8.4e-27 93.6 0.1 9.3e-27 93.4 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF3572 PF12096.8 AID30347.1 - 3e-32 110.7 0.1 3.3e-32 110.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3572) TAL_effector PF03377.13 AID30347.1 - 0.086 13.2 0.5 0.18 12.1 0.0 1.8 2 0 0 2 2 2 0 TAL effector repeat XPC-binding PF09280.11 AID30347.1 - 0.14 11.9 0.0 12 5.7 0.0 2.1 2 0 0 2 2 2 0 XPC-binding domain DUF2608 PF11019.8 AID30348.1 - 3.1e-07 30.1 0.0 0.0018 17.8 0.0 2.7 1 1 1 2 2 2 2 Protein of unknown function (DUF2608) Glyco_transf_5 PF08323.11 AID30348.1 - 0.015 15.0 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 Starch synthase catalytic domain Acetyltransf_1 PF00583.25 AID30351.1 - 4.7e-08 33.3 0.0 6.8e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.6 AID30351.1 - 0.00039 20.5 0.0 0.00061 19.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_10 PF13673.7 AID30351.1 - 0.0033 17.4 0.0 0.059 13.3 0.0 2.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID30351.1 - 0.037 13.8 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_7 PF13508.7 AID30351.1 - 0.047 14.1 0.0 0.12 12.9 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID30351.1 - 0.16 12.0 0.0 1.1 9.4 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain IMS PF00817.20 AID30352.1 - 3.3e-43 147.3 0.0 6e-43 146.4 0.0 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 AID30352.1 - 5.7e-21 75.4 0.2 1.1e-20 74.5 0.2 1.5 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 AID30352.1 - 0.084 13.2 0.0 0.56 10.6 0.0 2.3 2 0 0 2 2 2 0 IMS family HHH motif EamA PF00892.20 AID30354.1 - 8.3e-28 97.3 31.1 4.7e-16 59.2 9.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 AID30354.1 - 0.0004 19.6 14.2 0.015 14.4 0.2 3.0 2 1 1 3 3 3 2 Magnesium transporter NIPA SLC35F PF06027.12 AID30354.1 - 0.017 14.7 9.0 0.23 11.0 3.6 2.5 1 1 0 2 2 2 0 Solute carrier family 35 Ion_trans_2 PF07885.16 AID30355.1 - 1.8e-12 47.1 9.8 1.8e-12 47.1 9.8 2.0 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 AID30355.1 - 6.4e-07 28.9 15.3 9.6e-07 28.3 15.3 1.2 1 0 0 1 1 1 1 Ion transport protein zf-ribbon_3 PF13248.6 AID30355.1 - 0.00021 20.5 2.0 0.00035 19.9 2.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 AID30355.1 - 0.05 13.6 2.2 0.076 13.1 2.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 AID30355.1 - 0.075 12.8 2.0 0.13 12.0 2.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain PKD_channel PF08016.12 AID30355.1 - 1.4 7.5 6.8 1.8 7.2 6.8 1.2 1 0 0 1 1 1 0 Polycystin cation channel DUF1610 PF07754.11 AID30355.1 - 3.7 7.6 5.6 2.3 8.3 1.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DNA_pol3_alpha PF07733.12 AID30356.1 - 2.9e-103 345.0 0.0 5.3e-103 344.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 AID30356.1 - 2.2e-63 212.5 0.1 3.7e-63 211.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain PHP PF02811.19 AID30356.1 - 7.4e-33 114.2 0.0 2.8e-31 109.1 0.0 2.4 2 0 0 2 2 2 1 PHP domain HHH_6 PF14579.6 AID30356.1 - 8.1e-24 83.7 0.0 2e-23 82.4 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 AID30356.1 - 8.5e-07 28.9 0.0 2.6e-06 27.3 0.0 1.8 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF655 PF04919.12 AID30356.1 - 0.047 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF655) CPSase_L_D2 PF02786.17 AID30357.1 - 4.4e-82 274.7 0.1 7.1e-82 274.0 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AID30357.1 - 2.4e-44 150.4 1.7 5e-44 149.3 0.2 2.3 3 0 0 3 3 3 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AID30357.1 - 1.5e-34 118.3 0.0 3.6e-34 117.1 0.0 1.7 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain PCC_BT PF18140.1 AID30357.1 - 1.2e-25 90.3 0.0 3.6e-25 88.8 0.0 1.8 1 0 0 1 1 1 1 Propionyl-coenzyme A carboxylase BT domain Biotin_lipoyl PF00364.22 AID30357.1 - 1.6e-12 47.0 0.4 1.6e-12 47.0 0.4 2.2 3 0 0 3 3 1 1 Biotin-requiring enzyme Dala_Dala_lig_C PF07478.13 AID30357.1 - 8.6e-11 41.7 0.0 1.8e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 AID30357.1 - 1.2e-07 31.4 0.1 3.7e-07 29.9 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 AID30357.1 - 6.1e-07 29.2 0.0 1.7e-06 27.7 0.0 1.8 1 0 0 1 1 1 1 Biotin-lipoyl like RimK PF08443.11 AID30357.1 - 0.00089 18.9 0.1 0.22 11.1 0.0 2.8 3 0 0 3 3 3 1 RimK-like ATP-grasp domain DUF2118 PF09891.9 AID30357.1 - 0.0038 17.2 0.0 0.0087 16.0 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) ATP-grasp_3 PF02655.14 AID30357.1 - 0.0045 17.0 0.0 0.0073 16.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain QRPTase_N PF02749.16 AID30357.1 - 0.007 16.4 0.1 0.028 14.5 0.0 2.0 2 0 0 2 2 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain HlyD_3 PF13437.6 AID30357.1 - 0.011 16.4 0.1 12 6.7 0.0 3.0 2 0 0 2 2 2 0 HlyD family secretion protein ATPgrasp_ST PF14397.6 AID30357.1 - 0.039 13.2 0.0 0.23 10.6 0.0 2.0 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp ATPgrasp_Ter PF15632.6 AID30357.1 - 0.041 13.6 0.1 0.076 12.8 0.1 1.4 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon GARS_A PF01071.19 AID30357.1 - 0.059 13.1 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 AID30357.1 - 0.065 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain ADH_zinc_N PF00107.26 AID30359.1 - 4.5e-19 68.7 0.1 5.8e-19 68.4 0.1 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID30359.1 - 0.0014 19.7 0.0 0.0017 19.4 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase GFA PF04828.14 AID30360.1 - 2.1e-06 28.0 0.2 3.8e-06 27.2 0.2 1.4 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme HypD PF01924.16 AID30360.1 - 0.019 14.1 0.8 0.023 13.8 0.8 1.1 1 0 0 1 1 1 0 Hydrogenase formation hypA family DUF188 PF02639.14 AID30361.1 - 6.8e-44 148.7 0.0 7.8e-44 148.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 PIN_9 PF18477.1 AID30361.1 - 0.0051 17.1 0.2 0.013 15.8 0.1 1.8 2 1 0 2 2 2 1 PIN like domain DUF1345 PF07077.11 AID30362.1 - 1.5e-50 171.3 3.2 1.5e-50 171.3 3.2 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1345) CD47 PF04549.14 AID30362.1 - 0.0041 17.3 1.8 0.0041 17.3 1.8 2.0 2 0 0 2 2 2 1 CD47 transmembrane region DUF4293 PF14126.6 AID30362.1 - 0.0057 16.9 1.0 0.0057 16.9 1.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4293) Holin_9 PF16936.5 AID30362.1 - 0.0082 16.3 1.0 0.0082 16.3 1.0 2.4 3 0 0 3 3 3 1 Putative holin UL16 PF17622.2 AID30362.1 - 0.29 10.7 1.4 1.5 8.5 0.2 2.0 2 0 0 2 2 2 0 Viral unique long protein 16 DUF3844 PF12955.7 AID30362.1 - 0.42 10.8 1.3 0.72 10.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3844) ABC2_membrane_5 PF13346.6 AID30362.1 - 1.5 8.4 12.6 1.3 8.5 6.3 2.7 2 1 0 2 2 2 0 ABC-2 family transporter protein Wzy_C_2 PF11846.8 AID30362.1 - 2.8 7.8 10.2 0.082 12.8 2.3 2.2 3 0 0 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Ni_hydr_CYTB PF01292.20 AID30363.1 - 3.3e-33 114.8 7.1 4.4e-33 114.4 7.1 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AID30363.1 - 8.5e-06 26.2 16.9 8.1e-05 23.1 6.9 3.3 3 0 0 3 3 3 1 Domain of unknown function (DUF4405) ABC2_membrane_3 PF12698.7 AID30363.1 - 0.28 10.2 5.2 0.04 13.0 1.1 1.5 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF962 PF06127.11 AID30363.1 - 1.9 8.6 5.3 45 4.2 5.3 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF4079 PF13301.6 AID30363.1 - 4 7.6 10.3 24 5.1 6.6 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) DUF3433 PF11915.8 AID30363.1 - 5.8 7.4 9.6 5.8 7.4 1.4 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3433) Oxidored_molyb PF00174.19 AID30364.1 - 1.4e-40 138.7 0.0 2e-40 138.2 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain TAT_signal PF10518.9 AID30364.1 - 0.036 13.9 0.3 0.071 13.0 0.3 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Acetyltransf_1 PF00583.25 AID30365.1 - 1.2e-10 41.6 0.1 1.5e-10 41.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID30365.1 - 1.3e-10 41.5 0.0 1.8e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID30365.1 - 3.2e-10 40.0 0.0 3.9e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID30365.1 - 4.6e-06 26.5 0.0 6.7e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 AID30365.1 - 5e-06 27.2 0.0 6.4e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID30365.1 - 0.00054 20.0 0.0 0.00074 19.6 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 AID30365.1 - 0.0012 18.7 0.5 0.79 9.7 0.0 2.3 1 1 1 2 2 2 2 ESCO1/2 acetyl-transferase Acetyltransf_6 PF13480.7 AID30365.1 - 0.0023 18.1 0.6 0.0032 17.6 0.6 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 AID30365.1 - 0.0054 16.3 0.0 0.007 16.0 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_15 PF17013.5 AID30365.1 - 0.016 14.7 0.0 0.039 13.4 0.0 1.5 2 0 0 2 2 2 0 Putative acetyl-transferase Acetyltransf_9 PF13527.7 AID30365.1 - 0.025 14.7 0.1 0.034 14.2 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF4911 PF16256.5 AID30366.1 - 0.12 12.4 0.2 2.9 7.9 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4911) GCV_T PF01571.21 AID30368.1 - 3.7e-76 255.9 0.0 4.9e-76 255.5 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID30368.1 - 5.8e-20 71.0 0.1 1e-19 70.2 0.1 1.4 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID30368.1 - 0.014 15.5 0.0 2.6 8.2 0.0 2.4 1 1 0 2 2 2 0 Sarcosine oxidase, gamma subunit family GCV_H PF01597.19 AID30369.1 - 3.1e-41 140.1 0.1 3.4e-41 140.0 0.1 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 AID30369.1 - 0.0019 18.0 0.2 0.0033 17.2 0.2 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme Glucodextran_B PF09136.10 AID30369.1 - 0.017 15.4 0.6 0.026 14.9 0.6 1.3 1 0 0 1 1 1 0 Glucodextranase, domain B DUF3389 PF11869.8 AID30369.1 - 0.1 12.8 0.1 0.19 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3389) RNaseH_C PF09293.10 AID30369.1 - 0.13 12.7 0.0 0.24 11.8 0.0 1.5 2 0 0 2 2 2 0 T4 RNase H, C terminal GDC-P PF02347.16 AID30370.1 - 4.4e-171 569.5 0.0 7.8e-157 522.5 0.0 2.7 3 0 0 3 3 3 2 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 AID30370.1 - 4e-05 23.1 1.0 0.00016 21.1 0.1 2.0 2 0 0 2 2 2 1 Beta-eliminating lyase Aminotran_5 PF00266.19 AID30370.1 - 0.00027 20.0 0.0 0.00071 18.6 0.0 1.6 1 0 0 1 1 1 1 Aminotransferase class-V GGDEF PF00990.21 AID30371.1 - 9.8e-31 106.7 0.0 1.9e-30 105.7 0.0 1.5 1 1 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Vma12 PF11712.8 AID30371.1 - 4.5 7.3 8.7 0.14 12.3 0.7 2.1 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TPR_2 PF07719.17 AID30372.1 - 1.9e-08 33.8 9.0 0.0058 16.6 0.5 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 AID30372.1 - 1.2e-07 32.2 7.3 0.00015 22.3 3.7 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID30372.1 - 9e-07 28.5 7.0 0.011 15.5 0.3 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID30372.1 - 1.5e-05 24.8 2.7 0.65 10.4 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 AID30372.1 - 3.3e-05 24.3 5.6 0.00036 21.0 2.1 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 AID30372.1 - 0.00013 22.1 0.9 0.035 14.5 0.0 3.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 AID30372.1 - 0.00016 21.3 0.3 0.0014 18.2 0.1 2.3 1 1 1 2 2 2 1 TPR repeat TPR_14 PF13428.6 AID30372.1 - 0.0014 19.3 5.4 0.0056 17.4 1.1 2.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 AID30372.1 - 0.0015 18.8 5.0 0.036 14.3 1.8 2.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 AID30372.1 - 0.0083 16.1 3.2 0.53 10.4 0.1 3.1 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 AID30372.1 - 0.045 14.4 0.1 40 5.2 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 AID30372.1 - 0.24 11.3 3.1 6 6.9 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 AID30372.1 - 0.36 11.6 6.8 7 7.5 0.2 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat T2SSF PF00482.23 AID30374.1 - 6.6e-20 71.3 2.6 6.6e-20 71.3 2.6 2.6 3 1 1 4 4 4 1 Type II secretion system (T2SS), protein F Phage_holin_8 PF16931.5 AID30374.1 - 0.02 14.9 0.5 0.04 13.9 0.5 1.4 1 0 0 1 1 1 0 Putative phage holin T2SSF PF00482.23 AID30375.1 - 1.3e-19 70.4 0.4 1.3e-19 70.4 0.4 2.6 2 1 0 2 2 2 1 Type II secretion system (T2SS), protein F SAM_4 PF18017.1 AID30375.1 - 0.048 13.6 0.0 0.099 12.6 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF2269 PF10027.9 AID30375.1 - 0.18 11.9 7.6 0.16 12.0 1.3 3.0 3 0 0 3 3 3 0 Predicted integral membrane protein (DUF2269) Phage_holin_3_6 PF07332.11 AID30375.1 - 3.5 7.7 10.1 8.3 6.5 3.5 3.0 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III T2SSE PF00437.20 AID30376.1 - 1.2e-82 277.1 1.3 1.8e-82 276.5 1.3 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 AID30376.1 - 9.9e-05 22.9 0.0 0.00028 21.4 0.0 1.8 1 1 0 1 1 1 1 ABC transporter AAA_30 PF13604.6 AID30376.1 - 0.00057 19.7 1.1 0.00093 19.0 0.1 1.8 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AID30376.1 - 0.0012 18.8 0.0 0.0022 17.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_28 PF13521.6 AID30376.1 - 0.0014 18.9 0.0 0.0037 17.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID30376.1 - 0.0018 18.5 0.1 0.092 13.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID30376.1 - 0.0021 17.8 0.1 0.0047 16.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID30376.1 - 0.0026 18.3 0.2 0.0053 17.3 0.2 1.4 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 AID30376.1 - 0.0087 15.4 1.0 0.027 13.8 0.0 2.2 3 0 0 3 3 3 1 FtsK/SpoIIIE family AAA_7 PF12775.7 AID30376.1 - 0.011 15.2 0.0 0.026 14.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 AID30376.1 - 0.013 15.9 0.0 0.034 14.5 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 AID30376.1 - 0.02 13.8 0.2 0.073 12.0 0.1 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_19 PF13245.6 AID30376.1 - 0.021 15.2 4.0 0.035 14.4 2.4 2.3 2 1 0 2 2 2 0 AAA domain MukB PF04310.12 AID30376.1 - 0.024 14.5 0.4 0.45 10.3 0.1 2.3 2 0 0 2 2 2 0 MukB N-terminal Zeta_toxin PF06414.12 AID30376.1 - 0.041 13.1 0.0 0.083 12.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Sigma54_activat PF00158.26 AID30376.1 - 0.043 13.5 0.2 0.14 11.8 0.1 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 AID30376.1 - 0.061 12.7 0.1 0.12 11.7 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_15 PF13175.6 AID30376.1 - 0.1 12.3 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 AID30376.1 - 0.11 12.0 0.0 0.24 11.0 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PIF1 PF05970.14 AID30376.1 - 0.12 11.6 0.1 1.2 8.2 0.0 2.0 2 0 0 2 2 2 0 PIF1-like helicase DAP3 PF10236.9 AID30376.1 - 0.12 11.5 0.0 0.65 9.1 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 ATP-synt_ab PF00006.25 AID30376.1 - 0.15 11.7 0.7 0.74 9.4 0.7 2.0 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF2075 PF09848.9 AID30376.1 - 0.19 10.9 0.0 0.77 8.9 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Response_reg PF00072.24 AID30377.1 - 1e-07 32.1 1.1 2.2e-07 31.1 0.8 1.7 2 0 0 2 2 2 1 Response regulator receiver domain AAA_31 PF13614.6 AID30377.1 - 1.1e-05 25.4 0.1 0.00024 21.1 0.0 2.7 2 1 0 2 2 2 1 AAA domain ParA PF10609.9 AID30377.1 - 0.016 14.7 0.0 0.1 12.1 0.0 2.1 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 AID30377.1 - 0.048 12.9 0.6 0.81 8.9 0.0 2.3 2 1 0 2 2 2 0 ATPase MipZ CBP_BcsQ PF06564.12 AID30377.1 - 0.1 12.1 1.0 0.92 8.9 0.4 2.6 2 1 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Secretin PF00263.21 AID30379.1 - 4.5e-44 150.1 0.1 1.1e-43 148.8 0.0 1.7 2 0 0 2 2 2 1 Bacterial type II and III secretion system protein T2SS-T3SS_pil_N PF13629.6 AID30379.1 - 7.2e-14 51.3 0.6 1.6e-13 50.2 0.2 1.9 2 0 0 2 2 2 1 Pilus formation protein N terminal region BON PF04972.17 AID30379.1 - 8e-12 45.3 1.2 2.6e-11 43.7 1.2 1.9 1 0 0 1 1 1 1 BON domain Muraidase PF11860.8 AID30379.1 - 0.18 12.0 0.0 0.52 10.5 0.0 1.7 2 0 0 2 2 2 0 N-acetylmuramidase RcpC PF16976.5 AID30380.1 - 1.1e-29 102.8 5.4 1.9e-29 102.1 5.4 1.4 1 0 0 1 1 1 1 Flp pilus assembly protein RcpC/CpaB SAF PF08666.12 AID30380.1 - 3.8e-08 33.8 1.1 6.7e-08 33.1 0.0 2.0 3 0 0 3 3 3 1 SAF domain DNA_gyraseB PF00204.25 AID30381.1 - 2.4e-39 134.6 0.0 3.8e-39 133.9 0.0 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 AID30381.1 - 1.9e-23 82.4 1.0 3.6e-23 81.5 1.0 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 AID30381.1 - 2.2e-18 66.8 0.1 4.1e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 AID30381.1 - 2.6e-17 62.9 0.0 5e-17 62.0 0.0 1.4 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 AID30381.1 - 5.8e-05 22.9 0.0 0.0036 17.1 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID30381.1 - 0.027 14.4 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain FUSC PF04632.12 AID30382.1 - 1.3e-174 582.4 47.8 1.4e-174 582.3 47.8 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 AID30382.1 - 3e-15 56.4 39.7 4e-15 56.1 15.7 2.7 2 0 0 2 2 2 2 Fusaric acid resistance protein-like ALMT PF11744.8 AID30382.1 - 1.1e-09 37.6 8.5 1.9e-09 36.9 8.5 1.3 1 0 0 1 1 1 1 Aluminium activated malate transporter ArAE_1 PF06081.11 AID30382.1 - 0.003 17.7 6.9 0.003 17.7 6.9 3.1 3 1 0 3 3 3 1 Aromatic acid exporter family member 1 DUF4677 PF15726.5 AID30382.1 - 0.12 12.5 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4677) DUF2336 PF10098.9 AID30383.1 - 2.8e-53 181.1 17.1 2.8e-53 181.1 17.1 1.9 2 0 0 2 2 2 1 Uncharacterised protein conserved in bacteria (DUF2336) HEAT_2 PF13646.6 AID30383.1 - 0.01 16.2 1.4 0.01 16.2 1.4 3.9 5 0 0 5 5 5 0 HEAT repeats HEAT_EZ PF13513.6 AID30383.1 - 0.097 13.2 7.1 0.15 12.6 3.0 3.4 3 0 0 3 3 3 0 HEAT-like repeat HEAT PF02985.22 AID30383.1 - 0.28 11.5 7.6 1.4 9.4 0.2 4.5 5 0 0 5 5 5 0 HEAT repeat MaoC_dehydratas PF01575.19 AID30384.1 - 8.3e-22 77.0 0.2 1e-21 76.7 0.2 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID30384.1 - 5.3e-08 33.1 0.0 7.4e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT_2 PF13279.6 AID30384.1 - 0.023 15.2 0.0 0.036 14.5 0.0 1.3 1 1 0 1 1 1 0 Thioesterase-like superfamily HpcH_HpaI PF03328.14 AID30385.1 - 6.5e-41 139.9 0.5 1.1e-40 139.1 0.5 1.4 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 AID30385.1 - 5.8e-13 48.7 0.0 1.2e-09 37.7 0.0 2.3 1 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold Malate_synthase PF01274.22 AID30385.1 - 0.0012 17.2 0.0 1.2 7.3 0.0 3.0 2 1 1 3 3 3 3 Malate synthase Castor_Poll_mid PF06241.12 AID30386.1 - 1.3e-26 92.6 0.0 7.2e-22 77.3 0.0 3.1 2 1 0 2 2 2 2 Castor and Pollux, part of voltage-gated ion channel PEMT PF04191.13 AID30387.1 - 1.6e-17 63.8 1.8 1.6e-17 63.8 1.8 2.5 3 0 0 3 3 3 1 Phospholipid methyltransferase ICMT PF04140.14 AID30387.1 - 3.8e-09 36.9 0.6 3.8e-09 36.9 0.6 2.0 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Steroid_dh PF02544.16 AID30387.1 - 9.9e-06 25.6 0.8 1.6e-05 24.9 0.8 1.4 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ERG4_ERG24 PF01222.17 AID30387.1 - 7.1e-05 21.7 0.1 9.6e-05 21.3 0.1 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 AID30387.1 - 0.00056 19.5 0.7 0.00056 19.5 0.7 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1295) TetR_N PF00440.23 AID30388.1 - 4.4e-18 64.8 0.2 9.9e-18 63.7 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_27 PF17935.1 AID30388.1 - 9.6e-05 22.4 1.3 0.0007 19.6 0.2 2.8 2 2 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 AID30388.1 - 0.16 12.2 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase Flavin_Reduct PF01613.18 AID30389.1 - 8.7e-20 71.3 0.0 1.1e-19 71.0 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain Nitroreductase PF00881.24 AID30390.1 - 8.4e-29 100.8 0.0 1e-28 100.5 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family CarboxypepD_reg PF13620.6 AID30391.1 - 0.00019 21.6 0.6 1.1 9.6 0.0 3.3 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain Acyltransferase PF01553.21 AID30392.1 - 2.2e-07 30.6 0.0 3.5e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase tRNA-synt_2b PF00587.25 AID30393.1 - 3.8e-40 137.8 0.0 6.6e-40 137.0 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 AID30393.1 - 3.7e-19 68.6 1.0 1e-18 67.3 1.0 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 AID30393.1 - 3.9e-14 52.5 0.0 7.5e-14 51.6 0.0 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain TGS PF02824.21 AID30393.1 - 9e-05 22.5 0.0 0.00019 21.4 0.0 1.6 1 0 0 1 1 1 1 TGS domain LCM PF04072.14 AID30394.1 - 4.5e-50 170.2 0.1 7.3e-50 169.5 0.1 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Transpeptidase PF00905.22 AID30395.1 - 4.5e-44 150.9 0.0 6.1e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain Beta-lactamase2 PF13354.6 AID30395.1 - 0.033 13.8 0.0 3.7 7.1 0.0 2.2 2 0 0 2 2 2 0 Beta-lactamase enzyme family YidD PF01809.18 AID30396.1 - 1.1e-22 79.7 0.1 1.5e-22 79.3 0.1 1.2 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor Resolvase PF00239.21 AID30397.1 - 1.4e-22 80.4 0.5 1.4e-22 80.4 0.5 1.9 2 0 0 2 2 2 1 Resolvase, N terminal domain Recombinase PF07508.13 AID30397.1 - 7e-16 58.5 0.0 1.5e-15 57.4 0.0 1.6 1 0 0 1 1 1 1 Recombinase Zn_ribbon_recom PF13408.6 AID30397.1 - 5.6e-10 39.6 0.3 1e-09 38.7 0.3 1.5 1 0 0 1 1 1 1 Recombinase zinc beta ribbon domain Peptidase_M41 PF01434.18 AID30399.1 - 1.2e-17 64.4 1.3 3e-17 63.1 1.3 1.6 1 1 0 1 1 1 1 Peptidase family M41 Peptidase_M50B PF13398.6 AID30399.1 - 0.058 13.0 0.4 0.091 12.4 0.4 1.3 1 0 0 1 1 1 0 Peptidase M50B-like DUF29 PF01724.16 AID30399.1 - 0.21 11.8 0.1 0.42 10.9 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function DUF29 AAA PF00004.29 AID30401.1 - 2.1e-32 112.3 0.0 4.1e-32 111.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 AID30401.1 - 2.4e-05 24.1 0.0 5.8e-05 22.9 0.0 1.7 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 AID30401.1 - 0.0008 19.4 0.0 0.0062 16.5 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 AID30401.1 - 0.0014 18.8 0.0 0.0025 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID30401.1 - 0.0015 19.0 0.0 0.047 14.1 0.0 2.8 2 1 1 3 3 3 1 AAA ATPase domain AAA_2 PF07724.14 AID30401.1 - 0.0022 18.2 0.0 0.0034 17.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 AID30401.1 - 0.012 15.3 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID30401.1 - 0.019 15.2 0.0 0.28 11.4 0.0 2.2 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID30401.1 - 0.029 14.1 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 AID30401.1 - 0.03 14.9 0.0 0.053 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 AID30401.1 - 0.036 14.1 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activ_2 PF14532.6 AID30401.1 - 0.04 14.0 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 AID30401.1 - 0.043 14.2 0.0 0.079 13.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_11 PF13086.6 AID30401.1 - 0.044 13.6 0.0 0.07 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID30401.1 - 0.058 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 AID30401.1 - 0.065 12.9 0.0 0.42 10.3 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 AID30401.1 - 0.078 12.4 0.0 0.19 11.1 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 AID30401.1 - 0.16 11.5 0.0 0.41 10.1 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Pab87_oct PF13969.6 AID30403.1 - 0.058 13.5 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Pab87 octamerisation domain HTH_Crp_2 PF13545.6 AID30404.1 - 7.6e-14 51.4 0.2 1.5e-13 50.5 0.2 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain cNMP_binding PF00027.29 AID30404.1 - 0.00021 21.3 0.1 0.00047 20.2 0.1 1.7 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MarR_2 PF12802.7 AID30404.1 - 0.0088 15.9 0.1 0.015 15.1 0.1 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 AID30404.1 - 0.036 14.4 0.0 0.067 13.5 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator Phage_rep_org_N PF09681.10 AID30404.1 - 0.21 11.5 0.0 0.37 10.7 0.0 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) BON PF04972.17 AID30407.1 - 2.2e-11 43.9 0.3 2.6e-11 43.7 0.3 1.1 1 0 0 1 1 1 1 BON domain BON PF04972.17 AID30408.1 - 2.3e-16 59.8 1.0 3.3e-16 59.4 1.0 1.2 1 0 0 1 1 1 1 BON domain Host_attach PF10116.9 AID30410.1 - 4.3e-17 63.0 0.3 4.8e-17 62.8 0.3 1.0 1 0 0 1 1 1 1 Protein required for attachment to host cells baeRF_family12 PF18856.1 AID30410.1 - 1.7e-15 57.8 0.1 1.9e-15 57.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 baeRF_family10 PF18854.1 AID30410.1 - 0.075 13.3 0.1 0.078 13.2 0.1 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family3 PF18845.1 AID30410.1 - 0.11 12.7 0.0 0.12 12.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 3 DUF1357 PF07094.11 AID30410.1 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1357) CarS-like PF01864.17 AID30411.1 - 7.9e-07 29.2 0.1 8.8e-07 29.1 0.1 1.1 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 AID30411.1 - 0.095 12.4 0.1 0.095 12.4 0.1 1.5 2 0 0 2 2 2 0 Cytidylyltransferase family COX7C PF02935.16 AID30411.1 - 0.12 12.6 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Transposase_mut PF00872.18 AID30412.1 - 8.8e-60 202.6 0.0 1e-59 202.3 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 AID30412.1 - 3.3e-05 24.2 0.0 7.1e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.6 AID30412.1 - 0.13 12.5 0.0 0.45 10.7 0.0 1.8 1 1 1 2 2 2 0 DDE domain Nitroreductase PF00881.24 AID30414.1 - 1.6e-32 112.9 0.0 1.8e-32 112.7 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 AID30414.1 - 1.9e-18 66.9 0.0 1.8e-06 27.7 0.0 3.0 1 1 2 3 3 3 3 Putative TM nitroreductase Lysine_decarbox PF03641.14 AID30415.1 - 1.8e-30 105.7 0.0 2.5e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 AID30415.1 - 9.3e-07 28.6 0.0 1.5e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family PhoR PF11808.8 AID30415.1 - 0.14 12.6 0.0 0.28 11.6 0.0 1.4 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR Nitroreductase PF00881.24 AID30416.1 - 6.1e-19 68.7 0.1 6.7e-19 68.6 0.1 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 AID30416.1 - 0.044 13.4 0.0 0.049 13.2 0.0 1.1 1 0 0 1 1 1 0 Putative TM nitroreductase Phage_holin_3_5 PF16085.5 AID30416.1 - 0.09 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III Cpn60_TCP1 PF00118.24 AID30417.1 - 2.6e-89 300.1 14.9 8.7e-89 298.4 14.9 1.7 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family Usp PF00582.26 AID30418.1 - 9.6e-13 48.8 2.1 2.9e-05 24.6 0.3 2.8 2 1 0 2 2 2 2 Universal stress protein family DinB_2 PF12867.7 AID30418.1 - 0.11 13.1 0.2 0.18 12.3 0.2 1.5 1 1 0 1 1 1 0 DinB superfamily Flavin_Reduct PF01613.18 AID30419.1 - 2e-23 83.2 0.1 2.5e-23 82.8 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Usp PF00582.26 AID30420.1 - 4.3e-10 40.3 4.3 5.9e-05 23.6 0.0 3.1 2 1 1 3 3 3 3 Universal stress protein family ChaB PF06150.12 AID30421.1 - 2.2e-22 79.4 0.1 2.5e-22 79.2 0.1 1.1 1 0 0 1 1 1 1 ChaB baeRF_family12 PF18856.1 AID30422.1 - 6e-22 78.7 0.1 7e-22 78.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 Host_attach PF10116.9 AID30422.1 - 7.7e-22 78.4 0.2 1.5e-21 77.4 0.2 1.4 1 1 0 1 1 1 1 Protein required for attachment to host cells baeRF_family10 PF18854.1 AID30422.1 - 1.9e-05 25.0 0.3 2.9e-05 24.3 0.3 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family2 PF18844.1 AID30422.1 - 0.0017 18.4 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 2 BON PF04972.17 AID30423.1 - 1.1e-49 166.6 18.2 8.8e-17 61.2 3.3 3.1 3 0 0 3 3 3 3 BON domain Yop-YscD_ppl PF16693.5 AID30423.1 - 0.0035 16.8 1.1 0.024 14.1 0.2 1.9 1 1 1 2 2 2 1 Inner membrane component of T3SS, periplasmic domain Glyco_hydro_20b PF02838.15 AID30423.1 - 0.0042 17.9 1.3 0.0063 17.3 0.2 1.7 2 0 0 2 2 2 1 Glycosyl hydrolase family 20, domain 2 DUF5376 PF17346.2 AID30423.1 - 0.14 12.5 0.7 5.5 7.4 0.1 2.8 1 1 1 3 3 3 0 Family of unknown function (DUF5376) Putative_PNPOx PF01243.20 AID30424.1 - 1.7e-11 44.1 0.0 2.6e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 AID30424.1 - 0.00056 19.9 0.0 0.0028 17.6 0.0 2.0 2 1 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 AID30424.1 - 0.014 15.0 0.0 0.027 14.1 0.0 1.4 2 0 0 2 2 2 0 Pyridoxamine 5'-phosphate oxidase like Peptidase_M41 PF01434.18 AID30425.1 - 4.9e-58 196.1 0.0 1.2e-57 194.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family M41 AAA PF00004.29 AID30425.1 - 1.8e-42 144.9 0.0 3.9e-42 143.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 AID30425.1 - 6.8e-16 57.8 0.1 1.7e-15 56.5 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain TIP49 PF06068.13 AID30425.1 - 3.8e-05 23.1 0.0 6.3e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain FtsH_ext PF06480.15 AID30425.1 - 9.8e-05 22.7 0.1 0.0024 18.2 0.0 2.5 2 0 0 2 2 2 1 FtsH Extracellular AAA_16 PF13191.6 AID30425.1 - 0.00018 21.9 3.4 0.013 15.9 0.1 3.0 3 1 0 4 4 3 1 AAA ATPase domain AAA_5 PF07728.14 AID30425.1 - 0.00035 20.6 0.1 0.0018 18.3 0.0 2.3 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 AID30425.1 - 0.00044 20.5 0.0 0.082 13.2 0.1 2.7 1 1 1 2 2 2 1 AAA domain RuvB_N PF05496.12 AID30425.1 - 0.00064 19.5 0.0 0.0019 17.9 0.0 1.8 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 AID30425.1 - 0.0043 16.8 0.0 0.0084 15.9 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 AID30425.1 - 0.0096 16.1 0.0 0.037 14.2 0.0 2.0 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.6 AID30425.1 - 0.011 16.2 0.1 0.24 11.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 AID30425.1 - 0.021 15.3 0.0 0.067 13.6 0.0 2.0 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID30425.1 - 0.023 14.1 0.3 0.048 13.0 0.3 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Peptidase_M50B PF13398.6 AID30425.1 - 0.041 13.5 2.4 0.12 12.0 0.0 2.4 3 0 0 3 3 3 0 Peptidase M50B-like AAA_28 PF13521.6 AID30425.1 - 0.044 14.0 0.1 0.15 12.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 AID30425.1 - 0.067 13.2 0.0 0.29 11.1 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 AID30425.1 - 0.094 12.0 0.1 0.64 9.3 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_2 PF07724.14 AID30425.1 - 0.15 12.1 0.0 0.34 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 AID30425.1 - 0.15 11.5 0.1 0.44 10.0 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region CBS PF00571.28 AID30426.1 - 5.7e-30 103.5 3.6 4.8e-17 62.2 1.2 2.4 2 0 0 2 2 2 2 CBS domain BON PF04972.17 AID30426.1 - 2.9e-13 49.9 1.2 6e-13 48.9 1.2 1.5 1 0 0 1 1 1 1 BON domain H_kinase_N PF12282.8 AID30426.1 - 0.1 12.6 0.3 0.2 11.6 0.3 1.5 1 0 0 1 1 1 0 Signal transduction histidine kinase HlyD_D23 PF16576.5 AID30427.1 - 5e-26 91.2 7.2 2.4e-23 82.5 7.2 2.3 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID30427.1 - 2.4e-17 63.5 3.9 1.2e-13 51.7 0.3 2.6 2 0 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID30427.1 - 7.5e-12 44.9 1.4 5.8e-10 38.8 0.9 4.8 5 0 0 5 5 5 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID30427.1 - 3.3e-05 23.6 0.1 0.0026 17.6 0.1 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme HlyD PF00529.20 AID30427.1 - 0.00072 19.4 6.9 0.0021 17.9 6.9 1.9 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS PTS_EIIA_1 PF00358.20 AID30427.1 - 0.056 13.2 0.0 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Cob_adeno_trans PF01923.18 AID30427.1 - 0.11 12.6 3.1 4.5 7.4 3.0 2.3 1 1 1 2 2 2 0 Cobalamin adenosyltransferase AAA_33 PF13671.6 AID30427.1 - 0.19 11.9 3.9 1.3 9.1 0.3 2.3 1 1 1 2 2 2 0 AAA domain OEP PF02321.18 AID30427.1 - 0.42 10.4 23.1 0.67 9.7 15.5 2.9 2 1 0 2 2 2 0 Outer membrane efflux protein FtsX PF02687.21 AID30428.1 - 6.9e-12 45.7 2.7 6.9e-12 45.7 2.7 3.3 2 1 1 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 AID30428.1 - 2.7e-11 44.2 7.9 2.7e-11 44.2 7.9 2.2 2 1 0 2 2 2 1 MacB-like periplasmic core domain LptF_LptG PF03739.14 AID30428.1 - 0.00045 19.2 1.3 0.00045 19.2 1.3 2.0 2 0 0 2 2 2 1 Lipopolysaccharide export system permease LptF/LptG ABC_tran PF00005.27 AID30429.1 - 3.6e-31 108.5 0.0 4.6e-31 108.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30429.1 - 1.2e-07 31.8 0.8 0.012 15.5 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30429.1 - 1.4e-07 31.2 0.0 1.7e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30429.1 - 2.3e-05 24.0 0.0 4.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30429.1 - 0.00055 19.9 0.1 0.0009 19.2 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID30429.1 - 0.00097 19.6 0.1 0.0022 18.4 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 AID30429.1 - 0.0018 17.9 0.1 0.23 11.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 AID30429.1 - 0.0027 17.5 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_22 PF13401.6 AID30429.1 - 0.004 17.4 0.1 0.019 15.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 AID30429.1 - 0.0046 16.1 0.0 0.0066 15.6 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein MMR_HSR1 PF01926.23 AID30429.1 - 0.022 14.8 0.2 0.15 12.1 0.0 2.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 AID30429.1 - 0.056 13.9 0.0 0.09 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID30429.1 - 0.072 13.6 0.1 0.21 12.1 0.1 1.9 1 1 1 2 2 2 0 AAA domain AAA_30 PF13604.6 AID30429.1 - 0.13 12.0 0.1 0.42 10.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 AID30429.1 - 0.17 12.2 0.4 3.5 7.9 0.3 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 AID30429.1 - 0.3 11.3 1.2 0.63 10.2 1.2 1.9 1 1 0 1 1 1 0 AAA domain HSP20 PF00011.21 AID30431.1 - 3e-29 101.2 2.0 3.9e-29 100.8 2.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID30431.1 - 1.7e-13 49.9 0.0 3e-13 49.1 0.0 1.5 1 0 0 1 1 1 1 HSP20-like domain found in ArsA FKBP26_C PF18046.1 AID30431.1 - 0.004 17.2 1.4 0.78 9.9 0.1 2.3 2 0 0 2 2 2 2 FKBP26_C-terminal CS PF04969.16 AID30431.1 - 0.0049 17.9 0.7 0.0092 17.0 0.6 1.5 1 1 0 1 1 1 1 CS domain HMA PF00403.26 AID30431.1 - 0.013 15.9 0.6 0.19 12.2 0.1 2.2 2 0 0 2 2 2 0 Heavy-metal-associated domain MFS_1 PF07690.16 AID30432.1 - 2.7e-46 158.1 61.5 1.4e-34 119.6 34.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30432.1 - 2.3e-18 66.3 20.8 1.1e-11 44.3 3.2 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID30432.1 - 2.4e-07 30.0 15.9 0.0024 16.8 9.4 2.4 1 1 1 2 2 2 2 MFS_1 like family Gram_pos_anchor PF00746.21 AID30432.1 - 0.049 13.6 1.3 0.049 13.6 1.3 4.1 4 0 0 4 4 4 0 LPXTG cell wall anchor motif LacY_symp PF01306.19 AID30432.1 - 3.9 6.1 12.7 0.054 12.3 1.6 2.7 2 2 0 2 2 2 0 LacY proton/sugar symporter CBS PF00571.28 AID30433.1 - 5.4e-32 110.0 10.0 2.9e-16 59.7 0.6 2.9 3 1 0 3 3 3 2 CBS domain BON PF04972.17 AID30433.1 - 1.9e-11 44.1 7.4 4.2e-11 43.0 7.4 1.6 1 0 0 1 1 1 1 BON domain PRC PF05239.16 AID30433.1 - 0.06 13.4 0.1 0.69 10.0 0.0 2.3 2 0 0 2 2 2 0 PRC-barrel domain Clathrin_H_link PF13838.6 AID30433.1 - 0.13 12.2 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Clathrin-H-link PPDK_N PF01326.19 AID30434.1 - 2.1e-111 372.4 0.0 4.3e-111 371.3 0.0 1.5 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 AID30434.1 - 4.2e-64 216.5 0.0 7.3e-64 215.7 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 AID30434.1 - 1.3e-24 85.7 1.1 3.9e-24 84.2 1.1 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Pribosyltran PF00156.27 AID30435.1 - 1.2e-28 99.6 0.0 3.3e-28 98.2 0.0 1.6 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID30435.1 - 1.5e-05 24.6 0.0 3.6e-05 23.3 0.0 1.6 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 AID30435.1 - 0.0055 16.2 0.0 0.0089 15.5 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase Pribosyltran_N PF13793.6 AID30438.1 - 6.3e-31 106.7 0.1 3.4e-30 104.4 0.0 2.1 2 1 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 AID30438.1 - 7.5e-14 52.2 0.1 1.6e-13 51.1 0.1 1.5 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 AID30438.1 - 7.4e-12 45.1 0.1 2.1e-11 43.6 0.1 1.7 2 0 0 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID30438.1 - 0.099 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase YbgT_YccB PF08173.11 AID30439.1 - 5.8 7.1 6.1 0.76 10.0 2.0 1.7 2 0 0 2 2 2 0 Membrane bound YbgT-like protein HTH_Crp_2 PF13545.6 AID30441.1 - 4.3e-15 55.4 0.3 8.5e-15 54.5 0.3 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain cNMP_binding PF00027.29 AID30441.1 - 5.3e-09 36.0 0.0 1.3e-08 34.8 0.0 1.7 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Crp PF00325.20 AID30441.1 - 0.0035 17.0 0.0 0.011 15.4 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family Rrf2 PF02082.20 AID30441.1 - 0.0082 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 AID30441.1 - 0.089 12.4 0.0 0.21 11.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Usp PF00582.26 AID30442.1 - 4.5e-10 40.2 1.1 0.00068 20.2 0.1 2.9 2 1 0 2 2 2 2 Universal stress protein family GH114_assoc PF14741.6 AID30442.1 - 0.12 12.6 0.0 0.6 10.3 0.0 2.1 2 0 0 2 2 2 0 N-terminal glycosyl-hydrolase-114-associated domain RPOL_N PF14700.6 AID30442.1 - 0.3 10.5 0.3 0.44 9.9 0.3 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase N-terminal NOG1 PF06858.14 AID30443.1 - 0.022 14.5 0.0 0.09 12.6 0.0 1.9 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) Rubrerythrin PF02915.17 AID30444.1 - 0.022 15.2 0.4 0.028 14.8 0.4 1.2 1 0 0 1 1 1 0 Rubrerythrin adh_short_C2 PF13561.6 AID30445.1 - 1.6e-66 224.3 2.5 1.8e-66 224.1 2.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID30445.1 - 2.9e-50 170.5 1.7 3.3e-50 170.3 1.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID30445.1 - 2.7e-06 27.4 0.9 4e-06 26.9 0.9 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID30445.1 - 0.16 11.9 0.6 0.22 11.4 0.6 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BON PF04972.17 AID30446.1 - 3e-07 30.6 0.1 3.4e-07 30.5 0.1 1.0 1 0 0 1 1 1 1 BON domain BON PF04972.17 AID30448.1 - 2.1e-30 104.8 4.5 2.2e-18 66.3 0.9 2.0 2 0 0 2 2 2 2 BON domain PDZ_4 PF17816.1 AID30448.1 - 0.071 13.5 0.3 0.17 12.3 0.2 1.6 1 1 0 1 1 1 0 PDZ domain Whi5 PF08528.11 AID30448.1 - 0.08 12.6 0.6 0.14 11.8 0.6 1.4 1 0 0 1 1 1 0 Whi5 like Sel1 PF08238.12 AID30451.1 - 1.6e-20 73.1 14.4 8.1e-10 39.1 1.0 4.9 4 2 1 5 5 5 3 Sel1 repeat BNR PF02012.20 AID30455.1 - 3.6e-06 26.1 0.1 0.073 13.1 0.0 2.6 2 0 0 2 2 2 2 BNR/Asp-box repeat PSII_BNR PF14870.6 AID30455.1 - 0.00025 20.4 0.5 0.0029 16.9 0.1 1.9 1 1 1 2 2 2 1 Photosynthesis system II assembly factor YCF48 Gmad1 PF10647.9 AID30455.1 - 0.19 11.4 0.0 0.2 11.4 0.0 1.0 1 0 0 1 1 1 0 Lipoprotein LpqB beta-propeller domain MCRA PF06100.11 AID30456.1 - 3.1e-11 42.8 0.1 3e-09 36.2 0.0 2.0 1 1 1 2 2 2 2 MCRA family MCRA PF06100.11 AID30457.1 - 1.2e-50 172.7 0.0 1.4e-50 172.5 0.0 1.0 1 0 0 1 1 1 1 MCRA family UvrD_C PF13361.6 AID30462.1 - 2.6e-10 40.2 0.0 4.3e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 AID30462.1 - 1.6e-06 27.8 0.1 9.9e-06 25.3 0.1 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 AID30462.1 - 0.0065 16.2 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase HEPN_RiboL-PSP PF18735.1 AID30463.1 - 0.11 12.4 0.8 0.41 10.5 0.8 1.8 1 1 0 1 1 1 0 RiboL-PSP-HEPN DUF2321 PF10083.9 AID30463.1 - 0.16 11.6 1.4 12 5.5 0.0 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) Zn-ribbon_8 PF09723.10 AID30463.1 - 0.17 12.0 1.3 6.4 7.0 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain LysR_substrate PF03466.20 AID30466.1 - 1e-24 87.1 3.8 1.1e-24 86.9 3.8 1.0 1 0 0 1 1 1 1 LysR substrate binding domain NifU_N PF01592.16 AID30467.1 - 2.3e-08 34.2 0.5 4.8e-08 33.2 0.5 1.6 1 1 0 1 1 1 1 NifU-like N terminal domain GTP_cyclohydroI PF01227.22 AID30468.1 - 6.9e-76 253.6 0.1 8e-76 253.4 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 AID30468.1 - 0.043 14.0 0.0 0.078 13.1 0.0 1.4 1 0 0 1 1 1 0 QueF-like protein Spike_torovirin PF17072.5 AID30468.1 - 0.1 9.7 0.0 0.13 9.4 0.0 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein PRA-CH PF01502.18 AID30469.1 - 5.6e-34 115.8 0.7 7.5e-34 115.4 0.7 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Patatin PF01734.22 AID30470.1 - 1e-24 87.9 1.5 2e-24 86.9 1.5 1.4 1 1 0 1 1 1 1 Patatin-like phospholipase DHHA1 PF02272.19 AID30471.1 - 1e-21 77.8 0.9 2.2e-21 76.7 0.9 1.6 1 0 0 1 1 1 1 DHHA1 domain RecJ_OB PF17768.1 AID30471.1 - 1.1e-09 38.5 0.0 1.9e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 RecJ OB domain DHH PF01368.20 AID30471.1 - 3.9e-09 36.7 0.0 7.4e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 DHH family FmrO PF07091.11 AID30471.1 - 0.03 13.9 0.1 0.056 13.0 0.1 1.4 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) DUF2214 PF09980.9 AID30471.1 - 0.052 13.3 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) FBPase_glpX PF03320.13 AID30473.1 - 1.8e-137 457.3 9.6 2.1e-137 457.1 9.6 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Ribosomal_S12 PF17487.2 AID30475.1 - 0.0054 17.4 5.3 0.006 17.3 5.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S12 SLATT_5 PF18160.1 AID30475.1 - 1.8 7.9 5.6 1.9 7.7 5.6 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF883 PF05957.13 AID30476.1 - 1.6e-06 28.6 3.9 2.5e-06 28.0 3.5 1.5 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Apolipoprotein PF01442.18 AID30476.1 - 1.4e-05 25.0 3.5 1.7e-05 24.8 3.5 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain OmpH PF03938.14 AID30476.1 - 0.00089 19.6 3.2 0.0012 19.2 3.2 1.1 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) IFT57 PF10498.9 AID30476.1 - 0.0062 15.5 0.9 0.0069 15.4 0.9 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 IKBKB_SDD PF18397.1 AID30476.1 - 0.0065 15.8 0.5 0.0078 15.5 0.5 1.1 1 0 0 1 1 1 1 IQBAL scaffold dimerization domain Flagellin_N PF00669.20 AID30476.1 - 0.013 15.6 2.7 0.34 11.0 0.2 2.1 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region WXG100 PF06013.12 AID30476.1 - 0.014 15.6 3.9 0.02 15.1 3.9 1.1 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF5601 PF18151.1 AID30476.1 - 0.016 15.5 0.3 0.16 12.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5601) AIP3 PF03915.13 AID30476.1 - 0.019 14.1 3.2 0.024 13.7 3.2 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 HAUS5 PF14817.6 AID30476.1 - 0.02 13.7 3.2 0.024 13.4 3.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 ApoO PF09769.9 AID30476.1 - 0.02 14.9 0.3 0.095 12.7 0.3 1.8 1 1 0 1 1 1 0 Apolipoprotein O Clathrin_lg_ch PF01086.17 AID30476.1 - 0.021 14.9 1.8 0.026 14.6 1.8 1.2 1 0 0 1 1 1 0 Clathrin light chain CdvA PF18822.1 AID30476.1 - 0.026 14.3 2.6 0.049 13.5 1.1 1.8 1 1 1 2 2 2 0 CdvA-like coiled-coil domain Phasin_2 PF09361.10 AID30476.1 - 0.03 14.6 2.8 0.036 14.3 2.8 1.1 1 0 0 1 1 1 0 Phasin protein YtxH PF12732.7 AID30476.1 - 0.035 14.6 2.0 0.035 14.6 2.0 3.0 2 1 1 3 3 3 0 YtxH-like protein EcsC PF12787.7 AID30476.1 - 0.061 13.0 0.4 0.072 12.7 0.4 1.1 1 0 0 1 1 1 0 EcsC protein family SKA1 PF07160.12 AID30476.1 - 0.061 13.2 0.6 0.072 12.9 0.6 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 FAM167 PF11652.8 AID30476.1 - 0.063 13.8 0.3 0.088 13.3 0.3 1.3 1 0 0 1 1 1 0 FAM167 Ntox28 PF15605.6 AID30476.1 - 0.079 13.2 0.2 0.12 12.6 0.2 1.4 1 1 0 1 1 1 0 Bacterial toxin 28 FlaC_arch PF05377.11 AID30476.1 - 0.08 13.4 0.9 0.16 12.3 0.4 1.8 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) ALC PF17527.2 AID30476.1 - 0.092 12.4 0.7 0.12 12.1 0.7 1.2 1 0 0 1 1 1 0 Phage ALC protein MAD PF05557.13 AID30476.1 - 0.098 11.0 3.4 0.11 10.8 3.4 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein Val_tRNA-synt_C PF10458.9 AID30476.1 - 0.1 12.9 0.3 0.1 12.9 0.3 1.6 2 0 0 2 2 1 0 Valyl tRNA synthetase tRNA binding arm FH2 PF02181.23 AID30476.1 - 0.14 11.3 1.4 0.18 10.9 1.4 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain AD PF09793.9 AID30476.1 - 0.2 11.8 2.3 0.24 11.5 0.3 1.9 1 1 1 2 2 2 0 Anticodon-binding domain TMPIT PF07851.13 AID30476.1 - 0.21 10.8 0.1 0.23 10.7 0.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein ATP-synt_B PF00430.18 AID30476.1 - 0.33 11.1 10.3 1.7 8.7 9.8 1.9 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) FadA PF09403.10 AID30476.1 - 0.42 11.1 0.3 0.42 11.1 0.3 2.1 2 0 0 2 2 2 0 Adhesion protein FadA Rotamase PF00639.21 AID30476.1 - 2.2 9.3 6.0 12 6.9 1.1 2.1 1 1 1 2 2 2 0 PPIC-type PPIASE domain Homoserine_dh PF00742.19 AID30477.1 - 3.2e-64 216.0 2.0 7.5e-64 214.8 0.3 2.1 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 AID30477.1 - 3.3e-13 50.3 1.5 7.1e-13 49.2 1.0 1.9 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ACT PF01842.25 AID30477.1 - 3.1e-07 30.1 0.5 1e-06 28.4 0.5 2.0 1 0 0 1 1 1 1 ACT domain GFO_IDH_MocA PF01408.22 AID30477.1 - 0.041 14.7 0.1 0.11 13.3 0.1 1.8 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold HasA PF06438.12 AID30477.1 - 0.054 13.1 0.0 0.19 11.3 0.0 1.9 1 1 0 2 2 2 0 Heme-binding protein A (HasA) Glucodextran_B PF09136.10 AID30477.1 - 1 9.8 6.1 5.9 7.3 0.1 3.9 4 0 0 4 4 4 0 Glucodextranase, domain B Aminotran_1_2 PF00155.21 AID30478.1 - 1.4e-51 175.8 0.0 1.5e-51 175.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PhaC_N PF07167.13 AID30480.1 - 6.5e-79 263.6 0.0 9.8e-79 263.0 0.0 1.3 1 0 0 1 1 1 1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Abhydrolase_1 PF00561.20 AID30480.1 - 5.1e-09 36.1 0.0 1.1e-08 35.1 0.0 1.6 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF3141 PF11339.8 AID30480.1 - 0.028 12.9 0.0 0.088 11.2 0.0 1.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3141) Peptidase_M15_3 PF08291.11 AID30482.1 - 6.4e-25 87.4 0.0 1.3e-24 86.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase M15 Peptidase_M15_2 PF05951.13 AID30482.1 - 2e-11 43.8 0.0 3.2e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF882) DnaJ PF00226.31 AID30484.1 - 3.9e-18 65.3 0.4 5.7e-18 64.8 0.4 1.3 1 0 0 1 1 1 1 DnaJ domain DUF3143 PF11341.8 AID30484.1 - 0.15 12.4 0.1 2.1 8.8 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3143) TadE PF07811.12 AID30485.1 - 5e-07 29.9 1.8 1.4e-06 28.4 1.8 1.9 1 1 0 1 1 1 1 TadE-like protein TadE PF07811.12 AID30486.1 - 6.6e-08 32.7 0.4 2.1e-07 31.1 0.4 1.9 1 0 0 1 1 1 1 TadE-like protein Tad PF13400.6 AID30487.1 - 2.3e-11 43.8 2.2 7.7e-11 42.1 2.2 1.9 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like TadE PF07811.12 AID30487.1 - 0.051 13.9 2.2 0.19 12.0 2.2 2.0 1 0 0 1 1 1 0 TadE-like protein Epiglycanin_C PF14654.6 AID30487.1 - 0.078 13.0 0.0 8.3 6.5 0.0 2.4 2 0 0 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region Beta_helix PF13229.6 AID30487.1 - 0.079 12.8 2.6 1.3 8.9 0.1 2.3 2 0 0 2 2 2 0 Right handed beta helix region DUF982 PF06169.12 AID30488.1 - 3.3e-21 75.1 0.1 3.9e-21 74.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF982) Shikimate_dh_N PF08501.11 AID30491.1 - 0.066 13.5 0.0 0.09 13.0 0.0 1.3 1 1 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain Peptidase_M24 PF00557.24 AID30492.1 - 1.2e-50 172.2 0.1 1.3e-50 172.0 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 RadC PF04002.15 AID30493.1 - 4.3e-45 152.6 0.0 6.8e-45 152.0 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 AID30493.1 - 7e-05 22.6 0.0 0.00011 21.9 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HHH_2 PF12826.7 AID30493.1 - 0.00011 22.2 0.0 0.00023 21.2 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 AID30493.1 - 0.0034 18.0 0.1 0.0072 16.9 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain VIR_N PF15912.5 AID30494.1 - 0.1 12.2 0.9 0.15 11.6 0.9 1.2 1 0 0 1 1 1 0 Virilizer, N-terminal Seryl_tRNA_N PF02403.22 AID30494.1 - 0.38 11.0 5.3 0.81 9.9 0.7 2.3 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4404 PF14357.6 AID30494.1 - 0.44 11.2 6.9 0.71 10.5 1.5 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4404) IER PF05760.12 AID30494.1 - 0.79 10.0 8.0 1.1 9.5 8.0 1.2 1 0 0 1 1 1 0 Immediate early response protein (IER) DUF4407 PF14362.6 AID30494.1 - 0.98 8.7 15.3 0.94 8.8 14.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SGL PF08450.12 AID30495.1 - 3.6e-83 278.9 0.3 4.1e-83 278.7 0.3 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF5122 PF17164.4 AID30495.1 - 0.0014 18.8 4.9 0.01 16.1 0.4 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF5122) beta-propeller Ldl_recept_b PF00058.17 AID30495.1 - 0.11 13.1 0.1 0.27 11.8 0.1 1.7 1 0 0 1 1 1 0 Low-density lipoprotein receptor repeat class B BKACE PF05853.12 AID30496.1 - 4.2e-103 344.4 0.0 4.8e-103 344.2 0.0 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme 3HCDH_N PF02737.18 AID30497.1 - 1.5e-45 155.3 0.0 2.1e-45 154.8 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 AID30497.1 - 1.5e-15 57.5 0.1 3.6e-15 56.3 0.1 1.6 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 AID30497.1 - 5.7e-05 23.1 0.2 0.00011 22.2 0.2 1.4 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 AID30497.1 - 0.0003 20.4 0.3 0.00053 19.6 0.3 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 AID30497.1 - 0.00073 19.7 0.1 0.0032 17.7 0.1 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Epimerase PF01370.21 AID30497.1 - 0.00078 19.0 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family UDPG_MGDP_dh_N PF03721.14 AID30497.1 - 0.0019 17.8 0.1 0.0046 16.6 0.0 1.5 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.27 AID30497.1 - 0.0081 16.7 0.0 0.017 15.7 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID30497.1 - 0.015 14.9 0.3 0.02 14.5 0.3 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID30497.1 - 0.015 15.5 0.4 0.044 14.0 0.5 1.8 2 0 0 2 2 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID30497.1 - 0.06 12.6 0.1 0.082 12.1 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 AID30497.1 - 0.096 13.3 0.1 0.19 12.3 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 AID30497.1 - 0.1 12.0 0.4 0.35 10.2 0.2 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 AID30497.1 - 0.22 10.6 1.4 0.29 10.2 1.4 1.2 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.25 AID30498.1 - 1.8e-32 112.4 0.0 2.3e-32 112.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID30498.1 - 2.7e-30 105.6 0.0 3.9e-30 105.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID30498.1 - 2.4e-07 30.9 0.3 5.9e-07 29.6 0.3 1.6 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID30498.1 - 0.0055 16.6 0.1 0.0078 16.1 0.1 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID30498.1 - 0.0099 16.1 0.1 0.015 15.6 0.1 1.2 1 0 0 1 1 1 1 TrkA-N domain ThiF PF00899.21 AID30498.1 - 0.016 14.6 0.4 0.032 13.6 0.4 1.4 1 0 0 1 1 1 0 ThiF family Sacchrp_dh_NADP PF03435.18 AID30498.1 - 0.019 15.2 0.3 0.029 14.6 0.3 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 AID30498.1 - 0.031 13.6 0.0 0.055 12.8 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 AID30498.1 - 0.049 14.2 0.3 0.073 13.6 0.3 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DFP PF04127.15 AID30498.1 - 0.065 13.1 0.6 0.15 11.8 0.6 1.6 1 1 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein XdhC_C PF13478.6 AID30498.1 - 0.068 13.7 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 XdhC Rossmann domain Epimerase PF01370.21 AID30498.1 - 0.094 12.2 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 AID30498.1 - 0.11 12.5 0.3 0.2 11.7 0.3 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FoP_duplication PF13865.6 AID30498.1 - 1.6 9.3 4.5 3 8.5 4.5 1.5 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 BPD_transp_2 PF02653.16 AID30499.1 - 9e-69 231.6 102.1 5.8e-38 130.6 42.2 2.6 3 0 0 3 3 3 2 Branched-chain amino acid transport system / permease component TMEM132D_C PF15706.5 AID30499.1 - 7.4 6.4 5.6 46 3.9 0.5 3.1 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term ABC_tran PF00005.27 AID30500.1 - 1.9e-42 145.0 0.0 1e-26 94.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID30500.1 - 4.4e-06 26.7 0.0 0.01 15.7 0.0 2.7 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID30500.1 - 0.00079 19.1 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30500.1 - 0.035 14.0 0.1 0.075 12.9 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 AID30500.1 - 0.066 13.6 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 AID30500.1 - 0.2 11.2 0.3 0.83 9.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID30500.1 - 0.24 11.9 0.1 0.38 11.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain Peripla_BP_4 PF13407.6 AID30501.1 - 2e-49 168.5 7.8 2.7e-49 168.1 7.8 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Phasin_2 PF09361.10 AID30501.1 - 0.065 13.5 2.0 0.13 12.5 2.0 1.6 1 0 0 1 1 1 0 Phasin protein SfsA PF03749.13 AID30501.1 - 0.083 12.8 0.1 1.2 9.1 0.1 2.2 1 1 0 1 1 1 0 Sugar fermentation stimulation protein RE domain FCD PF07729.12 AID30502.1 - 1.9e-26 92.9 7.2 1.9e-26 92.9 7.2 1.5 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID30502.1 - 1.3e-18 66.4 0.6 5.3e-18 64.4 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID30502.1 - 0.0065 16.0 0.4 0.023 14.2 0.0 2.1 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 AID30502.1 - 0.015 15.0 0.0 0.035 13.9 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID30502.1 - 0.016 15.2 0.1 0.11 12.5 0.0 2.3 2 0 0 2 2 2 0 HTH domain HTH_AsnC-type PF13404.6 AID30502.1 - 0.023 14.5 0.2 0.19 11.6 0.0 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 AID30502.1 - 0.043 13.6 0.0 0.15 11.9 0.0 1.9 2 0 0 2 2 2 0 HTH DNA binding domain Rrf2 PF02082.20 AID30502.1 - 0.051 13.9 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_15 PF12324.8 AID30502.1 - 0.12 12.4 0.8 0.77 9.8 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase COX2 PF00116.20 AID30503.1 - 8.7e-17 61.1 0.1 2.3e-16 59.7 0.1 1.7 1 1 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 AID30503.1 - 0.0051 16.9 0.0 0.0094 16.0 0.0 1.4 1 0 0 1 1 1 1 Cupredoxin-like domain Sulf_transp PF04143.14 AID30503.1 - 0.025 14.1 4.5 0.035 13.7 4.5 1.2 1 0 0 1 1 1 0 Sulphur transport COX2_TM PF02790.15 AID30503.1 - 0.04 14.1 0.3 0.04 14.1 0.3 2.0 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain ERG4_ERG24 PF01222.17 AID30503.1 - 0.04 12.7 0.3 0.057 12.2 0.3 1.1 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family DUF4131 PF13567.6 AID30503.1 - 0.58 9.8 6.7 1.2 8.8 0.5 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) DUF2970 PF11174.8 AID30503.1 - 1.9 8.4 0.0 1.9 8.4 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2970) DUF3339 PF11820.8 AID30503.1 - 2.2 8.5 6.9 20 5.4 2.3 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3339) UPF0182 PF03699.13 AID30503.1 - 6.1 4.8 5.5 7.5 4.5 5.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) COX1 PF00115.20 AID30504.1 - 5e-132 440.8 77.9 5e-132 440.8 77.9 1.5 1 1 1 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Asparaginase_II PF06089.12 AID30505.1 - 0.091 11.8 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 L-asparaginase II OppC_N PF12911.7 AID30505.1 - 9.9 6.2 9.5 4.1 7.5 0.1 3.0 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C COX3 PF00510.18 AID30506.1 - 3.4e-19 69.7 15.3 5.8e-19 68.9 15.3 1.4 1 1 0 1 1 1 1 Cytochrome c oxidase subunit III COX4_pro PF03626.14 AID30507.1 - 2.8e-12 46.9 15.3 4e-12 46.4 15.3 1.2 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV tRNA_edit PF04073.15 AID30508.1 - 2.8e-20 72.6 0.0 3.2e-20 72.5 0.0 1.0 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain DUF2189 PF09955.9 AID30509.1 - 1.5e-40 138.4 6.8 1.5e-40 138.4 6.8 3.0 2 1 1 3 3 3 2 Predicted integral membrane protein (DUF2189) HOK_GEF PF01848.16 AID30509.1 - 0.1 12.0 0.5 0.1 12.0 0.5 2.4 3 0 0 3 3 3 0 Hok/gef family UbiA PF01040.18 AID30511.1 - 1.7e-59 201.2 33.5 1.7e-59 201.2 33.5 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family Cytochrom_C PF00034.21 AID30512.1 - 2.2e-09 38.3 0.1 3.9e-09 37.5 0.1 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AID30512.1 - 0.00062 20.0 1.5 0.0035 17.6 1.5 1.9 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III VasI PF11319.8 AID30513.1 - 0.015 14.9 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system VasI, EvfG, VC_A0118 Trigger_C PF05698.14 AID30514.1 - 4.3e-42 143.9 3.1 4.3e-42 143.9 3.1 2.8 4 0 0 4 4 4 1 Bacterial trigger factor protein (TF) C-terminus Trigger_N PF05697.13 AID30514.1 - 6.7e-35 120.5 2.0 6.7e-35 120.5 2.0 2.8 3 0 0 3 3 3 1 Bacterial trigger factor protein (TF) FKBP_C PF00254.28 AID30514.1 - 9e-16 58.0 1.0 4.3e-15 55.8 0.3 2.4 3 0 0 3 3 3 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4695 PF15766.5 AID30514.1 - 0.0059 16.8 0.1 0.021 15.0 0.1 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4695) DUF2937 PF11157.8 AID30515.1 - 0.034 13.8 0.1 0.066 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) GDYXXLXY PF14345.6 AID30516.1 - 1.5e-31 109.3 0.0 1.7e-31 109.1 0.0 1.0 1 0 0 1 1 1 1 GDYXXLXY protein DUF2157 PF09925.9 AID30517.1 - 2.3e-35 121.5 13.1 2.3e-35 121.5 13.1 3.9 1 1 2 3 3 3 1 Predicted membrane protein (DUF2157) DUF5389 PF17364.2 AID30517.1 - 2 8.5 7.4 0.7 10.0 1.6 2.9 3 1 0 3 3 3 0 Family of unknown function (DUF5389) DUF1127 PF06568.11 AID30518.1 - 2.7e-17 62.2 2.0 3e-17 62.0 2.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) DUF1127 PF06568.11 AID30519.1 - 2.9e-15 55.7 0.5 3.8e-15 55.3 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) GIDA PF01134.22 AID30521.1 - 8.3e-108 361.0 0.0 1e-107 360.7 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AID30521.1 - 2.6e-05 23.5 0.8 5.2e-05 22.5 0.8 1.5 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AID30521.1 - 7.2e-05 22.9 0.4 0.0002 21.5 0.4 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID30521.1 - 7.7e-05 22.2 0.6 0.00011 21.8 0.6 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 AID30521.1 - 0.00039 20.1 1.5 0.00068 19.3 1.5 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 AID30521.1 - 0.00063 19.1 0.1 0.0011 18.3 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 AID30521.1 - 0.00094 18.5 0.1 0.0014 18.0 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 AID30521.1 - 0.069 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 AID30521.1 - 0.097 11.3 0.2 0.19 10.4 0.2 1.4 1 0 0 1 1 1 0 HI0933-like protein DUF1851 PF08906.11 AID30523.1 - 3.6e-07 30.0 0.0 4.7e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1851) FA_hydroxylase PF04116.13 AID30524.1 - 1e-26 93.8 18.8 1e-26 93.8 18.8 1.6 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily DUF4203 PF13886.6 AID30524.1 - 2.1 7.9 13.3 3.1 7.4 12.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4203) SQS_PSY PF00494.19 AID30526.1 - 1e-44 153.0 4.5 1.2e-44 152.8 4.5 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase DUF498 PF04430.14 AID30527.1 - 2e-30 105.1 0.0 2.3e-30 104.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) SecD_SecF PF02355.16 AID30528.1 - 2.8e-86 287.7 27.6 1.3e-69 233.4 8.0 2.3 2 0 0 2 2 2 2 Protein export membrane protein Sec_GG PF07549.14 AID30528.1 - 7e-14 50.8 0.1 9.8e-06 24.9 0.0 3.0 2 0 0 2 2 2 2 SecD/SecF GG Motif MMPL PF03176.15 AID30528.1 - 1.1e-09 37.8 15.3 1.1e-09 37.8 15.3 2.7 2 1 0 2 2 2 1 MMPL family Sterol-sensing PF12349.8 AID30528.1 - 1.2e-07 31.7 15.2 0.00027 20.8 3.6 2.6 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation SecD-TM1 PF13721.6 AID30528.1 - 0.00038 20.9 2.4 0.61 10.6 0.5 3.3 3 0 0 3 3 3 2 SecD export protein N-terminal TM region Patched PF02460.18 AID30528.1 - 0.32 9.0 26.1 0.85 7.6 11.5 2.2 2 0 0 2 2 2 0 Patched family YajC PF02699.15 AID30529.1 - 4e-25 87.5 0.3 4.9e-25 87.2 0.3 1.1 1 0 0 1 1 1 1 Preprotein translocase subunit Orf78 PF06024.12 AID30529.1 - 0.0089 16.3 0.4 0.013 15.8 0.4 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF815 PF05673.13 AID30530.1 - 1.5e-103 345.4 0.0 1.9e-103 345.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 AID30530.1 - 3.9e-06 27.4 0.3 7.4e-05 23.2 0.0 2.8 3 1 1 4 4 4 1 AAA ATPase domain AAA PF00004.29 AID30530.1 - 8.9e-05 22.9 0.0 0.00042 20.8 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 AID30530.1 - 0.021 14.7 0.0 0.044 13.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_29 PF13555.6 AID30530.1 - 0.058 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30530.1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase Sigma54_activat PF00158.26 AID30530.1 - 0.089 12.5 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_35 PF14516.6 AID30530.1 - 0.14 11.0 0.0 0.2 10.5 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain Epimerase PF01370.21 AID30531.1 - 3.9e-11 42.9 0.0 6.4e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID30531.1 - 2e-09 37.6 0.1 4.4e-09 36.5 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 AID30531.1 - 0.0011 19.3 0.1 0.0067 16.7 0.0 2.1 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 AID30531.1 - 0.0013 19.0 0.0 0.0027 17.9 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain GDP_Man_Dehyd PF16363.5 AID30531.1 - 0.0042 16.5 0.0 0.46 9.8 0.0 2.5 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID30531.1 - 0.0042 16.2 0.0 0.12 11.4 0.0 2.3 2 0 0 2 2 2 1 RmlD substrate binding domain FAD_binding_3 PF01494.19 AID30531.1 - 0.016 14.5 0.1 0.026 13.8 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain NAD_binding_7 PF13241.6 AID30531.1 - 0.023 15.1 0.0 0.052 14.0 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 AID30531.1 - 0.031 13.7 0.0 0.053 12.9 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID30531.1 - 0.043 13.9 0.0 0.09 12.8 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase GAF_2 PF13185.6 AID30531.1 - 0.051 13.9 0.0 0.13 12.5 0.0 1.8 1 0 0 1 1 1 0 GAF domain Pyr_redox_2 PF07992.14 AID30531.1 - 0.093 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase KR PF08659.10 AID30531.1 - 0.13 12.2 0.0 0.3 11.0 0.0 1.6 1 0 0 1 1 1 0 KR domain 3HCDH_N PF02737.18 AID30531.1 - 0.13 12.1 0.1 0.43 10.4 0.0 1.8 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short PF00106.25 AID30531.1 - 0.14 11.6 0.0 0.29 10.6 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase PCMT PF01135.19 AID30532.1 - 1.8e-32 112.8 0.0 2.3e-32 112.5 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AID30532.1 - 9.5e-11 41.7 0.0 1.3e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID30532.1 - 6.1e-10 39.7 0.0 3.5e-09 37.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30532.1 - 2.6e-07 30.6 0.0 3.8e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID30532.1 - 5.5e-07 30.1 0.0 9.3e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID30532.1 - 9.1e-05 21.9 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 AID30532.1 - 0.00057 19.6 0.0 0.00081 19.1 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_12 PF08242.12 AID30532.1 - 0.0013 19.5 0.0 0.0023 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 AID30532.1 - 0.0071 16.3 0.1 0.01 15.9 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID30532.1 - 0.0084 15.7 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 AID30532.1 - 0.017 14.6 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase SIS_2 PF13580.6 AID30532.1 - 0.03 14.3 0.3 0.059 13.4 0.2 1.4 1 1 0 1 1 1 0 SIS domain Methyltransf_3 PF01596.17 AID30532.1 - 0.04 13.1 0.1 0.056 12.6 0.1 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltr_RsmB-F PF01189.17 AID30532.1 - 0.049 13.3 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F RrnaAD PF00398.20 AID30532.1 - 0.059 12.4 0.0 0.081 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 AID30532.1 - 0.079 12.9 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 AID30532.1 - 0.079 12.3 0.0 0.097 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF938 PF06080.12 AID30532.1 - 0.14 11.9 0.1 0.35 10.6 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF938) Peptidase_M23 PF01551.22 AID30533.1 - 1.4e-30 105.3 0.3 4.2e-30 103.8 0.3 1.9 1 0 0 1 1 1 1 Peptidase family M23 LysM PF01476.20 AID30533.1 - 9.6e-24 83.2 0.2 2.3e-12 46.8 0.0 2.5 2 0 0 2 2 2 2 LysM domain PCMT PF01135.19 AID30534.1 - 3.4e-43 147.9 0.0 4.2e-43 147.6 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AID30534.1 - 9.6e-11 41.7 0.0 1.2e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID30534.1 - 1.8e-09 38.1 0.0 3.3e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30534.1 - 2.7e-07 30.6 0.0 3.8e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID30534.1 - 6e-07 30.0 0.0 8.6e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID30534.1 - 0.00012 21.5 0.0 0.00016 21.1 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 AID30534.1 - 0.00069 20.3 0.0 0.0012 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 AID30534.1 - 0.0007 19.4 0.0 0.00098 18.9 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.6 AID30534.1 - 0.0084 16.1 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID30534.1 - 0.0098 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 AID30534.1 - 0.018 14.5 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase SIS_2 PF13580.6 AID30534.1 - 0.03 14.3 0.3 0.064 13.3 0.3 1.6 1 1 0 1 1 1 0 SIS domain Methyltr_RsmB-F PF01189.17 AID30534.1 - 0.038 13.6 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_3 PF01596.17 AID30534.1 - 0.043 13.0 0.0 0.059 12.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase RrnaAD PF00398.20 AID30534.1 - 0.064 12.3 0.0 0.093 11.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase PrmA PF06325.13 AID30534.1 - 0.07 12.5 0.1 0.081 12.3 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 AID30534.1 - 0.077 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF938 PF06080.12 AID30534.1 - 0.18 11.6 0.1 0.38 10.5 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF938) SurE PF01975.17 AID30535.1 - 1.4e-55 188.2 0.0 1.7e-55 187.9 0.0 1.0 1 0 0 1 1 1 1 Survival protein SurE tRNA-synt_2b PF00587.25 AID30536.1 - 8.7e-36 123.5 0.0 1.5e-35 122.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 AID30536.1 - 8.8e-31 106.3 3.0 1.4e-30 105.7 3.0 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF3584 PF12128.8 AID30536.1 - 0.3 8.5 3.0 0.42 8.1 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TatC PF00902.18 AID30537.1 - 3.9e-67 226.1 20.6 4.5e-67 225.9 20.6 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) DUF1673 PF07895.11 AID30537.1 - 5.4 6.7 9.8 5.1 6.7 7.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) MttA_Hcf106 PF02416.16 AID30538.1 - 8.9e-07 28.1 0.5 3.7e-06 26.2 0.5 2.0 1 1 0 1 1 1 1 mttA/Hcf106 family SLC3A2_N PF16028.5 AID30538.1 - 0.09 12.3 0.1 0.19 11.3 0.1 1.6 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus MttA_Hcf106 PF02416.16 AID30539.1 - 7.4e-13 47.6 0.0 8e-13 47.5 0.0 1.2 1 0 0 1 1 1 1 mttA/Hcf106 family SMC_ScpB PF04079.16 AID30540.1 - 5.2e-49 165.9 0.0 6.5e-49 165.6 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB SMC_ScpA PF02616.14 AID30541.1 - 1.3e-14 54.7 1.4 5.3e-14 52.7 1.4 1.8 1 1 0 1 1 1 1 Segregation and condensation protein ScpA GGDEF_2 PF17853.1 AID30541.1 - 0.059 13.6 0.9 0.29 11.4 0.9 2.1 1 1 0 1 1 1 0 GGDEF-like domain Glyco_hydro_3 PF00933.21 AID30542.1 - 6.4e-46 157.2 0.0 8.3e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain SPOR PF05036.13 AID30543.1 - 2.2e-10 40.8 0.5 3.6e-10 40.1 0.5 1.4 1 0 0 1 1 1 1 Sporulation related domain DALR_1 PF05746.15 AID30545.1 - 2.4e-32 111.6 0.0 4.7e-32 110.7 0.0 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 AID30545.1 - 4.9e-21 75.1 0.0 1.4e-20 73.6 0.0 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1d PF00750.19 AID30545.1 - 2.3e-16 59.7 0.3 2.1e-10 40.1 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (R) tRNA-synt_1e PF01406.19 AID30545.1 - 1.7e-06 27.7 0.0 0.04 13.3 0.0 2.3 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 AID30545.1 - 4e-06 25.4 0.0 0.00021 19.7 0.0 2.7 3 0 0 3 3 3 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 AID30545.1 - 0.00018 20.4 0.0 1.1 7.9 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 AID30545.1 - 0.042 12.8 0.0 0.72 8.7 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (K) HD_assoc PF13286.6 AID30546.1 - 3.6e-29 101.2 0.4 8.4e-29 100.0 0.4 1.7 1 0 0 1 1 1 1 Phosphohydrolase-associated domain HD PF01966.22 AID30546.1 - 3.8e-15 56.2 0.5 1.4e-14 54.4 0.1 2.0 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 AID30546.1 - 2.5e-05 23.9 0.0 0.00028 20.4 0.0 2.1 2 0 0 2 2 2 1 HDOD domain hemP PF10636.9 AID30546.1 - 0.011 15.6 0.5 0.023 14.5 0.5 1.5 1 0 0 1 1 1 0 Hemin uptake protein hemP Fe-S_biosyn PF01521.20 AID30547.1 - 1.2e-21 77.0 0.0 1.3e-21 76.8 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Glucodextran_B PF09136.10 AID30547.1 - 0.016 15.6 0.9 0.025 14.9 0.9 1.3 1 0 0 1 1 1 0 Glucodextranase, domain B Glyoxalase PF00903.25 AID30548.1 - 8.9e-06 25.9 0.0 0.0098 16.1 0.0 2.1 1 1 1 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID30548.1 - 0.0014 19.4 0.0 0.0077 17.0 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID30548.1 - 0.039 14.2 0.0 0.1 12.9 0.0 1.6 1 1 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Exo_endo_phos PF03372.23 AID30549.1 - 1.1e-22 80.8 0.3 1.2e-22 80.5 0.3 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Sel1 PF08238.12 AID30551.1 - 9.7e-15 54.7 8.6 4.1e-08 33.6 0.1 3.9 4 0 0 4 4 4 3 Sel1 repeat TPR_16 PF13432.6 AID30551.1 - 0.027 15.1 6.7 4.7 7.9 0.7 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 AID30551.1 - 0.84 9.9 10.9 0.54 10.5 1.6 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat ILVD_EDD PF00920.21 AID30552.1 - 4.2e-205 682.2 3.4 4.8e-205 682.1 3.4 1.0 1 0 0 1 1 1 1 Dehydratase family Toluene_X PF03349.16 AID30553.1 - 4.8e-16 58.3 0.7 1.1e-14 53.8 0.0 2.0 1 1 0 2 2 2 2 Outer membrane protein transport protein (OMPP1/FadL/TodX) OMP_b-brl PF13505.6 AID30553.1 - 6.7e-06 26.3 7.4 0.026 14.7 0.2 2.3 2 0 0 2 2 2 2 Outer membrane protein beta-barrel domain Toluene_X PF03349.16 AID30555.1 - 5.8e-08 31.7 0.5 1.7e-07 30.2 0.2 1.8 1 1 1 2 2 2 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) tRNA-synt_1 PF00133.22 AID30557.1 - 3.9e-213 709.1 0.1 6.6e-212 705.0 0.3 2.2 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 AID30557.1 - 1e-38 132.7 0.3 5.2e-38 130.4 0.0 2.1 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 AID30557.1 - 4.5e-21 75.0 3.6 8.1e-08 31.4 0.0 3.5 2 2 0 3 3 3 3 tRNA synthetases class I (M) Val_tRNA-synt_C PF10458.9 AID30557.1 - 1.2e-20 73.5 5.1 2.6e-20 72.5 5.1 1.6 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 AID30557.1 - 8.5e-09 35.2 0.1 1.9e-06 27.5 0.0 2.4 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 AID30557.1 - 6.3e-05 22.5 0.0 0.0065 15.9 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 AID30557.1 - 0.00027 20.0 0.0 0.00049 19.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1c PF00749.21 AID30557.1 - 0.18 10.6 0.2 10 4.9 0.1 2.6 3 0 0 3 3 3 0 tRNA synthetases class I (E and Q), catalytic domain ABC_tran_CTD PF16326.5 AID30557.1 - 0.31 11.3 2.7 1.1 9.5 2.7 2.0 2 0 0 2 2 2 0 ABC transporter C-terminal domain Glyoxalase PF00903.25 AID30559.1 - 6.7e-08 32.8 0.0 9.2e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID30559.1 - 0.00043 20.2 0.0 0.001 19.0 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain DUF2497 PF10691.9 AID30560.1 - 2.5e-25 88.7 0.7 5.9e-25 87.5 0.2 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2497) RsdA_SigD_bd PF16751.5 AID30560.1 - 0.072 13.3 2.8 0.91 9.8 0.3 2.6 2 0 0 2 2 2 0 Anti-sigma-D factor RsdA to sigma factor binding region OEP PF02321.18 AID30561.1 - 1.8e-61 207.3 28.1 1.3e-31 109.8 8.6 2.0 2 0 0 2 2 2 2 Outer membrane efflux protein Siva PF05458.12 AID30561.1 - 0.13 12.0 0.2 0.29 10.8 0.2 1.6 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF2229 PF09989.9 AID30561.1 - 0.8 9.3 3.0 0.58 9.8 0.1 2.3 3 0 0 3 3 3 0 CoA enzyme activase uncharacterised domain (DUF2229) PCMT PF01135.19 AID30562.1 - 8.3e-34 117.2 0.0 1e-33 116.9 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 AID30562.1 - 1.6e-08 35.1 0.0 3.2e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 AID30562.1 - 3.5e-08 32.8 0.0 5.1e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 AID30562.1 - 9.6e-07 29.4 0.0 1.8e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID30562.1 - 1.6e-05 24.7 0.0 2.3e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID30562.1 - 0.00076 20.2 0.0 0.0012 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30562.1 - 0.001 19.0 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 AID30562.1 - 0.0012 18.5 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 AID30562.1 - 0.0015 18.1 0.3 0.0044 16.6 0.1 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_32 PF13679.6 AID30562.1 - 0.0037 17.3 0.1 0.0072 16.3 0.1 1.5 1 1 1 2 2 2 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 AID30562.1 - 0.043 13.4 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 AID30562.1 - 0.1 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 AID30562.1 - 0.23 10.8 0.2 0.29 10.5 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PGPGW PF09656.10 AID30564.1 - 2.3e-05 23.8 5.4 4.4e-05 22.9 5.4 1.5 1 1 0 1 1 1 1 Putative transmembrane protein (PGPGW) VirB3 PF05101.13 AID30564.1 - 0.0032 17.7 0.3 0.0045 17.2 0.3 1.2 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein ATP-synt_Z PF16594.5 AID30564.1 - 0.16 11.5 2.6 0.29 10.7 0.7 2.1 2 0 0 2 2 2 0 Putative AtpZ or ATP-synthase-associated DUF2892 PF11127.8 AID30564.1 - 0.21 11.6 2.3 0.3 11.1 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) Phage_integrase PF00589.22 AID30565.1 - 4.2e-13 49.4 0.0 1.2e-12 48.0 0.0 1.7 2 0 0 2 2 2 1 Phage integrase family DUF1989 PF09347.10 AID30565.1 - 0.063 12.9 0.0 0.29 10.7 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1989) KTSC PF13619.6 AID30567.1 - 6.8e-08 32.2 0.0 8.3e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 KTSC domain Resolvase PF00239.21 AID30568.1 - 8.1e-25 87.6 0.3 1.3e-24 86.9 0.3 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain Recombinase PF07508.13 AID30568.1 - 0.00024 21.5 0.0 0.00042 20.7 0.0 1.4 1 0 0 1 1 1 1 Recombinase DDE_Tnp_1 PF01609.21 AID30571.1 - 1.6e-31 109.7 0.3 2.1e-31 109.2 0.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF4096 PF13340.6 AID30571.1 - 4.7e-16 58.8 0.3 1.1e-15 57.6 0.3 1.7 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1_2 PF13586.6 AID30571.1 - 1e-15 57.8 0.5 1.9e-15 57.0 0.5 1.5 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 AID30571.1 - 0.0014 18.7 0.0 0.0025 17.9 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain Harakiri PF15196.6 AID30571.1 - 0.13 12.7 1.3 0.15 12.6 0.0 1.8 2 0 0 2 2 2 0 Activator of apoptosis harakiri DUF1542 PF07564.11 AID30572.1 - 4.2 7.5 7.2 1.1 9.4 1.9 2.5 2 1 1 3 3 3 0 Domain of Unknown Function (DUF1542) AAA_5 PF07728.14 AID30574.1 - 4.1e-18 65.7 0.0 6e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 AID30574.1 - 1.9e-05 25.1 0.0 3.6e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID30574.1 - 0.00035 20.8 0.0 0.00093 19.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID30574.1 - 0.00053 20.4 0.2 0.0038 17.6 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 AID30574.1 - 0.00055 19.7 0.0 0.0014 18.4 0.0 1.6 1 1 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 AID30574.1 - 0.0014 19.2 0.0 0.0024 18.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 AID30574.1 - 0.0031 17.3 0.1 0.029 14.1 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 AID30574.1 - 0.0036 17.7 0.0 0.18 12.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID30574.1 - 0.0051 16.5 0.1 0.049 13.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID30574.1 - 0.0075 16.5 0.1 0.014 15.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_3 PF07726.11 AID30574.1 - 0.0088 15.9 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID30574.1 - 0.012 15.8 0.0 0.027 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID30574.1 - 0.013 14.9 0.1 0.021 14.2 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 AID30574.1 - 0.014 15.2 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID30574.1 - 0.033 13.7 0.1 0.095 12.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 AID30574.1 - 0.049 13.2 0.0 0.14 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID30574.1 - 0.061 13.7 0.0 0.6 10.5 0.0 2.4 3 0 0 3 3 3 0 RNA helicase PhoH PF02562.16 AID30574.1 - 0.061 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein MCM PF00493.23 AID30574.1 - 0.087 11.9 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 MCM P-loop domain rve PF00665.26 AID30577.1 - 3.3e-17 62.8 0.1 7.1e-17 61.7 0.1 1.6 1 0 0 1 1 1 1 Integrase core domain AAA_34 PF13872.6 AID30578.1 - 6.3e-51 173.1 0.0 7.4e-51 172.8 0.0 1.0 1 0 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 DUF3606 PF12244.8 AID30579.1 - 0.0028 17.6 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3606) Cupin_2 PF07883.11 AID30583.1 - 1.5e-15 56.7 0.0 1.9e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 AID30583.1 - 0.00013 21.6 0.1 0.00015 21.4 0.1 1.1 1 0 0 1 1 1 1 Cupin Cupin_7 PF12973.7 AID30583.1 - 0.074 13.0 0.0 0.11 12.4 0.0 1.4 1 1 0 1 1 1 0 ChrR Cupin-like domain CMD PF02627.20 AID30584.1 - 1.1e-17 63.8 2.2 1.1e-17 63.8 2.2 1.9 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family CutC PF03932.14 AID30585.1 - 1.9e-86 288.7 0.5 2.3e-86 288.4 0.5 1.1 1 0 0 1 1 1 1 CutC family Acetyltransf_1 PF00583.25 AID30586.1 - 1e-07 32.2 0.1 1.4e-07 31.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID30586.1 - 4.2e-07 30.0 0.0 6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID30586.1 - 0.00063 19.8 0.0 0.0014 18.7 0.0 1.6 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.7 AID30586.1 - 0.0034 17.8 0.0 0.0076 16.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID30586.1 - 0.0063 16.6 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Flavodoxin_2 PF02525.17 AID30586.1 - 0.0093 15.7 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold FR47 PF08445.10 AID30586.1 - 0.018 15.0 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Polyketide_cyc PF03364.20 AID30587.1 - 2.6e-09 37.4 0.3 3.5e-09 36.9 0.3 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 AID30587.1 - 2.4e-08 34.4 1.8 2.8e-08 34.1 1.8 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 AID30587.1 - 0.0009 19.5 0.1 0.0014 18.9 0.1 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Acyl_transf_3 PF01757.22 AID30588.1 - 3.8e-16 59.1 33.6 5.3e-16 58.6 33.6 1.2 1 0 0 1 1 1 1 Acyltransferase family FAD_binding_5 PF00941.21 AID30589.1 - 3.3e-44 150.6 0.1 5.5e-44 149.9 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID30589.1 - 0.0036 17.5 0.7 0.0036 17.5 0.7 2.5 3 1 0 3 3 3 1 CO dehydrogenase flavoprotein C-terminal domain FAD_binding_4 PF01565.23 AID30589.1 - 0.0044 16.8 1.0 0.016 14.9 0.2 2.2 2 1 0 2 2 2 1 FAD binding domain Ald_Xan_dh_C2 PF02738.18 AID30590.1 - 1.1e-176 588.6 3.6 1.3e-176 588.3 3.6 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID30590.1 - 3.7e-31 107.7 0.2 9e-31 106.5 0.2 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HTH_8 PF02954.19 AID30590.1 - 0.16 11.8 0.1 0.44 10.4 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Glyco_hydro_66 PF13199.6 AID30590.1 - 0.18 10.4 0.3 0.25 10.0 0.3 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 66 Fer2_2 PF01799.20 AID30591.1 - 5.9e-31 106.3 3.6 1.1e-30 105.4 0.3 2.1 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID30591.1 - 1.5e-06 28.0 0.7 1.5e-06 28.0 0.7 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID30591.1 - 0.002 18.1 0.7 0.0046 17.0 0.7 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 AID30591.1 - 0.017 15.2 4.5 0.052 13.6 2.1 2.7 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain FIST PF08495.10 AID30592.1 - 2.1e-30 106.0 1.1 4.9e-30 104.8 0.6 1.8 2 1 0 2 2 2 1 FIST N domain FIST_C PF10442.9 AID30592.1 - 2.3e-14 53.5 0.2 1.2e-12 47.9 0.1 2.4 2 0 0 2 2 2 1 FIST C domain DUF1949 PF09186.11 AID30592.1 - 0.065 13.1 0.5 12 5.9 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1949) HATPase_c PF02518.26 AID30593.1 - 6.2e-18 65.3 0.0 1.4e-17 64.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID30593.1 - 1.6e-11 44.3 0.2 6.4e-11 42.4 0.1 2.1 3 0 0 3 3 3 1 Response regulator receiver domain HisKA PF00512.25 AID30593.1 - 4e-11 42.8 1.0 4e-11 42.8 1.0 2.7 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain Response_reg PF00072.24 AID30594.1 - 1.1e-23 83.5 0.0 2.2e-23 82.5 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 AID30594.1 - 1.2e-18 66.4 0.4 2.1e-18 65.6 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID30594.1 - 2.6e-05 23.8 0.7 5.2e-05 22.8 0.7 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_7 PF02796.15 AID30594.1 - 0.00046 20.2 0.1 0.0012 18.8 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_ECF PF07638.11 AID30594.1 - 0.00069 19.6 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 ECF sigma factor HTH_40 PF14493.6 AID30594.1 - 0.0021 18.5 0.2 0.0058 17.1 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID30594.1 - 0.011 15.2 0.9 0.034 13.7 0.9 1.8 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_Tnp_4 PF13613.6 AID30594.1 - 0.016 14.9 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_23 PF13384.6 AID30594.1 - 0.023 14.5 0.1 0.15 11.9 0.1 2.3 1 1 1 2 2 2 0 Homeodomain-like domain DUF2089 PF09862.9 AID30594.1 - 0.03 14.4 0.1 0.052 13.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) FAA_hydrolase PF01557.18 AID30595.1 - 4.1e-50 170.4 0.0 4.9e-50 170.2 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family GST_N_3 PF13417.6 AID30596.1 - 8.8e-19 67.7 0.1 1.5e-18 66.9 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID30596.1 - 2.8e-15 56.4 0.0 5.6e-15 55.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID30596.1 - 1.1e-14 54.5 0.0 1.7e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID30596.1 - 0.00055 20.1 0.0 0.00089 19.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID30596.1 - 0.0044 17.0 0.0 0.0088 16.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain MFS_1 PF07690.16 AID30597.1 - 9.4e-36 123.4 62.1 1.7e-30 106.2 46.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30597.1 - 1.2e-12 47.4 13.1 1.2e-12 47.4 13.1 2.6 2 1 1 3 3 3 1 Sugar (and other) transporter MFS_4 PF06779.14 AID30597.1 - 0.00015 21.2 40.6 0.00038 19.9 40.6 1.6 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB OATP PF03137.20 AID30597.1 - 0.64 8.2 5.7 0.22 9.8 0.2 2.5 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family HxlR PF01638.17 AID30598.1 - 5.2e-20 71.1 0.0 8e-20 70.5 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 AID30598.1 - 0.045 13.8 0.0 0.076 13.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Replic_Relax PF13814.6 AID30598.1 - 0.059 13.4 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation MarR_2 PF12802.7 AID30598.1 - 0.069 13.1 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 MarR family ADH_N PF08240.12 AID30599.1 - 2.4e-28 98.2 1.4 4.4e-28 97.3 1.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID30599.1 - 2.1e-27 95.7 0.3 3.5e-27 95.0 0.3 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 AID30599.1 - 1.8e-07 30.7 1.5 5.7e-07 29.1 0.7 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 AID30599.1 - 0.00051 21.1 0.0 0.00089 20.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID30599.1 - 0.0043 16.6 0.1 0.0066 15.9 0.1 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 AID30599.1 - 0.0082 15.5 0.1 0.014 14.7 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 AID30599.1 - 0.071 12.8 0.3 0.11 12.1 0.3 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UDPG_MGDP_dh_N PF03721.14 AID30599.1 - 0.076 12.6 0.3 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 AID30599.1 - 0.086 13.1 0.1 0.17 12.1 0.1 1.6 2 0 0 2 2 2 0 TrkA-N domain Methyltransf_25 PF13649.6 AID30599.1 - 0.14 12.9 0.1 0.3 11.8 0.1 1.7 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 AID30599.1 - 0.21 10.8 0.0 0.41 9.9 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase EamA PF00892.20 AID30600.1 - 3.6e-23 82.2 31.9 1.1e-11 45.0 8.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family B12D PF06522.11 AID30600.1 - 0.86 9.4 3.0 0.62 9.9 0.2 2.3 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Aminotran_1_2 PF00155.21 AID30601.1 - 2.5e-22 79.6 0.0 3.6e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID30601.1 - 8.4e-15 54.2 0.1 8.4e-15 54.2 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Aminotran_MocR PF12897.7 AID30601.1 - 0.0001 21.2 0.1 0.00042 19.2 0.1 1.9 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Rrf2 PF02082.20 AID30601.1 - 0.0029 17.9 0.0 0.0089 16.4 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator MarR_2 PF12802.7 AID30601.1 - 0.003 17.4 0.5 0.011 15.7 0.5 2.0 1 0 0 1 1 1 1 MarR family Beta_elim_lyase PF01212.21 AID30601.1 - 0.0031 16.8 0.0 0.004 16.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 AID30601.1 - 0.0095 14.5 0.0 0.014 14.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme HTH_41 PF14502.6 AID30601.1 - 0.042 13.6 0.0 0.077 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 AID30601.1 - 0.077 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 AID30601.1 - 0.11 12.6 0.0 0.4 10.7 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn helix HTH_36 PF13730.6 AID30601.1 - 0.12 12.3 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Aminotran_1_2 PF00155.21 AID30602.1 - 1.6e-06 27.6 0.0 1.8e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II LysR_substrate PF03466.20 AID30603.1 - 1.2e-24 86.9 2.1 1.2e-24 86.9 2.1 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID30603.1 - 5.3e-15 55.1 2.7 1.2e-14 53.9 2.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID30603.1 - 0.00035 20.4 0.9 0.00099 18.9 0.9 1.8 1 0 0 1 1 1 1 MarR family HTH_29 PF13551.6 AID30603.1 - 0.0038 17.2 1.2 0.0076 16.3 0.4 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_30 PF13556.6 AID30603.1 - 0.0041 16.9 0.2 0.009 15.8 0.2 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_8 PF02954.19 AID30603.1 - 0.077 12.8 0.7 0.2 11.5 0.7 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family MFS_1 PF07690.16 AID30604.1 - 2.1e-46 158.5 41.0 2.5e-46 158.3 41.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 AID30604.1 - 8e-15 54.2 21.6 8e-15 54.2 21.6 2.1 1 1 0 2 2 2 1 Transmembrane secretion effector MFS_1_like PF12832.7 AID30604.1 - 5e-08 32.2 17.0 0.00016 20.7 12.9 2.6 2 1 0 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 AID30604.1 - 7.9e-08 31.6 26.5 4.3e-07 29.1 23.9 2.8 1 1 1 2 2 2 1 Sugar (and other) transporter OATP PF03137.20 AID30604.1 - 0.00012 20.6 1.8 0.00012 20.6 1.8 2.1 1 1 1 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family RhodobacterPufX PF11511.8 AID30604.1 - 0.9 9.2 11.3 0.12 12.0 1.2 3.3 3 0 0 3 3 3 0 Intrinsic membrane protein PufX MFS_1 PF07690.16 AID30605.1 - 0.00013 21.1 8.2 0.00013 21.1 8.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1 PF07690.16 AID30606.1 - 0.00049 19.1 9.5 0.00049 19.1 9.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Herpes_UL49_5 PF05702.11 AID30606.1 - 1.9 8.7 6.9 0.15 12.2 1.3 1.9 2 0 0 2 2 2 0 Herpesvirus UL49.5 envelope/tegument protein MaoC_dehydratas PF01575.19 AID30607.1 - 3.1e-25 88.1 0.0 4.1e-25 87.7 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID30607.1 - 0.00023 21.3 0.0 0.00068 19.8 0.0 1.7 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Phasin_2 PF09361.10 AID30608.1 - 5.2e-18 65.2 2.6 6.5e-18 64.8 2.6 1.1 1 0 0 1 1 1 1 Phasin protein DUF883 PF05957.13 AID30608.1 - 0.0019 18.8 2.8 0.18 12.4 0.2 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF883) OmpH PF03938.14 AID30608.1 - 0.091 13.1 2.3 0.15 12.4 2.3 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) OEP PF02321.18 AID30608.1 - 0.62 9.8 7.9 0.12 12.1 2.2 2.0 2 0 0 2 2 2 0 Outer membrane efflux protein TPR_14 PF13428.6 AID30608.1 - 0.79 10.7 3.6 4 8.5 0.1 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF445 PF04286.12 AID30609.1 - 5.8e-98 329.1 0.0 6.6e-98 328.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF445) Rrf2 PF02082.20 AID30610.1 - 5.2e-24 84.4 0.0 7.4e-24 83.9 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 AID30610.1 - 0.011 15.6 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 MarR family GntR PF00392.21 AID30610.1 - 0.062 13.0 0.0 0.19 11.4 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family ABC_tran PF00005.27 AID30611.1 - 6e-22 78.6 0.0 8.3e-22 78.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30611.1 - 1.1e-05 25.4 0.5 1.7e-05 24.8 0.5 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID30611.1 - 2.4e-05 24.9 0.0 2.9e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID30611.1 - 3.6e-05 23.3 0.0 0.00067 19.2 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30611.1 - 0.00011 21.9 0.1 0.00019 21.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 AID30611.1 - 0.001 17.8 0.0 0.57 8.7 0.0 2.0 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 AID30611.1 - 0.0023 18.3 0.1 0.0049 17.3 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 AID30611.1 - 0.0023 17.7 0.0 0.0033 17.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 AID30611.1 - 0.0026 17.7 0.0 0.0041 17.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain NACHT PF05729.12 AID30611.1 - 0.0027 17.6 0.1 0.012 15.5 0.0 2.1 3 0 0 3 3 3 1 NACHT domain PRK PF00485.18 AID30611.1 - 0.0056 16.4 0.1 0.39 10.4 0.0 2.1 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.6 AID30611.1 - 0.0057 16.2 0.1 0.012 15.2 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 AID30611.1 - 0.0074 16.3 0.0 0.38 10.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID30611.1 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID30611.1 - 0.015 15.4 0.0 0.026 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID30611.1 - 0.019 15.3 0.0 0.034 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID30611.1 - 0.021 15.4 0.0 0.039 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID30611.1 - 0.021 15.2 0.1 0.033 14.6 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 AID30611.1 - 0.026 14.1 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID30611.1 - 0.03 14.4 0.1 0.059 13.5 0.1 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase T2SSE PF00437.20 AID30611.1 - 0.035 13.1 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ATP_bind_1 PF03029.17 AID30611.1 - 0.038 13.8 0.1 0.062 13.1 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_28 PF13521.6 AID30611.1 - 0.046 14.0 0.0 0.095 12.9 0.0 1.5 2 0 0 2 2 1 0 AAA domain MobB PF03205.14 AID30611.1 - 0.073 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Mg_chelatase PF01078.21 AID30611.1 - 0.079 12.3 0.5 0.21 11.0 0.3 1.6 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 AID30611.1 - 0.088 12.5 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 AID30611.1 - 0.096 12.1 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein ABC_ATPase PF09818.9 AID30611.1 - 0.12 11.1 0.1 0.17 10.7 0.1 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_19 PF13245.6 AID30611.1 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 AID30611.1 - 0.16 11.6 0.2 0.3 10.7 0.1 1.5 2 0 0 2 2 1 0 SRP54-type protein, GTPase domain FtsK_SpoIIIE PF01580.18 AID30611.1 - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family cobW PF02492.19 AID30611.1 - 0.18 11.4 0.1 0.3 10.7 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 AID30611.1 - 0.18 11.7 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 AID30611.1 - 0.2 11.6 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase RNA_helicase PF00910.22 AID30611.1 - 0.22 11.9 0.0 0.35 11.3 0.0 1.3 1 0 0 1 1 1 0 RNA helicase FecCD PF01032.18 AID30612.1 - 4.9e-90 301.7 42.3 6.2e-90 301.4 42.3 1.1 1 0 0 1 1 1 1 FecCD transport family DUF898 PF05987.13 AID30612.1 - 5.5 5.9 19.1 0.21 10.6 10.7 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF898) Peripla_BP_2 PF01497.18 AID30613.1 - 1.8e-28 99.7 0.0 2.3e-28 99.4 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein HemS PF05171.12 AID30614.1 - 1.1e-91 303.5 0.0 1.4e-45 154.4 0.0 2.1 2 0 0 2 2 2 2 Haemin-degrading HemS.ChuX domain ChuX_HutX PF06228.13 AID30614.1 - 7.3e-68 226.5 0.1 7e-35 119.7 0.0 2.1 2 0 0 2 2 2 2 Haem utilisation ChuX/HutX hemP PF10636.9 AID30615.1 - 1.2e-16 60.2 1.2 1.2e-16 60.2 1.2 1.4 2 0 0 2 2 2 1 Hemin uptake protein hemP TonB_dep_Rec PF00593.24 AID30616.1 - 6.9e-52 177.9 29.8 6.9e-52 177.9 29.8 2.0 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 AID30616.1 - 6.2e-22 78.2 2.2 1.4e-21 77.0 1.5 2.1 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain OMP_b-brl_3 PF14905.6 AID30616.1 - 0.00012 21.2 4.4 0.14 11.2 0.0 3.1 3 1 0 3 3 3 2 Outer membrane protein beta-barrel family TonB_2 PF13103.6 AID30618.1 - 1.2e-10 41.5 0.0 3.1e-10 40.2 0.0 1.7 1 0 0 1 1 1 1 TonB C terminal TonB_C PF03544.14 AID30618.1 - 3e-08 34.0 0.0 1e-07 32.3 0.0 1.9 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal MBOAT_2 PF13813.6 AID30618.1 - 0.06 13.6 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Membrane bound O-acyl transferase family ABM PF03992.16 AID30619.1 - 1.6e-21 76.2 0.4 2.1e-21 75.8 0.4 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Aldedh PF00171.22 AID30620.1 - 7.5e-115 384.1 1.2 7.5e-115 384.1 1.2 2.1 2 0 0 2 2 2 1 Aldehyde dehydrogenase family Pro_dh PF01619.18 AID30620.1 - 2.9e-97 325.8 0.1 4.1e-97 325.3 0.1 1.2 1 0 0 1 1 1 1 Proline dehydrogenase Pro_dh-DNA_bdg PF14850.6 AID30620.1 - 4e-44 149.7 0.0 9.5e-44 148.5 0.0 1.7 1 0 0 1 1 1 1 DNA-binding domain of Proline dehydrogenase PRODH PF18327.1 AID30620.1 - 4.9e-11 42.7 3.2 4.9e-11 42.7 3.2 3.4 3 0 0 3 3 3 1 Proline utilization A proline dehydrogenase N-terminal domain AsnC_trans_reg PF01037.21 AID30621.1 - 2.4e-21 75.5 0.1 3.4e-21 75.0 0.1 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID30621.1 - 7.2e-20 70.3 0.1 1.1e-19 69.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID30621.1 - 3.9e-17 61.8 0.2 7.8e-17 60.8 0.2 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 AID30621.1 - 5.9e-09 35.7 0.1 1.4e-08 34.5 0.0 1.7 2 0 0 2 2 2 1 MarR family MarR PF01047.22 AID30621.1 - 1.2e-05 25.2 0.0 1.9e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID30621.1 - 3.9e-05 23.3 0.0 0.00013 21.7 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 AID30621.1 - 4.4e-05 23.5 0.0 8.4e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID30621.1 - 0.0004 20.2 0.0 0.0011 18.8 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 AID30621.1 - 0.00058 19.8 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 AID30621.1 - 0.00089 18.9 0.0 0.0015 18.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family APP_E2 PF12925.7 AID30621.1 - 0.0009 19.0 0.0 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 E2 domain of amyloid precursor protein TrmB PF01978.19 AID30621.1 - 0.001 18.9 0.0 0.0018 18.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 AID30621.1 - 0.0034 17.1 0.0 0.0065 16.2 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_34 PF13601.6 AID30621.1 - 0.0039 17.3 0.0 0.0069 16.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 AID30621.1 - 0.0051 17.0 0.0 0.0096 16.1 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 AID30621.1 - 0.0059 16.6 0.1 0.013 15.5 0.0 1.6 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 AID30621.1 - 0.0076 16.2 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 AID30621.1 - 0.013 15.6 0.1 0.024 14.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID30621.1 - 0.024 15.0 0.0 0.044 14.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_41 PF14502.6 AID30621.1 - 0.03 14.0 0.0 0.065 12.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 AID30621.1 - 0.1 13.1 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DDRGK PF09756.9 AID30621.1 - 0.14 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain DUF501 PF04417.12 AID30621.1 - 0.14 12.0 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF501) RPA_C PF08784.11 AID30621.1 - 0.14 12.8 0.0 0.26 11.9 0.0 1.5 1 0 0 1 1 1 0 Replication protein A C terminal CCP_MauG PF03150.14 AID30622.1 - 2.7e-36 125.5 0.0 2.8e-33 115.7 0.0 2.2 2 0 0 2 2 2 2 Di-haem cytochrome c peroxidase Cytochrom_C PF00034.21 AID30622.1 - 6.6e-09 36.8 0.0 2.1e-05 25.6 0.0 3.2 2 2 0 2 2 2 2 Cytochrome c Cytochrome_CBB3 PF13442.6 AID30622.1 - 0.0001 22.6 1.5 5.4 7.4 0.0 4.1 3 1 0 4 4 4 2 Cytochrome C oxidase, cbb3-type, subunit III DUF1924 PF09086.11 AID30622.1 - 0.015 15.6 0.0 0.86 10.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1924) Cytochrome_C7 PF14522.6 AID30622.1 - 0.027 14.4 0.0 8.2 6.5 0.0 2.3 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 AID30622.1 - 0.082 12.7 0.3 18 5.2 0.1 2.3 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) DUF1289 PF06945.13 AID30622.1 - 0.17 11.7 0.2 0.54 10.1 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) YtkA PF13115.6 AID30623.1 - 8.7e-15 55.1 0.0 1.6e-14 54.3 0.0 1.4 1 1 1 2 2 2 1 YtkA-like DUF2275 PF10039.9 AID30623.1 - 0.039 14.1 0.1 0.045 13.8 0.1 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) PfkB PF00294.24 AID30624.1 - 7.8e-51 173.2 0.1 9.4e-51 172.9 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase FAD-oxidase_C PF02913.19 AID30624.1 - 0.079 12.6 0.1 0.17 11.5 0.1 1.5 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain Aldose_epim PF01263.20 AID30625.1 - 3e-76 256.6 0.0 3.6e-76 256.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Aldedh PF00171.22 AID30626.1 - 1.3e-170 567.9 0.4 1.5e-170 567.7 0.4 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Cep57_CLD_2 PF14197.6 AID30626.1 - 0.11 12.7 0.2 0.21 11.7 0.2 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Mem_trans PF03547.18 AID30627.1 - 1.4e-54 185.0 21.1 5.8e-29 100.7 13.9 2.0 1 1 1 2 2 2 2 Membrane transport protein Peptidase_C14 PF00656.22 AID30628.1 - 4.4e-28 98.9 0.0 6.8e-28 98.3 0.0 1.3 1 0 0 1 1 1 1 Caspase domain TPR_10 PF13374.6 AID30628.1 - 8.1e-16 57.3 54.5 0.0006 19.6 0.9 12.6 13 1 0 13 13 13 7 Tetratricopeptide repeat TPR_12 PF13424.6 AID30628.1 - 4.8e-05 23.6 37.9 0.38 11.1 1.6 9.9 5 2 7 12 12 12 6 Tetratricopeptide repeat TPR_17 PF13431.6 AID30628.1 - 6e-05 23.1 11.7 0.93 10.0 0.0 6.9 8 0 0 8 8 8 2 Tetratricopeptide repeat LssY_C PF14067.6 AID30628.1 - 0.0051 16.4 0.3 3.2 7.3 0.0 2.6 2 0 0 2 2 2 2 LssY C-terminus Wzy_C_2 PF11846.8 AID30628.1 - 0.029 14.3 7.1 0.55 10.1 0.4 3.7 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal KinB_sensor PF16767.5 AID30628.1 - 0.62 10.5 5.0 1e+02 3.4 0.0 5.0 5 1 1 6 6 6 0 Sensor domain of alginate biosynthesis sensor protein KinB DUF2564 PF10819.8 AID30628.1 - 1.9 8.9 4.6 14 6.2 0.3 4.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2564) His_Phos_1 PF00300.22 AID30629.1 - 8.1e-08 32.2 0.1 2.1e-06 27.6 0.0 2.1 1 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) Band_7 PF01145.25 AID30630.1 - 9.4e-27 94.2 5.0 1.2e-24 87.3 6.3 2.3 2 1 0 2 2 2 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 AID30630.1 - 0.00017 21.4 0.1 0.11 12.2 0.2 2.5 2 0 0 2 2 2 2 SPFH domain-Band 7 family PP-binding PF00550.25 AID30631.1 - 2.5e-10 40.6 0.3 3.5e-10 40.1 0.3 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site ketoacyl-synt PF00109.26 AID30632.1 - 1.3e-18 67.5 2.1 1.5e-17 64.0 2.1 2.2 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ketoacyl-synt PF00109.26 AID30633.1 - 8.4e-34 117.3 2.3 7.4e-33 114.2 0.5 2.6 2 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID30633.1 - 3e-33 114.3 0.3 6.5e-33 113.2 0.0 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 AID30633.1 - 0.00077 18.9 0.6 0.0094 15.3 0.3 2.5 2 1 1 3 3 3 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 AID30633.1 - 0.0014 18.5 1.2 0.012 15.5 0.3 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ADH_zinc_N PF00107.26 AID30634.1 - 3.4e-37 127.3 1.5 5.7e-37 126.6 1.5 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID30634.1 - 7.4e-25 87.0 0.0 3e-24 85.0 0.0 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 AID30634.1 - 2.9e-23 83.4 0.1 5e-23 82.6 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase PALP PF00291.25 AID30634.1 - 0.011 15.2 0.2 0.033 13.6 0.1 1.8 2 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme NADH_4Fe-4S PF10589.9 AID30634.1 - 0.025 14.6 0.8 0.053 13.6 0.3 1.8 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Limkain-b1 PF11608.8 AID30634.1 - 0.13 12.3 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 Limkain b1 CMAS PF02353.20 AID30634.1 - 0.17 11.1 0.1 0.24 10.6 0.1 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase adh_short PF00106.25 AID30634.1 - 0.26 10.7 1.8 0.63 9.5 1.8 1.8 1 1 0 1 1 1 0 short chain dehydrogenase Lip_A_acyltrans PF03279.13 AID30635.1 - 8.8e-43 146.6 0.0 1.2e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Methyltransf_25 PF13649.6 AID30636.1 - 6.5e-05 23.6 0.0 0.00015 22.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 AID30636.1 - 0.00017 21.1 0.0 0.00024 20.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_31 PF13847.6 AID30636.1 - 0.00077 19.3 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID30636.1 - 0.0014 19.2 0.0 0.0057 17.3 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30636.1 - 0.0075 16.1 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 AID30636.1 - 0.02 14.5 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 AID30636.1 - 0.022 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 AID30636.1 - 0.13 12.3 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Pyr_redox_3 PF13738.6 AID30637.1 - 1.7e-19 70.2 0.0 2.5e-16 59.8 0.0 2.2 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 AID30637.1 - 2.1e-12 46.9 0.1 1.4e-09 37.5 0.0 3.0 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 AID30637.1 - 1.5e-08 34.2 0.0 3.7e-07 29.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID30637.1 - 3.4e-05 24.3 2.8 0.011 16.2 0.0 3.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 AID30637.1 - 9.6e-05 21.0 0.0 0.00015 20.3 0.0 1.2 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like NAD_binding_9 PF13454.6 AID30637.1 - 0.0081 16.2 2.4 0.25 11.3 0.1 3.4 4 0 0 4 4 4 1 FAD-NAD(P)-binding GIDA PF01134.22 AID30637.1 - 0.034 13.2 4.7 0.2 10.7 0.1 2.8 3 0 0 3 3 3 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 AID30637.1 - 0.061 13.8 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 AID30637.1 - 0.1 11.6 1.9 0.55 9.2 0.1 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_binding_3 PF01494.19 AID30637.1 - 0.59 9.3 2.9 1.7 7.8 1.6 2.0 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.6 AID30637.1 - 0.63 10.3 9.3 0.66 10.2 0.9 3.1 3 1 0 3 3 3 0 NAD(P)-binding Rossmann-like domain ATPgrasp_Ter PF15632.6 AID30638.1 - 5.7e-07 29.3 0.0 9.1e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 AID30638.1 - 0.0004 20.5 0.0 0.00077 19.5 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AID30638.1 - 0.14 11.7 0.0 5.2 6.5 0.0 2.3 1 1 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain FixS PF03597.15 AID30638.1 - 1.6 8.5 4.4 0.51 10.1 0.3 2.2 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type YkuD PF03734.14 AID30639.1 - 4.8e-18 66.0 0.4 6.3e-18 65.6 0.4 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Microvir_J PF04726.13 AID30639.1 - 0.22 11.5 1.5 0.41 10.6 1.5 1.4 1 0 0 1 1 1 0 Microvirus J protein Peptidase_M20 PF01546.28 AID30640.1 - 4.7e-39 134.2 0.2 6.1e-39 133.9 0.2 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID30640.1 - 3.2e-25 88.2 0.0 7e-25 87.1 0.0 1.6 2 0 0 2 2 2 1 Peptidase dimerisation domain SBP_bac_5 PF00496.22 AID30642.1 - 1.2e-87 294.3 2.1 1.7e-87 293.8 2.1 1.2 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 AID30643.1 - 5e-39 134.0 17.0 5e-39 134.0 17.0 2.0 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID30644.1 - 2.9e-28 98.9 13.6 2.9e-28 98.9 13.6 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID30644.1 - 0.00036 20.4 0.2 0.00036 20.4 0.2 3.5 3 1 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 AID30645.1 - 3.2e-62 209.0 0.0 2.7e-32 112.1 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID30645.1 - 4.9e-11 43.0 0.3 0.009 15.8 0.1 4.0 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID30645.1 - 1.4e-09 38.4 0.6 0.0023 18.2 0.0 3.4 2 2 0 2 2 2 2 AAA domain oligo_HPY PF08352.12 AID30645.1 - 3.3e-08 33.9 0.2 0.00057 20.4 0.1 2.7 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 AID30645.1 - 1.6e-07 31.9 3.3 0.00046 20.6 0.2 3.0 2 2 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 AID30645.1 - 1.7e-06 27.7 0.1 0.076 12.4 0.0 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 AID30645.1 - 2.5e-06 27.0 0.8 0.0053 16.2 0.1 2.8 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 AID30645.1 - 4.4e-06 26.3 0.2 0.029 14.1 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30645.1 - 1.4e-05 25.1 0.1 0.0039 17.1 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase NB-ARC PF00931.22 AID30645.1 - 0.00011 21.6 0.3 0.022 13.9 0.0 2.5 3 0 0 3 3 3 1 NB-ARC domain AAA_33 PF13671.6 AID30645.1 - 0.00011 22.4 0.0 0.053 13.7 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 AID30645.1 - 0.00019 21.0 0.1 0.52 9.8 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_5 PF07728.14 AID30645.1 - 0.00023 21.2 1.5 0.31 11.0 0.0 3.2 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AID30645.1 - 0.0008 19.1 0.0 0.44 10.2 0.0 2.9 2 0 0 2 2 2 1 Sigma-54 interaction domain NACHT PF05729.12 AID30645.1 - 0.00096 19.1 3.4 0.31 10.9 0.0 3.3 3 1 1 4 4 4 2 NACHT domain AAA_25 PF13481.6 AID30645.1 - 0.001 18.7 0.3 0.91 9.1 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 AID30645.1 - 0.002 17.9 0.1 1.6 8.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 AID30645.1 - 0.0026 17.2 0.8 3.5 7.0 0.1 3.6 4 0 0 4 4 4 1 Bacterial TniB protein AAA PF00004.29 AID30645.1 - 0.0035 17.8 0.0 0.9 10.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 AID30645.1 - 0.0055 17.1 0.0 0.72 10.3 0.0 2.7 2 0 0 2 2 2 1 RNA helicase DUF87 PF01935.17 AID30645.1 - 0.007 16.5 1.0 0.92 9.6 0.1 2.5 2 0 0 2 2 2 1 Helicase HerA, central domain MMR_HSR1 PF01926.23 AID30645.1 - 0.0086 16.1 0.0 0.11 12.6 0.0 2.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase PRK PF00485.18 AID30645.1 - 0.0093 15.7 0.0 2.1 8.0 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AIG1 PF04548.16 AID30645.1 - 0.027 13.8 0.0 1.6 8.0 0.0 2.4 2 0 0 2 2 2 0 AIG1 family APS_kinase PF01583.20 AID30645.1 - 0.033 14.1 0.1 11 5.9 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase MobB PF03205.14 AID30645.1 - 0.033 14.1 0.4 27 4.7 0.0 3.3 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase PF06745.13 AID30645.1 - 0.034 13.5 0.6 12 5.1 0.0 3.2 3 0 0 3 3 3 0 KaiC ATP-synt_ab PF00006.25 AID30645.1 - 0.036 13.7 0.0 0.21 11.2 0.0 2.1 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 AID30645.1 - 0.04 13.2 0.7 1 8.6 0.0 2.8 3 0 0 3 3 2 0 Zeta toxin AAA_15 PF13175.6 AID30645.1 - 0.067 12.9 0.0 0.91 9.2 0.0 2.4 3 0 0 3 3 3 0 AAA ATPase domain AAA_13 PF13166.6 AID30645.1 - 0.077 11.6 0.0 0.98 8.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 AID30645.1 - 0.079 12.7 0.2 3.5 7.3 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_28 PF13521.6 AID30645.1 - 0.11 12.8 0.6 4.5 7.5 0.1 3.1 2 1 0 2 2 2 0 AAA domain Hpr_kinase_C PF07475.12 AID30645.1 - 0.13 11.8 0.4 30 4.1 0.1 3.3 4 0 0 4 4 3 0 HPr Serine kinase C-terminal domain TsaE PF02367.17 AID30645.1 - 0.15 12.0 0.1 3.3 7.7 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 AID30645.1 - 0.26 11.2 0.1 2.6 7.9 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain CbiA PF01656.23 AID30645.1 - 0.26 11.4 0.6 11 6.1 0.1 2.8 3 0 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain NUDIX PF00293.28 AID30646.1 - 7.8e-21 74.5 0.0 9.6e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 AID30646.1 - 0.00012 22.0 0.0 0.00016 21.6 0.0 1.5 1 1 0 1 1 1 1 NUDIX domain TerB PF05099.13 AID30647.1 - 4.8e-24 85.0 0.7 5.7e-24 84.7 0.7 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TerB DUF4398 PF14346.6 AID30647.1 - 0.053 14.2 1.9 0.077 13.6 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4398) DUF2543 PF10820.8 AID30647.1 - 0.069 13.3 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) LETM1 PF07766.13 AID30647.1 - 0.092 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 LETM1-like protein TauE PF01925.19 AID30648.1 - 4.1e-44 151.0 35.9 4.9e-44 150.7 35.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2101 PF09874.9 AID30649.1 - 0.042 13.5 3.5 0.042 13.6 3.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Claudin_2 PF13903.6 AID30649.1 - 0.99 9.1 8.6 1.1 9.0 8.6 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction FA_desaturase PF00487.24 AID30649.1 - 4.3 7.1 6.5 4.4 7.1 6.5 1.0 1 0 0 1 1 1 0 Fatty acid desaturase HTH_18 PF12833.7 AID30650.1 - 4.9e-16 58.8 0.0 9.7e-16 57.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30650.1 - 1.5e-08 34.5 0.0 0.00014 21.9 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 AID30650.1 - 0.039 13.7 0.7 0.4 10.5 0.1 2.5 2 1 1 3 3 3 0 Homeodomain-like domain HTH_AsnC-type PF13404.6 AID30650.1 - 0.074 12.9 0.9 3.3 7.6 0.1 3.4 3 1 1 4 4 4 0 AsnC-type helix-turn-helix domain Glyoxalase PF00903.25 AID30651.1 - 1.8e-09 37.9 0.0 2.5e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID30651.1 - 6.2e-07 30.2 0.0 1.1e-06 29.4 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID30651.1 - 0.0085 16.4 0.0 0.011 16.0 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GATase_3 PF07685.14 AID30652.1 - 3.6e-57 193.2 0.0 4.9e-57 192.7 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 AID30652.1 - 1.8e-19 70.3 0.0 2.2e-18 66.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain CbiA PF01656.23 AID30652.1 - 2.1e-18 66.6 0.0 3.3e-18 66.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 AID30652.1 - 0.035 14.0 0.0 0.34 10.8 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DMSP_lyase PF16867.5 AID30653.1 - 1.6e-56 190.5 0.2 1.8e-56 190.3 0.2 1.0 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase Cupin_2 PF07883.11 AID30653.1 - 0.0018 17.9 1.3 0.003 17.3 1.3 1.4 1 0 0 1 1 1 1 Cupin domain Acyl-CoA_dh_1 PF00441.24 AID30654.1 - 1.7e-45 154.9 1.9 3e-45 154.1 1.9 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 AID30654.1 - 4.7e-30 104.5 0.0 1.1e-29 103.4 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 AID30654.1 - 1.5e-26 92.4 0.0 3.1e-26 91.4 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 AID30654.1 - 4.8e-20 72.2 3.0 1.1e-19 71.0 0.2 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 AID30654.1 - 0.057 14.0 0.0 0.12 12.9 0.0 1.6 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal HpaB_N PF11794.8 AID30654.1 - 0.065 12.9 0.0 0.18 11.4 0.0 1.7 1 1 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal NAD_binding_2 PF03446.15 AID30655.1 - 3.9e-50 170.1 3.6 5.2e-50 169.7 3.6 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 AID30655.1 - 1.5e-42 144.7 0.3 3.9e-42 143.3 0.0 1.8 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 AID30655.1 - 3e-10 40.5 0.2 5.8e-10 39.6 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.17 AID30655.1 - 2.3e-06 26.8 0.5 3.1e-06 26.4 0.5 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase IlvN PF07991.12 AID30655.1 - 2.6e-06 27.1 0.3 5.3e-06 26.1 0.3 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_N PF03721.14 AID30655.1 - 2.6e-05 23.9 0.1 0.031 13.8 0.0 2.3 1 1 1 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 AID30655.1 - 0.00083 19.3 0.3 0.0022 17.9 0.2 1.7 1 1 1 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID30655.1 - 0.0017 17.8 0.1 0.0025 17.2 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.19 AID30655.1 - 0.013 16.1 0.7 5.1 7.8 0.5 2.5 2 0 0 2 2 2 0 CoA binding domain TrkA_N PF02254.18 AID30655.1 - 0.057 13.7 0.1 0.15 12.3 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain ApbA PF02558.16 AID30655.1 - 0.11 12.2 0.2 0.28 10.8 0.2 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Coa1 PF08695.10 AID30656.1 - 8.8e-14 51.3 0.0 1.4e-13 50.6 0.0 1.3 1 0 0 1 1 1 1 Cytochrome oxidase complex assembly protein 1 DUF4402 PF14352.6 AID30656.1 - 0.034 14.8 0.0 0.054 14.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4402) Aminotran_3 PF00202.21 AID30658.1 - 8.6e-96 321.1 0.0 1.1e-95 320.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Peptidase_S9 PF00326.21 AID30660.1 - 9.1e-53 178.9 0.0 1.5e-52 178.1 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 AID30660.1 - 1.5e-35 122.8 0.0 4.5e-35 121.2 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Abhydrolase_4 PF08386.10 AID30660.1 - 0.062 13.4 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein MFS_1 PF07690.16 AID30661.1 - 3.1e-32 111.9 79.4 2.7e-25 89.0 46.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30661.1 - 4.5e-06 25.8 23.8 1.5e-05 24.0 14.5 3.0 1 1 2 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID30661.1 - 2.3e-05 23.5 5.9 2.3e-05 23.5 5.9 2.3 2 0 0 2 2 2 1 MFS_1 like family MFS_4 PF06779.14 AID30661.1 - 0.00015 21.2 38.4 0.00024 20.5 38.4 1.3 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB VanZ PF04892.12 AID30661.1 - 0.15 12.7 7.6 0.16 12.6 0.3 3.5 2 2 1 3 3 3 0 VanZ like family MFS_1 PF07690.16 AID30662.1 - 7e-28 97.6 94.6 1.3e-20 73.6 54.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID30662.1 - 1.7e-05 24.3 38.8 0.00013 21.4 38.6 2.3 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 AID30662.1 - 0.0019 17.1 10.5 0.0019 17.1 10.5 2.1 2 0 0 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 AID30662.1 - 0.03 13.2 24.9 0.28 10.0 13.0 2.3 2 0 0 2 2 2 0 Sugar (and other) transporter Methyltrn_RNA_4 PF09936.9 AID30662.1 - 0.26 11.1 0.2 0.87 9.4 0.0 1.8 2 0 0 2 2 2 0 SAM-dependent RNA methyltransferase AgrB PF04647.15 AID30662.1 - 7.9 5.7 8.8 0.14 11.5 0.7 2.1 2 0 0 2 2 2 0 Accessory gene regulator B MTTB PF06253.11 AID30663.1 - 1e-216 719.8 0.0 1.2e-216 719.6 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) GCV_T PF01571.21 AID30664.1 - 3.6e-62 210.1 0.0 5.7e-62 209.4 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID30664.1 - 8.9e-58 196.5 0.1 1.3e-57 196.1 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAO_M PF16350.5 AID30664.1 - 1.2e-15 57.6 0.2 2.3e-15 56.7 0.2 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain GCV_T_C PF08669.11 AID30664.1 - 2.6e-11 43.3 0.1 2e-10 40.5 0.1 2.4 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain NAD_binding_9 PF13454.6 AID30664.1 - 1.3e-05 25.2 1.3 0.081 12.9 0.1 2.5 2 0 0 2 2 2 2 FAD-NAD(P)-binding SoxG PF04268.12 AID30664.1 - 2.7e-05 24.3 0.0 0.00034 20.8 0.0 2.4 2 0 0 2 2 2 1 Sarcosine oxidase, gamma subunit family Pyr_redox PF00070.27 AID30664.1 - 0.00089 19.8 0.3 0.14 12.8 0.3 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID30664.1 - 0.001 18.3 0.9 0.44 9.7 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID30664.1 - 0.0042 16.4 0.0 2.2 7.4 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID30664.1 - 0.0086 16.3 0.4 0.043 14.0 0.4 2.3 1 1 1 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AID30664.1 - 0.01 14.9 0.1 0.017 14.2 0.1 1.5 1 0 0 1 1 1 0 FAD binding domain ApbA PF02558.16 AID30664.1 - 0.11 12.2 0.1 0.24 11.0 0.1 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Thi4 PF01946.17 AID30664.1 - 0.12 11.6 0.1 0.27 10.4 0.1 1.5 1 0 0 1 1 1 0 Thi4 family FAD_binding_3 PF01494.19 AID30664.1 - 0.15 11.2 0.3 14 4.8 0.2 2.1 2 0 0 2 2 2 0 FAD binding domain Shikimate_DH PF01488.20 AID30664.1 - 0.22 11.6 0.1 0.4 10.7 0.1 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Mqo PF06039.15 AID30664.1 - 0.27 9.8 0.1 1.8 7.0 0.0 2.0 2 0 0 2 2 2 0 Malate:quinone oxidoreductase (Mqo) Peptidase_M24 PF00557.24 AID30665.1 - 9.4e-24 84.3 0.0 1.5e-23 83.6 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID30665.1 - 1.7e-07 32.0 0.0 3.8e-07 30.8 0.0 1.6 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Phosphonate-bd PF12974.7 AID30666.1 - 1.2e-13 51.3 0.0 1.6e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein FA_desaturase PF00487.24 AID30667.1 - 5e-28 98.6 13.5 6.1e-28 98.3 13.5 1.1 1 0 0 1 1 1 1 Fatty acid desaturase HTH_3 PF01381.22 AID30669.1 - 3.5e-10 39.8 0.1 9.8e-10 38.3 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID30669.1 - 5.6e-08 32.7 0.0 1.3e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 AID30669.1 - 0.00054 20.3 2.9 0.005 17.2 0.4 2.9 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 AID30669.1 - 0.0021 18.4 0.1 0.0045 17.4 0.1 1.6 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain BetR PF08667.10 AID30669.1 - 0.03 14.4 0.0 0.061 13.4 0.0 1.6 2 0 0 2 2 2 0 BetR domain HTH_37 PF13744.6 AID30669.1 - 0.045 13.7 0.1 0.13 12.3 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF416 PF04222.12 AID30669.1 - 0.092 12.2 0.2 0.4 10.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF416) S-methyl_trans PF02574.16 AID30670.1 - 1.6e-54 185.5 0.0 1.9e-54 185.3 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase DUF3520 PF12034.8 AID30672.1 - 1.9e-72 243.3 0.1 2.9e-72 242.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3520) vWF_A PF12450.8 AID30672.1 - 3.9e-34 116.5 0.1 7.4e-34 115.6 0.1 1.5 1 0 0 1 1 1 1 von Willebrand factor VWA PF00092.28 AID30672.1 - 1.1e-24 87.7 0.3 2.3e-24 86.6 0.3 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 AID30672.1 - 1.5e-16 60.9 0.0 4.3e-16 59.5 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 AID30672.1 - 1.9e-12 47.4 0.0 3.6e-12 46.5 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF444 PF04285.12 AID30672.1 - 0.0082 15.3 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF444) VWA_CoxE PF05762.14 AID30672.1 - 0.034 13.5 0.0 0.065 12.6 0.0 1.5 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein Sigma70_r2 PF04542.14 AID30673.1 - 4.4e-21 74.4 0.9 9.2e-21 73.4 0.9 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID30673.1 - 3.7e-14 52.1 0.0 7e-14 51.2 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID30673.1 - 6.9e-10 38.3 0.0 1.3e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID30673.1 - 4.2e-05 23.5 0.1 0.00027 20.9 0.1 2.0 1 1 0 1 1 1 1 ECF sigma factor GerE PF00196.19 AID30673.1 - 4.5e-05 22.9 0.0 8.6e-05 22.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_16 PF12645.7 AID30673.1 - 0.00087 19.3 0.0 0.002 18.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 AID30673.1 - 0.0022 18.0 2.5 0.007 16.4 0.2 2.6 2 1 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 AID30673.1 - 0.043 13.6 1.0 0.18 11.6 0.0 2.4 2 1 0 2 2 2 0 Homeodomain-like domain HTH_1 PF00126.27 AID30673.1 - 0.13 12.2 0.3 0.35 10.8 0.2 1.8 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_10 PF04967.12 AID30673.1 - 0.14 12.0 0.4 0.41 10.5 0.1 2.0 2 1 0 2 2 2 0 HTH DNA binding domain CENP-M PF11111.8 AID30673.1 - 0.21 10.8 0.0 0.32 10.2 0.0 1.2 1 0 0 1 1 1 0 Centromere protein M (CENP-M) DLH PF01738.18 AID30674.1 - 1.4e-41 142.5 0.0 1.7e-41 142.2 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 AID30674.1 - 9e-06 25.1 0.3 0.00072 18.9 0.1 2.8 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID30674.1 - 8.5e-05 22.3 0.1 0.00018 21.2 0.1 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID30674.1 - 0.001 19.7 3.3 0.0013 19.3 3.3 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family BAAT_C PF08840.11 AID30674.1 - 0.018 15.0 0.0 0.29 11.0 0.0 2.1 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 AID30674.1 - 0.042 13.3 0.5 0.37 10.2 0.0 2.1 1 1 1 2 2 2 0 Prolyl oligopeptidase family Esterase PF00756.20 AID30674.1 - 0.065 12.9 0.2 0.16 11.6 0.4 1.7 2 1 0 2 2 2 0 Putative esterase Abhydrolase_2 PF02230.16 AID30674.1 - 0.22 11.3 0.0 0.29 10.9 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase MMACHC PF16690.5 AID30675.1 - 0.0026 17.4 0.0 0.01 15.5 0.0 1.8 1 1 0 2 2 2 1 Methylmalonic aciduria and homocystinuria type C family Fer4_3 PF12798.7 AID30675.1 - 0.33 12.0 5.8 1.5 9.9 3.2 2.9 2 1 0 2 2 2 0 4Fe-4S binding domain MTTB PF06253.11 AID30676.1 - 1.6e-225 748.8 0.0 1.9e-225 748.6 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B12-binding PF02310.19 AID30677.1 - 7.4e-25 87.3 0.8 1.1e-24 86.8 0.8 1.2 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 AID30677.1 - 2.4e-16 59.9 0.7 1.3e-15 57.5 0.1 2.2 2 0 0 2 2 2 1 B12 binding domain Entericidin PF08085.11 AID30678.1 - 0.0075 16.3 0.2 0.011 15.8 0.2 1.4 1 1 0 1 1 1 1 Entericidin EcnA/B family DUF1638 PF07796.11 AID30679.1 - 4.1e-34 118.0 0.1 4.8e-34 117.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) TbpB_A PF17484.2 AID30679.1 - 0.069 13.9 0.0 0.11 13.3 0.0 1.2 1 0 0 1 1 1 0 N-Lobe handle Tf-binding protein B UL40 PF10682.9 AID30679.1 - 0.13 12.0 0.0 0.39 10.4 0.0 1.7 2 0 0 2 2 2 0 Glycoprotein of human cytomegalovirus HHV-5 Epimerase PF01370.21 AID30680.1 - 5.8e-29 101.2 0.0 1.4e-28 100.0 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID30680.1 - 1.8e-17 63.8 0.0 2.9e-14 53.2 0.0 4.0 2 1 1 3 3 3 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID30680.1 - 4e-13 49.1 0.0 5.2e-12 45.5 0.0 2.0 2 0 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 AID30680.1 - 2.7e-12 46.5 0.1 8.3e-10 38.3 0.1 2.6 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 AID30680.1 - 2.5e-11 43.2 0.0 3.7e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID30680.1 - 4.5e-09 35.7 0.0 8.5e-09 34.8 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 AID30680.1 - 8.6e-05 22.5 0.2 0.00016 21.6 0.2 1.5 1 0 0 1 1 1 1 NAD(P)H-binding DUF4893 PF16233.5 AID30681.1 - 2.4e-59 199.7 0.0 2.7e-59 199.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4893) Formyl_trans_N PF00551.19 AID30682.1 - 2.5e-19 69.7 0.0 5.6e-19 68.6 0.0 1.5 1 1 0 1 1 1 1 Formyl transferase Virulence_fact PF13769.6 AID30683.1 - 1.3e-27 95.9 0.1 1.4e-27 95.7 0.1 1.0 1 0 0 1 1 1 1 Virulence factor MTHFR_C PF12225.8 AID30684.1 - 1.9e-28 97.9 3.9 2.7e-28 97.5 3.9 1.2 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal MTHFR PF02219.17 AID30685.1 - 2.1e-31 109.3 0.0 2.6e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase Pterin_bind PF00809.22 AID30686.1 - 4e-30 105.3 0.2 4.9e-30 105.0 0.2 1.1 1 0 0 1 1 1 1 Pterin binding enzyme CdhD PF03599.16 AID30686.1 - 2.8e-10 39.5 0.5 4.1e-10 38.9 0.5 1.2 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit Radical_SAM PF04055.21 AID30686.1 - 0.17 12.2 0.0 0.3 11.4 0.0 1.4 1 0 0 1 1 1 0 Radical SAM superfamily Transgly_assoc PF04226.13 AID30687.1 - 0.21 11.9 10.4 0.36 11.1 0.8 2.4 2 1 1 3 3 3 0 Transglycosylase associated protein RACo_C_ter PF14574.6 AID30688.1 - 1.3e-91 306.2 0.1 2e-91 305.6 0.1 1.3 1 0 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 AID30688.1 - 1.4e-48 164.7 0.0 2.1e-48 164.1 0.0 1.3 1 0 0 1 1 1 1 RACo middle region RACo_linker PF17650.1 AID30688.1 - 4.3e-26 90.6 0.0 1.6e-25 88.8 0.0 2.0 2 0 0 2 2 2 1 RACo linker region Fer2 PF00111.27 AID30688.1 - 1.2e-07 31.6 0.0 6.9e-07 29.1 0.0 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Actino_peptide PF14408.6 AID30688.1 - 0.0091 16.1 0.2 0.06 13.5 0.0 2.3 2 0 0 2 2 2 1 Ribosomally synthesised peptide in actinomycetes DUF1127 PF06568.11 AID30689.1 - 0.058 13.1 0.0 0.088 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) Abhydrolase_3 PF07859.13 AID30690.1 - 2.9e-46 158.0 0.0 3.7e-46 157.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 AID30690.1 - 2.8e-10 39.6 0.0 4.4e-10 39.0 0.0 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase Lipase_3 PF01764.25 AID30690.1 - 0.089 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) LysR_substrate PF03466.20 AID30691.1 - 1.4e-29 103.0 0.6 1.8e-29 102.6 0.6 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID30691.1 - 1.4e-19 69.8 0.1 2.7e-19 68.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID30691.1 - 0.064 13.1 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_18 PF12833.7 AID30694.1 - 5.2e-24 84.3 0.3 1.1e-23 83.3 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30694.1 - 1.3e-14 53.8 0.0 6.6e-06 26.1 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DJ-1_PfpI PF01965.24 AID30694.1 - 7.2e-14 51.9 0.0 9e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family ABC_tran PF00005.27 AID30695.1 - 1.3e-30 106.7 0.0 1.8e-30 106.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30695.1 - 4.2e-05 23.5 0.0 0.034 14.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 AID30695.1 - 0.00036 21.0 0.0 0.0053 17.2 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID30695.1 - 0.0019 18.6 0.0 0.0048 17.3 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID30695.1 - 0.0055 17.0 0.1 0.016 15.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID30695.1 - 0.0065 16.4 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 AID30695.1 - 0.0075 15.7 0.0 3.3 7.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 AID30695.1 - 0.013 15.1 0.0 0.75 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 AID30695.1 - 0.014 15.1 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 AID30695.1 - 0.015 15.6 0.2 0.27 11.5 0.0 2.4 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID30695.1 - 0.02 14.8 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 AID30695.1 - 0.031 14.2 0.0 0.084 12.8 0.0 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea SbcCD_C PF13558.6 AID30695.1 - 0.031 14.5 0.1 0.089 13.0 0.1 1.7 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Mg_chelatase PF01078.21 AID30695.1 - 0.048 13.0 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 AID30695.1 - 0.077 12.7 0.0 0.48 10.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID30695.1 - 0.092 13.3 0.1 0.24 12.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID30695.1 - 0.098 12.8 0.0 0.18 11.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID30695.1 - 0.11 12.4 0.0 0.26 11.2 0.0 1.6 2 0 0 2 2 1 0 NACHT domain MMR_HSR1 PF01926.23 AID30695.1 - 0.13 12.4 0.0 0.41 10.8 0.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF4214 PF13946.6 AID30695.1 - 0.13 12.3 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 1 0 Domain of unknown function (DUF4214) RNA_helicase PF00910.22 AID30695.1 - 0.14 12.5 0.0 0.63 10.5 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA_23 PF13476.6 AID30695.1 - 0.16 12.5 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 AID30695.1 - 0.18 11.3 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 AID30695.1 - 0.21 10.8 0.0 0.38 9.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain BPD_transp_1 PF00528.22 AID30696.1 - 2.8e-23 82.6 15.0 2.8e-23 82.6 15.0 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1 PF09084.11 AID30697.1 - 4.1e-22 79.2 0.1 5.1e-22 78.9 0.1 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 AID30697.1 - 2.8e-19 69.8 0.6 5.7e-19 68.8 0.6 1.4 1 1 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 AID30697.1 - 5.2e-06 26.2 0.3 9.7e-06 25.3 0.2 1.5 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 AID30697.1 - 4.7e-05 22.9 0.2 7.5e-05 22.3 0.2 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 AID30697.1 - 9.4e-05 22.0 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 NMT1-like family DUF1194 PF06707.11 AID30698.1 - 3.8e-82 274.5 0.0 4.6e-82 274.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1194) VWA_2 PF13519.6 AID30698.1 - 5.3e-07 30.2 0.0 7.5e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 AID30698.1 - 0.12 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 von Willebrand factor type A domain GCV_T PF01571.21 AID30699.1 - 3.7e-58 196.9 0.1 6.2e-57 192.9 0.0 2.1 2 0 0 2 2 2 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID30699.1 - 2.8e-37 129.1 0.6 4.1e-37 128.6 0.1 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAO_M PF16350.5 AID30699.1 - 2.6e-16 59.7 0.6 7.8e-16 58.2 0.6 1.9 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain GCV_T_C PF08669.11 AID30699.1 - 1e-11 44.6 0.1 3e-11 43.1 0.1 1.9 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID30699.1 - 0.0052 16.9 0.0 0.013 15.7 0.0 1.6 1 1 0 1 1 1 1 Sarcosine oxidase, gamma subunit family FAD_binding_3 PF01494.19 AID30699.1 - 0.0059 15.9 0.3 0.11 11.8 0.0 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 AID30699.1 - 0.11 11.6 0.0 0.19 10.8 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Trp_halogenase PF04820.14 AID30699.1 - 0.24 10.2 0.5 0.37 9.6 0.0 1.5 2 0 0 2 2 2 0 Tryptophan halogenase Ldh_1_N PF00056.23 AID30699.1 - 0.26 11.4 0.3 1 9.5 0.0 1.9 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Methyltransf_21 PF05050.12 AID30700.1 - 1.4e-24 87.1 0.0 2e-24 86.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain GT87 PF09594.10 AID30700.1 - 1.8e-05 24.6 35.1 1.8e-05 24.6 35.1 2.4 3 0 0 3 3 3 1 Glycosyltransferase family 87 Aminotran_3 PF00202.21 AID30701.1 - 1.2e-87 294.3 0.0 1.6e-87 293.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 AID30701.1 - 0.0013 17.9 0.0 0.0019 17.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Androgen_recep PF02166.16 AID30701.1 - 0.51 9.1 2.3 0.27 10.0 0.1 1.6 2 0 0 2 2 2 0 Androgen receptor Epimerase PF01370.21 AID30702.1 - 1.7e-31 109.5 0.0 2.1e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID30702.1 - 8.8e-25 87.8 0.0 3.6e-24 85.8 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID30702.1 - 1.3e-15 57.2 0.0 1.8e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID30702.1 - 2.2e-13 49.8 0.0 2.9e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 AID30702.1 - 1.1e-08 35.2 0.0 1.5e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 AID30702.1 - 1.5e-06 27.5 0.0 0.00015 21.0 0.0 2.3 2 0 0 2 2 2 1 Male sterility protein Sacchrp_dh_NADP PF03435.18 AID30702.1 - 9.9e-06 25.8 0.1 1.9e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain adh_short PF00106.25 AID30702.1 - 0.0022 17.5 0.0 0.0048 16.4 0.0 1.6 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 AID30702.1 - 0.0032 17.7 0.0 0.0062 16.8 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain adh_short_C2 PF13561.6 AID30702.1 - 0.012 15.2 0.0 0.022 14.3 0.0 1.5 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID30702.1 - 0.045 13.7 0.1 0.33 10.9 0.1 2.2 1 1 0 1 1 1 0 KR domain EamA PF00892.20 AID30703.1 - 6.4e-07 29.6 12.3 1.4e-06 28.5 12.4 1.6 1 1 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 AID30703.1 - 0.012 16.2 8.1 0.032 14.9 8.1 1.8 1 1 0 1 1 1 0 Small Multidrug Resistance protein TMEM234 PF10639.9 AID30703.1 - 0.015 15.3 2.2 0.016 15.3 1.6 1.4 1 1 0 1 1 1 0 Putative transmembrane family 234 DUF202 PF02656.15 AID30703.1 - 0.083 13.4 0.3 0.083 13.4 0.3 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF4131 PF13567.6 AID30703.1 - 0.085 12.5 3.7 0.15 11.7 1.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) FAD_binding_4 PF01565.23 AID30704.1 - 1.3e-23 83.3 0.3 3e-23 82.1 0.3 1.6 1 0 0 1 1 1 1 FAD binding domain FAD_binding_5 PF00941.21 AID30704.1 - 0.059 13.1 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase UbiA PF01040.18 AID30705.1 - 7.3e-21 74.6 18.0 1.4e-20 73.7 18.0 1.4 1 0 0 1 1 1 1 UbiA prenyltransferase family HAD PF12710.7 AID30705.1 - 1.9e-08 35.0 2.7 1.2e-06 29.0 2.7 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF2556 PF10831.8 AID30705.1 - 0.031 14.2 0.3 0.089 12.7 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2556) LPAM_1 PF08139.12 AID30706.1 - 0.34 11.5 0.4 0.34 11.5 0.4 2.0 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site HTH_18 PF12833.7 AID30707.1 - 2.1e-22 79.2 0.8 1.7e-21 76.3 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30707.1 - 1e-17 63.8 0.0 1.8e-07 31.1 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family NAD_binding_10 PF13460.6 AID30708.1 - 4.8e-07 29.8 1.6 1.2e-06 28.6 0.1 1.9 2 0 0 2 2 2 1 NAD(P)H-binding MS_channel PF00924.18 AID30709.1 - 3.5e-52 177.0 1.6 3.5e-52 177.0 1.6 3.5 4 0 0 4 4 4 1 Mechanosensitive ion channel DUF3262 PF11660.8 AID30709.1 - 0.066 13.6 0.6 0.066 13.6 0.6 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3262) DUF3772 PF12607.8 AID30709.1 - 2.7 7.8 5.4 0.49 10.2 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3772) DAO PF01266.24 AID30710.1 - 1.4e-58 199.1 1.5 1.8e-58 198.8 1.5 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID30710.1 - 3.8e-07 29.7 0.4 0.0055 16.0 1.3 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID30710.1 - 1.1e-06 28.0 3.3 0.0009 18.4 0.6 2.1 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 AID30710.1 - 1.4e-06 28.4 0.0 2.2e-05 24.6 0.1 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID30710.1 - 1e-05 25.0 1.3 0.033 13.4 0.3 2.2 2 0 0 2 2 2 2 FAD binding domain Thi4 PF01946.17 AID30710.1 - 2.5e-05 23.6 0.3 7.9e-05 22.0 0.0 1.8 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.14 AID30710.1 - 6.8e-05 21.9 3.7 0.0084 15.0 0.6 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 AID30710.1 - 9.6e-05 21.7 0.3 0.016 14.5 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID30710.1 - 0.00048 18.9 0.2 0.5 9.0 0.0 2.3 2 1 0 2 2 2 2 HI0933-like protein GMC_oxred_N PF00732.19 AID30710.1 - 0.0013 18.2 0.1 0.62 9.4 0.1 2.1 2 0 0 2 2 2 2 GMC oxidoreductase NAD_binding_9 PF13454.6 AID30710.1 - 0.048 13.7 0.3 0.42 10.6 0.0 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding Pyr_redox PF00070.27 AID30710.1 - 0.059 13.9 0.6 15 6.3 0.6 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase MCRA PF06100.11 AID30710.1 - 0.06 12.1 0.1 0.11 11.3 0.1 1.3 1 0 0 1 1 1 0 MCRA family Amino_oxidase PF01593.24 AID30710.1 - 0.061 12.6 0.2 1.8 7.8 0.0 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 AID30710.1 - 0.084 12.2 5.6 1.3 8.3 5.6 2.1 1 1 0 1 1 1 0 FAD dependent oxidoreductase Rhodanese PF00581.20 AID30710.1 - 0.17 12.4 0.0 0.36 11.4 0.0 1.5 1 0 0 1 1 1 0 Rhodanese-like domain SoxD PF04267.12 AID30711.1 - 4.4e-30 103.6 0.1 5.6e-30 103.3 0.1 1.1 1 0 0 1 1 1 1 Sarcosine oxidase, delta subunit family Lar_restr_allev PF14354.6 AID30711.1 - 0.085 13.3 0.8 0.11 12.9 0.8 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar Ser_hydrolase PF06821.13 AID30711.1 - 0.086 12.7 0.0 0.087 12.7 0.0 1.0 1 0 0 1 1 1 0 Serine hydrolase zf-RING_7 PF02591.15 AID30711.1 - 0.29 11.3 2.1 3.7 7.8 0.4 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain GCV_T PF01571.21 AID30712.1 - 5e-72 242.4 0.6 8.8e-72 241.5 0.6 1.4 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SO_alpha_A3 PF17806.1 AID30712.1 - 6.5e-35 119.3 0.0 1.5e-34 118.2 0.0 1.7 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_4 PF13510.6 AID30712.1 - 2.8e-25 88.2 0.0 1.4e-24 85.9 0.0 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Pyr_redox_2 PF07992.14 AID30712.1 - 3.8e-15 55.9 0.0 5.5e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GCV_T_C PF08669.11 AID30712.1 - 3.1e-14 52.7 0.7 1.7e-13 50.3 0.0 2.7 3 0 0 3 3 3 1 Glycine cleavage T-protein C-terminal barrel domain FAD_binding_2 PF00890.24 AID30712.1 - 8.9e-12 44.8 1.4 8.7e-10 38.2 0.4 3.0 1 1 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 AID30712.1 - 2.6e-08 33.7 0.3 5.1e-08 32.7 0.3 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 AID30712.1 - 1e-06 27.7 0.1 2.3e-06 26.6 0.1 1.5 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_3 PF13738.6 AID30712.1 - 2.6e-06 26.9 0.1 0.0014 17.9 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID30712.1 - 5.2e-06 26.6 0.0 2.9e-05 24.2 0.0 2.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID30712.1 - 5e-05 22.7 0.1 9.7e-05 21.8 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 AID30712.1 - 0.003 17.2 5.3 0.016 14.8 2.8 3.5 3 1 0 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.22 AID30712.1 - 0.0034 16.5 0.1 0.0034 16.5 0.1 2.8 3 0 0 3 3 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID30712.1 - 0.0043 16.4 0.1 0.0043 16.4 0.1 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 AID30712.1 - 0.01 14.9 1.7 0.013 14.6 0.1 2.0 3 0 0 3 3 3 0 Lycopene cyclase protein Thi4 PF01946.17 AID30712.1 - 0.012 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Thi4 family Pyr_redox PF00070.27 AID30712.1 - 0.033 14.7 0.1 0.14 12.7 0.0 2.1 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AID30712.1 - 0.06 13.8 0.2 8.6 6.9 0.0 2.6 2 0 0 2 2 2 0 Putative NAD(P)-binding SoxG PF04268.12 AID30713.1 - 2.5e-56 189.9 1.0 3e-56 189.7 1.0 1.1 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family GCV_T PF01571.21 AID30713.1 - 7.3e-08 32.1 0.0 9.7e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain MFS_1 PF07690.16 AID30714.1 - 6.6e-51 173.3 63.6 6.3e-49 166.8 48.5 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30714.1 - 3.2e-08 32.9 10.5 3.2e-08 32.9 10.5 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID30714.1 - 4.6e-07 29.0 21.5 7.2e-06 25.1 6.1 2.2 2 0 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 AID30714.1 - 0.00044 18.9 3.9 0.00044 18.9 3.9 3.0 3 1 0 3 3 3 2 MFS/sugar transport protein Nitroreductase PF00881.24 AID30715.1 - 9.8e-37 126.6 0.0 1.2e-36 126.3 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 AID30715.1 - 1.6e-08 34.4 0.0 0.028 14.0 0.0 3.0 2 1 1 3 3 3 3 Putative TM nitroreductase HTH_31 PF13560.6 AID30717.1 - 9.7e-14 51.5 0.6 2.1e-13 50.4 0.6 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 AID30717.1 - 6e-11 41.9 0.0 1e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 AID30717.1 - 1.5e-10 41.0 0.0 2.2e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID30717.1 - 4.3e-06 26.6 0.0 7e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID30717.1 - 9.9e-05 21.8 0.1 0.00023 20.6 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 AID30717.1 - 0.0072 16.1 0.1 0.014 15.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID30717.1 - 0.036 13.9 0.2 0.079 12.8 0.2 1.6 1 0 0 1 1 1 0 Homeodomain-like domain KorB PF08535.10 AID30717.1 - 0.043 13.8 0.0 0.071 13.2 0.0 1.4 1 0 0 1 1 1 0 KorB domain HTH_37 PF13744.6 AID30717.1 - 0.052 13.5 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_35 PF13693.6 AID30717.1 - 0.15 12.1 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 AID30717.1 - 0.16 11.7 0.0 0.38 10.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 GCV_T PF01571.21 AID30718.1 - 1.2e-57 195.2 0.0 1.8e-57 194.7 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID30718.1 - 4.8e-55 187.5 0.1 7.4e-55 186.9 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GCV_T_C PF08669.11 AID30718.1 - 2.5e-17 62.6 0.0 5.7e-17 61.4 0.0 1.7 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 AID30718.1 - 4.9e-17 62.0 0.1 1.6e-16 60.4 0.1 2.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain Pyr_redox_3 PF13738.6 AID30718.1 - 1.8e-06 27.5 0.0 0.014 14.7 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID30718.1 - 0.0022 17.3 0.0 1.1 8.4 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID30718.1 - 0.0067 16.6 0.1 0.041 14.1 0.1 2.5 2 1 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 AID30718.1 - 0.015 14.6 0.1 0.061 12.6 0.1 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 AID30718.1 - 0.017 14.2 0.0 0.023 13.8 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_9 PF13454.6 AID30718.1 - 0.045 13.7 0.1 2 8.4 0.0 2.8 3 0 0 3 3 3 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 AID30718.1 - 0.14 11.3 0.1 0.88 8.8 0.1 1.9 2 0 0 2 2 2 0 FAD binding domain NAD_binding_7 PF13241.6 AID30718.1 - 0.15 12.5 0.0 0.35 11.3 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding S-methyl_trans PF02574.16 AID30719.1 - 1e-61 209.1 0.0 1.2e-61 208.9 0.0 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase ALAD PF00490.21 AID30719.1 - 0.012 14.8 0.0 0.34 10.0 0.0 2.2 2 0 0 2 2 2 0 Delta-aminolevulinic acid dehydratase PMBR PF09373.10 AID30719.1 - 0.21 11.8 0.1 0.66 10.2 0.1 1.8 1 0 0 1 1 1 0 Pseudomurein-binding repeat Aminotran_1_2 PF00155.21 AID30720.1 - 2.6e-61 207.8 0.0 2.9e-61 207.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AID30720.1 - 4.8e-10 38.5 0.0 7.1e-10 38.0 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 AID30720.1 - 7.3e-07 28.8 0.1 1.1e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AID30720.1 - 2.5e-06 26.7 0.0 4.5e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AID30720.1 - 0.00011 21.6 0.1 0.00042 19.7 0.0 1.8 2 0 0 2 2 2 1 Beta-eliminating lyase Aminotran_3 PF00202.21 AID30720.1 - 0.0089 14.7 0.0 0.014 14.0 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-III Alliinase_C PF04864.13 AID30720.1 - 0.02 13.8 0.0 0.054 12.4 0.0 1.7 2 0 0 2 2 2 0 Allinase GCV_T PF01571.21 AID30721.1 - 5.4e-79 265.2 0.3 1.4e-78 263.8 0.1 1.8 2 0 0 2 2 2 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID30721.1 - 2.2e-58 198.6 0.5 3.3e-58 198.0 0.5 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GCV_T_C PF08669.11 AID30721.1 - 1.4e-24 85.8 0.1 9.6e-23 79.9 0.0 3.3 3 0 0 3 3 3 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 AID30721.1 - 5.6e-19 68.2 0.6 1.9e-18 66.5 0.4 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase central domain SoxG PF04268.12 AID30721.1 - 4.6e-06 26.8 0.0 9e-05 22.7 0.0 2.3 1 1 1 2 2 2 1 Sarcosine oxidase, gamma subunit family FAD_binding_2 PF00890.24 AID30721.1 - 6.8e-06 25.4 5.5 8.9e-05 21.7 5.5 2.3 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID30721.1 - 1.9e-05 24.0 0.5 0.18 11.0 0.1 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GMC_oxred_N PF00732.19 AID30721.1 - 3.6e-05 23.3 1.0 0.023 14.1 0.6 2.8 3 0 0 3 3 3 2 GMC oxidoreductase Trp_halogenase PF04820.14 AID30721.1 - 3.8e-05 22.7 0.6 0.00046 19.2 0.6 2.0 1 1 0 1 1 1 1 Tryptophan halogenase NAD_binding_8 PF13450.6 AID30721.1 - 8.2e-05 22.8 0.3 0.00035 20.7 0.3 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID30721.1 - 0.00015 22.3 0.1 0.074 13.6 0.1 2.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID30721.1 - 0.0073 16.3 2.0 0.032 14.2 0.2 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding GIDA PF01134.22 AID30721.1 - 0.0097 15.0 0.0 0.016 14.3 0.0 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 AID30721.1 - 0.02 14.2 0.2 0.047 12.9 0.0 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID30721.1 - 0.039 13.2 0.4 0.094 11.9 0.4 1.6 1 0 0 1 1 1 0 Thi4 family FAD_binding_3 PF01494.19 AID30721.1 - 0.043 13.1 1.0 4.2 6.5 0.3 2.8 3 0 0 3 3 3 0 FAD binding domain Flavodoxin_2 PF02525.17 AID30722.1 - 8.8e-35 120.2 0.0 1e-34 120.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 AID30722.1 - 3.6e-13 49.5 0.0 4.5e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID30723.1 - 5e-30 104.7 0.0 5.5e-30 104.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 AID30723.1 - 2.8e-13 49.9 0.0 3.6e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase FAD_binding_4 PF01565.23 AID30724.1 - 3.9e-29 101.2 0.4 2.1e-28 98.8 0.5 1.9 2 0 0 2 2 2 1 FAD binding domain Amidohydro_3 PF07969.11 AID30725.1 - 1.2e-32 114.1 5.3 1.3e-24 87.5 0.8 2.1 1 1 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 AID30725.1 - 3.6e-16 59.4 0.0 4.8e-16 59.0 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family DUF3695 PF12494.8 AID30725.1 - 0.071 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3695) A_deaminase PF00962.22 AID30725.1 - 0.1 11.9 0.0 0.3 10.4 0.0 1.7 1 1 0 1 1 1 0 Adenosine/AMP deaminase BPD_transp_1 PF00528.22 AID30726.1 - 7.7e-21 74.7 14.8 7.7e-21 74.7 14.8 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Tlr3_TMD PF17968.1 AID30726.1 - 0.098 12.9 2.9 0.39 10.9 2.9 2.0 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain ABC_tran PF00005.27 AID30727.1 - 4.1e-30 105.1 0.0 5.6e-30 104.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30727.1 - 0.0018 18.2 0.2 0.058 13.2 0.1 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 AID30727.1 - 0.0042 17.0 0.0 0.0065 16.4 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 AID30727.1 - 0.011 15.2 0.0 0.47 9.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID30727.1 - 0.014 15.6 0.1 0.23 11.7 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 AID30727.1 - 0.017 15.6 0.2 0.1 13.0 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID30727.1 - 0.027 14.9 0.0 0.046 14.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 AID30727.1 - 0.035 13.9 0.1 0.064 13.0 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30727.1 - 0.23 11.4 0.2 0.38 10.6 0.2 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 AID30727.1 - 0.24 11.4 0.7 1.6 8.8 0.2 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) NMT1 PF09084.11 AID30728.1 - 7.4e-22 78.4 0.1 1.1e-21 77.8 0.1 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Ribonuc_L-PSP PF01042.21 AID30729.1 - 2e-22 79.5 0.0 2.3e-22 79.3 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Creatininase PF02633.14 AID30730.1 - 2.4e-62 210.5 0.7 3e-62 210.2 0.7 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase CBS PF00571.28 AID30730.1 - 0.005 17.3 0.0 0.22 12.0 0.0 2.6 3 0 0 3 3 3 1 CBS domain ParD_antitoxin PF03693.14 AID30731.1 - 4.8e-06 26.9 0.0 5.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RHH_8 PF17723.1 AID30731.1 - 0.024 14.8 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family ParE_toxin PF05016.15 AID30732.1 - 2.5e-06 28.0 1.5 2.6e-06 28.0 1.5 1.0 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Y_phosphatase PF00102.27 AID30733.1 - 0.00037 20.2 0.0 0.0005 19.7 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 AID30733.1 - 0.0018 18.1 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 AID30733.1 - 0.081 13.0 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Aminotran_1_2 PF00155.21 AID30734.1 - 4.5e-24 85.3 0.0 6.3e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 AID30734.1 - 0.061 12.2 0.0 0.081 11.8 0.0 1.1 1 0 0 1 1 1 0 Allinase Erythro-docking PF09277.11 AID30734.1 - 0.15 12.0 2.3 0.22 11.4 0.5 2.2 3 0 0 3 3 3 0 Erythronolide synthase, docking CobD_Cbib PF03186.13 AID30735.1 - 8e-91 304.1 2.1 9.9e-91 303.8 2.1 1.1 1 0 0 1 1 1 1 CobD/Cbib protein DUF4191 PF13829.6 AID30735.1 - 0.015 14.7 0.3 0.032 13.6 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) FA_desaturase PF00487.24 AID30735.1 - 5.8 6.7 12.7 0.16 11.8 3.2 2.4 1 1 1 3 3 3 0 Fatty acid desaturase CobA_CobO_BtuR PF02572.15 AID30736.1 - 5.5e-62 209.0 0.3 8.4e-62 208.4 0.3 1.3 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Co_AT_N PF12557.8 AID30736.1 - 3.9e-09 36.2 4.7 7.4e-09 35.3 4.7 1.5 1 0 0 1 1 1 1 Cob(I)alamin adenosyltransferase N terminal AAA_25 PF13481.6 AID30736.1 - 0.0078 15.8 2.8 0.02 14.4 2.7 1.8 1 1 0 1 1 1 1 AAA domain AAA_26 PF13500.6 AID30736.1 - 0.015 15.1 0.1 0.032 14.1 0.0 1.5 2 0 0 2 2 2 0 AAA domain AtuA PF07287.11 AID30736.1 - 0.059 12.1 0.4 0.12 11.1 0.2 1.2 1 1 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA CbiA PF01656.23 AID30736.1 - 0.091 12.8 1.6 0.16 12.0 0.3 2.0 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 AID30736.1 - 0.19 12.0 1.5 0.24 11.7 0.3 1.8 2 0 0 2 2 2 0 AAA domain CobU PF02283.16 AID30737.1 - 6.2e-41 139.8 0.0 6.8e-41 139.6 0.0 1.0 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase CbtA PF09490.10 AID30738.1 - 4.1e-61 206.9 28.8 6.4e-61 206.2 28.8 1.3 1 1 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) DUF2561 PF10812.8 AID30738.1 - 0.00066 19.8 2.2 0.00066 19.8 2.2 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2561) DUF4149 PF13664.6 AID30738.1 - 4.9 7.5 8.6 9.6 6.6 0.1 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4149) CbtB PF09489.10 AID30739.1 - 7e-23 80.5 3.7 8.2e-23 80.3 3.7 1.1 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) MWFE PF15879.5 AID30739.1 - 0.096 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit Ring_hydroxyl_A PF00848.19 AID30740.1 - 7.7e-39 133.9 0.6 1.3e-38 133.1 0.3 1.5 2 0 0 2 2 2 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 AID30740.1 - 2e-18 66.1 0.0 5.3e-18 64.7 0.0 1.7 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain MFS_1 PF07690.16 AID30741.1 - 7.5e-29 100.7 69.5 6e-26 91.2 41.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1624 PF07786.12 AID30743.1 - 9e-79 264.1 15.7 1.1e-78 263.9 15.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 AID30743.1 - 8e-05 21.9 21.2 0.034 13.2 8.7 2.4 1 1 1 2 2 2 2 Acyltransferase family PEMT PF04191.13 AID30744.1 - 2.6e-15 56.7 1.1 3.9e-15 56.2 1.1 1.3 1 0 0 1 1 1 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 AID30744.1 - 4.2e-05 22.5 0.0 5.2e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family LysE PF01810.18 AID30744.1 - 0.00089 18.8 0.2 0.00089 18.8 0.2 1.9 1 1 1 2 2 2 1 LysE type translocator ICMT PF04140.14 AID30744.1 - 0.00097 19.5 0.3 0.0016 18.8 0.3 1.4 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family VirB3 PF05101.13 AID30744.1 - 0.04 14.2 6.3 0.057 13.7 0.0 2.3 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein TatC PF00902.18 AID30744.1 - 1 9.1 7.6 4.8 6.9 7.6 1.9 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) ABC2_membrane_3 PF12698.7 AID30744.1 - 5.1 6.1 7.8 0.31 10.1 0.5 1.9 1 1 1 2 2 2 0 ABC-2 family transporter protein MerR_1 PF13411.6 AID30745.1 - 1.7e-16 60.1 0.3 2.9e-16 59.3 0.3 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR-DNA-bind PF09278.11 AID30745.1 - 7.7e-13 48.8 3.9 1.1e-12 48.3 3.9 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR PF00376.23 AID30745.1 - 2.8e-10 39.8 0.2 4.9e-10 39.0 0.2 1.5 1 0 0 1 1 1 1 MerR family regulatory protein APG6_N PF17675.1 AID30745.1 - 0.0013 19.3 0.5 0.0015 19.0 0.5 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region BLOC1_2 PF10046.9 AID30745.1 - 0.008 16.5 0.1 0.011 16.0 0.1 1.3 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 YqjK PF13997.6 AID30745.1 - 0.008 16.4 0.6 0.023 14.9 0.6 1.7 1 0 0 1 1 1 1 YqjK-like protein DegS PF05384.11 AID30745.1 - 0.0095 15.4 1.4 0.014 14.9 1.4 1.4 1 0 0 1 1 1 1 Sensor protein DegS FUSC PF04632.12 AID30745.1 - 0.012 14.2 0.1 0.013 14.0 0.1 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family HTH_17 PF12728.7 AID30745.1 - 0.022 14.9 2.5 0.034 14.3 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain MerR_2 PF13591.6 AID30745.1 - 0.022 14.6 0.9 0.097 12.5 0.1 2.4 1 1 1 2 2 2 0 MerR HTH family regulatory protein HTH_32 PF13565.6 AID30745.1 - 0.16 12.6 3.2 1.3 9.7 3.2 2.1 1 1 0 1 1 1 0 Homeodomain-like domain MgtE PF01769.16 AID30746.1 - 1.3e-26 93.4 6.3 1.3e-26 93.4 6.3 1.7 2 0 0 2 2 2 1 Divalent cation transporter MgtE_N PF03448.17 AID30746.1 - 5.1e-21 75.2 7.3 5.1e-21 75.2 7.3 2.9 2 1 1 3 3 3 1 MgtE intracellular N domain CBS PF00571.28 AID30746.1 - 4.5e-15 55.8 2.0 6.6e-07 29.7 0.4 3.1 3 0 0 3 3 3 2 CBS domain GAF PF01590.26 AID30746.1 - 0.00088 19.9 0.0 0.0022 18.6 0.0 1.8 1 1 0 1 1 1 1 GAF domain FliG_C PF01706.16 AID30746.1 - 0.049 13.8 0.7 0.15 12.2 0.7 1.9 1 1 0 1 1 1 0 FliG C-terminal domain T4_baseplate PF12322.8 AID30746.1 - 0.15 11.5 1.7 0.5 9.8 0.1 2.4 2 2 0 3 3 3 0 T4 bacteriophage base plate protein F-box PF00646.33 AID30746.1 - 0.16 11.9 0.1 0.66 9.9 0.0 1.9 2 0 0 2 2 2 0 F-box domain GerE PF00196.19 AID30748.1 - 3.8e-17 61.6 0.2 9.5e-17 60.3 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family Response_reg PF00072.24 AID30748.1 - 9.1e-12 45.1 0.0 1.4e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 AID30748.1 - 5e-06 26.1 0.0 9.8e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 AID30748.1 - 4.8e-05 22.8 0.0 0.00011 21.7 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 AID30748.1 - 0.00017 21.3 1.2 0.0015 18.3 0.0 2.4 1 1 1 2 2 2 1 Homeodomain-like domain HTH_20 PF12840.7 AID30748.1 - 0.0014 18.7 0.0 0.003 17.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID30748.1 - 0.0038 16.7 0.0 0.01 15.3 0.0 1.7 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_10 PF04967.12 AID30748.1 - 0.0057 16.4 0.1 0.017 14.9 0.0 1.8 2 0 0 2 2 2 1 HTH DNA binding domain HTH_5 PF01022.20 AID30748.1 - 0.013 15.3 0.0 0.032 14.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_38 PF13936.6 AID30748.1 - 0.023 14.4 0.0 0.051 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 AID30748.1 - 0.1 12.5 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_30 PF13556.6 AID30748.1 - 0.11 12.3 0.1 0.36 10.7 0.1 1.9 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Aminotran_5 PF00266.19 AID30749.1 - 1.4e-16 60.4 0.0 1.8e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V HpcH_HpaI PF03328.14 AID30750.1 - 2.4e-44 151.1 0.0 3.6e-44 150.5 0.0 1.3 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 AID30750.1 - 5e-10 39.1 0.0 0.0002 20.6 0.0 2.1 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold Malate_synthase PF01274.22 AID30750.1 - 0.004 15.5 0.1 0.34 9.1 0.0 2.1 2 0 0 2 2 2 2 Malate synthase Peptidase_C16 PF01831.17 AID30750.1 - 0.21 11.3 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Peptidase C16 family ATP-grasp_2 PF08442.10 AID30751.1 - 4.5e-76 254.9 0.0 6.6e-76 254.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 AID30751.1 - 1e-24 87.1 1.1 1.7e-24 86.4 1.1 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 AID30751.1 - 4.8e-13 49.1 0.0 8.7e-13 48.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CoA_binding PF02629.19 AID30752.1 - 3.5e-30 104.6 5.1 1.4e-28 99.4 0.1 3.0 2 1 1 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 AID30752.1 - 7.7e-12 45.3 0.2 1.6e-11 44.3 0.2 1.6 1 1 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 AID30752.1 - 1.2e-10 41.3 0.0 2e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 AID30752.1 - 7e-05 23.3 0.0 0.00075 20.0 0.0 2.4 3 0 0 3 3 3 1 CoA binding domain DapB_N PF01113.20 AID30752.1 - 0.0024 18.0 0.6 0.093 12.9 0.0 2.4 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 AID30752.1 - 0.005 17.7 1.1 0.12 13.2 0.0 2.6 3 1 0 3 3 3 1 Oxidoreductase family, NAD-binding Rossmann fold GCV_T_C PF08669.11 AID30753.1 - 0.01 15.7 0.0 0.011 15.6 0.0 1.0 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain Abhydrolase_1 PF00561.20 AID30755.1 - 1e-23 84.3 0.1 2.6e-23 83.0 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID30755.1 - 6.8e-14 51.7 0.1 9.2e-14 51.3 0.1 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID30755.1 - 9.6e-13 49.2 3.6 1.3e-12 48.9 3.6 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 AID30755.1 - 7.6e-08 32.4 0.0 1.4e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein DLH PF01738.18 AID30755.1 - 1.3e-07 31.4 0.1 0.00015 21.4 0.1 2.1 2 0 0 2 2 2 2 Dienelactone hydrolase family Peptidase_S9 PF00326.21 AID30755.1 - 4.5e-06 26.3 0.1 0.00016 21.3 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase family FSH1 PF03959.13 AID30755.1 - 5.8e-05 22.8 0.0 0.00068 19.4 0.0 2.0 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Thioesterase PF00975.20 AID30755.1 - 0.00013 22.2 0.1 0.00019 21.6 0.1 1.4 1 1 0 1 1 1 1 Thioesterase domain Abhydrolase_5 PF12695.7 AID30755.1 - 0.00021 21.1 0.0 0.0049 16.6 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 AID30755.1 - 0.066 12.8 0.0 0.15 11.6 0.0 1.8 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) PhoPQ_related PF10142.9 AID30755.1 - 0.078 11.6 0.0 0.1 11.3 0.0 1.1 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Palm_thioest PF02089.15 AID30755.1 - 0.12 12.2 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Palmitoyl protein thioesterase UPF0227 PF05728.12 AID30755.1 - 0.19 11.7 0.0 1.8 8.4 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 AID30756.1 - 3.4e-14 54.0 0.7 5.4e-14 53.3 0.7 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 AID30756.1 - 2.1e-12 47.1 0.2 2.3e-11 43.7 0.1 2.0 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID30756.1 - 1.9e-07 30.6 0.3 1e-05 24.9 0.3 2.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID30756.1 - 3e-06 27.1 0.3 0.00045 20.0 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 AID30756.1 - 0.0015 18.4 0.4 0.049 13.5 0.4 2.2 1 1 0 1 1 1 1 Serine hydrolase Glyco_hydro_3_C PF01915.22 AID30756.1 - 0.092 12.7 0.6 0.17 11.9 0.1 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase family 3 C-terminal domain Cupin_6 PF12852.7 AID30757.1 - 1.3e-43 148.9 2.1 1.8e-43 148.4 2.1 1.2 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 AID30757.1 - 2.5e-17 62.9 1.4 4.6e-17 62.1 1.4 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID30757.1 - 9.9e-12 44.6 0.0 0.00018 21.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID30757.1 - 2.5e-05 24.2 0.0 7.1e-05 22.7 0.0 1.7 2 0 0 2 2 2 1 AraC-like ligand binding domain AraC_binding_2 PF14525.6 AID30757.1 - 5.4e-05 22.9 1.4 0.00026 20.7 1.4 2.2 1 1 0 1 1 1 1 AraC-binding-like domain Cupin_2 PF07883.11 AID30757.1 - 0.00011 21.8 0.2 0.00024 20.7 0.0 1.6 2 0 0 2 2 2 1 Cupin domain LisH PF08513.11 AID30757.1 - 0.47 10.5 1.5 1.1 9.3 0.0 2.1 2 0 0 2 2 2 0 LisH MipA PF06629.12 AID30758.1 - 1.9e-44 152.5 0.3 2.3e-44 152.2 0.3 1.1 1 0 0 1 1 1 1 MltA-interacting protein MipA Porin_4 PF13609.6 AID30758.1 - 0.0034 17.2 2.4 0.0051 16.6 2.4 1.2 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 AID30758.1 - 0.078 13.1 2.2 0.32 11.1 1.4 2.2 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain Response_reg PF00072.24 AID30759.1 - 1.1e-27 96.4 0.1 1.9e-27 95.7 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID30759.1 - 6.1e-20 71.1 0.2 1.5e-19 69.8 0.0 1.7 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal HATPase_c PF02518.26 AID30760.1 - 8.5e-17 61.7 0.0 1.4e-16 61.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID30760.1 - 4.1e-07 29.9 1.0 1.1e-06 28.5 1.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID30760.1 - 8.5e-05 22.4 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID30760.1 - 0.0039 17.5 7.5 0.0098 16.3 0.3 2.9 3 0 0 3 3 3 2 HAMP domain DUF4282 PF14110.6 AID30760.1 - 0.016 15.9 1.2 1.1 10.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) PrsW-protease PF13367.6 AID30760.1 - 0.067 12.6 0.8 0.13 11.7 0.8 1.4 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease BPL_LplA_LipB PF03099.19 AID30761.1 - 5.2e-06 26.4 0.0 8.4e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Peptidase_M50 PF02163.22 AID30762.1 - 1.3e-09 37.7 4.0 7.4e-06 25.4 0.2 2.3 1 1 1 2 2 2 2 Peptidase family M50 Polyketide_cyc2 PF10604.9 AID30762.1 - 0.0016 18.8 1.3 0.0024 18.1 1.3 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport ABC_tran PF00005.27 AID30764.1 - 9.2e-28 97.5 0.0 1.3e-27 97.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 AID30764.1 - 0.0016 18.8 0.3 0.0038 17.6 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID30764.1 - 0.0084 15.6 0.0 0.046 13.2 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30764.1 - 0.018 14.8 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 AID30764.1 - 0.027 14.0 0.2 0.067 12.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.6 AID30764.1 - 0.029 14.2 0.1 6 6.6 0.0 2.1 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID30764.1 - 0.048 13.9 0.1 0.089 13.1 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID30764.1 - 0.087 12.5 0.2 0.23 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 AID30764.1 - 0.11 12.3 0.0 0.54 10.0 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein MacB_PCD PF12704.7 AID30765.1 - 9.7e-18 65.2 2.8 9.7e-18 65.2 2.8 1.8 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 AID30765.1 - 7.2e-11 42.4 1.6 7.2e-11 42.4 1.6 3.4 3 0 0 3 3 3 1 FtsX-like permease family NYN PF01936.18 AID30765.1 - 0.12 12.8 0.0 6.3 7.3 0.0 2.2 1 1 1 2 2 2 0 NYN domain NDUF_B4 PF07225.12 AID30765.1 - 0.21 11.5 0.4 0.51 10.3 0.1 1.8 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) tRNA-synt_2b PF00587.25 AID30766.1 - 8.6e-32 110.5 0.0 1.2e-31 110.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 AID30766.1 - 5.6e-15 55.3 0.0 1.2e-14 54.2 0.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain DUF1467 PF07330.12 AID30767.1 - 5.7e-28 96.7 0.9 6.4e-28 96.5 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1467) Glyoxalase_4 PF13669.6 AID30768.1 - 5e-23 81.5 0.0 5.7e-23 81.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 AID30768.1 - 5.2e-10 39.6 0.0 5.6e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID30768.1 - 7.7e-09 35.9 0.1 9.5e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID30768.1 - 1.1e-06 29.3 0.0 2.1e-06 28.5 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Lactamase_B PF00753.27 AID30769.1 - 4.8e-18 65.9 6.4 2e-17 63.8 6.4 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID30769.1 - 4.9e-08 32.7 0.0 8.1e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 AID30769.1 - 0.00087 19.2 0.0 0.0021 18.0 0.0 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 AID30769.1 - 0.013 14.9 0.0 0.023 14.1 0.0 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain DUF459 PF04311.13 AID30769.1 - 0.03 13.3 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF459) Lactamase_B_5 PF14597.6 AID30769.1 - 0.083 12.4 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF630 PF04783.12 AID30769.1 - 2.6 8.3 4.2 7.7 6.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF630) Lactamase_B_2 PF12706.7 AID30770.1 - 9.1e-13 48.2 0.0 2.3e-12 46.8 0.0 1.7 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AID30770.1 - 2.6e-11 43.9 0.4 5.8e-11 42.8 0.4 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 AID30770.1 - 7.2e-06 25.8 0.3 3.5e-05 23.6 0.0 2.3 3 0 0 3 3 3 1 Zn-dependent metallo-hydrolase RNA specificity domain BPL_LplA_LipB PF03099.19 AID30771.1 - 1.2e-10 41.3 0.0 2.1e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 AID30771.1 - 4.5e-06 26.5 2.1 1.1e-05 25.3 2.1 1.7 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain Proton_antipo_M PF00361.20 AID30772.1 - 2.4e-89 299.4 24.6 2.4e-89 299.4 24.6 1.6 2 1 0 2 2 2 1 Proton-conducting membrane transporter DUF2788 PF10981.8 AID30772.1 - 0.32 11.0 11.7 0.099 12.7 2.5 3.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2788) UXS1_N PF11803.8 AID30772.1 - 7.2 7.0 7.6 22 5.5 2.5 3.6 2 1 1 3 3 3 0 UDP-glucuronate decarboxylase N-terminal Proton_antipo_M PF00361.20 AID30773.1 - 3.4e-91 305.5 30.0 3.4e-91 305.5 30.0 2.1 2 1 1 3 3 3 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 AID30773.1 - 2.5e-06 27.6 7.5 2.5e-06 27.6 7.5 4.2 3 2 1 4 4 4 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus Proton_antipo_M PF00361.20 AID30774.1 - 1.2e-90 303.7 22.9 2.7e-90 302.5 22.9 1.7 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 AID30774.1 - 1.8e-26 92.0 0.8 1.8e-26 92.0 0.8 4.0 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADH5_C PF06455.11 AID30774.1 - 7.7e-14 51.7 8.4 4.4e-07 29.7 0.0 4.2 4 0 0 4 4 4 2 NADH dehydrogenase subunit 5 C-terminus Proton_antipo_C PF01010.19 AID30774.1 - 0.013 15.2 1.4 0.59 9.7 1.4 2.5 1 1 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus FATC PF02260.20 AID30774.1 - 0.076 12.9 0.1 0.4 10.5 0.0 2.1 2 0 0 2 2 2 0 FATC domain Oxidored_q2 PF00420.24 AID30775.1 - 4.3e-24 84.1 12.2 5.2e-24 83.9 12.2 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PEP-CTERM PF07589.11 AID30775.1 - 1.5 9.0 6.5 2.3 8.5 0.1 3.2 3 1 0 3 3 3 0 PEP-CTERM motif Oxidored_q3 PF00499.20 AID30776.1 - 6.2e-41 139.5 20.9 6.2e-41 139.5 20.9 1.4 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 T4SS_CagC PF16943.5 AID30776.1 - 0.95 9.7 8.2 0.12 12.5 1.5 2.5 3 0 0 3 3 3 0 Cag pathogenicity island, type IV secretory system YdjM PF04307.14 AID30776.1 - 5.1 6.4 9.5 4.3 6.6 7.4 2.1 1 1 1 2 2 2 0 LexA-binding, inner membrane-associated putative hydrolase Fer4 PF00037.27 AID30777.1 - 2.2e-13 49.4 18.1 1.2e-07 31.3 5.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 AID30777.1 - 3.7e-12 46.6 10.1 5.9e-12 46.0 10.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 AID30777.1 - 9.7e-11 42.5 4.9 2.4e-05 25.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 AID30777.1 - 6.8e-10 38.9 3.3 0.00012 22.2 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID30777.1 - 3.5e-09 36.7 9.5 5.7e-09 36.0 9.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID30777.1 - 4.4e-09 36.7 1.3 0.00031 21.1 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID30777.1 - 1.5e-08 34.6 19.8 9.9e-06 25.6 12.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 AID30777.1 - 5.7e-07 29.3 18.3 0.00025 21.0 5.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AID30777.1 - 1.4e-06 28.0 12.0 0.0054 16.8 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 AID30777.1 - 3.4e-06 27.1 10.5 0.00016 21.9 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 AID30777.1 - 0.0004 20.9 11.4 0.062 13.8 12.6 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 AID30777.1 - 0.0065 17.0 13.8 0.25 11.9 3.6 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 AID30777.1 - 0.017 15.3 8.7 4.8 7.4 8.8 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain c-SKI_SMAD_bind PF08782.10 AID30777.1 - 0.037 14.3 6.3 0.71 10.1 0.5 2.5 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Fer4_3 PF12798.7 AID30777.1 - 0.092 13.7 16.3 0.22 12.5 4.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain ETF_QO PF05187.13 AID30777.1 - 0.37 11.0 6.6 1.2 9.3 0.8 2.4 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 AID30777.1 - 0.65 10.9 12.0 2 9.3 1.8 2.2 1 1 2 3 3 2 0 4Fe-4S dicluster domain NADHdh PF00146.21 AID30778.1 - 3e-122 407.6 24.0 3.4e-122 407.4 24.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Molybdopterin PF00384.22 AID30779.1 - 3e-70 237.4 0.0 4e-69 233.6 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin oxidoreductase NADH-G_4Fe-4S_3 PF10588.9 AID30779.1 - 5.7e-18 64.2 0.1 5.7e-18 64.2 0.1 2.1 2 0 0 2 2 2 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NADH_dhqG_C PF09326.11 AID30779.1 - 1.5e-14 54.3 0.0 3.8e-14 53.1 0.0 1.7 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase subunit G, C-terminal Fer2_4 PF13510.6 AID30779.1 - 5.5e-12 45.6 0.0 1.2e-11 44.4 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2 PF00111.27 AID30779.1 - 2.8e-08 33.6 1.2 4.6e-08 32.9 0.1 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain TPP_enzyme_M PF00205.22 AID30779.1 - 0.0014 18.3 1.5 0.1 12.3 1.7 2.7 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Fer4_19 PF06902.11 AID30779.1 - 0.011 15.8 0.1 0.049 13.7 0.0 2.2 2 0 0 2 2 2 0 Divergent 4Fe-4S mono-cluster Fer4 PF00037.27 AID30779.1 - 0.15 11.9 1.4 3.9 7.5 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain HHH_5 PF14520.6 AID30780.1 - 0.0019 18.8 0.2 0.007 16.9 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 AID30780.1 - 0.039 14.2 0.0 0.1 12.8 0.0 1.7 2 0 0 2 2 2 0 Pathogenicity locus IMS_HHH PF11798.8 AID30780.1 - 0.044 14.1 0.2 0.1 13.0 0.2 1.6 1 0 0 1 1 1 0 IMS family HHH motif Goodbye PF17109.5 AID30780.1 - 0.4 11.1 3.2 0.65 10.5 1.7 1.9 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain Complex1_51K PF01512.17 AID30781.1 - 7.6e-48 162.2 0.0 1.1e-47 161.7 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 AID30781.1 - 1.2e-29 102.2 0.1 2.1e-29 101.4 0.1 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 AID30781.1 - 7.1e-09 35.4 0.0 1.4e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 SLBB domain 2Fe-2S_thioredx PF01257.19 AID30782.1 - 1.2e-51 174.4 0.0 1.6e-51 174.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin HHH PF00633.23 AID30782.1 - 0.018 14.9 0.2 0.067 13.1 0.1 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix motif Complex1_49kDa PF00346.19 AID30783.1 - 4.2e-120 399.9 0.0 5e-120 399.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 AID30783.1 - 0.074 11.9 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 AID30784.1 - 2.9e-47 160.3 0.0 4.4e-47 159.7 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 AID30785.1 - 2.6e-23 82.3 0.1 3.4e-23 81.9 0.1 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Secapin PF17521.2 AID30785.1 - 0.036 13.9 0.6 0.26 11.1 0.0 2.6 3 0 0 3 3 3 0 Honey bee peptides Oxidored_q4 PF00507.19 AID30786.1 - 7.5e-39 131.9 3.3 7.5e-39 131.9 3.3 1.4 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF4307 PF14155.6 AID30786.1 - 0.034 14.0 0.0 0.082 12.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) HTH_42 PF06224.12 AID30787.1 - 5.8e-83 279.1 17.1 6.7e-83 278.9 17.1 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF1636 PF07845.11 AID30788.1 - 2e-27 96.0 0.0 2.4e-27 95.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1636) cobW PF02492.19 AID30789.1 - 2e-57 193.6 0.3 3.6e-57 192.8 0.2 1.5 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 AID30789.1 - 4.6e-17 61.7 0.0 7.8e-17 61.0 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain AAA_16 PF13191.6 AID30789.1 - 0.00055 20.4 0.1 0.0013 19.1 0.1 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID30789.1 - 0.00095 19.4 0.0 0.01 16.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 AID30789.1 - 0.0099 15.9 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 AID30789.1 - 0.016 14.9 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 AID30789.1 - 0.017 15.7 0.0 0.18 12.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 AID30789.1 - 0.045 12.7 0.4 0.3 10.0 0.1 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 AID30789.1 - 0.056 13.6 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 AID30789.1 - 0.078 12.9 0.1 0.46 10.4 0.1 2.3 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 AID30789.1 - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_28 PF13521.6 AID30789.1 - 0.15 12.3 0.1 0.3 11.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID30789.1 - 0.16 11.9 0.0 1.6 8.6 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 AID30789.1 - 0.2 11.6 0.1 0.43 10.5 0.1 1.5 1 0 0 1 1 1 0 NTPase CobN-Mg_chel PF02514.16 AID30790.1 - 1.2e-267 890.8 0.0 2.4e-135 452.8 0.0 2.7 1 1 1 2 2 2 2 CobN/Magnesium Chelatase NIR_SIR_ferr PF03460.17 AID30791.1 - 2.2e-13 49.8 0.1 4.2e-09 36.1 0.0 2.7 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain NIR_SIR PF01077.22 AID30791.1 - 0.00033 20.2 0.0 0.016 14.8 0.0 2.5 2 1 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain CbiC PF02570.15 AID30792.1 - 6e-72 241.4 0.3 6.8e-72 241.3 0.3 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase TP_methylase PF00590.20 AID30793.1 - 2.8e-50 171.2 0.4 3.4e-50 170.9 0.4 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 AID30794.1 - 1.7e-38 132.7 0.9 2.1e-38 132.4 0.9 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiJ PF02571.14 AID30795.1 - 1.2e-70 237.7 0.0 1.5e-70 237.4 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK ATPgrasp_N PF18130.1 AID30795.1 - 0.015 15.8 0.3 0.062 13.9 0.1 2.2 2 0 0 2 2 2 0 ATP-grasp N-terminal domain TP_methylase PF00590.20 AID30796.1 - 5.8e-20 72.1 0.5 1.3e-19 71.0 0.5 1.6 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases PCMT PF01135.19 AID30796.1 - 0.02 14.6 0.0 0.078 12.7 0.0 1.7 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.15 AID30796.1 - 0.028 14.1 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_4 PF02390.17 AID30796.1 - 0.057 12.9 0.0 0.14 11.6 0.0 1.7 1 0 0 1 1 1 0 Putative methyltransferase MTS PF05175.14 AID30796.1 - 0.19 11.3 0.0 1.9 8.0 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase small domain CbiG_C PF01890.16 AID30797.1 - 4.8e-25 88.4 4.6 5.4e-25 88.2 4.6 1.0 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus TP_methylase PF00590.20 AID30798.1 - 2.9e-39 135.2 1.6 3.4e-39 135.0 1.6 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 AID30799.1 - 9.9e-41 140.0 5.9 1.4e-40 139.5 5.9 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 AID30799.1 - 0.052 13.9 0.0 0.085 13.2 0.0 1.4 1 0 0 1 1 1 0 Radical SAM superfamily DUF58 PF01882.18 AID30799.1 - 0.057 13.7 0.2 0.21 11.9 0.2 2.0 1 1 0 1 1 1 0 Protein of unknown function DUF58 Pilus_CpaD PF09476.10 AID30799.1 - 0.076 12.7 0.1 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) GATase_3 PF07685.14 AID30800.1 - 1.6e-28 99.7 0.0 2e-28 99.3 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 AID30800.1 - 2.3e-13 50.3 0.0 3.5e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 AID30800.1 - 3.1e-12 46.7 0.2 1.5e-06 28.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.18 AID30800.1 - 0.21 11.0 0.0 0.47 9.9 0.0 1.6 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CobS PF02654.15 AID30801.1 - 4.4e-46 157.7 21.5 5e-46 157.5 21.5 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase PRA1 PF03208.19 AID30801.1 - 8.8 5.9 6.4 12 5.6 4.1 2.3 1 1 1 2 2 2 0 PRA1 family protein DBI_PRT PF02277.17 AID30802.1 - 1.2e-112 376.4 12.1 1.3e-112 376.2 12.1 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase GATase_3 PF07685.14 AID30803.1 - 2.2e-13 50.3 0.0 2.4e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Acyl_transf_3 PF01757.22 AID30805.1 - 5.2e-17 61.9 37.9 1.3e-16 60.6 37.9 1.7 1 1 0 1 1 1 1 Acyltransferase family Pectate_lyase_3 PF12708.7 AID30806.1 - 6.3e-15 55.6 14.8 8.9e-15 55.1 9.1 2.7 2 1 0 2 2 2 2 Pectate lyase superfamily protein End_N_terminal PF12218.8 AID30806.1 - 0.00062 19.4 0.1 0.0015 18.2 0.1 1.7 1 0 0 1 1 1 1 N terminal extension of bacteriophage endosialidase Phage_lysozyme2 PF18013.1 AID30809.1 - 8.6e-25 87.4 0.1 8.6e-25 87.4 0.1 2.6 4 0 0 4 4 4 1 Phage tail lysozyme DUF4231 PF14015.6 AID30810.1 - 0.059 13.8 0.1 0.1 13.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Head-tail_con PF12236.8 AID30818.1 - 4.2e-80 269.5 0.0 4.9e-80 269.3 0.0 1.0 1 0 0 1 1 1 1 Bacteriophage head to tail connecting protein PE PF00934.20 AID30821.1 - 0.076 13.3 1.7 0.19 12.0 1.0 1.9 2 0 0 2 2 2 0 PE family Potyvirid-P3 PF13608.6 AID30821.1 - 0.25 10.3 0.0 0.27 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein P3 of Potyviral polyprotein Toprim_3 PF13362.6 AID30826.1 - 6.9e-12 45.6 0.3 1.8e-11 44.3 0.0 1.8 2 0 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 AID30826.1 - 0.0016 18.8 0.1 0.0046 17.4 0.0 1.9 2 0 0 2 2 2 1 Toprim-like DUF3813 PF12758.7 AID30826.1 - 0.94 9.9 3.5 1.8 9.0 3.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3813) DUF577 PF04510.12 AID30827.1 - 0.097 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF577) NOB1_Zn_bind PF08772.11 AID30828.1 - 0.017 15.3 1.6 0.036 14.2 1.6 1.6 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_9 PF14369.6 AID30828.1 - 0.019 15.2 0.3 0.049 13.9 0.3 1.6 1 1 0 1 1 1 0 zinc-ribbon zf_UBZ PF18439.1 AID30828.1 - 0.22 11.1 2.5 3.5 7.3 0.4 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger M20_dimer PF07687.14 AID30829.1 - 0.086 12.8 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase dimerisation domain RlaP PF10127.9 AID30831.1 - 0.1 12.2 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 RNA repair pathway DNA polymerase beta family NIP_1 PF08995.10 AID30832.1 - 0.056 13.8 0.0 0.071 13.5 0.0 1.1 1 0 0 1 1 1 0 Necrosis inducing protein-1 HTH_3 PF01381.22 AID30833.1 - 3.6e-05 23.7 0.0 6e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_26 PF13443.6 AID30833.1 - 0.00036 20.9 0.0 0.00078 19.8 0.0 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_IclR PF09339.10 AID30833.1 - 0.0041 16.9 0.1 0.016 15.0 0.1 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 AID30833.1 - 0.0078 16.1 1.2 0.019 14.8 0.1 2.2 3 0 0 3 3 3 1 MarR family TetR_N PF00440.23 AID30833.1 - 0.023 14.5 0.0 7.3 6.5 0.0 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 AID30833.1 - 0.032 14.3 0.1 4 7.6 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 AID30833.1 - 0.042 13.7 0.3 0.58 10.0 0.1 2.7 3 0 0 3 3 3 0 Homeodomain-like domain HTH_31 PF13560.6 AID30833.1 - 0.064 13.6 0.3 0.58 10.5 0.0 2.3 1 1 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID30833.1 - 0.075 13.0 0.2 0.43 10.6 0.0 2.1 2 1 0 2 2 2 0 Crp-like helix-turn-helix domain LacI PF00356.21 AID30833.1 - 0.076 12.8 1.6 0.12 12.2 0.0 2.1 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family AbiEi_4 PF13338.6 AID30833.1 - 0.12 12.6 0.2 0.97 9.6 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin HTH_38 PF13936.6 AID30833.1 - 0.16 11.8 2.0 0.3 10.9 0.1 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain DUF3416 PF11896.8 AID30836.1 - 0.0041 17.4 0.0 0.0046 17.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3416) DUF2116 PF09889.9 AID30837.1 - 0.0059 16.6 0.2 0.011 15.6 0.0 1.5 1 1 1 2 2 2 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-tcix PF14952.6 AID30837.1 - 2.5 7.8 5.6 2.4 7.8 2.6 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Trp_oprn_chp PF09534.10 AID30838.1 - 0.058 13.2 1.1 0.065 13.0 1.1 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Phage_integrase PF00589.22 AID30840.1 - 0.0016 18.2 0.2 0.2 11.4 0.2 2.5 1 1 0 1 1 1 1 Phage integrase family RelA_SpoT PF04607.17 AID30842.1 - 5.9e-10 39.4 0.0 1.4e-09 38.3 0.0 1.6 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins eIF_4G1 PF12152.8 AID30842.1 - 0.012 15.8 0.2 0.041 14.0 0.1 1.9 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4G1 Csm2_III-A PF03750.13 AID30842.1 - 0.029 15.2 0.1 0.071 14.0 0.0 1.7 2 0 0 2 2 2 0 Csm2 Type III-A UPF0227 PF05728.12 AID30842.1 - 0.071 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) DUF35_N PF12172.8 AID30843.1 - 0.97 9.4 5.7 20 5.2 0.1 2.7 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PhzC-PhzF PF02567.16 AID30845.1 - 1.6e-51 175.5 0.0 1.8e-51 175.3 0.0 1.0 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein HlyD_D23 PF16576.5 AID30846.1 - 5.7e-24 84.5 5.6 1.1e-23 83.5 5.6 1.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID30846.1 - 9.4e-18 64.9 2.5 9.6e-14 52.0 0.1 2.7 2 0 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID30846.1 - 9.6e-15 54.1 10.3 2e-14 53.1 3.1 3.4 3 0 0 3 3 3 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID30846.1 - 0.00022 21.0 0.1 0.002 17.9 0.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme Peptidase_M23 PF01551.22 AID30846.1 - 0.0025 18.0 0.1 0.49 10.6 0.0 2.7 2 0 0 2 2 2 1 Peptidase family M23 PTS_EIIA_1 PF00358.20 AID30846.1 - 0.025 14.4 0.3 0.87 9.3 0.0 2.5 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OEP PF02321.18 AID30846.1 - 0.12 12.2 10.0 0.19 11.5 10.0 1.3 1 0 0 1 1 1 0 Outer membrane efflux protein HlyD PF00529.20 AID30846.1 - 0.23 11.4 12.0 7.3 6.5 12.0 2.5 1 1 0 1 1 1 0 HlyD membrane-fusion protein of T1SS ABC_tran PF00005.27 AID30847.1 - 2.2e-28 99.5 0.0 3e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30847.1 - 2e-06 27.8 0.1 0.011 15.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30847.1 - 7.9e-06 25.5 0.1 0.028 13.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30847.1 - 0.00056 19.6 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID30847.1 - 0.00074 19.8 0.6 0.13 12.6 0.1 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 AID30847.1 - 0.00093 19.0 0.1 0.18 11.5 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_30 PF13604.6 AID30847.1 - 0.0062 16.3 1.4 0.14 11.9 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID30847.1 - 0.0065 16.1 0.4 0.24 10.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID30847.1 - 0.028 14.8 0.3 0.056 13.8 0.3 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AID30847.1 - 0.029 14.3 0.0 0.068 13.1 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 AID30847.1 - 0.079 13.2 0.1 1.6 9.0 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 AID30847.1 - 0.098 13.1 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID30847.1 - 0.15 11.7 0.3 0.59 9.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID30847.1 - 0.18 11.9 0.1 1.1 9.4 0.0 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_33 PF13671.6 AID30847.1 - 0.23 11.6 5.6 4.8 7.3 5.6 2.4 1 1 0 1 1 1 0 AAA domain MacB_PCD PF12704.7 AID30848.1 - 4.6e-36 125.0 0.4 4.6e-36 125.0 0.4 3.2 3 1 0 4 4 4 1 MacB-like periplasmic core domain FtsX PF02687.21 AID30848.1 - 2.5e-10 40.7 5.5 2.5e-10 40.7 5.5 3.5 4 0 0 4 4 4 1 FtsX-like permease family DUF4134 PF13572.6 AID30848.1 - 1.7 8.9 7.2 0.39 11.0 0.2 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4134) HRG PF16954.5 AID30848.1 - 4.3 7.8 4.9 3.1 8.3 0.3 2.7 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene B12D PF06522.11 AID30849.1 - 0.027 14.3 0.3 0.12 12.2 0.0 2.0 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Exo_endo_phos PF03372.23 AID30851.1 - 2.6e-05 23.9 0.0 5.2e-05 22.9 0.0 1.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family BA14K PF07886.11 AID30852.1 - 2.3e-15 56.1 10.2 5.4e-15 54.9 10.2 1.7 1 0 0 1 1 1 1 BA14K-like protein IlvN PF07991.12 AID30853.1 - 4.2e-72 241.1 2.1 5.4e-72 240.7 2.1 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 AID30853.1 - 6.1e-66 221.1 0.2 8.5e-66 220.7 0.2 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain AdoHcyase_NAD PF00670.21 AID30853.1 - 3.5e-06 27.2 0.1 6.3e-06 26.3 0.1 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID30853.1 - 9.3e-06 25.1 0.0 1.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID30853.1 - 4.4e-05 24.0 0.5 8e-05 23.2 0.5 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Rossmann-like PF10727.9 AID30853.1 - 0.0036 17.2 0.4 0.0059 16.5 0.4 1.3 1 0 0 1 1 1 1 Rossmann-like domain NAD_binding_7 PF13241.6 AID30853.1 - 0.0053 17.2 0.1 0.013 15.9 0.1 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding Oxidored_nitro PF00148.19 AID30853.1 - 0.012 14.3 0.1 0.02 13.6 0.1 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase NAD_binding_2 PF03446.15 AID30853.1 - 0.017 15.3 0.3 0.038 14.2 0.3 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 AID30853.1 - 0.021 15.6 0.1 0.037 14.8 0.1 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.19 AID30853.1 - 0.047 14.4 0.1 0.11 13.1 0.1 1.7 1 0 0 1 1 1 0 CoA binding domain ApbA PF02558.16 AID30853.1 - 0.085 12.5 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA PDH PF02153.17 AID30853.1 - 0.096 11.7 0.0 0.15 11.0 0.0 1.3 1 0 0 1 1 1 0 Prephenate dehydrogenase TetR_C_7 PF14246.6 AID30854.1 - 3.5e-13 49.6 0.4 5.9e-13 48.9 0.4 1.4 1 1 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain TetR_N PF00440.23 AID30854.1 - 0.07 12.9 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family MarR_2 PF12802.7 AID30856.1 - 3.8e-13 49.1 0.1 8.9e-13 47.9 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID30856.1 - 8.9e-06 26.1 0.0 1.9e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 AID30856.1 - 0.00023 21.0 0.0 0.00063 19.6 0.0 1.7 2 0 0 2 2 2 1 MarR family PadR PF03551.14 AID30856.1 - 0.035 14.1 0.2 0.12 12.3 0.1 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family TrmB PF01978.19 AID30856.1 - 0.088 12.7 0.0 15 5.6 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB BLACT_WH PF17778.1 AID30856.1 - 0.11 12.5 0.0 0.27 11.3 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain DUF1967 PF09269.11 AID30856.1 - 0.18 11.7 0.1 2.8 8.0 0.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF1967) Rieske PF00355.26 AID30857.1 - 1.7e-12 47.1 0.0 1.9e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain GST_N_3 PF13417.6 AID30858.1 - 3.3e-19 69.0 0.0 6.5e-19 68.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID30858.1 - 2.3e-14 53.5 0.0 4.7e-14 52.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID30858.1 - 2.5e-12 46.9 0.0 4.6e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID30858.1 - 4.1e-08 33.3 0.0 8.1e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID30858.1 - 1.3e-07 31.5 0.9 2.7e-07 30.5 0.9 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID30858.1 - 0.00015 21.9 0.0 0.0003 20.9 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 AID30858.1 - 0.0041 17.3 0.0 0.0074 16.5 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin GST_N_4 PF17172.4 AID30858.1 - 0.0096 16.7 0.0 0.018 15.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain Tom37 PF10568.9 AID30858.1 - 0.038 14.3 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein CHAT PF12770.7 AID30859.1 - 8.3e-51 173.1 0.0 1.5e-50 172.2 0.0 1.4 1 0 0 1 1 1 1 CHAT domain TPR_12 PF13424.6 AID30859.1 - 8.2e-15 54.9 19.1 2.8e-10 40.4 0.6 4.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 AID30859.1 - 2.5e-06 27.1 6.0 0.054 13.4 0.1 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID30859.1 - 0.00073 19.3 3.8 0.021 14.7 0.4 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 AID30859.1 - 0.0014 18.6 2.7 0.012 15.7 0.2 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 AID30859.1 - 0.003 17.5 0.6 0.22 11.7 0.1 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 AID30859.1 - 1.3 9.4 5.4 10 6.6 0.3 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat FAD_binding_3 PF01494.19 AID30860.1 - 8e-27 94.4 0.2 1.1e-26 93.9 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID30860.1 - 1.1e-07 31.4 0.1 7.3e-07 28.7 0.1 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID30860.1 - 3.9e-06 27.0 0.0 1.6e-05 25.1 0.0 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID30860.1 - 7.8e-06 25.7 3.6 9.9e-05 22.1 0.1 2.7 1 1 2 3 3 3 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID30860.1 - 1.6e-05 24.0 0.5 0.069 12.0 0.1 2.4 2 0 0 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.14 AID30860.1 - 5e-05 22.2 0.0 0.00023 20.0 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 AID30860.1 - 0.0001 21.5 0.0 0.00042 19.5 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 AID30860.1 - 0.0003 20.1 0.0 0.00048 19.4 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 AID30860.1 - 0.0006 20.3 0.0 0.0016 19.0 0.0 1.7 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID30860.1 - 0.00084 18.8 0.0 0.0013 18.2 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 AID30860.1 - 0.0014 18.0 0.0 0.0022 17.4 0.0 1.3 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 AID30860.1 - 0.0025 17.1 0.0 0.0052 16.1 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID30860.1 - 0.0058 15.8 0.0 0.0081 15.3 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 AID30860.1 - 0.0096 15.0 0.7 0.083 11.9 0.0 2.3 2 1 0 2 2 2 1 Lycopene cyclase protein Gluconate_2-dh3 PF13618.6 AID30860.1 - 0.051 13.8 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 ApbA PF02558.16 AID30860.1 - 0.12 12.0 0.0 0.33 10.6 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA HxlR PF01638.17 AID30861.1 - 1.4e-27 95.4 0.0 1.7e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 AID30861.1 - 0.0011 18.9 0.0 0.0017 18.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 AID30861.1 - 0.0078 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIA_gamma_N PF02268.16 AID30861.1 - 0.11 12.6 0.0 3 7.9 0.0 2.2 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain NmrA PF05368.13 AID30862.1 - 1e-27 97.2 0.0 1.3e-27 96.9 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID30862.1 - 5.1e-21 75.4 0.4 1e-20 74.4 0.4 1.5 1 1 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 AID30862.1 - 9.2e-08 31.4 0.0 1.4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 AID30862.1 - 3.3e-05 23.5 0.1 5.3e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 AID30862.1 - 9.3e-05 21.7 0.2 0.029 13.5 0.0 2.4 2 1 0 2 2 2 2 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 AID30862.1 - 0.0001 22.6 0.0 0.0002 21.6 0.0 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 AID30862.1 - 0.00014 22.1 0.1 0.00029 21.1 0.1 1.6 1 0 0 1 1 1 1 TrkA-N domain KR PF08659.10 AID30862.1 - 0.00023 21.1 0.0 0.00052 20.0 0.0 1.7 1 1 0 1 1 1 1 KR domain F420_oxidored PF03807.17 AID30862.1 - 0.00072 20.1 0.3 0.0042 17.6 0.0 2.3 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent GDP_Man_Dehyd PF16363.5 AID30862.1 - 0.025 14.0 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID30862.1 - 0.059 12.5 0.0 0.086 12.0 0.0 1.3 1 0 0 1 1 1 0 Male sterility protein Epimerase PF01370.21 AID30863.1 - 6e-24 84.8 0.0 8.5e-24 84.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID30863.1 - 3.1e-17 62.5 0.0 4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 AID30863.1 - 1.5e-14 54.2 0.0 2.3e-14 53.5 0.0 1.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 AID30863.1 - 7.4e-13 48.8 0.0 5.1e-12 46.1 0.0 2.2 1 1 1 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 AID30863.1 - 3.7e-08 33.2 0.0 2.2e-05 24.1 0.0 2.4 2 1 0 2 2 2 2 NmrA-like family NAD_binding_4 PF07993.12 AID30863.1 - 1.6e-05 24.2 0.0 0.0004 19.6 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 AID30863.1 - 4.4e-05 22.8 0.0 0.0048 16.1 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein adh_short PF00106.25 AID30863.1 - 0.00033 20.2 0.1 0.0011 18.4 0.0 1.9 2 0 0 2 2 2 1 short chain dehydrogenase Dimerisation PF08100.11 AID30863.1 - 0.15 12.1 0.0 4.3 7.4 0.0 2.9 3 0 0 3 3 3 0 Dimerisation domain K_trans PF02705.16 AID30864.1 - 1.6e-31 109.5 0.0 1.8e-31 109.3 0.0 1.0 1 0 0 1 1 1 1 K+ potassium transporter CcmD PF04995.14 AID30864.1 - 0.015 15.3 0.2 0.029 14.4 0.2 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) K_trans PF02705.16 AID30865.1 - 1.2e-29 103.3 1.1 1.3e-29 103.1 1.1 1.0 1 0 0 1 1 1 1 K+ potassium transporter CcmD PF04995.14 AID30865.1 - 0.02 14.9 0.2 0.02 14.9 0.2 2.3 2 1 0 2 2 2 0 Heme exporter protein D (CcmD) S_2TMBeta PF18153.1 AID30865.1 - 0.59 9.9 2.3 0.35 10.6 0.5 1.5 1 1 1 2 2 2 0 SMODS-associating 2TM, beta-strand rich effector domain K_trans PF02705.16 AID30866.1 - 2.2e-47 161.8 7.2 8.2e-31 107.1 4.7 2.0 1 1 1 2 2 2 2 K+ potassium transporter FxsA PF04186.13 AID30866.1 - 0.015 15.4 8.1 0.52 10.4 0.1 2.9 2 1 1 3 3 3 0 FxsA cytoplasmic membrane protein DUF898 PF05987.13 AID30866.1 - 0.021 13.9 10.9 0.56 9.2 0.8 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF898) PetN PF03742.14 AID30866.1 - 0.023 14.6 16.5 0.63 10.0 4.3 2.6 2 0 0 2 2 2 0 PetN DUF3185 PF11381.8 AID30866.1 - 0.028 14.4 2.9 0.071 13.1 2.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) S_2TMBeta PF18153.1 AID30866.1 - 0.12 12.2 1.1 0.21 11.4 1.1 1.4 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain DUF1148 PF06618.11 AID30866.1 - 0.24 11.6 1.8 0.65 10.2 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1148) Hpre_diP_synt_I PF07456.11 AID30866.1 - 0.96 9.4 12.4 0.045 13.8 6.7 1.6 2 0 0 2 2 2 0 Heptaprenyl diphosphate synthase component I Saf_2TM PF18303.1 AID30866.1 - 4.5 6.8 15.1 7.1 6.2 0.3 3.1 2 1 1 3 3 3 0 SAVED-fused 2TM effector domain K_trans PF02705.16 AID30867.1 - 5.7e-37 127.4 1.1 6.7e-37 127.2 1.1 1.0 1 0 0 1 1 1 1 K+ potassium transporter YebO PF13974.6 AID30868.1 - 0.13 12.4 0.2 17 5.6 0.0 2.3 2 0 0 2 2 2 0 YebO-like protein ETC_C1_NDUFA4 PF04800.12 AID30868.1 - 0.13 12.5 0.0 14 6.0 0.0 2.2 1 1 1 2 2 2 0 ETC complex I subunit conserved region K_trans PF02705.16 AID30869.1 - 4.3e-189 629.5 20.5 5.3e-189 629.2 20.5 1.0 1 0 0 1 1 1 1 K+ potassium transporter CcmD PF04995.14 AID30869.1 - 0.087 12.9 0.2 0.087 12.9 0.2 3.1 4 0 0 4 4 4 0 Heme exporter protein D (CcmD) S_2TMBeta PF18153.1 AID30869.1 - 0.25 11.1 0.9 0.59 9.9 0.9 1.5 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain PdxJ PF03740.13 AID30870.1 - 4.4e-78 261.6 0.0 4.9e-78 261.5 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ SpoIIAA-like PF11964.8 AID30871.1 - 2.6e-11 44.4 0.1 3.1e-11 44.2 0.1 1.1 1 0 0 1 1 1 1 SpoIIAA-like PspB PF06667.12 AID30871.1 - 0.037 14.1 0.0 0.064 13.3 0.0 1.4 1 0 0 1 1 1 0 Phage shock protein B MMR_HSR1 PF01926.23 AID30871.1 - 0.21 11.7 0.1 0.28 11.3 0.1 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 AID30872.1 - 1.5e-27 96.6 0.0 2.3e-27 96.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 AID30872.1 - 1e-18 66.9 0.5 2.2e-18 65.8 0.5 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AID30872.1 - 1.4e-14 54.6 0.0 4.6e-14 53.0 0.0 1.8 2 0 0 2 2 2 1 AAA domain PIF1 PF05970.14 AID30872.1 - 1.4e-09 37.6 0.3 3.1e-08 33.2 0.1 2.5 2 1 0 2 2 2 1 PIF1-like helicase Viral_helicase1 PF01443.18 AID30872.1 - 8.4e-09 35.5 0.0 0.0036 17.1 0.0 2.9 2 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 AID30872.1 - 2.2e-05 24.9 0.1 6.7e-05 23.3 0.0 1.8 2 0 0 2 2 1 1 AAA ATPase domain TsaE PF02367.17 AID30872.1 - 0.0012 18.8 0.1 0.0054 16.7 0.1 1.9 1 1 1 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 AID30872.1 - 0.0015 18.7 0.4 1.8 8.7 0.0 2.7 2 1 0 2 2 2 2 AAA domain AAA_22 PF13401.6 AID30872.1 - 0.0022 18.3 0.0 0.0049 17.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID30872.1 - 0.0086 16.5 0.0 0.022 15.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 AID30872.1 - 0.013 14.7 0.0 0.02 14.1 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_18 PF13238.6 AID30872.1 - 0.013 16.0 0.1 0.038 14.5 0.0 1.8 2 0 0 2 2 1 0 AAA domain ATPase_2 PF01637.18 AID30872.1 - 0.019 14.9 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea UvrD_C PF13361.6 AID30872.1 - 0.028 13.8 0.0 0.043 13.2 0.0 1.3 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain AAA_11 PF13086.6 AID30872.1 - 0.03 14.1 0.1 0.74 9.6 0.1 2.3 1 1 0 2 2 2 0 AAA domain SH3_13 PF18335.1 AID30872.1 - 0.031 14.1 0.0 0.086 12.7 0.0 1.8 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain AAA_5 PF07728.14 AID30872.1 - 0.042 13.8 0.0 0.14 12.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 AID30872.1 - 0.084 12.3 0.0 0.28 10.6 0.0 1.8 2 0 0 2 2 2 0 PhoH-like protein TniB PF05621.11 AID30872.1 - 0.11 12.0 0.0 0.29 10.5 0.0 1.9 2 1 0 2 2 2 0 Bacterial TniB protein AAA_13 PF13166.6 AID30872.1 - 0.2 10.3 0.0 0.29 9.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain NHase_beta PF02211.15 AID30873.1 - 8.7e-12 45.5 0.1 1e-11 45.3 0.1 1.1 1 0 0 1 1 1 1 Nitrile hydratase beta subunit NHase_beta PF02211.15 AID30874.1 - 8.9e-84 280.9 0.0 1e-83 280.7 0.0 1.0 1 0 0 1 1 1 1 Nitrile hydratase beta subunit NHase_alpha PF02979.16 AID30875.1 - 7.4e-82 273.1 0.0 8.4e-82 272.9 0.0 1.0 1 0 0 1 1 1 1 Nitrile hydratase, alpha chain ACR_tran PF00873.19 AID30876.1 - 1.4e-290 966.5 32.7 1.7e-290 966.3 32.7 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID30876.1 - 9.2e-09 35.0 32.7 0.00016 21.1 17.9 2.5 2 0 0 2 2 2 2 Protein export membrane protein MMPL PF03176.15 AID30876.1 - 1.2e-05 24.4 16.6 1.2e-05 24.4 16.6 3.1 2 1 0 2 2 2 2 MMPL family DUF2721 PF11026.8 AID30876.1 - 0.0032 17.3 2.4 0.0032 17.3 2.4 3.6 4 0 0 4 4 4 1 Protein of unknown function (DUF2721) Biotin_lipoyl_2 PF13533.6 AID30877.1 - 5.4e-17 61.4 7.6 3.4e-14 52.4 2.8 3.6 3 0 0 3 3 3 2 Biotin-lipoyl like HlyD_D23 PF16576.5 AID30877.1 - 1.4e-14 53.9 0.8 2.7e-14 52.9 0.8 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID30877.1 - 5.2e-12 46.4 3.8 4e-07 30.7 0.1 3.2 3 1 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 AID30877.1 - 0.00059 19.6 0.7 0.077 12.8 0.1 3.1 2 1 0 2 2 2 1 Biotin-requiring enzyme LysE PF01810.18 AID30878.1 - 1.6e-18 66.9 14.3 2.1e-18 66.5 14.3 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 AID30878.1 - 0.39 10.4 12.3 1.6 8.4 11.2 2.4 1 1 0 1 1 1 0 Integral membrane protein TerC family PsbN PF02468.15 AID30878.1 - 0.61 10.0 11.3 0.49 10.3 0.6 3.6 4 0 0 4 4 4 0 Photosystem II reaction centre N protein (psbN) ALS_ss_C PF10369.9 AID30879.1 - 4.1e-25 87.8 0.1 1.1e-24 86.5 0.1 1.7 1 0 0 1 1 1 1 Small subunit of acetolactate synthase ACT PF01842.25 AID30879.1 - 2.5e-12 46.4 0.1 5.1e-12 45.3 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 AID30879.1 - 2.9e-12 46.2 0.1 5.8e-12 45.3 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 AID30879.1 - 0.00041 20.9 0.1 0.00068 20.2 0.1 1.3 1 0 0 1 1 1 1 ACT domain TPP_enzyme_C PF02775.21 AID30880.1 - 1.1e-51 174.7 0.1 1.4e-51 174.3 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 AID30881.1 - 1.4e-57 194.1 0.1 2.1e-57 193.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 AID30881.1 - 3.3e-45 153.2 0.0 5.8e-45 152.4 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 AID30881.1 - 0.1 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DOMON PF03351.17 AID30881.1 - 0.24 11.6 0.2 1.8 8.8 0.0 2.1 2 0 0 2 2 2 0 DOMON domain Pyr_redox_3 PF13738.6 AID30882.1 - 6.7e-25 88.0 0.0 2e-23 83.2 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 AID30882.1 - 2.6e-19 69.1 0.0 1.1e-15 57.0 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 AID30882.1 - 3.1e-19 69.3 0.0 6.2e-15 55.2 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 AID30882.1 - 5.6e-07 29.0 0.0 3.9e-06 26.2 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 AID30882.1 - 6.6e-06 26.6 0.5 0.027 15.0 0.0 3.0 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID30882.1 - 6.3e-05 22.4 0.4 0.0061 15.8 0.1 2.9 3 0 0 3 3 3 1 FAD binding domain SnoaL_2 PF12680.7 AID30882.1 - 6.4e-05 23.5 0.0 0.00016 22.2 0.0 1.7 1 0 0 1 1 1 1 SnoaL-like domain FAD_binding_2 PF00890.24 AID30882.1 - 0.0024 17.0 0.6 0.11 11.5 0.6 2.3 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 AID30882.1 - 0.0041 17.3 0.1 0.031 14.5 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 AID30882.1 - 0.0051 17.1 0.0 1.1 9.6 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.6 AID30882.1 - 0.016 15.7 0.0 0.057 13.9 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding F420_oxidored PF03807.17 AID30882.1 - 0.039 14.5 0.1 17 6.1 0.0 2.5 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 AID30882.1 - 0.041 13.5 0.1 1.4 8.6 0.0 2.3 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Oxidored_nitro PF00148.19 AID30882.1 - 0.089 11.5 0.0 0.15 10.7 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase NAD_binding_9 PF13454.6 AID30882.1 - 0.15 12.1 0.1 45 4.0 0.1 3.2 3 0 0 3 3 3 0 FAD-NAD(P)-binding HD PF01966.22 AID30883.1 - 1.1e-06 28.8 0.0 1.4e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 HD domain TauD PF02668.16 AID30884.1 - 6.1e-39 134.4 0.0 8.5e-39 134.0 0.0 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family DUF971 PF06155.12 AID30884.1 - 2.5e-05 24.8 0.0 5e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF971) LysR_substrate PF03466.20 AID30885.1 - 1.1e-19 70.7 7.4 1.1e-19 70.7 7.4 1.7 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID30885.1 - 3e-18 65.5 3.4 7.9e-18 64.2 3.4 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_5 PF01022.20 AID30885.1 - 0.0059 16.5 0.0 0.01 15.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID30885.1 - 0.012 15.5 0.1 0.03 14.2 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 AID30885.1 - 0.013 15.6 0.6 0.029 14.4 0.2 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 AID30885.1 - 0.11 12.1 0.2 0.21 11.2 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding CARD PF00619.21 AID30887.1 - 0.063 13.3 0.5 0.074 13.1 0.5 1.2 1 0 0 1 1 1 0 Caspase recruitment domain HTH_3 PF01381.22 AID30888.1 - 1.4e-12 47.5 0.0 2e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID30888.1 - 9.2e-09 35.2 0.0 1.4e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 AID30888.1 - 9.8e-09 35.4 1.5 2.2e-08 34.3 1.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 AID30888.1 - 0.00015 22.1 0.0 0.00027 21.3 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 AID30888.1 - 0.00038 20.2 0.1 0.001 18.9 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 AID30888.1 - 0.0068 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 AID30888.1 - 0.0094 15.6 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 1 Cupin domain HTH_IclR PF09339.10 AID30888.1 - 0.016 15.0 0.3 0.65 9.8 0.0 2.7 1 1 0 2 2 2 0 IclR helix-turn-helix domain TetR_N PF00440.23 AID30888.1 - 0.06 13.1 0.3 0.19 11.5 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.16 AID30888.1 - 0.081 12.5 0.2 0.37 10.3 0.1 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 Phage_CI_repr PF07022.13 AID30888.1 - 0.15 12.2 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DUF87 PF01935.17 AID30889.1 - 4.7e-39 134.8 0.0 6.5e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 AID30889.1 - 4.4e-05 22.9 0.0 0.04 13.3 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 AID30889.1 - 4.7e-05 22.5 0.0 8.3e-05 21.7 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain HAS-barrel PF09378.10 AID30889.1 - 0.00035 20.7 0.2 0.00072 19.7 0.2 1.6 1 0 0 1 1 1 1 HAS barrel domain AAA_10 PF12846.7 AID30889.1 - 0.00043 19.3 0.0 0.0028 16.6 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain AAA_16 PF13191.6 AID30889.1 - 0.0053 17.1 0.0 0.099 13.0 0.0 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID30889.1 - 0.026 14.8 0.0 0.21 11.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID30889.1 - 0.032 14.7 0.0 0.079 13.5 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 AID30889.1 - 0.045 13.5 0.0 0.089 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 AID30889.1 - 0.053 13.3 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase MMR_HSR1 PF01926.23 AID30889.1 - 0.096 12.8 0.0 0.29 11.2 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase GGDEF PF00990.21 AID30890.1 - 3.2e-48 163.5 0.2 4.2e-48 163.1 0.2 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 AID30890.1 - 0.01 16.1 0.1 0.034 14.4 0.0 1.7 1 1 0 1 1 1 0 GGDEF-like domain CTP_transf_3 PF02348.19 AID30890.1 - 0.039 13.9 0.0 0.056 13.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase DUF512 PF04459.12 AID30890.1 - 0.04 13.2 0.0 0.27 10.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF512) RSN1_TM PF13967.6 AID30890.1 - 0.26 11.1 1.4 0.45 10.2 0.1 1.9 1 1 1 2 2 2 0 Late exocytosis, associated with Golgi transport IPPT PF01715.17 AID30891.1 - 7.9e-60 202.5 0.0 1e-59 202.1 0.0 1.0 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 AID30891.1 - 6.3e-07 29.0 0.1 1.6e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 Isopentenyl transferase AAA_33 PF13671.6 AID30891.1 - 3.2e-05 24.1 0.1 0.0018 18.4 0.0 2.5 2 1 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 AID30891.1 - 0.0011 18.8 0.4 0.0049 16.6 0.0 2.0 2 0 0 2 2 2 1 Cytidylate kinase AAA_16 PF13191.6 AID30891.1 - 0.011 16.2 1.2 0.044 14.2 1.2 2.2 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.12 AID30891.1 - 0.012 14.8 0.1 0.022 14.0 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.6 AID30891.1 - 0.015 15.8 0.0 0.04 14.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 AID30891.1 - 0.04 13.1 0.1 0.064 12.5 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_25 PF13481.6 AID30891.1 - 0.041 13.5 1.1 0.26 10.8 0.1 2.2 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 AID30891.1 - 0.14 11.2 0.1 0.53 9.3 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein HAD PF12710.7 AID30892.1 - 3.3e-16 60.2 0.6 5.1e-16 59.6 0.6 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID30892.1 - 8.2e-10 38.8 0.2 2.6e-09 37.2 0.1 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID30892.1 - 5.1e-09 36.7 1.8 9.6e-09 35.8 1.8 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 AID30892.1 - 0.0011 18.6 0.3 0.34 10.4 0.0 2.7 3 0 0 3 3 3 2 Sucrose-6F-phosphate phosphohydrolase DUF4392 PF14336.6 AID30892.1 - 0.032 13.7 0.3 0.09 12.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4392) Acetyltransf_3 PF13302.7 AID30893.1 - 2e-34 119.2 0.3 2.5e-34 118.9 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID30893.1 - 1.5e-09 38.1 0.1 2e-09 37.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 AID30893.1 - 0.0011 18.7 0.1 0.0017 18.0 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Trypsin_2 PF13365.6 AID30894.1 - 4e-33 115.4 3.2 9.8e-33 114.2 3.2 1.7 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 AID30894.1 - 9e-21 74.0 10.7 2e-14 53.7 1.0 3.2 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 AID30894.1 - 2.8e-17 62.8 3.7 2.5e-09 37.4 0.4 3.2 2 0 0 2 2 2 2 PDZ domain Trypsin PF00089.26 AID30894.1 - 4.7e-16 59.3 0.8 9.8e-16 58.2 0.8 1.5 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 AID30894.1 - 1.3e-10 41.0 12.7 1.8e-06 27.7 0.9 3.5 4 0 0 4 4 4 2 PDZ domain Tricorn_PDZ PF14685.6 AID30894.1 - 0.02 14.9 6.5 0.35 10.9 0.1 3.3 3 0 0 3 3 3 0 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 AID30894.1 - 0.026 13.2 0.4 0.15 10.7 0.4 1.9 2 0 0 2 2 2 0 Peptidase S46 PDZ_1 PF12812.7 AID30894.1 - 0.028 14.4 0.0 0.15 12.1 0.0 2.1 2 0 0 2 2 2 0 PDZ-like domain Peptidase_S29 PF02907.15 AID30894.1 - 0.055 13.2 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease DUF2530 PF10745.9 AID30894.1 - 0.24 11.7 2.6 0.4 10.9 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2530) DUF4179 PF13786.6 AID30894.1 - 2.3 8.8 5.1 31 5.1 5.1 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) DUF2065 PF09838.9 AID30895.1 - 8.2e-18 64.2 8.2 9e-18 64.0 8.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2065) Band_7 PF01145.25 AID30896.1 - 1.2e-21 77.5 7.6 3.3e-21 76.1 7.6 1.7 1 1 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 AID30896.1 - 0.021 14.6 0.1 1.5 8.5 0.0 2.2 2 0 0 2 2 2 0 SPFH domain-Band 7 family Band_7 PF01145.25 AID30897.1 - 7e-27 94.6 1.2 1.1e-26 93.9 1.2 1.4 1 1 0 1 1 1 1 SPFH domain / Band 7 family ATP-synt_B PF00430.18 AID30897.1 - 0.011 15.8 7.1 0.011 15.8 7.1 1.6 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) PHB_depo_C PF06850.11 AID30897.1 - 0.025 14.0 0.1 0.039 13.4 0.1 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus DivIVA PF05103.13 AID30897.1 - 0.039 14.0 3.1 0.07 13.2 3.1 1.4 1 0 0 1 1 1 0 DivIVA protein DUF603 PF04645.12 AID30897.1 - 0.057 13.1 0.1 0.085 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF603 V-ATPase_G PF03179.15 AID30897.1 - 0.14 12.7 7.7 0.71 10.4 7.7 2.0 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit CSN5_C PF18323.1 AID30897.1 - 0.17 12.9 0.7 0.33 11.9 0.7 1.5 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF883 PF05957.13 AID30897.1 - 2.8 8.6 8.9 0.88 10.2 4.0 2.5 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF883) V-ATPase_G_2 PF16999.5 AID30897.1 - 4.3 7.8 12.8 2.9 8.4 8.4 2.4 2 1 1 3 3 3 0 Vacuolar (H+)-ATPase G subunit DHFR_1 PF00186.19 AID30898.1 - 2.7e-55 186.5 0.0 3.2e-55 186.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase DUF4424 PF14415.6 AID30899.1 - 5.1e-110 367.5 0.0 5.8e-110 367.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4424) TP_methylase PF00590.20 AID30900.1 - 1.5e-29 103.5 0.0 1.8e-29 103.2 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases FGGY_N PF00370.21 AID30901.1 - 3.2e-56 190.6 0.0 5.4e-56 189.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 AID30901.1 - 7e-26 91.2 0.1 1.2e-25 90.4 0.1 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 AID30901.1 - 0.00041 19.9 0.0 0.067 12.7 0.0 2.4 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family HSP70 PF00012.20 AID30901.1 - 0.0065 14.7 0.0 0.01 14.1 0.0 1.2 1 0 0 1 1 1 1 Hsp70 protein HlyD_D4 PF16572.5 AID30901.1 - 0.063 13.1 0.3 0.32 10.9 0.1 2.2 2 0 0 2 2 2 0 Long alpha hairpin domain of cation efflux system protein, CusB DeoRC PF00455.22 AID30903.1 - 2.1e-38 131.8 1.0 3.1e-38 131.2 1.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID30903.1 - 3e-14 52.5 1.7 3.7e-14 52.2 0.6 1.8 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID30903.1 - 1.1e-05 25.3 0.1 3.5e-05 23.7 0.0 1.9 2 0 0 2 2 2 1 HTH domain GntR PF00392.21 AID30903.1 - 0.00031 20.3 0.1 0.0007 19.2 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 AID30903.1 - 0.00049 20.0 0.0 0.0016 18.3 0.0 1.9 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 AID30903.1 - 0.0044 17.1 0.2 0.0093 16.1 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID30903.1 - 0.0065 16.3 0.0 0.013 15.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family AbiEi_4 PF13338.6 AID30903.1 - 0.0075 16.4 0.8 0.11 12.6 0.0 3.2 4 1 1 5 5 4 1 Transcriptional regulator, AbiEi antitoxin SpoIIID PF12116.8 AID30903.1 - 0.008 16.3 0.1 0.021 14.9 0.1 1.7 1 0 0 1 1 1 1 Stage III sporulation protein D HTH_IclR PF09339.10 AID30903.1 - 0.0086 15.9 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF977 PF06163.11 AID30903.1 - 0.013 15.5 0.4 0.12 12.4 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) HTH_Crp_2 PF13545.6 AID30903.1 - 0.027 14.4 0.0 0.09 12.8 0.0 1.9 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain FeoC PF09012.10 AID30903.1 - 0.049 13.7 0.0 0.096 12.8 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator MarR_2 PF12802.7 AID30903.1 - 0.074 13.0 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 MarR family FaeA PF04703.12 AID30903.1 - 0.11 12.9 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein TrmB PF01978.19 AID30903.1 - 0.11 12.3 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID30903.1 - 0.13 11.9 0.0 0.48 10.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 AID30903.1 - 0.17 11.9 0.0 0.47 10.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DAO PF01266.24 AID30904.1 - 5.6e-39 134.7 0.1 7e-39 134.4 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 AID30904.1 - 1e-19 70.6 0.0 2e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_3 PF01494.19 AID30904.1 - 0.0063 15.8 0.1 0.02 14.2 0.1 1.8 2 0 0 2 2 2 1 FAD binding domain DUF2291 PF10054.9 AID30905.1 - 9.9e-52 175.5 3.9 1.1e-51 175.3 3.9 1.0 1 0 0 1 1 1 1 Predicted periplasmic lipoprotein (DUF2291) ABC_tran PF00005.27 AID30906.1 - 3.4e-54 183.1 0.3 9e-31 107.2 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID30906.1 - 6.7e-12 45.8 3.5 0.0022 17.9 0.3 3.2 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID30906.1 - 1.3e-06 29.1 0.1 0.00049 20.6 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID30906.1 - 8.6e-05 22.2 0.6 0.00067 19.3 0.4 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID30906.1 - 0.00011 22.2 0.2 0.02 14.8 0.1 2.5 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID30906.1 - 0.00014 22.3 3.0 0.02 15.3 0.1 2.6 2 1 0 2 2 2 2 AAA ATPase domain MukB PF04310.12 AID30906.1 - 0.00027 20.8 0.1 0.00046 20.1 0.1 1.4 1 0 0 1 1 1 1 MukB N-terminal TsaE PF02367.17 AID30906.1 - 0.00065 19.7 0.1 1.7 8.6 0.1 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 AID30906.1 - 0.0029 17.9 4.7 0.6 10.4 2.7 3.3 2 1 0 2 2 2 1 AAA domain APS_kinase PF01583.20 AID30906.1 - 0.0035 17.2 0.5 0.9 9.4 0.0 2.7 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_30 PF13604.6 AID30906.1 - 0.0046 16.7 1.0 0.46 10.2 0.8 2.8 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 AID30906.1 - 0.012 14.9 0.1 0.97 8.7 0.1 2.4 2 0 0 2 2 2 0 Zeta toxin AAA PF00004.29 AID30906.1 - 0.019 15.4 0.8 2.5 8.5 0.2 3.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID30906.1 - 0.037 13.5 0.5 1.7 8.0 0.8 2.8 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID30906.1 - 0.04 13.6 0.1 0.057 13.1 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 AID30906.1 - 0.06 12.0 0.2 0.13 10.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 AID30906.1 - 0.11 12.1 0.0 0.34 10.4 0.0 1.8 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain ATPase_2 PF01637.18 AID30906.1 - 0.11 12.4 0.4 6.9 6.5 0.0 2.6 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea DLIC PF05783.11 AID30906.1 - 0.16 10.7 0.1 0.5 9.1 0.0 1.7 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) AAA_25 PF13481.6 AID30906.1 - 0.2 11.2 1.4 0.96 9.0 0.1 2.6 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 AID30906.1 - 0.48 10.0 1.8 9 5.8 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 AID30906.1 - 0.85 9.2 4.0 2.6 7.6 0.0 2.7 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain ABC_ATPase PF09818.9 AID30906.1 - 5.4 5.7 8.9 11 4.7 0.9 3.4 3 1 0 3 3 3 0 Predicted ATPase of the ABC class BPD_transp_2 PF02653.16 AID30907.1 - 9.2e-42 143.0 28.3 1.6e-41 142.2 28.3 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 AID30908.1 - 1.9e-51 175.2 14.4 2.2e-51 174.9 14.4 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID30908.1 - 4.5e-14 52.5 1.0 5.5e-14 52.2 1.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID30908.1 - 5.4e-05 23.6 0.0 9.8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Methyltransf_11 PF08241.12 AID30909.1 - 0.0018 18.9 0.0 0.0033 18.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID30909.1 - 0.025 14.4 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 AID30909.1 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain HTH_1 PF00126.27 AID30910.1 - 5.7e-13 48.6 1.2 8.8e-13 48.0 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family ABC_tran PF00005.27 AID30911.1 - 1.9e-31 109.4 0.0 3.1e-31 108.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 AID30911.1 - 7.2e-19 67.9 0.9 2.9e-15 56.3 0.2 2.4 2 0 0 2 2 2 2 TOBE domain AAA_21 PF13304.6 AID30911.1 - 3.3e-06 27.1 0.0 0.018 14.9 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30911.1 - 2.3e-05 23.9 0.0 0.029 13.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID30911.1 - 9.9e-05 22.0 0.0 0.00024 20.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID30911.1 - 0.00022 21.7 0.0 0.00038 20.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID30911.1 - 0.00087 19.2 0.0 0.0017 18.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID30911.1 - 0.0011 19.6 0.0 0.0016 19.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID30911.1 - 0.0015 18.9 0.0 0.017 15.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 AID30911.1 - 0.0019 18.6 0.0 0.0042 17.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 AID30911.1 - 0.0025 17.6 0.0 0.0059 16.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain YhdX PF17444.2 AID30911.1 - 0.011 15.5 0.1 0.032 14.1 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized YhdX-like TniB PF05621.11 AID30911.1 - 0.018 14.5 0.0 0.9 8.9 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein eIF-1a PF01176.19 AID30911.1 - 0.025 14.4 0.3 8.9 6.2 0.0 3.0 3 0 0 3 3 3 0 Translation initiation factor 1A / IF-1 AAA_25 PF13481.6 AID30911.1 - 0.053 13.1 0.0 0.24 11.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 AID30911.1 - 0.076 13.3 0.1 1.3 9.3 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_24 PF13479.6 AID30911.1 - 0.087 12.5 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID30911.1 - 0.089 12.4 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 AID30911.1 - 0.13 12.4 0.1 0.28 11.3 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.12 AID30911.1 - 0.17 11.8 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 AID30911.1 - 0.24 11.3 0.0 0.38 10.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea BPD_transp_1 PF00528.22 AID30912.1 - 8.9e-19 67.9 13.6 1.2e-18 67.5 13.6 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 AID30913.1 - 4.8e-41 141.0 4.3 5.8e-41 140.7 4.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID30913.1 - 3.9e-12 46.7 6.8 8.8e-12 45.6 6.8 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein TOBE PF03459.17 AID30914.1 - 8.6e-19 67.6 0.7 9.4e-19 67.5 0.7 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 AID30914.1 - 0.047 13.9 0.1 0.052 13.7 0.1 1.1 1 0 0 1 1 1 0 TOBE domain S1 PF00575.23 AID30914.1 - 0.075 13.4 0.4 0.086 13.2 0.4 1.2 1 0 0 1 1 1 0 S1 RNA binding domain Thymidylat_synt PF00303.19 AID30915.1 - 2.6e-123 410.4 0.0 2.9e-123 410.2 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase TPR_2 PF07719.17 AID30915.1 - 0.12 12.5 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2853 PF11015.8 AID30916.1 - 2.5e-38 130.8 1.0 2.7e-38 130.7 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2853) NLRC4_HD PF17889.1 AID30916.1 - 0.12 12.7 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 NLRC4 helical domain AAA_28 PF13521.6 AID30917.1 - 4.4e-40 137.6 0.0 5e-40 137.4 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID30917.1 - 0.00021 21.1 0.1 0.00035 20.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID30917.1 - 0.00079 20.0 0.0 0.0012 19.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 AID30917.1 - 0.001 19.4 0.1 0.0034 17.7 0.1 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID30917.1 - 0.0026 18.2 0.0 0.0066 16.9 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 AID30917.1 - 0.0028 18.2 0.0 0.0043 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID30917.1 - 0.0068 16.1 0.1 0.011 15.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 AID30917.1 - 0.015 14.6 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_21 PF13304.6 AID30917.1 - 0.017 15.0 0.1 0.023 14.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 AID30917.1 - 0.021 14.5 0.2 0.029 14.0 0.2 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.6 AID30917.1 - 0.024 15.1 0.1 0.04 14.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID30917.1 - 0.025 14.9 0.1 0.042 14.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID30917.1 - 0.035 14.0 0.2 0.052 13.5 0.2 1.2 1 0 0 1 1 1 0 NTPase Ploopntkinase3 PF18751.1 AID30917.1 - 0.063 13.2 0.1 0.11 12.4 0.0 1.4 1 1 0 1 1 1 0 P-loop Nucleotide Kinase3 T2SSE PF00437.20 AID30917.1 - 0.071 12.2 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_tran PF00005.27 AID30917.1 - 0.076 13.5 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter Viral_helicase1 PF01443.18 AID30917.1 - 0.082 12.6 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 AID30917.1 - 0.11 12.6 0.8 0.21 11.7 0.7 1.9 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID30917.1 - 0.12 12.3 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 AID30917.1 - 0.17 11.6 0.0 0.34 10.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID30917.1 - 0.21 12.0 0.2 0.34 11.3 0.2 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.10 AID30917.1 - 0.25 10.8 0.0 0.34 10.3 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF2075 PF09848.9 AID30917.1 - 0.31 10.2 0.2 0.43 9.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MFS_1 PF07690.16 AID30918.1 - 1e-40 139.7 52.6 1.5e-40 139.2 52.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID30918.1 - 7.7e-07 28.3 11.6 7.7e-07 28.3 11.6 3.2 1 1 2 3 3 3 3 Sugar (and other) transporter TetR_N PF00440.23 AID30919.1 - 2.7e-14 52.7 0.1 1.8e-12 46.9 0.1 2.5 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family TetR_C_7 PF14246.6 AID30919.1 - 1.8e-06 28.0 0.0 3.3e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain HTH_23 PF13384.6 AID30919.1 - 0.0048 16.7 0.0 0.015 15.1 0.0 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 AID30919.1 - 0.032 14.4 0.2 0.11 12.7 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_7 PF02796.15 AID30919.1 - 0.039 14.0 0.0 0.075 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_22 PF13309.6 AID30919.1 - 0.081 13.0 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_29 PF13551.6 AID30919.1 - 0.12 12.5 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_11 PF08279.12 AID30919.1 - 0.16 11.9 0.0 0.38 10.7 0.0 1.6 1 0 0 1 1 1 0 HTH domain HTH_Tnp_1_2 PF13022.6 AID30919.1 - 0.18 12.0 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase SspB PF04386.13 AID30921.1 - 3.2e-53 179.9 0.1 3.6e-53 179.7 0.1 1.0 1 0 0 1 1 1 1 Stringent starvation protein B DUF4169 PF13770.6 AID30922.1 - 1.1e-19 70.4 12.2 1.2e-19 70.3 12.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4169) RHH_4 PF13467.6 AID30923.1 - 5.8e-23 80.6 0.1 6.5e-23 80.4 0.1 1.0 1 0 0 1 1 1 1 Ribbon-helix-helix domain Voltage_CLC PF00654.20 AID30924.1 - 3.2e-43 148.3 30.3 3.2e-43 148.3 30.3 1.8 2 0 0 2 2 2 1 Voltage gated chloride channel CBS PF00571.28 AID30924.1 - 7.6e-11 42.3 0.0 2.2e-05 24.8 0.0 2.5 2 0 0 2 2 2 2 CBS domain MarR_2 PF12802.7 AID30926.1 - 2e-15 56.4 0.5 5.2e-15 55.1 0.5 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID30926.1 - 2e-09 37.8 0.1 3.7e-09 36.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 AID30926.1 - 2.5e-07 30.5 0.0 8.1e-07 28.9 0.0 1.9 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.19 AID30926.1 - 6.7e-05 23.0 0.0 0.0002 21.5 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 AID30926.1 - 0.001 19.4 0.0 0.003 17.9 0.0 1.7 2 0 0 2 2 2 1 Transcriptional regulator TrmB PF01978.19 AID30926.1 - 0.0011 18.8 0.0 0.0054 16.6 0.0 2.0 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 AID30926.1 - 0.0071 16.4 0.1 0.0071 16.4 0.1 2.3 2 2 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID30926.1 - 0.019 14.9 0.4 0.099 12.6 0.3 2.3 2 1 1 3 3 3 0 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 AID30926.1 - 0.031 14.1 0.0 0.085 12.6 0.0 1.7 1 0 0 1 1 1 0 LexA DNA binding domain Dimerisation PF08100.11 AID30926.1 - 0.059 13.4 0.2 0.32 11.1 0.0 2.2 2 0 0 2 2 2 0 Dimerisation domain FtsK_gamma PF09397.10 AID30926.1 - 0.066 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Ftsk gamma domain TFIIE_alpha PF02002.17 AID30926.1 - 0.076 12.9 0.2 0.18 11.7 0.1 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit Sigma70_r2 PF04542.14 AID30928.1 - 2e-16 59.5 0.0 5.4e-16 58.1 0.0 1.8 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID30928.1 - 7.7e-10 38.3 0.3 2.4e-09 36.7 0.0 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 SnoaL_2 PF12680.7 AID30928.1 - 1.2e-05 25.8 0.8 8.2e-05 23.2 0.8 2.5 1 1 0 1 1 1 1 SnoaL-like domain Sigma70_r4 PF04545.16 AID30928.1 - 0.0004 19.8 0.0 0.0009 18.7 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID30928.1 - 0.0082 16.0 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 ECF sigma factor SnoaL_3 PF13474.6 AID30928.1 - 0.014 15.7 0.0 0.026 14.8 0.0 1.4 1 0 0 1 1 1 0 SnoaL-like domain DUF3887 PF13026.6 AID30928.1 - 0.022 15.6 0.0 0.038 14.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3887) SnoaL PF07366.12 AID30928.1 - 0.029 14.2 0.0 0.19 11.5 0.0 2.1 2 0 0 2 2 2 0 SnoaL-like polyketide cyclase AsmA_2 PF13502.6 AID30929.1 - 4.8e-22 78.6 29.2 1e-18 67.7 4.7 6.6 5 2 0 5 5 5 3 AsmA-like C-terminal region AsmA PF05170.14 AID30929.1 - 1.7e-16 60.2 3.7 4.3e-10 39.0 0.0 3.8 4 0 0 4 4 4 3 AsmA family DUF3971 PF13116.6 AID30929.1 - 0.23 11.0 4.5 4.4 6.8 0.0 4.4 5 1 0 5 5 5 0 Protein of unknown function Fibrinogen_BP PF08017.11 AID30929.1 - 4.1 5.7 15.4 6.1 5.2 15.4 1.1 1 0 0 1 1 1 0 Fibrinogen binding protein Dyp_perox PF04261.12 AID30930.1 - 1.2e-97 326.9 0.0 1.4e-97 326.6 0.0 1.1 1 0 0 1 1 1 1 Dyp-type peroxidase family FAD-oxidase_C PF02913.19 AID30932.1 - 2.8e-67 227.0 0.0 5.5e-67 226.0 0.0 1.5 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 AID30932.1 - 1.6e-40 138.1 0.4 3.2e-40 137.1 0.4 1.5 1 0 0 1 1 1 1 FAD binding domain 4HBT_2 PF13279.6 AID30933.1 - 7.2e-19 68.5 0.2 9.1e-19 68.2 0.2 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 AID30933.1 - 0.073 12.3 0.6 0.13 11.5 0.6 1.4 1 1 0 1 1 1 0 Acyl-ACP thioesterase HTH_24 PF13412.6 AID30935.1 - 2.1e-16 59.2 0.2 4.3e-16 58.2 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID30935.1 - 3.5e-16 58.8 2.4 6.9e-16 57.8 2.4 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 AID30935.1 - 1.5e-12 47.3 0.1 4.3e-12 45.8 0.0 1.7 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain MarR PF01047.22 AID30935.1 - 1.5e-05 24.9 0.0 2.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 AID30935.1 - 1.8e-05 24.9 0.1 3e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 AID30935.1 - 2.5e-05 24.1 0.2 9.3e-05 22.2 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID30935.1 - 4.3e-05 23.5 0.1 8e-05 22.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID30935.1 - 0.00012 21.8 0.1 0.00025 20.8 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_5 PF01022.20 AID30935.1 - 0.00031 20.5 0.0 0.00058 19.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 AID30935.1 - 0.00086 19.2 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 AID30935.1 - 0.00091 19.0 0.0 0.0019 18.0 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_11 PF08279.12 AID30935.1 - 0.0037 17.2 0.1 0.0069 16.3 0.1 1.5 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 AID30935.1 - 0.0041 17.0 0.0 0.0068 16.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PheRS_DBD1 PF18552.1 AID30935.1 - 0.0043 16.8 0.0 0.0081 15.9 0.0 1.4 1 0 0 1 1 1 1 PheRS DNA binding domain 1 HTH_27 PF13463.6 AID30935.1 - 0.0093 16.4 0.0 0.017 15.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_23 PF13384.6 AID30935.1 - 0.026 14.3 0.1 0.047 13.5 0.1 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.12 AID30935.1 - 0.027 14.3 0.1 0.048 13.5 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Rrf2 PF02082.20 AID30935.1 - 0.036 14.4 0.0 0.07 13.5 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_28 PF13518.6 AID30935.1 - 0.04 14.1 0.1 0.078 13.1 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_39 PF14090.6 AID30935.1 - 0.041 13.6 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HxlR PF01638.17 AID30935.1 - 0.069 13.0 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF4423 PF14394.6 AID30935.1 - 0.089 12.5 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) EamA PF00892.20 AID30936.1 - 1.1e-09 38.5 31.4 9.5e-09 35.5 12.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family SirB PF04247.12 AID30936.1 - 0.33 11.0 6.2 0.078 13.1 1.5 2.3 1 1 1 2 2 2 0 Invasion gene expression up-regulator, SirB HisKA_2 PF07568.12 AID30937.1 - 6.9e-23 80.5 2.2 1.3e-22 79.7 2.2 1.5 1 0 0 1 1 1 1 Histidine kinase PAS_9 PF13426.7 AID30937.1 - 6.6e-22 77.7 0.1 1.6e-21 76.5 0.0 1.7 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 AID30937.1 - 7e-08 32.5 0.0 2.2e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 AID30937.1 - 7.5e-08 32.9 0.0 4.1e-07 30.5 0.0 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 AID30937.1 - 2e-07 31.6 0.8 2e-07 31.6 0.8 2.1 2 0 0 2 2 2 1 HWE histidine kinase PAS_3 PF08447.12 AID30937.1 - 2.9e-07 30.7 0.0 7.4e-07 29.4 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 AID30937.1 - 1.7e-06 28.0 0.0 7.5e-06 25.9 0.0 2.1 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 AID30937.1 - 5.4e-06 26.6 0.0 1.1e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 AID30937.1 - 2.7e-05 24.1 0.0 5.6e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 AID30937.1 - 0.0078 16.0 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1936 PF09151.10 AID30937.1 - 0.13 12.2 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) Response_reg PF00072.24 AID30938.1 - 9.5e-14 51.5 0.0 1.2e-13 51.2 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.11 AID30938.1 - 0.0065 16.8 0.0 0.0078 16.6 0.0 1.1 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ DLH PF01738.18 AID30939.1 - 2.7e-50 170.9 0.6 3.8e-50 170.4 0.6 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 AID30939.1 - 4.6e-05 23.1 0.6 0.00013 21.7 0.4 1.7 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) BAAT_C PF08840.11 AID30939.1 - 0.001 19.0 2.0 0.17 11.8 0.1 3.2 1 1 2 3 3 3 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 AID30939.1 - 0.0071 16.0 0.1 0.0088 15.7 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 AID30939.1 - 0.011 15.3 1.7 0.21 11.0 0.2 2.5 2 1 1 3 3 3 0 Prolyl oligopeptidase family Chlorophyllase PF07224.11 AID30939.1 - 0.018 14.1 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase EF-hand_1 PF00036.32 AID30939.1 - 0.13 11.9 0.2 0.61 9.8 0.0 2.2 2 0 0 2 2 2 0 EF hand Abhydrolase_6 PF12697.7 AID30939.1 - 1.2 9.7 5.0 2.8 8.5 5.0 1.8 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF2780 PF11075.8 AID30941.1 - 0.0018 18.4 0.8 0.0018 18.4 0.8 2.0 1 1 1 2 2 2 1 Protein of unknown function VcgC/VcgE (DUF2780) DUF2267 PF10025.9 AID30941.1 - 0.059 13.6 0.0 0.097 13.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Bac_DNA_binding PF00216.21 AID30941.1 - 0.072 13.3 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein DUF2026 PF09641.10 AID30941.1 - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2026) PQQ PF01011.21 AID30942.1 - 4.8e-36 121.0 11.0 1.1e-05 25.1 0.0 7.9 8 0 0 8 8 8 7 PQQ enzyme repeat PQQ_2 PF13360.6 AID30942.1 - 2.6e-17 63.2 1.0 4.5e-09 36.2 0.0 3.6 2 1 1 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 AID30942.1 - 8e-12 45.3 31.1 0.017 15.6 0.6 8.7 7 2 0 7 7 7 5 PQQ-like domain ECF_trnsprt PF12822.7 AID30942.1 - 0.022 14.9 5.2 0.04 14.0 5.2 1.4 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DDE_Tnp_ISAZ013 PF07592.11 AID30944.1 - 4e-140 466.1 0.0 4.7e-140 465.9 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain UvrD-helicase PF00580.21 AID30945.1 - 7.9e-71 239.1 0.0 1.4e-57 195.6 0.0 3.5 3 1 0 3 3 3 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 AID30945.1 - 2.3e-64 218.0 0.0 1.7e-63 215.1 0.0 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AID30945.1 - 2.1e-26 93.0 0.0 7e-23 81.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 AID30945.1 - 2.1e-09 37.0 0.0 9.9e-09 34.9 0.0 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 AID30945.1 - 6.9e-07 29.2 2.7 1.2e-05 25.1 0.2 2.9 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 AID30945.1 - 9.9e-05 22.2 0.0 0.011 15.5 0.0 3.2 3 1 0 3 3 3 1 Viral (Superfamily 1) RNA helicase DUF3553 PF12073.8 AID30945.1 - 0.049 13.3 0.2 0.12 12.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) AAA_12 PF13087.6 AID30945.1 - 0.05 13.2 0.0 0.78 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 AID30945.1 - 1.6 9.1 4.3 3.7 7.9 1.0 2.9 2 1 0 2 2 2 0 AAA ATPase domain BPD_transp_2 PF02653.16 AID30946.1 - 5.6e-36 124.1 38.1 5.6e-36 124.1 38.1 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Caveolin PF01146.17 AID30946.1 - 0.005 16.8 0.3 0.005 16.8 0.3 3.0 2 1 1 3 3 3 1 Caveolin ABC_tran PF00005.27 AID30947.1 - 1.3e-32 113.2 0.0 1.8e-32 112.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID30947.1 - 1.2e-08 35.2 0.4 2.2e-05 24.4 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID30947.1 - 2e-05 24.1 0.0 4.6e-05 23.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID30947.1 - 0.0002 21.1 0.1 0.0059 16.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID30947.1 - 0.00049 19.8 0.3 0.0014 18.3 0.2 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID30947.1 - 0.0072 15.2 1.0 0.38 9.5 0.0 2.6 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 AID30947.1 - 0.028 14.9 0.0 0.049 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID30947.1 - 0.03 14.2 0.1 0.054 13.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 AID30947.1 - 0.042 13.9 0.1 0.1 12.7 0.1 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 AID30947.1 - 0.081 12.6 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 AID30947.1 - 0.11 13.1 0.0 0.43 11.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 AID30947.1 - 0.12 12.2 0.0 0.3 10.9 0.0 1.6 2 0 0 2 2 2 0 MukB N-terminal Peripla_BP_4 PF13407.6 AID30948.1 - 5.1e-27 95.1 3.7 6.8e-27 94.7 3.7 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID30948.1 - 0.0032 16.9 0.0 0.0043 16.5 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF3551 PF12071.8 AID30948.1 - 0.17 12.0 1.2 0.35 11.0 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) AP_endonuc_2 PF01261.24 AID30949.1 - 1.7e-29 102.8 0.0 2.1e-29 102.5 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID30949.1 - 0.0023 17.6 0.8 0.0047 16.6 0.0 2.0 2 0 0 2 2 2 1 AP endonuclease family 2 C terminus GFO_IDH_MocA PF01408.22 AID30950.1 - 1.3e-18 68.0 0.1 1.9e-18 67.4 0.1 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 AID30950.1 - 0.00031 21.4 0.3 0.00049 20.7 0.3 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA_C PF02894.17 AID30950.1 - 0.00067 19.7 0.0 0.0016 18.4 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Peripla_BP_3 PF13377.6 AID30952.1 - 8.7e-32 110.7 0.1 4.6e-31 108.4 0.0 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID30952.1 - 3.4e-17 62.8 0.0 4.3e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID30952.1 - 1.1e-12 47.5 0.1 1.8e-12 46.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID30952.1 - 3.9e-07 29.9 0.0 6e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 AID30952.1 - 0.0029 17.3 0.0 0.006 16.3 0.0 1.6 1 1 0 1 1 1 1 Periplasmic binding protein HTH_24 PF13412.6 AID30952.1 - 0.0059 16.1 0.1 0.022 14.3 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding NUMOD1 PF07453.13 AID30952.1 - 0.01 16.1 0.3 0.57 10.5 0.2 2.3 2 0 0 2 2 2 0 NUMOD1 domain MarR_2 PF12802.7 AID30952.1 - 0.013 15.4 0.8 1.2 9.1 0.0 3.5 4 0 0 4 4 4 0 MarR family HTH_Tnp_ISL3 PF13542.6 AID30952.1 - 0.032 13.6 0.1 0.064 12.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MarR PF01047.22 AID30952.1 - 0.093 12.7 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 MarR family LAX PF15681.5 AID30952.1 - 0.11 11.3 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X HTH_23 PF13384.6 AID30952.1 - 0.12 12.2 0.5 2.4 8.0 0.0 2.9 2 1 1 3 3 3 0 Homeodomain-like domain HTH_3 PF01381.22 AID30952.1 - 0.12 12.4 0.0 0.32 11.1 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix Ald_deCOase PF11266.8 AID30953.1 - 0.0041 16.8 0.0 0.0045 16.7 0.0 1.1 1 0 0 1 1 1 1 Long-chain fatty aldehyde decarbonylase AGO_N PF18236.1 AID30953.1 - 0.082 13.1 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Argonaute N domain DUF4239 PF14023.6 AID30954.1 - 1.2e-11 44.7 0.2 1.6e-11 44.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4239) Phage_holin_3_6 PF07332.11 AID30954.1 - 0.023 14.7 5.7 0.21 11.6 1.9 2.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III TetR_C_35 PF18556.1 AID30954.1 - 0.11 12.6 1.4 2.6 8.2 0.3 2.6 2 1 0 2 2 2 0 Bacterial Tetracyclin repressor, C-terminal domain MTTB PF06253.11 AID30955.1 - 2.1e-200 666.0 0.0 2.7e-200 665.7 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) DAO PF01266.24 AID30956.1 - 2.7e-62 211.4 5.4 3.9e-62 210.9 5.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GCV_T PF01571.21 AID30956.1 - 1.5e-54 185.1 0.0 2.3e-54 184.5 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID30956.1 - 4.8e-20 71.3 0.2 1e-19 70.2 0.2 1.6 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 AID30956.1 - 3.6e-16 59.2 0.4 9.1e-16 57.9 0.4 1.7 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain Pyr_redox PF00070.27 AID30956.1 - 0.00099 19.6 0.6 0.048 14.2 0.4 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID30956.1 - 0.002 17.4 0.4 0.57 9.4 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase SoxG PF04268.12 AID30956.1 - 0.0033 17.6 0.0 0.011 15.9 0.0 1.8 1 1 1 2 2 2 1 Sarcosine oxidase, gamma subunit family Pyr_redox_3 PF13738.6 AID30956.1 - 0.005 16.1 0.0 0.93 8.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID30956.1 - 0.026 14.5 3.4 0.43 10.6 0.1 3.2 4 0 0 4 4 4 0 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID30956.1 - 0.11 12.7 0.5 0.59 10.4 0.2 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 AID30956.1 - 0.18 12.1 0.0 0.49 10.7 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain Phytase-like PF13449.6 AID30957.1 - 9.1e-42 143.9 0.5 1.1e-41 143.6 0.5 1.1 1 0 0 1 1 1 1 Esterase-like activity of phytase YkuD PF03734.14 AID30958.1 - 2.4e-16 60.5 0.0 2.9e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain MatE PF01554.18 AID30959.1 - 2.1e-52 177.0 46.3 2.7e-29 101.9 13.8 3.0 2 1 1 3 3 3 3 MatE Polysacc_synt_C PF14667.6 AID30959.1 - 2.3e-05 24.5 20.0 2.3e-05 24.5 20.0 4.7 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF1211 PF06736.11 AID30960.1 - 3.3e-32 110.8 7.1 9.8e-31 106.1 2.7 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF1211) 60KD_IMP PF02096.20 AID30960.1 - 0.11 12.4 3.1 0.72 9.7 2.2 2.1 1 1 1 2 2 2 0 60Kd inner membrane protein DUF2999 PF11212.8 AID30961.1 - 0.05 13.9 0.2 0.65 10.3 0.2 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2999) adh_short PF00106.25 AID30962.1 - 1.5e-40 138.8 0.0 1.7e-40 138.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID30962.1 - 1.8e-30 106.2 0.1 2.3e-30 105.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID30962.1 - 1.8e-05 24.7 0.1 2.5e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 AID30962.1 - 0.043 13.2 0.2 0.54 9.6 0.1 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arg_repressor_C PF02863.18 AID30962.1 - 0.088 12.7 3.1 0.15 11.9 2.7 1.6 1 1 0 1 1 1 0 Arginine repressor, C-terminal domain Iron_permease PF04120.12 AID30963.1 - 1.6e-53 179.9 0.2 1.9e-53 179.6 0.2 1.0 1 0 0 1 1 1 1 Low affinity iron permease S_4TM PF18159.1 AID30963.1 - 0.0048 16.2 0.3 0.0059 16.0 0.3 1.3 1 1 0 1 1 1 1 SMODS-associating 4TM effector domain Hexapep PF00132.24 AID30964.1 - 1.4e-14 53.2 6.9 5.9e-09 35.3 6.1 3.6 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID30964.1 - 2.2e-08 33.7 6.3 1.4e-07 31.1 3.0 2.9 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase zf-C2H2_8 PF15909.5 AID30964.1 - 0.02 15.2 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 C2H2-type zinc ribbon CreA PF05981.12 AID30965.1 - 1.6e-47 160.8 0.0 1.8e-47 160.6 0.0 1.0 1 0 0 1 1 1 1 CreA protein SCO1-SenC PF02630.14 AID30966.1 - 7.4e-52 174.8 0.0 8.7e-52 174.6 0.0 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 AID30966.1 - 1.7e-05 24.7 0.0 2.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 AID30966.1 - 0.0039 16.9 0.1 0.0059 16.3 0.1 1.3 1 1 0 1 1 1 1 Redoxin PrmA PF06325.13 AID30967.1 - 2.1e-74 250.6 0.0 2.4e-74 250.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 AID30967.1 - 6.6e-07 29.0 0.0 1.2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 AID30967.1 - 5.3e-05 23.9 0.0 0.00014 22.5 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID30967.1 - 0.00012 21.8 0.0 0.00021 21.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 AID30967.1 - 0.00074 19.3 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.7 AID30967.1 - 0.0037 17.2 0.0 0.0062 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 AID30967.1 - 0.0038 17.0 0.0 0.0057 16.4 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_12 PF08242.12 AID30967.1 - 0.01 16.6 0.0 0.024 15.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 AID30967.1 - 0.02 14.7 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 AID30967.1 - 0.15 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Peptidase_M24 PF00557.24 AID30969.1 - 2.8e-48 164.4 0.0 4e-48 163.9 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N_2 PF16189.5 AID30969.1 - 6.3e-29 101.2 0.0 1.7e-28 99.7 0.0 1.8 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Creatinase_N PF01321.18 AID30969.1 - 7.2e-23 81.7 0.0 3.6e-18 66.5 0.0 2.3 2 0 0 2 2 2 2 Creatinase/Prolidase N-terminal domain Peptidase_M24_C PF16188.5 AID30969.1 - 8.2e-22 77.1 0.0 2.4e-21 75.5 0.0 1.9 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 AzlD PF05437.12 AID30970.1 - 1.6e-16 60.3 9.7 1.8e-16 60.1 9.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) AzlC PF03591.14 AID30971.1 - 2.5e-35 121.9 12.6 5e-35 120.9 12.6 1.5 1 0 0 1 1 1 1 AzlC protein MerC PF03203.14 AID30971.1 - 0.52 10.8 17.3 0.047 14.1 3.9 2.2 1 1 1 2 2 2 0 MerC mercury resistance protein DUF2461 PF09365.10 AID30972.1 - 7.7e-49 166.5 0.0 8.6e-49 166.3 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein (DUF2461) DNA_ligase_aden PF01653.18 AID30973.1 - 2.1e-114 381.9 0.0 3.5e-114 381.2 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 AID30973.1 - 2.9e-31 107.2 4.1 6.4e-31 106.1 4.1 1.6 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 AID30973.1 - 7.2e-13 48.4 0.2 6.6e-12 45.3 0.2 2.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif BRCT PF00533.26 AID30973.1 - 5.5e-11 42.7 0.0 1.1e-10 41.7 0.0 1.5 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain DNA_ligase_ZBD PF03119.16 AID30973.1 - 6.4e-08 32.5 2.7 1.5e-07 31.3 2.7 1.7 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain PTCB-BRCT PF12738.7 AID30973.1 - 0.0002 21.2 0.0 0.00041 20.3 0.0 1.5 1 0 0 1 1 1 1 twin BRCT domain CHIP_TPR_N PF18391.1 AID30973.1 - 0.44 11.3 3.6 0.23 12.3 0.7 2.0 2 0 0 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain SMC_N PF02463.19 AID30974.1 - 5.3e-16 58.7 0.0 8.8e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID30974.1 - 1.1e-10 42.4 0.0 2.6e-10 41.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 AID30974.1 - 4.9e-09 36.4 0.0 0.0027 17.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID30974.1 - 4.1e-05 23.2 0.1 7.7e-05 22.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID30974.1 - 0.0011 19.2 1.2 0.035 14.4 0.0 3.6 2 1 1 3 3 3 1 AAA domain DUF2813 PF11398.8 AID30974.1 - 0.0034 16.7 0.1 0.0065 15.8 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) RsgA_GTPase PF03193.16 AID30974.1 - 0.018 15.0 0.0 0.087 12.7 0.0 2.1 3 0 0 3 3 3 0 RsgA GTPase ABC_tran PF00005.27 AID30974.1 - 0.032 14.7 0.0 0.22 12.0 0.1 2.4 3 1 0 3 3 3 0 ABC transporter HMMR_N PF15905.5 AID30974.1 - 0.059 12.8 1.9 0.13 11.7 0.1 2.1 1 1 2 3 3 3 0 Hyaluronan mediated motility receptor N-terminal AAA_15 PF13175.6 AID30974.1 - 0.089 12.5 0.0 0.17 11.6 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 AID30974.1 - 0.095 12.6 0.1 0.28 11.1 0.1 1.8 1 0 0 1 1 1 0 NACHT domain Spc7 PF08317.11 AID30974.1 - 2.2 7.1 8.4 0.63 8.9 1.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein YfiO PF13525.6 AID30975.1 - 2.2e-53 181.0 10.6 2.2e-53 181.0 10.6 1.6 1 1 1 2 2 2 1 Outer membrane lipoprotein TPR_6 PF13174.6 AID30975.1 - 1.1e-19 69.6 7.3 0.00031 21.2 0.1 5.3 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_18 PF13512.6 AID30975.1 - 1e-14 54.9 9.8 5.6e-14 52.5 3.8 2.9 2 2 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 AID30975.1 - 8.4e-14 51.9 1.9 7.1e-06 26.6 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 AID30975.1 - 1.2e-06 28.1 9.2 0.03 14.4 0.1 5.0 4 1 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID30975.1 - 2e-06 28.1 4.6 0.36 11.8 0.1 4.4 3 2 2 5 5 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 AID30975.1 - 4.5e-06 27.1 3.6 0.021 15.3 0.0 3.7 2 1 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 AID30975.1 - 0.0045 17.1 3.8 4.4 7.8 0.0 4.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID30975.1 - 0.0073 16.6 9.1 0.1 12.9 0.2 3.3 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID30975.1 - 0.012 15.5 7.1 0.31 10.9 0.2 3.8 5 0 0 5 5 5 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 AID30975.1 - 0.048 13.6 3.9 16 5.3 0.1 4.2 3 1 2 5 5 5 0 Virulence factor membrane-bound polymerase, C-terminal NFRKB_winged PF14465.6 AID30975.1 - 0.13 12.5 0.2 0.51 10.6 0.1 2.1 3 0 0 3 3 3 0 NFRKB Winged Helix-like LpxC PF03331.13 AID30976.1 - 4.8e-97 324.7 0.0 5.6e-97 324.5 0.0 1.0 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase Tubulin PF00091.25 AID30977.1 - 9.4e-40 136.9 0.6 1.5e-39 136.2 0.6 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 AID30977.1 - 8.1e-39 131.8 3.8 2.8e-38 130.1 3.8 2.0 1 0 0 1 1 1 1 FtsZ family, C-terminal domain TFIIA PF03153.13 AID30977.1 - 0.37 10.7 11.1 0.53 10.2 11.1 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Tubulin_2 PF13809.6 AID30977.1 - 1.2 8.2 3.4 1.1 8.4 0.8 2.0 1 1 1 2 2 2 0 Tubulin like FtsA PF14450.6 AID30978.1 - 4.1e-33 113.9 0.6 4.1e-21 75.3 0.0 2.3 2 0 0 2 2 2 2 Cell division protein FtsA SHS2_FTSA PF02491.20 AID30978.1 - 2.2e-20 72.8 0.0 4.4e-20 71.9 0.0 1.6 1 0 0 1 1 1 1 SHS2 domain inserted in FTSA MreB_Mbl PF06723.13 AID30978.1 - 3.6e-08 32.6 4.1 1.5e-07 30.6 0.8 2.9 3 1 0 3 3 3 1 MreB/Mbl protein EutA PF06277.11 AID30978.1 - 5.4e-06 25.5 0.1 8.4e-06 24.9 0.1 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA PilM_2 PF11104.8 AID30978.1 - 5.2e-05 22.4 0.0 0.0099 14.9 0.0 2.9 2 1 1 3 3 3 1 Type IV pilus assembly protein PilM; HSP70 PF00012.20 AID30978.1 - 0.0022 16.3 0.7 0.45 8.6 0.1 2.7 3 0 0 3 3 3 2 Hsp70 protein DUF3237 PF11578.8 AID30978.1 - 0.066 13.1 0.2 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3237) DDR PF08841.10 AID30978.1 - 0.26 10.3 5.8 0.041 12.9 1.4 1.8 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain POTRA_1 PF08478.10 AID30979.1 - 5.3e-20 71.5 0.1 1.1e-19 70.4 0.1 1.6 2 0 0 2 2 2 1 POTRA domain, FtsQ-type FtsQ PF03799.15 AID30979.1 - 9.9e-18 65.1 0.1 1.7e-17 64.3 0.1 1.4 1 0 0 1 1 1 1 Cell division protein FtsQ Dala_Dala_lig_C PF07478.13 AID30980.1 - 3.6e-43 147.5 0.0 4.8e-43 147.1 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 AID30980.1 - 4.2e-18 65.7 0.0 1.5e-16 60.7 0.0 2.4 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp_4 PF13535.6 AID30980.1 - 0.00011 21.9 0.1 0.00061 19.4 0.1 2.0 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AID30980.1 - 0.00023 20.7 0.0 0.00039 20.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 AID30980.1 - 0.00058 19.9 0.1 0.00088 19.4 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 AID30980.1 - 0.00088 19.1 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.6 AID30980.1 - 0.057 12.7 0.0 0.74 9.0 0.0 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Glyco_tran_28_C PF04101.16 AID30981.1 - 5.6e-37 127.3 0.0 6.8e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain HEAT_EZ PF13513.6 AID30981.1 - 0.0015 19.0 4.8 0.0041 17.6 2.5 2.8 3 0 0 3 3 3 1 HEAT-like repeat Glyco_trans_1_3 PF13528.6 AID30981.1 - 0.017 14.4 0.0 0.025 13.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 1 FTSW_RODA_SPOVE PF01098.19 AID30982.1 - 6.2e-74 249.1 21.4 7.8e-74 248.8 21.4 1.0 1 0 0 1 1 1 1 Cell cycle protein AC_N PF16214.5 AID30982.1 - 0.55 9.3 5.3 0.96 8.5 5.3 1.3 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF2079 PF09852.9 AID30982.1 - 2 7.2 13.9 1.6 7.5 9.0 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2079) Mur_ligase_M PF08245.12 AID30983.1 - 1.9e-30 106.3 0.0 2.8e-30 105.8 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AID30983.1 - 1.6e-05 25.1 0.0 4.4e-05 23.7 0.0 1.8 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain 2-Hacid_dh_C PF02826.19 AID30983.1 - 0.0026 17.1 0.0 0.0092 15.4 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID30983.1 - 0.035 14.4 0.1 0.66 10.3 0.0 2.5 3 0 0 3 3 3 0 TrkA-N domain NAD_binding_2 PF03446.15 AID30983.1 - 0.036 14.2 0.0 0.1 12.8 0.0 1.8 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Glycos_transf_4 PF00953.21 AID30984.1 - 1.1e-33 116.5 15.5 1.1e-33 116.5 15.5 2.4 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 AID30984.1 - 1.9e-05 24.0 2.5 1.9e-05 24.0 2.5 2.8 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Mur_ligase_M PF08245.12 AID30985.1 - 6.3e-48 163.3 0.0 8.6e-48 162.9 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase PF01225.25 AID30985.1 - 6.1e-13 48.9 1.7 1e-12 48.2 0.5 2.2 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_C PF02875.21 AID30985.1 - 1.8e-10 40.9 1.7 5.4e-09 36.2 0.0 3.5 4 0 0 4 4 4 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 AID30986.1 - 1.7e-45 155.4 0.0 2.6e-45 154.8 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 AID30986.1 - 3.7e-22 78.4 0.0 3.1e-21 75.4 0.0 2.4 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 AID30986.1 - 2.4e-11 43.8 1.1 2.6e-09 37.3 0.1 3.2 4 0 0 4 4 4 1 Mur ligase family, catalytic domain Transpeptidase PF00905.22 AID30987.1 - 3.9e-55 187.2 0.0 5.4e-55 186.8 0.0 1.2 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 AID30987.1 - 2.2e-11 44.4 0.1 8.6e-11 42.5 0.1 1.8 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain Beta-lactamase PF00144.24 AID30987.1 - 0.00082 18.7 0.0 0.0018 17.6 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase FtsL PF04999.13 AID30988.1 - 0.081 12.9 0.7 0.1 12.6 0.7 1.2 1 0 0 1 1 1 0 Cell division protein FtsL MraZ PF02381.18 AID30989.1 - 3.2e-11 43.1 0.1 2.2e-05 24.4 0.0 2.5 3 0 0 3 3 3 2 MraZ protein, putative antitoxin-like Methyltransf_5 PF01795.19 AID30990.1 - 2.3e-91 306.5 0.0 2.6e-91 306.3 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_25 PF13649.6 AID30990.1 - 2.1e-06 28.3 0.1 7.1e-05 23.4 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID30990.1 - 5.4e-06 27.0 0.1 0.012 16.2 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 AID30990.1 - 0.00029 20.7 0.0 0.44 10.3 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 AID30990.1 - 0.023 15.4 0.0 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain Ubie_methyltran PF01209.18 AID30990.1 - 0.12 11.7 0.1 1.1 8.6 0.0 2.1 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Cys_Met_Meta_PP PF01053.20 AID30991.1 - 8.4e-82 274.7 0.0 1.8e-81 273.6 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID30991.1 - 0.055 12.4 0.0 0.11 11.4 0.0 1.4 1 1 0 1 1 1 0 Aminotransferase class-V ParE_toxin PF05016.15 AID30992.1 - 0.022 15.4 0.4 0.025 15.2 0.4 1.1 1 0 0 1 1 1 0 ParE toxin of type II toxin-antitoxin system, parDE ParD_antitoxin PF03693.14 AID30993.1 - 5.6e-08 33.1 0.1 7.7e-08 32.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RHH_1 PF01402.21 AID30993.1 - 1.8e-06 27.6 0.2 1.8e-06 27.6 0.2 2.7 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family Fur_reg_FbpA PF13076.6 AID30993.1 - 0.0013 18.4 0.1 0.0026 17.4 0.1 1.5 1 0 0 1 1 1 1 Fur-regulated basic protein A RuvA_C PF07499.13 AID30993.1 - 0.0013 19.1 0.5 0.0033 17.9 0.3 1.7 2 0 0 2 2 2 1 RuvA, C-terminal domain VapB_antitoxin PF09957.9 AID30993.1 - 0.11 12.4 1.6 0.15 12.0 0.2 2.0 2 1 1 3 3 3 0 Bacterial antitoxin of type II TA system, VapB SLT PF01464.20 AID30994.1 - 8.7e-19 67.3 0.6 2.2e-18 66.0 0.6 1.7 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT_2 PF13406.6 AID30994.1 - 0.027 13.7 4.8 0.072 12.3 1.4 2.4 1 1 1 2 2 2 0 Transglycosylase SLT domain Amidase_2 PF01510.25 AID30995.1 - 2.1e-29 102.5 0.0 3.9e-29 101.7 0.0 1.4 2 0 0 2 2 2 1 N-acetylmuramoyl-L-alanine amidase PG_binding_1 PF01471.18 AID30995.1 - 1.1e-10 41.6 0.0 1.6e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Putative peptidoglycan binding domain TerB PF05099.13 AID30996.1 - 3.5e-28 98.4 3.0 5.1e-28 97.8 3.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TerB DnaJ PF00226.31 AID30996.1 - 1.3e-07 31.6 0.0 2.8e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain T4_Gp59_C PF08994.10 AID30996.1 - 0.03 14.9 0.0 0.082 13.5 0.0 1.8 1 1 0 1 1 1 0 T4 gene Gp59 loader of gp41 DNA helicase C-term TPR_10 PF13374.6 AID30996.1 - 0.067 13.1 0.0 0.24 11.3 0.0 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF533 PF04391.12 AID30996.1 - 0.25 10.9 1.6 11 5.6 0.0 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF533) DUF4995 PF16386.5 AID30997.1 - 0.11 12.5 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function LPAM_1 PF08139.12 AID30997.1 - 5.4 7.7 7.6 35 5.1 7.6 2.0 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Hydantoinase_B PF02538.14 AID30998.1 - 1.4e-191 637.4 2.3 2.5e-191 636.6 2.3 1.4 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 AID30998.1 - 7e-113 376.7 2.8 7e-113 376.7 2.8 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 AID30998.1 - 3e-60 203.0 0.0 4.8e-58 195.8 0.0 2.7 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region TACC_C PF05010.14 AID30998.1 - 0.26 11.1 0.0 0.41 10.4 0.0 1.3 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF3419 PF11899.8 AID30999.1 - 1.8e-115 386.3 0.0 2.2e-115 385.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3419) Methyltransf_25 PF13649.6 AID31000.1 - 1.3e-16 61.1 0.0 2.2e-16 60.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID31000.1 - 1.3e-14 54.2 0.0 1.6e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31000.1 - 6.2e-13 49.2 0.0 8.9e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID31000.1 - 2.6e-12 47.3 0.0 3.8e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31000.1 - 5.7e-11 42.5 0.0 7.7e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID31000.1 - 1.1e-09 38.0 0.0 1.4e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 AID31000.1 - 4.1e-08 32.8 0.0 5.2e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 AID31000.1 - 1.9e-06 27.4 0.0 3.1e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 AID31000.1 - 1.3e-05 24.8 0.0 0.00019 21.0 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_33 PF10017.9 AID31000.1 - 0.0011 18.2 0.0 0.0014 17.9 0.0 1.2 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent PCMT PF01135.19 AID31000.1 - 0.0012 18.6 0.0 0.0017 18.1 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_3 PF01596.17 AID31000.1 - 0.02 14.1 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase TehB PF03848.14 AID31000.1 - 0.025 14.0 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB GCD14 PF08704.10 AID31000.1 - 0.027 14.2 0.0 0.099 12.3 0.0 1.7 1 1 1 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_2 PF00891.18 AID31000.1 - 0.042 13.1 0.0 0.061 12.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_24 PF13578.6 AID31000.1 - 0.071 14.1 0.0 0.12 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 AID31000.1 - 0.11 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_15 PF09445.10 AID31000.1 - 0.18 11.3 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 AID31000.1 - 0.19 11.8 0.0 0.31 11.1 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase Beta-lactamase PF00144.24 AID31001.1 - 7.8e-20 71.4 3.2 1.2e-19 70.7 3.2 1.2 1 0 0 1 1 1 1 Beta-lactamase Glyco_hydro_25 PF01183.20 AID31002.1 - 9.2e-57 192.1 0.0 1.1e-56 191.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 SLT_2 PF13406.6 AID31003.1 - 1.5e-82 277.1 0.0 2.1e-82 276.6 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase SLT domain PG_binding_1 PF01471.18 AID31003.1 - 3.5e-14 52.7 0.1 6.8e-14 51.8 0.1 1.5 1 0 0 1 1 1 1 Putative peptidoglycan binding domain PepSY_2 PF13670.6 AID31003.1 - 0.012 15.5 4.9 1.4 9.0 0.0 2.5 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain PG_binding_3 PF09374.10 AID31003.1 - 0.016 15.5 0.1 0.058 13.7 0.1 2.0 1 0 0 1 1 1 0 Predicted Peptidoglycan domain Glucosaminidase PF01832.20 AID31003.1 - 0.16 12.5 0.0 0.61 10.6 0.0 1.9 2 0 0 2 2 2 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LysR_substrate PF03466.20 AID31004.1 - 3.1e-48 163.9 1.5 4.6e-48 163.3 1.5 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31004.1 - 1.9e-20 72.5 1.2 3.9e-20 71.5 1.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID31004.1 - 0.11 12.3 0.1 0.26 11.1 0.1 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain adh_short_C2 PF13561.6 AID31005.1 - 1.5e-57 194.9 3.1 1.8e-57 194.6 3.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31005.1 - 5.2e-44 150.1 2.0 5.9e-44 149.9 2.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31005.1 - 1.5e-11 44.5 1.1 2e-11 44.1 1.1 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 AID31005.1 - 0.0012 18.8 1.8 0.0016 18.4 1.8 1.2 1 0 0 1 1 1 1 NAD(P)H-binding THF_DHG_CYH_C PF02882.19 AID31005.1 - 0.023 14.0 0.2 0.049 13.0 0.1 1.7 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 AID31005.1 - 0.038 13.4 0.2 0.092 12.2 0.2 1.7 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Glyco_transf_4 PF13439.6 AID31005.1 - 0.071 13.1 0.0 5.3 7.0 0.0 2.3 3 0 0 3 3 3 0 Glycosyltransferase Family 4 Orn_Arg_deC_N PF02784.16 AID31006.1 - 1.1e-34 120.0 0.0 1.3e-34 119.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 AID31006.1 - 4.5e-09 36.4 0.0 5.4e-09 36.2 0.0 1.3 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 AID31006.1 - 6.6e-07 29.2 0.0 1.1e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain EamA PF00892.20 AID31008.1 - 3.5e-38 130.9 39.1 3.4e-19 69.4 13.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 AID31008.1 - 0.36 9.7 6.2 0.5 9.2 1.6 2.1 2 0 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like MTHFR PF02219.17 AID31009.1 - 1.2e-85 287.3 0.0 1.3e-85 287.2 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase Methyltransf_31 PF13847.6 AID31010.1 - 1.1e-23 83.7 0.0 2e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31010.1 - 1.6e-22 79.9 0.0 4e-22 78.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID31010.1 - 7.2e-20 71.5 0.0 1.2e-18 67.6 0.0 2.6 2 1 1 3 3 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31010.1 - 2.3e-18 66.6 0.0 3.5e-18 66.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain HTH_5 PF01022.20 AID31010.1 - 8.5e-16 57.6 1.1 1.6e-15 56.7 1.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Methyltransf_12 PF08242.12 AID31010.1 - 7.3e-15 55.5 0.0 1.9e-14 54.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID31010.1 - 5.3e-13 48.8 0.0 7.1e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family HTH_20 PF12840.7 AID31010.1 - 2.1e-10 40.5 2.7 2.4e-10 40.3 0.9 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 AID31010.1 - 1.3e-09 37.8 2.9 3.6e-09 36.4 0.4 2.6 3 0 0 3 3 3 1 MarR family HTH_24 PF13412.6 AID31010.1 - 3e-07 29.9 0.6 6e-07 28.9 0.6 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MTS PF05175.14 AID31010.1 - 7.7e-07 28.8 0.0 1.6e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 AID31010.1 - 4e-06 26.7 0.0 6e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TrmB PF01978.19 AID31010.1 - 4.2e-06 26.5 0.0 8.9e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 AID31010.1 - 8.2e-06 25.7 0.1 1.7e-05 24.7 0.1 1.5 1 0 0 1 1 1 1 MarR family NodS PF05401.11 AID31010.1 - 9.2e-06 25.4 0.0 2.3e-05 24.1 0.0 1.6 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_2 PF00891.18 AID31010.1 - 1.1e-05 24.8 0.0 1.7e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain MetW PF07021.12 AID31010.1 - 0.00038 20.1 0.0 0.00052 19.7 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Rsm22 PF09243.10 AID31010.1 - 0.0012 18.2 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 HTH_29 PF13551.6 AID31010.1 - 0.0029 17.6 0.0 0.0095 15.9 0.0 2.0 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 AID31010.1 - 0.0037 17.4 0.1 0.012 15.7 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID31010.1 - 0.0047 16.7 0.8 0.013 15.3 0.8 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID31010.1 - 0.01 15.8 0.1 0.042 13.8 0.1 2.1 2 0 0 2 2 1 0 Crp-like helix-turn-helix domain DUF4423 PF14394.6 AID31010.1 - 0.04 13.6 0.0 0.096 12.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_36 PF13730.6 AID31010.1 - 0.06 13.3 0.0 0.22 11.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 AID31010.1 - 0.18 11.8 0.3 0.4 10.7 0.3 1.6 1 0 0 1 1 1 0 HTH domain TrmO PF01980.16 AID31011.1 - 9.8e-28 96.8 0.0 1.2e-27 96.5 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O DUF2293 PF10056.9 AID31012.1 - 1.2e-18 67.1 0.3 2.3e-18 66.2 0.3 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2293) Aminotran_4 PF01063.19 AID31014.1 - 1.9e-44 152.2 0.0 2.2e-44 152.0 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV adh_short PF00106.25 AID31015.1 - 1.3e-50 171.6 0.4 1.6e-50 171.3 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31015.1 - 8.2e-37 127.0 3.8 1e-36 126.7 3.8 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31015.1 - 2.6e-13 50.3 1.0 3.9e-13 49.7 1.0 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 AID31015.1 - 4.6e-08 33.2 1.7 6.2e-08 32.7 1.7 1.2 1 0 0 1 1 1 1 NAD(P)H-binding DUF1776 PF08643.10 AID31015.1 - 0.00023 20.7 0.0 0.00029 20.3 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) MOSC PF03473.17 AID31016.1 - 2.7e-07 30.7 0.0 2e-06 27.9 0.0 1.9 1 1 0 1 1 1 1 MOSC domain Tautomerase PF01361.21 AID31017.1 - 0.027 14.4 0.1 8.1 6.5 0.0 2.6 2 1 0 2 2 2 0 Tautomerase enzyme 3-dmu-9_3-mt PF06983.13 AID31018.1 - 0.0052 17.3 0.0 0.0089 16.6 0.0 1.4 1 1 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase TetR_N PF00440.23 AID31019.1 - 9.8e-10 38.1 0.5 5.6e-09 35.7 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID31019.1 - 0.0093 16.3 0.9 0.019 15.3 0.5 1.8 1 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain P21-Arc PF04062.14 AID31019.1 - 0.03 14.4 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 ARP2/3 complex ARPC3 (21 kDa) subunit CSTF_C PF14304.6 AID31019.1 - 0.15 11.7 0.5 1.1 8.9 0.3 2.2 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal PEMT PF04191.13 AID31021.1 - 2.1e-12 47.3 0.3 2.9e-12 46.9 0.3 1.2 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 AID31021.1 - 3e-12 46.8 0.3 5e-12 46.1 0.3 1.3 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NnrU PF07298.11 AID31021.1 - 5.8e-06 26.0 5.0 7e-06 25.7 5.0 1.1 1 0 0 1 1 1 1 NnrU protein DUF2905 PF11146.8 AID31021.1 - 0.62 10.3 7.6 1.6 8.9 0.8 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2905) GFA PF04828.14 AID31022.1 - 5.3e-23 81.2 0.0 8e-23 80.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Zn_ribbon_SprT PF17283.2 AID31022.1 - 0.89 9.5 5.5 9.1 6.3 0.0 3.1 3 0 0 3 3 3 0 SprT-like zinc ribbon domain ACP_syn_III_C PF08541.10 AID31023.1 - 1.6e-23 82.7 1.0 2.7e-22 78.8 0.1 2.7 2 1 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 AID31023.1 - 5.1e-17 61.5 0.1 1.5e-16 60.0 0.0 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Chal_sti_synt_N PF00195.19 AID31023.1 - 5.1e-07 29.3 0.0 8.8e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain FAE1_CUT1_RppA PF08392.12 AID31023.1 - 0.00014 21.3 0.0 0.00023 20.6 0.0 1.3 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein ketoacyl-synt PF00109.26 AID31023.1 - 0.00022 20.9 1.4 0.057 13.0 0.5 2.3 1 1 1 2 2 2 2 Beta-ketoacyl synthase, N-terminal domain Thiolase_N PF00108.23 AID31023.1 - 0.0014 18.0 0.1 0.0024 17.3 0.1 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain CarboxypepD_reg PF13620.6 AID31024.1 - 0.14 12.4 0.1 0.8 10.0 0.1 2.0 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain Methyltransf_31 PF13847.6 AID31025.1 - 9.6e-18 64.4 0.0 1.3e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID31025.1 - 8.4e-17 61.7 0.0 1.6e-16 60.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31025.1 - 1.3e-16 60.9 0.0 1.7e-16 60.5 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31025.1 - 1e-13 51.7 0.0 2.8e-13 50.3 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID31025.1 - 2.8e-12 47.2 0.0 4.7e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AID31025.1 - 6.7e-05 22.7 0.0 9.7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 AID31025.1 - 0.00025 21.2 0.0 0.00032 20.9 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase MTS PF05175.14 AID31025.1 - 0.00054 19.5 0.0 0.00078 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 AID31025.1 - 0.0032 16.8 0.0 0.006 15.9 0.0 1.5 2 0 0 2 2 2 1 O-methyltransferase domain Methyltransf_4 PF02390.17 AID31025.1 - 0.0036 16.8 0.0 0.011 15.2 0.0 1.7 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_32 PF13679.6 AID31025.1 - 0.0096 15.9 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID31025.1 - 0.012 14.9 0.0 0.018 14.3 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase CheR PF01739.18 AID31025.1 - 0.017 14.6 0.0 0.74 9.3 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain RrnaAD PF00398.20 AID31025.1 - 0.066 12.3 0.0 0.088 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_5 PF01795.19 AID31025.1 - 0.12 11.9 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 MraW methylase family Methyltransf_33 PF10017.9 AID31025.1 - 0.21 10.7 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent ABC_tran PF00005.27 AID31026.1 - 4.2e-56 189.3 0.0 3.3e-29 102.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31026.1 - 3e-18 66.7 3.6 0.00039 20.3 0.1 4.4 3 1 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 AID31026.1 - 1.7e-15 56.8 4.8 2.2e-13 50.0 3.0 2.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 AID31026.1 - 5.7e-09 35.7 2.5 0.17 11.3 0.0 4.3 3 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID31026.1 - 3.8e-08 33.7 1.4 0.008 16.5 0.0 3.2 2 2 0 3 3 3 2 AAA domain AAA_29 PF13555.6 AID31026.1 - 7.2e-07 28.9 0.3 0.018 14.8 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 AID31026.1 - 1.9e-06 28.5 11.1 0.0067 16.9 0.1 3.2 2 1 1 3 3 3 2 AAA domain AAA_18 PF13238.6 AID31026.1 - 6.5e-05 23.5 0.3 0.19 12.3 0.0 3.4 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID31026.1 - 0.00018 21.9 2.9 0.91 9.9 0.0 3.5 2 1 1 3 3 3 2 AAA ATPase domain MMR_HSR1 PF01926.23 AID31026.1 - 0.00021 21.4 0.0 0.34 11.0 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_24 PF13479.6 AID31026.1 - 0.00053 19.8 2.3 0.44 10.2 0.1 2.9 3 0 0 3 3 2 2 AAA domain Roc PF08477.13 AID31026.1 - 0.00065 19.9 1.3 0.52 10.5 0.1 3.3 2 1 1 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 AID31026.1 - 0.00068 18.9 0.0 1.4 8.1 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain AAA_33 PF13671.6 AID31026.1 - 0.0015 18.7 0.5 0.47 10.6 0.1 2.8 2 1 0 2 2 2 1 AAA domain AAA_28 PF13521.6 AID31026.1 - 0.0022 18.3 3.4 1.1 9.5 0.0 3.2 4 0 0 4 4 2 2 AAA domain AAA_15 PF13175.6 AID31026.1 - 0.0027 17.5 0.5 0.35 10.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_27 PF13514.6 AID31026.1 - 0.0028 17.3 0.0 3 7.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 AID31026.1 - 0.003 17.5 0.1 0.6 10.0 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase SbcCD_C PF13558.6 AID31026.1 - 0.0035 17.5 2.1 5.6 7.3 0.0 4.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 AID31026.1 - 0.0054 16.8 0.1 2.4 8.2 0.0 3.4 4 1 0 4 4 3 1 AAA domain AAA_30 PF13604.6 AID31026.1 - 0.0055 16.4 0.6 3.6 7.3 0.0 2.9 3 0 0 3 3 2 1 AAA domain cobW PF02492.19 AID31026.1 - 0.007 16.0 0.5 0.78 9.3 0.1 2.5 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DLIC PF05783.11 AID31026.1 - 0.013 14.4 0.1 0.34 9.7 0.0 2.2 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) ATPase_2 PF01637.18 AID31026.1 - 0.017 15.0 0.4 7.9 6.3 0.0 3.1 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea AAA_13 PF13166.6 AID31026.1 - 0.021 13.5 5.1 2.4 6.7 0.1 3.6 3 2 1 4 4 4 0 AAA domain PRK PF00485.18 AID31026.1 - 0.038 13.7 0.1 7.5 6.2 0.0 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family G-alpha PF00503.20 AID31026.1 - 0.041 13.0 0.0 0.42 9.7 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit RNA_helicase PF00910.22 AID31026.1 - 0.096 13.1 0.4 16 6.0 0.0 2.6 2 1 0 2 2 2 0 RNA helicase AAA_25 PF13481.6 AID31026.1 - 0.11 12.0 0.1 13 5.3 0.0 3.1 3 0 0 3 3 3 0 AAA domain LIP1 PF15904.5 AID31026.1 - 0.13 12.6 0.1 0.41 11.0 0.0 1.9 2 0 0 2 2 1 0 LKB1 serine/threonine kinase interacting protein 1 AAA PF00004.29 AID31026.1 - 0.13 12.7 3.3 4.8 7.6 0.3 3.1 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID31026.1 - 0.13 12.1 0.0 3.5 7.5 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain Cytidylate_kin PF02224.18 AID31026.1 - 0.3 10.8 1.5 1.6 8.4 0.0 2.5 3 0 0 3 3 2 0 Cytidylate kinase ATP_bind_1 PF03029.17 AID31026.1 - 0.31 10.8 3.2 8.4 6.1 0.1 2.8 4 0 0 4 4 3 0 Conserved hypothetical ATP binding protein NACHT PF05729.12 AID31026.1 - 1.1 9.2 5.7 13 5.7 0.3 2.9 3 0 0 3 3 3 0 NACHT domain GGDEF PF00990.21 AID31027.1 - 1.7e-33 115.7 0.0 2.3e-33 115.2 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Ribonuclease_T2 PF00445.18 AID31028.1 - 1.6e-21 77.4 0.0 2.3e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family Hydrolase_4 PF12146.8 AID31029.1 - 3e-48 164.2 0.1 3.7e-48 163.9 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID31029.1 - 8.7e-12 45.2 0.1 1.6e-09 37.8 0.1 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID31029.1 - 4.3e-11 43.8 6.1 5.8e-11 43.4 6.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 AID31029.1 - 0.011 15.4 0.0 0.016 14.8 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Thioesterase PF00975.20 AID31029.1 - 0.013 15.7 0.1 0.019 15.1 0.1 1.4 1 0 0 1 1 1 0 Thioesterase domain Cutinase PF01083.22 AID31029.1 - 0.069 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Cutinase Esterase PF00756.20 AID31029.1 - 0.17 11.5 0.1 0.35 10.5 0.1 1.5 1 0 0 1 1 1 0 Putative esterase LCAT PF02450.15 AID31029.1 - 0.27 10.4 0.0 0.42 9.7 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase CoA_transf_3 PF02515.17 AID31030.1 - 1.9e-130 435.3 0.0 2.1e-130 435.1 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III TPP_enzyme_N PF02776.18 AID31031.1 - 7.7e-55 185.1 0.1 5.1e-53 179.2 0.0 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID31031.1 - 2.5e-45 154.0 1.2 4e-45 153.3 0.2 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 AID31031.1 - 2.3e-23 82.5 0.0 6.1e-23 81.1 0.0 1.8 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain E1_dh PF00676.20 AID31031.1 - 0.00084 18.4 0.6 0.036 13.0 0.1 2.3 2 0 0 2 2 2 2 Dehydrogenase E1 component CHRD PF07452.12 AID31032.1 - 1.7e-31 109.5 0.2 2.1e-31 109.3 0.2 1.1 1 0 0 1 1 1 1 CHRD domain Cys_Met_Meta_PP PF01053.20 AID31033.1 - 2.9e-98 328.9 0.0 3.3e-98 328.7 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID31033.1 - 6.2e-06 25.6 0.0 9.4e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II AsnC_trans_reg PF01037.21 AID31034.1 - 1.9e-23 82.2 0.2 2.9e-23 81.6 0.2 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID31034.1 - 1.1e-21 76.1 0.3 1.7e-21 75.5 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID31034.1 - 1.5e-17 63.1 3.0 2.7e-17 62.3 3.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 AID31034.1 - 1.4e-06 28.2 0.1 2.2e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID31034.1 - 2.3e-05 24.2 0.1 3.6e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID31034.1 - 5.4e-05 23.1 0.0 0.00012 22.0 0.0 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 AID31034.1 - 5.9e-05 22.9 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID31034.1 - 0.004 16.9 0.0 0.0063 16.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 AID31034.1 - 0.004 17.1 0.0 0.0074 16.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_3 PF01381.22 AID31034.1 - 0.0071 16.4 0.0 0.016 15.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID31034.1 - 0.013 15.8 0.1 0.034 14.5 0.1 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_19 PF12844.7 AID31034.1 - 0.024 14.7 0.1 0.047 13.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 AID31034.1 - 0.025 14.7 0.0 0.047 13.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF5337 PF17272.2 AID31034.1 - 0.026 14.3 0.0 0.042 13.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5337) Fe_dep_repress PF01325.19 AID31034.1 - 0.03 14.5 0.0 0.058 13.6 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_CodY PF08222.11 AID31034.1 - 0.036 13.6 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain Rrf2 PF02082.20 AID31034.1 - 0.063 13.6 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_10 PF04967.12 AID31034.1 - 0.063 13.1 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain NMT1 PF09084.11 AID31035.1 - 8.9e-38 130.4 0.1 1.2e-37 130.0 0.1 1.1 1 0 0 1 1 1 1 NMT1/THI5 like BPD_transp_1 PF00528.22 AID31036.1 - 3.5e-17 62.8 17.3 3.5e-17 62.8 17.3 3.2 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component Peptidase_A22B PF04258.13 AID31036.1 - 8.5 5.8 9.9 1.2 8.6 1.0 2.7 3 0 0 3 3 3 0 Signal peptide peptidase BPD_transp_1 PF00528.22 AID31037.1 - 2.2e-20 73.2 19.4 2.2e-20 73.2 19.4 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID31038.1 - 1.8e-31 109.5 0.0 2.4e-31 109.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ABC_ATPase PF09818.9 AID31038.1 - 1e-05 24.5 0.0 5.9e-05 22.0 0.0 1.8 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_16 PF13191.6 AID31038.1 - 2.7e-05 24.6 0.1 4.5e-05 23.9 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 AID31038.1 - 8e-05 22.6 0.1 0.0076 16.1 0.0 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 AID31038.1 - 0.00037 20.9 0.0 0.0026 18.2 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID31038.1 - 0.0032 17.4 0.1 0.0057 16.6 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 AID31038.1 - 0.004 16.9 0.1 0.011 15.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID31038.1 - 0.0053 17.0 0.1 0.0096 16.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AID31038.1 - 0.0066 16.4 0.0 0.065 13.2 0.0 2.2 2 0 0 2 2 2 1 NACHT domain NTPase_1 PF03266.15 AID31038.1 - 0.0096 15.8 0.0 0.083 12.8 0.0 2.0 2 0 0 2 2 2 1 NTPase AAA_22 PF13401.6 AID31038.1 - 0.011 15.9 0.1 0.018 15.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID31038.1 - 0.012 15.5 0.0 0.028 14.4 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain RNA_helicase PF00910.22 AID31038.1 - 0.016 15.6 0.0 0.025 15.0 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 AID31038.1 - 0.02 15.1 0.2 0.05 13.8 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID31038.1 - 0.021 14.5 0.1 0.053 13.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 AID31038.1 - 0.033 13.8 0.1 0.13 11.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 AID31038.1 - 0.036 14.0 0.0 0.083 12.8 0.0 1.6 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea PduV-EutP PF10662.9 AID31038.1 - 0.055 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_23 PF13476.6 AID31038.1 - 0.059 13.9 0.0 0.094 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 AID31038.1 - 0.067 13.1 0.0 0.84 9.5 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 AID31038.1 - 0.078 12.1 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_18 PF13238.6 AID31038.1 - 0.095 13.2 0.1 0.18 12.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain Poly_export PF02563.16 AID31038.1 - 0.1 12.8 0.0 2.2 8.6 0.0 2.3 2 0 0 2 2 2 0 Polysaccharide biosynthesis/export protein MMR_HSR1 PF01926.23 AID31038.1 - 0.11 12.6 0.0 0.28 11.3 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase MCM PF00493.23 AID31038.1 - 0.11 11.5 0.0 0.27 10.3 0.0 1.6 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 AID31038.1 - 0.12 12.3 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 AID31038.1 - 0.17 11.5 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_15 PF13175.6 AID31038.1 - 0.19 11.4 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 AID31038.1 - 0.19 11.8 0.0 0.44 10.6 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_13 PF13166.6 AID31038.1 - 0.25 10.0 0.0 0.33 9.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain Cupin_2 PF07883.11 AID31039.1 - 2.8e-18 65.4 0.4 3.9e-18 64.9 0.4 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 AID31039.1 - 2.4e-12 46.7 0.0 2.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Cupin 3-HAO PF06052.12 AID31039.1 - 3.3e-05 23.6 0.0 3.9e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyanthranilic acid dioxygenase Cupin_3 PF05899.12 AID31039.1 - 0.00033 20.3 0.0 0.00079 19.1 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 AID31039.1 - 0.0048 16.8 0.1 0.0074 16.2 0.1 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_4 PF08007.12 AID31039.1 - 0.0057 16.2 0.0 0.007 15.9 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein Pirin_C PF05726.13 AID31039.1 - 0.0071 16.7 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain CENP-C_C PF11699.8 AID31039.1 - 0.008 16.4 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Pirin PF02678.16 AID31039.1 - 0.0081 16.1 0.1 0.01 15.8 0.1 1.2 1 0 0 1 1 1 1 Pirin ARD PF03079.14 AID31039.1 - 0.12 12.5 0.1 0.18 11.9 0.1 1.2 1 0 0 1 1 1 0 ARD/ARD' family FlgD_ig PF13860.6 AID31040.1 - 0.11 12.3 0.1 0.34 10.8 0.1 1.8 1 1 0 1 1 1 0 FlgD Ig-like domain Amidohydro_1 PF01979.20 AID31042.1 - 1e-27 97.4 0.0 1.7e-27 96.6 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID31042.1 - 1.7e-14 54.2 2.6 2.4e-06 27.3 0.3 3.1 1 1 1 2 2 2 2 Amidohydrolase family Peptidase_M20 PF01546.28 AID31043.1 - 2.2e-41 141.9 0.9 2.9e-41 141.5 0.9 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID31043.1 - 2.2e-05 24.3 0.0 0.0001 22.2 0.0 2.0 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 AID31043.1 - 0.0026 17.5 0.0 0.0068 16.1 0.0 1.6 1 1 1 2 2 2 1 Peptidase family M28 CAP18_C PF12153.8 AID31043.1 - 2.6 8.0 4.1 2 8.3 2.0 1.9 2 0 0 2 2 2 0 LPS binding domain of CAP18 (C terminal) Aminotran_3 PF00202.21 AID31044.1 - 5.5e-100 334.9 0.0 6.3e-100 334.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 AID31044.1 - 0.0024 17.1 0.0 0.0084 15.3 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 AID31044.1 - 0.0048 16.2 0.0 0.0075 15.6 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase TetR_C_3 PF08362.11 AID31045.1 - 1.5e-58 196.8 0.0 1.9e-58 196.5 0.0 1.1 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region TetR_N PF00440.23 AID31045.1 - 2.4e-14 52.8 0.1 3.9e-14 52.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_10 PF04967.12 AID31045.1 - 0.12 12.2 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain HTH_24 PF13412.6 AID31045.1 - 0.13 11.9 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MLTR_LBD PF17765.1 AID31046.1 - 6.1e-45 153.4 1.9 1.1e-44 152.5 1.9 1.3 1 0 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain HTH_31 PF13560.6 AID31046.1 - 7.3e-17 61.5 5.0 2.6e-16 59.7 5.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID31046.1 - 0.059 13.4 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix adh_short PF00106.25 AID31047.1 - 9.5e-38 129.6 2.1 2.8e-37 128.1 2.1 1.7 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31047.1 - 1.3e-24 87.1 3.9 2.6e-24 86.1 3.9 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31047.1 - 6.4e-09 36.0 0.7 1.3e-08 35.0 0.7 1.5 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31047.1 - 0.008 15.7 0.7 0.013 15.0 0.5 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family adh_short_C2 PF13561.6 AID31048.1 - 3.3e-33 115.2 0.0 4e-33 114.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31048.1 - 9.3e-22 77.4 0.0 1.1e-21 77.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31048.1 - 5.1e-05 23.3 0.1 7.3e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 KR domain Eno-Rase_NADH_b PF12242.8 AID31048.1 - 0.052 13.3 0.0 0.42 10.4 0.1 2.3 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ApbA PF02558.16 AID31048.1 - 0.14 11.8 0.3 0.31 10.7 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 AID31048.1 - 0.3 10.4 0.1 0.3 10.4 0.1 1.6 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DoxX PF07681.12 AID31049.1 - 1.8e-11 44.5 16.9 1.8e-11 44.5 16.9 1.5 2 0 0 2 2 2 1 DoxX HR_lesion PF05514.11 AID31049.1 - 0.00049 20.3 1.8 0.00053 20.2 0.4 1.7 1 1 1 2 2 2 1 HR-like lesion-inducing Smim3 PF17307.2 AID31049.1 - 0.0073 15.8 0.8 0.012 15.1 0.8 1.3 1 0 0 1 1 1 1 Small integral membrane protein 3 SURF4 PF02077.15 AID31049.1 - 0.011 15.4 1.0 0.018 14.7 0.6 1.3 1 1 0 1 1 1 0 SURF4 family DUF3937 PF13073.6 AID31049.1 - 0.035 14.2 0.2 0.059 13.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) DUF3742 PF12553.8 AID31049.1 - 0.042 14.0 3.4 0.05 13.7 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) QCR10 PF09796.9 AID31049.1 - 2.5 8.2 4.6 3.3 7.8 1.0 2.5 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) CMD PF02627.20 AID31050.1 - 1.3e-20 73.3 0.1 2.6e-20 72.3 0.1 1.5 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family CRS1_YhbY PF01985.21 AID31050.1 - 0.00043 20.4 0.0 0.00071 19.7 0.0 1.3 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Rrf2 PF02082.20 AID31051.1 - 8.9e-21 74.0 0.1 1.7e-20 73.2 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator DUF934 PF06073.12 AID31051.1 - 0.0015 18.4 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF934) HrcA_DNA-bdg PF03444.15 AID31051.1 - 0.0017 18.0 0.0 0.0033 17.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_20 PF12840.7 AID31051.1 - 0.027 14.5 0.0 0.068 13.2 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 AID31051.1 - 0.083 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 HTH domain DHO_dh PF01180.21 AID31052.1 - 1.1e-25 90.5 0.0 1.6e-25 90.0 0.0 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Fer4_21 PF14697.6 AID31052.1 - 6.7e-24 83.8 17.2 1.8e-23 82.4 16.8 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 AID31052.1 - 5.8e-09 35.4 17.0 9.1e-05 22.1 5.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Dus PF01207.17 AID31052.1 - 1.1e-07 31.3 0.1 5.9e-07 28.9 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) Fer4_6 PF12837.7 AID31052.1 - 5.1e-07 29.5 21.3 1.1e-05 25.2 2.6 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 AID31052.1 - 1.7e-06 28.5 12.0 2.5e-06 28.0 10.9 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID31052.1 - 1.7e-06 27.8 13.5 0.0023 17.9 3.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 AID31052.1 - 2.2e-05 25.2 4.2 0.066 14.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 AID31052.1 - 4.6e-05 23.9 3.0 0.093 13.3 0.3 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID31052.1 - 8.1e-05 22.7 16.2 0.00088 19.3 15.0 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 AID31052.1 - 8.2e-05 22.8 15.6 0.016 15.6 2.9 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 AID31052.1 - 0.00041 20.5 14.3 0.0017 18.5 13.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain NMO PF03060.15 AID31052.1 - 0.0015 18.0 0.2 0.0079 15.6 0.3 1.9 2 0 0 2 2 2 1 Nitronate monooxygenase Fer4_8 PF13183.6 AID31052.1 - 0.011 16.2 13.8 0.15 12.5 12.8 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 AID31052.1 - 0.039 14.5 13.3 0.3 11.7 1.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 AID31052.1 - 0.42 11.6 15.6 0.34 11.9 4.3 2.5 1 1 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 AID31052.1 - 0.52 11.1 11.0 1.5 9.6 1.6 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 AID31052.1 - 1.1 9.5 15.8 0.16 12.2 5.0 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Methyltransf_11 PF08241.12 AID31053.1 - 3.3e-19 69.3 0.0 6.1e-19 68.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID31053.1 - 2.2e-17 63.5 0.1 4e-17 62.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID31053.1 - 8.4e-14 51.6 0.0 1.2e-13 51.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID31053.1 - 2.6e-12 46.6 0.0 3.5e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 AID31053.1 - 1.1e-09 38.9 0.0 1.9e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31053.1 - 2.1e-09 37.5 0.0 2.9e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID31053.1 - 4.6e-07 29.4 0.0 7.2e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DOT1 PF08123.13 AID31053.1 - 0.00044 19.8 0.0 0.00064 19.3 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 AadA_C PF18280.1 AID31053.1 - 0.056 13.6 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 Aminoglycoside adenyltransferase C-terminal domain Ski2_N PF17911.1 AID31053.1 - 0.056 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Ski2 N-terminal region MTS PF05175.14 AID31053.1 - 0.067 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_8 PF05148.15 AID31053.1 - 0.1 12.4 0.0 0.18 11.6 0.0 1.5 1 1 0 1 1 1 0 Hypothetical methyltransferase Fer4_20 PF14691.6 AID31054.1 - 1.2e-35 121.7 0.5 1.9e-35 121.1 0.5 1.2 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 AID31054.1 - 8.5e-32 110.6 9.1 1.2e-31 110.1 9.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID31054.1 - 2.7e-12 47.1 1.2 0.0001 22.8 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID31054.1 - 2.3e-10 40.5 0.6 2.3e-10 40.5 0.6 2.5 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID31054.1 - 4.1e-09 36.1 1.2 0.0005 19.4 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID31054.1 - 4.7e-08 33.0 4.7 9.6e-07 28.7 0.6 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 AID31054.1 - 1e-07 31.7 0.2 1.5e-07 31.1 0.2 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 AID31054.1 - 3.5e-07 29.6 0.5 3.5e-07 29.6 0.5 2.6 2 1 1 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 AID31054.1 - 3.9e-07 29.8 8.2 4.4e-06 26.3 1.9 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID31054.1 - 1.3e-06 28.0 0.1 2.2e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 AID31054.1 - 6.3e-06 25.5 4.0 0.00022 20.4 0.3 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID31054.1 - 7e-06 25.5 4.5 0.0059 15.9 0.5 2.5 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 AID31054.1 - 7.7e-06 24.9 0.5 7.7e-06 24.9 0.5 2.0 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.12 AID31054.1 - 6.9e-05 22.1 1.0 0.00013 21.1 0.1 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 AID31054.1 - 8e-05 22.1 0.3 0.0002 20.8 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 AID31054.1 - 9.8e-05 21.7 0.1 9.8e-05 21.7 0.1 2.0 2 1 0 3 3 2 1 Thi4 family ApbA PF02558.16 AID31054.1 - 0.00014 21.5 0.8 0.00095 18.8 0.1 2.4 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 AID31054.1 - 0.00036 20.9 0.5 0.048 14.1 0.0 2.7 3 0 0 3 3 2 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 AID31054.1 - 0.0012 18.7 0.3 0.0028 17.6 0.3 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 AID31054.1 - 0.011 15.7 0.1 0.011 15.7 0.1 1.9 2 0 0 2 2 1 0 FAD-NAD(P)-binding Fer4_7 PF12838.7 AID31054.1 - 0.026 15.1 0.3 0.026 15.1 0.3 3.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain Shikimate_DH PF01488.20 AID31054.1 - 0.03 14.4 0.0 6.1 6.9 0.0 2.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 AID31054.1 - 0.041 14.0 0.1 0.11 12.7 0.1 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 AID31054.1 - 0.05 14.2 0.7 0.33 11.6 0.0 2.4 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Fer4_10 PF13237.6 AID31054.1 - 0.062 13.4 7.4 0.28 11.3 7.6 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain TrkA_N PF02254.18 AID31054.1 - 0.069 13.4 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain XdhC_C PF13478.6 AID31054.1 - 0.072 13.6 0.3 0.48 10.9 0.0 2.1 2 0 0 2 2 2 0 XdhC Rossmann domain DUF364 PF04016.12 AID31054.1 - 0.083 12.5 0.0 0.26 10.9 0.0 1.8 2 0 0 2 2 2 0 Putative heavy-metal chelation YjeF_N PF03853.15 AID31054.1 - 0.091 12.6 0.8 0.21 11.5 0.1 1.9 2 0 0 2 2 2 0 YjeF-related protein N-terminus UDPG_MGDP_dh_N PF03721.14 AID31054.1 - 0.093 12.3 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FMO-like PF00743.19 AID31054.1 - 0.096 11.1 0.0 8.7 4.6 0.0 2.1 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like IlvN PF07991.12 AID31054.1 - 0.1 12.2 1.5 0.17 11.5 0.1 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain K_oxygenase PF13434.6 AID31054.1 - 0.12 11.5 0.0 7.1 5.7 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_Gly3P_dh_N PF01210.23 AID31054.1 - 0.14 12.1 0.1 0.31 11.0 0.1 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Fer4_9 PF13187.6 AID31054.1 - 0.25 11.5 6.3 0.59 10.3 0.1 2.9 2 1 0 2 2 2 0 4Fe-4S dicluster domain Trp_halogenase PF04820.14 AID31054.1 - 0.72 8.6 3.8 0.23 10.2 0.2 1.8 2 0 0 2 2 2 0 Tryptophan halogenase ChaC PF04752.12 AID31055.1 - 2.4e-54 184.1 0.0 3e-54 183.8 0.0 1.1 1 0 0 1 1 1 1 ChaC-like protein GGACT PF06094.12 AID31055.1 - 0.12 12.9 0.0 0.18 12.4 0.0 1.3 1 0 0 1 1 1 0 Gamma-glutamyl cyclotransferase, AIG2-like Glyoxalase_6 PF18029.1 AID31056.1 - 4.2e-15 56.5 0.0 2e-06 28.5 0.0 2.3 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase PF00903.25 AID31056.1 - 1.6e-12 47.8 0.0 6.8e-05 23.1 0.0 2.9 2 2 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID31056.1 - 0.0016 18.7 0.3 2.9 8.2 0.0 3.8 2 2 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF4148 PF13663.6 AID31057.1 - 0.091 13.0 0.1 0.091 13.0 0.1 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4148) DoxX PF07681.12 AID31058.1 - 1.2e-13 51.5 8.4 1.2e-13 51.5 8.4 1.9 2 1 0 2 2 2 1 DoxX DoxD PF04173.13 AID31058.1 - 0.0037 17.2 0.5 0.008 16.1 0.5 1.6 1 1 0 1 1 1 1 TQO small subunit DoxD DoxX_2 PF13564.6 AID31058.1 - 2.9 8.1 9.4 4.7 7.4 7.7 2.3 1 1 2 3 3 3 0 DoxX-like family GCV_T PF01571.21 AID31059.1 - 7.7e-64 215.5 0.0 1.3e-63 214.8 0.0 1.4 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID31059.1 - 2.5e-57 195.0 2.5 3.8e-57 194.5 2.5 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAO_M PF16350.5 AID31059.1 - 4.4e-16 58.9 0.1 9.4e-16 57.9 0.1 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain GCV_T_C PF08669.11 AID31059.1 - 5.4e-16 58.3 0.0 2e-15 56.5 0.0 2.0 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID31059.1 - 2.7e-07 30.8 0.0 5.1e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family Pyr_redox_3 PF13738.6 AID31059.1 - 7.5e-06 25.4 0.0 0.0039 16.5 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID31059.1 - 6.5e-05 22.3 0.6 0.013 14.8 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID31059.1 - 0.00054 19.2 0.9 0.0012 18.0 0.9 1.7 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 AID31059.1 - 0.003 17.6 2.1 0.065 13.2 0.2 2.6 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID31059.1 - 0.0034 17.6 0.5 0.031 14.5 0.3 2.8 1 1 1 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID31059.1 - 0.013 16.0 0.4 0.13 12.8 0.3 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID31059.1 - 0.063 12.5 0.4 0.59 9.3 0.1 2.1 2 0 0 2 2 2 0 Thi4 family AlaDh_PNT_C PF01262.21 AID31059.1 - 0.067 12.5 0.3 0.15 11.3 0.1 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 AID31059.1 - 0.072 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 AID31059.1 - 0.087 12.5 0.1 0.26 10.9 0.1 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 AID31059.1 - 0.097 12.9 0.0 0.24 11.7 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain ThiF PF00899.21 AID31059.1 - 0.11 11.8 0.3 0.2 11.0 0.3 1.3 1 0 0 1 1 1 0 ThiF family MTTB PF06253.11 AID31060.1 - 1e-120 403.1 5.7 1.2e-120 402.9 5.7 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.11 AID31061.1 - 1.6e-83 280.4 0.1 1.8e-83 280.2 0.1 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) SLT PF01464.20 AID31062.1 - 2.6e-05 23.8 0.0 3.7e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase SLT domain Glucosaminidase PF01832.20 AID31062.1 - 0.11 13.0 0.7 0.21 12.1 0.5 1.7 1 1 0 1 1 1 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABC_tran PF00005.27 AID31063.1 - 2.5e-58 196.4 0.3 1e-28 100.5 0.1 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 AID31063.1 - 6.1e-34 116.4 0.1 5.9e-17 62.0 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID31063.1 - 2.9e-13 50.3 0.4 0.0012 18.8 0.1 4.1 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31063.1 - 6.2e-11 42.1 3.0 1e-05 25.1 0.2 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID31063.1 - 3.6e-07 30.7 0.9 0.0039 17.6 0.2 2.6 2 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 AID31063.1 - 2e-06 27.8 1.4 0.00035 20.5 0.2 2.3 2 0 0 2 2 2 1 RsgA GTPase NB-ARC PF00931.22 AID31063.1 - 3.2e-05 23.2 0.2 0.22 10.7 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_29 PF13555.6 AID31063.1 - 3.9e-05 23.3 0.5 0.086 12.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain ATP-synt_ab PF00006.25 AID31063.1 - 4e-05 23.4 0.1 0.015 15.0 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 AID31063.1 - 0.00013 22.3 1.0 0.45 10.9 0.1 2.5 2 0 0 2 2 2 2 RNA helicase MMR_HSR1 PF01926.23 AID31063.1 - 0.00015 21.8 2.3 0.016 15.3 0.4 2.7 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 AID31063.1 - 0.0002 21.6 4.7 0.031 14.5 0.7 3.2 3 1 0 3 3 2 1 AAA domain AAA_23 PF13476.6 AID31063.1 - 0.00023 21.7 0.5 0.033 14.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 AID31063.1 - 0.00075 19.5 1.4 0.13 12.1 0.1 2.6 2 0 0 2 2 2 1 NACHT domain Sigma54_activat PF00158.26 AID31063.1 - 0.0011 18.7 1.6 0.026 14.2 0.1 2.7 3 0 0 3 3 2 1 Sigma-54 interaction domain AAA_25 PF13481.6 AID31063.1 - 0.0012 18.4 0.2 0.5 9.9 0.2 2.5 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 AID31063.1 - 0.0022 18.6 0.2 1.1 9.8 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 AID31063.1 - 0.0029 17.8 0.6 0.62 10.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 AID31063.1 - 0.0029 17.7 3.3 0.13 12.3 0.2 2.7 3 0 0 3 3 3 1 Helicase HerA, central domain AAA_7 PF12775.7 AID31063.1 - 0.0031 17.1 0.9 0.55 9.7 0.1 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 AID31063.1 - 0.0034 17.1 0.7 0.075 12.8 0.1 2.7 3 0 0 3 3 3 1 IstB-like ATP binding protein PRK PF00485.18 AID31063.1 - 0.0036 17.1 2.2 1.2 8.9 0.2 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA PF00004.29 AID31063.1 - 0.0043 17.5 0.3 1.3 9.4 0.0 3.0 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID31063.1 - 0.0062 16.5 0.6 0.51 10.3 0.1 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID31063.1 - 0.0086 15.5 0.7 0.032 13.6 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.9 AID31063.1 - 0.013 14.3 0.1 0.6 8.8 0.0 3.2 3 1 0 3 3 3 0 Predicted ATPase of the ABC class AAA_24 PF13479.6 AID31063.1 - 0.015 15.0 0.7 0.74 9.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 AID31063.1 - 0.018 15.0 0.7 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_13 PF13166.6 AID31063.1 - 0.022 13.4 0.9 0.15 10.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain CbiA PF01656.23 AID31063.1 - 0.023 14.8 1.1 0.95 9.5 0.2 2.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Roc PF08477.13 AID31063.1 - 0.024 14.8 0.9 0.51 10.6 0.1 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 AID31063.1 - 0.03 14.2 0.2 23 4.8 0.0 3.1 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea Sigma54_activ_2 PF14532.6 AID31063.1 - 0.034 14.3 0.2 0.27 11.4 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.15 AID31063.1 - 0.038 13.9 1.3 1.8 8.5 0.0 2.3 2 0 0 2 2 2 0 NTPase tRNA_lig_kinase PF08303.11 AID31063.1 - 0.11 12.6 0.0 5.7 7.0 0.0 2.5 2 0 0 2 2 2 0 tRNA ligase kinase domain MobB PF03205.14 AID31063.1 - 0.18 11.7 1.4 11 5.9 0.3 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase PF06745.13 AID31063.1 - 0.21 10.9 3.9 2.3 7.5 0.1 2.8 3 0 0 3 3 3 0 KaiC AAA_15 PF13175.6 AID31063.1 - 0.26 11.0 1.4 1.9 8.1 0.0 2.4 2 1 1 3 3 3 0 AAA ATPase domain PduV-EutP PF10662.9 AID31063.1 - 0.32 10.7 1.0 1.4 8.6 0.1 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Zeta_toxin PF06414.12 AID31063.1 - 0.33 10.2 2.2 6.9 5.9 0.1 2.6 3 0 0 3 3 3 0 Zeta toxin Septin PF00735.18 AID31063.1 - 0.33 10.2 2.7 0.54 9.5 0.2 2.0 2 0 0 2 2 2 0 Septin DUF3265 PF11665.8 AID31063.1 - 3.3 8.0 5.3 52 4.2 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3265) BPD_transp_1 PF00528.22 AID31064.1 - 1.8e-13 50.7 17.4 3.5e-12 46.4 1.6 3.3 3 0 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component DUF5325 PF17259.2 AID31064.1 - 0.033 14.0 2.1 0.66 9.9 0.0 3.2 2 0 0 2 2 2 0 Family of unknown function (DUF5325) OppC_N PF12911.7 AID31064.1 - 0.079 12.9 0.4 0.079 12.9 0.4 3.8 3 2 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C DUF1761 PF08570.10 AID31064.1 - 1.2 9.5 9.9 0.12 12.7 1.6 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1761) BPD_transp_1 PF00528.22 AID31065.1 - 3.5e-30 105.1 14.8 3.5e-30 105.1 14.8 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID31066.1 - 3.8e-70 236.8 1.0 4.4e-70 236.5 0.6 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TamB PF04357.13 AID31067.1 - 9.4e-59 199.6 58.1 3.1e-56 191.3 9.7 9.7 4 2 5 9 9 9 3 TamB, inner membrane protein subunit of TAM complex DUF2505 PF10698.9 AID31067.1 - 0.00022 21.4 13.5 3.2 7.9 0.3 6.9 6 0 0 6 6 6 3 Protein of unknown function (DUF2505) Bac_surface_Ag PF01103.23 AID31068.1 - 1.4e-63 215.3 1.9 1.4e-63 215.3 1.9 1.6 2 0 0 2 2 2 1 Surface antigen POTRA PF07244.15 AID31068.1 - 7.3e-05 23.3 1.2 0.00037 21.0 0.1 2.7 4 0 0 4 4 4 1 Surface antigen variable number repeat bMG6 PF17962.1 AID31070.1 - 9.2e-38 128.9 0.8 8.6e-36 122.5 0.3 3.5 2 0 0 2 2 2 1 Bacterial macroglobulin domain 6 bMG5 PF17972.1 AID31070.1 - 2.9e-36 124.6 0.1 5.7e-33 114.0 0.0 3.8 3 0 0 3 3 3 1 Bacterial Alpha-2-macroglobulin MG5 domain bMG3 PF11974.8 AID31070.1 - 1.1e-28 99.3 0.5 6e-28 96.9 0.1 2.6 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain bMG10 PF17973.1 AID31070.1 - 1.4e-25 90.0 0.1 3.8e-25 88.6 0.1 1.8 1 0 0 1 1 1 1 Bacterial Alpha-2-macroglobulin MG10 domain MG2 PF01835.19 AID31070.1 - 1.1e-21 77.1 0.1 1e-19 70.8 0.0 3.8 4 0 0 4 4 3 1 MG2 domain A2M_BRD PF07703.14 AID31070.1 - 2.4e-16 60.4 0.0 3.2e-14 53.5 0.0 3.1 3 0 0 3 3 3 1 Alpha-2-macroglobulin bait region domain TED_complement PF07678.14 AID31070.1 - 1.1e-10 41.1 0.1 5.1e-10 38.9 0.1 1.9 1 1 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 AID31070.1 - 1.1e-08 34.8 0.0 5.2e-08 32.6 0.0 2.2 2 0 0 2 2 2 1 Alpha-2-macroglobulin family PAN_1 PF00024.26 AID31070.1 - 2.7e-06 27.2 0.3 5.2e-06 26.3 0.3 1.4 1 0 0 1 1 1 1 PAN domain SpaA PF17802.1 AID31070.1 - 2.8e-06 27.6 0.7 0.038 14.3 0.1 3.0 2 0 0 2 2 2 2 Prealbumin-like fold domain PAN_2 PF08276.11 AID31070.1 - 0.00022 21.3 1.0 0.0005 20.1 1.0 1.5 1 0 0 1 1 1 1 PAN-like domain PAN_4 PF14295.6 AID31070.1 - 0.00047 20.0 2.0 0.0013 18.6 2.0 1.7 1 0 0 1 1 1 1 PAN domain CarboxypepD_reg PF13620.6 AID31070.1 - 0.0047 17.2 0.7 0.17 12.2 0.1 3.8 3 0 0 3 3 3 1 Carboxypeptidase regulatory-like domain TPR_2 PF07719.17 AID31070.1 - 0.013 15.5 1.2 13 6.2 0.0 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 AID31070.1 - 0.075 13.6 0.1 0.31 11.6 0.1 2.1 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 AID31070.1 - 0.18 12.7 12.0 0.39 11.7 0.2 4.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Transgly PF00912.22 AID31071.1 - 2e-47 160.9 0.0 2.8e-47 160.5 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase BiPBP_C PF06832.12 AID31071.1 - 3.2e-23 81.6 0.2 9.3e-23 80.1 0.2 1.8 1 0 0 1 1 1 1 Penicillin-Binding Protein C-terminus Family Transpeptidase PF00905.22 AID31071.1 - 5.4e-17 62.0 0.0 2e-16 60.1 0.0 1.9 2 1 0 2 2 2 1 Penicillin binding protein transpeptidase domain Peptidase_M15 PF01427.17 AID31072.1 - 5.9e-22 78.4 0.0 2.6e-21 76.3 0.0 1.7 1 1 0 1 1 1 1 D-ala-D-ala dipeptidase SBP_bac_11 PF13531.6 AID31073.1 - 6.5e-45 153.7 0.5 8.4e-45 153.3 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31073.1 - 4.7e-17 62.9 9.2 6e-17 62.6 9.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID31073.1 - 2.9e-08 33.9 4.7 4.6e-08 33.2 4.7 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID31073.1 - 1e-07 31.7 0.3 1.4e-07 31.2 0.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 AID31073.1 - 0.0086 15.2 0.0 0.018 14.1 0.0 1.5 1 0 0 1 1 1 1 PBP superfamily domain DUF4817 PF16087.5 AID31073.1 - 0.036 13.9 0.1 0.072 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) BPD_transp_1 PF00528.22 AID31074.1 - 1.3e-27 96.7 14.5 1.3e-27 96.7 14.5 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID31075.1 - 9.1e-15 54.9 9.4 9.1e-15 54.9 9.4 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2273 PF10031.9 AID31075.1 - 0.067 13.2 0.8 0.067 13.2 0.8 3.4 3 0 0 3 3 3 0 Small integral membrane protein (DUF2273) DUF1418 PF07214.12 AID31075.1 - 0.21 11.5 1.5 0.3 11.0 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF4293 PF14126.6 AID31075.1 - 0.97 9.7 6.4 0.46 10.7 3.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) ABC_tran PF00005.27 AID31076.1 - 3.7e-37 127.9 0.0 9.8e-37 126.5 0.0 1.7 2 0 0 2 2 1 1 ABC transporter TOBE_3 PF12857.7 AID31076.1 - 1.8e-11 43.7 2.3 3e-11 43.0 0.9 2.2 2 0 0 2 2 1 1 TOBE-like domain AAA_21 PF13304.6 AID31076.1 - 4.2e-11 43.2 0.3 0.00012 22.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31076.1 - 4.9e-06 26.1 0.0 2.8e-05 23.7 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 AID31076.1 - 2.1e-05 25.0 0.1 0.00016 22.2 0.0 2.4 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA_16 PF13191.6 AID31076.1 - 8e-05 23.1 0.6 0.00018 22.0 0.6 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 AID31076.1 - 0.00017 21.4 0.0 0.0095 15.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID31076.1 - 0.00048 20.4 0.6 0.0069 16.7 0.6 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID31076.1 - 0.00089 19.7 0.1 0.014 15.8 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID31076.1 - 0.0015 18.3 0.0 0.003 17.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID31076.1 - 0.0048 17.4 0.0 0.0082 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID31076.1 - 0.0055 17.3 0.0 0.026 15.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AID31076.1 - 0.0073 16.2 0.2 0.041 13.8 0.0 2.0 2 0 0 2 2 2 1 NACHT domain SbcCD_C PF13558.6 AID31076.1 - 0.014 15.6 0.1 0.084 13.1 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 AID31076.1 - 0.015 14.1 0.5 0.74 8.5 0.0 2.8 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 AID31076.1 - 0.016 15.3 0.3 0.07 13.3 0.3 2.1 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 AID31076.1 - 0.017 15.3 0.0 2.7 8.2 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 AID31076.1 - 0.023 14.9 1.0 0.095 12.9 1.0 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID31076.1 - 0.024 14.6 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 AID31076.1 - 0.026 14.1 3.0 0.71 9.4 3.0 2.4 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID31076.1 - 0.032 14.2 0.0 0.29 11.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 AID31076.1 - 0.034 14.2 0.0 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 AID31076.1 - 0.038 13.7 0.1 0.14 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 AID31076.1 - 0.04 13.0 0.0 0.56 9.2 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein G-alpha PF00503.20 AID31076.1 - 0.053 12.7 0.0 0.055 12.6 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit DLIC PF05783.11 AID31076.1 - 0.11 11.3 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_15 PF13175.6 AID31076.1 - 0.12 12.0 0.0 0.34 10.6 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain TniB PF05621.11 AID31076.1 - 0.13 11.7 0.0 5.6 6.3 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein cobW PF02492.19 AID31076.1 - 0.15 11.6 0.0 0.31 10.6 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 AID31076.1 - 0.15 12.0 0.1 5.4 6.9 0.0 2.2 2 0 0 2 2 2 0 NTPase ATPase PF06745.13 AID31076.1 - 0.15 11.4 0.0 16 4.7 0.0 2.1 2 0 0 2 2 2 0 KaiC TsaE PF02367.17 AID31076.1 - 0.2 11.7 0.0 0.38 10.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PIN PF01850.21 AID31077.1 - 2.2e-14 54.0 0.0 2.5e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF4411 PF14367.6 AID31077.1 - 0.017 15.1 0.0 0.14 12.0 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4411) PIN_3 PF13470.6 AID31077.1 - 0.057 14.2 0.0 0.059 14.1 0.0 1.2 1 1 0 1 1 1 0 PIN domain MazE_antitoxin PF04014.18 AID31078.1 - 5.9e-09 35.6 0.7 1.1e-08 34.7 0.7 1.5 1 1 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin SBP_bac_11 PF13531.6 AID31079.1 - 3.4e-39 134.9 0.2 4.4e-39 134.6 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31079.1 - 6.2e-14 52.7 3.2 6.2e-14 52.7 3.2 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID31079.1 - 3.3e-09 36.5 0.1 5.5e-09 35.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 AID31079.1 - 0.0015 17.7 0.1 0.0043 16.2 0.1 1.9 1 1 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 AID31079.1 - 0.033 13.9 2.5 1.6 8.3 0.2 2.8 2 1 0 2 2 2 0 PBP superfamily domain Ribosomal_S9 PF00380.19 AID31079.1 - 0.12 12.9 0.0 0.28 11.7 0.0 1.6 2 0 0 2 2 2 0 Ribosomal protein S9/S16 ALF PF03752.13 AID31079.1 - 0.25 11.3 2.3 5.8 7.0 0.1 2.9 2 0 0 2 2 2 0 Short repeats of unknown function Rrf2 PF02082.20 AID31080.1 - 1.8e-23 82.7 0.0 2.6e-23 82.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator TrmB PF01978.19 AID31080.1 - 0.008 16.0 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB SKI PF01202.22 AID31081.1 - 1.5e-10 41.4 0.0 1.7e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 AID31081.1 - 4.3e-08 33.4 0.0 5.7e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID31081.1 - 0.00041 20.9 0.0 0.00076 20.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31081.1 - 0.0016 18.8 0.0 0.0017 18.7 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.6 AID31081.1 - 0.017 15.6 0.0 0.03 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain IPT PF01745.16 AID31081.1 - 0.022 14.2 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase DUF2075 PF09848.9 AID31081.1 - 0.029 13.6 0.0 0.034 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 AID31081.1 - 0.088 12.5 0.3 0.12 12.1 0.3 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Thymidylate_kin PF02223.17 AID31081.1 - 0.096 12.4 0.0 0.92 9.2 0.0 2.1 2 0 0 2 2 2 0 Thymidylate kinase Zeta_toxin PF06414.12 AID31081.1 - 0.26 10.6 0.2 0.5 9.6 0.1 1.6 2 0 0 2 2 2 0 Zeta toxin BPD_transp_2 PF02653.16 AID31082.1 - 7.1e-42 143.4 45.1 1.1e-41 142.8 45.1 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID31083.1 - 3.4e-37 128.1 41.2 3.4e-37 128.1 41.2 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID31084.1 - 7.2e-46 156.1 0.0 2.4e-27 96.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31084.1 - 1.1e-05 25.4 0.0 0.051 13.4 0.0 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31084.1 - 0.00014 21.3 0.1 0.2 11.1 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID31084.1 - 0.00071 19.3 0.1 0.0016 18.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID31084.1 - 0.0061 16.3 1.7 0.035 13.8 1.7 2.1 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID31084.1 - 0.0076 16.8 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31084.1 - 0.0094 16.3 0.1 0.022 15.1 0.1 1.6 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID31084.1 - 0.022 14.7 0.1 0.1 12.5 0.1 2.1 2 0 0 2 2 2 0 RsgA GTPase DLIC PF05783.11 AID31084.1 - 0.036 12.9 0.0 1.4 7.7 0.1 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) AAA_25 PF13481.6 AID31084.1 - 0.047 13.2 1.3 0.44 10.1 1.3 2.2 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID31084.1 - 0.057 13.9 0.5 0.74 10.2 0.5 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID31084.1 - 0.062 13.6 1.2 3.7 7.8 0.2 2.4 2 0 0 2 2 2 0 AAA domain Peripla_BP_4 PF13407.6 AID31085.1 - 2.4e-39 135.5 12.0 3e-39 135.2 12.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID31085.1 - 0.068 12.6 0.3 0.15 11.5 0.2 1.6 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family DUF2242 PF10001.9 AID31085.1 - 0.17 12.0 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2242) Peripla_BP_3 PF13377.6 AID31086.1 - 1.5e-31 109.9 0.0 3.4e-31 108.8 0.0 1.6 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID31086.1 - 4.1e-21 75.6 0.0 5e-21 75.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID31086.1 - 1.8e-16 59.7 0.1 3.1e-16 58.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID31086.1 - 5.1e-14 52.5 0.0 7.7e-14 51.9 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain MFS_1 PF07690.16 AID31087.1 - 1.5e-34 119.5 69.9 7.1e-23 81.1 36.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID31087.1 - 3.2e-08 33.3 37.4 4.4e-08 32.8 37.4 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 AID31087.1 - 0.2 10.5 13.3 0.36 9.6 12.9 1.8 1 1 0 1 1 1 0 MFS_1 like family DUF3175 PF11373.8 AID31088.1 - 6.9e-45 151.1 1.4 7.8e-45 151.0 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3175) FCD PF07729.12 AID31089.1 - 1.9e-19 70.3 9.5 3.2e-19 69.6 9.5 1.4 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID31089.1 - 3.2e-12 45.9 0.0 6e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Epimerase PF01370.21 AID31090.1 - 5.5e-25 88.2 0.1 4.2e-24 85.3 0.1 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID31090.1 - 1.6e-16 60.6 0.0 1.6e-15 57.4 0.0 2.2 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID31090.1 - 1.3e-11 44.1 0.0 5.5e-11 42.0 0.0 1.8 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 AID31090.1 - 2e-10 40.3 0.0 1e-06 28.1 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID31090.1 - 4.1e-08 32.7 0.0 1.8e-07 30.6 0.0 1.9 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 AID31090.1 - 1.5e-07 30.9 0.0 3.3e-07 29.7 0.0 1.5 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 AID31090.1 - 5.6e-06 26.4 0.0 8.6e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_2 PF03446.15 AID31091.1 - 4.7e-40 137.3 0.0 6.2e-40 136.9 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 AID31091.1 - 5.5e-14 52.4 0.0 8.9e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 AID31091.1 - 2.4e-09 37.6 0.0 6e-09 36.4 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 AID31091.1 - 1.3e-05 24.7 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 AID31091.1 - 0.00043 20.2 0.0 0.00074 19.4 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID31091.1 - 0.0079 16.3 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 AID31091.1 - 0.033 13.8 0.0 0.059 12.9 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain FCD PF07729.12 AID31092.1 - 2e-15 57.3 8.3 2e-15 57.3 8.3 1.8 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID31092.1 - 2.4e-13 49.5 0.0 4.6e-13 48.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 AID31092.1 - 0.087 12.8 0.0 0.23 11.4 0.0 1.7 1 0 0 1 1 1 0 HTH domain DUF3606 PF12244.8 AID31092.1 - 0.13 12.3 1.6 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3606) Peripla_BP_4 PF13407.6 AID31093.1 - 2e-43 148.8 0.6 2.9e-43 148.3 0.6 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain ABC_sub_bind PF04392.12 AID31093.1 - 0.00089 18.6 0.2 0.64 9.2 0.0 2.3 2 0 0 2 2 2 2 ABC transporter substrate binding protein Peripla_BP_1 PF00532.21 AID31093.1 - 0.001 18.6 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family ABC_tran PF00005.27 AID31094.1 - 2.1e-33 115.7 0.0 2.8e-33 115.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID31094.1 - 1e-08 34.9 0.0 1.8e-08 34.1 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID31094.1 - 4.5e-08 33.3 0.1 0.00047 20.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 AID31094.1 - 1.8e-06 27.1 0.9 0.00018 20.4 0.5 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA PF00004.29 AID31094.1 - 1.5e-05 25.5 0.2 0.00021 21.7 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID31094.1 - 0.0016 18.1 0.1 0.0045 16.7 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31094.1 - 0.002 18.1 0.1 0.005 16.8 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 AID31094.1 - 0.0021 18.4 0.5 0.036 14.4 0.5 2.5 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 AID31094.1 - 0.0051 17.0 0.1 0.032 14.4 0.1 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TsaE PF02367.17 AID31094.1 - 0.016 15.2 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 AID31094.1 - 0.019 15.5 0.0 0.025 15.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID31094.1 - 0.021 14.5 0.1 1.1 9.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 AID31094.1 - 0.028 13.3 0.0 0.3 10.0 0.0 2.0 1 1 0 1 1 1 0 AAA-like domain MeaB PF03308.16 AID31094.1 - 0.033 13.2 0.7 0.13 11.2 0.1 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 AID31094.1 - 0.034 13.7 1.1 5.1 6.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 AID31094.1 - 0.038 13.7 2.5 0.37 10.5 2.5 2.1 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 AID31094.1 - 0.042 13.0 0.0 0.071 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 AID31094.1 - 0.064 13.4 0.2 0.27 11.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 AID31094.1 - 0.093 12.0 0.3 0.26 10.5 0.3 1.8 1 1 0 1 1 1 0 KAP family P-loop domain NB-ARC PF00931.22 AID31094.1 - 0.093 11.9 0.2 0.29 10.3 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 AID31094.1 - 0.098 12.7 0.1 0.19 11.8 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 AID31094.1 - 0.1 12.3 0.8 0.56 9.8 0.8 2.1 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Ras PF00071.22 AID31094.1 - 0.11 12.1 0.0 10 5.7 0.0 2.2 2 0 0 2 2 2 0 Ras family AAA_16 PF13191.6 AID31094.1 - 0.13 12.7 0.2 0.22 11.9 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 AID31094.1 - 0.17 11.8 0.1 0.39 10.6 0.0 1.6 2 0 0 2 2 2 0 NACHT domain BPD_transp_2 PF02653.16 AID31095.1 - 1.6e-44 152.1 47.4 1.6e-44 152.1 47.4 2.0 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component HTH_18 PF12833.7 AID31096.1 - 2.1e-19 69.6 0.1 1.2e-18 67.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31096.1 - 3.5e-10 39.7 0.1 5.5e-05 23.1 0.0 3.3 3 0 0 3 3 3 3 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 AID31096.1 - 3.9e-05 23.3 0.2 5.7e-05 22.8 0.2 1.2 1 0 0 1 1 1 1 Cupin domain Topo_Zn_Ribbon PF08272.11 AID31096.1 - 0.0031 17.1 0.0 0.0059 16.2 0.0 1.4 1 0 0 1 1 1 1 Topoisomerase I zinc-ribbon-like HTH_AsnC-type PF13404.6 AID31096.1 - 0.058 13.2 0.1 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Polyketide_cyc2 PF10604.9 AID31097.1 - 1.5e-24 86.9 0.0 1.7e-24 86.8 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 AID31097.1 - 0.00052 20.2 0.0 0.00072 19.8 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport FAD_binding_5 PF00941.21 AID31098.1 - 1.3e-23 83.6 0.3 2.1e-23 82.9 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID31098.1 - 6.7e-20 71.2 0.4 1.3e-19 70.2 0.4 1.5 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 AID31099.1 - 9.3e-30 102.5 0.0 1.7e-29 101.7 0.0 1.4 1 0 0 1 1 1 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID31099.1 - 4.8e-07 29.6 0.2 4.8e-07 29.6 0.2 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID31099.1 - 4.2e-05 23.5 1.8 4.2e-05 23.5 1.8 1.4 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.18 AID31101.1 - 1.7e-79 267.8 0.1 2.7e-79 267.1 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID31101.1 - 2.8e-30 104.9 0.1 5.8e-30 103.9 0.1 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ald_Xan_dh_C2 PF02738.18 AID31102.1 - 2.4e-58 197.9 0.9 3e-58 197.6 0.9 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase AAA_5 PF07728.14 AID31103.1 - 6.3e-14 52.1 0.0 1e-13 51.5 0.0 1.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 AID31103.1 - 3.1e-12 47.0 0.0 7.6e-12 45.8 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 AID31103.1 - 1e-08 35.1 0.0 0.00073 19.4 0.0 2.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 AID31103.1 - 1.1e-05 25.3 0.1 0.13 12.0 0.0 2.2 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 AID31103.1 - 3.4e-05 24.1 0.2 0.00011 22.5 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31103.1 - 4.2e-05 24.0 2.3 0.0005 20.5 2.3 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 AID31103.1 - 0.00079 20.0 0.0 0.0014 19.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_6 PF12774.7 AID31103.1 - 0.0014 17.7 0.0 0.002 17.1 0.0 1.2 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_19 PF13245.6 AID31103.1 - 0.0025 18.1 0.2 0.01 16.2 0.2 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 AID31103.1 - 0.0091 15.4 1.6 0.024 14.0 0.2 2.1 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 AID31103.1 - 0.013 15.2 0.0 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain NACHT PF05729.12 AID31103.1 - 0.014 15.3 1.0 0.21 11.5 0.0 2.3 2 1 0 2 2 2 0 NACHT domain AAA_2 PF07724.14 AID31103.1 - 0.015 15.5 0.0 0.029 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_30 PF13604.6 AID31103.1 - 0.048 13.4 0.1 0.16 11.7 0.1 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID31103.1 - 0.052 12.8 0.2 0.25 10.6 0.0 2.2 2 1 1 3 3 3 0 Zeta toxin TIP49 PF06068.13 AID31103.1 - 0.054 12.7 0.2 0.23 10.6 0.1 1.8 2 0 0 2 2 2 0 TIP49 P-loop domain TsaE PF02367.17 AID31103.1 - 0.058 13.4 0.1 0.16 12.0 0.1 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 AID31103.1 - 0.068 13.6 0.0 0.58 10.6 0.0 2.1 2 1 0 2 2 2 0 RNA helicase DNA_pol3_delta2 PF13177.6 AID31103.1 - 0.086 12.6 0.1 0.75 9.6 0.1 2.2 1 1 0 1 1 1 0 DNA polymerase III, delta subunit AAA_14 PF13173.6 AID31103.1 - 0.088 12.9 0.0 0.31 11.1 0.0 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID31103.1 - 0.12 12.3 0.1 0.71 9.8 0.0 2.1 2 1 0 2 2 2 0 NTPase AAA_33 PF13671.6 AID31103.1 - 0.15 12.2 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain VWA_CoxE PF05762.14 AID31105.1 - 9.2e-68 228.0 8.5 1.5e-67 227.3 8.5 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.6 AID31105.1 - 0.0011 18.9 0.2 0.0076 16.2 0.0 2.2 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 AID31105.1 - 0.0044 17.6 0.3 0.034 14.8 0.0 2.5 2 1 1 3 3 3 1 von Willebrand factor type A domain CysG_dimeriser PF10414.9 AID31105.1 - 0.014 15.1 0.5 1.1 9.0 0.1 3.0 2 0 0 2 2 2 0 Sirohaem synthase dimerisation region Amidohydro_2 PF04909.14 AID31106.1 - 5.8e-40 137.9 3.5 6.5e-40 137.7 3.5 1.0 1 0 0 1 1 1 1 Amidohydrolase SBP_bac_8 PF13416.6 AID31107.1 - 6.5e-38 131.1 2.8 8e-38 130.9 2.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31107.1 - 7.5e-28 98.4 7.5 1.3e-27 97.6 7.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID31107.1 - 0.054 13.2 0.1 1.1 9.0 0.1 2.4 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID31108.1 - 3.9e-19 69.1 14.9 3.9e-19 69.1 14.9 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component RRP14 PF15459.6 AID31108.1 - 0.028 15.0 0.1 0.052 14.2 0.1 1.4 1 0 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 BPD_transp_1 PF00528.22 AID31109.1 - 6.7e-12 45.5 17.6 6.7e-12 45.5 17.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DSRB PF10781.9 AID31109.1 - 0.023 14.3 0.1 0.043 13.5 0.1 1.4 1 0 0 1 1 1 0 Dextransucrase DSRB DUF1461 PF07314.11 AID31109.1 - 8 6.3 9.8 0.49 10.3 0.1 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF1461) ABC_tran PF00005.27 AID31110.1 - 1.7e-33 116.0 0.0 2.9e-33 115.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID31110.1 - 3.1e-14 52.9 0.1 9.3e-14 51.4 0.1 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID31110.1 - 8.5e-08 32.3 0.0 0.00089 19.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID31110.1 - 2.5e-05 24.5 0.1 7.3e-05 23.0 0.1 1.9 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.19 AID31110.1 - 0.0003 20.3 0.1 0.26 10.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 AID31110.1 - 0.00078 19.6 0.1 0.24 11.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AID31110.1 - 0.0017 18.3 0.0 0.0033 17.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID31110.1 - 0.0025 18.1 0.0 0.0056 17.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID31110.1 - 0.0026 18.2 0.0 0.061 13.8 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID31110.1 - 0.003 17.5 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 AID31110.1 - 0.0036 17.0 0.0 0.0082 15.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID31110.1 - 0.0045 17.4 0.0 0.0074 16.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain TruB_C PF09142.11 AID31110.1 - 0.0067 16.2 1.7 1.1 9.1 0.3 3.4 3 0 0 3 3 3 1 tRNA Pseudouridine synthase II, C terminal OB_MalK PF17912.1 AID31110.1 - 0.0077 17.0 0.5 0.034 15.0 0.5 2.2 1 0 0 1 1 1 1 MalK OB fold domain AAA_25 PF13481.6 AID31110.1 - 0.011 15.3 0.0 0.026 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID31110.1 - 0.019 15.2 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID31110.1 - 0.023 15.2 0.0 0.041 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID31110.1 - 0.048 13.7 0.0 0.092 12.8 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Cytidylate_kin PF02224.18 AID31110.1 - 0.059 13.1 0.1 0.15 11.8 0.1 1.5 1 1 0 1 1 1 0 Cytidylate kinase AAA_5 PF07728.14 AID31110.1 - 0.078 13.0 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 AID31110.1 - 0.096 12.4 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID31110.1 - 0.15 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 AID31110.1 - 0.16 12.5 0.1 0.23 11.9 0.1 1.1 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 AID31110.1 - 0.2 10.8 0.0 0.37 9.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 AID31110.1 - 0.25 11.7 0.0 0.44 10.9 0.0 1.4 1 0 0 1 1 1 0 RNA helicase ATPase_2 PF01637.18 AID31110.1 - 0.28 11.1 0.0 0.43 10.5 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_15 PF13175.6 AID31110.1 - 0.3 10.7 0.0 0.41 10.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Metallophos PF00149.28 AID31111.1 - 2.5e-15 57.5 0.2 3.8e-15 57.0 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID31111.1 - 2.8e-09 37.4 0.0 8.3e-09 35.8 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 AID31111.1 - 0.0072 15.4 0.1 0.044 12.8 0.0 1.9 2 0 0 2 2 2 1 PhoD-like phosphatase CMD PF02627.20 AID31112.1 - 1.3e-18 66.8 0.2 2.1e-18 66.1 0.2 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family PA26 PF04636.13 AID31112.1 - 0.15 10.9 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) ABC_tran PF00005.27 AID31113.1 - 1e-49 168.6 0.0 3.8e-29 101.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31113.1 - 7e-09 35.9 0.6 0.052 13.3 0.0 3.2 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 AID31113.1 - 3.2e-06 27.0 0.4 0.0016 18.2 0.0 2.8 2 1 1 3 3 3 2 AAA domain SMC_N PF02463.19 AID31113.1 - 0.00042 19.8 0.0 0.0011 18.5 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID31113.1 - 0.0013 18.5 0.1 0.081 12.6 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 AID31113.1 - 0.0043 17.6 0.0 0.012 16.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID31113.1 - 0.0061 16.3 0.9 0.014 15.1 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31113.1 - 0.0082 16.1 0.0 0.026 14.4 0.0 1.8 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 AID31113.1 - 0.013 14.3 1.4 0.72 8.6 0.0 3.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 AID31113.1 - 0.033 14.4 0.0 11 6.3 0.0 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA PF00004.29 AID31113.1 - 0.043 14.2 0.7 3 8.3 0.3 3.6 2 2 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Str_synth PF03088.16 AID31113.1 - 0.1 12.7 0.1 0.31 11.2 0.1 1.9 1 0 0 1 1 1 0 Strictosidine synthase AAA_13 PF13166.6 AID31113.1 - 0.12 11.0 0.0 0.19 10.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID31113.1 - 0.13 11.9 2.4 0.97 9.0 0.7 2.8 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 AID31113.1 - 0.14 12.4 0.7 6.4 7.0 0.3 3.2 2 1 0 2 2 2 0 AAA domain Str_synth PF03088.16 AID31114.1 - 0.009 16.1 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 Strictosidine synthase Reg_prop PF07494.11 AID31114.1 - 0.1 12.9 0.1 2.4 8.7 0.0 3.2 3 0 0 3 3 3 0 Two component regulator propeller NHL PF01436.21 AID31114.1 - 0.17 11.9 0.0 12 6.2 0.0 3.3 3 0 0 3 3 3 0 NHL repeat BPD_transp_2 PF02653.16 AID31115.1 - 6.5e-48 163.2 39.8 8.5e-48 162.8 39.8 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Str_synth PF03088.16 AID31115.1 - 3e-21 75.3 0.0 6.9e-21 74.2 0.0 1.7 1 0 0 1 1 1 1 Strictosidine synthase SGL PF08450.12 AID31115.1 - 2.7e-17 63.2 0.1 7.5e-17 61.7 0.1 1.7 1 1 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 AID31115.1 - 0.058 13.6 0.0 0.38 11.0 0.0 2.4 3 0 0 3 3 3 0 Arylesterase Peripla_BP_4 PF13407.6 AID31116.1 - 7e-34 117.6 3.2 7e-34 117.6 3.2 1.7 1 1 1 2 2 2 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID31116.1 - 0.00036 20.1 0.1 0.00049 19.6 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF5577 PF17740.1 AID31116.1 - 0.06 13.0 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5577) OKR_DC_1_N PF03709.15 AID31116.1 - 0.15 12.3 0.0 0.37 11.1 0.0 1.6 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain BPD_transp_2 PF02653.16 AID31117.1 - 2.9e-41 141.4 39.0 2.9e-41 141.4 39.0 1.9 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component MFS_1 PF07690.16 AID31118.1 - 2.4e-56 191.2 74.3 6.6e-47 160.1 45.8 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 AID31118.1 - 0.0006 18.3 7.4 0.0006 18.3 7.4 2.8 2 1 1 3 3 3 2 Transmembrane secretion effector OCD_Mu_crystall PF02423.15 AID31120.1 - 6.4e-61 206.0 0.0 7.5e-61 205.8 0.0 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family THF_DHG_CYH_C PF02882.19 AID31120.1 - 0.013 14.9 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Lyase_aromatic PF00221.19 AID31121.1 - 3.3e-129 431.6 16.2 3.8e-129 431.4 16.2 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase Pantoate_transf PF02548.15 AID31122.1 - 1.1e-40 139.7 0.2 5.9e-37 127.5 0.1 2.0 2 0 0 2 2 2 2 Ketopantoate hydroxymethyltransferase NanE PF04131.14 AID31122.1 - 0.087 12.0 0.0 0.18 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Rieske PF00355.26 AID31123.1 - 1.6e-19 69.6 0.2 1.9e-19 69.4 0.2 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 AID31123.1 - 2.5e-13 49.9 0.0 2.8e-13 49.7 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FA_desaturase PF00487.24 AID31124.1 - 2e-33 116.3 25.1 2e-33 116.3 25.1 1.9 1 1 1 2 2 2 2 Fatty acid desaturase AP_endonuc_2 PF01261.24 AID31125.1 - 7.1e-33 113.8 0.3 8.6e-33 113.5 0.3 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel GFO_IDH_MocA PF01408.22 AID31126.1 - 1.6e-17 64.4 0.2 2.4e-17 63.9 0.2 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID31126.1 - 0.00033 20.6 0.1 0.0011 18.9 0.1 1.9 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Rossmann-like PF10727.9 AID31126.1 - 0.0079 16.0 0.2 0.015 15.1 0.2 1.5 1 0 0 1 1 1 1 Rossmann-like domain F420_oxidored PF03807.17 AID31126.1 - 0.011 16.3 0.0 0.025 15.1 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent CoA_binding_2 PF13380.6 AID31126.1 - 0.015 15.8 0.2 0.028 14.9 0.2 1.5 1 0 0 1 1 1 0 CoA binding domain TraH_2 PF06871.11 AID31126.1 - 0.017 14.8 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 TraH_2 Shikimate_DH PF01488.20 AID31126.1 - 0.023 14.8 0.3 0.11 12.5 0.1 2.0 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF126 PF01989.16 AID31127.1 - 1.6e-31 107.9 0.1 2.2e-31 107.5 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF521 PF04412.13 AID31128.1 - 2.7e-134 447.9 0.0 3.1e-134 447.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) ABC_tran PF00005.27 AID31129.1 - 2.9e-33 115.3 0.0 4.7e-33 114.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID31129.1 - 3.9e-18 65.4 0.1 3.2e-17 62.4 0.1 2.4 2 0 0 2 2 2 1 TOBE domain AAA_23 PF13476.6 AID31129.1 - 1.8e-05 25.4 0.0 3.5e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 AID31129.1 - 4.7e-05 23.4 0.6 0.035 13.9 0.1 2.4 2 1 1 3 3 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31129.1 - 0.00068 19.1 0.0 0.011 15.2 0.0 2.4 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID31129.1 - 0.00069 19.3 0.0 0.0015 18.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID31129.1 - 0.0012 19.1 0.2 0.006 16.9 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31129.1 - 0.005 17.2 0.3 0.012 16.0 0.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID31129.1 - 0.0071 16.3 0.0 0.016 15.1 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_25 PF13481.6 AID31129.1 - 0.028 14.0 0.0 0.35 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID31129.1 - 0.03 14.3 0.1 0.051 13.5 0.1 1.3 1 0 0 1 1 1 0 NACHT domain NTPase_1 PF03266.15 AID31129.1 - 0.045 13.7 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 NTPase AAA PF00004.29 AID31129.1 - 0.057 13.9 0.0 0.35 11.3 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID31129.1 - 0.059 13.6 0.0 0.16 12.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID31129.1 - 0.083 13.0 0.2 0.25 11.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 AID31129.1 - 0.12 12.0 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 AID31129.1 - 0.13 12.8 0.0 0.79 10.3 0.0 2.2 3 0 0 3 3 3 0 AAA domain ATPase_2 PF01637.18 AID31129.1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea G-alpha PF00503.20 AID31129.1 - 0.27 10.3 0.0 0.4 9.8 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit BPD_transp_1 PF00528.22 AID31130.1 - 7.3e-17 61.7 18.3 7.3e-17 61.7 18.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5353 PF17304.2 AID31130.1 - 0.012 15.4 0.1 0.093 12.5 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5353) BPD_transp_1 PF00528.22 AID31131.1 - 4.1e-17 62.5 15.5 4.1e-17 62.5 15.5 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1101 PF06503.11 AID31131.1 - 0.086 12.1 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1101) SBP_bac_8 PF13416.6 AID31132.1 - 4.3e-35 121.9 10.6 5.7e-35 121.5 10.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID31132.1 - 3.9e-30 105.1 5.1 5.3e-30 104.6 5.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31132.1 - 3.1e-11 43.8 11.2 5.3e-11 43.0 11.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PfkB PF00294.24 AID31133.1 - 4.2e-22 78.8 0.0 5.6e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ADP_ribosyl_GH PF03747.14 AID31134.1 - 2e-54 185.3 11.2 2.3e-54 185.1 11.2 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Transgly_assoc PF04226.13 AID31134.1 - 5.9 7.2 6.9 1 9.7 0.2 3.1 3 0 0 3 3 3 0 Transglycosylase associated protein UTRA PF07702.13 AID31135.1 - 3.2e-28 98.4 0.0 4.2e-28 98.0 0.0 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 AID31135.1 - 2.5e-15 55.9 0.1 4.2e-15 55.1 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 AID31135.1 - 2.3e-05 24.0 0.1 4.5e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_20 PF12840.7 AID31135.1 - 7.1e-05 22.8 0.0 0.00049 20.1 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_41 PF14502.6 AID31135.1 - 0.00018 21.1 0.0 0.00039 20.1 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 AID31135.1 - 0.0021 18.0 0.1 0.0043 17.0 0.1 1.5 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 AID31135.1 - 0.012 16.0 0.0 0.029 14.7 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.7 AID31135.1 - 0.014 15.2 0.0 0.05 13.5 0.0 1.9 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.6 AID31135.1 - 0.04 13.9 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TBPIP PF07106.13 AID31135.1 - 0.068 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain HTH_Crp_2 PF13545.6 AID31135.1 - 0.099 12.6 0.1 0.45 10.5 0.1 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HisKA_2 PF07568.12 AID31138.1 - 2.2e-23 82.1 1.7 5.4e-23 80.9 1.7 1.7 1 0 0 1 1 1 1 Histidine kinase HATPase_c_2 PF13581.6 AID31138.1 - 5.3e-07 29.6 0.0 2.1e-06 27.7 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.26 AID31138.1 - 9.3e-07 29.3 0.1 5.2e-06 26.9 0.1 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 AID31138.1 - 0.00051 20.7 0.3 0.0018 19.0 0.3 2.0 1 0 0 1 1 1 1 HWE histidine kinase PAS_4 PF08448.10 AID31138.1 - 0.00056 20.1 0.6 0.0015 18.8 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 AID31138.1 - 0.0006 19.8 0.0 0.0015 18.5 0.0 1.7 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 AID31138.1 - 0.0073 16.5 0.0 0.016 15.4 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 AID31138.1 - 0.045 13.8 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 PAS domain CDT1_C PF16679.5 AID31138.1 - 1.2 9.7 4.7 4.4 7.8 4.8 1.8 2 0 0 2 2 2 0 DNA replication factor Cdt1 C-terminal domain Pyridox_ox_2 PF12900.7 AID31139.1 - 1.3e-15 57.7 0.0 7.9e-15 55.1 0.0 1.9 1 1 1 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 AID31139.1 - 3.3e-09 36.8 0.0 4.9e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Glyco_hydro_8 PF01270.17 AID31139.1 - 0.086 11.6 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 8 DUF3309 PF11752.8 AID31141.1 - 6.7e-13 48.5 23.9 7.4e-13 48.3 23.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3309) ICMT PF04140.14 AID31143.1 - 1.7e-05 25.2 1.4 1.7e-05 25.2 1.4 1.8 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 AID31143.1 - 1.9e-05 25.0 2.4 1.9e-05 25.0 2.4 2.1 1 1 1 2 2 2 1 Phospholipid methyltransferase DUF1295 PF06966.12 AID31143.1 - 0.049 13.2 1.4 0.089 12.3 1.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1295) Got1 PF04178.12 AID31143.1 - 0.45 10.9 9.4 28 5.2 0.0 2.9 1 1 0 2 2 2 0 Got1/Sft2-like family TPR_1 PF00515.28 AID31144.1 - 2e-143 461.0 59.7 1.7e-06 27.6 0.0 27.0 27 0 0 27 27 27 25 Tetratricopeptide repeat TPR_11 PF13414.6 AID31144.1 - 2.5e-134 436.8 98.8 2.4e-11 43.1 0.0 25.7 11 9 15 26 26 26 23 TPR repeat TPR_2 PF07719.17 AID31144.1 - 2e-121 386.6 72.4 4.7e-05 23.2 0.1 27.3 27 0 0 27 27 27 24 Tetratricopeptide repeat TPR_16 PF13432.6 AID31144.1 - 5.3e-77 254.2 114.4 1.1e-08 35.5 1.2 19.1 9 5 12 21 21 21 20 Tetratricopeptide repeat TPR_8 PF13181.6 AID31144.1 - 5.9e-70 225.7 49.3 0.0011 19.0 0.0 25.2 26 0 0 26 26 26 19 Tetratricopeptide repeat TPR_17 PF13431.6 AID31144.1 - 6.4e-70 226.6 48.5 0.0023 18.2 0.0 26.8 27 1 1 28 28 28 15 Tetratricopeptide repeat TPR_9 PF13371.6 AID31144.1 - 8.4e-59 195.7 60.0 9.9e-07 28.8 0.3 15.8 8 5 10 18 18 18 15 Tetratricopeptide repeat TPR_14 PF13428.6 AID31144.1 - 5e-41 135.9 82.9 0.016 16.0 0.3 23.9 7 7 19 26 26 26 15 Tetratricopeptide repeat TPR_19 PF14559.6 AID31144.1 - 4.6e-23 81.5 84.6 0.0022 18.4 0.0 17.8 10 6 4 17 17 17 9 Tetratricopeptide repeat TPR_7 PF13176.6 AID31144.1 - 1.1e-21 75.2 42.1 0.15 12.2 0.0 20.0 20 3 1 21 21 21 6 Tetratricopeptide repeat TPR_6 PF13174.6 AID31144.1 - 1.1e-21 75.9 52.8 0.15 12.7 0.0 20.7 21 1 1 22 22 22 3 Tetratricopeptide repeat TPR_12 PF13424.6 AID31144.1 - 1.3e-19 70.3 43.8 0.06 13.6 0.5 15.9 10 5 6 17 17 16 7 Tetratricopeptide repeat NARP1 PF12569.8 AID31144.1 - 2.3e-11 43.3 23.3 0.72 8.7 0.1 9.9 8 2 3 11 11 11 6 NMDA receptor-regulated protein 1 TPR_3 PF07720.12 AID31144.1 - 5.9e-11 42.1 10.2 0.36 10.9 0.1 10.7 9 1 0 9 9 9 1 Tetratricopeptide repeat PknG_TPR PF16918.5 AID31144.1 - 0.014 14.1 0.2 0.014 14.1 0.2 3.2 3 1 0 3 3 3 0 Protein kinase G tetratricopeptide repeat DUF5113 PF17140.4 AID31144.1 - 0.019 14.8 1.8 1e+02 2.6 0.0 5.6 5 0 0 5 5 5 0 Domain of unknown function (DUF5113) BTAD PF03704.17 AID31144.1 - 0.11 12.9 24.3 1.7 9.1 0.3 9.0 9 3 1 10 10 10 0 Bacterial transcriptional activator domain ANAPC3 PF12895.7 AID31144.1 - 0.12 12.7 11.8 41 4.5 0.0 7.3 7 0 0 7 7 7 0 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 AID31144.1 - 0.15 12.2 0.8 46 4.2 0.1 4.7 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat DUF4398 PF14346.6 AID31144.1 - 0.75 10.5 0.0 0.75 10.5 0.0 4.8 4 1 0 4 4 2 0 Domain of unknown function (DUF4398) NMT1 PF09084.11 AID31145.1 - 1.1e-63 215.0 0.1 2.5e-63 213.9 0.0 1.6 2 0 0 2 2 2 1 NMT1/THI5 like OpuAC PF04069.12 AID31145.1 - 0.03 13.9 0.2 0.12 11.9 0.0 2.0 2 1 0 2 2 2 0 Substrate binding domain of ABC-type glycine betaine transport system NMT1_2 PF13379.6 AID31145.1 - 0.081 12.6 0.2 0.37 10.4 0.0 2.0 2 0 0 2 2 2 0 NMT1-like family Abhydrolase_4 PF08386.10 AID31145.1 - 0.13 12.4 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein ABC_tran PF00005.27 AID31146.1 - 9.5e-26 90.9 0.0 1.3e-25 90.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID31146.1 - 0.0016 18.4 0.1 0.12 12.2 0.0 2.3 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID31146.1 - 0.005 17.2 0.1 0.0069 16.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID31146.1 - 0.0052 16.5 0.2 0.01 15.5 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31146.1 - 0.0056 16.6 0.0 0.0086 16.0 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID31146.1 - 0.014 15.9 0.0 0.019 15.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID31146.1 - 0.014 15.5 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 AID31146.1 - 0.02 15.2 0.0 0.04 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID31146.1 - 0.023 14.9 0.0 0.65 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID31146.1 - 0.034 14.7 0.0 0.31 11.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID31146.1 - 0.07 13.3 1.0 1.2 9.3 0.0 2.5 2 1 0 3 3 3 0 AAA domain BPD_transp_1 PF00528.22 AID31147.1 - 1.1e-23 84.0 19.2 1.1e-23 84.0 19.2 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Ykof PF07615.11 AID31148.1 - 3.5e-63 210.0 0.0 3.4e-32 110.8 0.0 2.1 2 0 0 2 2 2 2 YKOF-related Family Thiamine_BP PF01910.17 AID31148.1 - 0.019 14.8 0.0 0.85 9.6 0.0 2.2 2 0 0 2 2 2 0 Thiamine-binding protein DUF3385 PF11865.8 AID31148.1 - 0.23 11.4 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) PMSR PF01625.21 AID31150.1 - 6.1e-58 195.3 0.0 6.9e-58 195.2 0.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PMT_2 PF13231.6 AID31151.1 - 3.9e-27 95.4 11.0 3.9e-27 95.4 11.0 2.2 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF1345 PF07077.11 AID31152.1 - 0.0089 15.7 9.3 0.011 15.4 6.4 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF1345) Acetyltransf_1 PF00583.25 AID31153.1 - 6.1e-17 61.9 0.1 7.4e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID31153.1 - 4.9e-14 52.4 0.0 6.3e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID31153.1 - 3e-11 43.6 0.1 3.8e-11 43.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID31153.1 - 9.1e-06 25.8 0.1 0.0001 22.3 0.1 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID31153.1 - 2.7e-05 24.0 0.1 3.8e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 AID31153.1 - 6.9e-05 23.0 0.0 8.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID31153.1 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 AID31153.1 - 0.021 15.5 0.0 0.025 15.2 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID31153.1 - 0.031 14.0 0.2 0.04 13.7 0.2 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Terminase_6 PF03237.15 AID31156.1 - 1.7e-20 73.6 0.0 2.3e-20 73.2 0.0 1.1 1 0 0 1 1 1 1 Terminase-like family Pex14_N PF04695.13 AID31160.1 - 0.07 13.8 0.0 0.078 13.6 0.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region NHase_alpha PF02979.16 AID31160.1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain Renin_r PF07850.14 AID31161.1 - 0.063 13.9 0.9 3.2 8.4 0.1 2.5 2 0 0 2 2 2 0 Renin receptor-like protein DUF4231 PF14015.6 AID31161.1 - 2.2 8.8 5.8 10 6.7 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) DoxX PF07681.12 AID31162.1 - 1.4e-09 38.4 21.3 1.4e-09 38.4 21.3 1.5 2 0 0 2 2 2 1 DoxX DUF2070 PF09843.9 AID31162.1 - 5.4 5.2 8.5 6.3 5.0 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Glyoxalase PF00903.25 AID31163.1 - 4.3e-10 39.9 0.0 1e-09 38.7 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID31163.1 - 0.00015 21.9 0.1 0.0035 17.5 0.0 2.0 1 1 0 2 2 2 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID31163.1 - 0.00057 20.6 0.0 0.00079 20.2 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID31163.1 - 0.00078 19.7 0.0 0.0033 17.7 0.0 1.9 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Band_7 PF01145.25 AID31164.1 - 2.3e-32 112.5 2.7 2.3e-32 112.5 2.7 1.5 2 0 0 2 2 2 1 SPFH domain / Band 7 family DUF3606 PF12244.8 AID31166.1 - 2.6e-15 56.1 0.0 2.9e-15 55.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3606) HHH_4 PF14490.6 AID31166.1 - 0.0011 18.8 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix containing domain CENP-B_N PF04218.13 AID31166.1 - 0.011 15.4 0.0 0.015 14.9 0.0 1.5 1 1 0 1 1 1 0 CENP-B N-terminal DNA-binding domain FRB_dom PF08771.11 AID31166.1 - 0.028 14.8 0.0 0.031 14.7 0.0 1.0 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain VIT1 PF01988.19 AID31166.1 - 0.056 13.3 0.0 0.058 13.3 0.0 1.0 1 0 0 1 1 1 0 VIT family DUF3791 PF12668.7 AID31166.1 - 0.09 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) DUF99 PF01949.16 AID31166.1 - 0.11 11.9 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF99 GFA PF04828.14 AID31167.1 - 2.7e-17 62.9 0.0 4e-17 62.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Lar_restr_allev PF14354.6 AID31167.1 - 0.45 10.9 3.1 7.3 7.1 0.0 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar DUF982 PF06169.12 AID31169.1 - 3.1e-21 75.2 0.6 3.4e-21 75.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) DUF982 PF06169.12 AID31170.1 - 3.1e-16 59.2 0.2 3.4e-16 59.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) Abhydrolase_1 PF00561.20 AID31173.1 - 7e-24 84.9 0.1 4.8e-23 82.1 0.2 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID31173.1 - 7.5e-13 49.6 19.8 9.2e-13 49.3 19.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID31173.1 - 8.3e-06 25.2 0.3 2.5e-05 23.7 0.3 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 AID31173.1 - 0.00037 19.3 0.0 0.0005 18.9 0.0 1.1 1 0 0 1 1 1 1 Ndr family Chlorophyllase2 PF12740.7 AID31173.1 - 0.024 13.5 0.0 0.044 12.7 0.0 1.3 1 1 0 1 1 1 0 Chlorophyllase enzyme Chlorophyllase PF07224.11 AID31173.1 - 0.11 11.4 0.0 0.18 10.8 0.0 1.4 1 1 0 1 1 1 0 Chlorophyllase Thioesterase PF00975.20 AID31173.1 - 0.12 12.5 0.3 1.5 8.9 0.1 2.1 2 0 0 2 2 2 0 Thioesterase domain MgtC PF02308.16 AID31174.1 - 4.5e-33 114.2 12.7 5.6e-33 113.9 12.7 1.0 1 0 0 1 1 1 1 MgtC family Pyrid_ox_like PF16242.5 AID31175.1 - 1.1e-47 161.4 0.1 1.2e-47 161.2 0.1 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Putative_PNPOx PF01243.20 AID31175.1 - 1.6e-09 37.8 0.0 2.5e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 AID31175.1 - 7e-07 29.3 0.0 8.7e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF982 PF06169.12 AID31177.1 - 1.2e-21 76.5 0.2 1.3e-21 76.4 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) DUF378 PF04070.12 AID31178.1 - 1.3e-14 53.8 9.0 1.4e-14 53.6 9.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF378) HWE_HK PF07536.14 AID31179.1 - 1.6e-27 96.0 0.5 9.5e-27 93.5 0.1 2.4 3 0 0 3 3 3 1 HWE histidine kinase PAS PF00989.25 AID31179.1 - 1.3e-17 63.8 0.1 5e-17 61.9 0.0 2.0 2 1 1 3 3 3 1 PAS fold PAS_9 PF13426.7 AID31179.1 - 2.6e-16 59.7 0.0 5.3e-16 58.8 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 AID31179.1 - 1.2e-12 48.0 0.0 2.4e-12 47.1 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 AID31179.1 - 6.7e-08 32.7 0.0 1.1e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 PAS fold HisKA_2 PF07568.12 AID31179.1 - 1.6e-07 31.3 0.4 4.5e-07 29.9 0.4 1.8 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.7 AID31179.1 - 1.3e-05 25.1 0.0 2.8e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_10 PF13596.6 AID31179.1 - 0.013 16.1 0.0 0.025 15.2 0.0 1.5 1 0 0 1 1 1 0 PAS domain HATPase_c_2 PF13581.6 AID31179.1 - 0.047 13.7 0.0 0.1 12.6 0.0 1.6 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain RHH_1 PF01402.21 AID31180.1 - 0.019 14.9 0.7 0.032 14.2 0.7 1.4 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family Aldo_ket_red PF00248.21 AID31182.1 - 8.5e-72 241.8 0.0 9.5e-72 241.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DpaA_N PF16924.5 AID31182.1 - 0.11 12.5 0.0 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain DUF1236 PF06823.12 AID31183.1 - 6.2e-16 58.0 4.0 1.1e-15 57.3 4.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1236) Med15 PF09606.10 AID31183.1 - 0.14 10.9 50.8 0.17 10.6 50.8 1.0 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal GREB1 PF15782.5 AID31183.1 - 1.2 6.1 23.0 1.5 5.9 23.0 1.1 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer LAP1C PF05609.12 AID31183.1 - 2.8 6.9 28.0 3.4 6.7 28.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) VP9 PF09625.10 AID31185.1 - 0.034 14.3 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 VP9 protein Peptidase_C14 PF00656.22 AID31186.1 - 1.7e-24 87.1 0.0 3.3e-24 86.2 0.0 1.4 1 0 0 1 1 1 1 Caspase domain Sel1 PF08238.12 AID31186.1 - 7.1e-23 80.5 23.6 5.5e-07 30.0 0.1 6.9 7 0 0 7 7 7 5 Sel1 repeat YfiO PF13525.6 AID31186.1 - 0.033 13.9 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 Outer membrane lipoprotein MEDS PF14417.6 AID31188.1 - 0.073 12.9 0.0 0.073 12.9 0.0 1.0 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Glyco_trans_1_4 PF13692.6 AID31189.1 - 0.0047 17.4 0.0 0.011 16.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID31189.1 - 0.0054 17.1 0.1 0.015 15.6 0.1 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 AID31189.1 - 0.045 13.3 0.0 0.081 12.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 APH PF01636.23 AID31191.1 - 8.4e-27 94.6 1.1 1.1e-26 94.3 1.1 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family AI-2E_transport PF01594.16 AID31194.1 - 3.1e-46 158.0 31.8 1.2e-45 156.1 31.8 1.7 1 1 0 1 1 1 1 AI-2E family transporter CEND1 PF15677.5 AID31194.1 - 0.11 13.0 1.3 0.26 11.8 1.3 1.5 1 0 0 1 1 1 0 Cell cycle exit and neuronal differentiation protein 1 Dala_Dala_lig_C PF07478.13 AID31195.1 - 1.9e-61 207.2 0.0 2.4e-61 206.9 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 AID31195.1 - 5.4e-29 100.7 0.0 1.2e-28 99.6 0.0 1.6 2 0 0 2 2 2 1 D-ala D-ala ligase N-terminus ATP-grasp PF02222.22 AID31195.1 - 9.4e-11 41.6 0.0 9.3e-10 38.3 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 AID31195.1 - 5.9e-07 29.2 0.0 5e-06 26.2 0.0 2.0 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 AID31195.1 - 9.8e-06 25.3 0.0 9.8e-05 22.0 0.0 2.3 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 AID31195.1 - 6.6e-05 23.0 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 AID31195.1 - 0.015 14.9 0.0 0.031 13.9 0.0 1.5 1 0 0 1 1 1 0 RimK-like ATP-grasp domain Peptidase_C39_2 PF13529.6 AID31197.1 - 0.0008 20.0 0.0 0.00089 19.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase_C39 like family Sigma70_r4_2 PF08281.12 AID31198.1 - 0.0061 16.2 0.1 0.0064 16.1 0.1 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_AsnC-type PF13404.6 AID31198.1 - 0.01 15.6 0.1 0.015 15.1 0.1 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID31198.1 - 0.033 13.7 0.1 0.044 13.3 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RseC_MucC PF04246.12 AID31199.1 - 0.00017 21.5 4.7 0.00093 19.2 0.1 2.1 2 0 0 2 2 2 2 Positive regulator of sigma(E), RseC/MucC DUF3040 PF11239.8 AID31199.1 - 0.2 11.9 8.1 0.56 10.5 0.3 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3040) CcmD PF04995.14 AID31199.1 - 0.3 11.2 4.5 0.59 10.3 0.5 2.8 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) Glyoxalase PF00903.25 AID31200.1 - 2.7e-13 50.2 0.2 6.6e-13 49.0 0.2 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID31200.1 - 0.015 16.1 0.1 0.03 15.1 0.1 1.5 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID31200.1 - 0.048 13.9 1.0 3.8 7.8 0.0 2.3 1 1 1 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID31200.1 - 0.086 12.8 0.0 0.65 9.9 0.0 2.0 2 0 0 2 2 2 0 Glyoxalase-like domain GGA_N-GAT PF18308.1 AID31201.1 - 0.084 12.5 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 GGA N-GAT domain Aminotran_1_2 PF00155.21 AID31202.1 - 8.1e-27 94.3 0.0 9e-27 94.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 AID31202.1 - 9.7e-08 31.2 0.0 1.5e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Acetyltransf_1 PF00583.25 AID31203.1 - 6.9e-13 48.9 0.0 8e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID31203.1 - 3.4e-08 33.8 0.0 5e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID31203.1 - 6.9e-07 29.2 0.0 1e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID31203.1 - 0.037 14.1 0.0 0.058 13.5 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID31203.1 - 0.1 12.5 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Cas_VVA1548 PF09652.10 AID31203.1 - 0.17 12.1 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative CRISPR-associated protein (Cas_VVA1548) DEDD_Tnp_IS110 PF01548.17 AID31204.1 - 7.1e-21 74.7 0.0 2e-20 73.3 0.0 1.8 2 0 0 2 2 2 1 Transposase Transposase_20 PF02371.16 AID31204.1 - 3.7e-14 52.8 0.4 1e-13 51.4 0.3 1.8 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family Aminotran_1_2 PF00155.21 AID31205.1 - 4.9e-26 91.7 0.0 6.2e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID31205.1 - 1.3e-12 47.1 0.0 3.8e-12 45.7 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 AID31205.1 - 0.038 13.9 0.2 0.68 9.9 0.0 2.6 2 0 0 2 2 2 0 MarR family HTH_IclR PF09339.10 AID31205.1 - 0.048 13.5 0.1 0.27 11.1 0.0 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain Moricin PF06451.11 AID31205.1 - 0.22 11.3 0.5 0.48 10.2 0.5 1.5 1 0 0 1 1 1 0 Moricin DUF922 PF06037.11 AID31207.1 - 2.6e-49 167.1 0.0 3e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF922) Ser_hydrolase PF06821.13 AID31208.1 - 1.2e-57 194.6 0.0 1.3e-57 194.4 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 AID31208.1 - 0.00027 21.6 4.6 0.00037 21.2 4.6 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID31208.1 - 0.0007 19.3 0.0 0.0016 18.2 0.0 1.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold HTH_AsnC-type PF13404.6 AID31209.1 - 6.6e-16 57.9 0.1 1.1e-15 57.1 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID31209.1 - 1.3e-15 56.7 0.1 1.9e-15 56.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 AID31209.1 - 9.9e-15 54.3 0.1 1.5e-14 53.7 0.1 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR PF01047.22 AID31209.1 - 5.3e-07 29.5 0.0 1.1e-06 28.4 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID31209.1 - 1.5e-06 28.0 0.0 3e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID31209.1 - 0.00012 21.8 0.0 0.0037 17.0 0.0 2.6 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_1 PF00126.27 AID31209.1 - 0.0002 21.3 0.2 0.0044 16.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_5 PF01022.20 AID31209.1 - 0.0018 18.1 0.0 0.0031 17.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID31209.1 - 0.0034 17.4 0.0 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID31209.1 - 0.0086 16.0 0.2 0.023 14.6 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_28 PF13518.6 AID31209.1 - 0.0087 16.2 1.1 0.014 15.5 0.3 1.8 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_27 PF13463.6 AID31209.1 - 0.011 16.2 0.0 0.064 13.8 0.0 2.1 2 1 0 2 2 2 0 Winged helix DNA-binding domain DUF2336 PF10098.9 AID31209.1 - 0.029 13.8 0.2 0.094 12.2 0.0 1.8 2 1 0 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2336) LexA_DNA_bind PF01726.16 AID31209.1 - 0.055 13.3 0.0 0.21 11.4 0.0 1.9 2 0 0 2 2 2 0 LexA DNA binding domain TrmB PF01978.19 AID31209.1 - 0.14 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 AID31209.1 - 0.18 12.0 0.0 0.45 10.8 0.0 1.7 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain CCP_MauG PF03150.14 AID31210.1 - 6.2e-42 143.8 0.1 1.4e-35 123.1 0.1 2.3 2 0 0 2 2 2 2 Di-haem cytochrome c peroxidase Cytochrom_C PF00034.21 AID31210.1 - 8e-09 36.5 0.0 1e-05 26.6 0.0 3.5 2 2 0 2 2 2 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AID31210.1 - 6.3e-06 26.4 0.3 2.4 8.6 0.0 3.7 3 0 0 3 3 3 3 Cytochrome C oxidase, cbb3-type, subunit III Paired_CXXCH_1 PF09699.10 AID31210.1 - 0.00092 18.9 1.1 0.48 10.2 0.1 2.5 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) DUF1924 PF09086.11 AID31210.1 - 0.0011 19.3 0.2 0.72 10.3 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF1924) Cytochrome_C7 PF14522.6 AID31210.1 - 0.012 15.6 0.0 5.3 7.1 0.0 2.3 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c MCR PF18509.1 AID31210.1 - 1.2 8.7 7.5 5.4 6.7 0.8 2.4 2 0 0 2 2 2 0 Magnetochrome domain GSu_C4xC__C2xCH PF09698.10 AID31210.1 - 3.1 8.7 5.2 45 5.0 0.2 2.8 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) EAL PF00563.20 AID31211.1 - 2.3e-72 243.4 0.0 3.8e-72 242.6 0.0 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID31211.1 - 2.7e-41 141.0 0.0 5.4e-41 140.0 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain A_deaminase PF00962.22 AID31212.1 - 5.3e-66 223.2 0.0 8.3e-66 222.5 0.0 1.3 1 1 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 AID31212.1 - 0.014 14.9 0.3 0.017 14.7 0.3 1.3 1 0 0 1 1 1 0 Amidohydrolase family adh_short_C2 PF13561.6 AID31213.1 - 3.7e-45 154.3 0.1 4.9e-45 153.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31213.1 - 3.6e-33 114.7 0.0 4.5e-33 114.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase ADH_zinc_N PF00107.26 AID31213.1 - 0.067 13.2 0.1 0.1 12.6 0.1 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase LysR_substrate PF03466.20 AID31214.1 - 2.9e-33 115.0 3.6 2.9e-33 115.0 3.6 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID31214.1 - 2.7e-18 65.7 2.1 5.1e-18 64.8 2.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family AsnC_trans_reg PF01037.21 AID31216.1 - 4.9e-20 71.3 0.0 1e-19 70.3 0.0 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID31216.1 - 5.1e-15 55.0 5.8 1.1e-14 54.0 5.8 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID31216.1 - 1e-13 50.6 0.2 1.6e-13 50.0 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID31216.1 - 4.5e-05 23.3 1.3 7.3e-05 22.6 1.3 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID31216.1 - 0.0017 18.4 0.6 0.0032 17.5 0.6 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID31216.1 - 0.0048 16.8 0.0 0.0084 16.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID31216.1 - 0.05 13.4 0.5 0.096 12.5 0.5 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_47 PF16221.5 AID31216.1 - 0.081 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_11 PF08279.12 AID31216.1 - 0.1 12.6 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 HTH domain Fe_dep_repress PF01325.19 AID31216.1 - 0.23 11.7 0.0 0.4 10.9 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain OCD_Mu_crystall PF02423.15 AID31217.1 - 1.1e-60 205.2 0.1 1.4e-60 204.9 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 AID31217.1 - 4.8e-06 26.7 0.0 8.3e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Abhydrolase_6 PF12697.7 AID31217.1 - 2.6 8.6 8.8 0.73 10.4 3.2 2.1 1 1 0 2 2 2 0 Alpha/beta hydrolase family DAO PF01266.24 AID31218.1 - 2.7e-45 155.5 8.0 3.1e-45 155.3 8.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID31218.1 - 9e-08 31.7 0.1 5.1e-05 22.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID31218.1 - 2.4e-07 30.9 0.4 8e-07 29.2 0.4 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID31218.1 - 5.2e-07 30.1 0.1 1.8e-05 25.2 0.1 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID31218.1 - 3e-06 26.7 0.2 0.0078 15.5 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID31218.1 - 0.00019 20.3 0.1 0.063 12.0 0.0 2.3 2 0 0 2 2 2 2 HI0933-like protein Amino_oxidase PF01593.24 AID31218.1 - 0.00038 19.9 0.1 0.013 14.9 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 AID31218.1 - 0.0031 16.8 0.0 0.0066 15.8 0.0 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 AID31218.1 - 0.0094 15.9 0.5 0.63 10.0 0.1 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 AID31218.1 - 0.01 15.0 4.1 0.013 14.6 4.1 1.3 1 0 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.19 AID31218.1 - 0.014 14.6 0.2 0.039 13.2 0.2 1.7 1 1 0 1 1 1 0 FAD binding domain Lycopene_cycl PF05834.12 AID31218.1 - 0.019 14.0 0.1 0.03 13.4 0.1 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 AID31218.1 - 0.031 13.1 0.4 0.043 12.7 0.4 1.2 1 0 0 1 1 1 0 Tryptophan halogenase DUF1188 PF06690.11 AID31218.1 - 0.068 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) FAD_oxidored PF12831.7 AID31218.1 - 0.11 11.8 3.1 0.13 11.5 3.1 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase K_oxygenase PF13434.6 AID31218.1 - 0.21 10.7 0.0 0.3 10.2 0.0 1.1 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF1275 PF06912.11 AID31219.1 - 1.4e-28 100.1 23.5 1.6e-28 99.9 23.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) MarR PF01047.22 AID31220.1 - 9.3e-11 41.5 0.2 3.4e-10 39.7 0.0 1.9 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 AID31220.1 - 2.7e-10 40.0 0.4 5.6e-10 39.0 0.4 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID31220.1 - 3.8e-09 36.9 0.2 1.2e-08 35.3 0.1 1.9 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID31220.1 - 1e-05 25.2 0.8 2.2e-05 24.1 0.1 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 AID31220.1 - 0.0002 21.3 2.9 0.00029 20.8 0.8 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain FeoC PF09012.10 AID31220.1 - 0.0055 16.8 0.0 0.0096 16.0 0.0 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator SMC_ScpB PF04079.16 AID31220.1 - 0.0057 16.3 0.0 0.023 14.3 0.0 1.8 1 1 1 2 2 2 1 Segregation and condensation complex subunit ScpB RP-C PF03428.13 AID31220.1 - 0.0067 16.1 0.3 0.012 15.2 0.1 1.5 1 1 0 1 1 1 1 Replication protein C N-terminal domain PadR PF03551.14 AID31220.1 - 0.008 16.1 0.0 0.018 15.0 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 AID31220.1 - 0.013 15.0 0.0 0.034 13.7 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding SelB-wing_2 PF09106.11 AID31220.1 - 0.017 15.3 0.8 0.031 14.5 0.2 1.7 2 0 0 2 2 2 0 Elongation factor SelB, winged helix HTH_34 PF13601.6 AID31220.1 - 0.018 15.2 0.0 0.033 14.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 AID31220.1 - 0.029 14.1 0.7 0.06 13.1 0.0 1.8 2 0 0 2 2 2 0 LexA DNA binding domain B-block_TFIIIC PF04182.12 AID31220.1 - 0.032 14.4 0.0 0.049 13.8 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC DUF4574 PF15141.6 AID31220.1 - 0.099 12.6 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 DprA_WH PF17782.1 AID31220.1 - 0.14 12.3 0.5 0.14 12.3 0.5 1.9 2 0 0 2 2 2 0 DprA winged helix domain ECH_1 PF00378.20 AID31221.1 - 1.4e-43 149.1 0.0 1.6e-43 148.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID31221.1 - 6e-28 98.3 0.0 3.1e-25 89.4 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase AMP-binding PF00501.28 AID31222.1 - 1.6e-89 300.4 0.0 1.9e-89 300.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID31222.1 - 5e-20 72.2 1.1 1.5e-19 70.8 0.0 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain BKACE PF05853.12 AID31223.1 - 2.6e-24 86.0 3.3 1.8e-23 83.2 3.3 1.9 1 1 0 1 1 1 1 beta-keto acid cleavage enzyme DUF5596 PF18082.1 AID31223.1 - 0.099 12.5 0.0 0.25 11.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5596) EAL PF00563.20 AID31225.1 - 4.3e-43 147.5 0.0 4.8e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID31226.1 - 3.9e-35 121.0 0.0 6.5e-35 120.3 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID31226.1 - 8.9e-32 109.2 0.1 6.1e-19 68.1 0.0 2.4 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 AID31226.1 - 6.5e-08 32.6 0.0 0.0051 16.8 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 AID31226.1 - 3.6e-05 24.0 0.0 0.02 15.1 0.0 2.3 2 0 0 2 2 2 2 PAS domain PAS_11 PF14598.6 AID31226.1 - 0.0002 21.4 0.0 0.12 12.5 0.0 2.3 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 AID31226.1 - 0.045 14.0 2.5 1.1 9.6 0.1 3.0 3 0 0 3 3 3 0 PAS fold ZapD PF07072.11 AID31226.1 - 0.047 13.4 0.0 0.07 12.9 0.0 1.2 1 0 0 1 1 1 0 Cell division protein SnoaL PF07366.12 AID31228.1 - 1.2e-39 135.0 0.0 1.3e-39 134.8 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 AID31228.1 - 3.1e-17 63.1 1.6 3.9e-17 62.7 1.6 1.1 1 0 0 1 1 1 1 SnoaL-like domain PAP2_3 PF14378.6 AID31229.1 - 5.6e-22 78.4 16.9 5.6e-22 78.4 16.9 2.2 2 1 0 2 2 2 1 PAP2 superfamily PAP2 PF01569.21 AID31229.1 - 0.0018 18.1 13.1 0.0018 18.1 13.1 3.0 2 1 1 3 3 3 1 PAP2 superfamily PAP2_C PF14360.6 AID31229.1 - 0.0034 17.9 3.7 0.0034 17.9 3.7 2.5 2 0 0 2 2 2 1 PAP2 superfamily C-terminal Fun_ATP-synt_8 PF05933.13 AID31229.1 - 0.1 12.8 0.7 1.7 8.8 0.1 2.7 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) DUF1330 PF07045.11 AID31231.1 - 1.3e-24 86.4 0.0 1.4e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) HxlR PF01638.17 AID31232.1 - 9.6e-25 86.3 0.1 1.4e-24 85.7 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.6 AID31232.1 - 0.021 15.0 0.0 0.039 14.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.14 AID31232.1 - 0.099 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_20 PF12840.7 AID31232.1 - 0.13 12.3 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DNA_binding_1 PF01035.20 AID31233.1 - 2.4e-32 110.9 1.4 9.5e-32 109.0 0.6 2.3 2 0 0 2 2 2 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Ada_Zn_binding PF02805.16 AID31233.1 - 1.5e-28 98.6 3.6 3.5e-28 97.4 3.6 1.7 1 0 0 1 1 1 1 Metal binding domain of Ada HTH_18 PF12833.7 AID31233.1 - 1.1e-16 60.9 0.7 3e-16 59.5 0.2 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31233.1 - 1.6e-08 34.4 0.0 2.5e-06 27.4 0.0 2.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family DNA_binding_1 PF01035.20 AID31237.1 - 5.6e-32 109.7 0.2 5.6e-32 109.7 0.2 1.7 2 0 0 2 2 2 1 6-O-methylguanine DNA methyltransferase, DNA binding domain E1-N PF14463.6 AID31237.1 - 0.4 10.5 3.9 0.48 10.2 2.8 1.8 1 1 1 2 2 2 0 E1 N-terminal domain Oxygenase-NA PF09859.9 AID31238.1 - 8.8e-88 292.3 0.0 1.1e-87 292.0 0.0 1.1 1 0 0 1 1 1 1 Oxygenase, catalysing oxidative methylation of damaged DNA Sigma70_r2 PF04542.14 AID31239.1 - 1.1e-16 60.3 0.5 2.2e-16 59.4 0.5 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID31239.1 - 6.7e-13 48.1 0.0 1.4e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID31239.1 - 0.0002 20.8 0.0 0.00038 19.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_2 PF12680.7 AID31239.1 - 0.02 15.5 1.0 0.23 12.1 0.2 2.8 2 1 1 3 3 3 0 SnoaL-like domain Abhydrolase_3 PF07859.13 AID31240.1 - 1.1e-49 169.2 0.0 1.5e-49 168.7 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 AID31240.1 - 3.3e-07 29.5 0.0 4.5e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase DLH PF01738.18 AID31240.1 - 0.085 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family NmrA PF05368.13 AID31241.1 - 5.6e-30 104.6 0.0 6.8e-30 104.3 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID31241.1 - 5.3e-21 75.3 0.4 7.8e-21 74.8 0.4 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID31241.1 - 4.8e-08 32.8 0.7 1.4e-07 31.3 0.7 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID31241.1 - 3.4e-05 23.0 0.4 7.7e-05 21.8 0.4 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID31241.1 - 0.0025 17.0 0.1 0.038 13.1 0.2 2.1 2 0 0 2 2 2 1 RmlD substrate binding domain adh_short PF00106.25 AID31241.1 - 0.03 13.8 0.5 0.051 13.0 0.5 1.4 1 0 0 1 1 1 0 short chain dehydrogenase MIF PF01187.18 AID31241.1 - 0.03 14.6 0.0 2.1 8.6 0.0 2.4 1 1 1 2 2 2 0 Macrophage migration inhibitory factor (MIF) GDP_Man_Dehyd PF16363.5 AID31241.1 - 0.054 12.9 0.1 0.076 12.4 0.1 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID31241.1 - 0.092 11.9 0.0 0.17 11.1 0.0 1.4 1 0 0 1 1 1 0 Male sterility protein Glyco_trans_4_4 PF13579.6 AID31241.1 - 0.25 11.8 5.1 1.4 9.4 1.2 2.7 2 2 0 2 2 2 0 Glycosyl transferase 4-like domain RibD_C PF01872.17 AID31242.1 - 6.2e-37 127.4 0.0 7.9e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain GP88 PF17338.2 AID31242.1 - 0.14 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Gene product 88 DUF899 PF05988.12 AID31244.1 - 8.3e-86 287.0 0.1 9.2e-86 286.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) IMS PF00817.20 AID31245.1 - 7.5e-47 159.1 0.0 1.3e-46 158.4 0.0 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 AID31245.1 - 1e-11 45.6 0.6 2.5e-11 44.3 0.6 1.6 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 AID31245.1 - 6.9e-06 26.1 0.2 3.5e-05 23.9 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif DUF1805 PF08827.11 AID31245.1 - 0.088 13.1 0.1 0.51 10.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) DUF4113 PF13438.6 AID31245.1 - 0.11 12.6 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) HHH_5 PF14520.6 AID31245.1 - 0.11 13.1 0.2 0.42 11.3 0.2 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix domain Excalibur PF05901.11 AID31246.1 - 3.9e-10 40.2 0.1 5.2e-10 39.8 0.1 1.2 1 0 0 1 1 1 1 Excalibur calcium-binding domain RsgA_GTPase PF03193.16 AID31247.1 - 2.9e-46 157.4 0.0 4.1e-46 156.9 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 AID31247.1 - 7.1e-07 29.3 0.0 1.6e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 AID31247.1 - 7.2e-07 29.8 0.2 1.4e-06 28.9 0.2 1.4 1 0 0 1 1 1 1 ABC transporter FeoB_N PF02421.18 AID31247.1 - 0.00021 20.8 0.1 0.0022 17.5 0.0 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B AAA_16 PF13191.6 AID31247.1 - 0.00048 20.6 1.6 0.00086 19.7 0.4 1.9 1 1 1 2 2 2 1 AAA ATPase domain Septin PF00735.18 AID31247.1 - 0.001 18.4 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 Septin GTP_EFTU PF00009.27 AID31247.1 - 0.0021 17.6 1.0 0.45 10.0 0.0 2.3 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 AID31247.1 - 0.0021 17.4 0.1 0.005 16.2 0.0 1.6 2 0 0 2 2 2 1 AIG1 family AAA_22 PF13401.6 AID31247.1 - 0.0047 17.2 0.2 0.0092 16.3 0.2 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID31247.1 - 0.0089 15.7 0.4 0.022 14.5 0.4 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 AID31247.1 - 0.011 15.4 0.3 0.02 14.6 0.3 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 AID31247.1 - 0.019 14.9 0.1 0.033 14.1 0.1 1.4 1 0 0 1 1 1 0 NACHT domain MeaB PF03308.16 AID31247.1 - 0.021 13.8 0.2 0.039 12.9 0.2 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 AID31247.1 - 0.025 14.8 0.5 0.19 11.9 0.1 2.3 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 AID31247.1 - 0.03 14.5 0.0 0.061 13.6 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 AID31247.1 - 0.034 14.4 0.3 0.082 13.1 0.3 1.7 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AID31247.1 - 0.037 13.7 0.1 0.064 12.9 0.1 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain cobW PF02492.19 AID31247.1 - 0.071 12.7 0.2 1.7 8.2 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_24 PF13479.6 AID31247.1 - 0.084 12.6 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID31247.1 - 0.085 13.3 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 AID31247.1 - 0.087 12.4 1.3 0.18 11.4 1.0 1.7 1 1 1 2 2 2 0 AAA domain IIGP PF05049.13 AID31247.1 - 0.098 11.7 0.2 0.14 11.2 0.2 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) PduV-EutP PF10662.9 AID31247.1 - 0.13 12.0 0.5 1.6 8.4 0.1 2.6 3 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 AID31247.1 - 0.14 12.1 0.0 0.31 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Dynamin_N PF00350.23 AID31247.1 - 0.17 12.0 3.7 0.56 10.2 0.9 2.7 2 1 1 3 3 3 0 Dynamin family AAA_7 PF12775.7 AID31247.1 - 0.19 11.2 0.1 0.31 10.6 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region FA_hydroxylase PF04116.13 AID31248.1 - 5e-19 69.0 19.3 6.8e-19 68.5 19.3 1.2 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily NUDIX PF00293.28 AID31249.1 - 4.6e-15 55.8 0.0 5.5e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain GFO_IDH_MocA PF01408.22 AID31250.1 - 8.6e-25 87.9 0.1 1.9e-24 86.8 0.1 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID31250.1 - 1.5e-09 37.8 0.0 2.8e-09 37.0 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain TPP_enzyme_C PF02775.21 AID31250.1 - 0.029 14.1 0.2 0.11 12.2 0.0 2.0 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SIS PF01380.22 AID31251.1 - 9.4e-25 87.0 0.1 1.7e-24 86.2 0.1 1.4 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 AID31251.1 - 4.3e-11 42.6 0.1 1.6e-10 40.8 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family adh_short_C2 PF13561.6 AID31252.1 - 9.1e-52 175.9 0.4 1.1e-51 175.7 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31252.1 - 2.5e-47 160.8 0.1 3.2e-47 160.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31252.1 - 8e-18 65.0 0.3 1.1e-17 64.6 0.3 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31252.1 - 0.0045 16.5 0.1 0.02 14.3 0.1 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Shikimate_DH PF01488.20 AID31252.1 - 0.11 12.6 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF1776 PF08643.10 AID31252.1 - 0.15 11.4 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Mannitol_dh_C PF08125.13 AID31253.1 - 2.4e-58 197.5 0.0 3.1e-58 197.1 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 AID31253.1 - 1.3e-34 119.5 0.0 2.1e-34 118.9 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain AP_endonuc_2 PF01261.24 AID31254.1 - 2e-39 135.3 0.0 2.4e-39 134.9 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID31254.1 - 3.8e-05 23.3 0.2 7.5e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus Peripla_BP_4 PF13407.6 AID31255.1 - 2.2e-44 152.0 11.7 2.7e-44 151.7 11.7 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID31255.1 - 1.2e-06 28.2 0.2 1.6e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LpxD PF04613.14 AID31255.1 - 0.16 11.8 0.7 5.5 6.8 0.3 2.7 2 1 1 3 3 3 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABC_tran PF00005.27 AID31256.1 - 4.3e-38 130.9 0.0 3.5e-19 69.7 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31256.1 - 6.4e-06 26.2 1.6 0.023 14.5 0.4 2.5 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID31256.1 - 0.00026 21.4 0.6 0.0012 19.3 0.4 2.1 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID31256.1 - 0.0015 18.4 0.1 0.0053 16.7 0.1 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 AID31256.1 - 0.0051 16.5 0.2 0.016 15.0 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID31256.1 - 0.0081 15.9 0.5 0.034 13.9 0.5 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID31256.1 - 0.014 14.9 0.2 1.7 8.0 0.0 2.5 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID31256.1 - 0.018 15.5 0.0 0.13 12.7 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID31256.1 - 0.063 13.5 0.0 0.15 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID31256.1 - 0.1 12.2 1.3 0.32 10.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID31256.1 - 0.1 12.7 0.1 0.26 11.4 0.1 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF815 PF05673.13 AID31256.1 - 0.14 11.3 0.1 0.24 10.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 AID31256.1 - 0.14 12.4 0.1 1.2 9.4 0.1 2.4 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID31256.1 - 0.14 12.6 0.0 0.24 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID31256.1 - 0.84 9.8 2.7 4.4 7.5 1.5 2.5 2 1 0 2 2 2 0 AAA domain BPD_transp_2 PF02653.16 AID31258.1 - 1.3e-43 149.1 39.5 1.3e-43 149.1 39.5 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID31260.1 - 2.1e-48 164.8 38.6 2.1e-48 164.8 38.6 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component P5CR_dimer PF14748.6 AID31261.1 - 0.0023 18.1 0.9 0.074 13.3 0.1 2.3 1 1 1 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation Mod_r PF07200.13 AID31261.1 - 0.034 14.2 0.1 0.057 13.5 0.1 1.3 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein BTAD PF03704.17 AID31262.1 - 8.8e-21 74.9 9.0 8.8e-21 74.9 9.0 2.6 2 1 1 3 3 3 1 Bacterial transcriptional activator domain Abhydrolase_1 PF00561.20 AID31262.1 - 4.3e-11 43.0 0.1 6.5e-11 42.4 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID31262.1 - 1.1e-07 31.3 0.0 2.1e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 AID31262.1 - 4.2e-05 22.4 0.0 7.1e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 Ndr family PP2C_2 PF13672.6 AID31262.1 - 0.027 14.1 0.6 5.4 6.6 0.2 2.3 2 0 0 2 2 2 0 Protein phosphatase 2C Methyltransf_11 PF08241.12 AID31263.1 - 2.4e-19 69.8 0.0 5e-19 68.7 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31263.1 - 1.1e-14 54.6 0.0 1.4e-14 54.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID31263.1 - 2.6e-13 50.5 0.0 5.2e-13 49.5 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID31263.1 - 7e-11 41.9 0.0 8.9e-11 41.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 AID31263.1 - 9.9e-08 31.9 0.0 1.3e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID31263.1 - 2.7e-07 31.3 0.0 4.8e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 AID31263.1 - 0.005 16.5 0.0 0.44 10.1 0.0 2.2 2 0 0 2 2 2 1 Nodulation protein S (NodS) Pox_MCEL PF03291.16 AID31263.1 - 0.045 12.9 0.0 0.064 12.4 0.0 1.2 1 0 0 1 1 1 0 mRNA capping enzyme Methyltransf_8 PF05148.15 AID31263.1 - 0.21 11.4 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF87 PF01935.17 AID31264.1 - 8.3e-08 32.6 0.0 1.3e-07 32.0 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_16 PF13191.6 AID31264.1 - 2.6e-05 24.7 0.2 2.6e-05 24.7 0.2 2.5 2 2 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID31264.1 - 9.5e-05 22.7 0.0 0.00052 20.3 0.0 2.2 1 1 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.9 AID31264.1 - 0.0012 17.9 0.0 0.12 11.3 0.0 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 AID31264.1 - 0.0073 16.5 0.3 0.087 13.0 0.0 2.9 3 1 1 4 4 4 1 AAA domain FtsK_SpoIIIE PF01580.18 AID31264.1 - 0.0084 15.5 0.1 0.035 13.5 0.0 2.0 2 0 0 2 2 2 1 FtsK/SpoIIIE family NACHT PF05729.12 AID31264.1 - 0.011 15.6 0.0 0.026 14.5 0.0 1.6 1 0 0 1 1 1 0 NACHT domain HTH_36 PF13730.6 AID31264.1 - 0.022 14.7 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 AID31264.1 - 0.067 13.7 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter Viral_helicase1 PF01443.18 AID31264.1 - 0.15 11.8 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 AID31264.1 - 0.16 11.1 0.0 0.35 10.1 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RsgA_GTPase PF03193.16 AID31264.1 - 0.19 11.7 0.0 0.48 10.3 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase GST_C PF00043.25 AID31265.1 - 3.5e-10 39.9 0.0 5.1e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID31265.1 - 1.6e-09 37.7 0.6 3.9e-09 36.4 0.6 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID31265.1 - 2.1e-05 24.7 0.0 3.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 AID31265.1 - 0.005 17.2 0.0 0.0095 16.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID31265.1 - 0.015 15.6 0.0 0.029 14.7 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF559 PF04480.12 AID31267.1 - 4.1e-38 129.6 0.0 4.8e-38 129.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 AID31267.1 - 1.7e-11 44.1 0.1 2.1e-11 43.8 0.1 1.1 1 0 0 1 1 1 1 REase_MTES_1575 Ehbp PF10622.9 AID31267.1 - 0.12 12.4 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Energy-converting hydrogenase B subunit P (EhbP) Aldo_ket_red PF00248.21 AID31268.1 - 1.1e-43 149.6 0.0 2.1e-41 142.0 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family PQQ_2 PF13360.6 AID31269.1 - 9.5e-10 38.5 0.3 3.3e-06 26.9 0.2 2.8 1 1 1 2 2 2 2 PQQ-like domain Glu_cyclase_2 PF05096.12 AID31269.1 - 1e-09 38.2 0.0 0.0069 15.9 0.0 3.9 3 1 1 4 4 4 3 Glutamine cyclotransferase SGL PF08450.12 AID31269.1 - 1.8e-09 37.5 0.0 0.005 16.5 0.0 3.4 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region PepSY PF03413.19 AID31269.1 - 0.00045 20.7 0.0 4 8.1 0.0 3.3 3 0 0 3 3 3 1 Peptidase propeptide and YPEB domain DUF5074 PF16819.5 AID31269.1 - 0.001 19.1 0.0 16 5.6 0.0 3.6 1 1 2 3 3 3 2 Domain of unknown function (DUF5074) Arylsulfotran_2 PF14269.6 AID31269.1 - 0.018 14.4 0.0 5.4 6.3 0.0 2.4 1 1 1 2 2 2 0 Arylsulfotransferase (ASST) UvrB_inter PF17757.1 AID31269.1 - 0.14 12.4 0.0 72 3.7 0.1 3.6 4 0 0 4 4 4 0 UvrB interaction domain HTH_29 PF13551.6 AID31270.1 - 0.016 15.2 0.1 0.04 13.9 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Trans_reg_C PF00486.28 AID31270.1 - 0.018 15.1 0.0 0.037 14.1 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulatory protein, C terminal HTH_15 PF12324.8 AID31270.1 - 0.035 14.0 1.5 0.082 12.9 0.3 2.2 3 0 0 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase HTH_20 PF12840.7 AID31270.1 - 0.052 13.6 0.3 0.052 13.6 0.3 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain GntR PF00392.21 AID31270.1 - 0.055 13.1 0.2 0.13 11.9 0.2 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family TBPIP PF07106.13 AID31270.1 - 0.24 11.4 0.0 0.44 10.5 0.0 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain Bd3614_N PF14442.6 AID31270.1 - 0.31 11.4 3.8 0.29 11.5 0.7 2.4 1 1 2 3 3 3 0 Bd3614-like deaminase N-terminal TPR_4 PF07721.14 AID31271.1 - 0.41 11.4 8.4 2.9 8.8 1.0 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF899 PF05988.12 AID31272.1 - 1.6e-80 269.7 0.1 1.9e-80 269.4 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) ADH_zinc_N PF00107.26 AID31274.1 - 1.1e-29 103.0 0.1 2e-29 102.2 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID31274.1 - 1.9e-18 67.8 0.0 4.6e-18 66.6 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID31274.1 - 2.6e-08 33.7 0.0 6.6e-08 32.4 0.0 1.7 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 AID31274.1 - 3.5e-05 23.4 0.0 7.2e-05 22.4 0.0 1.4 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 AID31274.1 - 4.1e-05 23.0 0.2 6.1e-05 22.4 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain GTP_EFTU_D2 PF03144.25 AID31274.1 - 0.024 15.0 0.1 0.072 13.5 0.0 1.8 2 0 0 2 2 2 0 Elongation factor Tu domain 2 2-Hacid_dh_C PF02826.19 AID31274.1 - 0.033 13.5 0.0 0.081 12.3 0.0 1.6 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_N_2 PF16884.5 AID31274.1 - 0.042 13.7 0.0 0.092 12.6 0.0 1.5 1 1 0 1 1 1 0 N-terminal domain of oxidoreductase ABC_tran PF00005.27 AID31275.1 - 6.7e-21 75.2 0.0 1.3e-20 74.3 0.0 1.5 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID31275.1 - 6.2e-14 52.5 0.2 1.2e-06 28.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID31275.1 - 0.00039 20.1 0.2 0.00072 19.2 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID31275.1 - 0.0015 19.0 0.1 0.0022 18.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 AID31275.1 - 0.0032 17.0 0.0 0.0044 16.5 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein MeaB PF03308.16 AID31275.1 - 0.0059 15.6 0.4 0.01 14.8 0.4 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 AID31275.1 - 0.018 15.4 1.1 0.042 14.2 0.5 2.1 1 1 1 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 AID31275.1 - 0.019 14.4 0.1 0.12 11.8 0.1 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID31275.1 - 0.03 14.0 0.0 0.056 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID31275.1 - 0.032 14.3 0.1 0.055 13.6 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 AID31275.1 - 0.034 13.9 0.4 0.22 11.2 0.2 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_28 PF13521.6 AID31275.1 - 0.083 13.1 0.1 0.23 11.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID31275.1 - 0.1 11.9 0.1 0.18 11.1 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 AID31275.1 - 0.15 12.0 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 AID31275.1 - 0.2 10.8 0.1 0.29 10.3 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 AID31275.1 - 0.27 11.1 0.3 0.5 10.2 0.1 1.5 2 0 0 2 2 2 0 RsgA GTPase Metal_resist PF13801.6 AID31277.1 - 1.5e-15 57.5 11.6 6.9e-15 55.3 11.6 1.8 1 1 0 1 1 1 1 Heavy-metal resistance Mit_ribos_Mrp51 PF11709.8 AID31277.1 - 0.044 13.4 0.1 0.05 13.2 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit DUF3426 PF11906.8 AID31278.1 - 0.016 15.4 0.2 0.029 14.5 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3426) Sigma70_r2 PF04542.14 AID31279.1 - 2e-22 78.8 2.0 3.7e-22 77.9 2.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID31279.1 - 1.2e-12 47.3 0.2 2.3e-12 46.4 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID31279.1 - 5.8e-07 28.9 0.4 5.8e-07 28.9 0.4 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 EF-hand_5 PF13202.6 AID31281.1 - 7.7e-27 91.6 7.7 6e-06 25.5 0.2 4.1 4 0 0 4 4 4 4 EF hand EF-hand_1 PF00036.32 AID31281.1 - 1.9e-24 83.3 1.8 0.00017 20.9 0.0 4.1 3 1 1 4 4 4 4 EF hand EF-hand_6 PF13405.6 AID31281.1 - 7.7e-21 72.2 2.4 0.00044 19.9 0.1 4.1 3 1 1 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 AID31281.1 - 9.8e-20 70.8 1.7 4.5e-09 36.6 0.1 3.4 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 AID31281.1 - 9.5e-17 60.6 1.9 0.0074 16.1 0.0 4.1 4 0 0 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 AID31281.1 - 1.4e-07 31.9 0.0 0.0099 16.2 0.0 3.8 1 1 3 4 4 4 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 AID31281.1 - 2.9e-06 27.4 6.4 0.083 13.1 0.7 3.9 2 1 2 4 4 4 3 Dockerin type I domain TerB PF05099.13 AID31281.1 - 0.0024 17.8 1.7 2.6 8.0 0.2 3.1 2 1 1 3 3 3 2 Tellurite resistance protein TerB EF-hand_10 PF14788.6 AID31281.1 - 0.01 15.6 0.2 0.59 10.0 0.1 2.8 2 2 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 AID31281.1 - 0.017 15.1 0.0 0.061 13.3 0.0 1.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand ProQ PF04352.13 AID31281.1 - 0.3 11.0 1.6 3.2 7.7 0.1 2.4 1 1 1 2 2 2 0 ProQ/FINO family Excalibur PF05901.11 AID31281.1 - 2.5 8.8 11.2 2.1 9.0 1.0 3.6 3 1 1 4 4 4 0 Excalibur calcium-binding domain EF-hand_1 PF00036.32 AID31282.1 - 3.1e-22 76.4 0.5 0.00011 21.5 0.1 4.3 3 1 1 4 4 4 4 EF hand EF-hand_5 PF13202.6 AID31282.1 - 1e-21 75.4 3.0 2e-06 27.0 0.1 4.6 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 AID31282.1 - 4.2e-19 66.8 1.3 0.0015 18.3 0.1 4.3 3 1 1 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 AID31282.1 - 2.2e-16 60.1 4.0 2.7e-08 34.1 0.2 3.2 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 AID31282.1 - 2.4e-11 43.3 0.2 0.0034 17.2 0.0 4.2 4 0 0 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 AID31282.1 - 8.1e-05 22.9 0.0 2.2 8.6 0.0 3.5 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 AID31282.1 - 0.0015 18.3 0.1 0.18 11.7 0.0 3.2 3 1 1 4 4 4 1 EF hand BA14K PF07886.11 AID31283.1 - 1.1e-12 47.5 7.9 1.1e-12 47.5 7.9 2.2 2 0 0 2 2 2 1 BA14K-like protein Glyoxalase_6 PF18029.1 AID31284.1 - 0.045 14.6 0.0 0.055 14.3 0.0 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain DUF365 PF04033.12 AID31286.1 - 0.18 12.1 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF365) Bestrophin PF01062.21 AID31287.1 - 1e-20 74.3 0.1 1.4e-20 73.9 0.1 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF2304 PF10066.9 AID31287.1 - 1.6 9.0 3.7 0.47 10.7 0.3 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Peripla_BP_4 PF13407.6 AID31288.1 - 3.4e-35 121.9 3.4 4.5e-35 121.5 3.4 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 AID31288.1 - 9.5e-05 22.8 0.0 0.0026 18.1 0.0 2.5 1 1 1 2 2 2 1 Periplasmic binding protein-like domain BPD_transp_2 PF02653.16 AID31289.1 - 4.8e-50 170.2 39.5 4.8e-50 170.2 39.5 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF2304 PF10066.9 AID31289.1 - 0.0019 18.4 3.8 0.0019 18.4 3.8 2.6 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2304) ABC_tran PF00005.27 AID31290.1 - 1.8e-44 151.6 0.0 1.2e-25 90.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31290.1 - 2.3e-09 37.5 0.0 0.0011 18.9 0.0 3.2 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID31290.1 - 0.00038 20.2 0.6 0.0038 16.9 0.1 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.6 AID31290.1 - 0.0035 16.9 0.4 0.023 14.3 0.4 2.1 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 AID31290.1 - 0.0093 16.2 0.1 17 5.8 0.0 3.2 2 1 1 3 3 3 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 AID31290.1 - 0.039 13.9 1.4 0.047 13.6 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase Rad17 PF03215.15 AID31290.1 - 0.04 13.8 0.0 0.16 11.8 0.0 1.9 3 0 0 3 3 3 0 Rad17 P-loop domain AAA_23 PF13476.6 AID31290.1 - 0.057 13.9 0.0 0.1 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 AID31290.1 - 0.11 12.0 0.6 3.7 6.9 0.1 2.9 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 AID31290.1 - 0.17 11.6 0.2 31 4.3 0.1 2.7 3 0 0 3 3 3 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 AID31290.1 - 0.17 11.9 0.1 1.5 9.0 0.0 2.4 3 0 0 3 3 3 0 50S ribosome-binding GTPase LysR_substrate PF03466.20 AID31290.1 - 0.25 10.7 3.4 5 6.4 0.3 3.1 3 0 0 3 3 3 0 LysR substrate binding domain AAA_15 PF13175.6 AID31290.1 - 0.31 10.7 0.0 0.58 9.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 AID31290.1 - 0.38 10.4 3.3 0.47 10.1 0.4 2.7 3 1 0 3 3 3 0 AAA domain DeoRC PF00455.22 AID31291.1 - 6.2e-45 153.0 0.1 8.3e-45 152.6 0.1 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID31291.1 - 2.3e-09 36.8 0.1 4.4e-09 36.0 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_17 PF12728.7 AID31291.1 - 0.0066 16.6 0.1 0.017 15.3 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID31291.1 - 0.008 16.0 0.1 0.021 14.6 0.1 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.12 AID31291.1 - 0.0092 15.9 0.1 0.022 14.7 0.1 1.6 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.16 AID31291.1 - 0.087 12.4 0.1 0.17 11.4 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Mga PF08280.11 AID31291.1 - 0.094 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_8 PF02954.19 AID31291.1 - 0.16 11.8 0.1 0.43 10.4 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family TetR_N PF00440.23 AID31292.1 - 2e-15 56.3 0.1 6.4e-15 54.7 0.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID31292.1 - 0.00015 22.0 0.7 0.00015 22.0 0.7 2.7 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain LacI PF00356.21 AID31292.1 - 0.0007 19.3 0.0 1.3 8.9 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory proteins, lacI family TetR_C_29 PF17938.1 AID31292.1 - 0.0053 16.8 0.0 0.014 15.5 0.0 1.7 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 AID31292.1 - 0.023 15.0 0.8 0.067 13.4 0.0 2.2 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Fer2_2 PF01799.20 AID31293.1 - 3.8e-31 106.9 1.4 3.8e-31 106.9 1.4 2.0 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID31293.1 - 3.5e-10 39.7 0.8 3.5e-10 39.7 0.8 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID31293.1 - 4.1e-07 30.0 0.5 1e-06 28.7 0.5 1.7 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 AID31293.1 - 0.013 15.5 0.4 0.091 12.8 0.4 2.2 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain BIR PF00653.21 AID31293.1 - 0.12 13.1 0.3 6.2 7.5 0.0 2.2 2 0 0 2 2 2 0 Inhibitor of Apoptosis domain FAD_binding_5 PF00941.21 AID31294.1 - 6.5e-48 162.7 0.0 8.9e-48 162.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID31294.1 - 5.3e-18 65.1 0.4 1.7e-17 63.5 0.5 1.8 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain FAD_binding_4 PF01565.23 AID31294.1 - 0.012 15.3 0.1 0.037 13.8 0.1 1.8 1 1 0 1 1 1 0 FAD binding domain Ald_Xan_dh_C2 PF02738.18 AID31295.1 - 3.2e-123 412.1 0.1 4.4e-123 411.6 0.1 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID31295.1 - 1e-19 70.9 0.2 2.2e-19 69.8 0.2 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ADH_zinc_N PF00107.26 AID31296.1 - 1.9e-31 108.7 1.2 2.4e-31 108.4 1.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID31296.1 - 1e-15 58.9 0.1 1.9e-15 58.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 AID31296.1 - 0.014 15.7 0.0 0.025 14.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 AID31296.1 - 0.024 13.9 0.9 0.034 13.4 0.5 1.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 AID31296.1 - 0.048 13.9 0.2 0.068 13.4 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain LysR_substrate PF03466.20 AID31297.1 - 4e-45 153.8 3.9 6.6e-45 153.0 3.9 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31297.1 - 4.3e-16 58.6 5.9 8.4e-16 57.7 5.9 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family cNMP_binding PF00027.29 AID31298.1 - 0.18 11.9 0.0 0.46 10.6 0.0 1.6 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain EamA PF00892.20 AID31299.1 - 3.3e-21 75.9 37.8 2.3e-15 56.9 15.5 2.3 2 1 0 2 2 2 2 EamA-like transporter family ABC_trans_CmpB PF06541.11 AID31299.1 - 0.033 14.4 0.4 0.033 14.4 0.4 2.6 2 2 0 2 2 2 0 Putative ABC-transporter type IV Asp_Arg_Hydrox PF05118.15 AID31300.1 - 1.6e-38 132.0 0.0 1.9e-38 131.7 0.0 1.1 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Cupin_2 PF07883.11 AID31300.1 - 0.024 14.3 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 Cupin domain Acyl_transf_3 PF01757.22 AID31301.1 - 7.9e-27 94.2 32.1 9.4e-27 94.0 32.1 1.0 1 0 0 1 1 1 1 Acyltransferase family Glycos_transf_2 PF00535.26 AID31302.1 - 1.7e-30 106.1 0.0 2.7e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID31302.1 - 3.3e-16 59.9 0.2 5.9e-16 59.0 0.2 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 AID31302.1 - 1.8e-10 40.8 0.0 0.00012 21.6 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID31302.1 - 0.0011 19.4 0.0 0.0062 17.0 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 AID31303.1 - 4.6e-23 81.9 0.0 6.4e-23 81.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID31303.1 - 7.4e-17 62.0 0.9 6.7e-16 58.9 0.9 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 AID31303.1 - 8.2e-11 41.9 0.0 9.9e-09 35.1 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 AID31303.1 - 0.00019 21.0 0.0 0.00082 18.9 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 AID31303.1 - 0.0005 20.0 0.0 0.00074 19.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_5 PF13712.6 AID31303.1 - 0.0026 17.5 0.0 0.2 11.3 0.0 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_tranf_2_4 PF13704.6 AID31303.1 - 0.0043 17.5 0.0 0.016 15.7 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 Rhamno_transf PF11316.8 AID31303.1 - 0.012 15.0 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Putative rhamnosyl transferase ABC_tran PF00005.27 AID31304.1 - 4.2e-33 114.8 0.0 7.6e-33 113.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID31304.1 - 1.5e-19 70.7 10.4 2.1e-19 70.2 10.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 AID31304.1 - 0.00018 22.0 0.4 0.00041 20.8 0.4 1.6 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 AID31304.1 - 0.00097 18.9 0.1 1.9 8.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_30 PF13604.6 AID31304.1 - 0.0011 18.7 0.1 0.0033 17.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID31304.1 - 0.0011 18.4 0.1 0.066 12.6 0.0 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID31304.1 - 0.0013 19.0 1.7 0.018 15.4 0.6 2.5 2 1 0 2 2 1 1 AAA domain AAA_29 PF13555.6 AID31304.1 - 0.0016 18.2 0.0 0.0039 16.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31304.1 - 0.0017 18.3 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID31304.1 - 0.051 14.1 0.0 0.089 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 AID31304.1 - 0.058 13.2 0.6 2.7 7.7 0.1 2.2 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 AID31304.1 - 0.064 12.8 0.0 2.6 7.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID31304.1 - 0.071 13.2 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase TNV_CP PF03898.13 AID31304.1 - 0.085 12.1 0.0 0.17 11.1 0.0 1.4 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein CobA_CobO_BtuR PF02572.15 AID31304.1 - 0.1 12.9 0.0 0.3 11.3 0.0 1.8 2 0 0 2 2 2 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_24 PF13479.6 AID31304.1 - 0.2 11.3 0.0 0.39 10.4 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID31304.1 - 0.22 11.2 0.0 0.3 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain MinE PF03776.14 AID31305.1 - 3.3e-20 71.9 1.0 3.8e-20 71.6 1.0 1.1 1 0 0 1 1 1 1 Septum formation topological specificity factor MinE A_thal_3526 PF09713.10 AID31305.1 - 0.14 12.4 0.3 2.6 8.4 0.0 2.1 1 1 1 2 2 2 0 Plant protein 1589 of unknown function (A_thal_3526) CbiA PF01656.23 AID31306.1 - 9.8e-22 77.4 0.2 1.3e-21 77.0 0.2 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 AID31306.1 - 3.6e-19 69.4 0.0 7.6e-19 68.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 AID31306.1 - 2e-15 57.0 2.9 5.3e-14 52.3 2.9 2.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 AID31306.1 - 1.3e-10 41.1 2.6 2.8e-10 39.9 2.6 1.5 1 1 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 AID31306.1 - 3.6e-09 36.5 0.1 7.6e-09 35.4 0.1 1.4 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 AID31306.1 - 1.6e-07 31.1 0.1 0.00038 20.0 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 AID31306.1 - 4.2e-07 29.5 5.0 2.2e-06 27.1 3.6 2.0 2 0 0 2 2 2 1 Anion-transporting ATPase SRP54 PF00448.22 AID31306.1 - 0.00011 22.0 4.9 0.0076 15.9 3.2 2.2 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain VirC1 PF07015.11 AID31306.1 - 0.00015 21.1 1.1 0.00024 20.5 0.5 1.5 2 0 0 2 2 2 1 VirC1 protein AAA_24 PF13479.6 AID31306.1 - 0.0022 17.8 0.0 0.003 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 AID31306.1 - 0.0052 16.6 0.2 0.0095 15.7 0.2 1.4 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 AID31306.1 - 0.0058 15.7 1.4 0.02 13.9 1.4 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 AID31306.1 - 0.027 14.0 4.8 0.053 13.1 4.8 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID31306.1 - 0.094 12.4 0.2 0.16 11.7 0.2 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein ATP_bind_1 PF03029.17 AID31306.1 - 0.18 11.6 0.1 0.29 10.9 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 AID31306.1 - 0.37 10.5 3.9 0.74 9.5 3.9 1.5 1 0 0 1 1 1 0 AAA domain AAA_26 PF13500.6 AID31306.1 - 1.8 8.3 5.7 16 5.2 0.0 2.5 2 1 0 2 2 2 0 AAA domain MinC_C PF03775.16 AID31307.1 - 3.8e-28 97.5 0.3 6.1e-28 96.8 0.3 1.3 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain FapA PF03961.13 AID31307.1 - 0.01 14.5 2.6 0.013 14.2 0.6 1.8 1 1 1 2 2 2 1 Flagellar Assembly Protein A MinC_N PF05209.13 AID31307.1 - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Septum formation inhibitor MinC, N-terminal domain MEDS PF14417.6 AID31308.1 - 4.1e-44 150.3 1.2 9.8e-43 145.8 0.2 2.2 1 1 1 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain GerE PF00196.19 AID31308.1 - 1.3e-17 63.1 0.5 2.4e-17 62.2 0.3 1.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID31308.1 - 0.00016 21.2 0.1 0.00034 20.2 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID31308.1 - 0.00097 19.1 0.3 0.0015 18.5 0.3 1.2 1 0 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 AID31308.1 - 0.0052 16.6 0.2 0.014 15.2 0.2 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 AID31308.1 - 0.074 12.8 0.4 0.17 11.7 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1117 PF06547.12 AID31308.1 - 0.13 12.8 0.1 0.27 11.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) EAL PF00563.20 AID31309.1 - 6.7e-65 218.9 0.0 1.1e-64 218.3 0.0 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID31309.1 - 4.5e-21 75.3 0.1 8.8e-21 74.3 0.1 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_9 PF13426.7 AID31309.1 - 5.8e-19 68.3 0.0 1.8e-18 66.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 AID31309.1 - 2.9e-10 40.4 0.0 6.8e-10 39.2 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 AID31309.1 - 1.4e-09 37.9 0.0 2.9e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 AID31309.1 - 1.9e-09 37.7 0.2 5.3e-09 36.2 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 AID31309.1 - 1.5e-06 28.1 0.0 5e-06 26.4 0.0 1.9 1 0 0 1 1 1 1 PAS domain GGDEF_2 PF17853.1 AID31309.1 - 0.095 13.0 0.4 0.4 11.0 0.2 2.1 1 1 0 1 1 1 0 GGDEF-like domain HSP20 PF00011.21 AID31310.1 - 4.8e-16 58.8 0.1 7e-16 58.2 0.1 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID31310.1 - 0.00021 20.8 0.0 0.00037 20.0 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA Arm-DNA-bind_4 PF14657.6 AID31314.1 - 0.42 10.4 8.5 1.5 8.6 8.5 2.0 1 1 0 1 1 1 0 Arm DNA-binding domain DUF2934 PF11154.8 AID31315.1 - 2.7e-11 43.0 10.5 5.8e-11 41.9 10.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2934) DUF3606 PF12244.8 AID31315.1 - 0.016 15.1 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) DUF4119 PF13494.6 AID31315.1 - 0.032 14.4 0.0 0.055 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) DUF3791 PF12668.7 AID31315.1 - 0.18 11.8 0.0 1.6 8.8 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3791) DUF680 PF05079.12 AID31316.1 - 9.2e-05 23.1 0.7 0.00015 22.4 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF680) Fim-adh_lectin PF09222.10 AID31316.1 - 0.064 12.8 0.4 6.2 6.3 0.0 2.0 1 1 1 2 2 2 0 Fimbrial adhesin F17-AG, lectin domain CbiN PF02553.15 AID31316.1 - 0.065 13.2 0.0 0.088 12.8 0.0 1.3 1 0 0 1 1 1 0 Cobalt transport protein component CbiN BA14K PF07886.11 AID31317.1 - 1.5e-29 101.5 22.2 6.9e-15 54.6 6.0 2.3 2 0 0 2 2 2 2 BA14K-like protein DoxX PF07681.12 AID31318.1 - 4.3e-09 36.8 13.8 4.3e-09 36.8 13.8 1.6 2 0 0 2 2 2 1 DoxX DoxD PF04173.13 AID31318.1 - 0.0036 17.2 0.6 0.0063 16.4 0.3 1.5 1 1 0 1 1 1 1 TQO small subunit DoxD SURF4 PF02077.15 AID31318.1 - 0.042 13.4 2.1 0.2 11.2 2.1 1.8 1 1 0 1 1 1 0 SURF4 family TPR_12 PF13424.6 AID31319.1 - 1.5e-12 47.6 1.1 3.7e-07 30.3 0.2 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID31319.1 - 8.5e-11 41.2 1.4 1.6e-06 27.9 0.0 3.0 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID31319.1 - 1.4e-10 41.6 2.5 5.3e-05 23.8 1.2 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 AID31319.1 - 6.6e-10 39.4 8.5 6.9e-09 36.1 0.4 2.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID31319.1 - 1.1e-09 37.6 5.2 1.6e-06 27.8 0.0 3.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID31319.1 - 1.4e-09 37.3 2.4 1.5e-07 30.9 0.0 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 AID31319.1 - 4e-08 32.8 3.2 1.1e-05 25.0 0.1 2.8 1 1 1 2 2 2 2 TPR repeat TPR_17 PF13431.6 AID31319.1 - 1.2e-07 31.6 0.7 0.018 15.4 0.2 2.6 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID31319.1 - 2.2e-06 28.0 2.7 0.00029 21.4 0.0 3.0 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 AID31319.1 - 4.2e-06 26.2 0.5 5.5e-06 25.8 0.5 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.6 AID31319.1 - 1.7e-05 24.9 0.4 0.00015 21.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 AID31319.1 - 5.6e-05 22.9 2.4 0.053 13.6 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 AID31319.1 - 0.00012 22.5 3.8 0.56 11.0 0.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_21 PF09976.9 AID31319.1 - 0.0016 18.2 4.9 0.014 15.1 2.2 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat-like domain ANAPC3 PF12895.7 AID31319.1 - 0.0021 18.2 1.6 0.0071 16.5 0.3 2.1 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 AID31319.1 - 0.005 16.7 1.4 0.068 13.1 0.0 3.0 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_MalT PF17874.1 AID31319.1 - 0.03 13.7 0.4 0.16 11.3 0.0 1.8 1 1 1 2 2 2 0 MalT-like TPR region SHNi-TPR PF10516.9 AID31319.1 - 0.44 10.0 4.1 17 4.9 0.0 3.9 4 0 0 4 4 4 0 SHNi-TPR TPR_20 PF14561.6 AID31319.1 - 0.52 10.7 5.3 3 8.2 0.1 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat Lactamase_B PF00753.27 AID31320.1 - 2.6e-21 76.5 0.1 3.6e-21 76.1 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID31320.1 - 0.00022 20.8 0.0 0.00042 19.9 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain TAT_signal PF10518.9 AID31320.1 - 0.0065 16.3 2.8 0.017 14.9 2.8 1.7 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence DUF680 PF05079.12 AID31321.1 - 2.9e-13 50.3 4.9 6.1e-13 49.3 4.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF680) DUF3357 PF11837.8 AID31321.1 - 0.038 14.4 0.0 0.045 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) PepSY_2 PF13670.6 AID31321.1 - 0.24 11.4 1.9 0.37 10.8 1.7 1.4 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain PTPS_related PF10131.9 AID31321.1 - 0.24 9.7 0.0 0.25 9.6 0.0 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein AMP-binding PF00501.28 AID31323.1 - 1.2e-94 317.3 0.0 1.9e-94 316.7 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID31323.1 - 6.8e-11 43.0 0.1 4.6e-10 40.3 0.0 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Hexapep_2 PF14602.6 AID31323.1 - 2.4e-10 40.0 9.1 0.0023 17.7 0.1 6.3 6 1 0 6 6 6 2 Hexapeptide repeat of succinyl-transferase PP-binding PF00550.25 AID31323.1 - 2.3e-08 34.2 0.0 4.5e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Hexapep PF00132.24 AID31323.1 - 9.3e-06 25.2 11.8 0.62 9.9 0.1 7.0 8 1 0 8 8 8 3 Bacterial transferase hexapeptide (six repeats) Acetyltransf_1 PF00583.25 AID31324.1 - 2.3e-11 44.0 0.0 2.7e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 AID31324.1 - 3e-09 37.7 0.0 3.8e-09 37.4 0.0 1.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID31324.1 - 4e-07 30.0 0.0 5.1e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID31324.1 - 1.7e-06 28.3 0.0 2.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID31324.1 - 0.0019 18.1 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID31324.1 - 0.0055 16.8 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 AID31324.1 - 0.0061 16.3 0.0 0.0097 15.6 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain 4PPT_N PF17837.1 AID31325.1 - 3.2e-17 62.4 1.9 5.3e-17 61.7 0.8 1.9 2 0 0 2 2 2 1 4'-phosphopantetheinyl transferase N-terminal domain ACPS PF01648.20 AID31325.1 - 3.5e-06 27.1 0.0 6.7e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Radical_SAM PF04055.21 AID31326.1 - 6e-09 36.5 0.1 1.1e-08 35.6 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 AID31326.1 - 4.2e-07 30.3 0.0 6.7e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 AID31326.1 - 2.1e-06 27.8 0.0 3.7e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain LAM_C PF12544.8 AID31326.1 - 2.6e-06 27.6 0.0 4.6e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Phage_min_cap2 PF06152.11 AID31326.1 - 0.12 11.2 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Phage minor capsid protein 2 NmrA PF05368.13 AID31327.1 - 7.9e-35 120.5 0.0 8.9e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 AID31327.1 - 1.7e-14 54.1 0.7 4e-14 52.9 0.7 1.6 1 1 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID31327.1 - 3.1e-09 36.6 0.1 5.7e-06 26.0 0.1 2.2 2 0 0 2 2 2 2 NAD dependent epimerase/dehydratase family KR PF08659.10 AID31327.1 - 0.00037 20.4 0.2 0.00058 19.8 0.2 1.3 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 AID31327.1 - 0.00054 19.5 0.0 0.00075 19.0 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase adh_short PF00106.25 AID31327.1 - 0.043 13.3 0.0 0.071 12.6 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase 3Beta_HSD PF01073.19 AID31327.1 - 0.071 12.1 0.1 0.094 11.7 0.1 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family 3HCDH_N PF02737.18 AID31327.1 - 0.15 11.9 0.1 4 7.3 0.1 2.2 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1127 PF06568.11 AID31328.1 - 1.5e-05 24.6 6.3 2.2e-05 24.1 6.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) LysR_substrate PF03466.20 AID31329.1 - 7.9e-41 139.7 1.2 1e-40 139.3 1.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31329.1 - 1.8e-19 69.4 1.1 3.1e-19 68.7 1.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID31329.1 - 0.021 14.7 0.0 0.068 13.1 0.0 1.9 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 AID31329.1 - 0.073 13.2 1.4 0.49 10.5 0.1 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain Epimerase PF01370.21 AID31330.1 - 1.2e-22 80.6 0.0 1.8e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID31330.1 - 2.4e-14 53.0 0.0 2.9e-14 52.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 AID31330.1 - 2.1e-12 47.3 0.1 4.2e-12 46.3 0.1 1.5 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 AID31330.1 - 9.1e-12 45.0 0.0 6.2e-11 42.3 0.0 1.9 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 AID31330.1 - 8.8e-07 28.4 0.0 1.6e-06 27.5 0.0 1.4 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 AID31330.1 - 9.2e-06 25.4 0.0 0.00018 21.1 0.0 2.2 2 1 0 2 2 2 1 NmrA-like family adh_short PF00106.25 AID31330.1 - 0.0016 17.9 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Polysacc_synt_2 PF02719.15 AID31330.1 - 0.0022 17.2 0.0 0.029 13.5 0.0 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein KR PF08659.10 AID31330.1 - 0.073 13.0 0.1 0.38 10.6 0.1 2.0 1 1 0 1 1 1 0 KR domain Cupin_6 PF12852.7 AID31331.1 - 1e-38 132.9 0.8 1.7e-38 132.2 0.8 1.4 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 AID31331.1 - 5.5e-19 68.2 4.6 1.2e-18 67.1 4.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31331.1 - 1.2e-13 50.8 0.0 2.6e-07 30.6 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID31331.1 - 0.041 13.8 0.4 0.99 9.3 0.0 2.6 3 0 0 3 3 3 0 AraC-like ligand binding domain HTH_35 PF13693.6 AID31331.1 - 0.13 12.4 0.1 0.95 9.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Tautomerase PF01361.21 AID31332.1 - 3.1e-18 65.4 0.0 3.5e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme adh_short_C2 PF13561.6 AID31333.1 - 5.9e-58 196.2 7.1 7.5e-58 195.8 7.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31333.1 - 2.9e-49 167.2 3.5 3.5e-49 166.9 3.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31333.1 - 8.6e-12 45.3 1.3 1.3e-11 44.7 1.3 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31333.1 - 0.004 16.6 0.9 0.021 14.3 0.9 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family LysR_substrate PF03466.20 AID31334.1 - 1.5e-40 138.8 1.5 1.5e-40 138.8 1.5 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID31334.1 - 2.4e-17 62.6 2.6 3.9e-17 61.9 2.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID31334.1 - 0.0031 17.3 1.8 0.0062 16.3 1.1 1.9 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain DUF4424 PF14415.6 AID31334.1 - 0.0034 16.7 0.0 0.0079 15.5 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4424) HTH_AsnC-type PF13404.6 AID31334.1 - 0.033 14.0 0.8 0.12 12.3 0.8 2.0 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_28 PF13518.6 AID31334.1 - 0.037 14.2 0.2 0.086 13.0 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID31334.1 - 0.046 13.5 0.3 0.14 12.0 0.3 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 AID31334.1 - 0.066 13.1 1.8 0.29 11.1 0.4 2.8 3 0 0 3 3 3 0 MarR family HTH_20 PF12840.7 AID31334.1 - 0.16 12.1 2.5 0.43 10.7 0.8 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain IL11 PF07400.11 AID31334.1 - 0.2 11.3 0.0 0.38 10.4 0.0 1.4 1 0 0 1 1 1 0 Interleukin 11 CbtB PF09489.10 AID31335.1 - 0.013 15.6 0.8 0.013 15.6 0.8 2.2 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtB) DUF2157 PF09925.9 AID31335.1 - 0.27 11.0 0.0 0.27 11.0 0.0 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Peripla_BP_6 PF13458.6 AID31336.1 - 1.4e-73 248.6 0.0 1.6e-73 248.4 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID31336.1 - 5.4e-71 239.5 0.0 6.5e-71 239.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain HD_5 PF13487.6 AID31338.1 - 6.6e-22 77.5 0.1 1.8e-10 40.9 0.1 2.6 2 0 0 2 2 2 2 HD domain GerE PF00196.19 AID31338.1 - 1.7e-16 59.5 0.0 3.8e-16 58.4 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HD PF01966.22 AID31338.1 - 1.3e-11 44.8 0.0 3.5e-11 43.4 0.0 1.8 1 0 0 1 1 1 1 HD domain Sigma70_r4_2 PF08281.12 AID31338.1 - 4.3e-06 26.3 0.1 1.2e-05 24.9 0.1 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_20 PF12840.7 AID31338.1 - 7.3e-05 22.7 1.7 0.00043 20.3 0.2 2.9 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_10 PF04967.12 AID31338.1 - 0.0004 20.1 0.5 0.0028 17.4 0.1 2.7 3 0 0 3 3 3 1 HTH DNA binding domain HTH_23 PF13384.6 AID31338.1 - 0.00048 19.8 0.0 0.0027 17.4 0.0 2.4 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 AID31338.1 - 0.00054 19.4 0.1 0.019 14.4 0.0 2.7 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 AID31338.1 - 0.0087 16.1 0.1 0.043 13.8 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn helix HTH_3 PF01381.22 AID31338.1 - 0.029 14.4 0.0 0.11 12.6 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix HTH_28 PF13518.6 AID31338.1 - 0.037 14.2 2.1 0.11 12.6 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_24 PF13412.6 AID31338.1 - 0.053 13.1 0.1 0.22 11.1 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 AID31338.1 - 0.055 13.2 0.0 0.27 11.0 0.0 2.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 AID31338.1 - 0.063 13.4 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Sigma70_ECF PF07638.11 AID31338.1 - 0.091 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor LysR_substrate PF03466.20 AID31340.1 - 7.2e-19 68.0 1.9 8.9e-19 67.7 1.9 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Trans_reg_C PF00486.28 AID31341.1 - 2.1e-15 56.6 0.0 4.5e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal TPR_2 PF07719.17 AID31341.1 - 4.1e-11 42.1 7.4 0.26 11.5 0.0 6.4 8 0 0 8 8 7 4 Tetratricopeptide repeat TPR_1 PF00515.28 AID31341.1 - 2.3e-09 36.6 0.0 0.16 11.9 0.0 5.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID31341.1 - 6.2e-05 22.9 0.1 11 6.6 0.0 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 AID31341.1 - 0.00018 22.1 13.5 3.6 8.6 0.0 6.5 4 1 2 6 6 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 AID31341.1 - 0.00021 21.7 0.1 0.49 10.9 0.0 3.2 2 1 0 2 2 2 2 Tetratricopeptide repeat TolB_N PF04052.13 AID31341.1 - 0.00023 21.3 0.0 0.00066 19.8 0.0 1.8 1 0 0 1 1 1 1 TolB amino-terminal domain TPR_7 PF13176.6 AID31341.1 - 0.0041 17.1 0.9 12 6.2 0.0 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 AID31341.1 - 0.0084 16.4 13.0 4.6 7.6 0.2 5.5 4 3 1 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID31341.1 - 0.0099 16.5 13.0 0.13 12.9 0.0 5.0 4 1 2 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 AID31341.1 - 0.011 15.4 0.0 0.49 10.1 0.0 3.7 5 0 0 5 5 5 0 TPR repeat FlgO PF17680.1 AID31341.1 - 0.014 15.1 0.0 0.17 11.7 0.0 2.3 1 1 0 1 1 1 0 FlgO protein CsgG PF03783.14 AID31341.1 - 0.026 13.8 0.0 0.14 11.4 0.0 1.9 1 1 0 1 1 1 0 Curli production assembly/transport component CsgG TPR_10 PF13374.6 AID31341.1 - 0.064 13.1 1.4 64 3.6 0.0 4.6 6 0 0 6 6 6 0 Tetratricopeptide repeat ACC_epsilon PF13822.6 AID31341.1 - 0.095 13.4 1.5 0.16 12.7 0.0 2.2 2 0 0 2 2 1 0 Acyl-CoA carboxylase epsilon subunit TPR_6 PF13174.6 AID31341.1 - 0.58 10.9 4.4 35 5.3 0.0 4.5 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID31341.1 - 1.6 9.6 7.9 2.5 9.0 0.1 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat AAA_16 PF13191.6 AID31342.1 - 2.2e-19 70.4 3.5 2.9e-19 70.1 1.6 2.3 2 0 0 2 2 2 1 AAA ATPase domain Guanylate_cyc PF00211.20 AID31342.1 - 2.7e-14 53.2 0.0 1.3e-07 31.4 0.0 2.7 3 0 0 3 3 3 2 Adenylate and Guanylate cyclase catalytic domain MeaB PF03308.16 AID31342.1 - 0.00017 20.6 0.2 0.00052 19.1 0.0 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 AID31342.1 - 0.091 12.7 0.0 0.55 10.1 0.0 2.2 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 AID31342.1 - 0.11 12.7 0.0 0.38 11.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID31342.1 - 0.12 11.6 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin DUF2791 PF10923.8 AID31342.1 - 0.15 10.9 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) MMR_HSR1 PF01926.23 AID31342.1 - 0.21 11.7 0.0 0.48 10.5 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase TPR_12 PF13424.6 AID31342.1 - 0.24 11.7 6.5 3.3 8.1 1.5 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat PhoD PF09423.10 AID31343.1 - 2.1e-22 79.6 0.0 3.6e-22 78.8 0.0 1.3 1 0 0 1 1 1 1 PhoD-like phosphatase GMC_oxred_C PF05199.13 AID31343.1 - 8.1e-13 49.1 0.8 5.7e-12 46.4 0.1 2.4 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_N PF00732.19 AID31343.1 - 2.6e-11 43.5 0.0 4.3e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 AID31343.1 - 1.1e-05 25.3 2.9 0.0068 16.0 0.1 3.3 3 0 0 3 3 3 2 FAD dependent oxidoreductase Abhydrolase_1 PF00561.20 AID31343.1 - 2.8e-05 23.9 0.3 0.00017 21.3 0.1 2.3 2 0 0 2 2 2 1 alpha/beta hydrolase fold FAD_binding_2 PF00890.24 AID31343.1 - 0.0037 16.4 5.0 0.34 9.9 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain Lipase_2 PF01674.18 AID31343.1 - 0.061 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 2) Fer4_9 PF13187.6 AID31343.1 - 0.079 13.1 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID31343.1 - 0.11 13.1 0.2 0.23 12.1 0.2 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Pyr_redox_2 PF07992.14 AID31343.1 - 0.13 11.5 0.3 1.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Beta-lactamase PF00144.24 AID31346.1 - 3.6e-62 210.5 1.9 3.6e-62 210.5 1.9 1.4 2 0 0 2 2 2 1 Beta-lactamase DUF3471 PF11954.8 AID31346.1 - 3.9e-14 53.0 0.0 2.8e-13 50.2 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF3471) AMP-binding PF00501.28 AID31347.1 - 4.8e-77 259.3 0.0 6.1e-77 259.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID31347.1 - 7.2e-26 91.0 0.6 1.4e-25 90.1 0.6 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Golgin_A5 PF09787.9 AID31349.1 - 2.2 7.7 34.8 0.056 12.9 12.4 3.0 1 1 2 3 3 3 0 Golgin subfamily A member 5 PI3K_P85_iSH2 PF16454.5 AID31349.1 - 2.7 7.6 19.8 5.3 6.6 14.3 2.8 2 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ChiW_Ig_like PF18683.1 AID31349.1 - 5.8 7.2 9.0 2.9 8.2 1.7 2.7 2 0 0 2 2 2 0 Chitinase W immunoglobulin-like domain HIP1_clath_bdg PF16515.5 AID31349.1 - 7.2 7.3 36.6 0.09 13.4 2.0 4.5 2 1 2 4 4 4 0 Clathrin-binding domain of Huntingtin-interacting protein 1 IU_nuc_hydro PF01156.19 AID31350.1 - 2.6e-88 296.5 2.2 2.9e-88 296.4 2.2 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase DUF5448 PF17526.2 AID31352.1 - 0.045 13.9 0.0 0.049 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5448) HSP90 PF00183.18 AID31355.1 - 1.4e-109 367.3 0.0 1.9e-109 366.9 0.0 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c_3 PF13589.6 AID31355.1 - 1.7e-12 47.3 0.0 2.7e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 AID31355.1 - 3.1e-10 40.6 0.0 5e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BPD_transp_1 PF00528.22 AID31356.1 - 2.9e-13 49.9 7.4 2.9e-13 49.9 7.4 2.5 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID31357.1 - 1.2e-13 51.2 14.1 1.2e-13 51.2 14.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PgaD PF13994.6 AID31357.1 - 0.54 10.3 6.3 0.48 10.5 1.7 2.3 2 0 0 2 2 2 0 PgaD-like protein SBP_bac_8 PF13416.6 AID31358.1 - 5.1e-28 98.7 6.0 6.9e-28 98.3 6.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID31358.1 - 3.2e-23 82.4 0.4 5.4e-23 81.7 0.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 AID31358.1 - 0.001 18.8 4.8 0.0028 17.4 4.8 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 AID31358.1 - 0.0043 16.4 0.6 0.01 15.1 0.6 1.6 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UreF PF01730.16 AID31358.1 - 0.028 15.0 0.2 0.14 12.7 0.0 2.0 2 0 0 2 2 2 0 UreF ABC_tran PF00005.27 AID31359.1 - 3.1e-33 115.2 0.0 6.3e-33 114.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID31359.1 - 6e-15 55.2 0.1 2.4e-13 50.0 0.0 2.8 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID31359.1 - 1.1e-07 31.9 0.3 0.0039 17.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31359.1 - 0.00011 21.7 0.6 0.015 14.8 0.6 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID31359.1 - 0.00016 22.1 0.3 0.0022 18.4 0.3 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID31359.1 - 0.003 17.9 0.4 0.017 15.4 0.4 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31359.1 - 0.0033 17.8 0.1 0.0073 16.7 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 AID31359.1 - 0.0094 15.5 0.1 0.11 12.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID31359.1 - 0.015 15.1 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID31359.1 - 0.019 14.9 0.4 0.047 13.6 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 AID31359.1 - 0.026 15.0 0.4 0.046 14.2 0.1 1.5 2 0 0 2 2 1 0 AAA domain Mg_chelatase PF01078.21 AID31359.1 - 0.028 13.8 0.0 0.072 12.5 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 AID31359.1 - 0.032 14.2 0.1 0.1 12.6 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 AID31359.1 - 0.038 13.7 0.1 0.091 12.5 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain TniB PF05621.11 AID31359.1 - 0.038 13.4 0.3 3 7.2 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein Rad17 PF03215.15 AID31359.1 - 0.044 13.7 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ATPase PF06745.13 AID31359.1 - 0.05 12.9 0.8 2.5 7.4 0.1 2.1 2 0 0 2 2 2 0 KaiC TOBE PF03459.17 AID31359.1 - 0.055 13.8 0.2 0.43 10.9 0.0 2.6 3 1 0 3 3 3 0 TOBE domain NACHT PF05729.12 AID31359.1 - 0.064 13.2 0.2 0.11 12.4 0.2 1.4 1 0 0 1 1 1 0 NACHT domain ATP-synt_ab PF00006.25 AID31359.1 - 0.066 12.9 0.2 0.089 12.4 0.2 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 AID31359.1 - 0.075 12.7 0.2 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID31359.1 - 0.093 11.5 1.4 0.58 8.9 0.1 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NB-ARC PF00931.22 AID31359.1 - 0.11 11.7 0.3 0.17 11.0 0.3 1.2 1 0 0 1 1 1 0 NB-ARC domain TsaE PF02367.17 AID31359.1 - 0.17 11.9 0.1 0.32 11.0 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 AID31359.1 - 0.19 12.2 0.0 0.49 11.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_28 PF13521.6 AID31359.1 - 0.26 11.5 0.4 0.8 9.9 0.2 1.8 2 0 0 2 2 2 0 AAA domain ADAM_spacer1 PF05986.14 AID31360.1 - 0.14 12.2 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 ADAM-TS Spacer 1 HTH_18 PF12833.7 AID31361.1 - 1e-23 83.3 0.1 2.4e-23 82.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31361.1 - 4e-19 68.2 0.0 5.4e-10 39.1 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DJ-1_PfpI PF01965.24 AID31361.1 - 3.8e-10 39.8 0.0 5.5e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_23 PF13384.6 AID31361.1 - 0.014 15.2 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.12 AID31361.1 - 0.036 14.0 0.2 0.069 13.1 0.2 1.5 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 AID31361.1 - 0.16 12.3 0.0 0.34 11.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator EAL PF00563.20 AID31362.1 - 1.6e-64 217.7 0.1 2.6e-64 217.0 0.1 1.3 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID31362.1 - 1.1e-39 135.8 0.0 1.8e-39 135.1 0.0 1.4 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID31362.1 - 1.1e-18 67.2 0.0 2.7e-18 66.0 0.0 1.6 1 0 0 1 1 1 1 PAS fold CHASE PF03924.13 AID31362.1 - 8.3e-18 65.0 0.1 2.2e-17 63.6 0.1 1.7 1 0 0 1 1 1 1 CHASE domain PAS PF00989.25 AID31362.1 - 0.0065 16.5 0.0 0.017 15.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold GST_N PF02798.20 AID31365.1 - 8.9e-11 42.0 0.0 1.9e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 AID31365.1 - 2.9e-08 34.0 0.0 6.1e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID31365.1 - 0.00041 20.3 0.5 0.0007 19.6 0.5 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID31365.1 - 0.0058 16.9 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID31365.1 - 0.018 15.2 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 AID31365.1 - 0.17 12.1 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF3580 PF12117.8 AID31366.1 - 0.022 15.0 0.0 0.023 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3580) MMR_HSR1 PF01926.23 AID31366.1 - 0.18 11.9 0.0 0.2 11.7 0.0 1.0 1 0 0 1 1 1 0 50S ribosome-binding GTPase BrkDBD PF09607.10 AID31367.1 - 0.13 12.0 0.1 0.24 11.2 0.1 1.4 1 0 0 1 1 1 0 Brinker DNA-binding domain Glyoxalase_4 PF13669.6 AID31369.1 - 2.8e-11 43.7 0.0 3.3e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 AID31369.1 - 6.8e-10 39.2 0.0 9.7e-10 38.7 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID31369.1 - 8.7e-07 29.2 0.0 1.1e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID31369.1 - 0.0034 18.1 0.2 0.0059 17.4 0.2 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain HSBP1 PF06825.12 AID31369.1 - 0.16 11.9 1.1 0.18 11.7 0.1 1.6 2 0 0 2 2 2 0 Heat shock factor binding protein 1 N-glycanase_N PF09112.10 AID31369.1 - 0.22 11.3 0.0 0.26 11.1 0.0 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, N terminal Aldolase_II PF00596.21 AID31370.1 - 3.7e-48 163.9 1.8 5.2e-48 163.4 1.8 1.2 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain TetR_N PF00440.23 AID31371.1 - 4.4e-11 42.4 0.0 1.3e-10 40.9 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID31371.1 - 4.6e-05 23.6 4.0 8.8e-05 22.7 4.0 1.7 1 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF5076 PF16826.5 AID31371.1 - 0.071 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5076) BMC PF00936.19 AID31371.1 - 0.13 12.3 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 BMC domain FMN_dh PF01070.18 AID31372.1 - 1.3e-136 455.2 1.0 1.5e-136 455.0 1.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 AID31372.1 - 6.3e-05 22.5 1.0 0.00017 21.1 0.8 1.7 2 0 0 2 2 2 1 Nitronate monooxygenase IMPDH PF00478.25 AID31372.1 - 0.0018 17.3 1.2 0.004 16.2 0.2 2.0 2 1 1 3 3 3 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 AID31372.1 - 0.022 13.9 0.3 0.038 13.1 0.3 1.4 1 0 0 1 1 1 0 Conserved region in glutamate synthase His_biosynth PF00977.21 AID31372.1 - 0.031 13.7 0.0 0.066 12.7 0.0 1.6 1 0 0 1 1 1 0 Histidine biosynthesis protein DHO_dh PF01180.21 AID31372.1 - 0.17 11.0 0.3 0.29 10.3 0.3 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Trans_reg_C PF00486.28 AID31373.1 - 3.6e-15 55.8 0.0 6.7e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal TPR_2 PF07719.17 AID31373.1 - 5.1e-12 44.9 1.0 0.027 14.6 0.0 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID31373.1 - 1.7e-11 43.6 0.0 0.029 14.0 0.0 4.0 4 0 0 4 4 4 3 TPR repeat TPR_1 PF00515.28 AID31373.1 - 1.1e-09 37.7 0.0 0.28 11.1 0.0 4.6 5 0 0 5 5 4 3 Tetratricopeptide repeat FlgO PF17680.1 AID31373.1 - 1.3e-06 28.2 0.0 4.7e-06 26.3 0.0 1.8 1 1 0 1 1 1 1 FlgO protein TPR_17 PF13431.6 AID31373.1 - 5.6e-06 26.4 0.2 5.2 7.7 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID31373.1 - 7.2e-06 26.6 25.0 0.078 13.6 0.4 6.5 4 1 3 7 7 6 4 Tetratricopeptide repeat TPR_19 PF14559.6 AID31373.1 - 1e-05 25.9 2.3 0.5 10.9 0.0 3.9 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 AID31373.1 - 1.4e-05 25.3 6.5 0.0012 19.1 0.2 4.1 2 1 1 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID31373.1 - 2.8e-05 24.6 21.3 0.036 14.9 0.0 6.3 3 2 4 7 7 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 AID31373.1 - 0.0016 18.5 0.0 15 6.1 0.0 4.1 4 0 0 4 4 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 AID31373.1 - 0.0054 16.9 0.0 0.88 9.8 0.0 2.6 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF3280 PF11684.8 AID31373.1 - 0.011 16.2 0.2 0.049 14.0 0.0 2.2 3 0 0 3 3 2 0 Protein of unknown function (DUF2380) TPR_10 PF13374.6 AID31373.1 - 0.05 13.5 3.5 0.52 10.2 0.1 3.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 AID31373.1 - 0.065 13.1 0.9 0.16 11.9 0.2 2.0 2 0 0 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal HrpB1_HrpK PF09613.10 AID31373.1 - 0.074 12.7 0.6 1 9.0 0.0 2.8 2 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_9 PF13371.6 AID31373.1 - 0.092 12.9 0.4 0.092 12.9 0.4 2.9 4 1 0 4 4 3 0 Tetratricopeptide repeat ABC_tran PF00005.27 AID31374.1 - 2.6e-50 170.5 0.0 2.9e-26 92.6 0.0 2.8 3 0 0 3 3 2 2 ABC transporter ABC_tran_Xtn PF12848.7 AID31374.1 - 1.7e-26 92.0 14.3 5.5e-26 90.4 6.0 3.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 AID31374.1 - 1.4e-16 61.2 0.2 0.0056 16.5 0.0 4.2 4 0 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31374.1 - 2.2e-10 40.4 0.2 0.0036 16.8 0.0 4.2 4 0 0 4 4 4 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID31374.1 - 9.9e-07 28.8 0.0 0.027 14.4 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 AID31374.1 - 1.1e-06 29.3 6.7 0.011 16.2 0.2 3.5 4 0 0 4 4 3 2 AAA domain AAA_29 PF13555.6 AID31374.1 - 3.6e-06 26.6 0.1 0.046 13.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 AID31374.1 - 1.8e-05 24.8 0.0 0.021 14.9 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 AID31374.1 - 2.6e-05 24.7 0.2 0.14 12.5 0.0 2.8 3 0 0 3 3 2 2 AAA ATPase domain cobW PF02492.19 AID31374.1 - 3e-05 23.7 0.1 0.013 15.1 0.0 3.0 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain AAA_13 PF13166.6 AID31374.1 - 0.00028 19.7 0.8 0.44 9.1 0.0 3.3 3 1 0 4 4 4 2 AAA domain AAA_22 PF13401.6 AID31374.1 - 0.00033 20.9 1.3 0.29 11.4 0.1 3.1 2 2 0 2 2 2 1 AAA domain ATP-synt_ab PF00006.25 AID31374.1 - 0.00063 19.4 0.0 0.095 12.3 0.0 2.2 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 AID31374.1 - 0.00065 19.5 0.1 0.62 9.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 AID31374.1 - 0.00071 19.7 0.0 2.1 8.5 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA PF00004.29 AID31374.1 - 0.0012 19.3 1.0 1.3 9.4 0.0 3.2 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 AID31374.1 - 0.0016 19.0 0.0 2.6 8.6 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF3584 PF12128.8 AID31374.1 - 0.0021 15.7 3.9 0.37 8.3 0.0 2.9 3 0 0 3 3 3 2 Protein of unknown function (DUF3584) AAA_27 PF13514.6 AID31374.1 - 0.0023 17.6 0.0 1.2 8.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 AID31374.1 - 0.0058 16.6 0.2 2.4 8.0 0.0 2.5 2 0 0 2 2 2 1 NACHT domain TsaE PF02367.17 AID31374.1 - 0.0079 16.2 0.1 0.44 10.6 0.0 2.6 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Arf PF00025.21 AID31374.1 - 0.0085 15.6 0.0 4.4 6.7 0.0 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_28 PF13521.6 AID31374.1 - 0.0093 16.2 2.7 4.3 7.6 0.1 3.3 3 1 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 AID31374.1 - 0.013 15.3 0.1 4.4 7.0 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein Zeta_toxin PF06414.12 AID31374.1 - 0.013 14.8 3.8 0.51 9.6 0.1 2.9 3 0 0 3 3 3 0 Zeta toxin Roc PF08477.13 AID31374.1 - 0.02 15.1 0.1 0.7 10.1 0.0 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase SbcCD_C PF13558.6 AID31374.1 - 0.022 15.0 0.2 3.8 7.8 0.0 3.8 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 AID31374.1 - 0.027 13.7 0.3 1 8.5 0.1 2.5 3 0 0 3 3 3 0 NB-ARC domain NTPase_1 PF03266.15 AID31374.1 - 0.046 13.6 0.5 6.9 6.5 0.1 3.2 3 0 0 3 3 3 0 NTPase AAA_15 PF13175.6 AID31374.1 - 0.062 13.0 3.1 5.3 6.7 0.1 3.3 4 0 0 4 4 3 0 AAA ATPase domain PduV-EutP PF10662.9 AID31374.1 - 0.075 12.8 0.1 1 9.1 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 AID31374.1 - 0.076 12.5 0.0 0.53 9.8 0.0 2.1 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_7 PF12775.7 AID31374.1 - 0.076 12.5 0.0 2.3 7.7 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region MeaB PF03308.16 AID31374.1 - 0.08 11.9 0.1 8.4 5.3 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 AID31374.1 - 0.11 12.5 0.2 26 4.8 0.0 2.7 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 AID31374.1 - 0.12 12.0 0.5 7 6.2 0.1 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 AID31374.1 - 0.22 11.9 0.1 35 4.8 0.0 2.7 2 0 0 2 2 2 0 RNA helicase DLIC PF05783.11 AID31374.1 - 0.42 9.4 4.7 0.47 9.2 0.0 2.6 3 0 0 3 3 3 0 Dynein light intermediate chain (DLIC) ABC_tran_CTD PF16326.5 AID31374.1 - 0.44 10.8 6.8 0.077 13.2 1.4 2.3 2 0 0 2 2 2 0 ABC transporter C-terminal domain AAA_30 PF13604.6 AID31374.1 - 0.66 9.7 12.9 1.3 8.7 0.1 3.8 3 2 0 3 3 2 0 AAA domain E_Pc_C PF06752.12 AID31374.1 - 2.4 8.2 4.2 3.9 7.5 4.2 1.3 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus SelP_N PF04592.14 AID31376.1 - 0.085 12.2 14.9 0.088 12.2 14.9 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Spt46 PF17734.1 AID31376.1 - 0.19 11.5 2.0 0.25 11.1 2.0 1.3 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 NUDE_C PF04880.13 AID31376.1 - 0.57 10.7 5.4 0.66 10.4 5.4 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region DEC-1_N PF04625.13 AID31376.1 - 0.68 8.9 11.0 0.82 8.6 11.0 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Sporozoite_P67 PF05642.11 AID31376.1 - 2.5 6.1 7.0 3 5.8 7.0 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF2057 PF09829.9 AID31376.1 - 4.9 7.3 7.5 7.4 6.7 7.5 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) F420_oxidored PF03807.17 AID31377.1 - 4.4e-17 62.4 0.1 8.1e-17 61.6 0.1 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 AID31377.1 - 7.1e-05 23.0 0.5 0.00019 21.6 0.1 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 AID31377.1 - 0.0012 18.6 1.0 0.0024 17.5 1.0 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Rossmann-like PF10727.9 AID31377.1 - 0.002 18.0 3.8 0.0021 17.9 0.7 2.3 2 2 0 2 2 2 1 Rossmann-like domain 3HCDH_N PF02737.18 AID31377.1 - 0.0031 17.4 0.4 0.0095 15.8 0.7 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID31377.1 - 0.0039 17.2 0.5 0.43 10.5 0.5 2.3 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.6 AID31377.1 - 0.0062 16.4 0.5 0.017 15.0 0.3 1.8 2 0 0 2 2 2 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 AID31377.1 - 0.015 14.7 0.1 0.021 14.2 0.1 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 AID31377.1 - 0.023 14.3 0.0 0.054 13.1 0.1 1.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Nuc_deoxyrib_tr PF05014.15 AID31377.1 - 0.025 14.6 0.0 0.069 13.2 0.0 1.7 2 0 0 2 2 2 0 Nucleoside 2-deoxyribosyltransferase adh_short PF00106.25 AID31378.1 - 7.1e-45 152.9 0.0 8.7e-45 152.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31378.1 - 6e-37 127.4 0.4 7.4e-37 127.1 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31378.1 - 6.8e-08 32.6 0.4 1.1e-07 32.0 0.4 1.2 1 0 0 1 1 1 1 KR domain GST_N_3 PF13417.6 AID31380.1 - 2e-15 57.0 0.0 5e-15 55.7 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID31380.1 - 1.7e-11 44.2 0.0 4.5e-11 42.9 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID31380.1 - 3.4e-11 43.3 0.0 6.5e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID31380.1 - 1.8e-06 28.1 0.0 3.4e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID31380.1 - 2.7e-06 27.3 0.1 5.6e-06 26.3 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID31380.1 - 8e-05 22.8 0.0 0.00015 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 AID31380.1 - 0.0018 18.0 0.0 0.0032 17.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 AID31380.1 - 0.029 15.1 0.0 0.13 13.0 0.0 2.1 2 1 0 2 2 2 0 Glutathione S-transferase N-terminal domain OmdA PF13376.6 AID31381.1 - 2.8e-16 59.2 0.8 5.5e-16 58.3 0.8 1.5 1 0 0 1 1 1 1 Bacteriocin-protection, YdeI or OmpD-Associated FG-GAP PF01839.23 AID31382.1 - 0.0015 18.6 0.5 0.0034 17.5 0.5 1.6 1 0 0 1 1 1 1 FG-GAP repeat VCBS PF13517.6 AID31382.1 - 0.0028 18.2 1.1 0.041 14.5 0.0 2.6 2 1 1 3 3 3 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Cupin_2 PF07883.11 AID31383.1 - 2.7e-16 59.0 0.0 3.9e-16 58.5 0.0 1.3 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 AID31383.1 - 0.0049 16.8 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 AID31383.1 - 0.013 15.4 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_1 PF00190.22 AID31383.1 - 0.049 13.2 0.0 0.087 12.4 0.0 1.5 1 1 0 1 1 1 0 Cupin EutQ PF06249.12 AID31383.1 - 0.21 11.3 0.0 0.32 10.7 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ MarR_2 PF12802.7 AID31384.1 - 3.3e-07 30.1 0.1 7.1e-06 25.8 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 AID31384.1 - 0.0016 18.6 0.0 0.0034 17.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 AID31384.1 - 0.0031 17.4 0.0 0.0067 16.3 0.0 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID31384.1 - 0.0054 16.6 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 AID31384.1 - 0.01 16.3 0.0 0.053 14.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_36 PF13730.6 AID31384.1 - 0.014 15.4 0.0 0.042 13.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID31384.1 - 0.015 15.1 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_11 PF08279.12 AID31384.1 - 0.022 14.7 0.0 0.27 11.2 0.0 2.2 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 AID31384.1 - 0.07 12.7 0.1 0.19 11.3 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID31384.1 - 0.1 12.6 0.1 0.24 11.4 0.0 1.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain adh_short_C2 PF13561.6 AID31385.1 - 1.4e-06 28.1 0.0 1.5e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase LysR_substrate PF03466.20 AID31386.1 - 3.1e-49 167.2 8.1 3.1e-49 167.2 8.1 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID31386.1 - 6.3e-22 77.3 1.8 6.3e-22 77.3 1.8 2.1 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family SBP_bac_11 PF13531.6 AID31386.1 - 0.00029 20.6 0.4 0.00072 19.4 0.1 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein HTH_28 PF13518.6 AID31386.1 - 0.34 11.1 2.3 0.42 10.8 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain PDZ_2 PF13180.6 AID31387.1 - 4.8e-15 55.6 0.0 1.3e-14 54.3 0.0 1.7 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 AID31387.1 - 2.8e-13 51.0 1.0 4.2e-13 50.5 0.3 1.6 2 0 0 2 2 2 1 Trypsin-like peptidase domain PDZ_6 PF17820.1 AID31387.1 - 3.8e-07 29.8 0.2 8.2e-07 28.8 0.2 1.7 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 AID31387.1 - 0.00026 21.3 0.1 0.00048 20.4 0.1 1.4 1 0 0 1 1 1 1 PDZ domain DUF3394 PF11874.8 AID31387.1 - 0.16 11.7 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3394) GST_C_2 PF13410.6 AID31388.1 - 1.4e-08 34.6 0.1 3.4e-08 33.4 0.1 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 AID31388.1 - 8.3e-07 29.1 0.0 1.4e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID31388.1 - 3.8e-06 27.1 0.0 7.3e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID31388.1 - 4.4e-06 26.9 0.0 8.9e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID31388.1 - 1.3e-05 25.3 0.0 2.3e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 AID31388.1 - 0.0015 18.9 0.0 0.0027 18.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain FAM177 PF14774.6 AID31388.1 - 0.14 12.5 0.1 0.27 11.6 0.1 1.5 1 0 0 1 1 1 0 FAM177 family DUF1236 PF06823.12 AID31389.1 - 5.5e-20 71.0 1.6 5.5e-20 71.0 1.6 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1236) Sulfotransfer_4 PF17784.1 AID31391.1 - 2.5e-60 204.0 0.0 2.9e-60 203.8 0.0 1.0 1 0 0 1 1 1 1 Sulfotransferase domain SyrA PF11089.8 AID31392.1 - 5.1e-16 58.4 3.5 5.1e-16 58.4 3.5 1.4 1 1 0 1 1 1 1 Exopolysaccharide production repressor DUF4381 PF14316.6 AID31392.1 - 0.097 12.9 1.1 0.1 12.8 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF2244 PF10003.9 AID31392.1 - 0.11 12.2 3.6 0.12 12.1 3.6 1.0 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF4083 PF13314.6 AID31392.1 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Orthoreo_P10 PF07204.11 AID31392.1 - 0.13 12.3 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Pectate_lyase_3 PF12708.7 AID31394.1 - 3.4e-05 23.8 12.1 0.0028 17.5 0.2 3.5 1 1 2 3 3 3 3 Pectate lyase superfamily protein Amidohydro_3 PF07969.11 AID31395.1 - 3.5e-46 158.7 7.6 1.5e-45 156.6 7.6 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 AID31395.1 - 9.8e-08 31.7 2.6 7e-06 25.6 2.6 2.6 1 1 0 1 1 1 1 Amidohydrolase family Isochorismatase PF00857.20 AID31396.1 - 3.7e-24 85.8 0.0 4.3e-24 85.7 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family WD40 PF00400.32 AID31397.1 - 1.3e-39 133.4 14.9 5e-08 33.5 0.8 7.5 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 AID31397.1 - 1.1e-15 57.7 0.5 0.0044 17.3 0.1 5.4 1 1 5 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain Nbas_N PF15492.6 AID31397.1 - 6e-08 32.4 0.6 0.046 13.1 0.1 3.8 3 1 1 4 4 4 3 Neuroblastoma-amplified sequence, N terminal Ge1_WD40 PF16529.5 AID31397.1 - 4.4e-05 22.6 0.1 0.62 9.0 0.1 4.0 2 1 2 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 AID31397.1 - 4.7e-05 23.2 0.1 22 5.1 0.0 5.4 5 0 0 5 5 5 1 WD40-like Beta Propeller Repeat Nup160 PF11715.8 AID31397.1 - 7e-05 21.7 0.0 7 5.2 0.0 4.0 2 1 1 4 4 4 3 Nucleoporin Nup120/160 WD40_like PF17005.5 AID31397.1 - 0.0018 17.7 0.0 0.2 11.0 0.0 2.4 1 1 2 3 3 3 2 WD40-like domain Nucleoporin_N PF08801.11 AID31397.1 - 0.15 10.8 0.0 7.9 5.1 0.0 2.4 1 1 1 2 2 2 0 Nup133 N terminal like Exo_endo_phos PF03372.23 AID31399.1 - 2.5e-22 79.6 0.8 3.5e-22 79.1 0.8 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Hydrolase_4 PF12146.8 AID31400.1 - 2e-06 27.2 0.1 0.00028 20.2 0.1 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID31400.1 - 4.1e-06 27.6 0.1 5.9e-06 27.0 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID31400.1 - 0.00037 20.2 0.0 0.0017 18.1 0.0 1.8 1 1 1 2 2 2 1 alpha/beta hydrolase fold PGAP1 PF07819.13 AID31400.1 - 0.0006 19.6 0.0 0.00087 19.1 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_5 PF12695.7 AID31400.1 - 0.00094 19.0 0.1 0.013 15.3 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family DLH PF01738.18 AID31400.1 - 0.0051 16.4 0.0 0.0087 15.6 0.0 1.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Thioesterase PF00975.20 AID31400.1 - 0.04 14.0 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Lipase_3 PF01764.25 AID31400.1 - 0.093 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) TPR_2 PF07719.17 AID31401.1 - 4.8e-17 60.6 11.4 0.00042 20.2 0.1 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 AID31401.1 - 8.1e-17 60.3 1.0 2.6e-05 24.3 0.2 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID31401.1 - 3.8e-14 52.1 2.7 0.0014 18.3 0.2 4.3 1 1 3 4 4 4 3 TPR repeat TPR_16 PF13432.6 AID31401.1 - 8.5e-13 48.7 18.8 6.2e-05 23.6 5.0 3.9 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 AID31401.1 - 5e-11 43.0 8.2 8.2e-05 23.0 0.6 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 AID31401.1 - 5.1e-10 38.7 4.2 0.1 12.5 0.1 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 AID31401.1 - 5.5e-07 29.9 22.5 0.0007 20.2 0.8 5.0 2 1 3 5 5 4 4 Tetratricopeptide repeat TPR_6 PF13174.6 AID31401.1 - 1.8e-06 28.2 5.9 0.59 10.9 0.1 4.8 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 AID31401.1 - 1.1e-05 25.7 17.8 0.078 13.3 0.3 4.9 3 2 2 6 6 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID31401.1 - 1.1e-05 25.2 0.6 0.66 10.3 0.1 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 AID31401.1 - 0.00015 21.6 4.1 0.13 12.3 0.2 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 AID31401.1 - 0.0012 18.6 10.6 0.2 11.6 0.4 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 AID31401.1 - 0.047 13.8 13.7 0.13 12.4 2.6 3.1 1 1 3 4 4 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID31401.1 - 0.089 13.5 0.0 0.089 13.5 0.0 5.4 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_20 PF14561.6 AID31401.1 - 0.1 12.9 4.7 4.4 7.7 0.1 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat Ku PF02735.16 AID31402.1 - 2.3e-32 112.4 0.0 3e-32 112.0 0.0 1.1 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain LigD_N PF13298.6 AID31403.1 - 5e-39 132.8 0.0 9.7e-39 131.9 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) DNA_ligase_A_M PF01068.21 AID31403.1 - 1.5e-25 90.1 0.0 2.1e-25 89.6 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 AID31403.1 - 2.3e-16 60.2 0.0 5.2e-16 59.1 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 AID31403.1 - 1.4e-05 25.5 0.0 2.9e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 RNA ligase Phe_hydrox_dim PF07976.12 AID31404.1 - 0.088 12.8 0.0 0.091 12.8 0.0 1.0 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain AMPK1_CBM PF16561.5 AID31404.1 - 0.12 12.7 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Glycogen recognition site of AMP-activated protein kinase Flp_Fap PF04964.14 AID31405.1 - 3.6e-20 71.5 5.0 3.9e-20 71.4 5.0 1.0 1 0 0 1 1 1 1 Flp/Fap pilin component Flp1_like PF16982.5 AID31405.1 - 0.11 11.9 0.6 0.3 10.5 0.6 1.8 1 1 0 1 1 1 0 Putative Flagellin, Flp1-like, domain EthD PF07110.11 AID31406.1 - 3.2e-11 44.2 0.1 7.3e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 EthD domain MmlI PF09448.10 AID31406.1 - 4.1e-06 27.2 0.1 1.7e-05 25.2 0.1 1.8 1 1 0 1 1 1 1 Methylmuconolactone methyl-isomerase DUF1330 PF07045.11 AID31406.1 - 0.022 15.1 0.0 0.027 14.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) Acetyltransf_6 PF13480.7 AID31407.1 - 5.1e-22 78.6 0.1 1.4e-21 77.1 0.1 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AID31408.1 - 8.5e-26 90.8 0.6 2.7e-25 89.2 0.1 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Glycos_transf_1 PF00534.20 AID31410.1 - 1.4e-32 112.6 0.0 2e-32 112.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID31410.1 - 2.4e-24 86.3 0.1 4.4e-24 85.4 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID31410.1 - 0.00012 22.4 0.0 0.00025 21.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF1972 PF09314.11 AID31411.1 - 3.1e-15 56.3 0.0 1.8e-14 53.7 0.0 2.1 2 1 0 2 2 2 1 Domain of unknown function (DUF1972) Glycos_transf_1 PF00534.20 AID31411.1 - 4.4e-07 29.6 0.0 6.3e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID31411.1 - 5.2e-07 30.0 0.5 1e-06 29.0 0.5 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 AID31411.1 - 1.8e-05 25.2 6.9 4.2e-05 24.0 6.9 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 AID31411.1 - 6.2e-05 23.4 0.1 0.00011 22.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID31411.1 - 8.2e-05 22.7 2.5 8.2e-05 22.7 2.5 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Cellulase PF00150.18 AID31412.1 - 1.2e-17 64.3 0.0 2.3e-17 63.3 0.0 1.4 1 1 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Wzz PF02706.15 AID31414.1 - 5.3e-11 42.7 0.2 9.4e-10 38.7 0.1 2.8 2 0 0 2 2 2 1 Chain length determinant protein GNVR PF13807.6 AID31414.1 - 2.5e-09 36.9 0.0 9.6e-09 35.0 0.0 2.1 1 0 0 1 1 1 1 G-rich domain on putative tyrosine kinase Methyltransf_24 PF13578.6 AID31414.1 - 0.024 15.7 0.8 0.1 13.7 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain RGS PF00615.19 AID31414.1 - 0.07 13.4 1.7 0.48 10.7 0.3 2.2 2 0 0 2 2 2 0 Regulator of G protein signaling domain DUF2730 PF10805.8 AID31414.1 - 1.1 9.4 3.1 1.6 8.9 0.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) Nup54 PF13874.6 AID31414.1 - 1.3 9.1 13.8 9.6 6.3 13.7 2.2 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 CorA PF01544.18 AID31414.1 - 3.2 7.0 9.8 0.48 9.7 0.3 2.2 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Glyco_hydro_43 PF04616.14 AID31415.1 - 0.0082 15.5 0.0 0.02 14.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl hydrolases family 43 FAD_binding_3 PF01494.19 AID31416.1 - 1.1e-19 70.9 0.3 6.9e-11 42.0 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.14 AID31416.1 - 1.6e-07 30.9 0.6 0.00016 21.0 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID31416.1 - 2.8e-06 26.6 0.1 0.018 14.1 0.0 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_9 PF13454.6 AID31416.1 - 5.8e-05 23.1 0.1 0.063 13.3 0.0 2.6 2 0 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID31416.1 - 7.9e-05 22.8 0.2 0.00019 21.6 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID31416.1 - 8.5e-05 22.3 0.2 0.0029 17.2 0.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID31416.1 - 0.0013 18.6 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 AID31416.1 - 0.0016 17.6 0.3 0.029 13.5 0.3 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AID31416.1 - 0.0035 16.5 0.5 0.0053 15.9 0.5 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_Gly3P_dh_N PF01210.23 AID31416.1 - 0.0036 17.3 0.0 0.0058 16.6 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 AID31416.1 - 0.004 16.8 0.1 0.0068 16.1 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Thi4 PF01946.17 AID31416.1 - 0.0047 16.2 0.2 0.024 13.9 0.1 1.9 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 AID31416.1 - 0.012 14.4 0.2 0.036 12.8 0.1 1.8 3 0 0 3 3 3 0 HI0933-like protein Trp_halogenase PF04820.14 AID31416.1 - 0.016 14.1 1.5 1.4 7.7 0.4 2.3 1 1 1 2 2 2 0 Tryptophan halogenase TrkA_N PF02254.18 AID31416.1 - 0.028 14.7 0.1 0.11 12.7 0.0 2.0 2 1 0 2 2 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 AID31416.1 - 0.03 13.7 0.0 0.054 12.8 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 AID31416.1 - 0.046 13.3 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 AID31416.1 - 0.076 12.3 0.8 0.11 11.8 0.8 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_2 PF03446.15 AID31416.1 - 0.081 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 AID31416.1 - 0.36 10.9 1.1 3.1 7.9 0.1 2.6 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase AP_endonuc_2 PF01261.24 AID31417.1 - 8.3e-19 67.9 0.1 1.6e-18 66.9 0.0 1.5 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Peripla_BP_3 PF13377.6 AID31418.1 - 1.4e-22 80.8 1.0 2.1e-22 80.2 0.1 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID31418.1 - 9.2e-14 51.5 0.0 1.3e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID31418.1 - 1.8e-13 50.0 0.6 4.6e-13 48.7 0.6 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID31418.1 - 1.7e-08 34.4 0.0 4.5e-08 33.0 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein domain HTH_31 PF13560.6 AID31418.1 - 0.00068 19.9 0.1 0.0023 18.2 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID31418.1 - 0.0015 18.6 0.0 0.0039 17.2 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix DUF3459 PF11941.8 AID31418.1 - 0.048 14.0 0.3 0.19 12.0 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3459) HTH_10 PF04967.12 AID31418.1 - 0.073 12.9 0.0 0.22 11.3 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_6 PF01418.17 AID31418.1 - 0.12 12.3 0.4 0.31 11.1 0.4 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_AsnC-type PF13404.6 AID31418.1 - 0.14 12.0 1.0 0.4 10.6 0.2 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain TetR_N PF00440.23 AID31418.1 - 0.32 10.8 1.4 0.93 9.3 0.3 2.4 3 0 0 3 3 3 0 Bacterial regulatory proteins, tetR family 2-Hacid_dh_C PF02826.19 AID31419.1 - 6.5e-37 126.6 0.0 1.3e-36 125.6 0.0 1.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID31419.1 - 0.0033 17.1 0.0 0.0041 16.8 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CsbD PF05532.12 AID31420.1 - 2.5e-18 65.7 14.2 3.1e-18 65.4 14.2 1.1 1 0 0 1 1 1 1 CsbD-like MT0933_antitox PF14013.6 AID31420.1 - 0.0011 19.2 14.8 0.19 12.0 0.6 2.0 2 0 0 2 2 2 2 MT0933-like antitoxin protein DUF883 PF05957.13 AID31420.1 - 0.028 15.0 2.0 0.034 14.7 2.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Activator-TraM PF11657.8 AID31420.1 - 0.05 13.4 2.3 0.058 13.2 2.3 1.0 1 0 0 1 1 1 0 Transcriptional activator TraM Alanine_zipper PF11839.8 AID31420.1 - 0.58 10.6 12.3 48 4.4 12.3 2.1 1 1 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein Catalase PF00199.19 AID31421.1 - 1.9e-174 580.3 0.2 2.3e-174 580.0 0.2 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 AID31421.1 - 2.1e-18 66.3 0.0 4.6e-18 65.2 0.0 1.6 1 0 0 1 1 1 1 Catalase-related immune-responsive Catalase_C PF18011.1 AID31421.1 - 1.3e-14 54.2 0.0 1.9e-14 53.6 0.0 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases RHH_1 PF01402.21 AID31423.1 - 0.047 13.6 2.0 0.15 12.0 0.4 2.2 2 1 0 2 2 2 0 Ribbon-helix-helix protein, copG family ABATE PF07336.11 AID31423.1 - 0.069 13.8 2.4 0.072 13.8 2.4 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator Iron_permease PF04120.12 AID31424.1 - 1.1e-08 34.9 0.0 1.4e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Low affinity iron permease TrbC PF04956.13 AID31424.1 - 0.065 13.5 3.4 0.81 9.9 3.7 2.0 1 1 1 2 2 2 0 TrbC/VIRB2 family TraQ PF09679.10 AID31424.1 - 0.072 13.0 1.1 0.14 12.1 1.1 1.4 1 1 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) UNC-79 PF14776.6 AID31424.1 - 0.12 11.1 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 FeoB_C PF07664.12 AID31424.1 - 3.8 7.3 5.0 11 5.8 0.4 2.2 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus DUF4083 PF13314.6 AID31424.1 - 6.9 6.7 8.3 8.8 6.4 5.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4083) SRAP PF02586.14 AID31426.1 - 1.7e-18 67.0 0.0 2e-18 66.7 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) HTH_31 PF13560.6 AID31428.1 - 0.0021 18.4 0.1 0.0067 16.8 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 AID31428.1 - 0.04 14.4 0.0 0.1 13.1 0.0 1.7 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain FCD PF07729.12 AID31429.1 - 1.7e-20 73.7 3.7 2.5e-20 73.1 3.7 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID31429.1 - 3.6e-14 52.2 0.2 3.6e-14 52.2 0.2 2.1 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family Ribosomal_S19e PF01090.19 AID31429.1 - 0.0039 16.9 0.1 0.009 15.7 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein S19e Rrf2 PF02082.20 AID31429.1 - 0.024 14.9 0.2 0.27 11.6 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator HTH_54 PF18607.1 AID31429.1 - 0.12 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 ParA helix turn helix domain PaaX PF07848.12 AID31429.1 - 0.13 12.5 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 PaaX-like protein DAO PF01266.24 AID31430.1 - 8.5e-63 213.1 1.5 1e-62 212.8 1.5 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID31430.1 - 5.2e-06 25.9 0.2 0.0055 16.0 0.2 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID31430.1 - 9.4e-06 25.7 0.3 0.025 14.6 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding HI0933_like PF03486.14 AID31430.1 - 1.4e-05 24.0 0.7 0.038 12.7 1.0 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 AID31430.1 - 2.2e-05 23.8 1.9 0.00077 18.6 0.7 2.2 2 0 0 2 2 2 1 FAD binding domain UDPG_MGDP_dh_N PF03721.14 AID31430.1 - 4.3e-05 23.2 1.6 0.00015 21.4 0.1 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 AID31430.1 - 8.8e-05 21.7 0.4 0.018 14.2 0.9 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 AID31430.1 - 0.00014 22.0 0.3 0.00055 20.1 0.5 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 AID31430.1 - 0.00096 18.3 0.6 0.12 11.4 0.5 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein 3HCDH_N PF02737.18 AID31430.1 - 0.0035 17.3 0.4 0.0055 16.6 0.4 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 AID31430.1 - 0.0051 16.1 0.1 2.5 7.3 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 AID31430.1 - 0.017 14.8 0.3 0.027 14.1 0.3 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 AID31430.1 - 0.089 13.1 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain F420_oxidored PF03807.17 AID31430.1 - 0.094 13.3 0.3 0.28 11.8 0.3 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 AID31430.1 - 0.098 11.9 0.4 0.17 11.2 0.4 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 AID31430.1 - 0.1 11.8 2.0 0.11 11.7 1.1 1.4 2 0 0 2 2 2 0 FAD binding domain FAD_oxidored PF12831.7 AID31430.1 - 0.15 11.4 1.0 0.21 10.9 1.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID31430.1 - 0.15 12.6 0.3 0.43 11.2 0.3 1.7 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase Aminotran_1_2 PF00155.21 AID31431.1 - 4.9e-26 91.8 0.0 6.3e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID31431.1 - 5.8e-18 64.3 1.1 2.1e-17 62.5 1.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 AID31431.1 - 7.8e-07 28.9 0.8 3.3e-06 26.9 0.8 2.1 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID31431.1 - 1.3e-06 28.3 0.5 3.8e-06 26.8 0.5 1.8 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 AID31431.1 - 5.8e-06 26.0 0.2 2.7e-05 23.9 0.2 2.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 AID31431.1 - 4.1e-05 23.4 0.0 0.00017 21.5 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID31431.1 - 6.3e-05 22.5 0.0 0.00019 20.9 0.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 AID31431.1 - 0.00095 19.5 0.1 0.0027 18.0 0.1 1.8 1 0 0 1 1 1 1 Transcriptional regulator HTH_36 PF13730.6 AID31431.1 - 0.0012 18.7 0.0 0.0029 17.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID31431.1 - 0.0015 18.2 0.1 0.0079 16.0 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 AID31431.1 - 0.0022 18.1 0.2 0.0022 18.1 0.2 2.7 4 0 0 4 4 1 1 Helix-turn-helix domain HTH_27 PF13463.6 AID31431.1 - 0.0028 18.1 0.3 0.056 14.0 0.0 3.0 3 0 0 3 3 3 1 Winged helix DNA-binding domain HTH_29 PF13551.6 AID31431.1 - 0.0029 17.6 0.2 0.03 14.3 0.1 2.6 3 1 0 3 3 2 1 Winged helix-turn helix Crp PF00325.20 AID31431.1 - 0.0033 17.0 0.5 0.0033 17.0 0.5 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family HTH_11 PF08279.12 AID31431.1 - 0.0047 16.8 0.1 0.011 15.6 0.1 1.6 1 0 0 1 1 1 1 HTH domain LexA_DNA_bind PF01726.16 AID31431.1 - 0.0048 16.7 0.1 0.013 15.3 0.1 1.7 1 0 0 1 1 1 1 LexA DNA binding domain TrmB PF01978.19 AID31431.1 - 0.0048 16.8 0.0 0.031 14.2 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Aminotran_MocR PF12897.7 AID31431.1 - 0.0085 14.9 0.1 0.031 13.1 0.0 1.8 2 0 0 2 2 2 1 Alanine-glyoxylate amino-transferase Fe_dep_repress PF01325.19 AID31431.1 - 0.016 15.4 0.0 0.033 14.4 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Aminotran_3 PF00202.21 AID31431.1 - 0.038 12.7 0.0 0.059 12.0 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-III HTH_5 PF01022.20 AID31431.1 - 0.046 13.6 0.0 0.77 9.7 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_38 PF13936.6 AID31431.1 - 0.09 12.5 0.7 0.22 11.3 0.1 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain Trp_repressor PF01371.19 AID31431.1 - 0.11 12.7 0.2 0.43 10.7 0.0 2.1 2 0 0 2 2 1 0 Trp repressor protein HTH_Tnp_ISL3 PF13542.6 AID31431.1 - 0.12 11.8 0.1 0.12 11.8 0.1 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 ABC_tran PF00005.27 AID31432.1 - 7.2e-34 117.2 0.0 1.3e-33 116.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID31432.1 - 1.4e-17 63.6 0.3 7.4e-17 61.3 0.1 2.4 2 0 0 2 2 2 1 TOBE domain TOBE PF03459.17 AID31432.1 - 1.3e-05 25.4 1.1 0.00035 20.8 0.1 2.7 2 0 0 2 2 2 1 TOBE domain AAA_16 PF13191.6 AID31432.1 - 0.0021 18.5 0.0 0.004 17.5 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 AID31432.1 - 0.0025 17.7 0.2 1.9 8.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31432.1 - 0.0046 16.4 0.1 0.17 11.3 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID31432.1 - 0.0093 16.2 0.1 0.016 15.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID31432.1 - 0.04 13.8 0.2 0.081 12.8 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase T2SSE PF00437.20 AID31432.1 - 0.12 11.4 0.1 0.21 10.6 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.6 AID31432.1 - 0.12 12.1 0.1 0.28 11.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 AID31432.1 - 0.14 11.7 0.4 9.2 5.8 0.0 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_28 PF13521.6 AID31432.1 - 0.27 11.5 0.5 0.59 10.3 0.5 1.5 1 0 0 1 1 1 0 AAA domain SBP_bac_8 PF13416.6 AID31433.1 - 1.4e-39 136.6 5.4 1.7e-39 136.3 5.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31433.1 - 2.2e-08 34.5 7.3 4.4e-08 33.5 7.3 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID31434.1 - 9.9e-10 38.4 27.0 9.9e-10 38.4 27.0 2.4 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID31435.1 - 7.3e-15 55.2 20.2 7.3e-15 55.2 20.2 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5560 PF17715.1 AID31436.1 - 0.00043 19.8 0.0 0.00052 19.5 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5560) DUF1289 PF06945.13 AID31436.1 - 0.02 14.7 0.1 0.036 13.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DUF2306 PF10067.9 AID31437.1 - 7.1e-18 65.2 12.9 9.7e-18 64.8 12.9 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2306) DUF420 PF04238.12 AID31437.1 - 8.1e-05 22.9 9.2 0.031 14.5 0.8 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF420) CPP1-like PF11833.8 AID31437.1 - 4.9 6.7 7.3 1.1 8.9 3.5 1.8 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Acyl_transf_3 PF01757.22 AID31439.1 - 3.6e-24 85.5 33.3 5.1e-24 85.0 33.3 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF1418 PF07214.12 AID31439.1 - 0.11 12.4 0.2 0.37 10.7 0.2 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) DUF1376 PF07120.11 AID31443.1 - 1.3e-24 86.3 0.0 2.1e-24 85.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1376) DUF982 PF06169.12 AID31444.1 - 5.2e-12 45.6 0.2 7.9e-12 45.0 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF982) DUF982 PF06169.12 AID31445.1 - 6.6e-19 67.7 0.0 8.3e-19 67.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF982) GcrA PF07750.11 AID31447.1 - 4.2e-09 37.0 6.4 1.5e-06 28.7 1.4 2.2 2 0 0 2 2 2 2 GcrA cell cycle regulator HTH_38 PF13936.6 AID31447.1 - 0.017 14.8 0.1 0.039 13.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Peptidase_S24 PF00717.23 AID31448.1 - 6.9e-10 38.8 0.0 1.3e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase S24-like HTH_31 PF13560.6 AID31448.1 - 7.5e-06 26.2 0.1 1.3e-05 25.4 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 AID31448.1 - 8.4e-06 25.7 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID31448.1 - 0.00023 21.1 0.0 0.00039 20.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix BPD_transp_2 PF02653.16 AID31456.1 - 2.2e-55 187.7 45.2 2.2e-55 187.7 45.2 1.6 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID31457.1 - 2.1e-53 180.5 0.0 1.4e-31 109.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID31457.1 - 1.6e-07 31.5 1.3 0.0031 17.4 0.1 3.2 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID31457.1 - 0.00025 20.7 0.4 0.0008 19.1 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF2813 PF11398.8 AID31457.1 - 0.00069 19.0 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) SMC_N PF02463.19 AID31457.1 - 0.012 15.0 1.3 5.7 6.3 0.0 3.1 4 0 0 4 4 4 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID31457.1 - 0.03 14.8 0.0 0.059 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID31457.1 - 0.054 13.9 0.6 2.6 8.4 0.2 2.9 2 1 0 2 2 2 0 AAA ATPase domain Zeta_toxin PF06414.12 AID31457.1 - 0.097 11.9 0.4 1.1 8.6 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 AID31457.1 - 0.13 12.5 2.7 12 6.2 0.1 3.6 4 0 0 4 4 4 0 AAA domain RsgA_GTPase PF03193.16 AID31457.1 - 0.14 12.0 0.5 0.5 10.3 0.1 2.1 3 0 0 3 3 3 0 RsgA GTPase NB-ARC PF00931.22 AID31457.1 - 0.16 11.1 0.9 7 5.7 0.1 2.8 2 1 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 AID31457.1 - 0.16 11.6 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Peripla_BP_4 PF13407.6 AID31458.1 - 1.7e-54 185.1 10.0 2e-54 184.9 10.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 AID31458.1 - 1.9e-13 51.1 0.1 6.8e-13 49.3 0.0 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID31458.1 - 1.8e-11 44.0 0.9 2.4e-11 43.6 0.9 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family RibD_C PF01872.17 AID31459.1 - 1.6e-17 64.1 0.0 1.9e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain Epimerase PF01370.21 AID31460.1 - 8.5e-16 58.1 0.3 6.4e-15 55.3 0.3 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID31460.1 - 7.2e-14 52.1 0.2 1.1e-13 51.5 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 AID31460.1 - 1.2e-08 34.7 0.0 2.8e-06 27.0 0.0 2.3 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase NmrA PF05368.13 AID31460.1 - 4.5e-08 32.9 0.3 6.6e-08 32.4 0.3 1.2 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 AID31460.1 - 2e-06 27.1 0.1 6.1e-05 22.3 0.1 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID31460.1 - 1.2e-05 24.4 0.0 1.7e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Sacchrp_dh_NADP PF03435.18 AID31460.1 - 1.6e-05 25.2 0.0 3e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 AID31460.1 - 9e-05 22.7 0.2 0.00024 21.3 0.1 1.7 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_4 PF07993.12 AID31460.1 - 0.00031 20.0 0.1 0.00075 18.7 0.0 1.6 2 1 0 2 2 2 1 Male sterility protein F420_oxidored PF03807.17 AID31460.1 - 0.00096 19.7 0.1 0.0031 18.1 0.1 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 AID31460.1 - 0.0045 16.5 0.2 0.0073 15.8 0.2 1.4 1 0 0 1 1 1 1 short chain dehydrogenase ApbA PF02558.16 AID31460.1 - 0.0087 15.7 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 AID31460.1 - 0.03 14.5 0.0 0.056 13.6 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Glyco_trans_4_4 PF13579.6 AID31460.1 - 0.14 12.6 4.6 0.81 10.1 4.6 2.3 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain MLTR_LBD PF17765.1 AID31461.1 - 1.4e-46 158.7 1.0 1.9e-46 158.3 1.0 1.2 1 0 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain HTH_31 PF13560.6 AID31461.1 - 5.6e-18 65.0 2.3 5.6e-18 65.0 2.3 2.4 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_3 PF01381.22 AID31461.1 - 0.001 19.1 0.0 0.0021 18.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID31461.1 - 0.15 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain AHSA1 PF08327.11 AID31462.1 - 8.8e-17 61.5 0.0 9.9e-17 61.3 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID31462.1 - 1.1e-07 32.2 0.0 1.4e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport TPMT PF05724.11 AID31463.1 - 0.0023 17.6 0.0 0.0024 17.5 0.0 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_23 PF13489.6 AID31463.1 - 0.17 11.7 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MFS_1 PF07690.16 AID31464.1 - 1.8e-18 66.6 83.8 1.1e-14 54.2 54.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DAO PF01266.24 AID31465.1 - 2.1e-07 30.9 6.4 4.8e-05 23.1 6.4 3.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID31465.1 - 5.3e-06 25.9 0.0 0.00013 21.3 0.0 2.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID31465.1 - 0.00012 22.3 0.1 0.00028 21.1 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID31465.1 - 0.00053 19.3 0.2 0.0071 15.6 0.2 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID31465.1 - 0.0024 16.7 0.2 0.0033 16.2 0.2 1.2 1 0 0 1 1 1 1 HI0933-like protein Amino_oxidase PF01593.24 AID31465.1 - 0.01 15.2 0.9 0.19 11.0 0.3 2.2 1 1 1 2 2 2 0 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 AID31465.1 - 0.019 14.3 0.5 0.028 13.6 0.5 1.2 1 0 0 1 1 1 0 FAD binding domain 3HCDH_N PF02737.18 AID31465.1 - 0.037 13.9 0.2 0.072 13.0 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 AID31465.1 - 0.066 12.3 1.0 0.098 11.7 1.0 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A UBA_4 PF14555.6 AID31465.1 - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 UBA-like domain FAD_binding_2 PF00890.24 AID31465.1 - 0.1 11.6 4.2 0.47 9.5 1.7 2.1 1 1 1 2 2 2 0 FAD binding domain NAD_binding_9 PF13454.6 AID31465.1 - 0.11 12.5 1.6 0.4 10.7 0.5 2.3 2 0 0 2 2 2 0 FAD-NAD(P)-binding Thi4 PF01946.17 AID31465.1 - 0.11 11.8 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Thi4 family Lycopene_cycl PF05834.12 AID31465.1 - 0.22 10.5 4.6 0.13 11.3 0.2 2.3 3 0 0 3 3 3 0 Lycopene cyclase protein HTH_20 PF12840.7 AID31466.1 - 2.6e-11 43.4 0.4 3.8e-11 42.9 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31466.1 - 3.3e-05 23.7 0.1 5.3e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID31466.1 - 0.015 15.2 0.2 0.024 14.5 0.2 1.5 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 AID31466.1 - 0.041 13.7 0.6 0.071 12.9 0.6 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_24 PF13412.6 AID31466.1 - 0.048 13.2 0.0 0.069 12.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID31466.1 - 0.082 12.8 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 MarR family RP-C PF03428.13 AID31466.1 - 0.093 12.4 0.1 0.19 11.4 0.1 1.5 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF4032 PF13224.6 AID31466.1 - 0.15 11.9 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4032) TrmB PF01978.19 AID31466.1 - 0.19 11.6 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB ArsC PF03960.15 AID31467.1 - 6.2e-19 67.8 0.0 1.4e-18 66.7 0.0 1.6 1 1 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 AID31467.1 - 0.0086 16.3 0.0 0.055 13.7 0.0 2.0 1 1 1 2 2 2 1 Glutaredoxin MIP PF00230.20 AID31468.1 - 4.5e-22 78.9 14.3 3e-19 69.6 6.0 2.0 1 1 1 2 2 2 2 Major intrinsic protein HTH_20 PF12840.7 AID31469.1 - 9.2e-16 57.7 2.3 9.6e-16 57.6 0.9 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31469.1 - 3.9e-05 23.4 0.0 6.7e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID31469.1 - 0.0011 18.8 0.3 0.0021 17.9 0.3 1.5 1 1 0 1 1 1 1 MarR family Rrf2 PF02082.20 AID31469.1 - 0.0023 18.2 0.0 0.004 17.5 0.0 1.4 1 1 0 1 1 1 1 Transcriptional regulator Penicillinase_R PF03965.16 AID31469.1 - 0.0039 17.5 0.0 0.0046 17.3 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.6 AID31469.1 - 0.0056 16.2 0.0 0.017 14.7 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID31469.1 - 0.014 15.4 0.3 0.018 15.0 0.3 1.4 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 AID31469.1 - 0.017 15.0 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_34 PF13601.6 AID31469.1 - 0.023 14.9 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.19 AID31469.1 - 0.043 13.7 0.0 0.067 13.1 0.0 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 AID31469.1 - 0.055 14.0 0.0 0.081 13.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Chitin_bind_4 PF00379.23 AID31469.1 - 0.07 13.7 0.0 0.091 13.3 0.0 1.2 1 0 0 1 1 1 0 Insect cuticle protein GGDEF PF00990.21 AID31470.1 - 1.4e-42 145.2 0.0 2.9e-42 144.2 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_4 PF08448.10 AID31470.1 - 3.2e-28 98.2 0.4 9.8e-23 80.5 0.1 2.7 2 0 0 2 2 2 2 PAS fold PAS_7 PF12860.7 AID31470.1 - 5.3e-23 81.4 0.0 5.2e-21 75.0 0.0 2.9 2 1 0 2 2 2 1 PAS fold 5TM-5TMR_LYT PF07694.12 AID31470.1 - 3e-17 62.6 17.4 5.1e-17 61.9 17.4 1.3 1 0 0 1 1 1 1 5TMR of 5TMR-LYT PAS PF00989.25 AID31470.1 - 3.2e-10 40.0 0.0 1.9e-07 31.1 0.0 3.2 2 1 0 2 2 2 1 PAS fold PAS_9 PF13426.7 AID31470.1 - 4.5e-08 33.3 0.0 1.3e-06 28.6 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.7 AID31470.1 - 1.2e-07 31.6 0.0 0.011 15.8 0.0 2.8 2 0 0 2 2 2 2 PAS domain Folate_carrier PF01770.18 AID31470.1 - 0.12 11.0 0.1 0.19 10.5 0.1 1.1 1 0 0 1 1 1 0 Reduced folate carrier LysR_substrate PF03466.20 AID31471.1 - 1.2e-29 103.1 3.7 1.2e-29 103.1 3.7 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID31471.1 - 7.5e-17 61.0 2.0 1.5e-16 60.1 2.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Aldo_ket_red PF00248.21 AID31472.1 - 2.4e-47 161.5 0.0 1.9e-45 155.4 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family MarR_2 PF12802.7 AID31472.1 - 0.069 13.0 0.1 2.3 8.2 0.1 2.7 2 0 0 2 2 2 0 MarR family RsdA_SigD_bd PF16751.5 AID31472.1 - 0.41 11.0 4.0 0.33 11.2 1.4 2.2 3 0 0 3 3 3 0 Anti-sigma-D factor RsdA to sigma factor binding region HTH_5 PF01022.20 AID31473.1 - 1.2e-13 50.7 0.9 1.7e-13 50.2 0.9 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID31473.1 - 5.9e-10 39.1 1.5 1e-09 38.3 1.2 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID31473.1 - 1.1e-06 28.4 0.5 2.2e-06 27.4 0.3 1.7 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID31473.1 - 2.5e-05 23.8 0.2 5.3e-05 22.7 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.17 AID31473.1 - 4.7e-05 23.2 0.5 7.6e-05 22.5 0.5 1.4 1 1 0 1 1 1 1 TFIIE alpha subunit HxlR PF01638.17 AID31473.1 - 6.2e-05 22.8 0.2 7.8e-05 22.5 0.2 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_Crp_2 PF13545.6 AID31473.1 - 9.4e-05 22.3 0.7 0.00016 21.5 0.5 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 AID31473.1 - 0.00037 20.8 0.4 0.0006 20.1 0.4 1.6 1 1 0 1 1 1 1 Transcriptional regulator HTH_1 PF00126.27 AID31473.1 - 0.0016 18.3 0.0 0.0029 17.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID31473.1 - 0.0026 17.9 0.1 0.0071 16.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID31473.1 - 0.0071 16.1 1.3 0.024 14.4 0.6 2.2 2 1 0 2 2 2 1 IclR helix-turn-helix domain HTH_47 PF16221.5 AID31473.1 - 0.0087 15.6 0.5 0.016 14.8 0.5 1.5 1 0 0 1 1 1 1 winged helix-turn-helix HTH_27 PF13463.6 AID31473.1 - 0.011 16.3 0.2 0.018 15.6 0.2 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_AsnC-type PF13404.6 AID31473.1 - 0.022 14.6 0.0 0.064 13.1 0.0 1.9 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HrcA_DNA-bdg PF03444.15 AID31473.1 - 0.031 13.9 0.1 0.096 12.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TrmB PF01978.19 AID31473.1 - 0.032 14.1 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 AID31473.1 - 0.034 14.3 0.1 0.052 13.7 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 AID31473.1 - 0.049 13.6 0.1 0.11 12.5 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_AraC PF00165.23 AID31473.1 - 0.053 13.6 0.0 0.098 12.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Pyr_redox_2 PF07992.14 AID31474.1 - 5.9e-14 52.0 0.0 1.8e-13 50.4 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID31474.1 - 0.035 14.7 0.3 3.8 8.1 0.2 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF2892 PF11127.8 AID31475.1 - 2.6e-14 53.0 4.4 2.9e-14 52.8 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) DUF4436 PF14494.6 AID31475.1 - 0.38 10.0 3.8 0.39 10.0 3.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4436) HlyD_3 PF13437.6 AID31476.1 - 8e-15 55.5 6.0 2.6e-08 34.5 0.2 2.7 2 1 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID31476.1 - 9.9e-15 54.3 2.1 6.2e-14 51.7 2.1 2.0 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID31476.1 - 1.1e-07 31.6 16.3 3e-06 27.0 4.9 3.6 4 1 0 4 4 4 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID31476.1 - 1.1e-05 25.2 4.3 0.0012 18.6 0.1 3.1 3 0 0 3 3 3 2 Biotin-requiring enzyme HlyD_2 PF12700.7 AID31476.1 - 1.5e-05 24.0 0.0 0.018 13.8 0.0 2.1 2 0 0 2 2 2 2 HlyD family secretion protein PTS_EIIA_1 PF00358.20 AID31476.1 - 0.005 16.6 0.2 1.9 8.3 0.0 2.6 2 0 0 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Peptidase_M23 PF01551.22 AID31476.1 - 0.0084 16.3 1.3 0.6 10.4 0.0 3.1 2 1 0 2 2 2 1 Peptidase family M23 DUF2046 PF09755.9 AID31476.1 - 0.12 11.6 0.4 0.18 11.0 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) Seryl_tRNA_N PF02403.22 AID31476.1 - 0.23 11.7 1.9 0.38 11.0 1.9 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4140 PF13600.6 AID31476.1 - 0.4 11.1 8.3 0.75 10.3 1.0 2.5 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) OEP PF02321.18 AID31476.1 - 0.81 9.5 9.9 1.3 8.8 9.9 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein NPV_P10 PF05531.12 AID31476.1 - 0.95 10.0 5.4 0.26 11.8 2.1 1.7 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Acyl-CoA_dh_2 PF08028.11 AID31476.1 - 1.6 9.0 10.7 1.1 9.5 3.7 2.8 2 1 1 3 3 3 0 Acyl-CoA dehydrogenase, C-terminal domain FlxA PF14282.6 AID31476.1 - 4.1 7.4 6.9 11 6.1 6.9 1.6 1 1 0 1 1 1 0 FlxA-like protein ACR_tran PF00873.19 AID31477.1 - 3.5e-99 332.9 2.5 4.4e-99 332.6 2.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID31477.1 - 4.6e-05 22.9 8.8 0.0001 21.8 8.8 1.5 1 0 0 1 1 1 1 Protein export membrane protein MMPL PF03176.15 AID31477.1 - 0.00022 20.3 16.2 0.00022 20.3 16.2 2.1 2 0 0 2 2 2 1 MMPL family Patched PF02460.18 AID31477.1 - 1.9 6.5 10.5 2.7 6.0 10.5 1.1 1 0 0 1 1 1 0 Patched family ACR_tran PF00873.19 AID31478.1 - 1.3e-29 102.6 16.3 1.5e-29 102.3 16.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID31478.1 - 3.6e-05 23.3 5.4 4.2e-05 23.0 5.4 1.0 1 0 0 1 1 1 1 Protein export membrane protein ACR_tran PF00873.19 AID31480.1 - 0.02 12.6 0.2 0.023 12.3 0.2 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1269 PF06897.12 AID31480.1 - 0.53 10.6 5.0 9.5 6.6 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) HTH_20 PF12840.7 AID31481.1 - 9.7e-15 54.4 1.4 1.5e-14 53.8 1.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31481.1 - 3.9e-08 33.0 0.0 5.9e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID31481.1 - 5e-06 26.3 1.8 7.3e-06 25.8 1.8 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID31481.1 - 3.1e-05 23.4 0.0 5.9e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 AID31481.1 - 0.00014 21.9 3.5 0.00025 21.1 0.2 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 AID31481.1 - 0.00095 19.1 0.0 0.0015 18.5 0.0 1.4 1 1 0 1 1 1 1 HTH domain DprA_WH PF17782.1 AID31481.1 - 0.001 19.1 1.2 0.0016 18.5 1.2 1.3 1 0 0 1 1 1 1 DprA winged helix domain MarR PF01047.22 AID31481.1 - 0.0022 17.9 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 AID31481.1 - 0.014 15.1 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_34 PF13601.6 AID31481.1 - 0.027 14.6 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF742 PF05331.11 AID31481.1 - 0.03 14.2 0.3 0.037 13.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF742) Rrf2 PF02082.20 AID31481.1 - 0.055 13.8 0.1 0.08 13.3 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator LexA_DNA_bind PF01726.16 AID31481.1 - 0.11 12.2 0.8 0.78 9.6 0.1 2.3 2 1 1 3 3 3 0 LexA DNA binding domain AHSA1 PF08327.11 AID31482.1 - 1.4e-27 96.4 0.0 1.6e-27 96.2 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID31482.1 - 1.2e-05 25.6 0.2 1.7e-05 25.1 0.2 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Abhydrolase_6 PF12697.7 AID31483.1 - 3.5e-15 57.2 5.9 4.7e-15 56.8 5.9 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID31483.1 - 8.9e-08 32.1 0.1 1.3e-06 28.3 0.1 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID31483.1 - 7.4e-06 25.4 0.0 5.6e-05 22.5 0.0 1.9 2 0 0 2 2 2 1 Serine aminopeptidase, S33 NAD_binding_10 PF13460.6 AID31483.1 - 0.0076 16.2 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Peptidase_S15 PF02129.18 AID31483.1 - 0.02 14.5 0.2 0.053 13.1 0.2 1.6 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Glyoxalase PF00903.25 AID31484.1 - 3.9e-13 49.7 0.0 4.4e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID31484.1 - 0.00019 21.7 0.0 0.00026 21.2 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID31484.1 - 0.00099 19.9 0.2 0.0013 19.5 0.2 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 AID31484.1 - 0.014 15.6 1.0 4.7 7.3 0.1 2.7 1 1 1 2 2 2 0 Glyoxalase-like domain VIT1 PF01988.19 AID31485.1 - 1.2e-07 31.8 0.2 1.3e-07 31.7 0.2 1.0 1 0 0 1 1 1 1 VIT family PapA_C PF16911.5 AID31485.1 - 0.082 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus OsmC PF02566.19 AID31486.1 - 2.5e-06 27.9 0.0 2.6e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 OsmC-like protein VIT1 PF01988.19 AID31487.1 - 6.6e-50 169.9 25.5 5.9e-49 166.9 25.5 1.9 1 1 0 1 1 1 1 VIT family PseudoU_synth_2 PF00849.22 AID31488.1 - 1.9e-18 67.0 0.0 3.9e-18 66.0 0.0 1.5 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 AID31488.1 - 1e-10 41.2 1.3 2.6e-10 39.9 0.9 2.0 2 0 0 2 2 2 1 S4 domain ABM PF03992.16 AID31489.1 - 0.0035 17.4 0.0 0.0042 17.2 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase YDG PF18657.1 AID31489.1 - 0.04 14.1 0.6 0.048 13.9 0.6 1.1 1 0 0 1 1 1 0 YDG domain adh_short PF00106.25 AID31490.1 - 5.9e-18 65.0 0.0 8.6e-18 64.5 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31490.1 - 1.6e-14 54.0 0.2 2.6e-14 53.4 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 AID31490.1 - 1.6e-07 31.0 0.0 2e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID31490.1 - 6.2e-07 29.5 0.2 8.9e-07 29.0 0.2 1.3 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 AID31490.1 - 1.6e-05 24.9 0.2 2.8e-05 24.1 0.2 1.3 1 0 0 1 1 1 1 KR domain NmrA PF05368.13 AID31490.1 - 0.0011 18.6 0.1 0.0016 18.0 0.1 1.2 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 AID31490.1 - 0.011 14.9 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 RmlD substrate binding domain THF_DHG_CYH_C PF02882.19 AID31490.1 - 0.012 14.9 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_7 PF13241.6 AID31490.1 - 0.067 13.6 0.1 0.12 12.9 0.1 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 AID31490.1 - 0.069 13.4 0.1 0.12 12.7 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain ACP_syn_III_C PF08541.10 AID31490.1 - 0.076 13.2 0.0 0.31 11.3 0.0 2.0 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Sigma70_r2 PF04542.14 AID31491.1 - 5.5e-21 74.1 0.1 1.3e-20 72.9 0.1 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 SnoaL_2 PF12680.7 AID31491.1 - 7e-11 42.7 1.1 3.1e-10 40.6 0.7 2.3 2 0 0 2 2 2 1 SnoaL-like domain Sigma70_r4_2 PF08281.12 AID31491.1 - 3.9e-08 32.8 0.0 7.9e-08 31.9 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL PF07366.12 AID31491.1 - 0.0049 16.7 0.0 0.013 15.3 0.0 1.7 2 0 0 2 2 2 1 SnoaL-like polyketide cyclase NTF2 PF02136.20 AID31491.1 - 0.0074 16.8 0.0 0.013 16.1 0.0 1.3 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_3 PF13474.6 AID31491.1 - 0.0082 16.4 0.1 0.02 15.2 0.1 1.7 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 AID31491.1 - 0.0089 16.2 0.1 0.018 15.2 0.1 1.5 1 0 0 1 1 1 1 SnoaL-like domain Sigma70_r4 PF04545.16 AID31491.1 - 0.024 14.1 0.0 0.099 12.2 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 Glyoxalase PF00903.25 AID31492.1 - 5.2e-08 33.1 0.0 1e-07 32.2 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID31492.1 - 9.5e-07 28.8 0.0 1.3e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID31492.1 - 4.2e-06 27.5 0.0 6.2e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain His_Phos_1 PF00300.22 AID31493.1 - 1.2e-45 155.6 0.0 1.3e-45 155.4 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) EccE PF11203.8 AID31493.1 - 0.012 16.0 0.3 1.6 9.1 0.0 2.3 1 1 1 2 2 2 0 Putative type VII ESX secretion system translocon, EccE Porin_OmpG_1_2 PF16946.5 AID31493.1 - 0.11 11.7 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 OMPG-porin 1 family Phosphodiest PF01663.22 AID31495.1 - 1.3e-55 189.5 0.0 1.6e-55 189.2 0.0 1.0 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 AID31495.1 - 2.1e-08 33.9 0.0 1.3e-06 28.1 0.0 2.5 2 1 0 2 2 2 2 Sulfatase DUF535 PF04393.13 AID31496.1 - 5.2e-65 219.5 0.0 5.8e-65 219.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) Na_H_Exchanger PF00999.21 AID31496.1 - 0.1 11.4 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family Adeno_E1B_55K PF01696.17 AID31496.1 - 0.22 10.2 0.0 0.29 9.8 0.0 1.1 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen Usp PF00582.26 AID31497.1 - 3.2e-30 105.5 0.5 3.8e-30 105.2 0.5 1.1 1 0 0 1 1 1 1 Universal stress protein family Hexapep PF00132.24 AID31498.1 - 4.6e-15 54.7 6.5 5.4e-09 35.4 4.8 3.4 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID31498.1 - 3.6e-11 42.6 10.4 3.6e-08 33.0 2.9 2.7 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase DNA_gyraseB_C PF00986.21 AID31498.1 - 0.2 11.8 0.1 0.4 10.9 0.1 1.5 1 0 0 1 1 1 0 DNA gyrase B subunit, carboxyl terminus TauE PF01925.19 AID31499.1 - 2.1e-27 96.3 44.8 2.5e-27 96.0 44.8 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE LysR_substrate PF03466.20 AID31502.1 - 3.8e-35 121.1 8.9 5e-35 120.8 8.9 1.1 1 0 0 1 1 1 1 LysR substrate binding domain SBP_bac_11 PF13531.6 AID31502.1 - 0.00011 22.0 0.3 0.0006 19.6 0.1 2.0 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein adh_short PF00106.25 AID31503.1 - 2.8e-40 137.9 0.1 6.5e-40 136.7 0.1 1.5 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31503.1 - 2.3e-28 99.3 0.3 3.8e-28 98.6 0.3 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31503.1 - 3.1e-10 40.2 0.0 4.9e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31503.1 - 2.2e-05 24.1 0.1 3.9e-05 23.2 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AraC_N PF06719.13 AID31504.1 - 1.2e-47 161.2 0.1 1.7e-47 160.8 0.1 1.2 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus HTH_18 PF12833.7 AID31504.1 - 1.2e-19 70.3 2.3 2e-19 69.6 0.6 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31504.1 - 8.5e-13 48.0 0.4 9.5e-09 35.1 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family MarR_2 PF12802.7 AID31504.1 - 0.056 13.3 0.0 0.18 11.7 0.0 2.0 1 1 0 1 1 1 0 MarR family HTH_24 PF13412.6 AID31505.1 - 6.2e-07 28.9 1.4 6.2e-07 28.9 1.4 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 AID31505.1 - 1.4e-06 28.2 0.1 3.3e-06 27.0 0.1 1.7 1 1 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID31505.1 - 6.4e-06 25.9 1.4 6.4e-06 25.9 1.4 2.1 2 1 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_5 PF01022.20 AID31505.1 - 0.024 14.5 0.0 0.049 13.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 AID31505.1 - 0.04 13.7 0.7 0.12 12.2 0.1 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain DUF2089 PF09862.9 AID31505.1 - 0.04 13.9 0.0 0.12 12.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2089) GntR PF00392.21 AID31505.1 - 0.068 12.8 0.1 0.15 11.7 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF3853 PF12964.7 AID31505.1 - 0.079 13.1 0.1 0.65 10.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3853) HTH_DeoR PF08220.12 AID31505.1 - 0.11 12.3 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Spore_YhcN_YlaJ PF09580.10 AID31505.1 - 0.16 12.1 0.1 0.24 11.5 0.1 1.2 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HTH_11 PF08279.12 AID31505.1 - 0.17 11.9 0.5 0.41 10.6 0.2 1.9 2 0 0 2 2 2 0 HTH domain Sacchrp_dh_C PF16653.5 AID31506.1 - 1.4e-51 176.2 0.0 1.7e-51 175.9 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 AID31506.1 - 2.2e-12 47.4 0.1 5.1e-12 46.2 0.1 1.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 AID31506.1 - 0.036 14.2 0.0 0.056 13.6 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Epimerase PF01370.21 AID31506.1 - 0.17 11.3 0.0 0.26 10.7 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family SBP_bac_3 PF00497.20 AID31507.1 - 6.6e-46 156.5 0.0 8.7e-46 156.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID31507.1 - 5.3e-10 39.5 0.0 1.1e-09 38.4 0.0 1.6 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Phosphonate-bd PF12974.7 AID31507.1 - 0.06 12.9 0.0 0.21 11.2 0.0 1.8 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein BPD_transp_1 PF00528.22 AID31508.1 - 1.7e-15 57.3 10.9 1.7e-15 57.3 10.9 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID31509.1 - 8.2e-23 81.1 14.1 8.2e-23 81.1 14.1 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID31510.1 - 1.5e-33 116.2 0.0 1.9e-33 115.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID31510.1 - 1.4e-10 41.5 0.0 0.00034 20.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31510.1 - 5e-07 29.4 0.1 0.0017 17.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID31510.1 - 0.00019 21.1 0.0 0.00038 20.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31510.1 - 0.00023 21.1 0.0 0.00049 20.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID31510.1 - 0.00063 20.2 0.1 0.001 19.5 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID31510.1 - 0.00068 20.2 0.0 0.001 19.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID31510.1 - 0.0015 18.7 0.3 0.0028 17.8 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID31510.1 - 0.0018 18.1 0.0 0.045 13.5 0.0 2.0 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID31510.1 - 0.0019 18.5 0.0 0.0039 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 AID31510.1 - 0.002 18.1 0.0 0.0039 17.1 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_13 PF13166.6 AID31510.1 - 0.0024 16.6 0.0 0.24 10.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 AID31510.1 - 0.0051 16.7 0.0 0.0077 16.2 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain T2SSE PF00437.20 AID31510.1 - 0.016 14.3 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_ATPase PF09818.9 AID31510.1 - 0.022 13.6 0.1 4.1 6.1 0.0 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 AID31510.1 - 0.024 14.9 0.2 0.3 11.4 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 AID31510.1 - 0.026 15.0 0.0 0.049 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID31510.1 - 0.031 14.0 0.1 0.063 13.0 0.0 1.6 2 0 0 2 2 1 0 AAA domain CobU PF02283.16 AID31510.1 - 0.033 13.7 0.3 0.4 10.2 0.0 2.1 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase IstB_IS21 PF01695.17 AID31510.1 - 0.034 13.9 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA12 PF10443.9 AID31510.1 - 0.085 11.6 0.1 0.12 11.0 0.1 1.1 1 0 0 1 1 1 0 RNA12 protein cobW PF02492.19 AID31510.1 - 0.12 12.0 0.1 0.25 10.9 0.1 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 AID31510.1 - 0.14 12.1 0.1 0.27 11.1 0.1 1.5 1 0 0 1 1 1 0 NTPase NB-ARC PF00931.22 AID31510.1 - 0.17 11.1 0.0 0.42 9.8 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain RNA_helicase PF00910.22 AID31510.1 - 0.19 12.1 0.0 0.73 10.2 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 AID31510.1 - 0.2 11.3 0.0 0.46 10.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 AID31510.1 - 0.24 10.2 0.2 0.57 8.9 0.0 1.6 2 0 0 2 2 2 0 Adenovirus IVa2 protein Oxidored_FMN PF00724.20 AID31511.1 - 1e-80 271.6 0.0 1.2e-80 271.4 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family HTH_20 PF12840.7 AID31512.1 - 6.2e-18 64.6 0.3 9.1e-18 64.1 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31512.1 - 0.0017 18.2 0.2 0.0043 16.9 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID31512.1 - 0.029 14.3 0.4 0.062 13.2 0.2 1.6 2 0 0 2 2 2 0 MarR family DUF1824 PF08854.10 AID31512.1 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) RES PF08808.11 AID31513.1 - 2.4e-11 43.8 0.1 3e-11 43.5 0.1 1.1 1 0 0 1 1 1 1 RES domain RES PF08808.11 AID31514.1 - 1.4e-09 38.0 0.1 1.6e-09 37.9 0.1 1.0 1 0 0 1 1 1 1 RES domain Aldedh PF00171.22 AID31516.1 - 5.5e-152 506.5 0.0 6.1e-152 506.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ACT_7 PF13840.6 AID31517.1 - 1.4e-13 50.4 0.0 2.2e-13 49.8 0.0 1.3 1 0 0 1 1 1 1 ACT domain Acetyltransf_1 PF00583.25 AID31518.1 - 2.2e-13 50.5 0.1 2.9e-13 50.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID31518.1 - 8.2e-13 48.4 0.0 1.1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID31518.1 - 3.6e-11 43.3 0.1 5.2e-11 42.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID31518.1 - 0.00038 20.5 0.0 0.18 11.9 0.0 2.1 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID31518.1 - 0.00053 19.7 0.1 0.00069 19.4 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_6 PF13480.7 AID31518.1 - 0.0013 18.9 0.2 0.0025 18.0 0.2 1.6 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID31518.1 - 0.0061 16.7 0.0 0.01 15.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 AID31518.1 - 0.014 15.3 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein adh_short PF00106.25 AID31519.1 - 1.5e-44 151.8 0.0 1.9e-44 151.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31519.1 - 3.7e-36 124.9 0.1 4.7e-36 124.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31519.1 - 3.3e-08 33.7 0.0 4e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 KR domain Aldo_ket_red PF00248.21 AID31520.1 - 2.3e-75 253.5 0.0 2.7e-75 253.3 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2255 PF10012.9 AID31521.1 - 8.2e-43 145.2 0.4 9.2e-43 145.1 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2255) CMD PF02627.20 AID31522.1 - 5.3e-23 80.9 0.0 6.1e-23 80.7 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Cupin_2 PF07883.11 AID31523.1 - 8.9e-13 47.8 0.5 1.4e-12 47.1 0.5 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID31523.1 - 5.6e-06 26.3 0.1 7.2e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 AID31523.1 - 0.00074 19.2 0.2 0.014 15.0 0.1 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF861) Cupin_7 PF12973.7 AID31523.1 - 0.0062 16.4 0.0 0.014 15.3 0.0 1.6 1 0 0 1 1 1 1 ChrR Cupin-like domain CHAP PF05257.16 AID31523.1 - 0.049 14.2 0.6 0.095 13.3 0.5 1.6 1 1 0 1 1 1 0 CHAP domain LysR_substrate PF03466.20 AID31524.1 - 9.1e-37 126.4 2.1 1.6e-36 125.6 2.1 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31524.1 - 1.5e-22 79.3 5.1 3.1e-22 78.3 5.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 AID31524.1 - 0.0048 16.9 0.8 0.0048 16.9 0.8 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_23 PF13384.6 AID31524.1 - 0.032 14.0 0.1 0.088 12.6 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 AID31524.1 - 0.083 13.0 0.1 0.22 11.7 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 AID31524.1 - 0.095 12.6 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3261 PF11659.8 AID31524.1 - 0.099 12.5 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3261) HTH_34 PF13601.6 AID31524.1 - 0.19 11.9 0.1 0.4 10.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_30 PF13556.6 AID31524.1 - 0.27 11.1 2.5 0.22 11.3 0.5 1.9 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain HTH_50 PF18024.1 AID31524.1 - 0.3 10.7 0.2 0.3 10.7 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain SnoaL PF07366.12 AID31525.1 - 3.9e-39 133.3 0.0 4.3e-39 133.2 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 AID31525.1 - 7.2e-10 39.4 0.0 8.6e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 AID31525.1 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) Cons_hypoth698 PF03601.14 AID31526.1 - 1.4e-101 339.4 26.6 1.7e-101 339.2 26.6 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 DUF1858 PF08984.11 AID31527.1 - 6.6e-13 48.6 0.0 7.7e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1858) HTH_Crp_2 PF13545.6 AID31528.1 - 9.7e-20 70.3 0.7 1.7e-19 69.5 0.7 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain cNMP_binding PF00027.29 AID31528.1 - 6.4e-19 67.8 0.1 3.7e-18 65.4 0.0 2.1 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Crp PF00325.20 AID31528.1 - 6.6e-08 32.1 0.1 3.9e-07 29.6 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family HTH_23 PF13384.6 AID31528.1 - 3.7e-05 23.4 0.7 0.00021 21.0 0.1 2.4 2 0 0 2 2 2 1 Homeodomain-like domain MarR_2 PF12802.7 AID31528.1 - 0.0031 17.4 0.7 0.0082 16.0 0.1 2.2 2 1 0 2 2 2 1 MarR family LacI PF00356.21 AID31528.1 - 0.029 14.2 0.2 0.26 11.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_24 PF13412.6 AID31528.1 - 0.033 13.8 0.0 0.067 12.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID31528.1 - 0.037 14.0 0.1 0.13 12.3 0.0 1.9 1 1 0 1 1 1 0 Winged helix-turn helix Sigma70_r4 PF04545.16 AID31528.1 - 0.044 13.3 0.6 14 5.2 0.0 3.3 2 1 0 2 2 2 0 Sigma-70, region 4 HTH_28 PF13518.6 AID31528.1 - 0.066 13.4 1.6 0.51 10.5 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain Copper-bind PF00127.20 AID31529.1 - 1.7e-19 70.1 0.3 2.4e-19 69.6 0.3 1.2 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 AID31529.1 - 0.017 15.2 0.0 0.025 14.7 0.0 1.2 1 0 0 1 1 1 0 Cupredoxin-like domain Cu-oxidase PF00394.22 AID31530.1 - 2.9e-19 69.7 0.4 6.8e-19 68.5 0.1 1.8 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_3 PF07732.15 AID31530.1 - 5.6e-13 48.9 0.1 1.2e-12 47.9 0.1 1.5 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 AID31530.1 - 4.9e-07 29.6 1.3 0.00021 21.1 0.0 3.2 3 1 0 3 3 3 2 Multicopper oxidase Cupredoxin_1 PF13473.6 AID31530.1 - 0.0069 16.5 0.0 0.018 15.1 0.0 1.8 1 0 0 1 1 1 1 Cupredoxin-like domain DUF5640 PF18692.1 AID31530.1 - 0.16 12.0 0.0 0.77 9.8 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5640) FGE-sulfatase PF03781.16 AID31531.1 - 1.5e-42 146.0 0.4 2.8e-42 145.1 0.4 1.4 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 Bac_globin PF01152.21 AID31532.1 - 0.011 15.9 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial-like globin GAF_2 PF13185.6 AID31533.1 - 3.1e-08 34.0 0.1 4.5e-08 33.5 0.1 1.2 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 AID31533.1 - 0.00021 21.9 0.0 0.00025 21.7 0.0 1.2 1 0 0 1 1 1 1 GAF domain UNC45-central PF11701.8 AID31533.1 - 0.057 13.4 0.0 0.087 12.8 0.0 1.3 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central GAF_3 PF13492.6 AID31533.1 - 0.063 13.6 0.0 0.088 13.1 0.0 1.5 1 0 0 1 1 1 0 GAF domain GYD PF08734.11 AID31534.1 - 3.6e-19 68.5 0.2 4.3e-19 68.2 0.2 1.1 1 0 0 1 1 1 1 GYD domain Ephrin_lbd PF01404.19 AID31535.1 - 0.14 12.2 0.1 0.15 12.1 0.1 1.0 1 0 0 1 1 1 0 Ephrin receptor ligand binding domain Cpn60_TCP1 PF00118.24 AID31536.1 - 8.6e-96 321.5 21.5 2.5e-95 319.9 21.5 1.6 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family Cpn10 PF00166.21 AID31537.1 - 4.1e-36 122.9 0.1 4.7e-36 122.7 0.1 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit DUF1488 PF07369.11 AID31539.1 - 2e-16 59.8 0.0 2.1e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1488) DUF5532 PF17673.1 AID31540.1 - 0.01 15.9 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5532) GGDEF PF00990.21 AID31543.1 - 2.9e-39 134.4 0.0 3.9e-39 134.0 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID31543.1 - 0.0052 17.0 0.0 0.0093 16.2 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 AID31543.1 - 0.094 13.0 0.1 0.34 11.2 0.0 2.0 2 0 0 2 2 2 0 PAS fold PAS PF00989.25 AID31543.1 - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 PAS fold acVLRF1 PF18859.1 AID31543.1 - 6.4 7.1 9.1 2.2 8.6 2.6 2.5 2 1 0 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor Peripla_BP_3 PF13377.6 AID31544.1 - 3.4e-38 131.6 0.0 9.6e-38 130.1 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID31544.1 - 1.2e-23 83.9 0.0 1.8e-23 83.4 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID31544.1 - 3.6e-15 55.5 0.1 7.8e-15 54.4 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID31544.1 - 7.3e-11 42.1 0.0 2.5e-10 40.4 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_31 PF13560.6 AID31544.1 - 0.017 15.4 0.8 0.017 15.4 0.8 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain TetR_N PF00440.23 AID31544.1 - 0.067 13.0 0.1 0.15 11.8 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family PRODH PF18327.1 AID31544.1 - 0.075 13.3 0.5 0.22 11.8 0.5 1.8 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain HTH_10 PF04967.12 AID31544.1 - 0.11 12.4 0.0 0.32 10.8 0.0 1.7 2 0 0 2 2 2 0 HTH DNA binding domain SBP_bac_8 PF13416.6 AID31545.1 - 1.1e-36 127.1 7.9 1.1e-36 127.1 7.9 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID31545.1 - 1.2e-31 110.8 10.4 1.2e-31 110.8 10.4 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID31545.1 - 7.6e-05 22.2 0.1 0.0014 18.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID31545.1 - 0.00066 19.5 0.2 0.0019 18.0 0.2 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID31546.1 - 2.9e-14 53.2 28.8 2.9e-14 53.2 28.8 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SIT PF15330.6 AID31546.1 - 5.3 7.5 5.7 19 5.7 0.2 2.5 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT BPD_transp_1 PF00528.22 AID31547.1 - 4.1e-20 72.3 17.7 4.1e-20 72.3 17.7 1.8 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2569 PF10754.9 AID31547.1 - 0.12 12.8 9.2 0.025 15.0 3.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2569) Glyco_hydro_127 PF07944.12 AID31548.1 - 5.2e-192 638.9 0.0 6.1e-192 638.7 0.0 1.0 1 0 0 1 1 1 1 Beta-L-arabinofuranosidase, GH127 Glyco_hydro_88 PF07470.13 AID31548.1 - 0.023 13.8 0.6 0.75 8.8 0.2 2.4 1 1 1 2 2 2 0 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 AID31548.1 - 0.071 12.6 0.1 3.7 6.9 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 76 Acyl_transf_3 PF01757.22 AID31549.1 - 1.4e-21 77.0 40.9 1.8e-21 76.6 40.9 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF1801 PF08818.11 AID31550.1 - 1.2e-19 70.6 0.0 1.6e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DU1801) DUF1801 PF08818.11 AID31551.1 - 7.1e-17 61.7 0.0 8.8e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DU1801) DUF5058 PF16481.5 AID31552.1 - 0.0028 17.4 0.0 0.0031 17.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) Acyl_transf_3 PF01757.22 AID31552.1 - 0.0033 16.5 1.7 0.0034 16.5 1.7 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF4405 PF14358.6 AID31552.1 - 0.09 13.3 1.5 3 8.5 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) PepSY_TM PF03929.16 AID31552.1 - 0.14 11.8 1.3 11 5.6 0.0 2.0 2 0 0 2 2 2 0 PepSY-associated TM region Glyoxalase PF00903.25 AID31553.1 - 2e-11 44.2 0.0 2.4e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID31553.1 - 0.0016 18.7 0.0 0.0029 17.8 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID31553.1 - 0.02 15.7 0.0 0.025 15.4 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase-like domain AHSA1 PF08327.11 AID31554.1 - 4.5e-28 98.0 0.1 5.3e-28 97.8 0.1 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID31554.1 - 2.5e-08 34.3 0.1 3.2e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport HTH_20 PF12840.7 AID31555.1 - 6.6e-14 51.7 0.1 9.5e-14 51.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31555.1 - 8.1e-12 44.8 0.0 1.1e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID31555.1 - 8.2e-07 28.8 0.2 1.2e-06 28.3 0.2 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID31555.1 - 3.9e-06 26.3 0.0 5.6e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 AID31555.1 - 1.8e-05 24.5 0.0 2.6e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 AID31555.1 - 0.00033 20.5 0.0 0.00053 19.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_9 PF08221.11 AID31555.1 - 0.0024 17.9 0.0 0.0036 17.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_IclR PF09339.10 AID31555.1 - 0.011 15.5 0.1 0.019 14.8 0.1 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Rrf2 PF02082.20 AID31555.1 - 0.017 15.5 0.0 0.022 15.1 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 AID31555.1 - 0.061 13.3 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_1 PF00126.27 AID31555.1 - 0.065 13.2 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Penicillinase_R PF03965.16 AID31555.1 - 0.071 13.5 0.0 0.084 13.2 0.0 1.4 1 1 0 1 1 1 0 Penicillinase repressor HTH_27 PF13463.6 AID31555.1 - 0.095 13.2 0.0 0.16 12.5 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain NAD_binding_10 PF13460.6 AID31556.1 - 3.8e-22 79.1 1.1 5.3e-22 78.6 1.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AID31556.1 - 1.1e-17 64.4 0.0 1.5e-17 63.9 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 AID31556.1 - 3.2e-09 36.6 0.2 3.2e-09 36.6 0.2 1.5 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID31556.1 - 0.00037 19.6 0.0 0.00071 18.7 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID31556.1 - 0.00064 18.9 1.2 0.0034 16.5 0.1 2.1 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 AID31556.1 - 0.00081 18.6 0.0 0.0014 17.9 0.0 1.5 1 0 0 1 1 1 1 Male sterility protein adh_short PF00106.25 AID31556.1 - 0.0012 18.4 0.4 0.0012 18.4 0.4 1.6 2 0 0 2 2 2 1 short chain dehydrogenase GDP_Man_Dehyd PF16363.5 AID31556.1 - 0.0014 18.1 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 AID31556.1 - 0.0062 16.8 0.4 0.0062 16.8 0.4 1.5 2 0 0 2 2 2 1 TrkA-N domain Polysacc_synt_2 PF02719.15 AID31556.1 - 0.0062 15.7 0.1 0.014 14.5 0.1 1.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein F420_oxidored PF03807.17 AID31556.1 - 0.0091 16.6 0.0 0.024 15.2 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent KR PF08659.10 AID31556.1 - 0.043 13.7 1.1 0.21 11.5 0.9 2.2 2 1 0 2 2 2 0 KR domain DapB_N PF01113.20 AID31556.1 - 0.053 13.6 0.1 0.096 12.8 0.1 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ChaC PF04752.12 AID31557.1 - 5.2e-52 176.5 0.0 6.4e-52 176.2 0.0 1.1 1 0 0 1 1 1 1 ChaC-like protein DDHD PF02862.17 AID31557.1 - 0.002 18.3 0.0 0.0025 18.0 0.0 1.2 1 0 0 1 1 1 1 DDHD domain HSP20 PF00011.21 AID31558.1 - 2.5e-20 72.5 0.2 3.1e-20 72.2 0.2 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID31558.1 - 1.4e-08 34.2 0.0 2.2e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA LysR_substrate PF03466.20 AID31560.1 - 2.5e-34 118.5 4.4 4e-34 117.8 4.4 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31560.1 - 4e-17 61.9 0.1 9.6e-17 60.7 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 AID31560.1 - 0.056 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MFS_1 PF07690.16 AID31561.1 - 2.3e-27 95.9 89.3 1.7e-22 79.8 48.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2270 PF10028.9 AID31562.1 - 1.5e-67 226.8 5.8 1.7e-67 226.5 5.8 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2270) Na_H_Exchanger PF00999.21 AID31563.1 - 1.6e-54 185.2 45.5 2.3e-54 184.6 45.5 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Usp PF00582.26 AID31563.1 - 9.9e-15 55.3 5.2 1.2e-13 51.8 2.1 2.3 2 0 0 2 2 2 2 Universal stress protein family PAS_4 PF08448.10 AID31565.1 - 4.2e-36 123.5 6.9 5.6e-10 39.5 0.2 5.2 5 0 0 5 5 5 4 PAS fold PAS_3 PF08447.12 AID31565.1 - 6e-35 119.4 0.8 3.2e-23 81.8 0.2 3.6 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.7 AID31565.1 - 3.8e-23 81.7 0.0 7.6e-09 35.8 0.0 4.3 4 0 0 4 4 4 4 PAS domain HWE_HK PF07536.14 AID31565.1 - 5.6e-22 78.3 0.6 1.2e-21 77.2 0.6 1.6 1 0 0 1 1 1 1 HWE histidine kinase PAS PF00989.25 AID31565.1 - 4.3e-13 49.3 0.0 0.00021 21.3 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_10 PF13596.6 AID31565.1 - 1.8e-05 25.3 0.0 4.9 7.8 0.0 4.0 4 0 0 4 4 4 2 PAS domain HisKA_2 PF07568.12 AID31565.1 - 0.0001 22.3 0.6 0.00021 21.3 0.6 1.5 1 0 0 1 1 1 1 Histidine kinase HATPase_c_2 PF13581.6 AID31565.1 - 0.0025 17.7 0.0 0.0055 16.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 AID31565.1 - 0.0026 17.7 0.1 0.91 9.6 0.0 3.1 3 0 0 3 3 3 1 PAS domain sCache_3_3 PF17202.4 AID31565.1 - 0.003 18.0 0.0 1.4 9.4 0.0 3.5 3 0 0 3 3 3 1 Single cache domain 3 PAS_11 PF14598.6 AID31565.1 - 0.051 13.7 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 PAS domain Response_reg PF00072.24 AID31568.1 - 2.2e-15 56.8 0.0 2.6e-15 56.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain OKR_DC_1_N PF03709.15 AID31568.1 - 0.047 14.0 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain DOPA_dioxygen PF08883.11 AID31569.1 - 1.3e-30 105.7 0.1 1.6e-30 105.4 0.1 1.1 1 0 0 1 1 1 1 Dopa 4,5-dioxygenase family EAL PF00563.20 AID31570.1 - 4e-59 200.0 0.0 7.3e-59 199.2 0.0 1.4 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID31570.1 - 2.8e-34 118.2 0.0 4.4e-34 117.6 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 AID31570.1 - 0.0002 21.6 0.0 0.00061 20.0 0.0 1.8 1 0 0 1 1 1 1 GGDEF-like domain OCD_Mu_crystall PF02423.15 AID31571.1 - 1.4e-43 149.1 0.0 2.6e-43 148.2 0.0 1.4 1 1 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 AID31571.1 - 0.047 13.8 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 AID31571.1 - 0.095 13.3 0.0 0.18 12.4 0.0 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GreA_GreB PF01272.19 AID31572.1 - 1.4e-18 66.5 0.0 2.6e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Usp PF00582.26 AID31573.1 - 1.1e-07 32.4 4.0 3.2e-06 27.7 1.8 2.9 2 1 0 2 2 2 1 Universal stress protein family Kelch_2 PF07646.15 AID31573.1 - 0.2 11.7 0.2 0.47 10.5 0.2 1.6 1 0 0 1 1 1 0 Kelch motif E1-E2_ATPase PF00122.20 AID31574.1 - 1.5e-42 145.2 0.0 1.5e-42 145.2 0.0 2.3 2 1 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 AID31574.1 - 1.4e-24 86.8 5.7 2.8e-24 85.8 5.7 1.5 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 AID31574.1 - 7.6e-22 78.6 1.3 1.6e-21 77.6 1.3 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 AID31574.1 - 1.9e-07 30.7 0.0 4.7e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 AID31574.1 - 0.00026 20.8 0.6 0.0014 18.4 0.4 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID31574.1 - 0.066 13.6 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase AI-2E_transport PF01594.16 AID31575.1 - 7.5e-50 169.9 21.2 8.5e-50 169.7 21.2 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF975 PF06161.11 AID31575.1 - 0.32 10.8 6.2 0.18 11.5 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF975) VIT1 PF01988.19 AID31576.1 - 3.8e-23 82.5 10.7 4.2e-23 82.3 10.7 1.0 1 0 0 1 1 1 1 VIT family SHOCT PF09851.9 AID31578.1 - 6.7e-09 35.2 0.2 9.5e-09 34.7 0.2 1.2 1 0 0 1 1 1 1 Short C-terminal domain DUF302 PF03625.14 AID31579.1 - 7e-25 86.7 0.1 1e-24 86.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 HlyD_3 PF13437.6 AID31580.1 - 7.4e-13 49.1 5.9 9.7e-07 29.5 0.3 3.4 3 1 1 4 4 4 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID31580.1 - 8.2e-10 38.3 9.3 5.1e-09 35.7 1.1 3.5 3 1 0 3 3 3 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID31580.1 - 2.5e-08 33.6 0.0 6.1e-05 22.8 0.0 3.1 2 0 0 2 2 2 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID31580.1 - 9.4e-05 22.2 0.0 0.064 13.1 0.0 2.8 2 0 0 2 2 2 2 Biotin-requiring enzyme MazE_antitoxin PF04014.18 AID31580.1 - 0.043 13.8 0.5 11 6.1 0.1 3.6 3 0 0 3 3 3 0 Antidote-toxin recognition MazE, bacterial antitoxin DUF4131 PF13567.6 AID31580.1 - 1.4 8.6 5.0 4.4 6.9 2.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) FtsX PF02687.21 AID31581.1 - 2.5e-10 40.7 15.4 2.9e-06 27.6 5.5 4.9 6 0 0 6 6 6 2 FtsX-like permease family Molydop_binding PF01568.21 AID31581.1 - 0.014 15.5 0.1 1.8 8.6 0.1 2.3 2 0 0 2 2 2 0 Molydopterin dinucleotide binding domain Sigma_reg_N PF13800.6 AID31581.1 - 1.5 9.2 2.9 36 4.7 0.2 3.3 3 0 0 3 3 3 0 Sigma factor regulator N-terminal ABC_tran PF00005.27 AID31582.1 - 9e-34 116.9 0.0 1.3e-33 116.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 AID31582.1 - 0.00014 21.5 0.1 0.00028 20.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID31582.1 - 0.00021 21.3 0.0 0.00036 20.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 AID31582.1 - 0.0007 19.1 0.0 0.8 9.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID31582.1 - 0.00089 19.2 0.3 0.0022 17.8 0.2 1.7 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID31582.1 - 0.0045 17.4 0.1 0.0069 16.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID31582.1 - 0.012 15.9 0.1 0.018 15.3 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID31582.1 - 0.019 14.6 0.2 0.059 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID31582.1 - 0.023 15.2 0.1 0.036 14.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 AID31582.1 - 0.028 13.5 0.0 0.05 12.7 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 AID31582.1 - 0.038 14.1 0.1 0.12 12.4 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID31582.1 - 0.038 14.5 0.0 0.053 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID31582.1 - 0.044 14.2 0.0 0.07 13.5 0.0 1.3 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 AID31582.1 - 0.047 13.4 0.0 0.16 11.7 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 AID31582.1 - 0.074 13.3 0.0 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 AID31582.1 - 0.11 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Dynamin family G-alpha PF00503.20 AID31582.1 - 0.12 11.5 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Rad17 PF03215.15 AID31582.1 - 0.16 11.9 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 AID31582.1 - 0.17 11.5 0.1 0.27 10.9 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain HATPase_c PF02518.26 AID31583.1 - 1.5e-12 48.0 0.0 1e-10 42.1 0.0 2.6 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID31583.1 - 1.1e-07 31.7 1.1 1.1e-07 31.7 1.1 2.6 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 AID31583.1 - 1.3e-05 25.5 1.1 1.3e-05 25.5 1.1 2.5 2 1 0 2 2 2 1 HAMP domain 2CSK_N PF08521.10 AID31583.1 - 0.00015 21.9 2.5 0.00061 19.9 2.5 2.0 1 1 0 1 1 1 1 Two-component sensor kinase N-terminal CLZ PF16526.5 AID31583.1 - 0.24 11.8 2.3 0.42 11.0 0.5 2.2 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Response_reg PF00072.24 AID31584.1 - 1.7e-22 79.7 0.1 2.3e-22 79.3 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID31584.1 - 2.4e-22 78.8 0.2 4e-22 78.1 0.2 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal GerE PF00196.19 AID31584.1 - 0.021 14.4 0.3 0.35 10.5 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family PepSY_2 PF13670.6 AID31586.1 - 4.2e-20 71.5 0.0 5.4e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain Ni_hydr_CYTB PF01292.20 AID31587.1 - 3.7e-19 69.0 3.2 4.4e-19 68.8 3.2 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AID31587.1 - 0.00052 20.5 5.1 0.046 14.3 2.0 3.1 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) DUF2271 PF10029.9 AID31588.1 - 6.6e-32 110.0 0.0 7.5e-32 109.8 0.0 1.0 1 0 0 1 1 1 1 Predicted periplasmic protein (DUF2271) PepSY_TM PF03929.16 AID31590.1 - 5.6e-33 114.8 15.5 8.6e-33 114.2 14.8 1.6 2 0 0 2 2 2 1 PepSY-associated TM region NAD_binding_1 PF00175.21 AID31590.1 - 4.3e-13 49.9 0.0 7.6e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Flavodoxin_1 PF00258.25 AID31590.1 - 1.9e-12 47.6 0.0 3.8e-12 46.6 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin FAD_binding_6 PF00970.24 AID31590.1 - 0.0072 16.6 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Ni_hydr_CYTB PF01292.20 AID31590.1 - 4.3 6.9 13.1 1.7 8.2 0.3 3.3 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 DUF2306 PF10067.9 AID31590.1 - 7.6 6.7 13.4 4.2 7.6 0.1 3.2 3 1 0 3 3 3 0 Predicted membrane protein (DUF2306) Glycoamylase PF10091.9 AID31591.1 - 1.3e-80 270.1 0.0 2.1e-80 269.4 0.0 1.3 1 0 0 1 1 1 1 Putative glucoamylase Phage_integrase PF00589.22 AID31592.1 - 2.9e-10 40.2 0.0 3.1e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family PIF1 PF05970.14 AID31593.1 - 0.0061 15.8 0.0 0.011 14.9 0.0 1.4 1 0 0 1 1 1 1 PIF1-like helicase KAP_NTPase PF07693.14 AID31593.1 - 0.034 13.4 0.1 1.6 7.9 0.0 2.2 2 0 0 2 2 2 0 KAP family P-loop domain EII-GUT PF03608.13 AID31594.1 - 0.036 14.0 0.1 0.037 13.9 0.1 1.2 1 0 0 1 1 1 0 PTS system enzyme II sorbitol-specific factor Pox_I5 PF04713.12 AID31594.1 - 0.053 13.6 0.8 0.097 12.7 0.8 1.6 1 1 0 1 1 1 0 Poxvirus protein I5 Ni_hydr_CYTB PF01292.20 AID31594.1 - 0.054 13.1 2.0 0.06 12.9 2.0 1.0 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 NB-ARC PF00931.22 AID31596.1 - 4e-06 26.2 0.1 3e-05 23.3 0.1 2.1 1 1 0 1 1 1 1 NB-ARC domain TPR_10 PF13374.6 AID31596.1 - 0.011 15.6 1.1 0.76 9.7 0.1 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_21 PF09976.9 AID31596.1 - 0.014 15.1 5.0 0.016 14.9 1.8 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain TPR_8 PF13181.6 AID31596.1 - 0.016 15.4 0.1 1.7 9.1 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Zeta_toxin PF06414.12 AID31596.1 - 0.024 13.9 0.0 0.056 12.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin TPR_12 PF13424.6 AID31596.1 - 0.031 14.6 0.7 1.3 9.3 0.1 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 AID31596.1 - 0.084 12.9 2.0 1.8 8.8 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat AAA_16 PF13191.6 AID31596.1 - 0.45 10.9 0.0 0.45 10.9 0.0 3.6 2 2 1 4 4 4 0 AAA ATPase domain TPR_2 PF07719.17 AID31596.1 - 1.1 9.6 5.4 0.45 10.7 0.3 3.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID31596.1 - 5.3 8.0 10.7 16 6.5 0.0 4.8 4 0 0 4 4 4 0 Tetratricopeptide repeat ThiS PF02597.20 AID31598.1 - 3.5e-07 30.8 0.0 3.9e-07 30.6 0.0 1.0 1 0 0 1 1 1 1 ThiS family Lambda_tail_I PF06805.12 AID31598.1 - 0.0023 18.2 0.0 0.0026 18.1 0.0 1.1 1 0 0 1 1 1 1 Bacteriophage lambda tail assembly protein I CIDE-N PF02017.15 AID31598.1 - 0.12 12.5 0.0 0.18 11.9 0.0 1.3 1 1 0 1 1 1 0 CIDE-N domain Pre-PUA PF17832.1 AID31598.1 - 0.13 13.0 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Pre-PUA-like domain Tail_VII PF17091.5 AID31598.1 - 0.23 11.3 1.9 1.9 8.4 0.2 2.2 2 0 0 2 2 2 0 Inovirus G7P protein Ald_Xan_dh_C2 PF02738.18 AID31599.1 - 3.1e-129 431.9 3.7 4.2e-129 431.5 3.7 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID31599.1 - 1.8e-30 105.6 0.4 3.6e-30 104.5 0.4 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer2_2 PF01799.20 AID31600.1 - 8e-29 99.5 0.1 1.3e-28 98.8 0.1 1.3 1 0 0 1 1 1 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID31600.1 - 5.6e-07 29.4 5.6 5.6e-07 29.4 5.6 1.9 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_5 PF00941.21 AID31601.1 - 6.8e-39 133.3 0.1 1.3e-38 132.4 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID31601.1 - 1.1e-24 86.6 1.3 2.5e-24 85.4 1.3 1.6 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain AHSA1 PF08327.11 AID31602.1 - 7.3e-27 94.1 0.0 8.3e-27 93.9 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID31602.1 - 0.0014 18.9 0.0 0.002 18.4 0.0 1.4 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Peptidase_M20 PF01546.28 AID31604.1 - 1.2e-13 51.3 0.0 1.4e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID31604.1 - 2.6e-05 24.1 0.0 6.4e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 AID31605.1 - 0.014 15.1 0.0 0.015 15.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 EAL PF00563.20 AID31606.1 - 7.9e-60 202.3 0.0 1.5e-58 198.1 0.0 2.3 2 0 0 2 2 2 1 EAL domain GGDEF PF00990.21 AID31606.1 - 3.2e-43 147.3 0.0 4.7e-43 146.7 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Methyltransf_25 PF13649.6 AID31607.1 - 2.3e-05 25.0 0.0 6.1e-05 23.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID31607.1 - 0.00064 19.6 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 AID31607.1 - 0.00072 20.5 0.1 0.0056 17.7 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31607.1 - 0.0014 19.3 0.0 0.0046 17.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID31607.1 - 0.0052 17.5 0.0 0.013 16.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Sigma70_r2 PF04542.14 AID31608.1 - 1.3e-20 72.9 1.9 2.2e-20 72.2 1.9 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID31608.1 - 2.1e-10 40.1 0.0 3.5e-10 39.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_2 PF12680.7 AID31608.1 - 6.8e-08 33.1 0.1 2.2e-07 31.4 0.0 1.9 2 0 0 2 2 2 1 SnoaL-like domain Sigma70_r4 PF04545.16 AID31608.1 - 6.6e-07 28.8 0.1 1.3e-06 27.9 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 SnoaL_3 PF13474.6 AID31608.1 - 2.1e-05 24.8 0.0 4.5e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 SnoaL-like domain Sigma70_ECF PF07638.11 AID31608.1 - 0.00074 19.5 0.6 0.002 18.0 0.0 1.8 2 0 0 2 2 2 1 ECF sigma factor Sigma70_r3 PF04539.16 AID31608.1 - 0.2 11.8 0.0 0.38 10.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-70 region 3 RibD_C PF01872.17 AID31609.1 - 7e-21 75.0 0.1 8.8e-21 74.6 0.1 1.1 1 0 0 1 1 1 1 RibD C-terminal domain PfkB PF00294.24 AID31610.1 - 1.3e-22 80.5 0.0 4.9e-12 45.8 0.0 2.1 2 0 0 2 2 2 2 pfkB family carbohydrate kinase Amidohydro_3 PF07969.11 AID31612.1 - 7.4e-10 38.9 3.4 7.7e-07 28.9 0.8 2.7 2 1 1 3 3 3 2 Amidohydrolase family Amidohydro_1 PF01979.20 AID31612.1 - 2e-08 33.9 2.7 9.9e-08 31.7 2.7 2.1 1 1 0 1 1 1 1 Amidohydrolase family TMEM65 PF10507.9 AID31613.1 - 0.057 13.4 0.3 0.06 13.3 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 65 Peripla_BP_4 PF13407.6 AID31614.1 - 1.4e-46 159.2 17.3 1.7e-46 158.9 17.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID31614.1 - 3e-17 62.9 3.0 3.8e-17 62.6 3.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID31614.1 - 1.7e-08 35.0 0.4 4e-08 33.8 0.2 1.7 1 1 0 1 1 1 1 Periplasmic binding protein-like domain BPD_transp_2 PF02653.16 AID31616.1 - 7.9e-41 140.0 49.7 1.3e-40 139.2 49.7 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component PAP_central PF04928.17 AID31616.1 - 0.18 10.8 0.2 0.28 10.1 0.2 1.2 1 0 0 1 1 1 0 Poly(A) polymerase central domain ABC_tran PF00005.27 AID31617.1 - 4.8e-28 98.4 0.0 6.6e-28 97.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID31617.1 - 3e-08 33.4 0.1 1.9e-07 30.8 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID31617.1 - 4.1e-07 30.1 0.0 0.00021 21.2 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 AID31617.1 - 5.9e-06 25.3 4.4 0.039 12.7 0.1 3.7 1 1 1 3 3 3 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 AID31617.1 - 3.6e-05 23.4 0.0 7.3e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID31617.1 - 7.5e-05 23.3 0.0 0.00018 22.1 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID31617.1 - 9.5e-05 22.2 0.7 0.33 10.6 0.2 2.5 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 AID31617.1 - 0.00092 18.8 0.0 0.42 10.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 AID31617.1 - 0.0016 18.8 0.4 0.04 14.2 0.4 2.3 1 1 0 1 1 1 1 AAA domain MukB PF04310.12 AID31617.1 - 0.0024 17.7 0.0 0.004 17.0 0.0 1.3 1 0 0 1 1 1 1 MukB N-terminal RsgA_GTPase PF03193.16 AID31617.1 - 0.0024 17.8 0.0 0.0096 15.8 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID31617.1 - 0.0029 18.0 0.2 0.0082 16.5 0.2 1.9 1 1 1 2 2 2 1 AAA ATPase domain AAA_10 PF12846.7 AID31617.1 - 0.021 13.7 0.1 0.87 8.4 0.1 2.5 1 1 2 3 3 3 0 AAA-like domain MMR_HSR1 PF01926.23 AID31617.1 - 0.021 14.9 0.0 0.075 13.1 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_15 PF13175.6 AID31617.1 - 0.047 13.4 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 AID31617.1 - 0.053 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 AID31617.1 - 0.065 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Dynamin family AAA_24 PF13479.6 AID31617.1 - 0.21 11.3 0.0 0.64 9.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain GFO_IDH_MocA PF01408.22 AID31618.1 - 1.3e-22 80.8 0.0 2.2e-22 80.2 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID31618.1 - 0.11 12.5 0.0 0.27 11.2 0.0 1.6 2 0 0 2 2 2 0 Oxidoreductase family, C-terminal alpha/beta domain Biotin_carb_N PF00289.22 AID31618.1 - 0.18 12.4 0.0 0.33 11.5 0.0 1.4 1 0 0 1 1 1 0 Biotin carboxylase, N-terminal domain Amidase PF01425.21 AID31619.1 - 7.4e-53 180.1 0.0 2.4e-44 152.1 0.0 2.2 2 0 0 2 2 2 2 Amidase DUF4140 PF13600.6 AID31619.1 - 0.14 12.6 0.0 0.42 11.1 0.0 1.8 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Hexapep_2 PF14602.6 AID31620.1 - 3.5e-11 42.6 1.3 5.4e-11 42.1 1.3 1.3 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 AID31620.1 - 3.5e-10 39.2 2.7 3.5e-10 39.2 2.7 2.0 2 0 0 2 2 2 1 Bacterial transferase hexapeptide (six repeats) ThuA PF06283.11 AID31621.1 - 3e-40 138.7 0.0 3.4e-40 138.5 0.0 1.0 1 0 0 1 1 1 1 Trehalose utilisation Bac_luciferase PF00296.20 AID31622.1 - 7.7e-23 81.4 1.6 1.3e-22 80.7 1.6 1.2 1 0 0 1 1 1 1 Luciferase-like monooxygenase CoA_transf_3 PF02515.17 AID31623.1 - 2.2e-78 263.9 0.1 3e-78 263.5 0.1 1.2 1 0 0 1 1 1 1 CoA-transferase family III Aldedh PF00171.22 AID31626.1 - 6.8e-174 578.7 0.2 7.7e-174 578.5 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 AID31626.1 - 0.0022 17.1 0.0 0.0052 15.9 0.0 1.4 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.11 AID31626.1 - 0.082 12.3 0.0 0.77 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) MR_MLE_C PF13378.6 AID31627.1 - 1e-36 126.6 0.1 1.5e-36 126.0 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID31627.1 - 1.6e-14 54.1 0.0 5.7e-14 52.3 0.0 1.8 2 0 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NIPSNAP PF07978.13 AID31628.1 - 2.5e-31 107.9 0.1 2.8e-31 107.8 0.1 1.0 1 0 0 1 1 1 1 NIPSNAP MR_MLE_C PF13378.6 AID31629.1 - 4.3e-45 154.0 0.3 1.4e-44 152.3 0.3 1.8 1 1 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID31629.1 - 4.3e-10 39.8 0.0 1e-09 38.6 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE_C PF13378.6 AID31630.1 - 1.8e-61 207.5 0.0 2.3e-61 207.2 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID31630.1 - 1.8e-20 73.3 0.0 3.2e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FCD PF07729.12 AID31631.1 - 1.5e-19 70.6 9.6 1.5e-19 70.6 9.6 1.9 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID31631.1 - 3.3e-14 52.3 0.3 6.8e-14 51.3 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID31631.1 - 0.085 12.4 0.1 0.18 11.4 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 AID31631.1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 AID31631.1 - 0.54 10.4 0.1 0.54 10.4 0.1 2.7 2 1 1 3 3 3 0 Helix-turn-helix domain SBP_bac_1 PF01547.25 AID31632.1 - 2.3e-31 109.9 9.3 3.8e-31 109.2 9.3 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID31632.1 - 3.1e-24 86.3 6.8 4.8e-24 85.6 6.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID31633.1 - 8.4e-15 55.0 21.3 8.4e-15 55.0 21.3 2.2 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID31634.1 - 1e-17 64.5 20.0 1e-17 64.5 20.0 2.2 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID31635.1 - 1.3e-29 103.5 0.0 2.2e-29 102.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 AID31635.1 - 4.3e-10 39.7 0.1 1.6e-09 37.9 0.0 2.0 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID31635.1 - 1.4e-08 34.9 0.0 0.0019 18.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID31635.1 - 1.8e-05 24.3 0.4 0.00015 21.3 0.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain OB_MalK PF17912.1 AID31635.1 - 5.5e-05 23.9 0.0 0.00025 21.8 0.0 2.2 1 0 0 1 1 1 1 MalK OB fold domain AAA_16 PF13191.6 AID31635.1 - 0.0016 18.9 0.3 0.0069 16.8 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain TOBE_2 PF08402.10 AID31635.1 - 0.0044 17.2 0.0 0.012 15.8 0.0 1.8 1 0 0 1 1 1 1 TOBE domain RsgA_GTPase PF03193.16 AID31635.1 - 0.0079 16.1 0.1 0.016 15.1 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA PF00004.29 AID31635.1 - 0.014 15.8 0.0 0.038 14.4 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 AID31635.1 - 0.015 15.3 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_22 PF13401.6 AID31635.1 - 0.017 15.4 0.2 0.028 14.7 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID31635.1 - 0.021 14.5 0.4 0.066 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID31635.1 - 0.023 14.4 0.0 0.056 13.1 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 AID31635.1 - 0.025 15.1 0.7 0.051 14.1 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 AID31635.1 - 0.032 14.0 0.0 0.11 12.3 0.0 1.9 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 AID31635.1 - 0.075 13.0 0.0 0.32 11.0 0.0 2.0 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 AID31635.1 - 0.084 12.4 0.6 0.27 10.8 0.1 2.0 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 AID31635.1 - 0.088 11.9 0.1 0.25 10.3 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_28 PF13521.6 AID31635.1 - 0.1 12.8 0.6 0.27 11.5 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID31635.1 - 0.11 13.0 0.0 0.25 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID31635.1 - 0.13 11.6 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 AID31635.1 - 0.15 11.6 0.1 0.26 10.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region MR_MLE_C PF13378.6 AID31636.1 - 2.7e-45 154.6 0.0 3.7e-45 154.2 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID31636.1 - 1.5e-20 73.5 0.0 2.6e-20 72.8 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RraA-like PF03737.15 AID31637.1 - 2.2e-37 128.5 0.2 2.9e-37 128.1 0.2 1.1 1 0 0 1 1 1 1 Aldolase/RraA Flavin_Reduct PF01613.18 AID31638.1 - 1.2e-22 80.7 0.0 1.3e-22 80.5 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Acyl-CoA_dh_2 PF08028.11 AID31639.1 - 2.2e-15 57.1 2.7 2.6e-15 56.9 2.7 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 AID31639.1 - 1.2e-05 25.6 2.2 1.7e-05 25.1 2.2 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DUF2219 PF09982.9 AID31639.1 - 0.051 12.8 0.9 2 7.6 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2219) Acyl-CoA_dh_N PF02771.16 AID31640.1 - 0.033 14.9 0.1 0.055 14.1 0.1 1.4 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain Abhydrolase_1 PF00561.20 AID31642.1 - 2.5e-23 83.1 0.0 5.3e-19 68.9 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID31642.1 - 2.5e-23 83.9 12.3 2.8e-23 83.7 12.3 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID31642.1 - 2.2e-16 59.8 0.0 3.1e-16 59.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 AID31642.1 - 0.00028 21.1 0.0 0.00051 20.2 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain DLH PF01738.18 AID31642.1 - 0.00041 20.0 0.0 0.69 9.4 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_4 PF08386.10 AID31642.1 - 0.0015 18.6 0.0 0.0041 17.2 0.0 1.7 2 0 0 2 2 1 1 TAP-like protein FSH1 PF03959.13 AID31642.1 - 0.0019 17.9 0.0 0.029 14.0 0.0 2.3 2 1 0 2 2 2 1 Serine hydrolase (FSH1) Ser_hydrolase PF06821.13 AID31642.1 - 0.003 17.4 0.0 0.18 11.7 0.0 2.1 2 0 0 2 2 2 1 Serine hydrolase Peptidase_S9 PF00326.21 AID31642.1 - 0.009 15.5 0.0 4.1 6.8 0.0 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family UPF0227 PF05728.12 AID31642.1 - 0.015 15.3 0.0 0.04 13.8 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Abhydrolase_3 PF07859.13 AID31642.1 - 0.023 14.6 0.1 0.043 13.7 0.1 1.6 1 1 0 1 1 1 0 alpha/beta hydrolase fold LIDHydrolase PF10230.9 AID31642.1 - 0.071 12.6 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase DUF1057 PF06342.12 AID31642.1 - 0.24 10.4 0.0 0.38 9.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Dehydratase_LU PF02286.15 AID31645.1 - 5.2e-252 837.4 0.0 6.2e-252 837.1 0.0 1.0 1 0 0 1 1 1 1 Dehydratase large subunit Dehydratase_MU PF02288.15 AID31645.1 - 8.3e-26 90.0 0.5 5.7e-25 87.3 0.0 2.6 3 0 0 3 3 3 1 Dehydratase medium subunit EutB PF06751.11 AID31645.1 - 0.12 11.1 0.1 0.45 9.3 0.0 1.9 3 0 0 3 3 3 0 Ethanolamine ammonia lyase large subunit (EutB) Dehydratase_SU PF02287.15 AID31646.1 - 6.5e-49 165.4 0.1 7.4e-49 165.2 0.1 1.0 1 0 0 1 1 1 1 Dehydratase small subunit Isochorismatase PF00857.20 AID31647.1 - 1.3e-32 113.4 0.1 2.4e-32 112.5 0.1 1.4 1 1 0 1 1 1 1 Isochorismatase family AA_permease_2 PF13520.6 AID31648.1 - 1.2e-34 119.9 46.7 1.5e-34 119.5 46.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 AID31648.1 - 1.4e-23 83.3 43.7 4e-23 81.8 43.8 1.7 1 1 0 1 1 1 1 Amino acid permease Phtf-FEM1B_bdg PF12129.8 AID31648.1 - 2.8 7.8 6.7 6.4 6.6 0.6 2.4 2 0 0 2 2 2 0 Male germ-cell putative homeodomain transcription factor adh_short_C2 PF13561.6 AID31649.1 - 5.5e-58 196.3 3.3 7.2e-58 195.9 3.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31649.1 - 5.8e-51 172.7 1.3 6.8e-51 172.5 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31649.1 - 2.7e-12 47.0 0.8 2.7e-12 47.0 0.8 1.4 2 0 0 2 2 2 1 KR domain 3HCDH_N PF02737.18 AID31649.1 - 0.0017 18.3 0.5 0.0026 17.7 0.5 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID31649.1 - 0.016 15.7 0.3 0.033 14.8 0.3 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.19 AID31649.1 - 0.027 13.8 0.1 0.045 13.1 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NmrA PF05368.13 AID31649.1 - 0.054 13.1 2.4 0.1 12.1 2.4 1.4 1 0 0 1 1 1 0 NmrA-like family DUF1776 PF08643.10 AID31649.1 - 0.16 11.3 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) APH PF01636.23 AID31650.1 - 9.6e-33 114.1 2.3 1.3e-32 113.6 2.3 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 AID31650.1 - 0.00061 19.4 0.0 0.0018 17.9 0.0 1.7 2 0 0 2 2 2 1 Choline/ethanolamine kinase Pkinase PF00069.25 AID31650.1 - 0.0043 16.4 0.1 0.0072 15.7 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.22 AID31650.1 - 0.07 12.7 0.0 0.84 9.2 0.0 2.1 2 0 0 2 2 2 0 RIO1 family Aminotran_3 PF00202.21 AID31651.1 - 3.4e-71 240.1 0.0 4.2e-71 239.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III adh_short_C2 PF13561.6 AID31652.1 - 2.8e-61 207.0 1.8 3.3e-61 206.8 1.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31652.1 - 1e-47 162.1 0.5 1.2e-47 161.9 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31652.1 - 7.2e-07 29.3 2.2 1e-06 28.8 2.2 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31652.1 - 0.014 14.9 1.7 0.2 11.1 1.7 2.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 AID31652.1 - 0.12 12.2 1.0 3.3 7.6 1.2 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AAA_2 PF07724.14 AID31653.1 - 3.4e-39 134.7 0.0 1.3e-38 132.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 AID31653.1 - 5e-28 97.1 0.2 5e-28 97.1 0.2 2.4 3 0 0 3 3 2 1 AAA lid domain AAA PF00004.29 AID31653.1 - 6.5e-20 71.9 0.1 3.4e-09 37.2 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID31653.1 - 1e-12 48.2 0.1 7e-09 35.8 0.0 3.3 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AID31653.1 - 2e-09 38.0 15.3 4.8e-06 27.1 0.0 5.7 5 2 0 6 6 4 2 AAA ATPase domain ClpB_D2-small PF10431.9 AID31653.1 - 2.1e-09 37.3 0.7 5.1e-09 36.1 0.1 2.1 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA_22 PF13401.6 AID31653.1 - 1.7e-08 34.8 1.3 0.06 13.6 0.0 4.9 3 1 1 4 4 4 2 AAA domain AAA_25 PF13481.6 AID31653.1 - 2e-07 30.8 0.6 0.0015 18.2 0.1 3.4 3 0 0 3 3 3 2 AAA domain Sigma54_activat PF00158.26 AID31653.1 - 1.2e-06 28.3 0.0 0.00015 21.5 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_7 PF12775.7 AID31653.1 - 2.6e-06 27.1 0.0 0.055 13.0 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region TniB PF05621.11 AID31653.1 - 6.5e-05 22.4 0.0 0.057 12.8 0.0 3.1 2 1 0 2 2 2 1 Bacterial TniB protein IstB_IS21 PF01695.17 AID31653.1 - 9.9e-05 22.1 0.0 0.2 11.3 0.0 3.2 3 0 0 3 3 3 2 IstB-like ATP binding protein NACHT PF05729.12 AID31653.1 - 0.0002 21.3 0.2 0.018 14.9 0.0 2.8 2 1 0 2 2 2 1 NACHT domain ATPase_2 PF01637.18 AID31653.1 - 0.00038 20.4 0.1 0.53 10.1 0.0 3.5 3 1 0 4 4 4 1 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 AID31653.1 - 0.0021 17.3 0.6 0.14 11.4 0.0 3.3 3 1 1 4 4 3 1 Zeta toxin AAA_18 PF13238.6 AID31653.1 - 0.0025 18.4 0.4 0.16 12.5 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 AID31653.1 - 0.0025 17.9 0.0 0.67 10.0 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_29 PF13555.6 AID31653.1 - 0.0076 16.0 0.1 6.4 6.6 0.1 2.9 3 0 0 3 3 2 0 P-loop containing region of AAA domain TIP49 PF06068.13 AID31653.1 - 0.0091 15.2 1.7 1 8.5 0.1 3.0 2 1 0 3 3 3 1 TIP49 P-loop domain RNA_helicase PF00910.22 AID31653.1 - 0.0093 16.4 0.0 3.6 8.0 0.0 3.0 3 0 0 3 3 3 1 RNA helicase AAA_24 PF13479.6 AID31653.1 - 0.0099 15.6 0.0 0.47 10.1 0.0 2.6 3 0 0 3 3 2 1 AAA domain RuvB_N PF05496.12 AID31653.1 - 0.022 14.5 2.2 2.4 7.9 0.0 3.8 3 1 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain Hpr_kinase_C PF07475.12 AID31653.1 - 0.036 13.6 0.2 0.27 10.7 0.0 2.4 2 0 0 2 2 2 0 HPr Serine kinase C-terminal domain ResIII PF04851.15 AID31653.1 - 0.042 13.9 0.0 20 5.1 0.0 3.2 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit TsaE PF02367.17 AID31653.1 - 0.045 13.8 0.0 5 7.1 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 AID31653.1 - 0.049 13.6 0.0 9.1 6.2 0.0 2.8 2 0 0 2 2 2 0 NTPase DUF815 PF05673.13 AID31653.1 - 0.049 12.8 0.0 3.9 6.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Rad17 PF03215.15 AID31653.1 - 0.075 13.0 0.0 0.55 10.1 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 AID31653.1 - 0.084 12.8 0.0 13 5.7 0.0 2.5 2 0 0 2 2 2 0 RsgA GTPase AAA_19 PF13245.6 AID31653.1 - 0.087 13.1 1.5 12 6.2 0.5 3.3 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID31653.1 - 0.13 12.8 0.0 5.1 7.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain ImpA_N PF06812.12 AID31654.1 - 8.7e-31 106.5 0.5 8.7e-31 106.5 0.5 2.1 2 0 0 2 2 2 1 ImpA, N-terminal, type VI secretion system T6SS_VipA PF05591.12 AID31655.1 - 4.1e-51 172.9 0.3 5e-51 172.6 0.3 1.0 1 0 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 Peripla_BP_2 PF01497.18 AID31655.1 - 0.042 13.4 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein Dimer_Tnp_Tn5 PF02281.16 AID31655.1 - 0.055 13.2 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain VipB PF05943.12 AID31656.1 - 9.2e-173 574.9 0.0 1.1e-172 574.6 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath TssC PF17541.2 AID31656.1 - 0.0018 17.2 1.4 0.0046 15.9 1.6 1.4 2 0 0 2 2 2 1 Type VI secretion system, TssC, VipB Lipoprotein_7 PF01540.16 AID31656.1 - 0.089 12.1 1.1 0.13 11.5 1.1 1.2 1 0 0 1 1 1 0 Adhesin lipoprotein T6SS_HCP PF05638.12 AID31657.1 - 2.1e-29 102.5 0.0 2.6e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp DUF3660 PF12398.8 AID31657.1 - 0.015 15.3 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 Receptor serine/threonine kinase GPW_gp25 PF04965.14 AID31658.1 - 3.1e-27 94.2 0.1 4.9e-27 93.5 0.1 1.3 1 0 0 1 1 1 1 Gene 25-like lysozyme T6SS_TssF PF05947.12 AID31659.1 - 1.6e-171 572.0 0.1 1.8e-171 571.8 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssF T6SS_TssG PF06996.11 AID31660.1 - 9.2e-83 277.9 2.3 1.2e-82 277.5 2.3 1.1 1 0 0 1 1 1 1 Type VI secretion, TssG FHA PF00498.26 AID31661.1 - 4e-12 46.3 0.0 6.4e-12 45.7 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 AID31661.1 - 0.00015 22.0 0.0 0.00026 21.3 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain T6SS-SciN PF12790.7 AID31662.1 - 9.7e-27 93.1 0.0 1.1e-26 92.8 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 T6SS_VasE PF05936.12 AID31663.1 - 3.3e-110 368.7 0.0 3.7e-110 368.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DotU PF09850.9 AID31664.1 - 5e-52 176.6 0.4 8.3e-52 175.9 0.4 1.4 1 0 0 1 1 1 1 Type VI secretion system protein DotU OmpA PF00691.20 AID31664.1 - 2.5e-17 63.0 0.1 5.5e-17 61.9 0.1 1.6 1 0 0 1 1 1 1 OmpA family FTR1 PF03239.14 AID31664.1 - 0.19 10.9 1.1 0.28 10.3 1.1 1.2 1 0 0 1 1 1 0 Iron permease FTR1 family ImcF-related_N PF14331.6 AID31665.1 - 1.1e-84 283.9 1.3 1.7e-84 283.2 0.6 1.7 2 0 0 2 2 2 1 ImcF-related N-terminal domain IcmF-related PF06761.12 AID31665.1 - 1e-59 202.6 0.4 2.1e-59 201.6 0.4 1.5 1 0 0 1 1 1 1 Intracellular multiplication and human macrophage-killing IcmF_C PF06744.12 AID31665.1 - 9.1e-59 198.5 0.0 1.4e-58 197.9 0.0 1.3 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal Fig1 PF12351.8 AID31665.1 - 0.097 12.6 1.1 0.16 11.9 1.1 1.3 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 TagF_N PF09867.9 AID31666.1 - 3.2e-30 104.9 0.2 5.5e-30 104.2 0.2 1.4 1 0 0 1 1 1 1 TagF N-terminal domain, Type VI secretion system-associated DUF2169 PF09937.9 AID31667.1 - 1.3e-90 303.8 0.1 1.5e-90 303.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2169) ketoacyl-synt PF00109.26 AID31668.1 - 0.012 15.3 0.1 0.056 13.0 0.0 2.2 3 0 0 3 3 3 0 Beta-ketoacyl synthase, N-terminal domain DUF4150 PF13665.6 AID31669.1 - 6.1e-31 106.8 4.4 1.3e-30 105.7 4.4 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4150) Ribosomal_L14 PF00238.19 AID31669.1 - 0.059 13.5 0.4 0.059 13.5 0.4 2.0 2 0 0 2 2 2 0 Ribosomal protein L14p/L23e Phage_GPD PF05954.11 AID31673.1 - 7.2e-92 307.9 0.3 1.4e-91 307.0 0.0 1.6 2 0 0 2 2 2 1 Phage late control gene D protein (GPD) Gp5_C PF06715.12 AID31673.1 - 4.4e-07 29.6 50.6 0.00027 20.8 0.8 10.2 4 2 7 14 14 14 7 Gp5 C-terminal repeat (3 copies) DUF2345 PF10106.9 AID31673.1 - 0.036 13.9 21.7 0.02 14.7 10.3 3.6 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2345) FHA PF00498.26 AID31674.1 - 7.9e-17 61.4 0.0 1.2e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 AID31674.1 - 4.5e-05 23.7 0.0 8.7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PP1_bind PF15276.6 AID31674.1 - 7.1 7.0 6.9 25 5.3 0.2 3.5 2 1 2 4 4 4 0 Protein phosphatase 1 binding DotU PF09850.9 AID31675.1 - 1.8e-55 187.8 1.3 2.3e-55 187.5 0.7 1.5 2 0 0 2 2 2 1 Type VI secretion system protein DotU OmpA PF00691.20 AID31675.1 - 2.7e-14 53.3 0.2 6e-14 52.2 0.2 1.6 1 0 0 1 1 1 1 OmpA family DUF3400 PF11880.8 AID31675.1 - 0.15 11.6 0.0 0.34 10.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) PsbJ PF01788.17 AID31675.1 - 0.44 10.4 1.3 0.85 9.5 0.2 2.0 2 0 0 2 2 2 0 PsbJ ImcF-related_N PF14331.6 AID31676.1 - 9.9e-88 293.8 3.1 1.1e-87 293.7 0.2 2.5 2 1 1 3 3 3 1 ImcF-related N-terminal domain IcmF-related PF06761.12 AID31676.1 - 3.3e-68 230.4 2.8 3.3e-68 230.4 2.8 2.9 4 0 0 4 4 4 1 Intracellular multiplication and human macrophage-killing IcmF_C PF06744.12 AID31676.1 - 4.5e-57 193.0 1.1 1.3e-56 191.5 0.4 2.2 2 0 0 2 2 2 1 Type VI secretion protein IcmF C-terminal DUF948 PF06103.11 AID31676.1 - 0.38 11.0 1.3 7.6 6.9 0.1 3.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) CopD PF05425.13 AID31676.1 - 0.49 10.8 10.9 0.77 10.2 3.1 2.6 2 0 0 2 2 2 0 Copper resistance protein D LapA_dom PF06305.11 AID31676.1 - 0.81 9.5 2.6 0.75 9.7 0.1 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Phage_holin_3_6 PF07332.11 AID31676.1 - 1.2 9.2 11.5 0.39 10.8 2.6 2.8 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III PP2C_2 PF13672.6 AID31677.1 - 6.2e-10 39.1 0.6 1.1e-09 38.3 0.6 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C PP2C PF00481.21 AID31677.1 - 3.6e-09 36.6 0.0 1.7e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C SpoIIE PF07228.12 AID31677.1 - 9.3e-08 32.2 2.2 9.8e-07 28.9 2.2 2.0 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DsrH PF04077.12 AID31677.1 - 0.0042 17.2 0.1 0.19 11.8 0.0 2.5 3 0 0 3 3 3 1 DsrH like protein Pkinase PF00069.25 AID31678.1 - 1.5e-43 149.1 0.0 1.9e-43 148.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 AID31678.1 - 2.3e-26 92.7 0.0 3.1e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 AID31678.1 - 6.3e-08 32.8 0.2 0.0013 18.7 0.1 2.5 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 AID31678.1 - 0.0021 17.4 0.0 0.0037 16.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 AID31678.1 - 0.066 12.8 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 RIO1 family DUF1036 PF06282.11 AID31679.1 - 8.4e-34 116.5 0.9 1.1e-33 116.1 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1036) Peptidase_M23 PF01551.22 AID31680.1 - 1.7e-33 114.7 0.5 4.5e-33 113.3 0.5 1.8 1 0 0 1 1 1 1 Peptidase family M23 Transglycosylas PF06737.14 AID31680.1 - 0.034 14.8 0.0 0.11 13.1 0.0 1.9 1 0 0 1 1 1 0 Transglycosylase-like domain DDE_Tnp_ISAZ013 PF07592.11 AID31681.1 - 4e-139 462.8 0.0 4.6e-139 462.6 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain Peptidase_C14 PF00656.22 AID31682.1 - 6.1e-33 114.8 0.0 8.2e-33 114.4 0.0 1.2 1 0 0 1 1 1 1 Caspase domain OmpA PF00691.20 AID31683.1 - 2e-23 82.6 0.0 3e-23 82.0 0.0 1.3 1 0 0 1 1 1 1 OmpA family Peptidase_C14 PF00656.22 AID31685.1 - 2.5e-37 129.2 0.0 3.2e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Caspase domain OmpA PF00691.20 AID31686.1 - 8e-22 77.4 0.0 2e-21 76.1 0.0 1.7 1 0 0 1 1 1 1 OmpA family YceI PF04264.13 AID31686.1 - 8.9e-12 45.8 0.7 1.5e-11 45.1 0.7 1.3 1 0 0 1 1 1 1 YceI-like domain Cytochrome_CBB3 PF13442.6 AID31689.1 - 1.8e-07 31.4 0.1 1.3e-06 28.6 0.1 2.2 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AID31689.1 - 2.1e-06 28.8 0.0 5.7e-06 27.4 0.0 1.7 1 1 0 1 1 1 1 Cytochrome c Cys_rich_CPXG PF14255.6 AID31689.1 - 0.062 13.2 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Cysteine-rich CPXCG AAA_33 PF13671.6 AID31690.1 - 2.2e-16 60.3 0.0 7.9e-16 58.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain APH PF01636.23 AID31690.1 - 7.2e-10 39.2 3.4 7.2e-10 39.2 3.4 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family AAA_18 PF13238.6 AID31690.1 - 4.9e-07 30.4 0.0 2.3e-06 28.2 0.0 2.2 2 1 0 2 2 1 1 AAA domain Zeta_toxin PF06414.12 AID31690.1 - 8.2e-05 22.0 0.0 0.00014 21.2 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 AID31690.1 - 0.01 16.3 0.5 0.037 14.4 0.1 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 AID31690.1 - 0.016 15.7 0.0 0.029 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID31690.1 - 0.017 15.0 0.2 0.067 13.1 0.0 2.0 2 1 0 2 2 2 0 Adenylylsulphate kinase PRK PF00485.18 AID31690.1 - 0.055 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ABC_tran PF00005.27 AID31690.1 - 0.07 13.6 0.0 0.17 12.4 0.0 1.7 2 0 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 AID31690.1 - 0.11 12.7 0.2 0.35 11.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain Cytidylate_kin2 PF13189.6 AID31690.1 - 0.13 12.4 0.9 0.56 10.3 0.2 2.3 2 1 0 2 2 2 0 Cytidylate kinase-like family AAA_17 PF13207.6 AID31690.1 - 0.16 12.4 0.0 0.46 10.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain CPT PF07931.12 AID31690.1 - 0.29 11.0 2.0 2.1 8.2 0.9 2.9 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein ATP-grasp_5 PF13549.6 AID31691.1 - 1.8e-71 240.2 2.7 2.7e-71 239.6 2.7 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 AID31691.1 - 3e-57 192.3 4.9 5.6e-57 191.4 0.4 3.0 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 AID31691.1 - 3.2e-21 76.0 0.3 3.2e-21 76.0 0.3 2.8 3 1 1 4 4 4 1 CoA binding domain CoA_binding PF02629.19 AID31691.1 - 2.6e-09 37.6 0.3 2.6e-09 37.6 0.3 2.8 3 0 0 3 3 3 1 CoA binding domain Acetyltransf_1 PF00583.25 AID31691.1 - 4.2e-07 30.2 0.0 1.3e-06 28.6 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 AID31691.1 - 3.7e-06 27.7 0.0 9.9e-06 26.3 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain ATP-grasp_2 PF08442.10 AID31691.1 - 0.0018 17.8 0.0 0.003 17.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Acetyltransf_10 PF13673.7 AID31691.1 - 0.002 18.0 0.0 0.004 17.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID31691.1 - 0.0022 18.1 0.0 0.0039 17.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF302 PF03625.14 AID31692.1 - 6.9e-12 45.1 0.0 1.1e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 E1-E2_ATPase PF00122.20 AID31693.1 - 9.4e-34 116.5 0.2 9.4e-34 116.5 0.2 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 AID31693.1 - 1.1e-26 94.4 2.4 1.1e-26 94.4 2.4 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID31693.1 - 0.039 13.7 0.2 0.059 13.1 0.2 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID31693.1 - 0.11 12.8 1.7 1.3 9.4 0.3 3.1 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase Thioredoxin PF00085.20 AID31694.1 - 5.9e-27 93.7 0.2 9.4e-27 93.0 0.0 1.4 2 0 0 2 2 1 1 Thioredoxin Thioredoxin_2 PF13098.6 AID31694.1 - 9.5e-08 32.5 0.0 1.1e-06 29.1 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 AID31694.1 - 1.3e-05 25.4 0.0 0.0014 18.9 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like AhpC-TSA PF00578.21 AID31694.1 - 4.2e-05 23.5 0.0 5.1e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_7 PF13899.6 AID31694.1 - 0.00049 20.2 0.7 0.001 19.2 0.0 1.9 3 0 0 3 3 3 1 Thioredoxin-like TraF PF13728.6 AID31694.1 - 0.00081 19.3 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Redoxin PF08534.10 AID31694.1 - 0.0042 16.8 0.0 0.0057 16.4 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_9 PF14595.6 AID31694.1 - 0.027 14.2 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin OST3_OST6 PF04756.13 AID31694.1 - 0.03 13.7 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family zinc_ribbon_4 PF13717.6 AID31694.1 - 0.068 13.1 3.1 0.19 11.7 3.1 1.8 1 1 0 1 1 1 0 zinc-ribbon domain DSBA PF01323.20 AID31694.1 - 0.12 12.1 0.0 0.59 9.9 0.0 1.8 1 1 1 2 2 2 0 DSBA-like thioredoxin domain zf-ACC PF17848.1 AID31694.1 - 0.18 11.9 4.3 4.9 7.3 0.1 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Thioredoxin_6 PF13848.6 AID31694.1 - 0.25 11.2 0.0 0.34 10.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain TF_Zn_Ribbon PF08271.12 AID31694.1 - 5 6.7 6.9 5.6 6.6 1.5 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding Flavodoxin_2 PF02525.17 AID31696.1 - 4.5e-34 117.9 0.0 5.4e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 AID31696.1 - 2.2e-11 43.8 0.0 2.7e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase ADH_N PF08240.12 AID31698.1 - 6.6e-31 106.4 0.1 1.1e-30 105.8 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 AID31698.1 - 3.1e-05 25.0 0.0 7.3e-05 23.8 0.0 1.7 1 1 1 2 2 2 1 Zinc-binding dehydrogenase TC1 PF15063.6 AID31698.1 - 0.043 13.7 0.2 0.083 12.8 0.2 1.4 1 0 0 1 1 1 0 Thyroid cancer protein 1 HTH_Crp_2 PF13545.6 AID31699.1 - 4.1e-21 74.7 2.0 1.3e-20 73.2 0.9 2.1 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 AID31699.1 - 4.4e-19 67.8 0.1 1.4e-18 66.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family cNMP_binding PF00027.29 AID31699.1 - 1e-09 38.3 0.1 1.7e-09 37.6 0.1 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LexA_DNA_bind PF01726.16 AID31699.1 - 0.0031 17.3 0.0 0.23 11.3 0.0 2.3 2 0 0 2 2 2 1 LexA DNA binding domain MarR_2 PF12802.7 AID31699.1 - 0.0055 16.6 0.1 0.012 15.5 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 AID31699.1 - 0.01 15.7 0.1 0.071 13.1 0.1 2.2 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 AID31699.1 - 0.013 15.0 0.0 0.027 14.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 AID31699.1 - 0.037 13.8 0.0 0.1 12.4 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain MarR PF01047.22 AID31699.1 - 0.037 13.9 0.0 0.083 12.8 0.0 1.5 1 0 0 1 1 1 0 MarR family Acetyltransf_3 PF13302.7 AID31700.1 - 4.9e-07 30.5 0.0 6e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID31700.1 - 2.6e-05 24.4 0.0 3.3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 AID31700.1 - 4e-05 23.8 0.0 5.7e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID31700.1 - 0.0025 17.7 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetate_kinase PF00871.17 AID31701.1 - 1.1e-91 307.5 0.0 1.4e-91 307.1 0.0 1.1 1 0 0 1 1 1 1 Acetokinase family XFP_N PF09364.10 AID31702.1 - 4.9e-189 627.7 0.0 6.2e-189 627.4 0.0 1.1 1 0 0 1 1 1 1 XFP N-terminal domain XFP_C PF09363.10 AID31702.1 - 4.5e-92 307.1 0.0 8.3e-92 306.2 0.0 1.4 1 0 0 1 1 1 1 XFP C-terminal domain XFP PF03894.15 AID31702.1 - 2.3e-86 288.0 0.0 3.4e-86 287.5 0.0 1.2 1 0 0 1 1 1 1 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase TPP_enzyme_C PF02775.21 AID31702.1 - 0.0092 15.8 0.3 0.028 14.2 0.3 1.8 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FixS PF03597.15 AID31704.1 - 1.4e-11 43.9 0.0 1.6e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome oxidase maturation protein cbb3-type CBS PF00571.28 AID31705.1 - 1.3e-29 102.4 3.6 3.5e-14 53.0 0.1 2.3 2 0 0 2 2 2 2 CBS domain BON PF04972.17 AID31705.1 - 5.4e-13 49.1 1.4 9.4e-13 48.3 1.4 1.4 1 0 0 1 1 1 1 BON domain LysE PF01810.18 AID31706.1 - 2e-06 27.4 8.5 5.3e-05 22.8 8.5 2.7 1 1 0 1 1 1 1 LysE type translocator RseC_MucC PF04246.12 AID31708.1 - 0.098 12.6 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC VIT1 PF01988.19 AID31709.1 - 0.001 19.0 3.5 0.0012 18.8 3.5 1.0 1 0 0 1 1 1 1 VIT family DUF2231 PF09990.9 AID31711.1 - 0.00037 20.9 6.0 0.00037 20.9 6.0 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2231) E1-E2_ATPase PF00122.20 AID31712.1 - 1.7e-45 154.8 2.2 1.7e-45 154.8 2.2 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 AID31712.1 - 1e-18 68.4 0.8 1.8e-18 67.6 0.2 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 AID31712.1 - 3.3e-15 56.3 7.9 3.3e-15 56.3 7.9 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 AID31712.1 - 5e-06 26.5 0.0 1e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HAD PF12710.7 AID31712.1 - 2.3e-05 24.9 0.1 5.2e-05 23.7 0.1 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID31712.1 - 0.014 15.2 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Usp PF00582.26 AID31713.1 - 9.1e-11 42.4 7.3 3.1e-07 31.0 1.7 3.4 2 2 0 2 2 2 2 Universal stress protein family HATPase_c PF02518.26 AID31714.1 - 3.6e-23 82.2 0.0 1.1e-22 80.7 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 AID31714.1 - 5.6e-21 74.7 0.0 5.9e-16 58.5 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 AID31714.1 - 4.6e-19 68.7 1.0 2.1e-08 34.4 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.7 AID31714.1 - 6.5e-18 64.9 0.0 2.7e-12 46.9 0.0 2.6 2 0 0 2 2 2 2 PAS domain HisKA PF00512.25 AID31714.1 - 2.1e-09 37.3 1.0 2.1e-09 37.3 1.0 3.2 4 1 0 4 4 4 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 AID31714.1 - 7.5e-07 29.0 0.0 0.00014 21.8 0.0 2.8 2 0 0 2 2 2 1 PAS domain HATPase_c_5 PF14501.6 AID31714.1 - 2.5e-05 24.1 0.0 5.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 GHKL domain PAS_10 PF13596.6 AID31714.1 - 0.044 14.4 0.0 5.1 7.7 0.0 2.8 2 0 0 2 2 2 0 PAS domain Response_reg PF00072.24 AID31715.1 - 6.9e-27 93.8 0.1 9.8e-27 93.4 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 AID31715.1 - 1.9e-22 78.6 0.0 2.7e-22 78.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID31715.1 - 9.9e-06 25.1 0.0 1.7e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 FleQ PF06490.11 AID31715.1 - 0.0016 18.8 0.0 0.0023 18.3 0.0 1.2 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ Sigma70_r4 PF04545.16 AID31715.1 - 0.031 13.8 0.0 0.12 12.0 0.0 2.0 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 AID31715.1 - 0.084 12.7 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Aminotran_1_2 PF00155.21 AID31716.1 - 5.6e-73 246.2 0.0 6.4e-73 246.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 AID31716.1 - 2.1e-06 26.5 0.0 3e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID31716.1 - 2.9e-06 26.5 0.0 4.5e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AID31716.1 - 6.1e-05 22.4 0.2 0.00013 21.3 0.0 1.5 2 0 0 2 2 2 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AID31716.1 - 0.053 12.8 0.0 0.099 11.9 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DUF2267 PF10025.9 AID31717.1 - 8.8e-28 97.0 0.0 1e-27 96.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2267) HU-CCDC81_euk_2 PF18289.1 AID31717.1 - 0.088 13.0 0.0 12 6.2 0.0 2.2 2 0 0 2 2 2 0 CCDC81 eukaryotic HU domain 2 BTG PF07742.12 AID31717.1 - 0.091 12.6 0.0 0.49 10.3 0.0 2.0 1 1 1 2 2 2 0 BTG family Zn_ribbon_2 PF12674.7 AID31717.1 - 0.18 12.5 0.0 24 5.7 0.1 2.2 2 0 0 2 2 2 0 Putative zinc ribbon domain Pribosyltran PF00156.27 AID31718.1 - 5.2e-26 91.1 0.1 8e-26 90.5 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID31718.1 - 1.1e-05 25.0 0.2 2.1e-05 24.1 0.0 1.5 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 AID31718.1 - 0.0011 18.5 0.0 0.0018 17.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase PALP PF00291.25 AID31718.1 - 0.03 13.7 0.1 0.042 13.3 0.1 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Pyridox_ox_2 PF12900.7 AID31719.1 - 1.2e-15 57.8 0.0 1.5e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 AID31719.1 - 2.9e-06 27.4 0.0 4.5e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF4010 PF13194.6 AID31720.1 - 2e-43 148.6 32.3 2e-43 148.6 32.3 3.3 3 1 1 4 4 4 1 Domain of unknown function (DUF4010) MgtC PF02308.16 AID31720.1 - 2.7e-15 56.8 11.7 2.7e-15 56.8 11.7 3.3 3 1 0 3 3 3 1 MgtC family AA_permease_2 PF13520.6 AID31721.1 - 1.6e-69 234.8 50.2 1.7e-69 234.7 49.7 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 AID31721.1 - 1.7e-12 46.7 48.0 2.8e-12 46.0 48.0 1.3 1 0 0 1 1 1 1 Amino acid permease Amidinotransf PF02274.17 AID31722.1 - 2e-95 319.7 0.0 2.3e-95 319.6 0.0 1.0 1 0 0 1 1 1 1 Amidinotransferase OTCace PF00185.24 AID31723.1 - 1.1e-51 175.0 0.0 2e-51 174.2 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 AID31723.1 - 7.3e-45 152.6 0.0 1e-44 152.1 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA_kinase PF00696.28 AID31724.1 - 3.2e-31 108.8 0.1 4.5e-31 108.3 0.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family Cytochrome_CBB3 PF13442.6 AID31728.1 - 0.084 13.2 0.0 0.088 13.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AID31728.1 - 0.097 13.8 0.0 0.097 13.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c Phasin_2 PF09361.10 AID31729.1 - 0.021 15.1 0.6 0.031 14.5 0.6 1.3 1 0 0 1 1 1 0 Phasin protein Blt1_C PF17183.4 AID31729.1 - 0.34 10.6 4.0 0.69 9.6 4.0 1.5 1 0 0 1 1 1 0 Get5 carboxyl domain Flavin_Reduct PF01613.18 AID31731.1 - 4.9e-23 81.9 0.1 6.4e-23 81.5 0.1 1.1 1 0 0 1 1 1 1 Flavin reductase like domain Usp PF00582.26 AID31732.1 - 9.1e-08 32.7 4.7 0.0015 19.1 2.1 3.0 2 1 0 2 2 2 2 Universal stress protein family Host_attach PF10116.9 AID31733.1 - 5.1e-17 62.8 0.1 5.4e-17 62.7 0.1 1.0 1 0 0 1 1 1 1 Protein required for attachment to host cells baeRF_family12 PF18856.1 AID31733.1 - 6.7e-16 59.1 0.1 7.2e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 baeRF_family10 PF18854.1 AID31733.1 - 0.046 14.0 0.3 0.046 14.0 0.3 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family12 PF18856.1 AID31734.1 - 0.00025 21.7 0.0 0.00026 21.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 Host_attach PF10116.9 AID31734.1 - 0.0024 18.4 0.0 0.0026 18.3 0.0 1.1 1 0 0 1 1 1 1 Protein required for attachment to host cells DUF2381 PF09544.10 AID31735.1 - 0.033 13.7 0.5 0.035 13.7 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2381) BON PF04972.17 AID31737.1 - 2.7e-32 110.9 10.8 1.7e-15 57.0 0.2 2.7 2 1 0 2 2 2 2 BON domain Yop-YscD_ppl PF16693.5 AID31737.1 - 0.039 13.4 0.8 0.23 10.9 0.1 1.9 1 1 1 2 2 2 0 Inner membrane component of T3SS, periplasmic domain Nramp PF01566.18 AID31739.1 - 1.4e-86 290.7 22.7 1.7e-86 290.4 22.7 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein HHH_8 PF14716.6 AID31740.1 - 5.5e-17 61.9 0.1 1.6e-12 47.6 0.0 3.5 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_5 PF14520.6 AID31740.1 - 1.2e-05 25.8 0.0 3.4e-05 24.4 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain DUF3188 PF11384.8 AID31740.1 - 0.0029 17.3 0.1 0.0063 16.2 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3188) HHH_2 PF12826.7 AID31740.1 - 0.0043 17.1 0.1 0.03 14.4 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 AID31740.1 - 0.0057 16.5 0.0 0.015 15.1 0.0 1.7 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda DUF3775 PF12616.8 AID31741.1 - 4.3e-26 90.7 0.2 6.2e-26 90.2 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3775) HSP20 PF00011.21 AID31742.1 - 1.1e-28 99.4 2.6 1.4e-28 99.0 2.6 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID31742.1 - 2.6e-12 46.1 0.0 4.7e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA FKBP26_C PF18046.1 AID31742.1 - 0.0042 17.1 1.7 0.65 10.1 0.1 2.3 2 0 0 2 2 2 2 FKBP26_C-terminal CS PF04969.16 AID31742.1 - 0.011 16.8 1.1 0.24 12.5 0.1 2.3 2 0 0 2 2 2 0 CS domain HMA PF00403.26 AID31742.1 - 0.014 15.8 0.9 0.17 12.4 0.1 2.2 2 0 0 2 2 2 0 Heavy-metal-associated domain LTXXQ PF07813.12 AID31746.1 - 2.4e-19 70.0 1.8 3e-19 69.6 1.8 1.1 1 0 0 1 1 1 1 LTXXQ motif family protein Borrelia_REV PF03978.13 AID31746.1 - 0.11 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein ABC_tran PF00005.27 AID31748.1 - 5.8e-34 117.5 0.0 8.2e-34 117.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 AID31748.1 - 3.8e-05 23.7 0.0 7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 AID31748.1 - 0.00032 20.6 0.1 0.00055 19.8 0.1 1.4 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID31748.1 - 0.00042 20.0 0.1 0.0008 19.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID31748.1 - 0.00049 19.6 0.1 0.47 9.9 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID31748.1 - 0.0031 17.9 0.1 0.0051 17.2 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID31748.1 - 0.011 16.3 0.0 0.02 15.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID31748.1 - 0.043 13.9 0.1 0.074 13.1 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 AID31748.1 - 0.043 14.1 0.1 0.07 13.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID31748.1 - 0.06 13.1 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID31748.1 - 0.07 12.7 0.1 0.26 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 AID31748.1 - 0.11 11.8 0.0 0.39 10.0 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family FtsX PF02687.21 AID31749.1 - 5.2e-14 52.5 13.9 1.1e-08 35.4 1.8 5.0 6 0 0 6 6 6 3 FtsX-like permease family HlyD_3 PF13437.6 AID31750.1 - 6.8e-11 42.8 1.9 2.6e-08 34.5 0.1 2.7 2 1 1 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID31750.1 - 3.4e-08 33.0 0.5 5.7e-05 22.4 0.1 2.5 2 1 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID31750.1 - 0.0059 16.4 3.1 2.5 8.0 0.0 3.3 3 0 0 3 3 3 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID31750.1 - 0.011 15.5 0.2 11 5.9 0.0 3.1 3 0 0 3 3 3 0 Biotin-requiring enzyme Prot_ATP_ID_OB PF16450.5 AID31750.1 - 0.16 12.0 0.7 26 4.8 0.1 2.6 2 0 0 2 2 2 0 Proteasomal ATPase OB C-terminal domain Usp PF00582.26 AID31751.1 - 3.8e-09 37.2 7.0 1e-07 32.5 1.4 3.2 2 2 0 2 2 2 2 Universal stress protein family Cytochrome_CBB3 PF13442.6 AID31752.1 - 3.5e-07 30.4 0.0 1.1e-06 28.9 0.0 1.9 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AID31752.1 - 3.5e-05 24.8 0.0 7.6e-05 23.8 0.0 1.6 1 1 0 1 1 1 1 Cytochrome c HTH_Crp_2 PF13545.6 AID31753.1 - 8e-20 70.6 1.0 2.8e-19 68.8 0.4 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 AID31753.1 - 5.7e-18 64.3 0.0 1.4e-17 63.0 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family cNMP_binding PF00027.29 AID31753.1 - 8.2e-11 41.8 0.1 1.4e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LexA_DNA_bind PF01726.16 AID31753.1 - 0.0021 17.8 0.1 0.074 12.8 0.1 2.5 1 1 1 2 2 2 1 LexA DNA binding domain MarR PF01047.22 AID31753.1 - 0.0082 16.1 0.0 0.018 14.9 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID31753.1 - 0.013 15.3 0.1 0.027 14.3 0.1 1.6 1 1 0 1 1 1 0 MarR family HTH_24 PF13412.6 AID31753.1 - 0.022 14.3 0.0 0.047 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 AID31753.1 - 0.056 13.3 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 AID31753.1 - 0.073 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_11 PF08279.12 AID31753.1 - 0.084 12.8 0.1 0.53 10.3 0.0 2.1 2 0 0 2 2 2 0 HTH domain Acetyltransf_3 PF13302.7 AID31754.1 - 9.5e-07 29.6 0.1 1.1e-06 29.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID31754.1 - 2.7e-05 24.3 0.0 3.3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID31754.1 - 2.9e-05 24.3 0.0 3.5e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID31754.1 - 0.00018 21.4 0.0 0.00024 21.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetate_kinase PF00871.17 AID31755.1 - 1.1e-16 60.5 0.0 1.3e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 Acetokinase family ADH_zinc_N_2 PF13602.6 AID31756.1 - 2.7e-23 83.5 0.1 5.7e-23 82.4 0.1 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 AID31756.1 - 7.9e-12 45.3 0.1 1.4e-11 44.5 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID31756.1 - 6.1e-09 35.7 0.0 2.3e-08 33.9 0.0 1.7 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 AID31756.1 - 0.0033 17.3 0.4 0.035 14.0 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of oxidoreductase OAM_alpha PF16552.5 AID31756.1 - 0.24 11.3 0.7 2.9 7.8 0.1 2.3 2 0 0 2 2 2 0 D-ornithine 4,5-aminomutase alpha-subunit LysR_substrate PF03466.20 AID31757.1 - 1.8e-45 154.9 6.2 2e-45 154.7 6.2 1.0 1 0 0 1 1 1 1 LysR substrate binding domain HNH_4 PF13395.6 AID31758.1 - 0.16 11.9 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 HNH endonuclease BTAD PF03704.17 AID31759.1 - 5.6e-24 85.2 5.4 1.4e-23 84.0 5.4 1.7 1 0 0 1 1 1 1 Bacterial transcriptional activator domain Abhydrolase_1 PF00561.20 AID31759.1 - 6.7e-11 42.3 0.0 4.2e-10 39.7 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID31759.1 - 8.7e-11 41.5 0.0 1.5e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Trans_reg_C PF00486.28 AID31759.1 - 1.1e-06 28.6 0.1 1.6e-05 24.9 0.0 2.6 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Ndr PF03096.14 AID31759.1 - 2e-05 23.4 0.0 3.8e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Ndr family Abhydrolase_4 PF08386.10 AID31759.1 - 0.033 14.3 0.0 0.075 13.1 0.0 1.6 1 0 0 1 1 1 0 TAP-like protein Esterase PF00756.20 AID31759.1 - 0.095 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative esterase TPR_12 PF13424.6 AID31759.1 - 0.3 11.4 3.8 1 9.7 0.7 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat Transposase_mut PF00872.18 AID31760.1 - 1.1e-60 205.5 0.0 1.4e-60 205.2 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 AID31760.1 - 1e-05 25.8 0.0 2.2e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.6 AID31760.1 - 0.073 13.3 0.0 0.54 10.5 0.0 2.1 1 1 1 2 2 2 0 DDE domain DUF2147 PF09917.9 AID31761.1 - 7e-14 52.4 0.2 2.2e-13 50.8 0.2 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2147) FAD_binding_7 PF03441.14 AID31762.1 - 8e-88 293.2 0.6 1.1e-87 292.8 0.6 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 AID31762.1 - 1e-44 152.4 0.0 1.9e-44 151.6 0.0 1.4 1 0 0 1 1 1 1 DNA photolyase DUF2177 PF09945.9 AID31763.1 - 7.9e-42 142.3 12.5 9e-42 142.1 12.5 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2177) DUF2530 PF10745.9 AID31763.1 - 0.068 13.4 0.1 0.068 13.4 0.1 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2530) OATP PF03137.20 AID31764.1 - 0.15 10.3 0.2 0.21 9.9 0.2 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family ABC2_membrane_5 PF13346.6 AID31764.1 - 0.82 9.2 3.4 0.49 9.9 0.4 1.9 1 1 1 2 2 2 0 ABC-2 family transporter protein CMAS PF02353.20 AID31765.1 - 4.3e-43 147.6 0.0 5.5e-43 147.2 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 AID31765.1 - 9.1e-16 58.1 0.1 1.7e-15 57.2 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID31765.1 - 6.6e-14 52.4 0.0 1.5e-13 51.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31765.1 - 1e-12 48.5 0.0 2.4e-12 47.3 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID31765.1 - 4.1e-11 43.5 0.0 7.5e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID31765.1 - 3.3e-09 36.7 0.0 5.6e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID31765.1 - 4e-07 29.7 0.0 7.9e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 AID31765.1 - 1.8e-06 27.6 0.0 2.7e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase PCMT PF01135.19 AID31765.1 - 0.00046 20.0 0.0 0.00064 19.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF938 PF06080.12 AID31765.1 - 0.0013 18.6 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF938) NodS PF05401.11 AID31765.1 - 0.0016 18.1 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltr_RsmB-F PF01189.17 AID31765.1 - 0.0029 17.3 0.0 0.0048 16.6 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F RrnaAD PF00398.20 AID31765.1 - 0.016 14.3 0.0 0.023 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase TehB PF03848.14 AID31765.1 - 0.037 13.4 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 AID31765.1 - 0.077 12.3 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family tRNA_U5-meth_tr PF05958.11 AID31765.1 - 0.087 11.8 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase FtsJ PF01728.19 AID31765.1 - 0.13 12.4 0.0 0.31 11.1 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase DUF1295 PF06966.12 AID31766.1 - 8.8e-83 277.4 1.9 1.1e-82 277.2 1.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 AID31766.1 - 1.5e-07 31.5 0.0 3.7e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 AID31766.1 - 0.08 13.3 0.2 0.08 13.3 0.2 2.4 2 0 0 2 2 2 0 Phospholipid methyltransferase ICMT PF04140.14 AID31766.1 - 0.11 12.9 1.3 0.24 11.8 0.0 2.2 2 0 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TauE PF01925.19 AID31766.1 - 1.2 8.7 17.4 2.6 7.6 14.1 2.7 2 1 0 2 2 2 0 Sulfite exporter TauE/SafE Cupin_7 PF12973.7 AID31767.1 - 1.3e-12 47.4 0.0 2.1e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 ChrR Cupin-like domain Sigma70_r2 PF04542.14 AID31768.1 - 3.8e-18 65.0 0.1 7.1e-18 64.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID31768.1 - 1.3e-13 50.2 0.0 2.1e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 AID31768.1 - 2e-12 46.6 0.0 3.6e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 AID31768.1 - 0.00024 20.6 0.8 0.0008 18.9 0.0 2.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Amino_oxidase PF01593.24 AID31769.1 - 7.3e-18 65.1 1.4 1.9e-16 60.4 1.4 2.5 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 AID31769.1 - 1.5e-15 57.1 0.1 1.5e-15 57.1 0.1 2.3 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID31769.1 - 2.5e-07 30.6 5.4 5.7e-07 29.4 3.1 2.5 2 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID31769.1 - 0.00012 21.4 0.0 0.00027 20.3 0.0 1.5 2 0 0 2 2 2 1 Thi4 family NAD_binding_9 PF13454.6 AID31769.1 - 0.0087 16.1 0.2 3.1 7.8 0.0 2.8 3 1 0 3 3 3 2 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 AID31769.1 - 0.017 14.2 1.1 0.038 13.1 0.2 1.9 2 0 0 2 2 2 0 FAD binding domain Caps_synth_GfcC PF06251.11 AID31769.1 - 0.022 14.4 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Capsule biosynthesis GfcC Pyr_redox_2 PF07992.14 AID31769.1 - 0.12 11.6 0.0 0.27 10.4 0.0 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF1365 PF07103.11 AID31770.1 - 3.7e-70 236.3 0.0 4.3e-70 236.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1365) HisKA_2 PF07568.12 AID31772.1 - 1.1e-18 67.0 0.5 2.2e-18 66.1 0.5 1.5 1 0 0 1 1 1 1 Histidine kinase HWE_HK PF07536.14 AID31772.1 - 1.1e-08 35.6 0.3 2.9e-08 34.3 0.3 1.7 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 AID31772.1 - 2.2e-08 34.1 0.0 7.1e-08 32.5 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.26 AID31772.1 - 4.2e-08 33.7 0.1 6.6e-07 29.8 0.1 2.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 AID31772.1 - 1.8e-05 24.6 0.0 5.6e-05 23.1 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 AID31772.1 - 0.00035 20.6 0.0 0.00067 19.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID31772.1 - 0.00091 19.4 0.0 0.0019 18.4 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 AID31772.1 - 0.0018 18.5 0.0 0.0047 17.2 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 AID31772.1 - 0.0018 18.5 0.0 0.0036 17.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.14 AID31773.1 - 1e-27 96.7 0.4 2.5e-27 95.4 0.2 1.8 2 0 0 2 2 2 1 HWE histidine kinase HisKA_2 PF07568.12 AID31773.1 - 3.1e-07 30.4 1.4 3.6e-07 30.2 0.2 1.8 2 0 0 2 2 2 1 Histidine kinase ATPase PF06745.13 AID31774.1 - 2.3e-62 210.4 0.0 4.6e-33 114.5 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_25 PF13481.6 AID31774.1 - 1.8e-16 60.3 0.0 7.7e-10 38.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 AID31774.1 - 1e-08 35.8 0.6 0.00043 20.7 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain IstB_IS21 PF01695.17 AID31774.1 - 1.4e-07 31.4 2.4 0.00028 20.7 0.1 3.3 4 0 0 4 4 3 2 IstB-like ATP binding protein GvpD PF07088.11 AID31774.1 - 1.5e-07 30.4 0.0 2.5e-06 26.4 0.0 2.3 2 0 0 2 2 2 1 GvpD gas vesicle protein AAA_22 PF13401.6 AID31774.1 - 2.1e-07 31.3 0.1 0.00038 20.7 0.1 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 AID31774.1 - 1.8e-06 27.8 0.0 0.002 17.9 0.0 2.5 2 1 0 2 2 2 2 AAA domain RecA PF00154.21 AID31774.1 - 2.6e-06 27.1 0.1 0.0049 16.4 0.0 2.4 2 0 0 2 2 2 2 recA bacterial DNA recombination protein ABC_tran PF00005.27 AID31774.1 - 3.8e-06 27.4 1.3 0.059 13.9 0.2 3.1 3 2 0 3 3 2 2 ABC transporter AAA PF00004.29 AID31774.1 - 2.8e-05 24.5 0.0 0.01 16.2 0.0 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID31774.1 - 5.3e-05 22.9 3.4 0.0089 15.7 0.5 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_5 PF07728.14 AID31774.1 - 0.00013 22.0 0.3 0.05 13.6 0.0 3.1 4 0 0 4 4 4 1 AAA domain (dynein-related subfamily) DnaB_C PF03796.15 AID31774.1 - 0.00013 21.4 0.0 0.81 9.0 0.0 3.3 3 0 0 3 3 3 1 DnaB-like helicase C terminal domain Rad51 PF08423.11 AID31774.1 - 0.00016 21.0 0.3 0.059 12.6 0.1 2.7 3 0 0 3 3 3 1 Rad51 CbiA PF01656.23 AID31774.1 - 0.00027 21.0 0.3 0.0041 17.2 0.0 2.4 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_7 PF12775.7 AID31774.1 - 0.001 18.6 0.0 0.12 11.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_14 PF13173.6 AID31774.1 - 0.0015 18.5 0.0 2.3 8.3 0.0 2.7 2 1 0 2 2 2 2 AAA domain AAA_33 PF13671.6 AID31774.1 - 0.0019 18.4 0.1 1.5 9.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 AID31774.1 - 0.0027 17.7 3.0 1.4 8.8 0.9 2.9 2 2 0 2 2 2 2 NACHT domain TniB PF05621.11 AID31774.1 - 0.0037 16.7 0.9 0.22 10.9 0.1 3.3 3 1 0 3 3 3 1 Bacterial TniB protein DUF2075 PF09848.9 AID31774.1 - 0.004 16.4 0.0 0.018 14.3 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 AID31774.1 - 0.0042 16.8 0.0 3 7.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 AID31774.1 - 0.0062 15.8 0.1 0.058 12.6 0.0 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MEDS PF14417.6 AID31774.1 - 0.0086 15.9 0.0 3.4 7.5 0.0 2.4 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain RNA_helicase PF00910.22 AID31774.1 - 0.015 15.7 0.1 1.2 9.6 0.0 2.8 3 0 0 3 3 3 0 RNA helicase DAP3 PF10236.9 AID31774.1 - 0.015 14.4 0.0 2.9 7.0 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 RsgA_GTPase PF03193.16 AID31774.1 - 0.02 14.8 0.7 0.048 13.6 0.1 1.9 2 0 0 2 2 1 0 RsgA GTPase T2SSE PF00437.20 AID31774.1 - 0.025 13.6 0.3 23 4.0 0.1 3.0 3 0 0 3 3 3 0 Type II/IV secretion system protein AAA_18 PF13238.6 AID31774.1 - 0.03 14.9 4.6 2.6 8.6 0.3 2.9 2 2 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 AID31774.1 - 0.031 13.9 0.1 13 5.4 0.1 2.4 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain APS_kinase PF01583.20 AID31774.1 - 0.043 13.7 0.1 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase zf-C2H2_10 PF16588.5 AID31774.1 - 0.047 13.4 0.8 0.072 12.8 0.8 1.3 1 0 0 1 1 1 0 C2H2 zinc-finger cobW PF02492.19 AID31774.1 - 0.076 12.6 1.2 9.2 5.8 0.1 2.8 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 AID31774.1 - 0.079 13.2 0.0 2.8 8.2 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Sigma54_activat PF00158.26 AID31774.1 - 0.089 12.5 0.1 0.65 9.7 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF835 PF05763.12 AID31774.1 - 0.089 12.5 0.1 2.7 7.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF835) NB-ARC PF00931.22 AID31774.1 - 0.11 11.6 1.6 14 4.8 0.1 2.9 3 0 0 3 3 3 0 NB-ARC domain NTPase_1 PF03266.15 AID31774.1 - 0.12 12.3 0.2 23 4.8 0.0 2.6 3 0 0 3 3 2 0 NTPase PhoH PF02562.16 AID31774.1 - 0.16 11.4 0.1 3.1 7.2 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein Zot PF05707.12 AID31774.1 - 0.19 11.4 0.0 4.3 6.9 0.0 2.3 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) PAXNEB PF05625.11 AID31774.1 - 0.29 10.2 0.9 5.1 6.1 0.1 2.1 2 0 0 2 2 2 0 PAXNEB protein PAP2 PF01569.21 AID31775.1 - 7.9e-21 74.2 9.3 7.9e-21 74.2 9.3 1.8 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 AID31775.1 - 9.7e-07 28.7 15.1 1.2e-05 25.1 14.7 2.3 1 1 0 1 1 1 1 PAP2 superfamily YrhC PF14143.6 AID31775.1 - 0.012 15.7 1.1 0.012 15.7 1.1 2.0 2 0 0 2 2 2 0 YrhC-like protein PAP2_C PF14360.6 AID31775.1 - 0.012 16.1 3.4 0.012 16.1 3.4 2.0 2 0 0 2 2 2 0 PAP2 superfamily C-terminal DUF1772 PF08592.11 AID31775.1 - 0.14 12.5 11.6 0.47 10.8 2.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) DUF3270 PF11674.8 AID31775.1 - 0.84 9.9 6.1 1.2 9.4 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) DAGK_cat PF00781.24 AID31776.1 - 4.2e-22 78.1 1.0 6.2e-22 77.6 1.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 AID31776.1 - 0.05 12.8 0.4 0.074 12.2 0.4 1.3 1 0 0 1 1 1 0 ATP-NAD kinase Metallophos PF00149.28 AID31778.1 - 5.7e-05 23.7 0.0 7.1e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PLDc_2 PF13091.6 AID31779.1 - 6e-41 139.4 0.0 1.2e-22 80.2 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 AID31779.1 - 1.7e-09 37.4 0.3 0.00012 22.1 0.0 2.5 2 0 0 2 2 2 2 Phospholipase D Active site motif Iron_permease PF04120.12 AID31780.1 - 5e-08 32.8 0.0 5.3e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Low affinity iron permease Phage_holin_3_6 PF07332.11 AID31780.1 - 0.0058 16.7 0.7 0.0058 16.7 0.7 1.4 2 0 0 2 2 2 1 Putative Actinobacterial Holin-X, holin superfamily III UNC-79 PF14776.6 AID31780.1 - 0.061 12.1 0.1 0.066 12.0 0.1 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 Saf_2TM PF18303.1 AID31780.1 - 0.071 12.7 0.3 0.13 11.8 0.2 1.5 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain DUF4093 PF13331.6 AID31780.1 - 0.1 13.1 0.2 0.18 12.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) DUF1236 PF06823.12 AID31781.1 - 3.1e-20 71.8 4.1 3.1e-20 71.8 4.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1236) RcnB PF11776.8 AID31781.1 - 0.077 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator ThiP_synth PF10120.9 AID31781.1 - 0.082 12.5 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Thiamine-phosphate synthase DUF768 PF05589.11 AID31785.1 - 7.4e-17 61.1 0.5 8.2e-17 61.0 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF768) Virul_fac_BrkB PF03631.15 AID31789.1 - 4.6e-60 203.4 28.1 5.4e-60 203.2 28.1 1.0 1 0 0 1 1 1 1 Virulence factor BrkB DUF3810 PF12725.7 AID31789.1 - 0.82 9.0 4.4 1.2 8.4 3.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Phage_holin_7_1 PF16081.5 AID31789.1 - 2.6 8.2 5.8 0.74 10.0 0.3 2.4 2 0 0 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family GAF_2 PF13185.6 AID31790.1 - 3.8e-32 111.5 2.7 6.1e-15 55.7 0.0 4.9 4 1 1 5 5 5 3 GAF domain GAF PF01590.26 AID31790.1 - 7.3e-29 101.1 0.0 4.2e-10 40.4 0.1 3.9 3 0 0 3 3 3 3 GAF domain HATPase_c PF02518.26 AID31790.1 - 8e-18 65.0 0.0 2.5e-17 63.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID31790.1 - 5.5e-17 62.0 0.5 6.7e-16 58.5 0.0 2.4 2 0 0 2 2 2 1 Response regulator receiver domain GAF_3 PF13492.6 AID31790.1 - 7.1e-16 58.7 0.0 3.2e-08 34.0 0.0 4.0 3 0 0 3 3 3 3 GAF domain PAS_4 PF08448.10 AID31790.1 - 9.3e-11 42.0 0.6 5.8e-05 23.3 0.0 4.0 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.12 AID31790.1 - 5.7e-09 36.1 0.0 1.7e-08 34.6 0.0 1.9 1 0 0 1 1 1 1 PAS fold HisKA PF00512.25 AID31790.1 - 8.8e-08 32.1 0.0 4.1e-07 29.9 0.0 2.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 AID31790.1 - 1.7e-07 31.4 0.0 0.00077 19.7 0.0 4.3 4 0 0 4 4 4 1 PAS domain HPTransfase PF10090.9 AID31790.1 - 0.0045 16.8 0.3 0.053 13.3 0.0 2.6 2 1 0 2 2 2 1 Histidine phosphotransferase C-terminal domain LolA PF03548.15 AID31793.1 - 3.9e-43 147.0 0.1 4.8e-43 146.7 0.1 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA CE2_N PF17996.1 AID31793.1 - 0.11 12.5 0.1 1.3 9.0 0.0 2.2 1 1 1 2 2 2 0 Carbohydrate esterase 2 N-terminal DUF2092 PF09865.9 AID31793.1 - 0.13 11.6 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2092) DNA_ligase_A_M PF01068.21 AID31794.1 - 1.1e-21 77.4 0.0 1.5e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 AID31794.1 - 7.1e-14 52.2 0.0 1.5e-13 51.2 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region SRAP PF02586.14 AID31796.1 - 2.1e-19 70.0 0.0 2.5e-19 69.7 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) Elf1 PF05129.13 AID31800.1 - 0.0038 17.3 0.6 0.0054 16.8 0.6 1.3 1 1 0 1 1 1 1 Transcription elongation factor Elf1 like Zn_Tnp_IS1595 PF12760.7 AID31800.1 - 0.02 14.9 1.3 0.03 14.3 1.3 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc-ribbons_6 PF07191.12 AID31800.1 - 0.033 14.2 0.2 0.044 13.8 0.2 1.2 1 0 0 1 1 1 0 zinc-ribbons zf-DNL PF05180.12 AID31800.1 - 0.07 13.1 0.3 0.1 12.6 0.3 1.4 1 1 0 1 1 1 0 DNL zinc finger DpnI PF06044.12 AID31800.1 - 0.11 12.1 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Dam-replacing family DNA_ligase_ZBD PF03119.16 AID31800.1 - 0.11 12.5 3.4 0.25 11.4 3.4 1.7 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C2H2_4 PF13894.6 AID31800.1 - 0.16 12.9 4.8 3.7 8.6 0.2 2.6 2 1 0 2 2 2 0 C2H2-type zinc finger Auto_anti-p27 PF06677.12 AID31800.1 - 0.44 10.8 2.9 0.94 9.7 2.9 1.6 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-H2C2_2 PF13465.6 AID31800.1 - 2.2 8.9 6.7 6.4 7.4 0.1 3.0 3 0 0 3 3 3 0 Zinc-finger double domain Elf1 PF05129.13 AID31803.1 - 0.0053 16.8 1.0 0.008 16.2 1.0 1.3 1 1 0 1 1 1 1 Transcription elongation factor Elf1 like Zn_Tnp_IS1595 PF12760.7 AID31803.1 - 0.0058 16.6 0.5 0.0086 16.0 0.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zinc_ribbon_4 PF13717.6 AID31803.1 - 0.013 15.4 0.4 0.88 9.6 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain ZZ PF00569.17 AID31803.1 - 0.023 14.5 0.8 0.33 10.8 0.0 2.1 2 0 0 2 2 2 0 Zinc finger, ZZ type TraH PF06122.11 AID31803.1 - 0.031 13.5 0.0 0.032 13.5 0.0 1.0 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein C1_2 PF03107.16 AID31803.1 - 0.035 14.4 2.8 2.2 8.7 0.4 2.1 1 1 1 2 2 2 0 C1 domain HypA PF01155.19 AID31803.1 - 0.045 13.8 0.1 0.049 13.6 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-TFIIB PF13453.6 AID31803.1 - 0.056 12.8 0.6 0.089 12.1 0.6 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger CpXC PF14353.6 AID31803.1 - 0.1 12.6 1.7 6.2 6.9 0.3 2.1 1 1 1 2 2 2 0 CpXC protein zf-ACC PF17848.1 AID31803.1 - 0.21 11.7 4.4 5.6 7.1 0.3 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-DNL PF05180.12 AID31803.1 - 0.23 11.4 2.2 0.44 10.5 2.2 1.5 1 1 0 1 1 1 0 DNL zinc finger zf-H2C2_2 PF13465.6 AID31803.1 - 0.32 11.5 4.7 1.1 9.8 0.2 2.8 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2 PF00096.26 AID31803.1 - 4.5 7.9 7.3 29 5.4 0.1 2.9 2 1 0 2 2 2 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.10 AID31803.1 - 5 7.3 7.1 0.67 10.1 2.0 2.1 2 1 0 2 2 2 0 Zinc ribbon domain DUF768 PF05589.11 AID31808.1 - 2.8e-32 110.5 0.2 3.2e-32 110.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF768) Ald_deCOase PF11266.8 AID31808.1 - 0.11 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase EAL PF00563.20 AID31809.1 - 1.8e-29 102.9 0.0 2.2e-29 102.7 0.0 1.0 1 0 0 1 1 1 1 EAL domain PAN_1 PF00024.26 AID31810.1 - 2.8e-13 49.6 3.3 1.1e-05 25.3 0.1 2.4 2 0 0 2 2 2 2 PAN domain PAN_4 PF14295.6 AID31810.1 - 2.7e-10 40.0 6.9 4.1e-07 29.8 0.8 2.4 2 0 0 2 2 2 2 PAN domain PAN_3 PF08277.12 AID31810.1 - 0.00038 20.2 5.2 0.2 11.5 0.7 2.3 2 0 0 2 2 2 2 PAN-like domain PAN_2 PF08276.11 AID31810.1 - 0.0027 17.8 4.2 0.049 13.8 0.1 2.5 2 0 0 2 2 2 2 PAN-like domain Spc7 PF08317.11 AID31811.1 - 0.077 11.9 21.9 0.42 9.5 8.2 2.3 1 1 0 2 2 2 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 AID31811.1 - 0.28 11.3 9.3 0.64 10.1 0.1 4.0 2 1 1 3 3 3 0 TolA binding protein trimerisation DUF4618 PF15397.6 AID31811.1 - 1.3 8.4 9.5 2.5 7.5 4.1 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4618) ATG16 PF08614.11 AID31811.1 - 3.3 7.9 29.2 0.45 10.7 11.3 2.6 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) PRKG1_interact PF15898.5 AID31811.1 - 10 7.1 16.3 1 10.3 1.3 3.4 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain S1-P1_nuclease PF02265.16 AID31812.1 - 1.1e-34 120.4 0.0 1.4e-34 120.1 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease Excalibur PF05901.11 AID31814.1 - 1.4e-07 32.0 1.1 1.4e-07 32.0 1.1 2.3 2 0 0 2 2 2 1 Excalibur calcium-binding domain SNase PF00565.17 AID31814.1 - 2.7e-06 27.8 0.0 4.1e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue VGCC_beta4Aa_N PF12052.8 AID31815.1 - 0.25 11.5 3.0 0.44 10.7 3.0 1.4 1 1 0 1 1 1 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal RHH_1 PF01402.21 AID31816.1 - 9.9e-06 25.3 0.3 9.9e-06 25.3 0.3 2.2 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family DNA_RNApol_7kD PF03604.13 AID31817.1 - 0.0038 16.9 4.6 0.43 10.3 0.3 2.3 2 0 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_4 PF13717.6 AID31817.1 - 0.01 15.7 3.5 0.3 11.0 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Elf1 PF05129.13 AID31817.1 - 0.016 15.2 1.3 3.6 7.7 0.1 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-RING_7 PF02591.15 AID31817.1 - 0.029 14.5 1.7 0.43 10.8 0.1 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain zinc_ribbon_5 PF13719.6 AID31817.1 - 0.034 13.9 4.5 1.2 9.0 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.26 AID31817.1 - 0.057 13.9 0.7 2.9 8.5 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-RRN7 PF11781.8 AID31817.1 - 0.074 12.8 1.4 2 8.2 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 CpXC PF14353.6 AID31817.1 - 0.11 12.6 0.7 1.1 9.4 1.3 2.0 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_12 PF11331.8 AID31817.1 - 0.21 11.4 1.3 3.7 7.4 0.1 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 AID31817.1 - 0.4 10.7 5.6 0.1 12.6 0.9 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-BED PF02892.15 AID31817.1 - 4.4 7.4 7.2 4.6 7.4 0.7 2.3 1 1 1 2 2 2 0 BED zinc finger DDE_Tnp_1 PF01609.21 AID31818.1 - 0.07 12.8 0.0 0.096 12.3 0.0 1.2 1 0 0 1 1 1 0 Transposase DDE domain SRAP PF02586.14 AID31820.1 - 2.1e-56 190.9 0.0 2.4e-56 190.7 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) S1-P1_nuclease PF02265.16 AID31823.1 - 3.7e-05 23.7 0.3 3.9e-05 23.6 0.3 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Phage_integrase PF00589.22 AID31825.1 - 2.7e-11 43.5 0.0 5.1e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family SIMPL PF04402.14 AID31826.1 - 2e-48 165.5 8.6 2.3e-48 165.3 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) PmbA_TldD PF01523.16 AID31826.1 - 0.027 14.3 0.3 0.027 14.3 0.3 1.5 2 0 0 2 2 2 0 Putative modulator of DNA gyrase Histone_HNS PF00816.21 AID31826.1 - 0.032 15.0 1.1 4.8 8.1 0.1 2.2 2 0 0 2 2 2 0 H-NS histone family End_tail_spike PF12219.8 AID31826.1 - 0.044 13.8 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase CxxCxxCC PF03692.15 AID31828.1 - 1.3e-10 41.8 5.8 2.3e-10 41.0 5.8 1.4 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain OmpA PF00691.20 AID31829.1 - 1.3e-20 73.6 0.0 5e-20 71.7 0.0 2.1 1 0 0 1 1 1 1 OmpA family Ketoacyl-synt_2 PF13723.6 AID31830.1 - 0.079 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain UPF0114 PF03350.16 AID31831.1 - 3.4e-28 98.2 5.9 3.4e-28 98.2 5.9 1.5 2 0 0 2 2 2 1 Uncharacterized protein family, UPF0114 adh_short PF00106.25 AID31832.1 - 1.4e-31 109.5 0.2 2e-31 108.9 0.2 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31832.1 - 4.8e-30 104.9 0.5 7e-30 104.3 0.5 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31832.1 - 1e-05 25.5 0.1 1.7e-05 24.8 0.1 1.3 1 0 0 1 1 1 1 KR domain YjeF_N PF03853.15 AID31832.1 - 0.037 13.9 0.1 0.061 13.2 0.1 1.2 1 0 0 1 1 1 0 YjeF-related protein N-terminus GerE PF00196.19 AID31833.1 - 1.2e-17 63.2 0.0 1.8e-17 62.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 AID31833.1 - 5.1e-05 22.9 0.1 0.00029 20.5 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 AID31833.1 - 6.2e-05 22.6 0.0 9.8e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_7 PF02796.15 AID31833.1 - 0.00057 19.9 0.0 0.0017 18.4 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_Tnp_ISL3 PF13542.6 AID31833.1 - 0.028 13.8 0.0 0.073 12.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_20 PF12840.7 AID31833.1 - 0.071 13.2 1.7 0.28 11.3 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_38 PF13936.6 AID31833.1 - 0.13 12.0 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID31833.1 - 0.14 11.7 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 PDZ_2 PF13180.6 AID31834.1 - 2.1e-15 56.8 0.0 4.1e-15 55.9 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 AID31834.1 - 6.3e-13 49.9 2.2 1e-12 49.2 2.2 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_6 PF17820.1 AID31834.1 - 8e-08 32.0 0.2 2.8e-07 30.3 0.2 2.0 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 AID31834.1 - 4.6e-05 23.7 0.0 0.00011 22.4 0.0 1.7 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 AID31835.1 - 2.2e-30 106.5 3.6 3.3e-30 106.0 3.6 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 AID31835.1 - 6e-13 48.9 0.2 1.7e-12 47.5 0.2 1.8 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 AID31835.1 - 1.1e-12 48.3 0.1 1.6e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 AID31835.1 - 7.8e-12 44.9 0.2 7.8e-12 44.9 0.2 2.4 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 AID31835.1 - 3.5e-07 30.5 0.2 1.1e-06 28.8 0.2 2.0 1 1 0 1 1 1 1 PDZ domain Peptidase_S32 PF05579.13 AID31835.1 - 0.00072 18.8 0.8 0.062 12.5 0.1 2.2 2 0 0 2 2 2 2 Equine arteritis virus serine endopeptidase S32 Tricorn_PDZ PF14685.6 AID31835.1 - 0.00092 19.1 0.1 0.0018 18.2 0.1 1.5 1 0 0 1 1 1 1 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 AID31835.1 - 0.0017 17.1 2.7 0.093 11.4 0.1 2.1 2 0 0 2 2 2 2 Peptidase S46 Peptidase_S29 PF02907.15 AID31835.1 - 0.037 13.8 0.2 0.4 10.4 0.2 2.4 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease GRASP55_65 PF04495.14 AID31835.1 - 0.1 12.9 0.0 0.56 10.5 0.0 2.0 2 0 0 2 2 2 0 GRASP55/65 PDZ-like domain TetR_N PF00440.23 AID31836.1 - 6.1e-18 64.3 1.6 1.4e-17 63.2 1.6 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family tRNA-synt_2 PF00152.20 AID31836.1 - 0.23 10.5 0.0 0.3 10.1 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Glyoxalase PF00903.25 AID31837.1 - 4.1e-10 40.0 0.0 7.2e-10 39.2 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID31837.1 - 0.0022 17.9 0.0 0.0028 17.6 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID31837.1 - 0.0038 18.0 0.0 0.005 17.6 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain LysR_substrate PF03466.20 AID31838.1 - 4.9e-29 101.2 1.4 6.3e-29 100.8 1.4 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31838.1 - 4.7e-19 68.1 0.2 1e-18 67.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family T2SSM_b PF10741.9 AID31838.1 - 0.041 13.7 0.0 0.081 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b Flavodoxin_2 PF02525.17 AID31839.1 - 6.7e-44 150.0 0.0 7.5e-44 149.8 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 AID31839.1 - 1.9e-08 34.2 0.0 4.9e-08 32.9 0.0 1.7 1 1 1 2 2 2 1 NADPH-dependent FMN reductase DDE_Tnp_2 PF04693.12 AID31840.1 - 0.00022 20.6 0.0 0.00026 20.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 AID31840.1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Transposase DDE domain AAA_23 PF13476.6 AID31843.1 - 9.2e-13 49.1 0.0 1.1e-12 49.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID31843.1 - 8.8e-09 35.1 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID31843.1 - 3.6e-07 29.8 0.0 5.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID31843.1 - 2.9e-06 27.2 0.0 2.9e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain DUF2813 PF11398.8 AID31843.1 - 0.00013 21.4 0.0 0.00017 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) RsgA_GTPase PF03193.16 AID31843.1 - 0.022 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 AID31843.1 - 0.036 13.9 0.1 0.049 13.4 0.1 1.3 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 AID31843.1 - 0.087 13.3 0.1 0.094 13.2 0.1 1.3 1 1 0 1 1 1 0 ABC transporter IstB_IS21 PF01695.17 AID31843.1 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein UPF0236 PF06782.11 AID31845.1 - 0.0065 15.2 0.1 0.0091 14.7 0.1 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0236) Protamine_P2 PF00841.19 AID31845.1 - 0.083 13.4 0.1 0.16 12.4 0.1 1.5 1 0 0 1 1 1 0 Sperm histone P2 WXG100 PF06013.12 AID31845.1 - 0.13 12.5 0.3 0.72 10.1 0.1 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG tRNA-synt_1f PF01921.18 AID31849.1 - 0.016 14.2 0.0 0.018 14.0 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (K) Flavodoxin_2 PF02525.17 AID31852.1 - 1.1e-08 35.0 0.0 1.5e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold RHH_1 PF01402.21 AID31853.1 - 4.5e-11 42.3 0.2 8.4e-11 41.4 0.2 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 AID31853.1 - 0.0023 17.8 0.1 0.005 16.7 0.1 1.6 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 Ferritin PF00210.24 AID31853.1 - 0.051 13.5 2.0 0.068 13.1 0.7 1.7 1 1 1 2 2 2 0 Ferritin-like domain TraY PF05509.11 AID31853.1 - 0.057 13.5 0.0 0.082 13.0 0.0 1.2 1 0 0 1 1 1 0 TraY domain Rnk_N PF14760.6 AID31853.1 - 2.1 8.9 6.3 0.3 11.6 0.8 2.0 2 0 0 2 2 2 0 Rnk N-terminus ParE_toxin PF05016.15 AID31854.1 - 6e-18 65.3 0.3 6.7e-18 65.1 0.3 1.0 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ChpA-C PF03777.13 AID31854.1 - 0.22 11.4 0.2 0.32 10.9 0.2 1.3 1 0 0 1 1 1 0 ChpA-C AzlD PF05437.12 AID31855.1 - 3.8e-15 55.9 13.2 4.2e-15 55.7 13.2 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) AzlC PF03591.14 AID31856.1 - 3.3e-36 124.7 7.0 3.3e-36 124.7 7.0 1.8 2 1 0 2 2 2 1 AzlC protein DUF3487 PF11990.8 AID31856.1 - 0.31 10.9 0.1 0.31 10.9 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3487) HTH_24 PF13412.6 AID31857.1 - 2.1e-19 68.8 0.1 2.9e-19 68.3 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 AID31857.1 - 6.3e-19 67.7 0.1 1e-18 67.1 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID31857.1 - 1.6e-17 63.0 1.1 2.5e-17 62.4 1.1 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 AID31857.1 - 9e-06 25.5 0.1 1.4e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID31857.1 - 2.2e-05 24.4 0.1 3.7e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID31857.1 - 0.00014 21.7 0.0 0.00024 20.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 AID31857.1 - 0.00032 20.5 0.1 0.00076 19.3 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 AID31857.1 - 0.00099 18.9 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID31857.1 - 0.0011 18.9 0.0 0.004 17.1 0.0 1.9 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_53 PF18606.1 AID31857.1 - 0.0047 16.6 0.0 0.0084 15.8 0.0 1.4 1 0 0 1 1 1 1 Zap helix turn helix N-terminal domain DprA_WH PF17782.1 AID31857.1 - 0.065 13.4 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 DprA winged helix domain Spore_YhcN_YlaJ PF09580.10 AID31857.1 - 0.099 12.7 0.1 0.17 12.0 0.1 1.4 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HTH_28 PF13518.6 AID31857.1 - 0.11 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MFS_1 PF07690.16 AID31858.1 - 6.8e-43 146.9 68.5 1.5e-25 89.9 40.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID31858.1 - 2.2e-06 27.2 45.8 3.1e-06 26.7 45.8 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 AID31858.1 - 8.5e-05 21.6 19.6 0.00071 18.5 13.2 2.3 1 1 0 2 2 2 2 MFS_1 like family LacY_symp PF01306.19 AID31858.1 - 0.002 16.9 10.3 0.002 16.9 10.3 2.0 2 0 0 2 2 2 1 LacY proton/sugar symporter Pyr_redox_2 PF07992.14 AID31859.1 - 8.5e-20 71.2 0.0 1.2e-19 70.7 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID31859.1 - 1e-06 29.2 0.0 0.011 16.3 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID31859.1 - 0.0014 18.3 1.2 4.9 6.6 0.1 3.1 3 0 0 3 3 3 3 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 AID31859.1 - 0.0024 17.9 0.8 3.1 7.8 0.1 2.7 3 0 0 3 3 3 2 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 AID31859.1 - 0.014 14.6 0.1 1.4 8.0 0.0 2.5 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase AhpC-TSA PF00578.21 AID31860.1 - 4.6e-28 97.6 0.0 5.9e-28 97.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 AID31860.1 - 4.9e-12 45.5 0.2 1.3e-11 44.2 0.2 1.8 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 AID31860.1 - 1e-09 38.3 0.0 1.7e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Redoxin BTAD PF03704.17 AID31862.1 - 1.8e-11 44.6 3.2 1.8e-11 44.6 3.2 4.7 3 2 0 3 3 3 1 Bacterial transcriptional activator domain TPR_MalT PF17874.1 AID31862.1 - 0.001 18.5 12.3 0.001 18.5 12.3 4.1 4 1 0 4 4 4 2 MalT-like TPR region Trans_reg_C PF00486.28 AID31862.1 - 0.11 12.5 0.0 0.27 11.3 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulatory protein, C terminal RPN7 PF10602.9 AID31862.1 - 0.14 11.9 0.0 13 5.4 0.0 3.1 3 0 0 3 3 3 0 26S proteasome subunit RPN7 Cob_adeno_trans PF01923.18 AID31862.1 - 0.42 10.7 2.7 0.66 10.1 0.7 2.3 3 0 0 3 3 3 0 Cobalamin adenosyltransferase TPR_2 PF07719.17 AID31862.1 - 2.9 8.2 23.0 13 6.2 0.2 7.6 9 0 0 9 9 9 0 Tetratricopeptide repeat TPR_19 PF14559.6 AID31862.1 - 7.9 7.1 20.7 1.2 9.6 2.0 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat Aminotran_1_2 PF00155.21 AID31863.1 - 1e-21 77.6 0.0 1.3e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID31863.1 - 2.2e-09 36.8 0.5 8.1e-09 35.0 0.2 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 AID31863.1 - 0.055 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Vir_act_alpha_C PF10400.9 AID31863.1 - 0.061 14.0 0.2 0.61 10.8 0.1 2.4 2 0 0 2 2 2 0 Virulence activator alpha C-term GFO_IDH_MocA PF01408.22 AID31864.1 - 1.3e-24 87.3 0.0 2.1e-24 86.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold AP_endonuc_2 PF01261.24 AID31865.1 - 1.3e-20 73.8 0.0 1.9e-20 73.2 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID31865.1 - 0.0059 16.3 0.0 0.021 14.5 0.0 1.9 2 0 0 2 2 2 1 AP endonuclease family 2 C terminus DUF2384 PF09722.10 AID31865.1 - 0.12 12.4 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) Peripla_BP_4 PF13407.6 AID31866.1 - 9e-42 143.4 2.6 1.2e-41 143.1 2.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID31866.1 - 6.6e-08 32.3 0.0 8.4e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 AID31866.1 - 5.6e-05 23.0 8.0 0.00083 19.1 2.5 2.1 1 1 1 2 2 2 2 Periplasmic binding protein BPD_transp_2 PF02653.16 AID31867.1 - 1.3e-67 227.8 40.4 1.3e-67 227.8 40.4 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Pam17 PF08566.10 AID31867.1 - 0.99 9.2 3.2 3.6 7.4 3.2 1.9 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 ABC_tran PF00005.27 AID31868.1 - 3.4e-30 105.3 0.0 5.3e-30 104.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID31868.1 - 8.2e-11 42.3 0.0 0.00018 21.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID31868.1 - 0.00047 19.8 0.0 0.001 18.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID31868.1 - 0.0026 17.2 0.0 0.071 12.5 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID31868.1 - 0.0056 16.6 0.0 0.0099 15.8 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID31868.1 - 0.0094 16.5 0.0 0.015 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 AID31868.1 - 0.015 14.9 0.5 0.6 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID31868.1 - 0.035 12.9 0.0 1.2 7.9 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class MukB PF04310.12 AID31868.1 - 0.084 12.7 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 AID31868.1 - 0.1 12.3 0.0 0.34 10.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain Esterase_phd PF10503.9 AID31869.1 - 9.3e-26 90.7 0.9 1.9e-25 89.7 0.9 1.5 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 AID31869.1 - 2.7e-10 40.1 0.0 4.2e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 AID31869.1 - 2.1e-05 23.9 0.7 0.00025 20.4 0.2 2.2 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 AID31869.1 - 0.00068 19.5 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 AID31869.1 - 0.00091 18.9 0.1 0.003 17.2 0.1 1.7 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 AID31869.1 - 0.00095 19.1 0.4 0.0032 17.3 0.1 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Esterase PF00756.20 AID31869.1 - 0.002 17.8 0.2 0.0029 17.3 0.2 1.2 1 0 0 1 1 1 1 Putative esterase AXE1 PF05448.12 AID31869.1 - 0.0075 15.0 0.1 0.013 14.2 0.1 1.3 1 0 0 1 1 1 1 Acetyl xylan esterase (AXE1) Phage_T4_gp36 PF03903.13 AID31869.1 - 0.02 14.9 0.1 0.029 14.3 0.1 1.3 1 0 0 1 1 1 0 Phage T4 tail fibre WSS_VP PF12175.8 AID31869.1 - 0.081 12.4 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP Lipase_3 PF01764.25 AID31869.1 - 0.18 11.7 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 Lipase (class 3) YflT PF11181.8 AID31870.1 - 6.4e-07 29.8 0.0 0.0028 18.1 0.0 2.2 2 0 0 2 2 2 2 Heat induced stress protein YflT Gly-zipper_Omp PF13488.6 AID31870.1 - 0.016 15.2 37.7 0.022 14.7 17.2 2.5 2 0 0 2 2 2 0 Glycine zipper HHH PF00633.23 AID31870.1 - 0.053 13.4 0.5 0.12 12.3 0.5 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif Transposase_20 PF02371.16 AID31870.1 - 0.088 13.1 0.5 0.18 12.2 0.5 1.4 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Phage_holin_3_6 PF07332.11 AID31870.1 - 0.32 11.0 10.9 0.47 10.5 10.9 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4142 PF13628.6 AID31871.1 - 2.7e-38 131.4 5.3 3.8e-38 130.9 5.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) DUF2383 PF09537.10 AID31871.1 - 0.00024 21.4 0.7 0.23 11.8 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF2383) DUF305 PF03713.13 AID31871.1 - 0.026 14.7 4.1 0.56 10.3 0.8 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF305) Fer2_2 PF01799.20 AID31872.1 - 1.3e-27 95.6 0.2 1.3e-27 95.6 0.2 2.1 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID31872.1 - 2.1e-08 34.0 0.3 2.1e-08 34.0 0.3 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID31872.1 - 2.3e-05 24.3 0.1 3.7e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 AID31872.1 - 0.01 15.9 2.0 0.061 13.4 1.3 2.5 1 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain PPR_1 PF12854.7 AID31872.1 - 0.26 11.0 0.0 0.26 11.0 0.0 1.8 2 0 0 2 2 2 0 PPR repeat Cytochrom_C PF00034.21 AID31873.1 - 1.8e-07 32.2 1.1 1.5e-05 26.0 0.0 2.3 2 0 0 2 2 2 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AID31873.1 - 1.5e-05 25.2 1.6 0.003 17.9 0.1 2.4 2 0 0 2 2 2 2 Cytochrome C oxidase, cbb3-type, subunit III Cytochrome_C7 PF14522.6 AID31873.1 - 0.0082 16.1 0.1 4.6 7.3 0.0 2.3 2 0 0 2 2 2 2 Cytochrome c7 and related cytochrome c GSu_C4xC__C2xCH PF09698.10 AID31873.1 - 0.11 13.3 5.0 0.5 11.2 0.2 2.5 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) Paired_CXXCH_1 PF09699.10 AID31873.1 - 0.36 10.6 4.2 6.9 6.5 0.3 2.4 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_CBB3 PF13442.6 AID31874.1 - 1.2e-10 41.5 0.1 8.2e-10 38.9 0.0 2.3 3 0 0 3 3 3 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AID31874.1 - 3.1e-08 34.6 0.0 1.5e-06 29.3 0.0 2.6 2 1 0 2 2 2 1 Cytochrome c Cytochrom_C550 PF14495.6 AID31874.1 - 0.098 12.4 0.1 0.27 11.0 0.1 2.0 1 1 0 1 1 1 0 Cytochrome c-550 domain Ald_Xan_dh_C2 PF02738.18 AID31875.1 - 3.3e-55 187.6 1.8 2.5e-34 118.7 0.0 3.1 2 1 1 3 3 3 3 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID31875.1 - 0.0057 17.0 0.0 0.088 13.2 0.0 2.4 1 1 1 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GCV_T PF01571.21 AID31876.1 - 4.5e-70 236.0 0.0 7.2e-70 235.3 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID31876.1 - 3.5e-57 194.6 3.6 6.3e-57 193.7 2.6 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase GCV_T_C PF08669.11 AID31876.1 - 1.5e-14 53.6 0.0 3.7e-14 52.4 0.0 1.7 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 AID31876.1 - 9.6e-13 48.3 0.0 1.8e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain SoxG PF04268.12 AID31876.1 - 0.0001 22.5 0.0 0.00018 21.7 0.0 1.3 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family Pyr_redox_3 PF13738.6 AID31876.1 - 0.00066 19.0 0.0 0.11 11.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID31876.1 - 0.0064 16.5 0.3 0.85 9.6 0.2 2.8 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 AID31876.1 - 0.073 11.8 0.0 0.18 10.5 0.0 1.6 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 AID31876.1 - 0.13 11.5 0.1 6.1 6.0 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HlyU PF10115.9 AID31877.1 - 2.9e-33 113.8 0.1 3.2e-33 113.6 0.1 1.0 1 0 0 1 1 1 1 Transcriptional activator HlyU DUF1024 PF06260.12 AID31877.1 - 0.044 14.1 0.0 0.055 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1024) CmcI PF04989.12 AID31878.1 - 8.4e-57 192.2 0.0 9.6e-57 192.0 0.0 1.0 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.6 AID31878.1 - 0.038 15.0 0.1 0.13 13.3 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain TylF PF05711.11 AID31879.1 - 5.1e-102 340.6 0.0 6e-102 340.3 0.0 1.0 1 0 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) Methyltransf_24 PF13578.6 AID31879.1 - 2.2e-09 38.3 0.0 4.3e-09 37.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TetR_C_33 PF13305.6 AID31880.1 - 3.5e-13 50.2 1.3 3.5e-13 50.2 1.3 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID31880.1 - 6.8e-08 32.2 0.3 3.4e-07 30.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 AID31880.1 - 0.00029 21.5 1.6 0.00037 21.2 0.4 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TrmB PF01978.19 AID31880.1 - 0.18 11.7 0.0 0.49 10.3 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PspA_IM30 PF04012.12 AID31881.1 - 5.5e-13 49.0 10.6 6.6e-13 48.8 10.6 1.1 1 0 0 1 1 1 1 PspA/IM30 family Tropomyosin_1 PF12718.7 AID31881.1 - 0.0065 16.6 2.9 0.12 12.6 0.5 2.2 2 0 0 2 2 2 2 Tropomyosin like Fez1 PF06818.15 AID31881.1 - 0.27 11.7 2.0 0.35 11.3 2.0 1.1 1 0 0 1 1 1 0 Fez1 SlyX PF04102.12 AID31881.1 - 8.3 7.1 7.8 1.6 9.4 1.8 2.3 1 1 1 2 2 2 0 SlyX YiaAB PF05360.14 AID31882.1 - 1.3e-08 35.0 4.7 1.7e-08 34.6 4.7 1.1 1 0 0 1 1 1 1 yiaA/B two helix domain GyrI-like PF06445.15 AID31884.1 - 1.4e-28 100.1 0.0 1.7e-28 99.9 0.0 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain DUF393 PF04134.12 AID31885.1 - 1e-22 81.6 0.1 1.2e-22 81.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF393 EamA PF00892.20 AID31886.1 - 2.2e-26 92.7 31.2 1.8e-18 67.0 10.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF333 PF03891.15 AID31887.1 - 4e-22 78.2 0.2 5.2e-22 77.8 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF333) GYD PF08734.11 AID31888.1 - 3.4e-32 110.3 0.0 3.7e-32 110.1 0.0 1.0 1 0 0 1 1 1 1 GYD domain AsnC_trans_reg PF01037.21 AID31888.1 - 0.0006 19.7 0.0 0.00091 19.2 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Sigma70_r3 PF04539.16 AID31889.1 - 2.5e-29 101.2 3.4 3.3e-29 100.8 0.6 2.5 3 0 0 3 3 3 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 AID31889.1 - 4.4e-22 77.6 1.2 8.1e-22 76.8 0.3 2.0 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID31889.1 - 2.5e-21 74.9 3.8 7.4e-19 67.0 1.1 2.7 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_ner PF04546.13 AID31889.1 - 3.9e-21 75.9 0.1 3.9e-21 75.9 0.1 2.3 2 1 0 2 2 2 1 Sigma-70, non-essential region HTH_15 PF12324.8 AID31889.1 - 0.027 14.4 0.4 0.68 9.9 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase HTH_25 PF13413.6 AID31889.1 - 0.038 13.8 1.9 9.4 6.2 0.0 3.5 3 0 0 3 3 3 0 Helix-turn-helix domain MarR_2 PF12802.7 AID31889.1 - 0.049 13.5 0.1 2.7 8.0 0.0 3.0 3 0 0 3 3 3 0 MarR family Syntaxin_2 PF14523.6 AID31889.1 - 0.13 12.6 1.6 17 5.9 0.1 3.1 3 0 0 3 3 3 0 Syntaxin-like protein Sigma70_r1_2 PF00140.20 AID31890.1 - 2.9e-11 43.2 0.9 6.7e-11 42.0 0.9 1.7 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 Sigma70_ner PF04546.13 AID31890.1 - 7.9e-07 29.2 3.1 1e-06 28.8 3.1 1.1 1 0 0 1 1 1 1 Sigma-70, non-essential region PBP1_TM PF14812.6 AID31890.1 - 0.099 13.0 2.6 0.14 12.5 2.6 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MadL PF03817.13 AID31891.1 - 0.11 12.5 0.5 0.21 11.6 0.5 1.5 1 0 0 1 1 1 0 Malonate transporter MadL subunit Toprim_N PF08275.11 AID31892.1 - 3e-40 137.2 0.0 5.8e-40 136.3 0.0 1.5 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain zf-CHC2 PF01807.20 AID31892.1 - 1.2e-27 95.6 0.0 2.9e-27 94.4 0.0 1.7 1 0 0 1 1 1 1 CHC2 zinc finger Toprim_4 PF13662.6 AID31892.1 - 3.5e-16 59.5 0.0 7e-16 58.5 0.0 1.5 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 AID31892.1 - 5.7e-16 58.7 0.0 2e-15 57.0 0.0 2.0 2 0 0 2 2 2 1 Toprim-like Toprim_3 PF13362.6 AID31892.1 - 9.3e-07 29.1 0.5 3.2e-06 27.4 0.0 2.2 2 0 0 2 2 2 1 Toprim domain Toprim PF01751.22 AID31892.1 - 1.7e-06 28.2 0.0 3.9e-06 27.0 0.0 1.6 1 0 0 1 1 1 1 Toprim domain DnaB_bind PF10410.9 AID31892.1 - 0.0007 19.7 0.1 0.002 18.3 0.1 1.9 1 0 0 1 1 1 1 DnaB-helicase binding domain of primase T3SS_needle_F PF09392.10 AID31892.1 - 0.26 11.5 1.1 0.76 10.0 1.1 1.8 1 0 0 1 1 1 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF RcnB PF11776.8 AID31893.1 - 1.2e-15 57.3 3.8 2.7e-15 56.1 3.8 1.7 1 0 0 1 1 1 1 Nickel/cobalt transporter regulator Na_Pi_cotrans PF02690.15 AID31894.1 - 6.3e-37 126.8 27.7 1.7e-29 102.7 8.8 2.5 1 1 1 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 AID31894.1 - 6.4e-12 45.8 3.8 4.2e-07 30.3 1.2 2.5 2 0 0 2 2 2 2 PhoU domain AAA_lid_2 PF17863.1 AID31894.1 - 0.0081 16.0 3.3 0.011 15.6 0.7 2.4 2 0 0 2 2 2 1 AAA lid domain DUF2061 PF09834.9 AID31895.1 - 1e-21 77.2 3.9 1.1e-21 77.0 3.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2061) MFS_1 PF07690.16 AID31896.1 - 5.4e-37 127.5 60.3 5.9e-28 97.8 30.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID31896.1 - 1.3e-07 31.2 43.5 1.7e-07 30.9 43.5 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB E1-E2_ATPase PF00122.20 AID31897.1 - 1.8e-52 177.5 0.1 1.8e-52 177.5 0.1 2.6 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 AID31897.1 - 2.6e-42 145.5 7.4 4.9e-42 144.6 7.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 AID31897.1 - 1.8e-07 31.5 1.0 3.4e-07 30.6 0.1 2.0 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 AID31897.1 - 0.00047 20.0 0.1 0.00047 20.0 0.1 2.4 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID31897.1 - 0.002 18.6 0.8 0.01 16.3 0.1 2.6 3 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID31897.1 - 0.0088 16.1 0.0 0.033 14.3 0.0 2.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase MerR-DNA-bind PF09278.11 AID31898.1 - 3.6e-19 69.0 3.0 5.5e-19 68.5 3.0 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 AID31898.1 - 4.5e-19 68.3 0.2 9.2e-19 67.3 0.1 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AID31898.1 - 1.7e-14 53.3 0.5 2.9e-14 52.5 0.5 1.4 1 0 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 AID31898.1 - 0.021 15.0 0.1 0.043 14.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3723 PF12520.8 AID31898.1 - 0.12 11.0 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3723) Peptidase_S58 PF03576.14 AID31899.1 - 2e-109 365.7 4.8 2.3e-109 365.5 4.8 1.0 1 0 0 1 1 1 1 Peptidase family S58 Acetyltransf_3 PF13302.7 AID31900.1 - 5.8e-10 40.0 0.0 7e-10 39.7 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID31900.1 - 4.8e-07 30.0 0.0 9.9e-07 29.0 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family DUF2226 PF09987.9 AID31900.1 - 0.068 12.5 0.0 0.092 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2226) Acetyltransf_9 PF13527.7 AID31900.1 - 0.14 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain UBM PF14377.6 AID31900.1 - 0.61 9.6 2.8 1.1 8.8 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin binding region DnaB_C PF03796.15 AID31901.1 - 8.7e-16 58.0 0.0 2.5e-07 30.3 0.0 2.4 2 1 1 3 3 3 2 DnaB-like helicase C terminal domain ATPase PF06745.13 AID31901.1 - 4.2e-09 36.1 0.0 1.7e-07 30.8 0.0 2.0 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 AID31901.1 - 5.3e-05 22.9 0.0 7.7e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 AID31901.1 - 0.012 15.4 0.0 0.022 14.5 0.0 1.6 1 1 0 1 1 1 0 IstB-like ATP binding protein PhoH PF02562.16 AID31901.1 - 0.037 13.5 0.0 0.052 13.0 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein ResIII PF04851.15 AID31901.1 - 0.22 11.5 0.0 0.33 10.9 0.0 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit YkuD_2 PF13645.6 AID31902.1 - 1.7e-06 27.6 0.8 0.00022 20.7 0.8 2.8 1 1 0 1 1 1 1 L,D-transpeptidase catalytic domain Abhydrolase_1 PF00561.20 AID31903.1 - 3e-20 73.0 0.1 2e-16 60.4 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID31903.1 - 5.9e-13 49.9 5.4 7e-13 49.7 5.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID31903.1 - 8.6e-12 44.8 0.1 1.4e-11 44.1 0.1 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 AID31903.1 - 3.8e-06 25.8 0.0 4.8e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Ndr family DXP_reductoisom PF02670.16 AID31903.1 - 0.13 12.9 0.0 0.21 12.3 0.0 1.4 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase LysR_substrate PF03466.20 AID31904.1 - 1.6e-23 83.2 1.1 1.6e-23 83.2 1.1 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID31904.1 - 1.5e-16 60.1 0.1 3e-16 59.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF2807 PF10988.8 AID31905.1 - 2.5e-34 118.6 0.6 8e-33 113.8 0.6 2.2 1 1 0 1 1 1 1 Putative auto-transporter adhesin, head GIN domain DUF4402 PF14352.6 AID31905.1 - 0.041 14.5 2.3 2.8 8.6 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4402) DUF5616 PF18481.1 AID31905.1 - 0.14 12.5 0.1 11 6.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5616) DUF1700 PF08006.11 AID31906.1 - 2.8e-23 82.4 0.0 3.2e-23 82.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) PadR PF03551.14 AID31907.1 - 6.7e-20 70.8 0.0 8.6e-20 70.5 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 AID31907.1 - 8.7e-05 22.6 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 AID31907.1 - 0.0096 15.8 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 AID31907.1 - 0.079 12.8 0.0 0.1 12.5 0.0 1.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix adh_short_C2 PF13561.6 AID31908.1 - 9.4e-24 84.2 0.4 1.2e-23 83.9 0.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID31908.1 - 1.7e-21 76.6 0.1 2.3e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID31908.1 - 4.3e-06 26.7 0.1 5.7e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 KR domain PALP PF00291.25 AID31908.1 - 0.00069 19.1 0.1 0.00098 18.6 0.1 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme baeRF_family2 PF18844.1 AID31908.1 - 0.051 13.6 1.5 0.27 11.3 0.2 2.0 1 1 1 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 PTE PF02126.18 AID31908.1 - 0.11 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Phosphotriesterase family HTH_18 PF12833.7 AID31909.1 - 7e-21 74.3 1.2 1.6e-19 69.9 1.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID31909.1 - 2.4e-15 56.2 0.0 6.9e-08 32.4 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family YqeY PF09424.10 AID31910.1 - 2.2e-50 170.5 2.8 2.4e-50 170.3 2.8 1.0 1 0 0 1 1 1 1 Yqey-like protein Gastrin PF00918.17 AID31910.1 - 0.024 15.6 2.1 5.5 8.0 0.5 2.1 1 1 1 2 2 2 0 Gastrin/cholecystokinin family GATase PF00117.28 AID31911.1 - 6.6e-47 159.7 0.0 8.6e-47 159.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.22 AID31911.1 - 1.5e-45 154.1 0.0 2.3e-45 153.5 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.13 AID31911.1 - 2.1e-08 34.2 1.3 2.1e-07 30.9 1.3 2.4 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 AID31911.1 - 0.074 12.8 0.0 0.3 10.9 0.0 2.0 2 1 0 2 2 2 0 DJ-1/PfpI family Aldo_ket_red PF00248.21 AID31913.1 - 2.5e-52 177.9 0.0 3.5e-52 177.4 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family MFS_1 PF07690.16 AID31914.1 - 1.8e-60 204.8 67.5 9.8e-52 176.0 38.9 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID31914.1 - 3.8e-16 59.0 7.8 3.8e-16 59.0 7.8 3.2 2 2 1 3 3 3 1 Sugar (and other) transporter MFS_1_like PF12832.7 AID31914.1 - 1e-10 41.1 22.3 1.2e-05 24.4 9.2 2.3 1 1 1 2 2 2 2 MFS_1 like family LacY_symp PF01306.19 AID31914.1 - 1e-06 27.8 18.2 8.6e-06 24.8 18.2 2.1 1 1 0 1 1 1 1 LacY proton/sugar symporter MFS_3 PF05977.13 AID31914.1 - 2.4e-06 26.3 9.4 5.9e-06 25.0 9.4 1.5 1 1 0 1 1 1 1 Transmembrane secretion effector TRI12 PF06609.13 AID31914.1 - 3.5e-05 22.4 3.4 5.7e-05 21.7 3.4 1.4 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_4 PF06779.14 AID31914.1 - 0.0039 16.5 26.2 0.0088 15.4 8.2 2.4 1 1 1 2 2 2 2 Uncharacterised MFS-type transporter YbfB Zn_peptidase PF04228.13 AID31915.1 - 6.1e-143 475.5 2.4 6.8e-143 475.4 2.4 1.0 1 0 0 1 1 1 1 Putative neutral zinc metallopeptidase Reprolysin_3 PF13582.6 AID31915.1 - 0.02 15.4 0.1 0.044 14.3 0.1 1.7 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF3152 PF11350.8 AID31915.1 - 0.068 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3152) Aspzincin_M35 PF14521.6 AID31915.1 - 0.13 12.8 0.0 0.25 11.9 0.0 1.5 1 1 0 1 1 1 0 Lysine-specific metallo-endopeptidase Fe_dep_repress PF01325.19 AID31918.1 - 2.6e-13 50.0 0.0 5.1e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 AID31918.1 - 1.5e-12 47.4 1.4 2.6e-12 46.6 1.4 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.7 AID31918.1 - 3.9e-07 29.9 0.3 1.3e-06 28.2 0.1 1.9 2 0 0 2 2 2 1 MarR family MarR PF01047.22 AID31918.1 - 2.7e-06 27.2 0.0 5e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 MarR family GntR PF00392.21 AID31918.1 - 1.7e-05 24.4 0.3 5.9e-05 22.6 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 AID31918.1 - 2.4e-05 24.1 0.0 0.0045 16.9 0.0 2.2 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID31918.1 - 2.7e-05 23.6 0.0 5e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID31918.1 - 3e-05 23.9 0.0 6.1e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 AID31918.1 - 0.0008 19.2 0.0 0.0018 18.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 AID31918.1 - 0.0021 18.5 0.0 0.0035 17.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 AID31918.1 - 0.0037 17.0 0.0 3.1 7.6 0.0 2.3 2 0 0 2 2 2 2 DeoR-like helix-turn-helix domain HTH_37 PF13744.6 AID31918.1 - 0.0064 16.4 0.1 0.015 15.3 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID31918.1 - 0.0082 15.9 0.1 0.094 12.5 0.0 2.5 2 1 0 2 2 2 1 Homeodomain-like domain HTH_1 PF00126.27 AID31918.1 - 0.01 15.8 0.1 0.037 14.0 0.1 1.9 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_38 PF13936.6 AID31918.1 - 0.026 14.3 0.0 0.052 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID31918.1 - 0.037 14.4 0.0 0.16 12.3 0.0 1.9 1 1 1 2 2 2 0 Transcriptional regulator YdaS_antitoxin PF15943.5 AID31918.1 - 0.044 13.6 0.0 1.4 8.8 0.0 2.2 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Penicillinase_R PF03965.16 AID31918.1 - 0.055 13.8 0.0 0.12 12.7 0.0 1.8 1 1 0 1 1 1 0 Penicillinase repressor HxlR PF01638.17 AID31918.1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.4 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_5 PF01022.20 AID31918.1 - 0.095 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 AID31918.1 - 0.099 12.5 0.0 1.6 8.6 0.0 2.5 2 1 1 3 3 3 0 HTH DNA binding domain HTH_Tnp_Tc3_2 PF01498.18 AID31918.1 - 0.11 12.8 0.1 18 5.7 0.1 2.9 2 1 1 3 3 3 0 Transposase HTH_40 PF14493.6 AID31918.1 - 0.12 12.8 0.2 22 5.6 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 AID31918.1 - 0.27 11.1 0.0 0.27 11.1 0.0 2.5 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain Nramp PF01566.18 AID31919.1 - 3.9e-133 443.9 27.5 5.3e-133 443.4 27.5 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein PCMT PF01135.19 AID31920.1 - 2.2e-19 70.0 0.0 8.6e-19 68.1 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 AID31920.1 - 1.5e-07 30.8 0.0 2.2e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 AID31920.1 - 6.5e-06 26.8 0.0 1.4e-05 25.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID31920.1 - 7e-05 23.4 0.0 0.0003 21.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain GCD14 PF08704.10 AID31920.1 - 0.00088 19.0 0.0 0.0014 18.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 AID31920.1 - 0.0018 18.1 0.0 0.0027 17.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID31920.1 - 0.006 16.1 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_24 PF13578.6 AID31920.1 - 0.031 15.3 0.0 0.073 14.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 AID31920.1 - 0.092 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 AID31920.1 - 0.12 12.4 0.0 0.29 11.2 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase Ubie_methyltran PF01209.18 AID31920.1 - 0.15 11.4 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Met_10 PF02475.16 AID31920.1 - 0.16 11.7 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein B_solenoid_ydck PF18836.1 AID31920.1 - 2.1 8.3 3.5 3.3 7.7 0.3 2.7 2 0 0 2 2 2 0 Beta solenoid repeat from YDCK RibD_C PF01872.17 AID31921.1 - 7.4e-35 120.6 0.0 1e-34 120.2 0.0 1.2 1 0 0 1 1 1 1 RibD C-terminal domain LysR_substrate PF03466.20 AID31922.1 - 2.1e-26 92.6 2.3 3e-26 92.1 2.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31922.1 - 1.1e-20 73.3 1.4 2.2e-20 72.3 1.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID31922.1 - 0.00095 18.9 0.1 0.0033 17.2 0.1 2.0 1 1 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR_2 PF12802.7 AID31922.1 - 0.0066 16.3 0.2 0.02 14.7 0.2 1.9 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID31922.1 - 0.0087 15.6 0.0 0.017 14.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 AID31922.1 - 0.081 13.1 0.0 0.27 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 AID31922.1 - 0.098 12.5 0.1 0.25 11.2 0.1 1.8 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain MarR PF01047.22 AID31922.1 - 0.19 11.7 0.1 0.41 10.6 0.1 1.5 1 0 0 1 1 1 0 MarR family LysE PF01810.18 AID31923.1 - 2.6e-11 43.4 15.8 3.4e-11 43.0 15.8 1.1 1 0 0 1 1 1 1 LysE type translocator adh_short PF00106.25 AID31924.1 - 5.1e-45 153.4 0.7 6.2e-45 153.1 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID31924.1 - 5.9e-28 98.0 2.0 7.4e-28 97.7 2.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID31924.1 - 2e-10 40.9 1.1 2.6e-10 40.5 1.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID31924.1 - 5.4e-07 29.3 0.4 9.9e-07 28.5 0.4 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID31924.1 - 1.7e-05 24.4 0.1 2.5e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 AID31924.1 - 0.018 15.3 2.4 1.6 9.0 0.5 2.7 1 1 1 2 2 2 0 TrkA-N domain ApbA PF02558.16 AID31924.1 - 0.024 14.3 0.1 0.084 12.5 0.1 1.9 1 1 1 2 2 2 0 Ketopantoate reductase PanE/ApbA PIN_9 PF18477.1 AID31924.1 - 0.28 11.5 4.6 0.11 12.8 1.3 1.9 2 0 0 2 2 2 0 PIN like domain MarR_2 PF12802.7 AID31925.1 - 1.5e-07 31.2 0.0 2.3e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID31925.1 - 3.3e-07 30.7 0.0 5.2e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 AID31925.1 - 4.8e-06 26.4 0.0 7.8e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 MarR family APP_E2 PF12925.7 AID31925.1 - 0.028 14.2 0.2 0.036 13.8 0.2 1.1 1 0 0 1 1 1 0 E2 domain of amyloid precursor protein PadR PF03551.14 AID31925.1 - 0.13 12.2 0.0 0.43 10.6 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family MFS_1_like PF12832.7 AID31925.1 - 0.19 10.5 0.0 0.24 10.2 0.0 1.1 1 0 0 1 1 1 0 MFS_1 like family MFS_1 PF07690.16 AID31926.1 - 2.4e-38 132.0 99.2 3.8e-36 124.7 57.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily HTH_20 PF12840.7 AID31927.1 - 9.1e-11 41.7 0.0 2.1e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID31927.1 - 5.4e-07 29.4 0.1 1.2e-06 28.3 0.1 1.6 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family CMD PF02627.20 AID31927.1 - 0.045 13.8 0.1 0.068 13.2 0.1 1.5 1 1 0 1 1 1 0 Carboxymuconolactone decarboxylase family HTH_34 PF13601.6 AID31927.1 - 0.16 12.2 0.1 0.25 11.5 0.1 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain MafB19-deam PF14437.6 AID31928.1 - 2.3e-12 46.8 0.0 3.1e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 AID31928.1 - 3.2e-12 46.2 0.0 4.6e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Metallophos_2 PF12850.7 AID31929.1 - 3.7e-20 72.8 0.0 5e-20 72.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 AID31929.1 - 2.6e-09 37.9 0.1 5e-08 33.7 0.0 2.0 1 1 0 2 2 2 1 Calcineurin-like phosphoesterase RibD_C PF01872.17 AID31929.1 - 0.026 14.4 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 RibD C-terminal domain SH3_3 PF08239.11 AID31930.1 - 2.3e-06 27.8 0.0 4.1e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_4 PF06347.13 AID31930.1 - 0.068 13.0 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial SH3 domain CPSase_L_D2 PF02786.17 AID31931.1 - 4.9e-42 143.8 0.0 3.4e-15 56.1 0.0 4.2 3 1 1 4 4 4 3 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 AID31931.1 - 3.8e-37 127.4 0.0 9.3e-37 126.1 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 AID31931.1 - 1.2e-19 70.3 0.0 8e-19 67.6 0.0 2.6 3 0 0 3 3 3 1 MGS-like domain ATPgrasp_Ter PF15632.6 AID31931.1 - 3.9e-09 36.4 0.2 9.7e-06 25.4 0.1 3.1 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 AID31931.1 - 4e-05 23.7 0.0 0.0011 19.1 0.0 2.7 2 1 0 2 2 2 1 ATP-grasp domain B12-binding PF02310.19 AID31931.1 - 0.0016 18.4 1.9 4.5 7.3 0.0 4.7 4 2 2 6 6 6 2 B12 binding domain ATP-grasp PF02222.22 AID31931.1 - 0.0039 16.8 0.0 1.6 8.2 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain CbiA PF01656.23 AID31931.1 - 0.016 15.3 0.1 4.1 7.5 0.0 2.9 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain CoA_binding_2 PF13380.6 AID31931.1 - 0.021 15.3 0.0 3.3 8.2 0.0 3.3 2 1 0 2 2 2 0 CoA binding domain DUF4176 PF13780.6 AID31931.1 - 0.092 12.8 0.0 22 5.2 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4176) HATPase_c_4 PF13749.6 AID31932.1 - 5e-12 45.8 0.0 1.5e-11 44.3 0.0 1.8 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal AlbA_2 PF04326.14 AID31932.1 - 2.9e-10 40.6 0.4 6.4e-10 39.4 0.1 1.7 2 0 0 2 2 2 1 Putative DNA-binding domain Ribonuc_L-PSP PF01042.21 AID31933.1 - 2.6e-25 88.8 0.0 3e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4817 PF16087.5 AID31933.1 - 0.13 12.0 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) Ribonuc_L-PSP PF01042.21 AID31935.1 - 8.6e-27 93.6 0.0 1.1e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4142 PF13628.6 AID31936.1 - 4.2e-35 121.0 11.1 5.2e-35 120.7 11.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) DUF305 PF03713.13 AID31936.1 - 2.6e-08 34.1 4.1 5.3e-07 29.9 0.9 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF305) GAGE PF05831.11 AID31936.1 - 0.23 12.0 1.6 0.57 10.7 0.3 2.2 1 1 2 3 3 3 0 GAGE protein Virul_fac_BrkB PF03631.15 AID31937.1 - 9.2e-51 172.9 31.4 9.2e-51 172.9 31.4 1.4 2 0 0 2 2 2 1 Virulence factor BrkB DUF899 PF05988.12 AID31938.1 - 8.1e-64 215.1 0.0 9.8e-64 214.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) Acetyltransf_1 PF00583.25 AID31940.1 - 4.6e-14 52.7 0.0 5.9e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID31940.1 - 1.8e-10 41.1 0.0 2.7e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID31940.1 - 6.5e-09 35.8 0.0 8.3e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID31940.1 - 3.3e-05 23.8 0.0 4.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 AID31940.1 - 6.9e-05 22.9 0.0 0.00024 21.2 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID31940.1 - 0.0034 17.5 0.0 0.0057 16.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 AID31940.1 - 0.015 15.4 0.2 0.045 13.9 0.2 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain SLT PF01464.20 AID31941.1 - 1.3e-11 44.2 0.0 2e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain DNA_binding_1 PF01035.20 AID31943.1 - 1.3e-24 86.2 0.0 1.9e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain CSD PF00313.22 AID31946.1 - 1e-23 82.9 0.1 1.1e-23 82.8 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID31946.1 - 0.00019 21.1 0.3 0.00021 20.9 0.3 1.4 1 1 0 1 1 1 1 Ribonuclease B OB domain Rho_RNA_bind PF07497.12 AID31946.1 - 0.046 13.6 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain S1 PF00575.23 AID31946.1 - 0.062 13.6 0.0 0.069 13.5 0.0 1.1 1 0 0 1 1 1 0 S1 RNA binding domain CusF_Ec PF11604.8 AID31946.1 - 0.12 12.4 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF GST_N PF02798.20 AID31947.1 - 8.3e-12 45.3 0.0 1.4e-11 44.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 AID31947.1 - 1.1e-10 41.7 0.0 2.3e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID31947.1 - 2.1e-09 37.5 0.1 3e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID31947.1 - 2.8e-09 37.1 0.0 5.8e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID31947.1 - 1.4e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID31947.1 - 9.5e-08 32.0 0.5 2.1e-07 30.9 0.2 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 AID31947.1 - 0.0092 15.8 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain EAL PF00563.20 AID31948.1 - 1.3e-29 103.5 0.0 1.6e-29 103.1 0.0 1.1 1 0 0 1 1 1 1 EAL domain EAL PF00563.20 AID31949.1 - 2.2e-35 122.3 0.0 2.8e-35 122.0 0.0 1.0 1 0 0 1 1 1 1 EAL domain HATPase_c_2 PF13581.6 AID31949.1 - 0.11 12.4 0.0 0.24 11.4 0.0 1.5 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain Aminotran_1_2 PF00155.21 AID31950.1 - 9.2e-78 261.9 0.0 1.1e-77 261.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID31950.1 - 1.2e-07 31.4 0.0 1.8e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 AID31950.1 - 0.0067 15.0 0.0 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 AID31950.1 - 0.16 10.6 0.0 0.29 9.8 0.0 1.3 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain MFS_1 PF07690.16 AID31951.1 - 2.3e-57 194.5 52.0 2.4e-57 194.5 46.4 2.4 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID31951.1 - 5.1e-07 28.9 9.5 5.1e-07 28.9 9.5 2.6 2 1 1 3 3 3 1 Sugar (and other) transporter MFS_5 PF05631.14 AID31951.1 - 0.00025 20.1 0.2 0.00071 18.6 0.2 1.8 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM LacY_symp PF01306.19 AID31951.1 - 0.00058 18.7 2.3 0.21 10.3 0.0 2.4 2 0 0 2 2 2 2 LacY proton/sugar symporter TetR_N PF00440.23 AID31952.1 - 6.6e-16 57.8 1.2 1.2e-15 57.0 1.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 AID31952.1 - 0.00016 21.9 0.1 0.0007 19.8 0.0 2.1 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_15 PF17918.1 AID31952.1 - 0.00099 19.8 0.0 0.0033 18.1 0.0 1.9 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_7 PF14246.6 AID31952.1 - 0.03 14.4 0.1 0.17 11.9 0.0 2.1 2 0 0 2 2 2 0 AefR-like transcriptional repressor, C-terminal domain HTH_Tnp_1_2 PF13022.6 AID31952.1 - 0.16 12.1 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TetR_C_33 PF13305.6 AID31952.1 - 0.18 12.6 1.9 0.41 11.4 1.9 1.9 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PLDc_2 PF13091.6 AID31952.1 - 0.21 11.5 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 PLD-like domain Cupin_2 PF07883.11 AID31953.1 - 3.1e-11 42.8 0.9 4.4e-11 42.3 0.9 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID31953.1 - 8.5e-06 25.7 0.4 1.1e-05 25.3 0.4 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 AID31953.1 - 0.00086 18.9 0.0 0.0011 18.5 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_7 PF12973.7 AID31953.1 - 0.0033 17.3 0.0 0.0063 16.4 0.0 1.5 1 0 0 1 1 1 1 ChrR Cupin-like domain Cupin_3 PF05899.12 AID31953.1 - 0.067 12.9 0.1 0.12 12.1 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF861) EAL PF00563.20 AID31954.1 - 9e-70 234.9 0.1 1.7e-69 234.0 0.0 1.5 2 0 0 2 2 2 1 EAL domain GGDEF PF00990.21 AID31954.1 - 2.5e-33 115.1 0.0 5.1e-33 114.1 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain EFG_IV PF03764.18 AID31955.1 - 4.3e-44 149.2 0.0 7.5e-44 148.4 0.0 1.4 1 0 0 1 1 1 1 Elongation factor G, domain IV GTP_EFTU PF00009.27 AID31955.1 - 6.4e-27 94.4 0.0 1.2e-26 93.4 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_II PF14492.6 AID31955.1 - 3.8e-22 78.2 0.0 8.3e-22 77.1 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 AID31955.1 - 1.3e-20 73.2 0.0 2.8e-20 72.1 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AID31955.1 - 1.5e-07 31.7 0.1 3.2e-07 30.6 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 AID31955.1 - 1.9e-05 24.7 0.0 4.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 AID31955.1 - 0.00041 20.4 0.0 0.0031 17.6 0.0 2.2 1 1 1 2 2 2 1 Dynamin family AAA_23 PF13476.6 AID31955.1 - 0.0026 18.3 0.0 0.0053 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID31955.1 - 0.0059 17.0 1.3 0.043 14.2 0.2 2.7 2 1 0 2 2 2 1 AAA ATPase domain FeoB_N PF02421.18 AID31955.1 - 0.013 15.0 0.1 0.4 10.2 0.1 2.5 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_18 PF13238.6 AID31955.1 - 0.02 15.4 0.3 0.85 10.2 0.0 3.3 3 1 1 4 4 4 0 AAA domain RF3_C PF16658.5 AID31955.1 - 0.027 14.3 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain AAA_22 PF13401.6 AID31955.1 - 0.059 13.6 0.0 0.15 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 AID31955.1 - 0.11 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system SRPRB PF09439.10 AID31955.1 - 0.11 11.9 0.0 0.29 10.5 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit cobW PF02492.19 AID31955.1 - 0.13 11.8 0.1 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 AID31955.1 - 0.14 12.7 0.0 0.41 11.2 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 AID31955.1 - 0.16 11.7 0.0 0.36 10.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain PEMT PF04191.13 AID31956.1 - 2.5e-21 76.1 0.9 3.7e-21 75.5 0.9 1.2 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 AID31956.1 - 5.4e-05 23.5 0.4 9.1e-05 22.8 0.4 1.4 1 1 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 AID31956.1 - 0.07 11.9 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family RseC_MucC PF04246.12 AID31956.1 - 6.3 6.8 5.5 0.56 10.2 0.3 1.8 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC LysR_substrate PF03466.20 AID31957.1 - 9.2e-41 139.5 0.1 1.2e-40 139.2 0.1 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID31957.1 - 2.7e-24 84.9 0.4 5.3e-24 84.0 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID31957.1 - 0.036 13.9 0.0 0.15 12.0 0.0 2.1 1 0 0 1 1 1 0 MarR family HTH_50 PF18024.1 AID31957.1 - 0.17 11.5 0.2 0.4 10.3 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Pyr_redox_2 PF07992.14 AID31958.1 - 2.3e-49 168.2 0.2 2.7e-49 168.0 0.2 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID31958.1 - 3e-20 72.7 0.0 1.5e-16 60.5 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID31958.1 - 5.3e-17 62.2 0.1 1.2e-15 57.8 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID31958.1 - 3e-07 29.9 1.7 0.029 13.4 0.1 4.1 4 0 0 4 4 4 1 Glucose inhibited division protein A DAO PF01266.24 AID31958.1 - 9.8e-06 25.4 2.9 1.4 8.5 0.0 3.8 4 1 0 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID31958.1 - 1.2e-05 24.5 4.3 0.002 17.3 0.5 3.9 3 1 1 4 4 4 1 FAD binding domain K_oxygenase PF13434.6 AID31958.1 - 0.00068 18.9 0.0 0.0064 15.7 0.0 2.3 1 1 1 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 AID31958.1 - 0.00068 20.0 0.1 0.053 14.0 0.1 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_oxidored PF12831.7 AID31958.1 - 0.0013 18.2 4.0 0.0087 15.5 0.9 2.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID31958.1 - 0.0014 17.9 0.6 0.26 10.5 0.3 2.2 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 AID31958.1 - 0.0015 17.3 2.2 0.67 8.6 0.6 3.3 4 0 0 4 4 4 1 HI0933-like protein Thi4 PF01946.17 AID31958.1 - 0.0018 17.6 1.6 0.32 10.2 0.1 2.8 2 1 1 3 3 3 2 Thi4 family NAD_binding_9 PF13454.6 AID31958.1 - 0.015 15.2 3.3 0.71 9.9 0.0 3.8 3 1 1 4 4 4 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 AID31958.1 - 0.017 14.0 0.7 0.47 9.3 0.2 2.7 3 0 0 3 3 3 0 Tryptophan halogenase AlaDh_PNT_C PF01262.21 AID31958.1 - 0.019 14.2 0.2 1.1 8.5 0.1 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 AID31958.1 - 0.12 12.6 4.7 1.2 9.4 0.5 2.8 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain Shikimate_DH PF01488.20 AID31958.1 - 0.13 12.4 0.9 6.8 6.8 0.0 2.9 4 0 0 4 4 4 0 Shikimate / quinate 5-dehydrogenase HicB_lk_antitox PF15919.5 AID31958.1 - 0.16 12.1 0.0 0.35 11.0 0.0 1.5 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system FMO-like PF00743.19 AID31958.1 - 0.24 9.8 0.0 0.41 9.0 0.0 1.3 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like HTH_24 PF13412.6 AID31959.1 - 2.5e-21 75.0 0.1 4.7e-21 74.1 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID31959.1 - 1.5e-18 66.4 0.2 2.8e-18 65.4 0.2 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 AID31959.1 - 2.6e-15 56.1 0.0 3.8e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR PF01047.22 AID31959.1 - 1.5e-05 24.8 0.0 6.2e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID31959.1 - 7.4e-05 22.7 0.0 0.00014 21.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID31959.1 - 0.00027 20.8 0.2 0.00059 19.7 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 AID31959.1 - 0.0023 17.8 0.0 0.015 15.3 0.0 2.1 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 AID31959.1 - 0.019 14.8 0.0 0.069 13.0 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_47 PF16221.5 AID31959.1 - 0.024 14.2 0.0 0.049 13.2 0.0 1.5 1 0 0 1 1 1 0 winged helix-turn-helix HTH_CodY PF08222.11 AID31959.1 - 0.07 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_5 PF01022.20 AID31959.1 - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 AID31959.1 - 0.11 12.9 0.0 0.57 10.6 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator HTH_39 PF14090.6 AID31959.1 - 0.14 11.9 0.0 0.4 10.5 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain Glycos_transf_2 PF00535.26 AID31960.1 - 2.4e-13 50.2 0.0 3.6e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 AID31960.1 - 0.00035 21.0 0.0 0.00078 19.9 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 Hydrolase_like PF13242.6 AID31961.1 - 9.6e-10 38.4 0.7 1e-07 31.9 0.0 2.3 2 0 0 2 2 2 1 HAD-hyrolase-like HAD_2 PF13419.6 AID31961.1 - 2.2e-06 27.9 0.2 5.1e-06 26.7 0.0 1.6 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID31961.1 - 2.9e-06 27.7 0.3 1.4e-05 25.4 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 AID31961.1 - 2.7e-05 23.9 0.0 3.4e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase HAD PF12710.7 AID31961.1 - 0.011 16.2 0.0 0.034 14.5 0.0 1.8 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID31961.1 - 0.1 12.7 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase SIS_2 PF13580.6 AID31962.1 - 4.7e-26 91.4 2.6 5.6e-26 91.2 2.6 1.1 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 AID31962.1 - 8e-05 22.5 0.1 0.00034 20.5 0.0 1.9 1 1 0 2 2 2 1 SIS domain Sirohm_synth_M PF14824.6 AID31962.1 - 0.21 11.1 1.2 0.44 10.1 1.2 1.5 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central PfkB PF00294.24 AID31963.1 - 2.5e-39 135.4 2.1 3.6e-39 134.9 2.1 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase CTP_transf_like PF01467.26 AID31963.1 - 1e-13 51.7 0.0 2.4e-13 50.5 0.0 1.6 1 0 0 1 1 1 1 Cytidylyltransferase-like Phos_pyr_kin PF08543.12 AID31963.1 - 0.00036 20.0 0.2 0.0012 18.2 0.1 1.9 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase Pantoate_ligase PF02569.15 AID31963.1 - 0.011 15.0 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase TMP-TENI PF02581.17 AID31963.1 - 0.16 11.3 2.8 0.33 10.2 0.8 2.3 2 1 0 2 2 2 0 Thiamine monophosphate synthase LysE PF01810.18 AID31964.1 - 2.2e-28 99.1 11.9 2.5e-28 98.8 11.9 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 AID31964.1 - 0.063 13.0 4.6 0.056 13.1 2.0 2.1 1 1 1 2 2 2 0 Integral membrane protein TerC family Mntp PF02659.15 AID31964.1 - 0.1 12.4 7.4 0.42 10.4 7.1 2.2 1 1 0 1 1 1 0 Putative manganese efflux pump Pox_I5 PF04713.12 AID31964.1 - 0.23 11.5 2.2 2.2 8.4 0.1 3.0 2 1 1 3 3 3 0 Poxvirus protein I5 Epimerase PF01370.21 AID31965.1 - 9.2e-44 149.7 0.0 1.1e-43 149.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID31965.1 - 2.2e-19 70.1 0.0 3e-19 69.6 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID31965.1 - 2.4e-11 43.2 0.0 3e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID31965.1 - 2.6e-08 33.3 0.0 6.1e-08 32.1 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 AID31965.1 - 0.004 17.1 0.0 0.0065 16.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 AID31965.1 - 0.011 14.8 0.1 0.19 10.9 0.1 2.2 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID31965.1 - 0.036 13.2 0.0 1.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Male sterility protein Glyco_transf_9 PF01075.17 AID31966.1 - 3.2e-57 193.7 0.0 4.2e-57 193.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Glyco_transf_9 PF01075.17 AID31967.1 - 3.2e-44 151.1 0.0 4.9e-44 150.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Glyco_transf_4 PF13439.6 AID31967.1 - 0.07 13.1 0.5 0.44 10.5 0.2 2.1 1 1 1 2 2 2 0 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 AID31967.1 - 0.16 10.8 0.0 0.62 8.9 0.0 1.7 2 0 0 2 2 2 0 UDP-N-acetylglucosamine 2-epimerase GreA_GreB_N PF03449.15 AID31968.1 - 8e-30 102.8 1.7 1.2e-29 102.3 1.7 1.3 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 AID31968.1 - 4.2e-29 100.3 0.6 6.4e-29 99.7 0.6 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term TPR_2 PF07719.17 AID31969.1 - 3.1e-11 42.5 1.1 5e-05 23.1 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID31969.1 - 1.3e-09 38.5 1.2 2.5e-07 31.2 0.2 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 AID31969.1 - 5.2e-09 35.9 0.8 3.3e-05 24.0 0.1 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 AID31969.1 - 6.6e-09 36.2 0.1 3.5e-05 24.2 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID31969.1 - 3.9e-06 27.2 2.8 0.027 15.3 0.0 3.4 2 1 2 4 4 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 AID31969.1 - 1e-05 25.1 2.6 0.0045 16.6 0.1 2.9 2 1 0 2 2 2 2 TPR repeat TPR_12 PF13424.6 AID31969.1 - 2.7e-05 24.4 3.3 0.012 15.8 0.6 2.6 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 AID31969.1 - 0.00015 21.5 4.4 0.076 12.9 0.2 3.6 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 AID31969.1 - 0.00031 20.7 0.4 3.1 8.2 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat CBM_14 PF01607.24 AID31969.1 - 0.016 15.4 0.1 0.026 14.7 0.1 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain TPR_7 PF13176.6 AID31969.1 - 0.021 14.8 2.1 13 6.1 0.0 3.7 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 AID31969.1 - 0.022 14.6 3.5 0.85 9.6 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DBP10CT PF08147.12 AID31969.1 - 0.076 13.3 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 DBP10CT (NUC160) domain TPR_9 PF13371.6 AID31969.1 - 0.084 13.0 0.8 3.4 7.9 0.1 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 AID31969.1 - 0.084 13.2 0.1 13 6.2 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID31969.1 - 0.44 11.3 12.0 2.2 9.2 0.2 3.8 4 1 0 4 4 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 AID31969.1 - 0.65 10.7 4.5 31 5.5 0.1 3.5 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF3775 PF12616.8 AID31970.1 - 1.2e-29 102.2 3.5 1.8e-29 101.6 3.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3775) MgtE_N PF03448.17 AID31970.1 - 0.025 15.2 0.2 0.051 14.2 0.2 1.4 1 0 0 1 1 1 0 MgtE intracellular N domain Extensin-like_C PF06904.12 AID31971.1 - 7.7e-50 169.4 0.0 1e-49 169.0 0.0 1.2 1 0 0 1 1 1 1 Extensin-like protein C-terminus Peptidase_M15_4 PF13539.6 AID31971.1 - 0.03 14.8 0.0 0.06 13.9 0.0 1.5 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase MAPKK1_Int PF08923.10 AID31972.1 - 0.063 13.1 0.0 0.075 12.8 0.0 1.2 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting Extensin-like_C PF06904.12 AID31973.1 - 2.5e-51 174.2 0.0 2.7e-51 174.1 0.0 1.0 1 0 0 1 1 1 1 Extensin-like protein C-terminus ChaC PF04752.12 AID31975.1 - 1.2e-47 162.2 0.0 1.4e-47 162.0 0.0 1.0 1 0 0 1 1 1 1 ChaC-like protein LssY_C PF14067.6 AID31976.1 - 7.1e-68 227.9 0.0 8.8e-68 227.6 0.0 1.1 1 0 0 1 1 1 1 LssY C-terminus DUF21 PF01595.20 AID31977.1 - 3.4e-38 131.1 0.1 4.9e-38 130.6 0.1 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 AID31977.1 - 1.5e-23 82.6 0.1 5.8e-23 80.7 0.0 2.0 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 AID31977.1 - 6.2e-06 26.6 0.6 0.0014 19.0 0.0 2.7 2 0 0 2 2 2 2 CBS domain HlyD_3 PF13437.6 AID31978.1 - 2.3e-15 57.2 0.7 6.7e-14 52.5 0.2 2.5 2 0 0 2 2 2 1 HlyD family secretion protein HlyD PF00529.20 AID31978.1 - 3.9e-10 39.5 0.8 6.9e-10 38.7 0.8 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 AID31978.1 - 2.5e-08 33.4 7.2 9e-08 31.6 1.2 2.6 2 1 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID31978.1 - 3.5e-08 33.1 1.6 6.2e-06 25.9 0.5 3.8 3 0 0 3 3 3 1 Biotin-lipoyl like APG6_N PF17675.1 AID31978.1 - 0.0017 18.8 20.4 0.22 12.1 1.9 3.2 1 1 0 2 2 2 2 Apg6 coiled-coil region Biotin_lipoyl PF00364.22 AID31978.1 - 0.0054 16.5 0.1 1.8 8.5 0.0 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme NPV_P10 PF05531.12 AID31978.1 - 0.01 16.3 1.8 0.01 16.3 1.8 2.6 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Spc7 PF08317.11 AID31978.1 - 0.11 11.3 15.0 0.54 9.1 4.5 2.1 1 1 0 2 2 2 0 Spc7 kinetochore protein Lebercilin PF15619.6 AID31978.1 - 0.54 9.9 16.4 0.51 10.0 13.3 2.3 2 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Phasin PF05597.11 AID31978.1 - 0.75 9.8 7.6 0.28 11.2 3.7 2.2 2 1 1 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) XhlA PF10779.9 AID31978.1 - 0.83 9.9 4.9 1.1 9.5 2.4 2.4 2 1 1 3 3 3 0 Haemolysin XhlA Baculo_PEP_C PF04513.12 AID31978.1 - 1.8 8.6 8.0 1.2 9.2 4.5 2.3 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1690 PF07956.11 AID31978.1 - 2.2 8.7 6.3 1.3 9.5 0.6 2.4 2 1 0 2 2 2 0 Protein of Unknown function (DUF1690) Cep57_CLD_2 PF14197.6 AID31978.1 - 3.1 7.9 12.6 4.9 7.3 0.8 3.3 3 0 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF724 PF05266.14 AID31978.1 - 3.3 7.5 11.5 2.4 8.0 2.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 AID31978.1 - 4.6 7.3 9.8 1.4 8.9 2.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) COG2 PF06148.11 AID31978.1 - 6.2 6.9 8.0 4.1 7.5 0.5 2.4 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 KxDL PF10241.9 AID31978.1 - 9.2 6.6 10.2 0.59 10.5 1.4 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF5082 PF16888.5 AID31978.1 - 9.2 6.6 9.5 0.11 12.8 1.3 1.9 3 0 0 3 3 1 0 Domain of unknown function (DUF5082) ABC_tran PF00005.27 AID31979.1 - 8.6e-33 113.7 0.0 1.5e-32 113.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID31979.1 - 2.3e-09 37.3 10.3 9.7e-09 35.3 10.3 1.8 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 AID31979.1 - 5.3e-05 23.7 0.1 5.3e-05 23.7 0.1 1.9 2 1 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 AID31979.1 - 0.00013 21.3 0.1 0.00029 20.2 0.1 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 AID31979.1 - 0.0019 18.4 1.3 0.003 17.7 0.1 2.1 2 1 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 AID31979.1 - 0.0019 18.1 0.0 0.0042 17.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 AID31979.1 - 0.0019 18.1 0.0 0.22 11.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID31979.1 - 0.0053 17.0 0.1 0.024 14.9 0.0 2.0 3 0 0 3 3 2 1 AAA domain AAA_29 PF13555.6 AID31979.1 - 0.0066 16.2 0.1 0.023 14.4 0.0 1.9 2 0 0 2 2 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID31979.1 - 0.0067 15.9 0.0 0.47 9.8 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 AID31979.1 - 0.019 14.6 1.6 0.49 9.9 0.1 3.3 3 0 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 AID31979.1 - 0.03 14.4 0.0 0.077 13.1 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 AID31979.1 - 0.031 14.0 2.1 0.16 11.7 2.2 2.2 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID31979.1 - 0.034 13.9 0.0 0.082 12.6 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 AID31979.1 - 0.067 13.6 0.0 0.21 12.0 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 AID31979.1 - 0.075 12.0 0.1 0.16 10.9 0.1 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 AID31979.1 - 0.1 13.2 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 AID31979.1 - 0.13 11.9 0.2 0.25 11.1 0.2 1.4 1 0 0 1 1 1 0 Cytidylate kinase Wzy_C PF04932.15 AID31979.1 - 6.4 6.4 9.1 0.18 11.4 1.4 2.1 2 0 0 2 2 2 0 O-Antigen ligase Glyco_hydro_16 PF00722.21 AID31980.1 - 4e-30 104.6 0.0 8.4e-30 103.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 SKN1 PF03935.15 AID31980.1 - 2.8e-12 45.8 0.8 5.3e-08 31.7 0.8 2.2 2 0 0 2 2 2 2 Beta-glucan synthesis-associated protein (SKN1) HemolysinCabind PF00353.19 AID31980.1 - 0.0014 18.5 27.7 0.0049 16.8 4.0 4.9 3 2 1 4 4 4 3 RTX calcium-binding nonapeptide repeat (4 copies) MBD PF01429.19 AID31980.1 - 0.15 11.8 0.0 0.31 10.8 0.0 1.5 1 0 0 1 1 1 0 Methyl-CpG binding domain EamA PF00892.20 AID31982.1 - 3e-17 63.1 46.0 8.4e-09 35.7 19.2 2.7 2 1 1 3 3 3 2 EamA-like transporter family PadR PF03551.14 AID31983.1 - 9.1e-19 67.2 0.1 1.4e-18 66.6 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TrmB PF01978.19 AID31983.1 - 0.02 14.8 0.1 0.039 13.8 0.1 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 AID31983.1 - 0.033 14.5 0.0 0.044 14.1 0.0 1.4 1 1 0 1 1 1 0 Penicillinase repressor HxlR PF01638.17 AID31983.1 - 0.045 13.6 0.1 0.1 12.5 0.0 1.8 1 1 1 2 2 2 0 HxlR-like helix-turn-helix DUF1048 PF06304.11 AID31984.1 - 4.4e-28 97.7 0.1 5.2e-28 97.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1048) YCII PF03795.14 AID31985.1 - 4.1e-29 100.8 0.0 4.9e-29 100.6 0.0 1.1 1 0 0 1 1 1 1 YCII-related domain Paramyx_P_V_C PF03210.13 AID31985.1 - 0.22 11.3 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal Sigma70_r2 PF04542.14 AID31986.1 - 2.8e-10 39.8 1.1 6.5e-10 38.6 1.1 1.7 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID31986.1 - 4.9e-10 38.9 0.4 1.1e-09 37.8 0.4 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID31986.1 - 1.2e-05 24.7 0.2 1.2e-05 24.7 0.2 2.7 3 0 0 3 3 3 1 Sigma-70, region 4 TPR_2 PF07719.17 AID31986.1 - 0.00039 20.3 0.2 0.0029 17.6 0.2 2.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_21 PF09976.9 AID31986.1 - 0.0042 16.8 0.1 0.009 15.7 0.1 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_8 PF13181.6 AID31986.1 - 0.012 15.8 1.3 0.036 14.3 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 AID31986.1 - 0.025 14.7 1.6 0.025 14.7 1.6 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat Sigma70_ECF PF07638.11 AID31986.1 - 0.044 13.7 0.5 0.084 12.7 0.5 1.4 1 0 0 1 1 1 0 ECF sigma factor TPR_19 PF14559.6 AID31986.1 - 0.39 11.3 5.0 20 5.8 1.0 3.3 2 0 0 2 2 2 0 Tetratricopeptide repeat MFS_1 PF07690.16 AID31987.1 - 1.6e-44 152.3 45.3 1.6e-44 152.3 45.3 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID31987.1 - 0.83 8.4 33.5 0.31 9.9 14.6 3.5 1 1 2 3 3 3 0 Sugar (and other) transporter HlyD_3 PF13437.6 AID31988.1 - 6.8e-21 75.0 4.7 6.1e-16 59.0 0.1 2.8 2 1 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID31988.1 - 3.3e-19 69.0 3.3 4.1e-17 62.1 3.3 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID31988.1 - 1.1e-15 57.2 3.4 2.3e-13 49.7 0.3 3.5 3 0 0 3 3 3 2 Biotin-lipoyl like HlyD PF00529.20 AID31988.1 - 3.3e-06 26.9 9.8 4.9e-06 26.3 9.8 1.3 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 AID31988.1 - 0.00081 19.2 0.0 0.043 13.6 0.0 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme DUF4407 PF14362.6 AID31988.1 - 0.34 10.2 13.7 0.64 9.3 13.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FliJ PF02050.16 AID31988.1 - 1.2 9.3 13.1 3 8.1 7.8 2.2 1 1 1 2 2 2 0 Flagellar FliJ protein HrpB7 PF09486.10 AID31988.1 - 4.2 7.7 24.1 14 6.1 24.0 1.7 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Atg14 PF10186.9 AID31988.1 - 4.6 6.2 9.4 2.4 7.2 6.6 1.7 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 HxlR PF01638.17 AID31989.1 - 1.9e-18 66.1 0.0 7.8e-18 64.1 0.0 1.8 2 0 0 2 2 2 1 HxlR-like helix-turn-helix B-block_TFIIIC PF04182.12 AID31989.1 - 0.037 14.2 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC ADH_zinc_N PF00107.26 AID31990.1 - 1.9e-26 92.5 0.2 2.5e-26 92.2 0.2 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID31990.1 - 2.6e-21 77.1 0.8 3.6e-21 76.6 0.0 1.6 2 1 0 2 2 2 1 Zinc-binding dehydrogenase HxlR PF01638.17 AID31991.1 - 5e-32 109.6 0.0 6.6e-32 109.2 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 AID31991.1 - 0.019 14.8 0.0 0.044 13.6 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID31991.1 - 0.067 13.3 0.4 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain Lactamase_B PF00753.27 AID31992.1 - 2.3e-19 70.2 6.3 3.3e-19 69.7 6.3 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID31992.1 - 0.0001 21.9 0.6 0.00017 21.2 0.6 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 AID31992.1 - 0.02 14.0 0.0 0.045 12.9 0.0 1.5 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II Oxidored_molyb PF00174.19 AID31994.1 - 1.4e-47 161.5 0.0 3.7e-47 160.1 0.0 1.6 2 0 0 2 2 2 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 AID31994.1 - 3e-07 30.5 0.5 5.8e-07 29.6 0.5 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain CHAD PF05235.14 AID31995.1 - 0.0094 15.9 0.4 0.0094 15.9 0.4 1.1 1 0 0 1 1 1 1 CHAD domain NIPSNAP PF07978.13 AID31995.1 - 0.09 13.0 0.4 0.097 12.9 0.4 1.0 1 0 0 1 1 1 0 NIPSNAP FMN_red PF03358.15 AID31996.1 - 2.9e-13 49.9 0.0 3.6e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID31996.1 - 0.00079 19.2 0.0 0.00099 18.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold HxlR PF01638.17 AID31997.1 - 9.2e-28 95.9 0.0 1.2e-27 95.5 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 AID31997.1 - 0.00054 19.8 0.0 0.0013 18.6 0.0 1.6 1 0 0 1 1 1 1 MarR family PadR PF03551.14 AID31997.1 - 0.0044 16.9 0.0 0.0068 16.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR_2 PF12802.7 AID31997.1 - 0.053 13.4 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_20 PF12840.7 AID31997.1 - 0.059 13.4 0.0 0.13 12.3 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain 4HBT PF03061.22 AID31999.1 - 8.3e-19 67.7 0.2 1.2e-18 67.2 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 AID31999.1 - 0.0065 16.7 0.0 0.0081 16.4 0.0 1.2 1 0 0 1 1 1 1 Thioesterase-like superfamily SAICAR_synt PF01259.18 AID32000.1 - 2.1e-78 263.5 0.0 2.6e-78 263.1 0.0 1.1 1 0 0 1 1 1 1 SAICAR synthetase GMC_oxred_N PF00732.19 AID32002.1 - 3.5e-87 292.5 0.0 4.5e-87 292.2 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID32002.1 - 9.4e-38 130.0 0.1 1.4e-37 129.4 0.1 1.3 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID32002.1 - 9.7e-05 21.6 0.9 0.28 10.2 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 AID32002.1 - 0.00013 21.7 0.3 0.0014 18.2 0.3 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID32002.1 - 0.0023 18.1 0.9 0.007 16.6 0.9 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID32002.1 - 0.015 14.6 0.0 0.61 9.3 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID32002.1 - 0.036 13.1 0.0 0.059 12.4 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein MR_MLE_C PF13378.6 AID32003.1 - 7.4e-64 215.3 0.1 1.2e-63 214.6 0.1 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID32003.1 - 2.5e-15 56.7 0.0 4.5e-15 55.9 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NAD_binding_2 PF03446.15 AID32004.1 - 9.7e-35 120.1 0.6 1.7e-34 119.3 0.6 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 AID32004.1 - 2.4e-27 95.6 0.9 2.4e-27 95.6 0.9 1.8 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 AID32004.1 - 0.00012 22.6 0.2 0.00026 21.5 0.2 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 AID32004.1 - 0.0018 18.2 0.3 0.0038 17.1 0.2 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID32004.1 - 0.0038 17.5 0.0 0.007 16.6 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 AID32004.1 - 0.0063 16.2 0.1 0.013 15.1 0.1 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 AID32004.1 - 0.0085 15.7 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAGK_cat PF00781.24 AID32005.1 - 2.6e-29 101.4 0.1 3.8e-29 100.9 0.1 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 AID32005.1 - 0.00024 20.4 0.1 0.00037 19.8 0.1 1.2 1 0 0 1 1 1 1 ATP-NAD kinase T2SSC PF11356.8 AID32005.1 - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Type II secretion system protein C DUF4383 PF14325.6 AID32007.1 - 2.5e-06 27.8 12.9 2.7e-05 24.5 12.9 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4383) DUF5111 PF17138.4 AID32008.1 - 0.068 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5111) LBP_C PF17386.2 AID32011.1 - 0.07 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase C-terminal domain DJ-1_PfpI PF01965.24 AID32011.1 - 0.15 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family FAD_binding_4 PF01565.23 AID32012.1 - 1.5e-27 96.1 0.2 1.5e-27 96.1 0.2 1.6 2 0 0 2 2 2 1 FAD binding domain ALO PF04030.14 AID32012.1 - 2.3e-05 24.3 0.0 2.8e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase T4_tail_cap PF11091.8 AID32012.1 - 0.16 10.8 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 Tail-tube assembly protein DUF1344 PF07076.11 AID32013.1 - 5e-23 80.8 1.6 5.9e-23 80.6 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1344) CusF_Ec PF11604.8 AID32013.1 - 8.4e-06 25.7 0.8 0.0016 18.4 0.8 2.1 1 1 0 1 1 1 1 Copper binding periplasmic protein CusF PQQ_3 PF13570.6 AID32013.1 - 0.0093 16.4 0.1 0.41 11.2 0.1 2.5 1 1 1 2 2 2 1 PQQ-like domain CHB_HEX PF03173.13 AID32013.1 - 0.14 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative carbohydrate binding domain DUF2314 PF10077.9 AID32014.1 - 1.6e-31 109.2 0.0 2.1e-31 108.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2314) DUF3137 PF11335.8 AID32015.1 - 6.6e-11 42.3 0.0 1e-10 41.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3137) Bax1-I PF01027.20 AID32015.1 - 0.023 14.6 0.5 0.036 13.9 0.5 1.2 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 CrgA PF06781.12 AID32015.1 - 0.19 11.8 0.9 1 9.5 1.0 2.0 1 1 1 2 2 2 0 Cell division protein CrgA PGA_cap PF09587.10 AID32016.1 - 2.7e-37 128.6 0.4 1.8e-36 125.9 0.4 1.9 1 1 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Penicil_amidase PF01804.18 AID32018.1 - 0.12 11.4 0.5 0.14 11.1 0.5 1.0 1 0 0 1 1 1 0 Penicillin amidase Pox_P21 PF05313.12 AID32018.1 - 0.43 10.1 3.5 0.48 10.0 3.5 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein DUF4231 PF14015.6 AID32018.1 - 5.6 7.5 8.0 5.7 7.5 5.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Spermine_synth PF01564.17 AID32020.1 - 0.098 12.1 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain PCMT PF01135.19 AID32021.1 - 2.5e-38 131.9 0.0 3.2e-38 131.6 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 AID32021.1 - 0.00033 19.8 0.0 0.00066 18.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 AID32021.1 - 0.0023 18.6 0.0 0.0079 16.9 0.0 1.9 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32021.1 - 0.0038 17.1 0.0 0.0081 16.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain TAT_signal PF10518.9 AID32021.1 - 0.029 14.2 1.8 0.047 13.5 1.8 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 AID32021.1 - 0.15 11.4 0.3 0.37 10.2 0.3 1.7 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GCD14 PF08704.10 AID32021.1 - 0.18 11.4 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF2778 PF10908.8 AID32022.1 - 4.6e-23 81.8 0.0 7.5e-23 81.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2778) UvrB_inter PF17757.1 AID32023.1 - 6.4e-30 103.2 0.3 3.8e-29 100.7 0.1 2.3 2 0 0 2 2 2 1 UvrB interaction domain UvrB PF12344.8 AID32023.1 - 2.4e-20 72.1 0.9 3.3e-19 68.4 0.2 2.5 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.31 AID32023.1 - 1.2e-17 64.3 0.1 2.8e-17 63.1 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 AID32023.1 - 4.1e-13 49.7 0.1 1.9e-12 47.5 0.0 2.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.19 AID32023.1 - 9.3e-10 37.9 6.5 2.7e-09 36.4 6.5 1.9 1 0 0 1 1 1 1 UvrB/uvrC motif DEAD PF00270.29 AID32023.1 - 1.5e-05 24.9 0.0 4.6e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_30 PF13604.6 AID32023.1 - 5e-05 23.1 0.0 0.00041 20.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain N36 PF11438.8 AID32023.1 - 0.00096 18.9 1.1 0.7 9.8 0.7 3.4 2 0 0 2 2 2 1 36-mer N-terminal peptide of the N protein (N36) Microtub_bd PF16796.5 AID32023.1 - 0.016 15.2 0.1 0.073 13.0 0.0 2.1 3 0 0 3 3 3 0 Microtubule binding Kinesin PF00225.23 AID32023.1 - 0.023 13.7 0.0 0.037 12.9 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain SWI2_SNF2 PF18766.1 AID32023.1 - 0.042 13.5 0.0 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 SWI2/SNF2 ATPase AAA_22 PF13401.6 AID32023.1 - 0.057 13.7 0.0 0.35 11.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 AID32023.1 - 0.076 13.1 0.2 0.3 11.1 0.0 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain eIF3_p135 PF12807.7 AID32023.1 - 0.14 12.2 0.1 0.66 10.0 0.0 2.0 2 0 0 2 2 2 0 Translation initiation factor eIF3 subunit 135 EamA PF00892.20 AID32024.1 - 2.8e-23 82.6 43.8 6.9e-14 52.2 15.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family ABC_tran PF00005.27 AID32025.1 - 1.1e-35 123.1 0.0 8.1e-21 75.0 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID32025.1 - 4.8e-16 59.4 3.5 2.6e-07 30.8 0.0 4.2 3 1 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32025.1 - 2e-08 34.0 0.5 0.0062 16.0 0.0 4.1 3 1 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID32025.1 - 9.3e-05 22.9 5.6 0.11 12.8 0.0 3.4 1 1 1 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 AID32025.1 - 0.0004 20.4 0.0 0.63 10.1 0.0 2.8 2 1 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID32025.1 - 0.0017 18.3 0.3 1.2 9.0 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase SbcCD_C PF13558.6 AID32025.1 - 0.0025 18.0 0.1 0.84 9.9 0.0 3.3 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 AID32025.1 - 0.0051 17.3 0.5 1.2 9.6 0.1 3.1 3 0 0 3 3 3 1 AAA domain RNA_helicase PF00910.22 AID32025.1 - 0.0076 16.6 0.0 0.42 11.0 0.0 2.3 2 0 0 2 2 2 1 RNA helicase AAA_25 PF13481.6 AID32025.1 - 0.0084 15.7 0.4 4.9 6.7 0.2 2.6 2 1 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.25 AID32025.1 - 0.015 15.0 0.2 6.7 6.3 0.0 2.6 3 0 0 3 3 3 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_29 PF13555.6 AID32025.1 - 0.016 14.9 0.1 6.2 6.7 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain DUF87 PF01935.17 AID32025.1 - 0.018 15.2 0.1 6.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_22 PF13401.6 AID32025.1 - 0.024 14.9 0.0 16 5.8 0.0 2.9 2 1 0 2 2 2 0 AAA domain MeaB PF03308.16 AID32025.1 - 0.029 13.3 0.9 1.3 7.9 0.2 2.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 AID32025.1 - 0.034 14.1 0.4 3.2 7.6 0.0 3.2 2 1 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 AID32025.1 - 0.17 11.6 0.0 6.3 6.5 0.0 2.8 3 0 0 3 3 3 0 AAA domain HigB-like_toxin PF05015.13 AID32026.1 - 3.3e-20 72.3 0.0 3.7e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 RelE-like toxin of type II toxin-antitoxin system HigB YoeB_toxin PF06769.14 AID32026.1 - 0.009 16.0 0.0 0.016 15.3 0.0 1.4 2 0 0 2 2 2 1 YoeB-like toxin of bacterial type II toxin-antitoxin system HTH_3 PF01381.22 AID32027.1 - 6.2e-07 29.4 0.0 9.6e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID32027.1 - 0.0052 17.1 0.0 0.0099 16.2 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain DUF1127 PF06568.11 AID32028.1 - 0.0015 18.2 0.1 0.0031 17.2 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1127) Glyoxalase PF00903.25 AID32030.1 - 1.6e-15 57.5 0.1 1.8e-15 57.2 0.1 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3-dmu-9_3-mt PF06983.13 AID32030.1 - 6.7e-05 23.4 0.0 9.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Glyoxalase_6 PF18029.1 AID32030.1 - 0.0001 23.0 0.4 0.00017 22.4 0.4 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain DUF1428 PF07237.11 AID32031.1 - 6e-43 145.2 0.0 6.9e-43 145.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) Sulfotransfer_3 PF13469.6 AID32032.1 - 1.2e-38 133.7 0.4 7.1e-38 131.2 0.1 2.4 2 1 0 2 2 1 1 Sulfotransferase family TPR_2 PF07719.17 AID32032.1 - 7e-29 97.6 3.2 3.2e-05 23.7 0.0 7.5 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_16 PF13432.6 AID32032.1 - 7e-26 90.6 21.7 5.6e-11 42.9 0.2 5.7 5 1 1 6 6 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 AID32032.1 - 2.4e-25 86.6 0.0 0.018 15.2 0.0 7.5 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_12 PF13424.6 AID32032.1 - 4.1e-23 81.5 10.3 4.6e-08 33.2 0.7 6.1 2 1 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 AID32032.1 - 2.7e-22 77.5 26.2 1.4e-05 25.5 0.1 8.4 4 3 5 9 9 8 5 Tetratricopeptide repeat TPR_1 PF00515.28 AID32032.1 - 1.6e-20 72.0 0.1 0.0075 16.1 0.0 7.3 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 AID32032.1 - 1.7e-20 73.2 13.0 3.6e-07 30.6 0.1 4.8 4 1 1 5 5 4 4 Tetratricopeptide repeat TPR_10 PF13374.6 AID32032.1 - 3.8e-19 67.9 19.8 0.00037 20.3 0.1 7.7 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.6 AID32032.1 - 8.7e-16 57.3 0.0 0.00056 19.5 0.0 5.7 3 1 2 5 5 5 3 TPR repeat TPR_17 PF13431.6 AID32032.1 - 2.4e-14 52.6 0.0 0.0053 17.0 0.0 6.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 AID32032.1 - 1.1e-13 50.1 7.9 0.013 15.5 0.0 6.5 6 1 1 7 7 6 4 Tetratricopeptide repeat Sulfotransfer_1 PF00685.27 AID32032.1 - 2.6e-12 46.8 0.0 8e-11 41.9 0.0 2.3 1 1 0 1 1 1 1 Sulfotransferase domain TPR_4 PF07721.14 AID32032.1 - 4.6e-11 42.2 25.5 0.00021 21.6 2.1 6.6 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_6 PF13174.6 AID32032.1 - 8.2e-11 41.8 4.9 0.42 11.4 0.0 7.6 8 0 0 8 8 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 AID32032.1 - 2.1e-08 34.3 0.0 0.013 15.7 0.0 3.6 2 1 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 AID32032.1 - 7.8e-08 31.9 6.0 0.00055 19.2 0.1 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_20 PF14561.6 AID32032.1 - 2.7e-06 27.6 10.7 1.9 8.8 0.3 5.6 3 2 3 6 6 6 3 Tetratricopeptide repeat TPPII_N PF12583.8 AID32032.1 - 1.1e-05 26.1 0.1 0.72 10.4 0.0 3.3 3 0 0 3 3 3 2 Tripeptidyl peptidase II N terminal TPR_3 PF07720.12 AID32032.1 - 1.1e-05 25.3 0.6 2 8.5 0.0 5.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_9 PF13371.6 AID32032.1 - 1.6e-05 24.9 8.5 0.029 14.5 0.3 3.7 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_5 PF12688.7 AID32032.1 - 3.5e-05 24.0 7.5 0.25 11.6 0.4 4.4 1 1 1 3 3 3 3 Tetratrico peptide repeat BTAD PF03704.17 AID32032.1 - 5.1e-05 23.7 8.5 0.083 13.3 0.5 4.1 2 1 2 4 4 4 2 Bacterial transcriptional activator domain PPR PF01535.20 AID32032.1 - 0.00012 22.1 3.3 12 6.4 0.0 5.4 6 0 0 6 6 6 0 PPR repeat NARP1 PF12569.8 AID32032.1 - 0.00012 21.1 0.0 0.047 12.6 0.0 3.5 1 1 2 3 3 3 1 NMDA receptor-regulated protein 1 Coatomer_E PF04733.14 AID32032.1 - 0.0017 17.8 0.1 0.029 13.8 0.0 2.4 2 1 0 2 2 2 1 Coatomer epsilon subunit HrpB1_HrpK PF09613.10 AID32032.1 - 0.0036 16.9 3.1 0.019 14.6 0.7 2.3 2 0 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) Sulfotransfer_4 PF17784.1 AID32032.1 - 0.0082 16.0 0.0 0.03 14.2 0.0 1.8 1 1 0 1 1 1 1 Sulfotransferase domain PPR_1 PF12854.7 AID32032.1 - 0.03 14.0 7.5 1.4 8.7 0.2 3.5 4 0 0 4 4 4 0 PPR repeat DUF4326 PF14216.6 AID32032.1 - 0.14 12.9 0.0 2.2 9.1 0.0 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4326) CSD PF00313.22 AID32034.1 - 3.5e-22 78.0 0.1 3.7e-22 77.9 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID32034.1 - 0.00021 20.9 0.2 0.00031 20.4 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF1918 PF08940.11 AID32036.1 - 0.037 13.7 0.0 0.063 12.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1918) EAL PF00563.20 AID32039.1 - 6.8e-68 228.7 0.0 9.6e-68 228.2 0.0 1.2 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 AID32039.1 - 5.3e-31 107.7 0.0 8.7e-31 107.0 0.0 1.3 1 0 0 1 1 1 1 CSS motif domain associated with EAL DDE_Tnp_ISAZ013 PF07592.11 AID32040.1 - 3.5e-140 466.3 0.0 4.1e-140 466.1 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain Kazal_1 PF00050.21 AID32041.1 - 3.1e-08 33.5 5.7 4.2e-05 23.5 0.4 2.8 2 2 0 2 2 2 2 Kazal-type serine protease inhibitor domain Kazal_2 PF07648.15 AID32041.1 - 1.2e-07 31.8 2.9 0.0011 19.1 0.4 2.5 2 1 0 2 2 2 2 Kazal-type serine protease inhibitor domain SSI PF00720.17 AID32041.1 - 0.0017 18.3 0.4 1.1 9.3 0.0 2.3 2 1 0 2 2 2 2 Subtilisin inhibitor-like CSD PF00313.22 AID32042.1 - 4.5e-25 87.3 0.1 4.9e-25 87.2 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID32042.1 - 3.1e-05 23.5 1.1 6e-05 22.6 1.1 1.6 1 1 0 1 1 1 1 Ribonuclease B OB domain Rho_RNA_bind PF07497.12 AID32042.1 - 0.03 14.2 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain CSD PF00313.22 AID32043.1 - 3.9e-24 84.3 0.2 4.5e-24 84.1 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID32043.1 - 2.5e-06 27.1 1.3 3.3e-06 26.7 0.3 1.6 2 0 0 2 2 2 1 Ribonuclease B OB domain BA14K PF07886.11 AID32044.1 - 2.2e-13 49.8 5.9 6.1e-13 48.4 5.9 1.8 1 0 0 1 1 1 1 BA14K-like protein TauE PF01925.19 AID32044.1 - 0.044 13.4 0.3 0.056 13.1 0.3 1.1 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE Lactamase_B PF00753.27 AID32045.1 - 1.1e-31 110.4 7.6 1.2e-31 110.2 7.6 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID32045.1 - 2.2e-05 24.1 0.2 2.8e-05 23.7 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 AID32045.1 - 0.091 12.7 0.3 0.11 12.4 0.3 1.3 1 1 0 1 1 1 0 Beta-lactamase superfamily domain SpoV PF08183.11 AID32046.1 - 1.5 8.9 8.7 9.1 6.3 0.3 3.1 2 1 0 2 2 2 0 Stage V sporulation protein family Aminotran_4 PF01063.19 AID32047.1 - 1.2e-49 169.2 0.0 1.3e-49 169.0 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV MarR_2 PF12802.7 AID32048.1 - 3.1e-13 49.4 0.3 6.4e-13 48.4 0.3 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID32048.1 - 4.6e-07 29.7 0.1 9.3e-07 28.7 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID32048.1 - 9.2e-07 29.3 0.1 1.8e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 AID32048.1 - 0.0038 16.8 0.2 0.015 14.8 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 AID32048.1 - 0.01 15.9 2.9 0.12 12.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 AID32048.1 - 0.082 12.8 0.0 0.18 11.7 0.0 1.6 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Response_reg PF00072.24 AID32049.1 - 8.2e-29 100.0 0.0 1.3e-28 99.4 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID32049.1 - 7.4e-19 67.6 0.1 1.7e-18 66.5 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal GerE PF00196.19 AID32049.1 - 0.067 12.7 0.0 0.32 10.6 0.0 2.1 1 1 0 1 1 1 0 Bacterial regulatory proteins, luxR family HATPase_c PF02518.26 AID32050.1 - 3.2e-19 69.5 0.0 5.6e-19 68.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID32050.1 - 2.5e-05 24.6 0.5 8.2e-05 22.9 0.5 2.0 1 0 0 1 1 1 1 HAMP domain HisKA PF00512.25 AID32050.1 - 0.0026 17.8 0.2 0.013 15.5 0.1 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain TMF_TATA_bd PF12325.8 AID32050.1 - 0.063 13.5 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding HATPase_c_2 PF13581.6 AID32050.1 - 0.073 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID32050.1 - 0.17 11.7 0.0 0.32 10.8 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glycos_transf_1 PF00534.20 AID32051.1 - 2.2e-19 69.6 0.0 6.1e-19 68.2 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID32051.1 - 5.9e-18 65.6 0.0 1.5e-17 64.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID32051.1 - 8.9e-14 51.8 2.0 3.1e-13 50.1 0.6 2.5 3 1 0 3 3 3 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 AID32051.1 - 5.5e-06 26.9 1.5 5.5e-06 26.9 1.5 2.0 3 0 0 3 3 3 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 AID32051.1 - 0.018 15.4 0.0 0.054 13.9 0.0 1.9 1 1 0 1 1 1 0 Glycosyl transferases group 1 tRNA_bind PF01588.20 AID32053.1 - 8.3e-12 45.1 0.0 9.4e-12 44.9 0.0 1.1 1 0 0 1 1 1 1 Putative tRNA binding domain YbjN PF10722.9 AID32054.1 - 1.2e-30 106.1 0.5 1.5e-30 105.9 0.5 1.1 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator BMFP PF04380.13 AID32055.1 - 8.8e-26 90.2 5.7 8.8e-26 90.2 5.7 1.7 2 0 0 2 2 2 1 Membrane fusogenic activity Phasin PF05597.11 AID32055.1 - 0.00047 20.2 1.3 0.01 15.9 1.3 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF2353 PF09789.9 AID32055.1 - 0.03 13.7 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) Uso1_p115_C PF04871.13 AID32055.1 - 0.035 14.5 1.1 0.04 14.3 1.1 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Sec2p PF06428.11 AID32055.1 - 0.29 11.1 4.4 0.45 10.5 4.4 1.4 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p ParD_antitoxin PF03693.14 AID32056.1 - 3.8e-11 43.2 0.3 4.9e-11 42.9 0.3 1.3 1 1 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ParE_toxin PF05016.15 AID32057.1 - 2.1e-06 28.3 0.0 2.1e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE BrnA_antitoxin PF14384.6 AID32058.1 - 2.5e-13 50.3 0.0 2.9e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 BrnA antitoxin of type II toxin-antitoxin system LGT PF01790.18 AID32059.1 - 1.1e-77 260.5 6.0 1.3e-77 260.3 6.0 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase Methyltransf_28 PF02636.17 AID32060.1 - 4.9e-64 216.5 0.0 5.8e-64 216.3 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF3666 PF12408.8 AID32060.1 - 0.13 11.5 0.1 0.36 10.1 0.1 1.7 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase Pox_A_type_inc PF04508.12 AID32060.1 - 0.3 11.0 0.7 0.49 10.3 0.1 1.6 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Cu-oxidase_4 PF02578.15 AID32061.1 - 9.6e-68 228.2 0.0 1.1e-67 228.0 0.0 1.0 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase Peptidase_M24 PF00557.24 AID32062.1 - 6.1e-26 91.4 0.1 8.7e-26 90.9 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID32062.1 - 2.6e-22 79.9 0.0 4.8e-22 79.0 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Pribosyltran_N PF13793.6 AID32064.1 - 1.9e-52 176.1 0.1 2.2e-50 169.4 0.0 2.3 2 0 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 AID32064.1 - 5.3e-22 78.7 1.4 2.5e-21 76.5 0.2 2.0 1 1 1 2 2 2 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 AID32064.1 - 1.6e-19 69.9 1.7 1.1e-18 67.2 0.6 2.1 2 0 0 2 2 2 1 Phosphoribosyl transferase domain TctC PF03401.14 AID32065.1 - 2.9e-88 295.5 0.2 3.4e-88 295.3 0.2 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor SPDY PF03771.16 AID32065.1 - 9.9 6.2 8.5 70 3.5 0.2 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF317) HTH_18 PF12833.7 AID32066.1 - 1e-19 70.5 0.1 1.9e-19 69.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32066.1 - 3.3e-12 46.2 0.0 1e-06 28.7 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID32066.1 - 3e-08 33.7 0.1 5.4e-08 32.8 0.1 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_2 PF07883.11 AID32066.1 - 1.5e-05 24.7 0.8 2.4e-05 24.0 0.8 1.3 1 0 0 1 1 1 1 Cupin domain MFS_1 PF07690.16 AID32067.1 - 2.8e-28 98.9 53.0 1.2e-16 60.7 22.5 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 AID32067.1 - 0.3 9.3 10.5 1.2 7.4 2.8 2.4 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family SnoaL_2 PF12680.7 AID32068.1 - 2.4e-05 24.9 0.0 2.9e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain PRP4 PF08799.11 AID32068.1 - 0.13 11.9 0.3 0.18 11.4 0.3 1.3 1 0 0 1 1 1 0 pre-mRNA processing factor 4 (PRP4) like Ribosomal_L2 PF00181.23 AID32068.1 - 0.19 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal Proteins L2, RNA binding domain Hydrolase_4 PF12146.8 AID32069.1 - 3.2e-06 26.6 0.0 4.2e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID32069.1 - 9.1e-06 25.3 0.0 9.1e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 AID32069.1 - 0.00034 20.3 0.0 0.00043 20.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 AID32069.1 - 0.0029 17.5 0.0 0.0036 17.2 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 AID32069.1 - 0.0031 17.1 0.0 0.0042 16.7 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family LIP PF03583.14 AID32069.1 - 0.053 12.8 0.0 0.065 12.5 0.0 1.2 1 0 0 1 1 1 0 Secretory lipase MarR PF01047.22 AID32070.1 - 3e-16 59.1 0.0 7.1e-16 57.9 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID32070.1 - 1.3e-15 57.0 0.4 9.4e-15 54.3 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID32070.1 - 1.3e-10 41.6 0.1 2.5e-10 40.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID32070.1 - 2.7e-06 27.1 1.1 6.6e-06 25.8 0.3 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID32070.1 - 8.9e-06 25.2 0.0 6.5e-05 22.4 0.0 2.2 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 AID32070.1 - 7e-05 22.8 0.7 0.00034 20.6 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 AID32070.1 - 0.00014 22.0 0.0 0.00023 21.3 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 AID32070.1 - 0.00093 19.0 0.0 0.0016 18.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 AID32070.1 - 0.0063 16.6 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.9 AID32070.1 - 0.028 14.5 0.0 0.044 13.9 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) PadR PF03551.14 AID32070.1 - 0.031 14.2 0.0 0.053 13.5 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_Crp_2 PF13545.6 AID32070.1 - 0.036 14.0 0.6 0.18 11.8 0.1 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_47 PF16221.5 AID32070.1 - 0.038 13.5 0.0 0.073 12.6 0.0 1.5 1 0 0 1 1 1 0 winged helix-turn-helix FeoC PF09012.10 AID32070.1 - 0.052 13.6 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator Penicillinase_R PF03965.16 AID32070.1 - 0.053 13.9 0.1 0.17 12.2 0.0 1.8 2 0 0 2 2 2 0 Penicillinase repressor HxlR PF01638.17 AID32070.1 - 0.054 13.3 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Rrf2 PF02082.20 AID32070.1 - 0.081 13.3 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator TFIIE_alpha PF02002.17 AID32070.1 - 0.14 12.0 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit Ribosomal_TL5_C PF14693.6 AID32072.1 - 7.7e-30 103.1 0.2 1.8e-29 101.9 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein TL5, C-terminal domain Ribosomal_L25p PF01386.19 AID32072.1 - 2e-23 82.7 0.0 3.6e-23 81.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal L25p family Pept_tRNA_hydro PF01195.19 AID32073.1 - 1.6e-52 177.9 0.0 2.1e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase YchF-GTPase_C PF06071.13 AID32074.1 - 1.3e-40 137.5 1.2 2e-40 136.8 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 AID32074.1 - 2.3e-24 85.7 0.0 5.5e-24 84.4 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 AID32074.1 - 1.5e-08 34.3 0.9 7.2e-08 32.1 0.0 2.5 3 1 0 3 3 3 1 Ferrous iron transport protein B CorA PF01544.18 AID32075.1 - 3.4e-53 180.9 0.1 4.1e-53 180.6 0.1 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Halogen_Hydrol PF10112.9 AID32075.1 - 0.063 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein MaoC_dehydratas PF01575.19 AID32077.1 - 1.3e-14 53.8 0.0 1.9e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID32077.1 - 3.5e-05 23.9 0.0 8.1e-05 22.8 0.0 1.6 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase MaoC_dehydratas PF01575.19 AID32078.1 - 2.5e-08 33.5 0.0 1.5e-07 31.1 0.0 1.9 1 1 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID32078.1 - 0.14 12.3 0.0 0.56 10.3 0.0 1.9 1 1 0 1 1 1 0 N-terminal half of MaoC dehydratase Pribosyltran PF00156.27 AID32079.1 - 2.9e-16 59.4 0.1 4e-16 58.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID32079.1 - 3.6e-05 23.3 0.0 5.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 AID32079.1 - 0.023 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase FGGY_C PF02782.16 AID32079.1 - 0.14 11.9 0.0 0.49 10.1 0.0 1.8 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain FMN_dh PF01070.18 AID32080.1 - 5.5e-127 423.6 0.0 6.2e-127 423.4 0.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 AID32080.1 - 2.1e-05 23.7 4.7 0.00023 20.3 0.7 2.6 1 1 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 AID32080.1 - 0.00028 20.1 0.2 0.00045 19.5 0.2 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase NMO PF03060.15 AID32080.1 - 0.00031 20.3 0.8 0.00046 19.7 0.8 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 AID32080.1 - 0.007 15.8 0.5 0.18 11.2 0.2 2.2 1 1 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 AID32080.1 - 0.034 13.3 0.2 0.078 12.2 0.2 1.6 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase ThiG PF05690.14 AID32080.1 - 0.053 12.8 0.9 0.33 10.2 0.7 2.1 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG PAP2 PF01569.21 AID32081.1 - 5.3e-15 55.4 0.0 7.8e-15 54.8 0.0 1.2 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 AID32081.1 - 0.082 12.6 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 PAP2 superfamily Cytochrom_C1 PF02167.15 AID32082.1 - 4.1e-99 330.7 0.0 5.2e-99 330.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 AID32082.1 - 0.011 16.0 0.0 0.027 14.8 0.0 1.7 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 AID32082.1 - 0.046 14.9 0.2 0.11 13.6 0.1 1.8 2 1 0 2 2 2 0 Cytochrome c Phage_int_SAM_1 PF02899.17 AID32082.1 - 0.057 13.7 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Cytochrome_B PF00033.19 AID32083.1 - 5.7e-71 238.2 16.9 5.7e-71 238.2 16.9 1.7 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 AID32083.1 - 3e-42 144.5 11.6 3e-42 144.5 11.6 2.7 3 0 0 3 3 3 2 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.17 AID32083.1 - 2.2e-41 140.3 5.5 2.2e-41 140.3 5.5 3.5 4 1 0 4 4 4 1 Cytochrome b(C-terminal)/b6/petD UCR_Fe-S_N PF10399.9 AID32084.1 - 4.8e-22 77.0 1.3 7.5e-22 76.4 1.3 1.3 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Rieske PF00355.26 AID32084.1 - 6.9e-13 48.4 0.0 1.1e-12 47.7 0.0 1.4 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain TAT_signal PF10518.9 AID32084.1 - 1.6 8.7 5.4 4.7 7.2 5.4 1.9 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Cupin_2 PF07883.11 AID32085.1 - 2.9e-17 62.1 0.2 3.7e-17 61.8 0.2 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID32085.1 - 9.7e-12 45.0 0.1 1.3e-11 44.5 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain ARD PF03079.14 AID32085.1 - 0.00072 19.8 0.1 0.0011 19.2 0.1 1.2 1 0 0 1 1 1 1 ARD/ARD' family MannoseP_isomer PF01050.18 AID32085.1 - 0.0034 17.3 0.0 0.0053 16.7 0.0 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 AID32085.1 - 0.0065 16.1 0.0 0.0091 15.6 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding_2 PF14525.6 AID32085.1 - 0.024 14.3 0.0 0.031 14.0 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain JmjC PF02373.22 AID32085.1 - 0.031 14.7 0.0 0.048 14.1 0.0 1.3 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 AID32085.1 - 0.072 12.8 0.0 0.086 12.6 0.0 1.2 1 0 0 1 1 1 0 Cupin GPI PF06560.11 AID32085.1 - 0.085 12.1 0.0 0.13 11.6 0.0 1.3 1 1 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Abhydrolase_6 PF12697.7 AID32086.1 - 5.1e-16 59.9 8.6 6.4e-16 59.6 8.6 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID32086.1 - 5.5e-15 55.7 0.2 1.1e-14 54.7 0.2 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID32086.1 - 2.4e-05 23.7 0.2 3.2e-05 23.3 0.2 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Chlorophyllase2 PF12740.7 AID32086.1 - 0.011 14.7 0.0 0.037 12.9 0.0 1.7 1 1 0 1 1 1 0 Chlorophyllase enzyme EHN PF06441.12 AID32086.1 - 0.052 13.9 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 Epoxide hydrolase N terminus Chlorophyllase PF07224.11 AID32086.1 - 0.14 11.2 0.0 0.7 8.9 0.0 1.9 1 1 0 1 1 1 0 Chlorophyllase Acetyltransf_10 PF13673.7 AID32088.1 - 1.7e-14 53.9 0.0 2.4e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID32088.1 - 2.2e-11 44.0 0.1 2.7e-11 43.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID32088.1 - 5.7e-09 36.3 0.1 8.2e-09 35.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID32088.1 - 3e-05 23.9 0.0 5.3e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID32088.1 - 0.0054 16.8 0.0 0.0083 16.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 AID32088.1 - 0.061 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase PanZ PF12568.8 AID32088.1 - 0.092 12.5 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ ABC_tran PF00005.27 AID32089.1 - 3.6e-34 118.2 0.0 5.7e-34 117.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID32089.1 - 4.2e-08 33.2 7.3 6e-08 32.7 7.3 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID32089.1 - 1.1e-06 28.3 0.1 4.8e-06 26.2 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID32089.1 - 0.00074 19.9 0.6 0.0023 18.3 0.6 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 AID32089.1 - 0.00091 19.0 0.0 0.0018 18.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID32089.1 - 0.0031 17.9 0.7 0.03 14.8 0.7 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID32089.1 - 0.0038 17.5 0.4 0.053 13.8 0.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID32089.1 - 0.0065 16.2 0.1 0.013 15.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 AID32089.1 - 0.009 15.9 0.2 0.16 11.9 0.0 2.2 2 0 0 2 2 2 1 NTPase AAA_5 PF07728.14 AID32089.1 - 0.0096 15.9 0.1 0.13 12.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 AID32089.1 - 0.02 14.2 0.1 0.39 10.0 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_18 PF13238.6 AID32089.1 - 0.021 15.4 0.0 0.039 14.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID32089.1 - 0.024 14.6 0.1 0.044 13.7 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 AID32089.1 - 0.04 14.0 0.2 0.082 13.0 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase APS_kinase PF01583.20 AID32089.1 - 0.071 13.0 0.4 0.16 11.9 0.1 1.7 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_7 PF12775.7 AID32089.1 - 0.075 12.5 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 AID32089.1 - 0.099 12.4 0.3 0.52 10.1 0.1 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 AID32089.1 - 0.15 12.2 0.2 0.36 11.0 0.2 1.6 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 AID32090.1 - 5.2e-36 124.2 0.0 8.5e-36 123.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID32090.1 - 1.1e-08 34.8 0.5 4.1e-07 29.7 0.0 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 AID32090.1 - 0.00019 21.5 0.2 0.00032 20.8 0.2 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID32090.1 - 0.00021 21.3 0.0 0.00035 20.5 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID32090.1 - 0.0022 18.3 0.2 0.03 14.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 AID32090.1 - 0.004 17.3 0.1 0.02 15.0 0.1 1.9 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_29 PF13555.6 AID32090.1 - 0.0061 16.3 0.2 0.014 15.2 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID32090.1 - 0.012 15.4 0.2 0.024 14.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID32090.1 - 0.012 16.0 0.4 0.2 12.1 0.4 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID32090.1 - 0.013 15.9 0.6 0.026 14.9 0.6 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 AID32090.1 - 0.022 14.5 0.0 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 AID32090.1 - 0.023 14.6 0.0 0.79 9.6 0.0 2.1 2 0 0 2 2 2 0 NTPase Zeta_toxin PF06414.12 AID32090.1 - 0.038 13.3 0.2 2.2 7.5 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 AID32090.1 - 0.11 12.7 0.0 0.21 11.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AID32090.1 - 0.13 11.9 0.1 2.4 7.8 0.0 2.7 4 0 0 4 4 4 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_21 PF13304.6 AID32090.1 - 0.18 11.6 0.2 1.7 8.3 0.1 2.1 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Septin PF00735.18 AID32090.1 - 0.18 11.0 0.0 0.25 10.6 0.0 1.1 1 0 0 1 1 1 0 Septin ABC_membrane PF00664.23 AID32091.1 - 5.7e-16 59.0 8.9 7.9e-16 58.5 8.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SpoU_methylase PF00588.19 AID32093.1 - 5.1e-30 104.5 0.0 5.7e-30 104.3 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family bPH_6 PF10756.9 AID32093.1 - 0.044 13.9 0.1 0.074 13.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial PH domain MerR-DNA-bind PF09278.11 AID32094.1 - 5.5e-17 62.1 0.1 7.9e-17 61.5 0.1 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 AID32094.1 - 8.4e-15 54.6 0.2 1.3e-14 54.0 0.0 1.4 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AID32094.1 - 1.5e-12 47.0 1.1 5.7e-12 45.2 0.2 2.3 2 0 0 2 2 2 1 MerR family regulatory protein Coprogen_oxidas PF01218.18 AID32098.1 - 3.3e-84 282.1 0.0 4e-84 281.8 0.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase DUF1059 PF06348.11 AID32099.1 - 5.2e-24 84.2 2.4 5.9e-24 84.1 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HEAT_2 PF13646.6 AID32099.1 - 0.082 13.3 0.2 0.094 13.1 0.2 1.0 1 0 0 1 1 1 0 HEAT repeats Peptidase_S8 PF00082.22 AID32101.1 - 3.5e-10 39.7 8.9 5.7e-10 38.9 7.6 1.9 1 1 0 1 1 1 1 Subtilase family Cerato-platanin PF07249.12 AID32101.1 - 0.006 16.7 0.2 0.027 14.6 0.1 2.2 2 0 0 2 2 2 1 Cerato-platanin PolyA_pol PF01743.20 AID32102.1 - 7e-27 94.4 0.1 1.1e-26 93.8 0.1 1.3 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 AID32102.1 - 5.2e-10 39.0 0.8 1.2e-09 37.8 0.0 2.0 2 0 0 2 2 2 1 Probable RNA and SrmB- binding site of polymerase A tRNA_NucTran2_2 PF13735.6 AID32102.1 - 0.00078 19.5 0.0 0.0016 18.5 0.0 1.5 1 0 0 1 1 1 1 tRNA nucleotidyltransferase domain 2 putative SPO11_like PF03533.14 AID32102.1 - 2.6 8.2 4.8 1 9.5 1.0 2.1 2 0 0 2 2 2 0 SPO11 homologue NUDIX PF00293.28 AID32103.1 - 2.8e-15 56.5 0.0 4.3e-15 55.9 0.0 1.3 1 1 0 1 1 1 1 NUDIX domain DUF1285 PF06938.11 AID32104.1 - 1.9e-56 190.2 0.0 4.5e-56 188.9 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1285) AAA_3 PF07726.11 AID32105.1 - 4e-59 198.2 0.0 5.8e-59 197.6 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID32105.1 - 7.8e-12 45.4 0.0 1.6e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_2 PF17863.1 AID32105.1 - 1.8e-11 43.7 1.9 4.7e-11 42.4 1.9 1.8 1 0 0 1 1 1 1 AAA lid domain MCM PF00493.23 AID32105.1 - 7.3e-06 25.2 0.0 2.4e-05 23.6 0.0 1.8 1 1 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 AID32105.1 - 0.0003 20.2 0.5 0.22 10.9 0.2 2.2 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 AID32105.1 - 0.002 17.9 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 AID32105.1 - 0.016 14.9 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain EutK_C PF16365.5 AID32105.1 - 0.066 13.2 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus DUF58 PF01882.18 AID32106.1 - 9.1e-16 57.9 1.0 2.1e-15 56.8 1.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF58 DUF4159 PF13709.6 AID32107.1 - 1e-56 191.6 0.0 1.1e-55 188.3 0.0 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4159) BatA PF07584.11 AID32107.1 - 1.9e-17 63.4 12.2 1.9e-17 63.4 12.2 2.5 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal Glyco_hydro_42M PF08532.10 AID32107.1 - 0.011 15.2 0.0 0.67 9.4 0.0 2.5 3 0 0 3 3 3 0 Beta-galactosidase trimerisation domain DUF4350 PF14258.6 AID32107.1 - 0.017 15.5 0.0 1.8 9.1 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4350) GATase1_like PF07090.11 AID32108.1 - 6e-05 22.6 0.0 8.9e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Putative glutamine amidotransferase Wzy_C PF04932.15 AID32108.1 - 0.074 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 O-Antigen ligase DUF4131 PF13567.6 AID32108.1 - 0.55 9.9 3.3 0.24 11.0 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) ClpS PF02617.17 AID32109.1 - 3.1e-26 90.9 0.0 3.7e-26 90.7 0.0 1.1 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS FixG_C PF11614.8 AID32109.1 - 0.1 12.9 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase OapA_N PF08525.11 AID32109.1 - 3.2 7.8 4.5 26 4.9 0.2 3.0 2 1 1 3 3 3 0 Opacity-associated protein A N-terminal motif PTS_EIIC_2 PF13303.6 AID32110.1 - 0.028 13.5 0.7 0.033 13.2 0.7 1.0 1 0 0 1 1 1 0 Phosphotransferase system, EIIC DUF2207 PF09972.9 AID32110.1 - 0.21 10.3 0.2 0.23 10.2 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4179 PF13786.6 AID32111.1 - 0.13 12.8 2.8 0.17 12.3 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) PepSY_TM PF03929.16 AID32111.1 - 0.14 11.8 1.6 0.15 11.7 1.6 1.0 1 0 0 1 1 1 0 PepSY-associated TM region FKBP_N PF01346.18 AID32112.1 - 0.093 13.7 0.1 0.11 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Response_reg PF00072.24 AID32113.1 - 7.3e-30 103.4 0.1 1.3e-29 102.6 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID32113.1 - 1.7e-21 76.1 0.3 4e-21 74.9 0.0 1.7 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal HATPase_c PF02518.26 AID32114.1 - 5.5e-20 72.0 0.0 8.8e-20 71.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 AID32114.1 - 5.6e-08 33.0 1.6 2.5e-07 30.9 0.3 2.7 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 AID32114.1 - 6.3e-06 26.1 3.0 9e-06 25.6 1.7 2.0 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain DUF4510 PF14971.6 AID32114.1 - 0.0022 18.4 0.6 0.0046 17.3 0.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4510) HATPase_c_2 PF13581.6 AID32114.1 - 0.003 17.5 0.3 0.0082 16.1 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID32114.1 - 0.0046 16.8 0.0 0.0086 15.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4381 PF14316.6 AID32114.1 - 0.11 12.8 1.3 8.1 6.7 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) ABC_tran PF00005.27 AID32115.1 - 3.3e-29 102.1 0.0 5.2e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32115.1 - 3.2e-09 37.0 0.9 5.4e-05 23.1 0.1 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32115.1 - 6.7e-05 22.4 0.4 0.00074 19.0 0.1 2.5 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 AID32115.1 - 0.00011 21.2 0.1 0.028 13.2 0.0 2.1 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 AID32115.1 - 0.0003 20.5 0.1 0.00071 19.3 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID32115.1 - 0.00049 20.0 0.3 0.0041 17.0 0.1 2.4 3 0 0 3 3 2 1 RsgA GTPase CBS PF00571.28 AID32115.1 - 0.0011 19.3 0.0 0.008 16.6 0.0 2.4 2 0 0 2 2 2 1 CBS domain AAA_16 PF13191.6 AID32115.1 - 0.0017 18.7 0.6 0.0089 16.4 0.6 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID32115.1 - 0.0047 17.2 0.0 0.0091 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID32115.1 - 0.005 17.4 0.0 0.017 15.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 AID32115.1 - 0.0065 16.4 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 AID32115.1 - 0.013 15.7 0.0 0.034 14.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID32115.1 - 0.014 15.1 0.0 0.04 13.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain PEPCK_ATP PF01293.20 AID32115.1 - 0.037 12.7 0.0 0.053 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase ATPase_2 PF01637.18 AID32115.1 - 0.037 13.9 0.0 1.7 8.5 0.1 3.2 3 1 0 3 3 3 0 ATPase domain predominantly from Archaea BPD_transp_1 PF00528.22 AID32116.1 - 2.3e-28 99.2 30.7 2.4e-28 99.1 13.2 2.1 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF2754 PF10953.8 AID32116.1 - 0.11 12.7 1.1 2.9 8.2 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2754) ETRAMP PF09716.10 AID32116.1 - 3 8.0 4.3 13 5.9 0.3 2.7 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) OpuAC PF04069.12 AID32117.1 - 2.6e-52 178.0 0.4 3e-52 177.7 0.4 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Asp_protease PF09668.10 AID32117.1 - 0.048 13.5 0.0 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Aspartyl protease TK PF00265.18 AID32118.1 - 1.6e-46 158.4 0.0 1.8e-46 158.3 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase AAA_22 PF13401.6 AID32118.1 - 0.00048 20.4 0.0 0.00074 19.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID32118.1 - 0.024 14.4 0.0 0.05 13.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF3331 PF11811.8 AID32118.1 - 0.053 13.4 0.3 0.8 9.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3331) EamA PF00892.20 AID32119.1 - 1.9e-34 118.8 37.6 1.7e-17 63.9 16.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 AID32119.1 - 0.0091 15.4 14.5 0.021 14.2 14.5 1.7 1 1 0 1 1 1 1 Triose-phosphate Transporter family DUF4516 PF14990.6 AID32119.1 - 0.13 12.0 1.0 1.5 8.6 0.0 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4516) LysR_substrate PF03466.20 AID32120.1 - 2.9e-31 108.5 5.2 3.8e-31 108.1 5.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32120.1 - 1.9e-18 66.1 0.1 3.8e-18 65.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Cytochrom_C PF00034.21 AID32121.1 - 1.6e-08 35.5 0.2 3.4e-08 34.5 0.2 1.5 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AID32121.1 - 1.7e-05 25.0 1.6 0.00098 19.4 1.6 2.1 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Glyco_hydro_20 PF00728.22 AID32121.1 - 0.11 11.8 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, catalytic domain CENP-F_leu_zip PF10473.9 AID32122.1 - 0.96 9.5 24.2 0.04 13.9 12.4 3.5 2 2 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA PF00004.29 AID32124.1 - 9.7e-11 42.2 0.0 3.2e-10 40.6 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID32124.1 - 0.036 14.3 0.0 0.16 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID32124.1 - 0.1 13.1 0.0 0.3 11.6 0.0 1.8 1 0 0 1 1 1 0 ABC transporter Viral_helicase1 PF01443.18 AID32124.1 - 0.2 11.4 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF2333 PF10095.9 AID32126.1 - 5.4e-24 84.8 1.6 2.8e-16 59.4 0.2 2.5 1 1 1 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2333) Arm-DNA-bind_4 PF14657.6 AID32127.1 - 0.078 12.8 0.8 0.11 12.3 0.8 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain FTHFS PF01268.19 AID32128.1 - 2.4e-174 580.6 1.2 2.7e-174 580.5 1.2 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase SRP54 PF00448.22 AID32128.1 - 0.48 10.0 2.1 25 4.4 0.0 2.9 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_31 PF13614.6 AID32128.1 - 2.7 7.9 4.5 0.83 9.5 0.6 2.1 2 1 1 3 3 3 0 AAA domain FTHFS PF01268.19 AID32129.1 - 3e-64 217.2 0.0 3.4e-64 217.0 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase Isochorismatase PF00857.20 AID32131.1 - 8.6e-33 114.0 0.1 1e-32 113.7 0.1 1.1 1 0 0 1 1 1 1 Isochorismatase family HTH_18 PF12833.7 AID32132.1 - 9.3e-19 67.5 2.8 1.7e-18 66.6 2.8 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 AID32132.1 - 7.8e-16 58.3 0.0 1.5e-15 57.4 0.0 1.5 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 AID32132.1 - 5e-11 42.4 1.0 4.7e-05 23.4 0.0 2.7 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 AID32132.1 - 0.051 13.4 0.8 0.32 10.8 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family Hexapep PF00132.24 AID32133.1 - 2.8e-11 42.7 13.8 5.1e-08 32.3 4.1 4.4 5 0 0 5 5 5 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID32133.1 - 3.7e-11 42.6 12.9 1.2e-08 34.5 3.8 3.6 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Mac PF12464.8 AID32133.1 - 9e-08 32.3 0.0 1.4e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Maltose acetyltransferase TraT PF05818.12 AID32134.1 - 0.51 10.0 5.1 0.12 12.1 1.1 1.8 2 0 0 2 2 2 0 Enterobacterial TraT complement resistance protein DUF3482 PF11981.8 AID32134.1 - 1.2 8.4 8.7 2 7.8 8.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Trep_Strep PF09605.10 AID32134.1 - 9.5 6.2 17.2 3.8 7.5 10.2 2.3 1 1 1 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) Pyr_redox_2 PF07992.14 AID32135.1 - 1.2e-53 182.2 0.5 1.7e-53 181.8 0.5 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID32135.1 - 1.1e-22 80.3 0.0 2.3e-22 79.3 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID32135.1 - 9.1e-20 71.0 1.0 1.2e-15 57.8 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID32135.1 - 1.8e-10 40.6 0.0 5.6e-07 29.1 0.0 2.5 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID32135.1 - 0.00048 20.3 6.0 0.42 10.9 0.0 3.3 2 1 0 3 3 3 2 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 AID32135.1 - 0.0016 18.7 0.4 1.6 9.0 0.0 2.6 2 0 0 2 2 2 2 TrkA-N domain Lycopene_cycl PF05834.12 AID32135.1 - 0.0017 17.5 0.2 0.026 13.6 0.8 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 AID32135.1 - 0.0021 17.5 0.1 0.9 8.9 0.2 2.4 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 AID32135.1 - 0.0023 17.2 0.8 0.014 14.6 0.2 2.1 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 AID32135.1 - 0.0029 16.9 0.1 0.0079 15.5 0.2 1.7 2 0 0 2 2 2 1 Thi4 family XdhC_C PF13478.6 AID32135.1 - 0.0033 17.9 0.1 0.81 10.2 0.0 2.7 2 2 0 2 2 2 1 XdhC Rossmann domain GIDA PF01134.22 AID32135.1 - 0.0034 16.5 2.5 0.0065 15.6 2.5 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_7 PF13241.6 AID32135.1 - 0.031 14.7 0.2 3 8.3 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding HI0933_like PF03486.14 AID32135.1 - 0.035 12.8 1.5 0.13 11.0 1.0 2.1 3 0 0 3 3 3 0 HI0933-like protein DAO PF01266.24 AID32135.1 - 0.039 13.5 2.0 0.32 10.5 1.6 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID32135.1 - 0.074 12.1 5.1 0.17 10.9 2.4 2.2 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 AID32135.1 - 0.21 11.4 1.4 16 5.3 0.5 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 AID32135.1 - 0.4 10.3 2.0 0.67 9.6 0.9 1.9 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA MFS_1 PF07690.16 AID32136.1 - 5.4e-39 134.1 58.6 5.4e-39 134.1 58.6 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID32136.1 - 2e-06 27.0 13.3 2e-06 27.0 13.3 2.5 2 0 0 2 2 2 1 Sugar (and other) transporter MFS_4 PF06779.14 AID32136.1 - 0.0032 16.8 46.1 0.004 16.5 46.1 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB AstE_AspA PF04952.14 AID32137.1 - 1.8e-38 132.3 0.0 3e-38 131.5 0.0 1.3 1 1 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family PEP_mutase PF13714.6 AID32138.1 - 1.1e-72 244.4 0.8 1.4e-72 244.1 0.8 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Pantoate_transf PF02548.15 AID32138.1 - 0.00032 20.2 0.1 0.00056 19.4 0.1 1.4 1 1 0 1 1 1 1 Ketopantoate hydroxymethyltransferase ThiG PF05690.14 AID32138.1 - 0.0097 15.2 0.8 0.02 14.2 0.7 1.7 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG Glyoxalase_4 PF13669.6 AID32138.1 - 0.076 13.3 0.0 0.16 12.3 0.0 1.6 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chorismate_bind PF00425.18 AID32140.1 - 7.1e-65 219.1 0.0 9.6e-65 218.7 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme GATase PF00117.28 AID32140.1 - 2.1e-42 145.0 0.0 3.5e-42 144.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AID32140.1 - 7.4e-15 55.3 0.0 1.4e-14 54.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase C26 Anth_synt_I_N PF04715.13 AID32140.1 - 1.1e-09 38.6 0.0 8.4e-09 35.8 0.0 2.5 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region Cation_efflux PF01545.21 AID32141.1 - 2.1e-38 132.1 9.7 2.6e-38 131.8 9.7 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 AID32141.1 - 2.4e-23 82.0 2.0 4e-23 81.3 2.0 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Phage_holin_1 PF04531.13 AID32141.1 - 5.7 7.5 7.8 0.61 10.6 1.2 2.5 3 0 0 3 3 3 0 Bacteriophage holin adh_short_C2 PF13561.6 AID32144.1 - 2.1e-56 191.1 2.0 2.5e-56 190.8 2.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32144.1 - 1.1e-46 158.8 0.6 1.2e-46 158.6 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32144.1 - 4.7e-10 39.7 1.3 6.5e-10 39.2 1.3 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID32144.1 - 0.0095 15.4 0.1 0.023 14.2 0.0 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.8 AID32144.1 - 0.03 14.1 0.2 0.058 13.2 0.2 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ABM PF03992.16 AID32145.1 - 1.1e-12 47.9 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase AbrB PF05145.12 AID32146.1 - 5.1e-91 304.9 50.7 1e-90 303.9 41.1 1.8 1 1 1 2 2 2 2 Transition state regulatory protein AbrB LysR_substrate PF03466.20 AID32147.1 - 5.4e-49 166.4 0.4 7.5e-49 165.9 0.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32147.1 - 5.4e-16 58.3 3.1 1e-15 57.4 3.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MFS_1 PF07690.16 AID32148.1 - 7e-44 150.2 55.5 7e-44 150.2 55.5 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 AID32148.1 - 0.0018 16.8 10.5 0.0018 16.8 10.5 2.4 2 0 0 2 2 2 1 Transmembrane secretion effector SnoaL_2 PF12680.7 AID32149.1 - 2.7e-08 34.4 1.2 4.2e-08 33.8 1.2 1.3 1 1 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 AID32149.1 - 0.0056 16.9 0.0 0.0064 16.8 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 AID32149.1 - 0.0069 16.8 0.2 0.013 15.9 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) Esterase PF00756.20 AID32150.1 - 0.0001 22.0 0.0 0.0002 21.1 0.0 1.5 1 1 0 1 1 1 1 Putative esterase ATP-grasp_4 PF13535.6 AID32151.1 - 8.9e-12 44.9 0.1 1.6e-10 40.8 0.1 2.3 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 AID32151.1 - 8.1e-06 25.5 0.0 1.9e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 AID32151.1 - 1.4e-05 25.2 0.0 2.9e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 AID32151.1 - 0.00011 21.9 0.0 0.00019 21.0 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 AID32151.1 - 0.0056 16.5 0.0 0.042 13.6 0.0 2.0 1 1 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPSase_L_D2 PF02786.17 AID32151.1 - 0.0065 16.0 0.0 0.014 14.9 0.0 1.7 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_5 PF13549.6 AID32151.1 - 0.052 13.0 0.0 0.098 12.1 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain HMGL-like PF00682.19 AID32154.1 - 4.9e-73 245.9 0.0 7.3e-73 245.4 0.0 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 AID32154.1 - 8.8e-29 100.1 0.0 1.5e-28 99.3 0.0 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TPR_14 PF13428.6 AID32155.1 - 2.1e-05 24.9 7.0 0.12 13.2 0.0 6.1 4 1 2 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID32155.1 - 0.0002 21.2 0.0 0.0016 18.4 0.1 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 AID32155.1 - 0.0047 17.0 2.6 0.02 15.0 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 AID32155.1 - 0.0053 16.0 0.4 0.022 14.0 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat NARP1 PF12569.8 AID32155.1 - 0.021 13.7 0.1 0.032 13.1 0.1 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_17 PF13431.6 AID32155.1 - 0.17 12.4 0.3 5.6 7.6 0.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 AID32155.1 - 0.34 11.2 3.9 0.86 9.9 0.0 2.8 3 1 1 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 Abhydrolase_6 PF12697.7 AID32157.1 - 4.5e-25 89.6 9.4 5.4e-25 89.3 9.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 AID32157.1 - 1.2e-20 74.3 0.7 2.6e-18 66.6 0.3 2.3 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID32157.1 - 1.4e-12 47.4 1.6 1.3e-11 44.2 1.6 2.2 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 AID32157.1 - 1.6e-05 24.8 0.2 0.3 10.8 0.0 2.9 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase PGAP1 PF07819.13 AID32157.1 - 2.3e-05 24.2 0.1 0.00046 20.0 0.0 2.1 2 0 0 2 2 2 1 PGAP1-like protein Ser_hydrolase PF06821.13 AID32157.1 - 6.1e-05 23.0 1.4 0.075 12.9 0.2 2.5 3 0 0 3 3 3 2 Serine hydrolase Thioesterase PF00975.20 AID32157.1 - 8.6e-05 22.8 0.2 0.0011 19.2 0.1 2.1 2 0 0 2 2 2 1 Thioesterase domain Lipase_3 PF01764.25 AID32157.1 - 0.0005 19.9 0.3 0.00091 19.1 0.3 1.4 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_5 PF12695.7 AID32157.1 - 0.00083 19.2 0.0 0.083 12.6 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Esterase PF00756.20 AID32157.1 - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.6 2 0 0 2 2 2 1 Putative esterase DUF676 PF05057.14 AID32157.1 - 0.0032 17.0 0.0 0.13 11.8 0.0 2.1 2 0 0 2 2 2 1 Putative serine esterase (DUF676) DUF915 PF06028.11 AID32157.1 - 0.006 15.9 0.0 0.16 11.3 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) DLH PF01738.18 AID32157.1 - 0.0064 16.1 0.0 0.53 9.8 0.0 2.8 3 0 0 3 3 3 1 Dienelactone hydrolase family Esterase_phd PF10503.9 AID32157.1 - 0.0065 16.0 1.1 0.16 11.4 0.4 2.3 2 0 0 2 2 2 1 Esterase PHB depolymerase DUF2974 PF11187.8 AID32157.1 - 0.0079 15.8 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) BAAT_C PF08840.11 AID32157.1 - 0.014 15.3 0.0 0.031 14.2 0.0 1.5 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal FSH1 PF03959.13 AID32157.1 - 0.017 14.8 0.0 1.3 8.7 0.0 2.8 1 1 1 2 2 2 0 Serine hydrolase (FSH1) DUF900 PF05990.12 AID32157.1 - 0.025 14.1 0.0 0.053 13.0 0.0 1.5 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_8 PF06259.12 AID32157.1 - 0.06 13.0 0.2 0.098 12.3 0.2 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase Chlorophyllase2 PF12740.7 AID32157.1 - 0.076 11.9 0.2 0.17 10.8 0.1 1.5 2 0 0 2 2 2 0 Chlorophyllase enzyme DUF1057 PF06342.12 AID32157.1 - 0.16 11.0 0.3 0.93 8.5 0.3 2.0 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Metallophos PF00149.28 AID32159.1 - 2.8e-13 50.8 0.5 3.9e-13 50.4 0.5 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID32159.1 - 2.8e-11 43.9 0.0 7.7e-10 39.2 0.0 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain NUDIX PF00293.28 AID32160.1 - 7.9e-16 58.3 0.0 1.1e-15 57.9 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain GST_N_2 PF13409.6 AID32161.1 - 1e-23 83.4 0.0 2.3e-23 82.2 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID32161.1 - 1.4e-14 53.9 0.1 4.5e-14 52.2 0.1 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 AID32161.1 - 2.2e-10 40.6 0.0 4.9e-10 39.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID32161.1 - 2.8e-05 24.2 0.0 5.3e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 AID32161.1 - 0.00017 21.9 0.0 0.0021 18.4 0.0 2.2 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 AID32161.1 - 0.00051 19.8 0.0 0.001 18.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Acetyltransf_1 PF00583.25 AID32162.1 - 5.5e-06 26.6 0.0 6.7e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID32162.1 - 1.6e-05 25.3 0.0 2.4e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID32162.1 - 0.00051 20.1 0.0 0.00095 19.2 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID32162.1 - 0.0006 19.7 0.0 0.0009 19.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID32162.1 - 0.048 13.6 0.0 0.082 12.9 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein adh_short PF00106.25 AID32163.1 - 3.7e-45 153.8 2.4 4.3e-45 153.6 2.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32163.1 - 2.8e-42 144.9 1.6 3.5e-42 144.5 1.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32163.1 - 8.1e-06 25.9 4.7 4.6e-05 23.4 3.9 2.4 1 1 1 2 2 2 1 KR domain Epimerase PF01370.21 AID32163.1 - 0.0032 17.0 0.2 0.0053 16.3 0.2 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family CbiA PF01656.23 AID32163.1 - 0.019 15.1 0.0 0.05 13.7 0.0 1.7 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Sacchrp_dh_NADP PF03435.18 AID32163.1 - 0.042 14.1 0.6 0.23 11.7 0.6 1.9 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain ZNRF_3_ecto PF18212.1 AID32163.1 - 0.44 10.5 2.4 3.1 7.9 0.1 2.2 1 1 1 2 2 2 0 ZNRF-3 Ectodomain DUF2470 PF10615.9 AID32165.1 - 1.3e-13 51.4 0.0 2.3e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) Pyrid_oxidase_2 PF13883.6 AID32165.1 - 1.1e-06 28.8 0.0 1.7e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 AID32165.1 - 0.00012 22.2 0.0 0.0015 18.7 0.0 2.1 1 1 1 2 2 2 1 Pyridoxamine 5'-phosphate oxidase HTH_5 PF01022.20 AID32166.1 - 8e-16 57.6 0.4 1.2e-15 57.1 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID32166.1 - 2.6e-10 40.2 0.7 4.2e-10 39.5 0.3 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 AID32166.1 - 1.1e-07 31.6 0.4 3.8e-07 29.9 0.1 1.8 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 AID32166.1 - 0.00017 21.9 0.1 0.0009 19.5 0.1 1.9 2 0 0 2 2 2 1 Transcriptional regulator HTH_24 PF13412.6 AID32166.1 - 0.00024 20.6 0.1 0.00041 19.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 AID32166.1 - 0.00078 19.5 0.0 0.0014 18.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID32166.1 - 0.0014 18.6 0.5 0.074 13.0 0.1 2.1 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 AID32166.1 - 0.0015 18.6 0.3 0.0024 18.0 0.3 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID32166.1 - 0.0038 17.0 0.2 0.012 15.4 0.1 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 AID32166.1 - 0.0043 17.0 0.0 0.0073 16.2 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID32166.1 - 0.0045 16.8 0.0 0.007 16.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 AID32166.1 - 0.0077 16.7 0.1 0.016 15.6 0.1 1.5 2 0 0 2 2 1 1 Winged helix DNA-binding domain HTH_1 PF00126.27 AID32166.1 - 0.0093 15.9 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HxlR PF01638.17 AID32166.1 - 0.012 15.4 0.1 0.014 15.2 0.1 1.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HNF-1_N PF04814.13 AID32166.1 - 0.024 15.3 0.0 0.032 14.8 0.0 1.2 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus HTH_11 PF08279.12 AID32166.1 - 0.037 14.0 0.1 0.064 13.2 0.1 1.4 1 0 0 1 1 1 0 HTH domain TFIIE_alpha PF02002.17 AID32166.1 - 0.04 13.8 0.5 0.064 13.1 0.5 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_40 PF14493.6 AID32166.1 - 0.043 14.3 0.0 0.05 14.1 0.0 1.3 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_47 PF16221.5 AID32166.1 - 0.064 12.8 0.8 0.94 9.1 0.3 2.0 2 0 0 2 2 2 0 winged helix-turn-helix Dimerisation2 PF16864.5 AID32166.1 - 0.066 13.2 0.1 0.099 12.6 0.1 1.3 1 1 0 1 1 1 0 Dimerisation domain Mga PF05043.13 AID32166.1 - 0.082 13.5 0.0 0.33 11.6 0.0 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain SpoU_methylase PF00588.19 AID32167.1 - 3e-07 30.7 0.0 5.5e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 AID32167.1 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Seryl_tRNA_N PF02403.22 AID32168.1 - 0.00097 19.3 1.8 0.00097 19.3 1.8 3.8 2 1 2 4 4 4 1 Seryl-tRNA synthetase N-terminal domain UPF0242 PF06785.11 AID32168.1 - 0.02 15.0 29.1 2 8.5 12.2 3.2 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus SlyX PF04102.12 AID32168.1 - 0.051 14.2 0.1 0.051 14.2 0.1 6.0 3 2 3 6 6 6 0 SlyX DUF713 PF05218.14 AID32168.1 - 0.091 12.5 4.7 0.13 12.0 1.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF713) CALCOCO1 PF07888.11 AID32168.1 - 0.098 11.5 45.4 0.16 10.8 30.5 2.2 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like Fez1 PF06818.15 AID32168.1 - 0.24 11.8 36.5 0.12 12.8 19.3 3.1 1 1 2 3 3 3 0 Fez1 NPV_P10 PF05531.12 AID32168.1 - 0.92 10.0 9.0 0.6 10.6 1.1 3.7 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF4407 PF14362.6 AID32168.1 - 1.1 8.6 40.0 0.79 9.0 21.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4250 PF14056.6 AID32168.1 - 1.3 9.0 4.0 22 5.1 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) TMF_DNA_bd PF12329.8 AID32168.1 - 4.6 7.3 44.5 2.1 8.4 0.8 5.8 4 2 2 6 6 6 0 TATA element modulatory factor 1 DNA binding TMF_TATA_bd PF12325.8 AID32168.1 - 6.7 7.0 41.7 27 5.0 12.7 5.0 3 3 0 3 3 3 0 TATA element modulatory factor 1 TATA binding ADIP PF11559.8 AID32168.1 - 7.7 6.6 45.0 0.056 13.5 2.6 4.0 3 1 1 4 4 4 0 Afadin- and alpha -actinin-Binding Baculo_PEP_C PF04513.12 AID32168.1 - 8.4 6.4 10.8 2.6 8.1 0.3 3.6 2 1 1 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1134 PF06577.12 AID32169.1 - 4e-74 247.7 4.9 4.5e-74 247.5 4.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1134) DUF992 PF06186.11 AID32169.1 - 0.0021 17.9 0.7 0.0031 17.3 0.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF992) HPTransfase PF10090.9 AID32170.1 - 2.7e-42 143.5 0.0 4.1e-42 142.9 0.0 1.3 1 0 0 1 1 1 1 Histidine phosphotransferase C-terminal domain Response_reg PF00072.24 AID32171.1 - 1.6e-18 66.9 0.1 1.7e-18 66.8 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain UvrC_HhH_N PF08459.11 AID32171.1 - 0.021 14.7 0.1 0.024 14.5 0.1 1.2 1 0 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal Response_reg PF00072.24 AID32172.1 - 1.6e-25 89.5 0.0 2.5e-25 88.8 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID32172.1 - 1.2e-20 73.3 0.0 2.4e-20 72.4 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal FliJ PF02050.16 AID32173.1 - 0.0091 16.2 6.1 0.012 15.8 6.1 1.1 1 0 0 1 1 1 1 Flagellar FliJ protein HxlR PF01638.17 AID32174.1 - 7.8e-27 93.0 0.1 8.9e-27 92.8 0.1 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 AID32174.1 - 0.0011 18.8 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 AID32174.1 - 0.0025 17.7 0.0 0.0038 17.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID32174.1 - 0.0029 17.6 0.1 0.0052 16.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain PadR PF03551.14 AID32174.1 - 0.0098 15.8 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR_2 PF12802.7 AID32174.1 - 0.017 15.0 0.3 0.037 13.9 0.1 1.6 2 0 0 2 2 2 0 MarR family HTH_24 PF13412.6 AID32174.1 - 0.023 14.3 0.2 0.045 13.3 0.2 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding MerR PF00376.23 AID32174.1 - 0.039 13.7 0.1 9.2 6.1 0.0 2.3 2 0 0 2 2 2 0 MerR family regulatory protein Rrf2 PF02082.20 AID32174.1 - 0.082 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator ADH_zinc_N_2 PF13602.6 AID32175.1 - 1.4e-23 84.4 0.1 2.6e-23 83.5 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 AID32175.1 - 6.1e-17 61.8 0.1 1.1e-16 61.0 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID32175.1 - 3.2e-08 33.4 0.0 1.2e-07 31.6 0.0 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 AID32175.1 - 0.13 11.5 3.2 0.68 9.2 0.1 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain DUF1153 PF06627.11 AID32176.1 - 6.1e-42 141.7 0.1 7e-42 141.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1153) HTH_28 PF13518.6 AID32176.1 - 0.0037 17.3 0.5 0.0061 16.7 0.5 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain tRNA_Me_trans PF03054.16 AID32178.1 - 1.9e-113 378.9 0.0 2.2e-113 378.7 0.0 1.0 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 AID32178.1 - 7.9e-06 25.8 0.0 1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 AID32178.1 - 0.00039 20.0 0.1 0.0021 17.6 0.1 2.0 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 AID32178.1 - 0.0036 16.9 0.1 0.092 12.3 0.1 2.4 2 1 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) NAD_synthase PF02540.17 AID32178.1 - 0.0049 16.0 0.1 0.018 14.1 0.1 1.9 2 1 0 2 2 2 1 NAD synthase Arginosuc_synth PF00764.19 AID32178.1 - 0.009 15.3 0.1 0.023 14.0 0.1 1.7 1 1 0 2 2 2 1 Arginosuccinate synthase ATP_bind_3 PF01171.20 AID32178.1 - 0.058 13.1 0.0 0.15 11.8 0.0 1.6 2 0 0 2 2 2 0 PP-loop family GFO_IDH_MocA PF01408.22 AID32179.1 - 7e-21 75.3 0.0 1.3e-20 74.4 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID32179.1 - 0.00012 22.0 0.0 0.00094 19.2 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.24 AID32179.1 - 0.02 15.3 0.0 0.043 14.3 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 AID32179.1 - 0.047 13.0 0.0 0.17 11.2 0.0 1.8 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 AID32179.1 - 0.082 13.5 0.0 0.15 12.7 0.0 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_3 PF03447.16 AID32179.1 - 0.12 13.1 0.0 0.21 12.3 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain YadA_anchor PF03895.15 AID32181.1 - 5.1e-11 42.5 3.8 5.1e-11 42.5 3.8 2.4 1 1 1 2 2 2 1 YadA-like membrane anchor domain YadA_head PF05658.14 AID32183.1 - 3.9e-87 285.3 416.9 2.2e-07 31.1 2.1 33.6 20 6 6 33 33 33 32 Head domain of trimeric autotransporter adhesin YadA_stalk PF05662.14 AID32183.1 - 4.6e-36 122.9 55.4 1.1e-11 44.9 12.7 9.7 9 1 1 10 10 10 4 Coiled stalk of trimeric autotransporter adhesin HTH_AraC PF00165.23 AID32184.1 - 1.5e-07 31.3 0.0 2.3e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 AID32184.1 - 2.5e-05 24.5 0.0 4.6e-05 23.6 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_18 PF12833.7 AID32186.1 - 4.3e-17 62.2 0.1 8.9e-17 61.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32186.1 - 4.8e-11 42.5 0.0 0.00012 22.1 0.0 2.7 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family PLDc_2 PF13091.6 AID32188.1 - 5.2e-39 133.2 0.0 7e-24 84.2 0.0 2.2 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 AID32188.1 - 2e-10 40.4 1.5 5.5e-05 23.2 0.1 2.6 2 0 0 2 2 2 2 Phospholipase D Active site motif PLDc_N PF13396.6 AID32188.1 - 0.0014 18.5 0.8 0.0032 17.4 0.8 1.7 1 0 0 1 1 1 1 Phospholipase_D-nuclease N-terminal PP_kinase_C PF13090.6 AID32188.1 - 0.0054 16.2 0.1 0.048 13.1 0.1 2.2 1 1 0 1 1 1 1 Polyphosphate kinase C-terminal domain 2 Exo_endo_phos PF03372.23 AID32189.1 - 1.3e-08 34.7 0.1 2e-08 34.1 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family ANTAR PF03861.14 AID32191.1 - 9.6e-22 76.6 1.1 1.9e-21 75.6 1.1 1.5 1 0 0 1 1 1 1 ANTAR domain Response_reg PF00072.24 AID32191.1 - 2.7e-07 30.7 0.6 4e-07 30.2 0.6 1.3 1 0 0 1 1 1 1 Response regulator receiver domain NMT1_2 PF13379.6 AID32192.1 - 5.2e-73 245.8 0.7 6.5e-73 245.5 0.1 1.3 2 0 0 2 2 2 1 NMT1-like family NMT1 PF09084.11 AID32192.1 - 2.2e-06 27.8 0.0 6.6e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 NMT1/THI5 like UCR_Fe-S_N PF10399.9 AID32194.1 - 0.0018 17.6 0.5 0.0018 17.6 0.5 1.6 2 0 0 2 2 2 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 AID32194.1 - 0.018 14.9 4.8 0.018 14.9 4.8 2.6 2 1 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence MFS_1 PF07690.16 AID32195.1 - 3e-44 151.4 80.1 3.8e-35 121.5 45.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 AID32195.1 - 2.6e-07 29.8 25.2 0.00017 20.5 3.8 2.4 2 1 0 2 2 2 2 LacY proton/sugar symporter 2-Hacid_dh_C PF02826.19 AID32195.1 - 0.061 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF4381 PF14316.6 AID32195.1 - 0.46 10.7 5.6 12 6.1 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Sugar_tr PF00083.24 AID32195.1 - 8.3 5.1 38.4 20 3.9 15.0 3.2 1 1 2 3 3 3 0 Sugar (and other) transporter Pyr_redox_2 PF07992.14 AID32196.1 - 1.8e-56 191.5 2.0 2.9e-56 190.9 2.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 AID32196.1 - 2.2e-25 89.0 0.2 3.6e-25 88.3 0.2 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 AID32196.1 - 2.8e-25 88.4 10.4 1.3e-12 47.9 0.4 2.8 2 0 0 2 2 2 2 BFD-like [2Fe-2S] binding domain Pyr_redox PF00070.27 AID32196.1 - 8.7e-21 74.3 1.4 4.8e-19 68.7 0.4 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Rubredoxin_C PF18267.1 AID32196.1 - 6.9e-18 64.3 0.2 3e-17 62.3 0.0 2.3 2 0 0 2 2 1 1 Rubredoxin NAD+ reductase C-terminal domain NIR_SIR_ferr PF03460.17 AID32196.1 - 3e-13 49.4 0.0 7.5e-13 48.1 0.0 1.7 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Pyr_redox_3 PF13738.6 AID32196.1 - 2.5e-12 46.7 0.0 3.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 AID32196.1 - 0.00032 20.1 2.0 0.00089 18.6 1.9 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 AID32196.1 - 0.00035 20.3 9.7 0.72 9.4 0.6 3.5 2 1 1 3 3 3 3 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 AID32196.1 - 0.0021 18.0 5.0 2.7 8.0 0.1 4.2 3 1 1 4 4 4 2 FAD-NAD(P)-binding Trp_halogenase PF04820.14 AID32196.1 - 0.014 14.3 1.4 0.25 10.1 0.0 2.3 2 0 0 2 2 2 0 Tryptophan halogenase NAD_binding_8 PF13450.6 AID32196.1 - 0.015 15.5 0.5 0.24 11.6 1.2 2.5 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 AID32196.1 - 0.021 14.7 0.7 0.052 13.4 0.7 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID32196.1 - 0.027 13.5 1.4 4.4 6.2 0.1 2.7 3 0 0 3 3 3 0 Lycopene cyclase protein HI0933_like PF03486.14 AID32196.1 - 0.081 11.6 3.4 1.8 7.2 0.6 3.1 3 0 0 3 3 3 0 HI0933-like protein FAD_binding_3 PF01494.19 AID32196.1 - 0.085 12.1 1.6 0.15 11.3 1.0 1.7 2 0 0 2 2 2 0 FAD binding domain Shikimate_DH PF01488.20 AID32196.1 - 0.11 12.6 0.9 5.3 7.1 0.0 2.5 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 AID32196.1 - 0.12 12.8 0.1 0.87 10.1 0.3 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding GIDA PF01134.22 AID32196.1 - 0.2 10.7 10.7 0.1 11.6 1.1 2.8 2 1 1 3 3 3 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 AID32196.1 - 0.26 10.3 6.9 0.33 10.0 2.7 2.3 1 1 1 2 2 2 0 FAD binding domain Rieske_2 PF13806.6 AID32197.1 - 1.3e-18 66.8 0.0 1.5e-18 66.7 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Rieske PF00355.26 AID32197.1 - 2.3e-15 56.3 0.0 2.8e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Molybdopterin PF00384.22 AID32198.1 - 1.6e-79 267.9 0.0 2.3e-79 267.4 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 AID32198.1 - 2.6e-33 114.4 0.0 8.4e-33 112.7 0.0 1.9 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 AID32198.1 - 7e-20 70.8 0.6 1.6e-19 69.6 0.6 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_BFD PF04324.15 AID32198.1 - 8.8e-13 48.4 5.3 2.8e-12 46.8 5.3 1.9 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain TPP_enzyme_M PF00205.22 AID32198.1 - 0.075 12.8 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Biotin_lipoyl_2 PF13533.6 AID32199.1 - 2.1e-16 59.4 4.2 6.8e-16 57.8 0.8 3.0 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_D23 PF16576.5 AID32199.1 - 1.3e-14 54.0 0.9 2.3e-14 53.1 0.9 1.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID32199.1 - 1e-07 32.6 10.2 1.5e-06 28.8 0.1 3.5 3 1 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 AID32199.1 - 0.048 13.5 0.0 0.2 11.5 0.0 2.2 1 0 0 1 1 1 0 Biotin-requiring enzyme PTS_EIIA_1 PF00358.20 AID32199.1 - 0.058 13.1 0.1 0.26 11.0 0.0 2.0 1 1 0 1 1 1 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ACR_tran PF00873.19 AID32200.1 - 0 1081.0 26.1 0 1080.8 26.1 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 AID32200.1 - 3.1e-07 29.7 9.4 3.1e-07 29.7 9.4 2.7 3 0 0 3 3 3 2 MMPL family SecD_SecF PF02355.16 AID32200.1 - 4.3e-05 23.0 30.0 0.0003 20.2 14.3 2.7 3 0 0 3 3 3 2 Protein export membrane protein Patched PF02460.18 AID32200.1 - 0.0013 16.9 13.1 0.0013 16.9 13.1 2.1 2 0 0 2 2 2 1 Patched family ACR_tran PF00873.19 AID32201.1 - 0 1041.2 22.4 0 1033.5 22.4 2.0 1 1 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID32201.1 - 4.7e-06 26.1 30.6 0.00021 20.7 16.3 2.4 2 0 0 2 2 2 2 Protein export membrane protein Aldedh PF00171.22 AID32202.1 - 7.7e-17 60.9 0.0 8e-17 60.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aldedh PF00171.22 AID32208.1 - 4e-125 417.9 0.0 5e-125 417.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF3253 PF11625.8 AID32208.1 - 0.17 12.1 0.1 0.57 10.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3253) Sigma70_r2 PF04542.14 AID32209.1 - 4.5e-12 45.6 0.4 1.5e-11 43.9 0.1 2.0 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID32209.1 - 1.4e-08 34.3 0.1 4.8e-08 32.5 0.1 2.1 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID32209.1 - 0.0061 16.5 0.9 0.032 14.1 0.2 2.5 3 1 0 3 3 3 1 ECF sigma factor Sigma70_r4 PF04545.16 AID32209.1 - 0.011 15.3 0.1 0.028 13.9 0.1 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 HlyD_D4 PF16572.5 AID32209.1 - 0.076 12.9 0.0 0.35 10.8 0.0 2.2 1 0 0 1 1 1 0 Long alpha hairpin domain of cation efflux system protein, CusB TPR_2 PF07719.17 AID32209.1 - 0.084 13.0 4.6 0.57 10.4 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 AID32209.1 - 0.093 12.6 0.4 4.5 7.2 0.0 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_21 PF09976.9 AID32209.1 - 0.12 12.0 2.0 0.2 11.3 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain TPR_14 PF13428.6 AID32209.1 - 1.8 9.6 18.0 4.1 8.5 0.5 5.1 4 1 1 5 5 5 0 Tetratricopeptide repeat YCII PF03795.14 AID32210.1 - 2.3e-27 95.2 0.0 2.6e-27 95.1 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain Topoisom_I PF01028.20 AID32211.1 - 4.9e-29 101.2 0.0 6.7e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Acyl-CoA_dh_C PF12806.7 AID32211.1 - 0.13 12.4 0.1 0.37 11.0 0.0 1.8 2 0 0 2 2 2 0 Acetyl-CoA dehydrogenase C-terminal like Glycos_transf_2 PF00535.26 AID32212.1 - 6.9e-22 78.1 0.0 1e-21 77.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID32212.1 - 1.1e-10 41.8 0.2 1.8e-10 41.1 0.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID32212.1 - 9.6e-05 22.8 0.0 0.00021 21.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 AID32212.1 - 0.015 14.7 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 UreD PF01774.17 AID32212.1 - 0.81 9.6 3.3 1.1 9.1 1.6 2.1 2 1 0 2 2 2 0 UreD urease accessory protein Transglut_core PF01841.19 AID32213.1 - 1e-18 67.8 0.1 1.8e-18 67.0 0.1 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bact_transglu_N PF08379.10 AID32213.1 - 8.7e-15 55.4 0.1 5.1e-14 52.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial transglutaminase-like N-terminal region CP_ATPgrasp_2 PF14403.6 AID32214.1 - 9.4e-141 469.1 0.0 1.2e-140 468.7 0.0 1.2 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 CP_ATPgrasp_1 PF04174.13 AID32214.1 - 6.2e-95 318.0 0.0 8e-95 317.7 0.0 1.1 1 0 0 1 1 1 1 A circularly permuted ATPgrasp Alpha-E PF04168.12 AID32214.1 - 4.1e-54 184.4 0.0 1.7e-53 182.3 0.0 2.1 1 1 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. DUF3717 PF12512.8 AID32214.1 - 0.16 11.9 0.0 0.38 10.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3717) DUF2126 PF09899.9 AID32215.1 - 0 1337.5 0.0 0 1337.3 0.0 1.0 1 0 0 1 1 1 1 Putative amidoligase enzyme (DUF2126) Bact_transglu_N PF08379.10 AID32215.1 - 2.5e-27 95.6 0.5 6.4e-27 94.3 0.5 1.8 1 0 0 1 1 1 1 Bacterial transglutaminase-like N-terminal region Transglut_core PF01841.19 AID32215.1 - 1.3e-18 67.4 0.0 4.2e-18 65.8 0.0 1.9 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 AID32215.1 - 0.1 12.1 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase-like domain Acyl-CoA_dh_N PF02771.16 AID32216.1 - 1.2e-36 125.7 0.1 2.5e-36 124.8 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_1 PF00441.24 AID32216.1 - 4.2e-26 92.0 0.7 6e-26 91.5 0.7 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID32216.1 - 2e-21 76.0 0.0 3.4e-21 75.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 AID32216.1 - 0.001 19.4 0.4 0.0046 17.2 0.4 2.0 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain HTH_1 PF00126.27 AID32217.1 - 8.4e-22 76.9 2.3 1.7e-21 75.9 2.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID32217.1 - 4.8e-20 71.8 1.1 1.1e-19 70.7 1.1 1.6 1 0 0 1 1 1 1 LysR substrate binding domain P22_Cro PF14549.6 AID32217.1 - 0.083 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Tex_N PF09371.10 AID32218.1 - 5e-68 228.3 3.3 8.6e-68 227.6 3.3 1.4 1 0 0 1 1 1 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 AID32218.1 - 1.1e-47 161.7 0.0 2e-47 160.8 0.0 1.5 1 0 0 1 1 1 1 Tex protein YqgF-like domain HHH_3 PF12836.7 AID32218.1 - 2.7e-27 94.8 0.0 1.5e-26 92.4 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_9 PF17674.1 AID32218.1 - 3.4e-24 85.5 0.0 1.5e-23 83.4 0.0 2.2 2 0 0 2 2 2 1 HHH domain S1 PF00575.23 AID32218.1 - 4.5e-19 68.6 1.8 8.6e-19 67.7 1.8 1.5 1 0 0 1 1 1 1 S1 RNA binding domain HHH_7 PF14635.6 AID32218.1 - 1.3e-07 31.9 0.0 2.7e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif YqgF PF14639.6 AID32218.1 - 1e-06 28.6 0.0 2.6e-06 27.3 0.0 1.7 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 T2SSK PF03934.13 AID32218.1 - 9.5e-05 21.9 0.3 0.00036 20.0 0.0 1.9 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein K HHH_6 PF14579.6 AID32218.1 - 0.00028 21.1 0.0 0.0045 17.2 0.0 2.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 AID32218.1 - 0.018 14.9 0.1 0.69 9.9 0.0 3.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif Beta-lactamase PF00144.24 AID32219.1 - 5e-42 144.3 0.2 7.4e-42 143.8 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase Beta-lactamase PF00144.24 AID32220.1 - 1e-30 107.2 0.3 2.2e-30 106.0 0.3 1.5 1 1 0 1 1 1 1 Beta-lactamase SBP_bac_8 PF13416.6 AID32221.1 - 7.7e-23 81.7 10.6 1e-22 81.3 10.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID32221.1 - 3e-17 62.8 3.6 3e-17 62.8 3.6 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32221.1 - 0.00082 19.2 0.1 0.0026 17.5 0.0 1.8 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein Egh16-like PF11327.8 AID32221.1 - 0.046 14.1 0.0 0.11 13.0 0.0 1.4 1 1 0 1 1 1 0 Egh16-like virulence factor BPD_transp_1 PF00528.22 AID32222.1 - 7.6e-16 58.4 8.1 7.6e-16 58.4 8.1 2.2 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32223.1 - 1.1e-13 51.3 15.3 1.1e-13 51.3 15.3 1.9 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID32224.1 - 4.4e-33 114.7 0.0 7.8e-33 113.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32224.1 - 1.3e-16 60.5 0.6 3.2e-16 59.2 0.1 1.9 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID32224.1 - 1.8e-09 37.9 0.3 7.5e-05 22.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID32224.1 - 0.00024 21.4 1.1 0.0011 19.3 0.2 2.2 2 1 0 2 2 1 1 AAA domain SMC_N PF02463.19 AID32224.1 - 0.00032 20.2 0.1 0.024 14.1 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID32224.1 - 0.001 19.5 0.4 0.085 13.3 0.1 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID32224.1 - 0.0069 16.3 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID32224.1 - 0.0085 16.5 0.1 0.022 15.2 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 AID32224.1 - 0.013 15.1 0.0 0.98 9.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 AID32224.1 - 0.016 14.9 0.0 0.043 13.5 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 AID32224.1 - 0.028 14.7 0.1 0.17 12.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain TOBE PF03459.17 AID32224.1 - 0.031 14.5 0.1 0.62 10.4 0.0 2.5 1 1 1 2 2 2 0 TOBE domain PhoH PF02562.16 AID32224.1 - 0.037 13.5 0.2 0.76 9.2 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein TniB PF05621.11 AID32224.1 - 0.042 13.3 0.1 0.93 8.9 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein Rad17 PF03215.15 AID32224.1 - 0.042 13.8 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_30 PF13604.6 AID32224.1 - 0.044 13.5 0.3 0.19 11.4 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID32224.1 - 0.048 14.2 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID32224.1 - 0.098 12.7 0.1 0.33 11.0 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) sCache_3_2 PF17203.4 AID32224.1 - 0.1 12.8 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Single cache domain 3 AAA_24 PF13479.6 AID32224.1 - 0.11 12.2 0.3 4.9 6.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID32224.1 - 0.12 12.2 0.1 0.28 11.1 0.1 1.6 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 AID32224.1 - 0.16 11.9 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Amidohydro_3 PF07969.11 AID32225.1 - 1.9e-139 466.2 2.2 1.9e-139 466.2 2.2 1.4 2 0 0 2 2 2 1 Amidohydrolase family Amidohydro_1 PF01979.20 AID32225.1 - 2.3e-12 46.9 0.1 8.6e-09 35.1 0.0 3.1 2 1 0 2 2 2 2 Amidohydrolase family TetR_N PF00440.23 AID32226.1 - 4.7e-13 48.7 0.0 8.3e-13 47.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 AID32226.1 - 0.00023 21.9 0.1 0.00065 20.4 0.0 1.8 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain Hist_deacetyl PF00850.19 AID32227.1 - 3e-59 201.0 0.0 4e-59 200.6 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Barstar PF01337.18 AID32227.1 - 0.14 12.2 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Barstar (barnase inhibitor) TMEM43 PF07787.12 AID32228.1 - 1.4e-58 198.3 7.9 5.5e-38 130.8 0.0 2.4 1 1 1 2 2 2 2 Transmembrane protein 43 Wzy_C PF04932.15 AID32228.1 - 0.85 9.2 10.1 17 5.0 0.0 2.4 2 0 0 2 2 2 0 O-Antigen ligase GerE PF00196.19 AID32229.1 - 5e-16 58.0 0.0 7.7e-16 57.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID32229.1 - 8.4e-07 28.6 0.0 1.5e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID32229.1 - 0.00037 19.9 0.0 0.00082 18.8 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_40 PF14493.6 AID32229.1 - 0.0076 16.7 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 AID32229.1 - 0.031 14.5 0.0 0.089 13.0 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 AID32229.1 - 0.033 14.0 0.0 0.092 12.6 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_23 PF13384.6 AID32229.1 - 0.037 13.8 0.0 0.073 12.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 AID32229.1 - 0.052 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 AID32229.1 - 0.23 10.4 0.0 0.32 9.9 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D GerE PF00196.19 AID32230.1 - 1.8e-11 43.4 1.3 2.6e-11 42.9 1.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Autoind_bind PF03472.15 AID32230.1 - 0.0022 17.5 0.2 0.0052 16.3 0.2 1.7 1 1 0 1 1 1 1 Autoinducer binding domain HTH_23 PF13384.6 AID32230.1 - 0.0045 16.7 0.0 0.014 15.2 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 AID32230.1 - 0.0049 16.5 0.2 0.0094 15.6 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_17 PF12728.7 AID32230.1 - 0.058 13.6 0.4 0.32 11.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID32230.1 - 0.12 11.9 0.1 0.21 11.1 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Bac_export_2 PF01312.19 AID32232.1 - 6.3e-105 351.0 5.4 7.2e-105 350.8 5.4 1.0 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family Ribo_biogen_C PF04034.13 AID32232.1 - 0.0044 16.8 0.0 0.025 14.3 0.0 2.0 1 1 1 2 2 2 1 Ribosome biogenesis protein, C-terminal FliG_C PF01706.16 AID32233.1 - 1.9e-17 63.4 0.7 5.1e-16 58.8 0.0 2.3 1 1 1 2 2 2 1 FliG C-terminal domain FliG_M PF14841.6 AID32233.1 - 3.3e-12 46.4 2.6 4.6e-11 42.8 0.8 2.4 2 0 0 2 2 2 1 FliG middle domain FliG_N PF14842.6 AID32233.1 - 0.003 18.1 0.6 0.0071 16.9 0.6 1.7 1 0 0 1 1 1 1 FliG N-terminal domain MgtE_N PF03448.17 AID32233.1 - 0.0033 18.0 2.0 2.8 8.6 0.0 3.3 2 1 0 3 3 3 2 MgtE intracellular N domain FliG_N PF14842.6 AID32234.1 - 1.8e-16 60.5 0.6 2.1e-16 60.3 0.6 1.1 1 0 0 1 1 1 1 FliG N-terminal domain HD_3 PF13023.6 AID32234.1 - 0.12 12.2 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 HD domain FliMN_C PF01052.20 AID32235.1 - 1.2e-22 79.6 0.8 2.1e-22 78.9 0.8 1.4 1 0 0 1 1 1 1 Type III flagellar switch regulator (C-ring) FliN C-term FliMN_C PF01052.20 AID32236.1 - 3.2e-16 59.1 0.0 5.6e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Type III flagellar switch regulator (C-ring) FliN C-term FliM PF02154.15 AID32236.1 - 7.8e-05 22.6 0.0 0.00012 22.0 0.0 1.4 1 1 0 1 1 1 1 Flagellar motor switch protein FliM DUF4424 PF14415.6 AID32236.1 - 0.28 10.4 0.0 0.88 8.8 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4424) MotA_ExbB PF01618.16 AID32237.1 - 1.9e-11 43.8 0.1 4.2e-11 42.7 0.1 1.6 2 0 0 2 2 2 1 MotA/TolQ/ExbB proton channel family DUF1217 PF06748.12 AID32238.1 - 8.4e-80 266.0 14.1 3e-55 186.4 1.3 3.0 2 1 1 3 3 3 3 Protein of unknown function (DUF1217) ASFV_p27 PF06556.11 AID32238.1 - 0.18 11.9 1.5 0.68 10.0 0.8 2.1 1 1 1 2 2 2 0 IAP-like protein p27 C-terminus SwrA PF17423.2 AID32238.1 - 0.73 9.8 4.6 20 5.2 0.1 3.5 3 2 0 3 3 3 0 Swarming motility protein Rotamase_2 PF13145.6 AID32238.1 - 7.3 7.5 10.6 1.8 9.4 2.2 3.2 1 1 2 3 3 3 0 PPIC-type PPIASE domain Flg_bbr_C PF06429.13 AID32239.1 - 2.4e-14 53.2 0.1 5.7e-14 52.0 0.1 1.6 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal Flg_bb_rod PF00460.20 AID32239.1 - 4.7e-12 45.6 0.4 8.3e-12 44.8 0.4 1.4 1 0 0 1 1 1 1 Flagella basal body rod protein Cuticle_1 PF08140.11 AID32239.1 - 0.025 14.6 0.0 6.8 6.8 0.0 2.8 2 0 0 2 2 2 0 Crustacean cuticle protein repeat ATP-synt_ab PF00006.25 AID32240.1 - 9.2e-70 234.6 0.1 3.5e-69 232.7 0.0 1.9 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain T3SS_ATPase_C PF18269.1 AID32240.1 - 9.4e-12 44.6 0.0 1.9e-11 43.6 0.0 1.6 1 0 0 1 1 1 1 T3SS EscN ATPase C-terminal domain RsgA_GTPase PF03193.16 AID32240.1 - 0.0079 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC_tran PF00005.27 AID32240.1 - 0.045 14.3 0.0 0.091 13.3 0.0 1.5 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 AID32240.1 - 0.088 12.7 0.2 4.9 7.0 0.2 3.0 1 1 0 1 1 1 0 NACHT domain DUF87 PF01935.17 AID32240.1 - 0.22 11.6 0.3 0.38 10.8 0.3 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Flg_bb_rod PF00460.20 AID32242.1 - 3.3e-06 26.9 0.7 6.3e-06 26.0 0.7 1.5 1 0 0 1 1 1 1 Flagella basal body rod protein Flg_bbr_C PF06429.13 AID32243.1 - 3.7e-11 43.0 0.2 6.3e-11 42.3 0.2 1.5 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal Flg_bb_rod PF00460.20 AID32243.1 - 2.4e-05 24.2 0.2 5e-05 23.1 0.2 1.6 1 0 0 1 1 1 1 Flagella basal body rod protein Flagellin_C PF00700.21 AID32243.1 - 0.031 14.6 0.8 5.2 7.5 0.0 2.2 2 0 0 2 2 2 0 Bacterial flagellin C-terminal helical region FliE PF02049.18 AID32244.1 - 4.2e-18 65.3 2.7 4.9e-18 65.1 2.7 1.1 1 0 0 1 1 1 1 Flagellar hook-basal body complex protein FliE DUF1414 PF07208.11 AID32244.1 - 0.034 14.1 0.0 0.084 12.9 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) Phage_base_V PF04717.12 AID32244.1 - 0.037 14.0 0.2 0.043 13.7 0.2 1.1 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Flg_bbr_C PF06429.13 AID32245.1 - 4e-25 87.7 0.1 4e-25 87.7 0.1 2.4 3 1 0 3 3 3 1 Flagellar basal body rod FlgEFG protein C-terminal Flg_bb_rod PF00460.20 AID32245.1 - 2.2e-13 49.8 7.2 2.2e-13 49.8 7.2 2.1 2 0 0 2 2 2 1 Flagella basal body rod protein ChapFlgA PF13144.6 AID32246.1 - 7.4e-20 71.2 0.1 1.7e-19 70.1 0.0 1.6 1 1 1 2 2 2 1 Chaperone for flagella basal body P-ring formation SAF PF08666.12 AID32246.1 - 7e-08 33.0 0.3 1.4e-07 32.1 0.3 1.5 1 0 0 1 1 1 1 SAF domain FlgI PF02119.16 AID32247.1 - 8.6e-133 442.5 4.1 9.7e-133 442.3 4.1 1.0 1 0 0 1 1 1 1 Flagellar P-ring protein MgtE_N PF03448.17 AID32248.1 - 0.00026 21.6 0.7 0.00065 20.3 0.6 1.6 1 1 0 1 1 1 1 MgtE intracellular N domain FliG_N PF14842.6 AID32248.1 - 0.037 14.6 1.4 0.097 13.2 0.3 2.2 2 1 1 3 3 3 0 FliG N-terminal domain FliG_M PF14841.6 AID32248.1 - 0.22 11.7 3.1 0.22 11.8 0.7 2.2 2 1 1 3 3 3 0 FliG middle domain FlgH PF02107.16 AID32249.1 - 7.3e-54 181.9 0.2 8.6e-54 181.6 0.2 1.0 1 0 0 1 1 1 1 Flagellar L-ring protein LPAM_1 PF08139.12 AID32249.1 - 0.089 13.3 0.9 0.2 12.2 0.9 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Bactofilin PF04519.13 AID32249.1 - 0.09 13.1 0.0 2.2 8.6 0.0 2.1 2 0 0 2 2 2 0 Polymer-forming cytoskeletal TRAPPC10 PF12584.8 AID32249.1 - 0.16 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 LPAM_2 PF13627.6 AID32249.1 - 4 7.4 5.2 7.4 6.6 5.2 1.4 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site FliL PF03748.14 AID32250.1 - 2.5e-06 28.0 0.0 3.4e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Flagellar basal body-associated protein FliL FliP PF00813.20 AID32251.1 - 6.7e-77 257.7 11.0 7.8e-77 257.5 11.0 1.0 1 0 0 1 1 1 1 FliP family Flagellin_N PF00669.20 AID32252.1 - 1.8e-21 76.7 15.0 1.8e-21 76.7 15.0 3.3 2 1 1 3 3 3 2 Bacterial flagellin N-terminal helical region Flagellin_C PF00700.21 AID32252.1 - 3.5e-15 56.1 25.2 1.1e-14 54.6 6.8 4.0 4 0 0 4 4 4 2 Bacterial flagellin C-terminal helical region Flagellin_N PF00669.20 AID32254.1 - 3.9e-21 75.6 16.6 3.9e-21 75.6 16.6 3.4 2 1 1 3 3 3 2 Bacterial flagellin N-terminal helical region Flagellin_C PF00700.21 AID32254.1 - 1.2e-13 51.2 7.4 1.2e-13 51.2 7.4 3.7 4 0 0 4 4 4 2 Bacterial flagellin C-terminal helical region APG17 PF04108.12 AID32254.1 - 0.056 12.6 2.6 3.4 6.7 0.1 2.2 2 0 0 2 2 2 0 Autophagy protein Apg17 HrpB2 PF09487.10 AID32254.1 - 0.38 11.2 12.9 16 5.9 4.3 3.8 2 2 0 2 2 2 0 Bacterial type III secretion protein (HrpB2) Big_5 PF13205.6 AID32254.1 - 0.42 11.3 9.1 0.064 14.0 4.1 2.2 2 1 0 2 2 2 0 Bacterial Ig-like domain DUF5082 PF16888.5 AID32254.1 - 0.8 10.0 6.1 2.7 8.3 0.0 3.3 3 1 1 4 4 4 0 Domain of unknown function (DUF5082) DASH_Dad2 PF08654.10 AID32254.1 - 3.9 7.9 8.2 0.65 10.5 0.8 3.2 2 1 2 4 4 4 0 DASH complex subunit Dad2 YscJ_FliF PF01514.17 AID32256.1 - 2.6e-60 203.4 0.1 6.2e-60 202.2 0.1 1.6 1 0 0 1 1 1 1 Secretory protein of YscJ/FliF family YscJ_FliF_C PF08345.11 AID32256.1 - 4.4e-33 114.7 16.0 4.7e-33 114.7 11.2 2.3 2 0 0 2 2 2 1 Flagellar M-ring protein C-terminal KfrA_N PF11740.8 AID32257.1 - 1.7 9.4 15.0 0.37 11.5 9.0 2.3 2 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term MotB_plug PF13677.6 AID32258.1 - 7.2e-19 67.1 0.1 1.9e-18 65.8 0.1 1.7 1 0 0 1 1 1 1 Membrane MotB of proton-channel complex MotA/MotB OmpA PF00691.20 AID32258.1 - 2.7e-09 37.3 0.0 7.5e-09 35.8 0.0 1.8 1 0 0 1 1 1 1 OmpA family IL1 PF00340.19 AID32258.1 - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Interleukin-1 / 18 Flg_hook PF02120.16 AID32260.1 - 1e-13 50.9 0.1 2.5e-13 49.7 0.1 1.7 1 0 0 1 1 1 1 Flagellar hook-length control protein FliK SLT PF01464.20 AID32261.1 - 3.9e-09 36.2 0.0 4.8e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase SLT domain Trans_reg_C PF00486.28 AID32262.1 - 1.6e-16 60.1 0.1 3e-16 59.3 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID32262.1 - 1.3e-07 31.8 0.0 4e-07 30.2 0.0 1.8 1 1 0 1 1 1 1 Response regulator receiver domain PIN_5 PF08745.11 AID32262.1 - 0.02 14.3 0.1 0.033 13.6 0.1 1.2 1 0 0 1 1 1 0 PINc domain ribonuclease TIP_N PF12457.8 AID32262.1 - 0.19 12.1 0.0 0.28 11.6 0.0 1.3 1 0 0 1 1 1 0 Tuftelin interacting protein N terminal Flg_bbr_C PF06429.13 AID32263.1 - 5.7e-20 71.2 0.6 2.5e-19 69.2 0.3 2.3 2 0 0 2 2 2 1 Flagellar basal body rod FlgEFG protein C-terminal FlaE PF07559.14 AID32263.1 - 3.1e-13 50.4 7.0 3.1e-13 50.4 7.0 2.5 3 0 0 3 3 3 1 Flagellar basal body protein FlaE Flg_bb_rod PF00460.20 AID32263.1 - 7.8e-13 48.0 2.1 7.8e-13 48.0 2.1 2.6 2 0 0 2 2 2 1 Flagella basal body rod protein PPC PF04151.15 AID32263.1 - 0.36 12.0 14.5 0.69 11.1 0.8 3.9 2 1 1 3 3 3 0 Bacterial pre-peptidase C-terminal domain Flg_bbr_C PF06429.13 AID32264.1 - 3.9e-09 36.5 3.7 3.9e-09 36.5 3.7 2.7 3 0 0 3 3 3 1 Flagellar basal body rod FlgEFG protein C-terminal ApoLp-III PF07464.11 AID32264.1 - 0.059 13.5 0.4 0.15 12.1 0.4 1.7 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Flagellin_N PF00669.20 AID32265.1 - 3.9e-36 124.2 15.2 3.9e-36 124.2 15.2 3.1 2 1 1 3 3 3 2 Bacterial flagellin N-terminal helical region Flagellin_C PF00700.21 AID32265.1 - 1.6e-25 89.2 1.7 1.6e-25 89.2 1.7 3.1 3 0 0 3 3 3 1 Bacterial flagellin C-terminal helical region FlaF PF07309.11 AID32266.1 - 5.9e-35 119.7 0.2 6.4e-35 119.6 0.2 1.0 1 0 0 1 1 1 1 Flagellar protein FlaF Herp-Cyclin PF09241.10 AID32266.1 - 0.068 13.8 0.0 0.086 13.5 0.0 1.2 1 0 0 1 1 1 0 Herpesviridae viral cyclin FlbT PF07378.11 AID32267.1 - 1.9e-43 147.5 0.1 2.1e-43 147.4 0.1 1.0 1 0 0 1 1 1 1 Flagellar protein FlbT FlgD PF03963.14 AID32268.1 - 1.2e-23 83.2 7.1 2e-23 82.5 7.1 1.3 1 0 0 1 1 1 1 Flagellar hook capping protein - N-terminal region FANCD2OS PF15124.6 AID32268.1 - 0.017 15.3 0.6 0.02 15.1 0.6 1.1 1 0 0 1 1 1 0 FANCD2 opposite strand protein FLgD_tudor PF13861.6 AID32268.1 - 0.036 14.3 5.3 0.082 13.2 5.3 2.0 1 1 0 1 1 1 0 FlgD Tudor-like domain Bac_export_3 PF01313.19 AID32269.1 - 2.6e-26 91.3 10.2 3e-26 91.1 10.2 1.0 1 0 0 1 1 1 1 Bacterial export proteins, family 3 Tad PF13400.6 AID32269.1 - 0.17 12.2 6.9 6.8 7.1 0.1 2.2 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like MFS_3 PF05977.13 AID32270.1 - 1.4e-243 809.0 24.7 1.7e-243 808.8 24.7 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1 PF07690.16 AID32270.1 - 4.2e-30 104.9 76.3 7.5e-27 94.2 47.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1897 PF09005.10 AID32270.1 - 0.12 11.8 0.0 0.3 10.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1897) MFS_2 PF13347.6 AID32270.1 - 0.67 8.5 33.3 0.55 8.7 15.2 3.1 1 1 2 3 3 3 0 MFS/sugar transport protein Cupin_3 PF05899.12 AID32271.1 - 2.2e-26 91.3 0.0 2.8e-26 91.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID32271.1 - 1.4e-05 24.7 0.0 1.8e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID32271.1 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.7 AID32271.1 - 0.0082 15.9 0.0 0.009 15.8 0.0 1.2 1 0 0 1 1 1 1 Cupin EutQ PF06249.12 AID32271.1 - 0.0083 15.9 0.0 0.0084 15.9 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding_2 PF14525.6 AID32271.1 - 0.052 13.2 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain DAO PF01266.24 AID32272.1 - 1.3e-49 169.7 9.9 1.6e-49 169.4 9.9 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID32272.1 - 4.1e-08 32.7 0.2 7.8e-08 31.8 0.2 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 AID32272.1 - 6.9e-05 22.2 0.8 0.014 14.6 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID32272.1 - 0.00018 21.7 0.1 0.00048 20.3 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID32272.1 - 0.005 17.4 0.0 0.71 10.5 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID32272.1 - 0.0061 15.3 0.4 2.3 6.8 0.1 2.4 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 AID32272.1 - 0.026 13.8 0.1 0.84 8.8 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID32272.1 - 0.089 11.8 6.3 0.2 10.7 6.3 1.6 1 1 0 1 1 1 0 FAD binding domain ApbA_C PF08546.11 AID32272.1 - 0.14 12.4 0.2 0.31 11.2 0.2 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal ABC_tran PF00005.27 AID32273.1 - 6.3e-32 111.0 0.0 9.6e-32 110.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32273.1 - 2.1e-16 59.8 0.0 1.8e-15 56.9 0.0 2.4 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID32273.1 - 3.3e-05 23.9 1.0 0.031 14.1 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32273.1 - 0.00082 18.9 0.0 0.45 9.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32273.1 - 0.0033 17.1 0.0 0.0097 15.6 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain TOBE PF03459.17 AID32273.1 - 0.047 14.0 0.0 0.15 12.4 0.0 1.9 1 0 0 1 1 1 0 TOBE domain AAA_30 PF13604.6 AID32273.1 - 0.047 13.4 0.1 0.11 12.2 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 AID32273.1 - 0.06 13.7 0.3 0.19 12.1 0.3 2.2 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AID32273.1 - 0.064 13.5 0.2 0.28 11.5 0.2 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID32273.1 - 0.1 12.5 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase T2SSE PF00437.20 AID32273.1 - 0.2 10.7 0.3 0.43 9.6 0.3 1.5 2 0 0 2 2 2 0 Type II/IV secretion system protein BPD_transp_1 PF00528.22 AID32274.1 - 1.3e-14 54.4 18.7 1.3e-14 54.4 18.7 2.1 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component SpoIIM PF01944.17 AID32274.1 - 0.00031 20.8 11.7 0.00031 20.8 11.7 2.1 2 1 1 3 3 3 1 Stage II sporulation protein M BPD_transp_1 PF00528.22 AID32275.1 - 2.9e-10 40.2 19.3 2.9e-10 40.2 19.3 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 AID32276.1 - 5.7e-28 98.5 8.0 5.9e-28 98.5 7.4 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32276.1 - 1.8e-14 54.4 8.0 2.8e-14 53.8 8.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID32276.1 - 6.9e-10 38.7 3.0 2.4e-09 37.0 3.0 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein HTH_31 PF13560.6 AID32277.1 - 5.9e-14 52.2 2.3 1.1e-13 51.3 2.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 AID32277.1 - 6.2e-13 48.3 0.4 1.1e-12 47.5 0.4 1.4 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 AID32277.1 - 2.1e-10 40.5 0.4 3.3e-10 39.8 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID32277.1 - 1.4e-08 34.6 0.0 2.2e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 AID32277.1 - 9.3e-06 25.5 0.2 1.9e-05 24.5 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 AID32277.1 - 0.00026 21.4 0.1 0.00044 20.6 0.1 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain AraC_binding PF02311.19 AID32277.1 - 0.00074 19.4 0.1 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_25 PF13413.6 AID32277.1 - 0.0011 18.7 0.6 0.0031 17.3 0.6 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_6 PF01418.17 AID32277.1 - 0.012 15.6 0.8 3.3 7.8 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain, rpiR family Cupin_3 PF05899.12 AID32277.1 - 0.029 14.1 0.1 0.048 13.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) PhaP_Bmeg PF09602.10 AID32277.1 - 0.036 14.0 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) MannoseP_isomer PF01050.18 AID32277.1 - 0.049 13.5 0.0 0.076 12.9 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase HTH_AsnC-type PF13404.6 AID32277.1 - 0.084 12.7 2.7 0.33 10.8 0.3 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain TetR_N PF00440.23 AID32277.1 - 0.1 12.4 0.1 11 5.9 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_10 PF04967.12 AID32277.1 - 0.12 12.2 0.2 4.9 7.0 0.1 2.4 2 0 0 2 2 2 0 HTH DNA binding domain HTH_24 PF13412.6 AID32277.1 - 0.25 10.9 0.7 0.75 9.4 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Voltage_CLC PF00654.20 AID32278.1 - 6.5e-60 203.2 41.8 6.5e-60 203.2 41.8 2.0 1 1 0 2 2 2 1 Voltage gated chloride channel CBS PF00571.28 AID32278.1 - 0.00049 20.5 1.8 0.26 11.7 0.0 3.3 3 0 0 3 3 3 2 CBS domain Trns_repr_metal PF02583.17 AID32279.1 - 0.089 13.2 0.0 0.11 12.9 0.0 1.0 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor Cupin_2 PF07883.11 AID32280.1 - 5.1e-12 45.3 0.0 1.1e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_7 PF12973.7 AID32280.1 - 3.2e-08 33.4 0.0 4.9e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 ChrR Cupin-like domain Cupin_1 PF00190.22 AID32280.1 - 0.00068 19.3 0.3 0.0027 17.3 0.1 1.9 1 1 1 2 2 2 1 Cupin NAD_binding_10 PF13460.6 AID32281.1 - 3.5e-18 66.1 0.8 5e-18 65.6 0.8 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID32281.1 - 7.5e-13 48.5 0.0 3.6e-12 46.2 0.0 2.0 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 AID32281.1 - 5.9e-07 29.3 0.2 1.3e-06 28.2 0.2 1.5 1 1 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 AID32281.1 - 8.6e-07 28.2 0.0 1.3e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID32281.1 - 1.6e-06 27.4 0.1 6.3e-06 25.5 0.1 2.0 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 AID32281.1 - 3.6e-05 23.1 0.1 0.0004 19.6 0.1 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein F420_oxidored PF03807.17 AID32281.1 - 7.4e-05 23.3 0.0 0.00016 22.2 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GDP_Man_Dehyd PF16363.5 AID32281.1 - 0.00032 20.2 0.0 0.006 16.0 0.0 2.1 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 AID32281.1 - 0.00098 19.4 0.0 0.0019 18.4 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_2 PF03446.15 AID32281.1 - 0.021 15.0 0.1 0.05 13.8 0.1 1.6 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Porphobil_deam PF01379.20 AID32281.1 - 0.031 13.8 0.0 0.041 13.4 0.0 1.2 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain ADH_zinc_N PF00107.26 AID32281.1 - 0.036 14.1 1.2 0.074 13.0 0.3 2.0 2 1 0 2 2 2 0 Zinc-binding dehydrogenase adh_short PF00106.25 AID32281.1 - 0.036 13.5 0.1 0.055 12.9 0.1 1.3 1 0 0 1 1 1 0 short chain dehydrogenase ApbA PF02558.16 AID32281.1 - 0.042 13.5 0.2 0.069 12.8 0.2 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA MarR_2 PF12802.7 AID32282.1 - 4.4e-09 36.1 0.1 8.8e-09 35.1 0.1 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID32282.1 - 1.4e-08 34.5 0.0 2.1e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID32282.1 - 3.5e-05 23.3 0.0 7.8e-05 22.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID32282.1 - 0.00038 20.4 0.1 0.00084 19.3 0.1 1.7 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 AID32282.1 - 0.029 14.9 0.0 0.1 13.1 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain ABM PF03992.16 AID32283.1 - 1.1e-16 60.8 0.0 1.2e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase FHIPEP PF00771.20 AID32284.1 - 1.1e-233 777.5 8.6 1.3e-233 777.2 8.6 1.0 1 0 0 1 1 1 1 FHIPEP family Bac_export_1 PF01311.20 AID32285.1 - 1.6e-43 148.9 24.5 1.8e-43 148.7 24.5 1.0 1 0 0 1 1 1 1 Bacterial export proteins, family 1 Bac_export_3 PF01313.19 AID32285.1 - 5.1 7.1 9.0 3.4 7.7 2.6 3.4 2 1 0 2 2 2 0 Bacterial export proteins, family 3 An_peroxidase PF03098.15 AID32287.1 - 1.2e-10 40.6 0.0 6.2e-07 28.4 0.0 2.3 1 1 1 2 2 2 2 Animal haem peroxidase YcaO PF02624.16 AID32288.1 - 2.2e-42 145.5 0.3 2.7e-42 145.2 0.3 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding BTAD PF03704.17 AID32289.1 - 3.5e-28 98.9 0.3 3.5e-28 98.9 0.3 3.2 4 1 1 5 5 5 1 Bacterial transcriptional activator domain TPR_16 PF13432.6 AID32289.1 - 0.0063 17.1 2.0 2 9.1 0.1 3.8 2 0 0 2 2 2 1 Tetratricopeptide repeat SLATT_2 PF18183.1 AID32289.1 - 0.067 13.0 1.9 0.12 12.2 0.1 2.3 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain 2 Trans_reg_C PF00486.28 AID32289.1 - 0.1 12.7 0.2 0.35 11.0 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal TPR_19 PF14559.6 AID32289.1 - 0.62 10.6 0.0 0.62 10.6 0.0 4.3 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_2 PF07719.17 AID32289.1 - 2.9 8.2 13.5 2 8.7 0.0 5.0 6 0 0 6 6 6 0 Tetratricopeptide repeat An_peroxidase PF03098.15 AID32291.1 - 2e-14 53.1 0.0 3.4e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 Animal haem peroxidase Glyoxalase PF00903.25 AID32292.1 - 1.9e-19 70.1 0.0 2.2e-19 69.9 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32292.1 - 3.7e-11 43.3 0.0 4.6e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID32292.1 - 1.5e-05 25.2 0.0 1.8e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID32292.1 - 4.9e-05 24.1 0.0 5.8e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 AID32292.1 - 0.011 15.7 0.0 0.021 14.7 0.0 1.5 1 1 0 1 1 1 0 Glyoxalase-like domain Acetyltransf_3 PF13302.7 AID32293.1 - 2.6e-25 89.7 0.2 3.1e-25 89.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID32293.1 - 3.1e-06 27.4 0.0 4.1e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 AID32293.1 - 8.7e-06 25.5 0.0 1.7e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID32293.1 - 0.044 13.8 0.1 0.072 13.1 0.1 1.3 1 0 0 1 1 1 0 FR47-like protein Aminopep PF10023.9 AID32294.1 - 6.9e-129 429.8 0.1 7.7e-129 429.7 0.1 1.0 1 0 0 1 1 1 1 Putative aminopeptidase DUF4291 PF14124.6 AID32294.1 - 0.077 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) Rod-binding PF10135.9 AID32295.1 - 1.3e-07 32.1 0.1 3e-07 30.9 0.1 1.7 1 0 0 1 1 1 1 Rod binding protein FlgN PF05130.12 AID32296.1 - 0.0032 18.0 0.5 0.029 14.9 0.5 2.0 1 1 0 1 1 1 1 FlgN protein CmlA_N PF18456.1 AID32296.1 - 0.15 11.4 0.1 0.21 10.9 0.1 1.2 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain FliL PF03748.14 AID32297.1 - 0.056 14.0 0.0 0.08 13.5 0.0 1.2 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL SCP2 PF02036.17 AID32298.1 - 2.7e-16 59.9 0.1 2.9e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 AID32298.1 - 0.0051 17.1 0.0 0.006 16.8 0.0 1.1 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal SCP2_2 PF13530.6 AID32298.1 - 0.079 13.4 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain Acetyltransf_1 PF00583.25 AID32299.1 - 1.2e-08 35.1 0.0 1.7e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID32299.1 - 9.2e-08 32.4 0.0 1.4e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID32299.1 - 0.00017 21.7 0.0 0.00026 21.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID32299.1 - 0.0006 19.8 0.0 0.00094 19.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AID32299.1 - 0.0088 16.2 2.7 0.31 11.2 2.7 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID32299.1 - 0.092 12.9 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Orn_Arg_deC_N PF02784.16 AID32300.1 - 2.6e-57 194.1 0.0 3.2e-57 193.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ala_racemase_N PF01168.20 AID32300.1 - 7.1e-09 35.6 0.0 1e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Orn_DAP_Arg_deC PF00278.22 AID32300.1 - 7.7e-08 32.5 0.0 8.4e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DUF1611_N PF17396.2 AID32300.1 - 0.11 12.7 0.0 2.6 8.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Amidase PF01425.21 AID32301.1 - 3.9e-59 200.8 0.0 4.3e-52 177.6 0.8 2.0 1 1 1 2 2 2 2 Amidase LysR_substrate PF03466.20 AID32302.1 - 6.8e-46 156.3 0.1 1.2e-45 155.5 0.1 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32302.1 - 6.4e-15 54.9 0.3 1.4e-14 53.8 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF1007 PF06226.13 AID32303.1 - 3.6e-57 193.8 0.2 4.1e-57 193.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1007) PIH1 PF08190.12 AID32303.1 - 0.014 14.9 0.4 1.5 8.3 0.1 2.3 2 1 0 2 2 2 0 PIH1 N-terminal domain NicO PF03824.16 AID32304.1 - 4.7e-105 351.0 34.9 1.2e-55 188.9 13.9 2.2 1 1 1 2 2 2 2 High-affinity nickel-transport protein Epimerase PF01370.21 AID32305.1 - 2e-22 79.9 0.0 2.5e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID32305.1 - 1.2e-15 57.3 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 AID32305.1 - 1e-12 48.2 0.0 5.8e-12 45.7 0.0 1.9 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID32305.1 - 3.1e-11 42.9 0.0 5.8e-11 42.0 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 AID32305.1 - 2.9e-05 23.4 0.0 0.057 12.6 0.0 2.9 2 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 AID32305.1 - 0.00022 21.2 0.0 0.00031 20.7 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 AID32305.1 - 0.0063 15.7 0.0 0.022 13.9 0.0 1.8 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Ldh_1_N PF00056.23 AID32305.1 - 0.014 15.5 0.1 0.019 15.0 0.1 1.2 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain KR PF08659.10 AID32305.1 - 0.057 13.3 0.8 0.16 11.8 0.8 1.8 1 1 0 1 1 1 0 KR domain LapA_dom PF06305.11 AID32306.1 - 0.00017 21.4 1.6 0.00017 21.4 1.6 2.0 1 1 1 2 2 2 1 Lipopolysaccharide assembly protein A domain Phage_holin_3_6 PF07332.11 AID32306.1 - 0.00062 19.8 3.6 0.0007 19.6 3.6 1.0 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III PUCC PF03209.15 AID32306.1 - 0.0034 16.5 0.4 0.0036 16.4 0.4 1.1 1 0 0 1 1 1 1 PUCC protein DUF2207 PF09972.9 AID32306.1 - 0.0047 15.8 2.3 0.0048 15.7 2.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF2070 PF09843.9 AID32306.1 - 0.012 14.0 0.9 0.012 14.0 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RseC_MucC PF04246.12 AID32306.1 - 0.055 13.4 1.1 0.063 13.2 1.1 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF4191 PF13829.6 AID32306.1 - 0.061 12.7 1.4 0.063 12.6 1.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF4233 PF14017.6 AID32306.1 - 0.12 12.8 7.3 0.42 11.0 7.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4233) EphA2_TM PF14575.6 AID32306.1 - 0.31 12.0 0.1 0.31 12.0 0.1 1.8 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF5381 PF17353.2 AID32306.1 - 0.35 10.6 2.4 0.39 10.5 2.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF4131 PF13567.6 AID32306.1 - 0.38 10.4 5.7 0.45 10.1 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3290 PF11694.8 AID32306.1 - 0.53 10.3 1.8 0.46 10.4 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) ISK_Channel PF02060.15 AID32306.1 - 2.4 7.9 4.4 0.61 9.8 0.1 1.8 1 1 1 2 2 2 0 Slow voltage-gated potassium channel Cation_efflux PF01545.21 AID32307.1 - 3.2e-44 151.1 18.5 3.9e-44 150.8 18.5 1.1 1 0 0 1 1 1 1 Cation efflux family Clusterin PF01093.17 AID32307.1 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Clusterin Acetyltransf_3 PF13302.7 AID32308.1 - 1.8e-14 54.6 0.0 2.7e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID32308.1 - 1.2e-05 25.6 0.0 2.4e-05 24.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID32308.1 - 0.0091 16.2 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Aminotran_1_2 PF00155.21 AID32309.1 - 3.7e-57 194.2 0.0 4.1e-57 194.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 AID32309.1 - 0.0093 15.0 0.0 1.2 8.0 0.0 2.3 2 1 0 2 2 2 2 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AID32309.1 - 0.044 13.1 0.0 1.3 8.3 0.0 2.1 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_MocR PF12897.7 AID32309.1 - 0.069 11.9 0.0 0.13 11.0 0.0 1.5 1 1 0 1 1 1 0 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 AID32309.1 - 0.12 10.9 0.0 0.5 8.8 0.0 1.7 1 1 1 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme YCII PF03795.14 AID32311.1 - 2.9e-27 94.9 0.0 3.4e-27 94.7 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain adh_short PF00106.25 AID32312.1 - 4.5e-48 163.3 0.1 6.9e-48 162.7 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32312.1 - 3.2e-37 128.3 1.1 4.1e-37 128.0 1.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32312.1 - 6.4e-09 36.0 0.1 1.3e-08 34.9 0.1 1.5 1 1 0 1 1 1 1 KR domain DUF1776 PF08643.10 AID32312.1 - 0.0015 18.0 0.0 0.002 17.5 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Polysacc_synt_2 PF02719.15 AID32312.1 - 0.082 12.0 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ApbA PF02558.16 AID32312.1 - 0.085 12.5 0.3 0.15 11.7 0.3 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Epimerase PF01370.21 AID32312.1 - 0.33 10.4 2.3 0.26 10.7 0.2 2.0 2 1 0 2 2 2 0 NAD dependent epimerase/dehydratase family DUF533 PF04391.12 AID32313.1 - 8.9e-59 198.1 1.9 1.1e-58 197.8 1.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF533) TerB PF05099.13 AID32313.1 - 4.3e-05 23.5 0.2 8.7e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 Tellurite resistance protein TerB UPF0176_N PF17773.1 AID32314.1 - 1.2e-23 83.3 0.0 2.1e-23 82.5 0.0 1.4 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain Rhodanese PF00581.20 AID32314.1 - 1.1e-07 32.3 0.0 2.2e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 Rhodanese-like domain Rhodanese_C PF12368.8 AID32314.1 - 0.00096 19.5 1.0 0.0026 18.1 1.0 1.8 1 1 0 1 1 1 1 Rhodanase C-terminal NosL PF05573.12 AID32314.1 - 0.11 12.8 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 NosL Flavodoxin_5 PF12724.7 AID32314.1 - 0.12 12.6 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 Flavodoxin domain Aldolase PF01081.19 AID32315.1 - 3.9e-71 238.5 0.1 4.4e-71 238.3 0.1 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase PrpR_N PF06506.11 AID32315.1 - 0.035 13.7 0.1 0.56 9.8 0.0 2.2 1 1 1 2 2 2 0 Propionate catabolism activator HMGL-like PF00682.19 AID32315.1 - 0.078 12.5 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 HMGL-like adh_short PF00106.25 AID32316.1 - 1.9e-44 151.5 0.0 2.8e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32316.1 - 1.1e-33 116.8 0.9 1.8e-33 116.0 1.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32316.1 - 2.8e-09 37.1 0.3 9e-09 35.5 0.2 1.8 2 0 0 2 2 2 1 KR domain NAD_binding_10 PF13460.6 AID32316.1 - 0.00038 20.4 1.1 0.00069 19.5 0.9 1.7 1 1 0 1 1 1 1 NAD(P)H-binding B12-binding PF02310.19 AID32316.1 - 0.11 12.6 0.3 0.67 10.0 0.1 2.3 2 1 1 3 3 3 0 B12 binding domain AraC_N PF06719.13 AID32317.1 - 3.6e-44 150.0 0.0 5.2e-44 149.5 0.0 1.2 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus HTH_18 PF12833.7 AID32317.1 - 1.7e-20 73.1 2.7 4.7e-20 71.6 2.7 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32317.1 - 1.3e-12 47.4 0.3 3e-07 30.4 0.1 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_IclR PF09339.10 AID32317.1 - 0.012 15.4 1.7 1.4 8.8 0.5 3.2 2 1 0 2 2 2 0 IclR helix-turn-helix domain DIM PF08194.12 AID32318.1 - 0.02 15.1 0.1 0.024 14.8 0.1 1.2 1 0 0 1 1 1 0 DIM protein DUF4148 PF13663.6 AID32318.1 - 0.024 14.8 0.2 0.024 14.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) TEA PF01285.18 AID32318.1 - 0.028 14.5 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 TEA/ATTS domain Peptidase_M15_2 PF05951.13 AID32320.1 - 7.9e-79 262.7 0.0 1.1e-78 262.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF882) Peptidase_M15_3 PF08291.11 AID32320.1 - 7.4e-08 32.5 0.0 1.3e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase M15 DUF2076 PF09849.9 AID32320.1 - 0.0022 18.1 1.1 0.0022 18.1 1.1 1.7 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2076) T2SSC PF11356.8 AID32320.1 - 0.16 11.9 4.1 0.74 9.7 0.5 2.3 2 0 0 2 2 2 0 Type II secretion system protein C Sigma54_activat PF00158.26 AID32321.1 - 2e-65 219.6 0.0 3e-65 219.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Response_reg PF00072.24 AID32321.1 - 1.5e-22 79.9 0.5 2.5e-22 79.1 0.1 1.6 2 0 0 2 2 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 AID32321.1 - 6.4e-17 62.0 0.0 1.5e-16 60.8 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 AID32321.1 - 6e-15 54.8 0.2 4.2e-14 52.1 0.4 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 AID32321.1 - 4.7e-05 23.4 0.0 0.00011 22.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_50 PF18024.1 AID32321.1 - 0.00017 21.1 0.1 0.00044 19.8 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 AID32321.1 - 0.00024 21.1 0.0 0.0006 19.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 AID32321.1 - 0.00095 19.3 0.0 0.0028 17.7 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain RWP-RK PF02042.15 AID32321.1 - 0.0022 18.0 0.0 0.004 17.1 0.0 1.4 1 0 0 1 1 1 1 RWP-RK domain Mg_chelatase PF01078.21 AID32321.1 - 0.0028 17.1 0.1 0.14 11.5 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI HTH_23 PF13384.6 AID32321.1 - 0.0032 17.2 0.0 0.0078 16.0 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain AAA PF00004.29 AID32321.1 - 0.011 16.1 0.0 0.024 15.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HTH_17 PF12728.7 AID32321.1 - 0.016 15.4 0.0 0.039 14.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain FleQ PF06490.11 AID32321.1 - 0.022 15.1 0.0 0.041 14.3 0.0 1.4 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HTH_22 PF13309.6 AID32321.1 - 0.031 14.3 0.0 0.07 13.2 0.0 1.6 1 0 0 1 1 1 0 HTH domain CENP-B_N PF04218.13 AID32321.1 - 0.034 13.8 0.0 0.093 12.4 0.0 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain TetR_N PF00440.23 AID32321.1 - 0.039 13.7 0.0 0.093 12.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_30 PF13556.6 AID32321.1 - 0.053 13.3 0.0 0.16 11.8 0.0 1.7 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Phage_AlpA PF05930.12 AID32321.1 - 0.084 12.7 0.1 0.19 11.6 0.1 1.5 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) HTH_29 PF13551.6 AID32321.1 - 0.11 12.5 0.0 0.34 11.0 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn helix AAA_2 PF07724.14 AID32321.1 - 0.12 12.5 0.0 0.29 11.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) HTH_19 PF12844.7 AID32321.1 - 0.19 11.8 0.1 0.63 10.1 0.1 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 AID32321.1 - 0.19 12.1 0.0 0.52 10.7 0.0 1.8 1 0 0 1 1 1 0 Transposase Peptidase_M3 PF01432.20 AID32322.1 - 1.2e-38 133.6 0.6 3.4e-33 115.6 0.0 2.1 2 0 0 2 2 2 2 Peptidase family M3 Peptidase_M3_N PF08439.10 AID32322.1 - 2.6e-19 69.2 0.1 1.4e-18 66.9 0.0 2.3 2 0 0 2 2 2 1 Oligopeptidase F Peptidase_M78 PF06114.13 AID32322.1 - 0.077 12.9 0.4 0.56 10.2 0.0 2.4 3 0 0 3 3 3 0 IrrE N-terminal-like domain HEAT_2 PF13646.6 AID32322.1 - 0.3 11.5 0.1 0.3 11.5 0.1 2.1 3 0 0 3 3 3 0 HEAT repeats NUDE_C PF04880.13 AID32324.1 - 0.014 15.9 5.9 0.023 15.2 5.9 1.4 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region HHH_5 PF14520.6 AID32324.1 - 0.015 15.9 0.0 0.039 14.6 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain LapA_dom PF06305.11 AID32324.1 - 0.043 13.6 0.1 0.078 12.8 0.1 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain FAP PF07174.11 AID32324.1 - 0.044 13.2 26.9 0.072 12.5 26.9 1.3 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Filament PF00038.21 AID32324.1 - 0.17 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 Intermediate filament protein Pol_alpha_B_N PF08418.10 AID32324.1 - 0.41 10.6 4.0 0.48 10.4 4.0 1.1 1 0 0 1 1 1 0 DNA polymerase alpha subunit B N-terminal SOG2 PF10428.9 AID32324.1 - 1.4 8.0 6.2 1.6 7.9 6.2 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein SRP-alpha_N PF04086.13 AID32324.1 - 4.1 7.2 7.7 5.2 6.9 7.7 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Chorismate_bind PF00425.18 AID32325.1 - 1e-87 294.0 0.0 1.3e-87 293.7 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Aminotran_4 PF01063.19 AID32326.1 - 1.6e-33 116.4 0.0 1.8e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV YCII PF03795.14 AID32327.1 - 1.2e-13 51.2 0.0 1.5e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 YCII-related domain DUF3445 PF11927.8 AID32328.1 - 1.6e-53 181.7 0.0 2e-53 181.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3445) LysR_substrate PF03466.20 AID32329.1 - 3e-44 150.9 6.2 3e-44 150.9 6.2 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID32329.1 - 2.4e-21 75.4 1.7 3e-21 75.1 0.5 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family adh_short_C2 PF13561.6 AID32330.1 - 2.2e-55 187.7 2.3 2.7e-55 187.5 2.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32330.1 - 1.9e-45 154.7 1.7 2.6e-45 154.3 1.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32330.1 - 2.2e-08 34.2 0.3 3.2e-08 33.7 0.3 1.1 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 AID32330.1 - 0.0041 16.3 0.1 0.0053 15.9 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 AID32330.1 - 0.016 14.7 0.2 0.066 12.7 0.2 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 AID32330.1 - 0.13 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Sacchrp_dh_NADP PF03435.18 AID32331.1 - 1.6e-33 115.7 0.0 3.1e-33 114.8 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Sacchrp_dh_C PF16653.5 AID32331.1 - 3.8e-29 102.6 0.1 9.3e-29 101.3 0.0 1.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase C-terminal domain 5_nucleotid_C PF02872.18 AID32333.1 - 2.7e-39 134.9 0.0 4.5e-39 134.2 0.0 1.4 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 AID32333.1 - 3.6e-13 50.5 0.0 5.9e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase LysM PF01476.20 AID32333.1 - 5.8e-08 32.7 0.0 1.1e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 LysM domain PGA_cap PF09587.10 AID32333.1 - 0.01 15.3 1.0 0.052 13.0 1.0 2.1 1 1 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap PTE PF02126.18 AID32333.1 - 0.029 13.8 0.1 0.05 13.0 0.1 1.3 1 0 0 1 1 1 0 Phosphotriesterase family Ferrochelatase PF00762.19 AID32334.1 - 2.3e-105 352.2 0.0 2.6e-105 352.0 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase HetR_C PF18460.1 AID32334.1 - 0.00042 20.2 0.0 1.2 9.1 0.0 2.5 2 0 0 2 2 2 2 Heterocyst differentiation regulator C-terminal Hood domain CbiX PF01903.17 AID32334.1 - 0.029 14.7 0.0 9 6.7 0.0 2.8 3 0 0 3 3 3 0 CbiX DAO PF01266.24 AID32335.1 - 2.3e-40 139.3 1.4 2.8e-40 139.0 1.4 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 AID32335.1 - 8.3e-08 32.4 0.1 0.006 16.6 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding Pyr_redox_2 PF07992.14 AID32335.1 - 1.4e-05 24.5 0.1 7.8e-05 22.0 0.1 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID32335.1 - 0.00043 19.6 0.0 0.00057 19.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 AID32335.1 - 0.00047 20.7 0.1 0.001 19.6 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID32335.1 - 0.00061 18.9 0.1 0.61 9.1 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_3 PF13738.6 AID32335.1 - 0.00074 18.9 0.0 0.87 8.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID32335.1 - 0.001 18.3 1.5 0.0018 17.5 1.5 1.5 1 1 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 AID32335.1 - 0.0026 16.5 0.6 0.097 11.4 0.4 2.2 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 AID32335.1 - 0.0032 17.7 0.0 0.0078 16.4 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 AID32335.1 - 0.004 16.8 0.2 0.032 13.9 0.1 2.1 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 AID32335.1 - 0.012 15.8 0.0 0.023 14.9 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 AID32335.1 - 0.013 15.7 0.3 0.058 13.7 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain F420_oxidored PF03807.17 AID32335.1 - 0.021 15.4 0.1 0.054 14.1 0.0 1.8 2 0 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent Myosin_N PF02736.19 AID32335.1 - 0.058 13.2 0.3 0.13 12.2 0.3 1.5 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain DUF1188 PF06690.11 AID32335.1 - 0.081 12.5 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Abhydrolase_1 PF00561.20 AID32335.1 - 0.09 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold UDPG_MGDP_dh_N PF03721.14 AID32335.1 - 0.095 12.3 0.2 0.17 11.4 0.2 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GDI PF00996.18 AID32335.1 - 0.11 11.0 0.0 0.16 10.5 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor 3HCDH_N PF02737.18 AID32335.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID32335.1 - 0.16 12.0 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase K_oxygenase PF13434.6 AID32335.1 - 0.24 10.5 0.1 12 4.9 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Band_7 PF01145.25 AID32336.1 - 2.5e-33 115.6 0.6 2.5e-33 115.6 0.6 2.1 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 AID32336.1 - 6e-06 26.2 0.3 1.3e-05 25.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 AID32336.1 - 0.012 15.3 0.1 0.023 14.4 0.1 1.4 1 0 0 1 1 1 0 SPFH domain-Band 7 family Flot PF15975.5 AID32336.1 - 1.9 8.7 11.3 0.75 10.0 6.9 2.5 1 1 2 3 3 3 0 Flotillin NfeD PF01957.18 AID32337.1 - 1.2e-11 44.8 1.0 1.4e-11 44.6 0.0 1.7 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding SIS PF01380.22 AID32338.1 - 1.3e-27 96.2 0.2 2.9e-27 95.1 0.1 1.6 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 AID32338.1 - 1.8e-16 60.3 0.8 2.4e-08 34.3 0.1 3.0 3 0 0 3 3 3 2 CBS domain Regnase_1_C PF18561.1 AID32338.1 - 0.00022 20.9 0.1 0.00046 19.9 0.1 1.5 1 0 0 1 1 1 1 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain SIS_2 PF13580.6 AID32338.1 - 0.039 14.0 1.0 0.36 10.9 0.0 2.3 1 1 1 2 2 2 0 SIS domain DisA_N PF02457.16 AID32338.1 - 0.059 12.9 0.0 2.4 7.8 0.0 2.4 2 0 0 2 2 2 0 DisA bacterial checkpoint controller nucleotide-binding BBP2_2 PF10082.9 AID32339.1 - 1.8e-120 402.2 8.0 2.7e-120 401.7 8.0 1.2 1 0 0 1 1 1 1 Putative beta-barrel porin 2 OMP_b-brl PF13505.6 AID32339.1 - 0.051 13.7 1.1 0.5 10.5 1.1 2.7 1 1 0 1 1 1 0 Outer membrane protein beta-barrel domain Ndc1_Nup PF09531.10 AID32339.1 - 1.6 7.3 6.2 2.1 7.0 6.2 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Herpes_DNAp_acc PF04929.12 AID32339.1 - 1.9 7.4 9.4 2.9 6.8 9.4 1.2 1 0 0 1 1 1 0 Herpes DNA replication accessory factor NTP_transferase PF00483.23 AID32340.1 - 2.1e-22 79.9 0.0 3.5e-22 79.2 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 AID32340.1 - 5.3e-06 26.9 0.0 1.1e-05 25.8 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain SLT_2 PF13406.6 AID32341.1 - 1.6e-99 332.8 0.2 2.1e-99 332.5 0.2 1.1 1 0 0 1 1 1 1 Transglycosylase SLT domain PG_binding_1 PF01471.18 AID32341.1 - 3e-11 43.4 0.3 2.3e-09 37.3 0.1 2.5 2 0 0 2 2 2 1 Putative peptidoglycan binding domain PG_binding_2 PF08823.11 AID32341.1 - 5.2e-05 23.5 0.1 0.037 14.3 0.0 2.6 2 0 0 2 2 2 2 Putative peptidoglycan binding domain SRR1 PF07985.12 AID32341.1 - 0.09 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 SRR1 DUF459 PF04311.13 AID32342.1 - 4.7e-103 344.6 0.0 6.3e-103 344.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF459) Lipase_GDSL_2 PF13472.6 AID32342.1 - 3.4e-08 34.1 0.0 8.1e-08 32.9 0.0 1.7 1 1 1 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID32342.1 - 0.036 14.0 0.0 0.055 13.4 0.0 1.3 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Fer4_20 PF14691.6 AID32343.1 - 7.7e-25 86.9 0.3 1.2e-24 86.2 0.3 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 AID32343.1 - 3.7e-22 78.9 2.6 6.9e-22 78.0 2.6 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID32343.1 - 1.2e-09 38.3 0.1 3.4e-09 36.8 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID32343.1 - 1.5e-08 35.1 0.0 0.0018 18.8 0.0 3.1 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID32343.1 - 2e-07 30.5 0.0 0.0093 15.2 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 AID32343.1 - 8.1e-07 28.7 0.7 2.8e-06 26.9 0.1 1.9 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 AID32343.1 - 5.2e-06 25.4 0.1 2.3e-05 23.3 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 AID32343.1 - 1.9e-05 24.1 0.2 3.5e-05 23.2 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 AID32343.1 - 1.9e-05 24.2 0.0 1.9e-05 24.2 0.0 1.6 2 0 0 2 2 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 AID32343.1 - 2.6e-05 23.7 0.7 0.18 11.1 0.0 2.9 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 AID32343.1 - 3.7e-05 23.0 0.1 0.00013 21.1 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain NAD_binding_7 PF13241.6 AID32343.1 - 9.8e-05 22.7 1.7 0.12 12.9 0.0 2.8 2 1 0 2 2 2 2 Putative NAD(P)-binding DAO PF01266.24 AID32343.1 - 0.0015 18.2 0.1 0.0015 18.2 0.1 2.4 2 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID32343.1 - 0.0015 17.8 0.0 0.0031 16.8 0.0 1.4 1 0 0 1 1 1 1 Thi4 family 2-Hacid_dh_C PF02826.19 AID32343.1 - 0.0018 17.7 0.1 0.045 13.1 0.0 2.7 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIDA PF01134.22 AID32343.1 - 0.0088 15.2 0.0 0.018 14.2 0.0 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A F420_oxidored PF03807.17 AID32343.1 - 0.014 16.0 0.1 0.16 12.6 0.0 2.6 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 AID32343.1 - 0.019 14.8 0.0 0.093 12.6 0.0 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID32343.1 - 0.021 14.8 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.12 AID32343.1 - 0.046 13.3 0.1 0.11 12.1 0.1 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 AID32343.1 - 0.062 13.5 0.1 0.27 11.4 0.0 2.1 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Lycopene_cycl PF05834.12 AID32343.1 - 0.064 12.3 0.2 0.16 11.0 0.1 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 AID32343.1 - 0.065 13.2 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 AID32343.1 - 0.074 12.2 0.1 11 5.0 0.0 2.3 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) AdoHcyase_NAD PF00670.21 AID32343.1 - 0.2 11.7 0.6 11 6.0 0.1 2.3 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GATase_2 PF00310.21 AID32344.1 - 1.1e-185 617.4 0.0 1.4e-185 617.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Glu_synthase PF01645.17 AID32344.1 - 5e-154 512.9 0.2 3.5e-152 506.8 0.1 2.3 2 0 0 2 2 2 2 Conserved region in glutamate synthase Glu_syn_central PF04898.14 AID32344.1 - 3.5e-118 394.1 0.0 2.3e-117 391.4 0.0 2.0 2 0 0 2 2 2 1 Glutamate synthase central domain GXGXG PF01493.19 AID32344.1 - 1.8e-81 272.3 7.3 3.1e-81 271.5 7.3 1.4 1 0 0 1 1 1 1 GXGXG motif FMN_dh PF01070.18 AID32344.1 - 0.041 12.9 0.7 0.092 11.7 0.7 1.5 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Beta_elim_lyase PF01212.21 AID32345.1 - 3.9e-50 170.8 0.1 4.8e-50 170.5 0.1 1.0 1 0 0 1 1 1 1 Beta-eliminating lyase HSP20 PF00011.21 AID32346.1 - 5.2e-19 68.3 0.0 7.1e-19 67.9 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID32346.1 - 0.03 13.9 0.0 0.052 13.1 0.0 1.4 1 0 0 1 1 1 0 HSP20-like domain found in ArsA YabP PF07873.11 AID32346.1 - 0.13 12.1 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 YabP family Sarcoglycan_1 PF04790.13 AID32346.1 - 0.21 10.9 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein Hydrolase_4 PF12146.8 AID32348.1 - 7.9e-46 156.3 0.0 9.6e-46 156.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID32348.1 - 1.4e-17 64.2 0.0 5.3e-17 62.3 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID32348.1 - 1.4e-16 61.8 1.5 1.8e-16 61.4 1.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 AID32348.1 - 0.00013 21.9 0.1 0.0044 16.9 0.0 2.4 2 1 0 2 2 2 1 Serine hydrolase Peptidase_S15 PF02129.18 AID32348.1 - 0.046 13.3 0.0 0.16 11.5 0.0 1.8 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_4 PF08386.10 AID32348.1 - 0.11 12.7 0.0 0.31 11.2 0.0 1.7 2 0 0 2 2 2 0 TAP-like protein LIDHydrolase PF10230.9 AID32348.1 - 0.14 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Thioesterase PF00975.20 AID32348.1 - 0.15 12.1 0.0 0.52 10.4 0.0 1.8 2 0 0 2 2 2 0 Thioesterase domain Arc_trans_TRASH PF08394.10 AID32349.1 - 0.013 15.8 3.7 0.025 14.9 3.6 1.5 1 1 0 1 1 1 0 Archaeal TRASH domain ATPase-cat_bd PF12156.8 AID32349.1 - 0.21 12.3 4.9 0.23 12.2 4.9 1.1 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DUF2757 PF10955.8 AID32349.1 - 4.8 7.5 7.9 0.56 10.5 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2757) DUF1127 PF06568.11 AID32350.1 - 2.1e-12 46.5 3.6 4e-12 45.7 3.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) HTH_18 PF12833.7 AID32352.1 - 3e-17 62.7 0.5 3e-17 62.7 0.5 2.3 2 1 1 3 3 3 2 Helix-turn-helix domain HTH_AraC PF00165.23 AID32352.1 - 2.3e-15 56.2 0.0 2.3e-06 27.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_23 PF13384.6 AID32352.1 - 0.0012 18.5 0.2 0.0012 18.5 0.2 2.5 3 0 0 3 3 3 1 Homeodomain-like domain HTH_31 PF13560.6 AID32352.1 - 0.0063 16.8 8.7 0.082 13.3 8.8 2.7 2 1 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 AID32352.1 - 0.011 16.1 0.0 0.023 15.0 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_10 PF04967.12 AID32352.1 - 0.014 15.2 0.0 0.041 13.7 0.0 1.8 2 0 0 2 2 2 0 HTH DNA binding domain HTH_3 PF01381.22 AID32352.1 - 0.019 15.0 0.0 0.061 13.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix Inositol_P PF00459.25 AID32353.1 - 2.4e-48 165.0 0.0 2.9e-48 164.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FGase PF05013.12 AID32354.1 - 1.2e-71 241.4 0.0 1.5e-71 241.1 0.0 1.1 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase Response_reg PF00072.24 AID32355.1 - 2.5e-22 79.2 0.0 2.8e-22 79.0 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF993 PF06187.11 AID32356.1 - 4.2e-185 615.1 1.8 4.8e-185 614.9 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF993) Peripla_BP_3 PF13377.6 AID32357.1 - 1.7e-31 109.8 0.2 2.8e-31 109.1 0.2 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID32357.1 - 1.2e-26 93.8 0.0 1.5e-26 93.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 AID32357.1 - 7.2e-23 81.5 0.0 8.9e-23 81.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 AID32357.1 - 8.2e-15 54.3 0.1 1.5e-14 53.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_3 PF01381.22 AID32357.1 - 0.0087 16.1 0.0 0.022 14.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix TrmB PF01978.19 AID32357.1 - 0.052 13.4 0.1 0.55 10.2 0.0 2.5 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 AID32357.1 - 0.057 13.2 0.1 1.4 8.8 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain TetR_N PF00440.23 AID32357.1 - 0.07 12.9 0.5 0.2 11.5 0.1 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_IclR PF09339.10 AID32357.1 - 0.088 12.6 0.0 0.22 11.3 0.0 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 AID32357.1 - 0.09 12.7 0.3 0.39 10.6 0.1 2.2 2 0 0 2 2 2 0 MarR family HTH_10 PF04967.12 AID32357.1 - 0.13 12.1 0.1 0.71 9.7 0.0 2.2 3 0 0 3 3 3 0 HTH DNA binding domain GFO_IDH_MocA PF01408.22 AID32358.1 - 2.6e-26 92.8 0.1 4.3e-26 92.1 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID32358.1 - 9.1e-08 32.1 0.0 1.8e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 AID32358.1 - 0.0039 17.8 0.4 0.0085 16.7 0.4 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain CoA_trans PF01144.23 AID32359.1 - 9.4e-35 120.0 0.1 6.4e-31 107.4 0.0 2.4 2 0 0 2 2 2 2 Coenzyme A transferase Mal_decarbox_Al PF16957.5 AID32359.1 - 4.4e-07 28.6 0.1 6.4e-07 28.1 0.1 1.2 1 0 0 1 1 1 1 Malonate decarboxylase, alpha subunit, transporter ECH_1 PF00378.20 AID32360.1 - 4.7e-43 147.3 0.1 5.3e-43 147.1 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID32360.1 - 2e-34 119.6 0.1 2.8e-34 119.1 0.1 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Aldedh PF00171.22 AID32361.1 - 1.6e-163 544.5 0.3 1.9e-163 544.2 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family SBP_bac_1 PF01547.25 AID32362.1 - 2.5e-21 77.0 18.0 2.5e-21 77.0 18.0 2.0 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID32363.1 - 1.6e-17 63.8 12.9 1.6e-17 63.8 12.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID32363.1 - 0.0028 17.6 0.0 0.0028 17.6 0.0 3.0 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C NapE PF06796.11 AID32363.1 - 0.014 14.9 2.8 0.014 14.9 2.8 3.0 3 0 0 3 3 3 0 Periplasmic nitrate reductase protein NapE Mem_trans PF03547.18 AID32363.1 - 1 7.7 10.5 0.82 8.0 4.9 2.3 2 0 0 2 2 2 0 Membrane transport protein BPD_transp_1 PF00528.22 AID32364.1 - 3.6e-17 62.7 21.0 3.6e-17 62.7 21.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID32365.1 - 1.1e-33 116.6 0.0 1.6e-33 116.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID32365.1 - 4.6e-11 43.4 0.1 1.6e-10 41.6 0.1 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 AID32365.1 - 3.3e-09 37.0 0.0 0.0015 18.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID32365.1 - 1.4e-06 28.3 0.2 7.2e-06 26.0 0.1 1.9 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 AID32365.1 - 3.9e-05 23.2 0.0 0.0021 17.5 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID32365.1 - 0.00035 20.9 0.1 0.00092 19.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID32365.1 - 0.00064 19.4 0.1 0.0013 18.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain TOBE_2 PF08402.10 AID32365.1 - 0.0017 18.5 0.0 0.0049 17.0 0.0 1.9 1 0 0 1 1 1 1 TOBE domain AAA_16 PF13191.6 AID32365.1 - 0.0018 18.7 0.0 0.0037 17.7 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID32365.1 - 0.0022 18.5 0.2 0.0038 17.7 0.2 1.3 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID32365.1 - 0.0048 16.8 0.0 0.0078 16.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain MMR_HSR1 PF01926.23 AID32365.1 - 0.012 15.7 0.0 0.027 14.6 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase TOBE PF03459.17 AID32365.1 - 0.016 15.5 0.0 0.061 13.6 0.0 2.0 1 0 0 1 1 1 0 TOBE domain Zeta_toxin PF06414.12 AID32365.1 - 0.024 13.9 0.0 0.042 13.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin FeoB_N PF02421.18 AID32365.1 - 0.032 13.8 0.2 0.21 11.1 0.0 2.2 3 0 0 3 3 2 0 Ferrous iron transport protein B RNA_helicase PF00910.22 AID32365.1 - 0.038 14.4 0.0 0.11 12.9 0.0 1.7 2 0 0 2 2 1 0 RNA helicase AAA_15 PF13175.6 AID32365.1 - 0.04 13.6 0.0 0.084 12.6 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.6 AID32365.1 - 0.05 13.2 1.1 0.062 12.9 0.1 1.6 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 AID32365.1 - 0.06 13.3 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 AID32365.1 - 0.06 13.3 0.2 0.14 12.2 0.1 1.6 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 AID32365.1 - 0.062 13.2 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Septin PF00735.18 AID32365.1 - 0.065 12.5 0.0 0.096 11.9 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_30 PF13604.6 AID32365.1 - 0.071 12.8 0.1 0.16 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 AID32365.1 - 0.089 12.8 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Dynamin family AAA PF00004.29 AID32365.1 - 0.096 13.1 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 AID32365.1 - 0.11 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID32365.1 - 0.11 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID32365.1 - 0.11 12.7 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 AID32365.1 - 0.16 11.2 0.1 0.26 10.4 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain GMC_oxred_C PF05199.13 AID32366.1 - 6.2e-16 59.2 0.0 3.8e-15 56.7 0.0 2.1 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_N PF00732.19 AID32366.1 - 5.7e-09 35.8 0.0 5e-08 32.7 0.0 2.5 2 1 0 2 2 2 1 GMC oxidoreductase DAO PF01266.24 AID32366.1 - 1.5e-06 28.0 0.3 4.6e-06 26.5 0.3 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID32366.1 - 0.00025 20.4 0.0 0.0031 16.8 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID32366.1 - 0.0017 17.5 0.3 0.027 13.6 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 AID32366.1 - 0.013 15.8 0.1 0.029 14.6 0.1 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Mqo PF06039.15 AID32366.1 - 0.096 11.2 0.1 1.7 7.1 0.0 2.0 2 0 0 2 2 2 0 Malate:quinone oxidoreductase (Mqo) adh_short_C2 PF13561.6 AID32367.1 - 6.4e-51 173.2 0.9 7.5e-51 172.9 0.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32367.1 - 2.5e-45 154.4 0.1 3.4e-45 153.9 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32367.1 - 4.7e-11 42.9 0.3 7e-11 42.4 0.3 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_8 PF13450.6 AID32367.1 - 0.067 13.4 0.2 0.61 10.3 0.1 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain GMC_oxred_N PF00732.19 AID32368.1 - 6.5e-91 304.8 0.0 8.5e-91 304.4 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID32368.1 - 1.8e-41 142.0 0.1 2.6e-41 141.5 0.1 1.3 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID32368.1 - 1.4e-07 31.0 0.0 0.0087 15.2 0.0 2.6 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 AID32368.1 - 0.00011 22.4 0.1 0.0017 18.5 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 AID32368.1 - 0.00018 20.7 0.0 0.00029 20.0 0.0 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 AID32368.1 - 0.00048 19.5 0.0 0.036 13.3 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID32368.1 - 0.00052 19.7 0.9 0.004 16.8 0.9 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID32368.1 - 0.0062 15.8 0.1 0.026 13.8 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID32368.1 - 0.041 13.1 0.1 0.062 12.5 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.14 AID32368.1 - 0.1 11.2 0.0 0.16 10.7 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 AID32368.1 - 0.18 11.0 0.0 0.35 10.1 0.0 1.5 1 0 0 1 1 1 0 Thi4 family Dabb PF07876.12 AID32369.1 - 2.4e-19 69.8 0.0 2.6e-19 69.6 0.0 1.0 1 0 0 1 1 1 1 Stress responsive A/B Barrel Domain MFS_1 PF07690.16 AID32370.1 - 1.1e-43 149.6 53.1 3.5e-35 121.6 28.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID32370.1 - 1.2e-33 116.7 28.1 4.3e-25 88.5 10.6 2.5 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID32370.1 - 5.6e-06 25.5 19.2 0.0048 15.8 7.6 2.3 1 1 1 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 AID32370.1 - 7.4e-06 25.5 27.5 1.1e-05 24.9 27.5 1.3 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB SP24 PF16504.5 AID32370.1 - 0.06 13.4 0.3 0.06 13.4 0.3 2.2 3 0 0 3 3 3 0 Putative virion membrane protein of plant and insect virus EamA PF00892.20 AID32371.1 - 5.1e-13 49.4 37.6 6.2e-09 36.1 13.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family Exo_endo_phos PF03372.23 AID32372.1 - 6.1e-08 32.5 0.1 4.3e-07 29.7 0.1 2.3 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Na_H_Exchanger PF00999.21 AID32373.1 - 1e-46 159.5 43.4 1.2e-46 159.3 43.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family ABC_tran PF00005.27 AID32374.1 - 8.5e-36 123.5 0.0 2.5e-35 122.0 0.0 1.7 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 AID32374.1 - 1.2e-13 51.0 0.0 4.6e-13 49.1 0.0 2.1 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID32374.1 - 3.9e-08 33.5 0.0 3.2e-05 23.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32374.1 - 4.2e-05 23.1 0.1 0.00033 20.2 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID32374.1 - 0.00089 19.7 0.2 0.012 16.0 0.2 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID32374.1 - 0.0045 17.4 0.1 0.0082 16.5 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 AID32374.1 - 0.017 15.1 0.0 0.044 13.7 0.0 1.6 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_22 PF13401.6 AID32374.1 - 0.034 14.4 0.1 0.067 13.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain TOBE PF03459.17 AID32374.1 - 0.042 14.1 0.8 0.61 10.4 0.1 2.6 2 0 0 2 2 2 0 TOBE domain ATPase PF06745.13 AID32374.1 - 0.07 12.5 0.0 0.96 8.8 0.0 2.1 2 0 0 2 2 2 0 KaiC AAA_23 PF13476.6 AID32374.1 - 0.079 13.4 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID32374.1 - 0.088 12.7 0.1 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase BPD_transp_1 PF00528.22 AID32375.1 - 1.8e-11 44.1 16.4 1.8e-11 44.1 16.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1418 PF07214.12 AID32375.1 - 1.8 8.5 5.2 1.2 9.0 1.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) BPD_transp_1 PF00528.22 AID32376.1 - 2.3e-11 43.8 13.8 2.3e-11 43.8 13.8 3.1 1 1 2 3 3 3 2 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 AID32377.1 - 5.2e-34 117.7 1.5 8e-34 117.1 1.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32377.1 - 7.5e-24 85.0 8.1 7.5e-24 85.0 8.1 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32377.1 - 1.9e-12 47.4 2.0 3.6e-12 46.5 2.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Fe-ADH PF00465.19 AID32378.1 - 1.1e-110 369.9 1.2 1.3e-110 369.7 1.2 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 AID32378.1 - 9.5e-18 64.8 0.8 2.2e-07 30.9 2.3 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Aldedh PF00171.22 AID32379.1 - 9.7e-120 400.2 2.0 1.1e-119 400.0 2.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Gln-synt_C PF00120.24 AID32380.1 - 5.6e-109 364.3 0.0 6.7e-109 364.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 AID32380.1 - 0.0016 18.1 0.0 0.0032 17.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain AA_permease_2 PF13520.6 AID32381.1 - 2.5e-50 171.6 63.2 3e-50 171.3 63.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 AID32381.1 - 1.8e-25 89.5 48.2 2.8e-25 88.9 48.2 1.2 1 0 0 1 1 1 1 Amino acid permease FGase PF05013.12 AID32382.1 - 3.8e-43 148.2 0.0 4.3e-43 148.0 0.0 1.0 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase SIS PF01380.22 AID32383.1 - 3e-18 65.9 0.0 4.2e-18 65.5 0.0 1.2 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 AID32383.1 - 2.3e-10 40.3 0.0 8.5e-10 38.5 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 AID32383.1 - 0.093 12.8 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 SIS domain HlyD_D23 PF16576.5 AID32384.1 - 5.6e-25 87.8 0.2 1e-24 87.0 0.2 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID32384.1 - 4.7e-15 56.2 3.7 1.1e-13 51.8 0.2 3.0 3 1 0 3 3 3 1 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID32384.1 - 2.9e-10 39.8 0.5 4.7e-08 32.7 0.1 2.9 2 0 0 2 2 2 1 Biotin-lipoyl like RnfC_N PF13375.6 AID32384.1 - 2e-05 24.5 0.8 0.23 11.5 0.0 3.5 1 1 1 3 3 3 2 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 AID32384.1 - 0.0016 18.2 0.0 0.028 14.2 0.0 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme Peptidase_M23 PF01551.22 AID32384.1 - 0.041 14.1 0.3 1.2 9.4 0.0 3.0 2 1 1 3 3 3 0 Peptidase family M23 UQ_con PF00179.26 AID32384.1 - 0.16 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme SecD-TM1 PF13721.6 AID32384.1 - 1.5 9.3 5.4 0.36 11.3 0.5 2.5 3 1 0 3 3 3 0 SecD export protein N-terminal TM region ACR_tran PF00873.19 AID32385.1 - 4.5e-266 885.4 28.9 5.1e-266 885.2 28.9 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 AID32385.1 - 8.6e-05 21.6 58.7 0.018 14.0 16.6 4.1 3 1 0 3 3 3 2 MMPL family AMP-binding_C PF13193.6 AID32385.1 - 0.081 13.9 0.8 0.38 11.8 0.0 2.7 3 0 0 3 3 3 0 AMP-binding enzyme C-terminal domain SRP9-21 PF05486.12 AID32385.1 - 0.14 12.6 0.0 0.27 11.6 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle 9 kDa protein (SRP9) FeS_assembly_P PF01883.19 AID32385.1 - 0.38 11.0 4.4 0.75 10.0 0.6 2.9 2 0 0 2 2 2 0 Iron-sulfur cluster assembly protein GtrA PF04138.14 AID32386.1 - 1.6e-20 73.5 11.1 1.9e-20 73.2 11.1 1.0 1 0 0 1 1 1 1 GtrA-like protein DUF3087 PF11286.8 AID32386.1 - 0.35 10.3 4.4 0.11 11.9 1.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3087) YdjC PF04794.12 AID32387.1 - 5.6e-48 163.9 0.0 6.4e-48 163.8 0.0 1.0 1 0 0 1 1 1 1 YdjC-like protein Glycos_transf_2 PF00535.26 AID32388.1 - 6.9e-20 71.5 0.0 9.7e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID32388.1 - 1.9e-05 24.7 0.0 2.6e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 AID32388.1 - 0.0022 17.5 0.0 0.0037 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 GT87 PF09594.10 AID32389.1 - 6e-12 45.8 31.6 6e-12 45.8 31.6 3.6 3 1 1 4 4 4 1 Glycosyltransferase family 87 EpsG PF14897.6 AID32389.1 - 0.056 12.8 13.6 0.6 9.4 12.6 2.5 1 1 2 3 3 3 0 EpsG family Bcl-2_BAD PF10514.9 AID32389.1 - 0.17 12.4 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 Pro-apoptotic Bcl-2 protein, BAD DUF4191 PF13829.6 AID32389.1 - 2.8 7.2 8.8 0.39 10.0 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4191) CcmH PF03918.14 AID32389.1 - 6.4 6.1 6.3 50 3.2 0.3 3.5 3 0 0 3 3 3 0 Cytochrome C biogenesis protein ADH_zinc_N PF00107.26 AID32390.1 - 2e-12 47.2 0.0 3.9e-12 46.3 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID32390.1 - 2.2e-07 30.7 0.0 1.1e-05 25.3 0.0 2.2 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 AID32390.1 - 0.0028 18.7 0.0 0.0057 17.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AA_permease PF00324.21 AID32390.1 - 0.015 13.9 0.1 0.021 13.5 0.1 1.1 1 0 0 1 1 1 0 Amino acid permease Acyl-CoA_dh_1 PF00441.24 AID32391.1 - 2.5e-31 108.9 4.4 3.7e-31 108.4 4.4 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID32391.1 - 3.4e-19 68.9 0.0 5.6e-19 68.1 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 AID32391.1 - 7.4e-11 42.7 0.1 1.7e-10 41.5 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 AID32391.1 - 3.3e-09 37.1 2.6 5.4e-09 36.4 2.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain adh_short_C2 PF13561.6 AID32392.1 - 1e-55 188.9 3.1 1.1e-55 188.7 3.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32392.1 - 7.4e-51 172.4 0.7 9.1e-51 172.1 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32392.1 - 5.9e-12 45.9 0.3 9.5e-12 45.2 0.3 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID32392.1 - 0.0033 16.9 0.6 0.02 14.4 0.6 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 AID32392.1 - 0.018 14.3 0.1 0.08 12.3 0.1 1.9 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 AID32392.1 - 0.061 12.7 0.0 0.085 12.2 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) MaoC_dehydratas PF01575.19 AID32393.1 - 5.9e-23 80.7 0.0 7.7e-23 80.4 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 AID32393.1 - 3.1e-05 24.1 0.0 3.7e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase APH PF01636.23 AID32394.1 - 2.8e-53 181.3 2.1 4.2e-53 180.7 2.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 AID32394.1 - 0.0004 19.8 0.0 0.00058 19.3 0.0 1.1 1 0 0 1 1 1 1 Ecdysteroid kinase Fructosamin_kin PF03881.14 AID32394.1 - 0.0016 17.7 0.0 0.96 8.6 0.0 2.1 2 0 0 2 2 2 2 Fructosamine kinase Choline_kinase PF01633.20 AID32394.1 - 0.023 14.3 0.0 0.033 13.8 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase RIO1 PF01163.22 AID32394.1 - 0.027 14.1 0.0 0.18 11.4 0.0 2.0 2 0 0 2 2 2 0 RIO1 family adh_short_C2 PF13561.6 AID32395.1 - 1.1e-21 77.4 0.1 1.4e-21 77.1 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32395.1 - 2.2e-21 76.2 0.0 2.6e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32395.1 - 6.8e-05 22.8 0.2 9.6e-05 22.4 0.2 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID32395.1 - 0.0013 18.7 0.2 0.0016 18.4 0.2 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 AID32395.1 - 0.034 13.3 0.0 0.04 13.1 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Ldh_1_N PF00056.23 AID32395.1 - 0.26 11.4 0.7 0.51 10.4 0.4 1.6 1 1 1 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 AID32396.1 - 5e-13 49.1 0.1 5.5e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase TetR_C_33 PF13305.6 AID32397.1 - 8.5e-17 61.8 0.3 2.2e-16 60.5 0.0 1.7 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID32397.1 - 1.4e-12 47.1 0.2 2.3e-12 46.5 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 AID32397.1 - 0.013 15.6 0.0 0.026 14.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 AID32397.1 - 0.055 13.2 0.0 0.25 11.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DUF680 PF05079.12 AID32398.1 - 1.1e-09 38.8 0.1 1.6e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF680) LPAM_1 PF08139.12 AID32398.1 - 0.015 15.7 3.0 0.029 14.9 3.0 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site HdeA PF06411.11 AID32398.1 - 0.14 12.3 1.3 0.18 12.0 1.3 1.2 1 0 0 1 1 1 0 HdeA/HdeB family Cupin_6 PF12852.7 AID32399.1 - 1.4e-34 119.4 0.2 2.4e-34 118.6 0.2 1.3 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 AID32399.1 - 6.7e-20 71.2 1.6 1e-19 70.6 0.3 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32399.1 - 9.3e-15 54.3 0.0 6.1e-06 26.2 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_35 PF13693.6 AID32399.1 - 0.016 15.3 0.2 1.3 9.2 0.1 3.0 2 1 1 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID32399.1 - 0.034 13.9 0.5 0.37 10.6 0.1 2.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain MarR_2 PF12802.7 AID32399.1 - 0.047 13.6 0.1 0.047 13.6 0.1 2.5 2 1 0 2 2 2 0 MarR family TetR_N PF00440.23 AID32399.1 - 0.15 11.9 0.5 0.58 10.0 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family adh_short PF00106.25 AID32400.1 - 2.1e-48 164.4 2.0 2.6e-48 164.1 2.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32400.1 - 3.9e-37 128.0 0.8 5.5e-37 127.6 0.8 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32400.1 - 4.3e-10 39.8 0.3 9.4e-10 38.7 0.3 1.6 1 1 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 AID32400.1 - 0.0003 20.7 0.1 0.00066 19.6 0.1 1.6 1 1 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 AID32400.1 - 0.001 18.6 0.1 0.0021 17.6 0.1 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polyoma_coat2 PF00761.20 AID32400.1 - 0.0085 15.8 1.0 0.013 15.3 0.1 1.6 1 1 1 2 2 2 1 Polyomavirus coat protein RmlD_sub_bind PF04321.17 AID32400.1 - 0.028 13.5 0.0 0.044 12.9 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain NmrA PF05368.13 AID32400.1 - 0.067 12.7 0.1 0.12 11.9 0.1 1.5 1 0 0 1 1 1 0 NmrA-like family DUF1776 PF08643.10 AID32400.1 - 0.12 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) GFO_IDH_MocA PF01408.22 AID32401.1 - 8.3e-19 68.6 0.2 1.6e-18 67.7 0.2 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID32401.1 - 0.00036 20.5 0.1 0.0011 18.9 0.1 1.8 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain OpuAC PF04069.12 AID32401.1 - 0.049 13.2 0.0 0.083 12.4 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system CBP PF12192.8 AID32401.1 - 0.97 9.7 6.5 0.27 11.5 2.5 2.2 2 1 0 2 2 2 0 Fungal calcium binding protein ThuA PF06283.11 AID32402.1 - 4.3e-14 53.2 0.1 5e-14 53.0 0.1 1.1 1 0 0 1 1 1 1 Trehalose utilisation ThuA PF06283.11 AID32403.1 - 0.0018 18.5 0.0 0.0022 18.3 0.0 1.1 1 0 0 1 1 1 1 Trehalose utilisation SoxG PF04268.12 AID32405.1 - 8.6e-53 178.4 0.1 1e-52 178.2 0.1 1.0 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family GCV_T PF01571.21 AID32406.1 - 1.5e-75 254.0 0.1 2.1e-75 253.4 0.1 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SO_alpha_A3 PF17806.1 AID32406.1 - 2.3e-34 117.6 0.1 5.7e-34 116.3 0.1 1.7 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_4 PF13510.6 AID32406.1 - 1.3e-27 95.7 0.0 8.9e-26 89.8 0.0 2.8 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain GCV_T_C PF08669.11 AID32406.1 - 1.3e-21 76.3 0.0 4.1e-21 74.7 0.0 1.9 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Pyr_redox_2 PF07992.14 AID32406.1 - 1.8e-09 37.2 2.4 4.8e-09 35.9 2.4 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID32406.1 - 1.5e-08 34.4 4.2 3.7e-08 33.2 4.2 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID32406.1 - 1.6e-07 30.7 11.2 2.2e-07 30.3 4.0 3.5 2 1 1 3 3 3 1 FAD binding domain HI0933_like PF03486.14 AID32406.1 - 8.5e-06 24.7 1.2 1.5e-05 23.9 1.2 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 AID32406.1 - 6.5e-05 22.2 1.6 0.00015 21.0 1.6 1.6 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 AID32406.1 - 0.00013 22.1 2.5 0.00046 20.4 2.0 2.3 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 AID32406.1 - 0.00028 20.2 0.2 0.00075 18.8 0.2 1.6 1 0 0 1 1 1 1 Thi4 family Fer2_BFD PF04324.15 AID32406.1 - 0.00061 20.1 0.1 0.0014 18.9 0.1 1.6 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain DAO PF01266.24 AID32406.1 - 0.002 17.8 10.7 0.0067 16.1 9.3 2.7 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID32406.1 - 0.0032 16.7 0.7 0.0054 16.0 0.7 1.3 1 0 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 AID32406.1 - 0.0046 16.3 0.8 0.0046 16.3 0.8 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 AID32406.1 - 0.011 15.1 3.5 0.23 10.7 0.3 2.4 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SoxG PF04268.12 AID32406.1 - 0.025 14.7 0.0 0.059 13.5 0.0 1.5 1 0 0 1 1 1 0 Sarcosine oxidase, gamma subunit family Pyr_redox PF00070.27 AID32406.1 - 0.11 13.1 0.8 0.66 10.6 0.7 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID32406.1 - 0.41 9.6 2.4 0.83 8.6 1.8 1.8 2 0 0 2 2 2 0 Lycopene cyclase protein SoxD PF04267.12 AID32407.1 - 2.6e-30 104.4 0.4 2.9e-30 104.2 0.4 1.0 1 0 0 1 1 1 1 Sarcosine oxidase, delta subunit family DAO PF01266.24 AID32409.1 - 4.5e-59 200.8 4.0 5.3e-59 200.6 4.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID32409.1 - 6.3e-06 25.6 0.1 1.6e-05 24.3 0.1 1.6 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 AID32409.1 - 1.2e-05 25.5 0.4 3.6e-05 23.9 0.4 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID32409.1 - 1.6e-05 24.3 1.0 0.058 12.6 1.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID32409.1 - 0.0017 17.5 6.4 0.0038 16.4 6.4 1.6 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 AID32409.1 - 0.003 17.0 0.6 0.0043 16.5 0.1 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 AID32409.1 - 0.0082 15.0 1.4 0.51 9.1 0.4 2.3 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 AID32409.1 - 0.016 14.5 0.6 0.03 13.6 0.6 1.4 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_2 PF07992.14 AID32409.1 - 0.022 14.0 0.5 0.061 12.6 0.1 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF2568 PF10823.8 AID32410.1 - 1.9e-25 88.9 12.8 2.4e-25 88.6 12.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2568) MFS_1 PF07690.16 AID32410.1 - 0.094 11.6 16.3 0.76 8.6 16.3 1.9 1 1 0 1 1 1 0 Major Facilitator Superfamily adh_short_C2 PF13561.6 AID32411.1 - 7.1e-65 218.8 2.4 8.2e-65 218.6 2.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32411.1 - 4.3e-53 179.7 0.2 5.5e-53 179.3 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32411.1 - 4.9e-09 36.3 1.2 9.5e-09 35.4 1.2 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID32411.1 - 0.0092 15.5 0.2 0.04 13.4 0.1 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family P5CR_dimer PF14748.6 AID32411.1 - 0.95 9.7 6.5 1.6 9.0 0.4 2.4 2 0 0 2 2 2 0 Pyrroline-5-carboxylate reductase dimerisation SET PF00856.28 AID32413.1 - 1.8e-12 48.0 0.0 3.1e-09 37.4 0.0 2.1 1 1 1 2 2 2 2 SET domain SAF PF08666.12 AID32413.1 - 0.022 15.4 0.0 0.55 10.9 0.0 2.2 2 0 0 2 2 2 0 SAF domain Ribosomal_S21 PF01165.20 AID32414.1 - 5.8e-20 70.8 8.0 5.8e-20 70.8 8.0 1.8 1 1 1 2 2 2 1 Ribosomal protein S21 CAP59_mtransfer PF11735.8 AID32414.1 - 0.097 12.3 1.0 0.11 12.2 1.0 1.0 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 TPR_1 PF00515.28 AID32415.1 - 6.1e-49 161.9 20.1 4.2e-09 35.9 0.0 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_2 PF07719.17 AID32415.1 - 1.6e-40 134.0 18.2 1.5e-07 30.9 1.4 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 AID32415.1 - 3.6e-35 117.2 11.5 3.3e-06 26.9 0.7 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 AID32415.1 - 4.8e-34 115.8 29.7 1.8e-10 40.3 0.3 7.1 1 1 6 7 7 7 7 TPR repeat TPR_17 PF13431.6 AID32415.1 - 3.7e-27 92.7 17.1 5.5e-05 23.3 0.0 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 AID32415.1 - 1.1e-21 76.9 16.5 7.6e-07 29.3 0.3 5.0 2 1 3 5 5 5 5 Tetratricopeptide repeat TPR_9 PF13371.6 AID32415.1 - 1.7e-19 69.7 5.3 3.9e-06 26.9 0.1 4.7 2 1 1 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 AID32415.1 - 2.9e-16 58.8 8.2 0.00082 20.0 0.6 6.6 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_16 PF13432.6 AID32415.1 - 1.4e-15 57.6 16.8 3.8e-05 24.2 0.9 4.6 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_15 PF13429.6 AID32415.1 - 8e-11 41.7 4.4 0.03 13.6 0.3 5.0 1 1 5 6 6 6 4 Tetratricopeptide repeat TPR_6 PF13174.6 AID32415.1 - 9.6e-11 41.6 15.3 0.11 13.2 0.4 6.6 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 AID32415.1 - 1.8e-10 40.1 7.2 0.02 14.9 0.0 5.7 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 AID32415.1 - 6.7e-08 32.2 20.4 0.038 13.9 0.1 5.8 6 1 0 6 6 5 4 Tetratricopeptide repeat NARP1 PF12569.8 AID32415.1 - 1e-07 31.3 0.4 0.046 12.6 0.0 3.1 2 1 2 4 4 4 3 NMDA receptor-regulated protein 1 TPR_19 PF14559.6 AID32415.1 - 1.8e-06 28.3 19.2 0.18 12.3 1.3 5.2 2 1 2 5 5 5 3 Tetratricopeptide repeat TPR_20 PF14561.6 AID32415.1 - 0.00027 21.2 3.8 0.18 12.1 0.0 3.6 1 1 4 5 5 5 1 Tetratricopeptide repeat BTAD PF03704.17 AID32415.1 - 0.017 15.6 2.8 11 6.4 0.4 3.8 2 2 1 3 3 3 0 Bacterial transcriptional activator domain SHNi-TPR PF10516.9 AID32415.1 - 0.025 14.0 6.8 8.9 5.9 0.1 5.1 6 0 0 6 6 6 0 SHNi-TPR DUF357 PF04010.13 AID32415.1 - 0.051 13.7 5.6 1.8 8.7 0.1 4.1 3 1 2 5 5 4 0 Protein of unknown function (DUF357) DUF5113 PF17140.4 AID32415.1 - 0.093 12.5 3.3 0.81 9.5 0.2 2.9 1 1 2 4 4 4 0 Domain of unknown function (DUF5113) MtrB PF05440.12 AID32415.1 - 0.22 12.0 0.2 5.8 7.4 0.0 3.0 1 1 2 3 3 3 0 Tetrahydromethanopterin S-methyltransferase subunit B FAT PF02259.23 AID32415.1 - 0.22 10.7 2.5 9.7 5.3 0.1 2.8 1 1 1 3 3 3 0 FAT domain RPN7 PF10602.9 AID32415.1 - 0.51 10.0 3.8 11 5.7 0.2 3.3 2 1 1 4 4 4 0 26S proteasome subunit RPN7 MIT PF04212.18 AID32415.1 - 0.59 10.2 13.7 1.1 9.4 1.6 4.8 5 2 1 6 6 5 0 MIT (microtubule interacting and transport) domain DUF992 PF06186.11 AID32416.1 - 4.2e-50 169.3 2.8 5e-50 169.1 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF992) PQQ_3 PF13570.6 AID32416.1 - 0.22 12.1 5.4 2.7 8.6 0.2 2.6 2 0 0 2 2 2 0 PQQ-like domain DUF992 PF06186.11 AID32417.1 - 1.3e-51 174.3 1.5 1.5e-51 174.0 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF992) Gly-zipper_YMGG PF13441.6 AID32417.1 - 6.5 6.6 19.3 3.5 7.4 7.6 2.6 2 0 0 2 2 2 0 YMGG-like Gly-zipper MFS_1 PF07690.16 AID32418.1 - 1.3e-29 103.2 68.9 7e-23 81.1 53.9 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily Response_reg PF00072.24 AID32419.1 - 1e-30 106.2 0.0 1.9e-30 105.3 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID32419.1 - 2.9e-23 81.7 0.4 8.9e-23 80.2 0.3 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Lipoprotein_16 PF03923.13 AID32419.1 - 0.1 12.2 0.0 1.8 8.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized lipoprotein KdpD PF02702.17 AID32420.1 - 5.2e-85 284.2 1.4 9.8e-85 283.3 1.4 1.5 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain DUF4118 PF13493.6 AID32420.1 - 1.4e-30 105.2 13.6 2.3e-30 104.5 13.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4118) HATPase_c PF02518.26 AID32420.1 - 1.9e-21 76.6 0.0 4.3e-21 75.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_3 PF13492.6 AID32420.1 - 1.4e-15 57.8 0.1 3.1e-15 56.6 0.1 1.6 1 0 0 1 1 1 1 GAF domain HisKA PF00512.25 AID32420.1 - 5.6e-15 55.1 1.1 5.8e-14 51.9 0.2 2.9 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain Usp PF00582.26 AID32420.1 - 2e-10 41.3 1.6 3.4e-09 37.3 0.2 3.3 2 1 0 2 2 2 1 Universal stress protein family GAF_2 PF13185.6 AID32420.1 - 3.9e-07 30.5 0.2 3e-06 27.6 0.1 2.6 2 0 0 2 2 2 1 GAF domain GAF PF01590.26 AID32420.1 - 0.0024 18.5 0.0 0.011 16.4 0.0 2.3 1 1 0 1 1 1 1 GAF domain PspB PF06667.12 AID32420.1 - 0.023 14.8 1.9 1.4 9.0 0.0 3.3 3 0 0 3 3 3 0 Phage shock protein B DPBB_1 PF03330.18 AID32420.1 - 0.05 13.9 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Lytic transglycolase MNHE PF01899.16 AID32420.1 - 1.3 8.8 5.7 9.2 6.0 0.0 2.5 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit KdpC PF02669.15 AID32421.1 - 8.6e-79 263.6 0.0 9.7e-79 263.4 0.0 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain E1-E2_ATPase PF00122.20 AID32422.1 - 9e-34 116.6 2.9 9e-34 116.6 2.9 2.4 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 AID32422.1 - 7.5e-32 111.3 4.9 1.2e-31 110.7 4.9 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID32422.1 - 0.0034 17.2 1.3 0.0082 15.9 0.5 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID32422.1 - 0.0043 17.5 0.1 0.025 15.0 0.1 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase CBS PF00571.28 AID32422.1 - 0.028 14.8 0.1 0.082 13.4 0.1 1.8 1 0 0 1 1 1 0 CBS domain KdpA PF03814.15 AID32424.1 - 6.5e-252 836.6 32.7 7.5e-252 836.4 32.7 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit Potass_KdpF PF09604.10 AID32425.1 - 1.1e-07 31.6 2.7 1.5e-07 31.2 2.7 1.2 1 0 0 1 1 1 1 F subunit of K+-transporting ATPase (Potass_KdpF) DUF892 PF05974.12 AID32426.1 - 4.7e-60 202.2 4.0 5.9e-60 201.9 4.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF892) DUF1657 PF07870.11 AID32426.1 - 0.01 15.7 0.4 0.02 14.8 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) HTH_Crp_2 PF13545.6 AID32427.1 - 1.6e-13 50.4 0.0 3.3e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain cNMP_binding PF00027.29 AID32427.1 - 1.9e-08 34.3 0.0 2.9e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Crp PF00325.20 AID32427.1 - 1.7e-05 24.4 1.0 5.6e-05 22.7 0.0 2.4 3 0 0 3 3 3 1 Bacterial regulatory proteins, crp family HTH_24 PF13412.6 AID32427.1 - 0.095 12.3 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF4878 PF12870.7 AID32428.1 - 0.019 15.3 0.0 0.021 15.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4878) DUF982 PF06169.12 AID32430.1 - 1.6e-19 69.7 0.1 2.2e-19 69.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF982) Acyl_transf_3 PF01757.22 AID32431.1 - 4e-18 65.6 40.0 4e-18 65.6 40.0 1.4 2 0 0 2 2 2 1 Acyltransferase family Phage_integrase PF00589.22 AID32433.1 - 3.2e-09 36.8 0.0 8.8e-09 35.4 0.0 1.7 2 0 0 2 2 2 1 Phage integrase family TIR-like PF10137.9 AID32434.1 - 1.4e-35 121.8 0.0 2.4e-35 121.0 0.0 1.4 1 0 0 1 1 1 1 Predicted nucleotide-binding protein containing TIR-like domain Cytochrom_B561 PF03188.16 AID32436.1 - 0.015 15.5 3.8 0.015 15.5 3.8 1.7 1 1 0 1 1 1 0 Eukaryotic cytochrome b561 Synaptobrevin PF00957.21 AID32436.1 - 0.17 11.7 0.6 0.45 10.3 0.1 1.8 2 0 0 2 2 2 0 Synaptobrevin DUF4145 PF13643.6 AID32437.1 - 0.00014 21.9 0.0 0.00019 21.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) Resolvase PF00239.21 AID32438.1 - 9.2e-32 110.2 0.5 1.6e-31 109.4 0.5 1.4 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_7 PF02796.15 AID32438.1 - 7.2e-05 22.8 0.1 0.00022 21.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 AID32438.1 - 0.0066 16.2 0.1 0.02 14.7 0.0 1.8 2 0 0 2 2 2 1 Homeodomain-like domain DUF4350 PF14258.6 AID32438.1 - 0.013 15.9 0.0 0.028 14.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) HTH_29 PF13551.6 AID32438.1 - 0.058 13.4 0.4 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn helix GerE PF00196.19 AID32438.1 - 0.12 12.0 0.0 0.57 9.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family SRAP PF02586.14 AID32440.1 - 9.9e-23 80.8 0.0 1.2e-22 80.6 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) PKcGMP_CC PF16808.5 AID32441.1 - 3.9e-06 26.6 1.0 6.1e-06 26.0 1.0 1.3 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF465 PF04325.13 AID32441.1 - 0.066 13.3 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF465) DUF3375 PF11855.8 AID32441.1 - 0.073 12.0 0.5 0.081 11.8 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) DUF1117 PF06547.12 AID32441.1 - 0.08 13.5 0.4 1.5 9.4 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1117) DUF1658 PF07871.11 AID32444.1 - 0.094 12.7 1.8 0.22 11.5 1.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1658) DUF2569 PF10754.9 AID32447.1 - 2.9e-05 24.5 2.1 2.9e-05 24.5 2.1 3.0 2 2 2 4 4 4 1 Protein of unknown function (DUF2569) CPP1-like PF11833.8 AID32447.1 - 0.19 11.3 0.3 0.19 11.3 0.3 3.0 2 1 0 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Bmp PF02608.14 AID32449.1 - 1.2e-53 182.1 3.4 1.4e-53 181.9 3.4 1.0 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Acetyltransf_1 PF00583.25 AID32450.1 - 1.6e-12 47.7 0.1 1.9e-12 47.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID32450.1 - 3.1e-10 40.3 0.0 4.5e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID32450.1 - 1.1e-08 35.1 0.0 1.4e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID32450.1 - 3.1e-06 27.3 0.0 4.7e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID32450.1 - 0.00033 21.3 0.0 0.00078 20.1 0.0 1.5 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID32450.1 - 0.0018 18.4 0.0 0.0023 18.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID32450.1 - 0.0023 17.9 0.1 0.0078 16.2 0.1 1.9 1 1 1 2 2 2 1 FR47-like protein SlyX PF04102.12 AID32452.1 - 6.8e-20 71.5 0.8 7.4e-20 71.3 0.8 1.0 1 0 0 1 1 1 1 SlyX XhlA PF10779.9 AID32452.1 - 0.0017 18.6 0.1 2 8.7 0.0 2.0 2 0 0 2 2 2 2 Haemolysin XhlA Spc29 PF17082.5 AID32452.1 - 0.044 13.6 0.1 0.048 13.5 0.1 1.0 1 0 0 1 1 1 0 Spindle Pole Component 29 Holin_BhlA PF10960.8 AID32452.1 - 0.052 13.5 0.3 0.14 12.2 0.3 1.6 1 1 1 2 2 2 0 BhlA holin family DUF3782 PF12644.7 AID32452.1 - 0.085 13.0 0.3 0.1 12.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) ABC_tran PF00005.27 AID32453.1 - 3.8e-46 157.0 0.0 1.2e-26 93.8 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID32453.1 - 2e-08 34.4 1.6 0.00041 20.2 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID32453.1 - 0.00017 21.2 0.2 0.021 14.6 0.0 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID32453.1 - 0.0012 19.3 0.3 0.0037 17.8 0.1 1.8 1 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 AID32453.1 - 0.0019 18.0 0.1 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 AID32453.1 - 0.0022 17.5 1.3 0.094 12.1 0.1 2.9 3 0 0 3 3 3 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID32453.1 - 0.004 17.1 3.1 0.18 11.7 0.0 3.0 3 1 1 4 4 4 1 RsgA GTPase AAA_30 PF13604.6 AID32453.1 - 0.0069 16.1 1.5 0.2 11.3 0.1 3.0 2 1 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 AID32453.1 - 0.0074 16.4 0.2 0.11 12.6 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_27 PF13514.6 AID32453.1 - 0.016 14.8 0.0 0.036 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain YwpF PF14183.6 AID32453.1 - 0.026 14.5 0.2 5.5 7.0 0.1 2.4 2 0 0 2 2 2 0 YwpF-like protein Dynamin_N PF00350.23 AID32453.1 - 0.1 12.7 0.0 13 5.8 0.0 2.4 2 0 0 2 2 2 0 Dynamin family AAA_22 PF13401.6 AID32453.1 - 0.21 11.9 0.6 3 8.1 0.6 2.4 1 1 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID32454.1 - 6.9e-35 120.5 34.6 6.9e-35 120.5 34.6 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ATP-synt_J PF04911.12 AID32454.1 - 0.44 10.2 2.2 3.9 7.1 0.1 2.6 2 0 0 2 2 2 0 ATP synthase j chain BPD_transp_2 PF02653.16 AID32455.1 - 4.7e-26 91.5 22.6 2.3e-25 89.3 14.7 2.1 1 1 1 2 2 2 2 Branched-chain amino acid transport system / permease component dCMP_cyt_deam_1 PF00383.23 AID32456.1 - 2e-13 50.1 0.1 2.3e-13 49.8 0.1 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_2 PF08211.12 AID32456.1 - 1.8e-12 47.6 0.1 2.4e-12 47.2 0.1 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region LmjF365940-deam PF14421.6 AID32456.1 - 0.01 15.4 0.6 1 8.9 0.0 2.1 1 1 1 2 2 2 0 A distinct subfamily of CDD/CDA-like deaminases SNAD4 PF18750.1 AID32456.1 - 0.084 13.0 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 PNP_UDP_1 PF01048.20 AID32457.1 - 1.6e-48 165.0 0.9 1.8e-48 164.8 0.9 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Glycos_transf_3 PF00591.21 AID32458.1 - 2.5e-40 138.7 2.9 3.9e-40 138.0 2.9 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 AID32458.1 - 5.2e-22 77.3 0.1 1.2e-21 76.1 0.1 1.7 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 AID32458.1 - 9e-22 76.7 3.5 3.5e-21 74.8 0.3 3.0 3 0 0 3 3 3 1 Glycosyl transferase family, helical bundle domain gag-asp_proteas PF13975.6 AID32459.1 - 6.3e-24 84.4 1.0 9.5e-24 83.8 1.0 1.3 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 AID32459.1 - 8.1e-21 74.5 1.4 1.3e-20 73.8 1.4 1.3 1 0 0 1 1 1 1 Aspartyl protease Neocarzinostat PF00960.18 AID32459.1 - 0.0067 16.4 0.5 0.011 15.7 0.4 1.4 1 1 0 1 1 1 1 Neocarzinostatin family RVP PF00077.20 AID32459.1 - 0.051 13.9 0.2 0.16 12.3 0.2 1.8 1 1 0 1 1 1 0 Retroviral aspartyl protease XdhC_CoxI PF02625.16 AID32459.1 - 0.096 12.9 4.5 0.82 9.9 0.7 3.0 2 1 1 3 3 3 0 XdhC and CoxI family DUF3737 PF12541.8 AID32459.1 - 0.12 11.6 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3737) UPRTase PF14681.6 AID32460.1 - 1.6e-30 106.1 0.0 2.1e-30 105.7 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase A_deaminase PF00962.22 AID32461.1 - 1.2e-62 212.2 0.0 1.5e-62 211.8 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_1 PF01979.20 AID32461.1 - 0.046 13.0 0.0 0.071 12.4 0.0 1.4 1 1 0 1 1 1 0 Amidohydrolase family Ubie_methyltran PF01209.18 AID32462.1 - 7e-87 290.6 0.0 8.6e-87 290.3 0.0 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 AID32462.1 - 9.6e-20 71.1 0.1 2.1e-19 70.0 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32462.1 - 1.9e-17 63.7 0.0 4e-17 62.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32462.1 - 7.4e-16 58.3 0.0 1.2e-15 57.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32462.1 - 4.5e-09 36.9 0.0 7.8e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32462.1 - 2.2e-07 30.8 0.0 3.2e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID32462.1 - 0.013 15.1 0.0 0.045 13.3 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase small domain ABC1 PF03109.16 AID32463.1 - 1.4e-26 92.9 0.0 2.9e-26 92.0 0.0 1.5 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 AID32463.1 - 0.00022 20.9 0.0 0.00043 19.9 0.0 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.25 AID32463.1 - 0.00024 20.5 0.0 0.00082 18.8 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain APH PF01636.23 AID32463.1 - 0.003 17.5 3.2 0.0071 16.3 1.0 3.0 2 1 0 2 2 2 1 Phosphotransferase enzyme family Gp23 PF07068.11 AID32463.1 - 0.055 12.2 0.0 0.083 11.6 0.0 1.2 1 0 0 1 1 1 0 Major capsid protein Gp23 DFP PF04127.15 AID32464.1 - 2.5e-67 226.3 0.4 1.7e-66 223.6 0.0 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 AID32464.1 - 2.2e-43 147.7 0.1 4.8e-43 146.7 0.1 1.6 1 0 0 1 1 1 1 Flavoprotein YjeF_N PF03853.15 AID32464.1 - 0.00035 20.5 0.5 0.061 13.2 0.1 2.5 2 0 0 2 2 2 2 YjeF-related protein N-terminus RHH_1 PF01402.21 AID32464.1 - 0.0029 17.5 1.3 0.0029 17.5 1.3 2.7 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family NAD_binding_7 PF13241.6 AID32464.1 - 0.0035 17.8 0.2 0.2 12.1 0.1 3.0 2 0 0 2 2 2 1 Putative NAD(P)-binding Glyco_trans_4_4 PF13579.6 AID32464.1 - 0.037 14.5 10.5 0.75 10.2 2.1 2.9 2 2 0 2 2 2 0 Glycosyl transferase 4-like domain Mur_ligase PF01225.25 AID32464.1 - 0.061 13.7 0.8 3.9 7.9 0.1 3.3 3 0 0 3 3 3 0 Mur ligase family, catalytic domain Arc PF03869.14 AID32464.1 - 0.35 10.8 1.6 0.81 9.6 0.6 2.1 2 0 0 2 2 2 0 Arc-like DNA binding domain IalB PF06776.12 AID32465.1 - 5e-33 114.0 0.1 6.5e-33 113.6 0.1 1.1 1 0 0 1 1 1 1 Invasion associated locus B (IalB) protein DUF1176 PF06674.11 AID32465.1 - 0.0059 16.1 0.1 0.0078 15.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) DUF2547 PF10818.8 AID32466.1 - 0.025 15.5 4.7 0.03 15.2 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) NUDIX PF00293.28 AID32467.1 - 4.8e-06 26.6 0.1 5.6e-06 26.4 0.1 1.0 1 0 0 1 1 1 1 NUDIX domain Citrate_synt PF00285.21 AID32468.1 - 3.2e-35 121.9 0.0 2.5e-27 95.9 0.0 2.0 1 1 1 2 2 2 2 Citrate synthase, C-terminal domain TctA PF01970.16 AID32469.1 - 2.2e-142 474.6 40.6 2.6e-142 474.4 40.6 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family TctB PF07331.11 AID32470.1 - 3.5e-19 69.4 13.5 4.9e-19 68.9 13.5 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family RhodobacterPufX PF11511.8 AID32470.1 - 0.095 12.3 1.3 0.25 11.0 0.1 2.4 1 1 2 3 3 3 0 Intrinsic membrane protein PufX DUF3488 PF11992.8 AID32470.1 - 0.14 11.1 5.0 0.11 11.4 4.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3488) DUF4131 PF13567.6 AID32470.1 - 5.2 6.7 12.6 1.4 8.6 0.3 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) TctC PF03401.14 AID32471.1 - 8.3e-30 103.8 0.0 1e-29 103.5 0.0 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor HTH_IclR PF09339.10 AID32473.1 - 6.6e-14 51.4 2.3 4.7e-13 48.7 2.8 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain IclR PF01614.18 AID32473.1 - 7.5e-06 25.8 0.0 0.00036 20.4 0.0 2.6 2 1 1 3 3 3 1 Bacterial transcriptional regulator HTH_47 PF16221.5 AID32473.1 - 0.011 15.2 0.2 0.029 13.9 0.2 1.7 1 0 0 1 1 1 0 winged helix-turn-helix Autoind_bind PF03472.15 AID32473.1 - 0.012 15.1 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Autoinducer binding domain HTH_24 PF13412.6 AID32473.1 - 0.013 15.0 0.2 0.04 13.5 0.2 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID32473.1 - 0.021 14.7 1.8 0.043 13.7 1.0 1.9 2 0 0 2 2 2 0 MarR family EAL PF00563.20 AID32474.1 - 5.6e-64 215.9 0.0 1.7e-63 214.3 0.0 1.8 2 0 0 2 2 2 1 EAL domain GGDEF PF00990.21 AID32474.1 - 4.4e-43 146.8 0.0 7.9e-43 146.0 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_4 PF08448.10 AID32474.1 - 2.1e-13 50.5 0.1 5.4e-13 49.2 0.1 1.8 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID32474.1 - 3e-05 24.2 0.0 7.6e-05 22.9 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 AID32474.1 - 0.0002 21.5 0.0 0.0083 16.3 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 AID32474.1 - 0.0045 17.0 0.0 0.0095 15.9 0.0 1.5 1 0 0 1 1 1 1 PAS fold Acetyltransf_3 PF13302.7 AID32475.1 - 4.9e-22 79.1 0.2 5.8e-22 78.9 0.2 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID32475.1 - 0.043 14.1 0.1 0.053 13.7 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF2214 PF09980.9 AID32476.1 - 1.7e-46 157.6 6.1 1.9e-46 157.5 6.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2214) PIG-Y PF15159.6 AID32476.1 - 0.077 13.9 4.0 0.11 13.4 0.1 2.3 1 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y TctC PF03401.14 AID32477.1 - 4.9e-71 239.0 0.1 5.7e-71 238.8 0.1 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor SBP_bac_8 PF13416.6 AID32477.1 - 2.3e-05 24.4 0.1 3.1e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein AIRC PF00731.20 AID32477.1 - 0.0098 15.5 0.2 0.028 14.0 0.2 1.8 1 0 0 1 1 1 1 AIR carboxylase TctB PF07331.11 AID32478.1 - 5.1e-19 68.9 22.8 6.8e-19 68.5 22.8 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family DUF2070 PF09843.9 AID32478.1 - 0.21 9.8 5.1 0.27 9.5 5.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TctA PF01970.16 AID32479.1 - 1.2e-147 491.9 44.6 1.7e-147 491.4 44.6 1.2 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family HhH-GPD PF00730.25 AID32480.1 - 4.2e-19 69.0 0.0 6.1e-19 68.5 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 AID32480.1 - 3.6e-10 39.2 0.0 7.3e-10 38.2 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 AID32480.1 - 6.1e-05 23.2 8.4 0.00012 22.3 8.4 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 AID32480.1 - 0.049 14.2 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain DUF2244 PF10003.9 AID32481.1 - 1.5e-47 160.8 0.2 1.7e-47 160.6 0.2 1.0 1 0 0 1 1 1 1 Integral membrane protein (DUF2244) LCM PF04072.14 AID32482.1 - 4.1e-17 62.7 0.0 5.2e-16 59.1 0.0 2.3 1 1 0 1 1 1 1 Leucine carboxyl methyltransferase DNA_binding_1 PF01035.20 AID32483.1 - 1.6e-28 98.6 0.0 3.1e-28 97.7 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain HTH_18 PF12833.7 AID32483.1 - 1.2e-16 60.8 0.0 3.4e-16 59.3 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32483.1 - 0.012 15.7 0.0 0.13 12.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF3551 PF12071.8 AID32487.1 - 0.029 14.4 1.5 0.32 11.1 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3551) PfkB PF00294.24 AID32489.1 - 2.4e-55 188.0 5.9 2.7e-55 187.8 5.9 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID32489.1 - 0.028 13.8 0.1 0.056 12.8 0.1 1.4 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Amidase PF01425.21 AID32490.1 - 7e-88 295.5 0.0 9.5e-88 295.1 0.0 1.2 1 0 0 1 1 1 1 Amidase LysE PF01810.18 AID32491.1 - 2.6e-31 108.6 14.2 3e-31 108.4 14.2 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 AID32491.1 - 0.00036 20.3 2.1 0.00036 20.3 2.1 2.0 1 1 1 2 2 2 1 Integral membrane protein TerC family DUF2919 PF11143.8 AID32491.1 - 0.01 16.2 0.6 0.02 15.2 0.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) IU_nuc_hydro PF01156.19 AID32492.1 - 2.6e-94 316.2 0.0 3.2e-94 315.9 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase HSP20 PF00011.21 AID32493.1 - 1e-16 60.9 0.0 1.4e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 AID32493.1 - 0.001 18.6 0.0 0.0019 17.7 0.0 1.5 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DUF1150 PF06620.11 AID32494.1 - 8e-29 99.6 0.0 9.1e-29 99.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1150) PTS_EIIA_2 PF00359.22 AID32495.1 - 9.2e-34 116.4 0.0 1e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Chrome_Resist PF09828.9 AID32495.1 - 0.15 12.5 0.1 0.37 11.2 0.2 1.5 2 0 0 2 2 2 0 Chromate resistance exported protein Ribosom_S30AE_C PF16321.5 AID32496.1 - 5.9e-17 61.1 0.0 1.2e-16 60.1 0.0 1.5 1 0 0 1 1 1 1 Sigma 54 modulation/S30EA ribosomal protein C terminus Ribosomal_S30AE PF02482.19 AID32496.1 - 3.6e-14 53.3 0.0 5.5e-14 52.7 0.0 1.3 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Sigma54_DBD PF04552.13 AID32497.1 - 1.9e-72 242.2 0.1 4.3e-72 241.0 0.1 1.6 2 0 0 2 2 2 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 AID32497.1 - 1.4e-45 155.3 0.0 4.2e-45 153.8 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain Sigma54_AID PF00309.20 AID32497.1 - 1.6e-18 66.3 5.9 3.2e-18 65.3 5.9 1.6 1 0 0 1 1 1 1 Sigma-54 factor, Activator interacting domain (AID) HTH_38 PF13936.6 AID32497.1 - 0.0058 16.4 0.0 0.47 10.3 0.0 3.0 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_23 PF13384.6 AID32497.1 - 0.0075 16.0 0.1 1.5 8.7 0.0 3.5 3 0 0 3 3 3 1 Homeodomain-like domain HTH_3 PF01381.22 AID32497.1 - 0.011 15.8 0.4 0.89 9.7 0.0 3.5 4 0 0 4 4 4 0 Helix-turn-helix HTH_IclR PF09339.10 AID32497.1 - 0.017 14.9 0.2 0.36 10.7 0.0 2.9 2 1 0 2 2 2 0 IclR helix-turn-helix domain MarR PF01047.22 AID32497.1 - 0.033 14.1 0.0 6.4 6.8 0.0 2.7 2 0 0 2 2 2 0 MarR family Arg_repressor PF01316.21 AID32497.1 - 0.037 13.8 0.0 0.11 12.2 0.0 1.8 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HTH_Crp_2 PF13545.6 AID32497.1 - 0.055 13.4 0.2 4.1 7.4 0.0 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_AraC PF00165.23 AID32497.1 - 0.18 11.9 0.0 1.7 8.8 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family ABC_tran PF00005.27 AID32498.1 - 1.4e-31 109.9 0.0 2e-31 109.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32498.1 - 8.9e-08 32.3 0.9 0.00014 21.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 AID32498.1 - 3e-05 23.8 0.0 3e-05 23.8 0.0 1.9 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.19 AID32498.1 - 0.0035 16.8 0.1 0.88 9.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID32498.1 - 0.071 13.3 0.2 0.98 9.7 0.1 2.6 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DNA_pol3_gamma3 PF12169.8 AID32498.1 - 0.088 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III AAA_24 PF13479.6 AID32498.1 - 0.15 11.7 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain OstA PF03968.14 AID32499.1 - 1.7e-25 89.4 0.9 2.2e-25 89.1 0.9 1.1 1 0 0 1 1 1 1 OstA-like protein OstA_2 PF13100.6 AID32499.1 - 0.0032 17.1 0.1 2.5 7.7 0.0 2.1 2 0 0 2 2 2 2 OstA-like protein LptC PF06835.13 AID32500.1 - 1.1e-10 41.3 0.5 6.3e-08 32.4 0.3 2.0 1 1 1 2 2 2 2 Lipopolysaccharide-assembly, LptC-related OstA PF03968.14 AID32500.1 - 0.018 15.3 1.2 0.87 9.8 0.1 2.5 1 1 2 3 3 3 0 OstA-like protein Peptidase_S49 PF01343.18 AID32501.1 - 3e-42 144.2 0.0 4.3e-42 143.7 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 AID32501.1 - 1.5e-06 27.4 0.2 2.2e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 AID32501.1 - 1.6e-06 28.2 0.4 6.7e-06 26.1 0.2 1.8 2 0 0 2 2 2 1 Clp protease ECH_1 PF00378.20 AID32501.1 - 0.00085 18.7 1.1 0.071 12.4 0.4 2.2 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Bac_DNA_binding PF00216.21 AID32502.1 - 2.6e-30 104.4 0.0 2.9e-30 104.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 AID32502.1 - 9.2e-07 29.0 0.0 1.1e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_euk_1 PF14908.6 AID32502.1 - 0.0011 19.1 0.0 0.0014 18.8 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 HU-CCDC81_euk_2 PF18289.1 AID32502.1 - 0.034 14.3 0.0 0.057 13.6 0.0 1.3 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_1 PF18174.1 AID32502.1 - 0.066 13.1 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 1 HU-CCDC81_bac_2 PF18175.1 AID32502.1 - 0.15 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 LapA_dom PF06305.11 AID32503.1 - 2.3e-05 24.1 0.5 2.3e-05 24.1 0.5 2.0 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain SUR7 PF06687.12 AID32503.1 - 0.034 13.8 0.6 0.035 13.7 0.6 1.1 1 0 0 1 1 1 0 SUR7/PalI family OPT PF03169.15 AID32503.1 - 0.054 12.1 1.3 0.063 11.9 1.3 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein DUF5480 PF17576.2 AID32503.1 - 0.077 13.0 0.2 0.59 10.1 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5480) ABC2_membrane_3 PF12698.7 AID32503.1 - 1.3 8.1 6.3 1.6 7.7 6.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein OCD_Mu_crystall PF02423.15 AID32504.1 - 2.1e-68 230.6 1.0 2.4e-68 230.4 1.0 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 AID32504.1 - 6.6e-11 42.4 0.0 1.1e-10 41.8 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 AID32504.1 - 0.0098 16.7 0.0 0.017 16.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Sacchrp_dh_NADP PF03435.18 AID32504.1 - 0.048 13.9 0.0 0.086 13.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain EVE PF01878.18 AID32505.1 - 1.4e-22 80.2 0.0 1.6e-22 80.1 0.0 1.0 1 0 0 1 1 1 1 EVE domain Glyoxalase PF00903.25 AID32506.1 - 2.7e-06 27.6 0.0 3.1e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID32506.1 - 0.047 14.5 0.0 0.074 13.8 0.0 1.3 1 1 0 1 1 1 0 Glyoxalase-like domain HTH_11 PF08279.12 AID32507.1 - 6.5e-19 67.6 0.1 1.9e-18 66.1 0.0 1.8 2 0 0 2 2 2 1 HTH domain WYL PF13280.6 AID32507.1 - 5.8e-14 52.5 0.2 9.4e-14 51.8 0.2 1.3 1 0 0 1 1 1 1 WYL domain HTH_IclR PF09339.10 AID32507.1 - 0.0023 17.7 0.2 0.0052 16.6 0.2 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_DeoR PF08220.12 AID32507.1 - 0.0039 16.9 0.4 0.015 15.0 0.0 2.0 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 AID32507.1 - 0.024 14.6 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 AID32507.1 - 0.064 13.3 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_8 PF02954.19 AID32507.1 - 0.11 12.4 0.1 0.34 10.7 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_23 PF13384.6 AID32507.1 - 0.15 11.9 0.8 0.49 10.3 0.0 2.3 3 0 0 3 3 3 0 Homeodomain-like domain Cons_hypoth95 PF03602.15 AID32508.1 - 2.4e-07 30.6 0.0 3.8e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltrans_SAM PF10672.9 AID32508.1 - 3e-07 29.9 0.0 4.1e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_25 PF13649.6 AID32508.1 - 0.0013 19.4 0.0 0.0025 18.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32508.1 - 0.004 17.8 0.0 0.0099 16.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 AID32508.1 - 0.016 14.9 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 MTS PF05175.14 AID32508.1 - 0.032 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_31 PF13847.6 AID32508.1 - 0.1 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 AID32508.1 - 0.12 11.9 0.0 0.26 10.8 0.0 1.4 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase SpoU_methylase PF00588.19 AID32509.1 - 2.8e-32 111.8 0.0 4.1e-32 111.3 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 AID32509.1 - 6.1e-09 36.0 0.0 1.1e-08 35.2 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Peptidase_A8 PF01252.18 AID32510.1 - 1.6e-32 112.6 7.5 1.9e-32 112.4 7.5 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II ADH_zinc_N PF00107.26 AID32511.1 - 3.5e-11 43.2 0.0 1.2e-10 41.5 0.0 1.7 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID32511.1 - 0.0025 18.9 0.0 0.004 18.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase adh_short PF00106.25 AID32511.1 - 0.014 14.9 0.2 0.022 14.2 0.2 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Epimerase PF01370.21 AID32511.1 - 0.036 13.5 0.1 0.057 12.9 0.1 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family KR PF08659.10 AID32511.1 - 0.078 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 KR domain Response_reg PF00072.24 AID32512.1 - 2.6e-29 101.6 0.0 2.3e-25 88.9 0.1 2.5 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 AID32512.1 - 4.2e-29 101.3 0.1 9.4e-29 100.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID32512.1 - 4.1e-20 71.6 0.7 1.5e-19 69.8 0.0 2.4 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 AID32512.1 - 5.9e-09 36.2 0.1 2.2e-08 34.3 0.1 2.1 1 1 0 1 1 1 1 PAS fold PAS PF00989.25 AID32512.1 - 8.8e-06 25.7 0.0 2.1e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID32512.1 - 0.00032 20.9 0.0 0.00076 19.7 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 AID32512.1 - 0.002 18.1 0.1 0.0051 16.8 0.1 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 AID32512.1 - 0.042 13.7 0.0 0.097 12.5 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF898 PF05987.13 AID32512.1 - 0.06 12.4 0.9 0.091 11.8 0.9 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) HATPase_c_2 PF13581.6 AID32512.1 - 0.09 12.7 0.0 0.35 10.8 0.0 2.0 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF2244 PF10003.9 AID32512.1 - 0.14 11.8 0.6 0.33 10.6 0.6 1.5 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Acetyltransf_5 PF13444.6 AID32513.1 - 5e-32 110.6 0.2 7.4e-32 110.1 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Filo_VP35 PF02097.15 AID32513.1 - 0.019 14.0 0.0 0.028 13.5 0.0 1.1 1 0 0 1 1 1 0 Filoviridae VP35 UPF0126 PF03458.13 AID32514.1 - 6.5e-39 131.7 30.3 6.9e-21 73.9 8.4 2.6 3 0 0 3 3 3 2 UPF0126 domain GrpE PF01025.19 AID32515.1 - 8.8e-53 178.4 0.1 1e-52 178.1 0.1 1.1 1 0 0 1 1 1 1 GrpE DUF4200 PF13863.6 AID32515.1 - 0.016 15.6 1.6 0.023 15.1 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) FA_desaturase PF00487.24 AID32517.1 - 3e-32 112.5 22.7 3e-32 112.5 22.7 1.7 1 1 1 2 2 2 2 Fatty acid desaturase Cas_csx3 PF09620.10 AID32517.1 - 0.05 13.5 0.8 12 5.8 0.1 2.4 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_csx3) ABC_membrane PF00664.23 AID32517.1 - 0.49 10.0 3.8 5.2 6.6 1.1 2.7 2 1 1 3 3 3 0 ABC transporter transmembrane region DJ-1_PfpI PF01965.24 AID32518.1 - 4.3e-36 124.2 0.0 5e-36 124.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.13 AID32518.1 - 0.00025 20.9 0.0 0.00034 20.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 AID32518.1 - 0.0036 17.1 0.1 0.0084 15.9 0.0 1.6 1 1 1 2 2 2 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 AID32518.1 - 0.0068 16.0 0.0 0.0089 15.6 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Catalase_C PF18011.1 AID32518.1 - 0.016 14.8 0.0 0.029 14.0 0.0 1.5 1 1 0 1 1 1 0 C-terminal domain found in long catalases GATase_5 PF13507.6 AID32518.1 - 0.026 13.6 0.0 0.043 12.9 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain GMC_oxred_N PF00732.19 AID32519.1 - 2.9e-87 292.8 0.0 3.8e-87 292.4 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_C PF05199.13 AID32519.1 - 4.3e-40 137.6 0.1 7.7e-40 136.7 0.1 1.4 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 AID32519.1 - 1.9e-06 27.7 6.2 5.5e-06 26.2 5.9 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID32519.1 - 1e-05 24.8 3.3 0.025 13.7 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 AID32519.1 - 0.00082 18.5 0.2 0.0013 17.9 0.2 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 AID32519.1 - 0.029 13.6 0.1 7 5.8 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID32519.1 - 0.032 13.5 0.4 0.24 10.6 0.2 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID32519.1 - 0.036 13.3 0.1 0.068 12.4 0.1 1.4 1 0 0 1 1 1 0 Thi4 family NAD_binding_8 PF13450.6 AID32519.1 - 0.038 14.2 0.4 0.12 12.7 0.4 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID32519.1 - 0.11 11.9 0.8 2.5 7.3 0.0 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase DUF934 PF06073.12 AID32520.1 - 9.6e-30 102.6 0.0 1.3e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF934) PAPS_reduct PF01507.19 AID32521.1 - 1.3e-39 136.1 0.0 1.5e-39 135.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NIR_SIR PF01077.22 AID32522.1 - 4.2e-57 192.1 0.0 2.4e-42 144.2 0.0 2.2 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 AID32522.1 - 2.1e-33 114.0 0.0 1.4e-16 60.1 0.0 2.6 2 0 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain DUF2849 PF11011.8 AID32523.1 - 1e-25 90.1 1.8 1.2e-25 90.0 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2849) TP_methylase PF00590.20 AID32524.1 - 1.1e-48 166.0 3.3 1.1e-48 166.0 3.3 1.9 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NAD_binding_7 PF13241.6 AID32524.1 - 5.3e-19 68.6 1.7 1.1e-18 67.6 0.1 2.3 3 0 0 3 3 3 1 Putative NAD(P)-binding CysG_dimeriser PF10414.9 AID32524.1 - 1.7e-16 59.6 2.5 9.4e-16 57.3 0.8 3.1 3 0 0 3 3 3 1 Sirohaem synthase dimerisation region Sirohm_synth_M PF14824.6 AID32524.1 - 4.2e-05 22.9 0.1 8.2e-05 22.0 0.1 1.5 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central Host_attach PF10116.9 AID32526.1 - 7.3e-42 143.2 0.0 8.1e-42 143.1 0.0 1.0 1 0 0 1 1 1 1 Protein required for attachment to host cells baeRF_family12 PF18856.1 AID32526.1 - 5.6e-41 140.4 0.0 6.2e-41 140.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 baeRF_family10 PF18854.1 AID32526.1 - 3.1e-07 30.7 0.1 3.5e-07 30.6 0.1 1.1 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family5 PF18846.1 AID32526.1 - 0.073 13.3 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 Na_H_Exchanger PF00999.21 AID32527.1 - 1.4e-81 274.3 50.8 1.8e-81 273.9 50.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 AID32527.1 - 2.8e-21 75.9 0.7 4.7e-21 75.2 0.7 1.4 1 0 0 1 1 1 1 TrkA-N domain HTH_18 PF12833.7 AID32528.1 - 3.1e-17 62.6 0.1 6.3e-17 61.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32528.1 - 1.3e-07 31.6 0.0 0.0037 17.3 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID32528.1 - 0.00025 21.0 0.0 0.00043 20.2 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_2 PF07883.11 AID32528.1 - 0.024 14.4 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 Cupin domain ADH_zinc_N_2 PF13602.6 AID32529.1 - 4.1e-13 50.5 0.1 1.2e-12 49.1 0.0 1.8 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 AID32529.1 - 1.1e-08 35.1 1.6 2e-08 34.3 0.5 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.10 AID32529.1 - 0.0085 16.2 0.2 0.11 12.6 0.0 2.5 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ELFV_dehydrog PF00208.21 AID32529.1 - 0.071 12.8 0.5 0.21 11.3 0.1 1.9 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Transgly PF00912.22 AID32530.1 - 1.4e-63 213.6 0.0 2.1e-63 213.0 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase adh_short_C2 PF13561.6 AID32530.1 - 7.6e-53 179.5 0.0 1.2e-52 178.8 0.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32530.1 - 8.6e-44 149.3 0.0 1.5e-43 148.6 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Transpeptidase PF00905.22 AID32530.1 - 1.5e-30 106.4 2.3 5.4e-30 104.7 2.1 1.8 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain Epimerase PF01370.21 AID32530.1 - 0.0013 18.2 0.0 0.031 13.8 0.0 2.7 3 0 0 3 3 3 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 AID32530.1 - 0.035 13.5 0.0 0.065 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) NAD_binding_3 PF03447.16 AID32530.1 - 0.071 13.8 0.0 16 6.2 0.0 2.6 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain SurA_N_3 PF13624.6 AID32532.1 - 0.033 14.0 0.1 0.033 14.0 0.1 1.0 1 0 0 1 1 1 0 SurA N-terminal domain DUF4134 PF13572.6 AID32532.1 - 0.065 13.5 0.2 0.065 13.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4134) Transgly_assoc PF04226.13 AID32533.1 - 2.6e-14 53.2 16.9 2.6e-14 53.2 16.9 2.2 2 0 0 2 2 2 1 Transglycosylase associated protein CytB6-F_Fe-S PF08802.10 AID32533.1 - 3.4 7.8 9.6 9.3 6.4 0.4 2.9 2 1 1 3 3 3 0 Cytochrome B6-F complex Fe-S subunit DNA_pol_A_exo1 PF01612.20 AID32535.1 - 2.2e-35 122.0 0.0 2.7e-35 121.7 0.0 1.0 1 0 0 1 1 1 1 3'-5' exonuclease RNase_H_2 PF13482.6 AID32535.1 - 0.0026 17.8 0.0 0.012 15.6 0.0 1.9 1 1 0 1 1 1 1 RNase_H superfamily RNase_T PF00929.24 AID32535.1 - 0.044 14.3 0.0 0.66 10.5 0.0 2.1 1 1 1 2 2 2 0 Exonuclease Peptidase_M20 PF01546.28 AID32536.1 - 2.8e-38 131.7 0.0 3.5e-38 131.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID32536.1 - 1.2e-25 89.5 0.0 2.3e-25 88.6 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain FUR PF01475.19 AID32537.1 - 6e-10 39.3 0.0 8.1e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Ferric uptake regulator family MarR PF01047.22 AID32537.1 - 0.0072 16.2 0.0 0.016 15.2 0.0 1.6 1 0 0 1 1 1 1 MarR family PadR PF03551.14 AID32537.1 - 0.02 14.8 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TackOD1 PF18551.1 AID32537.1 - 0.022 14.4 0.5 0.057 13.1 0.5 1.7 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 TrmB PF01978.19 AID32537.1 - 0.04 13.8 0.0 0.22 11.4 0.0 2.0 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF3368 PF11848.8 AID32537.1 - 0.048 13.4 0.0 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3368) Peptidase_C14 PF00656.22 AID32538.1 - 1.7e-17 64.2 0.0 2.5e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Caspase domain DUF4760 PF15956.5 AID32540.1 - 0.00064 19.9 0.0 0.0009 19.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4760) DUF3243 PF11588.8 AID32540.1 - 0.027 14.8 0.1 0.057 13.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3243) DUF2794 PF10984.8 AID32540.1 - 0.11 12.6 0.1 0.26 11.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2794) WD40 PF00400.32 AID32541.1 - 1.6e-29 101.5 11.6 1.6e-05 25.6 0.3 9.2 9 0 0 9 9 9 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 AID32541.1 - 9.7e-15 54.6 0.0 0.0081 16.4 0.0 5.9 3 2 3 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain Peptidase_C14 PF00656.22 AID32541.1 - 2.6e-10 40.7 0.0 6.8e-09 36.0 0.0 2.2 1 1 0 1 1 1 1 Caspase domain Kelch_6 PF13964.6 AID32541.1 - 1.4e-05 25.1 1.0 5.2 7.5 0.0 4.5 4 0 0 4 4 4 2 Kelch motif Ge1_WD40 PF16529.5 AID32541.1 - 0.00052 19.1 2.4 4.9 6.0 0.0 4.3 4 1 0 5 5 5 2 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 AID32541.1 - 0.0022 17.9 0.9 2 8.5 0.0 3.7 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat Nup160 PF11715.8 AID32541.1 - 0.027 13.2 0.0 3.1 6.3 0.0 2.4 2 0 0 2 2 2 0 Nucleoporin Nup120/160 CBM60 PF16841.5 AID32541.1 - 0.028 14.8 0.2 0.11 13.0 0.2 2.0 1 0 0 1 1 1 0 Ca-dependent carbohydrate-binding module xylan-binding Cadherin-like PF12733.7 AID32541.1 - 1.8 9.1 3.6 3.6 8.2 1.3 2.4 2 0 0 2 2 2 0 Cadherin-like beta sandwich domain DUF5122 PF17164.4 AID32541.1 - 3.5 8.0 6.2 14 6.1 0.2 4.1 3 0 0 3 3 3 0 Domain of unknown function (DUF5122) beta-propeller PGA_cap PF09587.10 AID32542.1 - 1.9e-32 112.7 0.1 3.9e-18 65.8 0.0 2.2 1 1 1 2 2 2 2 Bacterial capsule synthesis protein PGA_cap Memo PF01875.17 AID32542.1 - 1.4e-18 67.0 0.0 2.6e-18 66.2 0.0 1.4 2 0 0 2 2 2 1 Memo-like protein LigB PF02900.18 AID32542.1 - 0.0041 16.2 0.1 0.015 14.3 0.1 1.8 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase MORN PF02493.20 AID32543.1 - 2e-12 46.2 16.3 0.0046 16.8 0.0 6.6 6 0 0 6 6 6 5 MORN repeat Trypsin PF00089.26 AID32544.1 - 4e-08 33.3 0.1 3.5e-07 30.3 0.1 2.1 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 AID32544.1 - 1.4e-07 32.5 0.0 3.2e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 AID32545.1 - 3.1e-46 157.9 1.2 1.3e-45 155.9 1.2 1.8 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 AID32545.1 - 8.7e-07 29.9 1.0 4.5e-06 27.6 1.0 2.0 1 1 0 1 1 1 1 Trypsin-like peptidase domain Aldo_ket_red PF00248.21 AID32546.1 - 5.7e-67 226.0 0.0 6.6e-67 225.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family TFX_C PF14601.6 AID32546.1 - 0.064 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term GFO_IDH_MocA PF01408.22 AID32547.1 - 2.3e-18 67.1 0.1 2.3e-17 64.0 0.0 2.1 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 AID32547.1 - 0.013 16.2 0.0 0.023 15.4 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA_C PF02894.17 AID32547.1 - 0.049 13.6 0.0 0.092 12.8 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain Sacchrp_dh_NADP PF03435.18 AID32547.1 - 0.074 13.3 1.0 0.4 10.9 1.0 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain AP_endonuc_2 PF01261.24 AID32548.1 - 7.9e-17 61.4 0.1 1.2e-16 60.8 0.1 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel ABC_tran PF00005.27 AID32549.1 - 5.8e-31 107.8 0.0 8.4e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID32549.1 - 7.1e-15 55.6 0.0 2.8e-14 53.7 0.0 2.1 2 0 0 2 2 1 1 MalK OB fold domain TOBE_2 PF08402.10 AID32549.1 - 1.2e-08 35.0 0.0 2.4e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID32549.1 - 2e-08 34.4 0.8 0.0013 18.6 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID32549.1 - 7.1e-06 26.5 0.0 1.5e-05 25.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID32549.1 - 1.2e-05 25.3 0.0 2.4e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 AID32549.1 - 4.8e-05 22.9 0.3 0.0011 18.4 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32549.1 - 0.00012 21.8 0.0 0.00031 20.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain CysA_C_terminal PF17850.1 AID32549.1 - 0.00044 20.7 0.1 0.0013 19.3 0.1 1.9 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA_23 PF13476.6 AID32549.1 - 0.0011 19.5 0.2 0.0021 18.6 0.2 1.3 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 AID32549.1 - 0.0037 17.2 0.0 0.006 16.5 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 AID32549.1 - 0.0043 17.0 0.0 0.0064 16.4 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain T2SSE PF00437.20 AID32549.1 - 0.0086 15.2 0.0 0.016 14.2 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 AID32549.1 - 0.01 16.1 0.0 0.02 15.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID32549.1 - 0.011 15.4 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TOBE PF03459.17 AID32549.1 - 0.013 15.8 0.0 0.036 14.4 0.0 1.7 1 0 0 1 1 1 0 TOBE domain AAA PF00004.29 AID32549.1 - 0.032 14.7 0.0 0.066 13.6 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID32549.1 - 0.039 13.3 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 AID32549.1 - 0.048 14.1 0.0 0.092 13.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 AID32549.1 - 0.051 13.6 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 AID32549.1 - 0.056 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_15 PF13175.6 AID32549.1 - 0.059 13.1 0.0 0.097 12.4 0.0 1.3 2 0 0 2 2 1 0 AAA ATPase domain AAA_27 PF13514.6 AID32549.1 - 0.072 12.7 0.4 0.17 11.4 0.0 1.8 3 0 0 3 3 2 0 AAA domain AAA_28 PF13521.6 AID32549.1 - 0.072 13.3 0.6 0.21 11.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID32549.1 - 0.086 12.9 0.1 0.22 11.6 0.1 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID32549.1 - 0.13 12.8 0.0 0.3 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID32549.1 - 0.15 11.8 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein BPD_transp_1 PF00528.22 AID32550.1 - 1.9e-15 57.1 18.9 1.9e-15 57.1 18.9 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2975 PF11188.8 AID32550.1 - 6.5 6.6 9.6 29 4.6 0.0 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF2975) BPD_transp_1 PF00528.22 AID32551.1 - 4.8e-11 42.7 19.1 4.8e-11 42.7 19.1 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_1 PF01547.25 AID32553.1 - 8.3e-23 81.8 13.0 1.1e-22 81.4 13.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32553.1 - 9.7e-21 74.8 8.4 1.4e-20 74.3 8.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Peripla_BP_1 PF00532.21 AID32554.1 - 2.3e-10 40.4 0.0 3e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID32554.1 - 7.3e-09 35.3 0.1 2.8e-08 33.4 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_3 PF13377.6 AID32554.1 - 3.8e-08 33.8 0.0 7.3e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 AID32554.1 - 1.8e-05 24.4 0.0 2.5e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain 6PGD PF00393.19 AID32555.1 - 2.6e-117 391.4 0.0 3.1e-117 391.1 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 AID32555.1 - 2.7e-48 164.1 0.0 4.5e-48 163.4 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 AID32555.1 - 2.2e-06 27.8 0.1 9.9e-06 25.7 0.1 2.0 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 AID32555.1 - 1.7e-05 25.3 0.2 0.0001 22.8 0.2 2.5 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 AID32555.1 - 0.00032 20.4 0.0 0.00061 19.5 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 AID32555.1 - 0.00075 19.4 0.1 0.0015 18.4 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID32555.1 - 0.0019 18.2 0.0 0.011 15.7 0.0 2.0 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 AID32555.1 - 0.013 14.8 0.2 0.05 13.0 0.0 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 AID32555.1 - 0.017 15.4 0.1 0.058 13.6 0.1 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CopC PF04234.12 AID32556.1 - 2.2e-20 73.5 0.0 1.7e-19 70.7 0.0 2.1 2 0 0 2 2 2 1 CopC domain CopD PF05425.13 AID32556.1 - 1.9e-19 70.0 16.4 1.9e-19 70.0 16.4 3.2 3 1 0 3 3 3 1 Copper resistance protein D Big_5 PF13205.6 AID32556.1 - 0.0012 19.5 0.2 0.0025 18.5 0.2 1.4 1 0 0 1 1 1 1 Bacterial Ig-like domain FixH PF05751.11 AID32556.1 - 0.32 11.0 0.0 0.32 11.0 0.0 2.4 3 0 0 3 3 3 0 FixH DUF1775 PF07987.11 AID32557.1 - 2.5e-52 177.1 0.0 2.8e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unkown function (DUF1775) Gag_p30 PF02093.16 AID32557.1 - 0.13 11.8 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Gag P30 core shell protein PCuAC PF04314.13 AID32558.1 - 1.3e-40 137.6 0.0 1.9e-40 137.1 0.0 1.2 1 0 0 1 1 1 1 Copper chaperone PCu(A)C DUF2946 PF11162.8 AID32559.1 - 0.00039 21.1 9.7 0.00045 20.9 9.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2946) FCD PF07729.12 AID32560.1 - 2.1e-16 60.5 8.8 4e-16 59.6 8.8 1.5 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID32560.1 - 2.7e-13 49.3 4.2 8.1e-06 25.4 0.3 3.0 3 0 0 3 3 3 2 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID32560.1 - 1.1e-08 34.9 1.5 0.00015 21.7 0.1 2.5 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 AID32560.1 - 6.6e-06 26.2 0.0 0.045 13.9 0.0 2.3 2 0 0 2 2 2 2 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 AID32560.1 - 1.4e-05 24.9 1.2 0.011 15.6 0.1 3.3 3 2 0 3 3 3 1 MarR family HTH_IclR PF09339.10 AID32560.1 - 1.7e-05 24.5 0.6 0.035 13.9 0.2 3.1 2 0 0 2 2 2 2 IclR helix-turn-helix domain MarR PF01047.22 AID32560.1 - 2.3e-05 24.2 0.7 0.0019 18.1 0.1 2.9 3 0 0 3 3 2 1 MarR family HTH_29 PF13551.6 AID32560.1 - 5.4e-05 23.1 0.1 0.0085 16.1 0.0 2.6 2 0 0 2 2 2 1 Winged helix-turn helix TrmB PF01978.19 AID32560.1 - 7.2e-05 22.6 0.0 0.13 12.1 0.0 2.5 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB PaaX PF07848.12 AID32560.1 - 0.00031 20.9 2.4 0.28 11.4 0.1 2.4 2 0 0 2 2 2 2 PaaX-like protein TFIIE_alpha PF02002.17 AID32560.1 - 0.00033 20.5 0.0 0.08 12.8 0.0 2.5 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_24 PF13412.6 AID32560.1 - 0.00039 19.9 0.2 0.0063 16.0 0.1 2.9 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID32560.1 - 0.0011 18.9 0.5 0.019 14.9 0.0 3.1 3 0 0 3 3 3 1 HTH domain HTH_23 PF13384.6 AID32560.1 - 0.0018 18.0 0.2 0.0094 15.7 0.0 2.3 3 0 0 3 3 2 1 Homeodomain-like domain HTH_28 PF13518.6 AID32560.1 - 0.0037 17.3 0.1 0.05 13.7 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain SgrR_N PF12793.7 AID32560.1 - 0.018 15.3 0.0 0.068 13.4 0.0 2.0 2 0 0 2 2 2 0 Sugar transport-related sRNA regulator N-term CENP-B_N PF04218.13 AID32560.1 - 0.028 14.1 0.0 9 6.0 0.0 2.7 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Sigma70_r4 PF04545.16 AID32560.1 - 0.031 13.8 1.5 0.1 12.1 0.0 2.7 2 0 0 2 2 1 0 Sigma-70, region 4 HTH_AsnC-type PF13404.6 AID32560.1 - 0.042 13.7 1.4 1.1 9.1 0.1 2.7 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 AID32560.1 - 0.056 13.2 0.0 12 5.7 0.0 3.3 3 0 0 3 3 3 0 HTH DNA binding domain HTH_36 PF13730.6 AID32560.1 - 0.074 13.0 0.0 0.2 11.6 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_12 PF08461.10 AID32560.1 - 0.2 11.6 1.3 12 6.0 0.0 3.4 3 1 0 3 3 3 0 Ribonuclease R winged-helix domain Phage_P2_GpE PF06528.12 AID32560.1 - 0.34 10.5 2.3 22 4.7 0.1 3.2 3 0 0 3 3 3 0 Phage P2 GpE GD_AH_C PF04295.13 AID32561.1 - 2.9e-153 510.3 0.9 3.5e-153 510.1 0.9 1.1 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus SAF PF08666.12 AID32561.1 - 4.1e-13 49.7 2.3 9.1e-13 48.6 2.3 1.6 1 0 0 1 1 1 1 SAF domain Dehydratase_LU PF02286.15 AID32561.1 - 0.16 10.5 0.2 0.27 9.8 0.2 1.2 1 0 0 1 1 1 0 Dehydratase large subunit Aldo_ket_red PF00248.21 AID32562.1 - 4e-42 144.4 0.0 4.8e-42 144.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Peripla_BP_4 PF13407.6 AID32563.1 - 1.7e-53 181.8 12.5 2.2e-53 181.5 12.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID32563.1 - 4.2e-08 33.0 0.3 7.1e-08 32.2 0.3 1.3 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID32563.1 - 1.1e-06 29.1 0.3 3.1e-05 24.3 0.0 2.8 1 1 2 3 3 3 1 Periplasmic binding protein-like domain Asp_protease_2 PF13650.6 AID32563.1 - 0.005 17.5 0.2 0.72 10.5 0.1 2.6 2 0 0 2 2 2 1 Aspartyl protease ABC_tran PF00005.27 AID32564.1 - 1e-46 158.9 0.0 9.3e-26 91.0 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID32564.1 - 7.7e-10 39.1 0.0 0.0025 17.7 0.0 3.1 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32564.1 - 1.3e-06 28.0 0.3 1.2e-05 24.8 0.2 2.4 2 2 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID32564.1 - 7.5e-06 26.0 0.1 0.0063 16.4 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 AID32564.1 - 0.00016 21.3 0.6 0.0016 18.1 0.1 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID32564.1 - 0.00022 20.2 0.2 0.5 9.1 0.2 2.9 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_23 PF13476.6 AID32564.1 - 0.00026 21.6 0.1 0.00055 20.5 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID32564.1 - 0.00088 19.0 0.2 0.012 15.3 0.1 2.6 2 1 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 AID32564.1 - 0.002 18.2 0.2 0.053 13.6 0.0 2.8 3 0 0 3 3 3 1 50S ribosome-binding GTPase AAA_22 PF13401.6 AID32564.1 - 0.0038 17.5 1.5 0.35 11.1 0.1 2.7 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 AID32564.1 - 0.0066 16.8 0.1 1.9 8.8 0.0 2.6 2 0 0 2 2 2 1 AAA ATPase domain Ad_Cy_reg PF16701.5 AID32564.1 - 0.025 14.3 0.2 0.05 13.3 0.2 1.5 1 0 0 1 1 1 0 Adenylate cyclase regulatory domain AAA_15 PF13175.6 AID32564.1 - 0.027 14.2 0.0 0.079 12.7 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_27 PF13514.6 AID32564.1 - 0.042 13.5 0.0 0.1 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID32564.1 - 0.068 12.9 0.2 4.1 7.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain PucR PF07905.11 AID32564.1 - 0.15 12.4 0.1 19 5.6 0.0 2.7 2 1 0 2 2 2 0 Purine catabolism regulatory protein-like family TsaE PF02367.17 AID32564.1 - 0.16 12.0 0.7 18 5.3 0.1 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE BPD_transp_2 PF02653.16 AID32565.1 - 3.7e-51 173.9 37.6 3.7e-51 173.9 37.6 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ADH_N PF08240.12 AID32566.1 - 4.5e-32 110.2 2.4 8.6e-32 109.3 2.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID32566.1 - 1.8e-15 57.1 0.1 3.4e-15 56.2 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID32566.1 - 3.5e-13 49.5 0.3 4.5e-13 49.2 0.3 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 AID32566.1 - 5.9e-05 24.1 0.1 0.00012 23.1 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Pyr_redox_2 PF07992.14 AID32566.1 - 0.0023 17.2 0.0 0.0036 16.6 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID32566.1 - 0.0087 16.6 0.1 0.028 15.0 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 AID32566.1 - 0.02 14.8 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 AID32566.1 - 0.026 13.8 0.2 0.04 13.2 0.2 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 AID32566.1 - 0.031 13.5 0.1 0.045 13.0 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF3666 PF12408.8 AID32566.1 - 0.064 12.5 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase NADH_4Fe-4S PF10589.9 AID32566.1 - 0.19 11.8 2.4 0.36 10.9 2.4 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region UTRA PF07702.13 AID32567.1 - 1.9e-14 53.7 0.0 2.1e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 UTRA domain PhnG PF06754.12 AID32569.1 - 9.1e-51 171.6 1.0 1e-50 171.4 1.0 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG PhnH PF05845.12 AID32570.1 - 3.1e-68 229.2 0.7 3.5e-68 229.1 0.7 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnH) PhnI PF05861.12 AID32571.1 - 1.6e-158 527.2 0.0 1.8e-158 527.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnI) PhnG PF06754.12 AID32571.1 - 0.00011 22.2 0.0 0.0004 20.4 0.0 1.9 2 0 0 2 2 2 1 Phosphonate metabolism protein PhnG Glyoxalase PF00903.25 AID32572.1 - 2.1e-08 34.4 0.1 3e-08 33.9 0.1 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32572.1 - 0.012 15.9 0.0 0.12 12.6 0.0 2.0 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhnJ PF06007.11 AID32573.1 - 1.6e-146 486.5 0.1 1.9e-146 486.3 0.1 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnJ PhnA_Zn_Ribbon PF08274.12 AID32573.1 - 0.0056 16.6 1.4 0.011 15.7 1.4 1.4 1 0 0 1 1 1 1 PhnA Zinc-Ribbon ABC_tran PF00005.27 AID32574.1 - 5e-10 40.0 0.0 7.2e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 AID32574.1 - 0.00035 21.0 0.0 0.00064 20.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID32574.1 - 0.0012 18.7 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 AID32574.1 - 0.0077 16.4 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_tran PF00005.27 AID32575.1 - 1.4e-27 96.9 0.0 1.7e-27 96.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID32575.1 - 2.4e-05 23.9 0.1 0.00093 18.7 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID32575.1 - 4.4e-05 23.4 0.0 0.085 12.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID32575.1 - 0.00031 20.7 0.0 0.00053 19.9 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID32575.1 - 0.0012 19.3 0.1 0.0018 18.7 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID32575.1 - 0.009 15.7 0.1 0.018 14.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 AID32575.1 - 0.042 13.6 0.2 0.15 11.7 0.0 2.0 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.6 AID32575.1 - 0.07 13.4 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID32575.1 - 0.13 11.5 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_23 PF13476.6 AID32575.1 - 0.14 12.6 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID32575.1 - 0.34 10.6 0.1 1.1 8.9 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain Hexapep PF00132.24 AID32576.1 - 9.5e-12 44.2 0.6 3.1e-08 33.0 1.1 3.3 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID32576.1 - 6.8e-07 28.9 0.2 1.5e-06 27.8 0.2 1.6 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase 2H-phosphodiest PF08975.10 AID32577.1 - 7.2e-41 138.8 0.0 1.1e-40 138.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1868) 2_5_RNA_ligase2 PF13563.6 AID32577.1 - 0.026 14.4 0.1 0.044 13.7 0.1 1.5 1 1 0 1 1 1 0 2'-5' RNA ligase superfamily ABC_tran PF00005.27 AID32578.1 - 3.1e-35 121.7 0.0 5e-35 121.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 AID32578.1 - 0.00027 21.4 0.0 0.00046 20.6 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID32578.1 - 0.0003 20.5 0.0 0.00072 19.2 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 AID32578.1 - 0.00037 20.4 0.0 0.039 13.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID32578.1 - 0.0013 19.0 0.0 0.0025 18.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID32578.1 - 0.0052 16.7 0.1 0.01 15.7 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 AID32578.1 - 0.0065 16.5 0.0 0.033 14.3 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase Adeno_IVa2 PF02456.15 AID32578.1 - 0.016 14.1 0.0 0.022 13.6 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein ATP-synt_ab PF00006.25 AID32578.1 - 0.051 13.2 0.2 0.058 13.1 0.2 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_30 PF13604.6 AID32578.1 - 0.051 13.3 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 AID32578.1 - 0.052 12.7 0.0 0.083 12.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain SMC_N PF02463.19 AID32578.1 - 0.071 12.5 0.2 6.3 6.2 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID32578.1 - 0.13 12.0 0.0 0.46 10.1 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.17 AID32578.1 - 0.16 12.0 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Phosphonate-bd PF12974.7 AID32579.1 - 2e-57 194.6 0.0 2.3e-57 194.4 0.0 1.0 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 AID32579.1 - 0.0044 16.5 0.0 0.016 14.6 0.0 1.8 2 1 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 AID32579.1 - 0.11 12.5 0.1 0.25 11.3 0.1 1.8 1 1 0 1 1 1 0 NMT1/THI5 like BPD_transp_1 PF00528.22 AID32580.1 - 1.6e-12 47.5 7.3 1.6e-12 47.5 7.3 1.9 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component MotA_ExbB PF01618.16 AID32580.1 - 0.17 11.7 0.3 0.17 11.7 0.3 2.0 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family BPD_transp_1 PF00528.22 AID32581.1 - 8.5e-14 51.7 4.6 8.5e-14 51.7 4.6 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3169 PF11368.8 AID32581.1 - 0.13 11.7 2.8 0.27 10.7 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) AP_endonuc_2 PF01261.24 AID32582.1 - 3.9e-29 101.6 0.0 5.5e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID32582.1 - 0.013 15.2 0.0 0.036 13.8 0.0 1.8 1 0 0 1 1 1 0 AP endonuclease family 2 C terminus GFO_IDH_MocA PF01408.22 AID32583.1 - 2.3e-25 89.8 0.4 2.3e-25 89.8 0.4 1.6 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID32583.1 - 8.3e-08 32.3 0.0 2e-07 31.0 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain DND1_DSRM PF14709.7 AID32583.1 - 0.034 14.4 1.4 11 6.4 0.1 3.5 3 1 1 4 4 4 0 double strand RNA binding domain from DEAD END PROTEIN 1 Dak1_2 PF13684.6 AID32583.1 - 0.095 11.8 0.1 0.14 11.2 0.1 1.2 1 0 0 1 1 1 0 Dihydroxyacetone kinase family AP_endonuc_2 PF01261.24 AID32584.1 - 1.4e-38 132.5 0.0 1.7e-38 132.2 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID32584.1 - 6.8e-22 76.9 0.1 1.4e-21 75.9 0.1 1.6 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus AP_endonuc_2 PF01261.24 AID32585.1 - 3.8e-36 124.5 0.1 4.9e-36 124.1 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID32585.1 - 0.043 13.5 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 AP endonuclease family 2 C terminus Tho1_MOS11_C PF18592.1 AID32585.1 - 0.11 12.3 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain MR_MLE_C PF13378.6 AID32587.1 - 7.8e-64 215.3 0.5 1e-63 214.8 0.5 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID32587.1 - 2.7e-20 72.7 0.8 1.3e-19 70.5 0.8 2.1 1 1 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FCD PF07729.12 AID32588.1 - 1.9e-24 86.5 3.9 1.9e-24 86.5 3.9 2.1 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID32588.1 - 3.4e-11 42.6 0.1 8.3e-11 41.4 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Sigma70_r3 PF04539.16 AID32588.1 - 0.00059 19.9 0.6 0.0038 17.3 0.1 2.2 2 0 0 2 2 2 1 Sigma-70 region 3 FaeA PF04703.12 AID32588.1 - 0.0024 18.2 0.1 0.015 15.6 0.0 2.1 2 0 0 2 2 2 1 FaeA-like protein HTH_41 PF14502.6 AID32588.1 - 0.0027 17.4 0.0 0.0044 16.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 AID32588.1 - 0.0028 17.6 0.0 0.0061 16.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 AID32588.1 - 0.0035 17.2 0.8 0.022 14.7 0.1 2.5 3 0 0 3 3 3 1 HTH domain DUF4423 PF14394.6 AID32588.1 - 0.016 15.0 0.3 0.088 12.5 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) HTH_5 PF01022.20 AID32588.1 - 0.024 14.5 0.0 0.066 13.1 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 AID32588.1 - 0.042 13.8 0.1 0.1 12.6 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF1366 PF07104.11 AID32588.1 - 0.05 13.3 0.1 0.078 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) HrcA_DNA-bdg PF03444.15 AID32588.1 - 0.061 13.0 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BcrAD_BadFG PF01869.20 AID32588.1 - 0.11 12.0 0.1 0.13 11.7 0.1 1.3 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family TrmB PF01978.19 AID32588.1 - 0.15 11.9 0.2 1.5 8.8 0.0 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB FeoC PF09012.10 AID32588.1 - 0.16 12.1 0.1 0.55 10.4 0.0 2.0 2 0 0 2 2 2 0 FeoC like transcriptional regulator 2-Hacid_dh_C PF02826.19 AID32589.1 - 2.9e-59 199.4 0.0 9.2e-59 197.8 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID32589.1 - 3.3e-23 81.8 0.0 3.9e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 AID32589.1 - 5e-06 26.8 0.0 9.2e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 AID32589.1 - 0.00083 19.5 0.0 0.0019 18.3 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F420_oxidored PF03807.17 AID32589.1 - 0.018 15.6 3.7 0.04 14.5 0.3 2.9 2 2 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 AID32589.1 - 0.055 13.0 0.4 0.19 11.3 0.0 2.1 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sacchrp_dh_NADP PF03435.18 AID32589.1 - 0.18 12.1 0.4 1.1 9.6 0.1 2.4 3 0 0 3 3 3 0 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 AID32589.1 - 0.48 9.7 3.0 0.82 8.9 0.3 2.5 3 1 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Amidase PF01425.21 AID32591.1 - 4.6e-83 279.7 2.3 6.6e-83 279.2 2.3 1.2 1 0 0 1 1 1 1 Amidase GFA PF04828.14 AID32592.1 - 3.4e-06 27.3 0.4 3.4e-06 27.3 0.4 1.5 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme Ribosomal_L37e PF01907.19 AID32592.1 - 0.16 12.2 0.2 0.16 12.2 0.2 2.4 2 1 0 2 2 2 0 Ribosomal protein L37e adh_short PF00106.25 AID32593.1 - 3.6e-20 72.2 0.1 8.8e-20 71.0 0.1 1.5 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32593.1 - 5.3e-18 65.4 0.1 1e-17 64.5 0.1 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32593.1 - 0.016 15.2 0.9 0.031 14.2 0.9 1.4 1 0 0 1 1 1 0 KR domain Glyco_hydro_31 PF01055.26 AID32593.1 - 0.087 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 31 Epimerase PF01370.21 AID32593.1 - 0.21 11.0 0.8 0.87 9.0 0.8 1.9 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 AID32593.1 - 0.31 11.1 2.9 0.59 10.2 2.9 1.6 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TetR_N PF00440.23 AID32594.1 - 2e-11 43.5 0.0 3.9e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family MFS_1 PF07690.16 AID32595.1 - 3e-40 138.2 89.1 4.1e-31 108.2 54.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily GST_C_2 PF13410.6 AID32595.1 - 0.13 12.3 0.4 0.37 10.9 0.4 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain MFS_4 PF06779.14 AID32595.1 - 2.7 7.2 49.8 3.2 6.9 49.8 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Cupin_6 PF12852.7 AID32596.1 - 2e-47 161.3 0.0 2.9e-47 160.8 0.0 1.3 1 0 0 1 1 1 1 Cupin HTH_18 PF12833.7 AID32596.1 - 8.5e-20 70.8 0.9 1.5e-19 70.0 0.9 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32596.1 - 4.3e-11 42.6 0.0 0.00028 20.9 0.0 3.1 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 AID32596.1 - 0.033 14.1 0.0 0.095 12.6 0.0 1.7 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_2 PF07883.11 AID32596.1 - 0.044 13.5 0.0 0.092 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain UBA_5 PF16577.5 AID32596.1 - 0.12 12.5 0.4 13 6.0 0.0 2.9 2 1 1 3 3 3 0 UBA domain Cupin_6 PF12852.7 AID32597.1 - 9.1e-45 152.6 0.8 9.1e-45 152.6 0.8 1.6 2 0 0 2 2 2 1 Cupin HTH_18 PF12833.7 AID32597.1 - 4.3e-20 71.8 2.4 8.7e-20 70.8 2.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID32597.1 - 1.1e-14 54.0 0.0 2.5e-06 27.4 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family MarR_2 PF12802.7 AID32597.1 - 0.00013 21.8 0.8 0.019 14.8 0.1 2.6 2 0 0 2 2 2 2 MarR family DUF1206 PF06724.11 AID32597.1 - 0.09 12.9 0.2 0.31 11.2 0.1 2.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) DUF4437 PF14499.6 AID32598.1 - 3.2e-13 49.4 0.0 4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4437) Cupin_2 PF07883.11 AID32598.1 - 0.0025 17.5 0.0 0.0036 17.0 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_7 PF12973.7 AID32598.1 - 0.036 14.0 0.0 0.086 12.8 0.0 1.6 1 1 0 1 1 1 0 ChrR Cupin-like domain OB_MalK PF17912.1 AID32599.1 - 2.3e-12 47.6 0.2 6.5e-12 46.1 0.2 1.8 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 AID32599.1 - 2e-10 40.7 0.4 7.5e-10 38.9 0.3 2.0 2 0 0 2 2 2 1 TOBE domain ABC_tran PF00005.27 AID32599.1 - 1.7e-09 38.3 0.0 3e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter CysA_C_terminal PF17850.1 AID32599.1 - 3.4e-07 30.7 0.1 2.3e-06 28.1 0.0 2.4 2 0 0 2 2 2 1 CysA C-terminal regulatory domain TOBE PF03459.17 AID32599.1 - 0.00021 21.5 0.5 0.0005 20.3 0.5 1.6 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID32599.1 - 0.00052 19.9 0.0 0.00084 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Epiglycanin_C PF14654.6 AID32600.1 - 0.18 11.9 0.2 0.18 11.9 0.2 2.1 2 1 0 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region DUF2070 PF09843.9 AID32600.1 - 0.6 8.3 8.8 0.75 8.0 8.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PRA1 PF03208.19 AID32600.1 - 9.1 5.9 13.2 24 4.6 11.9 1.9 1 1 1 2 2 2 0 PRA1 family protein ABC_tran PF00005.27 AID32601.1 - 4.7e-28 98.4 0.0 7.2e-28 97.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32601.1 - 2.5e-06 27.5 0.0 0.065 13.0 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 AID32601.1 - 1.5e-05 25.8 0.0 4.9e-05 24.1 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 AID32601.1 - 4.8e-05 23.4 0.3 0.00012 22.2 0.3 1.8 1 0 0 1 1 1 1 TOBE domain AAA_16 PF13191.6 AID32601.1 - 0.00018 21.9 0.2 0.00059 20.3 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain TOBE PF03459.17 AID32601.1 - 0.00023 21.4 0.4 0.00065 19.9 0.1 2.0 2 0 0 2 2 1 1 TOBE domain AAA PF00004.29 AID32601.1 - 0.0011 19.4 0.2 0.021 15.2 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 AID32601.1 - 0.0035 17.1 0.0 0.027 14.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 AID32601.1 - 0.0048 16.8 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 AID32601.1 - 0.0054 17.0 0.5 0.13 12.5 0.1 2.5 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AID32601.1 - 0.02 14.8 0.0 0.066 13.1 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 AID32601.1 - 0.021 15.3 0.0 0.038 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AID32601.1 - 0.033 13.8 0.0 0.039 13.6 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_5 PF07728.14 AID32601.1 - 0.049 13.6 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 AID32601.1 - 0.057 13.3 0.3 0.16 11.8 0.1 1.8 2 0 0 2 2 2 0 NACHT domain DUF5122 PF17164.4 AID32601.1 - 0.071 13.4 0.1 8.2 6.8 0.0 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF5122) beta-propeller AAA_33 PF13671.6 AID32601.1 - 0.077 13.2 0.0 0.19 11.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 AID32601.1 - 0.092 13.1 0.2 0.22 11.8 0.2 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID32601.1 - 0.17 12.2 1.0 0.4 11.0 1.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID32601.1 - 0.18 11.6 0.0 0.44 10.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 AID32601.1 - 0.18 11.7 0.0 0.97 9.3 0.0 1.9 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea G-alpha PF00503.20 AID32601.1 - 0.27 10.4 0.0 0.33 10.1 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit BPD_transp_1 PF00528.22 AID32602.1 - 5.1e-19 68.7 17.2 5.1e-19 68.7 17.2 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32603.1 - 1.2e-14 54.5 20.0 1.2e-14 54.5 20.0 2.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 AID32604.1 - 2.2e-16 60.5 3.2 2.2e-16 60.5 3.2 1.5 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32604.1 - 1.8e-10 41.3 8.9 4.7e-10 39.9 8.9 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 AID32605.1 - 6.9e-30 104.3 0.0 1.3e-29 103.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32605.1 - 3.1e-08 33.6 0.1 7e-08 32.5 0.1 1.6 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID32605.1 - 1.4e-06 29.0 0.0 8.1e-06 26.6 0.0 2.4 2 0 0 2 2 2 1 MalK OB fold domain AAA_21 PF13304.6 AID32605.1 - 6.3e-05 22.9 0.9 0.12 12.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID32605.1 - 0.015 15.6 0.3 0.071 13.4 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID32605.1 - 0.016 15.6 0.1 0.037 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain CysA_C_terminal PF17850.1 AID32605.1 - 0.022 15.3 0.2 0.2 12.3 0.0 2.7 2 0 0 2 2 2 0 CysA C-terminal regulatory domain AAA_27 PF13514.6 AID32605.1 - 0.045 13.3 0.0 0.09 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID32605.1 - 0.057 13.1 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID32605.1 - 0.084 12.8 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 AID32605.1 - 0.11 12.9 0.1 0.26 11.7 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID32605.1 - 0.16 11.4 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 AID32605.1 - 0.17 12.1 1.1 0.48 10.6 0.2 2.0 2 1 0 2 2 2 0 AAA domain TetR_N PF00440.23 AID32606.1 - 1.2e-08 34.6 0.1 2.4e-08 33.6 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 AID32606.1 - 0.0005 20.1 0.0 0.00099 19.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_22 PF13309.6 AID32606.1 - 0.0088 16.1 0.2 0.019 15.0 0.2 1.5 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 AID32606.1 - 0.014 15.1 0.1 0.039 13.7 0.1 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_17 PF12728.7 AID32606.1 - 0.18 12.0 0.3 0.7 10.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain UPF0261 PF06792.11 AID32607.1 - 2.6e-155 517.3 0.0 3e-155 517.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0261) FYRC PF05965.14 AID32607.1 - 0.23 11.7 0.0 1.3 9.3 0.0 2.0 2 0 0 2 2 2 0 F/Y rich C-terminus PEP_hydrolase PF09370.10 AID32608.1 - 1.6e-126 421.0 0.4 1.8e-126 420.8 0.4 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate hydrolase-like NMO PF03060.15 AID32608.1 - 0.00011 21.7 0.3 0.00017 21.1 0.3 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase FIST PF08495.10 AID32608.1 - 0.039 14.0 0.1 2.4 8.2 0.0 2.3 2 0 0 2 2 2 0 FIST N domain Cupin_2 PF07883.11 AID32609.1 - 2.6e-16 59.1 1.0 3.7e-16 58.6 1.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 AID32609.1 - 1.7e-07 30.9 0.0 2.4e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Cupin CENP-C_C PF11699.8 AID32609.1 - 0.0017 18.5 0.0 0.0026 17.9 0.0 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like GPI PF06560.11 AID32609.1 - 0.036 13.3 0.1 0.045 13.0 0.1 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Cupin_7 PF12973.7 AID32609.1 - 0.043 13.7 0.5 0.11 12.5 0.2 1.7 1 1 1 2 2 2 0 ChrR Cupin-like domain AraC_binding PF02311.19 AID32609.1 - 0.043 13.7 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 AID32609.1 - 0.083 12.6 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) FdtA PF05523.11 AID32609.1 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 WxcM-like, C-terminal Peptidase_M24 PF00557.24 AID32610.1 - 6.6e-32 110.9 0.1 1.1e-31 110.1 0.1 1.4 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID32610.1 - 3.1e-13 50.5 0.0 2.1e-12 47.9 0.0 2.3 2 1 0 2 2 2 1 Creatinase/Prolidase N-terminal domain SBP_bac_5 PF00496.22 AID32611.1 - 1.1e-84 284.6 4.3 1.4e-84 284.3 4.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 AID32612.1 - 1.1e-38 132.9 12.7 1.1e-38 132.9 12.7 2.1 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32613.1 - 1.7e-23 83.3 15.1 1.7e-23 83.3 15.1 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID32613.1 - 2.8e-06 27.2 2.4 2.8e-06 27.2 2.4 3.2 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 AID32614.1 - 6.1e-28 98.0 0.0 8.7e-28 97.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 AID32614.1 - 3.3e-06 27.4 0.0 1.3e-05 25.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID32614.1 - 2.3e-05 23.9 0.7 0.031 13.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32614.1 - 0.00018 21.2 0.5 0.00054 19.6 0.2 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 AID32614.1 - 0.00037 20.4 1.1 0.13 12.0 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 AID32614.1 - 0.0078 15.8 0.9 0.048 13.2 0.0 2.2 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 AID32614.1 - 0.01 15.6 0.1 0.027 14.2 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 AID32614.1 - 0.014 15.8 1.4 0.028 14.8 1.4 1.8 1 1 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 AID32614.1 - 0.015 15.4 0.1 0.029 14.5 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain Mg_chelatase PF01078.21 AID32614.1 - 0.019 14.4 0.3 0.019 14.4 0.3 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.9 AID32614.1 - 0.028 13.2 0.8 0.18 10.6 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class NACHT PF05729.12 AID32614.1 - 0.04 13.8 0.2 0.09 12.7 0.1 1.6 2 0 0 2 2 2 0 NACHT domain ATP-synt_ab PF00006.25 AID32614.1 - 0.045 13.4 0.3 1.3 8.6 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 AID32614.1 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID32614.1 - 0.062 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase oligo_HPY PF08352.12 AID32614.1 - 0.064 13.8 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region TniB PF05621.11 AID32614.1 - 0.085 12.3 0.0 5.3 6.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_5 PF07728.14 AID32614.1 - 0.12 12.4 0.1 0.26 11.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TIP49 PF06068.13 AID32614.1 - 0.15 11.2 0.3 0.22 10.7 0.3 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_23 PF13476.6 AID32614.1 - 0.15 12.5 0.1 0.21 12.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 AID32615.1 - 3.2e-31 108.7 0.0 4.2e-31 108.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 AID32615.1 - 4.8e-07 30.3 3.2 1.1e-06 29.1 3.4 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID32615.1 - 7.8e-07 28.8 0.0 1.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID32615.1 - 1.8e-05 25.1 0.1 0.00038 20.7 0.2 2.4 2 1 0 2 2 1 1 AAA domain AAA_21 PF13304.6 AID32615.1 - 0.0001 22.2 1.5 0.042 13.7 0.2 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 AID32615.1 - 0.00022 21.7 0.0 0.0055 17.1 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID32615.1 - 0.00025 20.7 0.0 0.00048 19.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 AID32615.1 - 0.00057 19.5 2.0 0.12 11.9 0.0 2.6 3 0 0 3 3 3 2 AAA domain AAA_30 PF13604.6 AID32615.1 - 0.0021 17.8 0.1 0.0079 15.9 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 AID32615.1 - 0.016 15.2 0.1 0.1 12.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SbcCD_C PF13558.6 AID32615.1 - 0.021 15.0 0.1 0.11 12.8 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Cytidylate_kin PF02224.18 AID32615.1 - 0.022 14.5 0.0 0.046 13.5 0.0 1.5 1 0 0 1 1 1 0 Cytidylate kinase Zeta_toxin PF06414.12 AID32615.1 - 0.027 13.7 0.0 0.054 12.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin RsgA_GTPase PF03193.16 AID32615.1 - 0.027 14.4 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase Mg_chelatase PF01078.21 AID32615.1 - 0.029 13.7 0.0 0.1 11.9 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 AID32615.1 - 0.04 14.5 0.0 0.09 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 AID32615.1 - 0.043 13.5 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 AID32615.1 - 0.051 12.7 0.0 0.25 10.5 0.0 2.0 1 1 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 AID32615.1 - 0.063 13.4 0.3 0.21 11.8 0.3 2.1 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID32615.1 - 0.1 12.5 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 AID32615.1 - 0.24 11.1 0.0 0.38 10.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATC_hydrolase PF14196.6 AID32616.1 - 0.00023 22.0 0.1 0.00025 21.9 0.1 1.0 1 0 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase ABC_tran PF00005.27 AID32617.1 - 6.1e-32 111.0 0.0 8.8e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32617.1 - 3.8e-09 36.8 0.1 6.1e-05 23.0 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32617.1 - 2.5e-05 23.9 0.0 0.0045 16.4 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32617.1 - 4.2e-05 23.2 0.0 7.8e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID32617.1 - 4.4e-05 22.5 0.6 0.36 9.6 0.1 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class DUF2190 PF09956.9 AID32617.1 - 0.00039 20.9 0.3 1.4 9.5 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2190) AAA_30 PF13604.6 AID32617.1 - 0.00041 20.1 1.1 0.0027 17.5 1.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID32617.1 - 0.00044 20.8 0.0 0.0007 20.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID32617.1 - 0.00091 18.6 0.1 0.018 14.4 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin TsaE PF02367.17 AID32617.1 - 0.0011 19.0 0.0 0.0019 18.2 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 AID32617.1 - 0.0082 16.5 0.0 0.015 15.7 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_15 PF13175.6 AID32617.1 - 0.012 15.3 0.0 0.043 13.5 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 AID32617.1 - 0.019 14.9 0.0 0.032 14.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase MukB PF04310.12 AID32617.1 - 0.043 13.6 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_24 PF13479.6 AID32617.1 - 0.052 13.3 0.3 0.8 9.4 0.1 2.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID32617.1 - 0.058 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 AID32617.1 - 0.059 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID32617.1 - 0.11 12.4 0.2 0.42 10.5 0.1 1.9 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 AID32617.1 - 0.12 12.5 0.0 0.26 11.4 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase DLIC PF05783.11 AID32617.1 - 0.12 11.2 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_18 PF13238.6 AID32617.1 - 0.15 12.6 0.1 0.5 10.9 0.1 1.9 1 1 0 2 2 2 0 AAA domain FeoB_N PF02421.18 AID32617.1 - 0.16 11.5 0.1 0.43 10.1 0.1 1.7 2 0 0 2 2 2 0 Ferrous iron transport protein B BPD_transp_2 PF02653.16 AID32618.1 - 2e-40 138.7 46.6 2.1e-40 138.6 44.8 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 AID32619.1 - 9.7e-54 182.6 7.4 1.5e-53 182.1 7.4 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID32619.1 - 3e-13 49.8 0.2 4.2e-13 49.4 0.2 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID32619.1 - 6.1e-07 29.9 0.2 0.00016 22.1 0.0 2.4 1 1 1 2 2 2 2 Periplasmic binding protein-like domain DUF3551 PF12071.8 AID32619.1 - 0.016 15.2 0.1 0.034 14.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) Sugar-bind PF04198.13 AID32620.1 - 1.7e-61 207.6 0.8 2.1e-61 207.3 0.8 1.1 1 0 0 1 1 1 1 Putative sugar-binding domain HTH_38 PF13936.6 AID32620.1 - 1.9e-07 30.7 0.1 3.4e-07 29.9 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 AID32620.1 - 6.2e-07 29.0 0.8 1.3e-06 27.9 0.3 1.8 2 0 0 2 2 1 1 Sigma-70, region 4 MarR_2 PF12802.7 AID32620.1 - 1.2e-06 28.3 1.7 3.8e-06 26.7 0.3 2.6 3 0 0 3 3 2 1 MarR family HTH_23 PF13384.6 AID32620.1 - 3.9e-06 26.5 0.2 1.3e-05 24.8 0.2 1.9 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 AID32620.1 - 6.4e-06 26.1 0.2 1.6e-05 24.8 0.2 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID32620.1 - 1.1e-05 24.8 0.2 2.3e-05 23.9 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 AID32620.1 - 1.7e-05 24.2 0.2 3.9e-05 23.1 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 AID32620.1 - 1.8e-05 24.7 0.1 5.6e-05 23.1 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 AID32620.1 - 3e-05 24.1 0.1 0.00011 22.2 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID32620.1 - 0.00016 21.5 0.1 0.00029 20.7 0.1 1.4 1 0 0 1 1 1 1 MarR family LacI PF00356.21 AID32620.1 - 0.0008 19.2 0.1 0.0025 17.6 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_Tnp_ISL3 PF13542.6 AID32620.1 - 0.00086 18.7 0.3 0.0018 17.6 0.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 Crp PF00325.20 AID32620.1 - 0.00097 18.7 0.3 0.0032 17.1 0.4 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family HTH_31 PF13560.6 AID32620.1 - 0.0024 18.2 2.3 0.0044 17.3 0.6 2.4 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID32620.1 - 0.004 16.9 1.1 0.0085 15.9 0.1 2.1 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_3 PF01381.22 AID32620.1 - 0.0042 17.1 0.1 0.012 15.7 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix Trp_repressor PF01371.19 AID32620.1 - 0.0043 17.1 0.1 0.0086 16.2 0.1 1.5 1 0 0 1 1 1 1 Trp repressor protein HTH_11 PF08279.12 AID32620.1 - 0.0063 16.4 0.2 0.013 15.5 0.2 1.4 1 0 0 1 1 1 1 HTH domain YdaS_antitoxin PF15943.5 AID32620.1 - 0.0086 15.9 0.6 0.022 14.6 0.0 1.9 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Fe_dep_repress PF01325.19 AID32620.1 - 0.014 15.6 0.1 0.027 14.6 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Phage_antitermQ PF06530.12 AID32620.1 - 0.02 14.8 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 Phage antitermination protein Q Cro PF09048.10 AID32620.1 - 0.06 13.4 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 Cro HTH_36 PF13730.6 AID32620.1 - 0.068 13.1 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 AID32620.1 - 0.078 12.8 0.4 0.28 11.0 0.1 2.1 2 0 0 2 2 2 0 HTH DNA binding domain DUF134 PF02001.16 AID32620.1 - 0.083 13.5 0.5 0.62 10.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF134 KORA PF16509.5 AID32620.1 - 0.11 12.8 0.1 0.23 11.8 0.1 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor LZ_Tnp_IS481 PF13011.6 AID32620.1 - 0.11 13.0 0.1 0.58 10.7 0.0 2.2 3 0 0 3 3 2 0 leucine-zipper of insertion element IS481 PAX PF00292.18 AID32620.1 - 0.11 12.4 0.0 0.53 10.2 0.0 2.0 2 0 0 2 2 2 0 'Paired box' domain HTH_AsnC-type PF13404.6 AID32620.1 - 0.14 12.0 2.2 0.15 12.0 0.5 2.0 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain CENP-B_N PF04218.13 AID32620.1 - 0.14 11.8 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain DeoC PF01791.9 AID32621.1 - 1.9e-58 197.9 0.0 2.3e-58 197.6 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase ROK PF00480.20 AID32622.1 - 2e-50 172.0 3.0 3e-50 171.4 3.0 1.2 1 0 0 1 1 1 1 ROK family AAA_33 PF13671.6 AID32622.1 - 6.6e-05 23.1 0.0 0.00018 21.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain CPT PF07931.12 AID32622.1 - 0.00011 22.1 1.7 0.063 13.1 0.0 4.1 3 2 1 4 4 4 1 Chloramphenicol phosphotransferase-like protein AAA_18 PF13238.6 AID32622.1 - 0.0065 17.0 0.0 0.024 15.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain SKI PF01202.22 AID32622.1 - 0.052 13.7 0.0 1.1 9.4 0.0 2.5 3 0 0 3 3 3 0 Shikimate kinase Zeta_toxin PF06414.12 AID32622.1 - 0.092 12.0 0.1 0.3 10.3 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin IPT PF01745.16 AID32622.1 - 0.13 11.6 0.0 0.25 10.7 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase KTI12 PF08433.10 AID32622.1 - 0.34 10.3 0.0 1.2 8.5 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 DeoRC PF00455.22 AID32624.1 - 8.2e-44 149.4 0.2 1.1e-43 149.0 0.2 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID32624.1 - 1.4e-14 53.5 0.9 2.8e-14 52.6 0.9 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain PK PF00224.21 AID32624.1 - 0.012 14.6 0.0 0.016 14.1 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain GntR PF00392.21 AID32624.1 - 0.39 10.4 3.8 0.18 11.5 0.9 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 AID32624.1 - 1.3 9.1 5.8 1.2 9.2 0.5 2.9 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain NAD_binding_10 PF13460.6 AID32626.1 - 2e-33 115.8 0.0 2.3e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AID32626.1 - 2.6e-08 33.7 0.2 3.5e-08 33.3 0.2 1.2 1 0 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 AID32626.1 - 5.4e-08 33.2 0.0 1.2e-07 32.0 0.1 1.5 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 AID32626.1 - 6.5e-08 32.3 0.2 1.3e-07 31.4 0.2 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 AID32626.1 - 0.00031 21.0 0.1 0.0005 20.3 0.1 1.3 1 0 0 1 1 1 1 TrkA-N domain RmlD_sub_bind PF04321.17 AID32626.1 - 0.0011 18.1 0.0 0.0017 17.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Semialdhyde_dh PF01118.24 AID32626.1 - 0.0033 17.8 0.2 0.0092 16.4 0.2 1.9 2 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 AID32626.1 - 0.0069 16.5 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 3Beta_HSD PF01073.19 AID32626.1 - 0.011 14.7 0.0 0.013 14.5 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_2 PF03446.15 AID32626.1 - 0.013 15.7 0.0 0.017 15.3 0.0 1.3 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 AID32626.1 - 0.026 13.8 0.3 0.035 13.4 0.3 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GDP_Man_Dehyd PF16363.5 AID32626.1 - 0.031 13.7 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase ApbA PF02558.16 AID32626.1 - 0.036 13.7 0.1 0.059 13.0 0.1 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DapB_N PF01113.20 AID32626.1 - 0.094 12.8 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DSBA PF01323.20 AID32627.1 - 7.4e-07 29.1 0.0 2.2e-06 27.6 0.0 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 AID32627.1 - 0.026 14.2 0.0 0.12 12.1 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin LysR_substrate PF03466.20 AID32628.1 - 8.3e-38 129.9 1.6 1.1e-37 129.5 1.6 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32628.1 - 4.5e-21 74.6 0.7 1.3e-20 73.1 0.7 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Flp_Fap PF04964.14 AID32629.1 - 3.2e-06 26.8 0.1 4e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 Flp/Fap pilin component Peptidase_M23 PF01551.22 AID32630.1 - 4e-29 100.7 1.4 8.6e-29 99.6 1.4 1.6 1 0 0 1 1 1 1 Peptidase family M23 TUSC2 PF15000.6 AID32630.1 - 0.17 12.2 0.2 0.36 11.1 0.2 1.5 1 0 0 1 1 1 0 Tumour suppressor candidate 2 MFS_1 PF07690.16 AID32631.1 - 6.4e-53 179.9 54.5 6.4e-53 179.9 54.5 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID32631.1 - 3.8e-08 32.6 10.2 3.8e-08 32.6 10.2 2.7 3 0 0 3 3 3 1 Sugar (and other) transporter MFS_3 PF05977.13 AID32631.1 - 1.7e-05 23.4 17.9 1.7e-05 23.4 17.9 2.7 1 1 1 3 3 3 2 Transmembrane secretion effector MFS_1_like PF12832.7 AID32631.1 - 0.0068 15.3 20.6 0.033 13.0 1.9 3.1 3 0 0 3 3 3 2 MFS_1 like family OATP PF03137.20 AID32631.1 - 1.6 7.0 9.7 0.068 11.4 0.3 2.7 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF1211 PF06736.11 AID32632.1 - 7.4e-08 32.7 0.1 9e-08 32.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1211) Transposase_mut PF00872.18 AID32633.1 - 2.4e-129 431.5 0.0 3e-129 431.2 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 AID32633.1 - 2.6e-05 24.5 0.0 5.2e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 AID32633.1 - 0.0078 15.7 0.0 0.048 13.1 0.0 2.1 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.6 AID32633.1 - 0.015 15.5 0.0 8.8 6.5 0.0 2.4 2 1 0 2 2 2 0 DDE domain DUF1211 PF06736.11 AID32634.1 - 9.4e-07 29.2 4.2 1.6e-06 28.4 0.3 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF1211) YkuD PF03734.14 AID32635.1 - 3.3e-19 69.8 0.0 6.4e-19 68.8 0.0 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain PG_binding_1 PF01471.18 AID32635.1 - 0.024 14.8 0.0 0.089 13.0 0.0 2.0 1 0 0 1 1 1 0 Putative peptidoglycan binding domain YjbR PF04237.13 AID32636.1 - 1.5e-14 54.3 0.0 1.8e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 YjbR AAA_2 PF07724.14 AID32637.1 - 9.8e-60 201.5 0.1 9.5e-56 188.6 0.0 3.3 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 AID32637.1 - 2e-36 124.0 4.2 2e-36 124.0 4.2 2.5 2 0 0 2 2 2 1 AAA lid domain Clp_N PF02861.20 AID32637.1 - 2.8e-29 101.0 7.4 1.3e-14 54.1 0.2 3.1 3 0 0 3 3 2 2 Clp amino terminal domain, pathogenicity island component ClpB_D2-small PF10431.9 AID32637.1 - 1.6e-26 92.1 3.4 1.9e-26 91.9 0.5 2.7 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 AID32637.1 - 9.7e-24 84.3 0.1 7.7e-12 45.8 0.0 3.4 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID32637.1 - 1.5e-19 70.4 1.9 2.5e-13 50.2 0.0 4.3 4 1 1 5 5 4 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AID32637.1 - 5.4e-11 43.2 3.1 0.0005 20.5 0.0 4.6 3 3 0 4 4 3 2 AAA ATPase domain AAA_22 PF13401.6 AID32637.1 - 3.6e-09 37.0 1.8 0.018 15.3 0.0 4.7 3 2 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 AID32637.1 - 2.1e-08 34.1 0.1 0.026 14.3 0.0 3.8 4 0 0 4 4 4 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 AID32637.1 - 3.6e-08 33.3 0.1 0.00058 19.6 0.0 3.0 2 1 0 2 2 2 2 Sigma-54 interaction domain TniB PF05621.11 AID32637.1 - 6.7e-06 25.6 0.0 0.0013 18.2 0.0 3.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_18 PF13238.6 AID32637.1 - 0.00015 22.3 0.0 0.61 10.6 0.0 3.1 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 AID32637.1 - 0.00015 21.5 0.4 5.2 6.8 0.2 4.3 3 1 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 AID32637.1 - 0.00019 21.0 0.0 0.15 11.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region Mg_chelatase PF01078.21 AID32637.1 - 0.00022 20.7 0.3 1.4 8.3 0.0 3.5 2 2 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 AID32637.1 - 0.00029 20.6 0.0 1.1 8.9 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_23 PF13476.6 AID32637.1 - 0.00054 20.5 9.6 0.11 12.9 0.0 3.6 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID32637.1 - 0.00088 18.9 0.1 0.081 12.5 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 AID32637.1 - 0.0014 18.4 0.0 0.2 11.5 0.0 3.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID32637.1 - 0.0015 18.5 0.0 0.52 10.2 0.0 2.7 2 0 0 2 2 2 1 RsgA GTPase RNA_helicase PF00910.22 AID32637.1 - 0.0016 18.8 0.0 2.1 8.8 0.0 2.9 3 0 0 3 3 2 1 RNA helicase ATPase_2 PF01637.18 AID32637.1 - 0.0017 18.3 0.0 21 4.9 0.0 3.8 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea Roc PF08477.13 AID32637.1 - 0.0018 18.5 0.0 1.4 9.1 0.0 2.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 AID32637.1 - 0.0026 18.0 1.6 3.2 8.0 0.0 4.1 4 0 0 4 4 4 1 AAA domain NACHT PF05729.12 AID32637.1 - 0.0031 17.5 0.0 0.49 10.3 0.0 2.6 2 0 0 2 2 2 1 NACHT domain AAA_33 PF13671.6 AID32637.1 - 0.0072 16.5 0.3 11 6.2 0.0 3.6 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 AID32637.1 - 0.0081 16.7 0.2 2.4 8.7 0.0 3.5 3 0 0 3 3 3 1 ABC transporter TsaE PF02367.17 AID32637.1 - 0.011 15.8 0.0 3.3 7.7 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 AID32637.1 - 0.029 13.6 0.1 6.5 6.0 0.0 2.9 2 1 1 3 3 3 0 Zeta toxin T2SSE PF00437.20 AID32637.1 - 0.035 13.2 0.0 0.11 11.5 0.0 1.8 2 0 0 2 2 1 0 Type II/IV secretion system protein ResIII PF04851.15 AID32637.1 - 0.098 12.6 0.0 24 4.9 0.0 3.2 2 1 1 3 3 3 0 Type III restriction enzyme, res subunit DNA_pol3_delta2 PF13177.6 AID32637.1 - 0.12 12.1 0.0 14 5.4 0.0 2.7 3 0 0 3 3 2 0 DNA polymerase III, delta subunit Lant_dehydr_C PF14028.6 AID32637.1 - 0.16 11.5 2.0 0.42 10.1 2.0 1.7 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term DUF4167 PF13763.6 AID32638.1 - 1.6e-31 108.2 9.8 1.6e-31 108.2 9.8 3.1 2 2 0 2 2 2 1 Domain of unknown function (DUF4167) PrmC_N PF17827.1 AID32639.1 - 1.2e-16 61.0 0.1 3.4e-16 59.6 0.1 1.8 2 0 0 2 2 1 1 PrmC N-terminal domain MTS PF05175.14 AID32639.1 - 2.2e-12 46.9 0.0 4e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 AID32639.1 - 1.6e-11 44.2 0.0 2.3e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID32639.1 - 1.5e-09 38.4 0.0 2.8e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 AID32639.1 - 3.3e-05 23.4 0.0 5.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 AID32639.1 - 6.4e-05 23.6 0.0 0.00012 22.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32639.1 - 6.9e-05 23.4 0.0 0.00015 22.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 AID32639.1 - 0.0001 22.3 0.0 0.00017 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32639.1 - 0.00018 21.4 0.0 0.00028 20.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 AID32639.1 - 0.00043 20.0 0.0 0.00075 19.2 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 UPF0020 PF01170.18 AID32639.1 - 0.00048 19.9 0.0 0.0021 17.7 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_2 PF00891.18 AID32639.1 - 0.0029 16.9 0.0 0.0051 16.1 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 AID32639.1 - 0.0081 16.2 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID32639.1 - 0.052 12.9 0.0 0.084 12.2 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 AID32639.1 - 0.093 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Androgen_recep PF02166.16 AID32639.1 - 0.099 11.5 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Androgen receptor TrmK PF04816.12 AID32639.1 - 0.2 11.2 0.0 0.41 10.1 0.0 1.5 2 0 0 2 2 2 0 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_33 PF10017.9 AID32639.1 - 0.22 10.7 0.0 0.39 9.8 0.0 1.4 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent PCRF PF03462.18 AID32640.1 - 1.8e-66 223.7 1.4 1.9e-66 223.7 0.2 1.6 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 AID32640.1 - 6.1e-40 135.8 2.8 1.3e-39 134.7 2.8 1.5 1 0 0 1 1 1 1 RF-1 domain DUF2730 PF10805.8 AID32640.1 - 0.056 13.5 0.3 1.3 9.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) PEP-utilizers_C PF02896.18 AID32641.1 - 2.6e-86 289.4 0.0 3.9e-86 288.8 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 AID32641.1 - 8.8e-23 80.7 0.4 3.7e-22 78.7 0.0 2.3 3 0 0 3 3 3 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 AID32641.1 - 1.9e-16 59.6 1.0 4e-16 58.5 1.0 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain GAF_2 PF13185.6 AID32641.1 - 7.3e-16 58.7 0.3 2.8e-15 56.8 0.3 2.1 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 AID32641.1 - 1.6e-13 51.4 0.1 4.9e-13 49.9 0.1 1.9 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 AID32641.1 - 4.3e-05 23.8 0.2 9.3e-05 22.8 0.2 1.6 1 0 0 1 1 1 1 GAF domain DUF4774 PF15999.5 AID32641.1 - 0.023 14.5 0.2 0.064 13.1 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) AA_kinase PF00696.28 AID32642.1 - 3.7e-42 144.6 1.7 3.7e-42 144.6 1.7 1.5 2 0 0 2 2 2 1 Amino acid kinase family ACT PF01842.25 AID32642.1 - 2.7e-22 78.2 1.3 3.3e-14 52.4 0.1 2.7 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 AID32642.1 - 9.3e-20 70.2 0.5 5e-12 45.4 0.3 2.9 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.6 AID32642.1 - 0.059 14.0 0.1 1.8 9.2 0.0 2.5 2 0 0 2 2 2 0 ACT domain Mycobact_memb PF05423.13 AID32643.1 - 0.18 11.7 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Mycobacterium membrane protein CHASE3 PF05227.13 AID32644.1 - 4.3e-35 120.6 5.3 6e-35 120.2 5.3 1.2 1 0 0 1 1 1 1 CHASE3 domain 4HB_MCP_1 PF12729.7 AID32644.1 - 0.2 11.2 0.9 0.46 10.0 0.9 1.9 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction HATPase_c PF02518.26 AID32645.1 - 4.2e-19 69.1 0.0 9.3e-19 68.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID32645.1 - 2.1e-17 63.3 0.0 4.4e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HisKA PF00512.25 AID32645.1 - 1.6e-06 28.0 0.1 4.3e-06 26.7 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID32645.1 - 0.0031 17.4 0.0 0.0066 16.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CbtB PF09489.10 AID32645.1 - 0.087 12.9 0.1 0.32 11.2 0.1 2.0 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) Imm71 PF15602.6 AID32645.1 - 0.1 12.7 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Immunity protein 71 PhoPQ_related PF10142.9 AID32645.1 - 0.13 10.9 0.0 0.22 10.2 0.0 1.2 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Glycolipid_bind PF06475.11 AID32646.1 - 1.3e-46 158.3 0.0 1.5e-46 158.2 0.0 1.0 1 0 0 1 1 1 1 Putative glycolipid-binding Methyltransf_23 PF13489.6 AID32647.1 - 1.7e-22 80.0 0.0 2.4e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32647.1 - 4.6e-20 72.1 0.2 1.1e-19 70.9 0.2 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID32647.1 - 2e-16 60.5 0.3 3.4e-16 59.7 0.3 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32647.1 - 4.7e-14 52.9 0.1 7.4e-14 52.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32647.1 - 3.1e-13 49.8 0.0 3.8e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID32647.1 - 7.3e-13 48.4 0.0 9.7e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 AID32647.1 - 4.4e-06 26.3 0.2 5.9e-06 25.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 AID32647.1 - 2.3e-05 23.9 0.0 2.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 AID32647.1 - 2.4e-05 24.0 0.1 4.1e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 AID32647.1 - 0.00074 19.2 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 AID32647.1 - 0.0017 17.3 0.0 0.0024 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) DREV PF05219.12 AID32647.1 - 0.0026 16.9 0.0 0.0037 16.4 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase ADH_zinc_N PF00107.26 AID32647.1 - 0.015 15.3 1.6 0.027 14.4 1.6 1.4 1 1 0 1 1 1 0 Zinc-binding dehydrogenase TPMT PF05724.11 AID32647.1 - 0.034 13.8 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 AID32647.1 - 0.041 13.9 0.0 0.059 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N_2 PF13602.6 AID32647.1 - 0.065 14.3 0.0 0.11 13.5 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Flavin_Reduct PF01613.18 AID32648.1 - 3e-30 105.3 0.0 3.4e-30 105.1 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Bac_luciferase PF00296.20 AID32649.1 - 1.3e-65 221.9 4.0 1.5e-65 221.7 4.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase HTH_27 PF13463.6 AID32650.1 - 1.5e-14 54.2 0.0 3.2e-14 53.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 AID32650.1 - 1.9e-05 24.4 0.2 6e-05 22.8 0.0 1.9 2 0 0 2 2 2 1 MarR family Replic_Relax PF13814.6 AID32650.1 - 0.0049 17.0 0.1 0.0076 16.3 0.1 1.2 1 0 0 1 1 1 1 Replication-relaxation STAS_2 PF13466.6 AID32650.1 - 0.023 15.0 0.0 0.063 13.6 0.0 1.7 1 1 0 1 1 1 0 STAS domain DUF4423 PF14394.6 AID32650.1 - 0.029 14.1 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF1194 PF06707.11 AID32650.1 - 0.081 12.1 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1194) HTH_20 PF12840.7 AID32650.1 - 0.092 12.8 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 AID32650.1 - 0.11 12.4 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB EamA PF00892.20 AID32651.1 - 1.3e-16 61.0 40.5 1.3e-10 41.6 17.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 AID32651.1 - 0.00015 20.8 8.1 0.0014 17.6 2.0 2.2 2 0 0 2 2 2 2 CRT-like, chloroquine-resistance transporter-like Nuc_sug_transp PF04142.15 AID32651.1 - 0.079 12.1 4.4 0.14 11.3 0.0 2.7 2 1 1 3 3 3 0 Nucleotide-sugar transporter MarR_2 PF12802.7 AID32652.1 - 8.4e-15 54.4 0.1 1.4e-13 50.5 0.1 2.3 2 0 0 2 2 2 1 MarR family MarR PF01047.22 AID32652.1 - 2.8e-13 49.6 0.0 5.7e-13 48.6 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID32652.1 - 3e-07 30.8 0.1 6.5e-07 29.7 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_34 PF13601.6 AID32652.1 - 0.00056 20.0 0.0 0.00091 19.4 0.0 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID32652.1 - 0.024 14.7 0.4 0.075 13.1 0.0 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 AID32652.1 - 0.029 13.9 0.0 0.07 12.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HxlR PF01638.17 AID32652.1 - 0.053 13.4 0.0 0.095 12.6 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF1178 PF06676.11 AID32653.1 - 9.6e-53 178.6 0.7 1.6e-52 177.9 0.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1178) DUF1382 PF07131.11 AID32653.1 - 0.00021 21.2 0.7 0.0027 17.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1382) Zn-ribbon_8 PF09723.10 AID32653.1 - 0.0039 17.3 0.8 0.01 15.9 0.8 1.8 1 1 0 1 1 1 1 Zinc ribbon domain CpXC PF14353.6 AID32653.1 - 0.039 14.0 0.1 0.061 13.4 0.1 1.5 1 1 0 1 1 1 0 CpXC protein CGGC PF08821.11 AID32653.1 - 0.082 13.1 0.1 0.15 12.2 0.1 1.4 1 1 0 1 1 1 0 CGGC domain CN_hydrolase PF00795.22 AID32654.1 - 1.7e-47 161.9 0.1 2e-47 161.7 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Glutaredoxin PF00462.24 AID32655.1 - 1.4e-20 73.2 0.0 1.8e-20 72.9 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin SH3BGR PF04908.15 AID32655.1 - 0.021 15.0 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein DUF836 PF05768.14 AID32655.1 - 0.055 13.9 0.0 0.07 13.6 0.0 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Pribosyltran PF00156.27 AID32656.1 - 5e-10 39.1 0.1 7.5e-10 38.6 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID32656.1 - 0.00046 19.7 0.0 0.00057 19.4 0.0 1.3 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 AID32656.1 - 0.091 12.3 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase PRTase_3 PF15610.6 AID32656.1 - 0.16 11.2 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 PRTase ComF-like Methyltransf_11 PF08241.12 AID32657.1 - 6.3e-06 26.8 0.0 1.3e-05 25.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID32657.1 - 0.0035 18.0 0.0 0.0087 16.7 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32657.1 - 0.0037 18.0 0.0 0.0096 16.6 0.0 1.8 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32657.1 - 0.02 14.7 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 AID32657.1 - 0.12 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Flp_Fap PF04964.14 AID32658.1 - 2.9e-17 62.2 0.5 3.3e-17 62.0 0.5 1.1 1 0 0 1 1 1 1 Flp/Fap pilin component Flp1_like PF16982.5 AID32658.1 - 0.0017 17.7 0.2 0.0028 17.0 0.2 1.5 1 1 0 1 1 1 1 Putative Flagellin, Flp1-like, domain NUDIX PF00293.28 AID32660.1 - 3.1e-23 82.2 0.0 3.7e-23 82.0 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 AID32660.1 - 6.4e-22 77.6 0.0 7.5e-22 77.4 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 AID32660.1 - 0.21 11.1 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Nucleotide hydrolase Acetyltransf_1 PF00583.25 AID32661.1 - 5.1e-12 46.1 0.0 7.6e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID32661.1 - 8.5e-08 32.5 0.0 1.6e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID32661.1 - 1.1e-06 28.4 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 AID32661.1 - 1.4e-06 28.2 0.0 4.1e-06 26.8 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 AID32661.1 - 0.00024 21.3 0.1 0.00061 20.0 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID32661.1 - 0.013 16.1 0.0 0.018 15.7 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID32661.1 - 0.076 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ArgJ PF01960.18 AID32662.1 - 1.4e-138 461.7 4.9 1.6e-138 461.6 4.9 1.0 1 0 0 1 1 1 1 ArgJ family TBP PF00352.21 AID32662.1 - 0.12 12.3 0.1 5 7.1 0.0 2.7 2 0 0 2 2 2 0 Transcription factor TFIID (or TATA-binding protein, TBP) Peptidase_C14 PF00656.22 AID32663.1 - 6.2e-33 114.8 0.0 8e-33 114.4 0.0 1.1 1 0 0 1 1 1 1 Caspase domain SnoaL_3 PF13474.6 AID32663.1 - 0.0015 18.8 0.2 0.0027 18.0 0.2 1.4 1 0 0 1 1 1 1 SnoaL-like domain MFS_1 PF07690.16 AID32665.1 - 7.2e-36 123.8 84.8 3.1e-28 98.7 44.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID32665.1 - 2.1e-05 24.0 38.3 2.7e-05 23.6 38.3 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB TetR_C_11 PF16859.5 AID32666.1 - 2e-23 82.9 0.2 2e-23 82.9 0.2 1.6 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID32666.1 - 2.6e-14 52.7 6.6 3.9e-14 52.2 0.2 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_Tnp_IS630 PF01710.16 AID32666.1 - 0.0048 16.9 0.0 0.0079 16.2 0.0 1.3 1 0 0 1 1 1 1 Transposase DUF2201_N PF13203.6 AID32666.1 - 0.038 13.6 0.1 0.057 13.0 0.1 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain HTH_Tnp_1_2 PF13022.6 AID32666.1 - 0.058 13.5 0.0 3.6 7.8 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix of insertion element transposase MurB_C PF02873.16 AID32666.1 - 0.082 13.0 0.1 0.29 11.2 0.0 1.8 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TetR_C_6 PF13977.6 AID32666.1 - 0.26 11.5 4.1 0.072 13.3 0.8 1.9 2 1 0 2 2 2 0 BetI-type transcriptional repressor, C-terminal Rotamase_3 PF13616.6 AID32667.1 - 2.6e-25 89.2 0.0 4.9e-25 88.3 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 AID32667.1 - 2.5e-23 82.8 0.0 1e-22 80.9 0.0 2.1 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 AID32667.1 - 3.6e-19 69.8 0.1 3.6e-19 69.8 0.1 2.3 2 1 0 2 2 2 1 PPIC-type PPIASE domain SecA_DEAD PF07517.14 AID32668.1 - 5.4e-131 436.2 0.4 9.3e-131 435.4 0.4 1.4 1 0 0 1 1 1 1 SecA DEAD-like domain SecA_SW PF07516.13 AID32668.1 - 1.6e-64 217.6 1.3 1.6e-64 217.6 1.3 2.3 3 0 0 3 3 3 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 AID32668.1 - 2.6e-39 134.3 0.4 2.6e-39 134.3 0.4 2.0 2 0 0 2 2 2 1 SecA preprotein cross-linking domain SEC-C PF02810.15 AID32668.1 - 2.1e-10 40.3 6.6 3.7e-10 39.5 6.6 1.4 1 0 0 1 1 1 1 SEC-C motif DEAD PF00270.29 AID32668.1 - 0.00028 20.7 0.1 0.0016 18.3 0.0 2.2 3 0 0 3 3 3 1 DEAD/DEAH box helicase YflT PF11181.8 AID32668.1 - 0.0075 16.8 2.6 0.028 14.9 0.0 3.2 3 0 0 3 3 3 1 Heat induced stress protein YflT Helicase_C PF00271.31 AID32668.1 - 0.087 13.2 0.8 0.35 11.2 0.0 2.3 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Polysacc_synt PF01943.17 AID32669.1 - 2.1e-15 56.9 24.0 2.1e-15 56.9 24.0 2.1 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 AID32669.1 - 4.5e-10 39.7 8.6 4.5e-10 39.7 8.6 4.4 1 1 3 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Acetyltransf_6 PF13480.7 AID32670.1 - 4.8e-25 88.4 6.1 1.4e-24 86.9 3.3 2.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Creatininase PF02633.14 AID32671.1 - 4.6e-42 144.1 0.0 6.3e-42 143.7 0.0 1.2 1 0 0 1 1 1 1 Creatinine amidohydrolase Cytochrom_D1 PF02239.16 AID32672.1 - 9.3e-08 31.0 0.1 0.36 9.3 0.1 3.7 2 1 0 3 3 3 3 Cytochrome D1 heme domain Lactonase PF10282.9 AID32672.1 - 1.5e-07 31.0 0.0 0.011 15.1 0.0 3.4 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 AID32672.1 - 0.003 17.2 0.0 0.024 14.2 0.0 2.3 2 1 0 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region Me-amine-dh_H PF06433.11 AID32672.1 - 0.017 14.0 0.1 0.043 12.7 0.1 1.7 2 0 0 2 2 2 0 Methylamine dehydrogenase heavy chain (MADH) Arylesterase PF01731.20 AID32672.1 - 0.033 14.4 0.0 0.18 12.0 0.0 2.2 3 0 0 3 3 3 0 Arylesterase NHL PF01436.21 AID32672.1 - 0.044 13.8 0.1 16 5.8 0.0 3.5 3 0 0 3 3 3 0 NHL repeat DUF1513 PF07433.11 AID32672.1 - 0.082 12.0 0.0 0.25 10.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1513) PD40 PF07676.12 AID32672.1 - 0.1 12.5 0.0 18 5.4 0.0 3.6 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat SBP56 PF05694.11 AID32672.1 - 0.15 10.9 0.4 21 3.8 0.0 3.1 2 1 0 3 3 3 0 56kDa selenium binding protein (SBP56) DUF481 PF04338.12 AID32673.1 - 1.5e-05 25.2 4.5 0.0085 16.1 0.7 2.3 1 1 2 3 3 3 3 Protein of unknown function, DUF481 Autotransporter PF03797.19 AID32673.1 - 0.00033 20.4 8.0 0.00065 19.4 8.0 1.6 1 1 0 1 1 1 1 Autotransporter beta-domain DUF2490 PF10677.9 AID32673.1 - 0.0023 17.9 6.1 0.1 12.5 2.8 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2490) OMP_b-brl PF13505.6 AID32673.1 - 0.0041 17.3 10.9 0.007 16.5 10.9 1.5 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF2715 PF10895.8 AID32673.1 - 0.044 13.4 0.6 0.26 10.9 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2715) Hen1_Lam_C PF18441.1 AID32673.1 - 0.091 12.6 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 0 Hen1 La-motif C-terminal domain SNARE_assoc PF09335.11 AID32674.1 - 0.00035 21.1 5.7 0.00035 21.1 5.7 1.8 2 1 0 2 2 2 1 SNARE associated Golgi protein DUF3169 PF11368.8 AID32674.1 - 0.091 12.3 4.4 16 4.9 4.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) Form_Nir_trans PF01226.17 AID32674.1 - 0.26 10.6 0.1 0.26 10.6 0.1 2.5 2 1 0 2 2 2 0 Formate/nitrite transporter DsbB PF02600.16 AID32675.1 - 1.4e-30 106.7 3.9 1.9e-30 106.2 3.9 1.1 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB MerC PF03203.14 AID32675.1 - 0.26 11.7 9.3 0.46 11.0 4.4 2.4 1 1 1 2 2 2 0 MerC mercury resistance protein HNH_5 PF14279.6 AID32676.1 - 1.5e-14 53.5 0.0 2.1e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 AID32676.1 - 8e-14 51.5 0.1 1.2e-13 50.9 0.1 1.3 1 0 0 1 1 1 1 HNH endonuclease HNH_4 PF13395.6 AID32676.1 - 0.0022 17.9 0.0 0.0042 17.0 0.0 1.5 1 0 0 1 1 1 1 HNH endonuclease HhH-GPD PF00730.25 AID32677.1 - 3.1e-17 63.0 0.0 4.4e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.6 AID32677.1 - 0.084 13.5 0.1 1.9 9.1 0.0 3.0 2 1 0 3 3 3 0 Helix-hairpin-helix domain tRNA-synt_1c PF00749.21 AID32678.1 - 9.2e-49 166.0 0.0 2.2e-48 164.8 0.0 1.5 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1 PF00133.22 AID32678.1 - 0.035 12.3 0.0 2.9 6.0 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (I, L, M and V) EamA PF00892.20 AID32679.1 - 4.1e-28 98.2 40.6 5.2e-16 59.1 14.7 2.0 2 0 0 2 2 2 2 EamA-like transporter family RseC_MucC PF04246.12 AID32679.1 - 0.061 13.3 0.4 0.061 13.3 0.4 4.8 1 1 3 4 4 4 0 Positive regulator of sigma(E), RseC/MucC DUF3272 PF11676.8 AID32679.1 - 0.42 10.9 4.6 9.6 6.5 0.2 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3272) Virul_fac_BrkB PF03631.15 AID32680.1 - 4.2e-47 160.9 27.9 4.7e-47 160.8 27.9 1.0 1 0 0 1 1 1 1 Virulence factor BrkB Reticulon PF02453.17 AID32680.1 - 0.029 14.3 2.4 0.029 14.3 2.4 3.1 2 2 1 3 3 3 0 Reticulon DUF5083 PF16890.5 AID32680.1 - 0.079 12.7 0.2 0.079 12.7 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5083) adh_short PF00106.25 AID32681.1 - 1e-39 136.0 0.0 1.3e-39 135.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32681.1 - 1.3e-30 106.7 0.0 1.7e-30 106.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.6 AID32681.1 - 1.6e-08 34.7 0.0 2.3e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 AID32681.1 - 1.1e-07 31.9 0.0 1.7e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID32681.1 - 6.5e-07 29.1 0.0 1.9e-06 27.6 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 AID32681.1 - 0.0019 17.8 0.0 0.0027 17.3 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family ADH_zinc_N PF00107.26 AID32681.1 - 0.0028 17.7 0.0 0.0044 17.0 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase RmlD_sub_bind PF04321.17 AID32681.1 - 0.041 13.0 0.0 0.062 12.4 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain TrkA_N PF02254.18 AID32681.1 - 0.16 12.3 0.0 0.34 11.2 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain HIG_1_N PF04588.13 AID32682.1 - 3.2e-13 49.7 8.9 3.7e-13 49.5 8.9 1.1 1 0 0 1 1 1 1 Hypoxia induced protein conserved region DUF2909 PF11137.8 AID32682.1 - 0.0015 18.4 9.4 0.0019 18.1 9.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2909) DUF4149 PF13664.6 AID32682.1 - 0.042 14.2 2.9 0.045 14.1 2.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) CopD PF05425.13 AID32682.1 - 0.048 14.1 8.2 0.05 14.0 8.2 1.1 1 0 0 1 1 1 0 Copper resistance protein D DUF4244 PF14029.6 AID32682.1 - 5.6 6.5 9.1 9.4 5.8 3.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4244) FeoB_associated PF12669.7 AID32682.1 - 9.9 6.7 6.7 4.9 7.6 1.4 2.0 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Cob_adeno_trans PF01923.18 AID32683.1 - 1.7e-59 200.6 0.0 2e-59 200.4 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Rhomboid PF01694.22 AID32684.1 - 3.3e-36 124.5 11.6 3.3e-36 124.5 11.6 1.4 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 AID32684.1 - 0.27 11.8 7.4 0.23 12.1 0.7 3.2 3 1 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) ETF PF01012.21 AID32685.1 - 2.4e-46 157.9 5.1 3.2e-46 157.5 5.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Ala_racemase_N PF01168.20 AID32685.1 - 0.063 12.9 1.3 0.15 11.7 0.8 1.7 2 0 0 2 2 2 0 Alanine racemase, N-terminal domain ETF PF01012.21 AID32686.1 - 5.5e-38 130.7 13.6 9.5e-38 129.9 13.6 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 AID32686.1 - 8.2e-34 115.5 0.4 8.2e-34 115.5 0.4 2.7 2 1 0 2 2 2 1 Electron transfer flavoprotein FAD-binding domain GHMP_kinases_C PF08544.13 AID32686.1 - 0.04 14.3 0.4 0.15 12.5 0.3 2.0 1 1 1 2 2 2 0 GHMP kinases C terminal Mannitol_dh PF01232.23 AID32686.1 - 0.098 12.8 0.1 0.2 11.8 0.1 1.5 1 0 0 1 1 1 0 Mannitol dehydrogenase Rossmann domain 3HCDH_N PF02737.18 AID32687.1 - 1.2e-60 204.5 0.1 1.6e-60 204.1 0.1 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 AID32687.1 - 7.2e-35 119.5 0.0 3.1e-34 117.4 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 AID32687.1 - 1.2e-06 28.8 0.3 2.5e-06 27.8 0.3 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 AID32687.1 - 0.00036 21.1 1.4 0.00074 20.1 1.4 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 AID32687.1 - 0.00089 18.7 0.4 0.0019 17.6 0.4 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AID32687.1 - 0.013 15.9 0.0 0.024 15.1 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 AID32687.1 - 0.022 14.3 0.1 0.034 13.7 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 AID32687.1 - 0.14 12.4 0.1 0.27 11.5 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 AID32687.1 - 0.18 11.1 1.2 1.8 7.8 0.6 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_Gly3P_dh_N PF01210.23 AID32687.1 - 0.22 11.5 0.5 0.47 10.4 0.1 1.9 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PAS_3 PF08447.12 AID32688.1 - 1.2e-39 134.5 0.1 7.7e-24 83.8 0.2 3.4 3 0 0 3 3 3 2 PAS fold GGDEF PF00990.21 AID32688.1 - 4.6e-39 133.8 0.0 9.3e-39 132.8 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_9 PF13426.7 AID32688.1 - 1.4e-31 108.9 0.0 1.7e-13 50.7 0.0 3.3 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 AID32688.1 - 6.9e-30 103.3 0.2 9.2e-12 45.0 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 AID32688.1 - 1.8e-18 66.1 0.1 3.6e-09 36.4 0.0 3.7 3 0 0 3 3 3 2 PAS domain PAS_4 PF08448.10 AID32688.1 - 1.9e-18 66.7 1.6 9.5e-05 22.6 0.1 3.7 3 1 0 3 3 3 3 PAS fold PAS_7 PF12860.7 AID32688.1 - 8.5e-05 22.7 0.2 0.97 9.6 0.0 4.0 3 1 0 3 3 3 1 PAS fold PAS_11 PF14598.6 AID32688.1 - 0.00013 22.1 0.0 0.26 11.4 0.0 2.4 2 0 0 2 2 2 2 PAS domain PAS_10 PF13596.6 AID32688.1 - 0.024 15.2 0.0 0.35 11.5 0.0 2.5 2 0 0 2 2 2 0 PAS domain LapA_dom PF06305.11 AID32688.1 - 0.19 11.6 0.1 0.57 10.0 0.1 1.8 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain NrsF PF06532.11 AID32689.1 - 1.3e-54 185.1 38.6 1.5e-54 184.8 38.6 1.0 1 0 0 1 1 1 1 Negative regulator of sigma F Sigma70_r4_2 PF08281.12 AID32690.1 - 2.4e-12 46.3 0.0 6.5e-12 44.9 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 AID32690.1 - 5.9e-12 45.2 1.4 1.2e-11 44.2 1.4 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID32690.1 - 6.5e-09 35.2 0.0 2e-08 33.6 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID32690.1 - 7.1e-07 29.3 0.2 4.6e-06 26.6 0.2 1.9 1 1 0 1 1 1 1 ECF sigma factor HTH_28 PF13518.6 AID32690.1 - 0.00062 19.8 0.1 0.0027 17.8 0.1 2.2 1 1 0 1 1 1 1 Helix-turn-helix domain PaaX PF07848.12 AID32690.1 - 0.051 13.8 0.4 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 PaaX-like protein DUF4194 PF13835.6 AID32690.1 - 0.073 12.8 0.3 1.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4194) SBP_bac_6 PF13343.6 AID32691.1 - 6.5e-29 101.1 2.3 1.1e-28 100.3 2.3 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32691.1 - 2.9e-23 83.3 13.4 6.6e-23 82.1 13.4 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32691.1 - 1.9e-20 73.8 10.1 2.6e-20 73.4 10.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32691.1 - 1.4e-19 70.8 6.1 2.1e-19 70.2 6.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein GrlR PF16518.5 AID32691.1 - 0.17 11.9 1.6 0.34 10.9 0.5 1.9 2 0 0 2 2 2 0 T3SS negative regulator,GrlR BPD_transp_1 PF00528.22 AID32692.1 - 2.4e-24 86.1 41.4 2.3e-14 53.6 17.0 3.7 2 2 1 4 4 4 2 Binding-protein-dependent transport system inner membrane component DUF4293 PF14126.6 AID32692.1 - 6.5 7.0 13.3 8.1 6.7 3.1 3.8 3 1 0 3 3 3 0 Domain of unknown function (DUF4293) ABC_tran PF00005.27 AID32693.1 - 1.7e-37 129.0 0.0 2.6e-37 128.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32693.1 - 2.1e-09 37.6 0.0 0.00084 19.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32693.1 - 3.7e-05 23.3 0.2 0.036 13.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID32693.1 - 0.00046 20.4 0.3 0.0062 16.8 0.3 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.6 AID32693.1 - 0.0011 19.4 1.3 0.0039 17.6 1.3 1.9 1 1 0 1 1 1 1 AAA ATPase domain TOBE_2 PF08402.10 AID32693.1 - 0.0016 18.6 0.0 0.035 14.3 0.0 2.7 2 0 0 2 2 2 1 TOBE domain AAA_23 PF13476.6 AID32693.1 - 0.0025 18.3 0.0 0.0038 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID32693.1 - 0.0047 17.2 0.7 0.026 14.8 0.1 2.1 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID32693.1 - 0.015 15.0 0.1 0.03 14.1 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 AID32693.1 - 0.016 15.4 0.1 0.074 13.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID32693.1 - 0.018 14.6 0.3 0.15 11.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID32693.1 - 0.021 13.6 0.3 3.3 6.4 0.1 2.9 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA PF00004.29 AID32693.1 - 0.022 15.2 0.1 0.1 13.0 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 AID32693.1 - 0.025 14.5 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 AID32693.1 - 0.03 14.1 3.0 0.077 12.7 1.3 2.1 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.6 AID32693.1 - 0.035 14.3 0.2 0.19 11.9 0.2 2.0 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID32693.1 - 0.037 14.0 0.0 0.077 12.9 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ATPase PF06745.13 AID32693.1 - 0.059 12.7 0.1 9.2 5.5 0.0 2.2 2 0 0 2 2 2 0 KaiC DUF1627 PF07789.12 AID32693.1 - 0.095 12.4 0.0 0.79 9.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1627) Rad17 PF03215.15 AID32693.1 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain DUF3584 PF12128.8 AID32693.1 - 0.18 9.3 0.0 0.26 8.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ATP-synt_ab PF00006.25 AID32693.1 - 0.19 11.4 0.1 0.19 11.4 0.1 1.7 1 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 AID32693.1 - 0.19 11.4 0.1 0.42 10.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 AID32693.1 - 0.19 11.4 0.1 1 9.1 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Metallophos PF00149.28 AID32694.1 - 2.9e-14 54.1 0.1 5.4e-14 53.2 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID32694.1 - 2.7e-09 37.4 0.0 4.9e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain ABC_tran PF00005.27 AID32695.1 - 1.4e-32 113.1 0.0 2.1e-32 112.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32695.1 - 3.6e-13 49.5 0.1 1e-12 48.0 0.1 1.9 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID32695.1 - 2.3e-09 37.9 0.2 8.7e-09 36.1 0.2 2.1 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 AID32695.1 - 1.7e-07 31.4 0.1 0.01 15.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID32695.1 - 8e-05 22.9 0.0 0.00072 19.8 0.0 2.6 3 0 0 3 3 3 1 TOBE domain SMC_N PF02463.19 AID32695.1 - 9e-05 22.0 0.1 0.0016 17.9 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID32695.1 - 0.00028 20.8 0.0 0.00067 19.6 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID32695.1 - 0.00047 20.6 0.2 0.001 19.4 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID32695.1 - 0.00053 20.5 0.0 0.00089 19.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID32695.1 - 0.0016 18.2 0.0 0.0033 17.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID32695.1 - 0.0035 17.6 0.2 0.0074 16.6 0.2 1.7 1 1 0 1 1 1 1 AAA domain CysA_C_terminal PF17850.1 AID32695.1 - 0.0057 17.2 0.0 0.032 14.8 0.0 2.3 2 0 0 2 2 2 1 CysA C-terminal regulatory domain ATPase_2 PF01637.18 AID32695.1 - 0.0074 16.2 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 AID32695.1 - 0.01 15.7 0.0 0.017 15.1 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain NACHT PF05729.12 AID32695.1 - 0.014 15.3 0.2 0.04 13.8 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_28 PF13521.6 AID32695.1 - 0.017 15.3 0.2 0.053 13.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID32695.1 - 0.041 13.5 0.1 0.49 10.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID32695.1 - 0.044 14.3 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID32695.1 - 0.064 13.0 0.0 0.12 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain Capsid-VNN PF11729.8 AID32695.1 - 0.069 12.2 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 nodavirus capsid protein AAA PF00004.29 AID32695.1 - 0.078 13.4 0.0 0.3 11.5 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID32695.1 - 0.099 12.0 0.0 0.19 11.1 0.0 1.4 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 AID32695.1 - 0.11 12.5 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID32695.1 - 0.12 12.3 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 NTPase MMR_HSR1 PF01926.23 AID32695.1 - 0.13 12.3 0.0 0.34 11.0 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_5 PF07728.14 AID32695.1 - 0.14 12.2 0.0 0.48 10.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 AID32695.1 - 0.16 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Adeno_IVa2 PF02456.15 AID32695.1 - 0.16 10.7 0.0 0.24 10.1 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_33 PF13671.6 AID32695.1 - 0.17 12.1 0.4 0.47 10.6 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 AID32695.1 - 0.21 10.2 0.0 5.5 5.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 AID32696.1 - 1.1e-11 44.9 17.4 1.1e-11 44.9 17.4 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1634 PF07843.11 AID32696.1 - 0.023 14.8 1.8 0.035 14.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1634) DUF2383 PF09537.10 AID32696.1 - 0.076 13.4 0.0 0.19 12.1 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF2383) DUF2633 PF11119.8 AID32696.1 - 0.12 12.3 0.1 0.28 11.1 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) BPD_transp_1 PF00528.22 AID32697.1 - 5e-14 52.5 20.5 5e-14 52.5 20.5 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4492 PF14899.6 AID32697.1 - 0.0047 16.8 0.9 0.012 15.6 0.9 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4492) SBP_bac_8 PF13416.6 AID32698.1 - 1.7e-32 113.4 11.2 2.4e-32 112.9 11.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32698.1 - 1.9e-21 77.3 8.3 3.1e-21 76.7 8.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID32698.1 - 0.0073 15.8 0.1 0.19 11.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein DUF4148 PF13663.6 AID32698.1 - 0.065 13.4 0.0 5.1 7.3 0.0 3.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) Redoxin PF08534.10 AID32699.1 - 4.7e-18 65.3 0.0 6.3e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 AID32699.1 - 4e-14 52.6 0.0 5.7e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 AID32699.1 - 3.1e-10 40.2 0.0 5.1e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 AID32699.1 - 5.2e-07 29.6 0.1 8.5e-07 28.9 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 AID32699.1 - 0.0073 16.7 0.0 0.012 16.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain SCO1-SenC PF02630.14 AID32699.1 - 0.021 14.7 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 SCO1/SenC TraF PF13728.6 AID32699.1 - 0.062 13.1 0.0 0.089 12.6 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 AID32699.1 - 0.077 13.2 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like GSHPx PF00255.19 AID32699.1 - 0.23 11.1 0.0 0.34 10.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione peroxidase Lyase_1 PF00206.20 AID32700.1 - 1.2e-76 258.1 0.0 1.6e-76 257.7 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 AID32700.1 - 3e-24 85.5 0.1 7.5e-24 84.3 0.1 1.7 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal LPAM_2 PF13627.6 AID32701.1 - 0.001 18.8 1.1 0.0016 18.2 1.1 1.4 1 0 0 1 1 1 1 Prokaryotic lipoprotein-attachment site Orn_Arg_deC_N PF02784.16 AID32702.1 - 1.4e-60 204.7 0.0 1.8e-60 204.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 AID32702.1 - 1e-27 96.2 0.0 1.5e-27 95.7 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 AID32702.1 - 2.7e-10 40.3 0.2 6.3e-10 39.1 0.2 1.5 1 1 0 1 1 1 1 Alanine racemase, N-terminal domain HTH_20 PF12840.7 AID32703.1 - 3.6e-14 52.6 0.2 7.7e-14 51.5 0.2 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID32703.1 - 4.4e-07 29.7 0.1 1.2e-05 25.0 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 AID32703.1 - 4.6e-05 22.9 0.6 7.1e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID32703.1 - 0.0013 18.7 0.1 0.0036 17.3 0.0 1.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID32703.1 - 0.0051 16.7 0.1 0.0082 16.0 0.1 1.4 1 0 0 1 1 1 1 MarR family RP-C PF03428.13 AID32703.1 - 0.0053 16.4 0.0 0.0065 16.1 0.0 1.2 1 0 0 1 1 1 1 Replication protein C N-terminal domain HTH_34 PF13601.6 AID32703.1 - 0.0091 16.2 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 AID32703.1 - 0.015 15.0 0.9 0.092 12.6 0.9 2.1 1 1 0 1 1 1 0 IclR helix-turn-helix domain HTH_10 PF04967.12 AID32703.1 - 0.017 14.9 0.0 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_11 PF08279.12 AID32703.1 - 0.019 14.9 0.0 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 HTH domain MarR PF01047.22 AID32703.1 - 0.021 14.7 0.1 0.043 13.7 0.1 1.4 1 0 0 1 1 1 0 MarR family HTH_1 PF00126.27 AID32703.1 - 0.072 13.0 0.2 0.39 10.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_CodY PF08222.11 AID32703.1 - 0.074 12.6 0.0 0.2 11.2 0.0 1.7 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_27 PF13463.6 AID32703.1 - 0.079 13.5 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain PALP PF00291.25 AID32704.1 - 8e-67 225.7 2.3 9e-67 225.5 2.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4175 PF13779.6 AID32705.1 - 5.7e-299 993.8 33.7 6.5e-299 993.6 33.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) DUF5601 PF18151.1 AID32705.1 - 0.28 11.5 0.8 0.75 10.2 0.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) EzrA PF06160.12 AID32705.1 - 0.41 8.8 14.9 0.13 10.4 11.0 1.9 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA YtxH PF12732.7 AID32705.1 - 1 10.0 4.2 3.9 8.1 0.9 3.3 3 1 0 3 3 3 0 YtxH-like protein SMBP PF16785.5 AID32705.1 - 1.1 9.5 9.7 2.2 8.5 1.2 3.3 2 1 0 3 3 3 0 Small metal-binding protein DinB_2 PF12867.7 AID32705.1 - 1.4 9.4 12.3 26 5.3 0.2 4.6 3 1 0 3 3 3 0 DinB superfamily ATP-synt_DE PF00401.20 AID32705.1 - 3.1 8.1 26.7 0.048 13.9 7.4 4.2 5 0 0 5 5 5 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDT1_C PF16679.5 AID32705.1 - 5.8 7.4 7.0 10 6.6 0.1 3.6 2 1 1 3 3 3 0 DNA replication factor Cdt1 C-terminal domain DUF29 PF01724.16 AID32705.1 - 6.9 6.9 10.3 1 9.6 5.1 2.3 2 1 0 2 2 2 0 Domain of unknown function DUF29 Glyoxalase PF00903.25 AID32706.1 - 5e-05 23.5 0.3 0.00011 22.4 0.3 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID32706.1 - 0.015 16.1 0.0 0.019 15.8 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase-like domain LysR_substrate PF03466.20 AID32707.1 - 9.1e-27 93.8 0.1 1.2e-26 93.4 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32707.1 - 4.1e-23 81.1 0.9 9.2e-23 80.0 0.9 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family SBP_bac_11 PF13531.6 AID32707.1 - 0.0057 16.4 0.0 0.011 15.5 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein EamA PF00892.20 AID32708.1 - 3.6e-19 69.3 31.3 9.1e-12 45.3 14.1 2.3 2 1 0 2 2 2 2 EamA-like transporter family Response_reg PF00072.24 AID32709.1 - 1.3e-20 73.6 0.3 1.5e-20 73.4 0.3 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Pribosyltran PF00156.27 AID32710.1 - 9.4e-21 74.0 0.1 1.1e-20 73.8 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 AID32710.1 - 0.046 13.2 0.0 0.058 12.8 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF3426 PF11906.8 AID32711.1 - 0.12 12.6 0.0 0.67 10.1 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3426) Mago-bind PF09282.10 AID32712.1 - 0.029 14.2 0.2 0.048 13.5 0.2 1.3 1 0 0 1 1 1 0 Mago binding ABC_tran PF00005.27 AID32713.1 - 4.2e-31 108.3 0.0 5.2e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32713.1 - 1.5e-10 41.4 0.5 1.4e-06 28.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID32713.1 - 1.1e-06 29.2 0.0 1.6e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID32713.1 - 0.00095 19.4 0.0 0.0027 18.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 AID32713.1 - 0.0012 18.4 0.0 0.0032 17.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 AID32713.1 - 0.0085 15.2 0.0 0.013 14.5 0.0 1.5 1 1 1 2 2 2 1 Type II/IV secretion system protein AAA_29 PF13555.6 AID32713.1 - 0.01 15.6 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 AID32713.1 - 0.019 14.7 0.0 0.06 13.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID32713.1 - 0.02 14.8 0.0 0.041 13.8 0.0 1.5 2 0 0 2 2 1 0 RsgA GTPase AAA_33 PF13671.6 AID32713.1 - 0.021 15.0 0.2 0.068 13.3 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID32713.1 - 0.032 14.7 0.0 0.046 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID32713.1 - 0.033 13.5 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.29 AID32713.1 - 0.038 14.4 0.1 0.072 13.5 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID32713.1 - 0.061 12.7 0.0 8.6 5.7 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain cobW PF02492.19 AID32713.1 - 0.074 12.6 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 AID32713.1 - 0.096 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_15 PF13175.6 AID32713.1 - 0.097 12.4 0.0 2.1 8.0 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 AID32713.1 - 0.099 13.2 0.0 0.16 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID32713.1 - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 AID32713.1 - 0.18 11.7 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 AID32713.1 - 0.18 11.7 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 NTPase DUF218 PF02698.17 AID32715.1 - 1.6e-14 54.1 0.0 2.2e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 DUF218 domain Alkyl_sulf_dimr PF14863.6 AID32715.1 - 0.12 12.8 0.0 0.3 11.5 0.0 1.8 1 1 0 1 1 1 0 Alkyl sulfatase dimerisation DUF228 PF02989.14 AID32715.1 - 0.22 11.3 0.0 0.46 10.3 0.0 1.5 2 0 0 2 2 2 0 Lyme disease proteins of unknown function Putative_PNPOx PF01243.20 AID32716.1 - 6.9e-17 61.4 0.0 1.1e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1192 PF06698.11 AID32716.1 - 0.072 13.1 0.4 0.14 12.2 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) DUF1348 PF07080.11 AID32717.1 - 6.6e-60 200.7 6.0 7.4e-60 200.6 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1348) SnoaL_2 PF12680.7 AID32717.1 - 3.4e-08 34.1 2.0 4.3e-08 33.7 2.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 AID32717.1 - 0.00041 20.7 0.2 0.00051 20.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) LysR_substrate PF03466.20 AID32718.1 - 1.5e-40 138.8 2.3 2.2e-40 138.2 2.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32718.1 - 1.2e-09 37.9 0.3 2.7e-09 36.8 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Acyltransferase PF01553.21 AID32719.1 - 1.7e-20 73.0 0.0 2.3e-20 72.6 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase LysE PF01810.18 AID32720.1 - 3.6e-14 52.7 19.4 4.7e-14 52.3 19.4 1.1 1 0 0 1 1 1 1 LysE type translocator Aldo_ket_red PF00248.21 AID32721.1 - 3e-68 230.2 0.0 3.3e-68 230.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1205 PF06722.12 AID32721.1 - 0.14 12.2 0.1 0.47 10.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1205) ChaC PF04752.12 AID32722.1 - 8.8e-54 182.3 0.2 9.7e-54 182.1 0.2 1.0 1 0 0 1 1 1 1 ChaC-like protein AIG2_2 PF13772.6 AID32722.1 - 0.007 16.7 0.1 0.011 16.1 0.1 1.2 1 0 0 1 1 1 1 AIG2-like family DUF2125 PF09898.9 AID32723.1 - 2e-57 195.3 2.0 2.3e-57 195.1 2.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2125) DUF945 PF06097.11 AID32723.1 - 0.025 13.7 0.4 0.97 8.5 0.3 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF945) AsmA_2 PF13502.6 AID32723.1 - 0.035 13.6 0.1 0.53 9.8 0.0 2.2 1 1 1 2 2 2 0 AsmA-like C-terminal region PfkB PF00294.24 AID32724.1 - 4.9e-46 157.4 1.2 6.1e-46 157.1 1.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID32724.1 - 0.0012 18.2 0.1 0.002 17.5 0.1 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PDH PF02153.17 AID32725.1 - 4.1e-79 265.2 0.0 4.7e-79 265.0 0.0 1.0 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 AID32725.1 - 1.2e-10 41.8 0.1 4e-10 40.1 0.1 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 AID32725.1 - 3e-10 40.5 0.9 5.8e-10 39.6 0.9 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 AID32725.1 - 4.3e-08 32.9 0.1 6.7e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Rossmann-like PF10727.9 AID32725.1 - 1.4e-05 24.9 3.0 2.2e-05 24.3 3.0 1.3 1 0 0 1 1 1 1 Rossmann-like domain NAD_Gly3P_dh_N PF01210.23 AID32725.1 - 0.00026 21.0 0.2 0.06 13.3 0.0 2.4 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 AID32725.1 - 0.00043 19.7 0.2 0.0007 19.0 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 AID32725.1 - 0.0013 18.1 0.1 0.0022 17.3 0.1 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_3 PF03447.16 AID32725.1 - 0.0014 19.3 0.3 0.0028 18.3 0.3 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 AID32725.1 - 0.0016 18.9 0.3 0.0027 18.1 0.3 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 AID32725.1 - 0.0033 18.3 0.6 0.019 15.8 0.1 2.1 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ApbA PF02558.16 AID32725.1 - 0.0059 16.3 0.8 0.019 14.6 0.8 1.8 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 AID32725.1 - 0.0082 16.0 0.7 0.52 10.2 0.2 2.4 1 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain His_Phos_1 PF00300.22 AID32725.1 - 0.056 13.1 0.0 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 Histidine phosphatase superfamily (branch 1) Glyco_hydro_4 PF02056.16 AID32725.1 - 0.1 12.2 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase Shikimate_DH PF01488.20 AID32725.1 - 0.18 11.9 0.1 0.31 11.1 0.1 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.23 AID32725.1 - 0.22 11.6 2.7 1.7 8.7 0.7 2.9 1 1 1 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Aminotran_1_2 PF00155.21 AID32726.1 - 2e-44 152.2 0.0 2.3e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID32726.1 - 1.7e-07 30.9 0.1 3.4e-07 29.9 0.1 1.4 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AID32726.1 - 4.7e-07 29.1 0.0 7.3e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AID32726.1 - 4.8e-05 22.1 0.0 7.9e-05 21.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme BTRD1 PF17660.1 AID32726.1 - 0.0026 17.5 0.0 0.0061 16.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial tandem repeat domain 1 Abhydrolase_1 PF00561.20 AID32727.1 - 8.2e-28 97.7 0.0 1.1e-27 97.3 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID32727.1 - 0.0086 15.4 0.0 0.018 14.3 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID32727.1 - 0.032 13.7 0.0 2 7.9 0.0 2.3 2 0 0 2 2 2 0 Prolyl oligopeptidase family zf-RING_6 PF14835.6 AID32727.1 - 0.19 11.6 0.2 0.61 10.0 0.2 1.8 1 0 0 1 1 1 0 zf-RING of BARD1-type protein MetW PF07021.12 AID32728.1 - 7.5e-99 329.1 0.0 8.4e-99 328.9 0.0 1.0 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_23 PF13489.6 AID32728.1 - 7.1e-10 39.0 0.0 9.7e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32728.1 - 5.5e-08 33.3 0.0 8.8e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID32728.1 - 1.7e-06 28.6 0.0 2.9e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32728.1 - 2.9e-06 27.1 0.0 3.8e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32728.1 - 0.00061 20.5 0.1 0.0014 19.4 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain DUF1330 PF07045.11 AID32729.1 - 1.9e-29 101.8 0.0 2.2e-29 101.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) YCII PF03795.14 AID32729.1 - 0.058 13.8 0.0 0.074 13.5 0.0 1.3 1 0 0 1 1 1 0 YCII-related domain DUF1194 PF06707.11 AID32730.1 - 6.1e-79 264.0 0.0 7.3e-79 263.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1194) VWA_2 PF13519.6 AID32730.1 - 0.024 15.3 0.0 0.041 14.5 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain ABC_membrane_2 PF06472.15 AID32731.1 - 2.3e-41 142.0 0.7 2.9e-41 141.7 0.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 SbmA_BacA PF05992.12 AID32731.1 - 3.4e-26 92.4 3.8 4.5e-26 92.0 3.8 1.1 1 0 0 1 1 1 1 SbmA/BacA-like family ABC_tran PF00005.27 AID32731.1 - 5.9e-11 43.0 0.0 1.4e-10 41.9 0.0 1.6 1 1 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID32731.1 - 1.5e-05 24.8 2.5 9.6e-05 22.2 2.5 1.9 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_30 PF13604.6 AID32731.1 - 6.9e-05 22.6 0.0 0.00019 21.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AID32731.1 - 0.032 14.2 0.0 0.067 13.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 AID32731.1 - 0.088 13.1 0.1 0.54 10.5 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID32731.1 - 0.11 12.9 0.0 0.31 11.5 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 AID32731.1 - 0.12 12.3 0.0 1.3 9.0 0.0 2.1 2 0 0 2 2 2 0 NTPase TsaE PF02367.17 AID32731.1 - 0.14 12.1 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Methyltransf_11 PF08241.12 AID32732.1 - 2.5e-08 34.5 0.0 8.7e-08 32.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32732.1 - 3.4e-08 33.5 0.0 4.7e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32732.1 - 0.0053 16.6 0.0 0.0077 16.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Transglut_core2 PF13369.6 AID32732.1 - 0.0095 15.5 0.0 0.096 12.3 0.0 2.2 1 1 1 2 2 2 1 Transglutaminase-like superfamily Methyltransf_25 PF13649.6 AID32732.1 - 0.0099 16.6 0.0 0.045 14.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID32732.1 - 0.024 13.9 0.0 0.039 13.3 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 AID32732.1 - 0.039 14.7 0.0 0.066 14.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain HAGH_C PF16123.5 AID32733.1 - 9.5e-29 99.7 0.0 1.5e-28 99.2 0.0 1.3 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 AID32733.1 - 9e-16 58.5 1.9 3.9e-15 56.4 1.9 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID32733.1 - 0.069 12.7 0.6 0.13 11.7 0.6 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Cupin_5 PF06172.11 AID32734.1 - 7.4e-48 162.3 0.1 8.5e-48 162.1 0.1 1.0 1 0 0 1 1 1 1 Cupin superfamily (DUF985) YhhN PF07947.14 AID32735.1 - 7.4e-39 133.3 25.0 7.4e-39 133.3 25.0 1.4 2 0 0 2 2 2 1 YhhN family EamA PF00892.20 AID32736.1 - 4.5e-23 81.9 34.3 1.2e-15 57.8 12.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family RseC_MucC PF04246.12 AID32736.1 - 0.019 14.9 1.2 0.019 14.9 1.2 3.0 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC DUF3108 PF11306.8 AID32737.1 - 3.8e-28 99.0 0.0 4.6e-28 98.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3108) Ribosomal_L28 PF00830.19 AID32738.1 - 9.8e-24 83.3 1.3 1.3e-23 82.9 1.3 1.2 1 0 0 1 1 1 1 Ribosomal L28 family Vut_1 PF02592.15 AID32739.1 - 2.4e-34 118.8 6.7 3.9e-34 118.1 6.7 1.3 1 0 0 1 1 1 1 Putative vitamin uptake transporter Spermine_synth PF01564.17 AID32740.1 - 0.014 14.8 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Spermine/spermidine synthase domain AHSA1 PF08327.11 AID32741.1 - 3.6e-23 82.1 0.0 4.5e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID32741.1 - 2.3e-08 34.4 0.1 3.2e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2505 PF10698.9 AID32741.1 - 0.00013 22.2 0.1 0.57 10.3 0.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF2505) HTH_20 PF12840.7 AID32742.1 - 1.3e-13 50.8 0.3 2.2e-13 50.0 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID32742.1 - 2.2e-13 49.8 0.0 6.3e-13 48.4 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family DprA_WH PF17782.1 AID32742.1 - 3.2e-07 30.4 0.3 8.1e-07 29.1 0.3 1.7 1 0 0 1 1 1 1 DprA winged helix domain MarR_2 PF12802.7 AID32742.1 - 8.2e-07 28.8 0.4 1.6e-06 27.9 0.2 1.6 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 AID32742.1 - 9.8e-06 25.3 0.2 0.00015 21.5 0.1 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID32742.1 - 7.2e-05 22.3 0.0 0.00016 21.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID32742.1 - 9.5e-05 22.3 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 AID32742.1 - 0.0034 17.2 0.0 0.013 15.3 0.0 1.9 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB ArsR PF09824.9 AID32742.1 - 0.0055 16.3 0.0 0.01 15.5 0.0 1.4 2 0 0 2 2 2 1 ArsR transcriptional regulator LexA_DNA_bind PF01726.16 AID32742.1 - 0.0084 15.9 0.1 0.1 12.4 0.0 2.4 2 1 0 2 2 2 1 LexA DNA binding domain MarR PF01047.22 AID32742.1 - 0.021 14.7 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_CodY PF08222.11 AID32742.1 - 0.053 13.1 0.0 0.087 12.4 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_45 PF14947.6 AID32742.1 - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix Cdc6_C PF09079.11 AID32742.1 - 0.11 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain DUF1627 PF07789.12 AID32742.1 - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1627) Phytase-like PF13449.6 AID32743.1 - 1e-37 130.6 0.6 1.3e-37 130.3 0.6 1.1 1 0 0 1 1 1 1 Esterase-like activity of phytase SdiA-regulated PF06977.11 AID32743.1 - 0.021 14.1 0.0 0.034 13.4 0.0 1.3 1 0 0 1 1 1 0 SdiA-regulated CobT_C PF11775.8 AID32744.1 - 1.8e-113 377.6 0.0 3.1e-113 376.8 0.0 1.4 1 0 0 1 1 1 1 Cobalamin biosynthesis protein CobT VWA domain CobT PF06213.12 AID32744.1 - 3.4e-97 325.1 24.8 5.4e-97 324.5 24.8 1.2 1 0 0 1 1 1 1 Cobalamin biosynthesis protein CobT VWA PF00092.28 AID32744.1 - 0.0035 17.6 0.0 0.065 13.5 0.0 2.4 1 1 0 1 1 1 1 von Willebrand factor type A domain BUD22 PF09073.10 AID32744.1 - 0.0047 16.3 14.9 0.0061 16.0 14.9 1.2 1 0 0 1 1 1 1 BUD22 Paf1 PF03985.13 AID32744.1 - 0.0098 14.9 10.3 0.014 14.4 10.3 1.1 1 0 0 1 1 1 1 Paf1 VWA_2 PF13519.6 AID32744.1 - 0.01 16.5 0.0 1.5 9.5 0.0 3.7 4 0 0 4 4 4 1 von Willebrand factor type A domain DDHD PF02862.17 AID32744.1 - 0.056 13.6 0.7 0.081 13.1 0.7 1.3 1 0 0 1 1 1 0 DDHD domain SDA1 PF05285.12 AID32744.1 - 0.11 11.9 17.6 0.17 11.3 17.6 1.2 1 0 0 1 1 1 0 SDA1 CDC45 PF02724.14 AID32744.1 - 0.29 9.4 14.2 0.41 8.9 14.2 1.2 1 0 0 1 1 1 0 CDC45-like protein CCDC53 PF10152.9 AID32744.1 - 8.4 6.8 9.1 15 5.9 9.1 1.4 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Raftlin PF15250.6 AID32744.1 - 8.4 5.0 8.2 18 3.9 8.2 1.5 2 0 0 2 2 2 0 Raftlin CobS_N PF12556.8 AID32745.1 - 1.3e-15 56.8 0.6 2.5e-15 55.9 0.6 1.5 1 0 0 1 1 1 1 Cobaltochelatase CobS subunit N terminal AAA_5 PF07728.14 AID32745.1 - 6.9e-10 39.1 0.0 1.2e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbbQ_C PF08406.10 AID32745.1 - 0.00011 22.3 0.0 0.0002 21.6 0.0 1.4 1 0 0 1 1 1 1 CbbQ/NirQ/NorQ C-terminal AAA PF00004.29 AID32745.1 - 0.00086 19.7 0.0 0.0033 17.8 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID32745.1 - 0.0012 19.0 0.0 0.002 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID32745.1 - 0.0063 17.1 0.0 0.011 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_3 PF07726.11 AID32745.1 - 0.018 14.9 0.0 0.048 13.5 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID32745.1 - 0.023 15.1 0.0 0.043 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 AID32745.1 - 0.03 14.6 0.0 0.049 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID32745.1 - 0.091 12.3 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 AID32745.1 - 0.19 11.8 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain DnaJ PF00226.31 AID32746.1 - 6e-13 48.7 0.0 1.1e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain BolA PF01722.18 AID32747.1 - 1.2e-30 105.6 0.9 1.5e-30 105.2 0.9 1.2 1 0 0 1 1 1 1 BolA-like protein TPP_enzyme_N PF02776.18 AID32748.1 - 9.4e-34 116.5 1.1 2.2e-33 115.3 0.4 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID32748.1 - 2.3e-25 89.1 0.2 1e-24 87.1 0.1 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COesterase PF00135.28 AID32748.1 - 5.1e-11 42.1 0.1 9.9e-11 41.2 0.1 1.3 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 AID32748.1 - 8.8e-11 42.1 1.0 8.8e-11 42.1 1.0 1.7 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID32748.1 - 0.0027 18.3 24.1 0.0039 17.8 11.9 2.8 1 1 1 2 2 2 1 Alpha/beta hydrolase family DUF1749 PF08538.10 AID32748.1 - 0.16 11.1 0.1 0.9 8.6 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1749) Sulfotransfer_1 PF00685.27 AID32749.1 - 0.044 13.3 0.0 0.064 12.7 0.0 1.4 1 0 0 1 1 1 0 Sulfotransferase domain CorC_HlyC PF03471.17 AID32750.1 - 6.2e-22 77.4 0.6 4.4e-21 74.7 0.0 2.3 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 AID32750.1 - 4.1e-12 46.4 0.8 1.5e-07 31.8 0.0 2.7 3 0 0 3 3 3 2 CBS domain DHQ_synthase PF01761.20 AID32751.1 - 3.2e-96 321.5 0.0 3.9e-96 321.3 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 AID32751.1 - 1.3e-14 54.5 0.1 1.9e-13 50.7 0.1 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 AID32751.1 - 3.2e-12 45.9 1.8 5e-11 42.0 0.3 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase SKI PF01202.22 AID32752.1 - 4e-47 160.3 0.0 4.9e-47 160.0 0.0 1.1 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 AID32752.1 - 1.7e-05 25.0 0.0 3.4e-05 24.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 AID32752.1 - 0.00015 21.9 0.0 0.0063 16.7 0.0 2.3 1 1 1 2 2 2 1 Cytidylate kinase-like family AAA_18 PF13238.6 AID32752.1 - 0.00064 20.3 0.0 0.0016 19.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain TsaE PF02367.17 AID32752.1 - 0.01 15.8 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 AID32752.1 - 0.013 15.9 0.0 0.028 14.9 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID32752.1 - 0.057 12.8 0.0 0.087 12.2 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MtrF PF09472.10 AID32753.1 - 0.12 11.8 1.1 0.17 11.3 1.1 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Phage_integrase PF00589.22 AID32754.1 - 7.7e-40 136.5 0.0 2.7e-39 134.7 0.0 1.7 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AID32754.1 - 2.7e-18 66.0 0.5 7.1e-17 61.5 0.0 2.8 2 1 1 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 AID32754.1 - 1.4e-06 28.7 0.0 7.1e-06 26.4 0.0 2.1 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain POTRA_TamA_1 PF17243.2 AID32754.1 - 0.17 12.0 0.1 5.7 7.1 0.0 2.4 1 1 1 2 2 2 0 POTRA domain TamA domain 1 ACCA PF03255.14 AID32755.1 - 1.1e-58 197.1 0.0 1.7e-58 196.6 0.0 1.3 1 0 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Carboxyl_trans PF01039.22 AID32755.1 - 3.6e-22 78.7 0.6 4.5e-22 78.3 0.6 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain YkuD PF03734.14 AID32756.1 - 0.0011 19.4 0.3 0.0024 18.3 0.2 1.6 1 1 0 1 1 1 1 L,D-transpeptidase catalytic domain CCDC53 PF10152.9 AID32756.1 - 5.6 7.4 15.6 57 4.1 0.0 2.5 2 0 0 2 2 2 0 Subunit CCDC53 of WASH complex TusA PF01206.17 AID32757.1 - 5.6e-20 70.9 0.0 6.3e-20 70.8 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA cobW PF02492.19 AID32758.1 - 3.5e-51 173.3 0.4 4.4e-51 173.0 0.4 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 AID32758.1 - 3.2e-16 59.0 0.0 5.5e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 AID32758.1 - 1.7e-05 24.8 0.0 0.16 11.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 AID32758.1 - 0.0032 17.0 1.7 1.8 8.1 1.2 2.3 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 AID32758.1 - 0.0097 16.0 0.1 0.058 13.5 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRP54 PF00448.22 AID32758.1 - 0.011 15.4 2.6 0.063 12.9 2.6 1.9 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain DUF2796 PF10986.8 AID32758.1 - 0.028 14.4 8.9 0.042 13.8 8.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) AAA_33 PF13671.6 AID32758.1 - 0.03 14.5 0.1 0.075 13.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID32758.1 - 0.037 14.3 0.2 0.078 13.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 AID32758.1 - 0.046 14.0 0.0 0.13 12.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID32758.1 - 0.05 14.0 0.1 0.24 11.8 0.1 2.2 1 1 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 AID32758.1 - 0.066 13.2 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Peptidase_S11 PF00768.20 AID32759.1 - 1.2e-47 162.4 0.0 1.6e-47 162.0 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 AID32759.1 - 8.2e-12 45.1 0.0 1.2e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 AID32759.1 - 0.0012 17.6 0.1 0.14 10.9 0.0 2.1 2 0 0 2 2 2 2 D-Ala-D-Ala carboxypeptidase 3 (S13) family Peptidase_M20 PF01546.28 AID32760.1 - 5e-39 134.1 1.8 7e-39 133.7 1.8 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID32760.1 - 7.7e-12 45.1 0.2 1.8e-11 43.9 0.2 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Ni_hydr_CYTB PF01292.20 AID32761.1 - 8.9e-16 58.0 24.2 1.2e-15 57.6 24.2 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF2231 PF09990.9 AID32761.1 - 0.11 12.9 12.9 0.066 13.7 7.5 2.7 2 1 0 2 2 2 0 Predicted membrane protein (DUF2231) PRD1_DD PF11087.8 AID32761.1 - 0.3 10.8 2.3 11 5.8 0.1 3.0 3 0 0 3 3 3 0 PRD1 phage membrane DNA delivery DUF4405 PF14358.6 AID32761.1 - 1.4 9.5 17.6 0.33 11.5 7.1 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF4405) SNARE_assoc PF09335.11 AID32762.1 - 3.4e-13 50.1 4.8 5.4e-13 49.5 4.8 1.4 1 1 0 1 1 1 1 SNARE associated Golgi protein DUF4112 PF13430.6 AID32762.1 - 0.042 14.1 0.2 0.086 13.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4112) Cu-oxidase_2 PF07731.14 AID32763.1 - 8.5e-34 116.2 2.7 2.3e-30 105.1 0.8 3.0 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase_3 PF07732.15 AID32763.1 - 1.7e-31 108.7 0.4 2.8e-29 101.6 0.0 3.0 2 1 0 2 2 2 1 Multicopper oxidase Cu-oxidase PF00394.22 AID32763.1 - 3.1e-13 50.2 0.0 1.4e-09 38.3 0.0 2.8 3 0 0 3 3 3 2 Multicopper oxidase Copper-bind PF00127.20 AID32763.1 - 0.0017 18.7 0.2 0.043 14.3 0.0 2.3 2 0 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family ABC_tran PF00005.27 AID32764.1 - 2.1e-32 112.5 0.0 3.6e-32 111.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32764.1 - 3e-13 49.7 0.3 1.1e-12 48.0 0.3 2.1 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID32764.1 - 2e-07 31.2 0.4 0.0037 17.1 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID32764.1 - 1.3e-06 28.6 2.9 2.1e-05 24.7 0.1 3.6 4 1 1 5 5 4 1 TOBE domain OB_MalK PF17912.1 AID32764.1 - 1.9e-06 28.6 0.2 1.6e-05 25.6 0.2 2.7 1 1 0 1 1 1 1 MalK OB fold domain AAA_16 PF13191.6 AID32764.1 - 0.00025 21.5 0.6 0.00072 20.0 0.6 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID32764.1 - 0.00038 21.0 0.0 0.00066 20.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID32764.1 - 0.00088 19.4 0.8 0.018 15.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 AID32764.1 - 0.0023 17.9 0.2 0.0054 16.7 0.1 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 AID32764.1 - 0.0036 17.0 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 AID32764.1 - 0.0057 16.6 0.5 0.038 13.9 0.1 2.1 2 0 0 2 2 2 1 NACHT domain AAA PF00004.29 AID32764.1 - 0.01 16.2 0.1 0.037 14.5 0.0 1.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 AID32764.1 - 0.018 15.5 0.0 0.039 14.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID32764.1 - 0.021 15.0 1.6 0.067 13.4 0.0 2.4 3 0 0 3 3 2 0 AAA domain AAA_22 PF13401.6 AID32764.1 - 0.031 14.6 0.0 0.078 13.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID32764.1 - 0.036 13.8 0.0 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 AID32764.1 - 0.039 13.7 0.0 0.096 12.4 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation PhoH PF02562.16 AID32764.1 - 0.054 12.9 0.1 0.77 9.2 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein ATPase_2 PF01637.18 AID32764.1 - 0.063 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea OapA PF04225.12 AID32764.1 - 0.11 12.6 0.0 0.53 10.4 0.0 2.2 1 1 0 1 1 1 0 Opacity-associated protein A LysM-like domain cobW PF02492.19 AID32764.1 - 0.12 11.9 0.2 0.23 11.0 0.2 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_15 PF13175.6 AID32764.1 - 0.12 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MIT_C PF16565.5 AID32764.1 - 0.16 11.9 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT BPD_transp_1 PF00528.22 AID32765.1 - 2.5e-11 43.7 16.8 2.5e-11 43.7 16.8 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32766.1 - 2.2e-12 47.1 18.7 2.2e-12 47.1 18.7 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 AID32767.1 - 2e-28 100.0 5.3 3.1e-28 99.4 5.3 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32767.1 - 3.9e-20 73.0 3.4 6.4e-20 72.3 3.4 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF3502 PF12010.8 AID32767.1 - 0.036 14.7 0.1 0.17 12.5 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3502) Alpha-L-AF_C PF06964.12 AID32768.1 - 7.7e-43 146.5 0.0 1.3e-42 145.7 0.0 1.4 1 0 0 1 1 1 1 Alpha-L-arabinofuranosidase C-terminal domain GH-E PF14410.6 AID32768.1 - 0.3 11.5 2.6 1 9.8 0.1 2.4 2 0 0 2 2 2 0 HNH/ENDO VII superfamily nuclease with conserved GHE residues HTH_20 PF12840.7 AID32769.1 - 7.1e-13 48.4 0.0 1.3e-12 47.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID32769.1 - 1.6e-09 37.4 0.1 4.8e-09 35.9 0.0 1.9 1 1 1 2 2 2 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID32769.1 - 1.3e-07 31.3 0.1 3.2e-07 30.1 0.1 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID32769.1 - 6.2e-07 29.2 0.0 1.1e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 AID32769.1 - 2.8e-06 27.0 0.0 6.1e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID32769.1 - 3.1e-06 26.7 0.1 5.4e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID32769.1 - 0.00039 20.3 0.0 0.0008 19.3 0.0 1.5 1 0 0 1 1 1 1 MarR family Dimerisation2 PF16864.5 AID32769.1 - 0.0004 20.3 0.0 0.00083 19.3 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain HTH_27 PF13463.6 AID32769.1 - 0.0042 17.6 0.1 0.016 15.6 0.0 1.9 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_1 PF00126.27 AID32769.1 - 0.0061 16.5 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF2250 PF10007.9 AID32769.1 - 0.01 15.9 0.0 0.018 15.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_AsnC-type PF13404.6 AID32769.1 - 0.011 15.5 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_38 PF13936.6 AID32769.1 - 0.013 15.2 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4423 PF14394.6 AID32769.1 - 0.027 14.2 0.0 0.059 13.1 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) DUF742 PF05331.11 AID32769.1 - 0.029 14.2 0.1 0.05 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF742) Penicillinase_R PF03965.16 AID32769.1 - 0.034 14.5 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor Fe_dep_repress PF01325.19 AID32769.1 - 0.034 14.3 0.0 0.074 13.3 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain RP-C PF03428.13 AID32769.1 - 0.063 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain DprA_WH PF17782.1 AID32769.1 - 0.087 12.9 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 DprA winged helix domain TFIIE_alpha PF02002.17 AID32769.1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit Cupin_3 PF05899.12 AID32770.1 - 1.4e-23 82.4 0.7 2.1e-23 81.8 0.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID32770.1 - 6.6e-05 22.5 1.3 0.00014 21.5 0.4 1.9 1 1 1 2 2 2 1 Cupin domain Cupin_6 PF12852.7 AID32770.1 - 0.002 17.9 0.1 0.0096 15.7 0.0 1.8 1 1 1 2 2 2 1 Cupin AP_endonuc_2 PF01261.24 AID32771.1 - 9.7e-26 90.5 0.3 1.4e-25 90.0 0.3 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID32771.1 - 0.061 13.0 0.0 0.17 11.6 0.0 1.8 1 0 0 1 1 1 0 AP endonuclease family 2 C terminus Peripla_BP_4 PF13407.6 AID32772.1 - 2e-51 175.0 9.8 2.8e-51 174.6 9.8 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID32772.1 - 3.9e-15 56.0 0.4 5.2e-15 55.6 0.4 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID32772.1 - 0.00016 22.1 0.2 0.00051 20.4 0.0 1.8 2 1 0 2 2 2 1 Periplasmic binding protein-like domain Bmp PF02608.14 AID32772.1 - 0.0057 15.7 3.2 0.085 11.8 1.8 2.1 2 0 0 2 2 2 2 ABC transporter substrate-binding protein PnrA-like QRPTase_C PF01729.19 AID32772.1 - 0.0092 15.8 0.3 0.015 15.1 0.3 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain BPD_transp_2 PF02653.16 AID32773.1 - 1e-46 159.3 45.1 1e-46 159.3 45.1 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF681 PF05080.12 AID32773.1 - 0.11 13.2 1.9 0.97 10.1 0.4 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF681) ABC_tran PF00005.27 AID32774.1 - 3.5e-60 202.4 0.0 7.7e-33 113.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID32774.1 - 8e-13 48.9 1.7 0.00056 19.8 0.0 3.2 2 1 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32774.1 - 0.00028 20.4 1.2 0.0095 15.4 0.2 3.0 2 2 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32774.1 - 0.0012 18.6 0.1 0.009 15.7 0.0 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID32774.1 - 0.0013 19.1 2.0 0.39 11.1 0.1 2.6 2 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 AID32774.1 - 0.0022 17.9 0.7 0.019 14.9 0.0 2.5 3 0 0 3 3 3 1 RsgA GTPase TsaE PF02367.17 AID32774.1 - 0.0063 16.5 0.2 2.8 8.0 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 AID32774.1 - 0.0082 16.4 0.9 2.7 8.3 0.0 3.3 4 0 0 4 4 4 1 AAA domain AAA PF00004.29 AID32774.1 - 0.015 15.7 2.0 8.4 6.8 0.1 3.7 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 AID32774.1 - 0.021 14.4 0.1 0.047 13.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID32774.1 - 0.021 14.5 0.3 0.021 14.5 0.3 2.7 3 1 0 3 3 3 0 AAA domain AAA_25 PF13481.6 AID32774.1 - 0.03 13.9 0.9 0.52 9.8 0.0 2.9 3 0 0 3 3 3 0 AAA domain AAA_23 PF13476.6 AID32774.1 - 0.035 14.6 0.0 0.063 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID32774.1 - 0.054 13.6 0.2 0.22 11.6 0.0 2.1 3 0 0 3 3 3 0 50S ribosome-binding GTPase ACT_7 PF13840.6 AID32774.1 - 0.12 12.2 0.2 12 5.8 0.0 2.5 2 0 0 2 2 2 0 ACT domain AAA_15 PF13175.6 AID32774.1 - 0.13 12.0 0.0 0.26 11.0 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain FGGY_N PF00370.21 AID32775.1 - 1.8e-07 31.0 0.0 2.6e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain DeoRC PF00455.22 AID32776.1 - 6e-33 114.0 0.0 7.8e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID32776.1 - 5.1e-16 58.2 0.2 5.3e-15 54.9 0.3 2.5 3 0 0 3 3 3 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID32776.1 - 1.6e-10 40.8 0.1 3.6e-10 39.6 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 AID32776.1 - 1.5e-05 24.4 0.1 4.2e-05 23.0 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID32776.1 - 0.00025 20.9 0.2 0.00062 19.6 0.2 1.6 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 AID32776.1 - 0.00038 20.2 1.1 0.0011 18.8 1.1 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_5 PF01022.20 AID32776.1 - 0.001 18.9 0.0 0.0024 17.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Tnp_Tc3_2 PF01498.18 AID32776.1 - 0.0013 19.0 0.1 0.0027 17.9 0.1 1.5 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 AID32776.1 - 0.0024 17.3 0.1 0.005 16.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 AID32776.1 - 0.0067 16.2 0.3 0.018 14.8 0.3 1.7 1 0 0 1 1 1 1 Homeodomain-like domain Fe_dep_repress PF01325.19 AID32776.1 - 0.0075 16.5 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_32 PF13565.6 AID32776.1 - 0.014 16.0 0.3 0.059 14.0 0.1 2.0 2 0 0 2 2 2 0 Homeodomain-like domain Put_DNA-bind_N PF06971.13 AID32776.1 - 0.017 15.2 0.1 0.035 14.1 0.1 1.5 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus GntR PF00392.21 AID32776.1 - 0.019 14.6 0.2 0.068 12.8 0.2 1.9 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family AbiEi_4 PF13338.6 AID32776.1 - 0.028 14.6 1.1 0.15 12.2 0.4 2.3 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin HTH_Mga PF08280.11 AID32776.1 - 0.035 14.1 0.0 0.057 13.5 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain MarR PF01047.22 AID32776.1 - 0.04 13.9 0.0 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_28 PF13518.6 AID32776.1 - 0.053 13.7 0.3 0.11 12.6 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID32776.1 - 0.065 13.1 0.1 0.15 11.9 0.1 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 AID32776.1 - 0.11 12.4 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID32776.1 - 0.14 11.7 0.9 0.31 10.6 0.9 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Aldolase_II PF00596.21 AID32777.1 - 4.4e-19 69.2 0.1 8.5e-19 68.2 0.1 1.4 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain FGGY_N PF00370.21 AID32778.1 - 1.7e-19 70.3 0.0 8.5e-09 35.3 0.0 2.1 2 0 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 AID32778.1 - 5.5e-05 23.0 0.1 0.00012 21.9 0.1 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Hydrolase_6 PF13344.6 AID32779.1 - 4.1e-15 55.7 0.0 1e-14 54.5 0.0 1.8 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID32779.1 - 4.5e-12 45.8 0.1 9.8e-12 44.8 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 AID32779.1 - 5.3e-08 33.4 0.0 0.0018 18.6 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 AID32779.1 - 0.00046 20.3 0.0 0.046 13.8 0.0 2.1 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Sugar-bind PF04198.13 AID32780.1 - 2.8e-73 246.2 0.0 3.8e-73 245.8 0.0 1.2 1 0 0 1 1 1 1 Putative sugar-binding domain HTH_Crp_2 PF13545.6 AID32780.1 - 0.00048 20.0 0.2 0.0011 18.9 0.2 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 AID32780.1 - 0.00088 18.7 0.0 0.0018 17.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 AID32780.1 - 0.0011 18.7 0.3 0.0024 17.6 0.3 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Crp PF00325.20 AID32780.1 - 0.0075 15.9 0.1 0.017 14.8 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family Sigma70_r4_2 PF08281.12 AID32780.1 - 0.0087 15.7 0.0 0.026 14.2 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Trp_repressor PF01371.19 AID32780.1 - 0.031 14.4 0.7 0.093 12.9 0.7 1.8 1 0 0 1 1 1 0 Trp repressor protein HTH_17 PF12728.7 AID32780.1 - 0.081 13.1 0.0 0.19 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID32780.1 - 0.092 12.7 0.2 0.19 11.7 0.2 1.5 1 0 0 1 1 1 0 HTH domain DUF134 PF02001.16 AID32780.1 - 0.099 13.2 0.1 0.22 12.1 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF134 HTH_3 PF01381.22 AID32780.1 - 0.11 12.6 0.0 0.34 11.0 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix PEP-utilizers_C PF02896.18 AID32782.1 - 9.8e-102 340.0 0.4 1.7e-101 339.2 0.4 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS-HPr PF00381.19 AID32782.1 - 2.7e-22 78.8 0.8 2.7e-22 78.8 0.8 2.0 2 0 0 2 2 2 1 PTS HPr component phosphorylation site PEP-utilisers_N PF05524.13 AID32782.1 - 1.5e-21 76.7 5.9 4.7e-21 75.1 5.9 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 AID32782.1 - 3.6e-17 61.9 1.3 1.3e-16 60.1 1.3 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PTSIIA_gutA PF03829.13 AID32783.1 - 1.7e-27 95.5 0.0 1.9e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 PTS system glucitol/sorbitol-specific IIA component EIIBC-GUT_N PF03612.14 AID32784.1 - 2.1e-67 226.5 0.3 3.2e-67 225.8 0.3 1.3 1 0 0 1 1 1 1 Sorbitol phosphotransferase enzyme II N-terminus EIIBC-GUT_C PF07663.11 AID32784.1 - 2.8e-42 142.8 7.6 2.8e-42 142.8 7.6 2.5 2 1 0 3 3 3 1 Sorbitol phosphotransferase enzyme II C-terminus EII-GUT PF03608.13 AID32785.1 - 1.9e-66 223.1 5.3 2.4e-66 222.8 5.3 1.1 1 0 0 1 1 1 1 PTS system enzyme II sorbitol-specific factor GutM PF06923.11 AID32786.1 - 2.6e-24 85.4 0.0 3.1e-24 85.1 0.0 1.1 1 0 0 1 1 1 1 Glucitol operon activator protein (GutM) HTH_Tnp_4 PF13613.6 AID32787.1 - 0.11 12.3 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HAD_2 PF13419.6 AID32788.1 - 2.9e-26 92.6 0.0 3.4e-26 92.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID32788.1 - 2e-11 44.6 0.0 2.8e-09 37.6 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID32788.1 - 7.6e-11 41.9 0.2 1.5e-10 41.0 0.2 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 AID32788.1 - 0.045 14.2 0.0 0.066 13.6 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DHHA1 PF02272.19 AID32788.1 - 0.09 13.2 0.1 19 5.7 0.0 2.2 2 0 0 2 2 2 0 DHHA1 domain DUF930 PF06059.12 AID32789.1 - 1.1e-21 77.2 0.0 2.5e-21 76.1 0.0 1.6 2 0 0 2 2 2 1 Domain of Unknown Function (DUF930) HAD_2 PF13419.6 AID32790.1 - 0.091 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF930 PF06059.12 AID32791.1 - 1.1e-22 80.4 0.0 2.5e-22 79.3 0.0 1.6 1 0 0 1 1 1 1 Domain of Unknown Function (DUF930) SurE PF01975.17 AID32792.1 - 1.1e-41 142.7 0.0 1.4e-41 142.4 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE Lactamase_B PF00753.27 AID32793.1 - 1.1e-09 38.6 0.9 2.2e-09 37.6 0.9 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID32793.1 - 1.3e-09 37.9 0.1 2.4e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 AID32793.1 - 1.3e-05 24.7 0.0 0.0085 15.5 0.0 2.2 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 AID32793.1 - 0.012 15.6 0.0 0.018 14.9 0.0 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain ABC_tran PF00005.27 AID32794.1 - 1.3e-32 113.2 0.0 1.8e-32 112.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32794.1 - 8.5e-07 29.1 0.1 0.0074 16.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32794.1 - 2.7e-05 23.7 0.0 4.1e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_2 PF08402.10 AID32794.1 - 0.0011 19.1 0.0 0.0067 16.6 0.0 2.3 1 1 1 2 2 2 1 TOBE domain AAA_16 PF13191.6 AID32794.1 - 0.0017 18.8 0.3 0.0031 17.9 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID32794.1 - 0.0034 17.3 0.0 0.0072 16.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID32794.1 - 0.0042 17.3 0.2 0.0087 16.3 0.2 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID32794.1 - 0.007 16.5 0.0 0.02 15.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID32794.1 - 0.0074 16.7 0.1 0.013 16.0 0.1 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID32794.1 - 0.018 15.5 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID32794.1 - 0.021 14.5 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 AID32794.1 - 0.039 13.9 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 AID32794.1 - 0.053 13.8 0.4 0.42 10.8 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID32794.1 - 0.082 12.6 0.0 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 AID32794.1 - 0.11 12.4 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 AID32794.1 - 0.19 10.9 0.0 0.32 10.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase_2 PF01637.18 AID32794.1 - 0.21 11.5 0.0 0.34 10.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea BPD_transp_1 PF00528.22 AID32795.1 - 9.2e-25 87.4 51.8 5.8e-15 55.5 19.4 4.0 2 1 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 AID32796.1 - 1e-29 103.7 0.4 1.6e-29 103.1 0.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32796.1 - 7.7e-27 95.1 9.2 1e-26 94.6 9.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32796.1 - 2.2e-24 86.8 3.8 2.5e-24 86.6 3.0 1.5 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32796.1 - 8.6e-24 84.6 1.2 1.1e-23 84.3 1.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PhrC_PhrF PF11131.8 AID32796.1 - 0.0044 16.6 1.6 0.0093 15.5 1.6 1.5 1 0 0 1 1 1 1 Rap-phr extracellular signalling PBP_like_2 PF12849.7 AID32796.1 - 0.0052 16.5 0.4 2.4 7.8 0.1 2.9 2 1 1 3 3 3 1 PBP superfamily domain Sugar-bind PF04198.13 AID32798.1 - 3.4e-27 95.2 0.0 5.2e-27 94.6 0.0 1.2 1 0 0 1 1 1 1 Putative sugar-binding domain Sigma70_r4_2 PF08281.12 AID32798.1 - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 AID32798.1 - 0.00026 20.7 0.4 0.00061 19.5 0.0 1.8 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4 PF04545.16 AID32798.1 - 0.00026 20.4 0.0 0.00058 19.3 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 AID32798.1 - 0.0009 19.1 0.2 0.0064 16.4 0.0 2.4 3 0 0 3 3 3 1 MarR family HTH_Crp_2 PF13545.6 AID32798.1 - 0.0025 17.7 0.0 0.0059 16.6 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 AID32798.1 - 0.0034 17.4 0.0 0.0068 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_11 PF08279.12 AID32798.1 - 0.016 15.2 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 HTH domain Phage_antitermQ PF06530.12 AID32798.1 - 0.038 13.9 0.0 0.064 13.2 0.0 1.3 1 0 0 1 1 1 0 Phage antitermination protein Q GntR PF00392.21 AID32798.1 - 0.085 12.5 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID32798.1 - 0.21 11.2 0.0 0.37 10.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sugar-bind PF04198.13 AID32799.1 - 2.7e-26 92.3 0.8 2.8e-26 92.2 0.8 1.0 1 0 0 1 1 1 1 Putative sugar-binding domain UvrC_HhH_N PF08459.11 AID32799.1 - 0.086 12.7 0.0 0.09 12.7 0.0 1.2 1 0 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal 2-oxoacid_dh PF00198.23 AID32801.1 - 1.7e-27 96.4 0.1 1.8e-27 96.3 0.1 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 2-oxoacid_dh PF00198.23 AID32802.1 - 1.9e-24 86.4 0.6 2e-24 86.3 0.6 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 AID32803.1 - 2e-16 59.6 0.4 3.2e-16 58.9 0.4 1.3 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 AID32803.1 - 2.1e-13 50.3 0.9 2.1e-13 50.3 0.9 2.6 3 0 0 3 3 3 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 AID32803.1 - 8.7e-07 28.7 0.0 3.3e-06 26.8 0.0 1.9 1 1 1 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 AID32803.1 - 0.0061 17.2 0.1 0.88 10.3 0.0 2.4 1 1 1 2 2 2 1 HlyD family secretion protein GCV_H PF01597.19 AID32803.1 - 0.018 14.9 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Glycine cleavage H-protein NQRA PF05896.11 AID32803.1 - 0.12 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) QRPTase_N PF02749.16 AID32803.1 - 0.12 12.4 0.0 0.69 10.0 0.0 2.1 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, N-terminal domain RnfC_N PF13375.6 AID32803.1 - 0.16 11.9 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Transket_pyr PF02779.24 AID32804.1 - 2e-50 171.0 0.6 2.8e-50 170.5 0.6 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID32804.1 - 4.4e-43 146.1 0.3 8.5e-43 145.2 0.3 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 AID32804.1 - 0.00094 19.4 0.1 0.0018 18.5 0.1 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II E1_dh PF00676.20 AID32805.1 - 1.2e-87 293.7 0.2 1.3e-87 293.5 0.2 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 AID32805.1 - 1.8e-07 31.1 5.7 3.5e-07 30.1 4.1 2.2 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.21 AID32805.1 - 8.4e-06 25.0 0.1 1.3e-05 24.3 0.1 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 AID32805.1 - 6.9e-05 22.2 0.4 0.0001 21.6 0.4 1.4 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase SAF PF08666.12 AID32806.1 - 0.00032 21.2 0.1 0.0038 17.8 0.1 2.3 1 1 0 1 1 1 1 SAF domain DapB_N PF01113.20 AID32807.1 - 4.3e-06 26.8 4.1 1.6e-05 25.0 4.1 1.7 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 AID32807.1 - 0.00015 22.3 0.4 0.00024 21.7 0.4 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 AID32807.1 - 0.0024 18.2 0.3 0.0037 17.6 0.3 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 AID32807.1 - 0.0043 17.9 0.8 0.0093 16.8 0.8 1.5 1 1 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 3HCDH_N PF02737.18 AID32807.1 - 0.067 13.1 1.5 0.095 12.6 1.5 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAP PF06639.11 AID32807.1 - 0.16 12.3 0.1 0.27 11.6 0.1 1.4 1 0 0 1 1 1 0 Basal layer antifungal peptide (BAP) Patatin PF01734.22 AID32808.1 - 5.4e-08 33.3 1.3 1.3e-07 32.1 0.1 2.2 2 1 0 2 2 2 1 Patatin-like phospholipase PLA2_B PF01735.18 AID32808.1 - 0.0036 15.8 0.5 0.008 14.6 0.3 1.7 2 0 0 2 2 2 1 Lysophospholipase catalytic domain PhoLip_ATPase_C PF16212.5 AID32808.1 - 0.1 12.3 7.8 0.2 11.4 7.8 1.5 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal ODV-E18 PF10717.9 AID32808.1 - 0.28 11.1 4.7 1.8 8.5 0.2 3.2 3 0 0 3 3 3 0 Occlusion-derived virus envelope protein ODV-E18 FixQ PF05545.11 AID32808.1 - 1 9.4 5.4 0.19 11.7 0.2 2.4 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Metallophos PF00149.28 AID32809.1 - 1.1e-16 61.9 0.6 2.3e-16 60.9 0.6 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID32809.1 - 6.3e-09 36.2 0.1 1.4e-08 35.1 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain adh_short_C2 PF13561.6 AID32810.1 - 5.6e-57 193.0 2.8 1e-56 192.2 2.8 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32810.1 - 7.9e-52 175.6 0.4 1e-51 175.2 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32810.1 - 4.3e-08 33.3 0.5 6.7e-08 32.6 0.5 1.3 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 AID32810.1 - 0.01 15.2 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) LT-IIB PF06453.11 AID32810.1 - 0.046 13.6 0.0 0.24 11.3 0.0 1.9 1 1 0 2 2 2 0 Type II heat-labile enterotoxin , B subunit (LT-IIB) Epimerase PF01370.21 AID32810.1 - 0.09 12.2 0.1 0.31 10.4 0.1 1.9 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family ADC PF06314.11 AID32811.1 - 1e-81 274.0 0.2 1.3e-81 273.7 0.2 1.0 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) Arteri_Gl PF00951.18 AID32811.1 - 0.044 13.6 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF3734 PF12536.8 AID32812.1 - 2.1e-36 124.5 0.2 2.8e-36 124.1 0.2 1.2 1 0 0 1 1 1 1 Patatin phospholipase Patatin PF01734.22 AID32812.1 - 5e-12 46.4 0.0 9.6e-12 45.5 0.0 1.5 1 0 0 1 1 1 1 Patatin-like phospholipase PHO4 PF01384.20 AID32813.1 - 9.4e-86 287.9 13.7 9.4e-86 287.9 13.7 2.3 2 1 0 2 2 2 1 Phosphate transporter family HTH_IclR PF09339.10 AID32813.1 - 0.18 11.6 0.4 8.3 6.3 0.0 3.1 2 1 1 3 3 3 0 IclR helix-turn-helix domain ROK PF00480.20 AID32814.1 - 5e-23 82.0 0.0 7e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 ROK family MarR_2 PF12802.7 AID32814.1 - 5.3e-08 32.6 0.6 1.2e-07 31.5 0.6 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID32814.1 - 5e-06 26.0 0.2 1e-05 25.0 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID32814.1 - 0.00046 20.2 0.1 0.0012 18.8 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn helix HemN_C PF06969.16 AID32814.1 - 0.0007 19.6 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 HemN C-terminal domain HTH_Crp_2 PF13545.6 AID32814.1 - 0.0019 18.1 0.1 0.0036 17.2 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 AID32814.1 - 0.0036 17.2 0.1 0.0083 16.0 0.2 1.6 2 0 0 2 2 1 1 HTH domain MarR PF01047.22 AID32814.1 - 0.0046 16.8 0.1 0.013 15.4 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID32814.1 - 0.011 15.8 0.5 0.011 15.8 0.5 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_27 PF13463.6 AID32814.1 - 0.011 16.2 0.0 0.02 15.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_3 PF01381.22 AID32814.1 - 0.012 15.7 0.1 0.024 14.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix HTH_IclR PF09339.10 AID32814.1 - 0.036 13.9 0.2 0.15 11.9 0.0 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 AID32814.1 - 0.045 13.6 0.8 0.11 12.3 0.8 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain TFIIE_alpha PF02002.17 AID32814.1 - 0.17 11.8 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit FeoC PF09012.10 AID32814.1 - 0.18 11.9 0.1 0.51 10.4 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_28 PF13518.6 AID32814.1 - 0.28 11.3 1.5 0.49 10.6 0.1 2.2 2 0 0 2 2 1 0 Helix-turn-helix domain SBP_bac_1 PF01547.25 AID32815.1 - 1.1e-43 150.4 17.7 1.1e-43 150.4 17.7 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32815.1 - 2e-35 123.0 15.8 2.8e-35 122.5 15.5 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID32815.1 - 3.2e-07 30.0 3.4 0.0058 16.1 0.5 2.4 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Rhomboid_N PF12122.8 AID32815.1 - 0.089 13.0 0.4 0.41 10.8 0.4 2.1 1 1 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease BPD_transp_1 PF00528.22 AID32816.1 - 1.6e-18 67.1 16.3 1.6e-18 67.1 16.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3566 PF12089.8 AID32816.1 - 0.43 11.0 12.3 0.63 10.4 4.2 2.7 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) BPD_transp_1 PF00528.22 AID32817.1 - 1.7e-15 57.2 18.6 1.7e-15 57.2 18.6 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SIS PF01380.22 AID32818.1 - 1.1e-11 44.7 0.0 1.4e-06 28.2 0.0 2.4 2 1 0 2 2 2 2 SIS domain SIS_2 PF13580.6 AID32818.1 - 0.00068 19.7 1.0 0.048 13.7 0.1 3.0 2 1 0 3 3 3 1 SIS domain bact-PGI_C PF10432.9 AID32818.1 - 0.0082 16.2 0.0 0.033 14.3 0.0 2.0 3 0 0 3 3 3 1 Bacterial phospho-glucose isomerase C-terminal SIS domain PfkB PF00294.24 AID32819.1 - 3.6e-34 118.5 0.0 4.6e-34 118.1 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 AID32819.1 - 0.00028 20.4 0.1 0.00039 19.9 0.1 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ABC_tran PF00005.27 AID32820.1 - 1.6e-31 109.6 0.0 2.4e-31 109.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID32820.1 - 1.6e-11 44.9 0.1 6.8e-11 42.8 0.0 2.2 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 AID32820.1 - 4.2e-07 30.0 0.1 1e-06 28.8 0.1 1.7 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 AID32820.1 - 4.7e-07 30.3 0.1 2.1e-06 28.2 0.1 2.2 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA_21 PF13304.6 AID32820.1 - 4.7e-07 29.9 2.2 0.012 15.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID32820.1 - 4.1e-06 27.0 0.5 4.5e-05 23.6 0.1 2.5 2 0 0 2 2 2 1 TOBE domain SMC_N PF02463.19 AID32820.1 - 2.7e-05 23.7 0.4 0.0039 16.7 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID32820.1 - 2.7e-05 24.1 0.4 7.5e-05 22.7 0.2 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID32820.1 - 0.0021 18.5 1.1 0.0067 16.8 1.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID32820.1 - 0.004 16.9 0.5 0.0089 15.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID32820.1 - 0.0053 16.5 0.1 0.011 15.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID32820.1 - 0.035 14.6 0.1 0.061 13.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID32820.1 - 0.043 14.1 0.9 0.19 12.0 0.9 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID32820.1 - 0.084 12.1 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 AID32820.1 - 0.12 12.1 1.1 0.2 11.3 0.2 1.6 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 AID32820.1 - 0.13 12.2 0.6 0.24 11.3 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA PF00004.29 AID32820.1 - 0.14 12.6 0.1 0.9 10.0 0.0 2.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) FeoB_N PF02421.18 AID32820.1 - 0.14 11.7 0.5 0.84 9.2 0.1 2.0 2 0 0 2 2 2 0 Ferrous iron transport protein B Rad17 PF03215.15 AID32820.1 - 0.16 11.9 0.1 0.28 11.1 0.1 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 AID32820.1 - 0.26 11.5 2.0 0.64 10.2 0.5 2.2 2 0 0 2 2 2 0 AAA domain TetR_C_28 PF17937.1 AID32821.1 - 1.7e-16 60.4 0.0 3e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID32821.1 - 4.1e-11 42.5 0.0 8e-11 41.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family SesA PF17107.5 AID32821.1 - 0.032 14.4 0.0 0.05 13.8 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases HlyD_D23 PF16576.5 AID32822.1 - 1.1e-24 86.9 0.1 2.7e-24 85.6 0.1 1.7 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID32822.1 - 9.6e-19 68.1 1.6 4.1e-17 62.8 0.1 2.8 2 0 0 2 2 2 1 HlyD family secretion protein DUF4199 PF13858.6 AID32822.1 - 0.2 12.0 0.5 0.41 11.0 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) EpuA PF11772.8 AID32822.1 - 0.25 11.1 3.0 0.46 10.2 3.0 1.4 1 0 0 1 1 1 0 DNA-directed RNA polymerase subunit beta Biotin_lipoyl_2 PF13533.6 AID32822.1 - 0.26 11.1 3.5 1.5 8.7 3.5 2.4 1 1 0 1 1 1 0 Biotin-lipoyl like YajC PF02699.15 AID32822.1 - 0.78 9.7 0.0 0.78 9.7 0.0 2.4 3 0 0 3 3 3 0 Preprotein translocase subunit ACR_tran PF00873.19 AID32823.1 - 2.8e-275 915.9 29.4 3.2e-275 915.7 29.4 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 AID32823.1 - 0.0018 17.7 31.0 0.082 12.3 15.5 2.6 2 0 0 2 2 2 2 Protein export membrane protein YkuD PF03734.14 AID32824.1 - 5.4e-18 65.8 0.1 6.9e-18 65.5 0.1 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain RskA PF10099.9 AID32824.1 - 0.034 14.4 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Trans_reg_C PF00486.28 AID32827.1 - 2.7e-16 59.4 0.0 4.3e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID32827.1 - 0.00075 19.7 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.24 AID32828.1 - 6.2e-23 81.1 0.0 9.3e-23 80.5 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID32828.1 - 9.9e-19 67.2 0.0 4.7e-18 65.0 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal HATPase_c PF02518.26 AID32829.1 - 1.4e-18 67.4 0.1 4.1e-18 65.9 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 AID32829.1 - 6.5e-17 61.6 0.0 1.3e-16 60.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID32829.1 - 1.7e-11 44.3 0.0 3.7e-11 43.2 0.0 1.6 1 0 0 1 1 1 1 PAS domain HisKA PF00512.25 AID32829.1 - 8.6e-11 41.7 0.0 2.3e-10 40.3 0.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain GAF PF01590.26 AID32829.1 - 1.2e-10 42.1 0.2 5.7e-10 39.9 0.0 2.3 3 0 0 3 3 3 1 GAF domain Response_reg PF00072.24 AID32829.1 - 6.7e-09 35.9 0.0 1.3e-08 35.0 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain PAS_8 PF13188.7 AID32829.1 - 7e-08 32.3 0.0 2.3e-07 30.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain GAF_2 PF13185.6 AID32829.1 - 3.3e-05 24.2 0.4 0.00081 19.7 0.1 3.1 4 0 0 4 4 4 1 GAF domain PAS_4 PF08448.10 AID32829.1 - 6.4e-05 23.2 0.0 0.00018 21.7 0.0 1.9 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 AID32829.1 - 0.006 16.5 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 GHKL domain PAS_3 PF08447.12 AID32829.1 - 0.0068 16.7 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold AalphaY_MDB PF04611.12 AID32830.1 - 0.058 13.4 0.2 0.08 12.9 0.2 1.3 1 0 0 1 1 1 0 Mating type protein A alpha Y mating type dependent binding region Ring_hydroxyl_A PF00848.19 AID32832.1 - 8.3e-24 84.7 0.6 1.3e-23 84.1 0.6 1.2 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 AID32832.1 - 3e-17 62.4 0.1 5e-17 61.6 0.1 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Aminotran_3 PF00202.21 AID32833.1 - 1.1e-83 281.1 0.0 1.4e-83 280.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III HTH_Crp_2 PF13545.6 AID32833.1 - 0.00059 19.7 0.0 0.0017 18.3 0.0 1.8 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Crp PF00325.20 AID32833.1 - 0.00083 19.0 0.1 0.0026 17.4 0.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family BPD_transp_1 PF00528.22 AID32835.1 - 1.5e-11 44.4 18.7 1.5e-11 44.4 18.7 2.5 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32836.1 - 8.6e-18 64.7 15.0 8.6e-18 64.7 15.0 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4190 PF13828.6 AID32836.1 - 0.077 12.8 0.7 0.077 12.8 0.7 3.4 2 2 1 3 3 3 0 Domain of unknown function (DUF4190) ABC_tran PF00005.27 AID32837.1 - 1.7e-35 122.5 0.0 2.6e-35 121.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID32837.1 - 1.4e-13 50.8 0.2 1.6e-12 47.4 0.0 2.3 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 AID32837.1 - 3.1e-07 30.5 0.2 0.0027 17.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 AID32837.1 - 6.2e-05 23.7 0.1 0.00018 22.3 0.1 1.9 1 0 0 1 1 1 1 MalK OB fold domain SMC_N PF02463.19 AID32837.1 - 0.00041 19.9 0.1 0.14 11.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID32837.1 - 0.00081 19.7 1.2 0.0085 16.4 1.2 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID32837.1 - 0.001 19.5 0.4 0.012 16.1 0.4 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID32837.1 - 0.0024 18.3 0.6 0.0068 16.8 0.6 1.9 1 1 0 1 1 1 1 AAA ATPase domain TniB PF05621.11 AID32837.1 - 0.0054 16.2 0.3 0.14 11.5 0.2 2.1 2 0 0 2 2 2 1 Bacterial TniB protein PhoH PF02562.16 AID32837.1 - 0.0062 16.0 0.1 1.3 8.4 0.1 2.2 2 0 0 2 2 2 1 PhoH-like protein AAA_25 PF13481.6 AID32837.1 - 0.0082 15.7 0.1 0.53 9.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain Myosin_N PF02736.19 AID32837.1 - 0.02 14.7 0.1 0.048 13.5 0.1 1.6 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain RsgA_GTPase PF03193.16 AID32837.1 - 0.022 14.7 0.0 0.069 13.0 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_29 PF13555.6 AID32837.1 - 0.028 14.2 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 AID32837.1 - 0.029 14.3 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_23 PF13476.6 AID32837.1 - 0.032 14.7 0.1 0.064 13.8 0.1 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID32837.1 - 0.033 13.8 0.0 0.9 9.1 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP-synt_ab PF00006.25 AID32837.1 - 0.058 13.0 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 AID32837.1 - 0.093 12.6 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 AID32837.1 - 0.096 12.9 0.2 0.56 10.4 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID32837.1 - 0.11 12.2 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Amino_oxidase PF01593.24 AID32838.1 - 3.9e-54 184.6 0.7 4.7e-38 131.6 0.1 2.0 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 AID32838.1 - 2.4e-12 46.9 0.4 6.7e-12 45.5 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID32838.1 - 2.8e-09 37.0 2.6 1.3e-06 28.2 1.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID32838.1 - 1e-07 31.6 0.2 0.00094 18.5 0.2 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID32838.1 - 2.4e-07 30.3 0.4 3.6e-07 29.7 0.4 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID32838.1 - 5.1e-07 29.2 0.2 1.1e-05 24.9 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID32838.1 - 1.7e-06 27.4 1.0 3.2e-06 26.5 1.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 AID32838.1 - 2.1e-06 28.2 1.6 0.00025 21.6 0.7 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID32838.1 - 5.9e-06 25.9 0.1 8.1e-06 25.4 0.1 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID32838.1 - 2.6e-05 23.6 0.1 4.6e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 AID32838.1 - 4.3e-05 22.7 0.2 0.005 15.9 0.3 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.14 AID32838.1 - 0.00043 19.1 0.4 0.0024 16.6 0.3 1.9 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 AID32838.1 - 0.00099 18.3 0.2 0.0017 17.5 0.2 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 AID32838.1 - 0.052 13.5 2.0 0.8 9.7 0.2 2.5 2 1 0 2 2 2 0 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 AID32838.1 - 0.072 12.4 0.1 0.13 11.5 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 AID32838.1 - 0.11 12.8 0.3 0.25 11.6 0.3 1.6 1 0 0 1 1 1 0 TrkA-N domain SBP_bac_6 PF13343.6 AID32839.1 - 3.2e-24 85.7 1.1 4.3e-24 85.3 1.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID32839.1 - 3.3e-20 73.1 6.4 4.4e-20 72.7 6.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32839.1 - 3.7e-07 30.4 3.8 5.9e-07 29.7 3.8 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32839.1 - 4.6e-05 23.3 0.1 7.9e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID32840.1 - 2.3e-34 118.9 5.7 3e-34 118.5 5.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32840.1 - 7.8e-07 29.1 0.0 1.2e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TetR_C_6 PF13977.6 AID32841.1 - 3.6e-22 78.8 1.7 3.6e-22 78.8 1.7 1.8 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 AID32841.1 - 1.7e-13 50.1 0.2 3.2e-13 49.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID32841.1 - 5e-05 23.5 0.6 0.025 14.8 0.1 2.5 1 1 1 2 2 2 2 Tetracyclin repressor-like, C-terminal domain Methyltransf_11 PF08241.12 AID32842.1 - 1.3e-16 61.0 0.0 3.2e-15 56.5 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID32842.1 - 8.8e-15 55.2 0.0 5e-13 49.6 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32842.1 - 8.1e-14 51.7 0.0 9.5e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID32842.1 - 1.1e-08 34.7 0.0 2.2e-08 33.7 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 AID32842.1 - 4.1e-07 30.0 0.0 6.9e-07 29.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32842.1 - 6.5e-06 26.8 0.0 1.1e-05 26.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 AID32842.1 - 0.0052 15.4 0.0 0.0067 15.0 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase CMAS PF02353.20 AID32843.1 - 0.00067 19.0 0.0 0.00079 18.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 AID32843.1 - 0.0018 19.0 0.1 0.0045 17.7 0.1 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32843.1 - 0.0022 17.9 0.0 0.0023 17.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32843.1 - 0.0029 17.4 0.0 0.0037 17.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID32843.1 - 0.01 15.4 0.1 0.015 14.8 0.2 1.3 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_9 PF08003.11 AID32843.1 - 0.036 13.0 0.0 0.045 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) PrmA PF06325.13 AID32843.1 - 0.097 12.0 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 AID32843.1 - 0.11 11.6 0.0 0.15 11.1 0.0 1.3 2 0 0 2 2 2 0 DREV methyltransferase Ubie_methyltran PF01209.18 AID32843.1 - 0.14 11.5 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family RrnaAD PF00398.20 AID32843.1 - 0.26 10.3 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DAO PF01266.24 AID32844.1 - 1.1e-13 51.5 0.0 2.2e-12 47.2 0.0 2.7 1 1 0 2 2 2 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 AID32844.1 - 2.6e-13 50.1 0.2 4.1e-12 46.1 0.2 2.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 AID32844.1 - 6.4e-10 39.1 0.0 1.5e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AID32844.1 - 5.2e-07 29.1 0.9 8.5e-05 21.8 0.3 2.9 2 1 1 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 AID32844.1 - 9.2e-07 28.6 0.0 1.9e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID32844.1 - 0.00012 22.6 0.6 0.0045 17.5 0.2 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID32844.1 - 0.0011 18.3 0.1 0.0017 17.7 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID32844.1 - 0.0017 17.7 0.1 0.0089 15.3 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID32844.1 - 0.002 16.9 0.1 0.0073 15.1 0.1 1.8 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 AID32844.1 - 0.0058 15.8 1.2 0.031 13.4 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A GDI PF00996.18 AID32844.1 - 0.0094 14.5 0.1 0.074 11.6 0.0 1.9 2 0 0 2 2 2 1 GDP dissociation inhibitor Thi4 PF01946.17 AID32844.1 - 0.0099 15.1 0.3 0.021 14.1 0.1 1.6 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.6 AID32844.1 - 0.01 15.1 0.3 0.017 14.4 0.3 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID32844.1 - 0.016 14.3 1.3 2.9 6.9 0.4 2.3 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 AID32844.1 - 0.19 10.6 1.8 0.34 9.7 0.2 1.9 2 0 0 2 2 2 0 Tryptophan halogenase Amino_oxidase PF01593.24 AID32845.1 - 9.9e-14 51.5 0.0 1.3e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 AID32845.1 - 0.00015 21.5 0.4 0.00021 21.0 0.4 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 AID32845.1 - 0.00016 21.1 0.2 0.00025 20.5 0.2 1.2 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 AID32845.1 - 0.0051 16.0 0.1 0.009 15.1 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 AID32845.1 - 0.017 13.8 0.0 0.024 13.4 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein GCV_T PF01571.21 AID32846.1 - 2.4e-57 194.2 0.0 3.5e-57 193.7 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID32846.1 - 7.2e-07 29.0 0.0 1.6e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Peptidase_M19 PF01244.21 AID32848.1 - 3.3e-102 341.9 0.0 3.7e-102 341.8 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) Acetyltransf_CG PF14542.6 AID32849.1 - 1.1e-24 86.4 0.0 1.2e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_1 PF00583.25 AID32849.1 - 0.0015 18.7 0.0 0.0019 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DLH PF01738.18 AID32850.1 - 1.4e-05 24.7 0.0 1.9e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 AID32850.1 - 8.4e-05 22.1 0.0 0.18 11.3 0.0 2.1 1 1 1 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 AID32850.1 - 0.00023 20.5 0.0 0.034 13.4 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 AID32850.1 - 0.00093 18.9 0.0 0.023 14.4 0.0 2.0 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 AID32850.1 - 0.0018 18.4 0.0 0.0028 17.7 0.0 1.2 1 0 0 1 1 1 1 TAP-like protein Orexin PF02072.15 AID32850.1 - 0.042 13.8 0.0 0.067 13.1 0.0 1.4 1 0 0 1 1 1 0 Prepro-orexin Ndr PF03096.14 AID32850.1 - 0.045 12.4 0.0 0.061 12.0 0.0 1.2 1 0 0 1 1 1 0 Ndr family PKD PF00801.20 AID32850.1 - 0.088 12.7 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 PKD domain Glyoxalase PF00903.25 AID32851.1 - 7.1e-21 74.7 0.1 9.7e-21 74.3 0.1 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32851.1 - 0.0086 16.3 0.1 0.15 12.3 0.0 2.8 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Terminase_5 PF06056.12 AID32851.1 - 0.2 11.6 0.0 0.42 10.5 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Sulfatase PF00884.23 AID32852.1 - 2.5e-52 178.2 0.0 3.6e-52 177.7 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 AID32852.1 - 2.5e-06 27.3 0.0 0.075 12.6 0.0 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4976 PF16347.5 AID32852.1 - 4.9e-06 26.7 0.0 4.4e-05 23.7 0.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4976) Sulfatase_C PF14707.6 AID32852.1 - 0.0042 17.8 0.0 0.0086 16.8 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase PRC PF05239.16 AID32853.1 - 1.8e-47 159.3 20.1 6.3e-17 61.4 2.9 3.1 3 0 0 3 3 3 3 PRC-barrel domain DAGK_cat PF00781.24 AID32854.1 - 1.2e-22 79.9 0.2 1.8e-22 79.3 0.2 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 AID32854.1 - 0.028 13.6 0.1 0.038 13.2 0.1 1.3 1 0 0 1 1 1 0 ATP-NAD kinase HWE_HK PF07536.14 AID32856.1 - 1.7e-28 99.1 0.3 4.5e-28 97.8 0.1 1.9 2 0 0 2 2 2 1 HWE histidine kinase GAF PF01590.26 AID32856.1 - 1e-07 32.7 0.0 2.7e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 AID32856.1 - 2.4e-07 31.1 0.0 6.7e-07 29.7 0.0 1.8 1 0 0 1 1 1 1 GAF domain HisKA_2 PF07568.12 AID32856.1 - 3.7e-07 30.1 0.0 9.1e-07 28.9 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 AID32856.1 - 1.3e-05 25.4 0.0 3.1e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 PAS fold DNA_processg_A PF02481.15 AID32856.1 - 0.062 12.5 0.1 0.11 11.7 0.1 1.3 1 0 0 1 1 1 0 DNA recombination-mediator protein A HATPase_c_2 PF13581.6 AID32856.1 - 0.088 12.8 0.0 0.25 11.3 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SAYSvFN PF10260.9 AID32857.1 - 0.0068 16.3 0.4 0.022 14.6 0.1 2.1 3 0 0 3 3 3 1 Uncharacterized conserved domain (SAYSvFN) DUF2298 PF10060.9 AID32857.1 - 0.27 9.9 9.6 0.75 8.4 8.1 1.7 1 1 1 2 2 2 0 Uncharacterized membrane protein (DUF2298) Nitrate_red_gam PF02665.14 AID32857.1 - 0.57 9.7 5.0 1.2 8.6 4.7 1.6 1 1 1 2 2 2 0 Nitrate reductase gamma subunit Phage_holin_3_6 PF07332.11 AID32857.1 - 2 8.5 26.7 0.031 14.3 17.9 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III FtsX PF02687.21 AID32857.1 - 5.6 7.5 9.6 0.4 11.2 1.0 2.7 1 1 1 2 2 2 0 FtsX-like permease family DUF883 PF05957.13 AID32858.1 - 1.6e-20 73.5 2.2 2.4e-20 72.9 2.2 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Apolipoprotein PF01442.18 AID32858.1 - 0.0023 17.8 1.8 0.0029 17.5 1.8 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain ABC_tran_CTD PF16326.5 AID32858.1 - 0.0036 17.5 0.2 0.0062 16.8 0.2 1.4 1 0 0 1 1 1 1 ABC transporter C-terminal domain FlxA PF14282.6 AID32858.1 - 0.0045 16.9 0.7 0.0073 16.3 0.7 1.5 1 1 0 1 1 1 1 FlxA-like protein JAKMIP_CC3 PF16034.5 AID32858.1 - 0.0054 16.7 0.8 0.0079 16.2 0.7 1.3 1 1 0 1 1 1 1 JAKMIP CC3 domain Ax_dynein_light PF10211.9 AID32858.1 - 0.019 14.9 0.2 0.023 14.7 0.2 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF4200 PF13863.6 AID32858.1 - 0.021 15.2 0.6 0.021 15.2 0.6 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) OmpH PF03938.14 AID32858.1 - 0.032 14.6 0.2 0.035 14.5 0.2 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Uso1_p115_C PF04871.13 AID32858.1 - 0.048 14.0 1.3 0.063 13.7 1.3 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF5415 PF17436.2 AID32858.1 - 0.061 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5415) Mis14 PF08641.12 AID32858.1 - 0.1 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 Kinetochore protein Mis14 like COG5 PF10392.9 AID32858.1 - 0.17 12.0 0.5 0.21 11.7 0.5 1.4 1 1 0 1 1 1 0 Golgi transport complex subunit 5 cNMP_binding PF00027.29 AID32859.1 - 3e-15 56.1 0.0 5.1e-15 55.3 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 AID32859.1 - 3.3e-10 39.8 0.0 6.8e-10 38.8 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID32859.1 - 0.039 13.8 0.0 0.22 11.4 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_24 PF13412.6 AID32859.1 - 0.061 12.9 0.3 0.2 11.2 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Response_reg PF00072.24 AID32861.1 - 1.1e-07 31.9 0.0 1.4e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 AID32862.1 - 7.4e-18 64.0 0.0 1.1e-17 63.5 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 AID32862.1 - 1.2e-15 57.0 0.3 2e-15 56.3 0.1 1.5 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID32862.1 - 2.4e-08 33.4 0.1 3.5e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID32862.1 - 4.6e-06 26.6 0.1 5.5e-06 26.4 0.1 1.2 1 0 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 AID32862.1 - 0.011 15.5 0.0 0.021 14.6 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain GerE PF00196.19 AID32862.1 - 0.018 14.6 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_28 PF13518.6 AID32862.1 - 0.025 14.7 0.1 0.051 13.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Cuticle_1 PF08140.11 AID32862.1 - 0.099 12.7 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Crustacean cuticle protein repeat NICE-3 PF07406.11 AID32862.1 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 NICE-3 protein DUF134 PF02001.16 AID32862.1 - 0.14 12.8 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF134 NepR PF18557.1 AID32863.1 - 8e-17 60.6 1.0 1e-16 60.2 1.0 1.2 1 0 0 1 1 1 1 Anti-sigma factor NepR Response_reg PF00072.24 AID32864.1 - 1.9e-13 50.5 0.0 3.3e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 AID32864.1 - 5.8e-05 22.7 0.0 0.00016 21.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 DUF3775 PF12616.8 AID32864.1 - 0.081 12.9 2.7 0.73 9.9 0.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3775) DUF1328 PF07043.13 AID32865.1 - 8.1e-16 58.0 25.8 3e-15 56.1 21.9 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1328) DUF805 PF05656.14 AID32865.1 - 1.2 9.6 5.2 1.3 9.5 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF805) HWE_HK PF07536.14 AID32866.1 - 6.7e-26 90.8 0.1 1.7e-25 89.5 0.1 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_4 PF08448.10 AID32866.1 - 0.00061 20.0 0.2 0.0026 18.0 0.1 2.2 3 0 0 3 3 3 1 PAS fold HisKA_2 PF07568.12 AID32866.1 - 0.021 14.9 0.0 0.054 13.6 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase HATPase_c_2 PF13581.6 AID32866.1 - 0.037 14.0 0.0 0.09 12.7 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PAS_10 PF13596.6 AID32866.1 - 0.17 12.5 0.0 0.52 10.9 0.0 1.9 1 0 0 1 1 1 0 PAS domain Gly-zipper_YMGG PF13441.6 AID32869.1 - 0.00026 20.7 25.4 0.00038 20.1 25.4 1.4 1 1 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 AID32869.1 - 0.00056 19.9 24.1 0.001 19.0 24.1 1.4 1 0 0 1 1 1 1 Glycine zipper Rick_17kDa_Anti PF05433.15 AID32869.1 - 0.0064 16.3 21.7 0.0095 15.8 21.7 1.3 1 0 0 1 1 1 1 Glycine zipper 2TM domain Bacteriocin_IIc PF10439.9 AID32869.1 - 0.15 12.2 17.9 0.19 11.9 17.9 1.2 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide AAA_10 PF12846.7 AID32869.1 - 0.2 10.5 0.0 0.21 10.4 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain LPAM_1 PF08139.12 AID32869.1 - 0.32 11.6 1.4 0.83 10.3 1.4 1.8 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF3482 PF11981.8 AID32869.1 - 1.9 7.8 9.6 1.9 7.8 9.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Gly-zipper_OmpA PF13436.6 AID32869.1 - 3.2 7.6 25.5 4 7.3 24.0 1.9 1 1 1 2 2 2 0 Glycine-zipper domain CHASE PF03924.13 AID32870.1 - 4e-37 128.0 0.3 1.1e-36 126.5 0.0 1.8 2 0 0 2 2 2 1 CHASE domain HWE_HK PF07536.14 AID32870.1 - 1.2e-23 83.6 1.2 1.8e-23 83.0 0.2 2.0 2 0 0 2 2 2 1 HWE histidine kinase HisKA_2 PF07568.12 AID32870.1 - 1.7e-06 28.0 0.7 1.2e-05 25.3 0.2 2.2 2 0 0 2 2 2 1 Histidine kinase DUF3731 PF12531.8 AID32870.1 - 0.0016 18.3 0.5 0.0029 17.4 0.5 1.4 1 0 0 1 1 1 1 DNA-K related protein ABC_tran PF00005.27 AID32871.1 - 4.2e-30 105.1 0.0 5.4e-30 104.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32871.1 - 3.8e-12 46.6 0.1 6.8e-05 22.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32871.1 - 6.1e-07 29.1 0.0 0.0031 17.0 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID32871.1 - 0.0001 22.8 0.0 0.00014 22.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID32871.1 - 0.00039 20.2 0.0 0.00082 19.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID32871.1 - 0.00051 19.7 0.0 0.0036 17.0 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID32871.1 - 0.00059 18.7 0.6 0.17 10.6 0.1 3.0 2 1 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID32871.1 - 0.001 19.0 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 AID32871.1 - 0.0029 17.4 0.0 0.01 15.6 0.0 1.6 1 1 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 AID32871.1 - 0.0029 18.0 0.1 0.0044 17.4 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 AID32871.1 - 0.017 15.2 0.0 0.036 14.2 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase KAP_NTPase PF07693.14 AID32871.1 - 0.095 11.9 0.0 0.12 11.6 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain AAA_13 PF13166.6 AID32871.1 - 0.11 11.1 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 AID32871.1 - 0.12 11.5 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 AID32871.1 - 0.13 12.5 0.1 0.34 11.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain DUF2813 PF11398.8 AID32871.1 - 0.15 11.2 0.0 2.3 7.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) BPD_transp_2 PF02653.16 AID32872.1 - 8.4e-28 97.3 41.5 3.4e-26 92.0 41.5 2.2 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2517 PF10725.9 AID32872.1 - 0.58 10.0 5.7 6.4 6.6 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2517) TMEM72 PF16054.5 AID32872.1 - 6.8 6.3 7.6 2.5 7.8 1.7 2.9 3 1 0 3 3 3 0 Transmembrane protein family 72 Peripla_BP_4 PF13407.6 AID32873.1 - 1.8e-59 201.4 14.3 2.3e-59 201.1 14.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID32873.1 - 5.1e-07 29.4 0.9 8.4e-07 28.7 0.9 1.4 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID32873.1 - 3.9e-05 24.0 0.9 7.1e-05 23.2 0.3 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain ABC_sub_bind PF04392.12 AID32873.1 - 0.00029 20.2 3.4 0.0015 17.9 0.4 2.2 2 0 0 2 2 2 1 ABC transporter substrate binding protein Cys_Met_Meta_PP PF01053.20 AID32873.1 - 0.056 12.0 0.0 0.094 11.2 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme ROK PF00480.20 AID32874.1 - 3.6e-33 115.3 0.0 5.1e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 ROK family MarR_2 PF12802.7 AID32874.1 - 2.2e-05 24.2 0.5 0.00015 21.5 0.3 2.3 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 AID32874.1 - 0.004 16.9 0.2 0.011 15.5 0.2 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID32874.1 - 0.0047 16.5 0.1 0.011 15.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID32874.1 - 0.028 14.4 0.1 0.065 13.2 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_23 PF13384.6 AID32874.1 - 0.058 13.2 0.2 0.058 13.2 0.2 2.8 4 0 0 4 4 4 0 Homeodomain-like domain Trans_reg_C PF00486.28 AID32875.1 - 2.8e-27 94.6 0.0 5.9e-27 93.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID32875.1 - 1.4e-25 89.7 0.0 1.9e-25 89.2 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Glyco_trans_4_4 PF13579.6 AID32875.1 - 0.051 14.0 0.6 0.25 11.8 0.6 2.0 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain PhoU PF01895.19 AID32876.1 - 4.7e-36 123.1 9.7 2.9e-22 78.9 1.2 2.1 2 0 0 2 2 2 2 PhoU domain ABC_tran PF00005.27 AID32877.1 - 1.8e-34 119.2 0.0 2.9e-34 118.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32877.1 - 2.9e-11 43.7 0.2 4.2e-05 23.5 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32877.1 - 2.9e-08 33.4 0.1 1.6e-07 31.0 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID32877.1 - 2.9e-05 23.9 0.0 3.3e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID32877.1 - 4e-05 23.6 0.0 9.5e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 AID32877.1 - 5.1e-05 23.6 0.0 0.00025 21.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID32877.1 - 6.2e-05 22.8 0.0 0.013 15.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID32877.1 - 0.00011 22.6 0.1 0.00029 21.3 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID32877.1 - 0.00027 21.5 0.1 0.00036 21.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID32877.1 - 0.001 18.7 0.0 0.0021 17.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 AID32877.1 - 0.0018 18.2 0.0 0.0027 17.7 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_25 PF13481.6 AID32877.1 - 0.0066 16.0 0.1 0.089 12.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain Relaxase PF03432.14 AID32877.1 - 0.0066 16.1 0.0 0.035 13.7 0.0 1.9 2 0 0 2 2 2 1 Relaxase/Mobilisation nuclease domain TniB PF05621.11 AID32877.1 - 0.036 13.5 0.0 1.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein IstB_IS21 PF01695.17 AID32877.1 - 0.051 13.3 0.2 22 4.8 0.0 2.9 2 1 1 3 3 3 0 IstB-like ATP binding protein AAA_33 PF13671.6 AID32877.1 - 0.059 13.5 0.0 0.16 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 AID32877.1 - 0.063 13.2 0.3 0.32 10.9 0.3 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea PRK PF00485.18 AID32877.1 - 0.08 12.7 0.0 0.24 11.1 0.0 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family G-alpha PF00503.20 AID32877.1 - 0.099 11.8 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA PF00004.29 AID32877.1 - 0.1 13.0 0.3 1.1 9.7 0.3 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 AID32877.1 - 0.14 10.8 0.0 0.88 8.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 AID32877.1 - 0.15 12.1 0.1 0.79 9.7 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 AID32877.1 - 0.15 12.4 0.1 0.97 9.9 0.0 2.2 1 1 1 2 2 2 0 RNA helicase BPD_transp_1 PF00528.22 AID32878.1 - 1.1e-24 87.1 15.0 1.1e-24 87.1 15.0 2.1 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component Podoplanin PF05808.11 AID32878.1 - 3.3 7.8 6.1 4.8 7.3 0.2 2.5 2 0 0 2 2 2 0 Podoplanin BPD_transp_1 PF00528.22 AID32879.1 - 3.8e-15 56.1 39.0 5.6e-15 55.6 24.9 2.2 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF1158 PF06643.11 AID32879.1 - 1 9.9 4.7 0.5 10.9 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1158) PBP_like_2 PF12849.7 AID32880.1 - 1.2e-63 215.4 8.5 1.5e-63 215.1 8.5 1.0 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 AID32880.1 - 5.4e-08 32.2 0.0 8.5e-08 31.5 0.0 1.3 1 0 0 1 1 1 1 PBP superfamily domain PAS_4 PF08448.10 AID32881.1 - 1.1e-45 154.4 6.6 7.3e-14 52.0 0.0 7.3 8 0 0 8 8 8 5 PAS fold Response_reg PF00072.24 AID32881.1 - 2.1e-43 147.0 1.4 1.1e-23 83.6 0.0 3.4 3 0 0 3 3 3 2 Response regulator receiver domain PAS_7 PF12860.7 AID32881.1 - 1e-41 141.7 0.0 3.8e-14 52.8 0.0 4.5 4 0 0 4 4 4 3 PAS fold HATPase_c PF02518.26 AID32881.1 - 8.6e-34 116.4 0.6 1.7e-33 115.5 0.6 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 AID32881.1 - 3.8e-27 94.5 0.1 3.5e-06 27.0 0.0 6.5 6 0 0 6 6 6 5 PAS fold PAS_9 PF13426.7 AID32881.1 - 3e-21 75.6 0.0 6.4e-08 32.8 0.0 5.3 5 0 0 5 5 5 3 PAS domain HisKA PF00512.25 AID32881.1 - 4.4e-20 71.5 0.0 1.4e-19 69.8 0.0 2.0 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 AID32881.1 - 4.9e-20 71.1 2.6 0.0033 17.4 0.0 6.7 6 0 0 6 6 6 4 PAS domain PAS_3 PF08447.12 AID32881.1 - 3.7e-08 33.6 0.1 0.48 10.8 0.0 4.7 4 0 0 4 4 4 3 PAS fold VanY PF02557.17 AID32881.1 - 0.0098 15.7 0.0 0.36 10.6 0.0 2.5 2 0 0 2 2 2 1 D-alanyl-D-alanine carboxypeptidase HATPase_c_3 PF13589.6 AID32881.1 - 0.018 14.9 0.0 0.036 13.9 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ORF_12_N PF18042.1 AID32881.1 - 0.081 13.3 0.0 0.35 11.3 0.0 2.2 1 0 0 1 1 1 0 ORF 12 gene product N-terminal Focadhesin PF11229.8 AID32881.1 - 0.27 9.4 0.1 1.7 6.8 0.0 2.1 2 0 0 2 2 2 0 Focadhesin RCDG1 PF15725.5 AID32882.1 - 2.6 8.5 10.7 2.6 8.5 2.8 2.1 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein DUF2865 PF11064.8 AID32884.1 - 5.2e-23 81.6 0.1 1.1e-22 80.6 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2865) Neurokinin_B PF03823.14 AID32884.1 - 0.053 13.5 0.2 0.11 12.5 0.2 1.5 1 0 0 1 1 1 0 Neurokinin B GST_N_3 PF13417.6 AID32887.1 - 1.8e-11 44.3 0.0 3.4e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID32887.1 - 2.4e-07 31.0 0.0 4.8e-07 30.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID32887.1 - 1.2e-06 28.4 0.3 4.1e-06 26.7 0.2 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID32887.1 - 4.7e-05 23.6 0.0 9.3e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID32887.1 - 0.0024 18.1 0.8 0.0047 17.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID32887.1 - 0.011 15.9 0.4 0.03 14.5 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Archaeal_AmoA PF12942.7 AID32887.1 - 0.042 13.6 0.5 4.1 7.1 0.0 2.2 2 0 0 2 2 2 0 Archaeal ammonia monooxygenase subunit A (AmoA) Glyoxalase PF00903.25 AID32888.1 - 1.4e-14 54.3 0.0 1.9e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32888.1 - 0.0055 17.0 0.0 0.011 16.0 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF202 PF02656.15 AID32889.1 - 0.019 15.4 3.8 0.019 15.4 3.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF4173 PF13777.6 AID32889.1 - 0.059 12.8 4.9 0.094 12.1 4.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4173) DHHC PF01529.20 AID32889.1 - 0.41 10.8 1.7 0.4 10.8 0.3 1.6 1 1 1 2 2 2 0 DHHC palmitoyltransferase PHO4 PF01384.20 AID32889.1 - 0.8 8.7 3.2 0.9 8.5 3.2 1.1 1 0 0 1 1 1 0 Phosphate transporter family DUF4131 PF13567.6 AID32889.1 - 9.6 5.8 11.6 90 2.7 11.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Glyoxalase PF00903.25 AID32890.1 - 3.3e-12 46.7 0.0 3.7e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32890.1 - 0.00086 19.5 0.0 0.0011 19.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TrbC PF04956.13 AID32891.1 - 0.054 13.7 0.0 0.08 13.2 0.0 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family DUF1970 PF09301.10 AID32891.1 - 0.084 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) PseudoU_synth_2 PF00849.22 AID32892.1 - 6.6e-34 117.3 0.0 9.6e-34 116.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 AID32892.1 - 1.8e-08 33.9 0.0 3.3e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 AID32892.1 - 0.068 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 S4 domain Sigma70_r4 PF04545.16 AID32893.1 - 4.2e-19 67.8 5.2 1.9e-17 62.5 3.1 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 AID32893.1 - 4.4e-16 58.4 0.1 1.6e-15 56.6 0.0 2.0 3 0 0 3 3 3 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID32893.1 - 0.00036 20.2 3.1 0.033 13.9 0.7 2.6 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r3 PF04539.16 AID32893.1 - 0.00062 19.8 3.5 0.019 15.1 0.3 2.5 2 0 0 2 2 2 1 Sigma-70 region 3 HTH_11 PF08279.12 AID32893.1 - 0.00062 19.7 0.8 0.087 12.8 0.3 2.6 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 AID32893.1 - 0.0013 18.6 0.3 0.98 9.4 0.0 2.6 2 0 0 2 2 2 2 MarR family GntR PF00392.21 AID32893.1 - 0.017 14.8 1.0 0.1 12.3 0.4 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_23 PF13384.6 AID32893.1 - 0.036 13.9 0.3 3.2 7.7 0.2 2.6 2 0 0 2 2 2 0 Homeodomain-like domain HTH_3 PF01381.22 AID32893.1 - 0.076 13.1 0.1 1.6 8.9 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix Lactamase_B PF00753.27 AID32894.1 - 3.3e-26 92.5 2.1 4.2e-26 92.2 2.1 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily AhpC-TSA PF00578.21 AID32895.1 - 9.7e-30 103.0 0.0 1.4e-29 102.6 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 AID32895.1 - 8.4e-15 54.3 0.0 1.6e-14 53.4 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 AID32895.1 - 2.3e-09 37.1 0.0 3.3e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 AID32895.1 - 0.0095 16.2 0.0 0.014 15.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like SCO1-SenC PF02630.14 AID32895.1 - 0.084 12.8 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 SCO1/SenC DUF4174 PF13778.6 AID32895.1 - 0.1 13.1 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4174) ZapA PF05164.13 AID32896.1 - 5.2e-24 84.5 0.5 8.3e-24 83.8 0.5 1.4 1 1 0 1 1 1 1 Cell division protein ZapA HBM PF16591.5 AID32896.1 - 0.014 14.8 0.3 0.018 14.5 0.3 1.1 1 0 0 1 1 1 0 Helical bimodular sensor domain TPR_MLP1_2 PF07926.12 AID32896.1 - 0.04 14.0 0.5 0.063 13.3 0.5 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4164 PF13747.6 AID32897.1 - 2.9e-30 104.4 11.9 3.2e-30 104.3 11.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4164) Jnk-SapK_ap_N PF09744.9 AID32897.1 - 0.00079 19.7 4.6 0.00089 19.5 4.6 1.0 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Vps5 PF09325.10 AID32897.1 - 0.0049 16.4 1.2 0.0056 16.3 1.2 1.0 1 0 0 1 1 1 1 Vps5 C terminal like Prefoldin_2 PF01920.20 AID32897.1 - 0.0074 16.2 3.0 0.88 9.6 1.1 2.1 1 1 1 2 2 2 2 Prefoldin subunit GAS PF13851.6 AID32897.1 - 0.0075 15.6 2.4 0.0088 15.4 2.4 1.0 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding CortBP2 PF09727.9 AID32897.1 - 0.0097 15.8 3.5 0.011 15.7 3.5 1.1 1 0 0 1 1 1 1 Cortactin-binding protein-2 Lipoprotein_20 PF13942.6 AID32897.1 - 0.019 14.9 1.1 0.023 14.6 1.1 1.1 1 0 0 1 1 1 0 YfhG lipoprotein DHR10 PF18595.1 AID32897.1 - 0.031 14.3 8.5 0.036 14.1 8.5 1.1 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain UPF0242 PF06785.11 AID32897.1 - 0.044 13.9 1.7 0.048 13.8 1.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 AID32897.1 - 0.051 14.0 1.5 0.87 10.0 1.1 2.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) TMF_DNA_bd PF12329.8 AID32897.1 - 0.065 13.2 3.6 0.49 10.4 2.5 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding FAM76 PF16046.5 AID32897.1 - 0.069 12.5 1.4 0.083 12.2 1.4 1.0 1 0 0 1 1 1 0 FAM76 protein Occludin_ELL PF07303.13 AID32897.1 - 0.087 13.6 0.7 0.12 13.1 0.7 1.3 1 1 0 1 1 1 0 Occludin homology domain APG6_N PF17675.1 AID32897.1 - 0.1 13.1 6.2 0.12 12.8 6.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Atg14 PF10186.9 AID32897.1 - 0.15 11.1 2.5 0.18 10.9 2.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1993 PF09351.10 AID32897.1 - 0.15 12.2 1.0 0.59 10.3 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1993) DUF4407 PF14362.6 AID32897.1 - 0.22 10.9 4.0 0.28 10.5 4.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ABC_tran_CTD PF16326.5 AID32897.1 - 0.32 11.3 6.6 0.59 10.4 5.7 1.8 1 1 1 2 2 2 0 ABC transporter C-terminal domain XhlA PF10779.9 AID32897.1 - 0.76 10.0 4.0 4.9 7.4 1.1 2.1 1 1 1 2 2 2 0 Haemolysin XhlA Spc24 PF08286.11 AID32897.1 - 1.2 9.4 4.7 1.8 8.9 4.7 1.5 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Transketolase_N PF00456.21 AID32898.1 - 3.2e-137 457.0 0.0 4.2e-137 456.6 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 AID32898.1 - 9.3e-45 152.5 0.0 1.9e-44 151.5 0.0 1.5 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID32898.1 - 3.6e-10 39.8 0.0 7.5e-10 38.8 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain E1_dh PF00676.20 AID32898.1 - 4.4e-07 29.1 0.1 6.9e-07 28.5 0.1 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 AID32898.1 - 0.00039 20.2 0.8 0.013 15.3 0.8 2.8 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 AID32898.1 - 0.00059 19.1 0.1 0.0036 16.6 0.1 2.0 1 1 1 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Gp_dh_C PF02800.20 AID32899.1 - 4.3e-62 208.4 0.1 5.9e-62 207.9 0.1 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 AID32899.1 - 3.8e-37 126.7 0.0 8.1e-37 125.6 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 AID32899.1 - 0.0028 17.8 0.1 0.0086 16.2 0.1 1.9 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 AID32899.1 - 0.0034 18.0 0.1 0.0093 16.6 0.1 1.7 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 AID32899.1 - 0.047 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase F420_oxidored PF03807.17 AID32899.1 - 0.099 13.2 0.5 0.76 10.4 0.5 2.3 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 AID32899.1 - 0.13 13.0 0.8 0.33 11.8 0.1 2.2 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Na_H_Exchanger PF00999.21 AID32900.1 - 1.9e-45 155.3 48.6 4.3e-45 154.1 48.5 1.5 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family CorC_HlyC PF03471.17 AID32900.1 - 0.0016 18.4 0.0 0.0029 17.6 0.0 1.4 1 0 0 1 1 1 1 Transporter associated domain Corona_5a PF06336.11 AID32900.1 - 0.046 13.7 0.2 0.14 12.1 0.2 1.8 1 0 0 1 1 1 0 Coronavirus 5a protein PGK PF00162.19 AID32901.1 - 8.6e-143 475.8 0.4 9.7e-143 475.7 0.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Glycolytic PF00274.19 AID32902.1 - 5.6e-138 459.4 0.0 6.4e-138 459.2 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I UPF0688 PF15772.5 AID32902.1 - 0.09 13.0 0.1 0.19 12.0 0.1 1.4 1 0 0 1 1 1 0 UPF0688 family DUF899 PF05988.12 AID32903.1 - 3.7e-88 294.6 0.2 4.2e-88 294.5 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) Lipase_GDSL_2 PF13472.6 AID32904.1 - 3.5e-18 66.6 0.0 6e-18 65.9 0.0 1.4 2 0 0 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID32904.1 - 1.4e-08 35.0 0.0 5.8e-08 32.9 0.0 1.9 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Form-deh_trans PF09163.11 AID32905.1 - 3.6 7.4 8.5 8.5 6.2 1.4 2.5 2 1 0 2 2 2 0 Formate dehydrogenase N, transmembrane Glyoxalase PF00903.25 AID32906.1 - 9.3e-30 103.5 0.1 1.4e-15 57.6 0.0 2.2 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID32906.1 - 4.6e-06 26.9 0.1 1.9e-05 24.9 0.0 1.9 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UBM PF14377.6 AID32907.1 - 0.042 13.3 0.0 0.078 12.5 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin binding region DJ-1_PfpI PF01965.24 AID32908.1 - 6e-18 65.2 0.0 7.1e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family WYL PF13280.6 AID32910.1 - 1.4e-18 67.6 0.1 2.3e-18 66.8 0.1 1.3 1 0 0 1 1 1 1 WYL domain HTH_11 PF08279.12 AID32910.1 - 1.5e-15 56.9 0.0 2.3e-15 56.2 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_DeoR PF08220.12 AID32910.1 - 0.00012 21.8 0.1 0.0013 18.4 0.0 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain DUF1013 PF06242.11 AID32911.1 - 1.4e-66 222.7 0.3 2.3e-66 222.1 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1013) HTH_23 PF13384.6 AID32911.1 - 0.00022 20.9 0.0 0.076 12.8 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 AID32911.1 - 0.01 15.2 0.1 0.32 10.4 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 DUF1127 PF06568.11 AID32912.1 - 4.9e-16 58.1 0.7 6.3e-16 57.8 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) ADH_zinc_N PF00107.26 AID32913.1 - 1.8e-27 95.9 2.2 2.9e-27 95.2 2.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID32913.1 - 3.9e-22 79.7 0.5 6.3e-22 79.1 0.5 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 AID32913.1 - 1.7e-10 40.7 0.2 7.9e-09 35.4 0.0 3.0 3 1 1 4 4 4 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 AID32913.1 - 0.028 13.9 1.1 0.37 10.2 0.3 2.2 2 0 0 2 2 2 0 short chain dehydrogenase EIIA-man PF03610.16 AID32913.1 - 0.072 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 PTS system fructose IIA component ADH_N_2 PF16884.5 AID32913.1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase DUF1192 PF06698.11 AID32914.1 - 3.5e-24 84.6 2.4 3.9e-24 84.5 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1192) MFS_1 PF07690.16 AID32915.1 - 1.6e-23 83.2 49.2 3.8e-16 59.0 20.3 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID32915.1 - 0.00083 18.3 26.4 0.0025 16.8 12.7 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID32915.1 - 0.073 11.9 22.7 0.092 11.6 6.3 2.0 1 1 1 2 2 2 0 MFS_1 like family UNC-93 PF05978.16 AID32915.1 - 0.46 10.2 10.4 0.028 14.1 4.5 1.9 2 0 0 2 2 2 0 Ion channel regulatory protein UNC-93 YqhR PF11085.8 AID32915.1 - 6.6 6.6 7.0 4.2 7.3 0.4 2.6 2 1 0 2 2 2 0 Conserved membrane protein YqhR HTH_5 PF01022.20 AID32916.1 - 1.2e-15 57.1 0.0 1.6e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID32916.1 - 2e-14 53.4 0.1 2.5e-14 53.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID32916.1 - 4.1e-10 39.4 0.1 5e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID32916.1 - 4.4e-07 29.7 0.0 5.5e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID32916.1 - 2.8e-05 23.6 0.0 4e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 AID32916.1 - 0.00023 21.0 0.0 0.00031 20.6 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 AID32916.1 - 0.00034 20.5 0.0 0.00039 20.3 0.0 1.1 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 AID32916.1 - 0.0024 18.0 0.0 0.0035 17.5 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HxlR PF01638.17 AID32916.1 - 0.0035 17.2 0.0 0.0042 16.9 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.10 AID32916.1 - 0.0051 16.6 0.3 0.0092 15.8 0.1 1.5 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 AID32916.1 - 0.0051 16.7 0.0 0.006 16.5 0.0 1.2 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 AID32916.1 - 0.022 15.1 0.0 0.028 14.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 AID32916.1 - 0.026 14.6 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF742 PF05331.11 AID32916.1 - 0.072 12.9 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF742) TyrRSs_C PF16714.5 AID32916.1 - 0.076 12.8 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain GntR PF00392.21 AID32916.1 - 0.098 12.3 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4423 PF14394.6 AID32916.1 - 0.1 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) RepL PF05732.11 AID32916.1 - 0.22 11.0 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) AHSA1 PF08327.11 AID32917.1 - 3.7e-20 72.4 0.0 4.3e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID32917.1 - 0.02 15.2 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DUF3108 PF11306.8 AID32917.1 - 0.075 13.0 0.1 0.18 11.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3108) AHSA1 PF08327.11 AID32918.1 - 8.6e-17 61.5 0.0 1.1e-16 61.2 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 AID32918.1 - 1.2e-11 45.1 0.0 1.4e-11 44.8 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport HTH_5 PF01022.20 AID32919.1 - 0.012 15.5 0.2 0.019 14.8 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 AID32919.1 - 0.018 15.1 0.1 0.029 14.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 AID32919.1 - 0.026 14.4 0.1 0.051 13.5 0.1 1.5 1 1 0 1 1 1 0 MarR family DUF2300 PF10062.9 AID32919.1 - 0.029 14.5 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2300) Cdc6_C PF09079.11 AID32919.1 - 0.054 13.5 0.0 0.071 13.1 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain GST_C PF00043.25 AID32920.1 - 1.9e-13 50.4 0.0 2.9e-13 49.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 AID32920.1 - 2.6e-13 50.2 0.0 4.5e-13 49.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID32920.1 - 1.3e-08 35.1 0.0 2.6e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID32920.1 - 1.1e-07 31.7 0.0 2.5e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID32920.1 - 5.6e-06 26.6 0.0 9.5e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID32920.1 - 3.8e-05 23.8 0.0 5.5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 AID32920.1 - 0.13 13.0 0.0 0.21 12.3 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Tom37 PF10568.9 AID32920.1 - 0.17 12.2 0.0 0.28 11.5 0.0 1.3 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein Abhydrolase_1 PF00561.20 AID32921.1 - 2.9e-26 92.6 0.1 1.8e-17 63.8 0.1 2.0 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID32921.1 - 8.4e-20 71.1 0.1 1.3e-19 70.4 0.1 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID32921.1 - 4.7e-13 50.3 5.4 6.2e-13 49.9 5.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase_phd PF10503.9 AID32921.1 - 7.4e-06 25.6 1.4 8.1e-05 22.2 1.0 2.2 2 0 0 2 2 2 1 Esterase PHB depolymerase DUF2048 PF09752.9 AID32921.1 - 1.1e-05 24.7 2.2 2.9e-05 23.3 1.1 1.8 1 1 1 2 2 2 1 Abhydrolase domain containing 18 Abhydrolase_4 PF08386.10 AID32921.1 - 8.1e-05 22.7 0.0 0.00014 21.9 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Esterase PF00756.20 AID32921.1 - 0.00039 20.1 0.0 0.00052 19.7 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Thioesterase PF00975.20 AID32921.1 - 0.00078 19.6 0.0 0.0014 18.8 0.0 1.5 1 0 0 1 1 1 1 Thioesterase domain Ndr PF03096.14 AID32921.1 - 0.00089 18.0 0.0 0.0013 17.5 0.0 1.2 1 0 0 1 1 1 1 Ndr family Abhydrolase_5 PF12695.7 AID32921.1 - 0.0028 17.4 0.0 0.076 12.8 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 AID32921.1 - 0.004 17.0 0.0 0.27 11.0 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 AID32921.1 - 0.0074 15.8 0.1 0.85 9.1 0.0 2.3 2 0 0 2 2 2 1 Prolyl oligopeptidase family DLH PF01738.18 AID32921.1 - 0.045 13.3 0.0 6.2 6.3 0.0 2.2 2 0 0 2 2 2 0 Dienelactone hydrolase family FSH1 PF03959.13 AID32921.1 - 0.073 12.7 0.1 0.16 11.6 0.0 1.5 2 0 0 2 2 2 0 Serine hydrolase (FSH1) HxlR PF01638.17 AID32922.1 - 1.3e-15 57.0 0.0 2e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Replic_Relax PF13814.6 AID32922.1 - 0.074 13.1 0.0 0.091 12.8 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation Ntox3 PF15536.6 AID32923.1 - 0.084 12.9 1.1 0.1 12.6 1.1 1.1 1 0 0 1 1 1 0 Bacterial toxin 3 Haem_degrading PF03928.14 AID32924.1 - 3.4e-25 88.4 0.8 3.8e-25 88.2 0.8 1.0 1 0 0 1 1 1 1 Haem-degrading DUF973 PF06157.11 AID32925.1 - 0.21 10.6 5.7 0.26 10.3 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) Arginase PF00491.21 AID32926.1 - 1.8e-58 198.3 1.5 2.1e-58 198.0 1.5 1.0 1 0 0 1 1 1 1 Arginase family Glyco_hydro_115 PF15979.5 AID32926.1 - 0.19 11.2 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 115 BPD_transp_1 PF00528.22 AID32928.1 - 9.6e-18 64.6 16.5 1.3e-17 64.1 16.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.20 AID32929.1 - 7.7e-46 156.3 0.1 9.2e-46 156.1 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 AID32929.1 - 2.8e-08 33.7 0.0 6.6e-05 22.6 0.0 2.1 1 1 1 2 2 2 2 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 AID32929.1 - 0.00066 19.7 0.1 0.0025 17.8 0.1 1.7 1 1 1 2 2 2 1 NMT1/THI5 like NMT1_2 PF13379.6 AID32929.1 - 0.015 15.0 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 NMT1-like family AsnC_trans_reg PF01037.21 AID32930.1 - 2.4e-12 46.6 0.0 4.5e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID32930.1 - 2.1e-08 33.9 0.5 3.7e-08 33.1 0.5 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID32930.1 - 2.1e-07 30.4 0.0 3.4e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 AID32930.1 - 0.00018 21.0 0.1 0.00031 20.2 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.12 AID32930.1 - 0.0014 18.5 0.1 0.0025 17.7 0.1 1.4 1 0 0 1 1 1 1 HTH domain Put_DNA-bind_N PF06971.13 AID32930.1 - 0.0016 18.4 0.2 0.003 17.5 0.2 1.4 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus Sigma70_r4_2 PF08281.12 AID32930.1 - 0.0016 18.1 0.1 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_20 PF12840.7 AID32930.1 - 0.0016 18.4 0.0 0.0029 17.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 AID32930.1 - 0.002 17.9 0.0 0.0038 17.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_47 PF16221.5 AID32930.1 - 0.014 15.0 0.0 0.08 12.5 0.0 1.9 2 0 0 2 2 2 0 winged helix-turn-helix HTH_Tnp_ISL3 PF13542.6 AID32930.1 - 0.019 14.3 0.2 0.038 13.4 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_7 PF02796.15 AID32930.1 - 0.025 14.6 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_DeoR PF08220.12 AID32930.1 - 0.034 13.9 0.1 0.061 13.1 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain MarR PF01047.22 AID32930.1 - 0.035 14.0 0.0 0.076 13.0 0.0 1.6 1 0 0 1 1 1 0 MarR family GerE PF00196.19 AID32930.1 - 0.041 13.4 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 AID32930.1 - 0.062 13.1 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_50 PF18024.1 AID32930.1 - 0.084 12.5 0.0 0.22 11.2 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID32930.1 - 0.087 12.8 0.0 0.36 10.9 0.1 1.8 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Ribosomal_L32p PF01783.23 AID32931.1 - 1.8e-23 82.6 0.4 1.9e-23 82.4 0.4 1.0 1 0 0 1 1 1 1 Ribosomal L32p protein family Transgly PF00912.22 AID32932.1 - 8.3e-45 152.4 0.0 1.1e-44 152.0 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase polyprenyl_synt PF00348.17 AID32933.1 - 2.7e-53 180.7 0.1 3.3e-53 180.4 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase DUF2600 PF10776.9 AID32933.1 - 0.18 10.6 0.0 0.3 9.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) adh_short_C2 PF13561.6 AID32934.1 - 6e-59 199.4 0.3 7.3e-59 199.1 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID32934.1 - 5.9e-52 176.0 0.1 7e-52 175.7 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID32934.1 - 9.3e-10 38.7 0.3 1.5e-09 38.0 0.3 1.3 1 0 0 1 1 1 1 KR domain F420_oxidored PF03807.17 AID32934.1 - 0.0056 17.2 1.2 0.11 13.1 0.1 2.8 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent DUF1776 PF08643.10 AID32934.1 - 0.0063 15.9 0.0 0.0082 15.5 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) NAD_binding_10 PF13460.6 AID32934.1 - 0.041 13.8 0.8 0.065 13.1 0.5 1.4 1 1 0 1 1 1 0 NAD(P)H-binding Epimerase PF01370.21 AID32934.1 - 0.12 11.9 0.2 0.4 10.1 0.2 2.0 2 1 0 2 2 2 0 NAD dependent epimerase/dehydratase family DNA_pol3_finger PF17657.1 AID32934.1 - 0.2 11.0 0.0 0.3 10.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain Response_reg PF00072.24 AID32935.1 - 6.7e-45 151.9 0.0 2.6e-23 82.3 0.0 2.4 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 AID32935.1 - 1.1e-31 109.6 0.1 2.1e-31 108.8 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID32935.1 - 1.5e-20 73.0 0.1 5.2e-20 71.3 0.0 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID32935.1 - 0.0073 16.1 0.1 0.024 14.5 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Methyltransf_25 PF13649.6 AID32936.1 - 9.4e-20 71.1 0.2 1.4e-19 70.5 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID32936.1 - 5.4e-18 65.4 0.1 7.8e-18 64.9 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID32936.1 - 7.4e-14 51.9 0.0 1.3e-13 51.1 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID32936.1 - 6.9e-13 49.2 0.3 1.6e-12 48.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID32936.1 - 3.8e-12 46.3 0.0 4.8e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 AID32936.1 - 6e-09 35.8 0.0 8.1e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 AID32936.1 - 5.2e-08 32.5 0.0 8.7e-06 25.2 0.0 2.1 2 0 0 2 2 2 2 ubiE/COQ5 methyltransferase family MTS PF05175.14 AID32936.1 - 0.00013 21.6 0.0 0.00021 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 AID32936.1 - 0.00021 20.9 0.1 0.0003 20.4 0.1 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.14 AID32936.1 - 0.001 18.5 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.19 AID32936.1 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 AID32936.1 - 0.14 11.6 0.0 1.6 8.2 0.0 2.0 2 0 0 2 2 2 0 Putative methyltransferase PrmA PF06325.13 AID32936.1 - 0.2 11.0 0.1 0.31 10.4 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 AID32936.1 - 0.22 10.8 0.1 0.31 10.3 0.1 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Sulphotransf PF09037.10 AID32937.1 - 2.3e-106 354.8 0.0 2.6e-106 354.6 0.0 1.0 1 0 0 1 1 1 1 Stf0 sulphotransferase Sulfotransfer_3 PF13469.6 AID32937.1 - 1.1e-09 39.0 0.0 1.5e-07 32.0 0.0 2.3 1 1 0 1 1 1 1 Sulfotransferase family Sulfotransfer_1 PF00685.27 AID32937.1 - 0.01 15.4 0.0 0.27 10.7 0.0 2.1 2 0 0 2 2 2 0 Sulfotransferase domain AAA_18 PF13238.6 AID32937.1 - 0.037 14.6 0.0 0.056 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain CPT PF07931.12 AID32938.1 - 6.6e-68 227.9 0.0 7.4e-68 227.8 0.0 1.0 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_33 PF13671.6 AID32938.1 - 0.00025 21.2 0.0 0.00051 20.2 0.0 1.5 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 AID32938.1 - 0.00099 18.4 0.0 0.0018 17.6 0.0 1.7 1 1 0 1 1 1 1 Zeta toxin AAA_18 PF13238.6 AID32938.1 - 0.0076 16.8 0.0 0.04 14.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID32938.1 - 0.084 13.2 0.0 0.13 12.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain SLT PF01464.20 AID32939.1 - 1.1e-22 79.8 0.0 1.7e-22 79.3 0.0 1.2 1 0 0 1 1 1 1 Transglycosylase SLT domain SPOR PF05036.13 AID32939.1 - 3.3e-07 30.6 0.2 6.5e-07 29.6 0.2 1.5 1 0 0 1 1 1 1 Sporulation related domain GcpE PF04551.14 AID32940.1 - 5.1e-110 367.9 0.1 6.1e-110 367.6 0.1 1.0 1 0 0 1 1 1 1 GcpE protein DUF465 PF04325.13 AID32941.1 - 1.4e-13 50.6 6.1 1.6e-13 50.4 6.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF465) DivIC PF04977.15 AID32941.1 - 0.28 11.0 2.0 9.1 6.1 0.6 2.0 1 1 1 2 2 2 0 Septum formation initiator DUF465 PF04325.13 AID32942.1 - 2.9e-13 49.6 1.4 3.9e-13 49.2 1.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF465) DUF4211 PF13926.6 AID32942.1 - 0.05 13.7 0.3 0.056 13.5 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) IclR PF01614.18 AID32943.1 - 3.6e-12 46.2 0.0 7.2e-12 45.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 AID32943.1 - 1.5e-09 37.5 0.7 4.4e-09 36.0 0.1 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 AID32943.1 - 0.00049 19.9 0.0 0.0022 17.9 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID32943.1 - 0.0062 16.1 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 AID32943.1 - 0.074 13.0 0.1 0.17 11.8 0.1 1.6 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 AID32943.1 - 0.081 13.0 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 AID32943.1 - 0.12 12.3 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 MarR family SBP_bac_3 PF00497.20 AID32944.1 - 1e-39 136.3 0.2 1.2e-39 136.0 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID32944.1 - 3.6e-05 23.9 0.0 7.9e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site HrpA_pilin PF09589.10 AID32944.1 - 0.11 13.2 0.4 0.11 13.2 0.4 2.0 2 0 0 2 2 2 0 HrpA pilus formation protein BPD_transp_1 PF00528.22 AID32945.1 - 8.9e-22 77.7 15.4 1.1e-21 77.4 15.4 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID32946.1 - 8.1e-19 68.1 13.3 8.1e-19 68.1 13.3 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID32947.1 - 1.5e-33 116.2 0.0 2e-33 115.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32947.1 - 4.9e-10 39.7 0.0 0.00044 20.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32947.1 - 2.1e-08 33.9 0.1 3.8e-07 29.8 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID32947.1 - 7e-05 23.1 0.2 0.0013 19.0 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID32947.1 - 0.00017 22.1 0.6 0.00027 21.3 0.6 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID32947.1 - 0.0011 18.7 0.1 0.003 17.3 0.0 1.7 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA PF00004.29 AID32947.1 - 0.0022 18.4 0.0 0.64 10.5 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID32947.1 - 0.005 17.0 0.0 0.011 15.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 AID32947.1 - 0.0055 15.6 0.1 1.2 7.8 0.0 2.4 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_5 PF07728.14 AID32947.1 - 0.0095 15.9 0.1 4.4 7.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) TniB PF05621.11 AID32947.1 - 0.0096 15.3 0.0 2 7.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 AID32947.1 - 0.011 15.5 0.2 0.088 12.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID32947.1 - 0.015 15.8 0.0 0.022 15.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID32947.1 - 0.039 13.9 0.1 0.078 12.9 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 AID32947.1 - 0.045 13.3 0.3 0.23 11.0 0.0 2.1 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 AID32947.1 - 0.048 13.6 0.0 0.099 12.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 AID32947.1 - 0.058 13.3 0.0 0.12 12.3 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 AID32947.1 - 0.06 12.7 0.0 1.4 8.3 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 AID32947.1 - 0.062 12.4 0.0 0.093 11.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.6 AID32947.1 - 0.062 13.3 0.0 1.5 8.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 AID32947.1 - 0.064 12.4 0.0 0.23 10.6 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain AAA_19 PF13245.6 AID32947.1 - 0.074 13.4 0.0 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 AID32947.1 - 0.079 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 AID32947.1 - 0.1 12.2 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 AID32947.1 - 0.11 11.9 0.1 2.8 7.2 0.0 2.2 2 0 0 2 2 2 0 KaiC IstB_IS21 PF01695.17 AID32947.1 - 0.14 11.9 0.0 1 9.1 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein YjgF_endoribonc PF14588.6 AID32948.1 - 4.6e-28 98.2 0.0 5e-28 98.1 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 AID32948.1 - 5.8e-17 61.8 0.0 8e-17 61.4 0.0 1.2 1 0 0 1 1 1 1 Endoribonuclease L-PSP SelA PF03841.13 AID32949.1 - 2.2e-16 59.8 1.0 1.2e-14 54.1 2.5 2.7 2 1 0 2 2 2 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 AID32949.1 - 3.8e-08 32.3 0.2 5.4e-07 28.5 0.2 2.0 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID32949.1 - 6.9e-07 28.5 0.1 2.1e-06 26.9 0.1 1.7 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AID32949.1 - 4.4e-05 22.9 0.3 0.00017 21.0 0.3 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 AID32949.1 - 0.0067 15.8 0.2 0.017 14.5 0.2 1.8 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Sigma70_r2 PF04542.14 AID32951.1 - 7.5e-14 51.3 0.1 1.2e-13 50.6 0.1 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID32951.1 - 2.6e-13 49.4 0.1 4.2e-13 48.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID32951.1 - 1.4e-07 30.9 0.0 2.3e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 AID32951.1 - 0.041 13.5 0.0 0.09 12.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 AID32951.1 - 0.056 13.2 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain zf-HC2 PF13490.6 AID32952.1 - 0.036 14.3 0.3 0.071 13.4 0.3 1.6 1 0 0 1 1 1 0 Putative zinc-finger PG_isomerase_N PF18353.1 AID32952.1 - 0.085 13.3 0.3 0.21 12.0 0.0 1.8 2 0 0 2 2 2 0 Phosphoglucose isomerase N-terminal domain AIRC PF00731.20 AID32953.1 - 3.7e-62 208.3 1.9 4.1e-62 208.1 1.9 1.0 1 0 0 1 1 1 1 AIR carboxylase DUF166 PF02593.14 AID32953.1 - 0.16 11.5 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function ATP-grasp PF02222.22 AID32954.1 - 1.4e-52 177.7 0.0 2.2e-52 177.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 AID32954.1 - 1e-14 54.0 0.0 1.8e-14 53.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain 2-Hacid_dh_C PF02826.19 AID32954.1 - 0.00023 20.6 0.0 0.00048 19.5 0.0 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPSase_L_D2 PF02786.17 AID32954.1 - 0.00029 20.4 0.0 0.00048 19.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain F420_oxidored PF03807.17 AID32954.1 - 0.00073 20.1 0.3 0.0018 18.8 0.3 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent XdhC_C PF13478.6 AID32954.1 - 0.0013 19.2 0.7 0.0073 16.8 0.1 2.3 2 0 0 2 2 2 1 XdhC Rossmann domain DAO PF01266.24 AID32954.1 - 0.0016 18.1 0.5 0.002 17.8 0.5 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID32954.1 - 0.0077 16.1 0.2 0.013 15.4 0.2 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dala_Dala_lig_C PF07478.13 AID32954.1 - 0.0095 15.5 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Pyr_redox_2 PF07992.14 AID32954.1 - 0.014 14.6 0.1 0.022 14.0 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PALP PF00291.25 AID32954.1 - 0.02 14.3 1.2 0.037 13.4 1.2 1.5 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme NAD_binding_2 PF03446.15 AID32954.1 - 0.039 14.1 0.1 0.074 13.2 0.1 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox PF00070.27 AID32954.1 - 0.04 14.5 0.0 0.11 13.1 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 AID32954.1 - 0.043 14.1 0.0 0.51 10.6 0.0 2.3 1 1 0 2 2 2 0 TrkA-N domain LprI PF07007.12 AID32955.1 - 2.4e-23 82.8 3.3 3.6e-23 82.2 3.3 1.3 1 0 0 1 1 1 1 Lysozyme inhibitor LprI DUF4398 PF14346.6 AID32955.1 - 0.0012 19.4 0.6 0.002 18.7 0.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4398) Ribosomal_L36 PF00444.18 AID32956.1 - 1.1e-15 57.5 1.4 1.3e-15 57.3 1.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L36 SecA_PP_bind PF01043.20 AID32956.1 - 0.058 14.0 0.0 0.061 14.0 0.0 1.0 1 0 0 1 1 1 0 SecA preprotein cross-linking domain TPR_2 PF07719.17 AID32957.1 - 1.4e-11 43.5 0.0 0.0034 17.4 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 AID32957.1 - 7.4e-07 28.7 0.0 0.017 15.0 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 AID32957.1 - 3.2e-05 24.3 0.0 0.031 14.8 0.0 2.4 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 AID32957.1 - 0.00011 22.3 2.0 0.003 17.7 0.0 2.8 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 AID32957.1 - 0.0023 18.5 0.1 0.23 12.2 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 AID32957.1 - 0.0048 16.5 0.0 0.2 11.4 0.0 2.7 3 0 0 3 3 3 1 TPR repeat TPR_12 PF13424.6 AID32957.1 - 0.0056 16.9 0.0 0.044 14.1 0.0 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID32957.1 - 0.0083 16.9 0.3 1.9 9.5 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 AID32957.1 - 0.014 16.0 4.3 0.39 11.4 0.0 3.1 2 1 1 3 3 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 AID32957.1 - 0.023 15.0 0.0 2.4 8.7 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TraW_N PF12477.8 AID32957.1 - 0.38 10.8 2.2 0.39 10.7 0.6 1.9 2 0 0 2 2 2 0 Sex factor F TraW protein N terminal Abhydrolase_1 PF00561.20 AID32958.1 - 2.8e-15 56.7 0.1 9.9e-12 45.0 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID32958.1 - 2.8e-15 57.5 10.8 4e-15 57.0 10.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID32958.1 - 8.1e-13 48.2 0.1 1.8e-12 47.1 0.1 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 AID32958.1 - 0.00046 20.0 0.0 0.001 18.8 0.0 1.5 2 0 0 2 2 2 1 Alpha/beta hydrolase family Ndr PF03096.14 AID32958.1 - 0.019 13.7 0.0 0.032 13.0 0.0 1.3 1 0 0 1 1 1 0 Ndr family Ser_hydrolase PF06821.13 AID32958.1 - 0.051 13.4 0.0 0.28 11.0 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase UPF0227 PF05728.12 AID32958.1 - 0.056 13.4 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) FSH1 PF03959.13 AID32958.1 - 0.18 11.4 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) EHN PF06441.12 AID32958.1 - 0.19 12.1 0.8 0.49 10.8 0.0 1.9 2 0 0 2 2 2 0 Epoxide hydrolase N terminus PGAP1 PF07819.13 AID32958.1 - 0.28 10.9 0.3 0.62 9.7 0.0 1.6 2 0 0 2 2 2 0 PGAP1-like protein PK PF00224.21 AID32960.1 - 3.2e-107 358.4 0.2 4.3e-107 358.0 0.2 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 AID32960.1 - 8.1e-33 113.1 0.0 3.2e-32 111.2 0.0 2.0 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 AID32960.1 - 0.007 15.5 3.3 0.036 13.2 0.5 2.8 2 1 1 3 3 3 1 HpcH/HpaI aldolase/citrate lyase family IMPDH PF00478.25 AID32960.1 - 0.0078 15.3 0.8 0.023 13.7 0.0 1.9 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain DUF4253 PF14062.6 AID32960.1 - 0.078 13.2 0.2 3.5 7.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4253) DUF1036 PF06282.11 AID32961.1 - 3.8e-42 143.4 0.4 4.5e-42 143.2 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1036) FGase PF05013.12 AID32962.1 - 6.3e-43 147.5 0.2 7.5e-43 147.3 0.2 1.1 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase DUF1244 PF06844.11 AID32963.1 - 5e-35 119.5 0.7 5e-35 119.5 0.7 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1244) Terminase_4 PF05119.12 AID32963.1 - 0.0052 17.2 0.1 0.0065 16.9 0.1 1.3 1 1 0 1 1 1 1 Phage terminase, small subunit Helicase_C_2 PF13307.6 AID32963.1 - 0.099 12.8 0.0 0.12 12.5 0.0 1.3 1 1 0 1 1 1 0 Helicase C-terminal domain SnoaL_2 PF12680.7 AID32964.1 - 5.6e-05 23.7 0.0 0.0001 22.9 0.0 1.5 2 0 0 2 2 2 1 SnoaL-like domain SnoaL PF07366.12 AID32964.1 - 0.00011 22.1 0.0 0.00013 21.8 0.0 1.3 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase PHZA_PHZB PF03284.13 AID32964.1 - 0.00032 20.4 0.0 0.00038 20.1 0.0 1.1 1 0 0 1 1 1 1 Phenazine biosynthesis protein A/B MFS_1 PF07690.16 AID32965.1 - 1.8e-24 86.3 81.0 4.4e-19 68.6 42.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Phage_holin_2_2 PF10746.9 AID32965.1 - 3.6 7.3 6.5 1.2 8.9 0.8 3.0 2 1 1 3 3 3 0 Phage holin T7 family, holin superfamily II LysR_substrate PF03466.20 AID32966.1 - 2e-27 95.9 0.5 3.2e-27 95.3 0.5 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID32966.1 - 6.6e-20 70.8 1.5 1.4e-19 69.7 1.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 AID32966.1 - 0.045 13.6 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF3860 PF12976.7 AID32966.1 - 0.048 13.7 0.0 11 6.1 0.0 2.3 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3860) HTH_20 PF12840.7 AID32966.1 - 0.049 13.7 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF680 PF05079.12 AID32967.1 - 1.2e-10 41.9 2.2 1.9e-10 41.3 2.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF680) PepSY_2 PF13670.6 AID32967.1 - 0.012 15.6 1.0 0.017 15.1 1.0 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Epimerase PF01370.21 AID32968.1 - 5.7e-12 45.6 0.0 2.5e-11 43.5 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID32968.1 - 3.8e-11 43.2 0.0 3.1e-10 40.3 0.0 2.0 2 0 0 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 AID32968.1 - 8.6e-10 38.6 0.0 3.2e-09 36.7 0.0 2.0 1 1 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 AID32968.1 - 0.0039 16.3 0.0 0.88 8.6 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID32968.1 - 0.0058 15.7 0.0 0.046 12.7 0.0 2.0 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.20 AID32968.1 - 0.019 15.1 0.1 0.036 14.2 0.1 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus 3HCDH_N PF02737.18 AID32968.1 - 0.029 14.2 0.1 0.043 13.7 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COX5B PF01215.19 AID32968.1 - 0.19 11.4 0.0 0.36 10.5 0.0 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb DUF3309 PF11752.8 AID32969.1 - 5.7e-23 80.7 16.1 6.2e-23 80.6 16.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3309) SPT_ssu-like PF11779.8 AID32969.1 - 0.082 12.5 0.3 0.082 12.5 0.3 2.0 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like CBP_BcsF PF11120.8 AID32969.1 - 0.83 9.8 6.5 12 6.1 2.7 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF PDGLE PF13190.6 AID32969.1 - 1.2 9.1 5.9 3 7.8 5.9 1.7 1 1 0 1 1 1 0 PDGLE domain FeoB_associated PF12669.7 AID32969.1 - 9.2 6.8 8.2 14 6.2 0.3 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein ACR_tran PF00873.19 AID32970.1 - 4.4e-171 570.9 16.4 5.9e-171 570.5 16.4 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family HlyD_D23 PF16576.5 AID32971.1 - 2.1e-24 86.0 1.1 3.4e-24 85.3 1.1 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID32971.1 - 2.7e-22 79.5 1.4 2.4e-18 66.8 0.2 2.8 2 0 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID32971.1 - 1.8e-07 30.9 9.4 7.7e-06 25.6 0.1 3.8 4 0 0 4 4 4 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID32971.1 - 6.2e-07 29.2 3.3 0.081 12.8 0.1 3.8 4 0 0 4 4 4 2 Biotin-requiring enzyme OEP PF02321.18 AID32971.1 - 0.27 11.0 6.4 0.44 10.3 6.4 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein Cytochrome_C7 PF14522.6 AID32973.1 - 0.0062 16.5 0.6 0.023 14.7 0.6 1.8 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Haem_bd PF14376.6 AID32973.1 - 0.12 12.3 0.4 0.31 11.0 0.0 1.8 2 0 0 2 2 2 0 Haem-binding domain Ald_Xan_dh_C2 PF02738.18 AID32974.1 - 1.6e-63 215.0 8.0 2e-43 148.7 0.1 4.1 3 1 1 4 4 4 4 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID32974.1 - 0.0019 18.5 0.0 0.059 13.7 0.0 2.6 1 1 1 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TAT_signal PF10518.9 AID32974.1 - 0.16 11.9 14.6 0.43 10.5 1.5 3.4 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence TetR_N PF00440.23 AID32975.1 - 6.4e-17 61.1 0.0 1.4e-16 60.0 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family DUF1937 PF09152.10 AID32975.1 - 0.062 14.1 0.2 0.1 13.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1937) HTH_AraC PF00165.23 AID32975.1 - 0.16 12.1 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Fer2_2 PF01799.20 AID32976.1 - 1.5e-30 105.0 0.1 1.5e-30 105.0 0.1 1.7 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID32976.1 - 2.4e-06 27.4 0.0 2.4e-06 27.4 0.0 1.8 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID32976.1 - 8.3e-06 25.8 0.1 2.7e-05 24.1 0.0 1.8 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 AID32976.1 - 0.0027 17.7 0.4 0.013 15.5 0.2 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DHODB_Fe-S_bind PF10418.9 AID32976.1 - 0.01 15.6 2.8 0.01 15.6 2.8 1.9 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PPR_1 PF12854.7 AID32976.1 - 0.012 15.3 0.0 0.012 15.3 0.0 1.7 2 0 0 2 2 2 0 PPR repeat Patatin PF01734.22 AID32977.1 - 1.2e-14 55.0 3.6 6.8e-14 52.5 3.6 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase Citrate_synt PF00285.21 AID32978.1 - 4.1e-90 302.5 0.0 4.9e-90 302.2 0.0 1.1 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Citrate_synt PF00285.21 AID32979.1 - 2.2e-63 214.5 0.8 1.2e-56 192.4 1.6 2.1 2 0 0 2 2 2 2 Citrate synthase, C-terminal domain HTH_17 PF12728.7 AID32979.1 - 0.0005 20.2 0.2 0.0015 18.7 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain MerR_1 PF13411.6 AID32979.1 - 0.14 12.3 0.2 0.3 11.2 0.2 1.5 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_18 PF12833.7 AID32980.1 - 8e-21 74.1 4.7 1.3e-20 73.4 4.7 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 AID32980.1 - 8.8e-18 64.6 0.0 1.2e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 AID32980.1 - 3.2e-13 49.4 0.0 1.6e-06 28.0 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Rhodanese PF00581.20 AID32981.1 - 3.3e-08 34.0 0.0 5.3e-08 33.3 0.0 1.4 1 1 0 1 1 1 1 Rhodanese-like domain PHB_acc_N PF07879.11 AID32982.1 - 8.1e-30 102.7 0.6 1.3e-29 102.1 0.6 1.3 1 0 0 1 1 1 1 PHB/PHA accumulation regulator DNA-binding domain PHB_acc PF05233.13 AID32982.1 - 5.2e-17 61.6 2.0 5.2e-17 61.6 2.0 2.4 4 0 0 4 4 4 1 PHB accumulation regulatory domain DUF3138 PF11336.8 AID32982.1 - 0.016 13.8 0.0 0.02 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) E2_bind PF08825.10 AID32982.1 - 0.11 12.7 4.8 3.1 8.0 0.0 3.2 3 2 0 3 3 3 0 E2 binding domain Thiolase_N PF00108.23 AID32983.1 - 2.1e-103 345.3 7.3 2.7e-103 344.9 7.3 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID32983.1 - 1.3e-50 170.2 6.6 3.1e-50 168.9 1.1 2.9 2 1 1 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 AID32983.1 - 0.00016 21.3 5.7 0.001 18.7 0.7 3.1 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain B12-binding PF02310.19 AID32983.1 - 0.031 14.3 0.1 6.6 6.8 0.1 2.9 2 1 0 2 2 2 0 B12 binding domain DUF348 PF03990.14 AID32983.1 - 0.075 12.8 0.6 12 5.7 0.0 2.6 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain adh_short PF00106.25 AID32984.1 - 8.3e-54 182.0 3.1 9.4e-54 181.8 3.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID32984.1 - 1.2e-42 146.0 0.7 1.6e-42 145.7 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID32984.1 - 3.5e-15 56.4 1.7 6.2e-15 55.6 1.7 1.3 1 1 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 AID32984.1 - 0.024 14.5 0.7 0.034 14.0 0.7 1.3 1 1 0 1 1 1 0 NAD(P)H-binding Epimerase PF01370.21 AID32984.1 - 0.055 12.9 0.0 0.082 12.3 0.0 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Helicase_C PF00271.31 AID32985.1 - 1.7e-09 38.0 0.0 3.3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain S4 PF01479.25 AID32987.1 - 4.2e-11 42.4 0.3 6.8e-11 41.7 0.3 1.4 1 0 0 1 1 1 1 S4 domain DUF3851 PF12962.7 AID32987.1 - 0.15 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3851) DUF3470 PF11953.8 AID32988.1 - 6.5e-19 67.6 2.4 9.5e-19 67.1 2.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3470) Fer4 PF00037.27 AID32988.1 - 1e-09 37.8 21.8 1.7e-07 30.8 6.3 3.1 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_16 PF13484.6 AID32988.1 - 6.3e-08 33.4 9.3 2.4e-05 25.2 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 AID32988.1 - 1.3e-07 31.6 23.3 0.00015 21.8 14.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID32988.1 - 1.4e-07 31.6 24.4 3.3e-05 24.0 14.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID32988.1 - 5e-06 27.0 16.1 4.1e-05 24.1 16.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 AID32988.1 - 6e-06 26.1 19.0 0.00056 19.9 5.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AID32988.1 - 1.2e-05 25.1 13.2 0.011 15.8 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 AID32988.1 - 0.0001 22.4 16.9 0.0056 16.8 2.5 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID32988.1 - 0.00013 22.3 6.2 0.0057 17.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 AID32988.1 - 0.00041 20.6 15.1 0.00089 19.6 1.8 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.6 AID32988.1 - 0.0024 18.3 12.5 0.029 14.9 2.6 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 AID32988.1 - 3.1 8.9 19.3 3.6 8.7 6.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain CarD_CdnL_TRCF PF02559.16 AID32989.1 - 1.5e-18 67.3 1.2 1.6e-18 67.2 0.3 1.5 2 0 0 2 2 2 1 CarD-like/TRCF domain CDC24_OB3 PF17244.2 AID32989.1 - 0.054 13.2 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 ABC_tran PF00005.27 AID32990.1 - 1.3e-33 116.4 0.0 2.3e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32990.1 - 8.3e-12 45.5 0.0 2.6e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID32990.1 - 0.00013 21.5 0.2 0.24 10.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32990.1 - 0.00014 21.6 0.1 0.00028 20.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID32990.1 - 0.0023 18.5 0.1 0.0043 17.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID32990.1 - 0.0043 17.0 0.1 0.0084 16.0 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 AID32990.1 - 0.0087 16.5 1.2 0.044 14.2 1.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 AID32990.1 - 0.011 14.6 0.4 0.62 8.8 0.3 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_22 PF13401.6 AID32990.1 - 0.013 15.8 0.3 0.15 12.3 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID32990.1 - 0.016 14.8 1.4 0.074 12.6 0.2 2.3 2 1 0 2 2 2 0 AAA domain Band_7_C PF16200.5 AID32990.1 - 0.022 14.8 0.0 0.048 13.7 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of band_7 AAA_15 PF13175.6 AID32990.1 - 0.022 14.5 0.0 1.5 8.5 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Mg_chelatase PF01078.21 AID32990.1 - 0.13 11.7 0.1 0.43 9.9 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 AID32990.1 - 0.15 12.3 0.6 4.5 7.5 0.2 2.6 2 1 1 3 3 3 0 AAA domain BPD_transp_1 PF00528.22 AID32991.1 - 7.9e-22 77.9 12.5 7.9e-22 77.9 12.5 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.20 AID32992.1 - 9.5e-65 218.2 3.3 1.1e-64 217.9 3.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 AID32992.1 - 1.2e-06 28.4 1.0 2.8e-05 23.9 1.0 2.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Lig_chan-Glu_bd PF10613.9 AID32992.1 - 2e-06 28.0 0.0 6.1e-06 26.4 0.0 1.9 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 AID32992.1 - 0.018 15.0 0.2 0.052 13.5 0.2 1.8 1 1 0 1 1 1 0 NMT1/THI5 like ADH_zinc_N PF00107.26 AID32992.1 - 0.13 12.3 0.9 0.51 10.3 0.1 2.0 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Sigma70_r2 PF04542.14 AID32993.1 - 1.3e-17 63.4 0.1 2.8e-17 62.2 0.1 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID32993.1 - 5.2e-16 57.9 4.6 7.2e-16 57.4 3.0 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 AID32993.1 - 0.036 13.9 1.2 0.29 11.0 0.1 2.8 3 0 0 3 3 3 0 Homeodomain-like domain HTH_10 PF04967.12 AID32993.1 - 0.066 13.0 0.2 0.45 10.4 0.1 2.3 2 0 0 2 2 2 0 HTH DNA binding domain HTH_WhiA PF02650.14 AID32993.1 - 0.093 13.1 0.2 1.5 9.2 0.1 2.2 2 0 0 2 2 2 0 WhiA C-terminal HTH domain Sigma70_r4_2 PF08281.12 AID32993.1 - 1.1 9.0 4.8 5.7 6.7 2.2 2.5 2 1 0 2 2 2 0 Sigma-70, region 4 Peptidase_M48 PF01435.18 AID32994.1 - 1e-29 103.8 0.0 1.9e-29 102.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M48 DUF2268 PF10026.9 AID32994.1 - 0.01 15.4 0.0 0.018 14.6 0.0 1.4 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) ABC_tran PF00005.27 AID32995.1 - 1e-31 110.3 0.0 1.5e-31 109.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID32995.1 - 6.3e-10 39.3 0.5 9.4e-06 25.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID32995.1 - 2.8e-05 24.6 0.1 4e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID32995.1 - 5e-05 22.8 0.0 0.00027 20.4 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32995.1 - 9.7e-05 22.0 0.0 0.00018 21.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID32995.1 - 0.00025 21.0 0.0 0.00044 20.2 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID32995.1 - 0.0012 19.3 0.1 0.0031 18.1 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID32995.1 - 0.0023 18.2 0.1 0.012 15.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID32995.1 - 0.0025 17.6 0.5 0.0076 16.0 0.5 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID32995.1 - 0.029 14.5 0.1 0.15 12.3 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID32995.1 - 0.07 12.7 0.8 0.13 11.8 0.2 1.8 2 1 0 2 2 2 0 AAA domain ATPase PF06745.13 AID32995.1 - 0.083 12.2 0.0 13 5.0 0.0 2.1 2 0 0 2 2 2 0 KaiC MMR_HSR1 PF01926.23 AID32995.1 - 0.092 12.8 0.2 0.21 11.7 0.1 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase cobW PF02492.19 AID32995.1 - 0.17 11.5 0.1 0.31 10.6 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 AID32995.1 - 0.17 12.1 0.6 0.98 9.6 0.2 2.3 3 0 0 3 3 3 0 AAA domain SbcCD_C PF13558.6 AID32995.1 - 0.22 11.8 1.4 7 7.0 0.3 3.1 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.22 AID32996.1 - 4.6e-16 59.1 36.1 3.2e-10 40.0 7.0 3.9 2 2 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 AID32997.1 - 1.8e-23 83.2 0.7 2.4e-23 82.9 0.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID32997.1 - 4.9e-16 59.6 4.6 7.8e-16 58.9 4.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID32997.1 - 6.5e-12 45.7 0.1 8.9e-12 45.2 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TPK_catalytic PF04263.16 AID32998.1 - 2.3e-11 43.8 0.0 4.1e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain TPK_B1_binding PF04265.14 AID32998.1 - 1.4e-08 34.3 0.0 2.2e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain ABC_tran PF00005.27 AID32999.1 - 6.8e-51 172.4 0.0 3e-24 86.1 0.0 2.8 3 0 0 3 3 2 2 ABC transporter AAA_21 PF13304.6 AID32999.1 - 2.9e-19 70.0 10.6 0.00015 21.7 0.1 4.3 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_CTD PF16326.5 AID32999.1 - 1.4e-15 57.2 3.7 1.4e-15 57.2 3.7 2.0 2 0 0 2 2 1 1 ABC transporter C-terminal domain SMC_N PF02463.19 AID32999.1 - 2.6e-13 49.9 0.1 0.0052 16.3 0.0 4.2 3 1 0 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID32999.1 - 1.7e-07 30.8 0.9 0.0042 16.8 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 AID32999.1 - 2.3e-07 30.7 0.3 0.0053 16.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 AID32999.1 - 6.9e-07 29.6 1.6 0.0046 17.2 0.7 3.3 2 2 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 AID32999.1 - 1e-06 28.8 0.0 0.012 15.7 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_16 PF13191.6 AID32999.1 - 1.6e-06 28.6 3.3 0.0008 19.8 0.1 3.0 3 1 0 3 3 2 2 AAA ATPase domain AAA_23 PF13476.6 AID32999.1 - 4.4e-06 27.3 4.9 0.022 15.3 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.6 AID32999.1 - 7.3e-06 26.2 0.2 0.018 15.2 0.0 3.0 3 0 0 3 3 2 2 AAA domain NACHT PF05729.12 AID32999.1 - 3.6e-05 23.7 1.4 0.12 12.3 0.1 3.1 3 1 0 3 3 2 2 NACHT domain AAA_15 PF13175.6 AID32999.1 - 5.6e-05 23.0 0.6 0.19 11.4 0.2 2.6 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 AID32999.1 - 0.00011 22.1 0.3 0.14 12.1 0.1 2.5 2 1 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 AID32999.1 - 0.00021 21.1 0.1 0.31 10.7 0.0 2.7 3 0 0 3 3 2 2 AAA domain Zeta_toxin PF06414.12 AID32999.1 - 0.00026 20.4 0.4 0.09 12.0 0.1 2.3 2 0 0 2 2 2 1 Zeta toxin TsaE PF02367.17 AID32999.1 - 0.00037 20.5 1.1 0.4 10.7 0.1 3.1 3 0 0 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 AID32999.1 - 0.0014 19.0 0.0 0.27 11.7 0.0 2.9 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 AID32999.1 - 0.0017 18.6 0.1 1.3 9.3 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_18 PF13238.6 AID32999.1 - 0.002 18.7 0.1 0.99 10.0 0.0 2.9 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 AID32999.1 - 0.0023 17.6 0.4 0.21 11.1 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Mg_chelatase PF01078.21 AID32999.1 - 0.0026 17.2 0.3 3.3 7.0 0.0 3.0 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI SRP54 PF00448.22 AID32999.1 - 0.0038 16.9 0.1 0.74 9.4 0.0 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_7 PF12775.7 AID32999.1 - 0.0042 16.6 0.1 0.48 9.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region NTPase_1 PF03266.15 AID32999.1 - 0.0043 17.0 0.2 3.6 7.5 0.1 2.8 2 0 0 2 2 2 1 NTPase RuvB_N PF05496.12 AID32999.1 - 0.0048 16.7 0.1 0.29 10.9 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_25 PF13481.6 AID32999.1 - 0.0059 16.2 2.0 2.4 7.7 0.1 3.0 2 1 0 2 2 2 1 AAA domain MobB PF03205.14 AID32999.1 - 0.0059 16.5 0.1 0.49 10.3 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.14 AID32999.1 - 0.0083 16.1 0.3 6.4 6.8 0.0 2.8 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) DLIC PF05783.11 AID32999.1 - 0.0096 14.8 0.4 0.32 9.8 0.1 2.3 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) RNA_helicase PF00910.22 AID32999.1 - 0.0098 16.3 0.0 3.1 8.2 0.0 2.4 2 0 0 2 2 2 1 RNA helicase MeaB PF03308.16 AID32999.1 - 0.02 13.9 1.9 0.36 9.8 0.1 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 AID32999.1 - 0.021 14.0 2.2 2.6 7.1 0.1 2.3 2 0 0 2 2 2 0 NB-ARC domain DUF3584 PF12128.8 AID32999.1 - 0.022 12.3 2.7 0.04 11.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) PduV-EutP PF10662.9 AID32999.1 - 0.024 14.4 1.2 1.8 8.3 0.1 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF4164 PF13747.6 AID32999.1 - 0.026 14.8 0.6 0.026 14.8 0.6 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF4164) AAA_28 PF13521.6 AID32999.1 - 0.032 14.5 3.1 1.5 9.1 0.1 3.2 3 0 0 3 3 2 0 AAA domain KAP_NTPase PF07693.14 AID32999.1 - 0.033 13.4 0.0 0.63 9.2 0.0 2.2 2 0 0 2 2 2 0 KAP family P-loop domain AAA_14 PF13173.6 AID32999.1 - 0.05 13.6 0.0 1.7 8.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 AID32999.1 - 0.059 12.0 0.2 12 4.4 0.0 2.8 3 0 0 3 3 3 0 AAA domain FeoB_N PF02421.18 AID32999.1 - 0.064 12.8 0.2 9 5.8 0.0 2.7 3 0 0 3 3 3 0 Ferrous iron transport protein B T2SSE PF00437.20 AID32999.1 - 0.067 12.2 0.2 9.3 5.2 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein G-alpha PF00503.20 AID32999.1 - 0.075 12.2 0.1 1.5 7.9 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit Dynamin_N PF00350.23 AID32999.1 - 0.077 13.1 0.6 15 5.6 0.0 2.7 3 0 0 3 3 2 0 Dynamin family Rad17 PF03215.15 AID32999.1 - 0.095 12.6 0.0 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 Rad17 P-loop domain MukB PF04310.12 AID32999.1 - 0.12 12.1 0.1 2.6 7.8 0.0 2.4 2 0 0 2 2 2 0 MukB N-terminal Arf PF00025.21 AID32999.1 - 0.19 11.1 0.7 1.8 8.0 0.1 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family ABC_tran_Xtn PF12848.7 AID32999.1 - 0.46 10.5 4.0 8.1 6.6 0.6 2.7 3 0 0 3 3 2 0 ABC transporter CcdA PF07362.12 AID33000.1 - 7.2e-23 80.8 0.3 8.1e-23 80.6 0.3 1.0 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA CcdB PF01845.17 AID33001.1 - 2.3e-30 104.8 0.0 2.5e-30 104.6 0.0 1.0 1 0 0 1 1 1 1 CcdB protein Adenylsucc_synt PF00709.21 AID33005.1 - 4.8e-173 575.9 0.1 5.5e-173 575.7 0.1 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase EamA PF00892.20 AID33006.1 - 2.4e-39 134.7 37.1 6.4e-25 87.9 15.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 AID33006.1 - 2.1e-06 27.3 12.9 0.0016 17.8 2.8 2.8 2 1 0 2 2 2 2 Triose-phosphate Transporter family SLC35F PF06027.12 AID33006.1 - 0.0006 19.4 10.6 0.0013 18.3 10.5 1.7 1 1 0 1 1 1 1 Solute carrier family 35 2-Hacid_dh_C PF02826.19 AID33007.1 - 1e-62 210.7 0.3 2.5e-62 209.4 0.1 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID33007.1 - 8.4e-34 116.1 0.4 8.4e-34 116.1 0.4 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IlvN PF07991.12 AID33007.1 - 0.00038 20.1 0.1 0.00074 19.1 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 AID33007.1 - 0.019 15.1 0.1 0.048 13.8 0.1 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ACT PF01842.25 AID33007.1 - 0.029 14.1 0.0 0.11 12.3 0.0 2.1 1 0 0 1 1 1 0 ACT domain Aminotran_5 PF00266.19 AID33008.1 - 1.4e-06 27.5 0.0 1.9e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V OMP_b-brl PF13505.6 AID33009.1 - 4.5e-16 59.5 8.2 5.6e-16 59.2 8.2 1.2 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Surface_Ag_2 PF01617.17 AID33009.1 - 2.6e-06 27.1 9.2 0.0013 18.2 0.2 2.9 2 1 0 2 2 2 2 Surface antigen OmpA_membrane PF01389.17 AID33009.1 - 0.0002 21.1 2.1 0.00043 20.1 2.1 1.6 1 1 0 1 1 1 1 OmpA-like transmembrane domain DUF2490 PF10677.9 AID33009.1 - 0.00023 21.2 0.0 0.046 13.7 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2490) Opacity PF02462.15 AID33009.1 - 0.0011 19.0 3.2 0.0034 17.5 3.2 1.9 1 1 0 1 1 1 1 Opacity family porin protein Toluene_X PF03349.16 AID33009.1 - 0.0029 16.2 0.5 0.18 10.3 0.1 2.2 2 0 0 2 2 2 2 Outer membrane protein transport protein (OMPP1/FadL/TodX) PagL PF09411.10 AID33009.1 - 0.0043 17.2 0.2 2.9 8.0 0.0 2.5 2 0 0 2 2 2 2 Lipid A 3-O-deacylase (PagL) OMP_b-brl PF13505.6 AID33010.1 - 9.8e-17 61.6 2.9 1.2e-16 61.3 2.9 1.2 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Opacity PF02462.15 AID33010.1 - 6.4e-09 36.0 0.5 2e-08 34.4 0.5 1.8 1 1 0 1 1 1 1 Opacity family porin protein Surface_Ag_2 PF01617.17 AID33010.1 - 1.5e-08 34.4 0.1 6.3e-07 29.1 0.0 2.1 1 1 1 2 2 2 1 Surface antigen PagL PF09411.10 AID33010.1 - 0.0014 18.8 0.2 0.0069 16.5 0.1 2.2 1 1 0 1 1 1 1 Lipid A 3-O-deacylase (PagL) DUF2490 PF10677.9 AID33010.1 - 0.041 13.8 0.1 9.6 6.1 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2490) PGM_PMM_I PF02878.16 AID33011.1 - 1.5e-43 147.8 0.0 4.5e-43 146.3 0.0 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 AID33011.1 - 2.3e-34 118.0 0.1 3.8e-34 117.3 0.1 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 AID33011.1 - 3e-20 72.8 0.0 1.2e-19 70.8 0.0 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 AID33011.1 - 4.6e-14 52.4 0.3 1.3e-13 50.9 0.3 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Peptidase_M41 PF01434.18 AID33015.1 - 1.5e-70 237.0 0.7 2.4e-70 236.3 0.7 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 AID33015.1 - 1.1e-46 158.6 0.0 3.3e-46 157.0 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) FtsH_ext PF06480.15 AID33015.1 - 3.9e-14 52.9 0.9 1.1e-13 51.5 0.1 2.0 2 0 0 2 2 2 1 FtsH Extracellular AAA_lid_3 PF17862.1 AID33015.1 - 1.1e-13 50.7 0.0 2.7e-13 49.5 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 AID33015.1 - 2.1e-07 31.1 0.1 1.5e-06 28.3 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 AID33015.1 - 1.4e-05 25.5 0.4 0.0012 19.3 0.1 2.7 2 1 1 3 3 2 1 AAA ATPase domain TIP49 PF06068.13 AID33015.1 - 7.5e-05 22.1 0.0 0.00018 20.9 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_22 PF13401.6 AID33015.1 - 0.00032 21.0 0.1 0.039 14.2 0.0 3.0 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.12 AID33015.1 - 0.00032 20.5 0.0 0.0019 18.0 0.0 2.3 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 AID33015.1 - 0.0024 18.0 0.0 0.0059 16.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 AID33015.1 - 0.011 15.8 0.0 0.032 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 AID33015.1 - 0.019 14.4 0.5 0.048 13.0 0.1 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 AID33015.1 - 0.029 14.1 0.0 0.066 12.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 AID33015.1 - 0.049 13.2 0.1 0.18 11.3 0.1 1.9 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 AID33015.1 - 0.069 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33015.1 - 0.084 12.4 0.0 0.29 10.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 AID33015.1 - 0.12 13.0 0.0 0.37 11.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 AID33015.1 - 0.12 12.6 0.1 0.57 10.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 AID33015.1 - 0.13 12.3 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID33015.1 - 0.18 11.7 0.0 0.52 10.2 0.0 1.8 1 0 0 1 1 1 0 NACHT domain ATP_bind_3 PF01171.20 AID33016.1 - 5.8e-53 179.3 0.0 7.5e-53 179.0 0.0 1.1 1 0 0 1 1 1 1 PP-loop family QueC PF06508.13 AID33016.1 - 0.0056 16.2 0.0 0.0086 15.6 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 AID33016.1 - 0.0058 16.3 0.4 0.016 14.9 0.4 1.6 1 1 0 1 1 1 1 Asparagine synthase TPR_6 PF13174.6 AID33017.1 - 2e-08 34.4 0.1 0.018 15.6 0.0 3.0 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID33017.1 - 5.4e-08 33.3 1.8 1.1e-05 25.9 0.1 2.8 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 AID33017.1 - 6.2e-06 25.9 0.2 0.0011 18.9 0.8 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID33017.1 - 3.4e-05 24.3 0.1 0.5 11.3 0.4 3.5 1 1 2 3 3 3 1 Tetratricopeptide repeat YfiO PF13525.6 AID33017.1 - 4.6e-05 23.2 0.1 8.1e-05 22.4 0.1 1.4 1 0 0 1 1 1 1 Outer membrane lipoprotein TolA_bind_tri PF16331.5 AID33017.1 - 0.00082 19.4 8.2 0.0015 18.5 8.2 1.4 1 0 0 1 1 1 1 TolA binding protein trimerisation GTP-bdg_M PF16360.5 AID33017.1 - 0.0041 17.7 0.2 0.0089 16.6 0.2 1.6 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region ANAPC3 PF12895.7 AID33017.1 - 0.025 14.8 0.2 0.11 12.7 0.1 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 AID33017.1 - 0.039 14.5 0.2 0.21 12.1 0.1 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF3215 PF11503.8 AID33017.1 - 0.12 12.3 0.1 0.54 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3215) TPR_1 PF00515.28 AID33017.1 - 0.14 12.0 0.5 0.45 10.4 0.2 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat SlyX PF04102.12 AID33017.1 - 0.32 11.6 2.5 0.68 10.6 2.5 1.5 1 0 0 1 1 1 0 SlyX DUF4407 PF14362.6 AID33017.1 - 0.95 8.8 4.2 1.2 8.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FctA PF12892.7 AID33017.1 - 4.6 8.1 5.8 10 6.9 5.4 1.9 1 1 0 1 1 1 0 Spy0128-like isopeptide containing domain OmpA PF00691.20 AID33018.1 - 1.1e-22 80.2 0.1 1.7e-22 79.6 0.1 1.3 1 0 0 1 1 1 1 OmpA family TolB_N PF04052.13 AID33019.1 - 2.9e-35 120.6 0.2 9.5e-35 119.0 0.1 1.9 2 0 0 2 2 2 1 TolB amino-terminal domain PD40 PF07676.12 AID33019.1 - 8.6e-35 118.0 19.1 1.8e-13 50.0 0.4 6.6 6 1 0 6 6 6 5 WD40-like Beta Propeller Repeat Pectate_lyase22 PF14583.6 AID33019.1 - 1.2e-06 27.5 0.0 0.57 8.8 0.0 3.7 3 1 1 4 4 4 3 Oligogalacturonate lyase DPPIV_N PF00930.21 AID33019.1 - 1.7e-06 27.1 0.0 0.023 13.5 0.0 3.7 1 1 2 3 3 3 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 AID33019.1 - 0.00054 19.3 0.0 0.051 12.8 0.0 2.9 1 1 2 3 3 3 1 Domain of unknown function (DUF5050) DUF4467 PF14729.6 AID33019.1 - 0.0015 18.8 0.0 0.0028 18.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function with cystatin-like fold (DUF4467) Gmad1 PF10647.9 AID33019.1 - 0.0062 16.3 0.0 0.053 13.3 0.0 2.3 2 1 1 3 3 3 2 Lipoprotein LpqB beta-propeller domain SGL PF08450.12 AID33019.1 - 0.018 14.6 0.0 0.52 9.8 0.0 2.5 2 1 0 2 2 2 0 SMP-30/Gluconolactonase/LRE-like region TonB_2 PF13103.6 AID33020.1 - 1.2e-07 31.8 0.0 1.2e-07 31.8 0.0 2.3 2 0 0 2 2 2 1 TonB C terminal TonB_C PF03544.14 AID33020.1 - 8.8e-06 26.1 0.0 2.4e-05 24.7 0.0 1.8 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal ExbD PF02472.16 AID33021.1 - 3.9e-32 111.1 0.3 4.4e-32 111.0 0.3 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR DUF2149 PF09919.9 AID33021.1 - 0.21 11.9 2.3 0.32 11.3 2.3 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) MotA_ExbB PF01618.16 AID33022.1 - 1.6e-37 128.1 2.9 2.4e-37 127.5 2.9 1.3 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF3723 PF12520.8 AID33022.1 - 0.13 10.9 0.1 0.2 10.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3723) Chloroa_b-bind PF00504.21 AID33022.1 - 1.2 9.7 4.0 0.19 12.2 0.2 1.7 2 0 0 2 2 2 0 Chlorophyll A-B binding protein Phage_holin_3_6 PF07332.11 AID33022.1 - 9.7 6.3 16.2 0.069 13.2 3.2 2.3 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III ParE_toxin PF05016.15 AID33023.1 - 1.4e-15 57.7 0.0 1.6e-15 57.5 0.0 1.0 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ParD_antitoxin PF03693.14 AID33024.1 - 2.7e-09 37.3 0.3 3.2e-09 37.1 0.3 1.3 1 1 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4HBT PF03061.22 AID33025.1 - 4.7e-18 65.3 0.1 7.2e-18 64.7 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 AID33025.1 - 7.5e-11 42.6 0.0 9.3e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 AID33025.1 - 0.00075 18.9 0.3 0.0021 17.4 0.1 1.6 1 1 1 2 2 2 1 Acyl-ACP thioesterase Cellulase PF00150.18 AID33026.1 - 4e-23 82.3 0.0 7.1e-23 81.4 0.0 1.3 1 1 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Radical_SAM PF04055.21 AID33026.1 - 0.043 14.2 0.0 0.84 10.0 0.0 2.3 2 1 0 2 2 2 0 Radical SAM superfamily Metallophos PF00149.28 AID33027.1 - 1.9e-08 35.1 0.0 3.9e-08 34.0 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 AID33027.1 - 5.5e-05 23.4 0.0 0.00019 21.7 0.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain RuvB_N PF05496.12 AID33028.1 - 3.2e-80 267.5 0.1 4.5e-80 267.0 0.1 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_4 PF17864.1 AID33028.1 - 2.3e-31 107.3 0.9 4.4e-31 106.4 0.9 1.5 1 0 0 1 1 1 1 RuvB AAA lid domain RuvB_C PF05491.13 AID33028.1 - 2.2e-29 101.1 0.0 3.7e-29 100.4 0.0 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain AAA PF00004.29 AID33028.1 - 1.1e-19 71.1 0.0 1.7e-19 70.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID33028.1 - 1.7e-11 44.2 0.4 6.8e-09 35.8 0.4 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 AID33028.1 - 4.1e-06 26.2 0.7 3.2e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain Mg_chelatase PF01078.21 AID33028.1 - 4.5e-06 26.2 0.7 0.0034 16.8 0.0 2.8 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 AID33028.1 - 5.5e-05 23.6 0.2 0.013 15.9 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 AID33028.1 - 9.1e-05 22.2 0.0 0.2 11.4 0.0 2.2 1 1 1 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.11 AID33028.1 - 0.0001 22.1 0.0 0.02 14.8 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID33028.1 - 0.00067 19.8 0.1 0.002 18.3 0.0 1.8 2 0 0 2 2 1 1 AAA domain Rad17 PF03215.15 AID33028.1 - 0.0007 19.6 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 AID33028.1 - 0.001 19.4 1.4 0.12 12.6 0.0 2.7 2 1 1 3 3 2 1 AAA domain AAA_14 PF13173.6 AID33028.1 - 0.0019 18.2 0.0 0.0034 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 AID33028.1 - 0.0022 18.2 0.1 0.043 13.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) TsaE PF02367.17 AID33028.1 - 0.0037 17.2 0.0 0.0066 16.4 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_17 PF13207.6 AID33028.1 - 0.0061 17.0 0.0 0.011 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID33028.1 - 0.0062 17.1 0.0 0.013 16.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 AID33028.1 - 0.012 15.6 0.4 0.36 10.7 0.0 2.5 2 1 1 3 3 3 0 NTPase RNA_helicase PF00910.22 AID33028.1 - 0.014 15.8 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.15 AID33028.1 - 0.015 15.3 0.0 4.5 7.3 0.0 2.3 1 1 0 2 2 2 0 Type III restriction enzyme, res subunit Sigma54_activ_2 PF14532.6 AID33028.1 - 0.015 15.4 0.0 0.029 14.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 AID33028.1 - 0.019 14.7 0.2 0.14 11.8 0.1 2.4 1 1 1 2 2 2 0 IstB-like ATP binding protein MCM PF00493.23 AID33028.1 - 0.032 13.3 0.0 1.1 8.3 0.0 2.2 1 1 0 1 1 1 0 MCM P-loop domain ABC_tran PF00005.27 AID33028.1 - 0.043 14.3 0.0 0.08 13.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_7 PF12775.7 AID33028.1 - 0.075 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Cytidylate_kin PF02224.18 AID33028.1 - 0.077 12.7 0.0 0.3 10.8 0.0 1.9 2 0 0 2 2 2 0 Cytidylate kinase NB-ARC PF00931.22 AID33028.1 - 0.083 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 AID33028.1 - 0.088 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 AID33028.1 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID33028.1 - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33028.1 - 0.12 12.0 0.2 0.66 9.5 0.1 2.1 1 1 1 2 2 2 0 AAA domain RuvA_N PF01330.21 AID33029.1 - 7.6e-18 64.4 0.0 2e-17 63.0 0.0 1.7 2 0 0 2 2 2 1 RuvA N terminal domain HHH_5 PF14520.6 AID33029.1 - 5.9e-15 55.6 0.1 2.2e-14 53.8 0.2 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain RuvA_C PF07499.13 AID33029.1 - 3.2e-10 40.3 1.5 3.2e-10 40.3 1.5 2.2 2 0 0 2 2 2 1 RuvA, C-terminal domain HHH PF00633.23 AID33029.1 - 2.4e-06 27.1 2.3 0.033 14.1 0.0 3.3 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_2 PF12826.7 AID33029.1 - 0.025 14.7 0.0 10 6.3 0.0 2.7 1 1 1 2 2 2 0 Helix-hairpin-helix motif Type_III_YscG PF09477.10 AID33029.1 - 0.058 13.5 0.1 0.37 10.9 0.0 2.1 2 1 0 2 2 2 0 Bacterial type II secretion system chaperone protein (type_III_yscG) HHH_3 PF12836.7 AID33029.1 - 0.12 12.6 0.1 7.2 7.0 0.0 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 AID33029.1 - 0.16 12.6 0.8 22 5.7 0.1 2.5 1 1 1 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HHH_8 PF14716.6 AID33029.1 - 0.18 12.2 3.7 6.2 7.3 0.0 3.9 4 1 1 5 5 5 0 Helix-hairpin-helix domain PIN PF01850.21 AID33030.1 - 2.1e-05 25.0 0.1 2.3e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 PIN domain MazE_antitoxin PF04014.18 AID33031.1 - 1.2e-09 37.8 0.0 1.6e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 AID33031.1 - 3.5e-06 27.4 0.0 4.1e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin RuvC PF02075.17 AID33032.1 - 3e-43 147.3 0.7 3.4e-43 147.1 0.7 1.0 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC DUF1465 PF07323.12 AID33033.1 - 1.2e-58 197.3 1.9 1.4e-58 197.1 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1465) NnrS PF05940.12 AID33034.1 - 0.0038 16.6 19.5 0.0052 16.2 19.5 1.1 1 0 0 1 1 1 1 NnrS protein COX1 PF00115.20 AID33034.1 - 0.0064 15.4 22.9 0.0095 14.8 22.9 1.3 1 1 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3285 PF11688.8 AID33034.1 - 0.19 11.7 2.5 0.6 10.1 2.5 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) Zn_peptidase_2 PF04298.12 AID33034.1 - 1.8 8.0 5.8 1.9 7.8 5.2 1.4 1 1 0 1 1 1 0 Putative neutral zinc metallopeptidase Cation_ATPase_C PF00689.21 AID33034.1 - 2.4 7.9 10.7 3 7.5 10.7 1.2 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF2269 PF10027.9 AID33035.1 - 5e-08 33.1 9.5 5e-08 33.1 9.5 1.8 1 1 1 2 2 2 1 Predicted integral membrane protein (DUF2269) UPF0093 PF03653.13 AID33035.1 - 0.00069 19.9 2.4 0.00069 19.9 2.4 1.7 2 1 0 2 2 2 1 Uncharacterised protein family (UPF0093) Urate_ox_N PF06181.11 AID33035.1 - 0.042 13.2 0.2 0.042 13.2 0.2 1.7 2 0 0 2 2 2 0 Urate oxidase N-terminal DUF202 PF02656.15 AID33035.1 - 4.5 7.8 12.2 1.2 9.6 2.0 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF202) TauE PF01925.19 AID33036.1 - 2.7e-30 105.7 28.4 3.3e-30 105.5 28.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2053 PF09767.9 AID33036.1 - 0.01 16.0 0.6 0.01 16.0 0.6 1.8 2 0 0 2 2 2 1 Predicted membrane protein (DUF2053) Methyltransf_11 PF08241.12 AID33037.1 - 4.6e-20 72.1 0.0 7e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID33037.1 - 1.1e-16 61.3 0.0 1.6e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID33037.1 - 5.2e-12 45.9 0.0 6.6e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID33037.1 - 7.8e-11 42.0 0.0 9.3e-11 41.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33037.1 - 6.1e-10 39.7 0.0 8.9e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID33037.1 - 0.00079 18.8 0.0 0.0011 18.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 AID33037.1 - 0.003 17.2 0.0 0.0042 16.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 AID33037.1 - 0.0049 15.8 0.0 0.0078 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 AID33037.1 - 0.0056 16.0 0.0 0.0086 15.4 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 AID33037.1 - 0.013 15.5 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 AID33037.1 - 0.015 14.9 0.0 0.029 13.9 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase small domain MetW PF07021.12 AID33037.1 - 0.1 12.2 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_4 PF02390.17 AID33037.1 - 0.14 11.6 0.0 0.66 9.4 0.0 1.9 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_2 PF00891.18 AID33037.1 - 0.18 11.1 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain HTH_24 PF13412.6 AID33038.1 - 2.2e-16 59.1 0.9 4.8e-16 58.1 0.9 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID33038.1 - 2.3e-15 56.1 3.6 4.9e-15 55.1 3.6 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 AID33038.1 - 3.7e-09 36.4 0.0 7.1e-09 35.5 0.0 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR_2 PF12802.7 AID33038.1 - 2.4e-06 27.3 0.5 5.6e-06 26.2 0.5 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 AID33038.1 - 3.8e-06 26.6 0.5 8.2e-06 25.5 0.5 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 AID33038.1 - 4.4e-06 26.7 0.5 1.1e-05 25.4 0.5 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID33038.1 - 7.5e-06 25.8 0.1 1.9e-05 24.5 0.0 1.6 2 0 0 2 2 1 1 MarR family HTH_5 PF01022.20 AID33038.1 - 8.8e-06 25.5 0.1 0.00016 21.4 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 AID33038.1 - 9.9e-05 22.2 0.1 0.00017 21.5 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 AID33038.1 - 0.00019 21.2 0.1 0.00036 20.2 0.1 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_10 PF04967.12 AID33038.1 - 0.00026 20.7 0.1 0.00048 19.9 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain TrmB PF01978.19 AID33038.1 - 0.0007 19.4 0.1 0.001 18.9 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 AID33038.1 - 0.0029 18.0 0.1 0.0056 17.1 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_1 PF00126.27 AID33038.1 - 0.0041 17.0 0.6 0.014 15.3 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID33038.1 - 0.0042 17.2 0.5 0.01 15.9 0.0 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain GntR PF00392.21 AID33038.1 - 0.011 15.4 0.5 0.011 15.4 0.5 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 AID33038.1 - 0.011 15.9 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HxlR PF01638.17 AID33038.1 - 0.015 15.1 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Mga PF05043.13 AID33038.1 - 0.03 14.9 0.0 0.053 14.1 0.0 1.3 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_11 PF08279.12 AID33038.1 - 0.041 13.8 0.3 0.09 12.7 0.1 1.8 2 0 0 2 2 1 0 HTH domain DprA_WH PF17782.1 AID33038.1 - 0.045 13.9 0.8 0.11 12.7 0.8 1.7 1 0 0 1 1 1 0 DprA winged helix domain HTH_30 PF13556.6 AID33038.1 - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_Mga PF08280.11 AID33038.1 - 0.14 12.2 0.1 0.29 11.2 0.0 1.5 2 0 0 2 2 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_50 PF18024.1 AID33038.1 - 0.15 11.7 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID33038.1 - 0.16 12.3 0.1 0.36 11.2 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator DDRGK PF09756.9 AID33038.1 - 0.19 11.3 0.0 0.35 10.5 0.0 1.4 1 0 0 1 1 1 0 DDRGK domain EamA PF00892.20 AID33039.1 - 1.6e-30 106.1 37.2 3.2e-19 69.5 13.3 2.1 2 0 0 2 2 2 2 EamA-like transporter family Adeno_E3 PF06040.11 AID33039.1 - 0.098 12.8 0.1 0.3 11.3 0.1 1.8 1 0 0 1 1 1 0 Adenovirus E3 protein MFS_1 PF07690.16 AID33039.1 - 0.17 10.8 36.9 0.0064 15.5 12.1 2.4 1 1 1 2 2 2 0 Major Facilitator Superfamily TMP-TENI PF02581.17 AID33040.1 - 2.2e-35 121.6 0.1 2.6e-35 121.4 0.1 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase Sel1 PF08238.12 AID33041.1 - 4.5e-28 97.1 27.0 1.4e-06 28.7 1.4 6.5 6 0 0 6 6 6 6 Sel1 repeat Elong-fact-P_C PF09285.11 AID33042.1 - 2.6e-22 78.3 0.3 1.4e-21 76.0 0.4 2.1 2 0 0 2 2 2 1 Elongation factor P, C-terminal EFP_N PF08207.12 AID33042.1 - 4.3e-20 71.5 0.1 7.4e-20 70.7 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 AID33042.1 - 4.6e-20 71.4 1.6 4.6e-20 71.4 1.6 1.9 3 0 0 3 3 3 1 Elongation factor P (EF-P) OB domain Inositol_P PF00459.25 AID33043.1 - 1.2e-61 208.6 0.0 1.5e-61 208.3 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family HlyIII PF03006.20 AID33044.1 - 2.7e-25 89.4 15.6 3.3e-25 89.1 15.6 1.1 1 0 0 1 1 1 1 Haemolysin-III related MotA_ExbB PF01618.16 AID33045.1 - 4e-06 26.6 0.5 4e-06 26.6 0.5 3.0 3 0 0 3 3 3 1 MotA/TolQ/ExbB proton channel family DUF3243 PF11588.8 AID33045.1 - 0.011 16.1 0.5 0.02 15.2 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3243) DUF1373 PF07117.11 AID33045.1 - 0.06 13.3 0.0 4.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1373) DUF2530 PF10745.9 AID33045.1 - 0.084 13.1 2.0 0.25 11.6 2.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) DASH_Dam1 PF08653.10 AID33045.1 - 0.12 12.2 0.1 11 5.9 0.0 3.1 3 0 0 3 3 3 0 DASH complex subunit Dam1 OmpA PF00691.20 AID33046.1 - 4.2e-18 65.5 0.1 1.6e-17 63.6 0.0 2.0 2 0 0 2 2 2 1 OmpA family DUF745 PF05335.13 AID33046.1 - 0.00017 21.4 13.2 0.00026 20.8 13.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF745) DUF4407 PF14362.6 AID33046.1 - 0.00036 20.0 6.5 0.00061 19.2 6.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) ABC_tran_CTD PF16326.5 AID33046.1 - 0.00078 19.6 14.3 0.05 13.8 0.3 3.6 2 1 2 4 4 4 3 ABC transporter C-terminal domain AAA_13 PF13166.6 AID33046.1 - 0.055 12.1 6.2 0.62 8.6 6.5 1.9 1 1 0 1 1 1 0 AAA domain DUF1664 PF07889.12 AID33046.1 - 0.075 13.1 1.4 0.17 11.9 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HIP1_clath_bdg PF16515.5 AID33046.1 - 0.13 12.9 12.3 1.5 9.5 1.5 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4201 PF13870.6 AID33046.1 - 0.19 11.4 4.6 0.32 10.7 2.9 2.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) CENP-F_leu_zip PF10473.9 AID33046.1 - 0.23 11.5 10.4 0.2 11.7 1.3 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FUSC PF04632.12 AID33046.1 - 0.24 9.9 11.0 0.3 9.6 11.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Malate_DH PF12434.8 AID33046.1 - 0.25 11.4 0.2 0.25 11.4 0.2 2.4 3 0 0 3 3 3 0 Malate dehydrogenase enzyme DUF4200 PF13863.6 AID33046.1 - 0.31 11.4 11.0 1.5 9.2 0.4 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 AID33046.1 - 0.5 10.5 6.9 0.79 9.8 6.5 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TolA_bind_tri PF16331.5 AID33046.1 - 0.54 10.4 17.4 0.047 13.8 7.6 3.1 2 2 1 3 3 3 0 TolA binding protein trimerisation HemX PF04375.14 AID33046.1 - 0.7 9.1 17.1 1.6 8.0 8.3 2.1 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Spc7 PF08317.11 AID33046.1 - 1.4 7.7 11.8 0.45 9.4 7.4 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein APG6_N PF17675.1 AID33046.1 - 1.6 9.2 13.3 0.98 10.0 8.2 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region Dynactin_p22 PF07426.11 AID33046.1 - 2.1 8.2 7.7 6.7 6.5 7.5 2.0 1 1 0 1 1 1 0 Dynactin subunit p22 Syntaxin-6_N PF09177.11 AID33046.1 - 5 7.7 6.9 18 5.9 2.4 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF948 PF06103.11 AID33046.1 - 6.4 7.1 6.8 4.7 7.5 2.4 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4140 PF13600.6 AID33046.1 - 6.5 7.3 12.6 2.6 8.5 2.3 3.1 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) DUF2680 PF10925.8 AID33046.1 - 9.2 6.4 10.6 7.5 6.6 1.7 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) DUF1304 PF06993.12 AID33048.1 - 4.5e-44 148.9 7.1 5.1e-44 148.8 7.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1304) Peptidase_M32 PF02074.15 AID33049.1 - 4.3e-161 537.0 0.0 4.8e-161 536.8 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase ABC_membrane PF00664.23 AID33050.1 - 1.9e-49 168.8 10.9 2.4e-49 168.4 10.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 AID33050.1 - 2.2e-34 118.9 0.0 3.5e-34 118.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID33050.1 - 2.5e-09 36.9 0.0 8.2e-07 28.7 0.0 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID33050.1 - 0.0016 18.8 2.6 0.0017 18.8 0.4 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 AID33050.1 - 0.0033 17.3 0.1 0.31 10.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID33050.1 - 0.0054 16.5 0.0 0.013 15.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID33050.1 - 0.0062 16.8 0.0 0.054 13.8 0.0 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID33050.1 - 0.031 14.2 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Zeta_toxin PF06414.12 AID33050.1 - 0.034 13.4 0.1 0.19 11.0 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin MMR_HSR1 PF01926.23 AID33050.1 - 0.12 12.5 0.0 0.29 11.2 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase Lactamase_B_5 PF14597.6 AID33050.1 - 0.14 11.6 0.1 0.24 10.8 0.1 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily AAA_23 PF13476.6 AID33050.1 - 0.21 12.0 0.0 0.37 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID33050.1 - 1.3 9.3 6.9 12 6.3 1.1 3.9 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit Ribosomal_L31 PF01197.18 AID33051.1 - 4.7e-25 87.6 0.0 5.2e-25 87.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L31 TetR_C_22 PF17928.1 AID33052.1 - 5.8e-32 110.4 1.0 1.1e-31 109.5 1.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID33052.1 - 1.8e-12 46.9 0.0 3.5e-12 45.9 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 AID33052.1 - 6.8e-10 39.7 3.7 6.8e-10 39.7 3.7 2.1 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain DUF4192 PF13830.6 AID33052.1 - 0.016 15.3 10.6 0.021 14.9 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4192) NAD_binding_10 PF13460.6 AID33053.1 - 1.3e-14 54.5 0.1 2.3e-11 43.9 0.1 3.2 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AID33053.1 - 1.3e-07 31.4 0.0 0.0018 17.9 0.0 2.3 2 0 0 2 2 2 2 NmrA-like family DUF746 PF05344.11 AID33053.1 - 0.0049 16.7 0.0 0.029 14.2 0.0 2.2 2 0 0 2 2 2 1 Domain of Unknown Function (DUF746) Epimerase PF01370.21 AID33053.1 - 0.006 16.1 0.1 0.31 10.5 0.1 2.5 2 1 1 3 3 3 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 AID33053.1 - 0.0064 15.6 0.0 2.9 6.9 0.0 2.2 2 0 0 2 2 2 2 RmlD substrate binding domain KR PF08659.10 AID33053.1 - 0.0088 16.0 2.0 1.7 8.5 0.1 2.3 1 1 1 2 2 2 2 KR domain Glyco_trans_4_4 PF13579.6 AID33053.1 - 0.019 15.4 4.3 0.72 10.3 1.4 2.2 1 1 1 2 2 2 0 Glycosyl transferase 4-like domain F420_oxidored PF03807.17 AID33053.1 - 0.041 14.5 0.1 0.38 11.4 0.0 2.3 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent CbiJ PF02571.14 AID33053.1 - 0.18 11.2 0.0 0.5 9.8 0.0 1.7 2 0 0 2 2 2 0 Precorrin-6x reductase CbiJ/CobK DUF1772 PF08592.11 AID33054.1 - 4.9e-19 69.0 14.5 6.7e-19 68.6 14.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1772) PRMT5_TIM PF17285.2 AID33054.1 - 0.014 14.6 0.0 0.019 14.2 0.0 1.1 1 0 0 1 1 1 0 PRMT5 TIM barrel domain Rdx PF10262.9 AID33055.1 - 3.5e-32 110.4 0.0 4.1e-32 110.2 0.0 1.1 1 0 0 1 1 1 1 Rdx family Transcrip_reg PF01709.20 AID33056.1 - 4.3e-94 314.4 0.2 4.9e-94 314.3 0.2 1.0 1 0 0 1 1 1 1 Transcriptional regulator AHSA1 PF08327.11 AID33057.1 - 2.1e-12 47.3 0.0 2.7e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein HTH_20 PF12840.7 AID33058.1 - 3.4e-14 52.6 0.3 5.4e-14 52.0 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID33058.1 - 8.2e-05 22.4 0.0 0.00017 21.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PAS_9 PF13426.7 AID33058.1 - 0.045 14.0 0.0 0.047 13.9 0.0 1.2 1 0 0 1 1 1 0 PAS domain 3-dmu-9_3-mt PF06983.13 AID33059.1 - 1.6e-30 106.1 0.0 1.8e-30 105.9 0.0 1.0 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Glyoxalase PF00903.25 AID33059.1 - 0.036 14.3 0.0 0.041 14.1 0.0 1.4 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WVELL PF14043.6 AID33060.1 - 0.022 14.6 0.5 0.042 13.7 0.5 1.5 1 0 0 1 1 1 0 WVELL protein AHSA1 PF08327.11 AID33061.1 - 1.3e-13 51.2 1.6 1.5e-13 51.1 1.6 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Lyase_N PF09092.11 AID33061.1 - 0.068 13.0 0.1 0.084 12.7 0.1 1.1 1 0 0 1 1 1 0 Lyase, N terminal TerC PF03741.16 AID33062.1 - 5e-50 169.7 17.9 6.3e-50 169.4 17.9 1.1 1 0 0 1 1 1 1 Integral membrane protein TerC family YmdB PF13277.6 AID33063.1 - 4.7e-95 317.7 0.0 5.3e-95 317.6 0.0 1.0 1 0 0 1 1 1 1 YmdB-like protein 5-FTHF_cyc-lig PF01812.20 AID33064.1 - 1.1e-30 106.8 0.0 1.3e-30 106.6 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family AAA PF00004.29 AID33065.1 - 4.8e-13 49.7 0.0 8.3e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID33065.1 - 3.2e-12 46.6 0.0 5.4e-12 45.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AID33065.1 - 7.1e-07 29.1 0.0 0.039 13.6 0.0 2.1 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 AID33065.1 - 6.7e-06 26.4 0.1 3e-05 24.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID33065.1 - 8.5e-06 26.3 1.6 0.00041 20.8 0.9 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 AID33065.1 - 2.2e-05 24.7 0.0 3.3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 AID33065.1 - 0.0011 19.3 0.7 0.017 15.5 0.8 2.4 2 1 0 2 2 2 1 AAA domain TsaE PF02367.17 AID33065.1 - 0.0013 18.7 0.0 0.0022 18.0 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 AID33065.1 - 0.0015 18.5 0.0 0.0041 17.1 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 AID33065.1 - 0.0022 17.8 0.0 0.0044 16.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AID33065.1 - 0.0031 17.5 0.1 0.035 14.0 0.0 2.2 2 0 0 2 2 2 1 NACHT domain AAA_3 PF07726.11 AID33065.1 - 0.0053 16.6 0.0 0.3 11.0 0.0 2.7 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 AID33065.1 - 0.01 16.4 0.0 0.022 15.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID33065.1 - 0.015 15.5 0.0 0.023 14.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID33065.1 - 0.025 13.9 0.1 0.058 12.8 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 AID33065.1 - 0.028 14.2 0.2 0.08 12.7 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 AID33065.1 - 0.034 13.6 0.0 0.2 11.2 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF2075 PF09848.9 AID33065.1 - 0.041 13.1 0.0 0.053 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 AID33065.1 - 0.056 13.8 0.0 0.16 12.3 0.0 2.0 1 1 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 AID33065.1 - 0.057 12.6 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain DNA_pol3_delta2 PF13177.6 AID33065.1 - 0.062 13.1 0.0 0.18 11.6 0.0 1.7 1 1 0 1 1 1 0 DNA polymerase III, delta subunit TIP49 PF06068.13 AID33065.1 - 0.095 11.9 1.4 0.26 10.4 0.0 2.1 2 1 0 2 2 2 0 TIP49 P-loop domain Rad17 PF03215.15 AID33065.1 - 0.12 12.3 0.0 0.27 11.1 0.0 1.6 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_6 PF12774.7 AID33065.1 - 0.18 10.7 0.0 0.38 9.7 0.0 1.5 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Acetyltransf_1 PF00583.25 AID33067.1 - 2.2e-14 53.7 0.1 2.9e-14 53.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID33067.1 - 2.7e-08 33.8 0.0 3.5e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID33067.1 - 2.6e-07 31.0 0.1 3.9e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33067.1 - 0.00015 21.7 0.0 0.00023 21.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID33067.1 - 0.00026 21.0 0.1 0.001 19.2 0.0 1.9 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 AID33067.1 - 0.0023 18.6 0.1 0.003 18.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID33067.1 - 0.0034 17.5 0.0 0.0043 17.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID33067.1 - 0.15 11.8 0.0 0.45 10.2 0.0 1.6 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain, PanZ VWA_CoxE PF05762.14 AID33068.1 - 1.6e-09 37.5 0.0 3.7e-08 33.0 0.0 2.2 2 0 0 2 2 2 2 VWA domain containing CoxE-like protein Lactamase_B PF00753.27 AID33069.1 - 0.00017 21.7 0.0 0.00028 21.0 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SelR PF01641.18 AID33070.1 - 5.1e-50 168.6 0.0 5.8e-50 168.4 0.0 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 AID33070.1 - 0.013 15.7 0.2 0.041 14.1 0.2 1.7 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly HECT_2 PF09814.9 AID33070.1 - 0.13 11.1 0.1 7.1 5.4 0.0 2.0 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding Phageshock_PspG PF09583.10 AID33071.1 - 4.7 7.6 12.4 0.11 12.8 5.3 1.8 2 0 0 2 2 2 0 Phage shock protein G (Phageshock_PspG) DUF4268 PF14088.6 AID33072.1 - 0.00045 20.1 0.0 0.0011 18.8 0.0 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4268) DUF2312 PF10073.9 AID33073.1 - 1.1e-35 121.1 5.1 1.3e-35 120.8 5.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2312) MerR-DNA-bind PF09278.11 AID33073.1 - 0.0022 18.5 3.9 0.092 13.3 0.1 2.2 2 0 0 2 2 2 2 MerR, DNA binding vATP-synt_AC39 PF01992.16 AID33073.1 - 0.0084 15.6 0.3 0.0084 15.6 0.3 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit Qua1 PF16274.5 AID33073.1 - 0.01 15.6 1.0 2.5 8.0 0.2 2.1 2 0 0 2 2 2 0 Qua1 domain Prefoldin_3 PF13758.6 AID33073.1 - 0.015 15.3 0.7 0.018 15.1 0.7 1.1 1 0 0 1 1 1 0 Prefoldin subunit DUF2951 PF11166.8 AID33073.1 - 0.075 13.3 1.2 0.12 12.6 1.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) ZapB PF06005.12 AID33073.1 - 0.62 10.5 5.2 5.9 7.4 5.2 2.0 1 1 0 1 1 1 0 Cell division protein ZapB PYC_OADA PF02436.18 AID33074.1 - 6.1e-73 244.8 0.0 1.2e-72 243.9 0.0 1.5 1 0 0 1 1 1 1 Conserved carboxylase domain CPSase_L_D2 PF02786.17 AID33074.1 - 1e-71 240.8 0.1 1.7e-71 240.1 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 AID33074.1 - 1.3e-38 131.9 0.1 1.2e-37 128.9 0.0 2.6 3 0 0 3 3 3 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 AID33074.1 - 1.3e-33 115.3 0.0 7.8e-33 112.8 0.0 2.2 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain HMGL-like PF00682.19 AID33074.1 - 1e-26 94.1 0.0 3.2e-26 92.5 0.0 1.9 2 1 0 2 2 2 1 HMGL-like Biotin_lipoyl PF00364.22 AID33074.1 - 1.2e-16 60.3 0.4 2.7e-16 59.2 0.4 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme ATP-grasp PF02222.22 AID33074.1 - 2e-10 40.5 0.0 4.1e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 AID33074.1 - 4.5e-10 39.2 0.5 2e-06 27.5 0.0 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like Dala_Dala_lig_C PF07478.13 AID33074.1 - 1.8e-07 30.9 0.0 4.1e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus HlyD_D23 PF16576.5 AID33074.1 - 0.0001 21.6 0.1 0.0038 16.5 0.0 2.4 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID33074.1 - 0.00016 22.3 0.1 0.072 13.8 0.0 2.7 2 0 0 2 2 2 1 HlyD family secretion protein ATP-grasp_3 PF02655.14 AID33074.1 - 0.0015 18.6 0.0 0.0031 17.6 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 AID33074.1 - 0.0059 16.4 0.1 0.019 14.7 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Peripla_BP_6 PF13458.6 AID33075.1 - 2.3e-60 205.1 13.5 2.6e-60 204.9 13.5 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID33075.1 - 1e-19 70.9 0.0 1.3e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 AID33075.1 - 1.3e-18 67.1 0.1 1.9e-18 66.6 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain KdgT PF03812.13 AID33076.1 - 0.077 12.3 1.2 0.08 12.2 1.2 1.1 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease ABC_tran PF00005.27 AID33077.1 - 4.3e-32 111.5 0.0 5.9e-32 111.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33077.1 - 4.8e-11 43.0 1.4 7.4e-05 22.7 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID33077.1 - 0.00016 21.4 0.0 0.00039 20.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 AID33077.1 - 0.00047 20.2 0.1 0.00065 19.8 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID33077.1 - 0.0014 18.6 0.1 0.0037 17.2 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID33077.1 - 0.0017 18.8 0.0 0.0031 17.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain BCA_ABC_TP_C PF12399.8 AID33077.1 - 0.0024 17.8 0.0 0.0039 17.1 0.0 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.19 AID33077.1 - 0.0024 17.4 0.2 0.033 13.6 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID33077.1 - 0.0039 17.7 0.1 0.006 17.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain Septin PF00735.18 AID33077.1 - 0.012 14.9 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Septin AAA_15 PF13175.6 AID33077.1 - 0.013 15.3 0.0 0.03 14.0 0.0 1.5 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 AID33077.1 - 0.015 15.6 0.2 0.07 13.4 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33077.1 - 0.02 14.5 0.3 0.19 11.3 0.2 2.2 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 AID33077.1 - 0.072 12.9 0.3 0.14 11.9 0.3 1.4 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 AID33077.1 - 0.1 12.3 0.8 0.18 11.5 0.8 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 AID33077.1 - 0.14 12.1 0.2 0.37 10.7 0.1 1.7 2 0 0 2 2 2 0 NACHT domain NB-ARC PF00931.22 AID33077.1 - 0.14 11.3 0.2 0.33 10.1 0.2 1.6 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 AID33077.1 - 0.17 11.9 0.0 0.72 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID33078.1 - 2.3e-28 99.4 0.0 8.1e-28 97.6 0.0 1.9 2 0 0 2 2 2 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID33078.1 - 2.1e-08 33.9 0.0 2.1e-08 33.9 0.0 2.2 3 0 0 3 3 3 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 AID33078.1 - 8.8e-08 32.3 0.0 0.00031 20.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID33078.1 - 5.4e-05 23.8 0.8 9.5e-05 23.0 0.8 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID33078.1 - 0.0013 18.4 0.1 0.0046 16.7 0.1 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID33078.1 - 0.0041 16.6 0.0 0.024 14.1 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID33078.1 - 0.0049 17.1 0.1 0.11 12.7 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID33078.1 - 0.0079 15.9 0.0 0.027 14.2 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_27 PF13514.6 AID33078.1 - 0.027 14.1 0.0 0.11 12.1 0.0 2.0 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 AID33078.1 - 0.05 14.0 0.0 0.11 12.9 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 AID33078.1 - 0.056 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase BPD_transp_2 PF02653.16 AID33079.1 - 3.6e-49 167.3 33.9 3.6e-49 167.3 33.9 2.3 2 1 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3382 PF11862.8 AID33079.1 - 4.1e-15 55.8 7.7 4.1e-15 55.8 7.7 3.8 5 0 0 5 5 5 1 Domain of unknown function (DUF3382) BPD_transp_2 PF02653.16 AID33080.1 - 4.7e-52 176.8 38.4 5.4e-52 176.6 38.4 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF3488 PF11992.8 AID33080.1 - 0.0076 15.2 5.6 0.0076 15.2 5.6 2.3 2 1 1 3 3 3 1 Domain of unknown function (DUF3488) Vpu PF00558.19 AID33080.1 - 0.29 10.9 2.5 7.5 6.4 0.3 2.8 2 0 0 2 2 2 0 Vpu protein DUF3810 PF12725.7 AID33080.1 - 9.7 5.4 14.0 3.9 6.7 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3810) Pro_racemase PF05544.11 AID33081.1 - 1.5e-138 461.3 0.0 1.7e-138 461.2 0.0 1.0 1 0 0 1 1 1 1 Proline racemase PhzC-PhzF PF02567.16 AID33081.1 - 0.0031 17.0 0.0 0.0058 16.1 0.0 1.4 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein DAO PF01266.24 AID33082.1 - 5.1e-51 174.3 1.9 6.1e-51 174.1 1.9 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID33082.1 - 5.8e-08 32.3 0.1 9.1e-05 21.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID33082.1 - 6e-06 26.4 1.7 1.4e-05 25.2 0.1 2.5 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID33082.1 - 9.9e-05 22.8 0.7 0.0002 21.9 0.7 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID33082.1 - 0.0011 18.3 0.5 0.0031 16.8 0.2 1.8 2 0 0 2 2 2 1 FAD binding domain Trp_halogenase PF04820.14 AID33082.1 - 0.0033 16.3 0.3 1.2 7.9 0.4 2.1 2 0 0 2 2 2 2 Tryptophan halogenase ApbA PF02558.16 AID33082.1 - 0.0034 17.0 0.6 0.0057 16.3 0.6 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 AID33082.1 - 0.0046 17.0 1.0 2.7 7.9 0.1 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding HI0933_like PF03486.14 AID33082.1 - 0.0095 14.7 1.3 0.21 10.3 1.0 2.1 2 0 0 2 2 2 1 HI0933-like protein 3HCDH_N PF02737.18 AID33082.1 - 0.016 15.1 0.2 0.028 14.3 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 AID33082.1 - 0.027 13.7 0.3 1 8.6 0.3 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 AID33082.1 - 0.036 13.4 0.0 0.063 12.6 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID33082.1 - 0.039 13.0 1.5 0.52 9.3 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_oxidored PF12831.7 AID33082.1 - 0.043 13.2 1.6 0.064 12.6 1.6 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 AID33082.1 - 0.05 14.1 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 AID33082.1 - 0.15 11.1 3.4 0.17 11.0 1.2 1.9 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 AID33082.1 - 0.2 10.7 0.9 0.65 9.0 1.0 1.7 2 0 0 2 2 2 0 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID33082.1 - 0.25 10.6 4.1 0.058 12.7 0.6 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 AID33082.1 - 2.4 7.7 6.1 6.6 6.3 2.2 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DHDPS PF00701.22 AID33083.1 - 1.3e-48 165.2 0.0 1.5e-48 165.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ETF PF01012.21 AID33083.1 - 0.011 15.6 1.6 0.02 14.8 1.6 1.3 1 0 0 1 1 1 0 Electron transfer flavoprotein domain FCD PF07729.12 AID33084.1 - 1.6e-14 54.4 14.1 2.8e-14 53.6 14.1 1.4 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID33084.1 - 8.1e-14 51.0 0.2 1.7e-13 50.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 AID33084.1 - 0.039 14.1 0.0 0.071 13.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PaaX PF07848.12 AID33084.1 - 0.1 12.8 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein DUF2997 PF11211.8 AID33085.1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) HxlR PF01638.17 AID33087.1 - 1.8e-31 107.9 0.0 2e-31 107.6 0.0 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 AID33087.1 - 0.046 13.6 0.0 0.093 12.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.14 AID33087.1 - 0.1 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family SnoaL_2 PF12680.7 AID33088.1 - 6e-11 42.9 0.4 6.7e-11 42.7 0.4 1.0 1 0 0 1 1 1 1 SnoaL-like domain Myco_19_kDa PF05481.12 AID33088.1 - 0.0011 19.2 0.0 0.0014 18.9 0.0 1.1 1 0 0 1 1 1 1 Mycobacterium 19 kDa lipoprotein antigen SnoaL_3 PF13474.6 AID33088.1 - 0.073 13.3 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain adh_short_C2 PF13561.6 AID33089.1 - 1.1e-44 152.8 1.3 3.2e-44 151.2 1.3 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33089.1 - 1.3e-39 135.7 0.4 1.7e-39 135.3 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF1776 PF08643.10 AID33089.1 - 9e-06 25.3 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) KR PF08659.10 AID33089.1 - 0.0077 16.2 1.2 0.15 11.9 1.2 2.2 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID33089.1 - 0.012 15.1 0.1 0.027 13.9 0.1 1.6 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family SWIRM-assoc_3 PF16498.5 AID33089.1 - 0.5 10.7 2.3 0.53 10.6 0.8 1.8 2 0 0 2 2 2 0 SWIRM-associated domain at the C-terminal Aldedh PF00171.22 AID33090.1 - 5.1e-143 476.9 0.0 6.1e-143 476.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 AID33090.1 - 2e-06 27.1 0.0 2.9e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) LysR_substrate PF03466.20 AID33091.1 - 6.5e-30 104.1 2.3 6.5e-30 104.1 2.3 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID33091.1 - 8e-17 60.9 1.0 1.7e-16 59.9 1.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF1778 PF08681.11 AID33091.1 - 0.12 12.3 2.0 8 6.5 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1778) Phospholip_A2_1 PF00068.19 AID33092.1 - 1.3e-05 25.6 3.5 2.5e-05 24.7 3.5 1.4 1 1 0 1 1 1 1 Phospholipase A2 Parvo_coat_N PF08398.10 AID33092.1 - 0.078 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Parvovirus coat protein VP1 Phospholip_A2_2 PF05826.12 AID33092.1 - 0.082 13.1 3.6 0.19 12.0 0.5 2.1 1 1 1 2 2 2 0 Phospholipase A2 PsbP PF01789.16 AID33093.1 - 0.26 11.4 0.3 1.1 9.3 0.0 2.1 3 0 0 3 3 3 0 PsbP PLDc_2 PF13091.6 AID33094.1 - 1.3e-18 67.2 0.1 4.7e-15 55.6 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 AID33094.1 - 2.6e-05 24.2 0.4 8.3e-05 22.6 0.1 2.1 2 0 0 2 2 2 1 Phospholipase D Active site motif DAO PF01266.24 AID33095.1 - 3.7e-69 234.0 0.2 4.2e-69 233.8 0.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33095.1 - 1.3e-06 28.5 0.1 3.8e-06 27.0 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID33095.1 - 3.1e-06 27.6 0.1 2.4e-05 24.8 0.1 2.4 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID33095.1 - 3.3e-05 23.3 0.4 5.7e-05 22.5 0.2 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID33095.1 - 5.4e-05 22.1 0.1 0.071 11.8 0.2 2.8 3 0 0 3 3 3 2 HI0933-like protein ApbA PF02558.16 AID33095.1 - 0.00011 21.9 0.2 0.00019 21.1 0.2 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 AID33095.1 - 0.00035 20.2 0.3 0.00063 19.4 0.3 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 AID33095.1 - 0.00074 19.4 0.2 0.0015 18.5 0.2 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_oxidored PF12831.7 AID33095.1 - 0.005 16.2 0.2 1.4 8.2 0.2 2.2 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID33095.1 - 0.0076 15.5 0.1 0.47 9.7 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID33095.1 - 0.015 14.5 0.2 0.023 13.9 0.2 1.2 1 0 0 1 1 1 0 FAD binding domain AlaDh_PNT_C PF01262.21 AID33095.1 - 0.031 13.6 0.2 0.049 12.9 0.2 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 AID33095.1 - 0.059 13.8 0.0 0.1 13.0 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Glyco_transf_4 PF13439.6 AID33095.1 - 0.068 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Thi4 PF01946.17 AID33095.1 - 0.085 12.1 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 Thi4 family FAD_binding_2 PF00890.24 AID33095.1 - 0.089 11.9 0.1 0.14 11.2 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 AID33095.1 - 0.12 12.4 0.1 0.27 11.2 0.1 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.24 AID33095.1 - 0.13 11.5 0.0 2.2 7.5 0.0 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase GIDA PF01134.22 AID33095.1 - 0.13 11.3 0.1 0.31 10.1 0.1 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A TrkA_N PF02254.18 AID33095.1 - 0.18 12.1 0.0 0.37 11.1 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 AID33095.1 - 0.19 12.0 0.1 1 9.6 0.1 2.1 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_2 PF03446.15 AID33095.1 - 0.19 11.9 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Trp_halogenase PF04820.14 AID33095.1 - 0.42 9.4 2.8 0.4 9.5 0.1 2.1 3 0 0 3 3 3 0 Tryptophan halogenase GreA_GreB PF01272.19 AID33096.1 - 0.0021 17.9 0.0 0.0032 17.3 0.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term GreA_GreB PF01272.19 AID33097.1 - 2.4e-19 69.0 0.0 4.1e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Rnk_N PF14760.6 AID33097.1 - 1.9e-09 37.8 2.1 3.2e-09 37.1 2.1 1.4 1 0 0 1 1 1 1 Rnk N-terminus Ala_racemase_N PF01168.20 AID33098.1 - 2.3e-57 194.2 0.0 3e-57 193.8 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 AID33098.1 - 2.3e-31 108.2 0.0 3.7e-31 107.5 0.0 1.3 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain NUDIX PF00293.28 AID33099.1 - 1.3e-22 80.3 0.1 1.5e-22 80.0 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain Polysacc_deac_2 PF04748.13 AID33100.1 - 2.4e-64 216.4 0.0 3.1e-64 216.1 0.0 1.1 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase HTH_28 PF13518.6 AID33100.1 - 0.0099 16.0 0.7 0.15 12.2 0.0 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain Peptidase_S41 PF03572.18 AID33101.1 - 1.2e-57 194.1 0.4 1.7e-57 193.6 0.4 1.2 1 0 0 1 1 1 1 Peptidase family S41 PDZ_2 PF13180.6 AID33101.1 - 2.6e-13 50.1 2.2 6.2e-13 48.9 0.5 2.2 2 0 0 2 2 2 1 PDZ domain PDZ_6 PF17820.1 AID33101.1 - 1.3e-12 47.3 0.2 5.7e-12 45.3 0.1 2.2 1 1 1 2 2 2 1 PDZ domain PDZ PF00595.24 AID33101.1 - 3.6e-09 36.8 0.3 1e-08 35.4 0.3 1.8 1 0 0 1 1 1 1 PDZ domain TSP_NTD PF17804.1 AID33101.1 - 0.036 14.3 0.0 0.063 13.5 0.0 1.4 1 0 0 1 1 1 0 Tail specific protease N-terminal domain Tricorn_PDZ PF14685.6 AID33101.1 - 0.069 13.1 0.1 0.21 11.6 0.1 1.9 1 1 0 1 1 1 0 Tricorn protease PDZ domain Peptidase_M23 PF01551.22 AID33102.1 - 3.8e-21 75.1 0.1 9.5e-21 73.8 0.1 1.7 2 0 0 2 2 1 1 Peptidase family M23 AAA_13 PF13166.6 AID33102.1 - 0.18 10.4 10.6 0.24 10.0 10.6 1.0 1 0 0 1 1 1 0 AAA domain ARGLU PF15346.6 AID33102.1 - 0.22 11.4 8.5 0.48 10.3 8.5 1.5 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 Taxilin PF09728.9 AID33102.1 - 0.29 10.3 12.4 0.11 11.6 0.2 2.2 2 0 0 2 2 2 0 Myosin-like coiled-coil protein Sec34 PF04136.15 AID33102.1 - 0.3 11.0 9.3 1.7 8.5 0.3 2.9 2 1 1 3 3 3 0 Sec34-like family MAP65_ASE1 PF03999.12 AID33102.1 - 0.47 9.1 10.7 21 3.6 10.9 2.0 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) SHE3 PF17078.5 AID33102.1 - 1.2 8.8 6.6 1.1 9.0 2.2 2.1 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 HAP1_N PF04849.13 AID33102.1 - 1.3 8.1 14.1 0.022 14.0 1.8 2.1 2 0 0 2 2 2 0 HAP1 N-terminal conserved region DUF1887 PF09002.11 AID33102.1 - 1.8 7.2 8.8 1.9 7.1 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1887) DUF3584 PF12128.8 AID33102.1 - 2.1 5.7 20.6 0.68 7.4 1.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF1664 PF07889.12 AID33102.1 - 2.2 8.3 11.5 4.9 7.2 0.4 3.1 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Goodbye PF17109.5 AID33102.1 - 2.3 8.7 7.0 25 5.4 0.0 3.3 2 2 1 3 3 3 0 fungal STAND N-terminal Goodbye domain DUF2968 PF11180.8 AID33102.1 - 2.9 7.5 29.2 0.14 11.7 4.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) Fmp27_WPPW PF10359.9 AID33102.1 - 3.4 6.4 8.6 4.3 6.1 1.1 2.1 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain Spectrin PF00435.21 AID33102.1 - 3.4 8.2 17.5 0.83 10.2 2.1 2.5 2 1 0 2 2 2 0 Spectrin repeat EzrA PF06160.12 AID33102.1 - 4.7 5.3 10.6 0.094 10.9 0.4 2.1 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA DUF664 PF04978.12 AID33102.1 - 6.6 7.1 8.5 26 5.2 5.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF664) DUF1690 PF07956.11 AID33102.1 - 7.7 6.9 15.5 1.8 9.0 0.6 2.2 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) Nup54 PF13874.6 AID33102.1 - 7.7 6.6 17.7 0.26 11.4 5.6 2.6 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 SPOUT_MTase PF02590.17 AID33104.1 - 1.7e-38 132.0 0.0 1.9e-38 131.9 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase F420H2_quin_red PF04075.14 AID33104.1 - 0.07 13.3 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase RsfS PF02410.15 AID33105.1 - 5.5e-29 100.5 0.0 6.5e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation Phage_holin_2_2 PF10746.9 AID33105.1 - 0.054 13.2 0.0 0.16 11.7 0.0 1.8 2 0 0 2 2 2 0 Phage holin T7 family, holin superfamily II MS_channel PF00924.18 AID33106.1 - 2.1e-49 167.9 0.5 2.1e-49 167.9 0.5 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel TM_helix PF05552.12 AID33106.1 - 5e-05 23.2 1.0 5e-05 23.2 1.0 3.1 3 0 0 3 3 3 1 Conserved TM helix MFS_1 PF07690.16 AID33107.1 - 2.6e-21 75.9 59.0 2.6e-12 46.4 24.1 2.2 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 AID33107.1 - 1.2e-07 30.9 32.4 3.3e-05 23.0 14.5 2.7 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 AID33107.1 - 0.0027 16.6 0.1 0.0027 16.6 0.1 3.0 2 1 1 3 3 3 2 MFS_1 like family MFS_3 PF05977.13 AID33107.1 - 1.6 7.0 36.5 0.01 14.3 11.6 2.1 1 1 1 2 2 2 0 Transmembrane secretion effector CTP_transf_like PF01467.26 AID33108.1 - 2e-27 96.1 0.0 2.4e-27 95.9 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Aldedh PF00171.22 AID33110.1 - 1e-15 57.3 3.3 1.1e-14 53.9 1.4 2.2 2 1 0 2 2 2 2 Aldehyde dehydrogenase family AA_kinase PF00696.28 AID33111.1 - 1.3e-33 116.6 3.0 2.1e-33 116.0 3.0 1.3 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 AID33111.1 - 1.7e-22 79.2 1.2 4.9e-22 77.7 0.3 2.3 2 0 0 2 2 2 1 PUA domain GTP_EFTU_D2 PF03144.25 AID33111.1 - 0.018 15.4 0.4 3.5 8.1 0.0 3.4 2 2 1 3 3 3 0 Elongation factor Tu domain 2 GTP1_OBG PF01018.22 AID33112.1 - 1.2e-58 197.1 2.5 1.7e-58 196.6 2.5 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 AID33112.1 - 5.1e-22 78.1 0.0 9.5e-22 77.2 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 AID33112.1 - 1.3e-09 37.8 0.0 1.1e-08 34.7 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B Exo_endo_phos PF03372.23 AID33113.1 - 7.9e-11 41.9 0.5 1.5e-10 41.0 0.5 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 AID33113.1 - 0.00058 19.7 0.2 0.0034 17.2 0.2 2.0 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Acetyltransf_1 PF00583.25 AID33114.1 - 2.6e-12 47.0 0.0 3.5e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID33114.1 - 1.9e-09 37.5 0.0 2.7e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID33114.1 - 6e-09 36.2 0.1 9.6e-09 35.5 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID33114.1 - 2e-07 31.8 0.0 2.5e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33114.1 - 6e-07 29.3 0.1 1.2e-06 28.4 0.1 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 AID33114.1 - 2.9e-05 24.2 0.0 4.2e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 AID33114.1 - 0.0003 20.5 0.1 0.0004 20.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID33114.1 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 AID33115.1 - 8.1e-27 94.6 0.1 1e-26 94.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33115.1 - 4.6e-08 33.3 0.1 6.5e-08 32.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 AID33115.1 - 7.4e-05 22.5 0.1 9.6e-05 22.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID33115.1 - 8.8e-05 22.7 0.0 0.00012 22.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ribosomal_L27 PF01016.19 AID33116.1 - 1.5e-39 133.9 1.4 1.6e-39 133.7 1.4 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein Ribosomal_L21p PF00829.21 AID33117.1 - 2.3e-35 120.9 1.8 2.3e-35 120.9 1.8 1.8 2 0 0 2 2 2 1 Ribosomal prokaryotic L21 protein HHH_5 PF14520.6 AID33117.1 - 1.6e-08 35.1 0.1 4.5e-08 33.6 0.1 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain DUF4332 PF14229.6 AID33117.1 - 5.5e-05 23.4 0.0 0.00015 22.0 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.9 AID33117.1 - 0.0041 16.9 0.0 0.0091 15.8 0.0 1.5 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Ribosomal_S13 PF00416.22 AID33117.1 - 0.026 14.9 0.3 0.098 13.0 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein S13/S18 PTSIIA_gutA PF03829.13 AID33117.1 - 0.061 13.2 0.1 0.25 11.2 0.0 2.0 2 0 0 2 2 2 0 PTS system glucitol/sorbitol-specific IIA component Homez PF11569.8 AID33117.1 - 0.12 11.9 0.1 0.23 11.0 0.1 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez Cdd1 PF11731.8 AID33117.1 - 0.13 12.5 0.0 0.25 11.6 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus RQC PF09382.10 AID33119.1 - 1.5e-26 92.4 0.0 2.8e-26 91.5 0.0 1.5 1 0 0 1 1 1 1 RQC domain HRDC PF00570.23 AID33119.1 - 1.9e-20 72.6 0.3 6.8e-20 70.8 0.1 2.1 2 0 0 2 2 2 1 HRDC domain DEAD PF00270.29 AID33119.1 - 7.7e-19 68.1 0.0 1.2e-18 67.5 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AID33119.1 - 1.5e-18 67.1 0.0 1.4e-17 64.0 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 AID33119.1 - 1.2e-17 64.4 2.8 1.7e-17 63.8 1.6 2.0 2 0 0 2 2 2 1 RecQ zinc-binding ResIII PF04851.15 AID33119.1 - 0.0058 16.6 0.0 0.021 14.8 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 AID33119.1 - 0.016 15.5 0.2 0.44 10.8 0.0 2.8 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 AID33119.1 - 0.043 13.5 0.0 0.087 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain Aldedh PF00171.22 AID33120.1 - 8.8e-51 172.8 0.0 1e-50 172.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Cupin_2 PF07883.11 AID33121.1 - 3.8e-13 49.0 0.7 6.3e-13 48.2 0.7 1.5 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID33121.1 - 9.7e-06 25.5 0.2 0.0002 21.3 0.1 2.3 1 1 1 2 2 2 1 AraC-like ligand binding domain Cupin_1 PF00190.22 AID33121.1 - 0.00091 18.9 0.0 0.0013 18.4 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.12 AID33121.1 - 0.0045 16.7 0.1 0.0095 15.6 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 AID33121.1 - 0.0045 16.8 0.0 0.0064 16.3 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.8 AID33121.1 - 0.0064 16.7 0.0 0.009 16.2 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like PH_3 PF14593.6 AID33121.1 - 0.25 11.5 0.0 0.34 11.0 0.0 1.2 1 0 0 1 1 1 0 PH domain adh_short_C2 PF13561.6 AID33122.1 - 4e-56 190.2 2.6 4.6e-56 190.0 2.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33122.1 - 8.3e-52 175.5 0.4 9.8e-52 175.2 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33122.1 - 1.2e-11 44.9 0.5 1.6e-11 44.4 0.5 1.2 1 0 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 AID33122.1 - 0.016 14.4 0.2 0.038 13.1 0.2 1.7 1 1 0 1 1 1 0 RmlD substrate binding domain Epimerase PF01370.21 AID33122.1 - 0.026 14.0 0.1 0.041 13.4 0.1 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family LDcluster4 PF18306.1 AID33122.1 - 0.11 12.1 1.8 0.19 11.3 1.8 1.3 1 0 0 1 1 1 0 SLOG cluster4 family UxaC PF02614.14 AID33123.1 - 2e-70 238.0 0.0 2.5e-70 237.7 0.0 1.0 1 0 0 1 1 1 1 Glucuronate isomerase Arg_decarbox_C PF17944.1 AID33123.1 - 0.071 13.7 0.5 71 4.1 0.0 3.4 3 0 0 3 3 3 0 Arginine decarboxylase C-terminal helical extension Mannitol_dh_C PF08125.13 AID33124.1 - 2.2e-71 240.2 0.0 2.9e-71 239.8 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 AID33124.1 - 8e-42 143.0 0.0 1.3e-41 142.3 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain ATP-synt_DE_N PF02823.16 AID33125.1 - 2.4e-21 75.4 0.2 2.9e-21 75.1 0.2 1.1 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_ab PF00006.25 AID33126.1 - 1.1e-63 214.7 0.0 1.9e-63 214.0 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 AID33126.1 - 1.7e-23 82.9 1.5 3.3e-23 82.0 1.5 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain NB-ARC PF00931.22 AID33126.1 - 0.0045 16.2 0.7 0.011 14.9 0.1 1.8 2 0 0 2 2 2 1 NB-ARC domain RsgA_GTPase PF03193.16 AID33126.1 - 0.014 15.3 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase T3SS_ATPase_C PF18269.1 AID33126.1 - 0.016 15.1 0.7 0.092 12.6 0.7 2.1 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain AAA_16 PF13191.6 AID33126.1 - 0.02 15.3 0.1 0.085 13.2 0.1 2.1 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 AID33126.1 - 0.032 14.2 0.3 0.1 12.5 0.1 1.8 2 0 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 AID33126.1 - 0.045 13.7 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ATPase PF06745.13 AID33126.1 - 0.046 13.1 0.7 0.1 11.9 0.7 1.6 1 0 0 1 1 1 0 KaiC AAA_19 PF13245.6 AID33126.1 - 0.077 13.3 0.2 0.26 11.6 0.2 1.9 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID33126.1 - 0.084 13.3 0.6 3 8.3 0.0 2.9 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) RnfC_N PF13375.6 AID33126.1 - 0.13 12.3 2.0 0.23 11.4 0.0 2.4 3 0 0 3 3 3 0 RnfC Barrel sandwich hybrid domain AAA_7 PF12775.7 AID33126.1 - 0.13 11.7 0.0 0.28 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RNA_helicase PF00910.22 AID33126.1 - 0.17 12.3 0.0 0.35 11.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ATP-synt PF00231.19 AID33127.1 - 6.1e-92 308.3 0.2 6.8e-92 308.1 0.2 1.0 1 0 0 1 1 1 1 ATP synthase T3SSipB PF16535.5 AID33127.1 - 0.037 14.5 1.6 0.34 11.4 0.4 2.2 2 0 0 2 2 2 0 Type III cell invasion protein SipB ATP-synt_ab PF00006.25 AID33128.1 - 1.2e-71 240.8 0.0 2.3e-71 239.9 0.0 1.5 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 AID33128.1 - 1.7e-49 167.3 0.3 2.8e-49 166.6 0.3 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 AID33128.1 - 1.5e-19 70.3 3.7 3.6e-19 69.0 3.7 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 AID33128.1 - 8.2e-05 22.7 1.1 0.00019 21.5 1.1 1.7 1 0 0 1 1 1 1 HAS barrel domain TniB PF05621.11 AID33128.1 - 0.017 14.5 0.0 0.035 13.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein OSCP PF00213.18 AID33129.1 - 3.1e-50 170.6 1.7 3.5e-50 170.5 1.7 1.0 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit DUF4345 PF14248.6 AID33130.1 - 8.7e-11 41.8 11.2 1.3e-10 41.2 11.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4345) DUF2627 PF11118.8 AID33130.1 - 0.23 12.0 5.2 0.35 11.5 2.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Asp_Glu_race PF01177.22 AID33131.1 - 4.7e-56 190.1 0.0 5.3e-56 190.0 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Peripla_BP_1 PF00532.21 AID33131.1 - 0.02 14.3 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family Pantoate_transf PF02548.15 AID33131.1 - 0.039 13.3 1.3 0.039 13.3 0.3 1.4 2 0 0 2 2 2 0 Ketopantoate hydroxymethyltransferase PriA_3primeBD PF17764.1 AID33132.1 - 1.1e-20 73.4 0.1 2e-20 72.5 0.1 1.5 1 0 0 1 1 1 1 3′ DNA-binding domain (3′BD) PriA_C PF18074.1 AID33132.1 - 3.3e-16 59.9 0.0 1.1e-15 58.2 0.0 1.9 2 0 0 2 2 1 1 Primosomal protein N C-terminal domain DEAD PF00270.29 AID33132.1 - 1.8e-10 40.9 0.0 1.1e-09 38.3 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase PriA_CRR PF18319.1 AID33132.1 - 1.2e-09 38.0 5.1 1.2e-09 38.0 5.1 2.1 2 0 0 2 2 2 1 PriA DNA helicase Cys-rich region (CRR) domain Helicase_C PF00271.31 AID33132.1 - 1.2e-08 35.3 0.0 0.0011 19.2 0.0 2.7 3 0 0 3 3 3 2 Helicase conserved C-terminal domain ResIII PF04851.15 AID33132.1 - 1.5e-06 28.4 0.0 3.9e-06 27.0 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit zinc-ribbons_6 PF07191.12 AID33132.1 - 0.00029 20.7 3.4 0.00061 19.7 3.4 1.5 1 0 0 1 1 1 1 zinc-ribbons AAA_30 PF13604.6 AID33132.1 - 0.015 15.0 0.0 0.03 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mu-like_Com PF10122.9 AID33132.1 - 0.027 13.9 0.1 0.1 12.1 0.1 2.0 1 0 0 1 1 1 0 Mu-like prophage protein Com TrwB_AAD_bind PF10412.9 AID33132.1 - 0.089 11.7 0.0 0.15 10.9 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain zf-UDP PF14569.6 AID33132.1 - 0.17 12.0 4.3 0.35 11.0 4.3 1.4 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-CHY PF05495.12 AID33132.1 - 0.65 10.5 5.8 1.2 9.7 5.8 1.3 1 0 0 1 1 1 0 CHY zinc finger TF_Zn_Ribbon PF08271.12 AID33132.1 - 2.3 7.8 7.2 3.4 7.3 1.1 2.8 2 1 0 2 2 2 0 TFIIB zinc-binding Auto_anti-p27 PF06677.12 AID33132.1 - 2.5 8.3 5.9 1 9.6 0.9 2.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TAL_FSA PF00923.19 AID33133.1 - 6.3e-59 199.7 3.1 5.2e-58 196.7 3.1 2.0 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase ALAD PF00490.21 AID33133.1 - 0.0051 16.0 0.5 0.6 9.2 0.0 2.2 1 1 1 2 2 2 2 Delta-aminolevulinic acid dehydratase FtsK_gamma PF09397.10 AID33134.1 - 5.3e-09 35.8 0.0 6.2e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Ftsk gamma domain FtsK_SpoIIIE PF01580.18 AID33135.1 - 6.4e-65 218.9 0.1 1e-64 218.2 0.1 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family FtsK_alpha PF17854.1 AID33135.1 - 1.2e-27 95.9 0.0 2.2e-27 95.1 0.0 1.4 1 0 0 1 1 1 1 FtsK alpha domain FtsK_gamma PF09397.10 AID33135.1 - 2.3e-08 33.7 0.0 5.1e-08 32.6 0.0 1.6 1 0 0 1 1 1 1 Ftsk gamma domain AAA_10 PF12846.7 AID33135.1 - 1e-05 24.7 0.0 0.0098 14.8 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 AID33135.1 - 0.0028 17.8 0.0 0.0047 17.0 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain T2SSE PF00437.20 AID33135.1 - 0.0037 16.4 0.1 0.0091 15.1 0.0 1.6 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.6 AID33135.1 - 0.0042 17.4 0.0 0.021 15.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.9 AID33135.1 - 0.008 15.1 0.1 0.042 12.8 0.0 2.1 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain DEAD PF00270.29 AID33135.1 - 0.03 14.1 0.1 0.08 12.7 0.1 1.7 1 1 0 1 1 1 0 DEAD/DEAH box helicase ResIII PF04851.15 AID33135.1 - 0.055 13.5 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 AID33135.1 - 0.069 13.5 0.5 0.25 11.7 0.5 1.9 1 1 0 1 1 1 0 AAA domain LptE PF04390.12 AID33136.1 - 6.9e-08 33.1 0.9 9.6e-08 32.7 0.9 1.2 1 0 0 1 1 1 1 Lipopolysaccharide-assembly tRNA-synt_1_2 PF13603.6 AID33137.1 - 4.4e-68 228.4 0.0 6.4e-68 227.9 0.0 1.2 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 AID33137.1 - 3.3e-59 200.7 6.2 1.2e-23 83.3 2.9 6.0 2 1 2 5 5 5 5 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 AID33137.1 - 1e-29 103.5 0.0 4.7e-19 68.4 0.0 4.4 3 1 1 4 4 4 4 tRNA synthetases class I (M) Anticodon_1 PF08264.13 AID33137.1 - 8.9e-19 68.0 0.0 1.9e-18 66.9 0.0 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 AID33137.1 - 1.3e-06 27.6 0.0 0.0075 15.2 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 AID33137.1 - 9.7e-05 21.8 0.0 0.07 12.5 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Peripla_BP_3 PF13377.6 AID33137.1 - 0.063 13.6 0.1 0.14 12.5 0.1 1.5 1 0 0 1 1 1 0 Periplasmic binding protein-like domain Ala_racemase_N PF01168.20 AID33138.1 - 1.6e-22 80.3 0.1 2.1e-22 79.9 0.1 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain ZapD PF07072.11 AID33138.1 - 0.16 11.7 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Cell division protein Aldo_ket_red PF00248.21 AID33139.1 - 2.3e-16 59.8 0.0 2.5e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Aldo_ket_red PF00248.21 AID33140.1 - 1.1e-55 189.0 0.0 1.2e-55 188.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family LacI PF00356.21 AID33140.1 - 0.036 13.8 0.4 0.077 12.8 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_23 PF13384.6 AID33140.1 - 0.1 12.4 0.1 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain LysR_substrate PF03466.20 AID33141.1 - 1.4e-45 155.2 4.3 1.4e-45 155.2 4.3 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID33141.1 - 3.9e-21 74.8 1.6 8.8e-21 73.6 1.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID33141.1 - 0.0021 17.9 0.3 0.0079 16.1 0.3 2.0 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 AID33141.1 - 0.016 15.3 1.0 0.028 14.5 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain MFS_1 PF07690.16 AID33142.1 - 3.7e-38 131.4 59.6 8.6e-36 123.6 49.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 AID33142.1 - 0.00029 20.2 47.3 0.00037 19.9 47.3 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 AID33142.1 - 0.041 12.7 0.0 0.041 12.7 0.0 3.1 2 1 0 3 3 3 0 MFS_1 like family DUF2840 PF11000.8 AID33142.1 - 0.1 12.4 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) Lipase_GDSL_2 PF13472.6 AID33143.1 - 2e-24 87.0 0.2 3.2e-24 86.3 0.2 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID33143.1 - 4.4e-08 33.4 0.0 6.4e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Aldo_ket_red PF00248.21 AID33144.1 - 2.8e-74 250.0 0.0 3.1e-74 249.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family PGA_cap PF09587.10 AID33144.1 - 0.081 12.4 0.0 0.17 11.3 0.0 1.5 1 1 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap Usg PF06233.12 AID33145.1 - 1.3e-41 140.6 0.6 1.5e-41 140.4 0.6 1.0 1 0 0 1 1 1 1 Usg-like family AMP-binding PF00501.28 AID33146.1 - 7.6e-93 311.4 0.1 9.1e-93 311.1 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID33146.1 - 3.8e-25 88.7 0.1 7.3e-25 87.8 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 AID33146.1 - 1.2e-19 70.0 2.1 2.8e-19 68.8 2.1 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus MOSC PF03473.17 AID33147.1 - 8.2e-15 55.0 0.0 1.3e-14 54.3 0.0 1.3 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 AID33147.1 - 1.9e-06 27.8 0.0 3.5e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain CMAS PF02353.20 AID33148.1 - 0.0012 18.3 0.0 0.0013 18.1 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase CMAS PF02353.20 AID33149.1 - 5e-81 272.0 0.0 6.9e-81 271.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 AID33149.1 - 6.9e-14 52.3 0.1 2.3e-13 50.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID33149.1 - 1.8e-13 51.0 0.0 4e-13 49.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID33149.1 - 8.4e-12 45.2 0.0 1.2e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID33149.1 - 2.1e-09 37.4 0.0 4.3e-09 36.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33149.1 - 2.1e-09 38.0 0.0 4.9e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID33149.1 - 0.00049 19.5 0.0 0.00073 18.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 AID33149.1 - 0.00097 18.7 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 AID33149.1 - 0.0047 16.7 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DOT1 PF08123.13 AID33149.1 - 0.0065 16.0 0.0 0.01 15.4 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 MetW PF07021.12 AID33149.1 - 0.023 14.3 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 AID33149.1 - 0.035 14.0 0.0 0.055 13.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 AID33149.1 - 0.041 13.9 0.1 0.16 11.9 0.0 1.9 1 1 1 2 2 2 0 Zinc-binding dehydrogenase GCD14 PF08704.10 AID33149.1 - 0.081 12.6 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_8 PF05148.15 AID33149.1 - 0.12 12.2 0.0 0.67 9.8 0.0 2.0 1 1 0 1 1 1 0 Hypothetical methyltransferase PrmA PF06325.13 AID33149.1 - 0.24 10.8 0.0 0.35 10.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) VWA PF00092.28 AID33150.1 - 1.2e-08 35.4 0.0 7.6e-05 23.0 0.0 2.5 2 0 0 2 2 2 2 von Willebrand factor type A domain VWA_2 PF13519.6 AID33150.1 - 9.8e-06 26.2 0.0 0.0055 17.3 0.0 2.8 2 0 0 2 2 2 2 von Willebrand factor type A domain Tad PF13400.6 AID33150.1 - 0.00057 20.1 2.8 0.0016 18.7 2.8 1.8 1 0 0 1 1 1 1 Putative Flp pilus-assembly TadE/G-like Transglut_core PF01841.19 AID33151.1 - 4e-21 75.6 0.1 6.1e-21 75.0 0.1 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 AID33151.1 - 0.18 11.3 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Transglutaminase-like domain HAD_2 PF13419.6 AID33152.1 - 2.4e-16 60.3 0.0 3e-16 60.0 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID33152.1 - 4.3e-13 50.0 0.6 3.7e-10 40.4 0.6 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID33152.1 - 5.5e-05 23.7 0.2 0.00011 22.6 0.1 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID33152.1 - 0.0073 16.3 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like DUF1674 PF07896.12 AID33153.1 - 4.7e-15 55.8 1.2 8e-15 55.1 1.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1674) Peptidase_M48 PF01435.18 AID33154.1 - 4.4e-42 144.1 0.3 6.5e-42 143.5 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 AID33154.1 - 0.0003 20.1 0.0 0.00053 19.3 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 Phage_holin_3_3 PF16083.5 AID33154.1 - 0.067 13.3 0.3 0.067 13.3 0.3 2.6 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III LPD22 PF18834.1 AID33154.1 - 0.12 12.6 2.6 0.55 10.5 0.9 2.6 2 2 0 2 2 2 0 Large polyvalent protein associated domain 22 BSP PF04450.12 AID33154.1 - 0.21 11.3 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria COX7C PF02935.16 AID33154.1 - 0.57 10.5 3.7 7.6 6.9 0.1 2.5 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIIc DUF2207 PF09972.9 AID33154.1 - 1.4 7.6 2.4 2.2 6.9 0.0 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Methyltr_RsmB-F PF01189.17 AID33155.1 - 5.8e-42 143.6 0.0 9.3e-42 142.9 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F NusB PF01029.18 AID33155.1 - 4.6e-15 56.0 0.0 7.1e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 NusB family Methyltransf_25 PF13649.6 AID33155.1 - 1.9e-06 28.5 0.2 1.2e-05 25.9 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID33155.1 - 1.9e-06 27.7 0.0 3.4e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID33155.1 - 5.6e-05 23.7 0.1 0.0005 20.7 0.1 2.4 1 1 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 AID33155.1 - 8.6e-05 22.7 0.0 0.00016 21.8 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase adh_short PF00106.25 AID33155.1 - 0.0076 15.7 0.0 0.043 13.3 0.0 2.0 2 0 0 2 2 2 1 short chain dehydrogenase MTS PF05175.14 AID33155.1 - 0.014 15.0 0.0 0.029 13.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_15 PF09445.10 AID33155.1 - 0.024 14.2 0.0 0.038 13.6 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase ADH_zinc_N PF00107.26 AID33155.1 - 0.13 12.3 0.0 18 5.3 0.0 2.5 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Hepar_II_III PF07940.13 AID33156.1 - 1.1e-62 211.8 0.8 3.5e-62 210.1 0.6 1.8 2 0 0 2 2 2 1 Heparinase II/III-like protein Hepar_II_III_N PF16889.5 AID33156.1 - 0.0082 15.4 0.0 0.02 14.2 0.0 1.5 2 0 0 2 2 2 1 Heparinase II/III N-terminus ABM PF03992.16 AID33157.1 - 2.8e-05 24.2 0.1 3.3e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase AICARFT_IMPCHas PF01808.18 AID33158.1 - 6e-117 390.3 0.5 7.7e-117 390.0 0.5 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 AID33158.1 - 1.4e-25 89.3 0.0 3.6e-25 88.0 0.0 1.7 2 0 0 2 2 2 1 MGS-like domain ATG22 PF11700.8 AID33159.1 - 2e-34 119.1 28.5 6.5e-31 107.5 20.7 3.0 1 1 1 2 2 2 2 Vacuole effluxer Atg22 like MFS_1 PF07690.16 AID33159.1 - 7.5e-13 48.1 46.1 7.5e-13 48.1 46.1 2.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Bac_GDH PF05088.12 AID33160.1 - 1.3e-166 556.6 0.0 1.5e-166 556.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase ELFV_dehydrog PF00208.21 AID33160.1 - 1.5e-06 28.1 0.1 2.8e-06 27.2 0.1 1.4 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 AID33161.1 - 0 1235.2 0.0 0 1234.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase CMD PF02627.20 AID33162.1 - 2.1e-13 50.1 1.2 1.3e-10 41.2 0.1 2.2 1 1 1 2 2 2 2 Carboxymuconolactone decarboxylase family PA26 PF04636.13 AID33162.1 - 0.013 14.5 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) YCII PF03795.14 AID33163.1 - 8.5e-05 22.9 0.0 0.00018 21.9 0.0 1.6 1 1 0 1 1 1 1 YCII-related domain LysE PF01810.18 AID33164.1 - 9.8e-25 87.1 19.8 1.3e-24 86.8 19.8 1.2 1 0 0 1 1 1 1 LysE type translocator Phosphoesterase PF04185.14 AID33165.1 - 1.2e-33 116.8 3.1 2e-30 106.2 0.0 3.1 1 1 1 2 2 2 2 Phosphoesterase family Sulfatase PF00884.23 AID33165.1 - 0.0037 16.7 0.0 0.0064 15.9 0.0 1.4 1 1 0 1 1 1 1 Sulfatase DUF1062 PF06353.12 AID33166.1 - 1.3e-40 139.3 0.0 1.9e-40 138.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1062) TFIIS_C PF01096.18 AID33166.1 - 0.21 11.5 5.6 2.1 8.3 5.6 2.2 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) GTP_EFTU PF00009.27 AID33167.1 - 4.6e-57 192.7 0.0 6.8e-57 192.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 AID33167.1 - 6.6e-21 74.1 0.0 1.4e-20 73.1 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AID33167.1 - 2.9e-16 59.6 3.8 3.8e-15 56.0 0.4 2.7 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 AID33167.1 - 1e-06 28.8 0.1 2.2e-06 27.7 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 AID33167.1 - 0.0032 17.5 0.4 0.0075 16.3 0.0 1.8 2 0 0 2 2 2 1 Elongation Factor G, domain II Septin PF00735.18 AID33167.1 - 0.0038 16.6 0.0 0.0063 15.8 0.0 1.3 1 0 0 1 1 1 1 Septin FeoB_N PF02421.18 AID33167.1 - 0.048 13.2 0.0 0.73 9.4 0.1 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B Dynamin_N PF00350.23 AID33167.1 - 0.053 13.6 0.0 0.37 10.8 0.0 2.1 1 1 0 1 1 1 0 Dynamin family GTP_EFTU_D4 PF14578.6 AID33167.1 - 0.061 13.2 0.9 0.21 11.5 0.1 2.3 2 0 0 2 2 2 0 Elongation factor Tu domain 4 AIG1 PF04548.16 AID33167.1 - 0.074 12.4 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 AIG1 family SRPRB PF09439.10 AID33167.1 - 0.097 12.1 0.1 0.28 10.6 0.1 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ribosomal_L6 PF00347.23 AID33167.1 - 0.73 10.6 3.6 0.58 10.9 0.8 2.3 2 0 0 2 2 2 0 Ribosomal protein L6 MFS_1 PF07690.16 AID33169.1 - 7.4e-41 140.2 60.9 4.4e-35 121.2 39.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily TetR_N PF00440.23 AID33170.1 - 9.7e-17 60.5 0.0 1.9e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family DUF3879 PF12995.7 AID33170.1 - 0.012 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3879) TetR_C_31 PF17940.1 AID33170.1 - 0.073 13.3 1.1 0.18 12.0 0.4 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Pyrophosphatase PF00719.19 AID33172.1 - 1.3e-52 177.8 0.0 1.5e-52 177.6 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase Acetyltransf_1 PF00583.25 AID33173.1 - 5.8e-14 52.3 0.3 7.3e-14 52.0 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID33173.1 - 1.4e-10 41.1 0.0 1.8e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID33173.1 - 2.8e-08 34.1 0.4 4.1e-08 33.5 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33173.1 - 5.6e-08 32.6 0.1 1.2e-07 31.6 0.0 1.5 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 AID33173.1 - 0.014 15.6 0.0 0.016 15.4 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain AdoHcyase_NAD PF00670.21 AID33173.1 - 0.075 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Acetyltransf_CG PF14542.6 AID33173.1 - 0.13 12.4 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 AID33173.1 - 0.18 11.3 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase TPM_phosphatase PF04536.14 AID33174.1 - 1.3e-07 31.8 0.0 9.1e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 TPM domain DUF3377 PF11857.8 AID33174.1 - 0.096 12.6 0.7 0.28 11.2 0.7 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) DUF5130 PF17174.4 AID33174.1 - 0.11 12.7 1.6 0.15 12.3 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5130) CPP1-like PF11833.8 AID33174.1 - 0.16 11.6 4.7 0.28 10.8 4.7 1.3 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF2583 PF10762.9 AID33174.1 - 0.51 10.8 3.2 0.98 9.9 3.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2583) TPM_phosphatase PF04536.14 AID33175.1 - 5.7e-36 123.4 0.0 7e-36 123.1 0.0 1.1 1 0 0 1 1 1 1 TPM domain MOLO1 PF17175.4 AID33175.1 - 0.096 12.8 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Modulator of levamisole receptor-1 LemA PF04011.12 AID33176.1 - 6.9e-57 191.5 0.2 8.1e-57 191.3 0.2 1.0 1 0 0 1 1 1 1 LemA family MWFE PF15879.5 AID33176.1 - 0.14 12.4 0.0 4.1 7.6 0.0 2.3 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit Phos_pyr_kin PF08543.12 AID33178.1 - 1.7e-13 50.5 0.0 2.3e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 AID33178.1 - 1.1e-07 31.5 0.0 2.1e-07 30.6 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DUF429 PF04250.13 AID33179.1 - 6.1e-51 173.2 0.2 1.3e-50 172.1 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF429) Pro_CA PF00484.19 AID33180.1 - 1.2e-47 162.1 0.0 1.4e-47 161.9 0.0 1.0 1 0 0 1 1 1 1 Carbonic anhydrase DUF4440 PF14534.6 AID33181.1 - 0.00028 21.3 0.1 0.00038 20.8 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 AID33181.1 - 0.017 15.7 0.1 0.029 15.0 0.1 1.5 1 1 0 1 1 1 0 SnoaL-like domain SnoaL_3 PF13474.6 AID33181.1 - 0.051 13.8 0.1 0.084 13.1 0.1 1.4 1 1 0 1 1 1 0 SnoaL-like domain Peptidase_M3 PF01432.20 AID33182.1 - 1e-117 394.2 0.0 1.3e-117 393.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M32 PF02074.15 AID33182.1 - 0.13 11.1 0.0 6.2 5.5 0.0 2.3 2 0 0 2 2 2 0 Carboxypeptidase Taq (M32) metallopeptidase DUF1485 PF07364.12 AID33183.1 - 9.4e-85 284.4 0.4 1.2e-84 284.1 0.4 1.1 1 0 0 1 1 1 1 Metallopeptidase family M81 MlrC_C PF07171.12 AID33183.1 - 5.8e-48 163.4 0.0 8.8e-48 162.8 0.0 1.3 1 0 0 1 1 1 1 MlrC C-terminus ABC_ATPase PF09818.9 AID33183.1 - 0.005 15.7 0.0 0.0068 15.3 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class Toprim_3 PF13362.6 AID33183.1 - 0.13 12.7 0.1 0.34 11.3 0.1 1.8 1 0 0 1 1 1 0 Toprim domain BPD_transp_1 PF00528.22 AID33184.1 - 6.4e-18 65.1 18.8 6.4e-18 65.1 18.8 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33185.1 - 3.4e-13 49.7 19.1 3.4e-13 49.7 19.1 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Oxidored_q4 PF00507.19 AID33185.1 - 0.28 11.3 4.3 2.1 8.6 1.1 2.8 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SBP_bac_1 PF01547.25 AID33186.1 - 2.7e-54 185.2 9.5 3.8e-54 184.8 9.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID33186.1 - 3e-48 165.0 7.2 5.3e-48 164.3 7.2 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID33186.1 - 2.8e-10 40.0 0.2 0.00053 19.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID33186.1 - 8e-07 29.0 0.0 1.9e-06 27.8 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein adh_short_C2 PF13561.6 AID33187.1 - 1.5e-48 165.4 3.6 1.8e-48 165.1 3.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33187.1 - 1.7e-39 135.3 0.6 2.7e-39 134.7 0.6 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 AID33187.1 - 1.2e-05 24.9 0.5 2e-05 24.2 0.5 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 AID33187.1 - 8.4e-05 21.8 0.2 0.00012 21.3 0.2 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain KR PF08659.10 AID33187.1 - 0.00094 19.1 6.8 0.026 14.4 6.8 2.3 1 1 0 1 1 1 1 KR domain ELFV_dehydrog PF00208.21 AID33187.1 - 0.012 15.3 1.3 0.014 15.1 0.1 1.7 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.18 AID33187.1 - 0.04 13.8 1.2 0.07 13.0 0.3 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 AID33187.1 - 0.042 13.2 0.0 0.086 12.2 0.0 1.5 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 2-Hacid_dh_C PF02826.19 AID33187.1 - 0.048 13.0 0.1 0.077 12.4 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 AID33187.1 - 0.057 13.4 0.1 0.16 11.9 0.1 1.8 1 0 0 1 1 1 0 Zinc-binding dehydrogenase ABC_tran PF00005.27 AID33188.1 - 2.8e-30 105.6 0.0 5.3e-30 104.7 0.0 1.5 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 AID33188.1 - 3.2e-09 37.0 0.1 0.0017 18.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33188.1 - 2.1e-08 33.9 0.0 7.7e-08 32.0 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_2 PF08402.10 AID33188.1 - 2.3e-08 34.1 0.2 5.3e-08 32.9 0.2 1.7 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID33188.1 - 2.1e-07 31.6 0.0 5.8e-07 30.2 0.0 1.8 1 0 0 1 1 1 1 MalK OB fold domain RsgA_GTPase PF03193.16 AID33188.1 - 1.8e-05 24.7 0.5 8.2e-05 22.6 0.1 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID33188.1 - 0.00011 22.7 0.1 0.0002 21.8 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain PhoH PF02562.16 AID33188.1 - 0.00056 19.4 0.0 0.098 12.1 0.0 2.2 2 0 0 2 2 2 1 PhoH-like protein TOBE PF03459.17 AID33188.1 - 0.00094 19.4 0.1 0.0021 18.3 0.1 1.6 1 0 0 1 1 1 1 TOBE domain AAA_22 PF13401.6 AID33188.1 - 0.00098 19.4 0.0 0.0024 18.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 AID33188.1 - 0.0013 18.7 0.0 0.0022 18.0 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_23 PF13476.6 AID33188.1 - 0.0016 19.0 0.0 0.0032 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33188.1 - 0.0027 17.9 0.0 0.005 17.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID33188.1 - 0.0032 17.2 0.0 0.0073 16.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID33188.1 - 0.0034 17.2 0.0 0.017 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 AID33188.1 - 0.0044 17.3 0.3 0.024 14.9 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 AID33188.1 - 0.0046 16.6 0.0 0.01 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 AID33188.1 - 0.0064 16.5 0.1 0.019 15.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 AID33188.1 - 0.018 15.4 0.2 0.069 13.6 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 AID33188.1 - 0.026 14.6 0.1 0.073 13.2 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID33188.1 - 0.029 14.9 0.0 0.054 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID33188.1 - 0.032 14.2 0.2 0.07 13.0 0.0 1.6 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 AID33188.1 - 0.035 14.5 0.0 0.084 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID33188.1 - 0.043 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 AID33188.1 - 0.065 12.0 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein RNA_helicase PF00910.22 AID33188.1 - 0.086 13.2 0.1 0.18 12.2 0.1 1.5 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 AID33188.1 - 0.094 12.1 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MIT_C PF16565.5 AID33188.1 - 0.1 12.6 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT ATPase_2 PF01637.18 AID33188.1 - 0.1 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 AID33188.1 - 0.11 12.5 0.1 0.36 10.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 AID33188.1 - 0.14 11.5 0.1 1.1 8.4 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin AAA_24 PF13479.6 AID33188.1 - 0.46 10.2 1.1 1.2 8.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain HTH_6 PF01418.17 AID33189.1 - 6.2e-18 64.6 0.1 2.6e-17 62.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 AID33189.1 - 3.4e-15 56.1 0.6 3.4e-15 56.1 0.6 1.7 2 0 0 2 2 2 1 SIS domain SIS_2 PF13580.6 AID33189.1 - 5.7e-07 29.6 5.6 7.4e-05 22.8 0.2 2.6 1 1 1 2 2 2 2 SIS domain HTH_AsnC-type PF13404.6 AID33189.1 - 0.0024 17.6 1.8 0.0087 15.9 0.3 2.7 2 1 1 3 3 2 1 AsnC-type helix-turn-helix domain HTH_IclR PF09339.10 AID33189.1 - 0.0049 16.6 0.0 0.019 14.8 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 AID33189.1 - 0.0051 16.7 0.0 0.051 13.5 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID33189.1 - 0.0053 16.3 0.0 0.014 14.9 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 AID33189.1 - 0.006 16.3 0.0 0.018 14.8 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 AID33189.1 - 0.011 15.2 1.0 0.12 11.8 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Fe_dep_repress PF01325.19 AID33189.1 - 0.013 15.7 0.0 0.53 10.5 0.0 2.7 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 AID33189.1 - 0.018 14.9 0.1 0.071 13.0 0.0 2.1 1 1 1 2 2 2 0 MarR family LacI PF00356.21 AID33189.1 - 0.038 13.8 0.2 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_22 PF13309.6 AID33189.1 - 0.054 13.6 0.4 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 HTH domain HTH_28 PF13518.6 AID33189.1 - 0.072 13.2 0.0 0.19 11.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 AID33189.1 - 0.092 12.8 0.0 6.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix TetR_N PF00440.23 AID33189.1 - 0.14 12.0 1.7 0.5 10.2 0.1 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family DUF167 PF02594.16 AID33190.1 - 5.6e-23 80.9 0.2 6.6e-23 80.6 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 YGGT PF02325.17 AID33191.1 - 2.4e-22 79.1 8.5 3.1e-22 78.8 8.5 1.2 1 0 0 1 1 1 1 YGGT family Nitroreductase PF00881.24 AID33194.1 - 7.6e-17 61.9 0.0 1.4e-16 61.1 0.0 1.4 1 0 0 1 1 1 1 Nitroreductase family TonB_C PF03544.14 AID33197.1 - 4.6e-18 65.4 0.1 1.2e-17 64.1 0.1 1.7 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal TonB_2 PF13103.6 AID33197.1 - 4.9e-09 36.3 0.8 1e-08 35.3 0.0 1.9 2 0 0 2 2 2 1 TonB C terminal TolA PF06519.11 AID33197.1 - 0.0096 16.1 0.0 0.02 15.1 0.0 1.5 1 0 0 1 1 1 1 TolA C-terminal Varsurf_PPLC PF03490.13 AID33197.1 - 0.033 14.2 0.1 0.068 13.1 0.1 1.4 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C ExbD PF02472.16 AID33198.1 - 4.3e-23 81.9 0.0 5.9e-23 81.5 0.0 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR MotA_ExbB PF01618.16 AID33199.1 - 2.6e-33 114.5 3.4 4.9e-33 113.6 3.4 1.4 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family Isochorismatase PF00857.20 AID33201.1 - 3.9e-41 141.1 0.1 4.7e-41 140.9 0.1 1.1 1 0 0 1 1 1 1 Isochorismatase family Bac_luciferase PF00296.20 AID33202.1 - 8e-32 110.9 2.1 1.7e-30 106.5 1.6 2.1 1 1 1 2 2 2 2 Luciferase-like monooxygenase adh_short_C2 PF13561.6 AID33204.1 - 4.9e-60 203.0 5.9 5.7e-60 202.8 5.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33204.1 - 3.4e-49 166.9 2.4 4.4e-49 166.6 2.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33204.1 - 4.2e-13 49.6 2.4 6.5e-13 49.0 2.4 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID33204.1 - 0.0076 16.1 3.0 0.013 15.4 3.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID33204.1 - 0.084 13.5 3.1 1 10.0 3.2 2.3 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent HI0933_like PF03486.14 AID33204.1 - 1.5 7.4 5.4 2.3 6.8 5.4 1.2 1 0 0 1 1 1 0 HI0933-like protein BPD_transp_2 PF02653.16 AID33205.1 - 3.7e-22 78.8 22.4 4.4e-22 78.5 22.4 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID33206.1 - 2.2e-38 132.0 28.0 2.2e-38 132.0 28.0 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID33208.1 - 1.7e-13 51.2 0.0 2.4e-11 44.3 0.0 2.3 2 0 0 2 2 2 2 ABC transporter ABC_tran PF00005.27 AID33209.1 - 6.6e-19 68.8 0.0 7e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 AID33209.1 - 0.003 18.1 0.0 0.0033 18.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID33209.1 - 0.006 17.0 0.0 0.0067 16.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID33209.1 - 0.0065 16.4 0.0 0.007 16.3 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 AID33209.1 - 0.014 15.2 0.1 0.027 14.2 0.0 1.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_30 PF13604.6 AID33209.1 - 0.024 14.3 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID33209.1 - 0.026 13.9 0.2 0.031 13.7 0.2 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_21 PF13304.6 AID33209.1 - 0.029 14.2 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 AID33209.1 - 0.038 14.1 0.0 0.054 13.6 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase MukB PF04310.12 AID33209.1 - 0.052 13.3 0.1 0.064 13.1 0.1 1.2 1 0 0 1 1 1 0 MukB N-terminal Septin PF00735.18 AID33209.1 - 0.063 12.5 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Septin TsaE PF02367.17 AID33209.1 - 0.091 12.8 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Gtr1_RagA PF04670.12 AID33209.1 - 0.1 12.0 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DLIC PF05783.11 AID33209.1 - 0.11 11.3 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NACHT PF05729.12 AID33209.1 - 0.19 11.6 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 NACHT domain Bmp PF02608.14 AID33210.1 - 6.5e-35 120.6 0.1 8.2e-35 120.2 0.1 1.1 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like TAT_signal PF10518.9 AID33210.1 - 0.059 13.2 8.6 0.073 12.9 4.0 2.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Thiolase_N PF00108.23 AID33211.1 - 4.4e-75 252.4 0.2 5.6e-75 252.0 0.2 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 AID33211.1 - 5.8e-42 142.2 1.3 1.2e-41 141.2 1.3 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 AID33211.1 - 9.9e-05 22.0 0.6 0.00085 19.0 0.1 2.3 2 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 AID33211.1 - 0.097 12.5 0.9 1.8 8.5 0.0 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CoA_trans PF01144.23 AID33212.1 - 2.8e-48 164.2 0.0 3.2e-48 164.0 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase CoA_trans PF01144.23 AID33213.1 - 9.2e-24 84.0 0.1 1.2e-23 83.7 0.1 1.1 1 0 0 1 1 1 1 Coenzyme A transferase aGPT-Pplase3 PF18746.1 AID33213.1 - 0.14 11.5 0.1 0.21 10.9 0.1 1.2 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 IclR PF01614.18 AID33214.1 - 6.9e-36 122.9 0.1 1.4e-35 121.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 AID33214.1 - 2.4e-17 62.5 1.5 6.8e-17 61.0 1.5 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 AID33214.1 - 0.0067 16.3 0.2 0.026 14.4 0.2 2.0 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID33214.1 - 0.0083 15.7 0.1 0.033 13.7 0.0 2.1 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID33214.1 - 0.12 12.3 0.0 0.5 10.3 0.0 2.0 2 0 0 2 2 2 0 HTH domain DAO PF01266.24 AID33215.1 - 1.3e-59 202.5 2.9 1.6e-59 202.3 2.9 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 AID33215.1 - 1.1e-06 28.4 0.5 1.5e-06 27.9 0.5 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID33215.1 - 2.6e-06 26.8 2.9 2.6e-06 26.8 2.9 1.7 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 AID33215.1 - 3.1e-06 26.6 2.1 5.7e-06 25.7 2.1 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 AID33215.1 - 4.7e-05 22.8 1.1 0.00028 20.2 0.8 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID33215.1 - 7e-05 21.7 2.9 0.00039 19.2 1.4 2.0 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 AID33215.1 - 0.00031 20.9 1.4 0.0008 19.6 1.4 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 AID33215.1 - 0.0005 19.3 2.6 0.00083 18.5 2.6 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 AID33215.1 - 0.00056 19.3 4.6 0.012 14.8 2.3 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID33215.1 - 0.0018 17.4 1.0 0.0028 16.8 1.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 AID33215.1 - 0.037 13.3 0.8 0.068 12.4 0.8 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 AID33215.1 - 0.045 13.0 1.4 0.096 11.9 1.4 1.5 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 AID33215.1 - 0.09 13.3 2.7 0.19 12.3 1.3 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 AID33215.1 - 0.24 10.6 1.0 15 4.7 0.2 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 AID33215.1 - 2.6 8.0 4.7 8.9 6.3 1.0 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding Gln-synt_C PF00120.24 AID33216.1 - 2.3e-107 359.0 0.0 2.7e-107 358.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 AID33216.1 - 0.0048 16.7 0.0 0.013 15.3 0.0 1.7 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Peptidase_S26 PF10502.9 AID33216.1 - 0.079 12.7 0.0 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Signal peptidase, peptidase S26 UDPGT PF00201.18 AID33217.1 - 9.3e-10 37.9 0.2 2.8e-09 36.3 0.0 1.8 3 0 0 3 3 3 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 AID33217.1 - 4.5e-05 23.5 0.0 9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain GntR PF00392.21 AID33218.1 - 2.2e-17 62.5 0.8 6.3e-10 38.6 0.0 2.8 2 0 0 2 2 2 2 Bacterial regulatory proteins, gntR family FCD PF07729.12 AID33218.1 - 6.2e-14 52.5 5.9 6.2e-14 52.5 5.9 2.3 3 1 0 3 3 2 1 FCD domain HTH_Crp_2 PF13545.6 AID33218.1 - 1.7e-05 24.7 5.3 0.0017 18.3 0.0 2.9 3 0 0 3 3 3 2 Crp-like helix-turn-helix domain HTH_27 PF13463.6 AID33218.1 - 7.4e-05 23.2 0.1 0.013 16.0 0.1 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 AID33218.1 - 0.00015 21.2 1.2 0.026 14.1 0.1 3.2 2 1 1 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 AID33218.1 - 0.00035 20.5 0.1 0.82 9.7 0.1 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain Rrf2 PF02082.20 AID33218.1 - 0.00041 20.6 0.0 1.3 9.5 0.0 2.4 2 0 0 2 2 2 2 Transcriptional regulator TrmB PF01978.19 AID33218.1 - 0.00095 19.0 0.0 1.3 9.0 0.0 2.8 3 0 0 3 3 3 2 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 AID33218.1 - 0.003 17.5 0.1 1.8 8.5 0.1 2.7 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 AID33218.1 - 0.0037 17.1 3.1 1.1 9.2 0.3 2.9 2 0 0 2 2 2 2 MarR family Phage_rep_O PF04492.13 AID33218.1 - 0.025 15.2 0.0 1.5 9.5 0.0 2.5 2 1 1 3 3 2 0 Bacteriophage replication protein O DUF4423 PF14394.6 AID33218.1 - 0.048 13.4 0.0 0.7 9.6 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4423) Vault PF01505.18 AID33218.1 - 0.05 13.8 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Major Vault Protein repeat domain SgrR_N PF12793.7 AID33218.1 - 0.061 13.5 0.2 0.33 11.2 0.0 2.2 3 0 0 3 3 2 0 Sugar transport-related sRNA regulator N-term HTH_29 PF13551.6 AID33218.1 - 0.07 13.2 1.6 5.6 7.1 0.0 3.1 3 0 0 3 3 3 0 Winged helix-turn helix DUF2795 PF11387.8 AID33218.1 - 0.14 12.4 0.8 24 5.2 0.0 3.4 4 0 0 4 4 3 0 Protein of unknown function (DUF2795) HTH_20 PF12840.7 AID33218.1 - 0.18 11.9 10.4 0.13 12.3 0.5 3.9 4 0 0 4 4 4 0 Helix-turn-helix domain DUF2087 PF09860.9 AID33218.1 - 0.55 10.4 3.3 3.4 7.9 0.0 3.3 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2087) SBP_bac_8 PF13416.6 AID33219.1 - 2.6e-29 102.9 6.3 3.3e-29 102.6 6.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID33219.1 - 2.7e-22 79.4 2.1 4.2e-22 78.8 2.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID33219.1 - 2.1e-18 67.3 4.9 3.2e-18 66.7 4.9 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID33220.1 - 5.8e-14 52.2 28.4 1.5e-12 47.7 28.4 2.6 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33221.1 - 1.1e-15 57.8 20.3 1.1e-15 57.8 20.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component YlaH PF14036.6 AID33221.1 - 0.04 14.3 0.2 0.04 14.3 0.2 3.2 3 1 0 3 3 3 0 YlaH-like protein ABC_tran PF00005.27 AID33222.1 - 2e-34 119.1 0.0 2.9e-34 118.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID33222.1 - 2.8e-16 59.4 0.2 6.1e-16 58.4 0.2 1.6 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID33222.1 - 3.6e-05 23.7 0.1 0.074 12.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33222.1 - 4.4e-05 23.0 0.0 0.0048 16.4 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain TOBE PF03459.17 AID33222.1 - 0.00038 20.7 0.9 0.019 15.2 0.1 2.5 2 0 0 2 2 2 1 TOBE domain AAA_22 PF13401.6 AID33222.1 - 0.0013 19.0 0.2 0.011 16.0 0.2 2.1 1 1 0 1 1 1 1 AAA domain OB_MalK PF17912.1 AID33222.1 - 0.0016 19.3 0.0 0.0061 17.4 0.0 2.1 1 0 0 1 1 1 1 MalK OB fold domain Rad17 PF03215.15 AID33222.1 - 0.0022 17.9 0.0 0.0034 17.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_25 PF13481.6 AID33222.1 - 0.0031 17.1 0.1 0.17 11.4 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID33222.1 - 0.0041 17.5 0.1 0.0095 16.3 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 AID33222.1 - 0.005 17.1 0.1 0.043 14.1 0.0 2.3 3 0 0 3 3 2 1 AAA domain AAA_23 PF13476.6 AID33222.1 - 0.011 16.3 0.0 0.017 15.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID33222.1 - 0.013 15.4 0.0 0.16 11.9 0.1 2.3 2 0 0 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 AID33222.1 - 0.015 15.2 0.0 0.026 14.4 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 AID33222.1 - 0.017 14.9 0.0 0.038 13.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain CysA_C_terminal PF17850.1 AID33222.1 - 0.038 14.6 0.2 0.13 12.9 0.1 2.0 2 0 0 2 2 1 0 CysA C-terminal regulatory domain AAA PF00004.29 AID33222.1 - 0.04 14.3 0.1 0.12 12.8 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID33222.1 - 0.088 12.8 0.1 0.5 10.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SbcCD_C PF13558.6 AID33222.1 - 0.1 12.8 0.1 1.1 9.5 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PduV-EutP PF10662.9 AID33222.1 - 0.16 11.7 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RNA_helicase PF00910.22 AID33222.1 - 0.22 12.0 0.0 1.8 9.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase UDPGT PF00201.18 AID33223.1 - 8.9e-12 44.6 0.0 6.3e-11 41.8 0.0 1.9 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 AID33223.1 - 1.4e-08 34.9 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Cupin_3 PF05899.12 AID33224.1 - 1.6e-23 82.2 0.1 1.9e-23 81.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID33224.1 - 0.0016 18.1 0.1 0.0035 17.0 0.1 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_6 PF12852.7 AID33224.1 - 0.12 12.1 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Cupin Cupin_3 PF05899.12 AID33225.1 - 4.3e-22 77.6 0.0 5.3e-22 77.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID33225.1 - 6.2e-05 22.6 0.0 9.6e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID33225.1 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 AID33226.1 - 6.3e-27 93.1 1.5 8.1e-27 92.7 1.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 AID33226.1 - 9.9e-06 25.2 0.2 1.4e-05 24.7 0.2 1.3 1 0 0 1 1 1 1 Cupin domain Aldedh PF00171.22 AID33227.1 - 1.6e-146 488.5 1.1 2e-146 488.2 1.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 AID33227.1 - 0.0031 16.6 0.0 0.0057 15.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) CaMKII_AD PF08332.10 AID33227.1 - 0.15 12.2 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain 3HCDH_N PF02737.18 AID33228.1 - 7.2e-62 208.5 0.0 1.2e-61 207.8 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 AID33228.1 - 9.1e-42 143.1 1.5 9e-41 139.8 0.3 2.3 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 AID33228.1 - 8.5e-34 116.1 0.0 4e-21 75.4 0.0 2.7 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 AID33228.1 - 5.5e-23 82.0 0.7 1.3e-22 80.8 0.7 1.6 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 AID33228.1 - 0.0012 19.1 1.4 0.0065 16.7 1.4 2.3 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 AID33228.1 - 0.028 15.0 0.1 0.095 13.3 0.1 2.0 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 AID33228.1 - 0.15 11.6 0.0 0.37 10.3 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF2880 PF11082.8 AID33228.1 - 0.56 10.6 4.4 0.26 11.6 0.8 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2880) BPD_transp_2 PF02653.16 AID33230.1 - 7.9e-31 107.2 43.0 7.9e-31 107.2 43.0 1.5 1 1 1 2 2 2 1 Branched-chain amino acid transport system / permease component DUF656 PF04920.12 AID33230.1 - 0.066 13.1 0.1 0.18 11.8 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF656) BPD_transp_2 PF02653.16 AID33231.1 - 6.1e-43 146.9 34.7 6.1e-43 146.9 34.7 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Methyltranf_PUA PF13636.6 AID33231.1 - 0.11 12.5 0.1 0.26 11.3 0.1 1.6 1 0 0 1 1 1 0 RNA-binding PUA-like domain of methyltransferase RsmF Phage_holin_3_1 PF05106.12 AID33231.1 - 1 9.9 4.6 20 5.7 0.2 2.9 2 1 0 2 2 2 0 Phage holin family (Lysis protein S) ABC_tran PF00005.27 AID33232.1 - 2.4e-34 118.8 0.0 2e-23 83.4 0.0 2.8 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 AID33232.1 - 0.00026 20.5 0.1 0.46 9.9 0.0 2.6 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID33232.1 - 0.00078 19.9 3.4 0.036 14.4 0.1 3.1 1 1 2 3 3 3 1 AAA ATPase domain AAA_29 PF13555.6 AID33232.1 - 0.00091 18.9 0.7 0.0039 16.9 0.1 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID33232.1 - 0.0024 18.4 0.0 0.019 15.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain MukB PF04310.12 AID33232.1 - 0.0037 17.1 0.2 0.14 12.0 0.1 2.4 2 0 0 2 2 2 1 MukB N-terminal AAA_21 PF13304.6 AID33232.1 - 0.006 16.4 0.4 2.8 7.7 0.1 2.9 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 AID33232.1 - 0.0084 16.3 0.2 0.2 11.9 0.0 2.7 3 0 0 3 3 3 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 AID33232.1 - 0.092 12.5 6.3 0.89 9.2 0.4 3.5 3 1 0 3 3 3 0 AAA domain RsgA_GTPase PF03193.16 AID33232.1 - 0.1 12.5 0.1 0.27 11.1 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 AID33232.1 - 0.12 12.5 0.3 0.47 10.5 0.1 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 AID33232.1 - 0.16 11.7 1.2 4.2 7.1 0.1 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein NB-ARC PF00931.22 AID33232.1 - 0.21 10.7 0.2 4 6.6 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_33 PF13671.6 AID33232.1 - 0.73 10.0 4.0 1.4 9.1 0.4 2.7 2 1 0 2 2 2 0 AAA domain Peripla_BP_4 PF13407.6 AID33233.1 - 5.3e-40 137.6 11.0 5.3e-40 137.6 11.0 1.4 2 0 0 2 2 2 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID33233.1 - 0.00025 20.6 0.3 0.00037 20.0 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_6 PF13458.6 AID33233.1 - 0.015 15.0 13.9 0.24 11.0 1.0 2.5 2 1 1 3 3 3 0 Periplasmic binding protein MHYT PF03707.16 AID33233.1 - 0.39 10.9 1.9 56 4.0 0.0 3.2 3 0 0 3 3 3 0 Bacterial signalling protein N terminal repeat Glucodextran_N PF09137.11 AID33234.1 - 1.6e-92 309.8 0.0 2.2e-92 309.3 0.0 1.2 1 0 0 1 1 1 1 Glucodextranase, domain N Glyco_hydro_15 PF00723.21 AID33234.1 - 9.8e-22 77.3 0.0 3.9e-17 62.2 0.0 2.5 2 1 0 2 2 2 2 Glycosyl hydrolases family 15 NAD_binding_2 PF03446.15 AID33235.1 - 2e-32 112.5 0.0 3.2e-32 111.9 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 6PGD PF00393.19 AID33235.1 - 6.6e-21 74.9 0.2 1.1e-09 38.2 0.3 3.3 2 1 0 2 2 2 2 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_11 PF14833.6 AID33235.1 - 0.024 14.9 0.4 0.076 13.3 0.5 1.8 2 0 0 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Pterin_bind PF00809.22 AID33235.1 - 0.15 11.7 0.1 0.29 10.8 0.1 1.4 1 0 0 1 1 1 0 Pterin binding enzyme G6PD_C PF02781.16 AID33236.1 - 9.1e-86 287.6 0.0 1.2e-85 287.2 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 AID33236.1 - 3.4e-51 174.4 0.0 5.7e-51 173.6 0.0 1.4 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain Nrap_D5 PF17406.2 AID33236.1 - 0.045 13.5 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 Nrap protein PAP/OAS1-like domain 5 ROK PF00480.20 AID33237.1 - 9.8e-09 35.1 0.0 5e-07 29.5 0.0 2.1 2 0 0 2 2 2 2 ROK family ROS_MUCR PF05443.11 AID33239.1 - 1.2e-46 157.8 0.0 1.4e-46 157.6 0.0 1.1 1 0 0 1 1 1 1 ROS/MUCR transcriptional regulator protein zf-C2HE PF16278.5 AID33239.1 - 0.19 12.2 0.2 0.34 11.4 0.2 1.3 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Aminotran_1_2 PF00155.21 AID33240.1 - 4.7e-36 124.7 0.0 5.7e-36 124.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 AID33240.1 - 4e-07 29.3 0.0 5.2e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 AID33240.1 - 7.3e-07 28.0 0.0 1e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 AID33240.1 - 0.0097 15.2 0.4 0.014 14.7 0.4 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Alliinase_C PF04864.13 AID33240.1 - 0.019 13.8 0.0 0.029 13.3 0.0 1.3 1 0 0 1 1 1 0 Allinase MFS_3 PF05977.13 AID33241.1 - 1.9e-37 128.9 32.1 2.4e-37 128.5 32.1 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1 PF07690.16 AID33241.1 - 9.1e-33 113.6 64.4 1.3e-31 109.9 42.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TetR_C_34 PF17929.1 AID33241.1 - 0.11 12.6 0.6 0.36 10.9 0.1 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain NIPSNAP PF07978.13 AID33242.1 - 3.6e-28 97.8 0.0 4.5e-28 97.5 0.0 1.0 1 0 0 1 1 1 1 NIPSNAP SAPI PF16560.5 AID33242.1 - 0.076 12.6 0.0 0.084 12.5 0.0 1.0 1 0 0 1 1 1 0 Putative mobile pathogenicity island GATase PF00117.28 AID33243.1 - 2.1e-12 47.2 0.0 2.9e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AID33243.1 - 0.0011 18.8 0.1 0.0043 16.8 0.0 1.8 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 AID33243.1 - 0.031 13.9 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain TerB PF05099.13 AID33244.1 - 4.9e-37 127.1 1.1 6e-37 126.8 1.1 1.0 1 0 0 1 1 1 1 Tellurite resistance protein TerB HemY_N PF07219.13 AID33245.1 - 3.5e-28 97.9 0.4 3.5e-28 97.9 0.4 4.5 5 0 0 5 5 5 2 HemY protein N-terminus TPR_19 PF14559.6 AID33245.1 - 0.004 17.6 22.8 0.01 16.3 1.6 5.0 4 1 1 5 5 5 3 Tetratricopeptide repeat Chromate_transp PF02417.15 AID33245.1 - 0.011 15.9 0.4 0.019 15.1 0.4 1.4 1 0 0 1 1 1 0 Chromate transporter HrpB1_HrpK PF09613.10 AID33245.1 - 0.012 15.3 5.0 0.53 9.9 0.3 3.3 2 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) ANAPC3 PF12895.7 AID33245.1 - 0.016 15.4 3.3 0.99 9.7 0.1 3.3 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 AID33245.1 - 0.069 13.3 10.1 46 4.5 0.0 6.2 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_16 PF13432.6 AID33245.1 - 0.17 12.6 0.1 0.075 13.7 3.1 5.3 4 1 0 5 5 5 0 Tetratricopeptide repeat PDGLE PF13190.6 AID33246.1 - 0.043 13.7 1.9 0.12 12.3 0.0 2.7 3 1 0 3 3 3 0 PDGLE domain Dynamitin PF04912.14 AID33246.1 - 0.077 12.3 0.1 0.14 11.5 0.1 1.4 1 0 0 1 1 1 0 Dynamitin ATG16 PF08614.11 AID33246.1 - 5 7.3 10.1 0.23 11.7 0.2 3.4 3 3 0 3 3 3 0 Autophagy protein 16 (ATG16) HEM4 PF02602.15 AID33247.1 - 1.9e-35 122.3 6.9 2.2e-35 122.1 6.9 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD LytR_C PF13399.6 AID33247.1 - 0.0027 18.6 4.9 2.2 9.3 1.4 3.3 3 1 0 3 3 3 2 LytR cell envelope-related transcriptional attenuator Porphobil_deam PF01379.20 AID33248.1 - 2.5e-75 252.5 0.0 3e-75 252.2 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 AID33248.1 - 2.2e-15 56.8 0.0 1.1e-14 54.5 0.0 2.0 2 0 0 2 2 2 1 Porphobilinogen deaminase, C-terminal domain Peptidase_M22 PF00814.25 AID33249.1 - 2.7e-99 332.3 1.2 3.2e-99 332.0 1.2 1.1 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 AID33249.1 - 0.016 14.9 0.0 0.51 10.0 0.0 2.7 1 1 0 2 2 2 0 Carbamoyltransferase N-terminus T4_tail_cap PF11091.8 AID33249.1 - 0.22 10.4 0.3 13 4.6 0.0 2.2 2 0 0 2 2 2 0 Tail-tube assembly protein NAD_Gly3P_dh_N PF01210.23 AID33250.1 - 1.1e-43 148.9 0.0 1.7e-43 148.3 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 AID33250.1 - 3e-40 137.8 1.3 4.6e-40 137.2 1.3 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F420_oxidored PF03807.17 AID33250.1 - 6.9e-08 33.0 0.1 8.1e-07 29.5 0.1 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 AID33250.1 - 1.6e-06 27.9 0.0 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 AID33250.1 - 7.8e-05 22.9 0.0 0.00015 22.0 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 AID33250.1 - 8.5e-05 22.5 0.0 0.00017 21.5 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding 3HCDH_N PF02737.18 AID33250.1 - 0.0018 18.2 0.1 0.0038 17.1 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AID33250.1 - 0.0032 17.9 0.0 0.012 16.0 0.0 1.8 2 0 0 2 2 2 1 Putative NAD(P)-binding NmrA PF05368.13 AID33250.1 - 0.0048 16.5 0.0 0.0075 15.8 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family OCD_Mu_crystall PF02423.15 AID33250.1 - 0.0086 15.0 0.8 0.0099 14.8 0.0 1.5 2 0 0 2 2 2 1 Ornithine cyclodeaminase/mu-crystallin family Pyr_redox PF00070.27 AID33250.1 - 0.014 15.9 0.6 0.06 13.9 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID33250.1 - 0.019 14.1 0.4 0.028 13.5 0.4 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Glyco_transf_4 PF13439.6 AID33250.1 - 0.029 14.4 0.0 0.055 13.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Pyr_redox_2 PF07992.14 AID33250.1 - 0.031 13.5 0.2 0.079 12.2 0.1 1.8 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 AID33250.1 - 0.041 14.1 0.0 0.12 12.6 0.0 1.9 1 1 0 1 1 1 0 TrkA-N domain YCII PF03795.14 AID33251.1 - 1.2e-23 83.3 0.0 1.4e-23 83.1 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain EVE PF01878.18 AID33252.1 - 1.3e-43 148.5 0.0 1.4e-43 148.3 0.0 1.0 1 0 0 1 1 1 1 EVE domain PrmA PF06325.13 AID33253.1 - 1.6e-09 37.6 0.7 2.2e-09 37.2 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_16 PF10294.9 AID33253.1 - 8.8e-06 25.6 0.0 3.1e-05 23.8 0.0 1.8 1 1 0 1 1 1 1 Lysine methyltransferase Methyltransf_25 PF13649.6 AID33253.1 - 8.8e-05 23.1 0.1 0.00013 22.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 AID33253.1 - 0.00019 21.0 0.1 0.00029 20.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 AID33253.1 - 0.0035 17.0 0.1 0.0056 16.3 0.1 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 AID33253.1 - 0.0036 17.1 0.0 0.006 16.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 AID33253.1 - 0.0088 15.8 0.1 0.013 15.3 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.12 AID33253.1 - 0.094 13.4 0.1 0.15 12.7 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF1761 PF08570.10 AID33254.1 - 2.1e-28 99.1 11.7 2.4e-28 98.9 11.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1761) MpPF26 PF07666.11 AID33254.1 - 0.19 11.8 1.8 0.34 11.0 1.0 1.8 1 1 0 1 1 1 0 M penetrans paralogue family 26 Glyco_transf_25 PF01755.17 AID33255.1 - 3.6e-06 27.0 0.0 9.2e-06 25.7 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) LysR_substrate PF03466.20 AID33256.1 - 1e-29 103.4 1.3 1.2e-29 103.2 0.3 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID33256.1 - 2.3e-20 72.3 1.9 5.2e-20 71.2 1.9 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 AID33256.1 - 0.054 13.4 0.1 0.18 11.7 0.1 1.8 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 AID33256.1 - 0.086 12.6 0.9 0.73 9.7 0.2 2.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain DUF1127 PF06568.11 AID33257.1 - 0.011 15.5 12.6 0.044 13.5 6.5 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1127) YkuD PF03734.14 AID33258.1 - 1.2e-07 32.3 0.0 1.7e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain GATase_2 PF00310.21 AID33258.1 - 0.044 12.5 0.0 0.055 12.2 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Response_reg PF00072.24 AID33259.1 - 9.2e-25 87.0 0.1 2.9e-23 82.2 0.1 2.1 2 0 0 2 2 2 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID33259.1 - 4e-21 74.9 0.3 4e-21 74.9 0.3 2.3 3 0 0 3 3 3 1 Transcriptional regulatory protein, C terminal Ribosomal_S27e PF01667.17 AID33259.1 - 0.24 11.1 0.0 0.42 10.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 cNMP_binding PF00027.29 AID33260.1 - 3.4e-17 62.3 0.0 4.6e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Acetyltransf_1 PF00583.25 AID33261.1 - 2e-08 34.5 0.1 2.8e-08 34.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 AID33261.1 - 0.00022 21.9 0.0 0.0003 21.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID33261.1 - 0.00054 19.9 0.0 0.00071 19.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 AID33261.1 - 0.0015 18.3 0.0 0.003 17.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID33261.1 - 0.018 15.2 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33261.1 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 2 0 0 2 2 2 0 FR47-like protein Exo_endo_phos PF03372.23 AID33262.1 - 8.4e-19 68.0 0.2 1.1e-18 67.7 0.2 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family LolA PF03548.15 AID33263.1 - 3.6e-46 156.9 0.6 4.3e-46 156.6 0.6 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA FtsK_SpoIIIE PF01580.18 AID33264.1 - 1.7e-66 224.1 0.7 2.7e-66 223.4 0.7 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family FtsK_gamma PF09397.10 AID33264.1 - 1.5e-27 95.2 0.0 3.6e-27 93.9 0.0 1.7 1 0 0 1 1 1 1 Ftsk gamma domain FtsK_alpha PF17854.1 AID33264.1 - 7.2e-27 93.5 0.0 1.5e-26 92.5 0.0 1.6 1 0 0 1 1 1 1 FtsK alpha domain FtsK_4TM PF13491.6 AID33264.1 - 1.6e-21 76.8 15.6 1.6e-21 76.8 15.6 1.7 2 0 0 2 2 2 1 4TM region of DNA translocase FtsK/SpoIIIE AAA_10 PF12846.7 AID33264.1 - 2.7e-06 26.5 0.0 0.0036 16.3 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 AID33264.1 - 0.00012 22.3 0.1 0.00021 21.5 0.1 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain T2SSE PF00437.20 AID33264.1 - 0.00065 18.8 0.1 0.0014 17.7 0.1 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein DEAD PF00270.29 AID33264.1 - 0.00087 19.1 0.2 0.0025 17.6 0.2 1.6 1 1 0 1 1 1 1 DEAD/DEAH box helicase TrwB_AAD_bind PF10412.9 AID33264.1 - 0.0028 16.6 0.0 0.04 12.8 0.0 2.4 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain TniB PF05621.11 AID33264.1 - 0.022 14.2 0.5 8 5.8 0.0 3.2 3 0 0 3 3 3 0 Bacterial TniB protein AAA_22 PF13401.6 AID33264.1 - 0.056 13.7 0.2 0.51 10.6 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID33264.1 - 0.15 11.8 0.1 0.37 10.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 AID33264.1 - 0.17 11.4 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF815 PF05673.13 AID33264.1 - 0.2 10.8 0.0 0.34 10.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Ammonium_transp PF00909.21 AID33267.1 - 8.8e-100 334.2 37.9 1.8e-54 185.0 19.4 2.0 2 0 0 2 2 2 2 Ammonium Transporter Family P-II PF00543.22 AID33269.1 - 4.3e-42 142.9 2.3 4.8e-42 142.7 2.3 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF2344 PF10105.9 AID33269.1 - 0.02 14.8 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) 4HBT_3 PF13622.6 AID33270.1 - 9.1e-57 193.2 1.1 1.1e-56 192.9 1.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl_CoA_thio PF02551.15 AID33270.1 - 2.1e-43 147.3 0.0 2.3e-32 111.6 0.0 3.1 2 1 0 2 2 2 2 Acyl-CoA thioesterase FAD_binding_3 PF01494.19 AID33271.1 - 4.3e-31 108.4 0.2 5.4e-31 108.1 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 AID33271.1 - 4.3e-12 46.3 6.3 1.1e-06 28.5 2.0 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID33271.1 - 4e-07 29.5 0.7 0.0055 16.0 0.1 2.1 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.10 AID33271.1 - 1.8e-05 23.9 0.0 0.00016 20.8 0.0 2.0 2 0 0 2 2 2 1 Squalene epoxidase Trp_halogenase PF04820.14 AID33271.1 - 0.00024 20.1 1.9 0.019 13.8 0.1 2.5 1 1 1 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.12 AID33271.1 - 0.0012 18.0 3.2 0.018 14.1 0.7 3.0 3 1 0 3 3 3 1 Lycopene cyclase protein Pyr_redox PF00070.27 AID33271.1 - 0.003 18.1 0.1 3.4 8.3 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID33271.1 - 0.0093 16.0 0.6 2 8.4 0.1 2.5 2 0 0 2 2 2 2 FAD-NAD(P)-binding Thi4 PF01946.17 AID33271.1 - 0.042 13.1 0.5 0.084 12.1 0.1 1.6 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 AID33271.1 - 0.1 11.3 0.9 4.1 6.0 0.0 2.1 2 0 0 2 2 2 0 HI0933-like protein UDPG_MGDP_dh_N PF03721.14 AID33271.1 - 0.18 11.4 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TadE PF07811.12 AID33273.1 - 0.016 15.5 0.4 0.016 15.5 0.4 1.8 2 0 0 2 2 2 0 TadE-like protein DUF3301 PF11743.8 AID33273.1 - 0.061 13.0 1.4 1.1 9.0 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3301) YCII PF03795.14 AID33274.1 - 2e-28 98.7 0.1 2.2e-28 98.5 0.1 1.0 1 0 0 1 1 1 1 YCII-related domain Spt5-NGN PF03439.13 AID33274.1 - 0.089 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section OsmC PF02566.19 AID33277.1 - 2.4e-17 63.2 0.1 3.2e-17 62.8 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein MORN PF02493.20 AID33277.1 - 0.039 13.8 0.1 0.068 13.1 0.1 1.4 1 0 0 1 1 1 0 MORN repeat DUF480 PF04337.12 AID33278.1 - 1.2e-52 178.0 1.1 1.5e-52 177.7 0.5 1.4 2 0 0 2 2 2 1 Protein of unknown function, DUF480 Osmo_CC PF08946.10 AID33278.1 - 0.028 14.6 0.0 3.5 7.9 0.0 2.6 2 0 0 2 2 2 0 Osmosensory transporter coiled coil MarR_2 PF12802.7 AID33278.1 - 0.062 13.2 3.3 0.46 10.4 0.1 2.8 2 1 0 2 2 2 0 MarR family PKcGMP_CC PF16808.5 AID33278.1 - 0.083 12.8 1.0 0.34 10.8 0.2 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase HTH_27 PF13463.6 AID33278.1 - 0.09 13.3 0.2 0.3 11.6 0.1 2.0 1 1 1 2 2 2 0 Winged helix DNA-binding domain DUF1192 PF06698.11 AID33278.1 - 0.11 12.5 0.4 0.11 12.5 0.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) ABC_tran_CTD PF16326.5 AID33278.1 - 0.14 12.4 0.1 0.14 12.4 0.1 2.7 3 0 0 3 3 3 0 ABC transporter C-terminal domain HalX PF08663.10 AID33278.1 - 2.1 8.7 6.3 1.3 9.4 0.2 3.1 3 1 0 3 3 3 0 HalX domain Sulfatase PF00884.23 AID33279.1 - 2.9e-37 128.7 0.0 4e-37 128.3 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Fer2_3 PF13085.6 AID33280.1 - 7.1e-30 103.2 0.0 1.3e-29 102.4 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 AID33280.1 - 1.4e-09 38.4 4.2 1.4e-09 38.4 4.2 2.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID33280.1 - 4.4e-08 33.1 2.6 4.4e-08 33.1 2.6 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID33280.1 - 7.8e-08 32.7 6.3 7.8e-08 32.7 6.3 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID33280.1 - 0.00043 20.8 9.7 0.056 14.0 9.4 3.4 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer2 PF00111.27 AID33280.1 - 0.013 15.4 3.4 0.025 14.5 0.7 2.3 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.6 AID33280.1 - 0.17 12.1 15.3 0.091 12.9 8.2 3.0 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 AID33280.1 - 0.83 10.6 10.0 4 8.4 0.9 3.1 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 AID33280.1 - 1.1 9.4 6.5 1 9.6 0.2 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain DUF3052 PF11253.8 AID33281.1 - 5.4e-06 26.3 0.9 6.9e-06 26.0 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3052) RRN9 PF10680.9 AID33281.1 - 0.044 14.1 0.1 0.075 13.3 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor FAD_binding_2 PF00890.24 AID33282.1 - 4.7e-127 424.5 2.0 5.9e-127 424.2 2.0 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 AID33282.1 - 7.8e-43 145.5 0.6 1.1e-42 145.0 0.6 1.2 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term GIDA PF01134.22 AID33282.1 - 5.1e-07 29.1 0.2 0.021 13.9 2.1 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A Pyr_redox_2 PF07992.14 AID33282.1 - 3.4e-05 23.2 0.5 0.00037 19.8 0.5 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID33282.1 - 0.0005 19.7 0.7 0.053 13.1 0.2 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 AID33282.1 - 0.00076 18.8 0.3 0.018 14.3 0.1 2.8 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 AID33282.1 - 0.0024 17.2 0.7 0.0058 15.9 0.7 1.6 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 AID33282.1 - 0.006 16.0 1.1 0.77 9.0 2.2 2.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 AID33282.1 - 0.21 10.2 1.8 0.34 9.5 0.6 1.9 2 0 0 2 2 2 0 HI0933-like protein Sdh_cyt PF01127.22 AID33283.1 - 1.1e-14 54.5 3.2 1.3e-14 54.3 3.2 1.1 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CybS PF05328.12 AID33283.1 - 2.7e-05 23.8 0.8 5.5e-05 22.9 0.8 1.4 1 1 0 1 1 1 1 CybS, succinate dehydrogenase cytochrome B small subunit Sdh_cyt PF01127.22 AID33284.1 - 6.6e-31 106.9 10.4 7.7e-31 106.6 10.4 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF3007 PF11460.8 AID33284.1 - 2.3 8.5 4.6 0.69 10.2 1.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3007) DUF1691 PF07950.11 AID33284.1 - 4.4 8.1 10.4 11 6.8 8.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1691) DUF3558 PF12079.8 AID33285.1 - 0.82 9.7 10.4 1.3e+02 2.5 10.4 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3558) GGDEF PF00990.21 AID33287.1 - 2.7e-37 128.0 0.0 3.5e-37 127.6 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF PF00990.21 AID33288.1 - 2.1e-36 125.1 0.0 3.2e-36 124.5 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PIG-P PF08510.12 AID33288.1 - 2.9 7.8 5.2 0.37 10.7 0.2 2.0 2 0 0 2 2 2 0 PIG-P DUF4381 PF14316.6 AID33288.1 - 3.9 7.7 6.6 3 8.1 0.5 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Aconitase PF00330.20 AID33289.1 - 1.2e-161 538.8 0.0 1.4e-161 538.6 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Methyltransf_11 PF08241.12 AID33291.1 - 2.5e-13 50.5 0.0 5.1e-13 49.5 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID33291.1 - 5.8e-10 39.7 0.0 1.2e-09 38.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID33291.1 - 1.1e-05 25.3 0.0 1.3e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID33291.1 - 0.00028 20.7 0.0 0.00042 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33291.1 - 0.027 15.2 0.0 0.069 13.9 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Pertactin PF03212.14 AID33291.1 - 0.078 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Pertactin BPD_transp_1 PF00528.22 AID33292.1 - 1.5e-23 83.5 14.5 1.5e-23 83.5 14.5 2.4 1 1 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component Stevor PF17410.2 AID33292.1 - 3.8 7.0 4.1 0.66 9.5 0.1 1.7 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame SBP_bac_3 PF00497.20 AID33293.1 - 3.5e-54 183.6 0.3 4.1e-54 183.4 0.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID33293.1 - 7.4e-10 39.0 0.2 7.8e-09 35.7 0.2 2.2 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Phosphonate-bd PF12974.7 AID33293.1 - 0.0085 15.7 0.0 1.5 8.4 0.0 2.3 2 0 0 2 2 2 2 ABC transporter, phosphonate, periplasmic substrate-binding protein OpuAC PF04069.12 AID33293.1 - 0.04 13.5 0.0 0.58 9.7 0.0 2.2 2 0 0 2 2 2 0 Substrate binding domain of ABC-type glycine betaine transport system MarR PF01047.22 AID33294.1 - 1.3e-14 53.9 0.0 2.5e-14 52.9 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID33294.1 - 2.8e-12 46.3 1.2 4.7e-12 45.6 0.4 1.8 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID33294.1 - 3.1e-09 37.2 0.1 7e-09 36.1 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID33294.1 - 0.0002 21.3 0.2 0.00057 19.9 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AID33294.1 - 0.00055 19.8 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 AID33294.1 - 0.0063 16.6 0.2 0.024 14.8 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain Penicillinase_R PF03965.16 AID33294.1 - 0.024 15.0 0.0 0.04 14.3 0.0 1.6 1 1 0 1 1 1 0 Penicillinase repressor HTH_24 PF13412.6 AID33294.1 - 0.031 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.14 AID33294.1 - 0.043 13.8 0.0 0.071 13.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DprA_WH PF17782.1 AID33294.1 - 0.17 12.1 0.4 0.17 12.1 0.4 2.8 3 2 0 3 3 3 0 DprA winged helix domain OsmC PF02566.19 AID33295.1 - 2.8e-17 63.1 0.0 3.8e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein Ribosomal_L19 PF01245.20 AID33296.1 - 3e-47 159.2 3.0 4e-47 158.7 3.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L19 DUF3500 PF12006.8 AID33296.1 - 0.24 10.8 1.2 4 6.8 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3500) NHase_beta PF02211.15 AID33296.1 - 0.58 10.1 4.7 0.69 9.9 0.1 2.2 2 0 0 2 2 2 0 Nitrile hydratase beta subunit Siah-Interact_N PF09032.11 AID33296.1 - 1.4 9.2 7.6 0.12 12.7 2.3 1.9 2 1 1 3 3 3 0 Siah interacting protein, N terminal TauE PF01925.19 AID33297.1 - 3.3e-39 134.9 43.6 4.1e-39 134.6 43.6 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Na_Pi_cotrans PF02690.15 AID33297.1 - 0.033 14.3 3.5 0.033 14.3 3.5 2.5 2 1 1 3 3 3 0 Na+/Pi-cotransporter Phage_holin_Dp1 PF16938.5 AID33297.1 - 2 8.7 8.3 0.11 12.8 1.5 2.5 3 0 0 3 3 3 0 Putative phage holin Dp-1 tRNA_m1G_MT PF01746.21 AID33298.1 - 1e-53 181.9 0.0 1.2e-53 181.8 0.0 1.0 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase RimM PF01782.18 AID33299.1 - 3e-22 78.6 0.6 4.5e-22 78.1 0.0 1.6 2 0 0 2 2 2 1 RimM N-terminal domain PRC PF05239.16 AID33299.1 - 4.7e-12 45.8 0.2 7.5e-12 45.2 0.2 1.4 1 0 0 1 1 1 1 PRC-barrel domain Phage_integrase PF00589.22 AID33300.1 - 1.5e-31 109.5 0.0 3e-31 108.5 0.0 1.5 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AID33300.1 - 1.6e-17 63.5 0.0 4.8e-17 62.0 0.0 1.7 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 AID33300.1 - 0.0003 21.2 0.0 0.00058 20.3 0.0 1.4 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 AID33300.1 - 0.0095 16.0 0.0 0.021 14.9 0.0 1.5 1 1 0 1 1 1 1 Integrase Phage_int_SAM_2 PF12834.7 AID33300.1 - 0.0096 16.6 0.0 0.047 14.4 0.0 2.1 3 0 0 3 3 3 1 Phage integrase, N-terminal TraB PF01963.17 AID33301.1 - 4.5e-66 223.4 0.1 5.4e-66 223.2 0.1 1.1 1 0 0 1 1 1 1 TraB family Pyr_redox_2 PF07992.14 AID33302.1 - 9.1e-69 231.9 12.0 1.6e-68 231.1 10.8 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID33302.1 - 3.2e-43 146.4 0.2 8e-43 145.2 0.2 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID33302.1 - 3.1e-23 82.1 9.9 6.2e-20 71.5 0.8 3.7 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID33302.1 - 1.6e-12 47.3 7.6 2.3e-08 33.7 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID33302.1 - 5.7e-12 45.4 17.5 7.4e-09 35.2 1.1 4.3 4 1 1 5 5 5 2 FAD binding domain FAD_oxidored PF12831.7 AID33302.1 - 9.9e-10 38.3 12.6 1.5e-08 34.5 0.3 3.2 2 1 1 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33302.1 - 8.7e-09 35.5 3.4 5.9e-06 26.4 0.2 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 AID33302.1 - 6.9e-08 32.0 2.4 0.0014 17.8 0.2 3.1 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 AID33302.1 - 1.5e-07 30.5 12.3 3.4e-06 26.0 0.6 3.8 4 0 0 4 4 4 2 HI0933-like protein GIDA PF01134.22 AID33302.1 - 9.9e-07 28.2 14.8 1.6e-05 24.2 6.9 3.0 2 1 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 AID33302.1 - 2e-06 27.2 14.9 1.9e-05 24.0 0.8 3.4 1 1 1 3 3 3 2 Thi4 family AlaDh_PNT_C PF01262.21 AID33302.1 - 1.9e-05 24.0 5.0 0.006 15.9 0.8 3.1 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 AID33302.1 - 1.9e-05 24.4 18.9 0.0026 17.4 0.3 4.0 4 0 0 4 4 4 3 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID33302.1 - 0.0002 20.8 14.6 0.0053 16.1 0.4 3.6 4 0 0 4 4 4 2 FAD binding domain 3HCDH_N PF02737.18 AID33302.1 - 0.00077 19.4 4.3 0.013 15.4 0.3 2.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 AID33302.1 - 0.015 15.8 0.8 8.6 6.9 0.4 2.8 2 1 0 2 2 2 0 XdhC Rossmann domain UDPG_MGDP_dh_N PF03721.14 AID33302.1 - 0.052 13.1 4.2 2.4 7.7 0.2 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Lycopene_cycl PF05834.12 AID33302.1 - 0.25 10.4 9.6 0.22 10.5 0.5 3.2 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 AID33302.1 - 0.82 10.1 7.8 12 6.4 2.6 3.4 3 2 0 3 3 3 0 Putative NAD(P)-binding adh_short_C2 PF13561.6 AID33303.1 - 1.2e-55 188.7 9.1 1.4e-55 188.4 9.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33303.1 - 4.1e-49 166.7 3.1 5.4e-49 166.3 3.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33303.1 - 1.7e-11 44.3 2.3 2.6e-11 43.8 2.3 1.2 1 0 0 1 1 1 1 KR domain SPOR PF05036.13 AID33303.1 - 0.0047 17.3 0.7 0.01 16.2 0.4 1.8 2 0 0 2 2 2 1 Sporulation related domain Epimerase PF01370.21 AID33303.1 - 0.0067 15.9 0.8 0.013 14.9 0.7 1.7 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family CbiA PF01656.23 AID33303.1 - 0.028 14.5 0.1 0.093 12.8 0.1 1.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain 2-oxoacid_dh PF00198.23 AID33305.1 - 3.9e-82 275.2 0.2 4.6e-82 275.0 0.2 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3_binding PF02817.17 AID33305.1 - 8.9e-09 35.6 0.1 2.2e-08 34.3 0.1 1.7 1 0 0 1 1 1 1 e3 binding domain Transket_pyr PF02779.24 AID33306.1 - 5e-67 225.0 0.0 1.1e-66 223.9 0.0 1.6 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain E1_dh PF00676.20 AID33306.1 - 4.2e-58 196.7 0.0 7.8e-58 195.8 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component OxoGdeHyase_C PF16870.5 AID33306.1 - 8.2e-55 184.7 0.0 2.4e-54 183.1 0.0 1.8 2 0 0 2 2 2 1 2-oxoglutarate dehydrogenase C-terminal 2-oxogl_dehyd_N PF16078.5 AID33306.1 - 1.6e-17 62.8 0.6 3.4e-17 61.8 0.6 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus CoA_binding PF02629.19 AID33307.1 - 1.3e-22 80.3 0.4 1.3e-22 80.3 0.4 2.3 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 AID33307.1 - 5.2e-17 62.1 1.8 8.7e-17 61.3 1.8 1.4 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 AID33307.1 - 1.1e-06 28.5 0.4 1.7e-06 27.9 0.4 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 AID33307.1 - 0.0049 17.4 0.0 0.012 16.1 0.0 1.6 2 0 0 2 2 2 1 CoA binding domain Glyco_trans_1_4 PF13692.6 AID33307.1 - 0.0061 17.0 0.1 0.86 10.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferases group 1 DUF1579 PF07617.11 AID33308.1 - 3.9e-25 88.6 0.1 4.4e-25 88.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1579) Cupin_2 PF07883.11 AID33309.1 - 3.9e-16 58.5 0.2 6e-16 57.9 0.2 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 AID33309.1 - 1.8e-05 24.3 0.0 2.4e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_6 PF12852.7 AID33309.1 - 8.1e-05 22.4 0.1 9.1e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 Cupin Cupin_7 PF12973.7 AID33309.1 - 0.00023 21.0 0.0 0.00031 20.6 0.0 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain AraC_binding PF02311.19 AID33309.1 - 0.0024 17.8 0.1 0.0033 17.3 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 AID33309.1 - 0.0051 16.4 0.0 0.0087 15.7 0.0 1.4 1 1 0 1 1 1 1 Cupin ARD PF03079.14 AID33309.1 - 0.0071 16.5 0.2 0.011 15.9 0.2 1.4 1 1 0 1 1 1 1 ARD/ARD' family MannoseP_isomer PF01050.18 AID33309.1 - 0.02 14.8 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase CENP-C_C PF11699.8 AID33309.1 - 0.051 13.8 0.0 0.085 13.1 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like ATP-grasp_2 PF08442.10 AID33310.1 - 9.7e-67 224.4 0.1 1.6e-66 223.8 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 AID33310.1 - 1.3e-27 96.5 2.3 2.4e-27 95.6 2.3 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 AID33310.1 - 5e-06 26.1 4.4 0.00017 21.1 0.3 2.7 3 0 0 3 3 3 2 ATP-grasp domain FmiP_Thoc5 PF09766.9 AID33310.1 - 0.043 13.1 0.0 0.065 12.5 0.0 1.2 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 Ldh_1_N PF00056.23 AID33311.1 - 6.4e-37 126.8 0.1 1.2e-36 125.9 0.1 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 AID33311.1 - 8.5e-30 103.9 0.0 1.1e-29 103.5 0.0 1.1 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 AID33311.1 - 0.017 14.7 0.0 0.039 13.5 0.0 1.6 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.14 AID33311.1 - 0.042 13.4 2.8 0.26 10.8 0.3 2.7 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Acetyltransf_1 PF00583.25 AID33312.1 - 5.5e-17 62.1 0.0 7e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID33312.1 - 2.4e-09 37.5 0.0 3.5e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID33312.1 - 4.3e-08 33.2 0.0 4.9e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID33312.1 - 2.4e-05 24.4 0.0 3.4e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID33312.1 - 0.00096 19.2 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 AID33312.1 - 0.0067 17.1 0.0 0.0079 16.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33312.1 - 0.012 15.5 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_13 PF13880.6 AID33312.1 - 0.047 13.7 0.0 0.086 12.8 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase AFG1_ATPase PF03969.16 AID33313.1 - 2e-161 536.9 0.3 2.4e-161 536.7 0.3 1.0 1 0 0 1 1 1 1 AFG1-like ATPase Bac_DnaA PF00308.18 AID33313.1 - 0.00016 21.6 0.0 0.52 10.1 0.0 2.5 3 0 0 3 3 3 2 Bacterial dnaA protein AAA_22 PF13401.6 AID33313.1 - 0.032 14.5 0.0 0.07 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID33313.1 - 0.057 13.8 3.2 4.4 7.6 0.0 3.6 3 1 0 4 4 4 0 AAA ATPase domain Inh PF02974.14 AID33314.1 - 1.3e-19 70.1 0.0 2e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Protease inhibitor Inh Lactamase_B_2 PF12706.7 AID33315.1 - 4.1e-39 134.2 0.4 6.7e-39 133.5 0.4 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 AID33315.1 - 3.6e-14 53.0 0.0 4.8e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 AID33315.1 - 2e-06 28.0 0.4 0.00085 19.4 0.2 2.5 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily DUF1328 PF07043.13 AID33317.1 - 2.4e-06 27.6 15.3 2.4e-06 27.6 15.3 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1328) DUF2975 PF11188.8 AID33317.1 - 1.5 8.7 11.8 1.6 8.6 11.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF5325 PF17259.2 AID33317.1 - 2.4 8.1 13.2 3.7 7.5 13.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5325) DAP_epimerase PF01678.19 AID33318.1 - 3.8e-37 127.1 0.1 2.4e-19 69.7 0.0 2.1 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.16 AID33318.1 - 0.039 13.4 0.1 0.12 11.8 0.0 1.8 2 0 0 2 2 2 0 Phenazine biosynthesis-like protein Radical_SAM PF04055.21 AID33319.1 - 6.3e-23 82.0 0.0 2.1e-22 80.3 0.0 1.9 2 1 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 AID33319.1 - 3.1e-18 65.6 0.1 5.8e-18 64.7 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Lipase_GDSL_2 PF13472.6 AID33319.1 - 0.17 12.3 0.4 1.3 9.4 0.1 2.5 2 1 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family SRP54 PF00448.22 AID33321.1 - 7.7e-72 241.1 1.0 1e-71 240.7 1.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 AID33321.1 - 1.9e-07 31.2 0.4 4e-07 30.1 0.4 1.5 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 AID33321.1 - 2.6e-07 30.6 1.5 5e-07 29.6 1.5 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID33321.1 - 1.5e-06 28.6 0.0 9.5e-06 25.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 AID33321.1 - 2.1e-05 23.9 0.0 4.9e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA PF00004.29 AID33321.1 - 6.2e-05 23.4 0.2 0.00031 21.2 0.1 2.4 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID33321.1 - 0.0001 22.8 0.3 0.00026 21.4 0.1 1.8 1 1 1 2 2 2 1 AAA ATPase domain AAA_17 PF13207.6 AID33321.1 - 0.00013 22.4 1.0 0.00021 21.7 0.1 1.8 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.6 AID33321.1 - 0.00039 20.6 0.2 0.0014 18.8 0.1 1.9 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 AID33321.1 - 0.0006 19.1 0.0 0.00088 18.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 AID33321.1 - 0.0015 17.5 1.9 0.017 14.1 1.9 2.1 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 AID33321.1 - 0.002 17.9 0.1 0.0034 17.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.20 AID33321.1 - 0.0028 17.5 0.3 0.0088 16.0 0.1 1.9 2 0 0 2 2 2 1 Adenylylsulphate kinase NTPase_1 PF03266.15 AID33321.1 - 0.0034 17.3 2.0 0.56 10.1 1.0 2.5 2 0 0 2 2 2 1 NTPase CbiA PF01656.23 AID33321.1 - 0.0046 17.0 1.5 0.035 14.1 1.5 2.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF853 PF05872.12 AID33321.1 - 0.0051 15.5 0.2 0.0087 14.7 0.2 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) AAA_28 PF13521.6 AID33321.1 - 0.006 16.8 0.1 0.016 15.4 0.1 1.7 1 0 0 1 1 1 1 AAA domain MobB PF03205.14 AID33321.1 - 0.0073 16.2 1.4 0.09 12.7 0.6 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_7 PF12775.7 AID33321.1 - 0.02 14.4 0.0 0.041 13.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_19 PF13245.6 AID33321.1 - 0.035 14.5 1.3 0.066 13.6 1.2 1.5 1 1 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 AID33321.1 - 0.057 13.1 0.2 0.11 12.2 0.2 1.4 1 0 0 1 1 1 0 Thymidylate kinase AAA_18 PF13238.6 AID33321.1 - 0.075 13.6 0.5 0.26 11.8 0.7 1.9 2 1 0 2 2 1 0 AAA domain Helicase_RecD PF05127.14 AID33321.1 - 0.081 12.8 0.2 0.16 11.8 0.2 1.5 1 0 0 1 1 1 0 Helicase FtsK_SpoIIIE PF01580.18 AID33321.1 - 0.093 12.1 0.3 0.22 10.8 0.1 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family NACHT PF05729.12 AID33321.1 - 0.1 12.5 1.2 0.18 11.7 1.2 1.6 1 1 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 AID33321.1 - 0.11 12.5 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TonB_N PF16031.5 AID33321.1 - 0.12 12.9 24.7 0.19 12.2 24.7 1.3 1 0 0 1 1 1 0 TonB polyproline region AAA_23 PF13476.6 AID33321.1 - 0.18 12.3 0.1 0.33 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33321.1 - 0.18 11.3 4.4 1 8.9 1.6 2.7 1 1 1 2 2 2 0 AAA domain cobW PF02492.19 AID33321.1 - 2.5 7.7 4.8 16 5.0 4.8 2.1 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain IspA PF04279.15 AID33322.1 - 3.6e-58 196.6 12.7 4.2e-58 196.4 12.7 1.0 1 0 0 1 1 1 1 Intracellular septation protein A ALMT PF11744.8 AID33322.1 - 6.2 5.5 8.1 1.4 7.6 1.3 2.0 2 0 0 2 2 2 0 Aluminium activated malate transporter Putative_PNPOx PF01243.20 AID33323.1 - 3.4e-14 52.8 0.0 5.9e-14 52.0 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase SH3_11 PF18103.1 AID33323.1 - 0.083 13.1 0.0 0.43 10.8 0.0 2.1 2 0 0 2 2 2 0 Retroviral integrase C-terminal SH3 domain FMN_red PF03358.15 AID33324.1 - 6.4e-24 84.5 0.0 7.7e-24 84.2 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID33324.1 - 0.00049 19.9 0.0 0.00063 19.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Tautomerase PF01361.21 AID33325.1 - 3.1e-21 75.1 0.4 3.4e-21 74.9 0.4 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_3 PF14832.6 AID33325.1 - 0.0023 18.2 0.0 0.0026 18.0 0.0 1.0 1 0 0 1 1 1 1 Putative oxalocrotonate tautomerase enzyme Tautomerase_2 PF14552.6 AID33325.1 - 0.025 14.6 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Tautomerase enzyme SGL PF08450.12 AID33326.1 - 1.4e-65 221.3 1.0 1.6e-65 221.1 1.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 AID33326.1 - 0.0015 18.6 0.0 1.8 8.7 0.0 2.6 2 1 0 2 2 2 2 Strictosidine synthase DUF5074 PF16819.5 AID33326.1 - 0.0025 17.8 0.0 0.11 12.5 0.0 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF5074) NHL PF01436.21 AID33326.1 - 0.003 17.5 0.1 11 6.2 0.0 4.2 4 0 0 4 4 4 2 NHL repeat HZS_alpha PF18582.1 AID33326.1 - 0.13 12.7 0.1 2.9 8.4 0.0 2.3 1 1 1 2 2 2 0 Hydrazine synthase alpha subunit middle domain DUF1127 PF06568.11 AID33327.1 - 0.028 14.1 0.1 0.044 13.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) Phage_lysis PF03245.13 AID33327.1 - 0.075 13.2 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage Rz lysis protein Redoxin PF08534.10 AID33328.1 - 3.9e-15 55.8 0.0 5.1e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 AID33328.1 - 5e-10 39.4 0.0 6.2e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin PF00085.20 AID33328.1 - 5e-08 32.9 0.0 0.00012 22.1 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_8 PF13905.6 AID33328.1 - 1.8e-07 31.4 0.0 2.5e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 AID33328.1 - 0.014 15.8 0.0 0.023 15.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain TraF PF13728.6 AID33328.1 - 0.13 12.1 0.0 0.17 11.7 0.0 1.3 1 1 0 1 1 1 0 F plasmid transfer operon protein CcmD PF04995.14 AID33329.1 - 7.8e-15 54.7 1.1 1.1e-14 54.2 1.1 1.2 1 0 0 1 1 1 1 Heme exporter protein D (CcmD) PAP_PilO PF06864.12 AID33329.1 - 0.014 14.2 0.1 0.014 14.2 0.1 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CcmB PF03379.13 AID33330.1 - 2e-76 256.3 21.4 2.2e-76 256.1 21.4 1.0 1 0 0 1 1 1 1 CcmB protein DUF2474 PF10617.9 AID33330.1 - 0.0028 17.5 0.4 0.014 15.3 0.4 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2474) ABC_tran PF00005.27 AID33331.1 - 5.3e-24 85.3 0.0 6.7e-24 85.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33331.1 - 2.8e-14 53.6 0.0 5.3e-07 29.7 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33331.1 - 3.9e-08 33.0 0.0 0.02 14.3 0.0 2.9 2 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID33331.1 - 6.4e-06 25.8 0.4 1.7e-05 24.4 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID33331.1 - 2.6e-05 24.7 0.0 3.4e-05 24.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 AID33331.1 - 0.00057 19.0 0.0 0.00085 18.5 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 AID33331.1 - 0.0008 19.7 0.0 0.0016 18.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID33331.1 - 0.0011 19.6 0.1 0.0016 19.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID33331.1 - 0.0046 16.7 0.0 0.0075 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 AID33331.1 - 0.0093 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 AID33331.1 - 0.019 14.9 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 NACHT domain MutS_V PF00488.21 AID33331.1 - 0.034 14.2 0.0 0.059 13.4 0.0 1.3 1 0 0 1 1 1 0 MutS domain V ATPase_2 PF01637.18 AID33331.1 - 0.036 14.0 0.0 0.054 13.4 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_27 PF13514.6 AID33331.1 - 0.036 13.6 0.0 0.062 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID33331.1 - 0.037 13.9 0.0 0.06 13.2 0.0 1.3 1 0 0 1 1 1 0 NTPase cobW PF02492.19 AID33331.1 - 0.049 13.2 0.3 0.081 12.5 0.3 1.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_15 PF13175.6 AID33331.1 - 0.069 12.8 0.0 0.091 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 AID33331.1 - 0.087 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 AID33331.1 - 0.1 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 AID33331.1 - 0.12 12.3 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 AID33331.1 - 0.16 11.9 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 AID33331.1 - 0.21 11.8 0.2 0.35 11.1 0.2 1.3 1 0 0 1 1 1 0 AAA domain Aconitase PF00330.20 AID33332.1 - 3.5e-186 619.7 0.0 4.5e-186 619.3 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 AID33332.1 - 2.2e-41 141.2 0.0 4.2e-41 140.3 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain Ceramidase PF05875.12 AID33333.1 - 1.1e-10 41.4 8.7 2.3e-10 40.4 8.7 1.4 1 1 0 1 1 1 1 Ceramidase YrhK PF14145.6 AID33333.1 - 0.011 15.6 1.4 0.011 15.6 1.4 2.6 2 0 0 2 2 2 0 YrhK-like protein 7TMR-DISM_7TM PF07695.11 AID33333.1 - 0.066 13.1 18.8 0.11 12.4 17.2 1.9 1 1 1 2 2 2 0 7TM diverse intracellular signalling DUF1223 PF06764.11 AID33334.1 - 4.4e-66 222.8 0.0 5.2e-66 222.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1223) Thioredoxin_3 PF13192.6 AID33334.1 - 0.062 13.4 0.0 0.87 9.7 0.0 2.2 1 1 0 1 1 1 0 Thioredoxin domain UbiA PF01040.18 AID33335.1 - 8.2e-07 28.6 1.6 9.9e-07 28.3 1.6 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family MFS_MOT1 PF16983.5 AID33335.1 - 0.029 14.8 1.2 0.062 13.7 1.2 1.6 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily Phage_holin_3_6 PF07332.11 AID33335.1 - 5 7.2 8.5 11 6.1 8.5 1.6 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2794 PF10984.8 AID33336.1 - 6.7e-39 131.9 0.2 7.8e-39 131.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2794) Acetyltransf_4 PF13420.7 AID33338.1 - 5.7e-24 85.0 0.0 6.5e-24 84.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33338.1 - 8.1e-13 48.6 0.0 1e-12 48.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID33338.1 - 1.4e-09 38.2 0.1 2.1e-09 37.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID33338.1 - 2.4e-09 38.0 0.0 2.8e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID33338.1 - 2.8e-07 30.5 0.0 4e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33338.1 - 1.4e-05 25.0 0.0 2.1e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID33338.1 - 0.0027 17.8 0.0 0.005 16.9 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 AID33338.1 - 0.022 14.9 0.7 0.037 14.2 0.7 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Bax1-I PF01027.20 AID33339.1 - 3.7e-63 213.1 34.4 4.4e-63 212.9 34.4 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 PRA1 PF03208.19 AID33339.1 - 0.011 15.3 7.6 0.011 15.3 7.6 2.4 2 1 2 4 4 4 0 PRA1 family protein FtsX PF02687.21 AID33340.1 - 1.5e-08 35.0 24.3 1.6e-05 25.3 7.6 6.7 7 1 0 7 7 7 3 FtsX-like permease family ABC_tran PF00005.27 AID33341.1 - 4e-34 118.1 0.0 5.6e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33341.1 - 1.1e-08 35.2 0.1 0.00026 20.9 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID33341.1 - 6.9e-05 22.5 0.8 0.00014 21.5 0.3 1.8 1 1 1 2 2 2 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID33341.1 - 9.6e-05 21.9 0.1 0.24 10.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID33341.1 - 0.0041 17.0 0.5 0.0067 16.3 0.5 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_33 PF13671.6 AID33341.1 - 0.0099 16.0 0.1 0.017 15.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID33341.1 - 0.025 15.1 0.0 0.037 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID33341.1 - 0.026 14.3 0.5 0.23 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 AID33341.1 - 0.028 14.8 0.8 0.051 14.0 0.8 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 AID33341.1 - 0.042 13.4 0.7 0.13 11.8 0.3 1.8 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 AID33341.1 - 0.077 12.6 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Rad17 PF03215.15 AID33341.1 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain SbcCD_C PF13558.6 AID33341.1 - 0.12 12.6 0.0 2.6 8.3 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 AID33341.1 - 0.19 11.9 0.1 0.32 11.1 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase Lipase_GDSL_2 PF13472.6 AID33342.1 - 1e-23 84.7 0.1 1.3e-23 84.4 0.1 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 AID33342.1 - 3.1e-13 50.2 0.0 3.7e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase OSK PF17182.4 AID33342.1 - 0.006 15.8 0.0 0.0076 15.5 0.0 1.1 1 0 0 1 1 1 1 OSK domain LigT_PEase PF02834.16 AID33343.1 - 1.2e-30 105.5 0.0 3.1e-14 52.9 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 AID33343.1 - 4.5e-16 59.1 0.0 6.2e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily Pterin_4a PF01329.19 AID33344.1 - 6e-32 109.7 0.1 7e-32 109.5 0.1 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase Sun2_CC2 PF18580.1 AID33344.1 - 0.16 12.2 0.0 0.29 11.4 0.0 1.5 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 DUF1232 PF06803.12 AID33345.1 - 7.7e-15 54.4 7.8 1.5e-14 53.5 7.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Copine PF07002.16 AID33345.1 - 0.0035 16.8 0.0 0.0051 16.3 0.0 1.2 1 0 0 1 1 1 1 Copine IalB PF06776.12 AID33346.1 - 5.9e-05 23.1 0.1 0.00035 20.6 0.0 2.3 1 1 0 1 1 1 1 Invasion associated locus B (IalB) protein DUF1176 PF06674.11 AID33346.1 - 0.00082 18.9 0.0 0.00098 18.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) DUF3658 PF12395.8 AID33347.1 - 0.00031 20.6 0.2 0.00035 20.4 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function Voltage_CLC PF00654.20 AID33348.1 - 6e-79 265.9 38.7 6e-79 265.9 38.7 1.9 1 1 1 2 2 2 2 Voltage gated chloride channel NSP10 PF09401.10 AID33349.1 - 0.098 12.7 0.4 0.15 12.1 0.4 1.3 1 0 0 1 1 1 0 RNA synthesis protein NSP10 Radical_SAM PF04055.21 AID33350.1 - 1.7e-17 64.3 0.0 2.5e-16 60.5 0.0 2.6 2 1 0 2 2 2 1 Radical SAM superfamily Sugar_tr PF00083.24 AID33352.1 - 0.15 10.9 9.7 0.042 12.7 5.4 1.8 1 1 1 2 2 2 0 Sugar (and other) transporter UCR_Fe-S_N PF10399.9 AID33352.1 - 1 8.8 6.5 0.11 11.8 0.7 2.4 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF3792 PF12670.7 AID33352.1 - 4 7.6 14.5 22 5.2 14.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3792) LysE PF01810.18 AID33353.1 - 1.2e-28 100.0 11.8 1.3e-28 99.7 11.8 1.0 1 0 0 1 1 1 1 LysE type translocator EAL PF00563.20 AID33355.1 - 1.6e-70 237.4 0.0 2.3e-70 236.8 0.0 1.2 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID33355.1 - 4.8e-40 136.9 0.3 1e-39 135.9 0.3 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain MHYT PF03707.16 AID33355.1 - 1.4e-33 114.9 38.8 6.2e-13 48.7 10.2 4.6 4 0 0 4 4 4 4 Bacterial signalling protein N terminal repeat Glyco_trans_1_4 PF13692.6 AID33355.1 - 0.087 13.3 0.1 0.21 12.0 0.1 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Arginosuc_synth PF00764.19 AID33356.1 - 1e-153 512.2 0.0 1.2e-153 512.0 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.21 AID33356.1 - 0.00057 19.6 0.0 0.00073 19.3 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 AID33356.1 - 0.0038 16.8 0.0 0.0064 16.0 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC SLT_2 PF13406.6 AID33359.1 - 4.2e-52 177.2 0.6 4.9e-50 170.4 0.1 2.0 1 1 1 2 2 2 2 Transglycosylase SLT domain Glucosaminidase PF01832.20 AID33359.1 - 0.00068 20.1 3.7 0.0016 18.9 0.1 2.6 2 2 0 2 2 2 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Peptidase_Mx PF15887.5 AID33361.1 - 2.5e-99 331.5 0.0 2.9e-99 331.2 0.0 1.0 1 0 0 1 1 1 1 Putative zinc-binding metallo-peptidase zinc-ribbon_6 PF10005.9 AID33361.1 - 1.6e-14 54.3 10.1 9.7e-13 48.6 10.1 2.4 1 1 0 1 1 1 1 zinc-ribbon domain Ogr_Delta PF04606.12 AID33361.1 - 0.15 12.1 6.9 2.8 8.0 0.2 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DZR PF12773.7 AID33361.1 - 0.86 9.7 10.6 1.6 8.8 10.6 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 AID33361.1 - 7.8 6.1 9.6 10 5.7 2.8 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF1236 PF06823.12 AID33363.1 - 1.2e-20 73.1 4.7 1.2e-20 73.1 4.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1236) SH3_3 PF08239.11 AID33363.1 - 1.3e-11 44.6 0.6 3.9e-11 43.0 0.1 2.0 2 0 0 2 2 2 1 Bacterial SH3 domain SH3_4 PF06347.13 AID33363.1 - 2.4e-06 27.3 0.2 5.3e-06 26.2 0.2 1.6 1 0 0 1 1 1 1 Bacterial SH3 domain SRP54 PF00448.22 AID33365.1 - 4e-69 232.2 0.8 6.6e-69 231.5 0.8 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 AID33365.1 - 1.2e-27 96.5 7.4 1.2e-27 96.5 7.4 2.9 3 0 0 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.19 AID33365.1 - 3.6e-21 75.2 0.4 3.6e-21 75.2 0.4 2.1 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain CM_2 PF01817.21 AID33365.1 - 7.6e-17 61.4 2.2 2e-16 60.1 0.1 2.9 3 1 0 3 3 3 1 Chorismate mutase type II CbiA PF01656.23 AID33365.1 - 4.2e-06 26.8 0.1 1e-05 25.6 0.1 1.7 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 AID33365.1 - 0.00022 21.2 0.2 0.00046 20.1 0.2 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID33365.1 - 0.0013 18.0 0.1 0.0027 17.0 0.1 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 AID33365.1 - 0.008 16.4 0.1 0.018 15.2 0.1 1.6 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 AID33365.1 - 0.0085 15.5 0.2 0.019 14.3 0.2 1.5 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain ArsA_ATPase PF02374.15 AID33365.1 - 0.012 14.8 2.6 0.12 11.6 0.1 3.0 2 1 1 3 3 3 0 Anion-transporting ATPase ResIII PF04851.15 AID33365.1 - 0.024 14.6 0.1 0.024 14.6 0.1 2.2 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_17 PF13207.6 AID33365.1 - 0.063 13.7 2.8 0.095 13.1 0.1 2.4 2 0 0 2 2 2 0 AAA domain 6PF2K PF01591.18 AID33365.1 - 0.31 10.3 0.7 0.41 9.9 0.0 1.5 2 0 0 2 2 2 0 6-phosphofructo-2-kinase MDMPI_N PF11716.8 AID33365.1 - 3 8.5 10.2 6.7 7.4 0.1 3.2 3 0 0 3 3 3 0 Mycothiol maleylpyruvate isomerase N-terminal domain Ribosomal_S16 PF00886.19 AID33366.1 - 5.4e-26 90.4 0.1 8.7e-26 89.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S16 BAAT_C PF08840.11 AID33368.1 - 6.2e-18 65.5 0.0 8.4e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase PF00756.20 AID33368.1 - 0.071 12.7 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Putative esterase Gly-zipper_Omp PF13488.6 AID33369.1 - 2.7e-08 33.7 23.5 3.8e-08 33.2 23.5 1.3 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 AID33369.1 - 2.2e-07 30.5 26.0 3.4e-07 29.9 26.0 1.3 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_OmpA PF13436.6 AID33369.1 - 6.7e-05 22.6 29.9 0.00011 21.9 29.5 1.6 1 1 0 1 1 1 1 Glycine-zipper domain Rick_17kDa_Anti PF05433.15 AID33369.1 - 0.00035 20.4 31.4 0.00064 19.5 31.1 1.6 1 1 0 1 1 1 1 Glycine zipper 2TM domain Romo1 PF10247.9 AID33369.1 - 0.026 14.9 0.1 0.026 14.9 0.1 2.3 2 1 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 TraT PF05818.12 AID33369.1 - 1.2 8.8 9.9 1.4 8.6 9.9 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DUF3482 PF11981.8 AID33369.1 - 4.7 6.5 10.9 5.3 6.4 10.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Bacteriocin_IIc PF10439.9 AID33369.1 - 9.4 6.4 26.0 46 4.2 26.0 2.1 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Polyketide_cyc2 PF10604.9 AID33370.1 - 1.2e-19 71.0 0.0 1.3e-19 70.8 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 AID33370.1 - 0.01 16.1 0.1 0.014 15.6 0.1 1.6 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DoxX_2 PF13564.6 AID33371.1 - 8e-15 54.8 7.4 1e-14 54.5 7.4 1.1 1 0 0 1 1 1 1 DoxX-like family Bestrophin PF01062.21 AID33372.1 - 1.1e-57 195.7 0.1 1.2e-57 195.6 0.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel PsbN PF02468.15 AID33372.1 - 3.4 7.6 7.1 3 7.8 1.7 3.3 3 1 0 3 3 3 0 Photosystem II reaction centre N protein (psbN) ACT_3 PF10000.9 AID33373.1 - 2.7e-23 81.7 0.0 4.2e-23 81.1 0.0 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 AID33373.1 - 2.1e-10 40.2 0.0 4.2e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 ACT domain Acetyltransf_7 PF13508.7 AID33374.1 - 1.1e-12 48.2 0.0 1.4e-12 47.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 AID33374.1 - 1.4e-11 44.5 0.0 1.6e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33374.1 - 1.5e-11 44.5 0.0 2e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 AID33374.1 - 0.0026 17.7 0.0 0.0054 16.7 0.0 1.5 1 1 0 1 1 1 1 FR47-like protein DUF1391 PF07151.12 AID33374.1 - 0.0036 17.1 0.0 0.006 16.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1391) Semialdhyde_dhC PF02774.18 AID33375.1 - 5.5e-55 186.3 0.0 7.3e-55 185.9 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 AID33375.1 - 1.4e-33 115.9 0.0 2.8e-33 114.9 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 AID33375.1 - 0.00025 20.7 0.1 0.0011 18.6 0.0 1.9 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldh_1_N PF00056.23 AID33375.1 - 0.0084 16.2 0.3 0.026 14.6 0.1 1.9 2 1 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain DapB_N PF01113.20 AID33375.1 - 0.015 15.4 0.0 0.032 14.3 0.0 1.7 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.6 AID33375.1 - 0.042 13.7 0.1 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 NAD(P)H-binding DXP_reductoisom PF02670.16 AID33375.1 - 0.066 13.9 0.2 0.4 11.4 0.0 2.3 2 1 1 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase NmrA PF05368.13 AID33375.1 - 0.11 12.0 0.3 0.24 11.0 0.1 1.6 2 0 0 2 2 2 0 NmrA-like family F420_oxidored PF03807.17 AID33375.1 - 0.12 13.0 0.0 0.28 11.8 0.0 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Epimerase PF01370.21 AID33375.1 - 0.17 11.3 0.0 0.28 10.6 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DEAD PF00270.29 AID33377.1 - 1.4e-40 138.9 0.0 4.1e-40 137.4 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 AID33377.1 - 1.1e-27 96.6 0.0 2.5e-27 95.4 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DbpA PF03880.15 AID33377.1 - 2.2e-14 53.2 0.0 5e-14 52.0 0.0 1.7 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.15 AID33377.1 - 3.4e-05 23.9 0.0 0.00028 20.9 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 AID33377.1 - 0.009 15.4 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Rhabdo_ncap_2 PF03216.13 AID33377.1 - 0.019 14.4 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 Rhabdovirus nucleoprotein WHIM1 PF15612.6 AID33377.1 - 0.023 14.2 0.0 0.061 12.9 0.0 1.7 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 ERCC3_RAD25_C PF16203.5 AID33377.1 - 0.079 12.2 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 AID33377.1 - 0.081 13.2 0.2 1.4 9.2 0.0 2.5 2 0 0 2 2 2 0 AAA domain Glyco_trans_1_4 PF13692.6 AID33378.1 - 2e-12 47.7 0.0 5.3e-12 46.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 AID33378.1 - 8.4e-10 38.4 0.0 1.5e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycogen_syn PF05693.13 AID33378.1 - 7.1e-06 24.9 0.0 9.7e-06 24.4 0.0 1.1 1 0 0 1 1 1 1 Glycogen synthase DUF805 PF05656.14 AID33379.1 - 8.3e-25 87.2 1.7 1.1e-24 86.8 1.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF805) CSD PF00313.22 AID33379.1 - 0.0028 17.5 0.1 0.005 16.7 0.1 1.4 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain Acyl_transf_3 PF01757.22 AID33379.1 - 0.0036 16.4 5.2 0.0063 15.6 5.2 1.4 1 1 0 1 1 1 1 Acyltransferase family DUF805 PF05656.14 AID33380.1 - 7.9e-24 84.1 3.0 1.1e-23 83.6 3.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF805) CSD PF00313.22 AID33380.1 - 0.00058 19.7 0.0 0.00088 19.1 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Polyketide_cyc2 PF10604.9 AID33381.1 - 2.8e-05 24.4 0.1 3.1e-05 24.3 0.1 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport MarR PF01047.22 AID33382.1 - 1.7e-09 37.5 0.0 2.9e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID33382.1 - 7.9e-07 29.5 0.0 1.1e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 AID33382.1 - 3.9e-06 26.7 0.1 6.2e-06 26.0 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 AID33382.1 - 0.058 13.4 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_34 PF13601.6 AID33382.1 - 0.14 12.4 0.0 0.3 11.3 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain PadR PF03551.14 AID33382.1 - 0.19 11.7 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Iso_dh PF00180.20 AID33383.1 - 4.9e-129 430.4 0.0 5.5e-129 430.3 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.12 AID33383.1 - 0.14 11.6 0.0 0.35 10.2 0.0 1.7 2 0 0 2 2 2 0 Pyridoxal phosphate biosynthetic protein PdxA Glyoxalase PF00903.25 AID33384.1 - 2.7e-05 24.3 0.0 3.1e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID33384.1 - 0.0015 18.5 0.0 0.0016 18.3 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID33384.1 - 0.034 14.4 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ribonuc_L-PSP PF01042.21 AID33385.1 - 4.9e-21 75.0 0.0 5.4e-21 74.8 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4392 PF14336.6 AID33386.1 - 0.084 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4392) PepSY_2 PF13670.6 AID33386.1 - 2.5 8.2 7.2 8.8 6.4 7.2 2.1 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain Aconitase_C PF00694.19 AID33387.1 - 3.1e-39 134.3 0.0 4.1e-39 133.9 0.0 1.1 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 AID33387.1 - 0.041 13.5 0.0 1.5 8.5 0.0 2.2 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus Acetyltransf_10 PF13673.7 AID33388.1 - 4.8e-13 49.2 0.0 5.9e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33388.1 - 1.8e-07 31.4 0.0 2.1e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID33388.1 - 2.9e-07 30.8 0.0 4e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID33388.1 - 0.047 13.4 0.0 0.049 13.4 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ HTH_20 PF12840.7 AID33389.1 - 4.5e-16 58.7 1.2 4.5e-16 58.7 1.2 1.7 3 0 0 3 3 2 1 Helix-turn-helix domain MarR_2 PF12802.7 AID33389.1 - 2.4e-10 40.1 0.5 9.4e-10 38.2 0.3 1.9 1 1 1 2 2 2 1 MarR family HTH_5 PF01022.20 AID33389.1 - 3.8e-08 33.1 0.0 6.3e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 AID33389.1 - 3.1e-05 23.8 0.3 0.0001 22.2 0.2 1.9 3 0 0 3 3 3 1 MarR family HTH_11 PF08279.12 AID33389.1 - 6.4e-05 22.8 0.1 0.00029 20.7 0.1 2.0 1 1 1 2 2 2 1 HTH domain HTH_28 PF13518.6 AID33389.1 - 7.3e-05 22.8 1.2 0.19 11.9 0.0 2.4 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_24 PF13412.6 AID33389.1 - 9.1e-05 21.9 0.1 0.0003 20.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 AID33389.1 - 0.0034 17.0 0.3 0.0066 16.1 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_27 PF13463.6 AID33389.1 - 0.0054 17.2 1.1 0.041 14.4 0.2 2.1 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_29 PF13551.6 AID33389.1 - 0.0056 16.7 1.4 1.3 9.1 0.1 2.7 3 0 0 3 3 3 1 Winged helix-turn helix HTH_40 PF14493.6 AID33389.1 - 0.016 15.6 0.1 0.024 15.1 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DprA_WH PF17782.1 AID33389.1 - 0.02 15.0 0.2 0.09 12.9 0.2 1.9 2 0 0 2 2 2 0 DprA winged helix domain RHH_4 PF13467.6 AID33389.1 - 0.03 14.2 0.1 0.055 13.3 0.1 1.6 1 0 0 1 1 1 0 Ribbon-helix-helix domain HTH_9 PF08221.11 AID33389.1 - 0.065 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_41 PF14502.6 AID33389.1 - 0.074 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID33389.1 - 0.094 13.1 0.1 0.47 10.8 0.1 1.9 1 1 1 2 2 2 0 Transcriptional regulator DUF4250 PF14056.6 AID33389.1 - 0.15 12.1 0.1 0.32 11.0 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) AHSA1 PF08327.11 AID33390.1 - 7.2e-22 77.9 0.1 8.2e-22 77.8 0.1 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein RBM1CTR PF08081.11 AID33390.1 - 0.19 11.8 0.1 0.32 11.1 0.1 1.3 1 0 0 1 1 1 0 RBM1CTR (NUC064) family AHSA1 PF08327.11 AID33391.1 - 1.9e-25 89.5 1.2 2.1e-25 89.4 1.2 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein DUF72 PF01904.18 AID33392.1 - 3.7e-50 171.1 0.0 4.1e-50 170.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 DAO PF01266.24 AID33393.1 - 1.9e-06 27.7 0.1 2.3e-06 27.5 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 AID33394.1 - 1.4e-36 126.9 1.0 1.5e-36 126.7 1.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID33394.1 - 5.4e-07 29.1 0.0 0.012 14.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 AID33394.1 - 4.8e-05 22.4 0.1 8.6e-05 21.6 0.1 1.3 1 1 0 1 1 1 1 Tryptophan halogenase FAD_binding_2 PF00890.24 AID33394.1 - 0.00024 20.3 0.1 0.014 14.5 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 AID33394.1 - 0.00043 20.4 0.0 0.0015 18.7 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID33394.1 - 0.002 18.6 0.0 0.2 12.3 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID33394.1 - 0.003 16.7 0.0 0.013 14.6 0.0 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 AID33394.1 - 0.012 15.6 0.1 0.049 13.6 0.0 2.0 2 0 0 2 2 2 0 FAD-NAD(P)-binding TrkA_N PF02254.18 AID33394.1 - 0.031 14.5 0.0 0.065 13.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain YjhX_toxin PF09857.9 AID33394.1 - 0.071 13.1 0.0 4.9 7.2 0.0 2.5 2 0 0 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair Lycopene_cycl PF05834.12 AID33394.1 - 0.08 12.0 0.1 4.8 6.1 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein HATPase_c PF02518.26 AID33395.1 - 6.3e-17 62.1 0.0 4.6e-16 59.3 0.0 2.4 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID33395.1 - 1.2e-14 54.0 0.7 2.4e-14 53.1 0.7 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 AID33395.1 - 3.6e-07 30.5 1.0 8.7e-07 29.2 0.1 2.2 2 0 0 2 2 2 1 HAMP domain HATPase_c_3 PF13589.6 AID33395.1 - 7.1e-06 25.9 0.1 1.3e-05 25.1 0.1 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAP_PilO PF06864.12 AID33395.1 - 0.1 11.4 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Pilin accessory protein (PilO) HATPase_c_2 PF13581.6 AID33395.1 - 0.13 12.2 0.1 0.89 9.5 0.0 2.2 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain Response_reg PF00072.24 AID33396.1 - 3.4e-29 101.3 0.0 4.7e-29 100.8 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID33396.1 - 2e-17 63.0 0.0 3.2e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal GerE PF00196.19 AID33396.1 - 0.012 15.1 0.0 0.029 13.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF4173 PF13777.6 AID33397.1 - 3.8e-51 173.2 6.7 3.8e-51 173.2 6.7 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4173) HpcH_HpaI PF03328.14 AID33399.1 - 8e-41 139.6 0.7 1.1e-40 139.2 0.7 1.2 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 AID33399.1 - 1.9e-13 50.3 0.1 9.4e-09 34.9 0.0 2.3 2 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold PEP-utilizers_C PF02896.18 AID33399.1 - 0.014 14.5 0.0 0.022 13.9 0.0 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain DUF1737 PF08410.10 AID33400.1 - 6.7e-30 102.7 0.0 8e-30 102.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1737) Zincin_1 PF06262.11 AID33401.1 - 6.1e-31 106.4 0.1 8.4e-31 105.9 0.1 1.1 1 0 0 1 1 1 1 Zincin-like metallopeptidase Reprolysin_3 PF13582.6 AID33401.1 - 0.019 15.5 0.0 0.023 15.2 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M54 PF07998.11 AID33401.1 - 0.052 13.5 0.0 0.086 12.8 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M54 Peptidase_M10 PF00413.24 AID33401.1 - 0.093 12.6 0.9 0.17 11.8 0.9 1.3 1 1 0 1 1 1 0 Matrixin DUF4953 PF16313.5 AID33401.1 - 0.097 11.9 0.3 0.16 11.2 0.3 1.2 1 0 0 1 1 1 0 Met-zincin Peptidase_M57 PF12388.8 AID33401.1 - 0.1 12.2 0.2 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Reprolysin_5 PF13688.6 AID33401.1 - 0.23 11.6 0.0 0.27 11.4 0.0 1.1 1 0 0 1 1 1 0 Metallo-peptidase family M12 Reprolysin_4 PF13583.6 AID33401.1 - 0.27 10.9 0.4 0.36 10.4 0.4 1.1 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like RecA PF00154.21 AID33402.1 - 0.072 12.5 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 recA bacterial DNA recombination protein IMS PF00817.20 AID33403.1 - 3.4e-10 40.1 0.0 1.5e-09 38.0 0.0 1.9 2 0 0 2 2 2 1 impB/mucB/samB family Peptidase_M15 PF01427.17 AID33403.1 - 1.2 8.8 4.0 10 5.8 0.1 2.5 3 0 0 3 3 3 0 D-ala-D-ala dipeptidase DNA_pol3_alpha PF07733.12 AID33404.1 - 6.8e-81 271.7 0.0 1e-80 271.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 AID33404.1 - 3.8e-59 198.8 0.0 5.9e-59 198.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain HHH_6 PF14579.6 AID33404.1 - 2.8e-20 72.4 0.1 9.7e-20 70.6 0.1 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 AID33404.1 - 1.4e-07 31.4 0.2 2.7e-07 30.5 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain PHP PF02811.19 AID33404.1 - 1.8e-07 31.6 0.0 3.4e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 PHP domain bact-PGI_C PF10432.9 AID33404.1 - 0.12 12.4 0.1 0.73 9.9 0.0 2.3 3 0 0 3 3 3 0 Bacterial phospho-glucose isomerase C-terminal SIS domain Trm112p PF03966.16 AID33405.1 - 2.4e-10 40.8 0.1 4.8e-10 39.9 0.1 1.5 1 1 0 1 1 1 1 Trm112p-like protein LON_substr_bdg PF02190.16 AID33406.1 - 5.4e-23 82.0 0.0 1.8e-22 80.3 0.0 1.7 1 1 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain TPR_20 PF14561.6 AID33407.1 - 5.1e-29 100.5 10.5 6.4e-29 100.1 3.2 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat Thioredoxin PF00085.20 AID33407.1 - 1.1e-26 92.7 0.0 2e-26 92.0 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin TPR_19 PF14559.6 AID33407.1 - 9.5e-14 51.7 12.8 2.4e-11 44.0 5.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID33407.1 - 2e-08 34.7 22.5 9.3e-08 32.6 6.6 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat Thioredoxin_2 PF13098.6 AID33407.1 - 1.9e-07 31.5 0.0 4e-06 27.2 0.0 2.3 1 1 0 1 1 1 1 Thioredoxin-like domain TPR_9 PF13371.6 AID33407.1 - 1.3e-05 25.2 8.8 0.0067 16.6 2.2 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat Thioredoxin_8 PF13905.6 AID33407.1 - 3.7e-05 24.0 0.0 9e-05 22.7 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_7 PF13899.6 AID33407.1 - 0.00051 20.2 0.0 0.0019 18.4 0.0 1.9 1 0 0 1 1 1 1 Thioredoxin-like TPR_14 PF13428.6 AID33407.1 - 0.00062 20.4 23.5 0.17 12.8 1.0 4.6 1 1 3 4 4 4 3 Tetratricopeptide repeat Redoxin PF08534.10 AID33407.1 - 0.00097 18.9 0.0 0.0019 17.9 0.0 1.5 1 0 0 1 1 1 1 Redoxin TraF PF13728.6 AID33407.1 - 0.0025 17.7 0.0 0.0046 16.8 0.0 1.4 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 AID33407.1 - 0.0054 16.5 0.0 0.0092 15.8 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 AID33407.1 - 0.0066 16.4 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_3 PF13192.6 AID33407.1 - 0.012 15.6 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin domain TPR_17 PF13431.6 AID33407.1 - 0.02 15.3 0.0 12 6.5 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 AID33407.1 - 0.042 13.5 4.5 0.09 12.4 4.5 1.5 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) Ferritin PF00210.24 AID33407.1 - 0.044 13.7 0.4 0.18 11.7 0.1 2.0 1 1 1 2 2 2 0 Ferritin-like domain OST3_OST6 PF04756.13 AID33407.1 - 0.044 13.1 0.0 0.062 12.6 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family TPR_6 PF13174.6 AID33407.1 - 0.062 14.0 6.9 6.2 7.7 0.2 4.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 AID33407.1 - 0.13 12.3 1.0 20 5.5 0.1 3.0 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_21 PF09976.9 AID33407.1 - 0.47 10.1 12.5 0.035 13.8 3.2 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat-like domain Alkyl_sulf_dimr PF14863.6 AID33407.1 - 0.98 9.9 4.8 1.6 9.1 3.2 2.3 2 1 0 2 2 1 0 Alkyl sulfatase dimerisation TPR_12 PF13424.6 AID33407.1 - 3.6 7.9 11.4 0.19 12.1 2.9 3.0 3 2 1 4 4 3 0 Tetratricopeptide repeat tRNA_edit PF04073.15 AID33408.1 - 2.7e-26 92.1 0.1 3.4e-26 91.7 0.1 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Peptidase_M24 PF00557.24 AID33409.1 - 6.2e-28 97.9 0.0 8.4e-28 97.5 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID33409.1 - 1.1e-10 42.3 0.0 1.3e-09 38.8 0.0 2.2 1 1 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Amidase PF01425.21 AID33410.1 - 3e-92 309.9 0.0 3.5e-92 309.7 0.0 1.0 1 0 0 1 1 1 1 Amidase GFO_IDH_MocA PF01408.22 AID33411.1 - 3.1e-28 99.0 0.1 6.5e-28 98.0 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID33411.1 - 0.0062 16.5 0.1 0.012 15.6 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain DapB_N PF01113.20 AID33411.1 - 0.0074 16.4 0.1 0.04 14.0 0.0 2.2 2 1 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 AID33411.1 - 0.0091 16.6 0.0 0.02 15.5 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain CoA_binding PF02629.19 AID33411.1 - 0.011 16.4 0.0 0.026 15.2 0.0 1.5 1 0 0 1 1 1 0 CoA binding domain Shikimate_DH PF01488.20 AID33411.1 - 0.03 14.4 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase KDGP_aldolase PF07071.11 AID33411.1 - 0.099 12.4 0.2 1.5 8.6 0.0 2.5 3 0 0 3 3 3 0 KDGP aldolase NMT1 PF09084.11 AID33412.1 - 4.8e-18 65.9 0.0 6.6e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_3 PF16868.5 AID33412.1 - 0.00031 20.2 0.0 0.00049 19.6 0.0 1.2 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 AID33412.1 - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein BPD_transp_1 PF00528.22 AID33413.1 - 2.2e-20 73.2 24.9 2.2e-20 73.2 24.9 2.1 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component N_methyl PF07963.12 AID33413.1 - 0.028 14.0 0.7 0.028 14.0 0.7 4.3 5 0 0 5 5 5 0 Prokaryotic N-terminal methylation motif Romo1 PF10247.9 AID33413.1 - 0.042 14.2 10.1 2.3 8.6 0.1 2.6 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Gly-zipper_YMGG PF13441.6 AID33413.1 - 9.1 6.1 11.8 0.65 9.8 0.4 2.6 2 0 0 2 2 2 0 YMGG-like Gly-zipper ABC_tran PF00005.27 AID33414.1 - 5.9e-27 94.9 0.0 8.4e-27 94.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33414.1 - 1.2e-06 28.6 0.1 0.021 14.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 AID33414.1 - 0.00042 20.3 0.0 0.00068 19.6 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 AID33414.1 - 0.002 17.6 0.0 1.1 8.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID33414.1 - 0.0029 18.0 0.1 0.0068 16.8 0.1 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 AID33414.1 - 0.0065 16.9 0.2 0.062 13.7 0.2 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_ATPase PF09818.9 AID33414.1 - 0.0092 14.8 0.1 0.29 9.9 0.0 2.2 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_24 PF13479.6 AID33414.1 - 0.012 15.4 0.4 0.34 10.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 AID33414.1 - 0.015 15.1 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 AID33414.1 - 0.017 15.6 0.0 0.023 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID33414.1 - 0.018 15.0 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase NB-ARC PF00931.22 AID33414.1 - 0.021 14.0 0.0 0.078 12.1 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_22 PF13401.6 AID33414.1 - 0.023 15.0 0.2 0.071 13.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID33414.1 - 0.023 14.8 0.2 0.049 13.8 0.2 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID33414.1 - 0.041 13.6 0.1 0.65 9.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein ATPase_2 PF01637.18 AID33414.1 - 0.046 13.6 0.0 0.11 12.3 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea PhoH PF02562.16 AID33414.1 - 0.056 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 AID33414.1 - 0.086 12.4 0.1 0.21 11.1 0.1 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID33414.1 - 0.12 12.3 0.2 0.36 10.7 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_14 PF13173.6 AID33414.1 - 0.16 12.0 0.0 0.34 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 AID33414.1 - 0.17 11.8 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_28 PF13521.6 AID33414.1 - 0.47 10.7 2.4 1.3 9.3 0.6 2.4 3 0 0 3 3 3 0 AAA domain HTH_6 PF01418.17 AID33415.1 - 2.3e-18 65.9 0.0 5.2e-18 64.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 AID33415.1 - 4.8e-17 62.0 0.2 7e-17 61.5 0.2 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 AID33415.1 - 2.9e-08 33.8 0.6 0.00079 19.5 0.1 2.4 1 1 1 2 2 2 2 SIS domain HTH_AsnC-type PF13404.6 AID33415.1 - 0.00094 19.0 0.2 0.0086 15.9 0.1 2.5 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 AID33415.1 - 0.037 13.9 0.2 0.29 11.0 0.0 2.5 2 1 0 2 2 2 0 MarR family HTH_24 PF13412.6 AID33415.1 - 0.04 13.5 0.0 0.091 12.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding LacI PF00356.21 AID33415.1 - 0.046 13.5 0.3 0.15 11.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_23 PF13384.6 AID33415.1 - 0.054 13.3 0.4 0.2 11.5 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_IclR PF09339.10 AID33415.1 - 0.077 12.8 0.2 0.31 10.9 0.0 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain MarR PF01047.22 AID33415.1 - 0.088 12.8 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_38 PF13936.6 AID33415.1 - 0.12 12.1 0.2 0.96 9.3 0.0 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_31 PF13560.6 AID33415.1 - 0.16 12.4 2.5 0.61 10.5 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain DUF3813 PF12758.7 AID33415.1 - 0.3 11.4 1.6 1.5 9.2 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3813) Pyr_redox_3 PF13738.6 AID33417.1 - 1.4e-21 77.0 0.0 2.5e-20 73.0 0.0 2.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 AID33417.1 - 5.8e-17 61.3 0.0 5.6e-13 48.2 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 AID33417.1 - 4.6e-16 58.9 0.0 1.3e-13 50.9 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 AID33417.1 - 3.4e-08 33.0 0.0 5.7e-07 29.0 0.0 2.4 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 AID33417.1 - 3.5e-07 29.8 1.4 0.0024 17.2 0.1 2.9 4 0 0 4 4 4 2 FAD binding domain SnoaL_2 PF12680.7 AID33417.1 - 5.1e-05 23.9 1.6 0.00014 22.5 0.4 2.2 2 0 0 2 2 2 1 SnoaL-like domain IlvN PF07991.12 AID33417.1 - 0.00016 21.3 0.1 0.0004 20.0 0.0 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pyr_redox PF00070.27 AID33417.1 - 0.00032 21.2 0.2 0.34 11.5 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 AID33417.1 - 0.00038 20.7 0.8 2.1 8.6 0.0 3.2 3 0 0 3 3 3 2 TrkA-N domain NAD_binding_7 PF13241.6 AID33417.1 - 0.00044 20.7 0.1 0.12 12.8 0.3 3.6 3 1 0 3 3 3 1 Putative NAD(P)-binding NAD_binding_8 PF13450.6 AID33417.1 - 0.0041 17.3 0.0 0.028 14.7 0.0 2.4 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain SnoaL_3 PF13474.6 AID33417.1 - 0.016 15.5 1.7 0.016 15.5 1.7 2.0 2 0 0 2 2 2 0 SnoaL-like domain HI0933_like PF03486.14 AID33417.1 - 0.017 13.8 0.1 0.13 11.0 0.0 2.2 2 0 0 2 2 2 0 HI0933-like protein 2-Hacid_dh_C PF02826.19 AID33417.1 - 0.034 13.5 0.0 0.34 10.3 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIDA PF01134.22 AID33417.1 - 0.061 12.4 1.7 10 5.1 0.0 3.2 4 0 0 4 4 4 0 Glucose inhibited division protein A ApbA PF02558.16 AID33417.1 - 0.078 12.6 0.0 2.4 7.8 0.0 2.3 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 AID33417.1 - 0.091 11.8 0.7 0.29 10.2 0.3 1.9 2 0 0 2 2 2 0 FAD binding domain F420_oxidored PF03807.17 AID33417.1 - 0.14 12.7 0.7 1.7 9.3 0.1 2.7 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Ribonuc_L-PSP PF01042.21 AID33418.1 - 2.7e-31 108.1 0.0 2.9e-31 108.0 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP SH3_12 PF18129.1 AID33418.1 - 0.032 14.3 0.4 0.044 13.9 0.4 1.3 1 0 0 1 1 1 0 Xrn1 SH3-like domain Amidohydro_1 PF01979.20 AID33419.1 - 9.6e-12 44.9 0.4 2.3e-05 23.9 0.1 2.7 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 AID33419.1 - 1.2e-11 44.8 4.2 9.4e-06 25.3 0.2 2.8 3 0 0 3 3 3 2 Amidohydrolase family DUF4440 PF14534.6 AID33420.1 - 0.0063 16.9 0.8 0.031 14.7 0.8 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) DUF3335 PF11814.8 AID33421.1 - 1e-72 244.0 0.0 1.3e-72 243.6 0.0 1.1 1 0 0 1 1 1 1 Peptidase_C39 like family Guanylate_cyc_2 PF09778.9 AID33421.1 - 0.13 11.6 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Guanylylate cyclase PEMT PF04191.13 AID33422.1 - 7.9e-10 39.1 0.3 7.9e-10 39.1 0.3 2.5 3 1 0 3 3 3 1 Phospholipid methyltransferase ICMT PF04140.14 AID33422.1 - 0.00063 20.1 0.0 0.0014 19.0 0.0 1.6 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF2062 PF09835.9 AID33422.1 - 0.0085 16.0 1.6 0.047 13.5 0.3 2.3 3 0 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2062) RPN2_C PF18004.1 AID33423.1 - 0.04 13.8 0.2 0.046 13.6 0.2 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF347 PF03988.12 AID33424.1 - 4.4e-53 177.3 49.0 3.2e-16 59.2 3.8 4.1 4 0 0 4 4 4 4 Repeat of Unknown Function (DUF347) DUF4538 PF15061.6 AID33424.1 - 1.3 8.8 4.8 0.3 10.9 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF2070 PF09843.9 AID33424.1 - 3.4 5.8 19.4 4.2 5.6 18.6 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) Trans_reg_C PF00486.28 AID33425.1 - 6.7e-25 87.0 0.0 1.1e-24 86.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 AID33425.1 - 1.6e-20 73.4 0.0 2.8e-20 72.6 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 AID33426.1 - 1.8e-19 70.3 0.0 3.6e-19 69.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID33426.1 - 1e-06 28.7 0.9 2.8e-06 27.3 0.4 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AID33426.1 - 2.5e-05 24.3 0.0 0.00012 22.0 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HAMP PF00672.25 AID33426.1 - 0.00019 21.7 2.2 0.00072 19.9 0.4 2.8 3 0 0 3 3 3 1 HAMP domain HATPase_c_5 PF14501.6 AID33426.1 - 0.057 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 GHKL domain Glycos_transf_2 PF00535.26 AID33427.1 - 1.1e-28 100.1 0.0 1.6e-28 99.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 AID33427.1 - 4.6e-17 62.3 11.8 7e-17 61.8 11.8 1.3 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 AID33427.1 - 1.2e-05 25.3 0.0 2.3e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 PMT_2 PF13231.6 AID33428.1 - 1.6e-20 73.9 16.3 1.6e-20 73.9 16.3 2.6 2 1 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 AID33428.1 - 1.2e-06 28.3 13.4 1.2e-06 28.3 13.4 2.2 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase MAP17 PF15807.5 AID33428.1 - 0.61 10.3 2.1 1.3 9.3 2.1 1.4 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Herpes_US9 PF06072.11 AID33428.1 - 2.9 7.8 4.7 2.1 8.3 0.3 2.6 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 AsnC_trans_reg PF01037.21 AID33430.1 - 2.7e-16 59.3 0.0 4.7e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID33430.1 - 2.2e-13 49.5 1.2 3.6e-13 48.8 1.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID33430.1 - 1.9e-12 46.8 4.5 4e-12 45.8 4.5 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 AID33430.1 - 2.2e-08 33.9 0.5 4.9e-08 32.8 0.5 1.6 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 AID33430.1 - 1.5e-07 31.1 1.7 1.5e-07 31.1 1.7 1.7 2 1 0 2 2 1 1 MarR family MarR PF01047.22 AID33430.1 - 3e-07 30.3 0.2 5.7e-07 29.4 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID33430.1 - 1.1e-06 28.6 0.5 2.2e-06 27.6 0.5 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 AID33430.1 - 1.4e-06 28.1 0.1 3.2e-06 27.0 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AID33430.1 - 1.8e-06 27.7 0.1 3.5e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 AID33430.1 - 6.1e-06 26.1 1.9 1.2e-05 25.2 0.3 2.2 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain GntR PF00392.21 AID33430.1 - 1.1e-05 25.0 1.2 0.00082 19.0 0.8 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_23 PF13384.6 AID33430.1 - 1.2e-05 24.9 0.4 2.2e-05 24.1 0.4 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 AID33430.1 - 1.9e-05 24.7 0.7 3.3e-05 23.9 0.3 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain NapD PF03927.13 AID33430.1 - 2.4e-05 24.3 0.0 4.7e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 NapD protein Fe_dep_repress PF01325.19 AID33430.1 - 2.4e-05 24.4 0.0 4.6e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4_2 PF08281.12 AID33430.1 - 5.9e-05 22.7 0.6 0.00051 19.7 0.2 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 AID33430.1 - 0.00013 21.9 0.1 0.00023 21.1 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_30 PF13556.6 AID33430.1 - 0.00025 20.8 0.7 0.00044 20.0 0.7 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_DeoR PF08220.12 AID33430.1 - 0.00039 20.1 0.1 0.00079 19.1 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 AID33430.1 - 0.00046 19.9 1.5 0.00046 19.9 1.5 1.8 3 0 0 3 3 1 1 IclR helix-turn-helix domain HTH_10 PF04967.12 AID33430.1 - 0.00084 19.1 0.2 0.0018 18.0 0.2 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_Tnp_ISL3 PF13542.6 AID33430.1 - 0.00089 18.6 0.5 0.0021 17.4 0.4 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 FtsK_gamma PF09397.10 AID33430.1 - 0.002 17.9 0.5 0.0039 17.0 0.5 1.4 1 0 0 1 1 1 1 Ftsk gamma domain HTH_50 PF18024.1 AID33430.1 - 0.0024 17.5 0.3 0.0044 16.6 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID33430.1 - 0.0027 17.2 2.0 0.0027 17.2 2.0 1.7 2 0 0 2 2 1 1 Sigma-70, region 4 Penicillinase_R PF03965.16 AID33430.1 - 0.0033 17.7 0.0 0.0043 17.4 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_Mga PF08280.11 AID33430.1 - 0.0041 17.1 0.0 0.0071 16.4 0.0 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain LexA_DNA_bind PF01726.16 AID33430.1 - 0.0046 16.7 1.0 0.0094 15.7 0.6 1.8 2 1 0 2 2 1 1 LexA DNA binding domain HTH_38 PF13936.6 AID33430.1 - 0.0055 16.4 1.2 0.0089 15.8 1.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 AID33430.1 - 0.0078 16.7 0.3 0.017 15.6 0.1 1.7 2 0 0 2 2 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 AID33430.1 - 0.0081 15.9 0.0 0.012 15.4 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_5 PF01022.20 AID33430.1 - 0.0081 16.0 0.3 0.021 14.7 0.1 1.7 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family HTH_41 PF14502.6 AID33430.1 - 0.01 15.5 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_39 PF14090.6 AID33430.1 - 0.011 15.4 1.1 0.033 13.9 0.8 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 AID33430.1 - 0.016 15.4 0.1 0.03 14.5 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain FeoC PF09012.10 AID33430.1 - 0.017 15.2 0.0 0.037 14.1 0.0 1.5 2 0 0 2 2 1 0 FeoC like transcriptional regulator Rrf2 PF02082.20 AID33430.1 - 0.017 15.5 0.3 0.045 14.1 0.1 1.7 2 0 0 2 2 1 0 Transcriptional regulator HTH_8 PF02954.19 AID33430.1 - 0.017 14.9 0.4 0.035 13.9 0.4 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_31 PF13560.6 AID33430.1 - 0.017 15.4 9.1 0.11 12.9 7.2 2.8 2 1 0 2 2 2 0 Helix-turn-helix domain HemN_C PF06969.16 AID33430.1 - 0.031 14.4 0.0 0.052 13.6 0.0 1.4 1 0 0 1 1 1 0 HemN C-terminal domain Nuc_N PF14448.6 AID33430.1 - 0.039 13.8 0.0 0.07 13.0 0.0 1.5 1 0 0 1 1 1 0 Nuclease N terminal HTH_3 PF01381.22 AID33430.1 - 0.04 14.0 0.2 0.2 11.7 0.1 2.2 2 0 0 2 2 1 0 Helix-turn-helix HTH_Tnp_4 PF13613.6 AID33430.1 - 0.046 13.5 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Mga PF05043.13 AID33430.1 - 0.06 13.9 0.0 0.087 13.4 0.0 1.2 1 0 0 1 1 1 0 Mga helix-turn-helix domain Sulfolobus_pRN PF05584.11 AID33430.1 - 0.062 13.3 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein GYD PF08734.11 AID33430.1 - 0.062 13.2 0.0 0.14 12.2 0.0 1.6 2 0 0 2 2 1 0 GYD domain HTH_psq PF05225.16 AID33430.1 - 0.072 12.8 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain CENP-B_N PF04218.13 AID33430.1 - 0.076 12.7 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain DprA_WH PF17782.1 AID33430.1 - 0.11 12.7 0.7 0.11 12.7 0.7 2.2 3 0 0 3 3 2 0 DprA winged helix domain SelB-wing_2 PF09106.11 AID33430.1 - 0.12 12.7 0.2 2 8.7 0.0 2.4 3 0 0 3 3 2 0 Elongation factor SelB, winged helix DUF3040 PF11239.8 AID33430.1 - 0.12 12.6 0.3 0.23 11.7 0.1 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF3040) EAP30 PF04157.16 AID33430.1 - 0.13 11.5 0.3 0.22 10.8 0.3 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family FaeA PF04703.12 AID33430.1 - 0.14 12.5 0.1 0.22 11.9 0.1 1.3 1 0 0 1 1 1 0 FaeA-like protein RPA_C PF08784.11 AID33430.1 - 0.16 12.6 0.0 0.26 12.0 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal ApbA PF02558.16 AID33431.1 - 0.0016 18.1 0.0 0.0016 18.1 0.0 1.1 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 AID33431.1 - 0.022 15.0 0.0 0.022 15.0 0.0 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 AID33431.1 - 0.039 14.5 0.1 0.046 14.3 0.1 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 AID33431.1 - 0.05 14.2 0.0 0.051 14.1 0.0 1.1 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 AID33431.1 - 0.061 12.7 0.5 0.083 12.2 0.5 1.1 1 0 0 1 1 1 0 ThiF family Shikimate_DH PF01488.20 AID33431.1 - 0.066 13.3 0.2 0.076 13.1 0.2 1.1 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 AID33431.1 - 0.072 12.4 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID33431.1 - 0.13 12.5 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox_2 PF07992.14 AID33431.1 - 0.19 10.9 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_C PF16653.5 AID33432.1 - 1.6e-20 74.4 0.0 2.1e-20 74.0 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 AID33432.1 - 0.075 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox_2 PF07992.14 AID33433.1 - 4.7e-64 216.4 6.0 6.7e-64 215.9 6.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID33433.1 - 5e-31 107.2 0.1 1.1e-30 106.1 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID33433.1 - 5.6e-19 68.5 5.4 1.3e-17 64.1 0.5 2.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID33433.1 - 2.3e-12 46.8 2.1 7.4e-07 28.7 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID33433.1 - 1.1e-06 28.0 15.7 0.00014 21.1 2.9 3.8 4 0 0 4 4 4 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 AID33433.1 - 6.5e-06 26.3 5.3 0.0046 17.1 0.9 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 AID33433.1 - 0.00026 20.3 7.1 0.089 12.0 0.9 2.2 2 0 0 2 2 2 2 FAD binding domain UDPG_MGDP_dh_N PF03721.14 AID33433.1 - 0.00061 19.4 0.1 0.00061 19.4 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_2 PF00890.24 AID33433.1 - 0.00068 18.8 16.7 0.0011 18.1 2.6 4.0 4 1 1 5 5 5 2 FAD binding domain DAO PF01266.24 AID33433.1 - 0.0013 18.4 18.6 0.59 9.7 1.5 4.2 3 1 1 4 4 4 3 FAD dependent oxidoreductase FAD_oxidored PF12831.7 AID33433.1 - 0.0014 18.0 1.6 0.0014 18.0 1.6 3.1 3 0 0 3 3 3 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 AID33433.1 - 0.003 16.8 0.1 0.17 11.0 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 AID33433.1 - 0.003 16.3 17.6 0.0034 16.1 1.0 4.3 4 1 1 5 5 5 2 HI0933-like protein Myosin_N PF02736.19 AID33433.1 - 0.0036 17.1 0.6 1.4 8.9 0.2 2.9 2 0 0 2 2 2 1 Myosin N-terminal SH3-like domain 3HCDH_N PF02737.18 AID33433.1 - 0.0058 16.5 0.8 0.0058 16.5 0.8 2.2 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID33433.1 - 0.12 12.6 0.1 0.59 10.4 0.1 2.3 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.6 AID33433.1 - 0.2 12.1 2.3 0.2 12.1 0.2 2.1 2 0 0 2 2 2 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 AID33433.1 - 0.73 9.2 5.3 0.68 9.3 0.1 2.8 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 AID33433.1 - 0.76 9.0 12.0 0.11 11.7 1.4 2.9 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 AID33433.1 - 3.1 6.7 8.1 5 6.1 0.3 2.6 3 0 0 3 3 3 0 Lycopene cyclase protein 2-oxoacid_dh PF00198.23 AID33434.1 - 2.2e-73 246.6 0.2 2.7e-73 246.3 0.2 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 AID33434.1 - 6.5e-19 67.5 1.0 1.3e-18 66.5 1.0 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 AID33434.1 - 4.5e-13 49.3 1.1 1.2e-12 47.9 0.5 2.1 2 0 0 2 2 2 1 e3 binding domain GCV_H PF01597.19 AID33434.1 - 0.034 14.0 0.1 0.077 12.9 0.1 1.6 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF2118 PF09891.9 AID33434.1 - 0.059 13.3 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) Biotin_lipoyl_2 PF13533.6 AID33434.1 - 0.41 10.5 4.7 2.2 8.1 0.0 3.2 3 1 1 4 4 4 0 Biotin-lipoyl like Transket_pyr PF02779.24 AID33435.1 - 4.3e-44 150.3 0.0 6.5e-44 149.7 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID33435.1 - 1.6e-36 124.9 0.1 3.3e-36 123.9 0.0 1.6 2 0 0 2 2 2 1 Transketolase, C-terminal domain E1_dh PF00676.20 AID33436.1 - 8.8e-91 304.0 0.0 1e-90 303.7 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component OxoDH_E1alpha_N PF12573.8 AID33436.1 - 3.4e-20 71.5 2.3 6.1e-20 70.7 2.3 1.4 1 0 0 1 1 1 1 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal TPP_enzyme_C PF02775.21 AID33436.1 - 0.0026 17.6 0.3 0.0085 15.9 0.3 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA_pol3_delta PF06144.13 AID33438.1 - 5.7e-10 39.2 0.0 1.7e-09 37.7 0.0 1.7 2 0 0 2 2 2 1 DNA polymerase III, delta subunit DNA_pol3_delt_C PF14840.6 AID33438.1 - 0.083 13.2 0.1 0.21 12.0 0.1 1.7 1 0 0 1 1 1 0 Processivity clamp loader gamma complex DNA pol III C-term DUF1326 PF07040.11 AID33439.1 - 2.5e-58 197.0 0.0 2.8e-58 196.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1326) PTCRA PF15028.6 AID33439.1 - 0.075 12.7 0.2 5.7 6.7 0.1 2.3 1 1 1 2 2 2 0 Pre-T-cell antigen receptor ParBc PF02195.18 AID33440.1 - 3e-27 94.7 0.2 6.4e-27 93.7 0.2 1.6 1 0 0 1 1 1 1 ParB-like nuclease domain HTH_ParB PF17762.1 AID33440.1 - 2.7e-13 49.5 0.1 6.6e-13 48.2 0.1 1.7 1 0 0 1 1 1 1 HTH domain found in ParB protein KorB PF08535.10 AID33440.1 - 0.0044 17.0 0.0 0.013 15.6 0.0 1.8 2 0 0 2 2 2 1 KorB domain HTH_3 PF01381.22 AID33440.1 - 0.039 14.0 0.1 0.2 11.7 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix HTH_Crp_2 PF13545.6 AID33440.1 - 0.046 13.7 0.0 0.2 11.7 0.0 2.2 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain AAA_31 PF13614.6 AID33441.1 - 5e-59 199.2 0.0 7.9e-59 198.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 AID33441.1 - 8.1e-31 106.7 0.0 1.4e-30 106.0 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 AID33441.1 - 3.6e-13 49.4 0.2 1.2e-11 44.4 0.2 2.1 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 AID33441.1 - 1.4e-11 44.4 0.2 1.3e-06 28.0 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 AID33441.1 - 9.1e-10 38.4 2.0 3.2e-09 36.6 2.0 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 AID33441.1 - 9.7e-09 35.0 0.0 2.4e-08 33.7 0.0 1.7 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 AID33441.1 - 1.5e-07 30.9 0.3 2.5e-07 30.2 0.3 1.7 1 1 0 1 1 1 1 Anion-transporting ATPase VirC1 PF07015.11 AID33441.1 - 0.00018 20.9 1.9 0.0025 17.1 0.2 2.6 1 1 2 3 3 3 1 VirC1 protein SRP54 PF00448.22 AID33441.1 - 0.0025 17.5 0.1 0.083 12.5 0.2 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CLP1_P PF16575.5 AID33441.1 - 0.0067 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 AID33441.1 - 0.02 13.9 0.2 0.042 12.8 0.2 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 AID33441.1 - 0.038 13.8 0.0 0.23 11.2 0.1 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein FTHFS PF01268.19 AID33441.1 - 0.04 12.1 0.2 0.08 11.1 0.1 1.4 2 0 0 2 2 2 0 Formate--tetrahydrofolate ligase LpxK PF02606.14 AID33441.1 - 0.041 13.0 0.3 0.064 12.3 0.3 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase DnaB_C PF03796.15 AID33441.1 - 0.089 12.1 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DUF1611 PF07755.11 AID33441.1 - 0.12 11.6 0.1 0.84 8.9 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain GidB PF02527.15 AID33442.1 - 3.4e-36 124.3 0.0 3.8e-36 124.1 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G NAD_binding_8 PF13450.6 AID33442.1 - 0.021 15.0 0.0 0.057 13.7 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 AID33443.1 - 3.4e-162 540.0 0.0 4.9e-162 539.5 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 AID33443.1 - 8.9e-66 222.1 0.9 1.3e-65 221.5 0.9 1.3 1 0 0 1 1 1 1 GidA associated domain FAD_oxidored PF12831.7 AID33443.1 - 2.4e-09 37.1 1.3 2.4e-09 37.1 1.3 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID33443.1 - 6.1e-08 32.2 1.0 2.5e-07 30.2 1.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID33443.1 - 4.1e-05 22.8 3.8 4.1e-05 22.8 3.8 2.5 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.24 AID33443.1 - 5.9e-05 22.8 6.1 0.032 13.8 0.1 2.7 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID33443.1 - 0.00042 20.8 0.7 0.00097 19.6 0.7 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID33443.1 - 0.0013 18.8 0.1 0.0013 18.8 0.1 1.9 2 0 0 2 2 2 1 FAD-NAD(P)-binding HI0933_like PF03486.14 AID33443.1 - 0.0018 17.1 2.6 0.097 11.4 1.2 3.0 3 0 0 3 3 3 1 HI0933-like protein Trp_halogenase PF04820.14 AID33443.1 - 0.0052 15.7 1.8 0.17 10.7 0.5 2.1 2 0 0 2 2 2 1 Tryptophan halogenase AlaDh_PNT_C PF01262.21 AID33443.1 - 0.016 14.5 1.8 0.016 14.5 1.8 1.9 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 AID33443.1 - 0.036 13.1 3.5 0.31 10.0 0.8 2.6 3 0 0 3 3 3 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 AID33443.1 - 0.16 11.2 0.4 0.35 10.1 0.4 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MnmE_helical PF12631.7 AID33444.1 - 2e-46 158.8 0.0 2.4e-46 158.5 0.0 1.1 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 AID33444.1 - 7.7e-34 116.5 0.0 1.3e-33 115.8 0.0 1.4 1 0 0 1 1 1 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 AID33444.1 - 2.2e-20 72.8 0.0 4.2e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 AID33444.1 - 5.3e-06 26.1 0.0 1e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 AID33444.1 - 0.00025 21.2 0.0 0.00042 20.4 0.0 1.4 1 0 0 1 1 1 1 Dynamin family AAA_28 PF13521.6 AID33444.1 - 0.0004 20.7 0.4 0.0021 18.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID33444.1 - 0.17 11.7 0.0 0.39 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 AID33444.1 - 0.2 12.1 0.0 0.57 10.7 0.0 1.7 1 0 0 1 1 1 0 ABC transporter Thioredox_DsbH PF03190.15 AID33445.1 - 9.9e-73 243.5 0.0 1.6e-72 242.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 AID33445.1 - 5.6e-06 26.4 0.0 1.3e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Prenyltrans PF00432.21 AID33445.1 - 0.086 12.6 0.2 0.49 10.2 0.0 2.4 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat Rho_RNA_bind PF07497.12 AID33446.1 - 6.7e-31 106.0 0.0 1.2e-30 105.2 0.0 1.4 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain ATP-synt_ab PF00006.25 AID33446.1 - 5.2e-24 85.1 0.0 7.4e-24 84.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain Rho_N PF07498.12 AID33446.1 - 8.4e-16 57.6 1.4 1.3e-15 57.0 0.5 1.9 2 0 0 2 2 2 1 Rho termination factor, N-terminal domain OB_RNB PF08206.11 AID33446.1 - 0.00018 21.1 0.0 0.002 17.8 0.0 2.2 2 0 0 2 2 2 1 Ribonuclease B OB domain AAA_25 PF13481.6 AID33446.1 - 0.00019 21.0 0.1 0.00051 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 AID33446.1 - 0.0017 18.3 0.0 0.0033 17.4 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 AID33446.1 - 0.018 15.3 0.1 0.045 14.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain DnaB_C PF03796.15 AID33446.1 - 0.053 12.9 0.0 0.089 12.1 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_16 PF13191.6 AID33446.1 - 0.11 12.9 0.0 0.3 11.4 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain UPF0093 PF03653.13 AID33447.1 - 8.7e-57 191.5 5.3 8.7e-57 191.5 5.3 1.3 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0093) CopD PF05425.13 AID33447.1 - 4.6e-06 27.0 3.3 4.6e-06 27.0 3.3 2.4 2 1 0 2 2 2 1 Copper resistance protein D Pox_A14 PF05767.12 AID33447.1 - 0.0028 17.8 1.6 0.042 14.0 0.4 2.3 2 0 0 2 2 2 1 Poxvirus virion envelope protein A14 Serinc PF03348.15 AID33447.1 - 0.0073 15.3 0.4 0.0073 15.3 0.4 1.9 1 1 0 2 2 2 1 Serine incorporator (Serinc) DUF2976 PF11190.8 AID33447.1 - 7.5 6.4 10.2 0.46 10.3 0.2 2.8 2 2 0 2 2 2 0 Protein of unknown function (DUF2976) URO-D PF01208.17 AID33448.1 - 9.1e-113 376.9 0.0 1.1e-112 376.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) FIST PF08495.10 AID33448.1 - 0.084 12.9 0.0 4.6 7.2 0.0 2.1 1 1 0 2 2 2 0 FIST N domain Lipase_GDSL_2 PF13472.6 AID33448.1 - 0.084 13.3 0.1 1.3 9.4 0.1 2.6 2 1 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family Kinase-PPPase PF03618.14 AID33449.1 - 6.5e-88 294.8 0.0 7.4e-88 294.6 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase Maf PF02545.14 AID33450.1 - 1.5e-35 122.5 0.0 1.7e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein Shikimate_dh_N PF08501.11 AID33451.1 - 1.8e-29 101.8 0.0 3e-29 101.1 0.0 1.4 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 AID33451.1 - 1.4e-09 38.2 0.1 2.2e-09 37.5 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 AID33451.1 - 1.2e-08 34.6 0.3 2.4e-08 33.6 0.3 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 AID33451.1 - 0.0011 19.2 0.8 0.0098 16.2 0.8 2.2 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 AID33451.1 - 0.02 15.1 0.4 0.04 14.2 0.4 1.5 1 0 0 1 1 1 0 TrkA-N domain F420_oxidored PF03807.17 AID33451.1 - 0.035 14.7 0.5 0.085 13.4 0.5 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent CoaE PF01121.20 AID33452.1 - 1.3e-37 129.2 0.0 1.7e-37 128.8 0.0 1.0 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_18 PF13238.6 AID33452.1 - 0.0009 19.8 0.0 0.0047 17.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID33452.1 - 0.0081 16.4 0.1 0.012 15.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33452.1 - 0.012 15.8 0.1 0.033 14.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain RNase_T PF00929.24 AID33453.1 - 2.6e-35 122.4 0.0 3.4e-35 122.0 0.0 1.2 1 0 0 1 1 1 1 Exonuclease DNA_pol_A_exo1 PF01612.20 AID33453.1 - 0.00014 21.6 0.0 0.011 15.5 0.0 2.2 2 0 0 2 2 2 2 3'-5' exonuclease RNase_H_2 PF13482.6 AID33453.1 - 0.0022 18.0 0.0 0.0091 16.0 0.0 1.8 1 1 0 1 1 1 1 RNase_H superfamily Abhydrolase_3 PF07859.13 AID33454.1 - 3.6e-59 200.2 0.2 4.6e-59 199.8 0.2 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID33454.1 - 0.00056 19.3 1.7 0.0016 17.8 1.4 1.9 2 1 0 2 2 2 1 Serine aminopeptidase, S33 CW_binding_2 PF04122.12 AID33454.1 - 0.012 16.3 0.3 0.04 14.6 0.3 2.1 1 1 0 1 1 1 0 Putative cell wall binding repeat 2 DUF2974 PF11187.8 AID33454.1 - 0.049 13.2 0.1 0.072 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) COesterase PF00135.28 AID33454.1 - 0.12 11.2 0.3 0.29 9.9 0.0 1.6 2 0 0 2 2 2 0 Carboxylesterase family Abhydrolase_1 PF00561.20 AID33454.1 - 0.24 11.0 1.1 0.77 9.3 0.9 2.0 1 1 2 3 3 3 0 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 AID33454.1 - 0.42 9.4 0.5 1.3 7.8 0.5 1.7 1 1 0 1 1 1 0 Steryl acetyl hydrolase Isochorismatase PF00857.20 AID33455.1 - 2.7e-31 109.1 0.0 3.1e-31 108.9 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family Transketolase_C PF02780.20 AID33455.1 - 0.032 14.1 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 Transketolase, C-terminal domain Peptidase_M24 PF00557.24 AID33456.1 - 2.1e-29 102.7 0.1 2.7e-29 102.3 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 AID33456.1 - 9.9e-12 45.7 0.0 1.7e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain HTH_18 PF12833.7 AID33458.1 - 6.3e-21 74.4 1.7 6.3e-21 74.4 1.7 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 AID33458.1 - 1.8e-11 44.1 0.0 2.6e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 AID33458.1 - 9.7e-06 25.5 0.0 0.0005 20.1 0.0 2.8 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix proteins, AraC family Cys_Met_Meta_PP PF01053.20 AID33459.1 - 3.4e-148 493.3 0.0 3.8e-148 493.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID33459.1 - 0.00055 19.0 0.0 0.00079 18.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 AID33459.1 - 0.0012 18.1 0.0 0.0017 17.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID33459.1 - 0.0027 17.1 0.1 0.0043 16.4 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF2201 PF09967.9 AID33459.1 - 0.12 12.5 0.0 0.37 11.0 0.0 1.7 1 1 0 1 1 1 0 VWA-like domain (DUF2201) THDPS_N_2 PF14805.6 AID33459.1 - 0.16 12.2 0.0 2.4 8.4 0.0 2.4 1 1 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal PALP PF00291.25 AID33460.1 - 1e-64 218.8 0.2 1.3e-64 218.4 0.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 AID33460.1 - 3.9e-18 65.6 1.5 4.5e-10 39.8 0.2 3.3 3 0 0 3 3 3 2 CBS domain Ribonuc_L-PSP PF01042.21 AID33462.1 - 2.8e-15 56.4 0.0 3.4e-15 56.1 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YCII PF03795.14 AID33463.1 - 0.049 14.1 0.0 0.07 13.6 0.0 1.2 1 0 0 1 1 1 0 YCII-related domain Isochorismatase PF00857.20 AID33464.1 - 7.6e-41 140.2 0.2 9e-41 139.9 0.2 1.0 1 0 0 1 1 1 1 Isochorismatase family PBP_like PF12727.7 AID33464.1 - 0.08 12.0 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 PBP superfamily domain HxlR PF01638.17 AID33465.1 - 8.4e-21 73.6 0.0 1.2e-20 73.1 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 AID33465.1 - 0.0033 17.4 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix RP-C PF03428.13 AID33465.1 - 0.015 15.0 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF4364 PF14277.6 AID33465.1 - 0.037 13.8 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF1495 PF07381.11 AID33465.1 - 0.088 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_27 PF13463.6 AID33465.1 - 0.13 12.8 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DJ-1_PfpI PF01965.24 AID33466.1 - 8.5e-13 48.4 0.0 2.7e-10 40.3 0.0 2.8 1 1 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 AID33466.1 - 6e-07 29.3 0.0 0.022 14.5 0.0 2.1 2 0 0 2 2 2 2 ThiJ/PfpI family-like NAD_binding_9 PF13454.6 AID33467.1 - 6.9e-33 113.8 0.2 2.2e-32 112.2 0.0 1.9 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID33467.1 - 1.2e-07 31.9 0.1 2.8e-07 30.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID33467.1 - 5.6e-07 29.5 0.7 1e-06 28.6 0.7 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 AID33467.1 - 1.3e-05 24.5 0.2 0.17 11.0 0.0 2.5 2 1 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 AID33467.1 - 6.6e-05 22.3 0.8 0.00022 20.5 0.1 2.1 2 1 1 3 3 3 1 Thi4 family Pyr_redox_2 PF07992.14 AID33467.1 - 7.8e-05 22.0 0.1 0.0005 19.4 0.1 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID33467.1 - 0.00014 20.8 0.1 0.00046 19.0 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.12 AID33467.1 - 0.00033 19.8 1.8 0.0017 17.5 0.0 2.3 2 1 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 AID33467.1 - 0.00063 19.1 0.0 0.66 9.2 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 AID33467.1 - 0.00071 18.5 0.1 0.0014 17.6 0.1 1.4 1 0 0 1 1 1 1 Tryptophan halogenase Pyr_redox PF00070.27 AID33467.1 - 0.0035 17.9 0.2 0.014 15.9 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID33467.1 - 0.043 12.9 0.1 0.083 11.9 0.1 1.6 1 1 0 1 1 1 0 FAD binding domain FAD_oxidored PF12831.7 AID33467.1 - 0.072 12.4 0.2 0.2 11.0 0.1 1.8 1 1 1 2 2 2 0 FAD dependent oxidoreductase Rrf2 PF02082.20 AID33468.1 - 3.5e-24 84.9 0.0 6e-24 84.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator TrmB PF01978.19 AID33468.1 - 0.012 15.5 0.0 0.02 14.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 AID33468.1 - 0.036 13.9 0.0 0.094 12.6 0.0 1.7 2 0 0 2 2 2 0 MarR family NMT1 PF09084.11 AID33470.1 - 1.6e-25 90.3 0.1 2.5e-25 89.7 0.1 1.3 1 0 0 1 1 1 1 NMT1/THI5 like OpuAC PF04069.12 AID33470.1 - 2.2e-16 60.2 2.3 2.2e-16 60.2 2.3 1.5 2 0 0 2 2 2 1 Substrate binding domain of ABC-type glycine betaine transport system NMT1_2 PF13379.6 AID33470.1 - 5.4e-16 59.1 1.3 9.7e-16 58.2 1.3 1.3 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 AID33470.1 - 3.9e-10 39.8 0.9 6.1e-10 39.1 0.9 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 AID33470.1 - 1e-08 34.9 0.1 0.00039 19.9 0.0 2.8 2 1 1 3 3 3 2 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 AID33470.1 - 0.00021 20.8 0.0 0.00073 19.0 0.0 1.8 2 0 0 2 2 2 1 NMT1-like family ABC_tran PF00005.27 AID33471.1 - 2.5e-28 99.3 0.0 3.2e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33471.1 - 2.2e-05 24.4 0.4 0.12 12.1 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID33471.1 - 0.0006 20.2 0.1 0.0011 19.4 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID33471.1 - 0.002 18.1 0.0 0.0036 17.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 AID33471.1 - 0.0047 16.6 0.0 0.0098 15.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID33471.1 - 0.019 14.7 0.1 0.026 14.2 0.1 1.4 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID33471.1 - 0.022 14.1 0.0 0.041 13.3 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 AID33471.1 - 0.044 13.3 0.4 0.084 12.4 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID33471.1 - 0.053 14.0 0.0 0.32 11.4 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID33471.1 - 0.066 13.5 0.2 0.17 12.1 0.2 1.8 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID33471.1 - 0.09 12.9 0.2 0.19 11.8 0.2 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.12 AID33471.1 - 0.11 12.4 0.4 0.44 10.5 0.0 2.0 2 1 0 2 2 2 0 NACHT domain SMC_N PF02463.19 AID33471.1 - 0.12 11.8 0.0 3.3 7.1 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID33471.1 - 0.2 12.2 0.0 0.3 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID33471.1 - 0.28 10.9 0.0 0.37 10.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain BPD_transp_1 PF00528.22 AID33472.1 - 2.3e-23 82.9 17.4 2.3e-23 82.9 17.4 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component FtsX PF02687.21 AID33472.1 - 0.02 15.4 2.7 0.02 15.4 2.7 3.1 3 1 0 3 3 3 0 FtsX-like permease family US6 PF17616.2 AID33472.1 - 1.9 8.4 3.0 0.76 9.7 0.1 1.8 3 0 0 3 3 3 0 Viral unique short region 6 ABC2_membrane PF01061.24 AID33474.1 - 9.6e-37 126.4 28.8 9.6e-37 126.4 28.8 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 AID33474.1 - 1.3e-06 27.8 34.8 1.3e-06 27.8 34.8 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein MHYT PF03707.16 AID33474.1 - 4.1 7.7 11.5 8.6 6.6 1.8 3.5 2 1 1 3 3 3 0 Bacterial signalling protein N terminal repeat ABC2_membrane_2 PF12679.7 AID33474.1 - 4.9 6.4 24.8 0.15 11.3 18.5 1.6 2 0 0 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 AID33475.1 - 5.7e-32 111.1 0.0 9.2e-32 110.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33475.1 - 6.2e-12 45.9 1.0 8.9e-07 29.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID33475.1 - 9.6e-05 23.0 0.1 0.00016 22.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 AID33475.1 - 0.0001 22.7 0.1 0.001 19.5 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 AID33475.1 - 0.00017 21.1 0.0 0.5 9.8 0.0 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 AID33475.1 - 0.00025 20.9 0.0 0.086 12.5 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain DUF4162 PF13732.6 AID33475.1 - 0.00078 20.1 0.0 0.0033 18.1 0.0 2.1 3 0 0 3 3 1 1 Domain of unknown function (DUF4162) AAA_24 PF13479.6 AID33475.1 - 0.0021 17.8 0.3 1.9 8.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 AID33475.1 - 0.0024 17.6 0.0 0.0053 16.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain KdpD PF02702.17 AID33475.1 - 0.003 17.0 0.0 0.0091 15.5 0.0 1.7 2 0 0 2 2 2 1 Osmosensitive K+ channel His kinase sensor domain AAA_16 PF13191.6 AID33475.1 - 0.0072 16.7 0.0 0.016 15.6 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 AID33475.1 - 0.0079 15.4 0.3 2.2 7.4 0.0 2.1 2 0 0 2 2 2 2 NB-ARC domain RsgA_GTPase PF03193.16 AID33475.1 - 0.0098 15.8 0.1 0.023 14.6 0.1 1.6 1 0 0 1 1 1 1 RsgA GTPase Hydrolase PF00702.26 AID33475.1 - 0.017 15.4 0.0 0.11 12.8 0.0 2.0 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase ATPase PF06745.13 AID33475.1 - 0.02 14.2 1.7 0.4 10.0 0.1 2.2 2 0 0 2 2 2 0 KaiC SbcCD_C PF13558.6 AID33475.1 - 0.036 14.3 0.0 0.087 13.1 0.0 1.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TsaE PF02367.17 AID33475.1 - 0.045 13.8 0.0 0.098 12.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 AID33475.1 - 0.064 13.0 0.3 0.15 11.8 0.1 1.8 1 1 1 2 2 2 0 AAA domain NTPase_1 PF03266.15 AID33475.1 - 0.11 12.4 0.2 0.39 10.6 0.0 1.9 2 0 0 2 2 2 0 NTPase SRP54 PF00448.22 AID33475.1 - 0.16 11.5 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain cobW PF02492.19 AID33475.1 - 0.2 11.3 0.2 0.58 9.7 0.0 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Cyt_bd_oxida_I PF01654.17 AID33476.1 - 3e-149 497.2 26.3 3.4e-149 497.0 26.3 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I NiFe_hyd_3_EhaA PF17367.2 AID33476.1 - 0.34 11.1 4.1 0.37 11.0 0.7 2.8 2 1 1 3 3 3 0 NiFe-hydrogenase-type-3 Eha complex subunit A Cyt_bd_oxida_II PF02322.15 AID33477.1 - 1.3e-80 271.0 36.6 1.5e-80 270.8 36.6 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF4131 PF13567.6 AID33477.1 - 3.1 7.4 28.2 0.064 12.9 5.7 4.1 2 1 2 4 4 4 0 Domain of unknown function (DUF4131) GerE PF00196.19 AID33478.1 - 1.4e-15 56.6 0.1 4.3e-15 55.0 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family AAA_16 PF13191.6 AID33478.1 - 8.3e-15 55.6 2.5 8.3e-15 55.6 2.5 3.8 3 2 0 3 3 2 1 AAA ATPase domain Sigma70_r4_2 PF08281.12 AID33478.1 - 1.6e-05 24.4 0.1 6e-05 22.6 0.1 2.1 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 AID33478.1 - 0.00018 21.2 0.0 0.0016 18.2 0.0 2.7 1 0 0 1 1 1 1 Homeodomain-like domain TPR_12 PF13424.6 AID33478.1 - 0.0037 17.5 3.7 0.0037 17.5 3.7 5.4 5 1 1 6 6 6 3 Tetratricopeptide repeat HTH_38 PF13936.6 AID33478.1 - 0.0094 15.7 0.2 0.057 13.2 0.0 2.5 3 0 0 3 3 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID33478.1 - 0.011 15.2 0.1 0.039 13.5 0.1 2.0 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_29 PF13551.6 AID33478.1 - 0.012 15.6 0.0 0.066 13.2 0.0 2.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_24 PF13412.6 AID33478.1 - 0.014 15.0 0.5 0.056 13.0 0.0 2.4 3 0 0 3 3 1 0 Winged helix-turn-helix DNA-binding ABC_tran PF00005.27 AID33478.1 - 0.016 15.7 0.1 0.051 14.1 0.1 1.8 1 0 0 1 1 1 0 ABC transporter TsaE PF02367.17 AID33478.1 - 0.017 15.1 0.1 0.033 14.2 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RepB PF07506.11 AID33478.1 - 0.021 14.9 0.0 0.084 12.9 0.0 2.1 1 0 0 1 1 1 0 RepB plasmid partitioning protein MeaB PF03308.16 AID33478.1 - 0.027 13.4 0.1 0.06 12.3 0.1 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 AID33478.1 - 0.031 14.2 0.0 0.068 13.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain HTH_10 PF04967.12 AID33478.1 - 0.033 14.0 0.5 0.53 10.1 0.5 2.9 1 1 0 1 1 1 0 HTH DNA binding domain HTH_20 PF12840.7 AID33478.1 - 0.035 14.2 0.7 0.25 11.5 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_5 PF01022.20 AID33478.1 - 0.037 13.9 0.1 0.13 12.1 0.1 1.9 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family AAA_22 PF13401.6 AID33478.1 - 0.042 14.1 0.1 0.3 11.3 0.0 2.5 2 1 0 2 2 1 0 AAA domain ATPase PF06745.13 AID33478.1 - 0.052 12.9 0.0 0.086 12.2 0.0 1.3 1 0 0 1 1 1 0 KaiC AAA_29 PF13555.6 AID33478.1 - 0.082 12.7 0.1 0.27 11.0 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain HTH_28 PF13518.6 AID33478.1 - 0.083 13.0 0.6 0.52 10.5 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain RsgA_GTPase PF03193.16 AID33478.1 - 0.091 12.7 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase TniB PF05621.11 AID33478.1 - 0.093 12.1 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein LexA_DNA_bind PF01726.16 AID33478.1 - 0.13 12.0 1.7 0.36 10.6 0.2 2.5 2 1 0 2 2 2 0 LexA DNA binding domain DUF4242 PF14026.6 AID33479.1 - 8.4e-22 77.1 0.0 9.6e-22 77.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4242) PMSR PF01625.21 AID33482.1 - 4.1e-55 186.2 2.1 5.5e-55 185.7 2.1 1.2 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Tape_meas_lam_C PF09718.10 AID33483.1 - 0.012 15.7 4.5 0.52 10.5 0.7 2.1 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Alanine_zipper PF11839.8 AID33483.1 - 0.037 14.4 15.1 0.056 13.8 10.4 2.1 1 1 1 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein DUF1223 PF06764.11 AID33484.1 - 7.2e-58 196.0 0.0 8.3e-58 195.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1223) Thioredoxin_3 PF13192.6 AID33484.1 - 0.0099 15.9 0.1 1.2 9.2 0.1 2.3 2 0 0 2 2 2 2 Thioredoxin domain DUF836 PF05768.14 AID33484.1 - 0.26 11.7 0.0 0.41 11.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Tad PF13400.6 AID33487.1 - 7.1e-12 45.4 0.9 6.5e-11 42.4 0.1 2.4 2 0 0 2 2 2 1 Putative Flp pilus-assembly TadE/G-like GTP_EFTU PF00009.27 AID33489.1 - 2.4e-52 177.3 0.1 4.4e-52 176.5 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 AID33489.1 - 3.4e-51 171.9 0.9 5.9e-51 171.1 0.9 1.4 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 AID33489.1 - 8.4e-20 70.6 0.0 1.8e-19 69.6 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 AID33489.1 - 2.7e-11 43.7 1.8 5.9e-11 42.6 1.8 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 AID33489.1 - 1.5e-06 28.2 0.1 3.1e-06 27.3 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 AID33489.1 - 0.00012 22.1 0.0 0.00058 19.9 0.0 2.0 1 1 0 1 1 1 1 Elongation Factor G, domain II SRPRB PF09439.10 AID33489.1 - 0.00028 20.4 0.1 0.00097 18.6 0.1 1.9 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 AID33489.1 - 0.00039 20.0 0.0 0.00081 19.0 0.0 1.4 1 0 0 1 1 1 1 Ras family Roc PF08477.13 AID33489.1 - 0.0038 17.4 0.0 0.012 15.8 0.0 1.8 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 AID33489.1 - 0.0062 16.1 0.4 0.037 13.6 0.3 2.3 1 1 0 1 1 1 1 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 AID33489.1 - 0.021 14.8 0.0 0.055 13.5 0.0 1.7 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RF3_C PF16658.5 AID33489.1 - 0.072 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Dynamin_N PF00350.23 AID33489.1 - 0.19 11.8 0.1 2.1 8.4 0.1 2.1 1 1 1 2 2 2 0 Dynamin family MethyltransfD12 PF02086.15 AID33490.1 - 1.8e-14 54.0 0.0 4e-06 26.7 0.0 2.2 2 0 0 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.15 AID33490.1 - 0.0068 16.1 0.0 0.12 12.0 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical protein 95 CTV_P6 PF06706.11 AID33491.1 - 0.041 13.6 0.1 0.041 13.6 0.1 2.2 2 0 0 2 2 2 0 Citrus tristeza virus 6-kDa protein SBP_bac_5 PF00496.22 AID33492.1 - 1.1e-61 209.0 0.4 1.5e-61 208.4 0.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SecB PF02556.14 AID33493.1 - 2.2e-53 179.9 0.0 2.6e-53 179.7 0.0 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB FxsA PF04186.13 AID33494.1 - 5.9e-31 106.8 4.2 7e-31 106.6 4.2 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein Tim44 PF04280.15 AID33495.1 - 1e-50 171.6 0.1 1.3e-50 171.3 0.1 1.1 1 0 0 1 1 1 1 Tim44-like domain DUF4878 PF12870.7 AID33495.1 - 0.031 14.6 0.2 0.052 13.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4878) MltA PF03562.17 AID33496.1 - 3.4e-66 223.2 0.0 4.1e-66 223.0 0.0 1.1 1 0 0 1 1 1 1 MltA specific insert domain 3D PF06725.11 AID33496.1 - 2.2e-25 88.7 0.1 4e-25 87.8 0.1 1.5 1 0 0 1 1 1 1 3D domain Smr PF01713.21 AID33497.1 - 1.1e-24 86.6 0.1 1.8e-24 85.9 0.1 1.3 1 0 0 1 1 1 1 Smr domain HTH_31 PF13560.6 AID33498.1 - 2.1e-14 53.6 5.2 3.7e-14 52.8 3.4 2.1 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 AID33498.1 - 1.7e-13 50.4 0.3 1.4e-11 44.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 AID33498.1 - 4.5e-11 42.6 0.6 8.3e-11 41.8 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_26 PF13443.6 AID33498.1 - 9e-06 26.0 0.0 4.7e-05 23.7 0.0 2.1 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 AID33498.1 - 2.8e-05 23.9 0.2 2.8e-05 23.9 0.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_37 PF13744.6 AID33498.1 - 0.00063 19.6 0.1 0.011 15.7 0.0 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_24 PF13412.6 AID33498.1 - 0.029 13.9 0.0 0.068 12.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding YdaS_antitoxin PF15943.5 AID33498.1 - 0.057 13.3 0.3 0.24 11.3 0.0 2.0 2 1 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Radical_SAM PF04055.21 AID33498.1 - 0.1 12.9 0.1 0.12 12.7 0.0 1.2 1 1 0 1 1 1 0 Radical SAM superfamily Peptidase_C93 PF06035.11 AID33500.1 - 1.5e-67 226.5 0.0 1.7e-67 226.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial transglutaminase-like cysteine proteinase BTLCP FrhB_FdhB_C PF04432.13 AID33500.1 - 0.021 14.6 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus PHB_depo_C PF06850.11 AID33501.1 - 3.7e-106 353.0 0.0 5.1e-106 352.6 0.0 1.2 1 0 0 1 1 1 1 PHB de-polymerase C-terminus DUF1072 PF06380.11 AID33501.1 - 0.16 11.9 0.1 0.31 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) DPBB_1 PF03330.18 AID33502.1 - 1.9e-27 95.3 0.0 2.5e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 Lytic transglycolase Barwin PF00967.17 AID33502.1 - 0.092 12.6 0.3 0.13 12.1 0.3 1.5 1 1 0 1 1 1 0 Barwin family DUF2156 PF09924.9 AID33505.1 - 3.8e-51 173.9 0.2 4.4e-51 173.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) Pyr_redox_3 PF13738.6 AID33507.1 - 2.6e-25 89.3 0.0 1.3e-21 77.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 AID33507.1 - 1.1e-14 53.7 0.0 3.2e-14 52.3 0.0 1.7 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 AID33507.1 - 6.3e-12 45.3 0.0 8e-09 35.1 0.0 2.9 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 AID33507.1 - 1.9e-11 43.8 0.4 9.1e-10 38.2 0.0 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID33507.1 - 4.4e-06 26.1 1.7 0.012 14.9 0.2 2.6 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 AID33507.1 - 3.4e-05 24.0 0.5 0.00015 21.9 0.0 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 AID33507.1 - 4.9e-05 23.4 2.7 0.026 14.5 0.0 3.9 3 1 0 4 4 4 1 FAD-NAD(P)-binding Shikimate_DH PF01488.20 AID33507.1 - 0.0001 22.3 0.0 0.14 12.2 0.0 2.6 3 0 0 3 3 3 2 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.12 AID33507.1 - 0.00021 20.5 0.6 0.019 14.0 0.0 2.7 3 0 0 3 3 3 1 Lycopene cyclase protein HI0933_like PF03486.14 AID33507.1 - 0.00036 19.3 0.9 0.0028 16.4 0.3 2.4 3 0 0 3 3 3 1 HI0933-like protein FAD_binding_2 PF00890.24 AID33507.1 - 0.00051 19.2 0.9 0.00051 19.2 0.9 2.0 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 AID33507.1 - 0.00079 18.6 2.1 0.054 12.6 0.1 3.2 4 0 0 4 4 4 1 Glucose inhibited division protein A DAO PF01266.24 AID33507.1 - 0.00085 19.0 0.1 0.00085 19.0 0.1 2.8 2 1 0 3 3 3 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 AID33507.1 - 0.0037 17.8 0.0 0.62 10.7 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID33507.1 - 0.0051 16.1 0.1 0.072 12.3 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.21 AID33507.1 - 0.011 15.1 0.3 0.78 9.0 0.0 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 AID33507.1 - 0.027 14.9 0.1 14 6.1 0.0 2.7 3 0 0 3 3 3 0 Putative NAD(P)-binding TrkA_N PF02254.18 AID33507.1 - 0.033 14.4 0.5 0.8 10.0 0.0 3.2 4 0 0 4 4 4 0 TrkA-N domain ThiF PF00899.21 AID33507.1 - 0.093 12.1 0.0 5.5 6.3 0.0 2.2 2 0 0 2 2 2 0 ThiF family 3HCDH_N PF02737.18 AID33507.1 - 0.15 12.0 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID33507.1 - 0.16 12.0 0.1 0.39 10.7 0.0 1.6 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF839 PF05787.13 AID33509.1 - 2.7e-204 680.2 2.2 3.2e-204 679.9 2.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF839) TAT_signal PF10518.9 AID33509.1 - 5.7e-05 22.8 2.8 0.00012 21.8 2.8 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence AIDA PF16168.5 AID33509.1 - 0.2 11.8 0.6 2.8 8.1 0.0 2.7 3 0 0 3 3 3 0 Adhesin of bacterial autotransporter system, probable stalk DUF2188 PF09954.9 AID33509.1 - 1.2 9.4 3.6 8.5 6.6 0.1 3.8 4 0 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2188) Response_reg PF00072.24 AID33512.1 - 2.9e-19 69.3 0.0 7e-19 68.1 0.0 1.6 2 0 0 2 2 2 1 Response regulator receiver domain GerE PF00196.19 AID33512.1 - 1.6e-18 66.0 2.4 3.3e-18 65.0 2.2 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID33512.1 - 8e-08 31.8 0.2 1.4e-07 31.1 0.2 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_20 PF12840.7 AID33512.1 - 0.0029 17.7 1.6 1.6 8.8 0.1 2.9 2 1 1 3 3 3 2 Helix-turn-helix domain Sigma70_ECF PF07638.11 AID33512.1 - 0.0058 16.5 0.1 0.0083 16.0 0.1 1.3 1 0 0 1 1 1 1 ECF sigma factor Sigma70_r4 PF04545.16 AID33512.1 - 0.0066 15.9 4.0 0.0079 15.7 2.6 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.6 AID33512.1 - 0.018 14.8 0.1 0.049 13.4 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2895 PF11444.8 AID33512.1 - 0.02 14.3 0.1 0.03 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) HTH_40 PF14493.6 AID33512.1 - 0.036 14.5 0.1 0.072 13.5 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 AID33512.1 - 0.062 12.9 0.1 0.25 10.9 0.1 2.0 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID33512.1 - 0.069 13.2 0.0 0.28 11.2 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn helix HTH_23 PF13384.6 AID33512.1 - 0.13 12.1 0.8 0.52 10.2 0.1 2.2 2 0 0 2 2 2 0 Homeodomain-like domain Sugar_transport PF06800.12 AID33513.1 - 0.0019 17.6 7.8 0.0022 17.4 7.8 1.1 1 0 0 1 1 1 1 Sugar transport protein EamA PF00892.20 AID33513.1 - 0.0044 17.2 15.4 0.005 17.0 15.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 AID33513.1 - 0.036 14.7 4.0 0.056 14.1 4.0 1.4 1 1 0 1 1 1 0 Small Multidrug Resistance protein TPT PF03151.16 AID33513.1 - 0.044 13.1 4.7 0.048 13.0 4.7 1.2 1 1 0 1 1 1 0 Triose-phosphate Transporter family HATPase_c_2 PF13581.6 AID33514.1 - 8e-06 25.8 0.0 2.1e-05 24.5 0.0 1.8 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HisKA_3 PF07730.13 AID33514.1 - 1.5e-05 25.4 1.2 0.00014 22.3 0.0 2.8 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 AID33514.1 - 0.0034 17.9 0.0 0.013 16.0 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAP2 PF01569.21 AID33515.1 - 9.5e-23 80.5 7.8 9.5e-23 80.5 7.8 1.9 3 0 0 3 3 3 1 PAP2 superfamily PAP2_3 PF14378.6 AID33515.1 - 1e-05 25.4 11.5 1e-05 25.4 11.5 2.0 1 1 1 2 2 2 1 PAP2 superfamily HTH_31 PF13560.6 AID33516.1 - 3.8e-07 30.3 0.6 3.8e-07 30.3 0.6 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 AID33516.1 - 1.3e-06 28.3 0.1 2.7e-06 27.3 0.1 1.7 1 1 0 1 1 1 1 Helix-turn-helix HTH_25 PF13413.6 AID33516.1 - 0.006 16.4 0.3 0.016 15.0 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 AID33516.1 - 0.048 13.6 0.0 7.3 6.6 0.0 2.2 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 AID33516.1 - 0.06 12.9 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 AID33516.1 - 0.063 13.7 0.0 0.087 13.3 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF3853 PF12964.7 AID33516.1 - 0.087 13.0 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) HTH_23 PF13384.6 AID33516.1 - 0.095 12.5 0.2 0.23 11.3 0.1 1.6 2 0 0 2 2 2 0 Homeodomain-like domain HTH_37 PF13744.6 AID33516.1 - 0.12 12.4 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Sulfate_transp PF00916.20 AID33517.1 - 5.1e-79 265.8 27.9 6.3e-79 265.5 27.9 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 AID33517.1 - 1.9e-14 53.3 0.0 3e-14 52.7 0.0 1.3 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 AID33517.1 - 2.4e-06 27.8 0.0 6.5e-06 26.4 0.0 1.8 1 0 0 1 1 1 1 STAS domain HAD_2 PF13419.6 AID33518.1 - 9.5e-09 35.6 0.0 1.1e-08 35.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID33518.1 - 0.00042 20.7 0.0 0.024 14.9 0.0 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase EamA PF00892.20 AID33519.1 - 2e-30 105.7 39.1 1.5e-15 57.6 14.7 2.0 2 0 0 2 2 2 2 EamA-like transporter family NEMP PF10225.9 AID33519.1 - 0.022 14.4 1.2 0.022 14.4 1.2 2.2 2 0 0 2 2 2 0 NEMP family LysR_substrate PF03466.20 AID33520.1 - 8.1e-29 100.5 0.2 1.1e-28 100.1 0.2 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID33520.1 - 6.3e-16 58.1 0.2 1.3e-15 57.1 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_8 PF02954.19 AID33520.1 - 0.0013 18.5 0.1 0.0068 16.2 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family HTH_AsnC-type PF13404.6 AID33520.1 - 0.011 15.6 0.2 0.16 11.8 0.1 2.9 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID33520.1 - 0.014 15.0 0.1 0.053 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 AID33520.1 - 0.016 15.0 0.4 0.042 13.7 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID33520.1 - 0.017 15.0 0.2 0.049 13.5 0.2 1.8 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 AID33520.1 - 0.024 14.8 0.0 0.086 13.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_50 PF18024.1 AID33520.1 - 0.024 14.2 0.1 0.061 12.9 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain P22_Cro PF14549.6 AID33520.1 - 0.027 14.3 0.1 0.08 12.8 0.1 1.7 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro HTH_30 PF13556.6 AID33520.1 - 0.04 13.7 0.1 0.089 12.6 0.1 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Pur_DNA_glyco PF02245.16 AID33521.1 - 2e-53 180.4 0.0 2.2e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) SnoaL_2 PF12680.7 AID33522.1 - 6.1e-08 33.2 0.7 8.1e-08 32.8 0.7 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_4 PF13577.6 AID33522.1 - 0.0039 17.3 0.2 0.0053 16.9 0.2 1.4 1 1 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 AID33522.1 - 0.0079 16.6 0.2 0.012 16.0 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) NTF2 PF02136.20 AID33522.1 - 0.19 12.3 0.0 0.26 11.9 0.0 1.3 1 1 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain SGL PF08450.12 AID33523.1 - 0.00012 21.7 0.2 0.0011 18.6 0.0 2.3 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 AID33523.1 - 0.00032 20.6 0.3 1.5 9.0 0.0 4.2 4 0 0 4 4 4 1 NHL repeat PQQ_3 PF13570.6 AID33523.1 - 0.0013 19.1 11.2 0.28 11.7 0.1 5.0 5 0 0 5 5 5 1 PQQ-like domain Arylesterase PF01731.20 AID33523.1 - 0.08 13.2 0.2 16 5.8 0.0 3.2 4 0 0 4 4 4 0 Arylesterase HTH_26 PF13443.6 AID33524.1 - 1.8e-09 37.9 0.0 3.6e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 AID33524.1 - 7.3e-08 32.3 0.4 1.7e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 AID33524.1 - 3.5e-06 27.0 0.0 7e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 AID33524.1 - 1.8e-05 24.4 0.0 0.00011 21.9 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_24 PF13412.6 AID33524.1 - 2.4e-05 23.8 0.0 0.002 17.7 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID33524.1 - 0.00013 21.9 0.0 0.052 13.6 0.0 2.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 AID33524.1 - 0.00021 20.6 0.0 0.00052 19.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.7 AID33524.1 - 0.00033 20.5 0.3 0.86 9.5 0.0 3.0 3 1 0 3 3 2 2 MarR family HTH_31 PF13560.6 AID33524.1 - 0.00039 20.7 1.3 0.00049 20.4 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 AID33524.1 - 0.00047 19.8 0.0 0.0011 18.6 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_IclR PF09339.10 AID33524.1 - 0.00063 19.5 0.0 1.1 9.1 0.0 2.8 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_28 PF13518.6 AID33524.1 - 0.00065 19.8 0.0 0.0015 18.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 AID33524.1 - 0.00072 19.0 0.1 0.0017 17.8 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 AID33524.1 - 0.0015 18.5 0.1 0.12 12.4 0.0 2.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_Tnp_4 PF13613.6 AID33524.1 - 0.0016 18.1 0.0 0.0031 17.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_AsnC-type PF13404.6 AID33524.1 - 0.0033 17.2 0.5 0.018 14.9 0.0 2.1 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 AID33524.1 - 0.0042 16.9 0.0 2.2 8.3 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Mga PF05043.13 AID33524.1 - 0.0085 16.7 0.0 0.044 14.4 0.0 1.9 2 0 0 2 2 2 1 Mga helix-turn-helix domain HTH_38 PF13936.6 AID33524.1 - 0.0099 15.6 0.0 0.024 14.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_CI_repr PF07022.13 AID33524.1 - 0.013 15.6 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_36 PF13730.6 AID33524.1 - 0.016 15.2 0.0 0.46 10.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 AID33524.1 - 0.016 15.2 0.2 0.049 13.6 0.0 1.9 2 0 0 2 2 1 0 HTH domain HTH_20 PF12840.7 AID33524.1 - 0.022 14.8 0.4 2.7 8.1 0.0 3.0 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_7 PF02796.15 AID33524.1 - 0.023 14.8 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_10 PF04967.12 AID33524.1 - 0.023 14.5 0.0 0.052 13.3 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Rrf2 PF02082.20 AID33524.1 - 0.023 15.0 0.0 1.9 8.9 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_5 PF01022.20 AID33524.1 - 0.12 12.2 0.0 20 5.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family MarR PF01047.22 AID33524.1 - 0.12 12.3 0.0 2.5 8.1 0.0 2.4 2 0 0 2 2 2 0 MarR family HTH_35 PF13693.6 AID33524.1 - 0.15 12.1 0.0 0.32 11.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TetR_N PF00440.23 AID33524.1 - 0.16 11.8 0.1 0.93 9.3 0.0 2.3 3 0 0 3 3 2 0 Bacterial regulatory proteins, tetR family YdaS_antitoxin PF15943.5 AID33524.1 - 0.18 11.7 0.0 0.38 10.7 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Peptidase_C92 PF05708.12 AID33525.1 - 5.9e-09 36.2 0.0 8.6e-08 32.5 0.0 2.0 2 0 0 2 2 2 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CHAD PF05235.14 AID33526.1 - 1.1e-22 81.2 15.4 1.1e-22 81.2 15.4 1.6 2 0 0 2 2 2 1 CHAD domain Syntaxin PF00804.25 AID33526.1 - 0.018 14.7 0.1 0.06 13.0 0.0 1.9 2 1 1 3 3 3 0 Syntaxin DUF4398 PF14346.6 AID33526.1 - 0.26 12.0 13.4 0.52 11.0 4.3 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4398) CYTH PF01928.21 AID33527.1 - 7.4e-13 48.8 0.0 8.8e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 CYTH domain TetR_C_32 PF09209.11 AID33528.1 - 1.2e-40 138.4 0.4 2.2e-40 137.5 0.4 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID33528.1 - 6e-14 51.6 0.4 1.3e-13 50.5 0.4 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID33528.1 - 0.0066 16.8 4.3 0.053 13.8 0.2 2.5 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain OEP PF02321.18 AID33529.1 - 4.4e-05 23.4 12.9 0.00046 20.0 3.6 2.1 2 0 0 2 2 2 2 Outer membrane efflux protein Biotin_lipoyl_2 PF13533.6 AID33529.1 - 6e-05 22.8 4.3 6e-05 22.8 4.3 3.0 3 1 0 3 3 3 1 Biotin-lipoyl like HrpB7 PF09486.10 AID33529.1 - 0.014 15.8 9.4 0.014 15.8 9.4 2.3 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF2802 PF10975.8 AID33529.1 - 0.035 14.2 2.5 0.089 12.9 2.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) CsgF PF10614.9 AID33529.1 - 0.046 13.9 0.9 0.091 13.0 0.1 1.9 1 1 1 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein Vps5 PF09325.10 AID33529.1 - 0.066 12.8 0.6 0.097 12.2 0.6 1.2 1 0 0 1 1 1 0 Vps5 C terminal like Phage_GP20 PF06810.11 AID33529.1 - 0.093 12.5 4.5 0.15 11.9 4.1 1.6 1 1 0 1 1 1 0 Phage minor structural protein GP20 Csm1_N PF18504.1 AID33529.1 - 0.099 13.0 0.7 0.29 11.5 0.7 1.9 1 1 0 1 1 1 0 Csm1 N-terminal domain DUF4407 PF14362.6 AID33529.1 - 0.1 11.9 14.2 0.19 11.1 14.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) OB_MalK PF17912.1 AID33529.1 - 0.17 12.7 0.1 0.49 11.3 0.1 1.9 1 0 0 1 1 1 0 MalK OB fold domain gpW PF02831.15 AID33529.1 - 0.45 10.5 5.6 0.27 11.2 2.5 2.3 2 0 0 2 2 2 0 gpW ABC_tran_CTD PF16326.5 AID33529.1 - 1.2 9.4 6.6 1.6 9.0 4.5 2.1 1 1 2 3 3 3 0 ABC transporter C-terminal domain ATP-synt_DE PF00401.20 AID33529.1 - 7 7.0 19.8 5.4 7.4 7.1 3.3 1 1 2 3 3 3 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HlyD_3 PF13437.6 AID33530.1 - 1.6e-06 28.8 0.0 2.6e-06 28.1 0.0 1.4 1 1 0 1 1 1 1 HlyD family secretion protein CpXC PF14353.6 AID33530.1 - 0.082 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 CpXC protein ABC_tran PF00005.27 AID33531.1 - 1.8e-32 112.7 0.0 3.7e-32 111.7 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 AID33531.1 - 3.2e-13 50.2 0.1 8.6e-08 32.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 AID33531.1 - 0.00018 22.2 0.0 0.00031 21.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 AID33531.1 - 0.00066 20.2 0.0 0.00095 19.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID33531.1 - 0.0021 17.9 0.0 2 8.0 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 AID33531.1 - 0.0028 17.1 0.0 1.8 7.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID33531.1 - 0.0057 16.4 0.1 0.011 15.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 AID33531.1 - 0.0085 16.5 0.2 0.32 11.4 0.1 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 AID33531.1 - 0.023 14.2 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region SbcCD_C PF13558.6 AID33531.1 - 0.042 14.1 0.0 0.47 10.7 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC2_membrane_3 PF12698.7 AID33532.1 - 2.5e-45 155.1 11.4 2.8e-45 154.9 11.4 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 AID33532.1 - 1.3e-35 122.8 21.9 6e-32 110.8 17.3 2.3 2 0 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_2 PF12679.7 AID33532.1 - 3.1e-22 79.2 18.8 9.3e-22 77.6 18.8 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 AID33532.1 - 5.8e-10 39.4 9.8 3.3e-08 33.7 7.3 2.4 2 0 0 2 2 2 2 ABC-2 family transporter protein PALP PF00291.25 AID33533.1 - 3.6e-71 240.0 1.8 4.2e-71 239.8 1.8 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Rubrerythrin PF02915.17 AID33535.1 - 6.7e-38 130.2 2.0 8.9e-38 129.8 2.0 1.2 1 0 0 1 1 1 1 Rubrerythrin VIT1 PF01988.19 AID33535.1 - 8.1e-08 32.4 22.4 3.3e-05 23.9 7.4 2.6 2 1 1 3 3 3 2 VIT family Ferritin PF00210.24 AID33535.1 - 0.00083 19.3 0.4 0.0014 18.5 0.4 1.4 1 0 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.6 AID33535.1 - 0.047 13.9 2.2 5.1 7.3 1.0 2.3 2 0 0 2 2 2 0 Ferritin-like domain COQ7 PF03232.13 AID33535.1 - 0.081 12.7 0.3 0.92 9.3 0.0 2.2 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 ABM PF03992.16 AID33536.1 - 5.3e-18 64.9 0.0 6.6e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF4188 PF13826.6 AID33536.1 - 0.064 13.6 0.0 0.085 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4188) DUF3291 PF11695.8 AID33536.1 - 0.11 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) NIPSNAP PF07978.13 AID33537.1 - 5.1e-29 100.5 0.2 6e-29 100.3 0.2 1.0 1 0 0 1 1 1 1 NIPSNAP HTH_20 PF12840.7 AID33538.1 - 1.3e-10 41.1 0.5 3.5e-10 39.8 0.5 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID33538.1 - 1.9e-08 34.1 0.0 3.7e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID33538.1 - 4.4e-05 23.3 0.1 4.4e-05 23.3 0.1 2.1 3 1 0 3 3 3 1 MarR family HTH_IclR PF09339.10 AID33538.1 - 0.00014 21.6 1.5 0.00037 20.2 1.5 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 AID33538.1 - 0.00038 19.9 0.3 0.00075 19.0 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 AID33538.1 - 0.0062 16.4 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 AID33538.1 - 0.11 12.4 0.6 0.98 9.4 0.1 2.2 2 0 0 2 2 2 0 MarR family GntR PF00392.21 AID33538.1 - 0.25 11.0 1.4 0.5 10.1 0.3 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family LigD_N PF13298.6 AID33539.1 - 1.2e-38 131.6 0.2 2.6e-38 130.5 0.2 1.6 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) DNA_ligase_A_C PF04679.15 AID33539.1 - 2.8e-26 92.0 0.1 5.8e-25 87.8 0.0 2.4 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region DNA_ligase_A_M PF01068.21 AID33539.1 - 3.8e-24 85.5 0.0 5.9e-24 84.8 0.0 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 AID33539.1 - 2.1e-05 24.9 0.0 3.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 RNA ligase DNA_primase_S PF01896.19 AID33539.1 - 6.8e-05 23.0 0.0 0.00015 21.9 0.0 1.6 1 1 0 1 1 1 1 DNA primase small subunit mRNA_cap_enzyme PF01331.19 AID33539.1 - 0.17 11.7 0.0 0.35 10.7 0.0 1.4 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain Ku PF02735.16 AID33540.1 - 8.5e-31 107.2 0.0 1.1e-30 106.9 0.0 1.1 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain DUF892 PF05974.12 AID33541.1 - 3.8e-63 212.3 6.4 4.3e-63 212.1 6.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) CPSase_L_D3 PF02787.19 AID33541.1 - 0.14 12.5 1.4 3.5 8.0 0.1 2.2 2 0 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ribonuc_L-PSP PF01042.21 AID33544.1 - 2.2e-09 37.4 0.1 1.3e-08 34.9 0.1 1.9 1 1 0 1 1 1 1 Endoribonuclease L-PSP YCII PF03795.14 AID33545.1 - 1.1e-18 67.4 0.1 1.3e-18 67.1 0.1 1.1 1 0 0 1 1 1 1 YCII-related domain Sigma70_r2 PF04542.14 AID33546.1 - 2.8e-05 23.8 1.7 7.4e-05 22.4 0.1 1.9 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r2 PF04542.14 AID33547.1 - 0.0063 16.3 0.1 0.0089 15.8 0.1 1.2 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID33548.1 - 0.00045 19.8 0.0 0.00087 18.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 GST_N_3 PF13417.6 AID33549.1 - 2.4e-13 50.3 0.0 3.5e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID33549.1 - 6.6e-12 45.5 0.1 9.8e-12 44.9 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 AID33549.1 - 5e-08 33.2 0.0 7.9e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID33549.1 - 2.4e-07 30.9 0.0 4e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 AID33549.1 - 2.8e-07 30.8 0.0 5.3e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID33549.1 - 7.5e-07 29.1 3.2 2.9e-06 27.2 0.9 2.8 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 AID33549.1 - 0.00079 19.7 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 AID33549.1 - 0.003 18.3 0.0 0.0058 17.3 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase N-terminal domain PALP PF00291.25 AID33550.1 - 3e-67 227.1 2.8 3.4e-67 226.9 2.8 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme LysE PF01810.18 AID33551.1 - 2.3e-27 95.7 17.8 2.6e-27 95.6 17.8 1.0 1 0 0 1 1 1 1 LysE type translocator GSDH PF07995.11 AID33553.1 - 2.2e-16 60.1 0.1 2.2e-15 56.8 0.1 2.2 1 1 1 2 2 2 1 Glucose / Sorbosone dehydrogenase NHL PF01436.21 AID33553.1 - 2.6e-07 30.3 6.5 0.00016 21.5 0.1 3.7 4 0 0 4 4 4 2 NHL repeat Lactonase PF10282.9 AID33553.1 - 0.00022 20.6 0.0 0.29 10.3 0.0 2.2 1 1 0 2 2 2 2 Lactonase, 7-bladed beta-propeller PD40 PF07676.12 AID33553.1 - 0.031 14.2 0.2 0.53 10.3 0.0 2.7 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat HrcA PF01628.21 AID33554.1 - 1.5e-53 181.9 0.3 2e-53 181.6 0.3 1.1 1 0 0 1 1 1 1 HrcA protein C terminal domain HrcA_DNA-bdg PF03444.15 AID33554.1 - 0.00025 20.6 0.0 0.00057 19.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TetR_C_36 PF18598.1 AID33554.1 - 0.004 17.1 0.1 0.011 15.7 0.1 1.8 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF2111 PF09884.9 AID33554.1 - 0.079 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) RNase_PH PF01138.21 AID33555.1 - 2.3e-22 79.9 0.0 3.6e-22 79.3 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 AID33555.1 - 7.9e-11 41.8 0.0 2e-10 40.6 0.0 1.7 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 Glyoxalase PF00903.25 AID33556.1 - 1.9e-12 47.5 0.0 2.9e-12 46.9 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID33556.1 - 0.0069 17.2 0.0 0.012 16.4 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Ham1p_like PF01725.16 AID33557.1 - 1.8e-55 187.8 0.0 2.1e-55 187.6 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Radical_SAM PF04055.21 AID33558.1 - 1.4e-20 74.3 0.0 4.7e-20 72.6 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily HemN_C PF06969.16 AID33558.1 - 3.7e-08 33.3 2.0 4.9e-08 32.9 0.2 2.2 3 0 0 3 3 3 1 HemN C-terminal domain Fer4_14 PF13394.6 AID33558.1 - 0.026 14.6 0.0 0.1 12.8 0.0 1.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 AID33558.1 - 0.18 12.0 0.0 0.46 10.7 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain LMWPc PF01451.21 AID33559.1 - 2.2e-08 34.6 0.5 2.8e-05 24.5 0.0 2.1 1 1 1 2 2 2 2 Low molecular weight phosphotyrosine protein phosphatase Ssu72 PF04722.13 AID33559.1 - 0.00092 18.8 0.2 0.28 10.7 0.0 2.1 1 1 1 2 2 2 2 Ssu72-like protein TP_methylase PF00590.20 AID33562.1 - 1.8e-32 113.0 2.1 2.6e-32 112.5 2.1 1.3 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases UPF0102 PF02021.17 AID33563.1 - 8.2e-22 77.2 0.5 1e-21 77.0 0.5 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 NucS PF01939.16 AID33563.1 - 0.0011 18.4 0.1 0.0013 18.1 0.1 1.1 1 0 0 1 1 1 1 Endonuclease NucS NERD PF08378.11 AID33563.1 - 0.034 14.6 0.0 0.042 14.3 0.0 1.3 1 0 0 1 1 1 0 Nuclease-related domain Hjc PF01870.18 AID33563.1 - 0.038 14.0 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 AID33563.1 - 0.088 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 REase_AHJR-like Mrr_cat PF04471.12 AID33563.1 - 0.14 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease BacA PF02673.18 AID33564.1 - 3e-77 259.8 12.3 3.4e-77 259.6 12.3 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA GST_N_3 PF13417.6 AID33565.1 - 4.8e-08 33.3 0.0 1e-07 32.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID33565.1 - 1.2e-06 28.7 0.0 3.2e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 AID33565.1 - 1.7e-06 28.1 0.0 3e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 AID33565.1 - 3.9e-06 27.0 0.0 7.4e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID33565.1 - 9e-06 25.6 0.1 1.8e-05 24.7 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 AID33565.1 - 0.00015 22.0 0.0 0.00028 21.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF1730 PF08331.10 AID33566.1 - 1.4e-23 82.5 0.0 2.5e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1730) Fer4_16 PF13484.6 AID33566.1 - 1.7e-19 70.5 4.9 2.9e-19 69.7 4.9 1.4 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 AID33566.1 - 5.1e-07 30.2 5.5 1.4e-06 28.8 5.5 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID33566.1 - 5.3e-06 26.5 0.6 0.0094 16.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID33566.1 - 2e-05 24.6 4.6 0.013 15.6 0.9 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 AID33566.1 - 0.00019 21.8 0.3 0.04 14.4 0.1 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain HEAT_2 PF13646.6 AID33566.1 - 0.00021 21.6 1.5 0.00021 21.6 1.5 2.1 2 0 0 2 2 2 1 HEAT repeats Fer4_6 PF12837.7 AID33566.1 - 0.00023 21.1 8.7 0.092 12.9 3.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain HEAT PF02985.22 AID33566.1 - 0.00038 20.5 0.1 0.0019 18.3 0.0 2.2 2 0 0 2 2 2 1 HEAT repeat Fer4 PF00037.27 AID33566.1 - 0.00095 18.9 10.2 0.0019 17.9 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain HEAT_EZ PF13513.6 AID33566.1 - 0.0014 19.1 0.2 0.0014 19.1 0.2 2.3 2 0 0 2 2 2 1 HEAT-like repeat Fer4_3 PF12798.7 AID33566.1 - 0.0036 18.1 9.6 0.19 12.7 3.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 AID33566.1 - 0.0038 17.2 12.7 0.0097 16.0 3.9 3.0 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_21 PF14697.6 AID33566.1 - 0.013 15.6 4.2 0.88 9.8 1.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 AID33566.1 - 0.057 14.0 6.7 2.1 9.1 2.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 AID33566.1 - 0.61 10.7 8.7 0.91 10.1 1.9 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Epimerase PF01370.21 AID33567.1 - 0.00062 19.3 0.0 0.0048 16.4 0.0 2.4 2 1 1 3 3 3 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 AID33567.1 - 0.012 16.2 0.1 0.022 15.3 0.1 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent RmlD_sub_bind PF04321.17 AID33567.1 - 0.064 12.4 0.0 0.093 11.8 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Cecropin PF00272.19 AID33567.1 - 0.16 11.7 1.8 0.26 11.0 0.5 2.0 2 0 0 2 2 2 0 Cecropin family Glucokinase PF02685.16 AID33568.1 - 7.7e-111 370.1 0.0 1e-110 369.7 0.0 1.1 1 0 0 1 1 1 1 Glucokinase Peptidase_M74 PF03411.13 AID33568.1 - 2e-104 348.4 0.0 2.7e-104 348.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase ROK PF00480.20 AID33568.1 - 0.00056 19.5 0.0 0.0015 18.0 0.0 1.6 1 1 0 1 1 1 1 ROK family ABC_tran PF00005.27 AID33569.1 - 1e-34 120.0 0.0 2.4e-34 118.8 0.0 1.7 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID33569.1 - 1.1e-33 117.1 5.8 1.6e-33 116.5 5.8 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID33569.1 - 3e-09 36.6 0.4 2.1e-07 30.6 0.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 AID33569.1 - 8.6e-06 24.8 2.1 0.00038 19.4 0.8 2.6 2 1 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID33569.1 - 9.3e-05 22.4 0.0 0.00025 21.0 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 AID33569.1 - 0.00026 21.3 0.5 0.0019 18.5 0.4 2.3 2 1 0 2 2 1 1 AAA domain AAA PF00004.29 AID33569.1 - 0.0011 19.4 0.1 0.029 14.8 0.1 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 AID33569.1 - 0.0012 18.6 0.0 0.0021 17.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID33569.1 - 0.0015 19.0 1.7 0.0088 16.4 1.7 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID33569.1 - 0.0058 16.3 0.1 0.02 14.6 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF3995 PF13160.6 AID33569.1 - 0.0061 16.9 1.3 0.022 15.1 1.3 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF3995) AAA_23 PF13476.6 AID33569.1 - 0.015 15.8 0.0 0.027 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 AID33569.1 - 0.016 15.0 0.1 0.044 13.6 0.0 1.7 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 AID33569.1 - 0.035 14.1 0.1 0.56 10.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 AID33569.1 - 0.065 13.5 0.3 0.25 11.6 0.2 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID33569.1 - 0.066 12.5 1.5 0.21 10.8 0.2 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_30 PF13604.6 AID33569.1 - 0.096 12.4 5.3 0.07 12.9 2.8 2.2 2 1 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID33569.1 - 0.12 12.0 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 AID33569.1 - 0.13 12.3 0.4 0.63 10.1 0.3 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain SbcCD_C PF13558.6 AID33569.1 - 0.24 11.7 0.9 2.2 8.6 0.9 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DapB_C PF05173.14 AID33570.1 - 5.7e-42 142.6 0.0 8e-42 142.1 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 AID33570.1 - 1.3e-32 112.5 0.1 2e-32 112.0 0.1 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 AID33570.1 - 0.021 15.3 0.0 0.058 13.8 0.0 1.6 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Hexapep PF00132.24 AID33570.1 - 0.046 13.5 0.3 0.18 11.6 0.3 2.1 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) His_Phos_1 PF00300.22 AID33571.1 - 3.8e-42 144.2 0.1 4.5e-42 143.9 0.1 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Aminotran_MocR PF12897.7 AID33571.1 - 0.0098 14.7 0.1 0.013 14.3 0.1 1.1 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Ni_hydr_CYTB PF01292.20 AID33572.1 - 1.2e-21 77.1 10.3 1.5e-21 76.8 10.3 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AID33572.1 - 0.057 14.0 7.7 0.16 12.6 1.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4405) Phage_holin_2_4 PF16082.5 AID33572.1 - 0.066 13.0 0.5 0.15 11.8 0.5 1.6 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like Ion_trans_2 PF07885.16 AID33572.1 - 0.097 12.7 0.1 0.097 12.7 0.1 2.4 2 2 1 3 3 3 0 Ion channel Sdh_cyt PF01127.22 AID33572.1 - 0.8 9.7 8.4 0.5 10.4 2.2 2.2 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Ferric_reduct PF01794.19 AID33572.1 - 1.1 9.4 10.5 0.55 10.4 1.8 2.2 1 1 1 2 2 2 0 Ferric reductase like transmembrane component DUF202 PF02656.15 AID33572.1 - 2.8 8.4 9.6 97 3.5 9.6 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF202) PepSY PF03413.19 AID33573.1 - 0.0002 21.8 0.0 0.0003 21.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain Response_reg PF00072.24 AID33574.1 - 7.2e-23 80.9 0.0 1e-22 80.4 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID33574.1 - 9.2e-20 70.5 0.0 3.5e-19 68.6 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 AID33574.1 - 0.0058 16.5 0.5 0.03 14.2 0.1 2.3 2 1 0 2 2 2 1 MarR family HATPase_c PF02518.26 AID33575.1 - 7.6e-15 55.4 0.0 1.7e-14 54.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID33575.1 - 1.6e-06 28.1 0.2 1e-05 25.5 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 AID33575.1 - 6e-06 26.1 0.0 1.4e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HisKA PF00512.25 AID33575.1 - 0.0081 16.2 0.2 0.027 14.5 0.2 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID33575.1 - 0.071 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NAD_binding_1 PF00175.21 AID33576.1 - 2.2e-16 60.5 0.0 3.7e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NQR2_RnfD_RnfE PF03116.15 AID33576.1 - 5.7e-11 42.4 24.2 1e-07 31.7 4.2 2.2 1 1 1 2 2 2 2 NQR2, RnfD, RnfE family FAD_binding_6 PF00970.24 AID33576.1 - 0.0082 16.5 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 AID33576.1 - 0.073 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain ApbE PF02424.15 AID33577.1 - 6.9e-42 143.8 0.1 4.1e-28 98.6 0.1 2.0 1 1 1 2 2 2 2 ApbE family FMN_bind PF04205.14 AID33578.1 - 9.6e-06 26.1 0.0 2e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 FMN-binding domain Pyr_redox_2 PF07992.14 AID33579.1 - 1.1e-32 113.4 1.3 1.5e-32 113.0 1.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase cNMP_binding PF00027.29 AID33579.1 - 3.4e-17 62.3 0.1 1.1e-16 60.6 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Pyr_redox_3 PF13738.6 AID33579.1 - 1.4e-16 60.7 0.3 1.3e-10 41.1 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID33579.1 - 5.2e-09 36.5 2.7 1.9e-07 31.6 0.1 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID33579.1 - 4.2e-07 29.5 1.9 0.00012 21.4 0.2 2.6 3 0 0 3 3 3 2 Thi4 family FAD_oxidored PF12831.7 AID33579.1 - 1.3e-05 24.7 2.2 1.3e-05 24.7 2.2 3.4 3 1 1 4 4 4 1 FAD dependent oxidoreductase K_oxygenase PF13434.6 AID33579.1 - 2.9e-05 23.4 0.7 0.022 13.9 0.1 2.8 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 AID33579.1 - 8.6e-05 21.8 5.6 8.6e-05 21.8 5.6 3.9 2 2 1 3 3 3 2 FAD binding domain FAD_binding_3 PF01494.19 AID33579.1 - 9e-05 21.9 2.2 0.00098 18.5 0.6 2.7 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 AID33579.1 - 0.0002 21.5 7.6 0.002 18.3 2.5 3.3 3 1 1 4 4 3 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID33579.1 - 0.00029 19.7 6.8 0.00039 19.2 0.8 2.9 3 0 0 3 3 3 1 HI0933-like protein DAO PF01266.24 AID33579.1 - 0.00037 20.2 13.8 0.078 12.5 13.7 3.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 AID33579.1 - 0.0013 17.8 1.8 0.25 10.3 0.7 2.3 2 0 0 2 2 2 2 Lycopene cyclase protein GIDA PF01134.22 AID33579.1 - 0.0064 15.6 1.4 0.0064 15.6 1.4 3.4 3 1 1 4 4 4 1 Glucose inhibited division protein A MliC PF09864.9 AID33579.1 - 0.023 14.7 0.4 0.25 11.3 0.4 2.5 1 1 1 2 2 2 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme FMO-like PF00743.19 AID33579.1 - 0.031 12.7 0.2 0.15 10.4 0.0 1.9 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like 3HCDH_N PF02737.18 AID33579.1 - 0.33 10.8 2.1 2.1 8.2 0.2 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 AID33579.1 - 1.1 9.3 5.6 7.4 6.5 0.3 3.2 3 0 0 3 3 3 0 FAD-NAD(P)-binding zf-UBP PF02148.19 AID33580.1 - 9.9e-10 38.6 4.8 1.4e-09 38.2 4.8 1.2 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein Albumin_I_a PF16720.5 AID33580.1 - 1.6 8.7 6.6 0.48 10.4 0.7 2.3 2 0 0 2 2 2 0 Albumin I chain a DUF2127 PF09900.9 AID33582.1 - 2.9e-28 98.9 8.3 3.3e-28 98.7 8.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2127) DUF1232 PF06803.12 AID33583.1 - 1.4e-14 53.6 7.0 1.4e-14 53.6 7.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1232) TPR_2 PF07719.17 AID33585.1 - 6.1e-13 47.8 3.0 0.14 12.4 0.0 6.0 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID33585.1 - 6.7e-11 41.7 0.2 0.00034 20.2 0.0 4.2 3 1 1 4 4 4 2 TPR repeat TPR_8 PF13181.6 AID33585.1 - 1.7e-06 27.8 0.0 6.1 7.3 0.0 4.8 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 AID33585.1 - 8.2e-06 26.2 8.8 0.18 12.3 1.2 4.9 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 AID33585.1 - 3.8e-05 23.3 0.2 0.14 12.1 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 AID33585.1 - 0.00011 22.3 0.1 0.52 10.8 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID33585.1 - 0.00016 22.2 32.8 0.0019 18.8 0.3 7.4 5 3 3 8 8 7 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID33585.1 - 0.00071 20.2 29.2 0.013 16.1 5.3 5.9 3 1 2 5 5 5 3 Tetratricopeptide repeat BTAD PF03704.17 AID33585.1 - 0.0019 18.6 7.2 0.0019 18.6 7.2 2.9 3 0 0 3 3 3 1 Bacterial transcriptional activator domain ANAPC3 PF12895.7 AID33585.1 - 0.0041 17.3 2.0 0.014 15.6 0.1 2.4 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 AID33585.1 - 0.63 10.0 7.3 25 4.9 0.1 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID33585.1 - 0.85 10.4 36.3 0.074 13.7 1.4 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_9 PF13371.6 AID33585.1 - 9.8 6.4 11.9 1.9 8.7 0.5 4.1 3 1 0 4 4 4 0 Tetratricopeptide repeat PALP PF00291.25 AID33586.1 - 6.4e-58 196.5 2.6 7.3e-58 196.3 2.6 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Pyridoxal_deC PF00282.19 AID33588.1 - 1.3e-59 201.8 0.0 1.6e-59 201.5 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 AID33588.1 - 2.9e-06 26.8 0.0 3.8e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 AID33588.1 - 0.0013 17.7 0.0 0.0028 16.7 0.0 1.5 1 0 0 1 1 1 1 Aminotransferase class-V Trans_reg_C PF00486.28 AID33590.1 - 3e-15 56.1 0.0 1.4e-14 53.9 0.0 2.1 2 1 0 2 2 2 1 Transcriptional regulatory protein, C terminal TPR_2 PF07719.17 AID33590.1 - 1.2e-11 43.8 17.9 0.024 14.7 0.0 7.2 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 AID33590.1 - 3.8e-09 36.9 11.2 0.14 12.7 0.2 4.9 2 1 2 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 AID33590.1 - 9.6e-08 31.7 3.2 1.1 9.7 0.0 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 AID33590.1 - 1.2e-07 32.0 19.3 0.86 10.6 0.2 7.0 3 1 3 6 6 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 AID33590.1 - 2.2e-07 30.4 8.8 0.041 13.6 0.0 6.1 5 2 2 7 7 7 3 TPR repeat TPR_16 PF13432.6 AID33590.1 - 4.8e-07 30.3 22.7 0.051 14.2 0.6 5.0 2 1 1 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 AID33590.1 - 3.6e-05 23.4 10.0 9.1 6.3 0.1 6.2 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_17 PF13431.6 AID33590.1 - 3.8e-05 23.8 5.9 4.6 7.8 0.0 5.4 5 0 0 5 5 5 2 Tetratricopeptide repeat FlgO PF17680.1 AID33590.1 - 0.00011 21.9 0.0 0.0021 17.8 0.0 2.4 1 1 0 1 1 1 1 FlgO protein TolB_N PF04052.13 AID33590.1 - 0.00027 21.1 0.0 0.0026 17.9 0.0 2.1 2 0 0 2 2 2 1 TolB amino-terminal domain ANAPC3 PF12895.7 AID33590.1 - 0.0015 18.7 5.1 0.0019 18.4 0.6 3.0 2 1 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.14 AID33590.1 - 0.002 18.5 19.5 0.0029 18.1 0.6 5.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 AID33590.1 - 0.031 14.6 2.4 3.3 8.1 0.1 3.7 2 2 2 4 4 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 AID33590.1 - 0.11 12.8 19.6 0.049 13.9 1.4 4.8 3 1 3 6 6 6 0 Tetratricopeptide repeat TPR_6 PF13174.6 AID33590.1 - 0.24 12.1 2.3 3.2 8.6 1.1 3.4 4 0 0 4 4 3 0 Tetratricopeptide repeat Stn1 PF10451.9 AID33591.1 - 0.00086 18.3 0.0 0.001 18.1 0.0 1.0 1 0 0 1 1 1 1 Telomere regulation protein Stn1 DUF1127 PF06568.11 AID33591.1 - 5.6 6.8 10.4 1.8 8.3 6.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1127) zf-CDGSH PF09360.10 AID33593.1 - 5.2e-31 106.6 10.3 1.6e-17 63.4 0.3 3.4 4 0 0 4 4 4 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 AID33593.1 - 9.5e-24 83.3 0.2 1.9e-23 82.3 0.2 1.5 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster zf-UBR PF02207.20 AID33593.1 - 0.17 12.0 4.8 2.8 8.2 0.8 2.5 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Cupredoxin_1 PF13473.6 AID33594.1 - 1.8e-10 40.9 0.0 2.1e-10 40.6 0.0 1.0 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 AID33594.1 - 1.5e-08 35.0 1.4 6.1e-07 29.8 1.4 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DprA_WH PF17782.1 AID33595.1 - 0.023 14.8 0.2 0.093 12.9 0.2 2.1 1 0 0 1 1 1 0 DprA winged helix domain Malate_synthase PF01274.22 AID33596.1 - 3.5e-170 566.8 0.0 4e-170 566.5 0.0 1.0 1 0 0 1 1 1 1 Malate synthase DUF308 PF03729.13 AID33597.1 - 7.6e-08 32.6 6.3 7.6e-08 32.6 6.3 2.4 2 0 0 2 2 2 1 Short repeat of unknown function (DUF308) DUF2070 PF09843.9 AID33597.1 - 0.019 13.3 3.8 0.022 13.1 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TetR_N PF00440.23 AID33598.1 - 8.3e-12 44.7 0.2 1.3e-11 44.1 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 AID33598.1 - 0.013 15.7 0.1 0.039 14.2 0.1 1.7 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal Sigma70_r4_2 PF08281.12 AID33598.1 - 0.019 14.6 0.0 0.044 13.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 DUF3303 PF11746.8 AID33599.1 - 7.5e-11 42.2 0.1 9.2e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) Mg_chelatase PF01078.21 AID33600.1 - 2.7e-66 222.9 0.0 4.1e-66 222.3 0.0 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ChlI PF13541.6 AID33600.1 - 6.5e-40 135.7 0.0 1e-39 135.1 0.0 1.3 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Mg_chelatase_C PF13335.6 AID33600.1 - 1.7e-27 95.9 2.4 1.7e-27 95.9 2.4 1.9 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI C-terminal MCM PF00493.23 AID33600.1 - 3.7e-06 26.2 0.0 5.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 AID33600.1 - 0.0027 17.4 0.0 0.011 15.5 0.0 1.9 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_5 PF07728.14 AID33600.1 - 0.0082 16.2 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) DUF4719 PF15843.5 AID33600.1 - 4.7 7.3 6.2 8.8 6.4 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) GSH-S_ATP PF02955.16 AID33602.1 - 1.6e-73 245.8 0.0 2.4e-73 245.3 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain GSH-S_N PF02951.14 AID33602.1 - 2.4e-43 147.0 0.1 4e-43 146.3 0.1 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, N-terminal domain RimK PF08443.11 AID33602.1 - 2.6e-17 63.0 0.0 3.6e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_YheCD PF14398.6 AID33602.1 - 2.4e-06 27.0 0.0 1.2e-05 24.7 0.0 2.1 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 AID33602.1 - 0.015 15.3 0.0 0.028 14.5 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain ATPgrasp_ST PF14397.6 AID33602.1 - 0.045 13.0 0.0 0.093 12.0 0.0 1.5 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp TTL PF03133.15 AID33602.1 - 0.12 11.5 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family Glycos_transf_2 PF00535.26 AID33603.1 - 1.6e-20 73.6 0.0 2.3e-20 73.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID33603.1 - 0.0015 18.5 0.0 0.0023 17.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 GtrA PF04138.14 AID33604.1 - 9.7e-18 64.5 12.0 1.2e-17 64.2 12.0 1.1 1 0 0 1 1 1 1 GtrA-like protein Phage_holin_3_3 PF16083.5 AID33604.1 - 0.0076 16.4 3.8 0.0076 16.4 3.8 2.5 1 1 1 2 2 2 1 LydA holin phage, holin superfamily III DUF2207 PF09972.9 AID33604.1 - 5.5 5.6 7.3 0.45 9.2 2.5 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) EAL PF00563.20 AID33606.1 - 1.3e-69 234.4 0.0 1.8e-69 233.9 0.0 1.2 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID33606.1 - 3.5e-35 121.1 0.0 9.8e-35 119.7 0.0 1.7 2 0 0 2 2 2 1 Diguanylate cyclase, GGDEF domain OB_aCoA_assoc PF01796.17 AID33606.1 - 0.073 13.1 0.0 0.51 10.4 0.0 2.4 2 0 0 2 2 2 0 DUF35 OB-fold domain, acyl-CoA-associated adh_short_C2 PF13561.6 AID33609.1 - 1.1e-54 185.5 0.2 1.4e-54 185.2 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33609.1 - 2e-44 151.4 0.0 4.6e-44 150.2 0.0 1.5 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 AID33609.1 - 0.0005 20.0 0.0 0.0009 19.2 0.0 1.4 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 AID33609.1 - 0.013 14.7 0.0 0.017 14.3 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Epimerase PF01370.21 AID33609.1 - 0.063 12.7 0.1 0.091 12.2 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DGOK PF05035.12 AID33610.1 - 9.8e-97 323.3 0.3 1.1e-96 323.1 0.3 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase FGGY_N PF00370.21 AID33610.1 - 0.11 12.1 0.0 0.57 9.7 0.0 1.9 1 1 1 2 2 2 0 FGGY family of carbohydrate kinases, N-terminal domain Aldolase PF01081.19 AID33611.1 - 1.3e-25 90.0 2.8 1.8e-25 89.6 2.8 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase HMGL-like PF00682.19 AID33611.1 - 0.042 13.4 0.3 0.18 11.3 0.0 2.1 3 0 0 3 3 3 0 HMGL-like SGL PF08450.12 AID33612.1 - 2.9e-59 200.6 0.0 3.4e-59 200.4 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF4585 PF15232.6 AID33612.1 - 0.16 12.0 0.1 0.75 9.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4585) Dala_Dala_lig_C PF07478.13 AID33613.1 - 6.1e-06 25.9 0.0 3.6e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus MmgE_PrpD PF03972.14 AID33613.1 - 0.021 13.4 0.9 0.028 13.0 0.2 1.5 2 0 0 2 2 2 0 MmgE/PrpD family Auxin_BP PF02041.16 AID33614.1 - 0.0067 16.1 0.0 0.0082 15.8 0.0 1.1 1 0 0 1 1 1 1 Auxin binding protein GntR PF00392.21 AID33615.1 - 5.5e-16 58.0 0.3 1.1e-15 57.0 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 AID33615.1 - 6.7e-16 58.9 0.3 1.3e-15 58.0 0.3 1.4 1 0 0 1 1 1 1 FCD domain MarR_2 PF12802.7 AID33615.1 - 0.00059 19.7 1.2 0.0011 18.8 0.2 2.0 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 AID33615.1 - 0.00089 19.1 0.0 0.0019 18.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 AID33615.1 - 0.0043 17.4 0.0 0.012 15.9 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 AID33615.1 - 0.0064 16.3 0.0 0.013 15.3 0.0 1.5 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_IclR PF09339.10 AID33615.1 - 0.01 15.7 0.4 0.08 12.8 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 AID33615.1 - 0.011 15.6 0.0 0.022 14.7 0.0 1.5 1 0 0 1 1 1 0 MarR family PaaX PF07848.12 AID33615.1 - 0.011 15.9 0.1 0.024 14.8 0.1 1.5 1 0 0 1 1 1 0 PaaX-like protein HTH_20 PF12840.7 AID33615.1 - 0.013 15.6 0.4 0.12 12.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 AID33615.1 - 0.014 15.5 0.0 0.035 14.3 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.6 AID33615.1 - 0.019 14.9 0.1 0.037 14.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID33615.1 - 0.033 14.1 0.6 0.1 12.6 0.0 2.0 2 0 0 2 2 2 0 HTH domain DUF3489 PF11994.8 AID33615.1 - 0.058 13.5 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) Pro-kuma_activ PF09286.11 AID33615.1 - 0.069 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain HTH_27 PF13463.6 AID33615.1 - 0.11 13.0 0.0 0.26 11.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_40 PF14493.6 AID33615.1 - 0.11 12.9 0.2 0.52 10.8 0.3 2.3 1 1 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 AID33615.1 - 0.27 10.9 2.5 7.4 6.3 0.1 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 DUF1330 PF07045.11 AID33616.1 - 3.1e-34 117.2 0.2 3.4e-34 117.0 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) OMPdecase PF00215.24 AID33617.1 - 2e-44 151.8 0.5 2.3e-44 151.7 0.5 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family FMN_red PF03358.15 AID33618.1 - 1.4e-34 119.1 0.0 1.7e-34 118.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID33618.1 - 6.4e-13 48.9 0.0 7.6e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold IDH PF03971.14 AID33618.1 - 0.16 10.4 0.0 0.21 10.0 0.0 1.0 1 0 0 1 1 1 0 Monomeric isocitrate dehydrogenase RrnaAD PF00398.20 AID33619.1 - 3.4e-06 26.3 0.0 4.5e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 AID33619.1 - 3.9e-06 27.5 0.0 6.2e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID33619.1 - 0.0024 18.5 0.0 0.0038 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33619.1 - 0.015 16.0 0.0 0.022 15.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 AID33619.1 - 0.015 15.0 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 AID33619.1 - 0.016 15.0 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DnaJ_C PF01556.18 AID33620.1 - 1.2e-43 148.7 0.0 1.6e-43 148.4 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 AID33620.1 - 3e-26 91.3 0.4 5e-26 90.6 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 AID33620.1 - 9.8e-14 51.5 17.3 1.8e-13 50.6 17.3 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 AID33620.1 - 7e-05 22.7 17.8 0.0059 16.6 4.2 2.6 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein Myb_DNA-bind_4 PF13837.6 AID33620.1 - 0.036 14.4 0.3 1.5 9.2 0.0 2.5 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain TackOD1 PF18551.1 AID33620.1 - 0.16 11.7 7.3 0.093 12.4 1.1 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HypA PF01155.19 AID33620.1 - 0.17 11.9 9.7 0.92 9.5 0.8 2.4 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_10 PF16685.5 AID33620.1 - 0.34 11.1 0.1 0.34 11.1 0.1 2.2 2 0 0 2 2 2 0 zinc RING finger of MSL2 zinc-ribbons_6 PF07191.12 AID33620.1 - 3.7 7.6 8.3 17 5.5 8.3 2.1 1 1 0 1 1 1 0 zinc-ribbons HSP70 PF00012.20 AID33621.1 - 6.2e-280 929.6 13.9 7.3e-280 929.4 13.9 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 AID33621.1 - 6.9e-19 67.8 3.5 7.4e-17 61.1 0.6 2.7 2 1 0 2 2 2 2 MreB/Mbl protein FGGY_C PF02782.16 AID33621.1 - 0.0013 18.5 0.0 0.0043 16.8 0.0 1.9 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 AID33621.1 - 0.0036 17.7 8.9 0.17 12.3 0.0 4.2 3 2 0 3 3 3 2 Cell division protein FtsA DUF11 PF01345.18 AID33624.1 - 2.2e-08 34.3 2.1 0.12 12.7 0.0 5.1 5 0 0 5 5 5 3 Domain of unknown function DUF11 EB PF01683.18 AID33624.1 - 0.0043 17.3 69.1 0.034 14.4 2.0 8.4 7 1 1 8 8 8 7 EB module Ribul_P_3_epim PF00834.19 AID33625.1 - 2.9e-79 265.1 0.0 3.4e-79 264.9 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 AID33625.1 - 0.013 15.3 0.0 3.1 7.6 0.0 2.2 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain GntR PF00392.21 AID33626.1 - 5.6e-20 70.7 0.7 9.6e-20 70.0 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 AID33626.1 - 1.2e-12 48.3 0.5 2.2e-12 47.5 0.5 1.3 1 0 0 1 1 1 1 FCD domain DUF4303 PF14136.6 AID33626.1 - 0.016 14.9 0.0 2.3 7.9 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4303) PaaX PF07848.12 AID33626.1 - 0.1 12.8 0.2 0.35 11.1 0.0 1.9 2 0 0 2 2 2 0 PaaX-like protein AMP-binding PF00501.28 AID33627.1 - 3.6e-102 342.1 0.0 4.6e-102 341.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID33627.1 - 6.9e-14 52.6 0.1 1.5e-13 51.5 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ABC_membrane_2 PF06472.15 AID33628.1 - 3.3e-41 141.5 0.0 5.2e-41 140.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 AID33628.1 - 2.6e-23 83.1 0.0 5.3e-23 82.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter SbmA_BacA PF05992.12 AID33628.1 - 5.3e-13 49.1 0.5 7.4e-13 48.6 0.5 1.1 1 0 0 1 1 1 1 SbmA/BacA-like family SMC_N PF02463.19 AID33628.1 - 9.8e-06 25.2 0.2 0.048 13.1 0.0 3.1 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID33628.1 - 5e-05 23.7 0.2 0.00025 21.5 0.2 2.3 1 1 0 1 1 1 1 AAA ATPase domain ABC_membrane PF00664.23 AID33628.1 - 7.2e-05 22.6 7.6 0.00064 19.5 0.4 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region AAA_29 PF13555.6 AID33628.1 - 9.9e-05 22.0 0.0 0.00025 20.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 AID33628.1 - 0.00032 20.9 0.4 0.003 17.8 0.4 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 AID33628.1 - 0.00054 19.9 0.0 0.0026 17.7 0.0 2.1 3 0 0 3 3 2 1 NACHT domain AAA_22 PF13401.6 AID33628.1 - 0.00066 20.0 0.1 0.0032 17.8 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 AID33628.1 - 0.0066 16.2 0.3 0.034 13.9 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID33628.1 - 0.016 15.7 0.3 0.21 12.0 0.3 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 AID33628.1 - 0.016 14.3 0.0 0.035 13.2 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein DEAD PF00270.29 AID33628.1 - 0.017 14.9 0.2 3.8 7.2 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase Sigma54_activat PF00158.26 AID33628.1 - 0.044 13.5 0.0 0.085 12.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF815 PF05673.13 AID33628.1 - 0.061 12.5 0.0 0.098 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_21 PF13304.6 AID33628.1 - 0.061 13.1 0.2 1.5 8.5 0.1 2.2 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID33628.1 - 0.088 12.7 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 AID33628.1 - 0.092 13.2 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID33628.1 - 0.098 12.0 0.0 0.21 10.9 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.15 AID33628.1 - 0.11 12.4 0.1 1.6 8.6 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_5 PF07728.14 AID33628.1 - 0.14 12.1 0.0 0.46 10.5 0.0 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 AID33628.1 - 0.15 11.3 0.0 0.38 10.0 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 AID33628.1 - 0.19 11.2 0.0 0.34 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF2075 PF09848.9 AID33628.1 - 0.44 9.7 1.2 6.2 6.0 1.2 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DAO PF01266.24 AID33629.1 - 1.7e-63 215.4 7.0 1.9e-63 215.2 7.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33629.1 - 4.9e-05 23.5 2.5 7e-05 23.0 1.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID33629.1 - 0.00057 19.2 1.0 0.0063 15.8 1.7 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID33629.1 - 0.00064 18.9 10.1 0.0017 17.5 10.1 1.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 AID33629.1 - 0.0016 19.0 1.4 0.0041 17.6 1.4 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID33629.1 - 0.014 14.8 6.2 0.053 12.9 6.2 1.8 1 1 0 1 1 1 0 FAD dependent oxidoreductase Thi4 PF01946.17 AID33629.1 - 0.015 14.6 1.7 0.038 13.2 1.4 1.8 2 0 0 2 2 2 0 Thi4 family TrkA_N PF02254.18 AID33629.1 - 0.025 14.8 0.3 0.053 13.8 0.3 1.5 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 AID33629.1 - 0.064 12.8 0.2 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 AID33629.1 - 0.12 12.9 0.2 0.17 12.3 0.2 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 AID33629.1 - 0.12 12.2 0.8 0.21 11.5 0.8 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LpxI_N PF17930.1 AID33629.1 - 0.14 12.1 0.4 0.33 10.9 0.3 1.6 2 0 0 2 2 2 0 LpxI N-terminal domain Amino_oxidase PF01593.24 AID33629.1 - 0.15 11.3 0.3 0.24 10.6 0.3 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 AID33629.1 - 0.2 10.9 2.7 0.19 10.9 1.0 1.7 2 0 0 2 2 2 0 FAD binding domain HI0933_like PF03486.14 AID33629.1 - 1.5 7.4 3.7 1.7 7.3 3.0 1.4 2 0 0 2 2 2 0 HI0933-like protein Amidohydro_1 PF01979.20 AID33630.1 - 2.9e-22 79.5 2.4 7.7e-22 78.1 2.4 1.6 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID33630.1 - 5.3e-07 29.5 0.2 5.3e-07 29.5 0.2 2.9 2 1 0 3 3 3 2 Amidohydrolase family SIS PF01380.22 AID33631.1 - 2.2e-37 127.8 1.4 7.3e-19 67.9 0.7 2.2 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 AID33631.1 - 4.6e-10 39.7 1.0 0.00046 20.2 0.1 2.6 2 0 0 2 2 2 2 SIS domain UTRA PF07702.13 AID33632.1 - 1e-32 112.9 0.0 1.4e-32 112.5 0.0 1.2 1 0 0 1 1 1 1 UTRA domain GntR PF00392.21 AID33632.1 - 9e-16 57.3 0.0 2.1e-15 56.1 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 AID33632.1 - 0.0068 16.7 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 AID33632.1 - 0.027 14.4 0.1 0.055 13.4 0.1 1.5 1 0 0 1 1 1 0 HTH domain Plectin PF00681.20 AID33632.1 - 0.042 13.7 0.0 0.15 11.9 0.0 2.0 1 0 0 1 1 1 0 Plectin repeat TrmB PF01978.19 AID33632.1 - 0.042 13.7 0.0 0.16 11.9 0.0 2.0 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.12 AID33632.1 - 0.054 13.3 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 AID33632.1 - 0.11 12.4 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID33632.1 - 0.14 11.8 0.3 0.35 10.5 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding RepL PF05732.11 AID33632.1 - 0.14 11.5 0.0 0.31 10.5 0.0 1.5 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_AsnC-type PF13404.6 AID33632.1 - 0.26 11.1 2.1 12 5.9 0.5 2.8 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain BcrAD_BadFG PF01869.20 AID33633.1 - 2.3e-46 158.5 1.3 2.5e-46 158.3 1.3 1.0 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.21 AID33633.1 - 0.1 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain SIS_2 PF13580.6 AID33634.1 - 3.2e-12 46.7 3.8 5.8e-12 45.8 3.8 1.5 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 AID33634.1 - 9.4e-11 41.7 2.8 1.8e-10 40.8 0.1 2.8 2 1 1 3 3 3 1 SIS domain UBA_4 PF14555.6 AID33634.1 - 0.13 12.1 0.1 5.3 6.9 0.0 2.4 2 0 0 2 2 2 0 UBA-like domain SBP_bac_8 PF13416.6 AID33635.1 - 2.3e-34 119.5 7.3 2.3e-34 119.5 7.3 1.3 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID33635.1 - 1.3e-30 107.5 12.5 1.8e-30 107.0 12.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID33635.1 - 0.0022 17.5 0.0 1.9 7.8 0.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID33635.1 - 0.0031 17.3 0.0 0.032 14.0 0.0 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 AID33636.1 - 9.8e-14 51.5 17.0 9.8e-14 51.5 17.0 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33637.1 - 1.5e-15 57.5 19.4 1.5e-15 57.5 19.4 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component MFS_Mycoplasma PF07672.13 AID33637.1 - 0.075 12.3 0.2 0.075 12.3 0.2 2.7 2 1 1 3 3 3 0 Mycoplasma MFS transporter GFO_IDH_MocA PF01408.22 AID33638.1 - 7.2e-25 88.2 0.0 1.2e-24 87.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 AID33638.1 - 0.0017 18.5 0.0 0.0075 16.4 0.0 2.0 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 AID33638.1 - 0.01 16.5 0.0 0.022 15.4 0.0 1.5 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Response_reg PF00072.24 AID33638.1 - 0.029 14.5 0.0 0.055 13.6 0.0 1.4 1 0 0 1 1 1 0 Response regulator receiver domain ABC_tran PF00005.27 AID33639.1 - 1.3e-32 113.2 0.0 2e-32 112.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID33639.1 - 7.2e-09 35.7 0.0 2.1e-08 34.2 0.0 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID33639.1 - 6.9e-07 29.4 0.0 0.0011 18.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 AID33639.1 - 1e-06 28.9 0.0 2.3e-06 27.8 0.0 1.6 1 0 0 1 1 1 1 TOBE domain RsgA_GTPase PF03193.16 AID33639.1 - 1.8e-05 24.7 0.2 0.00018 21.4 0.0 2.0 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID33639.1 - 0.0005 20.5 0.1 0.00073 20.0 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain OB_MalK PF17912.1 AID33639.1 - 0.00073 20.3 1.5 0.3 12.0 0.1 3.4 2 1 1 3 3 2 1 MalK OB fold domain AAA_23 PF13476.6 AID33639.1 - 0.0018 18.8 0.0 0.0025 18.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID33639.1 - 0.0022 17.5 0.0 0.14 11.6 0.0 2.6 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain Rad17 PF03215.15 AID33639.1 - 0.0035 17.3 0.0 0.005 16.8 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 AID33639.1 - 0.0041 16.8 0.0 0.017 14.8 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_33 PF13671.6 AID33639.1 - 0.013 15.6 0.2 0.022 15.0 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID33639.1 - 0.014 15.1 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33639.1 - 0.02 14.4 0.1 0.27 10.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID33639.1 - 0.026 14.2 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 AID33639.1 - 0.031 14.6 0.0 0.059 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 AID33639.1 - 0.033 14.1 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 AID33639.1 - 0.037 14.4 0.0 0.077 13.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID33639.1 - 0.042 14.1 0.2 0.095 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID33639.1 - 0.062 13.4 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_5 PF07728.14 AID33639.1 - 0.075 13.0 0.1 0.33 11.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 AID33639.1 - 0.085 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 AID33639.1 - 0.088 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 AID33639.1 - 0.16 11.1 0.0 0.23 10.6 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain FAA_hydrolase PF01557.18 AID33640.1 - 1.4e-72 243.9 0.0 1.7e-72 243.6 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family adh_short_C2 PF13561.6 AID33641.1 - 1e-56 192.1 2.6 1.2e-56 191.9 2.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33641.1 - 3.8e-44 150.5 2.0 4.5e-44 150.2 2.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 AID33641.1 - 1.5e-05 24.6 0.1 3.4e-05 23.4 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 AID33641.1 - 0.002 18.0 0.2 0.0042 17.0 0.2 1.5 1 1 0 1 1 1 1 KR domain ADH_zinc_N PF00107.26 AID33641.1 - 0.018 15.0 0.2 0.033 14.2 0.2 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase AdoHcyase_NAD PF00670.21 AID33641.1 - 0.02 14.9 0.4 0.036 14.1 0.4 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_10 PF13460.6 AID33641.1 - 0.049 13.5 0.3 0.063 13.2 0.3 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Aldedh PF00171.22 AID33642.1 - 1.2e-199 663.6 1.9 6.8e-160 532.6 0.1 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 AID33642.1 - 7.6e-08 32.1 0.0 0.0041 16.6 0.0 2.7 3 0 0 3 3 3 2 Protein of unknown function (DUF1487) DeoC PF01791.9 AID33643.1 - 1.8e-20 73.6 0.0 2.7e-20 73.0 0.0 1.3 1 0 0 1 1 1 1 DeoC/LacD family aldolase 4HFCP_synth PF04476.13 AID33643.1 - 0.0079 15.9 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 1 4-HFC-P synthase ACR_tran PF00873.19 AID33644.1 - 8.9e-301 1000.3 14.8 1e-300 1000.1 14.8 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 AID33644.1 - 5.5e-16 58.4 19.6 8.1e-09 34.8 11.6 2.6 2 0 0 2 2 2 2 MMPL family Biotin_lipoyl_2 PF13533.6 AID33645.1 - 3.9e-18 65.0 4.1 8e-18 64.0 2.1 2.6 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 AID33645.1 - 2.5e-12 47.4 5.7 6.8e-07 29.9 0.3 2.7 2 1 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID33645.1 - 2e-11 43.5 3.0 5.8e-11 42.0 3.0 1.7 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl PF00364.22 AID33645.1 - 0.00011 22.0 0.8 0.00053 19.8 0.2 2.5 3 0 0 3 3 3 1 Biotin-requiring enzyme DUF615 PF04751.14 AID33645.1 - 0.013 15.5 1.5 0.025 14.6 1.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF615) DUF5105 PF17118.5 AID33645.1 - 0.082 12.7 1.2 0.15 11.9 1.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5105) NAD_binding_1 PF00175.21 AID33646.1 - 1.5e-09 38.5 0.0 2.3e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 AID33646.1 - 6.3e-08 32.9 0.0 1.2e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 AID33646.1 - 0.0085 16.2 0.0 0.18 11.9 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain Hydantoinase_A PF01968.18 AID33647.1 - 7.2e-99 330.7 11.8 7.4e-99 330.7 2.8 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 AID33647.1 - 7e-55 185.5 0.2 2e-52 177.5 0.1 2.9 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 AID33647.1 - 4.4e-05 22.3 0.5 0.16 10.6 0.0 2.4 2 0 0 2 2 2 2 MutL protein Hydantoinase_B PF02538.14 AID33648.1 - 6.7e-157 523.0 0.2 7.6e-157 522.8 0.2 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase SBP_bac_3 PF00497.20 AID33649.1 - 1.7e-64 217.3 0.0 2e-64 217.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 AID33649.1 - 0.00035 20.6 0.1 0.0027 17.7 0.1 2.0 1 1 1 2 2 2 1 NMT1/THI5 like Lig_chan-Glu_bd PF10613.9 AID33649.1 - 0.00057 20.1 0.0 0.0024 18.0 0.0 2.0 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site GCV_T PF01571.21 AID33650.1 - 1.2e-74 250.9 0.0 1.5e-74 250.6 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID33650.1 - 3.4e-12 46.1 0.0 7.1e-12 45.1 0.0 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 AID33650.1 - 0.00023 21.3 0.1 0.0018 18.4 0.1 2.1 1 1 1 2 2 2 1 Sarcosine oxidase, gamma subunit family BPD_transp_1 PF00528.22 AID33651.1 - 1.9e-21 76.7 14.6 1.9e-21 76.7 14.6 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component HemY_N PF07219.13 AID33651.1 - 0.085 13.1 0.3 0.085 13.1 0.3 2.8 4 1 0 4 4 4 0 HemY protein N-terminus Wzy_C PF04932.15 AID33651.1 - 7 6.3 15.8 2.6 7.7 3.8 2.1 2 0 0 2 2 2 0 O-Antigen ligase ABC_tran PF00005.27 AID33652.1 - 7.9e-37 126.8 0.0 1.1e-36 126.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 AID33652.1 - 3.9e-15 55.4 0.0 7.5e-15 54.5 0.0 1.5 1 0 0 1 1 1 1 NIL domain AAA_21 PF13304.6 AID33652.1 - 1e-07 32.1 0.9 0.0043 16.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33652.1 - 3.1e-05 23.5 0.4 0.0012 18.3 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID33652.1 - 0.0007 19.9 0.8 0.0079 16.5 0.8 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID33652.1 - 0.0014 19.0 1.1 0.003 17.9 1.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 AID33652.1 - 0.0028 17.6 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 AID33652.1 - 0.0036 17.0 0.1 0.0074 16.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 AID33652.1 - 0.0096 16.0 0.0 0.028 14.5 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 AID33652.1 - 0.06 12.8 0.2 1.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein DUF4427 PF14468.6 AID33652.1 - 0.074 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) AAA_23 PF13476.6 AID33652.1 - 0.082 13.4 0.7 0.15 12.5 0.7 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID33652.1 - 0.088 13.0 0.6 0.64 10.3 0.6 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.6 AID33652.1 - 0.11 12.1 0.3 18 4.8 0.2 2.7 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 AID33652.1 - 0.21 10.4 3.9 3.2 6.4 0.3 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Lipoprotein_9 PF03180.14 AID33653.1 - 4e-92 307.6 0.1 4.6e-92 307.4 0.1 1.0 1 0 0 1 1 1 1 NLPA lipoprotein Phosphonate-bd PF12974.7 AID33653.1 - 0.014 15.0 0.0 0.024 14.2 0.0 1.4 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein MarR PF01047.22 AID33655.1 - 7.1e-15 54.7 0.0 1e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID33655.1 - 1.1e-11 44.4 1.5 6.9e-11 41.9 0.4 2.1 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID33655.1 - 9.1e-06 26.1 0.1 2.3e-05 24.8 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_20 PF12840.7 AID33655.1 - 0.0011 19.0 1.0 0.0062 16.6 0.1 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID33655.1 - 0.0013 18.4 0.3 0.0032 17.3 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 AID33655.1 - 0.0095 15.8 0.0 0.018 14.9 0.0 1.5 1 1 1 2 2 2 1 TFIIE alpha subunit TrmB PF01978.19 AID33655.1 - 0.012 15.5 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 AID33655.1 - 0.016 15.2 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID33655.1 - 0.032 13.8 0.0 0.049 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HxlR PF01638.17 AID33655.1 - 0.043 13.7 0.0 0.06 13.2 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_18 PF12833.7 AID33656.1 - 1.6e-17 63.5 0.3 2e-17 63.2 0.3 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33656.1 - 1.3e-08 34.7 0.0 2e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family Glyco_trans_1_4 PF13692.6 AID33657.1 - 2e-23 83.3 0.0 2.6e-23 82.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 AID33657.1 - 1e-22 80.5 0.0 1.3e-22 80.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID33657.1 - 6e-06 26.6 0.0 9.6e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 HTH_18 PF12833.7 AID33658.1 - 7.4e-09 35.8 0.1 9.1e-09 35.5 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33658.1 - 0.0093 16.1 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family Glyco_tran_WbsX PF14307.6 AID33659.1 - 1.1e-101 340.8 0.0 1.4e-101 340.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase WbsX Glycos_transf_1 PF00534.20 AID33659.1 - 3e-22 78.9 0.0 7.8e-22 77.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID33659.1 - 5.8e-22 78.6 0.0 1.5e-21 77.2 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 AID33659.1 - 1.3e-09 38.3 0.1 3.8e-09 36.8 0.1 1.8 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 AID33659.1 - 6.8e-07 29.9 3.9 8e-07 29.6 1.1 2.5 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 AID33659.1 - 4.7e-06 26.9 0.0 1.4e-05 25.4 0.0 1.9 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_5 PF16994.5 AID33659.1 - 0.17 11.4 0.0 0.57 9.8 0.0 1.8 2 0 0 2 2 2 0 Glycosyl-transferase family 4 RgpF PF05045.12 AID33660.1 - 5.2e-37 127.8 0.0 6.9e-37 127.4 0.0 1.0 1 0 0 1 1 1 1 Rhamnan synthesis protein F Glycos_transf_2 PF00535.26 AID33661.1 - 3.3e-13 49.8 0.0 5.5e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 AID33661.1 - 2.6e-07 30.4 0.2 1.4e-06 28.0 0.2 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 AID33661.1 - 6.5e-07 29.5 0.0 1.1e-06 28.8 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_7C PF02709.14 AID33661.1 - 0.00071 19.2 0.0 0.0014 18.2 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_trans_2_3 PF13632.6 AID33661.1 - 0.1 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Peripla_BP_6 PF13458.6 AID33662.1 - 8.6e-85 285.4 10.8 1.1e-84 285.1 10.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID33662.1 - 5.2e-21 75.0 1.1 7.5e-21 74.5 1.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 AID33662.1 - 3.5e-11 42.8 0.1 5.1e-11 42.3 0.1 1.2 1 0 0 1 1 1 1 Receptor family ligand binding region ABC_tran PF00005.27 AID33663.1 - 1.3e-26 93.7 0.0 1.7e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33663.1 - 5.1e-08 33.1 1.6 0.0045 16.8 0.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID33663.1 - 7.2e-05 23.4 0.0 0.0001 22.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain BCA_ABC_TP_C PF12399.8 AID33663.1 - 0.00019 21.3 0.1 0.0004 20.2 0.1 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_29 PF13555.6 AID33663.1 - 0.0021 17.7 0.0 0.004 16.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID33663.1 - 0.0027 17.5 0.0 0.0035 17.1 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 AID33663.1 - 0.005 16.3 0.0 0.078 12.4 0.0 2.0 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 AID33663.1 - 0.0055 16.3 0.0 0.0088 15.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID33663.1 - 0.0058 16.9 0.0 0.013 15.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 AID33663.1 - 0.013 15.1 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 AID33663.1 - 0.019 14.7 0.3 0.07 12.9 0.0 1.9 2 1 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 AID33663.1 - 0.027 14.2 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase Rad17 PF03215.15 AID33663.1 - 0.049 13.5 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 AID33663.1 - 0.14 12.1 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 AID33664.1 - 8.6e-28 97.6 0.0 1.1e-27 97.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33664.1 - 9.5e-09 35.5 0.1 0.0019 18.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID33664.1 - 0.0045 16.9 0.1 0.0084 16.0 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase SRP54 PF00448.22 AID33664.1 - 0.0098 15.5 0.5 0.021 14.5 0.2 1.6 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_29 PF13555.6 AID33664.1 - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 AID33664.1 - 0.013 14.9 0.0 3.9 6.8 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 AID33664.1 - 0.014 15.4 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 AID33664.1 - 0.023 14.4 0.4 0.062 13.0 0.2 1.7 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 AID33664.1 - 0.024 15.0 0.1 0.036 14.4 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 AID33664.1 - 0.042 14.2 0.4 0.55 10.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 AID33664.1 - 0.058 12.3 0.3 0.091 11.7 0.3 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_15 PF13175.6 AID33664.1 - 0.08 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 AID33664.1 - 0.096 13.1 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID33664.1 - 0.1 13.1 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID33664.1 - 0.14 12.4 0.3 0.97 9.7 0.3 2.1 1 1 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID33665.1 - 2.8e-41 141.5 39.7 3.4e-41 141.2 39.7 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID33666.1 - 1.1e-35 123.1 37.9 1.6e-35 122.6 37.9 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component LprI PF07007.12 AID33667.1 - 2.8e-11 44.0 0.5 3.7e-11 43.6 0.5 1.2 1 0 0 1 1 1 1 Lysozyme inhibitor LprI ApbA_C PF08546.11 AID33668.1 - 3e-26 92.1 0.0 5.4e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 AID33668.1 - 4.1e-25 88.2 0.4 3e-24 85.4 0.4 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 AID33668.1 - 1.2e-05 25.8 1.1 2.4e-05 24.8 0.6 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 AID33668.1 - 0.0064 16.5 0.6 0.03 14.3 0.2 2.1 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 AID33668.1 - 0.048 13.0 0.8 0.048 13.0 0.8 1.7 3 0 0 3 3 3 0 ThiF family UDPG_MGDP_dh_N PF03721.14 AID33668.1 - 0.083 12.5 0.1 0.15 11.6 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMP-binding PF00501.28 AID33669.1 - 1.6e-86 290.5 0.0 2e-86 290.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID33669.1 - 1.9e-16 60.8 0.3 4.9e-16 59.5 0.3 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 AID33669.1 - 0.012 14.5 0.0 0.11 11.3 0.0 2.0 2 0 0 2 2 2 0 GH3 auxin-responsive promoter G_glu_transpept PF01019.21 AID33670.1 - 6.5e-167 556.4 0.0 7.4e-167 556.2 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase BPD_transp_1 PF00528.22 AID33671.1 - 5.9e-14 52.2 25.2 9.6e-13 48.3 25.2 2.2 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33672.1 - 1.6e-09 37.8 20.2 1.6e-09 37.8 20.2 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 AID33673.1 - 2.6e-33 115.4 0.0 4.7e-33 114.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID33673.1 - 3.9e-11 42.9 0.0 1.6e-10 41.0 0.0 2.1 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 AID33673.1 - 1.7e-06 28.1 0.6 0.0076 16.1 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 AID33673.1 - 0.0056 16.3 0.1 0.033 13.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID33673.1 - 0.0064 16.2 0.4 0.024 14.4 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID33673.1 - 0.0067 16.8 0.1 0.012 15.9 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID33673.1 - 0.012 15.4 0.0 0.12 12.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 AID33673.1 - 0.034 13.6 0.1 6.4 6.2 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_5 PF07728.14 AID33673.1 - 0.045 13.8 0.2 0.3 11.1 0.2 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 AID33673.1 - 0.065 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase T2SSE PF00437.20 AID33673.1 - 0.068 12.2 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 AID33673.1 - 0.074 13.2 0.1 0.18 11.9 0.1 1.8 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 AID33673.1 - 0.094 12.1 0.0 5.7 6.3 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID33673.1 - 0.11 12.8 0.3 0.22 11.8 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID33673.1 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 AID33673.1 - 0.14 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 AID33673.1 - 0.14 12.5 0.1 0.39 11.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID33673.1 - 0.16 11.2 0.0 0.35 10.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin MobB PF03205.14 AID33673.1 - 0.17 11.8 0.3 0.81 9.6 0.1 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 AID33673.1 - 0.2 12.1 0.4 1.4 9.4 0.4 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 AID33673.1 - 0.21 11.5 0.4 0.47 10.4 0.1 1.7 2 0 0 2 2 2 0 NACHT domain SBP_bac_8 PF13416.6 AID33674.1 - 4.7e-28 98.8 0.6 6.8e-28 98.3 0.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID33674.1 - 8.3e-16 58.1 0.4 1e-15 57.8 0.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID33674.1 - 5e-14 53.0 3.1 9e-14 52.1 3.1 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID33674.1 - 1.5e-06 28.2 0.0 1.9e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BRCA-2_helical PF09169.10 AID33674.1 - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 BRCA2, helical FCD PF07729.12 AID33675.1 - 1.6e-21 77.0 7.8 2.3e-21 76.5 7.8 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 AID33675.1 - 5e-19 67.7 0.0 1e-18 66.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID33675.1 - 2.1e-06 27.2 0.1 7e-06 25.5 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID33675.1 - 0.00013 21.8 0.1 0.00046 20.1 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 AID33675.1 - 0.00019 21.5 0.0 0.00039 20.6 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 AID33675.1 - 0.00023 21.1 0.0 0.00053 19.9 0.0 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 AID33675.1 - 0.00034 20.4 0.1 0.0012 18.6 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 AID33675.1 - 0.00042 20.6 0.0 0.00085 19.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 AID33675.1 - 0.0007 19.4 0.6 0.0021 17.9 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID33675.1 - 0.0047 17.0 1.0 0.036 14.1 0.0 2.7 3 1 0 3 3 3 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 AID33675.1 - 0.0048 16.7 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_27 PF13463.6 AID33675.1 - 0.0048 17.4 0.0 0.012 16.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain 4HB_MCP_1 PF12729.7 AID33675.1 - 0.0075 15.8 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 Four helix bundle sensory module for signal transduction HTH_AsnC-type PF13404.6 AID33675.1 - 0.013 15.4 0.1 0.037 13.8 0.1 1.9 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_29 PF13551.6 AID33675.1 - 0.015 15.3 0.1 0.06 13.4 0.1 2.0 1 0 0 1 1 1 0 Winged helix-turn helix EAP30 PF04157.16 AID33675.1 - 0.016 14.5 0.2 0.077 12.3 0.0 2.0 2 1 0 2 2 2 0 EAP30/Vps36 family MarR PF01047.22 AID33675.1 - 0.029 14.3 0.0 0.061 13.3 0.0 1.5 1 0 0 1 1 1 0 MarR family RibD_C PF01872.17 AID33678.1 - 7e-12 45.6 0.0 7.6e-12 45.5 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Cupin_2 PF07883.11 AID33679.1 - 0.00032 20.4 0.0 0.00035 20.2 0.0 1.3 1 1 0 1 1 1 1 Cupin domain Acetyltransf_1 PF00583.25 AID33680.1 - 3.4e-16 59.5 0.0 4.2e-16 59.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID33680.1 - 1.6e-15 57.1 0.0 2.1e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID33680.1 - 4.6e-13 49.4 0.0 6.6e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID33680.1 - 1.3e-07 31.7 0.0 4e-07 30.2 0.0 1.8 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID33680.1 - 2.3e-05 24.3 0.0 4.3e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 AID33680.1 - 4.5e-05 23.5 0.0 7.2e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 AID33680.1 - 0.00028 21.1 0.2 0.0006 20.0 0.2 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID33680.1 - 0.0029 17.8 0.0 0.0039 17.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 AID33680.1 - 0.072 12.8 0.1 0.088 12.5 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 AID33680.1 - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase DMT_YdcZ PF04657.13 AID33681.1 - 2.5e-06 27.8 0.1 2.9e-06 27.6 0.1 1.1 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ UPF0016 PF01169.19 AID33681.1 - 0.15 12.4 0.3 0.15 12.4 0.3 2.0 1 1 1 2 2 2 0 Uncharacterized protein family UPF0016 HATPase_c PF02518.26 AID33682.1 - 6.4e-17 62.1 0.0 1.4e-16 61.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 AID33682.1 - 0.017 15.0 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID33682.1 - 0.045 13.8 0.5 0.21 11.6 0.1 2.4 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 AID33682.1 - 0.12 12.8 2.0 0.13 12.7 0.2 2.1 2 0 0 2 2 2 0 HAMP domain Ribonuclease_P PF00825.18 AID33683.1 - 4.9e-23 81.3 1.2 5.8e-23 81.1 1.2 1.0 1 0 0 1 1 1 1 Ribonuclease P YidC_periplas PF14849.6 AID33684.1 - 3.1e-83 279.9 1.3 4e-83 279.6 1.3 1.1 1 0 0 1 1 1 1 YidC periplasmic domain 60KD_IMP PF02096.20 AID33684.1 - 1.4e-57 194.3 10.8 1.4e-57 194.3 10.8 1.7 2 0 0 2 2 2 1 60Kd inner membrane protein Fasciclin PF02469.22 AID33685.1 - 1.2e-32 112.8 0.2 1.5e-32 112.5 0.2 1.1 1 0 0 1 1 1 1 Fasciclin domain MFS_1 PF07690.16 AID33686.1 - 3.4e-59 200.5 44.2 3.4e-59 200.5 44.2 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 AID33686.1 - 1.5e-10 40.5 10.6 1.5e-10 40.5 10.6 2.5 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 AID33686.1 - 1.7e-06 26.9 4.4 1.7e-06 26.9 4.4 3.2 1 1 1 3 3 3 1 MFS/sugar transport protein MFS_3 PF05977.13 AID33686.1 - 4.8e-05 22.0 11.5 4.8e-05 22.0 11.5 2.4 2 0 0 2 2 2 2 Transmembrane secretion effector HlyD_3 PF13437.6 AID33687.1 - 3.5e-21 75.9 7.2 6.7e-15 55.7 0.1 2.8 3 0 0 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 AID33687.1 - 4.8e-18 65.2 8.2 3e-15 56.0 8.2 2.6 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 AID33687.1 - 7.9e-14 51.2 0.4 7.9e-14 51.2 0.4 3.8 4 0 0 4 4 4 1 Biotin-lipoyl like HlyD PF00529.20 AID33687.1 - 2e-06 27.6 2.1 6.3e-06 26.0 2.0 2.0 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS SH3BP5 PF05276.14 AID33687.1 - 0.00028 20.8 7.3 0.3 10.8 4.7 2.1 1 1 1 2 2 2 2 SH3 domain-binding protein 5 (SH3BP5) OEP PF02321.18 AID33687.1 - 0.00072 19.4 13.6 0.00072 19.4 13.6 1.8 2 0 0 2 2 2 1 Outer membrane efflux protein Biotin_lipoyl PF00364.22 AID33687.1 - 0.00078 19.2 0.2 0.016 15.0 0.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme RnfC_N PF13375.6 AID33687.1 - 0.091 12.7 1.6 2 8.4 0.2 2.6 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain DUF824 PF05688.11 AID33687.1 - 0.24 11.2 1.3 0.69 9.8 0.1 2.4 3 0 0 3 3 3 0 Salmonella repeat of unknown function (DUF824) TPR_MLP1_2 PF07926.12 AID33687.1 - 0.62 10.1 8.0 1.4 9.0 8.0 1.5 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein CENP-H PF05837.12 AID33687.1 - 3 8.3 5.4 7.7 7.0 5.0 1.7 1 1 1 2 2 2 0 Centromere protein H (CENP-H) F_actin_bund_C PF18060.1 AID33687.1 - 4 7.6 8.0 0.13 12.4 1.8 1.7 2 0 0 2 2 2 0 F actin bundling C terminal Hexapep PF00132.24 AID33690.1 - 2.4e-12 46.0 5.7 3.4e-10 39.2 1.5 3.5 4 0 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 AID33690.1 - 0.00035 20.2 0.3 0.00035 20.2 0.3 2.2 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Acetyltransf_11 PF13720.6 AID33690.1 - 0.17 12.4 0.1 0.28 11.7 0.1 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MMR_HSR1 PF01926.23 AID33691.1 - 1.8e-20 73.1 0.0 2.6e-20 72.6 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID33691.1 - 2.5e-07 30.7 0.2 0.0015 18.5 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 AID33691.1 - 1.6e-06 27.7 0.0 3.8e-06 26.5 0.0 1.7 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 AID33691.1 - 1.3e-05 24.8 0.0 0.0015 18.1 0.1 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 AID33691.1 - 2.4e-05 24.4 0.1 0.0081 16.2 0.2 2.2 1 1 1 2 2 2 2 Dynamin family cobW PF02492.19 AID33691.1 - 0.00054 19.6 0.1 0.0032 17.1 0.0 1.9 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 AID33691.1 - 0.015 14.3 0.1 0.11 11.5 0.0 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Roc PF08477.13 AID33691.1 - 0.034 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Septin PF00735.18 AID33691.1 - 0.082 12.2 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Septin AAA_29 PF13555.6 AID33691.1 - 0.16 11.7 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain TetR_C_7 PF14246.6 AID33692.1 - 5.2e-33 113.6 0.0 1.3e-32 112.3 0.0 1.7 2 0 0 2 2 2 1 AefR-like transcriptional repressor, C-terminal domain TetR_N PF00440.23 AID33692.1 - 2.9e-21 75.0 0.2 6.3e-21 73.9 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID33692.1 - 0.0001 22.6 0.1 0.00025 21.4 0.1 1.6 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain RRM_1 PF00076.22 AID33692.1 - 0.0057 16.4 0.1 2.3 8.1 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HTH_Tnp_1_2 PF13022.6 AID33692.1 - 0.0072 16.5 0.1 0.013 15.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase PAAR_motif PF05488.13 AID33692.1 - 0.096 12.9 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 PAAR motif Tnp_22_dsRBD PF17490.2 AID33692.1 - 0.15 12.1 0.0 0.32 11.0 0.0 1.5 1 0 0 1 1 1 0 L1 transposable element dsRBD-like domain LacI PF00356.21 AID33692.1 - 0.16 11.8 0.0 0.4 10.5 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HlyD_D23 PF16576.5 AID33693.1 - 5.8e-20 71.4 6.4 1.5e-17 63.6 6.4 2.3 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID33693.1 - 7.6e-20 71.6 12.5 9.2e-15 55.3 0.8 3.1 2 2 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID33693.1 - 5.2e-16 58.2 3.8 3e-15 55.8 0.6 4.6 4 1 0 4 4 4 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID33693.1 - 3.3e-06 26.8 0.1 0.015 15.1 0.0 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme HlyD PF00529.20 AID33693.1 - 4.3e-05 23.3 2.0 5.6e-05 23.0 2.0 1.4 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS DUF4407 PF14362.6 AID33693.1 - 0.0028 17.1 17.0 0.0038 16.6 17.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) OEP PF02321.18 AID33693.1 - 0.0048 16.7 27.2 0.0048 16.7 27.2 1.8 1 1 1 2 2 2 1 Outer membrane efflux protein MscS_porin PF12795.7 AID33693.1 - 0.0081 15.7 24.8 0.012 15.2 24.8 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain Tropomyosin_1 PF12718.7 AID33693.1 - 0.039 14.1 4.3 0.061 13.5 4.3 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF1877 PF08974.10 AID33693.1 - 0.039 14.0 0.5 0.066 13.3 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) HlyD_2 PF12700.7 AID33693.1 - 0.062 12.0 0.0 0.24 10.1 0.0 1.8 2 0 0 2 2 2 0 HlyD family secretion protein PTS_EIIA_1 PF00358.20 AID33693.1 - 0.093 12.5 0.2 2.8 7.7 0.0 3.0 3 0 0 3 3 3 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 zf-ZPR1 PF03367.13 AID33693.1 - 0.3 10.9 0.8 0.51 10.2 0.8 1.3 1 0 0 1 1 1 0 ZPR1 zinc-finger domain Prefoldin_2 PF01920.20 AID33693.1 - 3.3 7.7 7.3 1.3 9.0 1.0 2.9 2 1 1 3 3 3 0 Prefoldin subunit Spc7 PF08317.11 AID33693.1 - 4.4 6.1 11.5 18 4.1 10.7 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein APG6_N PF17675.1 AID33693.1 - 4.4 7.8 10.3 14 6.2 10.4 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 AID33693.1 - 4.9 7.4 7.8 10 6.4 7.8 1.6 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF3584 PF12128.8 AID33693.1 - 5.3 4.4 14.9 7.6 3.9 14.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_27 PF13514.6 AID33693.1 - 7.1 6.2 9.1 0.15 11.6 2.4 1.6 2 0 0 2 2 2 0 AAA domain Tropomyosin PF00261.20 AID33693.1 - 8.3 5.7 11.5 6.7 6.0 5.4 2.0 1 1 1 2 2 2 0 Tropomyosin MFS_1 PF07690.16 AID33694.1 - 1.6e-39 135.9 44.5 1.6e-39 135.9 44.5 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily SHR3_chaperone PF08229.11 AID33694.1 - 0.086 11.8 1.6 0.4 9.6 1.6 2.1 1 0 0 1 1 1 0 ER membrane protein SH3 UL42 PF17638.2 AID33694.1 - 3.7 7.5 6.1 1.3 9.0 0.3 3.0 3 0 0 3 3 3 0 HCMV UL42 SelR PF01641.18 AID33695.1 - 2.5e-48 163.2 0.0 3.1e-48 162.8 0.0 1.1 1 0 0 1 1 1 1 SelR domain UCR_Fe-S_N PF10399.9 AID33695.1 - 1.8e-05 24.0 1.8 3.1e-05 23.2 1.8 1.3 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 AID33695.1 - 0.081 12.8 7.4 0.34 10.8 7.3 2.1 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence zf-Mss51 PF13824.6 AID33695.1 - 0.099 12.8 0.1 0.73 10.0 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Yippee-Mis18 PF03226.14 AID33695.1 - 0.13 12.5 0.1 0.3 11.3 0.1 1.7 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Fasciclin PF02469.22 AID33696.1 - 8.4e-33 113.3 0.1 1.1e-32 113.0 0.1 1.1 1 0 0 1 1 1 1 Fasciclin domain Big_3 PF07523.12 AID33696.1 - 0.026 14.8 0.1 0.06 13.6 0.1 1.5 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) DUF211 PF02680.14 AID33696.1 - 0.048 13.8 0.9 0.086 13.0 0.9 1.5 1 0 0 1 1 1 0 Uncharacterized ArCR, COG1888 RskA PF10099.9 AID33697.1 - 5.7e-30 104.9 15.3 7.3e-30 104.6 15.3 1.1 1 0 0 1 1 1 1 Anti-sigma-K factor rskA Sigma70_r2 PF04542.14 AID33698.1 - 1.6e-16 59.8 0.4 1.6e-16 59.8 0.4 1.6 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID33698.1 - 6e-12 45.1 0.2 1.3e-11 44.0 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID33698.1 - 7.1e-06 25.4 0.2 1.7e-05 24.3 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 AID33698.1 - 9.6e-05 22.6 0.1 0.00022 21.4 0.1 1.6 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID33698.1 - 0.00061 19.9 0.2 0.00061 19.9 0.2 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID33698.1 - 0.001 18.8 0.1 0.0037 17.0 0.1 1.9 2 0 0 2 2 2 1 Homeodomain-like domain DUF1804 PF08822.11 AID33698.1 - 0.027 14.5 0.0 0.048 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) DUF4635 PF15466.6 AID33698.1 - 0.045 13.3 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) HTH_psq PF05225.16 AID33698.1 - 0.15 11.9 0.1 0.44 10.3 0.1 1.9 1 0 0 1 1 1 0 helix-turn-helix, Psq domain Phage_CI_repr PF07022.13 AID33698.1 - 0.15 12.1 0.1 0.88 9.7 0.0 2.1 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain Amidase PF01425.21 AID33699.1 - 5e-80 269.6 1.3 3.3e-78 263.6 1.3 2.3 1 1 0 1 1 1 1 Amidase AA_kinase PF00696.28 AID33700.1 - 6.2e-52 176.6 1.5 7.3e-52 176.4 1.5 1.1 1 0 0 1 1 1 1 Amino acid kinase family B12-binding PF02310.19 AID33701.1 - 3.9e-19 68.9 0.2 1.8e-18 66.7 0.1 2.0 2 0 0 2 2 2 1 B12 binding domain Radical_SAM PF04055.21 AID33701.1 - 2.9e-14 53.8 0.0 1.2e-13 51.8 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 AID33701.1 - 0.24 11.7 0.0 0.68 10.2 0.0 1.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain AsnC_trans_reg PF01037.21 AID33702.1 - 1.3e-21 76.3 0.1 2e-21 75.7 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 AID33702.1 - 8.9e-13 47.8 0.0 1.9e-12 46.8 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 AID33702.1 - 1.2e-12 47.1 0.0 1.9e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 AID33702.1 - 0.0028 17.7 0.0 0.0055 16.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_47 PF16221.5 AID33702.1 - 0.019 14.5 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 winged helix-turn-helix MarR_2 PF12802.7 AID33702.1 - 0.035 14.0 0.1 0.059 13.3 0.1 1.5 1 1 0 1 1 1 0 MarR family HTH_11 PF08279.12 AID33702.1 - 0.089 12.8 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 AID33702.1 - 0.15 12.1 0.0 0.32 11.0 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Glyoxalase PF00903.25 AID33703.1 - 2.2e-05 24.6 0.1 7.7e-05 22.9 0.1 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID33703.1 - 0.0049 17.6 0.0 0.89 10.4 0.1 2.0 1 1 0 2 2 2 2 Glyoxalase-like domain TetR_C_7 PF14246.6 AID33704.1 - 1.1e-27 96.4 0.2 2.2e-27 95.4 0.2 1.5 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain TetR_N PF00440.23 AID33704.1 - 5.4e-17 61.3 1.3 1.2e-16 60.2 0.4 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_11 PF16859.5 AID33704.1 - 2.2e-05 24.7 0.2 4.2e-05 23.8 0.2 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_40 PF14493.6 AID33704.1 - 0.0068 16.8 0.1 0.013 15.9 0.1 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 AID33704.1 - 0.02 15.0 0.0 0.044 13.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase Sigma70_r4_2 PF08281.12 AID33704.1 - 0.044 13.5 0.0 0.099 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 LacI PF00356.21 AID33704.1 - 0.069 13.0 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family CMD PF02627.20 AID33704.1 - 0.071 13.2 0.0 0.22 11.6 0.0 1.8 2 0 0 2 2 2 0 Carboxymuconolactone decarboxylase family HTH_7 PF02796.15 AID33704.1 - 0.12 12.5 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.7 AID33705.1 - 2e-13 50.0 0.8 5.4e-13 48.6 0.8 1.8 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID33705.1 - 1.8e-12 47.0 0.0 1.7e-11 43.8 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 AID33705.1 - 2.9e-06 27.7 0.0 6e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 AID33705.1 - 0.0002 20.9 0.1 0.0011 18.5 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 AID33705.1 - 0.0025 17.6 2.0 0.0034 17.1 0.4 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 AID33705.1 - 0.0065 16.5 0.2 0.014 15.4 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain SelB-wing_2 PF09106.11 AID33705.1 - 0.013 15.7 0.0 0.034 14.4 0.0 1.7 1 0 0 1 1 1 0 Elongation factor SelB, winged helix HTH_Crp_2 PF13545.6 AID33705.1 - 0.02 14.8 2.9 0.024 14.6 0.1 2.5 3 1 0 3 3 3 0 Crp-like helix-turn-helix domain DprA_WH PF17782.1 AID33705.1 - 0.037 14.2 0.5 0.33 11.1 0.3 2.4 2 0 0 2 2 2 0 DprA winged helix domain DUF2313 PF10076.9 AID33705.1 - 0.063 13.1 0.3 0.13 12.1 0.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) HTH_28 PF13518.6 AID33705.1 - 0.17 12.0 0.1 0.17 12.0 0.1 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain Crp PF00325.20 AID33705.1 - 0.73 9.5 4.5 5.9 6.6 0.2 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family FAD_binding_3 PF01494.19 AID33707.1 - 9.3e-31 107.3 0.2 2.3e-30 106.0 0.2 1.6 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.24 AID33707.1 - 4.3e-08 33.1 2.3 0.00043 20.0 1.0 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33707.1 - 2.4e-06 27.7 0.5 6.3e-06 26.3 0.5 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID33707.1 - 5.5e-05 22.5 0.1 0.00016 21.0 0.1 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 AID33707.1 - 0.00092 18.6 0.6 0.65 9.2 0.8 2.3 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 AID33707.1 - 0.0011 18.1 1.3 0.0016 17.6 0.6 1.7 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 AID33707.1 - 0.006 15.7 0.5 0.0078 15.3 0.5 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 AID33707.1 - 0.0062 17.1 0.0 0.05 14.2 0.2 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID33707.1 - 0.0079 14.9 0.0 0.021 13.5 0.3 1.5 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.12 AID33707.1 - 0.0089 15.1 2.3 0.013 14.5 0.3 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 AID33707.1 - 0.017 14.4 0.3 0.041 13.2 0.3 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_Gly3P_dh_N PF01210.23 AID33707.1 - 0.02 14.9 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Trp_halogenase PF04820.14 AID33707.1 - 0.026 13.4 0.2 3.5 6.4 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase 3HCDH_N PF02737.18 AID33707.1 - 0.031 14.1 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SE PF08491.10 AID33707.1 - 0.047 12.7 0.0 0.61 9.1 0.0 2.1 2 0 0 2 2 2 0 Squalene epoxidase Thi4 PF01946.17 AID33707.1 - 0.17 11.1 0.1 0.31 10.3 0.1 1.3 1 0 0 1 1 1 0 Thi4 family Pyr_redox_3 PF13738.6 AID33707.1 - 0.19 10.9 0.1 0.31 10.3 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 AID33707.1 - 0.2 11.3 0.3 0.36 10.5 0.3 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA GMC_oxred_C PF05199.13 AID33708.1 - 2.6e-27 96.1 0.0 4.9e-27 95.2 0.0 1.5 1 0 0 1 1 1 1 GMC oxidoreductase Pyr_redox_2 PF07992.14 AID33708.1 - 6.4e-08 32.2 0.1 0.0012 18.2 0.0 2.9 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID33708.1 - 0.00024 20.8 0.1 0.0076 15.9 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID33708.1 - 0.0003 20.1 0.1 0.00057 19.2 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 AID33708.1 - 0.00049 19.3 0.1 0.22 10.6 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 AID33708.1 - 0.0034 16.8 0.8 0.038 13.4 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33708.1 - 0.0061 16.8 0.1 0.024 14.9 0.1 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 AID33708.1 - 0.012 15.8 0.0 1.1 9.5 0.0 3.4 3 1 0 3 3 3 0 TrkA-N domain Lycopene_cycl PF05834.12 AID33708.1 - 0.043 12.9 0.0 0.08 12.0 0.0 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein 3HCDH_N PF02737.18 AID33708.1 - 0.049 13.5 0.5 1.2 9.0 0.0 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 AID33708.1 - 0.097 11.9 0.0 0.21 10.8 0.1 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID33708.1 - 0.17 11.1 0.0 0.38 9.9 0.0 1.5 1 0 0 1 1 1 0 Thi4 family NAD_Gly3P_dh_N PF01210.23 AID33708.1 - 0.17 11.8 0.1 0.44 10.5 0.0 1.7 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GGDEF PF00990.21 AID33710.1 - 2.5e-37 128.1 0.0 3.6e-37 127.6 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Phage_holin_3_6 PF07332.11 AID33710.1 - 0.17 11.9 2.6 0.34 11.0 2.6 1.5 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Arg_repressor_C PF02863.18 AID33710.1 - 0.68 9.8 3.5 7.1 6.6 0.0 3.1 2 1 1 3 3 3 0 Arginine repressor, C-terminal domain HAD_2 PF13419.6 AID33711.1 - 3.6e-09 36.9 0.0 7.1e-09 36.0 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID33711.1 - 5.5e-07 30.1 0.0 4.4e-05 23.9 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 AID33711.1 - 0.011 15.6 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 Acid Phosphatase Hydrolase_like PF13242.6 AID33711.1 - 0.059 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 HAD-hyrolase-like Lysine_decarbox PF03641.14 AID33712.1 - 2.8e-34 118.0 0.0 2.6e-33 114.9 0.0 2.0 2 0 0 2 2 2 1 Possible lysine decarboxylase LDcluster4 PF18306.1 AID33712.1 - 3.6e-09 36.4 0.0 5.3e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family THDPS_N_2 PF14805.6 AID33713.1 - 1.4e-24 86.1 1.1 2e-24 85.6 1.1 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep_2 PF14602.6 AID33713.1 - 6.1e-11 41.9 1.3 6.1e-11 41.9 1.3 2.9 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 AID33713.1 - 2.4e-10 39.7 7.9 6.2e-06 25.7 0.6 3.3 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) DUF805 PF05656.14 AID33714.1 - 1.3e-23 83.4 1.6 1.5e-23 83.2 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) TauE PF01925.19 AID33714.1 - 0.0085 15.7 4.4 0.0095 15.6 4.4 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Acyl_transf_3 PF01757.22 AID33714.1 - 0.0092 15.1 5.9 0.011 14.9 5.9 1.1 1 0 0 1 1 1 1 Acyltransferase family Intg_mem_TP0381 PF09529.10 AID33714.1 - 0.021 14.4 4.7 0.029 13.9 4.7 1.1 1 0 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) DUF3810 PF12725.7 AID33714.1 - 0.11 11.8 1.0 0.14 11.5 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2892 PF11127.8 AID33714.1 - 0.82 9.7 4.6 0.68 10.0 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF2842 PF11003.8 AID33714.1 - 8.5 6.7 12.4 0.69 10.2 5.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2842) DUF805 PF05656.14 AID33715.1 - 9.5e-21 74.2 1.3 1.1e-20 74.0 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) HEPN_AbiU2 PF18734.1 AID33715.1 - 0.019 14.5 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 AbiU2 DUF2207 PF09972.9 AID33715.1 - 4.9 5.8 4.5 2.2 7.0 2.6 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) ApbA PF02558.16 AID33716.1 - 7e-36 123.2 0.1 1e-35 122.6 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA ApbA_C PF08546.11 AID33716.1 - 3.2e-20 72.6 0.0 4.7e-20 72.0 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal NAD_Gly3P_dh_N PF01210.23 AID33716.1 - 2.1e-06 27.8 0.0 5.5e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 AID33716.1 - 5.4e-05 23.7 0.9 0.00014 22.3 0.9 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 AID33716.1 - 0.0086 15.7 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 AID33716.1 - 0.077 12.4 0.4 3.2 7.1 0.1 2.7 2 1 1 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 AID33716.1 - 0.14 11.4 0.5 0.22 10.7 0.5 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Peptidase_M20 PF01546.28 AID33717.1 - 2.8e-48 164.4 0.1 3.5e-48 164.1 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 AID33717.1 - 4.9e-25 87.6 0.0 7.8e-25 86.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 AID33717.1 - 0.05 13.3 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 Peptidase family M28 DUF2070 PF09843.9 AID33718.1 - 8 4.6 8.3 9.3 4.4 8.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PseudoU_synth_1 PF01416.20 AID33719.1 - 2.4e-38 130.9 0.0 7.3e-28 97.2 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase Acetyltransf_9 PF13527.7 AID33720.1 - 2e-11 44.1 0.0 2.6e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID33720.1 - 2.2e-07 31.2 0.1 3.4e-07 30.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33720.1 - 8e-06 26.1 0.1 1.1e-05 25.6 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID33720.1 - 1.1e-05 25.3 0.0 1.6e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID33720.1 - 0.059 13.5 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Formyl_trans_N PF00551.19 AID33721.1 - 3.7e-38 131.1 0.0 4.8e-38 130.7 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 AID33721.1 - 8.2e-23 80.5 0.0 2.3e-22 79.1 0.0 1.7 2 0 0 2 2 2 1 Formyl transferase, C-terminal domain Glyco_trans_4_4 PF13579.6 AID33721.1 - 0.23 11.9 5.5 0.16 12.4 2.4 2.1 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain Pep_deformylase PF01327.21 AID33722.1 - 4.2e-55 185.7 0.0 4.8e-55 185.5 0.0 1.0 1 0 0 1 1 1 1 Polypeptide deformylase RmuC PF02646.16 AID33723.1 - 1.5e-58 198.3 1.0 1.5e-58 198.3 1.0 1.6 2 0 0 2 2 2 1 RmuC family BLOC1_2 PF10046.9 AID33723.1 - 0.013 15.8 2.1 1.8 8.9 0.6 2.7 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF347 PF03988.12 AID33723.1 - 0.058 13.6 2.1 0.096 12.9 2.1 1.3 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) Fib_alpha PF08702.10 AID33723.1 - 0.061 13.5 3.0 3.1 8.0 0.2 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF948 PF06103.11 AID33723.1 - 0.15 12.4 8.8 9.8 6.5 0.6 3.4 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) HD_4 PF13328.6 AID33723.1 - 0.43 10.3 10.0 0.077 12.7 4.5 2.1 2 0 0 2 2 2 0 HD domain DUF1664 PF07889.12 AID33723.1 - 0.53 10.3 6.1 2.8 8.0 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 AID33723.1 - 1.4 8.5 4.4 0.58 9.7 0.6 2.0 2 0 0 2 2 2 0 fzo-like conserved region Uso1_p115_C PF04871.13 AID33723.1 - 1.7 9.0 4.7 1.2 9.5 0.1 2.4 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region CLZ PF16526.5 AID33723.1 - 4.1 7.8 8.3 19 5.7 0.9 3.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Methyltransf_25 PF13649.6 AID33724.1 - 2.4e-21 76.2 0.0 5.3e-21 75.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID33724.1 - 3.5e-21 75.6 0.0 6.4e-21 74.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID33724.1 - 2.3e-19 69.7 0.0 4e-19 68.9 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 AID33724.1 - 4.7e-14 52.5 0.0 5.5e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID33724.1 - 7.2e-12 45.5 0.0 9.4e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33724.1 - 1.6e-11 44.8 0.0 4.4e-11 43.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain RrnaAD PF00398.20 AID33724.1 - 0.00045 19.4 0.0 0.00059 19.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_16 PF10294.9 AID33724.1 - 0.0015 18.3 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_8 PF05148.15 AID33724.1 - 0.0022 17.9 0.0 0.0035 17.2 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 AID33724.1 - 0.0085 15.7 0.0 0.032 13.8 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase small domain Rsm22 PF09243.10 AID33724.1 - 0.018 14.3 0.0 0.043 13.1 0.0 1.5 2 0 0 2 2 2 0 Mitochondrial small ribosomal subunit Rsm22 NodS PF05401.11 AID33724.1 - 0.032 13.8 0.0 0.42 10.2 0.0 2.0 2 0 0 2 2 2 0 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 AID33724.1 - 0.28 9.7 0.0 0.38 9.2 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase GFA PF04828.14 AID33725.1 - 1e-18 67.5 0.3 1e-18 67.5 0.3 1.4 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme Zn_ribbon_recom PF13408.6 AID33725.1 - 0.14 12.7 0.1 0.14 12.7 0.1 2.3 3 0 0 3 3 3 0 Recombinase zinc beta ribbon domain Cation_efflux PF01545.21 AID33726.1 - 1e-29 103.7 6.5 1.2e-29 103.5 6.5 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 AID33726.1 - 6.1e-06 26.3 0.0 1e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter TMEM169 PF15052.6 AID33726.1 - 0.13 12.3 0.3 15 5.7 0.1 2.4 2 0 0 2 2 2 0 TMEM169 protein family Transglut_core PF01841.19 AID33727.1 - 3.5e-21 75.8 0.2 4.9e-21 75.3 0.2 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 AID33727.1 - 0.16 11.5 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like domain Multi_Drug_Res PF00893.19 AID33730.1 - 3.1e-28 98.3 8.1 3.7e-28 98.0 8.1 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 AID33730.1 - 0.039 14.1 12.2 0.051 13.7 12.2 1.2 1 0 0 1 1 1 0 EamA-like transporter family DUF1358 PF07096.11 AID33730.1 - 0.15 12.1 1.9 0.21 11.6 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) Borrelia_P83 PF05262.11 AID33731.1 - 9.6 4.6 20.3 12 4.2 20.3 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Bac_luciferase PF00296.20 AID33732.1 - 1.8e-38 132.8 0.3 2.8e-35 122.3 0.1 2.0 1 1 1 2 2 2 2 Luciferase-like monooxygenase AI-2E_transport PF01594.16 AID33733.1 - 2.2e-53 181.5 32.4 2.5e-53 181.3 32.4 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF948 PF06103.11 AID33733.1 - 0.68 10.2 0.0 0.68 10.2 0.0 3.0 5 1 0 5 5 5 0 Bacterial protein of unknown function (DUF948) Acetyltransf_2 PF00797.17 AID33734.1 - 1.2e-80 270.8 0.0 1.4e-80 270.5 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase Bac_luciferase PF00296.20 AID33735.1 - 1.9e-41 142.5 3.3 1.3e-40 139.7 3.3 1.9 1 1 0 1 1 1 1 Luciferase-like monooxygenase Inositol_P PF00459.25 AID33736.1 - 4.4e-58 196.9 0.1 5.2e-58 196.7 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family MarR PF01047.22 AID33737.1 - 1.1e-11 44.5 0.4 1.6e-10 40.7 0.0 2.5 3 0 0 3 3 3 1 MarR family MarR_2 PF12802.7 AID33737.1 - 6e-09 35.7 0.9 3.7e-08 33.1 0.2 2.2 1 1 1 2 2 2 1 MarR family HTH_27 PF13463.6 AID33737.1 - 7.5e-07 29.5 0.1 1.3e-06 28.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 AID33737.1 - 0.00016 21.8 0.2 0.0003 20.9 0.0 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 AID33737.1 - 0.014 15.4 1.3 0.17 11.9 0.2 2.3 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain PadR PF03551.14 AID33737.1 - 0.034 14.1 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family POR PF01558.18 AID33737.1 - 0.063 13.3 0.0 0.088 12.9 0.0 1.2 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase AA_synth PF06684.11 AID33738.1 - 1.3e-75 252.8 0.0 1.4e-75 252.6 0.0 1.0 1 0 0 1 1 1 1 Amino acid synthesis GCV_T_C PF08669.11 AID33740.1 - 0.0053 16.6 0.4 0.054 13.4 0.1 2.6 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain YgbA_NO PF11756.8 AID33740.1 - 0.066 13.6 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter Ald_Xan_dh_C2 PF02738.18 AID33741.1 - 1.4e-156 522.2 0.3 1.8e-156 521.8 0.3 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Fer2_2 PF01799.20 AID33741.1 - 6.1e-21 74.2 0.2 1.4e-20 73.1 0.2 1.6 1 0 0 1 1 1 1 [2Fe-2S] binding domain Ald_Xan_dh_C PF01315.22 AID33741.1 - 9.5e-06 25.9 0.0 1.8e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer2 PF00111.27 AID33741.1 - 3.5e-05 23.7 1.2 3.5e-05 23.7 1.2 2.2 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 AID33741.1 - 0.0016 18.4 0.2 0.0032 17.5 0.2 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_5 PF00941.21 AID33742.1 - 6e-45 153.0 0.0 8.2e-45 152.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID33742.1 - 5.5e-17 61.8 1.1 9.6e-17 61.1 1.1 1.4 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Isochorismatase PF00857.20 AID33743.1 - 3.9e-30 105.3 0.0 5.2e-30 104.9 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family CitMHS_2 PF16980.5 AID33744.1 - 2e-191 636.5 21.8 2.3e-191 636.3 21.8 1.0 1 0 0 1 1 1 1 Putative citrate transport CitMHS PF03600.16 AID33744.1 - 8.5e-07 28.5 28.7 8.5e-07 28.5 28.7 2.8 1 1 1 2 2 2 1 Citrate transporter DUF3852 PF12963.7 AID33744.1 - 0.072 13.4 0.4 0.072 13.4 0.4 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3852) DUF4538 PF15061.6 AID33744.1 - 1.4 8.7 4.0 10 5.9 0.2 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4538) ABC_tran PF00005.27 AID33745.1 - 1.1e-30 107.0 0.0 1.6e-30 106.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID33745.1 - 3.5e-09 36.9 0.3 0.0019 18.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID33745.1 - 6.9e-05 23.4 0.1 0.0001 22.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID33745.1 - 0.00017 21.9 0.0 0.00037 20.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID33745.1 - 0.0031 17.0 0.5 0.081 12.3 0.5 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID33745.1 - 0.004 17.6 0.3 0.023 15.1 0.2 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 AID33745.1 - 0.0071 16.0 0.1 0.018 14.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID33745.1 - 0.008 15.9 0.2 0.016 15.0 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID33745.1 - 0.013 15.2 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 AID33745.1 - 0.016 15.4 0.1 0.062 13.5 0.1 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 AID33745.1 - 0.019 14.7 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 AID33745.1 - 0.046 12.5 1.5 0.3 9.8 0.2 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Mg_chelatase PF01078.21 AID33745.1 - 0.1 12.0 0.6 0.46 9.8 0.1 2.0 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 AID33745.1 - 0.14 11.6 0.1 0.23 10.9 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 AID33745.1 - 0.15 12.1 0.1 0.28 11.2 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_13 PF13166.6 AID33745.1 - 0.18 10.4 0.0 0.45 9.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 AID33746.1 - 1.5e-27 96.8 0.0 2e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID33746.1 - 1.2e-09 37.9 0.4 2.5e-09 36.8 0.4 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 AID33746.1 - 4.5e-06 26.7 1.9 0.015 15.1 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33746.1 - 8e-05 22.2 0.1 0.36 10.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID33746.1 - 0.0076 16.6 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID33746.1 - 0.029 14.1 0.0 0.069 12.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP_bind_1 PF03029.17 AID33746.1 - 0.041 13.7 0.1 0.087 12.6 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 AID33746.1 - 0.043 14.3 0.0 0.063 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 AID33746.1 - 0.082 12.5 0.8 0.21 11.2 0.8 1.9 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 AID33746.1 - 0.089 13.1 0.1 0.49 10.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 AID33746.1 - 0.16 12.4 0.0 0.38 11.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 AID33746.1 - 0.21 11.3 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID33746.1 - 0.22 11.4 0.3 0.68 9.8 0.0 2.0 2 1 0 2 2 2 0 NTPase BPD_transp_2 PF02653.16 AID33747.1 - 6e-38 130.5 45.2 8e-38 130.1 45.2 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component RP853 PF17542.2 AID33747.1 - 0.95 8.5 4.4 0.27 10.3 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized RP853 YqjK PF13997.6 AID33747.1 - 1.8 8.9 4.3 1.1 9.6 0.7 2.4 2 0 0 2 2 2 0 YqjK-like protein BPD_transp_2 PF02653.16 AID33748.1 - 1.3e-39 136.0 38.6 1.6e-39 135.7 38.6 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.6 AID33749.1 - 1.5e-47 162.9 3.3 1.8e-47 162.7 3.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 AID33749.1 - 4.1e-14 52.3 0.0 8.7e-14 51.3 0.0 1.5 1 1 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 AID33749.1 - 1.6e-05 24.2 0.0 2.1e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region NAPRTase PF04095.16 AID33752.1 - 8.5e-76 254.7 0.0 1.1e-75 254.4 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 AID33752.1 - 4.6e-27 94.9 0.0 6.8e-27 94.3 0.0 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LysR_substrate PF03466.20 AID33753.1 - 4e-31 108.0 1.9 5.5e-31 107.6 1.9 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID33753.1 - 1.5e-22 79.3 0.7 4.2e-22 77.9 0.7 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family P22_Cro PF14549.6 AID33753.1 - 0.053 13.4 0.1 0.13 12.1 0.1 1.6 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Arginase PF00491.21 AID33754.1 - 7.3e-84 281.6 0.2 9.3e-84 281.2 0.2 1.1 1 0 0 1 1 1 1 Arginase family Pal1 PF08316.11 AID33754.1 - 0.42 11.4 1.4 1.1 10.0 1.2 1.8 2 0 0 2 2 2 0 Pal1 cell morphology protein SBP_bac_3 PF00497.20 AID33756.1 - 2.3e-41 141.7 1.1 2.8e-41 141.4 1.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 BPD_transp_1 PF00528.22 AID33757.1 - 3.3e-20 72.6 13.1 3.3e-20 72.6 13.1 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33758.1 - 2.6e-12 46.9 10.0 2.6e-12 46.9 10.0 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component GyrI-like PF06445.15 AID33759.1 - 2.4e-30 105.9 0.0 3.3e-30 105.4 0.0 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HTH_18 PF12833.7 AID33759.1 - 3.6e-21 75.2 3.3 7.4e-21 74.2 3.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33759.1 - 1.2e-14 54.0 0.1 7.4e-08 32.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cass2 PF14526.6 AID33759.1 - 2.6e-09 37.4 0.0 6.5e-05 23.1 0.0 2.2 1 1 1 2 2 2 2 Integron-associated effector binding protein DLH PF01738.18 AID33760.1 - 2.6e-17 63.1 0.0 3.9e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 AID33760.1 - 1.8e-10 40.7 0.0 2.2e-07 30.6 0.0 2.3 1 1 0 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 AID33760.1 - 2e-10 40.3 0.0 2.4e-05 23.7 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 AID33760.1 - 0.0004 20.1 0.0 0.00051 19.8 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) BAAT_C PF08840.11 AID33760.1 - 0.00048 20.1 0.0 0.033 14.1 0.0 2.1 2 0 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 AID33760.1 - 0.0025 18.5 2.5 0.99 10.0 0.2 2.3 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 AID33760.1 - 0.0027 17.6 0.0 0.022 14.6 0.0 2.1 1 1 1 2 2 2 1 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 AID33760.1 - 0.048 13.2 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) DUF2974 PF11187.8 AID33760.1 - 0.053 13.1 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Sulfotransfer_4 PF17784.1 AID33761.1 - 5.5e-49 166.9 0.1 2e-48 165.1 0.1 1.7 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 AID33761.1 - 0.0037 17.7 0.1 0.004 17.6 0.1 1.3 1 1 0 1 1 1 1 Sulfotransferase family MatE PF01554.18 AID33762.1 - 2.8e-56 189.6 28.5 2.2e-29 102.2 15.3 3.5 3 1 1 4 4 4 2 MatE Polysacc_synt_C PF14667.6 AID33762.1 - 6.3e-08 32.8 26.2 4.9e-07 29.9 12.6 4.5 2 1 2 4 4 4 3 Polysaccharide biosynthesis C-terminal domain HTH_18 PF12833.7 AID33763.1 - 7.5e-23 80.6 0.4 5.1e-22 77.9 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33763.1 - 3e-15 55.8 0.2 1.9e-06 27.8 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family LacI PF00356.21 AID33763.1 - 0.0024 17.6 0.0 0.0041 16.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family TetR_N PF00440.23 AID33763.1 - 0.0089 15.8 0.0 0.018 14.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_31 PF13560.6 AID33763.1 - 0.037 14.4 0.0 0.11 12.8 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 AID33763.1 - 0.062 13.1 0.0 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain UPF0122 PF04297.14 AID33763.1 - 0.17 12.1 0.0 0.28 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like SBP_bac_1 PF01547.25 AID33764.1 - 8e-31 108.1 12.8 1.2e-30 107.6 12.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID33764.1 - 4.7e-26 92.2 4.0 6.2e-26 91.9 4.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Drf_FH1 PF06346.12 AID33764.1 - 0.2 11.4 4.3 0.13 12.0 2.1 1.7 2 0 0 2 2 2 0 Formin Homology Region 1 BPD_transp_1 PF00528.22 AID33765.1 - 5.3e-13 49.1 12.0 5.3e-13 49.1 12.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33766.1 - 6.1e-17 61.9 19.0 6.1e-17 61.9 19.0 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ADH_N PF08240.12 AID33767.1 - 1.7e-23 82.6 0.1 2.8e-23 81.9 0.1 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID33767.1 - 6.9e-18 64.9 0.1 1.4e-17 63.9 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 AID33767.1 - 5.4e-11 43.7 0.1 1.4e-10 42.3 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID33767.1 - 2.2e-10 40.4 0.0 4e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Methyltransf_25 PF13649.6 AID33767.1 - 0.053 14.2 0.1 0.18 12.5 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain HI0933_like PF03486.14 AID33767.1 - 0.36 9.5 1.0 0.48 9.1 1.0 1.1 1 0 0 1 1 1 0 HI0933-like protein ABC_tran PF00005.27 AID33768.1 - 2.5e-31 109.0 0.0 4.1e-31 108.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 AID33768.1 - 1.1e-08 35.8 0.0 3e-08 34.4 0.0 1.8 1 0 0 1 1 1 1 MalK OB fold domain TOBE PF03459.17 AID33768.1 - 1.5e-08 34.8 0.0 1.8e-07 31.4 0.0 2.7 2 1 1 3 3 3 1 TOBE domain AAA_21 PF13304.6 AID33768.1 - 8.2e-08 32.4 0.0 0.0014 18.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 AID33768.1 - 1.3e-05 25.1 0.0 2.4e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase TOBE_2 PF08402.10 AID33768.1 - 5.6e-05 23.2 0.0 0.00074 19.6 0.0 2.4 2 0 0 2 2 2 1 TOBE domain AAA_16 PF13191.6 AID33768.1 - 0.00037 20.9 0.0 0.001 19.5 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 AID33768.1 - 0.0031 17.5 0.0 0.0046 16.9 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 AID33768.1 - 0.0035 16.8 0.0 0.67 9.3 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 AID33768.1 - 0.0064 16.7 0.2 0.022 15.0 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID33768.1 - 0.0079 15.9 0.0 0.02 14.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID33768.1 - 0.012 15.9 0.0 0.037 14.3 0.1 1.7 2 0 0 2 2 1 0 AAA domain AAA PF00004.29 AID33768.1 - 0.018 15.5 0.0 0.078 13.4 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 AID33768.1 - 0.021 14.3 0.0 0.48 9.9 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein AAA_15 PF13175.6 AID33768.1 - 0.03 14.1 0.3 0.5 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 AID33768.1 - 0.032 14.7 0.0 0.053 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain CysA_C_terminal PF17850.1 AID33768.1 - 0.034 14.7 1.2 0.11 13.0 0.0 2.5 3 0 0 3 3 3 0 CysA C-terminal regulatory domain AAA_33 PF13671.6 AID33768.1 - 0.038 14.2 0.3 0.12 12.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 AID33768.1 - 0.06 13.9 0.0 0.11 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 AID33768.1 - 0.073 12.6 0.1 0.48 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID33768.1 - 0.077 12.9 0.1 0.28 11.1 0.0 1.8 2 0 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 AID33768.1 - 0.089 12.7 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 AID33768.1 - 0.12 12.7 0.0 0.3 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 AID33768.1 - 0.14 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 AID33768.1 - 0.19 11.8 0.1 0.44 10.6 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase FGGY_C PF02782.16 AID33769.1 - 9.4e-47 159.3 0.4 1.6e-46 158.6 0.4 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 AID33769.1 - 4.5e-28 98.4 0.0 6.4e-28 98.0 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain HAD_2 PF13419.6 AID33770.1 - 3e-21 76.3 0.0 3.5e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID33770.1 - 6e-11 43.0 0.0 1.3e-09 38.6 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID33770.1 - 2.2e-10 40.4 0.1 3.8e-10 39.7 0.1 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 AID33770.1 - 0.015 15.4 0.0 0.34 11.1 0.0 2.9 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase HAD PF12710.7 AID33770.1 - 0.017 15.5 0.0 0.023 15.1 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Mannitol_dh_C PF08125.13 AID33771.1 - 4.3e-89 298.2 0.0 5.7e-89 297.8 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 AID33771.1 - 1.7e-39 135.4 0.0 2.5e-39 134.9 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain adh_short_C2 PF13561.6 AID33772.1 - 3.3e-59 200.3 5.5 4.5e-59 199.8 5.5 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33772.1 - 2.6e-55 186.9 3.8 3.3e-55 186.6 3.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33772.1 - 4.2e-08 33.3 2.9 6.9e-08 32.6 2.9 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID33772.1 - 0.0017 17.9 0.8 0.0024 17.4 0.8 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID33772.1 - 0.0042 16.5 0.2 0.0059 16.1 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID33772.1 - 0.015 14.3 0.1 0.021 13.8 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family 3HCDH_N PF02737.18 AID33772.1 - 0.033 14.1 0.3 0.054 13.4 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 AID33772.1 - 0.037 14.9 0.1 0.073 13.9 0.1 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold GREB1 PF15782.5 AID33772.1 - 0.18 8.9 0.0 0.23 8.6 0.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer ABC_tran PF00005.27 AID33773.1 - 2.3e-31 109.1 0.0 3.4e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 AID33773.1 - 2.9e-12 46.7 0.3 6.5e-12 45.6 0.1 1.7 2 0 0 2 2 1 1 TOBE domain TOBE_2 PF08402.10 AID33773.1 - 1.2e-10 41.4 0.1 2.5e-10 40.4 0.1 1.5 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID33773.1 - 1.6e-08 34.7 0.0 0.00055 19.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33773.1 - 5.1e-05 22.8 0.3 0.00058 19.4 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID33773.1 - 0.00013 21.9 0.2 0.00031 20.7 0.1 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 AID33773.1 - 0.0004 20.8 0.1 0.00082 19.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID33773.1 - 0.00069 19.4 0.0 0.0022 17.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain OB_MalK PF17912.1 AID33773.1 - 0.0025 18.6 2.3 4.2 8.3 0.1 3.7 2 1 1 3 3 3 1 MalK OB fold domain AAA PF00004.29 AID33773.1 - 0.0028 18.1 0.1 0.0048 17.3 0.1 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 AID33773.1 - 0.004 17.7 0.4 0.0062 17.1 0.4 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33773.1 - 0.0068 16.6 0.3 0.021 15.0 0.3 2.1 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 AID33773.1 - 0.0094 15.7 0.0 0.027 14.2 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID33773.1 - 0.011 16.0 0.0 0.024 14.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33773.1 - 0.023 14.3 0.1 0.062 12.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 AID33773.1 - 0.03 14.0 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 AID33773.1 - 0.037 14.3 0.0 0.056 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID33773.1 - 0.046 13.2 0.0 0.079 12.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 AID33773.1 - 0.056 13.5 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase Rad17 PF03215.15 AID33773.1 - 0.057 13.3 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_5 PF07728.14 AID33773.1 - 0.08 12.9 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 AID33773.1 - 0.08 13.3 0.1 0.21 12.0 0.0 1.6 1 1 0 1 1 1 0 RNA helicase ATPase_2 PF01637.18 AID33773.1 - 0.1 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 AID33773.1 - 0.12 12.3 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain BPD_transp_1 PF00528.22 AID33774.1 - 2.2e-17 63.4 18.0 2.2e-17 63.4 18.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33775.1 - 1.3e-14 54.3 17.4 1.3e-14 54.3 17.4 2.9 1 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component SBP_bac_1 PF01547.25 AID33776.1 - 4.3e-52 178.0 13.9 7e-52 177.3 13.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Enolase_like_N PF18374.1 AID33776.1 - 0.064 12.6 0.1 0.22 10.9 0.1 1.9 1 0 0 1 1 1 0 Enolase N-terminal domain-like Alanine_zipper PF11839.8 AID33776.1 - 0.11 12.9 3.0 0.13 12.6 0.5 2.3 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein LysR_substrate PF03466.20 AID33777.1 - 1e-33 116.5 1.4 1.4e-33 116.0 1.4 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID33777.1 - 6.9e-21 74.0 1.0 1.6e-20 72.8 1.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 AID33777.1 - 0.017 15.2 0.0 0.038 14.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 AID33777.1 - 0.1 12.5 0.2 0.28 11.1 0.2 1.8 1 0 0 1 1 1 0 MarR family T6PP_N PF18572.1 AID33778.1 - 0.096 12.5 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Sugar-bind PF04198.13 AID33779.1 - 1.7e-79 266.6 0.0 2.2e-79 266.2 0.0 1.1 1 0 0 1 1 1 1 Putative sugar-binding domain MarR_2 PF12802.7 AID33779.1 - 6.1e-07 29.2 0.9 7.6e-06 25.7 0.2 2.8 2 1 1 3 3 3 1 MarR family HTH_23 PF13384.6 AID33779.1 - 1.9e-05 24.3 0.2 4e-05 23.3 0.2 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 AID33779.1 - 0.00013 21.9 0.2 0.00054 19.9 0.1 2.1 1 1 1 2 2 2 1 Winged helix-turn helix HTH_24 PF13412.6 AID33779.1 - 0.00079 18.9 0.2 0.0031 17.1 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 AID33779.1 - 0.0008 18.9 0.1 0.0033 16.9 0.0 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 AID33779.1 - 0.00087 19.2 0.0 0.0021 18.0 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_28 PF13518.6 AID33779.1 - 0.0011 19.1 0.0 0.0028 17.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 AID33779.1 - 0.0051 16.5 0.6 0.036 13.8 0.0 2.6 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_3 PF01381.22 AID33779.1 - 0.018 15.1 0.8 0.25 11.4 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix HTH_17 PF12728.7 AID33779.1 - 0.052 13.7 0.0 0.14 12.4 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_10 PF04967.12 AID33779.1 - 0.055 13.3 0.4 0.26 11.1 0.0 2.3 3 0 0 3 3 3 0 HTH DNA binding domain PCI PF01399.27 AID33779.1 - 0.067 13.7 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 PCI domain HTH_36 PF13730.6 AID33779.1 - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain AbiEi_4 PF13338.6 AID33779.1 - 0.16 12.2 0.3 5.4 7.2 0.0 3.2 3 0 0 3 3 3 0 Transcriptional regulator, AbiEi antitoxin HAD_2 PF13419.6 AID33780.1 - 1.2e-19 71.0 0.0 1.5e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID33780.1 - 5.6e-15 56.2 0.1 4.2e-13 50.1 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID33780.1 - 1.1e-08 35.7 0.0 1.7e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID33780.1 - 0.0028 17.7 0.0 0.15 12.2 0.0 2.2 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID33780.1 - 0.0037 17.3 0.1 0.0082 16.2 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Aldolase_II PF00596.21 AID33781.1 - 4e-41 141.0 0.4 5e-41 140.7 0.4 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain cobW PF02492.19 AID33783.1 - 6.1e-12 45.5 0.0 6.8e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 AID33783.1 - 0.00054 20.5 0.0 0.00067 20.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 AID33783.1 - 0.00064 19.7 0.0 0.0014 18.6 0.0 1.5 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 AID33783.1 - 0.00099 19.3 0.0 0.001 19.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID33783.1 - 0.0016 18.8 0.0 0.0016 18.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 AID33783.1 - 0.0019 18.1 0.0 0.0024 17.8 0.0 1.1 1 0 0 1 1 1 1 NTPase RNA_helicase PF00910.22 AID33783.1 - 0.0051 17.2 0.0 0.0071 16.7 0.0 1.2 1 0 0 1 1 1 1 RNA helicase PRK PF00485.18 AID33783.1 - 0.0062 16.3 0.0 0.0071 16.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family CbiA PF01656.23 AID33783.1 - 0.008 16.2 0.0 0.01 15.9 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GTP_EFTU PF00009.27 AID33783.1 - 0.0083 15.7 0.0 0.01 15.4 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain SRP54 PF00448.22 AID33783.1 - 0.011 15.4 0.0 0.012 15.2 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MeaB PF03308.16 AID33783.1 - 0.013 14.5 0.1 0.015 14.2 0.1 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TsaE PF02367.17 AID33783.1 - 0.013 15.5 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE dNK PF01712.19 AID33783.1 - 0.016 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase Zeta_toxin PF06414.12 AID33783.1 - 0.019 14.2 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 AID33783.1 - 0.02 15.4 0.0 0.027 15.0 0.0 1.1 1 0 0 1 1 1 0 ABC transporter MobB PF03205.14 AID33783.1 - 0.025 14.5 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CoaE PF01121.20 AID33783.1 - 0.037 13.7 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Dephospho-CoA kinase ATP_bind_1 PF03029.17 AID33783.1 - 0.043 13.6 0.0 0.054 13.3 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 AID33783.1 - 0.047 14.2 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 AID33783.1 - 0.047 12.9 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain T2SSE PF00437.20 AID33783.1 - 0.075 12.1 0.0 0.095 11.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 AID33783.1 - 0.08 12.8 0.1 0.12 12.3 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 AID33783.1 - 0.091 13.2 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_PrkA PF08298.11 AID33783.1 - 0.091 11.7 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 PrkA AAA domain AAA_22 PF13401.6 AID33783.1 - 0.094 13.0 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID33783.1 - 0.097 12.2 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 AID33783.1 - 0.11 11.4 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain MMR_HSR1 PF01926.23 AID33783.1 - 0.14 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase Cytidylate_kin PF02224.18 AID33783.1 - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Cytidylate kinase Thymidylate_kin PF02223.17 AID33783.1 - 0.19 11.4 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Thymidylate kinase NB-ARC PF00931.22 AID33783.1 - 0.22 10.7 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain DUF3995 PF13160.6 AID33784.1 - 4.2e-29 101.4 11.2 5.2e-29 101.2 11.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3995) DUF4383 PF14325.6 AID33784.1 - 0.24 11.7 0.5 0.24 11.7 0.5 3.4 2 2 1 3 3 3 0 Domain of unknown function (DUF4383) UreF PF01730.16 AID33785.1 - 4.5e-25 88.8 8.6 6.1e-25 88.3 8.6 1.2 1 0 0 1 1 1 1 UreF UreE_C PF05194.12 AID33786.1 - 3.1e-22 78.9 42.8 5.8e-17 62.0 42.8 2.9 1 1 0 1 1 1 1 UreE urease accessory protein, C-terminal domain UreE_N PF02814.15 AID33786.1 - 1.3e-12 47.1 0.3 2.6e-12 46.2 0.3 1.5 1 0 0 1 1 1 1 UreE urease accessory protein, N-terminal domain GST_N_3 PF13417.6 AID33788.1 - 2.2e-12 47.2 0.0 3.8e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 AID33788.1 - 6.8e-10 39.1 0.0 1.2e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID33788.1 - 2.5e-08 34.1 0.0 4.3e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 AID33788.1 - 7.6e-06 25.9 1.0 1.1e-05 25.3 0.2 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 AID33788.1 - 0.00029 21.0 0.0 0.0037 17.4 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 AID33788.1 - 0.0025 18.1 0.0 0.0037 17.6 0.0 1.2 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_C_6 PF17171.4 AID33788.1 - 0.021 14.6 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 AID33788.1 - 0.074 13.8 0.0 0.13 13.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Amidohydro_1 PF01979.20 AID33789.1 - 1.1e-76 258.4 0.2 1.5e-76 257.9 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 AID33789.1 - 8.5e-56 187.5 4.1 1.8e-55 186.4 4.1 1.6 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 AID33789.1 - 1.8e-11 44.2 0.3 1.4e-07 31.4 0.0 2.5 2 0 0 2 2 2 2 Amidohydrolase family DUF421 PF04239.12 AID33790.1 - 0.026 14.3 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF421) DUF1180 PF06679.12 AID33790.1 - 1.1 9.7 6.6 1.3 9.4 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) FAP PF07174.11 AID33790.1 - 1.9 7.9 12.7 1.4 8.3 11.7 1.3 1 1 0 1 1 1 0 Fibronectin-attachment protein (FAP) Urease_beta PF00699.20 AID33792.1 - 5.8e-46 154.5 0.0 6.4e-46 154.4 0.0 1.0 1 0 0 1 1 1 1 Urease beta subunit HupE_UreJ PF04955.12 AID33793.1 - 3.9e-60 202.4 34.6 4.9e-60 202.1 34.6 1.0 1 0 0 1 1 1 1 HupE / UreJ protein HupE_UreJ_2 PF13795.6 AID33793.1 - 6.1e-05 22.7 6.0 0.0001 22.0 5.9 1.4 1 1 0 1 1 1 1 HupE / UreJ protein DUF1272 PF06906.11 AID33794.1 - 3e-30 104.1 11.7 3.9e-30 103.7 11.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) zf_Rg PF17915.1 AID33794.1 - 0.013 14.9 1.5 0.013 14.9 1.5 2.4 2 2 0 2 2 2 0 Reverse gyrase zinc finger zf-RING_4 PF14570.6 AID33794.1 - 0.038 13.8 13.3 0.051 13.4 13.3 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF983 PF06170.12 AID33794.1 - 6.8 7.2 6.7 63 4.1 4.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF983) Urease_gamma PF00547.18 AID33795.1 - 3.7e-46 155.5 1.0 4.1e-46 155.3 1.0 1.0 1 0 0 1 1 1 1 Urease, gamma subunit UreD PF01774.17 AID33796.1 - 5.6e-42 144.1 1.1 6.6e-42 143.8 1.1 1.1 1 0 0 1 1 1 1 UreD urease accessory protein PP-binding PF00550.25 AID33797.1 - 1.2e-09 38.3 0.1 1.5e-09 38.0 0.1 1.4 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 AID33797.1 - 0.00011 22.3 0.7 0.00019 21.6 0.7 1.4 1 1 0 1 1 1 1 Acyl-carrier ketoacyl-synt PF00109.26 AID33798.1 - 4.9e-54 183.6 2.1 8.4e-54 182.8 0.8 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID33798.1 - 1.1e-36 125.4 0.3 2.5e-36 124.3 0.3 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 AID33798.1 - 1.5e-06 27.8 2.0 1e-05 25.0 0.9 2.3 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III_C PF08541.10 AID33798.1 - 0.086 13.0 3.0 7.7 6.8 0.0 3.8 3 1 0 4 4 4 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Thiolase_C PF02803.18 AID33798.1 - 0.086 12.5 1.0 1.6 8.4 0.1 2.8 2 1 0 2 2 2 0 Thiolase, C-terminal domain ACP_syn_III PF08545.10 AID33798.1 - 0.18 11.7 1.2 4.8 7.1 0.1 2.7 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GST_N PF02798.20 AID33799.1 - 7.9e-13 48.6 0.0 1.2e-12 48.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 AID33799.1 - 4.2e-11 43.1 0.0 6.9e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 AID33799.1 - 3.9e-10 39.9 0.0 7e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 AID33799.1 - 7.3e-09 35.7 0.0 1.2e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 AID33799.1 - 8.2e-07 29.1 0.0 1.3e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 AID33799.1 - 9.1e-07 28.8 1.0 1.1e-06 28.5 0.2 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain PRK PF00485.18 AID33801.1 - 3.5e-10 39.9 0.0 5.8e-10 39.2 0.0 1.3 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 AID33801.1 - 1.7e-05 25.3 0.0 0.00011 22.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33801.1 - 9.6e-05 22.6 0.0 0.00034 20.8 0.0 1.9 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 AID33801.1 - 0.00072 18.6 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_17 PF13207.6 AID33801.1 - 0.0014 19.1 0.2 1.9 8.9 0.1 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 AID33801.1 - 0.0058 17.0 0.0 0.0089 16.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 AID33801.1 - 0.0074 15.5 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain Mg_chelatase PF01078.21 AID33801.1 - 0.0095 15.3 0.1 0.016 14.6 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 AID33801.1 - 0.019 15.5 0.0 0.044 14.3 0.0 1.5 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 AID33801.1 - 0.025 13.9 0.0 0.041 13.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 AID33801.1 - 0.025 14.8 0.0 0.045 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID33801.1 - 0.027 14.7 0.0 0.051 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID33801.1 - 0.028 14.1 0.0 0.046 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID33801.1 - 0.03 14.1 0.0 0.058 13.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain CbiA PF01656.23 AID33801.1 - 0.035 14.2 0.0 0.05 13.7 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_5 PF07728.14 AID33801.1 - 0.042 13.9 0.0 0.076 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 AID33801.1 - 0.044 13.7 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 NACHT domain ATP_bind_1 PF03029.17 AID33801.1 - 0.062 13.1 0.0 0.091 12.5 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein KTI12 PF08433.10 AID33801.1 - 0.076 12.4 0.0 0.2 11.1 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 NTPase_1 PF03266.15 AID33801.1 - 0.081 12.8 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 NTPase APS_kinase PF01583.20 AID33801.1 - 0.14 12.1 0.0 0.31 10.9 0.0 1.6 2 0 0 2 2 1 0 Adenylylsulphate kinase KAP_NTPase PF07693.14 AID33801.1 - 0.14 11.3 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_25 PF13481.6 AID33801.1 - 0.22 11.1 0.9 0.5 9.9 0.1 1.9 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID33801.1 - 0.23 11.5 0.0 0.41 10.7 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase Aldose_epim PF01263.20 AID33802.1 - 0.22 10.8 0.0 0.36 10.1 0.0 1.2 1 0 0 1 1 1 0 Aldose 1-epimerase DUF812 PF05667.11 AID33804.1 - 0.0011 17.9 12.1 0.0016 17.5 12.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) UPF0242 PF06785.11 AID33804.1 - 0.0011 19.1 4.3 0.002 18.3 4.3 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus ISG65-75 PF11727.8 AID33804.1 - 0.015 14.6 10.8 0.023 14.0 10.8 1.2 1 0 0 1 1 1 0 Invariant surface glycoprotein MMU163 PF17119.5 AID33804.1 - 0.045 12.9 3.8 0.071 12.3 3.8 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Spc7 PF08317.11 AID33804.1 - 0.071 12.0 14.1 0.1 11.4 14.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein MCPsignal PF00015.21 AID33804.1 - 0.072 12.9 24.1 0.071 12.9 15.5 2.5 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain AIP3 PF03915.13 AID33804.1 - 0.098 11.7 12.0 0.14 11.2 12.0 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 Lin-8 PF03353.15 AID33804.1 - 0.11 12.0 12.0 0.18 11.3 12.0 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist AAA_13 PF13166.6 AID33804.1 - 0.12 11.0 10.0 0.16 10.6 10.0 1.1 1 0 0 1 1 1 0 AAA domain TMPIT PF07851.13 AID33804.1 - 0.15 11.3 12.9 0.22 10.7 12.9 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF3584 PF12128.8 AID33804.1 - 0.18 9.3 12.8 0.29 8.6 12.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DDHD PF02862.17 AID33804.1 - 0.19 11.9 2.8 0.28 11.3 2.8 1.3 1 0 0 1 1 1 0 DDHD domain DUF1664 PF07889.12 AID33804.1 - 0.29 11.2 15.2 0.97 9.5 4.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Pex19 PF04614.12 AID33804.1 - 0.34 10.6 10.9 0.54 10.0 10.9 1.2 1 0 0 1 1 1 0 Pex19 protein family Atg14 PF10186.9 AID33804.1 - 0.4 9.7 7.4 0.75 8.8 7.4 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ATG16 PF08614.11 AID33804.1 - 0.53 10.5 16.0 0.95 9.7 16.0 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF3450 PF11932.8 AID33804.1 - 0.74 9.1 28.7 0.085 12.1 20.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) CENP-H PF05837.12 AID33804.1 - 0.8 10.1 14.2 1.8 9.0 14.2 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Tweety PF04906.13 AID33804.1 - 0.94 8.1 8.2 1.6 7.3 8.2 1.3 1 0 0 1 1 1 0 Tweety GBP_C PF02841.14 AID33804.1 - 1.1 8.5 18.0 1.8 7.9 18.0 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain PvlArgDC PF01862.16 AID33804.1 - 1.2 9.0 7.9 1 9.2 5.4 1.9 1 1 1 2 2 2 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Syntaxin-6_N PF09177.11 AID33804.1 - 1.5 9.4 9.6 4.4 7.9 5.9 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Muted PF14942.6 AID33804.1 - 1.6 9.1 11.1 3.2 8.1 11.1 1.5 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein V_ATPase_I PF01496.19 AID33804.1 - 1.7 6.5 10.2 2.3 6.0 10.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Nup54 PF13874.6 AID33804.1 - 2.3 8.3 18.6 2.1 8.4 7.8 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Ndc1_Nup PF09531.10 AID33804.1 - 3.6 6.2 8.1 5.5 5.6 8.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup SKA1 PF07160.12 AID33804.1 - 3.6 7.4 13.2 5.6 6.7 13.2 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 Laminin_I PF06008.14 AID33804.1 - 3.7 7.2 22.1 5.9 6.5 17.5 2.2 1 1 1 2 2 2 0 Laminin Domain I DUF4164 PF13747.6 AID33804.1 - 5.7 7.3 10.3 18 5.7 7.1 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) PIEZO PF15917.5 AID33804.1 - 5.8 6.3 12.4 11 5.4 12.4 1.5 1 0 0 1 1 1 0 Piezo Sec34 PF04136.15 AID33804.1 - 6.6 6.6 14.4 5.1 7.0 8.2 2.4 1 1 1 2 2 2 0 Sec34-like family FlaC_arch PF05377.11 AID33804.1 - 9.1 6.8 8.1 7.1 7.1 2.3 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Peptidase_S11 PF00768.20 AID33805.1 - 6.7e-56 189.4 0.0 8.4e-56 189.1 0.0 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 AID33805.1 - 2e-09 37.4 0.0 2.3e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S13 PF02113.15 AID33805.1 - 0.045 12.5 0.1 0.23 10.1 0.0 1.9 2 0 0 2 2 2 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family DUF1381 PF07129.11 AID33805.1 - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) DUF1003 PF06210.11 AID33806.1 - 2.5e-35 120.7 0.1 5.6e-35 119.6 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1003) DUF2207 PF09972.9 AID33806.1 - 0.12 11.1 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CREPT PF16566.5 AID33806.1 - 0.96 9.6 7.6 0.14 12.3 1.8 2.1 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Peripla_BP_3 PF13377.6 AID33808.1 - 3.9e-28 98.8 0.6 2.6e-27 96.2 0.2 2.5 2 1 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID33808.1 - 2e-19 70.1 0.0 1.1e-18 67.7 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID33808.1 - 2e-14 53.1 0.0 4.3e-14 52.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID33808.1 - 1.2e-08 34.9 0.0 3.6e-08 33.3 0.0 2.1 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_23 PF13384.6 AID33808.1 - 0.02 14.7 0.1 2.1 8.2 0.0 3.0 3 0 0 3 3 3 0 Homeodomain-like domain HTH_AsnC-type PF13404.6 AID33808.1 - 0.024 14.4 0.5 0.12 12.2 0.1 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain TetR_N PF00440.23 AID33808.1 - 0.057 13.2 0.0 0.21 11.4 0.0 2.0 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family MarR_2 PF12802.7 AID33808.1 - 0.059 13.3 0.2 0.81 9.6 0.1 2.4 1 1 1 2 2 2 0 MarR family HTH_AraC PF00165.23 AID33808.1 - 0.073 13.2 0.0 6.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_3 PF01381.22 AID33808.1 - 0.1 12.6 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix PRIMA1 PF16101.5 AID33808.1 - 9.4 6.3 6.6 25 4.9 6.6 1.7 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 Peripla_BP_4 PF13407.6 AID33809.1 - 4.2e-52 177.3 6.6 5.4e-52 176.9 6.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 AID33809.1 - 0.0027 18.0 0.0 0.0065 16.8 0.0 1.7 1 0 0 1 1 1 1 Periplasmic binding protein-like domain ABC_tran PF00005.27 AID33811.1 - 4.7e-48 163.2 0.1 1.5e-28 100.0 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID33811.1 - 1e-11 45.2 0.9 0.002 18.0 0.1 3.1 2 1 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system ACT_7 PF13840.6 AID33811.1 - 0.0012 18.5 0.1 0.8 9.5 0.0 2.9 2 0 0 2 2 2 1 ACT domain AAA_29 PF13555.6 AID33811.1 - 0.0023 17.6 0.5 0.0083 15.8 0.3 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID33811.1 - 0.0076 16.0 6.0 0.28 10.9 2.2 3.2 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 AID33811.1 - 0.01 16.3 0.1 0.017 15.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID33811.1 - 0.061 13.2 0.6 0.16 11.8 0.2 1.9 2 0 0 2 2 2 0 RsgA GTPase AAA_33 PF13671.6 AID33811.1 - 0.071 13.3 0.2 0.42 10.8 0.1 2.3 2 1 0 2 2 2 0 AAA domain MukB PF04310.12 AID33811.1 - 0.078 12.8 0.2 0.15 11.9 0.2 1.4 1 0 0 1 1 1 0 MukB N-terminal TsaE PF02367.17 AID33811.1 - 0.079 13.0 0.3 3.5 7.7 0.1 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMC_N PF02463.19 AID33811.1 - 0.08 12.4 2.3 4.7 6.6 0.1 2.5 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID33811.1 - 0.1 12.8 1.0 13 6.1 0.1 3.1 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 AID33811.1 - 0.2 11.3 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain ABC_ATPase PF09818.9 AID33811.1 - 0.22 10.3 8.8 4.8 5.9 0.6 3.6 3 1 0 3 3 3 0 Predicted ATPase of the ABC class Zeta_toxin PF06414.12 AID33811.1 - 0.32 10.2 1.4 1.1 8.4 0.2 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 AID33811.1 - 0.65 10.3 5.1 3.7 7.8 0.5 3.2 3 0 0 3 3 3 0 AAA domain BPD_transp_2 PF02653.16 AID33812.1 - 2.1e-48 164.8 34.6 2.1e-48 164.8 34.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component CorA PF01544.18 AID33812.1 - 4 6.7 5.4 2.8 7.2 0.4 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein adh_short_C2 PF13561.6 AID33813.1 - 2e-58 197.8 5.8 2.2e-58 197.6 5.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33813.1 - 1.1e-47 162.1 3.8 1.4e-47 161.7 3.8 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33813.1 - 2.5e-06 27.5 2.2 4.7e-06 26.6 2.2 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID33813.1 - 4.7e-06 26.2 0.7 1.2e-05 24.9 0.6 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Sacchrp_dh_NADP PF03435.18 AID33813.1 - 0.0007 19.9 0.9 0.0012 19.1 0.9 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Ldh_1_N PF00056.23 AID33813.1 - 0.0009 19.3 0.9 0.0014 18.7 0.9 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 AID33813.1 - 0.0054 15.9 0.0 0.0076 15.4 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 AID33813.1 - 0.007 15.5 0.5 0.02 14.0 0.2 1.8 2 0 0 2 2 2 1 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 AID33813.1 - 0.0071 15.8 0.0 0.015 14.7 0.0 1.5 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 AID33813.1 - 0.017 15.3 0.2 0.031 14.5 0.2 1.5 1 0 0 1 1 1 0 TrkA-N domain 3HCDH_N PF02737.18 AID33813.1 - 0.019 14.8 1.0 0.029 14.2 1.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID33813.1 - 0.041 13.2 0.4 0.075 12.4 0.2 1.5 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID33813.1 - 0.055 14.0 1.0 0.11 13.1 1.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3Beta_HSD PF01073.19 AID33813.1 - 0.057 12.4 0.1 0.095 11.7 0.1 1.4 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Shikimate_DH PF01488.20 AID33813.1 - 0.096 12.8 0.3 0.15 12.1 0.3 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_3 PF03447.16 AID33813.1 - 0.1 13.3 0.3 0.17 12.6 0.3 1.3 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Hydrolase_4 PF12146.8 AID33813.1 - 0.13 11.5 0.1 0.21 10.8 0.1 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 NmrA PF05368.13 AID33813.1 - 0.49 9.9 2.3 1.2 8.6 2.3 1.7 1 1 0 1 1 1 0 NmrA-like family adh_short_C2 PF13561.6 AID33814.1 - 3.1e-17 62.9 0.2 4.5e-17 62.4 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33814.1 - 4.3e-05 23.1 0.1 6.5e-05 22.5 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Aldose_epim PF01263.20 AID33815.1 - 4.6e-24 85.3 0.0 5.1e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase RgpF PF05045.12 AID33816.1 - 1.6e-12 47.0 0.0 4.6e-12 45.5 0.0 1.6 1 1 0 1 1 1 1 Rhamnan synthesis protein F Methyltransf_23 PF13489.6 AID33818.1 - 1.9e-08 34.4 0.0 0.00048 20.0 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 AID33818.1 - 9.5e-06 26.3 0.0 0.016 15.9 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_11 PF08241.12 AID33818.1 - 1.9e-05 25.2 0.0 0.00027 21.5 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.11 AID33818.1 - 0.0016 17.4 0.0 0.0027 16.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_31 PF13847.6 AID33818.1 - 0.0039 17.0 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 AID33818.1 - 0.04 14.6 0.0 5.9 7.7 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 AID33819.1 - 3.2e-05 24.5 0.0 5.6e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID33819.1 - 0.00076 19.4 0.0 0.002 18.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID33819.1 - 0.033 14.9 0.0 0.11 13.2 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 AID33819.1 - 0.11 13.2 0.0 0.22 12.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain adh_short_C2 PF13561.6 AID33820.1 - 8.1e-60 202.3 6.0 9.2e-60 202.1 6.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33820.1 - 1e-52 178.5 1.2 1.3e-52 178.1 1.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33820.1 - 3.9e-09 36.7 0.6 1.3e-08 35.0 0.6 1.8 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID33820.1 - 1.3e-06 28.0 0.3 2.3e-06 27.3 0.3 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 AID33820.1 - 0.016 15.2 0.7 0.032 14.2 0.1 1.8 2 0 0 2 2 2 0 Zinc-binding dehydrogenase ABC_tran PF00005.27 AID33821.1 - 9.5e-49 165.4 0.0 1.2e-27 97.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID33821.1 - 2.8e-11 43.8 0.4 0.0009 19.1 0.0 3.1 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID33821.1 - 0.00063 19.4 0.7 0.0091 15.7 0.1 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 AID33821.1 - 0.0026 18.0 0.2 6 7.2 0.0 3.6 3 1 0 3 3 3 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 AID33821.1 - 0.0026 17.2 0.0 3.7 6.9 0.0 3.3 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID33821.1 - 0.0041 17.0 3.1 0.014 15.3 0.1 3.0 4 0 0 4 4 4 1 RsgA GTPase AAA_23 PF13476.6 AID33821.1 - 0.021 15.3 0.1 0.032 14.7 0.1 1.2 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID33821.1 - 0.066 12.5 1.1 0.77 9.0 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin AAA PF00004.29 AID33821.1 - 0.072 13.5 0.1 4.3 7.8 0.1 3.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 AID33821.1 - 0.14 12.2 0.4 9.5 6.2 0.1 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 AID33821.1 - 0.2 11.4 0.6 41 3.9 0.1 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein Peripla_BP_4 PF13407.6 AID33822.1 - 1.7e-29 103.2 4.7 2.1e-29 102.9 4.7 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain OMPdecase PF00215.24 AID33822.1 - 0.015 14.9 0.6 0.025 14.2 0.6 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Peripla_BP_3 PF13377.6 AID33825.1 - 4.5e-33 114.9 0.5 1.4e-31 110.0 0.3 2.2 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID33825.1 - 2.7e-18 66.4 0.0 4e-18 65.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID33825.1 - 4.9e-14 51.8 0.1 9.9e-14 50.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID33825.1 - 4.7e-09 36.2 0.0 7.9e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_38 PF13936.6 AID33825.1 - 0.0011 18.6 0.0 0.0034 17.1 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID33825.1 - 0.0013 18.4 0.1 0.029 14.2 0.0 2.9 4 0 0 4 4 4 1 Homeodomain-like domain HTH_24 PF13412.6 AID33825.1 - 0.014 14.9 0.0 0.053 13.1 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding GntR PF00392.21 AID33825.1 - 0.02 14.5 0.2 0.19 11.4 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 AID33825.1 - 0.035 13.9 0.0 0.088 12.6 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_3 PF01381.22 AID33825.1 - 0.061 13.4 0.0 0.41 10.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix MarR PF01047.22 AID33825.1 - 0.099 12.6 0.0 0.53 10.3 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_IclR PF09339.10 AID33825.1 - 0.1 12.4 0.0 0.31 10.9 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain TetR_N PF00440.23 AID33825.1 - 0.12 12.1 0.0 0.43 10.4 0.0 1.9 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_Crp_2 PF13545.6 AID33825.1 - 0.14 12.1 0.0 0.52 10.3 0.0 2.0 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 AID33825.1 - 0.23 11.3 0.1 0.23 11.3 0.1 2.0 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain HTH_31 PF13560.6 AID33825.1 - 0.92 9.9 3.6 2.8 8.4 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain MR_MLE_C PF13378.6 AID33826.1 - 5e-50 170.1 0.1 7.2e-50 169.6 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID33826.1 - 1.7e-17 63.7 0.0 3.7e-17 62.6 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Transket_pyr PF02779.24 AID33827.1 - 3.7e-30 104.9 0.0 7.4e-30 103.9 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID33827.1 - 3.7e-27 94.7 0.2 6.6e-27 93.9 0.2 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 AID33827.1 - 4.3e-09 36.6 0.0 8.2e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_N PF00456.21 AID33828.1 - 4.6e-39 134.3 0.1 9.9e-39 133.2 0.1 1.5 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 AID33828.1 - 0.07 12.3 0.1 6.5 5.9 0.1 2.8 3 0 0 3 3 3 0 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 AID33828.1 - 0.12 11.3 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component adh_short_C2 PF13561.6 AID33829.1 - 7.2e-58 195.9 3.0 1.2e-57 195.2 3.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33829.1 - 9.4e-54 181.8 1.1 1.1e-53 181.6 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33829.1 - 5.1e-07 29.8 0.3 7.6e-07 29.2 0.3 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 AID33829.1 - 0.0081 16.1 0.4 0.019 14.8 0.4 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF2593 PF10767.9 AID33829.1 - 0.047 13.8 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2593) Epimerase PF01370.21 AID33829.1 - 0.11 11.9 0.2 0.19 11.1 0.2 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family DUF4345 PF14248.6 AID33829.1 - 0.22 11.4 2.1 11 6.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4345) MR_MLE_C PF13378.6 AID33830.1 - 3e-55 187.2 0.2 4.9e-55 186.5 0.2 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 AID33830.1 - 2.2e-13 50.4 0.0 5.3e-13 49.2 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E1_dh PF00676.20 AID33831.1 - 1.3e-84 283.7 0.0 8.6e-84 281.0 0.0 2.1 2 1 0 2 2 2 1 Dehydrogenase E1 component Transket_pyr PF02779.24 AID33831.1 - 1.1e-37 129.5 0.3 1.8e-37 128.7 0.3 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID33831.1 - 1.4e-36 125.1 0.2 3e-36 124.0 0.2 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Biotin_lipoyl PF00364.22 AID33831.1 - 5.1e-16 58.3 1.5 1.1e-15 57.1 1.5 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme TPP_enzyme_C PF02775.21 AID33831.1 - 1.4e-05 24.9 4.0 0.00011 22.0 2.6 3.0 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RnfC_N PF13375.6 AID33831.1 - 0.00016 21.6 0.0 0.00045 20.1 0.0 1.7 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 AID33831.1 - 0.00046 20.0 0.4 0.028 14.2 0.0 2.5 2 0 0 2 2 2 1 Biotin-lipoyl like GCV_H PF01597.19 AID33831.1 - 0.0016 18.3 0.3 0.0038 17.1 0.3 1.5 1 0 0 1 1 1 1 Glycine cleavage H-protein DXP_synthase_N PF13292.6 AID33831.1 - 0.0016 17.7 0.1 0.0029 16.9 0.1 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase PFOR_II PF17147.4 AID33831.1 - 0.017 15.4 0.0 0.046 14.0 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Syntaxin PF00804.25 AID33831.1 - 0.18 11.4 0.0 0.3 10.7 0.0 1.2 1 0 0 1 1 1 0 Syntaxin 2-Hacid_dh_C PF02826.19 AID33832.1 - 6.3e-49 165.7 0.0 8.3e-49 165.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID33832.1 - 8.7e-16 57.8 0.0 1.1e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 AID33832.1 - 0.00027 21.1 0.0 0.00045 20.4 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 AID33832.1 - 0.12 12.8 0.0 0.22 12.0 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding E3_binding PF02817.17 AID33833.1 - 6.3e-11 42.4 0.2 6.3e-11 42.4 0.2 2.0 2 0 0 2 2 2 1 e3 binding domain 2-oxoacid_dh PF00198.23 AID33833.1 - 0.013 15.0 0.0 0.026 14.0 0.0 1.5 1 0 0 1 1 1 0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UTRA PF07702.13 AID33834.1 - 2.2e-18 66.5 0.1 4e-18 65.6 0.1 1.4 2 0 0 2 2 2 1 UTRA domain GntR PF00392.21 AID33834.1 - 1.1e-15 57.0 0.2 2.3e-15 56.0 0.1 1.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 AID33834.1 - 0.00015 21.3 0.0 0.00039 19.9 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 AID33834.1 - 0.00016 21.4 0.1 0.002 17.8 0.0 2.3 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain EutK_C PF16365.5 AID33834.1 - 0.00017 21.5 0.0 0.0022 18.0 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilization protein EutK C-terminus HTH_Crp_2 PF13545.6 AID33834.1 - 0.00067 19.6 0.0 0.0019 18.1 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 AID33834.1 - 0.002 18.0 0.1 0.0049 16.7 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 AID33834.1 - 0.0022 18.1 0.1 0.008 16.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain FaeA PF04703.12 AID33834.1 - 0.003 17.9 0.0 0.0081 16.5 0.0 1.7 1 0 0 1 1 1 1 FaeA-like protein HTH_11 PF08279.12 AID33834.1 - 0.0052 16.7 0.2 0.022 14.7 0.1 2.0 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 AID33834.1 - 0.01 15.7 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 AID33834.1 - 0.02 14.7 0.2 0.069 13.0 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.16 AID33834.1 - 0.069 12.7 0.1 0.29 10.7 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 MarR PF01047.22 AID33834.1 - 0.082 12.9 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_CodY PF08222.11 AID33834.1 - 0.11 12.0 0.0 0.27 10.8 0.0 1.6 1 0 0 1 1 1 0 CodY helix-turn-helix domain Fe_dep_repress PF01325.19 AID33834.1 - 0.12 12.6 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.6 AID33834.1 - 0.13 12.2 0.0 0.66 10.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain RepL PF05732.11 AID33834.1 - 0.2 11.1 0.0 0.31 10.5 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) Peripla_BP_4 PF13407.6 AID33835.1 - 2.7e-34 118.9 3.0 3.6e-34 118.5 3.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_4 PF13407.6 AID33836.1 - 2.1e-46 158.6 5.5 2.7e-46 158.2 5.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 AID33836.1 - 0.00018 21.3 3.4 0.0002 21.1 2.5 1.5 1 1 1 2 2 2 1 Periplasmic binding protein Asparaginase_C PF17763.1 AID33836.1 - 0.01 16.0 0.3 2.6 8.3 0.0 2.4 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain Peripla_BP_1 PF00532.21 AID33836.1 - 0.043 13.2 1.4 0.28 10.5 1.0 2.1 1 1 1 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family Ycf9 PF01737.17 AID33836.1 - 0.18 11.7 0.0 0.36 10.7 0.0 1.4 1 0 0 1 1 1 0 YCF9 ABC_tran PF00005.27 AID33837.1 - 2.4e-40 138.2 0.1 7.9e-26 91.2 0.0 2.2 2 0 0 2 2 2 2 ABC transporter Zeta_toxin PF06414.12 AID33837.1 - 7.8e-05 22.0 0.0 0.00024 20.5 0.0 1.8 1 0 0 1 1 1 1 Zeta toxin AAA_21 PF13304.6 AID33837.1 - 0.00053 19.9 0.0 0.0028 17.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID33837.1 - 0.00058 20.3 0.4 0.0013 19.2 0.4 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID33837.1 - 0.0016 18.2 0.2 0.011 15.5 0.2 2.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID33837.1 - 0.01 15.5 0.0 0.023 14.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 AID33837.1 - 0.016 14.8 0.1 1.3 8.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 AID33837.1 - 0.021 15.1 0.5 0.55 10.5 0.5 2.5 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID33837.1 - 0.036 14.0 0.1 0.099 12.5 0.1 1.6 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 AID33837.1 - 0.065 13.7 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID33837.1 - 0.074 13.3 0.0 3.1 8.1 0.0 2.4 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 AID33837.1 - 0.09 12.9 0.0 0.24 11.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 AID33837.1 - 0.15 11.5 0.0 4 6.8 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain BPD_transp_2 PF02653.16 AID33838.1 - 3.8e-41 141.0 39.3 3.8e-41 141.0 39.3 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID33839.1 - 3.3e-41 141.2 49.8 3.3e-41 141.2 49.8 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component SGL PF08450.12 AID33840.1 - 3.1e-87 292.2 0.1 3.6e-87 292.0 0.1 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 AID33840.1 - 0.016 15.1 0.4 0.044 13.7 0.1 1.9 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 AID33840.1 - 0.12 12.6 0.0 0.44 10.8 0.0 1.9 2 0 0 2 2 2 0 Arylesterase CAAD PF14159.6 AID33841.1 - 0.09 12.6 1.5 0.11 12.3 1.5 1.2 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase OFeT_1 PF16955.5 AID33842.1 - 8.5e-08 32.1 13.6 1.5e-05 24.8 13.6 2.2 1 1 0 1 1 1 1 Ferrous iron uptake permease, iron-lead transporter UPF0016 PF01169.19 AID33842.1 - 2.5e-05 24.5 32.1 4e-05 23.9 12.7 2.7 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 AAA_18 PF13238.6 AID33843.1 - 4e-05 24.2 0.0 0.00013 22.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33843.1 - 0.0011 19.1 0.6 0.091 12.9 0.6 2.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID33843.1 - 0.021 14.6 0.0 0.053 13.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 AID33843.1 - 0.039 14.5 0.0 0.06 13.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 AID33843.1 - 0.053 13.2 0.1 0.067 12.9 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 AID33843.1 - 0.17 12.3 0.2 6.2 7.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain Amidohydro_3 PF07969.11 AID33844.1 - 2e-13 50.6 8.3 1.4e-11 44.6 1.2 2.4 1 1 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 AID33844.1 - 6.3e-10 38.9 0.8 4.4e-08 32.8 0.8 2.8 1 1 0 1 1 1 1 Amidohydrolase family Vps39_2 PF10367.9 AID33844.1 - 0.19 12.2 0.0 0.32 11.4 0.0 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 DUF1045 PF06299.12 AID33845.1 - 6.9e-60 201.6 0.6 1.1e-59 200.9 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1045) 2_5_RNA_ligase2 PF13563.6 AID33845.1 - 0.00017 21.5 0.3 0.00031 20.7 0.3 1.5 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily KduI PF04962.12 AID33846.1 - 2.1e-110 368.2 0.0 2.4e-110 367.9 0.0 1.0 1 0 0 1 1 1 1 KduI/IolB family Cupin_3 PF05899.12 AID33846.1 - 0.031 14.0 0.1 5.5 6.8 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF861) PhoR PF11808.8 AID33847.1 - 0.002 18.5 0.2 0.0023 18.3 0.2 1.1 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR DUF3318 PF11780.8 AID33847.1 - 0.009 16.0 0.0 0.0093 15.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3318) DUF1206 PF06724.11 AID33847.1 - 0.032 14.3 2.5 0.032 14.3 2.5 1.7 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) AP_endonuc_2 PF01261.24 AID33848.1 - 3.6e-19 69.0 0.0 5.2e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 AID33848.1 - 0.024 14.3 0.0 0.11 12.3 0.0 2.1 3 0 0 3 3 3 0 AP endonuclease family 2 C terminus TPP_enzyme_M PF00205.22 AID33849.1 - 3.8e-38 130.3 0.3 8.1e-38 129.3 0.3 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 AID33849.1 - 1.9e-37 128.5 1.8 4.7e-37 127.2 0.3 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID33849.1 - 3.6e-35 121.0 1.5 8.6e-35 119.8 0.2 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF2090 PF09863.9 AID33850.1 - 2.7e-132 440.5 0.7 3.7e-132 440.1 0.7 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2090) PfkB PF00294.24 AID33850.1 - 5.8e-46 157.2 0.0 1.3e-45 156.0 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DeoC PF01791.9 AID33850.1 - 0.2 11.2 4.1 1.2 8.7 0.2 3.0 3 1 0 3 3 3 0 DeoC/LacD family aldolase SIS PF01380.22 AID33851.1 - 2e-32 111.8 0.7 3e-32 111.2 0.7 1.3 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 AID33851.1 - 1.2e-09 38.0 0.0 3.4e-09 36.5 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 AID33851.1 - 0.0018 18.3 0.6 0.018 15.1 0.1 2.5 2 1 1 3 3 3 1 SIS domain Arg_repressor_C PF02863.18 AID33851.1 - 0.35 10.8 1.6 12 5.8 0.0 2.9 3 0 0 3 3 3 0 Arginine repressor, C-terminal domain GFO_IDH_MocA PF01408.22 AID33852.1 - 9.2e-25 87.8 0.1 1.4e-24 87.2 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID33852.1 - 0.00058 19.9 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain OCD_Mu_crystall PF02423.15 AID33852.1 - 0.067 12.1 0.0 0.097 11.6 0.0 1.1 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family HTH_11 PF08279.12 AID33853.1 - 2e-16 59.7 0.2 4e-16 58.7 0.2 1.6 1 0 0 1 1 1 1 HTH domain WYL PF13280.6 AID33853.1 - 1.9e-14 54.1 0.1 3.4e-14 53.2 0.1 1.4 1 0 0 1 1 1 1 WYL domain HTH_13 PF11972.8 AID33853.1 - 0.064 13.3 0.1 0.18 11.9 0.1 1.8 1 0 0 1 1 1 0 HTH DNA binding domain LysE PF01810.18 AID33854.1 - 6.4e-23 81.2 12.5 8.7e-23 80.8 12.5 1.1 1 0 0 1 1 1 1 LysE type translocator DUF808 PF05661.12 AID33854.1 - 0.057 12.5 3.1 0.11 11.5 0.1 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF808) DAHP_synth_1 PF00793.20 AID33855.1 - 1.4e-99 332.4 0.0 1.8e-99 332.1 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family adh_short_C2 PF13561.6 AID33856.1 - 2.4e-50 171.3 0.3 3e-50 171.0 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID33856.1 - 1.8e-47 161.3 0.5 2.3e-47 161.0 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID33856.1 - 1.3e-18 67.5 1.2 1.9e-18 67.0 1.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID33856.1 - 0.00057 19.4 1.3 0.0031 17.0 1.3 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID33856.1 - 0.0056 16.1 0.4 0.11 11.9 0.4 2.0 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Shikimate_DH PF01488.20 AID33856.1 - 0.061 13.4 0.1 0.097 12.7 0.1 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 AID33856.1 - 0.073 13.3 0.4 0.12 12.7 0.4 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Nitro_FeMo-Co PF02579.17 AID33856.1 - 0.11 12.8 0.3 0.26 11.6 0.3 1.6 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Polysacc_synt_2 PF02719.15 AID33856.1 - 0.11 11.5 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NmrA PF05368.13 AID33856.1 - 0.2 11.2 1.4 0.28 10.7 1.4 1.2 1 0 0 1 1 1 0 NmrA-like family GFO_IDH_MocA PF01408.22 AID33857.1 - 5.2e-25 88.6 0.6 1.1e-24 87.5 0.6 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 AID33857.1 - 5.7e-11 42.4 0.0 1.1e-10 41.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.17 AID33857.1 - 2.7e-06 27.9 0.6 7.5e-06 26.4 0.6 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 AID33857.1 - 9.8e-06 26.0 0.1 2.4e-05 24.7 0.1 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 AID33857.1 - 0.0012 19.1 0.0 0.0049 17.2 0.0 2.1 1 1 1 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 AID33857.1 - 0.0034 17.5 0.4 0.008 16.3 0.1 1.8 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 AID33857.1 - 0.0061 17.2 0.7 0.015 16.0 0.7 1.7 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Peripla_BP_1 PF00532.21 AID33857.1 - 0.0078 15.7 0.3 0.016 14.6 0.2 1.5 2 0 0 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family PDH PF02153.17 AID33857.1 - 0.0092 15.0 0.3 0.1 11.6 0.3 2.1 1 1 1 2 2 2 1 Prephenate dehydrogenase Shikimate_DH PF01488.20 AID33857.1 - 0.021 14.9 0.3 0.034 14.2 0.3 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase CoA_binding PF02629.19 AID33857.1 - 0.022 15.4 0.3 0.064 13.9 0.3 1.7 1 0 0 1 1 1 0 CoA binding domain LMWSLP_N PF12211.8 AID33857.1 - 0.023 14.3 0.2 0.05 13.2 0.2 1.5 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal IlvN PF07991.12 AID33857.1 - 0.036 13.6 0.1 0.071 12.7 0.1 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain OCD_Mu_crystall PF02423.15 AID33857.1 - 0.036 13.0 0.8 0.059 12.3 0.8 1.3 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family TrkA_N PF02254.18 AID33857.1 - 0.062 13.6 0.4 0.16 12.2 0.4 1.8 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 AID33857.1 - 0.16 12.2 1.1 0.46 10.7 1.1 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ABC_tran PF00005.27 AID33858.1 - 1.5e-28 100.0 0.0 2.2e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID33858.1 - 2.7e-07 30.3 0.2 7e-06 25.6 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID33858.1 - 0.00073 19.2 0.0 0.0019 17.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID33858.1 - 0.0022 18.5 0.0 0.0042 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 AID33858.1 - 0.0023 17.8 0.0 1.3 8.8 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID33858.1 - 0.0045 17.4 0.0 0.011 16.1 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 AID33858.1 - 0.0062 16.3 0.1 0.42 10.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain MCM PF00493.23 AID33858.1 - 0.0093 15.1 0.0 0.016 14.3 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain RsgA_GTPase PF03193.16 AID33858.1 - 0.013 15.4 0.0 0.031 14.2 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 AID33858.1 - 0.016 15.1 0.3 1.6 8.6 0.0 2.2 2 0 0 2 2 2 0 NTPase FtsK_SpoIIIE PF01580.18 AID33858.1 - 0.018 14.4 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_22 PF13401.6 AID33858.1 - 0.022 15.0 0.1 0.095 13.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 AID33858.1 - 0.024 14.7 0.0 0.05 13.7 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 AID33858.1 - 0.024 14.7 0.0 0.065 13.3 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase TsaE PF02367.17 AID33858.1 - 0.037 14.0 0.1 0.066 13.2 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 AID33858.1 - 0.041 13.6 0.1 0.22 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 AID33858.1 - 0.069 12.7 0.0 0.5 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID33858.1 - 0.09 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain DLIC PF05783.11 AID33858.1 - 0.095 11.5 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF3584 PF12128.8 AID33858.1 - 0.13 9.8 0.0 0.18 9.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_27 PF13514.6 AID33858.1 - 0.14 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 AID33859.1 - 1e-46 159.3 34.3 1e-46 159.3 34.3 1.7 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 AID33860.1 - 2.9e-51 174.5 20.3 3.4e-51 174.3 20.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 AID33860.1 - 3.1e-09 36.7 5.1 3.6e-09 36.4 5.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 AID33860.1 - 1.7e-05 25.2 0.3 5.3e-05 23.6 0.1 1.9 1 1 1 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 AID33860.1 - 2e-05 24.4 10.1 5.9e-05 22.9 10.0 1.8 1 1 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 AID33860.1 - 0.014 14.5 0.2 0.036 13.2 0.1 1.7 2 0 0 2 2 2 0 Receptor family ligand binding region PucR PF07905.11 AID33860.1 - 0.015 15.5 0.1 0.034 14.4 0.1 1.5 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family DHquinase_II PF01220.19 AID33860.1 - 0.029 14.1 0.8 0.069 12.8 0.1 1.9 2 0 0 2 2 2 0 Dehydroquinase class II YflT PF11181.8 AID33860.1 - 0.074 13.6 0.5 7.8 7.1 0.1 2.5 2 0 0 2 2 2 0 Heat induced stress protein YflT DUF3898 PF13037.6 AID33860.1 - 0.12 12.5 0.0 0.32 11.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3898) DUF442 PF04273.13 AID33860.1 - 0.45 10.6 5.0 0.73 9.9 0.3 2.8 3 0 0 3 3 3 0 Putative phosphatase (DUF442) Peripla_BP_4 PF13407.6 AID33861.1 - 5.4e-24 85.2 0.0 8.9e-24 84.4 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 AID33861.1 - 3.5e-11 42.7 0.4 6.9e-11 41.8 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family GARS_N PF02844.15 AID33861.1 - 0.037 14.8 0.1 2.4 9.0 0.0 2.4 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain HicB_lk_antitox PF15919.5 AID33861.1 - 0.063 13.4 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system HTH_26 PF13443.6 AID33861.1 - 0.13 12.7 0.0 0.44 11.0 0.0 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain MerR PF00376.23 AID33861.1 - 0.44 10.4 2.7 0.72 9.7 0.2 2.5 3 0 0 3 3 3 0 MerR family regulatory protein FA_desaturase PF00487.24 AID33862.1 - 2.8e-34 119.1 19.7 2.8e-34 119.1 19.7 1.9 1 1 1 2 2 2 2 Fatty acid desaturase zf-RING_13 PF17977.1 AID33862.1 - 1.5 9.0 5.0 0.49 10.6 1.8 1.8 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Rieske PF00355.26 AID33863.1 - 1.4e-19 69.8 0.1 1.6e-19 69.6 0.1 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 AID33863.1 - 1.2e-11 44.5 0.0 1.3e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 AID33864.1 - 1.6e-62 211.4 0.6 1.9e-62 211.2 0.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 AID33864.1 - 9e-22 77.4 0.1 4.5e-21 75.2 0.0 2.2 2 0 0 2 2 2 1 Reductase C-terminal Pyr_redox PF00070.27 AID33864.1 - 1.2e-19 70.6 0.4 1.4e-16 60.8 0.5 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID33864.1 - 2.8e-07 30.1 0.1 6.3e-05 22.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID33864.1 - 2.5e-05 24.4 2.7 0.00039 20.6 0.3 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 AID33864.1 - 3.3e-05 23.2 2.9 0.13 11.3 2.2 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A Lycopene_cycl PF05834.12 AID33864.1 - 0.00026 20.1 4.0 0.077 12.0 1.0 2.9 2 1 1 3 3 3 2 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 AID33864.1 - 0.00037 19.8 1.2 0.00037 19.8 1.2 2.5 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 AID33864.1 - 0.0058 16.9 2.1 0.35 11.2 0.3 2.6 2 1 0 2 2 2 1 TrkA-N domain Amino_oxidase PF01593.24 AID33864.1 - 0.0091 15.3 0.4 4.5 6.4 0.0 2.7 2 1 1 3 3 3 2 Flavin containing amine oxidoreductase XdhC_C PF13478.6 AID33864.1 - 0.011 16.3 0.3 0.26 11.8 0.1 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain HI0933_like PF03486.14 AID33864.1 - 0.012 14.3 8.8 0.11 11.2 1.5 3.4 3 1 1 4 4 4 0 HI0933-like protein DAO PF01266.24 AID33864.1 - 0.014 15.0 10.0 0.015 14.9 5.6 2.6 2 1 0 2 2 2 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID33864.1 - 0.021 14.7 0.7 0.021 14.7 0.7 1.8 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 AID33864.1 - 0.022 14.2 2.2 0.039 13.3 0.1 2.2 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AID33864.1 - 0.022 15.2 0.5 0.72 10.3 0.2 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding DoxX_2 PF13564.6 AID33864.1 - 0.026 14.6 0.1 0.086 13.0 0.1 1.9 1 0 0 1 1 1 0 DoxX-like family UDPG_MGDP_dh_N PF03721.14 AID33864.1 - 0.041 13.4 0.0 0.091 12.3 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_9 PF13454.6 AID33864.1 - 0.064 13.2 7.1 2 8.4 0.1 3.7 3 1 1 4 4 4 0 FAD-NAD(P)-binding ApbA PF02558.16 AID33864.1 - 0.13 11.9 0.8 6.8 6.3 0.0 2.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA DFP PF04127.15 AID33864.1 - 0.17 11.7 0.3 0.3 10.9 0.3 1.4 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein FAD_binding_2 PF00890.24 AID33864.1 - 0.84 8.6 11.0 0.68 9.0 2.6 2.9 3 0 0 3 3 3 0 FAD binding domain AdoHcyase_NAD PF00670.21 AID33864.1 - 1.1 9.3 4.0 0.59 10.2 0.5 2.1 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF1402 PF07182.11 AID33865.1 - 1.5e-157 523.4 0.0 1.7e-157 523.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1402) AAA_2 PF07724.14 AID33866.1 - 4.2e-42 144.2 0.0 2.2e-34 119.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 AID33866.1 - 4.2e-14 53.1 0.2 2.1e-05 24.9 0.0 3.5 2 1 1 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 AID33866.1 - 1.2e-07 31.8 0.6 6.3e-05 23.0 0.0 2.9 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) ClpB_D2-small PF10431.9 AID33866.1 - 1e-06 28.7 1.7 1.1e-05 25.4 0.1 2.7 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein MCM PF00493.23 AID33866.1 - 7.7e-05 21.9 0.1 0.002 17.3 0.0 2.3 2 0 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 AID33866.1 - 0.00014 22.1 0.1 0.0018 18.5 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID33866.1 - 0.00021 21.7 2.5 0.0018 18.7 1.4 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 AID33866.1 - 0.00036 20.8 0.2 0.0013 19.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 AID33866.1 - 0.0007 19.0 0.1 0.033 13.6 0.0 2.9 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 AID33866.1 - 0.002 17.9 0.1 0.077 12.7 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 AID33866.1 - 0.0025 17.5 0.0 0.29 10.8 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_33 PF13671.6 AID33866.1 - 0.0045 17.2 0.0 0.013 15.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID33866.1 - 0.0048 17.4 0.0 0.012 16.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain DEAD PF00270.29 AID33866.1 - 0.015 15.1 0.1 2.5 7.8 0.0 2.8 2 0 0 2 2 2 0 DEAD/DEAH box helicase TIP49 PF06068.13 AID33866.1 - 0.024 13.9 0.1 0.042 13.1 0.1 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain TniB PF05621.11 AID33866.1 - 0.027 13.9 0.3 0.079 12.4 0.0 1.9 2 1 0 2 2 2 0 Bacterial TniB protein RsgA_GTPase PF03193.16 AID33866.1 - 0.052 13.5 0.0 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase TsaE PF02367.17 AID33866.1 - 0.054 13.5 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IPT PF01745.16 AID33866.1 - 0.056 12.8 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase IstB_IS21 PF01695.17 AID33866.1 - 0.1 12.4 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2585 PF10755.9 AID33867.1 - 8e-86 285.8 0.3 9.5e-86 285.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2585) Acetyltransf_8 PF13523.6 AID33868.1 - 6.4e-36 123.2 0.0 7.5e-36 123.0 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID33868.1 - 4.1e-11 43.7 0.0 6.4e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID33868.1 - 2.2e-07 31.1 0.0 3e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 AID33868.1 - 0.0013 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein CoA_binding_2 PF13380.6 AID33868.1 - 0.043 14.3 0.0 0.057 13.9 0.0 1.3 1 1 0 1 1 1 0 CoA binding domain YejG PF13989.6 AID33868.1 - 0.091 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 YejG-like protein Acetyltransf_10 PF13673.7 AID33868.1 - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Proteasome PF00227.26 AID33869.1 - 5.5e-24 84.7 2.0 1.2e-23 83.5 2.0 1.5 1 1 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.6 AID33869.1 - 0.012 15.0 0.1 0.021 14.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) IGPD PF00475.18 AID33870.1 - 2.8e-65 219.0 1.3 3.6e-65 218.6 1.3 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase DUF2628 PF10947.8 AID33871.1 - 1.4e-08 35.0 0.1 1.8e-08 34.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2628) EIIC-GAT PF03611.14 AID33871.1 - 0.058 12.5 0.7 0.077 12.1 0.7 1.0 1 0 0 1 1 1 0 PTS system sugar-specific permease component IFR3_antag PF14754.6 AID33871.1 - 0.14 11.3 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Papain-like auto-proteinase GATase PF00117.28 AID33872.1 - 3.3e-19 69.4 0.0 4e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 AID33872.1 - 0.00018 21.3 0.5 0.0023 17.7 0.5 2.1 1 1 0 1 1 1 1 Peptidase C26 GATase_5 PF13507.6 AID33872.1 - 0.00057 19.1 0.0 0.00079 18.6 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 AID33872.1 - 0.0011 18.9 0.0 1.5 8.6 0.0 2.1 2 0 0 2 2 2 2 SNO glutamine amidotransferase family GATase_3 PF07685.14 AID33872.1 - 0.0015 18.2 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 AID33872.1 - 0.068 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family His_biosynth PF00977.21 AID33873.1 - 4.2e-77 258.7 1.6 4.8e-77 258.5 1.6 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 AID33873.1 - 2.6e-06 26.7 0.2 0.01 15.0 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.14 AID33873.1 - 0.057 12.7 4.4 0.27 10.5 0.1 2.2 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Arginase PF00491.21 AID33874.1 - 7.1e-19 68.4 0.4 8.8e-19 68.1 0.4 1.1 1 0 0 1 1 1 1 Arginase family His_biosynth PF00977.21 AID33875.1 - 1.9e-89 299.1 3.0 2.1e-89 298.9 3.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 AID33875.1 - 0.0032 16.9 0.3 0.082 12.3 0.0 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator NMO PF03060.15 AID33875.1 - 0.0045 16.4 8.7 0.083 12.3 3.7 2.1 1 1 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 AID33875.1 - 0.0076 15.6 8.4 0.33 10.2 0.8 2.4 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 AID33875.1 - 0.011 15.0 0.8 2 7.5 0.0 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase IMPDH PF00478.25 AID33875.1 - 0.81 8.6 6.6 0.33 9.9 0.6 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 AID33875.1 - 9.6 5.1 9.5 0.25 10.4 0.2 2.2 1 1 0 2 2 2 0 FMN-dependent dehydrogenase PRA-PH PF01503.17 AID33876.1 - 6.8e-17 61.7 0.0 7.7e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 AID33876.1 - 0.1 12.8 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain PRK PF00485.18 AID33877.1 - 1.9e-10 40.8 0.0 5.1e-10 39.4 0.0 1.7 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 AID33877.1 - 0.013 16.1 0.0 0.023 15.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain CoaE PF01121.20 AID33877.1 - 0.065 12.9 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase Zeta_toxin PF06414.12 AID33877.1 - 0.15 11.3 0.0 0.89 8.8 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin Trypsin_2 PF13365.6 AID33878.1 - 6.4e-35 121.3 2.2 1.9e-34 119.8 2.2 1.8 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 AID33878.1 - 1.8e-26 92.2 10.0 2e-14 53.7 0.3 3.7 4 1 0 4 4 4 2 PDZ domain PDZ_6 PF17820.1 AID33878.1 - 1.2e-18 66.7 9.1 5.8e-09 35.7 0.2 3.2 3 0 0 3 3 3 2 PDZ domain PDZ PF00595.24 AID33878.1 - 1.7e-17 63.5 6.6 9.3e-11 41.9 0.6 3.9 3 1 0 3 3 3 2 PDZ domain Trypsin PF00089.26 AID33878.1 - 3.8e-15 56.3 0.2 1.3e-14 54.6 0.2 1.8 1 1 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 AID33878.1 - 3.8e-05 23.6 3.4 0.12 12.4 0.1 3.1 3 0 0 3 3 3 2 Tricorn protease PDZ domain GRASP55_65 PF04495.14 AID33878.1 - 0.0015 18.8 0.1 0.42 10.9 0.0 2.5 1 1 1 2 2 2 1 GRASP55/65 PDZ-like domain Peptidase_S46 PF10459.9 AID33878.1 - 0.0049 15.6 0.7 2.1 6.9 0.0 2.2 2 0 0 2 2 2 2 Peptidase S46 SPW PF03779.14 AID33878.1 - 0.1 12.2 0.4 0.29 10.7 0.4 1.8 1 0 0 1 1 1 0 SPW repeat Lactamase_B PF00753.27 AID33880.1 - 1.4e-16 61.1 5.0 3.7e-16 59.7 5.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily TPMT PF05724.11 AID33880.1 - 0.16 11.6 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) PFK PF00365.20 AID33881.1 - 6.9e-39 133.9 0.0 8.2e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Phosphofructokinase YkuD PF03734.14 AID33882.1 - 4.4e-17 62.9 0.1 6.4e-17 62.3 0.1 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysE PF01810.18 AID33885.1 - 1.7e-31 109.2 13.5 2.1e-31 108.9 13.5 1.0 1 0 0 1 1 1 1 LysE type translocator DUF5362 PF17319.2 AID33885.1 - 0.018 14.8 0.4 0.018 14.8 0.4 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5362) TerC PF03741.16 AID33885.1 - 0.4 10.3 8.4 0.032 13.9 3.3 1.9 2 1 0 2 2 2 0 Integral membrane protein TerC family Autotransporter PF03797.19 AID33886.1 - 1.4e-49 169.1 24.0 1.4e-49 169.1 24.0 4.5 2 1 1 4 4 4 1 Autotransporter beta-domain TPR_2 PF07719.17 AID33887.1 - 9.2e-06 25.4 1.0 0.25 11.5 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 AID33887.1 - 0.0093 16.0 0.0 1.5 8.9 0.0 3.0 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 AID33887.1 - 0.011 16.3 7.9 3.2 8.3 0.0 3.9 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 AID33887.1 - 0.015 16.1 21.0 0.49 11.3 0.9 6.0 6 1 1 7 7 7 0 Tetratricopeptide repeat ANAPC3 PF12895.7 AID33887.1 - 0.017 15.3 0.7 0.46 10.8 0.1 3.1 3 1 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 AID33887.1 - 0.032 14.1 4.5 3.9 7.5 0.1 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 AID33887.1 - 0.54 11.0 20.2 1.9 9.4 4.0 5.2 4 0 0 4 4 4 0 Tetratricopeptide repeat FGGY_N PF00370.21 AID33888.1 - 2.4e-71 240.2 0.0 3.4e-71 239.7 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 AID33888.1 - 1.3e-33 116.4 1.0 3e-33 115.2 1.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 AID33888.1 - 0.054 13.0 0.0 4.4 6.7 0.0 2.2 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Ribosomal_L12_N PF16320.5 AID33888.1 - 0.062 13.0 0.4 0.22 11.3 0.4 1.9 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain SnoaL_2 PF12680.7 AID33889.1 - 4.6e-11 43.3 0.0 5.3e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 AID33889.1 - 0.0027 17.5 0.1 0.089 12.6 0.1 2.0 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_4 PF13577.6 AID33889.1 - 0.18 12.0 0.1 0.26 11.4 0.1 1.3 1 1 0 1 1 1 0 SnoaL-like domain AP_endonuc_2 PF01261.24 AID33890.1 - 1.7e-06 27.7 0.0 0.00048 19.6 0.0 2.3 1 1 1 2 2 2 2 Xylose isomerase-like TIM barrel BTG PF07742.12 AID33891.1 - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 BTG family BKACE PF05853.12 AID33894.1 - 3.9e-96 321.6 0.3 4.4e-96 321.4 0.3 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme HTH_18 PF12833.7 AID33895.1 - 2e-21 76.0 1.9 2e-21 76.0 1.9 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33895.1 - 8e-15 54.5 0.0 5.2e-06 26.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 AID33895.1 - 0.00024 20.8 2.6 0.0079 16.0 0.1 2.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_Crp_2 PF13545.6 AID33895.1 - 0.004 17.1 0.3 0.52 10.3 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 AID33895.1 - 0.014 15.2 1.4 1.2 9.0 0.2 2.6 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID33895.1 - 0.055 12.9 0.5 0.2 11.1 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DJ-1_PfpI PF01965.24 AID33895.1 - 0.14 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family HD PF01966.22 AID33896.1 - 0.00013 22.1 0.1 0.0002 21.6 0.1 1.3 1 0 0 1 1 1 1 HD domain MIOX PF05153.15 AID33896.1 - 0.00061 19.4 0.0 0.00083 19.0 0.0 1.3 1 0 0 1 1 1 1 Myo-inositol oxygenase 3HCDH_N PF02737.18 AID33897.1 - 1.4e-41 142.4 0.3 2.4e-41 141.6 0.0 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 AID33897.1 - 1.2e-12 48.3 0.0 4.1e-12 46.6 0.0 1.9 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 AID33897.1 - 4.3e-05 23.7 0.0 9.4e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 AID33897.1 - 0.1 11.9 0.1 0.2 10.9 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 AID33897.1 - 0.22 12.1 1.5 0.37 11.4 0.1 2.3 2 1 1 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Acyl-CoA_dh_1 PF00441.24 AID33898.1 - 2e-50 170.9 4.1 3e-50 170.3 4.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 AID33898.1 - 5.8e-24 84.9 1.3 9.8e-24 84.1 1.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID33898.1 - 9e-24 83.5 0.0 1.9e-23 82.5 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 AID33898.1 - 4.6e-21 75.6 1.1 7e-21 75.0 0.2 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain ATP-grasp_5 PF13549.6 AID33899.1 - 2.7e-42 144.7 0.1 5.4e-42 143.8 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 AID33899.1 - 4.1e-29 101.1 1.1 9.8e-29 99.9 1.1 1.6 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 AID33899.1 - 9.3e-18 64.8 0.1 1.7e-17 64.0 0.1 1.5 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 AID33899.1 - 0.00091 19.9 0.1 0.0025 18.4 0.1 1.8 1 0 0 1 1 1 1 CoA binding domain ECH_1 PF00378.20 AID33900.1 - 1.5e-62 211.2 0.0 1.7e-62 211.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID33900.1 - 2.1e-29 103.1 0.0 4.8e-29 101.9 0.0 1.6 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 AID33900.1 - 0.011 15.7 0.0 0.029 14.3 0.0 1.7 1 0 0 1 1 1 0 Peptidase family S49 Abhydrolase_3 PF07859.13 AID33901.1 - 2.7e-59 200.6 0.2 3.6e-59 200.2 0.2 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold CW_binding_2 PF04122.12 AID33901.1 - 0.0048 17.5 0.3 0.019 15.6 0.0 2.1 2 1 0 2 2 2 1 Putative cell wall binding repeat 2 Hydrolase_4 PF12146.8 AID33901.1 - 0.018 14.3 0.4 0.072 12.3 0.4 2.0 1 1 0 2 2 2 0 Serine aminopeptidase, S33 Say1_Mug180 PF10340.9 AID33901.1 - 0.047 12.5 0.0 0.088 11.6 0.0 1.4 1 1 0 1 1 1 0 Steryl acetyl hydrolase COesterase PF00135.28 AID33901.1 - 0.054 12.4 0.0 0.1 11.4 0.0 1.3 1 0 0 1 1 1 0 Carboxylesterase family FAD_binding_2 PF00890.24 AID33902.1 - 2.3e-114 382.7 0.9 2.6e-114 382.5 0.9 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 AID33902.1 - 7.4e-09 35.7 0.1 8e-06 25.7 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID33902.1 - 5.3e-08 32.5 0.6 1.5e-07 31.0 0.1 1.8 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 AID33902.1 - 2.1e-07 30.7 0.0 3.9e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 AID33902.1 - 3e-07 30.5 0.5 9.4e-07 29.0 0.5 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID33902.1 - 1.6e-06 27.5 0.7 2.7e-05 23.5 0.1 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID33902.1 - 2e-05 23.8 1.0 4.2e-05 22.8 0.2 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 AID33902.1 - 2.6e-05 23.6 0.6 7.3e-05 22.1 0.1 1.9 3 0 0 3 3 3 1 Thi4 family GIDA PF01134.22 AID33902.1 - 7e-05 22.1 0.6 0.00016 20.9 0.6 1.6 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 AID33902.1 - 0.00015 20.6 1.4 0.00015 20.6 1.4 2.4 3 0 0 3 3 3 1 HI0933-like protein AlaDh_PNT_C PF01262.21 AID33902.1 - 0.0015 17.9 0.4 0.0028 17.0 0.4 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 AID33902.1 - 0.0016 18.4 0.2 0.004 17.1 0.0 1.7 2 0 0 2 2 2 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 AID33902.1 - 0.0032 18.0 0.7 0.0032 18.0 0.7 2.4 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AID33902.1 - 0.0062 17.0 0.0 0.094 13.2 0.0 2.2 2 0 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 AID33902.1 - 0.01 15.4 0.1 0.026 14.1 0.1 1.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 AID33902.1 - 0.013 15.7 0.3 0.047 14.0 0.2 1.9 2 0 0 2 2 2 0 TrkA-N domain Trp_halogenase PF04820.14 AID33902.1 - 0.031 13.1 0.3 0.045 12.6 0.3 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Amino_oxidase PF01593.24 AID33902.1 - 0.12 11.6 2.5 1.3 8.2 0.1 2.6 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase GDI PF00996.18 AID33902.1 - 0.28 9.7 0.0 0.41 9.1 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor Pyr_redox_3 PF13738.6 AID33902.1 - 0.32 10.2 4.5 0.17 11.1 1.9 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GFO_IDH_MocA PF01408.22 AID33903.1 - 5.9e-19 69.1 0.0 1.6e-18 67.7 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold Enolase_like_N PF18374.1 AID33903.1 - 0.15 11.5 0.3 0.38 10.2 0.0 1.8 2 0 0 2 2 2 0 Enolase N-terminal domain-like YceI PF04264.13 AID33904.1 - 3.9e-26 92.4 0.3 4.8e-26 92.1 0.3 1.1 1 0 0 1 1 1 1 YceI-like domain Ni_hydr_CYTB PF01292.20 AID33905.1 - 1.1e-27 96.8 17.1 1.3e-27 96.6 17.1 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 AID33905.1 - 0.021 15.4 4.3 0.021 15.4 4.3 2.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4405) LysR_substrate PF03466.20 AID33906.1 - 3.3e-40 137.7 2.7 3.3e-40 137.7 2.7 1.5 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 AID33906.1 - 4.9e-19 68.0 2.8 1.2e-18 66.8 2.8 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_28 PF13518.6 AID33906.1 - 0.12 12.5 0.7 0.62 10.2 0.2 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Aldo_ket_red PF00248.21 AID33907.1 - 4.4e-83 278.9 0.0 5.4e-83 278.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family NTP_transf_6 PF06042.11 AID33908.1 - 1.4e-52 177.8 0.0 1.6e-52 177.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyltransferase B3_4 PF03483.17 AID33909.1 - 2e-62 209.9 0.0 8.7e-62 207.9 0.0 1.9 2 0 0 2 2 2 1 B3/4 domain tRNA_synthFbeta PF17759.1 AID33909.1 - 3.6e-39 134.4 0.0 5.9e-39 133.7 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain FDX-ACB PF03147.14 AID33909.1 - 7e-23 80.9 0.1 1.4e-22 79.9 0.1 1.5 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain tRNA_bind PF01588.20 AID33909.1 - 1.3e-22 79.7 0.0 2.8e-22 78.6 0.0 1.6 1 0 0 1 1 1 1 Putative tRNA binding domain B5 PF03484.15 AID33909.1 - 1.4e-20 73.3 0.2 1.4e-17 63.7 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetase B5 domain GFA PF04828.14 AID33910.1 - 1.7e-19 69.9 0.0 2.4e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme tRNA-synt_2d PF01409.20 AID33911.1 - 7.9e-104 346.5 0.0 9.7e-104 346.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Phe_tRNA-synt_N PF02912.18 AID33911.1 - 9e-18 64.0 1.1 1.4e-17 63.3 1.1 1.3 1 0 0 1 1 1 1 Aminoacyl tRNA synthetase class II, N-terminal domain Ribosomal_L20 PF00453.18 AID33912.1 - 1.8e-49 166.3 5.0 2.2e-49 166.0 5.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 DUF1719 PF08224.11 AID33912.1 - 0.1 11.7 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Styelin PF17562.2 AID33912.1 - 0.27 11.6 1.6 7.5 7.0 0.0 2.5 2 1 0 2 2 2 0 Styelin Ribosomal_L35p PF01632.19 AID33913.1 - 3e-19 69.3 5.5 3.5e-19 69.1 5.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L35 PEMT PF04191.13 AID33914.1 - 6e-11 42.7 0.9 6e-11 42.7 0.9 2.5 2 1 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 AID33914.1 - 0.012 16.0 0.7 0.016 15.6 0.0 1.6 2 0 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Vel1p PF10339.9 AID33914.1 - 0.024 14.0 0.0 0.035 13.5 0.0 1.2 1 0 0 1 1 1 0 Yeast-specific zinc responsive SecE PF00584.20 AID33914.1 - 7.5 6.6 7.8 0.38 10.7 0.4 2.5 3 0 0 3 3 3 0 SecE/Sec61-gamma subunits of protein translocation complex IF3_C PF00707.22 AID33915.1 - 9.3e-40 134.5 3.4 1.2e-39 134.1 3.4 1.2 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain IF3_N PF05198.16 AID33915.1 - 2.8e-14 53.1 0.1 6.7e-14 51.9 0.1 1.7 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain AHSA1 PF08327.11 AID33915.1 - 0.042 14.1 0.1 0.052 13.8 0.1 1.2 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein EphA2_TM PF14575.6 AID33915.1 - 0.15 13.0 0.1 0.2 12.6 0.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Hydrolase_4 PF12146.8 AID33916.1 - 1.7e-13 50.4 0.3 1.9e-09 37.1 0.1 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 AID33916.1 - 3.6e-09 37.5 1.5 5.8e-09 36.9 1.5 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 AID33916.1 - 1.5e-05 25.0 0.0 1.7e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold LIDHydrolase PF10230.9 AID33916.1 - 0.00089 18.9 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Peptidase_S9 PF00326.21 AID33916.1 - 0.0066 15.9 0.3 0.053 13.0 0.0 2.3 2 1 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 AID33916.1 - 0.011 15.4 0.0 0.23 11.1 0.0 2.0 1 1 1 2 2 2 0 alpha/beta hydrolase fold DUF900 PF05990.12 AID33916.1 - 0.026 14.1 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) BenE PF03594.13 AID33918.1 - 5.3e-144 479.7 47.4 5.9e-144 479.5 47.4 1.0 1 0 0 1 1 1 1 Benzoate membrane transport protein TRAP-gamma PF07074.12 AID33918.1 - 1.8 8.1 4.6 0.89 9.1 0.2 2.6 2 1 1 3 3 3 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF2852 PF11014.8 AID33919.1 - 1.3e-41 141.5 0.8 1.6e-41 141.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2852) DUF45 PF01863.17 AID33920.1 - 2.7e-59 200.7 0.0 3.5e-59 200.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 AID33920.1 - 0.023 14.8 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 WLM domain ubiquitin PF00240.23 AID33921.1 - 0.091 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin family PRAI PF00697.22 AID33922.1 - 2.6e-44 151.4 0.0 2.9e-44 151.2 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PALP PF00291.25 AID33923.1 - 4.9e-45 154.2 0.2 5.7e-45 154.0 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Tom7 PF08038.12 AID33923.1 - 0.12 12.0 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 TOM7 family Trp_syntA PF00290.20 AID33924.1 - 8.6e-88 293.5 0.2 1e-87 293.3 0.2 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 AID33924.1 - 5.5e-05 22.7 1.3 6.5e-05 22.5 0.4 1.5 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.17 AID33924.1 - 0.01 15.3 0.9 0.018 14.5 0.9 1.3 1 0 0 1 1 1 0 PcrB family Carboxyl_trans PF01039.22 AID33925.1 - 1.1e-20 73.8 0.0 1.5e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Carboxyl transferase domain zf-ACC PF17848.1 AID33925.1 - 0.24 11.5 0.0 0.4 10.8 0.0 1.3 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain Mur_ligase_M PF08245.12 AID33926.1 - 5.8e-10 39.5 0.0 1.3e-09 38.3 0.0 1.6 1 1 0 1 1 1 1 Mur ligase middle domain Glyoxalase PF00903.25 AID33927.1 - 3e-17 63.0 0.1 3.9e-17 62.6 0.1 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID33927.1 - 5.3e-10 39.5 0.0 1.3e-09 38.3 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID33927.1 - 0.00015 21.7 0.0 0.00022 21.2 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 AID33927.1 - 0.0004 21.1 0.0 0.00065 20.5 0.0 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 AID33927.1 - 0.0018 18.4 0.1 1.5 8.9 0.0 2.1 1 1 1 2 2 2 2 Glyoxalase-like domain PIN PF01850.21 AID33928.1 - 1.7e-14 54.3 0.0 2.1e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 AID33928.1 - 0.012 15.4 0.0 0.67 9.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) PIN_12 PF16289.5 AID33928.1 - 0.026 15.0 0.0 0.032 14.7 0.0 1.1 1 0 0 1 1 1 0 PIN domain Cupin_2 PF07883.11 AID33930.1 - 3.1e-05 23.6 0.5 4.8e-05 23.0 0.3 1.4 1 1 1 2 2 2 1 Cupin domain Laminin_G_2 PF02210.24 AID33930.1 - 0.052 14.1 0.0 0.074 13.6 0.0 1.3 1 1 0 1 1 1 0 Laminin G domain Cu-oxidase_2 PF07731.14 AID33930.1 - 0.066 12.9 0.0 0.074 12.8 0.0 1.1 1 0 0 1 1 1 0 Multicopper oxidase Thioredoxin PF00085.20 AID33931.1 - 1.2e-33 115.1 0.0 1.3e-33 115.0 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 AID33931.1 - 2.2e-10 40.9 0.0 1.9e-09 37.9 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 AID33931.1 - 1.2e-08 35.2 0.0 4.2e-06 27.0 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_9 PF14595.6 AID33931.1 - 2e-07 30.8 0.1 2.3e-07 30.6 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 AID33931.1 - 1e-05 25.3 0.0 0.00023 20.9 0.0 2.0 1 1 1 2 2 2 1 Redoxin AhpC-TSA PF00578.21 AID33931.1 - 1.3e-05 25.1 0.0 2.1e-05 24.4 0.0 1.4 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_3 PF13192.6 AID33931.1 - 5.1e-05 23.2 0.0 8.8e-05 22.5 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin domain OST3_OST6 PF04756.13 AID33931.1 - 0.00012 21.6 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family DUF836 PF05768.14 AID33931.1 - 0.00064 20.1 0.0 0.0009 19.6 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) TraF PF13728.6 AID33931.1 - 0.00084 19.2 0.0 0.00099 19.0 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 AID33931.1 - 0.005 17.0 0.1 0.014 15.6 0.0 1.8 1 1 1 2 2 2 1 Glutaredoxin TrbC_Ftype PF09673.10 AID33931.1 - 0.01 15.8 0.0 0.011 15.8 0.0 1.2 1 1 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein KaiB PF07689.12 AID33931.1 - 0.014 15.1 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 KaiB domain Thioredoxin_7 PF13899.6 AID33931.1 - 0.024 14.8 0.1 0.036 14.2 0.1 1.4 1 1 0 1 1 1 0 Thioredoxin-like Thioredoxin_6 PF13848.6 AID33931.1 - 0.051 13.5 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_5 PF13743.6 AID33931.1 - 0.076 12.7 0.0 0.84 9.3 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin DIM1 PF02966.16 AID33931.1 - 0.099 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 HyaE PF07449.11 AID33931.1 - 0.13 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Peptidase_M16 PF00675.20 AID33931.1 - 0.14 12.1 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) UvrD-helicase PF00580.21 AID33932.1 - 3.4e-47 161.5 0.0 2.2e-24 86.5 0.0 2.1 2 0 0 2 2 2 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 AID33932.1 - 1.3e-22 80.6 0.0 1.8e-20 73.7 0.0 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 AID33932.1 - 2.2e-20 73.5 0.0 3.8e-19 69.5 0.0 2.6 2 1 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 AID33932.1 - 7.7e-13 48.1 0.5 2.8e-05 23.8 0.3 2.8 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.7 AID33932.1 - 8.5e-11 42.2 0.0 2.1e-10 41.0 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_30 PF13604.6 AID33932.1 - 0.0035 17.1 0.2 0.092 12.5 0.1 2.7 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 AID33932.1 - 0.0076 16.0 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Viral_helicase1 PF01443.18 AID33932.1 - 0.011 15.5 0.1 15 5.3 0.0 3.7 4 0 0 4 4 4 0 Viral (Superfamily 1) RNA helicase Exo5 PF09810.9 AID33932.1 - 0.25 10.8 0.0 0.38 10.2 0.0 1.2 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease AAA_16 PF13191.6 AID33932.1 - 2.2 8.6 5.7 9.8 6.5 0.0 3.8 3 2 0 3 3 3 0 AAA ATPase domain PDDEXK_1 PF12705.7 AID33933.1 - 3.9e-20 72.8 0.0 7e-20 72.0 0.0 1.4 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily NTP_transf_3 PF12804.7 AID33934.1 - 8.1e-15 55.5 0.3 1.5e-14 54.7 0.3 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 AID33934.1 - 5.4e-13 49.1 0.0 1.2e-12 48.0 0.0 1.5 2 0 0 2 2 2 1 Nucleotidyl transferase IspD PF01128.19 AID33934.1 - 6.1e-05 22.9 0.1 8.8e-05 22.3 0.1 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TsaE PF02367.17 AID33935.1 - 1.6e-33 115.3 0.0 2.6e-33 114.7 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE APH PF01636.23 AID33935.1 - 1.4e-28 100.5 3.2 3.6e-28 99.1 3.2 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family ABC_tran PF00005.27 AID33935.1 - 0.00013 22.5 0.0 0.00025 21.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter EcKinase PF02958.20 AID33935.1 - 0.0016 17.8 0.0 0.04 13.2 0.0 2.1 2 0 0 2 2 2 1 Ecdysteroid kinase AAA_16 PF13191.6 AID33935.1 - 0.0044 17.4 1.2 0.0079 16.6 1.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 AID33935.1 - 0.012 15.5 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 NACHT domain DUF1679 PF07914.11 AID33935.1 - 0.018 14.0 0.0 0.026 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) AAA_29 PF13555.6 AID33935.1 - 0.1 12.3 0.2 0.24 11.1 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RNA_helicase PF00910.22 AID33935.1 - 0.17 12.3 0.0 0.47 10.9 0.0 1.7 2 0 0 2 2 2 0 RNA helicase PAS_7 PF12860.7 AID33936.1 - 4.3e-25 88.1 0.0 1.1e-11 44.9 0.0 3.3 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.26 AID33936.1 - 5.6e-25 88.0 0.0 1.1e-24 87.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID33936.1 - 6e-15 55.0 0.0 6e-15 55.0 0.0 3.5 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 AID33936.1 - 2.7e-12 46.4 0.0 0.0026 17.7 0.0 3.7 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.10 AID33936.1 - 7.1e-10 39.1 1.1 0.033 14.5 0.0 4.0 3 1 0 3 3 3 3 PAS fold PAS PF00989.25 AID33936.1 - 5.8e-05 23.1 0.0 6.9 6.7 0.0 4.0 4 0 0 4 4 4 2 PAS fold HATPase_c_2 PF13581.6 AID33936.1 - 0.0027 17.7 0.7 0.0092 15.9 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID33936.1 - 0.017 15.0 0.0 0.038 13.8 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 AID33936.1 - 0.019 14.9 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 GHKL domain DUF333 PF03891.15 AID33936.1 - 0.094 12.9 0.0 0.35 11.1 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF333) AdoHcyase PF05221.17 AID33937.1 - 5.2e-145 482.2 0.0 5.9e-145 482.0 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 AID33937.1 - 1.8e-81 272.0 2.0 2.6e-81 271.4 2.0 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 AID33937.1 - 1.8e-06 27.6 0.4 3.2e-06 26.8 0.4 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 AID33937.1 - 9e-06 25.2 0.2 1.6e-05 24.3 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID33937.1 - 0.048 13.9 0.2 0.19 12.0 0.2 2.0 1 1 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.6 AID33937.1 - 0.082 13.4 0.4 0.21 12.1 0.4 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 AID33937.1 - 0.3 10.4 2.8 1.4 8.3 2.8 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PTS-HPr PF00381.19 AID33938.1 - 1e-23 83.4 0.1 1.1e-23 83.2 0.1 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site EIIA-man PF03610.16 AID33939.1 - 1.3e-31 109.2 0.6 1.5e-31 109.0 0.6 1.1 1 0 0 1 1 1 1 PTS system fructose IIA component Hpr_kinase_C PF07475.12 AID33940.1 - 1.8e-09 37.4 0.0 2.4e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 HPr Serine kinase C-terminal domain AAA_16 PF13191.6 AID33940.1 - 2.5e-05 24.7 0.2 2.9e-05 24.5 0.2 1.3 1 1 0 1 1 1 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 AID33940.1 - 0.00058 18.9 0.0 0.00071 18.6 0.0 1.1 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 AID33940.1 - 0.00069 19.3 0.2 0.0012 18.5 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 AID33940.1 - 0.01 16.4 0.0 0.014 15.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID33940.1 - 0.011 15.3 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID33940.1 - 0.014 15.7 0.0 0.018 15.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID33940.1 - 0.014 15.3 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 NTPase AAA_28 PF13521.6 AID33940.1 - 0.02 15.2 0.1 0.029 14.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 AID33940.1 - 0.02 14.2 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 AID33940.1 - 0.021 14.8 0.1 0.03 14.3 0.1 1.2 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 AID33940.1 - 0.024 14.8 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 AID33940.1 - 0.028 14.3 0.0 0.041 13.8 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 AID33940.1 - 0.029 14.1 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 AID33940.1 - 0.034 14.0 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 Adenylylsulphate kinase Zeta_toxin PF06414.12 AID33940.1 - 0.034 13.4 0.0 0.052 12.8 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 AID33940.1 - 0.048 14.2 0.2 0.072 13.6 0.2 1.2 1 0 0 1 1 1 0 ABC transporter TIP49 PF06068.13 AID33940.1 - 0.054 12.7 0.1 0.071 12.3 0.1 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain cobW PF02492.19 AID33940.1 - 0.078 12.6 0.2 0.11 12.0 0.2 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 AID33940.1 - 0.089 12.5 1.4 0.51 10.0 1.4 1.8 1 1 1 2 2 2 0 AAA domain T2SSE PF00437.20 AID33940.1 - 0.09 11.8 0.2 0.13 11.3 0.2 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein RsgA_GTPase PF03193.16 AID33940.1 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase CbiA PF01656.23 AID33940.1 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 2 0 0 2 2 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATPase PF06745.13 AID33940.1 - 0.13 11.6 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 AID33940.1 - 0.13 12.0 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 AID33940.1 - 0.14 11.5 0.1 0.61 9.4 0.1 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI PRK PF00485.18 AID33940.1 - 0.15 11.8 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Sigma54_activat PF00158.26 AID33940.1 - 0.16 11.6 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.6 AID33940.1 - 0.18 12.1 0.1 0.24 11.7 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID33940.1 - 0.19 12.2 0.7 0.26 11.8 0.7 1.1 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 AID33940.1 - 0.21 11.4 0.0 0.27 11.0 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_7 PF12775.7 AID33940.1 - 0.31 10.5 0.0 0.44 10.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Stimulus_sens_1 PF13756.6 AID33941.1 - 1.6e-39 134.9 0.0 4.4e-39 133.5 0.0 1.8 1 0 0 1 1 1 1 Stimulus-sensing domain Sensor_TM1 PF13755.6 AID33941.1 - 1.2e-30 105.1 1.0 1.2e-30 105.1 1.0 1.9 2 0 0 2 2 2 1 Sensor N-terminal transmembrane domain HATPase_c PF02518.26 AID33941.1 - 9.1e-20 71.2 0.2 3.1e-19 69.5 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID33941.1 - 1.7e-13 50.4 1.9 3.7e-13 49.3 1.1 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 AID33941.1 - 3.7e-09 36.8 1.1 8.8e-09 35.6 0.5 2.1 2 0 0 2 2 2 1 HAMP domain Baculo_PEP_C PF04513.12 AID33941.1 - 0.12 12.5 0.1 0.31 11.1 0.1 1.7 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HATPase_c_3 PF13589.6 AID33941.1 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 AID33942.1 - 4.8e-29 100.8 0.0 7.8e-29 100.1 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID33942.1 - 7.3e-23 80.4 0.4 1.7e-22 79.3 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal PEPCK_ATP PF01293.20 AID33943.1 - 5.2e-214 711.2 0.0 6e-214 711.0 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_25 PF13481.6 AID33943.1 - 0.036 13.6 0.2 1.3 8.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain RF-1 PF00472.20 AID33944.1 - 7.1e-23 80.8 0.1 9.2e-23 80.4 0.1 1.1 1 0 0 1 1 1 1 RF-1 domain MRP-S28 PF10213.9 AID33944.1 - 0.00078 19.9 0.0 0.001 19.5 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal subunit protein LysM PF01476.20 AID33945.1 - 2.2e-12 46.8 0.4 9e-12 44.9 0.0 2.1 2 0 0 2 2 2 1 LysM domain BON PF04972.17 AID33945.1 - 7.3e-10 39.0 2.6 1e-09 38.5 2.6 1.2 1 0 0 1 1 1 1 BON domain Fer2_2 PF01799.20 AID33946.1 - 0.047 13.7 0.1 0.047 13.7 0.1 1.0 1 0 0 1 1 1 0 [2Fe-2S] binding domain 2OG-FeII_Oxy_2 PF13532.6 AID33947.1 - 1.2e-55 188.7 0.0 1.4e-55 188.5 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Fer2 PF00111.27 AID33948.1 - 9.2e-12 44.8 2.0 1.5e-11 44.1 2.0 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_1 PF00175.21 AID33948.1 - 4.3e-11 43.4 0.0 7.4e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 AID33948.1 - 3.1e-10 40.3 0.0 5.4e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 AID33948.1 - 0.04 14.0 0.0 0.45 10.6 0.0 2.1 2 0 0 2 2 2 0 Ferric reductase NAD binding domain Ring_hydroxyl_A PF00848.19 AID33949.1 - 5.4e-38 131.1 0.1 8.2e-38 130.5 0.1 1.2 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 AID33949.1 - 9.8e-18 63.9 0.1 1.7e-17 63.1 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain DUF680 PF05079.12 AID33951.1 - 1e-12 48.5 3.8 1.3e-12 48.2 3.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF680) CbiN PF02553.15 AID33951.1 - 0.007 16.3 0.2 0.0091 16.0 0.1 1.3 1 1 0 1 1 1 1 Cobalt transport protein component CbiN DUF680 PF05079.12 AID33952.1 - 2.6e-19 69.6 3.2 3.3e-19 69.3 3.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF680) CbiN PF02553.15 AID33952.1 - 0.074 13.0 0.1 0.094 12.7 0.1 1.3 1 0 0 1 1 1 0 Cobalt transport protein component CbiN PepSY_2 PF13670.6 AID33952.1 - 0.11 12.5 1.4 0.14 12.1 1.4 1.4 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain DUF680 PF05079.12 AID33953.1 - 6.7e-23 81.1 1.5 8.3e-23 80.8 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF680) PepSY_2 PF13670.6 AID33953.1 - 0.076 13.0 0.1 0.093 12.7 0.1 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain CbiN PF02553.15 AID33953.1 - 0.1 12.6 0.1 0.16 12.0 0.1 1.4 1 1 0 1 1 1 0 Cobalt transport protein component CbiN ABC_tran PF00005.27 AID33954.1 - 1.2e-32 113.3 0.0 1.8e-32 112.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID33954.1 - 2.5e-10 40.4 0.0 5e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID33954.1 - 2.6e-10 41.0 0.3 1.1e-09 39.0 0.1 2.2 2 1 0 2 2 2 1 MalK OB fold domain AAA_21 PF13304.6 AID33954.1 - 2.5e-06 27.5 0.0 0.0052 16.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID33954.1 - 2.9e-06 26.9 0.1 6.7e-06 25.7 0.1 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID33954.1 - 9.9e-05 22.3 0.2 0.00023 21.1 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase CysA_C_terminal PF17850.1 AID33954.1 - 0.00073 20.0 0.2 0.0076 16.8 0.0 3.0 3 0 0 3 3 2 1 CysA C-terminal regulatory domain AAA_29 PF13555.6 AID33954.1 - 0.0017 18.1 0.1 0.0032 17.2 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID33954.1 - 0.0022 18.4 0.2 0.0038 17.6 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain TOBE PF03459.17 AID33954.1 - 0.0026 18.0 0.0 0.013 15.8 0.0 2.2 2 0 0 2 2 2 1 TOBE domain AAA_23 PF13476.6 AID33954.1 - 0.0027 18.3 0.2 0.0051 17.3 0.2 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID33954.1 - 0.0045 17.2 0.0 0.0075 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID33954.1 - 0.0061 16.7 0.0 0.01 16.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 AID33954.1 - 0.0065 16.1 0.1 0.1 12.2 0.0 2.5 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 AID33954.1 - 0.015 15.7 0.1 0.034 14.6 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 AID33954.1 - 0.02 15.1 0.2 0.052 13.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID33954.1 - 0.03 14.4 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase Rad17 PF03215.15 AID33954.1 - 0.032 14.2 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain NACHT PF05729.12 AID33954.1 - 0.032 14.1 0.0 0.059 13.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_15 PF13175.6 AID33954.1 - 0.036 13.8 0.0 0.047 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 AID33954.1 - 0.047 14.2 0.0 0.075 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 AID33954.1 - 0.06 13.7 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ATPase_2 PF01637.18 AID33954.1 - 0.067 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 AID33954.1 - 0.082 12.1 0.1 0.2 10.8 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.14 AID33954.1 - 0.17 11.9 0.0 0.44 10.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Alpha-amylase PF00128.24 AID33955.1 - 7.8e-91 305.1 0.0 1.1e-90 304.6 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF3459 PF11941.8 AID33955.1 - 1.5e-06 28.4 0.0 3.3e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Malt_amylase_C PF16657.5 AID33955.1 - 3.5e-06 27.0 0.0 7.9e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain Bac_A_amyl_C PF18612.1 AID33955.1 - 0.034 13.9 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial Alpha amylase C-terminal domain BPD_transp_1 PF00528.22 AID33956.1 - 3.3e-15 56.3 22.4 3.3e-15 56.3 22.4 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID33957.1 - 1.4e-13 51.0 20.7 1.4e-13 51.0 20.7 2.1 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component SID-1_RNA_chan PF13965.6 AID33957.1 - 0.33 9.3 4.3 0.7 8.2 4.3 1.5 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SBP_bac_1 PF01547.25 AID33958.1 - 3.5e-22 79.8 12.7 3.5e-22 79.8 12.7 1.9 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein Peripla_BP_3 PF13377.6 AID33961.1 - 6e-28 98.3 1.6 3.1e-27 95.9 0.4 2.3 2 1 1 3 3 3 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID33961.1 - 9.9e-26 90.8 0.0 1.4e-25 90.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 AID33961.1 - 1.9e-10 40.4 0.0 3.4e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 AID33961.1 - 0.00013 21.7 0.0 0.0002 21.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_29 PF13551.6 AID33961.1 - 0.018 15.1 0.1 0.088 12.8 0.1 2.3 1 1 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 AID33961.1 - 0.051 13.6 1.2 0.14 12.1 0.1 2.3 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 AID33961.1 - 0.069 13.2 0.0 0.24 11.5 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix Peptidase_S8 PF00082.22 AID33963.1 - 4.9e-33 114.7 5.7 1.4e-32 113.1 5.7 1.7 1 1 0 1 1 1 1 Subtilase family Sigma70_r2 PF04542.14 AID33965.1 - 3.4e-15 55.6 0.1 7.5e-15 54.5 0.1 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 AID33965.1 - 1.9e-13 49.7 0.0 3.4e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 AID33965.1 - 2.4e-12 46.3 0.0 4.5e-12 45.5 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 AID33965.1 - 8.5e-09 35.5 0.2 4.6e-08 33.2 0.2 1.9 1 1 0 1 1 1 1 ECF sigma factor DUF742 PF05331.11 AID33965.1 - 0.0028 17.5 0.5 0.022 14.6 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF742) GerE PF00196.19 AID33965.1 - 0.028 14.0 0.0 0.053 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 AID33965.1 - 0.24 11.2 1.9 1.1 9.1 0.0 2.8 3 0 0 3 3 3 0 Homeodomain-like domain Phosphodiest PF01663.22 AID33966.1 - 2.2e-15 57.1 0.7 1.3e-14 54.6 0.7 1.9 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 AID33966.1 - 5.3e-06 26.6 0.0 0.072 13.2 0.0 2.2 2 0 0 2 2 2 2 PglZ domain Metalloenzyme PF01676.18 AID33966.1 - 0.0035 16.8 0.5 0.0096 15.3 0.4 1.6 2 0 0 2 2 2 1 Metalloenzyme superfamily SBP_bac_5 PF00496.22 AID33967.1 - 2e-63 214.7 0.5 2.4e-63 214.4 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 AID33967.1 - 0.25 11.2 4.8 0.54 10.2 4.8 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence ABC_tran PF00005.27 AID33968.1 - 3.1e-55 186.4 0.0 5.2e-32 111.2 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID33968.1 - 9.1e-11 42.1 1.3 0.022 14.6 0.0 4.1 4 0 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID33968.1 - 2.1e-09 37.0 1.9 4.4e-05 23.1 0.1 2.8 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.19 AID33968.1 - 5.3e-09 35.8 1.6 6.6e-06 25.7 0.0 3.3 2 2 0 2 2 2 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 AID33968.1 - 1.4e-08 35.1 0.0 0.0021 18.5 0.0 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 AID33968.1 - 1.3e-05 25.4 6.4 0.0011 19.2 0.2 3.6 3 1 0 3 3 2 1 AAA domain RsgA_GTPase PF03193.16 AID33968.1 - 3.7e-05 23.7 1.7 0.062 13.2 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 AID33968.1 - 6e-05 23.6 0.3 0.041 14.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 AID33968.1 - 0.00037 20.9 3.3 0.0064 16.9 0.1 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 AID33968.1 - 0.00088 19.0 0.6 0.15 11.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 AID33968.1 - 0.00099 19.2 0.6 0.075 13.1 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_33 PF13671.6 AID33968.1 - 0.0048 17.1 0.6 0.25 11.5 0.0 2.6 2 1 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 AID33968.1 - 0.0064 15.9 1.4 0.011 15.1 0.0 2.0 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI APS_kinase PF01583.20 AID33968.1 - 0.011 15.6 0.2 0.77 9.6 0.0 2.6 2 0 0 2 2 2 0 Adenylylsulphate kinase PRK PF00485.18 AID33968.1 - 0.012 15.3 1.3 0.58 9.9 0.0 2.7 3 0 0 3 3 3 0 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.6 AID33968.1 - 0.014 15.0 4.8 7.4 6.1 0.1 3.5 4 0 0 4 4 3 0 AAA domain AAA_15 PF13175.6 AID33968.1 - 0.017 14.9 0.1 0.38 10.4 0.0 2.5 3 0 0 3 3 3 0 AAA ATPase domain IstB_IS21 PF01695.17 AID33968.1 - 0.017 14.9 0.3 1.2 8.8 0.0 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF87 PF01935.17 AID33968.1 - 0.019 15.1 1.5 0.12 12.5 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_13 PF13166.6 AID33968.1 - 0.024 13.3 0.1 0.57 8.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 AID33968.1 - 0.03 13.5 1.4 0.5 9.5 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_30 PF13604.6 AID33968.1 - 0.032 14.0 4.1 1.6 8.4 0.0 3.3 3 1 0 3 3 3 0 AAA domain NACHT PF05729.12 AID33968.1 - 0.04 13.8 3.6 0.06 13.3 0.1 2.5 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 AID33968.1 - 0.042 13.6 0.2 0.72 9.5 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_7 PF12775.7 AID33968.1 - 0.05 13.1 0.5 4.3 6.8 0.0 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA PF00004.29 AID33968.1 - 0.054 13.9 0.5 2.4 8.6 0.0 3.1 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Dynamin_N PF00350.23 AID33968.1 - 0.079 13.0 0.1 0.4 10.7 0.0 2.1 2 0 0 2 2 2 0 Dynamin family ATP-synt_ab PF00006.25 AID33968.1 - 0.096 12.3 0.0 8.6 5.9 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 AID33968.1 - 0.11 11.8 2.1 0.55 9.5 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin Roc PF08477.13 AID33968.1 - 0.12 12.6 0.4 7.1 6.9 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_5 PF07728.14 AID33968.1 - 0.13 12.2 4.6 0.62 10.1 0.1 3.3 4 0 0 4 4 4 0 AAA domain (dynein-related subfamily) DUF3987 PF13148.6 AID33968.1 - 0.14 11.2 0.0 0.31 10.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) RNA_helicase PF00910.22 AID33968.1 - 0.22 11.9 0.5 3.3 8.2 0.0 2.4 2 0 0 2 2 2 0 RNA helicase TsaE PF02367.17 AID33968.1 - 0.23 11.5 1.0 6.6 6.7 0.1 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase PF06745.13 AID33968.1 - 1 8.7 3.5 6.2 6.1 0.1 2.4 2 0 0 2 2 2 0 KaiC AAA_18 PF13238.6 AID33968.1 - 8.4 7.0 6.3 4.9 7.7 0.4 2.6 2 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 AID33969.1 - 1.2e-26 93.6 11.9 1.2e-26 93.6 11.9 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID33969.1 - 1.6e-05 24.8 0.4 1.6e-05 24.8 0.4 3.1 3 1 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 AID33970.1 - 9.5e-32 110.2 17.8 9.5e-32 110.2 17.8 1.9 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID33971.1 - 6.7e-67 226.1 0.3 8.1e-67 225.8 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Peptidase_S15 PF02129.18 AID33972.1 - 8.8e-72 241.9 0.1 1.2e-71 241.5 0.1 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) PepX_C PF08530.10 AID33972.1 - 3.3e-64 216.9 0.0 4.7e-64 216.4 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Hydrolase_4 PF12146.8 AID33972.1 - 4.5e-09 35.9 0.1 8.9e-09 35.0 0.1 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 AID33972.1 - 1.2e-08 34.9 0.1 1.1e-07 31.8 0.1 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 AID33972.1 - 1.2e-06 28.2 0.1 2e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 AID33972.1 - 0.0008 20.1 6.2 0.0008 20.1 6.2 2.4 2 1 0 2 2 2 1 Alpha/beta hydrolase family AXE1 PF05448.12 AID33972.1 - 0.0008 18.2 0.0 0.0015 17.2 0.0 1.4 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) DLH PF01738.18 AID33972.1 - 0.0016 18.0 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family FAM212 PF15342.6 AID33972.1 - 0.059 13.2 0.3 0.15 11.9 0.3 1.6 1 0 0 1 1 1 0 FAM212 family DUF1100 PF06500.11 AID33972.1 - 0.068 12.0 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) BAAT_C PF08840.11 AID33972.1 - 0.095 12.6 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal dCMP_cyt_deam_1 PF00383.23 AID33973.1 - 3.9e-09 36.3 0.0 6.1e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 AID33973.1 - 4.9e-07 29.6 0.0 6.9e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase Metal_resist PF13801.6 AID33973.1 - 0.081 13.1 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Heavy-metal resistance PIN_2 PF10130.9 AID33973.1 - 0.12 12.6 0.0 0.34 11.2 0.0 1.7 2 0 0 2 2 2 0 PIN domain Ureidogly_lyase PF04115.12 AID33974.1 - 1e-47 162.3 0.0 1.1e-47 162.2 0.0 1.0 1 0 0 1 1 1 1 Ureidoglycolate lyase Cupin_2 PF07883.11 AID33975.1 - 8.9e-20 70.2 1.0 2.9e-09 36.5 0.1 2.6 3 0 0 3 3 3 2 Cupin domain Cupin_3 PF05899.12 AID33975.1 - 6.9e-16 57.7 0.2 6.1e-12 45.1 0.1 2.7 2 0 0 2 2 2 2 Protein of unknown function (DUF861) AraC_binding PF02311.19 AID33975.1 - 1.5e-05 24.9 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 2 AraC-like ligand binding domain CENP-C_C PF11699.8 AID33975.1 - 0.0039 17.4 0.0 0.037 14.2 0.0 2.0 2 0 0 2 2 2 1 Mif2/CENP-C like DUF2793 PF10983.8 AID33975.1 - 0.048 13.5 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) EutQ PF06249.12 AID33975.1 - 0.22 11.3 0.0 0.76 9.5 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ OHCU_decarbox PF09349.10 AID33976.1 - 3.6e-41 141.2 0.1 7.1e-41 140.3 0.1 1.5 2 0 0 2 2 2 1 OHCU decarboxylase Polysacc_deac_1 PF01522.21 AID33976.1 - 1.5e-13 50.7 0.0 2.8e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Transthyretin PF00576.21 AID33977.1 - 1.2e-35 122.5 0.0 1.4e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 HIUase/Transthyretin family CarboxypepD_reg PF13620.6 AID33977.1 - 0.00039 20.6 0.0 0.00057 20.1 0.0 1.2 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain MG2 PF01835.19 AID33977.1 - 0.13 12.7 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 MG2 domain bMG3 PF11974.8 AID33977.1 - 0.17 11.9 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial alpha-2-macroglobulin MG3 domain FAD_binding_5 PF00941.21 AID33978.1 - 6.2e-51 172.5 0.0 9.9e-51 171.9 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 AID33978.1 - 1.1e-31 109.0 2.0 2e-31 108.2 1.1 1.9 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 AID33978.1 - 2.5e-31 107.5 0.1 5e-31 106.6 0.1 1.5 1 0 0 1 1 1 1 [2Fe-2S] binding domain Fer2 PF00111.27 AID33978.1 - 0.0016 18.4 0.1 0.0016 18.4 0.1 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.18 AID33979.1 - 6.7e-197 655.3 0.6 8.8e-197 654.9 0.6 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 AID33979.1 - 1.9e-30 105.5 0.0 3.1e-29 101.6 0.0 2.9 3 0 0 3 3 3 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XdhC_C PF13478.6 AID33980.1 - 3.7e-29 101.8 0.5 7.8e-29 100.7 0.5 1.5 1 0 0 1 1 1 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 AID33980.1 - 6.5e-15 55.1 0.3 3.7e-14 52.7 0.2 2.2 2 0 0 2 2 2 1 XdhC and CoxI family Pyr_redox_2 PF07992.14 AID33980.1 - 0.016 14.5 0.5 0.036 13.3 0.1 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Bac_luciferase PF00296.20 AID33981.1 - 3.2e-69 233.8 7.5 4.1e-69 233.4 7.5 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Bac_luciferase PF00296.20 AID33982.1 - 1.5e-46 159.3 3.8 1.7e-46 159.1 3.8 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase LysR_substrate PF03466.20 AID33983.1 - 1.2e-42 145.6 0.0 1.7e-42 145.2 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID33983.1 - 1.3e-17 63.4 0.0 2.3e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Urate_ox_N PF06181.11 AID33984.1 - 1.4e-135 451.4 16.0 1.6e-135 451.2 16.0 1.1 1 0 0 1 1 1 1 Urate oxidase N-terminal Cytochrome_CBB3 PF13442.6 AID33984.1 - 0.0056 17.0 0.1 0.012 16.0 0.1 1.5 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III MaAIMP_sms PF16951.5 AID33984.1 - 0.016 14.9 4.8 8.2 6.3 0.0 3.9 4 0 0 4 4 4 0 Putative methionine and alanine importer, small subunit Amidohydro_1 PF01979.20 AID33985.1 - 1.6e-46 159.3 0.0 1.8e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID33985.1 - 1.9e-08 34.2 9.1 5.2e-07 29.5 2.0 2.7 1 1 1 2 2 2 2 Amidohydrolase family DUF2811 PF10929.8 AID33985.1 - 0.041 14.2 0.0 6.9 7.0 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2811) Haem_degrading PF03928.14 AID33986.1 - 3e-28 98.2 0.0 3.7e-28 98.0 0.0 1.1 1 0 0 1 1 1 1 Haem-degrading DUF4130 PF13566.6 AID33987.1 - 1.7e-42 144.9 0.3 2.6e-42 144.3 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4130 UDG PF03167.19 AID33987.1 - 4.1e-39 134.0 0.0 7.6e-39 133.2 0.0 1.5 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Radical_SAM PF04055.21 AID33988.1 - 4.8e-09 36.8 0.0 9.3e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily HHH_3 PF12836.7 AID33988.1 - 2.9e-05 24.2 0.0 6.6e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 AID33988.1 - 0.00079 20.0 0.0 0.0018 18.9 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 AID33988.1 - 0.0098 15.7 0.1 0.023 14.6 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif Gln-synt_C PF00120.24 AID33989.1 - 8.6e-104 347.2 0.0 1e-103 347.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Aminotran_3 PF00202.21 AID33990.1 - 5.4e-42 143.9 0.0 8e-42 143.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III DUF3731 PF12531.8 AID33990.1 - 0.1 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 DNA-K related protein MarR PF01047.22 AID33992.1 - 4e-14 52.3 0.1 7e-14 51.5 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 AID33992.1 - 8e-13 48.1 0.3 1.6e-12 47.1 0.3 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID33992.1 - 7.7e-10 39.1 0.1 1.1e-09 38.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 AID33992.1 - 3.4e-06 26.9 0.0 0.00014 21.7 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 AID33992.1 - 6.4e-05 22.9 0.8 0.00014 21.8 0.6 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 AID33992.1 - 0.00012 21.6 0.0 0.00024 20.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 AID33992.1 - 0.0015 18.1 0.3 0.0028 17.3 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 AID33992.1 - 0.0021 18.2 0.0 0.0031 17.7 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 AID33992.1 - 0.0095 15.9 2.8 0.0097 15.9 1.3 1.9 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 AID33992.1 - 0.037 14.1 0.0 0.61 10.2 0.1 2.3 1 1 1 2 2 2 0 Winged helix-turn helix Rrf2 PF02082.20 AID33992.1 - 0.041 14.2 0.0 0.1 13.0 0.0 1.6 2 0 0 2 2 2 0 Transcriptional regulator LexA_DNA_bind PF01726.16 AID33992.1 - 0.061 13.1 0.3 0.27 11.1 0.2 2.1 1 1 1 2 2 2 0 LexA DNA binding domain HxlR PF01638.17 AID33992.1 - 0.063 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix SpoIIM PF01944.17 AID33993.1 - 0.0034 17.5 4.7 0.0044 17.1 4.7 1.3 1 0 0 1 1 1 1 Stage II sporulation protein M DUF2269 PF10027.9 AID33993.1 - 0.14 12.2 7.7 0.12 12.4 6.0 1.6 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2269) ANAPC4_WD40 PF12894.7 AID33994.1 - 5.1e-12 45.9 0.0 9.1e-05 22.7 0.0 5.0 2 1 4 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 AID33994.1 - 1.7e-09 38.1 2.7 0.64 11.0 0.0 6.2 7 1 0 7 7 7 3 WD domain, G-beta repeat BiPBP_C PF06832.12 AID33994.1 - 0.14 12.2 1.4 16 5.6 0.1 3.0 2 1 1 3 3 3 0 Penicillin-Binding Protein C-terminus Family cobW PF02492.19 AID33996.1 - 1e-61 207.6 0.1 1.3e-61 207.2 0.1 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 AID33996.1 - 6.2e-22 77.3 0.0 1.1e-21 76.6 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 AID33996.1 - 9.4e-06 25.6 0.0 0.035 14.0 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 AID33996.1 - 0.0016 18.7 0.0 0.05 13.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 AID33996.1 - 0.0064 16.6 0.2 0.032 14.3 0.2 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 AID33996.1 - 0.014 14.4 0.6 3.8 6.4 0.0 2.7 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 AID33996.1 - 0.017 15.5 0.0 0.046 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 AID33996.1 - 0.021 14.8 0.0 0.047 13.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 AID33996.1 - 0.041 14.4 0.0 0.083 13.4 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 AID33996.1 - 0.047 14.2 1.8 0.09 13.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 AID33996.1 - 0.067 13.3 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 AID33996.1 - 0.089 12.7 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_23 PF13476.6 AID33996.1 - 0.099 13.1 0.1 0.21 12.1 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID33996.1 - 0.17 11.7 0.2 0.43 10.4 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain Zip PF02535.22 AID33996.1 - 0.36 10.0 4.1 0.47 9.6 4.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter MobB PF03205.14 AID33996.1 - 0.41 10.6 0.0 0.41 10.6 0.0 2.6 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B MarR_2 PF12802.7 AID33997.1 - 1e-12 47.7 0.7 2.7e-12 46.4 0.1 2.0 1 1 1 2 2 2 1 MarR family MarR PF01047.22 AID33997.1 - 1.8e-09 37.4 0.0 4.8e-09 36.0 0.0 1.7 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 AID33997.1 - 3.6e-06 27.1 0.0 7.6e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 AID33997.1 - 1.6e-05 24.8 0.6 9.5e-05 22.4 0.0 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_27 PF13463.6 AID33997.1 - 2.1e-05 24.9 0.0 5.9e-05 23.5 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 AID33997.1 - 0.00015 21.6 0.1 0.00047 20.1 0.1 2.0 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 AID33997.1 - 0.00021 20.8 3.5 0.0004 19.9 0.0 2.7 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID33997.1 - 0.0064 16.5 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix TrmB PF01978.19 AID33997.1 - 0.014 15.3 0.0 0.12 12.3 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB GntR PF00392.21 AID33997.1 - 0.017 14.8 0.0 0.05 13.2 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 AID33997.1 - 0.063 13.1 2.0 0.082 12.7 0.0 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.20 AID33997.1 - 0.11 12.8 0.0 0.4 11.1 0.0 1.9 2 1 0 2 2 2 0 Transcriptional regulator HxlR PF01638.17 AID33997.1 - 0.16 11.8 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix AraC_binding PF02311.19 AID33998.1 - 4.9e-28 97.7 0.3 9.2e-28 96.8 0.3 1.5 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_18 PF12833.7 AID33998.1 - 1.1e-21 76.9 1.8 1.1e-21 76.9 1.8 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID33998.1 - 1e-14 54.2 0.1 7.7e-10 38.6 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Latexin PF06907.12 AID33998.1 - 0.072 12.6 0.1 3.6 7.0 0.0 2.1 1 1 1 2 2 2 0 Latexin DUF2000 PF09391.10 AID33999.1 - 9.1e-45 151.8 0.0 1e-44 151.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2000) PTH2 PF01981.16 AID33999.1 - 0.0019 18.4 0.0 0.003 17.8 0.0 1.3 1 1 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 EamA PF00892.20 AID34000.1 - 1e-15 58.1 33.4 2.7e-09 37.3 12.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family ATPase_gene1 PF09527.10 AID34000.1 - 0.79 9.9 16.2 0.51 10.5 2.9 3.8 3 0 0 3 3 3 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Peripla_BP_3 PF13377.6 AID34001.1 - 1.5e-38 132.7 0.1 2e-38 132.3 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 AID34001.1 - 3.4e-30 105.4 0.0 4e-30 105.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 AID34001.1 - 2.1e-15 57.0 0.0 2.5e-15 56.8 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain 2-Hacid_dh_C PF02826.19 AID34002.1 - 1.6e-43 148.1 0.0 4.8e-43 146.6 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID34002.1 - 7.8e-24 83.9 0.0 9.4e-24 83.6 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 AID34002.1 - 1e-05 25.7 0.1 2e-05 24.8 0.1 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 AID34002.1 - 0.0014 18.9 0.0 0.0089 16.3 0.0 2.2 1 1 1 2 2 2 1 TrkA-N domain F420_oxidored PF03807.17 AID34002.1 - 0.023 15.3 0.1 0.062 13.9 0.1 1.9 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent XdhC_C PF13478.6 AID34002.1 - 0.085 13.4 0.0 0.17 12.4 0.0 1.6 1 1 0 1 1 1 0 XdhC Rossmann domain CoA_binding_2 PF13380.6 AID34002.1 - 0.11 13.0 0.1 0.35 11.4 0.0 1.9 2 0 0 2 2 2 0 CoA binding domain Gp_dh_N PF00044.24 AID34002.1 - 0.25 11.7 0.7 0.54 10.6 0.7 1.5 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF2244 PF10003.9 AID34003.1 - 0.014 15.1 0.3 0.014 15.1 0.3 2.0 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) CoA_binding_3 PF13727.6 AID34003.1 - 0.35 10.9 2.3 0.53 10.3 2.3 1.3 1 0 0 1 1 1 0 CoA-binding domain DUF834 PF05754.14 AID34004.1 - 0.0056 16.7 0.1 0.022 14.8 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF834) Peptidase_C26 PF07722.13 AID34005.1 - 1.4e-74 250.5 0.0 1.6e-74 250.3 0.0 1.0 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 AID34005.1 - 1.6e-13 50.9 0.0 2.6e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 AID34005.1 - 0.13 11.8 0.0 0.33 10.5 0.0 1.7 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF1198 PF06711.11 AID34005.1 - 0.19 11.8 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1198) DctP PF03480.13 AID34006.1 - 7.1e-65 219.2 0.0 8.5e-65 218.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 Trehalase_Ca-bi PF07492.11 AID34006.1 - 0.2 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain Glyoxalase PF00903.25 AID34007.1 - 4.8e-06 26.8 0.0 6.2e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ADH_N PF08240.12 AID34008.1 - 3.6e-36 123.4 0.3 7.8e-36 122.3 0.3 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID34008.1 - 2.3e-28 98.8 0.3 3.8e-28 98.1 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID34008.1 - 3.9e-10 39.6 0.1 5.4e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 AID34008.1 - 1.7e-08 35.6 0.1 3.8e-08 34.5 0.0 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 AID34008.1 - 0.00029 20.2 4.2 0.00042 19.7 4.2 1.3 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DctM PF06808.12 AID34009.1 - 2.9e-129 431.5 54.0 4.8e-128 427.5 54.0 1.9 1 1 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DUF2517 PF10725.9 AID34009.1 - 0.7 9.7 3.6 6.2 6.7 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2517) DctQ PF04290.12 AID34010.1 - 2.7e-23 82.3 6.3 4e-23 81.8 6.3 1.2 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component MpPF26 PF07666.11 AID34010.1 - 0.12 12.5 8.9 0.047 13.8 3.1 2.3 2 1 1 3 3 3 0 M penetrans paralogue family 26 BPD_transp_2 PF02653.16 AID34011.1 - 3.3e-35 121.6 30.4 3.9e-35 121.3 30.4 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF1440 PF07274.12 AID34011.1 - 4.1 7.8 10.0 12 6.3 0.6 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1440) zf-CGNR PF11706.8 AID34012.1 - 2.9e-17 62.2 10.2 5.5e-17 61.3 10.2 1.5 1 0 0 1 1 1 1 CGNR zinc finger ABATE PF07336.11 AID34012.1 - 3.6e-07 30.9 10.3 4.8e-07 30.5 10.3 1.2 1 0 0 1 1 1 1 Putative stress-induced transcription regulator POR PF01558.18 AID34014.1 - 1.3e-25 90.5 1.1 2.1e-25 89.8 1.1 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 AID34014.1 - 8.7e-05 22.3 0.1 0.00035 20.4 0.2 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EAL PF00563.20 AID34015.1 - 1.1e-65 221.5 0.0 1.9e-65 220.7 0.0 1.4 1 0 0 1 1 1 1 EAL domain GGDEF PF00990.21 AID34015.1 - 9.6e-36 123.0 0.0 2.2e-35 121.8 0.0 1.7 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_7 PF12860.7 AID34015.1 - 2.9e-10 40.3 0.0 6.8e-10 39.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 AID34015.1 - 7.2e-06 26.2 0.0 1.6e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID34015.1 - 0.0014 18.8 0.0 0.0042 17.3 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 AID34015.1 - 0.089 12.8 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 PAS fold PhoR PF11808.8 AID34015.1 - 0.38 11.2 1.8 1.5 9.3 1.8 2.0 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR mono-CXXC PF15626.6 AID34015.1 - 2.9 8.3 3.9 0.62 10.5 0.2 1.8 2 0 0 2 2 2 0 single CXXC unit Autoind_synth PF00765.17 AID34016.1 - 0.0018 17.8 0.0 0.0025 17.4 0.0 1.2 1 0 0 1 1 1 1 Autoinducer synthase DUF3096 PF11295.8 AID34017.1 - 1.5e-19 69.3 13.4 1.8e-19 69.1 13.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3096) SLATT_6 PF18169.1 AID34017.1 - 0.0021 17.7 2.1 0.0024 17.5 2.1 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 6 COX4_pro_2 PF07835.12 AID34018.1 - 2.7e-17 62.6 0.1 2.7e-17 62.6 0.1 2.0 2 0 0 2 2 2 1 Bacterial aa3 type cytochrome c oxidase subunit IV AlaDh_PNT_C PF01262.21 AID34019.1 - 2.4e-71 239.4 9.3 4.3e-71 238.6 9.3 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 AID34019.1 - 5.8e-44 149.7 1.1 2.7e-43 147.5 0.1 2.2 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, N-terminal domain 2-Hacid_dh_C PF02826.19 AID34019.1 - 4.8e-05 22.8 1.1 0.1 11.9 0.1 2.7 2 1 1 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 AID34019.1 - 0.00065 19.7 4.1 0.0012 18.9 1.0 2.8 2 1 0 2 2 2 1 Zinc-binding dehydrogenase XdhC_C PF13478.6 AID34019.1 - 0.044 14.3 0.7 0.25 11.8 0.2 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain PNTB_4TM PF12769.7 AID34020.1 - 3.6e-34 117.1 10.8 5.4e-34 116.5 10.8 1.2 1 0 0 1 1 1 1 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF3392 PF11872.8 AID34020.1 - 2.7e-05 24.4 3.5 2.7e-05 24.4 3.5 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3392) PspC PF04024.12 AID34020.1 - 0.066 13.0 0.5 0.066 13.0 0.5 2.2 2 0 0 2 2 2 0 PspC domain Adeno_E3_14_5 PF04834.12 AID34020.1 - 0.069 13.7 0.4 0.11 13.1 0.3 1.4 1 1 0 1 1 1 0 Early E3 14.5 kDa protein YjbE PF11106.8 AID34020.1 - 0.73 10.1 10.9 5.6 7.3 3.9 2.3 2 0 0 2 2 2 0 Exopolysaccharide production protein YjbE DUF485 PF04341.12 AID34020.1 - 8.3 6.4 10.9 9 6.3 9.6 1.7 1 1 0 1 1 1 0 Protein of unknown function, DUF485 PNTB PF02233.16 AID34021.1 - 1.5e-194 647.2 25.2 1.7e-194 647.0 25.2 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit TPP_enzyme_M PF00205.22 AID34021.1 - 0.00014 21.6 0.2 0.00049 19.8 0.2 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain ETF_alpha PF00766.19 AID34021.1 - 0.23 11.5 4.9 6.1 6.9 0.0 2.6 2 0 0 2 2 2 0 Electron transfer flavoprotein FAD-binding domain Bac_DNA_binding PF00216.21 AID34022.1 - 0.19 12.0 0.4 0.32 11.2 0.4 1.3 1 0 0 1 1 1 0 Bacterial DNA-binding protein zf-met PF12874.7 AID34023.1 - 0.011 16.1 0.1 0.02 15.3 0.1 1.5 1 0 0 1 1 1 0 Zinc-finger of C2H2 type PAF-AH_p_II PF03403.13 AID34025.1 - 0.00019 20.1 0.2 0.00033 19.3 0.2 1.3 1 0 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Peptidase_S9 PF00326.21 AID34025.1 - 0.00062 19.3 0.0 0.00096 18.7 0.0 1.5 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 AID34025.1 - 0.006 16.3 0.3 2.5 7.7 0.3 2.4 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID34025.1 - 0.27 10.5 2.1 0.52 9.5 1.2 1.9 2 1 0 2 2 2 0 Serine aminopeptidase, S33 DNA_gyraseB PF00204.25 AID34026.1 - 4.7e-56 189.0 0.0 7.5e-56 188.3 0.0 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 AID34026.1 - 4.7e-29 100.4 0.1 9.4e-29 99.4 0.1 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 AID34026.1 - 4.4e-20 72.3 0.1 9.2e-20 71.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 AID34026.1 - 1.4e-16 60.6 0.0 4.7e-16 58.9 0.0 1.9 2 0 0 2 2 2 1 Toprim domain GyrB_insert PF18053.1 AID34026.1 - 0.0001 22.3 0.0 0.00016 21.6 0.0 1.3 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain HATPase_c_3 PF13589.6 AID34026.1 - 0.0011 18.8 0.1 0.0025 17.7 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3251 PF11622.8 AID34026.1 - 0.05 13.2 0.0 0.094 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) Toprim_4 PF13662.6 AID34026.1 - 0.13 12.8 0.1 0.84 10.1 0.0 2.4 3 0 0 3 3 3 0 Toprim domain Peptidase_C14 PF00656.22 AID34027.1 - 4.1e-31 108.8 0.0 6.6e-31 108.1 0.0 1.3 1 0 0 1 1 1 1 Caspase domain TPR_12 PF13424.6 AID34027.1 - 1e-22 80.2 25.6 2.1e-05 24.7 1.6 9.8 4 3 4 8 8 8 5 Tetratricopeptide repeat TPR_2 PF07719.17 AID34027.1 - 2.7e-17 61.4 12.4 0.29 11.3 0.0 10.7 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_10 PF13374.6 AID34027.1 - 1.3e-14 53.5 16.7 0.0088 15.9 0.2 9.6 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_1 PF00515.28 AID34027.1 - 7.3e-13 47.7 7.4 0.0048 16.7 0.2 9.0 11 0 0 11 11 11 2 Tetratricopeptide repeat TPR_11 PF13414.6 AID34027.1 - 7e-08 32.0 22.2 0.0092 15.6 0.4 7.5 8 0 0 8 8 8 3 TPR repeat TPR_19 PF14559.6 AID34027.1 - 1.6e-07 31.7 39.3 0.49 11.0 0.2 9.3 8 3 1 9 9 9 5 Tetratricopeptide repeat TPR_8 PF13181.6 AID34027.1 - 1.3e-06 28.2 10.1 1.1 9.6 0.1 8.2 9 0 0 9 9 8 2 Tetratricopeptide repeat TPR_7 PF13176.6 AID34027.1 - 0.00011 22.0 15.0 1.2 9.4 0.1 8.1 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_17 PF13431.6 AID34027.1 - 0.00039 20.6 1.1 17 6.0 0.1 6.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 AID34027.1 - 0.0087 16.8 39.8 9.5 7.3 0.2 10.5 9 1 2 11 11 9 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 AID34027.1 - 0.016 14.7 9.9 1.4 8.4 0.1 6.0 6 0 0 6 6 6 0 SHNi-TPR TPR_16 PF13432.6 AID34027.1 - 0.022 15.4 45.7 0.56 10.9 0.7 9.8 6 4 2 8 8 8 0 Tetratricopeptide repeat RPN7 PF10602.9 AID34027.1 - 0.045 13.5 2.4 8.4 6.1 0.1 4.0 2 1 3 5 5 5 0 26S proteasome subunit RPN7 Fis1_TPR_C PF14853.6 AID34027.1 - 2.5 8.2 4.3 5.6 7.1 0.0 3.8 4 0 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat TPR_21 PF09976.9 AID34027.1 - 2.5 7.8 23.0 0.97 9.1 1.4 5.5 5 1 1 6 6 6 0 Tetratricopeptide repeat-like domain FMN_red PF03358.15 AID34028.1 - 8.5e-30 103.5 0.0 1.3e-29 102.9 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID34028.1 - 7.3e-05 22.6 0.0 9.2e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold preATP-grasp_3 PF18301.1 AID34028.1 - 0.0012 19.1 0.0 0.0023 18.2 0.0 1.4 1 0 0 1 1 1 1 pre ATP-grasp 3 domain p450 PF00067.22 AID34029.1 - 1.3e-73 248.3 0.0 1.7e-73 248.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Epimerase PF01370.21 AID34030.1 - 1.4e-15 57.4 0.1 8e-15 54.9 0.1 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 AID34030.1 - 6.4e-15 54.9 0.0 6.8e-08 31.8 0.0 2.1 1 1 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 AID34030.1 - 6.2e-13 48.5 0.0 2.1e-11 43.5 0.0 2.1 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 AID34030.1 - 3.8e-10 39.9 1.1 6.2e-10 39.3 1.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 AID34030.1 - 3.4e-07 30.1 0.2 6.8e-07 29.1 0.2 1.6 1 1 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 AID34030.1 - 5.8e-06 25.7 0.1 0.0064 15.7 0.0 2.2 1 1 0 2 2 2 2 Male sterility protein adh_short PF00106.25 AID34030.1 - 2.8e-05 23.7 0.1 4e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 AID34030.1 - 0.0001 22.6 0.1 0.00032 21.0 0.1 1.8 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 AID34030.1 - 0.00016 21.2 0.0 0.00039 19.9 0.0 1.6 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Glyco_trans_4_4 PF13579.6 AID34030.1 - 0.00018 22.0 4.2 0.00038 20.9 4.2 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain KR PF08659.10 AID34030.1 - 0.026 14.5 0.3 0.041 13.8 0.3 1.3 1 0 0 1 1 1 0 KR domain Glyco_transf_4 PF13439.6 AID34030.1 - 0.029 14.4 1.5 0.049 13.6 1.5 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 AID34030.1 - 0.059 13.4 0.0 0.093 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like XdhC_C PF13478.6 AID34030.1 - 0.081 13.4 0.3 0.49 10.9 0.2 2.1 2 1 0 2 2 2 0 XdhC Rossmann domain DoxX PF07681.12 AID34031.1 - 4.1e-15 56.1 8.7 4.1e-15 56.1 8.7 1.4 2 0 0 2 2 2 1 DoxX Form-deh_trans PF09163.11 AID34031.1 - 0.022 14.5 1.1 0.022 14.5 1.1 2.2 3 0 0 3 3 3 0 Formate dehydrogenase N, transmembrane DoxD PF04173.13 AID34031.1 - 0.022 14.7 2.1 0.032 14.1 2.1 1.3 1 0 0 1 1 1 0 TQO small subunit DoxD GTA_holin_3TM PF11351.8 AID34031.1 - 0.52 10.9 2.9 2.4 8.7 0.1 2.1 1 1 1 2 2 2 0 Holin of 3TMs, for gene-transfer release FUSC-like PF12805.7 AID34031.1 - 1.1 8.3 3.8 1.3 8.0 3.8 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS HTH_18 PF12833.7 AID34032.1 - 6.8e-21 74.3 0.9 1.2e-20 73.6 0.9 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DJ-1_PfpI PF01965.24 AID34032.1 - 5.7e-19 68.5 0.0 8.2e-19 68.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AraC PF00165.23 AID34032.1 - 1.5e-12 47.3 0.0 9.7e-08 31.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DJ-1_PfpI PF01965.24 AID34033.1 - 3.3e-18 66.0 0.0 1.3e-17 64.0 0.1 1.8 2 0 0 2 2 2 1 DJ-1/PfpI family Ldh_2 PF02615.14 AID34034.1 - 1.6e-83 280.6 3.9 1.8e-83 280.5 3.9 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase BPD_transp_1 PF00528.22 AID34035.1 - 7.9e-14 51.8 7.9 7.9e-14 51.8 7.9 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component E1-E2_ATPase PF00122.20 AID34035.1 - 0.13 11.8 3.8 0.31 10.6 3.8 1.6 1 0 0 1 1 1 0 E1-E2 ATPase DUF2227 PF09988.9 AID34035.1 - 0.32 10.9 7.5 2.9 7.7 0.1 3.1 4 0 0 4 4 4 0 Uncharacterized metal-binding protein (DUF2227) BPD_transp_1 PF00528.22 AID34036.1 - 3e-20 72.7 12.7 3.8e-20 72.4 12.7 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ATP-synt_J PF04911.12 AID34036.1 - 0.17 11.5 0.9 8.1 6.1 0.2 2.6 2 0 0 2 2 2 0 ATP synthase j chain Caps_synth_CapC PF14102.6 AID34036.1 - 0.44 11.0 11.6 0.43 11.0 4.5 2.4 2 1 0 2 2 2 0 Capsule biosynthesis CapC SBP_bac_3 PF00497.20 AID34037.1 - 2.4e-60 203.8 0.1 2.7e-60 203.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID34037.1 - 4.9e-10 39.6 0.0 1.9e-09 37.7 0.0 1.8 1 1 1 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 AID34037.1 - 0.0027 17.7 0.2 0.0066 16.4 0.2 1.6 1 1 0 1 1 1 1 NMT1/THI5 like ABC_tran PF00005.27 AID34038.1 - 1.2e-34 119.7 0.0 1.7e-34 119.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34038.1 - 1.3e-12 48.1 0.1 3.4e-06 27.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34038.1 - 8.7e-07 28.6 0.1 3.5e-05 23.4 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34038.1 - 0.00015 21.5 0.1 0.00028 20.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 AID34038.1 - 0.00052 18.9 0.1 0.3 9.9 0.1 2.2 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_16 PF13191.6 AID34038.1 - 0.0014 19.0 0.3 0.0043 17.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID34038.1 - 0.0029 18.2 0.0 0.004 17.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 AID34038.1 - 0.0069 15.1 0.0 1.6 7.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.6 AID34038.1 - 0.011 15.5 0.0 0.14 11.8 0.0 1.9 1 1 1 2 2 2 0 AAA ATPase domain AAA_28 PF13521.6 AID34038.1 - 0.014 15.6 0.0 0.034 14.4 0.0 1.7 2 0 0 2 2 1 0 AAA domain RsgA_GTPase PF03193.16 AID34038.1 - 0.016 15.1 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 AID34038.1 - 0.039 14.2 0.1 0.11 12.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 AID34038.1 - 0.045 12.9 0.0 0.045 12.9 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_19 PF13245.6 AID34038.1 - 0.065 13.6 0.2 0.091 13.1 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID34038.1 - 0.07 12.8 0.1 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 AID34038.1 - 0.13 11.6 0.0 0.22 10.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 AID34038.1 - 0.13 12.2 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 NACHT domain PRK PF00485.18 AID34038.1 - 0.19 11.5 0.1 0.38 10.5 0.0 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Amidinotransf PF02274.17 AID34039.1 - 4.4e-47 160.8 0.0 1e-45 156.3 0.0 2.0 1 1 0 1 1 1 1 Amidinotransferase TetR_C_6 PF13977.6 AID34040.1 - 1.1e-21 77.1 0.9 1.1e-21 77.1 0.9 2.4 2 1 1 3 3 3 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 AID34040.1 - 9.8e-13 47.7 0.1 1.9e-12 46.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TPP_enzyme_N PF02776.18 AID34041.1 - 1.2e-58 197.6 0.6 2.9e-53 180.0 0.1 2.7 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 AID34041.1 - 1.6e-35 122.1 0.1 5e-34 117.3 0.0 3.3 4 0 0 4 4 4 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 AID34041.1 - 9.9e-28 96.6 0.3 3.1e-27 95.0 0.1 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 AID34041.1 - 0.11 12.2 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit adh_short PF00106.25 AID34042.1 - 9.3e-20 70.9 0.1 1.1e-19 70.7 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID34042.1 - 6e-11 42.3 0.1 6.9e-11 42.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID34042.1 - 3.4e-06 27.1 0.6 8.6e-06 25.8 0.6 1.7 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID34042.1 - 1e-05 25.2 0.1 1.2e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID34042.1 - 0.00012 22.0 0.3 0.00014 21.8 0.3 1.1 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 AID34042.1 - 0.015 14.7 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 AID34042.1 - 0.025 13.6 0.0 0.027 13.5 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short_C2 PF13561.6 AID34043.1 - 5.2e-12 45.8 2.8 2.1e-11 43.9 2.8 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34043.1 - 5.1e-10 39.1 0.2 7e-10 38.7 0.2 1.3 1 0 0 1 1 1 1 short chain dehydrogenase DUF998 PF06197.13 AID34044.1 - 0.00091 18.9 17.0 0.00091 18.9 17.0 4.5 2 2 1 3 3 3 1 Protein of unknown function (DUF998) ResB PF05140.14 AID34044.1 - 0.15 10.8 0.3 0.21 10.3 0.3 1.2 1 0 0 1 1 1 0 ResB-like family DUF5337 PF17272.2 AID34044.1 - 2.1 8.2 11.8 0.27 11.1 3.3 3.3 3 0 0 3 3 3 0 Family of unknown function (DUF5337) S1 PF00575.23 AID34045.1 - 1.8e-104 342.2 31.9 2.6e-21 75.7 0.3 6.1 6 0 0 6 6 6 6 S1 RNA binding domain PCB_OB PF17092.5 AID34045.1 - 3.2e-09 37.5 4.0 0.21 12.3 0.0 6.2 2 2 3 5 5 5 2 Penicillin-binding protein OB-like domain S1_2 PF13509.6 AID34045.1 - 2.4e-06 27.5 11.9 0.46 10.6 0.0 6.0 5 1 1 6 6 6 3 S1 domain DUF2110 PF09883.9 AID34045.1 - 0.0036 16.9 7.9 0.4 10.2 0.1 4.6 3 3 0 5 5 5 1 Uncharacterized protein conserved in archaea (DUF2110) RNase_II_C_S1 PF18614.1 AID34045.1 - 0.012 15.5 7.2 2.8 7.9 0.1 5.7 6 0 0 6 6 6 0 RNase II-type exonuclease C-terminal S1 domain BPL_C PF02237.17 AID34045.1 - 0.012 15.4 7.4 1.3 8.9 0.1 4.2 4 0 0 4 4 4 0 Biotin protein ligase C terminal domain MRP-S35 PF10246.9 AID34045.1 - 0.086 12.8 2.8 1.3 9.0 0.0 3.6 5 0 0 5 5 5 0 Mitochondrial ribosomal protein MRP-S35 RuvA_N PF01330.21 AID34045.1 - 0.32 11.1 6.4 1.2 9.3 0.2 3.5 3 0 0 3 3 3 0 RuvA N terminal domain EXOSC1 PF10447.9 AID34045.1 - 5.3 7.7 8.7 22 5.7 0.1 3.9 4 2 0 4 4 4 0 Exosome component EXOSC1/CSL4 Cytidylate_kin PF02224.18 AID34046.1 - 3.9e-56 190.1 1.0 9e-56 188.9 1.0 1.5 1 1 0 1 1 1 1 Cytidylate kinase Cytidylate_kin2 PF13189.6 AID34046.1 - 1.3e-05 25.4 0.3 2.1e-05 24.8 0.3 1.3 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_17 PF13207.6 AID34046.1 - 1.9e-05 25.1 0.0 7.1e-05 23.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 AID34046.1 - 2.9e-05 24.6 0.0 5.7e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 AID34046.1 - 0.0018 18.4 0.1 0.0048 17.0 0.0 1.7 2 0 0 2 2 2 1 Adenylate kinase AAA_33 PF13671.6 AID34046.1 - 0.016 15.3 0.0 0.037 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 AID34046.1 - 0.03 14.3 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 AID34046.1 - 0.066 13.5 0.0 0.13 12.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID34046.1 - 0.069 13.4 0.1 0.14 12.4 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID34046.1 - 0.083 13.3 0.5 0.11 12.8 0.5 1.4 1 1 0 1 1 1 0 AAA ATPase domain CoaE PF01121.20 AID34046.1 - 0.084 12.5 0.1 0.17 11.5 0.0 1.6 2 0 0 2 2 2 0 Dephospho-CoA kinase dNK PF01712.19 AID34046.1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Deoxynucleoside kinase SKI PF01202.22 AID34046.1 - 0.13 12.3 0.0 0.33 11.0 0.0 1.6 1 0 0 1 1 1 0 Shikimate kinase EPSP_synthase PF00275.20 AID34047.1 - 4.2e-99 332.1 0.0 4.7e-99 331.9 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FYDLN_acid PF09538.10 AID34049.1 - 2.7e-28 98.7 8.0 2.7e-28 98.7 8.0 1.9 1 1 1 2 2 2 1 Protein of unknown function (FYDLN_acid) Bac_luciferase PF00296.20 AID34051.1 - 2.8e-86 289.8 1.2 3.5e-86 289.5 1.2 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Psu PF07455.11 AID34051.1 - 0.096 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Phage polarity suppression protein (Psu) Radical_SAM PF04055.21 AID34051.1 - 0.2 12.1 0.1 4.1 7.8 0.0 2.4 2 1 0 2 2 2 0 Radical SAM superfamily NAD_binding_9 PF13454.6 AID34052.1 - 5.8e-34 117.3 0.4 4.9e-33 114.3 0.0 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID34052.1 - 5.5e-11 42.5 0.1 2.2e-08 34.2 0.0 2.8 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 AID34052.1 - 2.2e-08 33.6 0.0 0.00036 19.8 0.0 3.0 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 AID34052.1 - 6.5e-07 29.3 7.5 1.3e-05 25.0 0.1 3.8 3 1 1 4 4 4 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID34052.1 - 5.6e-05 22.5 0.1 0.00037 19.8 0.1 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID34052.1 - 0.00089 19.8 0.1 0.38 11.3 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID34052.1 - 0.082 12.1 0.0 0.19 10.9 0.0 1.5 1 0 0 1 1 1 0 Thi4 family Bac_luciferase PF00296.20 AID34053.1 - 1.1e-68 232.0 0.7 1.4e-68 231.7 0.7 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase ABC_tran PF00005.27 AID34054.1 - 1.2e-27 97.1 0.0 1.6e-27 96.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 AID34054.1 - 6.8e-11 41.8 0.1 1.6e-10 40.7 0.1 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 AID34054.1 - 0.0003 20.7 1.4 0.001 18.9 0.1 2.0 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 AID34054.1 - 0.0013 18.4 0.0 0.0027 17.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 AID34054.1 - 0.0028 18.2 0.0 0.0039 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID34054.1 - 0.0047 16.8 0.0 0.0079 16.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 AID34054.1 - 0.0049 16.3 0.1 0.0097 15.4 0.1 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 AID34054.1 - 0.033 13.9 0.1 0.36 10.5 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 AID34054.1 - 0.042 13.4 0.0 0.11 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID34054.1 - 0.05 13.7 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 AID34054.1 - 0.066 12.9 0.0 0.093 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain BPD_transp_2 PF02653.16 AID34055.1 - 6.6e-27 94.3 42.0 7.8e-27 94.1 42.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID34056.1 - 2e-33 115.7 37.8 3e-33 115.1 37.8 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component CPT_N PF16484.5 AID34056.1 - 0.083 12.9 0.0 0.25 11.4 0.0 1.8 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus Peripla_BP_6 PF13458.6 AID34057.1 - 2.2e-73 247.9 0.1 2.7e-73 247.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein TraF PF13728.6 AID34057.1 - 0.14 12.0 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein ABC_tran PF00005.27 AID34058.1 - 4e-24 85.7 0.0 6.4e-24 85.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34058.1 - 1.6e-10 41.3 0.5 3.6e-05 23.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34058.1 - 5e-06 26.8 0.0 1.4e-05 25.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID34058.1 - 0.0001 22.7 0.2 0.00022 21.6 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID34058.1 - 0.00036 20.2 0.1 0.00091 18.9 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 AID34058.1 - 0.0025 17.5 0.6 0.011 15.5 0.4 2.1 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 AID34058.1 - 0.038 13.6 0.2 0.071 12.7 0.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Rad17 PF03215.15 AID34058.1 - 0.065 13.2 0.0 0.099 12.6 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_19 PF13245.6 AID34058.1 - 0.076 13.3 0.1 0.34 11.2 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 AID34058.1 - 0.08 12.5 0.1 0.17 11.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID34058.1 - 0.22 12.0 0.0 0.36 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 AID34058.1 - 0.3 8.6 0.2 0.41 8.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Acyl-CoA_dh_2 PF08028.11 AID34059.1 - 4.4e-28 98.2 7.2 8.2e-28 97.3 7.2 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 AID34059.1 - 3.2e-09 37.2 1.4 6e-09 36.3 1.4 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 AID34059.1 - 6e-08 33.3 0.1 4.4e-07 30.5 0.0 2.4 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 AID34059.1 - 3.2e-07 30.4 0.0 8.3e-07 29.1 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain ATLF PF07737.11 AID34059.1 - 0.00073 18.9 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 Anthrax toxin lethal factor, N- and C-terminal domain FMN_red PF03358.15 AID34060.1 - 6.9e-29 100.6 0.0 8.6e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 AID34060.1 - 1.7e-07 31.2 0.0 3.3e-07 30.2 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin-like fold PS_pyruv_trans PF04230.13 AID34060.1 - 0.17 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase EHN PF06441.12 AID34062.1 - 4.4e-35 120.3 0.1 7.4e-35 119.6 0.1 1.4 1 0 0 1 1 1 1 Epoxide hydrolase N terminus Abhydrolase_1 PF00561.20 AID34062.1 - 2.7e-13 50.2 0.8 3.5e-13 49.8 0.2 1.6 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID34062.1 - 1.9e-10 41.8 4.0 1.9e-10 41.8 4.0 2.0 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID34062.1 - 8.2e-05 22.0 0.5 0.00045 19.6 0.2 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 AID34062.1 - 0.14 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family HTH_18 PF12833.7 AID34063.1 - 5.5e-14 52.2 0.0 9e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 AID34063.1 - 0.02 15.0 0.1 2.4 8.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family Peripla_BP_1 PF00532.21 AID34063.1 - 0.08 12.3 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family SoxG PF04268.12 AID34064.1 - 0.0012 19.0 0.1 0.0019 18.3 0.1 1.3 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family GCV_T PF01571.21 AID34065.1 - 7.2e-61 205.8 0.0 1.2e-60 205.0 0.0 1.3 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain SO_alpha_A3 PF17806.1 AID34065.1 - 1.8e-33 114.7 0.0 6e-33 113.0 0.0 2.0 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_4 PF13510.6 AID34065.1 - 1.4e-26 92.3 0.0 1.1e-25 89.4 0.0 2.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain GCV_T_C PF08669.11 AID34065.1 - 4.3e-18 65.0 1.4 1.1e-16 60.5 0.0 3.5 4 0 0 4 4 4 1 Glycine cleavage T-protein C-terminal barrel domain Pyr_redox_2 PF07992.14 AID34065.1 - 1e-15 57.8 0.2 1.3e-14 54.2 0.2 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID34065.1 - 1.3e-07 31.2 0.2 0.0054 16.0 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID34065.1 - 3.2e-07 30.5 2.6 9.4e-06 25.8 0.6 2.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID34065.1 - 1.5e-06 27.9 3.6 3.4e-06 26.7 3.6 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 AID34065.1 - 1.7e-06 27.9 7.0 6.4e-06 26.0 7.0 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 AID34065.1 - 8.5e-06 25.2 1.4 1.8e-05 24.2 0.6 1.8 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 AID34065.1 - 1.3e-05 25.6 1.0 0.021 15.4 0.2 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID34065.1 - 2.5e-05 23.2 0.5 4.1e-05 22.5 0.5 1.3 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_2 PF00890.24 AID34065.1 - 4e-05 22.9 2.4 0.00012 21.3 2.4 1.8 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 AID34065.1 - 0.00022 20.6 0.2 0.00047 19.5 0.2 1.5 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 AID34065.1 - 0.00061 19.1 1.3 0.0011 18.3 0.3 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 AID34065.1 - 0.00071 18.7 1.4 0.0039 16.3 0.7 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein NAD_binding_7 PF13241.6 AID34065.1 - 0.0016 18.9 0.3 2.2 8.8 0.0 2.6 2 0 0 2 2 2 2 Putative NAD(P)-binding XdhC_C PF13478.6 AID34065.1 - 0.0035 17.8 0.3 0.085 13.4 0.0 2.5 2 0 0 2 2 2 1 XdhC Rossmann domain 3HCDH_N PF02737.18 AID34065.1 - 0.005 16.7 1.7 0.4 10.5 0.5 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 AID34065.1 - 0.014 14.5 3.6 0.02 14.0 1.1 2.3 2 1 1 3 3 3 0 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.14 AID34065.1 - 0.024 14.2 0.1 1.4 8.5 0.1 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 AID34065.1 - 0.062 12.7 0.3 0.17 11.3 0.0 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PALP PF00291.25 AID34065.1 - 0.091 12.2 2.7 5.5 6.3 0.3 2.5 2 0 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme NAD_binding_9 PF13454.6 AID34065.1 - 0.12 12.4 0.6 2.7 8.0 0.3 2.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding DFP PF04127.15 AID34065.1 - 0.4 10.5 2.0 3.8 7.3 0.1 2.3 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein SoxD PF04267.12 AID34066.1 - 8.9e-30 102.6 0.0 9.8e-30 102.5 0.0 1.0 1 0 0 1 1 1 1 Sarcosine oxidase, delta subunit family Lar_restr_allev PF14354.6 AID34066.1 - 4.8e-05 23.6 0.0 6e-05 23.3 0.0 1.2 1 1 0 1 1 1 1 Restriction alleviation protein Lar DAO PF01266.24 AID34067.1 - 7.2e-58 196.8 1.7 8.3e-58 196.6 1.7 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID34067.1 - 8e-07 28.5 2.9 0.0039 16.3 1.0 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 AID34067.1 - 1e-06 28.8 0.7 2.9e-06 27.4 0.7 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 AID34067.1 - 3.7e-05 23.1 0.5 0.0001 21.7 0.4 1.7 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.7 AID34067.1 - 0.00056 19.4 0.2 0.0056 16.1 0.1 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 AID34067.1 - 0.0029 17.0 0.1 1.7 8.0 0.0 2.1 2 0 0 2 2 2 2 GMC oxidoreductase Pyr_redox_3 PF13738.6 AID34067.1 - 0.0038 16.5 1.3 0.012 14.8 1.9 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 AID34067.1 - 0.35 10.1 1.6 1.9 7.7 1.6 1.9 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID34067.1 - 0.35 9.5 1.5 1.9 7.1 0.6 2.0 2 0 0 2 2 2 0 HI0933-like protein Trp_halogenase PF04820.14 AID34067.1 - 0.81 8.5 3.5 0.27 10.0 0.9 1.4 2 0 0 2 2 2 0 Tryptophan halogenase DAO PF01266.24 AID34068.1 - 2.9e-59 201.4 4.4 4.4e-59 200.8 4.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GCV_T PF01571.21 AID34068.1 - 9.9e-59 198.8 0.0 1.4e-58 198.3 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 AID34068.1 - 1.6e-17 63.2 0.2 4.3e-17 61.8 0.2 1.8 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 AID34068.1 - 2.8e-17 62.8 0.1 6.1e-17 61.7 0.1 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain SoxG PF04268.12 AID34068.1 - 3.1e-07 30.6 0.0 8.4e-07 29.2 0.0 1.8 1 0 0 1 1 1 1 Sarcosine oxidase, gamma subunit family Pyr_redox_3 PF13738.6 AID34068.1 - 0.00059 19.2 0.0 0.19 10.9 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID34068.1 - 0.0073 16.8 1.3 0.38 11.3 0.6 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID34068.1 - 0.015 14.5 0.2 0.027 13.7 0.2 1.3 1 0 0 1 1 1 0 Thi4 family Pyr_redox_2 PF07992.14 AID34068.1 - 0.046 12.9 1.0 1.1 8.5 0.3 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID34068.1 - 0.094 12.7 3.7 3.8 7.5 0.1 3.5 3 0 0 3 3 3 0 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 AID34068.1 - 0.44 10.8 2.2 1.5 9.1 0.9 2.7 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain TetR_N PF00440.23 AID34069.1 - 4.2e-09 36.1 0.0 1.3e-07 31.3 0.0 2.8 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 AID34069.1 - 0.0079 16.4 1.3 0.0079 16.4 1.3 2.4 2 1 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain EF-hand_9 PF14658.6 AID34069.1 - 0.06 13.7 0.0 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 EF-hand domain REV1_C PF16727.5 AID34069.1 - 0.066 13.6 0.0 0.8 10.1 0.0 2.3 2 0 0 2 2 2 0 DNA repair protein REV1 C-terminal domain RasGEF_N PF00618.20 AID34069.1 - 0.093 13.0 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 RasGEF N-terminal motif Aldedh PF00171.22 AID34070.1 - 2.4e-159 530.8 0.2 2.7e-159 530.6 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1349 PF07081.11 AID34071.1 - 6.9e-65 218.1 0.0 7.7e-65 217.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1349) GH43_C2 PF17851.1 AID34071.1 - 0.00021 21.1 0.0 0.0003 20.6 0.0 1.3 1 1 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain DUF5619 PF18505.1 AID34072.1 - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5619) UDPGT PF00201.18 AID34072.1 - 0.13 11.0 0.0 0.17 10.6 0.0 1.1 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_2 PF13524.6 AID34073.1 - 0.044 14.2 0.0 0.072 13.5 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferases group 1 Anp1 PF03452.14 AID34074.1 - 9.7e-34 117.0 0.0 1.7e-33 116.1 0.0 1.3 1 1 0 1 1 1 1 Anp1 Gly_transf_sug PF04488.15 AID34074.1 - 8.3e-16 58.4 0.0 1.5e-15 57.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif Caps_synth PF05704.12 AID34074.1 - 0.0086 15.5 0.0 0.013 14.9 0.0 1.1 1 0 0 1 1 1 1 Capsular polysaccharide synthesis protein Glyco_tranf_2_4 PF13704.6 AID34074.1 - 0.027 15.0 0.3 0.089 13.3 0.3 1.9 1 0 0 1 1 1 0 Glycosyl transferase family 2 TcdA_TcdB PF12919.7 AID34074.1 - 0.032 13.5 0.4 6.4 6.0 0.1 2.1 2 0 0 2 2 2 0 TcdA/TcdB catalytic glycosyltransferase domain Glyco_trans_1_4 PF13692.6 AID34075.1 - 1.4e-22 80.5 0.1 2.3e-22 79.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 AID34075.1 - 3.6e-10 40.5 8.5 6.7e-10 39.6 3.0 3.1 2 2 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 AID34075.1 - 3.8e-08 33.5 0.1 1e-07 32.1 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 AID34075.1 - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 AID34075.1 - 2.9e-07 30.8 0.0 7.7e-07 29.4 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Pyr_redox_2 PF07992.14 AID34076.1 - 3.4e-59 200.5 0.8 4.7e-59 200.0 0.8 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 AID34076.1 - 8.8e-27 93.6 0.3 1.9e-26 92.4 0.3 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 AID34076.1 - 1.6e-21 76.6 0.7 1.2e-15 57.9 0.0 3.0 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID34076.1 - 6.1e-12 45.4 0.4 1.3e-05 24.6 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 AID34076.1 - 2.7e-10 40.2 5.1 1.2e-06 28.1 0.5 3.2 2 1 1 3 3 3 3 FAD dependent oxidoreductase GIDA PF01134.22 AID34076.1 - 7.3e-09 35.2 3.5 4.5e-05 22.7 2.5 2.6 2 1 0 2 2 2 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID34076.1 - 5.6e-07 29.1 0.9 0.00098 18.5 1.1 2.5 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 AID34076.1 - 3.1e-06 26.2 9.8 6.7e-05 21.8 2.7 3.2 2 1 1 3 3 3 2 HI0933-like protein FAD_binding_3 PF01494.19 AID34076.1 - 3.5e-06 26.5 8.1 0.024 13.9 0.4 3.2 2 1 1 3 3 3 2 FAD binding domain Thi4 PF01946.17 AID34076.1 - 8.2e-06 25.2 0.5 2.2e-05 23.8 0.5 1.7 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 AID34076.1 - 6.3e-05 23.1 2.5 0.00055 20.1 0.6 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID34076.1 - 8.1e-05 22.4 16.3 0.00038 20.1 3.7 3.6 2 2 2 4 4 4 2 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 AID34076.1 - 0.00015 22.2 0.3 0.15 12.5 0.0 2.7 3 0 0 3 3 2 2 Putative NAD(P)-binding FAD_binding_2 PF00890.24 AID34076.1 - 0.00029 20.1 11.8 0.0023 17.1 6.4 3.1 3 0 0 3 3 3 1 FAD binding domain Amino_oxidase PF01593.24 AID34076.1 - 0.0084 15.4 0.9 0.052 12.8 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 AID34076.1 - 0.0099 15.8 1.6 0.51 10.2 0.0 2.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID34076.1 - 0.02 14.0 4.0 0.091 11.8 1.3 2.4 2 0 0 2 2 2 0 Lycopene cyclase protein XdhC_C PF13478.6 AID34076.1 - 0.031 14.8 0.1 9.2 6.8 0.0 2.6 2 0 0 2 2 2 0 XdhC Rossmann domain 2-Hacid_dh_C PF02826.19 AID34076.1 - 0.043 13.2 0.1 12 5.3 0.1 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glycoamylase PF10091.9 AID34077.1 - 3.4e-86 288.4 0.3 6.3e-86 287.5 0.1 1.5 2 0 0 2 2 2 1 Putative glucoamylase adh_short_C2 PF13561.6 AID34078.1 - 3e-56 190.6 2.9 3.5e-56 190.4 2.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34078.1 - 2e-55 187.3 2.6 2.3e-55 187.1 2.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID34078.1 - 5.8e-09 36.1 0.2 1.1e-08 35.3 0.2 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID34078.1 - 3.6e-06 26.6 0.1 1.2e-05 24.9 0.1 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NRho PF16733.5 AID34078.1 - 0.02 14.9 0.0 0.039 14.0 0.0 1.4 1 0 0 1 1 1 0 Rhomboid N-terminal domain TrkA_N PF02254.18 AID34078.1 - 0.03 14.6 1.1 0.057 13.7 0.4 1.7 2 0 0 2 2 2 0 TrkA-N domain HATPase_c PF02518.26 AID34078.1 - 0.1 13.1 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GerE PF00196.19 AID34079.1 - 5.6e-12 45.0 0.0 9.7e-12 44.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID34079.1 - 6.9e-09 35.3 0.0 1.4e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID34079.1 - 3e-05 23.4 0.2 6.1e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_28 PF13518.6 AID34079.1 - 0.00085 19.4 0.5 0.0056 16.8 0.1 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34079.1 - 0.0011 18.6 1.1 0.0039 16.9 0.1 2.4 3 0 0 3 3 3 1 Homeodomain-like domain HTH_24 PF13412.6 AID34079.1 - 0.0051 16.3 0.0 0.077 12.6 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 AID34079.1 - 0.01 15.8 0.0 0.035 14.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_7 PF02796.15 AID34079.1 - 0.011 15.8 0.0 0.072 13.2 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Hydantoinase_A PF01968.18 AID34080.1 - 5.2e-84 282.0 0.6 5.4e-82 275.3 0.0 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 AID34080.1 - 1.3e-46 158.6 0.1 7.1e-46 156.2 0.0 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region BcrAD_BadFG PF01869.20 AID34080.1 - 0.011 15.3 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family RTC_insert PF05189.13 AID34080.1 - 0.13 12.8 0.3 0.54 10.8 0.1 2.1 2 0 0 2 2 2 0 RNA 3'-terminal phosphate cyclase (RTC), insert domain Hydantoinase_B PF02538.14 AID34081.1 - 8e-114 380.9 1.2 9.4e-114 380.6 1.2 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Acetone_carb_G PF08882.11 AID34082.1 - 1.5e-49 166.9 0.1 1.8e-49 166.6 0.1 1.1 1 0 0 1 1 1 1 Acetone carboxylase gamma subunit UPF0547 PF10571.9 AID34082.1 - 0.67 10.1 5.6 6.1 7.0 0.5 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 adh_short_C2 PF13561.6 AID34083.1 - 3.5e-49 167.5 8.5 6.8e-48 163.3 8.5 2.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34083.1 - 3.7e-48 163.6 2.7 1.1e-46 158.7 2.7 2.1 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID34083.1 - 1e-10 41.8 0.3 1.5e-10 41.2 0.3 1.3 1 0 0 1 1 1 1 KR domain Wzy_C PF04932.15 AID34084.1 - 2.4e-17 63.0 10.1 2.4e-17 63.0 10.1 3.7 2 1 1 4 4 4 1 O-Antigen ligase HTH_1 PF00126.27 AID34085.1 - 4.2e-17 61.8 0.9 6.6e-17 61.2 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID34085.1 - 6.1e-15 55.1 0.9 4.8e-14 52.2 0.9 2.1 1 1 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 AID34085.1 - 9.5e-05 22.1 0.1 0.00019 21.1 0.1 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_28 PF13518.6 AID34085.1 - 0.00024 21.2 0.2 0.00074 19.6 0.2 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_50 PF18024.1 AID34085.1 - 0.00034 20.1 1.1 0.0005 19.6 0.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34085.1 - 0.0025 17.6 0.1 0.0066 16.2 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_AsnC-type PF13404.6 AID34085.1 - 0.021 14.7 0.3 0.045 13.6 0.3 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_38 PF13936.6 AID34085.1 - 0.022 14.5 0.1 0.049 13.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID34085.1 - 0.024 14.1 0.1 0.079 12.4 0.1 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_24 PF13412.6 AID34085.1 - 0.092 12.3 0.1 0.18 11.4 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID34085.1 - 0.14 12.1 0.0 0.36 10.8 0.0 1.7 1 0 0 1 1 1 0 HTH domain adh_short_C2 PF13561.6 AID34086.1 - 1.2e-61 208.3 0.0 1.5e-61 208.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34086.1 - 1.9e-46 158.0 0.0 2.3e-46 157.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID34086.1 - 5.2e-14 52.5 0.1 7.2e-14 52.1 0.1 1.2 1 0 0 1 1 1 1 KR domain MiaE PF06175.11 AID34086.1 - 0.018 14.6 0.0 0.024 14.2 0.0 1.1 1 0 0 1 1 1 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F420_oxidored PF03807.17 AID34087.1 - 4.1e-21 75.4 0.3 3.7e-20 72.3 0.1 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 AID34087.1 - 3.6e-06 27.3 0.0 1.6e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Rossmann-like PF10727.9 AID34087.1 - 9.7e-06 25.5 0.5 7.4e-05 22.6 0.1 2.0 2 0 0 2 2 2 1 Rossmann-like domain Sacchrp_dh_NADP PF03435.18 AID34087.1 - 2e-05 24.8 0.0 0.00014 22.1 0.0 2.0 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 AID34087.1 - 2.5e-05 23.7 0.0 4.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 AID34087.1 - 0.00016 21.6 0.1 0.00087 19.2 0.0 2.0 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 AID34087.1 - 0.00044 19.9 0.0 0.00069 19.2 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 AID34087.1 - 0.00091 19.2 0.1 0.058 13.4 0.1 2.3 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 AID34087.1 - 0.0014 18.9 0.1 0.0071 16.6 0.0 2.1 2 1 0 2 2 2 1 TrkA-N domain GFO_IDH_MocA PF01408.22 AID34087.1 - 0.0014 19.5 0.2 0.0033 18.3 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ApbA PF02558.16 AID34087.1 - 0.0028 17.3 0.1 0.0089 15.7 0.1 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Semialdhyde_dh PF01118.24 AID34087.1 - 0.0058 17.1 0.1 0.036 14.5 0.0 2.0 1 1 1 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain PDH PF02153.17 AID34087.1 - 0.011 14.7 0.0 0.02 13.9 0.0 1.4 1 0 0 1 1 1 0 Prephenate dehydrogenase Shikimate_DH PF01488.20 AID34087.1 - 0.012 15.7 0.0 0.032 14.3 0.0 1.7 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 AID34087.1 - 0.013 16.0 0.3 0.028 14.9 0.3 1.8 1 1 0 1 1 1 0 XdhC Rossmann domain NAD_binding_7 PF13241.6 AID34087.1 - 0.029 14.8 0.0 0.089 13.2 0.0 1.9 1 1 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox PF00070.27 AID34087.1 - 0.029 14.9 0.0 0.11 13.1 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.6 AID34087.1 - 0.033 14.1 0.4 0.081 12.8 0.0 1.7 2 0 0 2 2 2 0 NAD(P)H-binding DUF3000 PF11452.8 AID34087.1 - 0.052 13.1 0.1 0.078 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3000) NmrA PF05368.13 AID34087.1 - 0.09 12.3 0.0 0.42 10.1 0.0 1.9 1 1 1 2 2 2 0 NmrA-like family adh_short PF00106.25 AID34087.1 - 0.11 11.9 0.1 1.8 8.0 0.0 2.1 2 0 0 2 2 2 0 short chain dehydrogenase adh_short_C2 PF13561.6 AID34087.1 - 0.15 11.6 1.0 6 6.3 0.1 2.1 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase Poly_export PF02563.16 AID34088.1 - 5.1e-16 58.7 0.0 2.5e-15 56.5 0.0 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis/export protein SLBB PF10531.9 AID34088.1 - 1e-05 25.3 0.0 2.3e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 SLBB domain DUF5082 PF16888.5 AID34088.1 - 0.0084 16.4 2.3 0.0084 16.4 2.3 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF5082) Spc7 PF08317.11 AID34088.1 - 0.026 13.4 11.2 0.038 12.9 11.2 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein KfrA_N PF11740.8 AID34088.1 - 0.035 14.8 3.3 0.035 14.8 3.3 2.9 3 0 0 3 3 3 0 Plasmid replication region DNA-binding N-term TRAF_BIRC3_bd PF16673.5 AID34088.1 - 0.057 13.2 0.1 0.18 11.6 0.1 1.8 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain Pol_alpha_B_N PF08418.10 AID34088.1 - 0.1 12.5 3.1 0.15 12.0 3.1 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit B N-terminal MscS_porin PF12795.7 AID34088.1 - 1.6 8.2 27.9 12 5.3 27.9 2.2 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Tropomyosin_1 PF12718.7 AID34088.1 - 6.1 7.0 13.8 4.8 7.3 4.2 2.3 1 1 1 2 2 2 0 Tropomyosin like FAM184 PF15665.5 AID34088.1 - 10 5.9 11.4 1 9.1 3.0 2.1 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B Bac_transf PF02397.16 AID34089.1 - 4e-48 163.4 0.1 1.6e-43 148.5 0.0 2.0 2 0 0 2 2 2 2 Bacterial sugar transferase DEC-1_N PF04625.13 AID34089.1 - 0.0086 15.1 8.5 0.011 14.8 8.5 1.2 1 0 0 1 1 1 1 DEC-1 protein, N-terminal region Mito_fiss_reg PF05308.11 AID34089.1 - 0.4 10.7 6.8 0.62 10.1 6.8 1.3 1 0 0 1 1 1 0 Mitochondrial fission regulator SyrA PF11089.8 AID34090.1 - 0.0016 18.5 2.2 0.0016 18.5 2.2 1.6 2 0 0 2 2 2 1 Exopolysaccharide production repressor BPD_transp_1 PF00528.22 AID34090.1 - 0.016 14.9 4.0 0.02 14.7 4.0 1.1 1 0 0 1 1 1 0 Binding-protein-dependent transport system inner membrane component Phage_holin_3_6 PF07332.11 AID34090.1 - 0.059 13.4 3.1 0.073 13.1 3.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4175 PF13779.6 AID34090.1 - 0.099 10.5 0.7 0.11 10.4 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) ABC_tran PF00005.27 AID34091.1 - 5.6e-34 117.6 0.0 9.9e-34 116.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID34091.1 - 1.1e-14 54.8 15.7 1.5e-14 54.3 15.7 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID34091.1 - 2.9e-10 40.0 0.1 5.3e-06 26.0 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34091.1 - 1.6e-05 24.5 1.7 5.8e-05 22.7 0.8 2.3 2 1 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.6 AID34091.1 - 4.2e-05 23.2 0.3 0.00013 21.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID34091.1 - 0.0003 21.2 0.3 0.00073 20.0 0.3 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 AID34091.1 - 0.00042 20.2 0.1 0.028 14.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34091.1 - 0.00061 20.1 0.2 0.0073 16.6 0.1 2.6 2 1 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 AID34091.1 - 0.0036 17.2 0.1 0.0073 16.2 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 AID34091.1 - 0.014 15.9 0.1 0.026 15.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 AID34091.1 - 0.028 14.4 0.0 4.6 7.1 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_30 PF13604.6 AID34091.1 - 0.036 13.8 0.1 0.13 12.0 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID34091.1 - 0.044 13.5 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 AID34091.1 - 0.06 13.5 0.1 0.22 11.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 AID34091.1 - 0.07 12.5 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 AID34091.1 - 0.12 12.4 0.0 0.52 10.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 AID34091.1 - 0.14 12.5 0.0 1.8 9.0 0.0 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 AID34091.1 - 0.2 11.4 0.3 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase Hpr_kinase_C PF07475.12 AID34092.1 - 6.6e-09 35.5 0.2 1e-08 34.9 0.2 1.2 1 0 0 1 1 1 1 HPr Serine kinase C-terminal domain PEPCK_ATP PF01293.20 AID34092.1 - 0.012 14.3 0.1 0.017 13.8 0.1 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase AAA_29 PF13555.6 AID34092.1 - 0.09 12.5 0.2 0.2 11.4 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Asn_synthase PF00733.21 AID34094.1 - 1.4e-46 159.8 0.0 1.8e-46 159.5 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 AID34094.1 - 3.7e-18 65.6 0.1 7e-18 64.7 0.1 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AID34094.1 - 6.1e-14 52.4 0.0 1e-13 51.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 AID34094.1 - 0.0056 16.2 0.0 0.0089 15.5 0.0 1.2 1 0 0 1 1 1 1 Aluminium induced protein Transglut_core3 PF13471.6 AID34096.1 - 1.6e-18 66.7 0.8 1.7e-18 66.6 0.8 1.0 1 0 0 1 1 1 1 Transglutaminase-like superfamily PqqD PF05402.12 AID34097.1 - 4.3e-18 65.4 0.0 5.9e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) NTP_transf_5 PF14907.6 AID34099.1 - 1.7e-40 139.3 0.0 2.1e-40 139.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised nucleotidyltransferase Transglut_core3 PF13471.6 AID34099.1 - 0.02 14.8 0.2 0.064 13.2 0.2 1.9 1 0 0 1 1 1 0 Transglutaminase-like superfamily Glycos_transf_2 PF00535.26 AID34100.1 - 9.7e-23 80.8 1.3 5e-22 78.5 1.3 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34100.1 - 1.3e-08 35.0 0.5 2.2e-08 34.3 0.5 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID34100.1 - 1.5e-05 25.4 0.1 0.00011 22.6 0.0 2.3 2 1 1 3 3 3 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 AID34100.1 - 0.00025 20.6 0.1 0.0029 17.1 0.1 2.4 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_hydro_16 PF00722.21 AID34102.1 - 4.2e-41 140.4 0.2 5.6e-41 139.9 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 Laminin_G_3 PF13385.6 AID34102.1 - 5.1e-06 26.7 0.2 8.5e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily DUF1080 PF06439.11 AID34102.1 - 8.8e-05 22.7 0.8 0.00012 22.2 0.8 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1080) UDPG_MGDP_dh_N PF03721.14 AID34103.1 - 4.9e-66 221.9 0.3 1.6e-65 220.2 0.8 1.6 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 AID34103.1 - 6.3e-39 132.1 0.0 1.4e-38 131.0 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 AID34103.1 - 5.7e-29 100.6 0.0 2.6e-28 98.5 0.0 2.1 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3HCDH_N PF02737.18 AID34103.1 - 6.6e-05 22.9 0.2 0.0002 21.3 0.2 1.8 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID34103.1 - 0.001 19.3 0.7 0.027 14.7 0.1 2.8 3 0 0 3 3 3 1 TrkA-N domain NAD_binding_11 PF14833.6 AID34103.1 - 0.0049 17.1 0.1 0.19 12.0 0.1 2.5 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ApbA PF02558.16 AID34103.1 - 0.0062 16.2 0.1 0.024 14.3 0.1 1.9 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 AID34103.1 - 0.043 13.0 0.9 0.08 12.2 0.9 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 AID34103.1 - 0.055 14.0 1.1 0.26 11.9 1.1 2.2 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 AID34103.1 - 0.068 13.6 0.5 4.1 7.9 0.3 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 AID34103.1 - 0.15 12.0 0.1 0.94 9.4 0.1 2.4 1 1 1 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 AID34103.1 - 0.2 11.8 1.1 1.2 9.3 0.5 2.6 2 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase GMC_oxred_C PF05199.13 AID34104.1 - 1e-15 58.5 0.0 1.9e-15 57.6 0.0 1.4 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 AID34104.1 - 0.00029 20.3 0.0 0.00044 19.7 0.0 1.3 1 1 0 1 1 1 1 GMC oxidoreductase FAD_oxidored PF12831.7 AID34104.1 - 0.038 13.3 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Glyco_transf_4 PF13439.6 AID34106.1 - 2.8e-13 50.2 0.0 7.7e-13 48.8 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 AID34106.1 - 6.8e-10 38.7 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 AID34106.1 - 1.8e-09 38.1 0.0 3.2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 AID34106.1 - 3.3e-08 34.1 0.0 8.3e-08 32.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 AID34106.1 - 0.00024 21.4 0.0 0.00045 20.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Pribosyltran PF00156.27 AID34107.1 - 2.1e-10 40.3 0.0 3.8e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Polysacc_synt_3 PF13440.6 AID34108.1 - 3e-86 289.3 3.5 5e-86 288.6 3.5 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 AID34108.1 - 1.6e-36 126.1 9.6 1.6e-36 126.1 9.6 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 AID34108.1 - 1.8e-06 28.1 6.0 1.8e-06 28.1 6.0 3.5 3 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 AID34108.1 - 1.4e-05 23.9 12.4 4e-05 22.4 12.2 1.9 1 1 0 1 1 1 1 Lipid II flippase MurJ Glyco_trans_4_4 PF13579.6 AID34109.1 - 4.4e-05 24.0 2.9 0.00011 22.7 2.9 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_2 PF00535.26 AID34110.1 - 7.6e-22 77.9 0.0 9.9e-22 77.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34110.1 - 1.9e-09 37.8 0.2 4.9e-09 36.4 0.2 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 AID34110.1 - 3.3e-06 27.2 3.3 5.5e-06 26.4 3.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 AID34110.1 - 3.4e-05 23.4 0.0 0.00016 21.2 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID34110.1 - 0.0024 18.3 0.0 0.0048 17.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 AID34110.1 - 0.023 14.2 0.0 0.034 13.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 21 Imm_superinfect PF14373.6 AID34110.1 - 0.9 9.5 7.0 8.6 6.4 0.6 2.7 2 0 0 2 2 2 0 Superinfection immunity protein Glycos_transf_2 PF00535.26 AID34111.1 - 1.2e-17 64.2 0.0 1.6e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34111.1 - 3.1e-09 37.1 0.5 6.2e-09 36.1 0.5 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID34111.1 - 0.012 16.1 0.1 0.025 15.1 0.1 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 AID34111.1 - 0.11 12.0 0.2 0.36 10.3 0.2 1.8 1 1 0 1 1 1 0 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 AID34112.1 - 4.8e-32 111.1 0.2 7.2e-32 110.5 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34112.1 - 8.9e-18 65.0 2.9 2.8e-17 63.4 2.3 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 AID34112.1 - 0.00013 22.4 0.1 0.0005 20.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 AID34112.1 - 0.0004 19.9 0.0 0.00075 19.1 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 NTP_transferase PF00483.23 AID34113.1 - 5.4e-20 72.0 0.0 9.8e-20 71.2 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 AID34113.1 - 2.1e-07 31.4 0.0 5.1e-06 26.9 0.0 2.2 2 0 0 2 2 2 1 MobA-like NTP transferase domain IspD PF01128.19 AID34113.1 - 0.086 12.6 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GNVR PF13807.6 AID34114.1 - 1.6e-09 37.6 1.3 2.1e-08 34.0 0.0 2.5 2 0 0 2 2 2 1 G-rich domain on putative tyrosine kinase AAA_31 PF13614.6 AID34114.1 - 8.1e-09 35.6 0.0 1.9e-08 34.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 AID34114.1 - 1.7e-08 34.5 0.0 1.4e-07 31.7 0.0 2.4 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 AID34114.1 - 2.1e-08 33.9 0.0 7.4e-08 32.1 0.0 1.9 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Wzz PF02706.15 AID34114.1 - 6.2e-08 32.8 1.0 2e-07 31.2 0.5 2.2 2 0 0 2 2 2 1 Chain length determinant protein CBP_BcsQ PF06564.12 AID34114.1 - 1.5e-05 24.6 0.0 2.8e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ APS_kinase PF01583.20 AID34114.1 - 0.00028 20.8 0.4 0.00078 19.4 0.1 1.9 2 0 0 2 2 2 1 Adenylylsulphate kinase CLP1_P PF16575.5 AID34114.1 - 0.11 12.2 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Acyl_transf_3 PF01757.22 AID34115.1 - 2.9e-16 59.5 41.3 3.3e-16 59.3 41.3 1.0 1 0 0 1 1 1 1 Acyltransferase family AMP-binding PF00501.28 AID34116.1 - 5.4e-82 275.6 0.0 8e-82 275.1 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID34116.1 - 4.2e-24 85.3 1.6 4.2e-24 85.3 1.6 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 AID34116.1 - 1.4e-17 63.3 4.8 3.1e-17 62.2 4.8 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus DUF2259 PF10016.9 AID34117.1 - 0.00068 19.6 0.0 0.0008 19.4 0.0 1.1 1 0 0 1 1 1 1 Predicted secreted protein (DUF2259) Dak1 PF02733.17 AID34119.1 - 1.1e-121 405.5 0.8 1.2e-121 405.4 0.8 1.0 1 0 0 1 1 1 1 Dak1 domain YdaS_antitoxin PF15943.5 AID34120.1 - 0.085 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT PEP-utilizers_C PF02896.18 AID34121.1 - 2.4e-84 282.9 0.0 3.1e-84 282.6 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 AID34121.1 - 5.1e-10 38.9 1.9 2.9e-09 36.5 0.3 2.5 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.13 AID34121.1 - 0.0011 19.1 0.0 0.053 13.7 0.0 2.5 1 1 1 2 2 2 1 PEP-utilising enzyme, N-terminal PTS-HPr PF00381.19 AID34122.1 - 1.4e-19 70.1 0.3 1.6e-19 69.9 0.3 1.1 1 0 0 1 1 1 1 PTS HPr component phosphorylation site EIIA-man PF03610.16 AID34123.1 - 1.1e-32 112.7 0.8 1.2e-32 112.5 0.8 1.0 1 0 0 1 1 1 1 PTS system fructose IIA component Dak2 PF02734.17 AID34124.1 - 1e-44 152.5 8.6 1.4e-44 152.1 8.6 1.2 1 0 0 1 1 1 1 DAK2 domain Dak1 PF02733.17 AID34125.1 - 4.8e-99 331.2 5.2 2.3e-98 328.9 0.1 2.2 2 0 0 2 2 2 2 Dak1 domain Dak2 PF02734.17 AID34125.1 - 2e-41 141.8 12.0 2e-41 141.8 12.0 1.8 2 0 0 2 2 2 1 DAK2 domain ABC_tran PF00005.27 AID34126.1 - 4.7e-30 104.9 0.0 7.7e-30 104.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID34126.1 - 1.7e-07 31.3 0.1 4.6e-07 29.9 0.1 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID34126.1 - 3.7e-06 27.0 0.0 0.015 15.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 AID34126.1 - 0.0045 17.4 0.1 0.0079 16.6 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 AID34126.1 - 0.0093 16.5 0.1 0.015 15.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 AID34126.1 - 0.012 15.9 0.1 0.018 15.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 AID34126.1 - 0.012 15.3 0.3 0.032 13.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID34126.1 - 0.039 13.9 0.0 0.071 13.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 AID34126.1 - 0.053 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 AID34126.1 - 0.078 13.4 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 AID34126.1 - 0.081 12.5 2.2 0.4 10.2 0.1 2.8 3 1 1 4 4 4 0 AAA domain AAA_28 PF13521.6 AID34126.1 - 0.19 12.0 0.8 0.37 11.0 0.4 1.6 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 AID34127.1 - 2.6e-27 96.0 0.0 3.8e-27 95.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 AID34127.1 - 1.4e-10 41.2 0.0 3e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 TOBE domain OB_MalK PF17912.1 AID34127.1 - 3.8e-06 27.6 0.6 3.1e-05 24.7 0.3 2.7 2 0 0 2 2 2 1 MalK OB fold domain AAA_16 PF13191.6 AID34127.1 - 0.02 15.3 0.0 0.032 14.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 AID34127.1 - 0.022 14.7 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA PF00004.29 AID34127.1 - 0.053 14.0 0.0 0.12 12.8 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID34127.1 - 0.057 13.7 0.5 0.17 12.1 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID34127.1 - 0.074 13.5 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 AID34127.1 - 0.12 11.9 0.1 0.33 10.6 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain SMC_N PF02463.19 AID34127.1 - 0.13 11.6 0.1 2.6 7.4 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 AID34127.1 - 0.16 12.2 0.2 0.39 11.0 0.2 1.6 1 0 0 1 1 1 0 AAA domain TMEM43 PF07787.12 AID34128.1 - 0.25 10.7 1.6 0.25 10.7 1.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 BPD_transp_1 PF00528.22 AID34129.1 - 3.7e-20 72.4 12.9 3.7e-20 72.4 12.9 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID34130.1 - 2.8e-20 72.9 16.6 2.8e-20 72.9 16.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TM_PBP2_N PF16296.5 AID34130.1 - 0.011 15.9 0.2 0.02 15.0 0.2 1.4 1 0 0 1 1 1 0 N-terminal of TM subunit in PBP-dependent ABC transporters SBP_bac_8 PF13416.6 AID34131.1 - 7.3e-25 88.3 7.7 9.6e-25 87.9 7.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID34131.1 - 3.7e-20 73.1 13.0 6.4e-20 72.3 13.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Baculo_F PF12259.8 AID34131.1 - 0.076 11.5 0.0 0.11 11.0 0.0 1.1 1 0 0 1 1 1 0 Baculovirus F protein PIG-L PF02585.17 AID34132.1 - 4.4e-26 92.1 0.1 5.9e-26 91.6 0.1 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase EamA PF00892.20 AID34133.1 - 4.1e-21 75.6 31.2 1.2e-13 51.4 12.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 AID34133.1 - 0.014 14.8 5.9 0.17 11.2 2.3 2.3 1 1 0 2 2 2 0 Triose-phosphate Transporter family SLC35F PF06027.12 AID34133.1 - 0.8 9.2 6.1 1.9 7.9 6.0 1.7 1 1 0 1 1 1 0 Solute carrier family 35 HrpB_C PF08482.10 AID34134.1 - 3.7e-47 160.1 0.0 7.4e-47 159.1 0.0 1.5 1 0 0 1 1 1 1 ATP-dependent helicase C-terminal Helicase_C PF00271.31 AID34134.1 - 1.6e-13 50.9 0.0 2.7e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 AID34134.1 - 1.1e-09 38.3 0.0 1.8e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase HA2 PF04408.23 AID34134.1 - 8e-06 26.1 0.4 2e-05 24.8 0.4 1.7 1 0 0 1 1 1 1 Helicase associated domain (HA2) AAA_30 PF13604.6 AID34134.1 - 0.002 17.9 0.1 0.0091 15.7 0.1 2.2 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 AID34134.1 - 0.045 13.3 1.7 0.13 11.8 0.1 2.6 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 AID34134.1 - 0.12 12.7 0.0 0.29 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 AID34134.1 - 0.23 11.8 0.0 0.23 11.8 0.0 3.1 3 1 0 3 3 3 0 AAA ATPase domain HATPase_c PF02518.26 AID34135.1 - 2.7e-16 60.1 0.0 4.2e-16 59.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID34135.1 - 3.1e-08 33.5 0.0 7.3e-08 32.3 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 AID34135.1 - 9.8e-05 22.2 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 AID34135.1 - 0.00012 22.0 0.0 0.00027 20.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Response_reg PF00072.24 AID34136.1 - 7.5e-23 80.8 0.0 1e-22 80.4 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HTH_8 PF02954.19 AID34136.1 - 8.4e-05 22.3 0.6 0.00036 20.2 0.2 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family HTH_30 PF13556.6 AID34136.1 - 0.0001 22.0 0.3 0.00024 20.8 0.3 1.6 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 AID34136.1 - 0.0022 17.7 1.4 0.0036 17.0 1.4 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 AID34136.1 - 0.0041 17.2 0.3 0.0075 16.4 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 AID34136.1 - 0.025 14.6 0.4 0.053 13.6 0.4 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 AID34136.1 - 0.029 13.8 0.1 0.054 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 OKR_DC_1_N PF03709.15 AID34136.1 - 0.03 14.6 0.0 0.52 10.6 0.0 2.2 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain MarR_2 PF12802.7 AID34136.1 - 0.067 13.1 0.1 6.8 6.7 0.0 2.4 2 0 0 2 2 2 0 MarR family MarR PF01047.22 AID34136.1 - 0.08 12.9 0.1 8.4 6.4 0.0 2.3 2 0 0 2 2 2 0 MarR family Na_H_antiport_1 PF06965.12 AID34137.1 - 1.2e-142 475.2 32.3 1.4e-142 475.0 32.3 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 MmcB-like PF06319.12 AID34138.1 - 1.3e-73 245.5 0.2 1.5e-73 245.4 0.2 1.0 1 0 0 1 1 1 1 DNA repair protein MmcB-like PDDEXK_9 PF08011.11 AID34138.1 - 0.042 13.8 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily MerR-DNA-bind PF09278.11 AID34140.1 - 7.7e-21 74.4 2.9 1.2e-20 73.8 2.9 1.3 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 AID34140.1 - 2.4e-18 66.0 0.0 6.1e-18 64.7 0.0 1.6 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AID34140.1 - 6.9e-15 54.5 0.2 1.1e-14 53.9 0.2 1.4 1 0 0 1 1 1 1 MerR family regulatory protein AbiEi_4 PF13338.6 AID34140.1 - 0.068 13.3 0.2 0.32 11.2 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin DUF5082 PF16888.5 AID34140.1 - 0.14 12.4 0.1 0.21 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) YkuD PF03734.14 AID34141.1 - 9.8e-17 61.7 0.0 1.4e-16 61.3 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Nfu_N PF08712.11 AID34142.1 - 5.6e-32 109.6 0.0 9.5e-32 108.9 0.0 1.4 1 0 0 1 1 1 1 Scaffold protein Nfu/NifU N terminal NifU PF01106.17 AID34142.1 - 3.6e-28 97.5 0.0 5.2e-28 97.0 0.0 1.3 1 0 0 1 1 1 1 NifU-like domain Usp PF00582.26 AID34143.1 - 2.4e-19 70.2 0.1 2.9e-19 70.0 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family AIRC PF00731.20 AID34143.1 - 0.074 12.6 0.1 0.098 12.2 0.1 1.2 1 0 0 1 1 1 0 AIR carboxylase DNA_photolyase PF00875.18 AID34143.1 - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase tRNA-synt_1b PF00579.25 AID34145.1 - 2.2e-69 234.0 0.0 2.8e-69 233.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Glycos_transf_2 PF00535.26 AID34146.1 - 1.1e-18 67.6 0.0 6.6e-18 65.1 0.0 2.1 2 1 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34146.1 - 7.2e-10 39.1 0.0 2.2e-09 37.6 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 AID34146.1 - 4.1e-06 26.5 0.0 6.4e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 dTDP_sugar_isom PF00908.17 AID34147.1 - 1.4e-07 31.3 0.0 2.3e-07 30.7 0.0 1.4 1 1 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GlnD_UR_UTase PF08335.11 AID34148.1 - 1.7e-36 125.5 2.3 9.7e-36 123.1 0.1 2.9 3 0 0 3 3 3 1 GlnD PII-uridylyltransferase ACT PF01842.25 AID34148.1 - 4.6e-14 51.9 2.4 3.3e-08 33.2 0.1 3.0 2 0 0 2 2 2 2 ACT domain HD PF01966.22 AID34148.1 - 3.6e-13 49.8 1.3 4.6e-12 46.2 0.4 2.7 2 0 0 2 2 2 1 HD domain NTP_transf_2 PF01909.23 AID34148.1 - 8.5e-06 26.0 0.0 2.2e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain GlnE PF03710.15 AID34148.1 - 9.1e-06 25.3 0.3 2.9e-05 23.6 0.1 1.8 2 0 0 2 2 2 1 Glutamate-ammonia ligase adenylyltransferase ACT_6 PF13740.6 AID34148.1 - 9.6e-06 25.5 0.4 0.0072 16.3 0.1 2.7 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 AID34148.1 - 3.9e-05 24.2 0.0 0.064 13.8 0.0 2.8 2 0 0 2 2 2 2 ACT domain DUF294 PF03445.13 AID34148.1 - 0.081 12.7 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Glyco_transf_25 PF01755.17 AID34149.1 - 3.6e-34 118.4 0.0 1.5e-33 116.3 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) EcoRII-C PF09019.11 AID34149.1 - 0.14 12.3 0.0 6.8 6.8 0.0 2.2 2 0 0 2 2 2 0 EcoRII C terminal E1-E2_ATPase PF00122.20 AID34150.1 - 6.8e-54 182.1 0.3 6.8e-54 182.1 0.3 2.1 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 AID34150.1 - 1.3e-42 146.4 10.3 1.3e-42 146.4 10.3 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase YHS PF04945.13 AID34150.1 - 1.6e-40 136.9 5.0 6.8e-20 70.9 0.1 2.9 2 1 1 3 3 3 2 YHS domain Hydrolase_3 PF08282.12 AID34150.1 - 1.4e-07 31.6 2.0 0.003 17.4 0.6 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase zf-FCS PF06467.14 AID34150.1 - 4e-05 23.5 4.6 0.095 12.7 0.3 2.4 2 0 0 2 2 2 2 MYM-type Zinc finger with FCS sequence motif Ribosomal_L24e PF01246.20 AID34150.1 - 6.9e-05 23.0 0.6 0.3 11.4 0.1 2.4 2 0 0 2 2 2 2 Ribosomal protein L24e HAD PF12710.7 AID34150.1 - 0.009 16.4 0.1 0.05 14.0 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Arc_trans_TRASH PF08394.10 AID34150.1 - 0.12 12.8 0.3 7.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Archaeal TRASH domain FAP206 PF12018.8 AID34150.1 - 0.23 11.0 0.0 2.4 7.6 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF305 PF03713.13 AID34151.1 - 2.6e-22 79.6 4.4 3.5e-22 79.2 4.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF305) DUF4142 PF13628.6 AID34151.1 - 3.1e-05 24.2 0.3 4.2e-05 23.8 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) Aldo_ket_red PF00248.21 AID34152.1 - 6.5e-60 202.8 0.0 7.5e-58 196.0 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family MutS_V PF00488.21 AID34153.1 - 1.4e-86 289.4 0.4 2.4e-86 288.6 0.0 1.6 2 0 0 2 2 2 1 MutS domain V MutS_I PF01624.20 AID34153.1 - 3.1e-42 143.4 0.0 6.2e-42 142.4 0.0 1.5 1 0 0 1 1 1 1 MutS domain I MutS_III PF05192.18 AID34153.1 - 1.7e-31 110.0 0.3 3.1e-31 109.1 0.3 1.5 1 0 0 1 1 1 1 MutS domain III MutS_II PF05188.17 AID34153.1 - 1.3e-26 93.5 0.0 3.4e-26 92.2 0.0 1.7 1 0 0 1 1 1 1 MutS domain II MutS_IV PF05190.18 AID34153.1 - 8.5e-23 80.5 0.0 1.4e-22 79.8 0.0 1.4 1 0 0 1 1 1 1 MutS family domain IV PTA_PTB PF01515.19 AID34154.1 - 8.1e-97 324.4 0.1 1.2e-96 323.8 0.1 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 AID34154.1 - 1.2e-28 100.2 0.0 2.3e-26 92.7 0.0 2.6 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 AID34154.1 - 1.4e-23 83.5 1.8 3.6e-23 82.2 1.8 1.7 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain GGDEF PF00990.21 AID34155.1 - 9.4e-45 152.3 0.0 1.4e-44 151.7 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID34155.1 - 3.2e-17 62.6 0.0 5.4e-17 61.9 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 AID34155.1 - 3.9e-05 23.8 0.0 9.7e-05 22.6 0.0 1.6 2 0 0 2 2 2 1 PAS domain GGDEF_2 PF17853.1 AID34155.1 - 0.016 15.5 0.1 0.037 14.3 0.1 1.8 1 0 0 1 1 1 0 GGDEF-like domain DUF2384 PF09722.10 AID34156.1 - 4.8e-06 26.5 0.4 1.2e-05 25.2 0.4 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2384) HTH_17 PF12728.7 AID34156.1 - 0.0011 19.1 0.1 0.0023 18.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rv2175c_C PF18367.1 AID34156.1 - 0.0022 18.1 0.7 0.011 15.8 0.8 2.2 2 0 0 2 2 2 1 Rv2175c C-terminal domain of unknown function PfkB PF00294.24 AID34157.1 - 2.1e-44 152.1 0.3 5e-44 150.8 0.0 1.5 2 0 0 2 2 2 1 pfkB family carbohydrate kinase Fucose_iso_N2 PF07882.12 AID34157.1 - 0.076 12.6 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain Phosphonate-bd PF12974.7 AID34157.1 - 0.15 11.6 0.0 0.33 10.5 0.0 1.6 2 0 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein EamA PF00892.20 AID34158.1 - 6.9e-35 120.2 35.0 4.6e-21 75.4 10.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 AID34158.1 - 0.00067 19.7 5.7 0.023 14.7 1.3 2.9 2 1 0 2 2 2 2 Putative transmembrane family 234 DUF5357 PF17310.2 AID34158.1 - 2.2 6.7 4.0 2.9 6.4 0.8 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5357) EI24 PF07264.11 AID34159.1 - 2.1e-24 86.7 22.8 2.5e-24 86.5 22.8 1.0 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) PEP_mutase PF13714.6 AID34160.1 - 7.8e-65 218.7 0.1 8.9e-65 218.5 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase DBP10CT PF08147.12 AID34161.1 - 0.065 13.5 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 DBP10CT (NUC160) domain HAD_2 PF13419.6 AID34163.1 - 3.9e-22 79.2 0.0 4.5e-22 79.0 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID34163.1 - 1.6e-12 48.2 0.0 1.9e-10 41.4 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID34163.1 - 0.00027 21.0 0.0 0.0021 18.1 0.0 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID34163.1 - 0.00058 19.9 0.1 0.001 19.0 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 AID34163.1 - 0.044 14.2 0.0 0.049 14.0 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase dUTPase PF00692.19 AID34164.1 - 2e-28 98.7 0.0 2.5e-28 98.3 0.0 1.1 1 0 0 1 1 1 1 dUTPase AsnC_trans_reg PF01037.21 AID34165.1 - 6.5e-19 67.7 0.1 1e-18 67.0 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 AID34165.1 - 1.8e-18 65.8 0.4 3.3e-18 65.0 0.4 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID34165.1 - 1.7e-16 59.7 2.7 3.5e-16 58.7 2.7 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 AID34165.1 - 9e-07 28.7 0.1 1.6e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 AID34165.1 - 1.6e-05 24.7 0.3 2.7e-05 24.0 0.3 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 AID34165.1 - 2e-05 24.5 0.2 4.2e-05 23.5 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID34165.1 - 0.00077 19.4 0.2 0.002 18.1 0.2 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 AID34165.1 - 0.0016 18.3 0.0 0.003 17.4 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 AID34165.1 - 0.0068 16.3 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.12 AID34165.1 - 0.01 15.5 0.1 0.018 14.8 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain V_ATPase_prox PF18274.1 AID34165.1 - 0.041 13.8 0.1 0.19 11.7 0.1 2.2 2 0 0 2 2 2 0 Vacuolar ATPase Subunit I N-terminal proximal lobe Rrf2 PF02082.20 AID34165.1 - 0.056 13.8 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_28 PF13518.6 AID34165.1 - 0.06 13.5 0.7 0.26 11.5 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain GATase_4 PF13230.6 AID34167.1 - 2e-14 53.1 0.0 2.9e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 AID34167.1 - 4.6e-10 39.8 0.0 1.3e-09 38.4 0.0 1.6 1 1 1 2 2 2 1 Glutamine amidotransferase domain DUF4129 PF13559.6 AID34167.1 - 0.032 14.5 1.7 0.54 10.5 0.3 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4129) Amidase PF01425.21 AID34168.1 - 1.6e-101 340.6 0.0 6.5e-81 272.6 0.3 2.0 1 1 0 2 2 2 2 Amidase DAO PF01266.24 AID34169.1 - 1.2e-43 150.0 10.5 1.4e-43 149.8 10.5 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID34169.1 - 6.8e-06 25.5 0.5 0.0021 17.3 0.1 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID34169.1 - 2.6e-05 24.4 0.2 2.6e-05 24.4 0.2 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 AID34169.1 - 0.00012 21.4 1.0 0.00023 20.4 1.0 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 AID34169.1 - 0.00012 21.5 1.3 0.077 12.2 0.2 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 AID34169.1 - 0.00034 20.3 2.5 0.00074 19.2 1.6 2.0 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 AID34169.1 - 0.001 19.5 0.0 0.002 18.5 0.0 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox PF00070.27 AID34169.1 - 0.0017 18.9 1.8 0.0041 17.6 1.8 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 AID34169.1 - 0.0036 17.3 3.7 0.53 10.3 0.2 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding GIDA PF01134.22 AID34169.1 - 0.0079 15.3 5.2 0.02 14.0 1.9 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 AID34169.1 - 0.01 15.8 3.1 0.01 15.8 3.1 1.5 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 AID34169.1 - 0.015 14.4 0.4 0.015 14.4 0.4 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Shikimate_DH PF01488.20 AID34169.1 - 0.029 14.4 0.7 0.053 13.6 0.7 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 AID34169.1 - 0.045 13.0 2.2 0.081 12.2 2.2 1.3 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.14 AID34169.1 - 0.051 12.3 3.7 3.4 6.3 2.0 2.1 2 0 0 2 2 2 0 HI0933-like protein Sacchrp_dh_NADP PF03435.18 AID34169.1 - 0.061 13.6 0.4 0.13 12.5 0.4 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain FAD_oxidored PF12831.7 AID34169.1 - 0.14 11.5 2.4 0.18 11.1 2.4 1.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase TrkA_N PF02254.18 AID34169.1 - 0.18 12.1 2.8 0.21 11.9 0.5 2.1 2 0 0 2 2 2 0 TrkA-N domain Mqo PF06039.15 AID34169.1 - 0.22 10.0 0.4 0.34 9.4 0.4 1.2 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) Thi4 PF01946.17 AID34169.1 - 0.25 10.5 1.2 0.62 9.3 1.2 1.6 1 0 0 1 1 1 0 Thi4 family 2-Hacid_dh_C PF02826.19 AID34169.1 - 0.54 9.6 2.2 0.38 10.1 0.5 1.5 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 AID34169.1 - 0.75 10.4 3.9 0.42 11.2 1.1 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TetR_C_13 PF16925.5 AID34170.1 - 6.1e-30 103.5 0.0 8.4e-30 103.1 0.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 AID34170.1 - 3.9e-10 39.4 0.1 6.9e-10 38.6 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 AID34170.1 - 0.00021 21.5 0.1 0.00075 19.7 0.0 1.8 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_C_11 PF16859.5 AID34170.1 - 0.0064 16.8 0.5 0.02 15.2 0.2 2.0 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain Abhydrolase_1 PF00561.20 AID34171.1 - 1.7e-24 86.9 0.0 1.9e-23 83.4 0.0 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID34171.1 - 3.4e-15 57.3 5.7 4.5e-15 56.9 5.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 AID34171.1 - 0.0012 18.2 0.0 0.01 15.1 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Chlorophyllase2 PF12740.7 AID34171.1 - 0.026 13.4 0.0 0.1 11.5 0.0 1.8 2 0 0 2 2 2 0 Chlorophyllase enzyme Chlorophyllase PF07224.11 AID34171.1 - 0.16 10.9 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase GTP_EFTU PF00009.27 AID34172.1 - 1.6e-50 171.3 0.0 2.5e-50 170.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain RF3_C PF16658.5 AID34172.1 - 8.4e-39 132.4 0.0 1.5e-38 131.6 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain GTP_EFTU_D2 PF03144.25 AID34172.1 - 4.2e-09 36.7 0.0 1.1e-08 35.3 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 AID34172.1 - 2.2e-06 27.7 0.0 4.8e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 AID34172.1 - 0.0012 18.9 0.0 0.0032 17.5 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II SRPRB PF09439.10 AID34172.1 - 0.02 14.3 0.1 0.14 11.6 0.1 2.1 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 AID34172.1 - 0.033 13.7 0.1 1.1 8.8 0.0 2.7 2 1 0 2 2 2 0 Ferrous iron transport protein B 3-dmu-9_3-mt PF06983.13 AID34173.1 - 1.2e-47 161.2 0.0 1.6e-47 160.8 0.0 1.2 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase AHSA1 PF08327.11 AID34174.1 - 3.6e-28 98.3 0.0 4.7e-28 97.9 0.0 1.2 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Antimicrobial14 PF08109.11 AID34174.1 - 0.28 11.3 1.7 0.29 11.2 0.0 1.9 2 0 0 2 2 2 0 Lactocin 705 family HTH_20 PF12840.7 AID34175.1 - 3.5e-14 52.6 0.2 5.7e-14 51.9 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 AID34175.1 - 4e-14 52.2 0.0 5.4e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID34175.1 - 2.7e-07 30.3 0.3 4.3e-07 29.7 0.3 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID34175.1 - 5.2e-06 26.3 0.1 2.1e-05 24.3 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 AID34175.1 - 0.00014 21.3 0.0 0.00024 20.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID34175.1 - 0.001 19.0 0.0 0.0016 18.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_28 PF13518.6 AID34175.1 - 0.0013 18.8 2.8 0.0017 18.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 AID34175.1 - 0.0023 17.8 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 AID34175.1 - 0.0035 17.5 0.0 0.0055 16.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 AID34175.1 - 0.0055 16.6 0.0 0.0075 16.2 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 AID34175.1 - 0.01 15.6 0.1 0.016 15.0 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 AID34175.1 - 0.013 15.7 0.0 0.018 15.3 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HxlR PF01638.17 AID34175.1 - 0.015 15.1 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_DeoR PF08220.12 AID34175.1 - 0.02 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 AID34175.1 - 0.03 14.7 0.0 0.046 14.1 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DUF4423 PF14394.6 AID34175.1 - 0.03 14.0 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_36 PF13730.6 AID34175.1 - 0.034 14.1 0.0 0.051 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 AID34175.1 - 0.042 13.5 0.0 0.17 11.6 0.0 2.1 2 1 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_1 PF00126.27 AID34175.1 - 0.068 13.1 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family LexA_DNA_bind PF01726.16 AID34175.1 - 0.068 13.0 0.2 0.12 12.1 0.1 1.5 2 0 0 2 2 2 0 LexA DNA binding domain HTH_27 PF13463.6 AID34175.1 - 0.07 13.6 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_29 PF13551.6 AID34175.1 - 0.071 13.1 0.6 0.25 11.4 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn helix B-block_TFIIIC PF04182.12 AID34175.1 - 0.14 12.4 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC ILVD_EDD PF00920.21 AID34176.1 - 4.8e-223 741.5 2.3 5.4e-223 741.3 2.3 1.0 1 0 0 1 1 1 1 Dehydratase family ABC_tran PF00005.27 AID34177.1 - 1.4e-35 122.7 0.1 2.9e-35 121.8 0.1 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID34177.1 - 2.4e-34 119.2 11.8 3.5e-34 118.7 11.8 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 AID34177.1 - 1.8e-09 37.4 0.3 6.4e-07 29.0 0.0 2.3 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID34177.1 - 0.00063 19.7 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 AID34177.1 - 0.00077 19.2 2.0 0.0045 16.7 2.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID34177.1 - 0.0013 18.4 0.1 0.003 17.3 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID34177.1 - 0.0023 18.3 0.3 0.0052 17.2 0.3 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID34177.1 - 0.0036 17.6 0.3 0.11 12.7 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_21 PF13304.6 AID34177.1 - 0.015 15.1 0.0 0.43 10.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID34177.1 - 0.016 15.7 0.0 0.03 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID34177.1 - 0.041 13.6 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Cornichon PF03311.14 AID34177.1 - 0.058 13.7 0.2 0.22 11.9 0.1 1.9 1 1 0 1 1 1 0 Cornichon protein AAA_25 PF13481.6 AID34177.1 - 0.07 12.7 0.1 0.23 11.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID34177.1 - 0.077 13.0 0.1 0.74 9.8 0.1 2.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 AID34177.1 - 0.079 12.5 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 AID34177.1 - 0.096 13.1 0.1 2.2 8.7 0.1 2.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 AID34177.1 - 0.27 11.5 1.4 2.6 8.3 1.4 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MnhB PF04039.13 AID34177.1 - 0.32 11.3 6.0 7.3 6.9 0.2 2.7 2 0 0 2 2 2 0 Domain related to MnhB subunit of Na+/H+ antiporter Amidohydro_3 PF07969.11 AID34178.1 - 1.8e-55 189.3 1.6 3.1e-53 181.9 1.6 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 AID34178.1 - 4.6e-13 49.2 0.0 6.3e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family ESR1_C PF12743.7 AID34178.1 - 0.046 13.5 0.1 0.095 12.5 0.1 1.4 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal EamA PF00892.20 AID34179.1 - 1.4e-21 77.1 32.9 7.5e-14 52.1 10.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family YqhR PF11085.8 AID34179.1 - 0.0084 16.0 1.7 0.0084 16.0 1.7 2.3 2 1 0 2 2 2 1 Conserved membrane protein YqhR Nuc_sug_transp PF04142.15 AID34179.1 - 0.013 14.6 1.1 0.022 13.9 1.1 1.5 1 1 0 1 1 1 0 Nucleotide-sugar transporter Phage_holin_3_2 PF04550.12 AID34179.1 - 6 7.5 8.4 5.1 7.7 0.6 3.7 3 1 1 4 4 4 0 Phage holin family 2 DUF805 PF05656.14 AID34180.1 - 8.8e-26 90.4 5.7 7.3e-24 84.2 2.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF805) GP41 PF00517.17 AID34180.1 - 0.76 9.7 3.4 5.4 6.9 0.2 2.1 2 0 0 2 2 2 0 Retroviral envelope protein CrgA PF06781.12 AID34180.1 - 2.7 8.1 8.4 1.3 9.2 2.0 2.7 2 1 1 3 3 3 0 Cell division protein CrgA Choline_kinase PF01633.20 AID34181.1 - 9.3e-23 80.9 0.0 1.5e-22 80.3 0.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 AID34181.1 - 1.1e-16 61.6 0.3 1.6e-16 61.0 0.3 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Methyltransf_11 PF08241.12 AID34182.1 - 3.8e-10 40.3 0.0 6.2e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID34182.1 - 2.9e-08 34.3 0.0 4.6e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID34182.1 - 0.00016 21.6 0.0 0.00019 21.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID34182.1 - 0.004 16.5 0.0 0.0048 16.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 AID34182.1 - 0.077 13.8 0.0 0.13 13.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 AID34182.1 - 0.16 11.5 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_31 PF13847.6 AID34182.1 - 0.19 11.5 0.0 0.41 10.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain GCV_T PF01571.21 AID34183.1 - 3.9e-86 288.6 0.0 5.3e-86 288.2 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 AID34183.1 - 9.6e-62 209.6 1.5 1.3e-61 209.2 1.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAO_M PF16350.5 AID34183.1 - 2.8e-21 75.6 0.4 5.8e-21 74.6 0.4 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain GCV_T_C PF08669.11 AID34183.1 - 6.5e-20 70.8 0.0 2.1e-19 69.2 0.0 2.0 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain NAD_binding_8 PF13450.6 AID34183.1 - 5e-06 26.7 1.6 1.8e-05 24.9 0.6 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain SoxG PF04268.12 AID34183.1 - 1.1e-05 25.6 0.1 4.9e-05 23.5 0.2 1.9 1 1 1 2 2 2 1 Sarcosine oxidase, gamma subunit family Pyr_redox_2 PF07992.14 AID34183.1 - 3.9e-05 23.0 0.7 0.0014 17.9 0.2 2.2 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID34183.1 - 0.0001 21.6 0.4 0.0005 19.3 0.4 1.9 2 0 0 2 2 2 1 FAD binding domain ApbA PF02558.16 AID34183.1 - 0.0023 17.6 0.3 0.0042 16.7 0.3 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 AID34183.1 - 0.0028 16.4 0.7 0.32 9.6 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein GMC_oxred_N PF00732.19 AID34183.1 - 0.009 15.4 0.1 0.031 13.6 0.0 1.9 2 0 0 2 2 2 1 GMC oxidoreductase Pyr_redox PF00070.27 AID34183.1 - 0.013 16.1 0.6 0.037 14.6 0.3 1.9 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID34183.1 - 0.015 14.5 0.3 0.031 13.5 0.3 1.4 1 0 0 1 1 1 0 Thi4 family NAD_binding_9 PF13454.6 AID34183.1 - 0.017 15.1 1.0 0.47 10.4 0.1 2.8 3 0 0 3 3 3 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 AID34183.1 - 0.14 11.4 0.1 0.7 9.1 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID34183.1 - 0.25 10.4 0.3 0.41 9.7 0.3 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 AID34183.1 - 0.31 10.0 1.2 0.47 9.5 0.2 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 AID34183.1 - 4.9 5.9 7.3 0.41 9.4 0.2 2.4 3 0 0 3 3 3 0 Tryptophan halogenase Choline_kinase PF01633.20 AID34184.1 - 5.9e-33 114.3 0.0 7.7e-33 113.9 0.0 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 AID34184.1 - 2.8e-20 73.2 1.8 3.6e-20 72.9 1.8 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family DeoRC PF00455.22 AID34185.1 - 5.6e-47 159.7 0.8 5.6e-47 159.7 0.8 1.4 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID34185.1 - 1e-13 50.8 0.0 2e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID34185.1 - 2.6e-09 36.9 0.0 6e-09 35.7 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 AID34185.1 - 3.5e-08 32.9 0.1 7.3e-08 31.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 AID34185.1 - 8e-06 25.6 0.2 2.8e-05 23.9 0.2 2.0 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 AID34185.1 - 0.001 18.5 0.2 0.0022 17.4 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 MarR PF01047.22 AID34185.1 - 0.0038 17.1 0.2 0.02 14.8 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 AID34185.1 - 0.0068 16.5 1.1 0.016 15.3 0.0 2.1 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_15 PF12324.8 AID34185.1 - 0.0092 15.9 0.2 0.031 14.2 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain of alkylmercury lyase HTH_23 PF13384.6 AID34185.1 - 0.016 15.0 0.3 0.056 13.3 0.1 1.9 2 0 0 2 2 1 0 Homeodomain-like domain Rrf2 PF02082.20 AID34185.1 - 0.017 15.4 0.0 0.051 13.9 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator GntR PF00392.21 AID34185.1 - 0.024 14.3 0.1 0.089 12.5 0.1 2.0 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family Asp_protease_2 PF13650.6 AID34185.1 - 0.03 14.9 0.7 0.15 12.7 0.2 2.2 2 0 0 2 2 2 0 Aspartyl protease HTH_38 PF13936.6 AID34185.1 - 0.031 14.0 0.1 0.1 12.4 0.0 1.9 2 0 0 2 2 1 0 Helix-turn-helix domain Put_DNA-bind_N PF06971.13 AID34185.1 - 0.032 14.2 0.1 0.088 12.8 0.1 1.7 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_29 PF13551.6 AID34185.1 - 0.036 14.1 0.0 0.086 12.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Fe_dep_repress PF01325.19 AID34185.1 - 0.042 14.0 0.0 0.13 12.5 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 AID34185.1 - 0.045 13.6 1.1 0.19 11.6 0.0 2.7 2 1 2 4 4 4 0 MarR family NBD_C PF17042.5 AID34185.1 - 0.062 13.8 1.8 0.18 12.3 0.4 2.2 2 1 0 2 2 2 0 Nucleotide-binding C-terminal domain HTH_Crp_2 PF13545.6 AID34185.1 - 0.068 13.1 0.1 0.29 11.1 0.0 2.2 2 0 0 2 2 1 0 Crp-like helix-turn-helix domain HTH_7 PF02796.15 AID34185.1 - 0.091 12.8 0.0 0.3 11.2 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain of resolvase DUF977 PF06163.11 AID34185.1 - 0.093 12.7 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) Mga PF05043.13 AID34185.1 - 0.15 12.7 0.0 0.25 11.9 0.0 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain DUF1670 PF07900.11 AID34185.1 - 0.17 11.2 0.0 0.29 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) Pyr_redox_2 PF07992.14 AID34186.1 - 5.3e-21 75.1 0.0 8.3e-21 74.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 AID34186.1 - 3.2e-09 36.4 2.6 9.2e-06 25.0 0.6 2.4 2 1 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 AID34186.1 - 1e-05 24.5 0.1 0.002 16.9 0.1 2.2 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.12 AID34186.1 - 1.6e-05 24.1 0.2 0.036 13.1 0.1 3.1 2 1 1 3 3 3 1 Lycopene cyclase protein DAO PF01266.24 AID34186.1 - 6.1e-05 22.8 1.0 0.0011 18.6 0.5 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 AID34186.1 - 0.00036 19.9 0.0 0.72 9.1 0.0 2.6 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID34186.1 - 0.00089 19.4 0.1 0.0021 18.2 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 AID34186.1 - 0.00089 18.7 0.8 0.00089 18.7 0.8 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 AID34186.1 - 0.0021 17.2 1.4 0.044 12.9 0.2 2.6 3 1 0 3 3 3 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 AID34186.1 - 0.0053 16.8 0.4 0.52 10.3 0.1 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 AID34186.1 - 0.099 11.9 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Rrf2 PF02082.20 AID34187.1 - 3.5e-22 78.6 0.3 1.3e-21 76.7 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator HTH_Crp_2 PF13545.6 AID34187.1 - 2.1e-05 24.4 0.1 5.9e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HrcA_DNA-bdg PF03444.15 AID34187.1 - 4.9e-05 22.9 0.0 7.2e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_11 PF08279.12 AID34187.1 - 0.0002 21.2 0.3 0.0018 18.2 0.0 2.4 2 1 1 3 3 3 1 HTH domain MarR PF01047.22 AID34187.1 - 0.0066 16.4 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 MarR family GntR PF00392.21 AID34187.1 - 0.0079 15.8 0.0 0.016 14.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 AID34187.1 - 0.011 15.7 0.1 0.054 13.4 0.0 2.0 2 0 0 2 2 2 0 MarR family Put_DNA-bind_N PF06971.13 AID34187.1 - 0.011 15.8 0.0 0.045 13.8 0.0 1.9 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus HATPase_c PF02518.26 AID34188.1 - 3.1e-20 72.7 0.0 2.4e-19 69.9 0.0 2.2 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID34188.1 - 1.3e-05 25.1 3.4 4.4e-05 23.4 3.4 2.0 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 AID34188.1 - 0.00071 19.5 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 AID34188.1 - 0.0015 18.4 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1441 PF07278.11 AID34188.1 - 0.14 12.1 0.1 0.3 11.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) ABC2_membrane_2 PF12679.7 AID34188.1 - 0.15 11.3 0.0 0.27 10.5 0.0 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein Response_reg PF00072.24 AID34189.1 - 7.2e-26 90.6 0.0 1e-25 90.1 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 AID34189.1 - 1.8e-20 72.8 1.9 2e-20 72.7 0.1 2.0 3 0 0 3 3 3 1 Transcriptional regulatory protein, C terminal Methyltransf_25 PF13649.6 AID34191.1 - 9.2e-05 23.1 0.0 0.00012 22.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 AID34191.1 - 0.0026 16.9 0.0 0.0033 16.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 AID34191.1 - 0.011 15.5 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain SNARE_assoc PF09335.11 AID34192.1 - 9.2e-17 61.6 7.0 1.6e-16 60.9 7.0 1.5 1 0 0 1 1 1 1 SNARE associated Golgi protein LysR_substrate PF03466.20 AID34193.1 - 1.6e-38 132.2 1.3 2.5e-38 131.6 1.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID34193.1 - 9.3e-20 70.3 0.1 1.9e-19 69.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Oxidored_nitro PF00148.19 AID34193.1 - 0.068 11.9 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase MarR_2 PF12802.7 AID34193.1 - 0.07 13.0 0.1 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 MarR family Fe_dep_repress PF01325.19 AID34193.1 - 0.077 13.2 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MerR_1 PF13411.6 AID34194.1 - 3.7e-16 59.0 0.0 6.4e-15 55.0 0.0 2.1 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 AID34194.1 - 1.1e-11 44.3 0.4 2.1e-11 43.4 0.4 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 AID34194.1 - 1.6e-11 44.6 1.8 2.8e-11 43.8 1.8 1.4 1 0 0 1 1 1 1 MerR, DNA binding HTH_17 PF12728.7 AID34194.1 - 0.00026 21.1 0.0 0.00063 19.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain T3SS_needle_E PF08988.10 AID34194.1 - 0.12 12.6 0.7 0.21 11.8 0.7 1.4 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle Methyltransf_25 PF13649.6 AID34195.1 - 9.3e-20 71.2 0.1 1.8e-19 70.2 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID34195.1 - 4.2e-19 68.8 0.0 5.1e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID34195.1 - 1.9e-18 66.9 0.1 3.5e-18 66.0 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 AID34195.1 - 1.2e-14 54.2 0.0 1.8e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 AID34195.1 - 3.3e-13 49.8 0.0 4.5e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID34195.1 - 3.4e-09 37.3 0.0 5.1e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 AID34195.1 - 6.5e-09 35.9 0.0 1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 AID34195.1 - 1.4e-06 27.9 0.0 2e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 AID34195.1 - 5.2e-05 22.9 0.0 8.5e-05 22.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 AID34195.1 - 7.4e-05 22.2 0.0 0.0001 21.7 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 AID34195.1 - 0.00011 21.8 0.0 0.00021 20.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_3 PF01596.17 AID34195.1 - 0.0016 17.6 0.0 0.0023 17.1 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_32 PF13679.6 AID34195.1 - 0.023 14.7 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.11 AID34195.1 - 0.025 13.5 0.0 0.034 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) MetW PF07021.12 AID34195.1 - 0.027 14.1 0.0 0.038 13.6 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW NodS PF05401.11 AID34195.1 - 0.03 13.9 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) RrnaAD PF00398.20 AID34195.1 - 0.053 12.6 0.0 0.071 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DOT1 PF08123.13 AID34195.1 - 0.059 12.9 0.0 2.5 7.6 0.0 2.1 2 0 0 2 2 2 0 Histone methylation protein DOT1 Methyltr_RsmB-F PF01189.17 AID34195.1 - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F SBP_bac_8 PF13416.6 AID34196.1 - 3.7e-26 92.6 1.7 4.7e-26 92.2 1.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID34196.1 - 2.3e-17 64.0 3.9 3.3e-17 63.4 3.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 AID34196.1 - 4.7e-14 52.4 1.6 5.1e-07 29.4 0.1 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 AID34196.1 - 0.0077 15.8 0.0 0.02 14.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Stonin2_N PF12016.8 AID34196.1 - 0.069 12.6 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Stonin 2 Ral PF11058.8 AID34196.1 - 0.12 11.9 0.0 0.29 10.7 0.0 1.6 1 0 0 1 1 1 0 Antirestriction protein Ral ABC_tran PF00005.27 AID34197.1 - 1.8e-33 116.0 0.0 3.7e-33 114.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 AID34197.1 - 8.8e-12 45.0 0.1 2.4e-11 43.6 0.1 1.8 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 AID34197.1 - 1.2e-07 31.8 0.0 0.00041 20.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34197.1 - 0.0015 18.8 0.2 0.012 15.9 0.2 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID34197.1 - 0.0027 17.2 0.0 0.15 11.4 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 AID34197.1 - 0.023 15.1 0.0 1.2 9.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID34197.1 - 0.032 14.0 0.0 0.076 12.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain sCache_3_2 PF17203.4 AID34197.1 - 0.043 13.9 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 Single cache domain 3 AAA_28 PF13521.6 AID34197.1 - 0.073 13.3 0.0 3 8.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID34197.1 - 0.14 12.7 0.0 0.42 11.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 AID34197.1 - 0.15 11.9 0.0 0.8 9.6 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase BPD_transp_1 PF00528.22 AID34198.1 - 2.8e-15 56.5 18.5 2.8e-15 56.5 18.5 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID34199.1 - 5.1e-12 45.9 14.0 5.1e-12 45.9 14.0 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Aldedh PF00171.22 AID34200.1 - 1.9e-157 524.5 0.1 2.2e-157 524.3 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family SnoaL_2 PF12680.7 AID34202.1 - 1e-09 39.0 0.0 1.2e-09 38.7 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4443 PF14544.6 AID34202.1 - 0.069 13.4 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4443) NTF2 PF02136.20 AID34202.1 - 0.15 12.7 0.0 0.18 12.4 0.0 1.2 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain CMD PF02627.20 AID34203.1 - 5.4e-17 61.6 0.2 8.6e-17 61.0 0.2 1.4 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family GerE PF00196.19 AID34204.1 - 3.3e-17 61.8 0.1 6.4e-17 60.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Abhydrolase_1 PF00561.20 AID34204.1 - 5.8e-15 55.6 0.0 2.1e-08 34.1 0.0 2.2 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 AID34204.1 - 3.5e-12 46.1 0.0 5.8e-12 45.4 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Sigma70_r4_2 PF08281.12 AID34204.1 - 5.6e-06 25.9 0.2 1.2e-05 24.8 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 AID34204.1 - 0.00063 19.5 0.1 0.0021 17.8 0.1 1.9 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 AID34204.1 - 0.0029 17.1 0.1 0.006 16.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Abhydrolase_4 PF08386.10 AID34204.1 - 0.0039 17.3 0.0 0.0095 16.0 0.0 1.6 1 0 0 1 1 1 1 TAP-like protein FSH1 PF03959.13 AID34204.1 - 0.0041 16.8 0.0 0.031 13.9 0.0 2.0 1 1 0 1 1 1 1 Serine hydrolase (FSH1) HTH_Tnp_ISL3 PF13542.6 AID34204.1 - 0.0069 15.8 0.1 0.023 14.1 0.1 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_40 PF14493.6 AID34204.1 - 0.014 15.9 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.6 AID34204.1 - 0.024 14.4 0.0 0.054 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 AID34204.1 - 0.058 13.5 0.1 0.32 11.2 0.1 2.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 AID34204.1 - 0.081 13.0 0.1 0.37 10.9 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix Ndr PF03096.14 AID34204.1 - 0.17 10.5 0.0 0.26 9.9 0.0 1.2 1 0 0 1 1 1 0 Ndr family FdsD PF11390.8 AID34205.1 - 3e-24 85.1 0.0 4.1e-24 84.7 0.0 1.2 1 0 0 1 1 1 1 NADH-dependant formate dehydrogenase delta subunit FdsD FdhD-NarQ PF02634.15 AID34206.1 - 2.2e-75 253.4 0.7 2.6e-75 253.2 0.7 1.1 1 0 0 1 1 1 1 FdhD/NarQ family Glyco_transf_21 PF13506.6 AID34206.1 - 0.1 12.1 0.2 0.19 11.2 0.2 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 Molybdopterin PF00384.22 AID34208.1 - 8.2e-69 232.6 0.0 1.2e-68 232.1 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 AID34208.1 - 5.4e-28 97.2 0.1 1.3e-27 96.0 0.1 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Fer2_4 PF13510.6 AID34208.1 - 3e-23 81.6 1.3 6.6e-23 80.6 0.7 2.0 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Molybdop_Fe4S4 PF04879.16 AID34208.1 - 1.1e-16 60.6 1.3 3e-16 59.1 1.3 1.8 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4_7 PF12838.7 AID34208.1 - 2.7e-12 47.1 1.5 4.5e-08 33.6 5.7 3.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID34208.1 - 2.2e-07 30.9 6.8 2.2e-07 30.9 6.8 3.1 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 AID34208.1 - 3.3e-07 29.8 20.6 5.3e-07 29.2 2.4 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 AID34208.1 - 4.1e-07 30.0 6.6 4.1e-07 30.0 6.6 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 AID34208.1 - 3.5e-05 23.7 21.8 0.0018 18.3 1.6 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 AID34208.1 - 0.00013 22.3 6.8 0.00013 22.3 6.8 3.0 5 0 0 5 5 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID34208.1 - 0.00021 21.3 13.2 0.00021 21.3 13.2 2.8 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 AID34208.1 - 0.0045 17.5 14.2 0.014 16.0 10.2 3.4 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID34208.1 - 0.0059 16.6 3.9 0.0059 16.6 3.9 3.6 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 AID34208.1 - 0.0065 17.4 7.6 0.0065 17.4 7.6 3.4 3 1 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 AID34208.1 - 0.025 15.3 5.1 2.2 9.1 0.3 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 AID34208.1 - 0.13 13.1 10.5 0.62 10.9 0.8 3.4 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 AID34208.1 - 0.16 12.2 15.3 2.5 8.3 5.6 3.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 AID34208.1 - 8.2 7.1 15.3 5.3 7.7 4.7 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Complex1_51K PF01512.17 AID34209.1 - 2.8e-45 153.9 0.0 4.7e-45 153.2 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 AID34209.1 - 3.1e-28 97.7 0.3 5.1e-28 97.0 0.3 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 AID34209.1 - 0.00023 21.0 2.2 0.00056 19.7 2.2 1.7 1 0 0 1 1 1 1 SLBB domain 2Fe-2S_thioredx PF01257.19 AID34210.1 - 5e-44 149.7 0.0 5.6e-44 149.5 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin LysR_substrate PF03466.20 AID34211.1 - 1.2e-33 116.2 0.8 1.5e-33 116.0 0.8 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID34211.1 - 6e-16 58.1 0.0 1.1e-15 57.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PhoU_div PF01865.16 AID34212.1 - 1.1e-56 191.5 0.7 1.2e-56 191.4 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 AID34212.1 - 0.00037 20.9 4.6 0.23 11.9 0.3 3.2 1 1 2 3 3 3 2 PhoU domain DUF948 PF06103.11 AID34212.1 - 0.0032 17.7 0.3 0.44 10.8 0.0 2.9 3 1 0 3 3 3 1 Bacterial protein of unknown function (DUF948) PHO4 PF01384.20 AID34213.1 - 6.6e-95 318.0 42.2 3.3e-94 315.7 42.2 1.9 1 1 0 1 1 1 1 Phosphate transporter family Glyoxalase PF00903.25 AID34214.1 - 8.3e-08 32.5 0.2 2e-07 31.2 0.2 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 AID34214.1 - 2e-05 24.5 0.0 0.00015 21.7 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 AID34214.1 - 0.044 14.1 0.0 0.18 12.1 0.0 2.0 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ParA PF10609.9 AID34215.1 - 7.5e-103 343.2 0.1 9.2e-103 343.0 0.1 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase FeS_assembly_P PF01883.19 AID34215.1 - 2.7e-14 53.1 0.4 6.2e-14 51.9 0.4 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein CbiA PF01656.23 AID34215.1 - 7.8e-14 51.8 0.0 1.5e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 AID34215.1 - 4.1e-10 39.8 0.8 4.6e-09 36.4 0.8 2.1 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 AID34215.1 - 2.2e-09 37.0 0.0 3.4e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 AID34215.1 - 4.4e-08 32.9 0.0 0.0012 18.4 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 AID34215.1 - 4.5e-05 22.8 1.5 0.0019 17.4 0.7 2.4 2 1 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.11 AID34215.1 - 0.003 16.9 0.1 0.0061 15.9 0.1 1.5 2 0 0 2 2 2 1 VirC1 protein MeaB PF03308.16 AID34215.1 - 0.018 14.0 0.3 0.035 13.1 0.3 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 AID34215.1 - 0.13 11.8 4.0 0.13 11.9 1.7 2.1 2 1 0 2 2 2 0 AAA domain CLP1_P PF16575.5 AID34215.1 - 0.2 11.4 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop COXG PF06240.13 AID34216.1 - 2.3e-51 173.2 0.0 2.6e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.9 AID34216.1 - 1.5e-06 28.5 0.0 1.7e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 AID34216.1 - 9.1e-06 25.9 0.0 9.9e-06 25.8 0.0 1.3 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2505 PF10698.9 AID34216.1 - 0.0075 16.4 0.2 1.2 9.2 0.0 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF2505) AHSA1 PF08327.11 AID34216.1 - 0.081 13.2 0.0 0.14 12.4 0.0 1.4 1 1 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein ILVD_EDD PF00920.21 AID34217.1 - 1.4e-156 522.2 0.0 1.5e-156 522.0 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family Chrome_Resist PF09828.9 AID34218.1 - 4.8e-50 169.4 0.2 6.2e-50 169.1 0.2 1.1 1 0 0 1 1 1 1 Chromate resistance exported protein Rhodanese PF00581.20 AID34218.1 - 0.0015 19.1 0.0 0.0032 17.9 0.0 1.6 1 1 0 1 1 1 1 Rhodanese-like domain Chromate_transp PF02417.15 AID34219.1 - 1.1e-62 210.8 41.3 9.5e-35 120.1 12.7 2.1 2 0 0 2 2 2 2 Chromate transporter PSI_PsaJ PF01701.18 AID34219.1 - 0.0012 19.3 0.4 0.0012 19.3 0.4 4.3 5 0 0 5 5 5 1 Photosystem I reaction centre subunit IX / PsaJ MTTB PF06253.11 AID34221.1 - 1.5e-167 557.6 0.0 1.7e-167 557.4 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) Aminotran_1_2 PF00155.21 AID34222.1 - 3.2e-18 66.1 0.0 4.6e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 AID34222.1 - 1.3e-10 40.7 0.2 4e-10 39.2 0.2 1.9 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 AID34222.1 - 0.0026 17.4 0.0 0.023 14.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 AID34222.1 - 0.089 12.8 0.0 0.28 11.2 0.0 1.9 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PGI PF00342.19 AID34223.1 - 2e-200 666.5 0.0 2.3e-200 666.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase HAD_2 PF13419.6 AID34224.1 - 2e-23 83.4 0.0 1.3e-22 80.7 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID34224.1 - 7.3e-19 68.9 1.0 1.9e-18 67.5 1.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID34224.1 - 1.1e-09 38.2 1.4 1.6e-09 37.7 0.1 2.0 2 1 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 AID34224.1 - 1.2e-08 35.6 0.8 1.9e-08 35.0 0.8 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID34224.1 - 0.002 18.2 0.0 1.3 9.2 0.0 2.4 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID34224.1 - 0.017 14.9 1.0 0.072 12.8 0.0 2.3 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase DUF2190 PF09956.9 AID34224.1 - 0.24 11.9 2.1 13 6.3 0.7 2.8 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2190) PrmA PF06325.13 AID34225.1 - 3.7e-11 43.0 1.5 5.1e-11 42.5 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 AID34225.1 - 5.2e-10 39.1 0.1 7.7e-10 38.6 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_16 PF10294.9 AID34225.1 - 2.1e-08 34.1 0.0 4.3e-08 33.1 0.0 1.4 1 1 0 1 1 1 1 Lysine methyltransferase Methyltransf_25 PF13649.6 AID34225.1 - 2.1e-07 31.5 0.1 3.5e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 AID34225.1 - 3.7e-05 23.4 0.0 5.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 AID34225.1 - 0.00036 21.1 0.0 0.00061 20.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID34225.1 - 0.0047 16.7 0.0 0.0059 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 AID34225.1 - 0.0063 16.3 0.1 0.0086 15.8 0.1 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 AID34225.1 - 0.044 13.6 0.0 0.051 13.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 AID34225.1 - 0.13 13.0 0.0 0.38 11.5 0.0 1.7 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 AID34225.1 - 0.23 11.0 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase AMP-binding PF00501.28 AID34227.1 - 9.7e-104 347.3 0.0 1.3e-103 346.9 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 AID34227.1 - 8.9e-18 65.1 0.4 8.9e-18 65.1 0.4 2.8 2 1 0 2 2 2 1 AMP-binding enzyme C-terminal domain TrbI PF03743.14 AID34227.1 - 0.21 11.4 1.1 0.48 10.2 1.1 1.6 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein Mif2_N PF15624.6 AID34227.1 - 4.4 8.0 7.3 8.5 7.1 7.3 1.4 1 0 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal SBP_bac_5 PF00496.22 AID34228.1 - 3.2e-88 296.2 11.9 3.9e-88 295.9 11.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 AID34229.1 - 1.8e-44 151.7 15.8 3.6e-44 150.7 15.8 1.5 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID34230.1 - 2.8e-32 112.0 13.1 2.8e-32 112.0 13.1 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID34230.1 - 5.2e-13 48.8 2.2 5.2e-13 48.8 2.2 4.2 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 AID34231.1 - 1.9e-27 96.5 0.0 2.6e-27 96.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 AID34231.1 - 4.2e-07 29.6 0.0 6.5e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 AID34231.1 - 0.00036 21.0 0.0 0.00067 20.1 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID34231.1 - 0.00044 20.2 0.1 0.0038 17.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34231.1 - 0.00064 20.0 0.1 0.012 15.8 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 AID34231.1 - 0.0012 18.6 0.0 0.0021 17.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.17 AID34231.1 - 0.096 12.4 0.0 7.4 6.3 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 AID34231.1 - 0.14 11.7 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 AID34232.1 - 5.2e-31 108.0 0.0 6.9e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34232.1 - 3.2e-08 33.7 0.2 0.00017 21.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34232.1 - 3.8e-07 30.4 0.4 7.4e-06 26.3 0.4 2.1 1 1 0 1 1 1 1 AAA domain oligo_HPY PF08352.12 AID34232.1 - 4.1e-06 27.2 0.0 7.2e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 AID34232.1 - 2.4e-05 23.9 0.2 0.00026 20.5 0.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Sigma54_activat PF00158.26 AID34232.1 - 0.00098 18.9 0.2 0.045 13.5 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_29 PF13555.6 AID34232.1 - 0.002 17.9 0.1 0.0037 17.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID34232.1 - 0.0047 16.8 0.0 0.0081 16.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 AID34232.1 - 0.0048 16.7 0.5 0.045 13.5 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein TniB PF05621.11 AID34232.1 - 0.005 16.3 0.2 0.91 8.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein AAA_23 PF13476.6 AID34232.1 - 0.0078 16.7 0.0 0.011 16.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID34232.1 - 0.0096 16.3 0.3 0.015 15.7 0.3 1.5 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 AID34232.1 - 0.011 15.1 0.0 0.025 14.0 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 AID34232.1 - 0.02 14.8 0.5 0.053 13.4 0.1 1.8 2 1 0 2 2 2 0 NACHT domain AAA PF00004.29 AID34232.1 - 0.048 14.1 0.0 0.51 10.8 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 AID34232.1 - 0.052 12.7 0.1 0.11 11.6 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain AAA_25 PF13481.6 AID34232.1 - 0.093 12.3 0.1 0.88 9.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 AID34232.1 - 0.096 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_13 PF13166.6 AID34232.1 - 0.1 11.2 0.1 1.6 7.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 AID34232.1 - 0.13 12.0 0.1 0.23 11.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID34232.1 - 0.18 11.5 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 AID34232.1 - 0.19 12.1 0.0 0.42 11.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase DUF87 PF01935.17 AID34232.1 - 0.28 11.2 1.3 0.44 10.6 0.7 1.5 2 0 0 2 2 2 0 Helicase HerA, central domain Aminotran_5 PF00266.19 AID34233.1 - 4.2e-57 193.8 0.0 6.4e-55 186.6 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 AID34233.1 - 9.8e-06 25.1 0.1 1.6e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 AID34233.1 - 0.0025 17.1 0.0 0.0045 16.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 AID34233.1 - 0.01 14.4 0.0 0.014 14.0 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme BPD_transp_1 PF00528.22 AID34234.1 - 2.5e-25 89.3 11.5 2.5e-25 89.3 11.5 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Wzy_C PF04932.15 AID34234.1 - 0.56 9.8 7.3 0.037 13.6 2.4 1.6 2 0 0 2 2 2 0 O-Antigen ligase SBP_bac_3 PF00497.20 AID34235.1 - 1.3e-59 201.4 0.6 1.4e-59 201.2 0.6 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID34235.1 - 2.5e-08 34.1 0.4 0.00018 21.7 0.0 3.0 2 1 1 3 3 3 2 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 AID34235.1 - 2.1e-07 31.1 1.1 1.6e-06 28.2 0.2 2.0 1 1 1 2 2 2 1 NMT1/THI5 like Phosphonate-bd PF12974.7 AID34235.1 - 0.0065 16.1 0.3 0.012 15.3 0.3 1.5 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Ribosom_S12_S23 PF00164.25 AID34235.1 - 0.057 13.0 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S12/S23 HpcH_HpaI PF03328.14 AID34236.1 - 2e-37 128.5 0.4 2.4e-37 128.2 0.4 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family UPF0052 PF01933.18 AID34236.1 - 0.032 13.5 0.1 0.038 13.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 UPF0164 PF03687.13 AID34236.1 - 0.091 11.5 1.3 0.12 11.1 1.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0164) CoA_binding_2 PF13380.6 AID34236.1 - 0.12 12.9 1.4 16 6.0 0.2 2.3 1 1 1 2 2 2 0 CoA binding domain Bac_luciferase PF00296.20 AID34237.1 - 3.5e-68 230.4 6.8 4.1e-68 230.1 6.8 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Ribonuc_L-PSP PF01042.21 AID34238.1 - 1e-19 70.7 0.1 1.3e-19 70.4 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Ag332 PF04671.12 AID34238.1 - 0.19 11.7 0.3 18 5.4 0.3 2.4 2 0 0 2 2 2 0 Erythrocyte membrane-associated giant protein antigen 332 Acyl-CoA_dh_1 PF00441.24 AID34239.1 - 3.7e-43 147.3 7.1 5.9e-43 146.7 7.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 AID34239.1 - 4.7e-24 85.2 8.4 1.1e-23 84.0 8.4 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 AID34239.1 - 2.8e-22 78.7 0.0 5.4e-22 77.8 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 AID34239.1 - 2.1e-07 31.6 0.3 8.3e-07 29.7 0.0 2.2 3 1 0 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain ECH_1 PF00378.20 AID34240.1 - 3.5e-42 144.4 0.1 4e-42 144.3 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 AID34240.1 - 1.1e-24 87.6 1.3 3.7e-23 82.5 0.2 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase APOBEC_C PF05240.14 AID34240.1 - 0.061 13.3 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 APOBEC-like C-terminal domain Peptidase_S49 PF01343.18 AID34240.1 - 0.14 12.1 0.3 0.38 10.7 0.1 1.8 2 0 0 2 2 2 0 Peptidase family S49 APOBEC2 PF18772.1 AID34240.1 - 0.19 11.8 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 APOBEC2 MarR_2 PF12802.7 AID34241.1 - 1.4e-11 44.1 0.1 2.8e-11 43.1 0.1 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 AID34241.1 - 1e-10 41.4 0.0 1.8e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 AID34241.1 - 2.1e-06 28.1 0.2 6.9e-06 26.5 0.1 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_34 PF13601.6 AID34241.1 - 0.00041 20.5 0.0 0.00081 19.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.12 AID34241.1 - 0.0088 16.2 0.0 0.24 11.6 0.0 2.1 1 1 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_24 PF13412.6 AID34241.1 - 0.024 14.2 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.14 AID34241.1 - 0.031 14.2 0.0 0.066 13.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF1495 PF07381.11 AID34241.1 - 0.063 13.1 0.0 1.3 8.9 0.0 2.2 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) Fe_dep_repress PF01325.19 AID34241.1 - 0.09 13.0 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Phenol_Hydrox PF02332.18 AID34241.1 - 0.11 12.0 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Methane/Phenol/Toluene Hydroxylase CPSF_A PF03178.15 AID34241.1 - 0.16 11.3 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 CPSF A subunit region RPA_C PF08784.11 AID34241.1 - 0.22 12.2 0.0 0.39 11.4 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal adh_short PF00106.25 AID34242.1 - 4.5e-56 189.4 5.2 5.9e-56 189.0 5.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID34242.1 - 1.4e-53 181.9 8.9 1.8e-53 181.5 8.9 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID34242.1 - 1.4e-12 47.9 2.2 2.2e-12 47.2 2.2 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID34242.1 - 2.9e-05 23.6 0.2 0.00024 20.7 0.2 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID34242.1 - 0.0014 18.5 4.5 0.0022 17.9 4.5 1.4 1 1 0 1 1 1 1 NAD(P)H-binding THF_DHG_CYH_C PF02882.19 AID34242.1 - 0.0023 17.3 0.1 0.0067 15.8 0.0 1.8 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ApbA PF02558.16 AID34242.1 - 0.0044 16.7 0.2 0.0073 16.0 0.2 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA IlvN PF07991.12 AID34242.1 - 0.0072 15.9 0.8 0.026 14.1 0.6 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 AID34242.1 - 0.013 15.4 2.0 0.031 14.1 0.4 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_transf_4 PF13439.6 AID34242.1 - 0.033 14.2 0.0 0.86 9.6 0.0 2.2 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DUF4791 PF16039.5 AID34242.1 - 0.04 13.5 0.2 0.067 12.7 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) Glyco_trans_4_4 PF13579.6 AID34242.1 - 0.059 13.8 0.5 0.52 10.7 0.1 2.2 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain RmlD_sub_bind PF04321.17 AID34242.1 - 0.06 12.4 0.1 0.11 11.6 0.1 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain Sua5_yciO_yrdC PF01300.18 AID34242.1 - 0.14 11.7 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Telomere recombination Oxidored_FMN PF00724.20 AID34243.1 - 5.1e-66 223.3 0.0 7e-66 222.8 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family FAD_binding_3 PF01494.19 AID34243.1 - 4.2e-07 29.6 0.1 5.8e-05 22.5 0.1 2.5 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 AID34243.1 - 2.3e-05 23.8 0.0 5.1e-05 22.6 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 AID34243.1 - 0.00051 18.9 0.0 0.0012 17.6 0.0 1.6 1 1 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 AID34243.1 - 0.0019 18.4 0.0 0.0095 16.1 0.0 2.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 AID34243.1 - 0.005 17.4 0.0 0.12 12.9 0.0 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Glyoxalase PF00903.25 AID34244.1 - 8.7e-09 35.7 0.0 5.7e-08 33.0 0.0 1.9 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 AID34244.1 - 3.1e-08 33.8 0.0 4.7e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 AID34244.1 - 0.0056 16.8 0.0 0.12 12.5 0.0 2.1 1 1 0 1 1 1 1 Glyoxalase-like domain ABC_tran PF00005.27 AID34245.1 - 1.1e-30 106.9 0.0 1.5e-30 106.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34245.1 - 5.9e-08 32.9 0.4 0.0049 16.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34245.1 - 4.4e-06 26.3 0.0 9.2e-06 25.2 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34245.1 - 4.8e-05 23.0 0.1 7.9e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 AID34245.1 - 7.2e-05 23.1 0.0 0.0003 21.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID34245.1 - 0.00065 20.1 0.2 0.0012 19.3 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain oligo_HPY PF08352.12 AID34245.1 - 0.0031 18.0 0.0 0.0056 17.2 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_23 PF13476.6 AID34245.1 - 0.0071 16.9 0.0 0.011 16.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 AID34245.1 - 0.015 15.2 0.0 0.042 13.8 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_25 PF13481.6 AID34245.1 - 0.023 14.3 0.2 0.32 10.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 AID34245.1 - 0.025 14.6 0.0 0.049 13.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 AID34245.1 - 0.039 14.5 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 AID34245.1 - 0.039 13.7 0.0 0.076 12.8 0.0 1.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family DUF2813 PF11398.8 AID34245.1 - 0.04 13.2 0.0 0.061 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) ATPase PF06745.13 AID34245.1 - 0.048 13.0 0.7 0.092 12.1 0.1 1.6 2 0 0 2 2 2 0 KaiC AAA_30 PF13604.6 AID34245.1 - 0.1 12.3 0.3 0.28 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 AID34245.1 - 0.11 12.4 0.1 0.43 10.5 0.0 1.9 2 0 0 2 2 2 0 NACHT domain Rad51 PF08423.11 AID34245.1 - 0.17 11.1 0.0 0.44 9.8 0.0 1.6 2 0 0 2 2 2 0 Rad51 ABC_tran PF00005.27 AID34246.1 - 4.7e-25 88.7 0.0 7.2e-25 88.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34246.1 - 3.4e-08 33.7 0.7 8.6e-07 29.0 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 AID34246.1 - 7.7e-08 32.7 0.0 1.5e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 AID34246.1 - 0.00042 19.8 0.0 0.0018 17.8 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 AID34246.1 - 0.0018 18.6 0.8 0.024 14.9 0.8 2.1 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 AID34246.1 - 0.015 14.7 0.1 0.069 12.5 0.1 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA PF00004.29 AID34246.1 - 0.048 14.1 0.1 0.12 12.8 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BPD_transp_1 PF00528.22 AID34247.1 - 9.5e-25 87.4 13.4 9.5e-25 87.4 13.4 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID34247.1 - 0.00029 20.7 0.2 0.00029 20.7 0.2 3.7 4 1 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 AID34248.1 - 6.3e-31 107.5 14.1 6.3e-31 107.5 14.1 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Pneumo_NS1 PF03438.13 AID34248.1 - 0.0032 17.6 0.1 0.006 16.7 0.1 1.4 1 0 0 1 1 1 1 Pneumovirus NS1 protein SBP_bac_5 PF00496.22 AID34249.1 - 1.8e-72 244.4 4.7 2.5e-72 244.0 4.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4092 PF13322.6 AID34249.1 - 0.04 13.8 0.0 6.1 6.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4092) Amino_oxidase PF01593.24 AID34250.1 - 1.5e-10 41.0 0.9 1.9e-10 40.7 0.0 1.6 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 AID34250.1 - 3.8e-10 39.9 0.3 1.1e-09 38.3 0.3 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID34250.1 - 0.00034 20.3 6.8 0.38 10.3 0.0 2.9 2 1 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 AID34250.1 - 0.00067 19.0 0.4 0.0012 18.1 0.1 1.5 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 AID34250.1 - 0.0011 17.8 0.6 0.058 12.1 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein MCRA PF06100.11 AID34250.1 - 0.017 13.9 0.1 0.028 13.2 0.1 1.3 1 0 0 1 1 1 0 MCRA family Cyclase PF04199.13 AID34251.1 - 4.5e-32 111.1 0.3 5.9e-32 110.8 0.3 1.1 1 0 0 1 1 1 1 Putative cyclase NAD_binding_8 PF13450.6 AID34252.1 - 4.6e-13 49.2 0.1 1.5e-12 47.6 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 AID34252.1 - 5.5e-11 42.4 0.2 0.00045 19.6 0.0 2.7 2 1 0 3 3 3 2 Flavin containing amine oxidoreductase HI0933_like PF03486.14 AID34252.1 - 0.0018 17.1 0.6 0.071 11.8 0.4 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 AID34252.1 - 0.0031 16.7 5.6 0.0085 15.2 0.6 2.5 3 0 0 3 3 3 1 FAD binding domain Pyr_redox PF00070.27 AID34252.1 - 0.0046 17.5 0.5 0.013 16.1 0.2 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 AID34252.1 - 0.0083 14.7 0.1 0.051 12.1 0.0 2.0 2 0 0 2 2 2 1 GDP dissociation inhibitor Pyr_redox_2 PF07992.14 AID34252.1 - 0.0097 15.2 0.1 0.022 14.0 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 AID34252.1 - 0.011 15.4 8.9 0.15 11.6 8.9 2.6 1 1 0 1 1 1 0 FAD dependent oxidoreductase FAD_oxidored PF12831.7 AID34252.1 - 0.012 15.0 1.0 0.017 14.5 0.4 1.5 2 0 0 2 2 2 0 FAD dependent oxidoreductase Thi4 PF01946.17 AID34252.1 - 0.024 13.9 0.2 0.042 13.1 0.2 1.4 1 0 0 1 1 1 0 Thi4 family GMC_oxred_N PF00732.19 AID34252.1 - 0.14 11.5 0.7 0.61 9.4 0.1 2.2 3 0 0 3 3 3 0 GMC oxidoreductase MarR PF01047.22 AID34253.1 - 8.4e-11 41.6 0.1 1.9e-10 40.5 0.1 1.6 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 AID34253.1 - 1.7e-10 40.6 0.1 2.5e-10 40.1 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 AID34253.1 - 1.1e-07 31.9 0.0 4.6e-07 29.9 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_27 PF13463.6 AID34253.1 - 6.8e-07 29.7 0.2 1.4e-06 28.6 0.2 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 AID34253.1 - 0.00038 20.3 0.0 0.00059 19.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 AID34253.1 - 0.0025 17.6 0.1 0.0048 16.7 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain PadR PF03551.14 AID34253.1 - 0.0028 17.6 0.0 0.0051 16.7 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_5 PF01022.20 AID34253.1 - 0.0035 17.2 0.0 0.0075 16.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TetR_C_28 PF17937.1 AID34253.1 - 0.0043 17.5 0.1 0.79 10.2 0.0 2.3 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_Crp_2 PF13545.6 AID34253.1 - 0.048 13.6 0.2 0.13 12.2 0.1 1.7 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 AID34253.1 - 0.075 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 AID34253.1 - 0.12 12.7 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator TPP_enzyme_C PF02775.21 AID34254.1 - 1.2e-20 73.8 0.0 2.4e-20 72.9 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 AID34254.1 - 0.0029 16.9 0.0 0.096 11.9 0.0 2.2 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Fer4_10 PF13237.6 AID34254.1 - 0.004 17.2 1.9 0.004 17.2 1.9 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 AID34254.1 - 0.011 15.3 0.2 0.06 13.0 0.2 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_8 PF13183.6 AID34254.1 - 0.19 12.2 1.4 1.3 9.6 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 AID34254.1 - 4.7 8.0 5.6 17 6.3 0.3 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.27 AID34254.1 - 5.6 6.9 13.7 4.1 7.4 2.6 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain POR PF01558.18 AID34255.1 - 1e-17 64.8 1.8 1.5e-17 64.2 1.8 1.3 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding PF00501.28 AID34257.1 - 1.3e-66 225.0 0.0 1.9e-66 224.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Acyltransferase PF01553.21 AID34257.1 - 1.7e-14 53.6 0.0 9.6e-14 51.1 0.0 2.3 2 0 0 2 2 2 1 Acyltransferase MFS_1 PF07690.16 AID34257.1 - 5.6e-13 48.5 57.1 2.7e-12 46.3 36.0 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily AMP-binding_C PF13193.6 AID34257.1 - 0.096 13.7 0.3 0.28 12.2 0.3 1.9 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DUF1501 PF07394.12 AID34259.1 - 5.4e-46 157.4 0.1 7.8e-46 156.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) DUF1800 PF08811.11 AID34260.1 - 1.6e-137 459.1 0.1 1.8e-137 458.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1800) DUF4781 PF16013.5 AID34261.1 - 1.3 7.8 2.8 1.4 7.7 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Metal_resist PF13801.6 AID34262.1 - 2.4e-25 89.2 13.1 3.1e-25 88.8 13.1 1.1 1 0 0 1 1 1 1 Heavy-metal resistance Cdh1_DBD_1 PF18196.1 AID34262.1 - 0.11 12.8 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 DDE_Tnp_IS240 PF13610.6 AID34262.1 - 0.18 12.1 0.1 0.23 11.7 0.1 1.2 1 0 0 1 1 1 0 DDE domain Sigma70_r2 PF04542.14 AID34265.1 - 1.4e-20 72.8 3.5 2.4e-20 72.1 3.5 1.3 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 AID34265.1 - 9.3e-11 41.2 1.6 1.7e-10 40.4 1.6 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID34265.1 - 1.8e-05 24.1 0.8 3.1e-05 23.4 0.8 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 DUF134 PF02001.16 AID34265.1 - 0.00058 20.4 0.1 0.0012 19.4 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function DUF134 Sigma70_ECF PF07638.11 AID34265.1 - 0.031 14.2 0.4 0.22 11.4 0.4 2.2 1 1 0 1 1 1 0 ECF sigma factor EF-hand_5 PF13202.6 AID34266.1 - 1.9e-15 55.6 4.5 1.4e-05 24.4 0.3 3.1 2 1 1 3 3 3 3 EF hand EF-hand_1 PF00036.32 AID34266.1 - 8.8e-13 46.8 1.5 0.00011 21.5 0.2 3.1 2 1 1 3 3 3 3 EF hand EF-hand_6 PF13405.6 AID34266.1 - 1.2e-11 43.5 1.8 0.00047 19.9 0.2 3.1 2 1 1 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 AID34266.1 - 3.5e-09 37.0 0.7 9.3e-05 22.8 0.7 2.9 1 1 1 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 AID34266.1 - 0.00038 20.7 0.1 0.35 11.2 0.0 2.6 1 1 2 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 AID34266.1 - 0.6 10.0 3.1 25 4.8 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF2158 PF09926.9 AID34268.1 - 1.5e-18 66.3 0.2 1.7e-18 66.1 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized small protein (DUF2158) DNA_ligase_A_M PF01068.21 AID34270.1 - 4e-25 88.7 0.0 5.8e-25 88.1 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 AID34270.1 - 3.6e-11 43.5 0.0 9.3e-11 42.2 0.0 1.7 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_A_N PF04675.14 AID34270.1 - 2.2e-08 34.6 0.0 4e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 DNA ligase N terminus mRNA_cap_enzyme PF01331.19 AID34270.1 - 0.0066 16.3 0.0 3.9 7.2 0.0 3.3 3 1 0 3 3 3 1 mRNA capping enzyme, catalytic domain Lactamase_B PF00753.27 AID34271.1 - 1.5e-05 25.1 3.6 0.00016 21.8 3.6 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 AID34271.1 - 1.9e-05 24.3 0.2 0.00045 19.8 0.2 2.3 2 0 0 2 2 2 1 Beta-lactamase superfamily domain RMMBL PF07521.12 AID34271.1 - 0.014 15.4 0.2 0.038 13.9 0.0 1.8 2 0 0 2 2 2 0 Zn-dependent metallo-hydrolase RNA specificity domain Methyltransf_25 PF13649.6 AID34272.1 - 2.4e-10 41.0 0.1 4.8e-10 40.0 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID34272.1 - 1.1e-09 38.8 0.0 2.1e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 AID34272.1 - 1.2e-09 38.2 0.0 1.8e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 AID34272.1 - 7.9e-08 32.1 0.0 1.3e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_12 PF08242.12 AID34272.1 - 9.6e-08 32.7 0.0 1.6e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID34272.1 - 1.1e-06 28.5 0.0 2.2e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TPR_2 PF07719.17 AID34272.1 - 0.0002 21.2 0.1 0.55 10.5 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 AID34272.1 - 0.00044 20.8 0.6 0.0012 19.5 0.6 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID34272.1 - 0.0027 18.4 6.4 0.0028 18.3 2.3 2.7 1 1 1 2 2 2 1 Tetratricopeptide repeat MTS PF05175.14 AID34272.1 - 0.0052 16.3 0.0 0.0089 15.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DREV PF05219.12 AID34272.1 - 0.0089 15.1 0.0 0.016 14.3 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase TPR_19 PF14559.6 AID34272.1 - 0.012 16.1 3.4 0.031 14.8 3.4 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat Ubie_methyltran PF01209.18 AID34272.1 - 0.09 12.1 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MetW PF07021.12 AID34272.1 - 0.097 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW AAA_29 PF13555.6 AID34274.1 - 0.00016 21.3 0.1 0.00036 20.2 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 AID34274.1 - 0.00017 22.1 0.0 0.00042 20.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AID34274.1 - 0.0028 17.7 0.0 0.0047 17.0 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 AID34274.1 - 0.0034 17.9 0.0 0.0034 17.9 0.0 1.4 1 1 0 1 1 1 1 ABC transporter AAA_33 PF13671.6 AID34274.1 - 0.0049 17.0 0.0 0.017 15.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 AID34274.1 - 0.018 14.7 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Cytidylate kinase AAA_28 PF13521.6 AID34274.1 - 0.021 15.1 0.0 0.027 14.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 AID34274.1 - 0.037 14.5 0.0 0.061 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 AID34274.1 - 0.043 13.6 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_24 PF13479.6 AID34274.1 - 0.045 13.5 0.0 0.067 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID34274.1 - 0.057 13.8 0.0 0.11 12.9 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) CobU PF02283.16 AID34274.1 - 0.082 12.5 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase RNA_helicase PF00910.22 AID34274.1 - 0.14 12.6 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 AID34274.1 - 0.14 11.9 0.0 0.32 10.7 0.0 1.5 2 0 0 2 2 2 0 IstB-like ATP binding protein GTP_EFTU PF00009.27 AID34274.1 - 0.14 11.6 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain 2-Hacid_dh_C PF02826.19 AID34275.1 - 1.4e-39 135.3 0.0 1.8e-39 134.9 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 AID34275.1 - 0.00051 20.3 0.0 0.00075 19.7 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 AID34275.1 - 0.07 13.1 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh PF00389.30 AID34275.1 - 0.092 12.4 0.0 0.21 11.3 0.0 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABC_tran PF00005.27 AID34276.1 - 3.7e-61 205.6 0.0 4.6e-30 104.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 AID34276.1 - 1.2e-14 54.5 0.0 5.5e-07 30.0 0.0 2.4 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 AID34276.1 - 6.8e-14 51.8 0.0 3.9e-06 26.5 0.0 2.5 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID34276.1 - 1.1e-10 41.9 9.6 0.0005 20.0 0.0 4.3 2 2 3 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 AID34276.1 - 3.5e-07 30.6 3.4 0.0091 16.3 0.1 3.5 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 AID34276.1 - 6.5e-07 29.0 0.8 0.013 15.2 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 AID34276.1 - 1.4e-06 28.8 1.0 0.0099 16.3 0.0 2.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_25 PF13481.6 AID34276.1 - 7.4e-06 25.7 3.6 0.014 15.0 0.3 3.0 3 1 0 3 3 2 2 AAA domain SbcCD_C PF13558.6 AID34276.1 - 0.00017 21.8 0.8 0.2 11.9 0.1 3.8 3 2 0 3 3 2 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 AID34276.1 - 0.00027 21.4 0.5 0.53 10.7 0.0 3.4 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 AID34276.1 - 0.00055 19.5 0.1 1.3 8.5 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region Mg_chelatase PF01078.21 AID34276.1 - 0.00082 18.8 0.3 0.29 10.5 0.0 2.7 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI DUF2075 PF09848.9 AID34276.1 - 0.00086 18.6 0.0 0.25 10.6 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 AID34276.1 - 0.0013 18.5 0.5 0.82 9.4 0.0 2.8 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_5 PF07728.14 AID34276.1 - 0.0018 18.3 0.4 1.4 9.0 0.0 2.9 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 AID34276.1 - 0.0031 16.8 0.2 0.17 11.0 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain MMR_HSR1 PF01926.23 AID34276.1 - 0.0032 17.5 0.3 0.062 13.4 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 AID34276.1 - 0.0038 16.9 0.0 0.73 9.4 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 AID34276.1 - 0.0046 16.9 2.2 1.9 8.4 0.3 2.4 2 0 0 2 2 2 2 RsgA GTPase NACHT PF05729.12 AID34276.1 - 0.005 16.8 0.4 2.1 8.3 0.2 2.7 2 0 0 2 2 2 1 NACHT domain AAA_18 PF13238.6 AID34276.1 - 0.0058 17.2 0.2 0.29 11.7 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_24 PF13479.6 AID34276.1 - 0.006 16.3 0.4 2.4 7.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain Pox_A32 PF04665.12 AID34276.1 - 0.016 14.7 1.7 3.2 7.2 0.0 2.5 2 0 0 2 2 2 0 Poxvirus A32 protein APS_kinase PF01583.20 AID34276.1 - 0.034 14.0 0.3 2.3 8.1 0.1 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase Sigma54_activat PF00158.26 AID34276.1 - 0.042 13.6 0.5 13 5.5 0.0 3.1 4 0 0 4 4 3 0 Sigma-54 interaction domain AAA_33 PF13671.6 AID34276.1 - 0.051 13.7 2.1 7.2 6.8 0.3 2.9 2 2 0 2 2 2 0 AAA domain ATPase PF06745.13 AID34276.1 - 0.055 12.8 2.6 4.2 6.6 0.3 2.7 3 0 0 3 3 2 0 KaiC PRK PF00485.18 AID34276.1 - 0.061 13.1 0.2 2.7 7.7 0.1 2.5 3 0 0 3 3 2 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 AID34276.1 - 0.078 13.4 0.1 7.6 7.0 0.0 2.6 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 AID34276.1 - 0.094 11.9 0.8 5.3 6.1 0.2 2.4 2 0 0 2 2 2 0 NB-ARC domain AAA_13 PF13166.6 AID34276.1 - 0.11 11.1 0.0 2 7.0 0.0 2.5 3 0 0 3 3 3 0 AAA domain FtsK_SpoIIIE PF01580.18 AID34276.1 - 0.13 11.6 0.7 7.5 5.8 0.2 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family TsaE PF02367.17 AID34276.1 - 0.19 11.7 0.1 13 5.8 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Myosin_head PF00063.21 AID34276.1 - 0.35 9.0 0.4 3.9 5.6 0.0 2.0 2 0 0 2 2 2 0 Myosin head (motor domain) MobB PF03205.14 AID34276.1 - 0.36 10.7 1.4 1.1 9.1 0.3 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.17 AID34276.1 - 0.4 10.7 2.8 15 5.6 0.5 2.6 2 0 0 2 2 2 0 Helicase HerA, central domain PhoH PF02562.16 AID34276.1 - 0.68 9.3 3.6 4.4 6.7 0.2 2.8 3 0 0 3 3 3 0 PhoH-like protein CbiA PF01656.23 AID34276.1 - 1 9.4 5.4 5.4 7.1 1.2 3.1 3 1 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 AID34276.1 - 1.3 8.7 5.8 3.3 7.4 0.9 3.0 3 1 0 3 3 3 0 AAA domain BPD_transp_1 PF00528.22 AID34277.1 - 6.9e-27 94.4 12.6 6.9e-27 94.4 12.6 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID34277.1 - 3.2e-06 27.0 1.0 3.2e-06 27.0 1.0 3.5 3 1 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C DUF805 PF05656.14 AID34277.1 - 0.96 9.9 0.0 0.96 9.9 0.0 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF805) BPD_transp_1 PF00528.22 AID34278.1 - 1.9e-32 112.5 9.7 2.5e-32 112.1 9.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 AID34279.1 - 8.6e-69 232.3 0.3 1.3e-68 231.7 0.3 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 AID34279.1 - 0.0019 18.0 7.1 0.0019 18.0 7.1 2.3 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence SBP_bac_5 PF00496.22 AID34280.1 - 4.8e-59 200.2 7.4 7e-59 199.7 7.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Cytochrom_C PF00034.21 AID34281.1 - 6.5e-09 36.8 0.1 2.4e-08 35.0 0.1 2.0 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 AID34281.1 - 6.2e-06 26.5 2.5 0.00012 22.3 2.5 2.3 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III CTP_transf_3 PF02348.19 AID34282.1 - 2.6e-36 125.6 0.0 3.4e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 AID34282.1 - 4.9e-12 46.5 2.2 1.3e-11 45.2 2.1 1.7 1 1 1 2 2 2 1 MobA-like NTP transferase domain ATPgrasp_N PF18130.1 AID34282.1 - 0.043 14.4 0.5 0.12 13.0 0.5 1.7 1 0 0 1 1 1 0 ATP-grasp N-terminal domain PDT PF00800.18 AID34283.1 - 1e-53 181.9 0.0 1.2e-53 181.6 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase SNARE PF05739.19 AID34283.1 - 1.1 9.3 3.7 4.9 7.2 0.7 2.4 2 0 0 2 2 2 0 SNARE domain Dabb PF07876.12 AID34284.1 - 7.6e-21 74.6 0.2 8.4e-21 74.4 0.2 1.0 1 0 0 1 1 1 1 Stress responsive A/B Barrel Domain VanY PF02557.17 AID34284.1 - 0.13 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase NUDIX PF00293.28 AID34285.1 - 6.2e-15 55.4 0.0 9.5e-15 54.8 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.11 AID34285.1 - 8.7e-13 47.7 9.4 1.4e-12 47.0 9.4 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 AID34285.1 - 5.6e-11 43.0 0.2 1e-10 42.2 0.2 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain DZR PF12773.7 AID34285.1 - 0.00011 22.1 0.9 0.00019 21.4 0.9 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 AID34285.1 - 0.0015 17.9 2.3 0.4 10.2 0.3 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HypA PF01155.19 AID34285.1 - 0.0056 16.7 0.0 0.0085 16.1 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 AID34285.1 - 0.0058 16.3 6.0 0.67 9.8 0.3 2.5 2 0 0 2 2 2 2 zinc-ribbon domain DUF1451 PF07295.11 AID34285.1 - 0.008 16.2 0.1 0.012 15.6 0.1 1.3 1 0 0 1 1 1 1 Zinc-ribbon containing domain Nudix_N_2 PF14803.6 AID34285.1 - 0.022 14.7 4.5 0.94 9.5 0.5 2.4 2 0 0 2 2 2 0 Nudix N-terminal zf-C3HC4_2 PF13923.6 AID34285.1 - 0.026 14.3 2.2 0.05 13.5 2.2 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS91 PF14319.6 AID34285.1 - 0.027 14.5 0.4 0.063 13.3 0.4 1.6 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-C3HC4_3 PF13920.6 AID34285.1 - 0.067 13.1 1.3 0.11 12.3 1.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Cys_box PF17869.1 AID34285.1 - 0.091 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Anosmin cysteine rich domain DUF1272 PF06906.11 AID34285.1 - 0.11 12.6 0.4 0.23 11.6 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) DUF35_N PF12172.8 AID34285.1 - 0.17 11.8 5.8 0.15 11.9 1.1 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RING_5 PF14634.6 AID34285.1 - 0.19 11.7 2.7 0.35 10.8 2.7 1.4 1 0 0 1 1 1 0 zinc-RING finger domain RNHCP PF12647.7 AID34285.1 - 0.22 11.5 1.9 0.37 10.8 1.9 1.4 1 0 0 1 1 1 0 RNHCP domain zf-C3HC4 PF00097.25 AID34285.1 - 0.22 11.4 4.3 0.41 10.6 4.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-tcix PF14952.6 AID34285.1 - 0.23 11.1 4.2 4 7.1 0.5 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding TF_Zn_Ribbon PF08271.12 AID34285.1 - 0.27 10.8 1.0 6.9 6.3 0.4 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding Auto_anti-p27 PF06677.12 AID34285.1 - 0.3 11.3 2.1 0.82 9.9 2.1 1.8 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) OrfB_Zn_ribbon PF07282.11 AID34285.1 - 0.31 11.0 1.7 0.57 10.1 1.7 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C3HC4_4 PF15227.6 AID34285.1 - 0.46 10.7 1.8 0.85 9.8 1.8 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING NOB1_Zn_bind PF08772.11 AID34285.1 - 0.55 10.4 4.7 9.3 6.5 0.7 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Ribosomal_S27 PF01599.19 AID34285.1 - 0.62 10.3 3.9 10 6.3 0.2 2.4 2 0 0 2 2 2 0 Ribosomal protein S27a Zn-ribbon_8 PF09723.10 AID34285.1 - 0.77 9.9 3.0 1.5 9.0 3.0 1.5 1 0 0 1 1 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 AID34285.1 - 0.79 9.5 2.4 2.8 7.7 2.4 1.8 1 1 0 1 1 1 0 A2L zinc ribbon domain RecR PF02132.15 AID34285.1 - 0.87 9.2 2.7 6.4 6.4 0.0 2.3 2 0 0 2 2 2 0 RecR protein UPF0547 PF10571.9 AID34285.1 - 2.6 8.2 5.4 16 5.7 0.2 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1595 PF12760.7 AID34285.1 - 5.7 7.0 7.6 9.3 6.3 1.2 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain HIT PF01230.23 AID34286.1 - 9.4e-19 68.0 0.0 1.1e-18 67.7 0.0 1.1 1 0 0 1 1 1 1 HIT domain DNA_pol3_gamma3 PF12169.8 AID34287.1 - 9.2e-56 187.7 1.7 9.2e-56 187.7 1.7 1.8 2 0 0 2 2 2 1 DNA polymerase III subunits gamma and tau domain III DUF3646 PF12362.8 AID34287.1 - 3.1e-37 127.4 0.1 1.7e-36 125.0 0.0 2.3 2 0 0 2 2 2 1 DNA polymerase III gamma and tau subunits C terminal DNA_pol3_delta2 PF13177.6 AID34287.1 - 8.2e-32 110.2 0.0 1.2e-31 109.8 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 AID34287.1 - 7.4e-11 42.6 0.0 2.9e-10 40.7 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID34287.1 - 2.3e-07 31.2 0.0 5.3e-06 26.8 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 AID34287.1 - 3.7e-06 26.8 0.1 1.1e-05 25.2 0.1 1.8 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID34287.1 - 1e-05 26.0 0.7 5.6e-05 23.6 0.7 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 AID34287.1 - 1.6e-05 24.9 0.2 0.00036 20.5 0.2 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 AID34287.1 - 2.3e-05 24.2 0.1 0.00044 20.0 0.0 2.4 1 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 AID34287.1 - 0.00022 21.3 0.0 0.0017 18.4 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 AID34287.1 - 0.00054 20.5 0.0 0.0015 19.0 0.0 1.8 2 0 0 2 2 1 1 AAA domain DUF815 PF05673.13 AID34287.1 - 0.00062 19.0 0.0 0.0012 18.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_assoc_2 PF16193.5 AID34287.1 - 0.00068 19.9 0.4 0.0017 18.6 0.4 1.7 1 0 0 1 1 1 1 AAA C-terminal domain AAA_19 PF13245.6 AID34287.1 - 0.0018 18.6 0.1 0.0044 17.4 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 AID34287.1 - 0.0026 17.9 0.1 0.034 14.3 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 AID34287.1 - 0.0027 17.5 0.0 0.0057 16.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 AID34287.1 - 0.0046 17.0 0.0 0.0082 16.1 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 AID34287.1 - 0.0056 16.3 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SKI PF01202.22 AID34287.1 - 0.0086 16.2 0.0 0.022 14.9 0.0 1.7 2 0 0 2 2 1 1 Shikimate kinase CbiA PF01656.23 AID34287.1 - 0.028 14.5 0.0 0.1 12.6 0.0 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TIP49 PF06068.13 AID34287.1 - 0.046 12.9 0.0 1.8 7.7 0.0 2.1 2 0 0 2 2 2 0 TIP49 P-loop domain Thymidylate_kin PF02223.17 AID34287.1 - 0.14 11.8 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Thymidylate kinase AAA_7 PF12775.7 AID34287.1 - 0.18 11.3 0.0 2.3 7.7 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region YbaB_DNA_bd PF02575.16 AID34288.1 - 3.3e-30 104.1 4.0 3.8e-30 104.0 4.0 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family HSBP1 PF06825.12 AID34288.1 - 0.071 13.0 1.7 0.1 12.4 0.4 1.9 2 0 0 2 2 2 0 Heat shock factor binding protein 1 TrbC_Ftype PF09673.10 AID34288.1 - 0.11 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein Hydrolase_2 PF07486.12 AID34290.1 - 2.6e-17 63.6 0.1 7.4e-17 62.1 0.0 1.8 2 0 0 2 2 2 1 Cell Wall Hydrolase SARG PF15385.6 AID34290.1 - 7.5 5.7 8.9 10 5.2 8.9 1.1 1 0 0 1 1 1 0 Specifically androgen-regulated gene protein Toprim_4 PF13662.6 AID34291.1 - 4.8e-25 87.8 0.1 7.7e-25 87.2 0.1 1.3 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 AID34291.1 - 6.8e-15 54.4 0.9 1.4e-14 53.4 0.9 1.5 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 AID34291.1 - 1.2e-05 25.5 0.2 2.5e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 Toprim domain PHF5 PF03660.14 AID34291.1 - 0.0059 16.8 0.1 0.0097 16.1 0.1 1.3 1 0 0 1 1 1 1 PHF5-like protein HHH_5 PF14520.6 AID34291.1 - 0.091 13.4 0.1 0.4 11.3 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain SLT_2 PF13406.6 AID34292.1 - 7.8e-95 317.5 0.0 9.3e-95 317.2 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase SLT domain PG_binding_1 PF01471.18 AID34292.1 - 1.7e-06 28.1 0.1 7e-06 26.2 0.0 2.2 3 0 0 3 3 3 1 Putative peptidoglycan binding domain Glucosaminidase PF01832.20 AID34292.1 - 0.0029 18.1 0.0 0.0071 16.8 0.0 1.7 2 0 0 2 2 2 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SBP_bac_5 PF00496.22 AID34293.1 - 5e-90 302.2 8.6 6.2e-90 301.9 8.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 AID34294.1 - 1.5e-43 148.7 13.2 1.5e-43 148.7 13.2 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID34295.1 - 4.7e-30 104.7 10.8 4.7e-30 104.7 10.8 2.2 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 AID34295.1 - 4.7e-12 45.7 2.3 4.7e-12 45.7 2.3 3.4 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C EpuA PF11772.8 AID34295.1 - 0.11 12.2 7.3 2.3 8.0 0.1 3.3 3 0 0 3 3 3 0 DNA-directed RNA polymerase subunit beta ABC_tran PF00005.27 AID34296.1 - 3e-20 73.1 0.0 3.9e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 AID34296.1 - 8.1e-05 23.1 0.0 0.00016 22.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 AID34296.1 - 0.0021 17.9 0.3 0.029 14.2 0.0 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34296.1 - 0.0047 16.4 0.0 0.0075 15.7 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 AID34297.1 - 3.3e-34 118.4 0.0 4.4e-34 117.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34297.1 - 2e-13 50.8 4.1 1.5e-07 31.6 0.4 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34297.1 - 4.1e-08 32.9 0.1 5.8e-07 29.2 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 AID34297.1 - 7.6e-06 26.4 0.3 1.2e-05 25.8 0.3 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 AID34297.1 - 3.3e-05 24.3 0.1 0.0003 21.2 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 AID34297.1 - 7.5e-05 22.4 0.1 0.00014 21.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_5 PF07728.14 AID34297.1 - 8.4e-05 22.6 0.4 0.41 10.6 0.1 2.3 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 AID34297.1 - 0.00026 21.3 0.6 0.002 18.4 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 AID34297.1 - 0.00041 20.9 0.0 0.00058 20.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 AID34297.1 - 0.0009 19.3 0.1 0.0012 18.9 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 AID34297.1 - 0.0077 16.2 0.1 0.013 15.5 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 AID34297.1 - 0.01 14.7 0.1 2 7.1 0.0 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Dynamin_N PF00350.23 AID34297.1 - 0.024 14.7 0.0 0.066 13.3 0.0 1.7 2 0 0 2 2 2 0 Dynamin family NACHT PF05729.12 AID34297.1 - 0.029 14.3 0.5 0.083 12.8 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_15 PF13175.6 AID34297.1 - 0.037 13.7 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 AID34297.1 - 0.041 14.1 0.2 0.41 10.9 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 AID34297.1 - 0.047 13.4 0.3 0.1 12.3 0.3 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID34297.1 - 0.098 12.2 0.1 7.9 6.0 0.1 2.4 2 0 0 2 2 2 0 AAA domain ACR_tran PF00873.19 AID34298.1 - 2e-151 505.9 15.5 2.6e-151 505.5 15.5 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF3377 PF11857.8 AID34298.1 - 2.7 8.0 4.5 3.6 7.6 0.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) HlyD_D23 PF16576.5 AID34299.1 - 5.4e-18 65.0 3.1 1.3e-17 63.7 3.1 1.7 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID34299.1 - 1.5e-14 54.6 7.1 8.3e-12 45.8 1.0 3.1 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID34299.1 - 1.9e-13 50.0 3.1 2.6e-08 33.6 0.2 3.1 2 0 0 2 2 2 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID34299.1 - 0.00024 20.9 0.2 0.082 12.8 0.1 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme PTS_EIIA_1 PF00358.20 AID34299.1 - 0.045 13.5 0.0 14 5.4 0.0 2.4 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Peptidase_M23 PF01551.22 AID34299.1 - 0.048 13.9 0.3 7.6 6.8 0.0 2.7 3 0 0 3 3 3 0 Peptidase family M23 SAF PF08666.12 AID34299.1 - 0.11 13.1 0.6 3.5 8.3 0.0 3.0 3 0 0 3 3 3 0 SAF domain HlyD_D23 PF16576.5 AID34300.1 - 2.4e-18 66.1 4.6 4.5e-18 65.3 4.6 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 AID34300.1 - 1.4e-13 51.4 10.3 1.3e-10 41.9 2.9 2.9 3 0 0 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 AID34300.1 - 1.1e-08 34.8 8.0 7.8e-08 32.0 2.2 3.0 2 0 0 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 AID34300.1 - 0.0022 17.8 0.2 2 8.3 0.0 2.9 2 0 0 2 2 2 2 Biotin-requiring enzyme Peptidase_M23 PF01551.22 AID34300.1 - 0.0065 16.7 1.2 2.5 8.4 0.0 3.3 3 0 0 3 3 3 1 Peptidase family M23 OEP PF02321.18 AID34300.1 - 0.011 15.6 9.8 0.019 14.7 9.8 1.3 1 0 0 1 1 1 0 Outer membrane efflux protein Peptidase_M41 PF01434.18 AID34300.1 - 0.036 13.9 0.0 0.061 13.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M41 Flagellin_C PF00700.21 AID34300.1 - 0.12 12.7 5.5 0.34 11.3 5.5 1.7 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region DUF4355 PF14265.6 AID34300.1 - 0.33 11.2 2.9 0.61 10.3 2.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4355) Aminotran_3 PF00202.21 AID34301.1 - 8.8e-129 429.7 0.0 1.1e-128 429.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 AID34301.1 - 1.4e-07 31.0 0.0 2.5e-06 26.9 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II Pyr_redox_2 PF07992.14 AID34302.1 - 4.6e-59 200.1 1.0 5.9e-59 199.7 1.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 AID34302.1 - 1.1e-22 80.4 0.0 4.9e-22 78.3 0.0 2.2 3 0 0 3 3 1 1 Reductase C-terminal Pyr_redox PF00070.27 AID34302.1 - 1.8e-14 54.0 9.3 6.7e-12 45.8 2.4 3.8 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 AID34302.1 - 5.3e-11 42.3 0.0 3e-07 30.0 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID34302.1 - 3.5e-08 32.9 6.1 0.025 13.6 0.2 3.1 3 0 0 3 3 3 3 Lycopene cyclase protein NAD_binding_8 PF13450.6 AID34302.1 - 6.8e-08 32.6 4.9 0.00097 19.3 0.7 3.3 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 AID34302.1 - 7.7e-08 32.3 13.5 0.014 15.0 3.9 3.7 3 1 1 4 4 4 3 FAD dependent oxidoreductase HI0933_like PF03486.14 AID34302.1 - 2.4e-06 26.5 8.7 0.29 9.8 0.5 4.0 3 1 1 4 4 4 3 HI0933-like protein FAD_binding_2 PF00890.24 AID34302.1 - 5.1e-06 25.8 10.2 0.011 14.8 0.1 3.7 2 1 2 4 4 4 2 FAD binding domain TrkA_N PF02254.18 AID34302.1 - 2.5e-05 24.5 1.5 0.22 11.8 1.6 2.7 2 1 0 2 2 2 2 TrkA-N domain GIDA PF01134.22 AID34302.1 - 7.2e-05 22.0 8.0 0.0092 15.1 0.1 3.1 2 1 1 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 AID34302.1 - 0.00026 20.4 3.2 0.15 11.3 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain 3HCDH_N PF02737.18 AID34302.1 - 0.0018 18.2 1.1 0.064 13.1 0.8 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 AID34302.1 - 0.0038 17.2 3.4 16 5.4 0.0 4.2 3 1 1 4 4 4 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 AID34302.1 - 0.0073 15.2 4.3 2.5 6.8 0.0 3.1 3 0 0 3 3 3 1 Tryptophan halogenase Amino_oxidase PF01593.24 AID34302.1 - 0.0074 15.6 1.2 2.5 7.3 0.8 2.9 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.6 AID34302.1 - 0.016 15.7 3.7 0.56 10.7 0.4 3.2 3 0 0 3 3 3 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 AID34302.1 - 0.035 13.7 1.4 0.42 10.2 0.2 2.2 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 AID34302.1 - 0.056 12.7 5.3 2 7.6 0.2 3.0 2 1 1 3 3 3 0 Thi4 family ApbA PF02558.16 AID34302.1 - 0.071 12.7 4.0 2 8.1 0.7 3.1 3 1 0 3 3 3 0 Ketopantoate reductase PanE/ApbA K_oxygenase PF13434.6 AID34302.1 - 0.076 12.1 0.0 1 8.4 0.0 2.4 2 1 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) XdhC_C PF13478.6 AID34302.1 - 0.078 13.5 1.0 5.6 7.5 1.1 2.9 2 1 0 2 2 2 0 XdhC Rossmann domain 2-Hacid_dh_C PF02826.19 AID34302.1 - 0.078 12.3 0.1 1.3 8.4 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 AID34302.1 - 0.12 13.3 1.5 2.5 9.0 0.3 2.8 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Shikimate_DH PF01488.20 AID34302.1 - 0.37 10.8 4.0 14 5.7 0.7 2.5 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 AID34302.1 - 1.2 8.4 16.4 0.63 9.3 2.2 3.1 2 1 1 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 AID34302.1 - 2.3 7.5 15.3 1.4 8.2 0.4 3.2 3 1 1 4 4 4 0 FAD dependent oxidoreductase Peptidase_M75 PF09375.10 AID34303.1 - 2.9e-97 325.6 2.6 3.4e-97 325.4 2.6 1.1 1 0 0 1 1 1 1 Imelysin Fer2_BFD PF04324.15 AID34304.1 - 0.0017 18.7 5.2 0.0068 16.7 5.2 1.9 1 1 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Ferritin PF00210.24 AID34305.1 - 6.9e-35 120.0 1.5 8e-35 119.8 1.5 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 AID34305.1 - 1.3e-05 25.6 1.6 6.8e-05 23.3 1.5 1.9 1 1 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 AID34305.1 - 0.006 16.8 0.3 0.12 12.6 0.1 2.1 2 0 0 2 2 2 1 Ferritin-like domain COQ7 PF03232.13 AID34305.1 - 0.043 13.6 0.2 0.096 12.5 0.0 1.6 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DHOR PF06537.11 AID34306.1 - 1e-133 446.6 0.0 1.3e-133 446.3 0.0 1.0 1 0 0 1 1 1 1 Di-haem oxidoreductase, putative peroxidase Cytochrom_C PF00034.21 AID34306.1 - 4.7e-08 34.1 0.0 0.00038 21.5 0.0 2.8 2 1 0 2 2 2 2 Cytochrome c CCP_MauG PF03150.14 AID34306.1 - 0.00046 20.9 0.0 0.42 11.2 0.0 2.4 2 1 0 2 2 2 2 Di-haem cytochrome c peroxidase Cytochrome_CBB3 PF13442.6 AID34306.1 - 0.0017 18.7 0.0 3.1 8.2 0.0 2.8 2 0 0 2 2 2 2 Cytochrome C oxidase, cbb3-type, subunit III Paired_CXXCH_1 PF09699.10 AID34306.1 - 0.078 12.7 0.2 12 5.7 0.0 2.5 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 AID34306.1 - 0.16 12.0 0.0 19 5.4 0.0 2.3 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Peptidase_M75 PF09375.10 AID34307.1 - 1.8e-50 172.0 0.4 2.2e-50 171.8 0.4 1.0 1 0 0 1 1 1 1 Imelysin DUF1513 PF07433.11 AID34308.1 - 1.1e-111 372.9 0.0 1.4e-111 372.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1513) TAT_signal PF10518.9 AID34308.1 - 0.00066 19.4 0.3 0.0028 17.5 0.3 2.2 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Lactonase PF10282.9 AID34308.1 - 0.21 10.8 0.0 0.4 9.9 0.0 1.4 1 0 0 1 1 1 0 Lactonase, 7-bladed beta-propeller Peptidase_M22 PF00814.25 AID34309.1 - 3.7e-25 89.1 3.8 4.6e-25 88.8 3.8 1.1 1 0 0 1 1 1 1 Glycoprotease family Acetyltransf_1 PF00583.25 AID34310.1 - 1.3e-17 64.1 0.1 1.6e-17 63.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID34310.1 - 1.5e-12 47.5 0.0 1.8e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID34310.1 - 6.8e-12 45.2 0.1 1.3e-11 44.3 0.1 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 AID34310.1 - 2.2e-11 44.0 0.1 3e-11 43.6 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 AID34310.1 - 7.9e-08 33.1 0.0 1e-07 32.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 AID34310.1 - 1.6e-05 24.6 0.1 2.8e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 AID34310.1 - 1.8e-05 24.8 0.0 3.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 AID34310.1 - 0.00045 20.4 0.0 0.00065 19.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 AID34310.1 - 0.065 13.4 0.1 0.11 12.7 0.0 1.5 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_18 PF18014.1 AID34310.1 - 0.067 13.0 0.0 0.18 11.6 0.0 1.6 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 AID34310.1 - 0.085 12.9 0.1 0.14 12.2 0.1 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acyltransferase PF01553.21 AID34311.1 - 1.5e-17 63.5 0.0 2.2e-17 63.0 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase Radical_SAM PF04055.21 AID34312.1 - 2.2e-32 112.8 0.0 5.5e-32 111.4 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 AID34312.1 - 4.8e-30 103.5 0.1 8.2e-30 102.7 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 AID34312.1 - 7.7e-09 35.4 0.0 1.4e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 AID34312.1 - 0.0029 17.7 0.1 0.014 15.5 0.1 2.1 1 1 0 1 1 1 1 TRAM domain PhoH PF02562.16 AID34313.1 - 1e-89 299.4 0.0 1.5e-89 298.9 0.0 1.2 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 AID34313.1 - 1.1e-09 38.3 0.0 2.1e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 AID34313.1 - 3.2e-08 34.0 0.1 8.9e-08 32.6 0.1 1.7 1 1 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 AID34313.1 - 0.00022 20.8 0.0 0.018 14.5 0.0 2.2 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain IstB_IS21 PF01695.17 AID34313.1 - 0.0019 18.0 0.0 0.0034 17.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 AID34313.1 - 0.0038 17.6 0.1 0.041 14.3 0.0 2.4 1 1 0 2 2 2 1 AAA ATPase domain SNF2_N PF00176.23 AID34313.1 - 0.007 15.1 0.0 0.011 14.5 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain AAA_11 PF13086.6 AID34313.1 - 0.0094 15.8 0.0 2.7 7.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain KH_1 PF00013.29 AID34313.1 - 0.011 15.6 0.0 0.029 14.2 0.0 1.7 1 0 0 1 1 1 0 KH domain AAA_22 PF13401.6 AID34313.1 - 0.012 15.9 0.1 0.1 12.9 0.1 2.2 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 AID34313.1 - 0.093 12.5 0.0 0.28 10.9 0.0 1.7 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 AID34313.1 - 0.1 12.7 0.1 0.3 11.2 0.0 2.0 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 AID34313.1 - 0.12 12.8 0.1 0.37 11.2 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) UPF0054 PF02130.17 AID34314.1 - 1.9e-34 118.2 0.0 2.3e-34 118.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 CorC_HlyC PF03471.17 AID34315.1 - 1.6e-19 69.7 1.3 2.5e-19 69.0 0.1 2.0 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 AID34315.1 - 3.2e-12 46.7 2.6 5.3e-05 23.6 0.1 2.5 2 0 0 2 2 2 2 CBS domain Glyoxalase PF00903.25 AID34316.1 - 6.5e-06 26.4 0.0 1.1e-05 25.6 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 AID34316.1 - 0.00015 22.5 0.8 0.00033 21.4 0.8 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain CN_hydrolase PF00795.22 AID34317.1 - 8.5e-31 107.2 0.0 1.1e-30 106.8 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF2374 PF09574.10 AID34317.1 - 0.016 15.0 1.1 0.072 12.9 1.1 2.2 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) TruB_C PF09142.11 AID34317.1 - 0.017 14.9 1.2 0.036 13.9 0.4 2.0 2 0 0 2 2 2 0 tRNA Pseudouridine synthase II, C terminal HTH_3 PF01381.22 AID34318.1 - 2.8e-13 49.7 0.0 4.3e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID34318.1 - 7.5e-11 41.9 0.0 1.5e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 AID34318.1 - 2.4e-09 37.4 0.0 4.2e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 AID34318.1 - 0.00013 22.3 0.0 0.0002 21.7 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain YdaS_antitoxin PF15943.5 AID34318.1 - 0.025 14.4 0.0 0.044 13.6 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT S-AdoMet_synt_C PF02773.16 AID34319.1 - 1.8e-64 215.8 0.4 3.4e-64 215.0 0.1 1.6 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 AID34319.1 - 8.4e-35 119.6 0.0 1.5e-34 118.8 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 AID34319.1 - 6.8e-34 116.5 0.0 1.4e-33 115.5 0.0 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain Methyltransf_4 PF02390.17 AID34320.1 - 6.1e-36 123.5 0.0 8.6e-36 123.0 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase DUF150 PF02576.17 AID34322.1 - 1.2e-26 92.9 0.1 2e-26 92.2 0.1 1.3 1 0 0 1 1 1 1 RimP N-terminal domain DUF150_C PF17384.2 AID34322.1 - 1.4e-20 73.2 0.2 3e-20 72.1 0.1 1.6 2 0 0 2 2 2 1 RimP C-terminal SH3 domain NusA_N PF08529.11 AID34323.1 - 4.5e-36 123.9 3.4 4.5e-36 123.9 3.4 2.0 2 0 0 2 2 2 1 NusA N-terminal domain KH_5 PF13184.6 AID34323.1 - 8.7e-29 99.4 0.6 2.4e-26 91.6 0.1 3.3 3 0 0 3 3 3 1 NusA-like KH domain HHH_5 PF14520.6 AID34323.1 - 7.1e-09 36.1 0.0 0.0015 19.1 0.0 3.0 3 0 0 3 3 3 2 Helix-hairpin-helix domain S1 PF00575.23 AID34323.1 - 1.2e-08 35.2 2.4 4.2e-08 33.4 0.4 2.8 2 0 0 2 2 2 1 S1 RNA binding domain KH_2 PF07650.17 AID34323.1 - 1.3e-05 24.9 0.1 0.00018 21.3 0.0 2.8 2 0 0 2 2 2 1 KH domain KH_1 PF00013.29 AID34323.1 - 0.0028 17.4 0.0 0.041 13.7 0.0 2.5 2 0 0 2 2 2 1 KH domain Ribosomal_S17e PF00833.18 AID34323.1 - 0.074 13.0 2.4 0.18 11.7 0.1 2.7 3 0 0 3 3 3 0 Ribosomal S17 DUF448 PF04296.13 AID34324.1 - 4.1e-21 74.6 0.0 6.8e-21 73.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF448) IF-2 PF11987.8 AID34325.1 - 1.4e-37 128.0 0.5 4.8e-37 126.3 0.5 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU PF00009.27 AID34325.1 - 5.8e-35 120.6 4.0 3.5e-33 114.8 4.0 2.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 AID34325.1 - 3.1e-11 43.3 0.2 7.6e-11 42.1 0.2 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase IF2_N PF04760.15 AID34325.1 - 4.3e-10 39.3 0.2 1e-09 38.0 0.0 1.8 2 0 0 2 2 1 1 Translation initiation factor IF-2, N-terminal region IF2_assoc PF08364.11 AID34325.1 - 7.2e-10 39.0 4.4 2.6e-09 37.2 4.4 2.0 1 0 0 1 1 1 1 Bacterial translation initiation factor IF-2 associated region FeoB_N PF02421.18 AID34325.1 - 1e-07 31.6 0.2 2.2e-07 30.5 0.2 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU_D2 PF03144.25 AID34325.1 - 2.6e-07 30.9 2.1 4.9e-05 23.6 1.0 3.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 SRPRB PF09439.10 AID34325.1 - 7.3e-06 25.5 0.1 2.6e-05 23.8 0.1 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 AID34325.1 - 2.8e-05 23.8 0.1 5.7e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Ras family Arf PF00025.21 AID34325.1 - 7e-05 22.3 0.0 0.00014 21.3 0.0 1.5 1 0 0 1 1 1 1 ADP-ribosylation factor family PduV-EutP PF10662.9 AID34325.1 - 0.00038 20.2 0.5 0.001 18.8 0.1 1.9 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 AID34325.1 - 0.00057 20.1 0.0 0.0011 19.2 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 AID34325.1 - 0.0016 18.4 1.2 0.12 12.3 0.1 2.5 1 1 1 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 AID34325.1 - 0.0055 16.8 2.4 4.5 7.3 0.0 3.3 2 1 1 3 3 3 2 Dynamin family MMR_HSR1_Xtn PF16897.5 AID34325.1 - 0.011 15.7 0.1 0.031 14.3 0.1 1.7 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AIG1 PF04548.16 AID34325.1 - 0.035 13.4 0.1 0.082 12.2 0.1 1.6 1 0 0 1 1 1 0 AIG1 family ATP_bind_1 PF03029.17 AID34325.1 - 0.038 13.8 0.0 0.069 12.9 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 AID34325.1 - 0.069 13.6 4.5 0.52 10.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain FBD PF08387.10 AID34325.1 - 0.14 12.1 0.0 0.36 10.8 0.0 1.7 1 0 0 1 1 1 0 FBD RBFA PF02033.18 AID34326.1 - 3e-24 85.5 0.0 3.7e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A TruB_N PF01509.18 AID34327.1 - 5.1e-49 166.5 0.0 7.1e-49 166.0 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 AID34327.1 - 1.5e-13 50.7 0.0 2.5e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB-C_2 PF09157.11 AID34327.1 - 2.4e-06 27.5 0.0 5.5e-06 26.3 0.0 1.7 1 0 0 1 1 1 1 Pseudouridine synthase II TruB, C-terminal CorA PF01544.18 AID34328.1 - 2.1e-65 220.9 0.1 2.5e-65 220.7 0.1 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Ribosomal_S15 PF00312.22 AID34329.1 - 4.7e-37 126.1 1.0 5.3e-37 125.9 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 RNase_PH PF01138.21 AID34330.1 - 1.9e-47 161.1 0.0 9e-23 81.2 0.0 2.4 2 0 0 2 2 2 2 3' exoribonuclease family, domain 1 PNPase PF03726.14 AID34330.1 - 1.4e-26 92.8 0.7 5.5e-26 90.9 0.2 2.3 2 0 0 2 2 2 1 Polyribonucleotide nucleotidyltransferase, RNA binding domain RNase_PH_C PF03725.15 AID34330.1 - 2.8e-21 75.3 1.9 2.5e-12 46.6 0.1 2.5 2 0 0 2 2 2 2 3' exoribonuclease family, domain 2 S1 PF00575.23 AID34330.1 - 1.2e-17 64.0 1.4 2e-17 63.3 0.2 2.0 2 0 0 2 2 2 1 S1 RNA binding domain KH_1 PF00013.29 AID34330.1 - 1.9e-12 46.8 2.5 6.7e-12 45.1 2.5 2.0 1 0 0 1 1 1 1 KH domain PCB_OB PF17092.5 AID34330.1 - 0.008 16.9 0.8 0.023 15.5 0.2 2.1 2 0 0 2 2 2 1 Penicillin-binding protein OB-like domain KH_2 PF07650.17 AID34330.1 - 0.51 10.2 3.8 0.64 9.9 1.2 2.5 3 0 0 3 3 3 0 KH domain MTS PF05175.14 AID34331.1 - 2.7e-49 167.0 0.0 3.7e-49 166.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 AID34331.1 - 0.0015 19.2 0.0 0.0028 18.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID34331.1 - 0.0054 17.4 0.0 0.0085 16.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 AID34331.1 - 0.018 15.0 0.0 7.9 6.5 0.0 2.3 2 0 0 2 2 2 0 Zinc-binding dehydrogenase MTS_N PF08468.11 AID34331.1 - 0.04 14.0 0.0 0.095 12.8 0.0 1.5 2 0 0 2 2 2 0 Methyltransferase small domain N-terminal Cons_hypoth95 PF03602.15 AID34331.1 - 0.054 13.1 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 EAL PF00563.20 AID34332.1 - 2e-75 253.4 0.0 4.8e-75 252.1 0.0 1.6 2 0 0 2 2 2 1 EAL domain GGDEF PF00990.21 AID34332.1 - 7.8e-32 110.3 0.0 1.1e-31 109.7 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain adh_short_C2 PF13561.6 AID34333.1 - 2.1e-86 289.3 0.2 2.3e-86 289.1 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34333.1 - 1.4e-18 67.1 0.1 1.7e-18 66.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 AID34333.1 - 0.0096 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 KR domain ketoacyl-synt PF00109.26 AID34334.1 - 1.3e-38 133.0 3.9 2.5e-38 132.1 3.9 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID34334.1 - 5.2e-30 103.9 0.6 1.9e-29 102.1 0.2 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 AID34334.1 - 0.00076 18.9 0.2 0.071 12.4 0.1 2.3 1 1 1 2 2 2 2 Thiolase, N-terminal domain KAsynt_C_assoc PF16197.5 AID34334.1 - 0.13 12.7 0.0 0.37 11.3 0.0 1.8 2 0 0 2 2 2 0 Ketoacyl-synthetase C-terminal extension FabA PF07977.13 AID34335.1 - 8e-49 164.8 0.0 9.6e-49 164.6 0.0 1.1 1 0 0 1 1 1 1 FabA-like domain FUR PF01475.19 AID34336.1 - 1.8e-20 73.3 0.0 2e-20 73.1 0.0 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_Tnp_Tc3_2 PF01498.18 AID34336.1 - 0.0051 17.0 0.0 0.013 15.8 0.0 1.6 2 0 0 2 2 2 1 Transposase TPR_12 PF13424.6 AID34336.1 - 0.03 14.6 2.4 1.4 9.3 0.6 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat HTH_20 PF12840.7 AID34336.1 - 0.034 14.2 0.9 0.069 13.2 0.9 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 AID34336.1 - 0.04 13.6 0.1 0.067 12.8 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4260 PF14079.6 AID34337.1 - 3.4e-42 143.0 4.6 3.9e-42 142.8 4.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4260) DUF3307 PF11750.8 AID34337.1 - 0.059 13.5 1.3 0.059 13.5 1.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3307) SH3_4 PF06347.13 AID34338.1 - 4.8e-44 148.0 4.1 7.9e-23 80.0 0.3 2.2 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_3 PF08239.11 AID34338.1 - 1.6e-07 31.5 0.1 0.0045 17.2 0.2 2.5 2 1 0 2 2 2 2 Bacterial SH3 domain GW PF13457.6 AID34338.1 - 0.0094 16.5 0.0 4.9 7.8 0.0 2.3 2 0 0 2 2 2 2 GW (Gly-Tryp) dipeptide domain SH3_16 PF18348.1 AID34338.1 - 0.04 13.7 0.5 4.4 7.2 0.0 2.7 3 0 0 3 3 3 0 Bacterial dipeptidyl-peptidase Sh3 domain 2-Hacid_dh_C PF02826.19 AID34339.1 - 4.9e-53 179.1 0.1 1.1e-52 178.0 0.0 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID34339.1 - 7.5e-34 116.3 0.0 8.4e-34 116.1 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 AID34339.1 - 0.00014 22.1 0.1 0.00034 20.8 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 AID34339.1 - 0.031 13.5 0.0 0.047 12.9 0.0 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 AID34339.1 - 0.053 13.1 0.2 1.3 8.5 0.0 2.6 2 1 1 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain GFO_IDH_MocA PF01408.22 AID34339.1 - 0.063 14.1 0.0 0.18 12.7 0.0 1.8 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold XdhC_C PF13478.6 AID34339.1 - 0.071 13.6 0.1 1.4 9.5 0.0 2.7 2 1 0 2 2 2 0 XdhC Rossmann domain F420_oxidored PF03807.17 AID34339.1 - 0.32 11.6 2.1 1.6 9.3 0.0 2.9 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent Acetyltransf_1 PF00583.25 AID34340.1 - 5.7e-15 55.6 0.0 6.6e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID34340.1 - 1.1e-13 51.3 0.0 1.4e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 AID34340.1 - 1.5e-13 51.0 0.0 2e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID34340.1 - 1.6e-05 24.8 0.0 2.2e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 AID34340.1 - 0.00021 21.0 0.1 0.00025 20.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_9 PF13527.7 AID34340.1 - 0.00058 19.9 0.0 0.019 15.1 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1999 PF09390.10 AID34340.1 - 0.0035 17.0 0.1 0.0047 16.6 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1999) Acetyltransf_CG PF14542.6 AID34340.1 - 0.083 13.0 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 AID34340.1 - 0.095 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ThiF PF00899.21 AID34341.1 - 8.3e-61 205.4 0.0 9.5e-61 205.2 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 AID34341.1 - 3.6e-06 27.3 1.8 1.8e-05 25.0 1.8 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain PglD_N PF17836.1 AID34341.1 - 0.00074 20.1 0.2 0.0018 18.9 0.0 1.7 2 0 0 2 2 2 1 PglD N-terminal domain Shikimate_DH PF01488.20 AID34341.1 - 0.00077 19.5 0.1 0.0019 18.3 0.1 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 AID34341.1 - 0.004 17.6 0.0 0.0075 16.7 0.0 1.4 1 1 0 1 1 1 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 AID34341.1 - 0.017 15.0 0.1 0.026 14.4 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 AID34341.1 - 0.086 13.1 0.3 0.19 12.0 0.3 1.6 1 1 0 1 1 1 0 TrkA-N domain SMC_N PF02463.19 AID34342.1 - 1.2e-17 64.1 0.0 1.6e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 AID34342.1 - 6.3e-10 39.3 0.1 0.0001 22.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 AID34342.1 - 8.2e-10 39.5 0.0 1.1e-09 39.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 AID34342.1 - 9.2e-09 35.5 0.0 2e-08 34.3 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 AID34342.1 - 0.00049 19.8 0.0 0.00099 18.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF2813 PF11398.8 AID34342.1 - 0.0054 16.0 0.0 1.9 7.7 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_16 PF13191.6 AID34342.1 - 0.021 15.2 0.4 1.6 9.1 0.0 2.6 2 1 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 AID34342.1 - 0.047 14.2 0.1 0.14 12.7 0.0 1.7 2 0 0 2 2 2 0 ABC transporter MukB PF04310.12 AID34342.1 - 0.11 12.3 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal DNA_pol3_beta_2 PF02767.16 AID34343.1 - 8.7e-39 132.3 0.1 9.9e-32 109.6 0.0 3.1 3 0 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta PF00712.19 AID34343.1 - 3.2e-37 127.3 0.1 2.7e-32 111.4 0.0 3.2 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_3 PF02768.15 AID34343.1 - 1.1e-35 122.0 0.1 1e-34 118.9 0.0 2.2 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain Bac_DnaA PF00308.18 AID34344.1 - 2.4e-33 115.8 0.0 3.5e-33 115.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 AID34344.1 - 9.3e-32 108.9 0.2 2.2e-31 107.7 0.3 1.6 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix LtuA PF17446.2 AID34345.1 - 0.06 13.8 0.0 0.076 13.4 0.0 1.3 1 1 0 1 1 1 0 Late transcription unit A AAA_31 PF13614.6 AID34347.1 - 1.3e-40 139.2 0.1 2.4e-40 138.3 0.0 1.4 2 0 0 2 2 1 1 AAA domain CbiA PF01656.23 AID34347.1 - 1.4e-21 76.8 0.0 3.1e-21 75.8 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 AID34347.1 - 5.3e-12 45.6 0.2 5.6e-07 29.1 0.0 2.2 2 0 0 2 2 2 2 ATPase MipZ CBP_BcsQ PF06564.12 AID34347.1 - 1.4e-09 37.8 0.0 8.5e-09 35.2 0.0 2.1 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 AID34347.1 - 1.2e-07 31.3 0.2 8.3e-06 25.2 0.0 2.2 2 0 0 2 2 2 1 Anion-transporting ATPase ParA PF10609.9 AID34347.1 - 6e-07 29.2 2.2 6.5e-06 25.8 2.2 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 AID34347.1 - 0.00018 21.1 0.0 0.0004 19.9 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MerR_1 PF13411.6 AID34347.1 - 0.00023 21.2 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein ATP_bind_1 PF03029.17 AID34347.1 - 0.00026 20.8 0.0 0.0034 17.2 0.0 2.3 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 AID34347.1 - 0.00045 20.1 0.0 0.001 18.9 0.0 1.6 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MerR PF00376.23 AID34347.1 - 0.00052 19.7 0.0 0.0016 18.1 0.0 1.9 2 0 0 2 2 2 1 MerR family regulatory protein SRP54 PF00448.22 AID34347.1 - 0.0024 17.5 0.1 0.012 15.2 0.1 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain VirC1 PF07015.11 AID34347.1 - 0.0069 15.7 0.0 0.017 14.5 0.0 1.6 2 0 0 2 2 2 1 VirC1 protein Glyco_trans_4_4 PF13579.6 AID34347.1 - 0.025 15.0 0.0 0.083 13.3 0.0 1.8 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain AAA_25 PF13481.6 AID34347.1 - 0.029 14.0 1.0 0.28 10.7 1.0 2.1 1 1 0 1 1 1 0 AAA domain HTH_3 PF01381.22 AID34347.1 - 0.034 14.2 0.1 2.2 8.4 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix HTH_17 PF12728.7 AID34347.1 - 0.092 12.9 0.0 0.32 11.2 0.0 1.9 2 0 0 2 2 1 0 Helix-turn-helix domain ResIII PF04851.15 AID34347.1 - 0.094 12.7 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 AID34347.1 - 0.1 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain RepB PF07506.11 AID34348.1 - 1.6e-25 90.3 0.1 3.4e-25 89.2 0.1 1.6 1 0 0 1 1 1 1 RepB plasmid partitioning protein ParBc PF02195.18 AID34348.1 - 3e-18 65.9 0.2 7.8e-18 64.6 0.2 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain DUF4860 PF16152.5 AID34348.1 - 0.087 12.7 0.0 0.24 11.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) RP-C PF03428.13 AID34349.1 - 4.5e-75 251.1 0.1 7.1e-75 250.5 0.1 1.3 1 0 0 1 1 1 1 Replication protein C N-terminal domain RP-C_C PF11800.8 AID34349.1 - 5.7e-72 242.1 0.0 8.5e-72 241.6 0.0 1.3 1 0 0 1 1 1 1 Replication protein C C-terminal region HTH_IclR PF09339.10 AID34349.1 - 7.5e-05 22.5 1.7 0.001 18.8 0.4 3.0 2 1 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 AID34349.1 - 0.00048 19.9 0.0 0.0013 18.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID34349.1 - 0.0018 18.1 0.0 0.005 16.7 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 AID34349.1 - 0.0064 16.4 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 AID34349.1 - 0.027 14.5 0.0 0.089 12.9 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain DUF982 PF06169.12 AID34352.1 - 3.1e-12 46.4 0.7 3.3e-12 46.3 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) DUF932 PF06067.11 AID34353.1 - 0.023 14.5 0.0 0.038 13.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF932) ParBc PF02195.18 AID34354.1 - 8.3e-07 29.2 0.1 3.2e-06 27.3 0.1 2.1 1 0 0 1 1 1 1 ParB-like nuclease domain HALZ PF02183.18 AID34354.1 - 0.0046 17.1 0.9 0.089 13.0 0.8 2.5 2 0 0 2 2 2 1 Homeobox associated leucine zipper RepB PF07506.11 AID34354.1 - 0.013 15.6 0.1 0.036 14.2 0.1 1.8 1 0 0 1 1 1 0 RepB plasmid partitioning protein DUF4407 PF14362.6 AID34354.1 - 0.019 14.3 0.7 0.033 13.6 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FadA PF09403.10 AID34354.1 - 0.27 11.7 2.0 0.57 10.7 2.0 1.5 1 0 0 1 1 1 0 Adhesion protein FadA DUF1419 PF07215.11 AID34358.1 - 1.1e-09 38.4 0.0 1.2e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1419) HTH_Tnp_1 PF01527.20 AID34360.1 - 2.8e-09 37.2 0.5 2.8e-09 37.2 0.5 2.1 2 0 0 2 2 2 1 Transposase DUF4249 PF14054.6 AID34360.1 - 0.15 11.7 0.0 0.3 10.7 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4249) NYD-SP28_assoc PF14775.6 AID34360.1 - 4.3 7.5 6.5 16 5.7 0.4 2.6 1 1 1 2 2 2 0 Sperm tail C-terminal domain DUF1173 PF06666.11 AID34361.1 - 2.2e-148 494.3 0.0 2.4e-148 494.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1173) AAA_34 PF13872.6 AID34362.1 - 3e-118 394.1 0.0 4.2e-118 393.6 0.0 1.2 1 0 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 Helicase_C_4 PF13871.6 AID34362.1 - 1.7e-85 287.0 0.1 2.7e-85 286.4 0.1 1.3 1 0 0 1 1 1 1 C-terminal domain on Strawberry notch homologue ResIII PF04851.15 AID34362.1 - 0.00031 20.8 0.0 0.00062 19.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MTS PF05175.14 AID34362.1 - 0.00059 19.4 0.0 0.0019 17.8 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain HisG PF01634.18 AID34362.1 - 0.02 14.9 0.1 0.039 13.9 0.1 1.4 1 0 0 1 1 1 0 ATP phosphoribosyltransferase Toprim_3 PF13362.6 AID34363.1 - 3.7e-19 68.9 0.0 6.4e-19 68.1 0.0 1.4 1 0 0 1 1 1 1 Toprim domain MLTR_LBD PF17765.1 AID34363.1 - 0.012 15.7 1.0 0.27 11.4 0.2 2.4 2 0 0 2 2 2 0 MmyB-like transcription regulator ligand binding domain Toprim_2 PF13155.6 AID34363.1 - 0.015 15.7 0.0 0.027 14.9 0.0 1.4 1 0 0 1 1 1 0 Toprim-like YAcAr PF10686.9 AID34364.1 - 1.7e-29 101.5 0.5 4.7e-29 100.1 0.5 1.8 1 0 0 1 1 1 1 YspA, cpYpsA-related SLOG family DUF1778 PF08681.11 AID34364.1 - 7.6e-13 48.2 0.4 4.5e-12 45.7 0.3 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF1778) RHH_1 PF01402.21 AID34364.1 - 0.013 15.4 0.3 0.052 13.5 0.3 2.1 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family Acetyltransf_7 PF13508.7 AID34365.1 - 7.3e-07 29.5 0.0 1.4e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 AID34365.1 - 1.3e-05 25.4 0.0 2.3e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 AID34365.1 - 0.00019 21.4 0.0 0.00051 20.0 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain DUF5441 PF17513.2 AID34365.1 - 0.055 13.2 0.2 0.11 12.2 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5441) DUF736 PF05284.12 AID34367.1 - 1.3e-24 86.0 0.0 1.4e-24 85.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF736) AAA_31 PF13614.6 AID34370.1 - 5.1e-08 33.0 0.1 7.6e-05 22.7 0.0 2.2 1 1 1 2 2 2 2 AAA domain VirC1 PF07015.11 AID34370.1 - 3.7e-07 29.7 0.0 5.4e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 VirC1 protein MipZ PF09140.11 AID34370.1 - 7.6e-07 28.7 1.0 0.0003 20.2 0.0 2.5 2 1 1 3 3 3 2 ATPase MipZ CbiA PF01656.23 AID34370.1 - 2.2e-06 27.8 0.0 3.4e-06 27.1 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CLP1_P PF16575.5 AID34370.1 - 0.00013 21.8 0.0 0.0016 18.3 0.0 2.4 3 0 0 3 3 3 1 mRNA cleavage and polyadenylation factor CLP1 P-loop ParA PF10609.9 AID34370.1 - 0.0007 19.1 0.6 0.002 17.6 0.1 1.7 1 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_30 PF13604.6 AID34370.1 - 0.015 15.0 0.2 0.033 13.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 AID34370.1 - 0.02 14.5 0.0 0.034 13.8 0.0 1.5 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 AID34370.1 - 0.11 12.8 0.0 0.31 11.4 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain MobC PF05713.11 AID34372.1 - 7.8e-05 23.1 0.4 0.00019 21.8 0.2 1.8 2 0 0 2 2 2 1 Bacterial mobilisation protein (MobC) RHH_4 PF13467.6 AID34372.1 - 0.0003 20.6 0.1 0.0024 17.7 0.1 2.1 1 1 1 2 2 2 1 Ribbon-helix-helix domain RHH_1 PF01402.21 AID34372.1 - 0.0012 18.7 1.2 0.003 17.4 0.2 2.2 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family EFG_C PF00679.24 AID34372.1 - 0.074 13.1 0.0 5.5 7.1 0.0 2.3 2 1 0 2 2 2 0 Elongation factor G C-terminus Relaxase PF03432.14 AID34373.1 - 6.1e-09 35.8 0.4 6.1e-09 35.8 0.4 2.6 3 0 0 3 3 3 1 Relaxase/Mobilisation nuclease domain AAA PF00004.29 AID34374.1 - 3.5e-33 114.8 0.0 7.3e-33 113.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 AID34374.1 - 9.6e-06 25.8 0.0 4.2e-05 23.7 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID34374.1 - 0.00014 22.2 1.1 0.093 13.0 0.0 2.9 2 1 1 3 3 3 2 AAA domain RNA_helicase PF00910.22 AID34374.1 - 0.00028 21.2 0.0 0.0006 20.2 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 AID34374.1 - 0.00029 21.2 2.4 0.036 14.4 1.9 3.4 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 AID34374.1 - 0.00053 19.8 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 AID34374.1 - 0.0019 18.2 0.0 0.0095 15.9 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 AID34374.1 - 0.0029 17.5 0.0 0.0047 16.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain ATPase PF06745.13 AID34374.1 - 0.0077 15.6 0.0 0.02 14.2 0.0 1.6 1 1 0 1 1 1 1 KaiC Mg_chelatase PF01078.21 AID34374.1 - 0.017 14.5 0.0 0.089 12.2 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_lid_3 PF17862.1 AID34374.1 - 0.02 14.7 0.2 0.042 13.7 0.2 1.5 1 0 0 1 1 1 0 AAA+ lid domain NACHT PF05729.12 AID34374.1 - 0.024 14.6 0.1 1.7 8.5 0.1 2.4 1 1 1 2 2 2 0 NACHT domain AAA_14 PF13173.6 AID34374.1 - 0.032 14.3 0.0 0.078 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 AID34374.1 - 0.067 12.8 0.0 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 AID34374.1 - 0.071 13.5 0.1 1.7 9.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_7 PF12775.7 AID34374.1 - 0.11 12.0 0.0 0.41 10.1 0.0 1.9 1 1 0 1 1 1 0 P-loop containing dynein motor region Peptidase_S8 PF00082.22 AID34375.1 - 1.9e-24 86.4 0.0 6.8e-24 84.6 0.0 1.7 1 1 0 1 1 1 1 Subtilase family T4SS-DNA_transf PF02534.14 AID34376.1 - 2.4e-84 283.8 0.0 3.2e-84 283.4 0.0 1.1 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer TraG-D_C PF12696.7 AID34376.1 - 1.7e-30 105.6 0.0 2.5e-30 105.0 0.0 1.3 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG TrwB_AAD_bind PF10412.9 AID34376.1 - 1.3e-21 76.9 0.0 3.8e-21 75.4 0.0 1.6 1 1 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain MASE2 PF05230.11 AID34376.1 - 0.031 14.3 0.4 4.4 7.4 0.0 3.3 3 0 0 3 3 3 0 MASE2 domain T2SSE PF00437.20 AID34377.1 - 4e-78 262.2 0.3 4.7e-78 262.0 0.3 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein Dynamin_N PF00350.23 AID34377.1 - 0.0014 18.7 0.0 0.0034 17.5 0.0 1.6 2 0 0 2 2 2 1 Dynamin family AAA_28 PF13521.6 AID34377.1 - 0.0019 18.5 0.1 0.0034 17.6 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_7 PF12775.7 AID34377.1 - 0.0033 16.9 0.0 0.0074 15.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 AID34377.1 - 0.0037 17.6 0.0 0.0061 16.9 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 AID34377.1 - 0.014 14.7 0.0 0.031 13.6 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin RsgA_GTPase PF03193.16 AID34377.1 - 0.042 13.7 0.0 0.51 10.2 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase IIGP PF05049.13 AID34377.1 - 0.043 12.9 0.0 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) MMR_HSR1 PF01926.23 AID34377.1 - 0.067 13.3 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 AID34377.1 - 0.086 12.2 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 AID34377.1 - 0.1 11.5 0.0 0.19 10.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Pox_A32 PF04665.12 AID34377.1 - 0.19 11.2 0.0 0.3 10.5 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein TrbI PF03743.14 AID34378.1 - 1.3e-59 201.2 2.2 2.5e-59 200.3 2.2 1.5 1 0 0 1 1 1 1 Bacterial conjugation TrbI-like protein MAD PF05557.13 AID34378.1 - 2.3 6.5 10.1 3.2 6.0 10.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein Casc1_N PF15927.5 AID34378.1 - 3.2 7.4 13.7 5.3 6.7 13.7 1.2 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus VIR_N PF15912.5 AID34378.1 - 4.3 6.9 9.0 9.8 5.7 9.0 1.5 1 0 0 1 1 1 0 Virilizer, N-terminal PV-1 PF06637.11 AID34378.1 - 5.8 5.6 12.3 8 5.2 12.3 1.1 1 0 0 1 1 1 0 PV-1 protein (PLVAP) Exop_C PF18559.1 AID34378.1 - 6.2 6.7 7.6 0.72 9.7 0.7 2.2 2 0 0 2 2 2 0 Galactose-binding domain-like CagX PF03524.15 AID34379.1 - 4.9e-59 199.6 0.1 5.6e-59 199.4 0.1 1.0 1 0 0 1 1 1 1 Conjugal transfer protein VirB8 PF04335.13 AID34380.1 - 3.7e-63 213.2 3.7 4.3e-63 213.0 3.7 1.0 1 0 0 1 1 1 1 VirB8 protein TrbL PF04610.14 AID34381.1 - 9.9e-31 107.2 26.9 1.7e-30 106.4 26.9 1.4 1 0 0 1 1 1 1 TrbL/VirB6 plasmid conjugal transfer protein TatC PF00902.18 AID34381.1 - 0.28 11.0 16.6 0.023 14.5 11.9 1.4 2 0 0 2 2 2 0 Sec-independent protein translocase protein (TatC) T4SS PF07996.11 AID34383.1 - 2.7e-08 34.5 8.6 5.8e-08 33.4 8.4 1.7 1 1 0 1 1 1 1 Type IV secretion system proteins DUF3035 PF11233.8 AID34383.1 - 0.074 13.3 1.9 0.12 12.6 1.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) SLT PF01464.20 AID34384.1 - 2.6e-13 49.7 0.1 4.6e-13 48.9 0.1 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain DUF3824 PF12868.7 AID34384.1 - 0.075 13.7 0.4 0.17 12.6 0.4 1.5 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) VirB3 PF05101.13 AID34385.1 - 5.6e-18 65.0 0.6 6.8e-18 64.7 0.6 1.0 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein CagE_TrbE_VirB PF03135.14 AID34386.1 - 1.8e-35 123.0 0.0 3.2e-35 122.1 0.0 1.5 1 0 0 1 1 1 1 CagE, TrbE, VirB family, component of type IV transporter system FtsK_SpoIIIE PF01580.18 AID34386.1 - 0.006 16.0 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_10 PF12846.7 AID34386.1 - 0.0096 14.9 0.0 3.1 6.6 0.1 2.4 2 1 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 AID34386.1 - 0.011 16.0 0.0 0.024 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 AID34386.1 - 0.037 13.5 0.1 0.087 12.3 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF87 PF01935.17 AID34386.1 - 0.06 13.4 0.0 0.2 11.7 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain DEAD PF00270.29 AID34386.1 - 0.065 13.0 0.0 0.25 11.1 0.0 1.8 2 0 0 2 2 2 0 DEAD/DEAH box helicase T2SSE PF00437.20 AID34386.1 - 0.066 12.3 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 AID34386.1 - 0.096 11.6 0.0 0.2 10.5 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain TrbC PF04956.13 AID34387.1 - 2e-20 72.8 15.1 2.2e-20 72.7 15.1 1.0 1 0 0 1 1 1 1 TrbC/VIRB2 family SLT PF01464.20 AID34389.1 - 3.1e-19 68.7 0.0 3.8e-19 68.5 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT_2 PF13406.6 AID34389.1 - 0.0076 15.5 0.1 0.012 14.9 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain HTH_3 PF01381.22 AID34392.1 - 5.8e-11 42.3 0.1 7.9e-07 29.0 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix HTH_31 PF13560.6 AID34392.1 - 2.8e-10 40.4 2.4 3.5e-07 30.5 0.0 2.4 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_37 PF13744.6 AID34392.1 - 1.4e-06 28.2 2.6 0.00054 19.9 0.1 2.7 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_26 PF13443.6 AID34392.1 - 6.1e-06 26.6 0.0 5.9e-05 23.4 0.0 2.1 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain DUF2268 PF10026.9 AID34392.1 - 0.002 17.7 0.0 0.0028 17.3 0.0 1.2 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) HTH_19 PF12844.7 AID34392.1 - 0.1 12.6 0.0 0.73 9.9 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain UPF0060 PF02694.15 AID34394.1 - 0.058 13.6 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family DUF5336 PF17270.2 AID34397.1 - 0.04 13.6 0.2 0.2 11.3 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5336) DUF2048 PF09752.9 AID34398.1 - 0.0014 17.8 0.0 0.0037 16.4 0.0 1.7 2 0 0 2 2 2 1 Abhydrolase domain containing 18 UPF0236 PF06782.11 AID34399.1 - 0.0062 15.2 0.1 0.008 14.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0236) Methyltransf_23 PF13489.6 AID34400.1 - 2e-15 57.0 0.0 3.1e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 AID34400.1 - 3.3e-15 56.6 0.0 6.7e-15 55.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 AID34400.1 - 2.4e-10 40.9 0.0 4.6e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 AID34400.1 - 2.8e-09 36.9 0.0 4.2e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 AID34400.1 - 4.4e-09 37.0 0.0 6.4e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 AID34400.1 - 6.4e-05 22.4 0.0 8.3e-05 22.0 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 AID34400.1 - 0.00012 21.9 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 AID34400.1 - 0.00026 20.5 0.0 0.00039 19.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 AID34400.1 - 0.00027 20.5 0.1 0.00044 19.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 AID34400.1 - 0.00036 19.9 0.0 0.00076 18.9 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 AID34400.1 - 0.014 15.0 0.1 0.021 14.4 0.1 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW FtsJ PF01728.19 AID34400.1 - 0.038 14.1 0.0 0.2 11.7 0.0 1.9 2 0 0 2 2 2 0 FtsJ-like methyltransferase Methyltransf_9 PF08003.11 AID34400.1 - 0.071 12.0 0.0 0.096 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) TPMT PF05724.11 AID34400.1 - 0.074 12.7 0.1 0.18 11.4 0.0 1.8 2 1 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 AID34400.1 - 0.24 10.8 0.0 0.38 10.1 0.0 1.3 1 1 0 1 1 1 0 Tellurite resistance protein TehB LodA_C PF18417.1 AID34401.1 - 3.8e-49 166.3 0.1 6.9e-49 165.4 0.1 1.5 1 0 0 1 1 1 1 L-lysine epsilon oxidase C-terminal domain Trp_halogenase PF04820.14 AID34403.1 - 7.3e-13 48.2 4.4 6.8e-07 28.5 1.9 2.9 1 1 1 2 2 2 2 Tryptophan halogenase DAO PF01266.24 AID34403.1 - 6.9e-11 42.3 10.9 1.8e-06 27.8 3.7 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 AID34403.1 - 7.7e-09 35.2 0.2 9.8e-05 21.7 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID34403.1 - 4.7e-06 26.1 0.0 6.8e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 AID34403.1 - 7.9e-06 26.0 0.2 7.9e-06 26.0 0.2 2.5 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 AID34403.1 - 8.5e-06 24.7 0.1 0.0041 15.9 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 AID34403.1 - 7.5e-05 22.1 0.0 0.24 10.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 AID34403.1 - 0.00063 18.9 1.6 0.0023 17.0 1.5 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 AID34403.1 - 0.003 17.6 2.2 0.27 11.2 0.1 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 AID34403.1 - 0.003 16.7 0.2 0.003 16.7 0.2 2.1 3 0 0 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 AID34403.1 - 0.0043 16.5 3.4 0.0088 15.4 3.4 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 AID34403.1 - 0.011 15.0 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 Thi4 family Pyr_redox PF00070.27 AID34403.1 - 0.061 13.9 0.0 0.21 12.2 0.0 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID34403.1 - 0.11 11.5 0.2 0.2 10.7 0.2 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A GMC_oxred_N PF00732.19 AID34403.1 - 0.14 11.5 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase YfhE PF14152.6 AID34404.1 - 0.09 12.9 0.2 0.13 12.4 0.2 1.2 1 0 0 1 1 1 0 YfhE-like protein Radical_SAM PF04055.21 AID34406.1 - 1.4e-12 48.3 0.0 2.4e-12 47.6 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 AID34406.1 - 0.0028 17.7 0.0 0.0067 16.5 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain Acetyltransf_1 PF00583.25 AID34407.1 - 4.4e-07 30.1 0.0 1.7e-06 28.3 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 AID34407.1 - 0.00041 20.7 0.0 0.00077 19.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 AID34407.1 - 0.0022 17.9 0.0 0.004 17.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 AID34407.1 - 0.22 11.4 0.0 0.49 10.3 0.0 1.5 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain MAP70 PF07058.11 AID34408.1 - 0.0045 15.8 0.0 0.0055 15.5 0.0 1.1 1 0 0 1 1 1 1 Microtubule-associated protein 70 Transposase_mut PF00872.18 AID34410.1 - 6.9e-14 51.5 0.0 8.4e-14 51.2 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family DDE_Tnp_IS240 PF13610.6 AID34411.1 - 5.5e-08 33.1 0.1 8.1e-08 32.6 0.1 1.2 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS240 PF13610.6 AID34414.1 - 9.1e-17 61.6 1.0 1.5e-16 60.9 1.0 1.3 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34414.1 - 9.4e-07 28.6 0.1 1.1e-06 28.4 0.1 1.0 1 0 0 1 1 1 1 Transposase IS66 family rve PF00665.26 AID34414.1 - 0.0094 16.1 1.5 0.018 15.2 0.1 2.0 3 0 0 3 3 3 1 Integrase core domain HTH_32 PF13565.6 AID34414.1 - 0.035 14.7 0.5 0.065 13.9 0.1 1.6 2 0 0 2 2 2 0 Homeodomain-like domain HTH_23 PF13384.6 AID34415.1 - 5.1e-07 29.3 3.6 1.1e-06 28.2 1.6 2.5 2 1 1 3 3 3 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 AID34415.1 - 0.00068 19.3 0.0 0.0014 18.2 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 AID34415.1 - 0.00078 19.4 1.3 0.04 13.9 0.1 3.4 2 1 1 3 3 3 1 Winged helix-turn helix Sigma70_r4 PF04545.16 AID34415.1 - 0.0011 18.4 0.1 0.0023 17.4 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 AID34415.1 - 0.0028 17.4 0.3 0.0083 15.9 0.2 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_30 PF13556.6 AID34415.1 - 0.004 16.9 0.1 0.004 16.9 0.1 1.9 3 0 0 3 3 3 1 PucR C-terminal helix-turn-helix domain Terminase_5 PF06056.12 AID34415.1 - 0.0046 16.8 0.1 0.016 15.0 0.0 2.0 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) HTH_7 PF02796.15 AID34415.1 - 0.0081 16.2 0.0 0.018 15.1 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 AID34415.1 - 0.009 16.1 1.4 0.038 14.1 0.3 2.6 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_36 PF13730.6 AID34415.1 - 0.014 15.3 0.2 0.18 11.7 0.1 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_AraC PF00165.23 AID34415.1 - 0.024 14.7 0.0 0.052 13.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_3 PF01381.22 AID34415.1 - 0.039 14.0 0.0 0.097 12.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_11 PF08279.12 AID34415.1 - 0.046 13.7 0.1 0.085 12.8 0.1 1.4 1 0 0 1 1 1 0 HTH domain HTH_Tnp_ISL3 PF13542.6 AID34415.1 - 0.096 12.1 0.9 0.31 10.5 0.1 2.3 2 1 1 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 RWP-RK PF02042.15 AID34415.1 - 0.15 12.0 0.5 0.27 11.2 0.5 1.5 1 0 0 1 1 1 0 RWP-RK domain HTH_8 PF02954.19 AID34415.1 - 0.22 11.3 2.7 0.54 10.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_Tnp_1 PF01527.20 AID34416.1 - 4.6e-07 30.0 0.2 5.8e-07 29.7 0.2 1.2 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID34416.1 - 0.00056 20.0 0.7 0.0012 19.0 0.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain DUF3546 PF12066.8 AID34416.1 - 0.04 14.1 0.1 2 8.7 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3546) HTH_23 PF13384.6 AID34416.1 - 0.041 13.7 0.1 0.087 12.6 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain DUF641 PF04859.12 AID34416.1 - 0.047 14.0 0.0 0.058 13.7 0.0 1.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) HTH_21 PF13276.6 AID34417.1 - 5e-19 68.2 1.0 6.2e-19 67.9 1.0 1.1 1 0 0 1 1 1 1 HTH-like domain HTH_Tnp_Tc3_2 PF01498.18 AID34417.1 - 0.011 16.0 0.1 0.017 15.4 0.1 1.2 1 0 0 1 1 1 0 Transposase rve PF00665.26 AID34418.1 - 1.3e-14 54.4 0.0 2.5e-14 53.5 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34418.1 - 1.7e-06 27.7 0.0 3.4e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DUF772 PF05598.11 AID34419.1 - 3.5e-21 75.0 0.1 1.6e-20 72.9 0.0 2.0 2 0 0 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 AID34419.1 - 1.6e-06 27.9 0.1 5.9e-06 26.1 0.1 1.9 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 AID34419.1 - 0.00091 19.5 0.0 0.0016 18.7 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain UNC119_bdg PF15435.6 AID34419.1 - 0.03 13.9 0.0 0.36 10.4 0.0 2.5 2 1 1 3 3 3 0 UNC119-binding protein C5orf30 homologue FliH PF02108.16 AID34419.1 - 0.16 12.0 0.0 1.5 8.9 0.0 2.2 2 0 0 2 2 2 0 Flagellar assembly protein FliH Abhydrolase_1 PF00561.20 AID34421.1 - 8.7e-11 42.0 0.1 1e-10 41.7 0.1 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 AID34421.1 - 1.3e-06 29.2 0.2 1.4e-06 29.1 0.2 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_M35 PF02102.15 AID34421.1 - 0.039 12.8 0.2 0.045 12.6 0.2 1.0 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family MFS_4 PF06779.14 AID34422.1 - 1.3e-83 281.4 40.8 1.5e-83 281.1 40.8 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 AID34422.1 - 1.9e-16 60.0 66.5 6.6e-10 38.4 38.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily ATP19 PF11022.8 AID34422.1 - 1.6 9.1 5.4 35 4.9 0.3 3.5 3 1 0 3 3 3 0 ATP synthase subunit K LysR_substrate PF03466.20 AID34423.1 - 4.2e-28 98.1 0.3 5.6e-28 97.8 0.3 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID34423.1 - 4.6e-18 64.9 0.8 8.8e-18 64.0 0.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family NMO PF03060.15 AID34424.1 - 1.1e-22 80.9 0.0 1.2e-22 80.7 0.0 1.0 1 0 0 1 1 1 1 Nitronate monooxygenase DUF1685 PF07939.11 AID34424.1 - 0.05 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) rve PF00665.26 AID34425.1 - 1.7e-10 41.1 0.1 4.8e-10 39.7 0.1 1.7 1 1 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34425.1 - 0.00022 20.9 0.1 0.00039 20.1 0.1 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_Tnp_1 PF01527.20 AID34426.1 - 1.8e-15 57.0 0.0 2.1e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID34426.1 - 1.6e-05 25.0 0.0 2.6e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 AID34426.1 - 2.9e-05 24.0 0.1 3.5e-05 23.7 0.1 1.4 1 1 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 AID34426.1 - 7.1e-05 22.5 0.0 0.00014 21.5 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 AID34426.1 - 0.027 14.3 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_IS630 PF01710.16 AID34426.1 - 0.089 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Transposase TetR_N PF00440.23 AID34426.1 - 0.14 12.0 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_Tnp_ISL3 PF13542.6 AID34426.1 - 0.15 11.5 0.0 0.32 10.4 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 rve PF00665.26 AID34427.1 - 0.0026 17.9 0.0 0.0042 17.3 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 AID34428.1 - 1.4e-10 41.1 9.3 1.4e-10 41.1 9.3 1.6 2 0 0 2 2 2 1 HTH-like domain rve PF00665.26 AID34428.1 - 0.0039 17.4 0.0 0.008 16.4 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_23 PF13384.6 AID34428.1 - 0.0042 16.9 1.9 0.024 14.5 0.0 2.7 1 1 1 2 2 2 1 Homeodomain-like domain SPAM PF02090.15 AID34428.1 - 0.086 12.6 3.6 0.12 12.2 3.6 1.2 1 0 0 1 1 1 0 Salmonella surface presentation of antigen gene type M protein HTH_32 PF13565.6 AID34428.1 - 0.17 12.5 6.2 0.82 10.3 0.3 2.5 1 1 1 2 2 2 0 Homeodomain-like domain HTH_29 PF13551.6 AID34428.1 - 0.33 11.0 6.2 2.6 8.1 0.2 2.5 2 0 0 2 2 2 0 Winged helix-turn helix rve_3 PF13683.6 AID34429.1 - 1.6e-23 82.2 0.0 2.4e-23 81.7 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 AID34429.1 - 7.3e-16 58.4 0.0 9.1e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 AID34429.1 - 0.0031 17.8 0.0 0.0036 17.5 0.0 1.1 1 0 0 1 1 1 1 DDE domain rve_2 PF13333.6 AID34429.1 - 0.064 13.4 0.0 0.22 11.7 0.0 1.8 2 0 0 2 2 2 0 Integrase core domain GARS_N PF02844.15 AID34429.1 - 0.15 12.8 0.0 0.17 12.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain Resolvase PF00239.21 AID34431.1 - 2.9e-19 69.6 1.9 4.4e-19 69.0 1.9 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain Recombinase PF07508.13 AID34431.1 - 2.1e-12 47.3 0.0 3.5e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 Recombinase Zn_ribbon_recom PF13408.6 AID34431.1 - 2.2e-06 28.1 0.9 5.4e-06 26.8 0.9 1.7 1 0 0 1 1 1 1 Recombinase zinc beta ribbon domain DUF1451 PF07295.11 AID34431.1 - 0.2 11.7 0.0 0.47 10.5 0.0 1.6 1 0 0 1 1 1 0 Zinc-ribbon containing domain Gas_vesicle PF00741.18 AID34433.1 - 0.01 15.9 0.0 5.2 7.3 0.0 2.3 2 0 0 2 2 2 0 Gas vesicle protein UBA_3 PF09288.10 AID34435.1 - 0.18 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain SIS PF01380.22 AID34437.1 - 1.3e-62 209.5 0.4 3.6e-34 117.4 0.1 2.3 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 AID34437.1 - 0.01 15.9 0.0 0.059 13.4 0.0 2.2 2 0 0 2 2 2 0 SIS domain GATase_7 PF13537.6 AID34437.1 - 0.021 14.7 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 Glutamine amidotransferase domain HTH_31 PF13560.6 AID34438.1 - 0.023 15.0 0.7 0.047 14.0 0.7 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Read-through PF16814.5 AID34439.1 - 0.091 12.5 0.0 0.094 12.5 0.0 1.0 1 0 0 1 1 1 0 Read-through domain HTH_3 PF01381.22 AID34441.1 - 4.7e-07 29.8 0.0 7.5e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 AID34441.1 - 6.9e-06 26.0 0.0 9.1e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 AID34441.1 - 1.3e-05 25.5 0.0 1.7e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 AID34441.1 - 0.00045 20.0 0.0 0.0053 16.6 0.1 2.4 2 1 1 3 3 3 1 Helix-turn-helix domain DUF2802 PF10975.8 AID34441.1 - 0.0052 16.9 0.2 0.0083 16.2 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2802) DDE_Tnp_IS240 PF13610.6 AID34444.1 - 1.6e-11 44.6 1.2 4.8e-11 43.1 0.5 1.8 1 1 1 2 2 2 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34444.1 - 2.4e-06 27.2 0.1 2.9e-06 27.0 0.1 1.0 1 0 0 1 1 1 1 Transposase IS66 family rve PF00665.26 AID34444.1 - 0.01 16.0 0.5 0.044 14.0 0.1 2.0 2 0 0 2 2 2 0 Integrase core domain PPK2 PF03976.14 AID34444.1 - 0.081 12.4 0.2 0.096 12.2 0.2 1.1 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) HTH_32 PF13565.6 AID34444.1 - 0.084 13.5 0.1 0.19 12.4 0.0 1.6 2 0 0 2 2 2 0 Homeodomain-like domain DDE_Tnp_IS240 PF13610.6 AID34445.1 - 4e-07 30.3 0.0 4.1e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34448.1 - 0.00043 19.8 0.0 0.00047 19.7 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family HTH_32 PF13565.6 AID34448.1 - 0.031 14.9 0.1 0.039 14.6 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain DUF772 PF05598.11 AID34448.1 - 0.065 13.3 0.3 0.19 11.8 0.1 1.7 1 1 1 2 2 2 0 Transposase domain (DUF772) Peptidase_C70 PF12385.8 AID34449.1 - 1.9e-20 73.3 0.0 2.8e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 Peptidase_C39_2 PF13529.6 AID34449.1 - 0.021 15.4 0.1 2.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Peptidase_C39 like family Gln_amidase PF15644.6 AID34449.1 - 0.039 15.0 0.2 0.18 12.8 0.0 2.1 2 1 0 2 2 2 0 Papain fold toxin 1, glutamine deamidase DDE_Tnp_IS240 PF13610.6 AID34450.1 - 2.1e-14 53.9 0.0 2.8e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 DDE domain CSD PF00313.22 AID34450.1 - 1.5e-08 34.4 1.4 3.2e-08 33.3 0.2 2.0 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID34450.1 - 0.089 12.5 2.2 0.17 11.6 0.2 2.1 2 0 0 2 2 2 0 Ribonuclease B OB domain RP-C_C PF11800.8 AID34452.1 - 6.6e-16 59.0 0.0 9.4e-16 58.5 0.0 1.2 1 0 0 1 1 1 1 Replication protein C C-terminal region AWS PF17907.1 AID34453.1 - 0.011 15.7 0.7 0.019 15.0 0.7 1.3 1 0 0 1 1 1 0 AWS domain Stc1 PF12898.7 AID34454.1 - 0.043 14.3 0.2 0.054 14.1 0.2 1.1 1 0 0 1 1 1 0 Stc1 domain Carla_C4 PF01623.17 AID34454.1 - 0.2 11.6 2.5 0.25 11.3 2.5 1.3 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein F420_oxidored PF03807.17 AID34455.1 - 4.2e-19 68.9 3.3 1.1e-18 67.6 3.3 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 AID34455.1 - 2.4e-07 31.1 6.0 5.2e-07 30.0 6.0 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 AID34455.1 - 9.9e-06 25.2 0.3 1.6e-05 24.5 0.3 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 AID34455.1 - 2e-05 24.7 0.1 3.8e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 AID34455.1 - 0.00045 19.6 0.3 0.00069 19.0 0.3 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PDH PF02153.17 AID34455.1 - 0.00065 18.8 0.1 0.0011 18.0 0.1 1.4 1 0 0 1 1 1 1 Prephenate dehydrogenase Semialdhyde_dh PF01118.24 AID34455.1 - 0.0011 19.3 2.2 0.0016 18.9 1.8 1.6 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 AID34455.1 - 0.082 12.8 3.1 0.092 12.6 1.4 1.9 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 AID34455.1 - 0.2 11.6 5.8 16 5.4 5.5 2.7 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Rossmann-like PF10727.9 AID34455.1 - 0.79 9.6 10.5 0.048 13.5 4.9 1.9 2 1 0 2 2 2 0 Rossmann-like domain CoA_binding PF02629.19 AID34455.1 - 0.88 10.3 4.7 0.48 11.1 1.8 2.0 2 0 0 2 2 2 0 CoA binding domain EspB_PE PF18625.1 AID34459.1 - 0.074 13.5 0.1 0.15 12.6 0.0 1.5 1 1 0 1 1 1 0 ESX-1 secreted protein B PE domain Transposase_20 PF02371.16 AID34460.1 - 2.8e-27 94.9 0.4 9.8e-27 93.1 0.4 2.0 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family HHH PF00633.23 AID34460.1 - 0.012 15.4 0.2 0.026 14.4 0.2 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 AID34460.1 - 0.054 14.1 0.0 0.1 13.2 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_3 PF12836.7 AID34460.1 - 0.13 12.5 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif Perilipin PF03036.16 AID34462.1 - 0.034 13.2 0.0 0.053 12.5 0.0 1.2 1 0 0 1 1 1 0 Perilipin family DNA_photolyase PF00875.18 AID34462.1 - 0.036 14.1 0.0 7.3 6.6 0.0 2.2 2 0 0 2 2 2 0 DNA photolyase DDE_Tnp_IS240 PF13610.6 AID34463.1 - 0.00051 20.3 0.0 0.00063 20.0 0.0 1.1 1 0 0 1 1 1 1 DDE domain DDE_Tnp_1_2 PF13586.6 AID34465.1 - 2.2e-08 34.3 0.5 2.3e-08 34.3 0.5 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 AID34465.1 - 1.2e-05 25.1 1.4 1.2e-05 25.1 1.4 1.0 1 0 0 1 1 1 1 Transposase DDE domain Asn_synthase PF00733.21 AID34467.1 - 1.8e-47 162.7 0.3 3.1e-47 161.9 0.3 1.4 1 1 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 AID34467.1 - 4.5e-08 33.0 0.0 9.2e-08 32.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 AID34467.1 - 0.0009 19.4 0.0 0.0035 17.6 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase domain Chlorosome_CsmC PF11098.8 AID34467.1 - 0.067 13.2 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Chlorosome envelope protein C QueC PF06508.13 AID34467.1 - 0.14 11.6 0.0 0.29 10.6 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC EamA PF00892.20 AID34468.1 - 3.4e-10 40.2 23.8 6.2e-07 29.7 12.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF4392 PF14336.6 AID34469.1 - 3.4e-35 121.9 0.0 4.2e-35 121.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4392) GHMP_kinases_N PF00288.26 AID34470.1 - 1.9e-12 47.2 0.1 3.7e-12 46.3 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 AID34470.1 - 0.0017 18.7 0.0 0.0035 17.7 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal NTP_transf_3 PF12804.7 AID34471.1 - 5.3e-14 52.9 0.0 1.2e-13 51.7 0.0 1.5 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 AID34471.1 - 6.2e-09 35.8 0.0 8.7e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 AID34471.1 - 9.8e-05 22.2 0.3 0.00049 19.9 0.0 2.2 3 0 0 3 3 3 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDP-OH_P_transf PF01066.21 AID34472.1 - 1.9e-10 41.3 0.3 1.9e-10 41.3 0.3 2.8 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF3464 PF11947.8 AID34472.1 - 0.38 10.5 1.0 1.1 9.1 0.4 2.0 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 EamA PF00892.20 AID34473.1 - 2.2e-08 34.3 2.0 2.6e-08 34.1 2.0 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF333 PF03891.15 AID34474.1 - 4.8e-22 77.9 0.1 6.1e-22 77.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF333) Resolvase PF00239.21 AID34476.1 - 2.9e-27 95.6 0.2 3.3e-27 95.4 0.2 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain Redoxin PF08534.10 AID34478.1 - 4.2e-27 94.7 0.0 5.3e-27 94.3 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 AID34478.1 - 5.5e-13 48.9 0.0 7.1e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Sigma54_AID PF00309.20 AID34479.1 - 2e-15 56.3 9.2 3e-15 55.8 9.2 1.3 1 0 0 1 1 1 1 Sigma-54 factor, Activator interacting domain (AID) Sigma54_DBD PF04552.13 AID34480.1 - 3.2e-70 234.9 0.6 4.8e-70 234.4 0.6 1.2 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 AID34480.1 - 1.7e-36 125.7 0.0 5.3e-36 124.1 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain HTH_IclR PF09339.10 AID34480.1 - 0.0039 16.9 0.0 2.5 8.0 0.0 2.7 2 0 0 2 2 2 2 IclR helix-turn-helix domain Arg_repressor PF01316.21 AID34480.1 - 0.012 15.4 0.0 0.035 13.9 0.0 1.8 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HTH_23 PF13384.6 AID34480.1 - 0.013 15.3 0.1 8.1 6.4 0.0 3.8 4 0 0 4 4 4 0 Homeodomain-like domain Peptidase_S41_N PF11918.8 AID34480.1 - 0.014 15.6 0.5 2.9 8.2 0.0 2.6 2 0 0 2 2 2 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Sigma70_r3 PF04539.16 AID34480.1 - 0.08 13.0 0.1 0.82 9.8 0.0 2.6 2 1 0 2 2 2 0 Sigma-70 region 3 HTH_12 PF08461.10 AID34480.1 - 0.087 12.8 0.8 7.5 6.6 0.2 2.6 1 1 1 2 2 2 0 Ribonuclease R winged-helix domain Nif11 PF07862.11 AID34481.1 - 8.1e-09 35.7 0.0 2e-08 34.4 0.0 1.7 1 0 0 1 1 1 1 Nif11 domain L_biotic_typeA PF04604.13 AID34481.1 - 0.061 13.2 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Type-A lantibiotic Dehydratase_SU PF02287.15 AID34481.1 - 0.076 13.1 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 Dehydratase small subunit DDE_Tnp_IS240 PF13610.6 AID34483.1 - 0.0063 16.7 0.0 0.007 16.6 0.0 1.1 1 0 0 1 1 1 1 DDE domain SnoaL_2 PF12680.7 AID34484.1 - 1.7e-11 44.7 0.0 2.3e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 AID34484.1 - 8.6e-08 32.0 0.2 2.6e-06 27.2 0.2 2.1 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase Sigma70_r4_2 PF08281.12 AID34486.1 - 0.00011 21.8 0.5 0.00016 21.2 0.5 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 AID34486.1 - 0.0085 15.6 1.2 0.014 14.9 1.2 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 AID34486.1 - 0.0091 15.7 1.6 0.033 14.0 0.2 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 AID34486.1 - 0.011 15.7 0.0 0.022 14.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Uma2 PF05685.12 AID34486.1 - 0.097 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Putative restriction endonuclease GntR PF00392.21 AID34486.1 - 0.11 12.2 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 AID34486.1 - 0.12 12.6 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FCD PF07729.12 AID34489.1 - 1e-14 55.0 2.9 1e-14 55.0 2.9 1.8 1 1 1 2 2 2 1 FCD domain DUF742 PF05331.11 AID34489.1 - 0.031 14.1 0.1 0.046 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF742) DDE_Tnp_IS240 PF13610.6 AID34493.1 - 0.00028 21.1 0.0 0.0003 21.0 0.0 1.1 1 0 0 1 1 1 1 DDE domain T6SS_VasE PF05936.12 AID34496.1 - 5e-146 486.7 0.0 5.6e-146 486.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FHA PF00498.26 AID34497.1 - 0.00011 22.5 0.0 0.00021 21.6 0.0 1.5 1 0 0 1 1 1 1 FHA domain DotU PF09850.9 AID34498.1 - 7.8e-61 205.4 0.1 1.1e-60 204.9 0.1 1.2 1 0 0 1 1 1 1 Type VI secretion system protein DotU OmpA PF00691.20 AID34498.1 - 4.9e-11 42.9 0.0 8e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 OmpA family RskA PF10099.9 AID34498.1 - 0.12 12.6 7.0 1 9.7 3.3 2.3 2 0 0 2 2 2 0 Anti-sigma-K factor rskA ImcF-related_N PF14331.6 AID34499.1 - 1.2e-83 280.5 0.6 2.3e-83 279.5 0.6 1.5 1 0 0 1 1 1 1 ImcF-related N-terminal domain IcmF-related PF06761.12 AID34499.1 - 2.3e-68 231.0 1.5 4.6e-68 230.0 1.5 1.5 1 0 0 1 1 1 1 Intracellular multiplication and human macrophage-killing MMR_HSR1 PF01926.23 AID34499.1 - 0.029 14.5 0.0 0.15 12.1 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 AID34499.1 - 0.054 13.8 0.0 0.23 11.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain IcmF_C PF06744.12 AID34500.1 - 3.7e-50 170.4 0.1 4.5e-50 170.1 0.1 1.1 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal DDE_Tnp_IS240 PF13610.6 AID34504.1 - 2.1e-43 147.9 0.1 3e-43 147.4 0.1 1.2 1 0 0 1 1 1 1 DDE domain rve PF00665.26 AID34504.1 - 1.4e-07 31.7 1.1 3.7e-07 30.4 0.5 2.0 2 0 0 2 2 2 1 Integrase core domain DDE_Tnp_IS66 PF03050.14 AID34504.1 - 3e-07 30.2 1.2 2.1e-06 27.4 0.1 2.0 2 0 0 2 2 2 1 Transposase IS66 family HTH_32 PF13565.6 AID34504.1 - 0.17 12.5 0.1 0.17 12.5 0.1 2.6 2 1 0 2 2 2 0 Homeodomain-like domain DEDD_Tnp_IS110 PF01548.17 AID34505.1 - 4.5e-13 49.3 0.0 5.6e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Transposase Glyco_transf_4 PF13439.6 AID34505.1 - 0.0021 18.1 0.0 0.0028 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 AID34505.1 - 0.029 14.8 0.2 0.044 14.2 0.2 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 AID34505.1 - 0.064 12.9 0.1 0.08 12.6 0.1 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain LysR_substrate PF03466.20 AID34506.1 - 5.2e-20 71.7 5.1 9.4e-20 70.9 5.1 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID34506.1 - 1.8e-13 50.2 0.2 4.3e-13 49.0 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HATPase_c PF02518.26 AID34507.1 - 1.4e-14 54.5 0.0 3.5e-14 53.2 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HopW1-1 PF15457.6 AID34507.1 - 0.0004 19.8 0.7 0.32 10.2 0.1 2.1 2 0 0 2 2 2 2 Type III T3SS secreted effector HopW1-1/HopPmaA HATPase_c_2 PF13581.6 AID34507.1 - 0.11 12.5 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF4096 PF13340.6 AID34508.1 - 5.1e-18 65.1 0.0 6.5e-18 64.7 0.0 1.2 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) Sigma70_r4_2 PF08281.12 AID34510.1 - 3.6e-05 23.3 0.1 8.8e-05 22.1 0.2 1.7 2 1 0 2 2 2 1 Sigma-70, region 4 GerE PF00196.19 AID34510.1 - 0.0087 15.6 0.3 0.14 11.8 0.1 2.6 2 1 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_26 PF13443.6 AID34510.1 - 0.07 13.6 0.2 0.1 13.1 0.2 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_6 PF01418.17 AID34510.1 - 0.1 12.6 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family VipB PF05943.12 AID34511.1 - 1.6e-41 142.5 0.0 2e-41 142.2 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath IMS PF00817.20 AID34511.1 - 0.042 13.8 0.0 0.044 13.8 0.0 1.2 1 0 0 1 1 1 0 impB/mucB/samB family ImpA_N PF06812.12 AID34512.1 - 6.9e-30 103.6 0.0 1.4e-29 102.7 0.0 1.5 1 0 0 1 1 1 1 ImpA, N-terminal, type VI secretion system T6SS_VipA PF05591.12 AID34513.1 - 3.2e-52 176.4 0.0 3.7e-52 176.2 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 VipB PF05943.12 AID34514.1 - 5.6e-182 605.2 0.0 6.5e-182 605.0 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath Ste5_C PF12194.8 AID34514.1 - 0.054 13.4 0.1 0.089 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein kinase Fus3-binding T6SS_HCP PF05638.12 AID34516.1 - 9.6e-16 58.4 0.0 1.2e-15 58.0 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp GPW_gp25 PF04965.14 AID34517.1 - 3.7e-16 58.7 0.0 5.5e-16 58.1 0.0 1.3 1 0 0 1 1 1 1 Gene 25-like lysozyme T6SS_TssF PF05947.12 AID34518.1 - 1.8e-213 710.5 0.0 2e-213 710.3 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssF T6SS_TssG PF06996.11 AID34519.1 - 1.8e-95 319.6 0.1 2.1e-95 319.4 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion, TssG Phage_GPD PF05954.11 AID34521.1 - 4.4e-73 246.2 0.0 9.2e-73 245.2 0.0 1.5 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) PAAR_motif PF05488.13 AID34522.1 - 0.014 15.6 0.5 0.022 14.9 0.2 1.6 1 1 1 2 2 2 0 PAAR motif LodA_N PF17990.1 AID34525.1 - 1.2e-59 201.9 0.0 1.5e-59 201.6 0.0 1.1 1 0 0 1 1 1 1 L-Lysine epsilon oxidase N-terminal Tyrosinase PF00264.20 AID34526.1 - 2.4e-13 50.9 1.4 3.2e-13 50.5 1.4 1.2 1 0 0 1 1 1 1 Common central domain of tyrosinase PPO1_DWL PF12142.8 AID34526.1 - 0.031 14.1 0.0 0.064 13.0 0.0 1.5 1 0 0 1 1 1 0 Polyphenol oxidase middle domain Tyrosinase PF00264.20 AID34527.1 - 2e-19 70.8 0.4 2.9e-19 70.2 0.4 1.2 1 0 0 1 1 1 1 Common central domain of tyrosinase Cu-oxidase_2 PF07731.14 AID34528.1 - 7.1e-14 51.7 0.3 7.1e-14 51.7 0.3 3.2 3 2 0 3 3 3 1 Multicopper oxidase Cu-oxidase_3 PF07732.15 AID34528.1 - 8.3e-13 48.4 0.9 1.5e-09 37.9 0.8 2.6 2 0 0 2 2 2 2 Multicopper oxidase Nif11 PF07862.11 AID34531.1 - 1.9e-05 24.9 0.0 4.6e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 Nif11 domain Radical_SAM PF04055.21 AID34532.1 - 0.0019 18.6 0.0 0.0039 17.6 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily YpM PF09144.10 AID34534.1 - 0.22 11.7 0.0 0.32 11.2 0.0 1.2 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen WXG100 PF06013.12 AID34535.1 - 0.045 14.0 0.4 0.25 11.6 0.1 1.9 1 1 1 2 2 2 0 Proteins of 100 residues with WXG tRNA-synt_1f PF01921.18 AID34538.1 - 0.017 14.0 0.0 0.02 13.8 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (K) DUF3151 PF11349.8 AID34540.1 - 0.0083 16.2 0.1 0.0092 16.1 0.1 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3151) DUF3151 PF11349.8 AID34542.1 - 0.071 13.2 0.1 0.073 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3151) UPF0236 PF06782.11 AID34543.1 - 0.0063 15.2 0.1 0.0069 15.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0236) Protamine_P2 PF00841.19 AID34543.1 - 0.069 13.6 0.1 0.14 12.7 0.1 1.5 1 0 0 1 1 1 0 Sperm histone P2 AAA_23 PF13476.6 AID34545.1 - 9.2e-13 49.1 0.0 1.1e-12 49.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID34545.1 - 8.8e-09 35.1 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34545.1 - 3.6e-07 29.8 0.0 5.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID34545.1 - 2.9e-06 27.2 0.0 2.9e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain DUF2813 PF11398.8 AID34545.1 - 0.00013 21.4 0.0 0.00017 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) RsgA_GTPase PF03193.16 AID34545.1 - 0.022 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 AID34545.1 - 0.036 13.9 0.1 0.049 13.4 0.1 1.3 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 AID34545.1 - 0.087 13.3 0.1 0.094 13.2 0.1 1.3 1 1 0 1 1 1 0 ABC transporter IstB_IS21 PF01695.17 AID34545.1 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein FA_hydroxylase PF04116.13 AID34547.1 - 3.8e-24 85.5 17.8 3.8e-24 85.5 17.8 1.9 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily DUF389 PF04087.14 AID34547.1 - 0.0084 16.1 0.2 0.021 14.8 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF389) Acyl-CoA_dh_N PF02771.16 AID34550.1 - 0.071 13.8 0.0 0.13 12.9 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain NadA PF02445.16 AID34551.1 - 1.2e-111 372.7 0.6 1.3e-111 372.5 0.6 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein QRPTase_C PF01729.19 AID34552.1 - 1.9e-59 200.2 1.8 2.6e-59 199.8 1.8 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 AID34552.1 - 6.2e-27 93.5 0.1 1.5e-26 92.2 0.1 1.7 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain BATS PF06968.13 AID34554.1 - 4.5e-19 68.4 0.1 1.2e-18 67.0 0.1 1.8 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 AID34554.1 - 2.5e-14 54.0 0.1 6.4e-14 52.7 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Nop PF01798.18 AID34554.1 - 0.12 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin Aminotran_1_2 PF00155.21 AID34555.1 - 1.9e-44 152.3 0.0 2.2e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 AID34555.1 - 2.3e-05 23.9 0.1 5.7e-05 22.6 0.1 1.5 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 AID34555.1 - 4e-05 22.3 0.0 5.9e-05 21.8 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 AID34555.1 - 7.4e-05 22.2 0.1 0.00014 21.2 0.1 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.20 AID34555.1 - 0.11 11.2 0.0 0.37 9.5 0.0 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain AAA_26 PF13500.6 AID34556.1 - 3.5e-48 164.1 0.0 4e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 AID34556.1 - 0.012 15.6 0.7 0.018 15.1 0.7 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Aminotran_3 PF00202.21 AID34557.1 - 1.6e-15 56.7 0.0 2.1e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_3 PF00202.21 AID34558.1 - 3.3e-24 85.3 0.1 3.5e-24 85.2 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III ACP_syn_III_C PF08541.10 AID34559.1 - 3.9e-28 97.4 0.1 7.7e-28 96.5 0.1 1.5 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 AID34559.1 - 3.3e-20 71.7 0.1 6.8e-20 70.7 0.1 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aminotran_3 PF00202.21 AID34559.1 - 4.9e-07 28.7 0.0 7.3e-07 28.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III Zn_Tnp_IS1595 PF12760.7 AID34560.1 - 8.2e-14 51.3 1.4 1.3e-13 50.6 1.4 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 AID34560.1 - 0.0014 18.7 0.6 1.7 8.9 0.1 2.4 2 0 0 2 2 2 2 Zinc ribbon domain zinc_ribbon_2 PF13240.6 AID34560.1 - 0.011 15.4 4.6 0.024 14.4 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 AID34560.1 - 0.04 13.8 1.7 0.04 13.8 1.7 1.9 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-tcix PF14952.6 AID34560.1 - 0.15 11.7 4.3 2 8.1 0.5 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DZR PF12773.7 AID34560.1 - 0.2 11.7 2.1 0.51 10.4 2.1 1.6 1 1 0 1 1 1 0 Double zinc ribbon NOB1_Zn_bind PF08772.11 AID34560.1 - 0.21 11.8 1.1 0.59 10.3 1.1 1.7 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 AID34560.1 - 1 8.9 4.2 0.88 9.1 0.8 2.1 2 0 0 2 2 2 0 zinc-ribbon domain IstB_IS21 PF01695.17 AID34561.1 - 1.5e-18 67.2 0.4 1.8e-18 66.9 0.4 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein IstB_IS21 PF01695.17 AID34562.1 - 4.5e-16 59.1 0.0 6.3e-16 58.6 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein PhoH PF02562.16 AID34562.1 - 5.6e-05 22.7 0.0 0.00011 21.7 0.0 1.5 2 0 0 2 2 2 1 PhoH-like protein AAA_19 PF13245.6 AID34562.1 - 0.001 19.4 0.1 0.0018 18.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 AID34562.1 - 0.0055 17.0 0.6 0.0087 16.3 0.1 1.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 AID34562.1 - 0.0088 16.5 0.1 0.016 15.6 0.1 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 AID34562.1 - 0.009 16.4 0.1 0.017 15.5 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 AID34562.1 - 0.019 14.7 0.1 0.033 13.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 AID34562.1 - 0.027 14.6 0.1 0.057 13.5 0.0 1.6 2 0 0 2 2 1 0 Sigma-54 interaction domain DUF815 PF05673.13 AID34562.1 - 0.048 12.8 0.0 0.062 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 AID34562.1 - 0.049 13.1 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 AID34562.1 - 0.054 12.9 0.0 0.086 12.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 AID34562.1 - 0.062 12.6 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin PPP1R35_C PF15503.6 AID34562.1 - 0.068 13.0 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus AAA_24 PF13479.6 AID34562.1 - 0.073 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID34562.1 - 0.078 13.3 0.1 0.14 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 AID34562.1 - 0.091 12.8 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 AID34562.1 - 0.094 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain FtsK_SpoIIIE PF01580.18 AID34562.1 - 0.12 11.7 0.0 0.19 11.1 0.0 1.4 1 1 0 1 1 1 0 FtsK/SpoIIIE family Bac_DnaA PF00308.18 AID34562.1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_11 PF13086.6 AID34562.1 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain rve PF00665.26 AID34563.1 - 2.8e-17 63.0 0.2 8.4e-17 61.5 0.1 1.9 2 0 0 2 2 1 1 Integrase core domain HTH_23 PF13384.6 AID34563.1 - 2.6e-05 23.8 2.8 6.9e-05 22.5 0.7 2.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 AID34563.1 - 3.5e-05 23.7 0.6 0.00011 22.1 0.0 2.1 2 0 0 2 2 1 1 Winged helix-turn helix HTH_7 PF02796.15 AID34563.1 - 4.6e-05 23.4 0.0 0.00013 22.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 AID34563.1 - 9.6e-05 22.1 1.6 0.00031 20.4 1.6 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 AID34563.1 - 0.00028 20.4 0.2 0.00086 18.8 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 AID34563.1 - 0.00041 20.0 0.0 0.00094 18.8 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_28 PF13518.6 AID34563.1 - 0.00061 19.9 0.5 0.00061 19.9 0.5 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 AID34563.1 - 0.00075 19.3 0.8 0.0048 16.7 0.1 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_3 PF01381.22 AID34563.1 - 0.0011 19.0 0.0 0.0032 17.5 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID34563.1 - 0.0014 18.9 1.4 0.0071 16.7 1.4 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 AID34563.1 - 0.0032 17.2 0.2 0.0095 15.7 0.2 1.9 1 0 0 1 1 1 1 MerR family regulatory protein NUMOD1 PF07453.13 AID34563.1 - 0.0068 16.6 0.1 0.013 15.8 0.1 1.5 1 0 0 1 1 1 1 NUMOD1 domain HTH_36 PF13730.6 AID34563.1 - 0.0093 15.9 0.0 0.024 14.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_NinH PF06322.11 AID34563.1 - 0.011 15.6 0.1 0.029 14.2 0.1 1.7 1 0 0 1 1 1 0 Phage NinH protein HTH_40 PF14493.6 AID34563.1 - 0.016 15.6 0.0 0.049 14.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID34563.1 - 0.017 15.1 0.6 0.035 14.0 0.2 1.8 2 0 0 2 2 1 0 HTH domain HTH_Tnp_Tc3_1 PF11427.8 AID34563.1 - 0.022 14.6 0.4 0.055 13.3 0.4 1.6 1 0 0 1 1 1 0 Tc3 transposase HTH_17 PF12728.7 AID34563.1 - 0.022 14.9 1.4 0.088 13.0 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain TnsD PF15978.5 AID34563.1 - 0.027 13.5 0.1 0.043 12.8 0.1 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_30 PF13556.6 AID34563.1 - 0.03 14.1 1.4 0.093 12.6 0.2 2.4 3 0 0 3 3 2 0 PucR C-terminal helix-turn-helix domain HTH_AsnC-type PF13404.6 AID34563.1 - 0.036 13.9 0.0 0.12 12.2 0.0 1.9 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 AID34563.1 - 0.049 13.2 0.2 0.16 11.5 0.2 2.0 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_19 PF12844.7 AID34563.1 - 0.055 13.5 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 AID34563.1 - 0.062 13.7 0.0 4.7 7.7 0.0 2.5 2 0 0 2 2 2 0 FaeA-like protein MerR_1 PF13411.6 AID34563.1 - 0.077 13.1 0.0 0.22 11.7 0.0 1.8 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_Tnp_1 PF01527.20 AID34563.1 - 0.14 12.5 0.2 0.14 12.5 0.2 2.5 3 0 0 3 3 1 0 Transposase GntR PF00392.21 AID34566.1 - 5.2e-17 61.3 0.2 9.9e-17 60.4 0.1 1.5 1 1 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 AID34566.1 - 0.00044 20.1 0.0 0.00069 19.5 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_50 PF18024.1 AID34566.1 - 0.0013 18.3 0.0 0.0021 17.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 AID34566.1 - 0.0074 16.1 0.1 0.017 15.0 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 AID34566.1 - 0.011 15.3 0.1 0.024 14.2 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 AID34566.1 - 0.019 14.9 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 HTH domain GP3_package PF16677.5 AID34566.1 - 0.023 14.8 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 DNA-packaging protein gp3 MarR_2 PF12802.7 AID34566.1 - 0.033 14.1 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 AID34566.1 - 0.034 14.1 0.1 0.047 13.7 0.1 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_41 PF14502.6 AID34566.1 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Aminotran_1_2 PF00155.21 AID34567.1 - 2.2e-17 63.3 0.0 3.3e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II TetR_C_11 PF16859.5 AID34567.1 - 0.029 14.7 1.0 0.078 13.3 1.0 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Fer2 PF00111.27 AID34568.1 - 3.1e-08 33.4 0.4 5.3e-08 32.7 0.4 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_6 PF08030.12 AID34568.1 - 9.4e-05 22.6 0.0 0.11 12.6 0.3 2.2 1 1 1 2 2 2 2 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 AID34568.1 - 0.00057 20.5 0.1 0.023 15.4 0.1 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 AID34568.1 - 0.048 14.0 0.0 0.071 13.5 0.0 1.3 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain Fer2_4 PF13510.6 AID34568.1 - 0.15 12.1 0.1 0.39 10.8 0.1 1.7 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain AsnC_trans_reg PF01037.21 AID34571.1 - 2.2e-15 56.4 0.0 4.6e-15 55.3 0.0 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain APH PF01636.23 AID34571.1 - 2.7e-09 37.3 0.0 4.9e-09 36.5 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family NapD PF03927.13 AID34571.1 - 0.0058 16.7 0.0 0.035 14.1 0.0 2.3 2 0 0 2 2 2 1 NapD protein Lyase_1 PF00206.20 AID34572.1 - 2.8e-86 289.7 0.0 3.5e-86 289.4 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 AID34572.1 - 9.4e-12 45.2 0.1 2.4e-11 43.9 0.1 1.7 1 0 0 1 1 1 1 Fumarase C C-terminus DHDPS PF00701.22 AID34573.1 - 3.3e-92 308.3 0.0 3.6e-92 308.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family PA PF02225.22 AID34573.1 - 0.0065 16.5 0.1 0.016 15.2 0.1 1.7 1 0 0 1 1 1 1 PA domain Amidohydro_2 PF04909.14 AID34573.1 - 0.026 14.3 0.0 0.046 13.5 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase Aldedh PF00171.22 AID34574.1 - 4.6e-145 483.7 0.1 5.5e-145 483.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Homoserine_dh PF00742.19 AID34575.1 - 1.7e-57 194.1 0.1 1.1e-55 188.2 0.0 2.2 2 0 0 2 2 2 2 Homoserine dehydrogenase NAD_binding_3 PF03447.16 AID34575.1 - 1.2e-07 32.4 0.2 4.8e-07 30.5 0.2 2.0 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain TPR_14 PF13428.6 AID34575.1 - 0.11 13.3 0.0 11 7.1 0.0 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat Multi_Drug_Res PF00893.19 AID34576.1 - 5.9e-26 91.0 6.5 6e-26 91.0 6.1 1.2 1 1 0 1 1 1 1 Small Multidrug Resistance protein Cys_Met_Meta_PP PF01053.20 AID34577.1 - 7.5e-98 327.6 0.0 1e-97 327.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 AID34577.1 - 7.7e-09 35.0 0.0 1e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 AID34577.1 - 8.9e-09 35.0 0.0 1.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.11 AID34577.1 - 0.00033 19.3 0.0 0.0012 17.5 0.0 1.9 1 1 0 1 1 1 1 Methionine gamma-lyase BPD_transp_1 PF00528.22 AID34578.1 - 3.6e-17 62.7 16.2 3.6e-17 62.7 16.2 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.20 AID34579.1 - 1.4e-57 194.7 0.3 1.6e-57 194.5 0.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 AID34579.1 - 1.1e-07 32.1 0.0 5.1e-07 29.9 0.0 2.1 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 AID34579.1 - 0.00041 20.4 0.4 0.11 12.4 0.1 2.2 1 1 1 2 2 2 2 NMT1/THI5 like ABC_tran PF00005.27 AID34580.1 - 2.7e-31 108.9 0.0 3.8e-31 108.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34580.1 - 3.6e-10 40.1 0.0 0.00041 20.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34580.1 - 1.1e-06 28.2 0.1 0.02 14.3 0.0 2.4 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34580.1 - 0.00018 21.2 0.1 0.00036 20.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 AID34580.1 - 0.0034 17.8 0.0 0.0048 17.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 AID34580.1 - 0.017 13.9 0.0 2.2 7.0 0.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 AID34580.1 - 0.022 14.7 0.1 0.044 13.7 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 AID34580.1 - 0.04 14.4 0.0 0.065 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 AID34580.1 - 0.066 12.2 0.0 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 AID34580.1 - 0.12 11.5 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 AID34580.1 - 0.15 11.9 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 AID34580.1 - 0.16 12.1 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 AID34580.1 - 0.16 11.7 0.0 1.4 8.5 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 AID34580.1 - 0.19 12.0 0.0 0.39 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain B3_4 PF03483.17 AID34581.1 - 5e-15 55.6 0.0 8.2e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain Cupin_2 PF07883.11 AID34582.1 - 2.1e-05 24.1 0.0 2.4e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 AID34582.1 - 0.079 12.9 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain rve PF00665.26 AID34583.1 - 1.4e-19 70.5 0.2 1.9e-19 70.0 0.2 1.2 1 0 0 1 1 1 1 Integrase core domain SMC_N PF02463.19 AID34584.1 - 1.2e-05 24.8 0.0 1.9e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF3014 PF11219.8 AID34584.1 - 0.088 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3014) SMC_ScpB PF04079.16 AID34585.1 - 1.1e-36 125.9 0.0 1.4e-36 125.6 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB MarR PF01047.22 AID34585.1 - 0.1 12.6 0.0 0.94 9.5 0.0 2.2 2 0 0 2 2 2 0 MarR family DUF1403 PF07183.11 AID34586.1 - 3.5e-84 283.0 10.1 4.2e-84 282.8 10.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1403) HTH_13 PF11972.8 AID34586.1 - 0.034 14.2 0.0 0.089 12.9 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_3 PF01381.22 AID34588.1 - 5.9e-07 29.4 0.0 1.4e-06 28.2 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 AID34588.1 - 2.6e-06 27.7 0.0 6.1e-06 26.5 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 AID34588.1 - 0.0017 18.4 0.0 0.0024 17.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34588.1 - 0.0089 15.8 0.0 0.023 14.5 0.0 1.8 1 1 0 1 1 1 1 Homeodomain-like domain MqsA_antitoxin PF15731.5 AID34588.1 - 0.016 15.3 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DUF4447 PF14590.6 AID34588.1 - 0.025 14.4 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) FeoC PF09012.10 AID34588.1 - 0.035 14.2 0.0 9.8 6.3 0.0 2.1 2 0 0 2 2 2 0 FeoC like transcriptional regulator YdaS_antitoxin PF15943.5 AID34588.1 - 0.041 13.8 0.0 0.08 12.8 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_37 PF13744.6 AID34588.1 - 0.088 12.8 0.0 0.16 11.9 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 AID34588.1 - 0.13 12.4 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain RelE PF06296.12 AID34589.1 - 6.4e-35 119.9 0.5 7.3e-35 119.7 0.5 1.0 1 0 0 1 1 1 1 RelE toxin of RelE / RelB toxin-antitoxin system VapB_antitoxin PF09957.9 AID34590.1 - 0.025 14.5 0.2 0.048 13.6 0.2 1.4 1 0 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB Phage_integrase PF00589.22 AID34591.1 - 3.3e-16 59.6 0.0 5.9e-16 58.7 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AID34591.1 - 0.013 15.8 0.1 0.15 12.4 0.0 2.7 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain AAA_31 PF13614.6 AID34592.1 - 4.4e-34 117.9 0.0 7.4e-34 117.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 AID34592.1 - 2.3e-18 66.5 0.0 6.9e-18 64.9 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 AID34592.1 - 2.3e-07 30.4 0.1 0.00033 20.1 0.0 2.2 2 0 0 2 2 2 2 ATPase MipZ CBP_BcsQ PF06564.12 AID34592.1 - 4.1e-07 29.7 1.0 2.9e-05 23.7 1.0 2.8 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MerR PF00376.23 AID34592.1 - 4.4e-05 23.2 0.1 8.5e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.6 AID34592.1 - 0.0018 18.4 0.0 0.0036 17.4 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein ArsA_ATPase PF02374.15 AID34592.1 - 0.0037 16.5 0.1 0.18 10.9 0.0 2.3 2 1 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.11 AID34592.1 - 0.017 14.4 0.3 0.07 12.4 0.0 1.9 2 0 0 2 2 2 0 VirC1 protein Fer4_NifH PF00142.18 AID34592.1 - 0.028 13.9 0.0 0.049 13.1 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LpxK PF02606.14 AID34592.1 - 0.041 13.0 0.0 0.063 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase ParA PF10609.9 AID34592.1 - 0.042 13.3 0.0 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase RepB PF07506.11 AID34593.1 - 3.4e-19 69.7 0.0 5.1e-19 69.1 0.0 1.3 1 0 0 1 1 1 1 RepB plasmid partitioning protein ParBc PF02195.18 AID34593.1 - 2.9e-14 53.1 0.2 6.2e-14 52.1 0.2 1.6 1 0 0 1 1 1 1 ParB-like nuclease domain RP-C PF03428.13 AID34594.1 - 2e-75 252.3 0.1 3.1e-75 251.7 0.1 1.3 1 0 0 1 1 1 1 Replication protein C N-terminal domain RP-C_C PF11800.8 AID34594.1 - 1e-60 205.4 0.0 1.7e-60 204.7 0.0 1.3 1 0 0 1 1 1 1 Replication protein C C-terminal region HTH_IclR PF09339.10 AID34594.1 - 0.00016 21.4 1.7 0.0026 17.5 0.4 3.0 2 1 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 AID34594.1 - 0.00025 20.8 0.0 0.00061 19.6 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 AID34594.1 - 0.0037 17.1 0.0 0.0097 15.8 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 AID34594.1 - 0.0048 16.8 0.0 0.01 15.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 AID34594.1 - 0.059 13.4 0.0 0.18 11.9 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 AID34594.1 - 0.14 12.0 0.0 0.31 11.0 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB CSD PF00313.22 AID34596.1 - 1.1e-21 76.4 0.1 1.2e-21 76.3 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID34596.1 - 0.00054 19.6 0.6 0.00071 19.2 0.6 1.5 1 1 0 1 1 1 1 Ribonuclease B OB domain DDE_Tnp_ISAZ013 PF07592.11 AID34598.1 - 1.6e-09 37.2 0.0 1.7e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain DDE_Tnp_ISAZ013 PF07592.11 AID34599.1 - 3.3e-124 413.9 0.0 3.8e-124 413.7 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain DUF982 PF06169.12 AID34602.1 - 9.5e-14 51.2 1.0 1e-13 51.1 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF982) DUF932 PF06067.11 AID34604.1 - 0.057 13.2 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF932) ParBc PF02195.18 AID34605.1 - 0.072 13.4 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 ParB-like nuclease domain ParBc PF02195.18 AID34606.1 - 0.012 15.9 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 ParB-like nuclease domain HALZ PF02183.18 AID34607.1 - 0.002 18.3 1.3 0.039 14.2 2.1 2.4 2 0 0 2 2 2 1 Homeobox associated leucine zipper RepB PF07506.11 AID34607.1 - 0.0035 17.5 0.8 0.0061 16.7 0.1 1.7 2 0 0 2 2 2 1 RepB plasmid partitioning protein FadA PF09403.10 AID34607.1 - 0.0057 17.1 3.8 0.012 16.0 3.8 1.5 1 0 0 1 1 1 1 Adhesion protein FadA DUF4407 PF14362.6 AID34607.1 - 0.015 14.7 2.0 0.024 14.0 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 AID34607.1 - 0.024 15.1 0.4 0.076 13.5 0.4 2.0 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Sigma70_ECF PF07638.11 AID34607.1 - 0.026 14.4 0.0 0.061 13.2 0.0 1.6 1 0 0 1 1 1 0 ECF sigma factor Tup_N PF08581.10 AID34607.1 - 0.027 14.8 0.1 0.072 13.4 0.1 1.7 1 0 0 1 1 1 0 Tup N-terminal MR_MLE_C PF13378.6 AID34607.1 - 0.058 13.0 1.8 0.094 12.3 1.8 1.3 1 0 0 1 1 1 0 Enolase C-terminal domain-like MarR_2 PF12802.7 AID34607.1 - 0.092 12.7 0.0 0.28 11.1 0.0 1.8 1 0 0 1 1 1 0 MarR family DUF1419 PF07215.11 AID34609.1 - 2.1e-48 163.1 0.0 2.4e-48 162.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1419) HTH_Tnp_1 PF01527.20 AID34614.1 - 1.4e-08 35.0 0.0 1.9e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID34614.1 - 1.7e-05 24.8 0.1 2.9e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID34614.1 - 3.7e-05 23.0 0.0 5.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 AID34614.1 - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain BrkDBD PF09607.10 AID34614.1 - 0.013 15.3 0.5 0.028 14.2 0.5 1.7 1 1 0 1 1 1 0 Brinker DNA-binding domain HTH_29 PF13551.6 AID34614.1 - 0.38 10.8 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix Trans_reg_C PF00486.28 AID34617.1 - 5.3e-19 68.1 0.0 6.2e-19 67.9 0.0 1.0 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Secretin PF00263.21 AID34618.1 - 1.2e-45 155.2 0.1 2e-45 154.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein T2SS-T3SS_pil_N PF13629.6 AID34618.1 - 5.1e-18 64.6 0.0 1.1e-17 63.4 0.0 1.6 1 0 0 1 1 1 1 Pilus formation protein N terminal region BON PF04972.17 AID34618.1 - 7.6e-10 39.0 0.2 2.2e-09 37.5 0.2 1.8 1 0 0 1 1 1 1 BON domain Pilus_CpaD PF09476.10 AID34620.1 - 0.0005 19.9 0.0 0.00054 19.8 0.0 1.0 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) HTH_3 PF01381.22 AID34623.1 - 8.6e-12 44.9 0.1 1.9e-11 43.9 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 AID34623.1 - 8.2e-10 38.9 0.1 8.2e-10 38.9 0.1 2.2 3 1 1 4 4 4 1 Helix-turn-helix domain HTH_19 PF12844.7 AID34623.1 - 2.2e-08 34.0 0.0 6.2e-08 32.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 AID34623.1 - 0.00016 21.6 1.2 0.00061 19.7 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 AID34623.1 - 0.0037 17.1 0.1 0.0099 15.7 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain PI3K_1B_p101 PF10486.9 AID34623.1 - 0.023 12.5 0.2 0.027 12.3 0.2 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit HTH_24 PF13412.6 AID34623.1 - 0.061 12.9 0.1 0.16 11.6 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HNF-1_N PF04814.13 AID34623.1 - 0.11 13.1 0.5 0.23 12.1 0.5 1.5 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus HipA_C PF07804.12 AID34624.1 - 5.8e-48 163.4 0.0 7.3e-48 163.1 0.0 1.1 1 0 0 1 1 1 1 HipA-like C-terminal domain Couple_hipA PF13657.6 AID34624.1 - 5.3e-23 81.5 0.0 1.3e-22 80.2 0.0 1.7 2 0 0 2 2 2 1 HipA N-terminal domain RPN6_C_helix PF18503.1 AID34625.1 - 0.14 11.9 0.0 0.33 10.7 0.0 1.5 2 0 0 2 2 2 0 26S proteasome subunit RPN6 C-terminal helix domain EF-hand_5 PF13202.6 AID34627.1 - 2.6e-11 42.5 2.4 6.6e-06 25.4 0.7 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 AID34627.1 - 3.1e-10 39.1 0.7 0.00069 19.4 0.2 2.5 1 1 1 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 AID34627.1 - 1.3e-08 33.8 9.3 0.00033 20.0 0.1 2.8 2 1 1 3 3 3 2 EF hand EF-hand_7 PF13499.6 AID34627.1 - 7.8e-07 29.5 0.4 0.018 15.5 0.1 2.5 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 AID34627.1 - 0.00044 20.0 6.6 0.013 15.3 0.1 2.8 2 1 1 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 AID34627.1 - 0.00081 19.7 0.0 0.0053 17.1 0.0 2.0 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 AID34627.1 - 0.11 12.3 0.0 1.6 8.7 0.0 2.2 1 1 1 2 2 2 0 EF hand TraK PF06586.11 AID34627.1 - 2.4 7.8 4.6 4.4 6.9 4.2 1.6 1 1 0 1 1 1 0 TraK protein PepSY_2 PF13670.6 AID34627.1 - 6.8 6.8 5.8 17 5.5 5.8 1.8 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain IstB_IS21 PF01695.17 AID34629.1 - 3.1e-28 98.7 0.0 3.7e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 AID34629.1 - 0.0057 17.1 0.0 0.0085 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ResIII PF04851.15 AID34629.1 - 0.0063 16.5 0.0 0.0076 16.3 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA PF00004.29 AID34629.1 - 0.007 16.8 0.0 0.011 16.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 AID34629.1 - 0.024 14.1 0.0 0.034 13.6 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein NACHT PF05729.12 AID34629.1 - 0.031 14.2 0.0 0.069 13.1 0.0 1.6 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 AID34629.1 - 0.035 13.8 0.2 0.14 11.8 0.2 1.9 1 1 0 1 1 1 0 AAA domain TIP49 PF06068.13 AID34629.1 - 0.043 13.0 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_22 PF13401.6 AID34629.1 - 0.051 13.8 0.2 0.27 11.5 0.2 2.1 1 1 1 2 2 2 0 AAA domain CbiA PF01656.23 AID34629.1 - 0.051 13.6 0.0 0.093 12.8 0.0 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_25 PF13481.6 AID34629.1 - 0.056 13.0 0.2 0.14 11.7 0.1 1.6 1 1 1 2 2 2 0 AAA domain Sigma54_activat PF00158.26 AID34629.1 - 0.057 13.1 0.0 0.093 12.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_5 PF07728.14 AID34629.1 - 0.066 13.2 0.1 0.1 12.6 0.1 1.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 AID34629.1 - 0.077 12.5 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region 6PF2K PF01591.18 AID34629.1 - 0.091 12.0 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF87 PF01935.17 AID34629.1 - 0.096 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_28 PF13521.6 AID34629.1 - 0.1 12.9 0.5 0.18 12.0 0.5 1.6 1 1 0 1 1 1 0 AAA domain Torsin PF06309.11 AID34629.1 - 0.11 12.7 0.0 0.18 11.9 0.0 1.4 1 1 0 1 1 1 0 Torsin AAA_29 PF13555.6 AID34629.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Bac_DnaA PF00308.18 AID34629.1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein ABC_tran PF00005.27 AID34629.1 - 0.16 12.4 0.0 0.24 11.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter HATPase_c_4 PF13749.6 AID34630.1 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Putative ATP-dependent DNA helicase recG C-terminal rve PF00665.26 AID34632.1 - 0.00022 21.4 0.0 0.0003 20.9 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34632.1 - 0.012 15.4 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain rve PF00665.26 AID34634.1 - 6.9e-14 52.1 0.0 1.6e-13 50.9 0.0 1.7 1 0 0 1 1 1 1 Integrase core domain DUF772 PF05598.11 AID34636.1 - 6.5e-05 22.9 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DUF3945 PF13101.6 AID34636.1 - 0.02 14.6 0.0 0.031 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3945) rve PF00665.26 AID34637.1 - 2.3e-20 73.0 0.0 3.7e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34637.1 - 9e-05 22.2 0.0 0.00019 21.2 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 AID34637.1 - 0.037 14.3 0.0 0.089 13.0 0.0 1.5 2 0 0 2 2 2 0 DDE domain IstB_IS21 PF01695.17 AID34638.1 - 8.9e-60 201.4 0.0 1.3e-59 200.9 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 AID34638.1 - 0.00014 21.8 0.0 0.00055 19.8 0.0 1.8 2 0 0 2 2 2 1 Bacterial dnaA protein PhoH PF02562.16 AID34638.1 - 0.00024 20.6 0.0 0.00038 20.0 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA PF00004.29 AID34638.1 - 0.0014 19.0 0.0 0.0027 18.1 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 AID34638.1 - 0.0032 17.1 0.0 0.0087 15.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain AT_hook PF02178.19 AID34638.1 - 0.032 14.1 2.2 0.07 13.0 2.2 1.6 1 0 0 1 1 1 0 AT hook motif AAA_11 PF13086.6 AID34638.1 - 0.06 13.1 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Exonuc_VII_S PF02609.16 AID34638.1 - 0.11 12.5 0.1 0.25 11.4 0.1 1.6 1 0 0 1 1 1 0 Exonuclease VII small subunit HyaE PF07449.11 AID34638.1 - 0.13 12.2 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE AAA_30 PF13604.6 AID34638.1 - 0.16 11.7 0.0 0.71 9.6 0.0 2.0 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 AID34641.1 - 8.6e-71 237.6 1.0 1.4e-70 237.0 1.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 AID34641.1 - 1e-28 99.9 6.4 1e-28 99.9 6.4 2.8 3 0 0 3 3 1 1 Signal peptide binding domain SRP54_N PF02881.19 AID34641.1 - 2.9e-21 75.5 0.4 2.9e-21 75.5 0.4 2.2 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain CM_2 PF01817.21 AID34641.1 - 2.8e-10 40.4 1.5 1.5e-09 38.0 0.1 3.0 3 1 1 4 4 3 1 Chorismate mutase type II CbiA PF01656.23 AID34641.1 - 2.7e-06 27.5 0.2 6.1e-06 26.3 0.2 1.7 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.6 AID34641.1 - 2.6e-05 24.4 0.1 5.8e-05 23.3 0.1 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 AID34641.1 - 4.1e-05 22.9 0.1 8.4e-05 21.9 0.1 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_31 PF13614.6 AID34641.1 - 0.00018 21.5 0.2 0.00038 20.4 0.2 1.5 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 AID34641.1 - 0.00068 18.9 2.4 0.0069 15.6 0.1 2.9 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_30 PF13604.6 AID34641.1 - 0.0015 18.3 0.6 0.0015 18.3 0.6 2.7 3 0 0 3 3 2 1 AAA domain AAA_25 PF13481.6 AID34641.1 - 0.002 17.8 0.1 0.0054 16.3 0.1 1.7 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 AID34641.1 - 0.0053 16.1 1.4 0.0059 16.0 0.2 1.6 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_17 PF13207.6 AID34641.1 - 0.0056 17.1 0.1 0.0056 17.1 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 AID34641.1 - 0.0062 16.8 0.0 0.016 15.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.18 AID34641.1 - 0.0091 15.3 0.6 0.013 14.8 0.0 1.5 2 0 0 2 2 1 1 6-phosphofructo-2-kinase ATPase PF06745.13 AID34641.1 - 0.013 14.8 0.2 0.077 12.3 0.0 2.1 2 0 0 2 2 2 0 KaiC ResIII PF04851.15 AID34641.1 - 0.014 15.4 0.3 0.04 13.9 0.2 1.7 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit APS_kinase PF01583.20 AID34641.1 - 0.015 15.2 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_14 PF13173.6 AID34641.1 - 0.018 15.0 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 AID34641.1 - 0.024 14.3 0.1 0.052 13.2 0.1 1.5 1 0 0 1 1 1 0 Thymidylate kinase AAA_18 PF13238.6 AID34641.1 - 0.028 15.0 0.0 0.11 13.1 0.0 2.1 2 0 0 2 2 1 0 AAA domain Mg_chelatase PF01078.21 AID34641.1 - 0.048 13.1 1.0 2.9 7.2 0.1 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 AID34641.1 - 0.051 13.6 0.1 0.12 12.3 0.1 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 AID34641.1 - 0.071 13.2 1.5 0.57 10.3 0.5 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.12 AID34641.1 - 0.077 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 NACHT domain KTI12 PF08433.10 AID34641.1 - 0.087 12.3 0.0 0.19 11.2 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_28 PF13521.6 AID34641.1 - 0.094 13.0 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 AID34641.1 - 0.1 13.0 0.2 0.31 11.5 0.2 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 AID34641.1 - 0.11 12.1 0.3 0.22 11.0 0.0 1.6 2 0 0 2 2 1 0 P-loop containing dynein motor region DUF2075 PF09848.9 AID34641.1 - 0.11 11.7 0.1 0.17 11.1 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 AID34641.1 - 0.13 12.6 1.0 0.42 10.9 0.9 1.8 1 1 0 1 1 1 0 AAA domain SWI2_SNF2 PF18766.1 AID34641.1 - 0.14 11.8 0.4 0.34 10.5 0.4 1.7 1 1 0 1 1 1 0 SWI2/SNF2 ATPase AAA_16 PF13191.6 AID34641.1 - 0.23 11.8 2.1 0.36 11.2 0.1 2.3 3 1 0 3 3 1 0 AAA ATPase domain CM_2 PF01817.21 AID34643.1 - 1.7e-18 66.7 0.2 2.1e-18 66.4 0.2 1.1 1 0 0 1 1 1 1 Chorismate mutase type II DDE_Tnp_IS240 PF13610.6 AID34644.1 - 1.1e-10 41.9 0.0 1.5e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS240 PF13610.6 AID34645.1 - 1.8e-15 57.4 0.4 2.9e-15 56.7 0.4 1.3 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34645.1 - 1.3e-08 34.6 0.3 1.6e-08 34.4 0.3 1.0 1 0 0 1 1 1 1 Transposase IS66 family HTH_Tnp_Tc3_2 PF01498.18 AID34645.1 - 0.0026 18.0 0.0 0.0044 17.2 0.0 1.4 1 0 0 1 1 1 1 Transposase HTH_32 PF13565.6 AID34645.1 - 0.011 16.3 1.3 0.068 13.8 0.1 2.4 2 1 1 3 3 3 0 Homeodomain-like domain HTH_21 PF13276.6 AID34645.1 - 0.028 14.6 0.6 0.05 13.7 0.6 1.5 1 0 0 1 1 1 0 HTH-like domain DUF4158 PF13700.6 AID34647.1 - 1.2e-25 90.3 0.0 2.3e-25 89.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4158) DUF4434 PF14488.6 AID34648.1 - 0.029 14.4 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) DDE_Tnp_ISAZ013 PF07592.11 AID34649.1 - 6.8e-41 140.2 0.0 8e-41 140.0 0.0 1.0 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain DDE_Tnp_1_5 PF13737.6 AID34650.1 - 4e-35 120.5 0.1 7.8e-35 119.6 0.1 1.5 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 AID34650.1 - 6.7e-16 58.6 0.0 9.9e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain AAA_23 PF13476.6 AID34651.1 - 2.4e-11 44.5 3.7 8.6e-10 39.4 3.7 2.5 1 1 0 1 1 1 1 AAA domain DDE_Tnp_IS240 PF13610.6 AID34652.1 - 1.6e-05 25.1 0.0 2.1e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 DDE domain Sod_Fe_C PF02777.18 AID34653.1 - 4e-32 110.4 0.0 7.4e-32 109.6 0.0 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 AID34653.1 - 2.1e-26 92.2 1.3 4.7e-26 91.1 1.3 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain UPF0060 PF02694.15 AID34656.1 - 0.058 13.6 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family HTH_3 PF01381.22 AID34658.1 - 5.8e-11 42.3 0.1 7.9e-07 29.0 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix HTH_31 PF13560.6 AID34658.1 - 2.8e-10 40.4 2.4 3.5e-07 30.5 0.0 2.4 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_37 PF13744.6 AID34658.1 - 1.4e-06 28.2 2.6 0.00054 19.9 0.1 2.7 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_26 PF13443.6 AID34658.1 - 6.1e-06 26.6 0.0 5.9e-05 23.4 0.0 2.1 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain DUF2268 PF10026.9 AID34658.1 - 0.002 17.7 0.0 0.0028 17.3 0.0 1.2 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) HTH_19 PF12844.7 AID34658.1 - 0.1 12.6 0.0 0.73 9.9 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain TPR_1 PF00515.28 AID34661.1 - 4.3e-05 23.2 0.1 5.4e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 AID34661.1 - 0.00025 20.9 0.1 0.00032 20.6 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 AID34661.1 - 0.00045 20.2 0.0 0.00053 20.0 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 AID34661.1 - 0.0041 17.8 0.2 0.0048 17.6 0.2 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 AID34661.1 - 0.0067 16.9 0.1 0.0079 16.7 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 AID34661.1 - 0.022 15.0 0.3 0.03 14.6 0.3 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 AID34661.1 - 0.032 13.9 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 TPR repeat TPR_5 PF12688.7 AID34661.1 - 0.035 14.3 0.0 0.035 14.3 0.0 1.1 1 0 0 1 1 1 0 Tetratrico peptide repeat TPR_7 PF13176.6 AID34661.1 - 0.05 13.7 0.0 0.06 13.4 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat MIT PF04212.18 AID34661.1 - 0.059 13.4 0.1 0.072 13.2 0.1 1.1 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_15 PF13429.6 AID34661.1 - 0.072 12.3 0.0 0.079 12.2 0.0 1.0 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 AID34661.1 - 0.082 12.8 0.5 0.12 12.3 0.5 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat FHIPEP PF00771.20 AID34662.1 - 5.3e-202 672.8 7.3 6.2e-202 672.6 7.3 1.0 1 0 0 1 1 1 1 FHIPEP family Yop-YscD_ppl PF16693.5 AID34663.1 - 0.00011 21.8 0.0 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, periplasmic domain Yop-YscD_cpl PF16697.5 AID34663.1 - 0.015 15.6 0.1 0.029 14.7 0.1 1.5 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain T2SSB PF16537.5 AID34663.1 - 0.028 14.0 0.0 0.061 12.9 0.0 1.5 1 0 0 1 1 1 0 Type II secretion system protein B T2SSC PF11356.8 AID34663.1 - 0.052 13.4 0.2 0.18 11.7 0.0 1.9 2 0 0 2 2 2 0 Type II secretion system protein C BON PF04972.17 AID34663.1 - 0.095 13.0 0.8 0.095 13.0 0.8 2.2 2 0 0 2 2 2 0 BON domain Thrombin_light PF09396.10 AID34663.1 - 0.14 12.0 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Thrombin light chain Flagellin_N PF00669.20 AID34664.1 - 0.025 14.7 1.5 0.027 14.6 1.5 1.0 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region HTH_29 PF13551.6 AID34666.1 - 9.5e-08 31.9 0.6 3.7e-07 30.1 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_38 PF13936.6 AID34666.1 - 6.9e-07 28.9 0.2 9.8e-07 28.4 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34666.1 - 8.6e-06 25.4 0.1 1.6e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.12 AID34666.1 - 1.1e-05 25.3 0.1 1.5e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.12 AID34666.1 - 8.3e-05 22.2 0.1 0.00011 21.8 0.1 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_7 PF02796.15 AID34666.1 - 0.0003 20.8 0.1 0.00048 20.1 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_40 PF14493.6 AID34666.1 - 0.00053 20.4 0.0 0.00064 20.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 AID34666.1 - 0.00054 19.7 0.9 0.0013 18.4 0.1 2.0 2 1 0 2 2 2 1 MerR family regulatory protein HTH_28 PF13518.6 AID34666.1 - 0.006 16.7 0.1 0.011 15.8 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID34666.1 - 0.01 15.2 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MerR_1 PF13411.6 AID34666.1 - 0.01 15.9 0.0 0.021 14.9 0.0 1.5 2 0 0 2 2 1 0 MerR HTH family regulatory protein HTH_36 PF13730.6 AID34666.1 - 0.013 15.4 0.3 0.031 14.2 0.1 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain HemN_C PF06969.16 AID34666.1 - 0.019 15.1 0.0 0.034 14.2 0.0 1.4 1 0 0 1 1 1 0 HemN C-terminal domain HTH_3 PF01381.22 AID34666.1 - 0.025 14.6 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix GcrA PF07750.11 AID34666.1 - 0.026 14.9 0.1 0.034 14.6 0.1 1.3 1 0 0 1 1 1 0 GcrA cell cycle regulator HTH_31 PF13560.6 AID34666.1 - 0.027 14.8 0.1 0.045 14.1 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GerE PF00196.19 AID34666.1 - 0.028 14.0 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 AID34666.1 - 0.03 14.1 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 AID34666.1 - 0.057 13.3 0.1 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 MarR family PTN_MK_C PF01091.18 AID34666.1 - 0.066 13.6 0.2 0.087 13.2 0.2 1.2 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, C-terminal domain HTH_17 PF12728.7 AID34666.1 - 0.073 13.3 0.2 0.15 12.3 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain TnsD PF15978.5 AID34666.1 - 0.076 12.0 0.0 0.076 12.0 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D NUMOD1 PF07453.13 AID34666.1 - 0.078 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 NUMOD1 domain HTH_24 PF13412.6 AID34666.1 - 0.11 12.1 0.1 0.21 11.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Tnp_Tc3_1 PF11427.8 AID34666.1 - 0.13 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Tc3 transposase HTH_35 PF13693.6 AID34666.1 - 0.15 12.1 0.1 0.19 11.8 0.1 1.3 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding Transposase_20 PF02371.16 AID34667.1 - 6e-24 84.2 0.1 1.8e-23 82.7 0.1 1.9 1 1 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 AID34667.1 - 5.5e-17 62.1 0.0 8.7e-17 61.4 0.0 1.3 1 0 0 1 1 1 1 Transposase HTH_32 PF13565.6 AID34668.1 - 0.007 17.0 0.3 0.0081 16.7 0.3 1.3 1 1 0 1 1 1 1 Homeodomain-like domain PAX PF00292.18 AID34668.1 - 0.0074 16.2 0.2 0.011 15.6 0.1 1.4 1 1 0 1 1 1 1 'Paired box' domain DUF1580 PF07618.11 AID34668.1 - 0.057 13.0 1.3 0.097 12.3 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) FHIPEP PF00771.20 AID34670.1 - 3.3e-44 151.4 8.0 3.8e-44 151.3 8.0 1.0 1 0 0 1 1 1 1 FHIPEP family NolX PF05819.11 AID34672.1 - 2.7e-183 610.3 0.3 3.2e-183 610.0 0.3 1.0 1 0 0 1 1 1 1 NolX protein DDE_Tnp_1 PF01609.21 AID34673.1 - 2.4e-31 109.1 0.3 2.9e-31 108.8 0.3 1.1 1 0 0 1 1 1 1 Transposase DDE domain DUF4096 PF13340.6 AID34673.1 - 7e-29 99.9 0.7 1.4e-28 98.9 0.7 1.5 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1_2 PF13586.6 AID34673.1 - 1.5e-15 57.3 0.5 2.4e-15 56.7 0.5 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 AID34673.1 - 0.0019 18.2 0.0 0.0032 17.5 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain Secretin_N PF03958.17 AID34674.1 - 0.044 14.2 0.0 0.062 13.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial type II/III secretion system short domain MEDS PF14417.6 AID34674.1 - 0.14 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain NolB PF17398.2 AID34675.1 - 1.6e-53 181.1 0.3 1.9e-53 180.9 0.3 1.1 1 0 0 1 1 1 1 Nodulation protein NolB T3SS_basalb_I PF17001.5 AID34675.1 - 2e-05 25.1 0.1 0.0039 17.8 0.0 2.1 2 0 0 2 2 2 2 Type III secretion basal body protein I, YscI, HrpB, PscI YscJ_FliF PF01514.17 AID34676.1 - 5.3e-27 94.7 0.0 8.4e-27 94.1 0.0 1.2 1 0 0 1 1 1 1 Secretory protein of YscJ/FliF family NolV PF06635.12 AID34678.1 - 8.4e-113 374.8 0.9 9.3e-113 374.6 0.9 1.0 1 0 0 1 1 1 1 Nodulation protein NolV FliH PF02108.16 AID34678.1 - 1e-08 35.3 0.0 1.4e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Flagellar assembly protein FliH CRISPR_Cse1 PF09481.10 AID34678.1 - 0.063 12.3 0.3 0.076 12.1 0.3 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) ATP-synt_ab PF00006.25 AID34679.1 - 3.6e-68 229.4 0.0 4.7e-68 229.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain T3SS_ATPase_C PF18269.1 AID34679.1 - 7e-24 83.5 0.0 1.1e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 T3SS EscN ATPase C-terminal domain ATP-synt_ab_N PF02874.23 AID34679.1 - 2.7e-08 34.2 1.3 4.6e-08 33.5 0.1 2.1 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain MeaB PF03308.16 AID34679.1 - 0.00016 20.8 1.5 0.00034 19.7 0.2 2.2 3 0 0 3 3 3 1 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC_tran PF00005.27 AID34679.1 - 0.0011 19.4 0.1 0.0022 18.5 0.1 1.5 1 0 0 1 1 1 1 ABC transporter DAP3 PF10236.9 AID34679.1 - 0.0018 17.5 0.1 0.0032 16.7 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 AID34679.1 - 0.0043 17.5 0.1 0.014 15.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 AID34679.1 - 0.0048 17.2 0.0 0.011 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 AID34679.1 - 0.013 14.7 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Sirohm_synth_C PF14823.6 AID34679.1 - 0.015 14.9 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 Sirohaem biosynthesis protein C-terminal ATPase PF06745.13 AID34679.1 - 0.019 14.3 0.0 0.04 13.3 0.0 1.5 1 0 0 1 1 1 0 KaiC MMR_HSR1 PF01926.23 AID34679.1 - 0.024 14.7 0.0 0.047 13.8 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 AID34679.1 - 0.027 14.2 0.0 0.065 13.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 AID34679.1 - 0.038 13.9 0.0 0.075 12.9 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 AID34679.1 - 0.039 13.9 0.1 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 NACHT domain Transglut_core3 PF13471.6 AID34679.1 - 0.13 12.2 1.6 0.23 11.4 0.2 2.0 2 0 0 2 2 2 0 Transglutaminase-like superfamily YscO PF07321.12 AID34680.1 - 0.0015 18.5 17.3 0.0018 18.3 17.3 1.1 1 0 0 1 1 1 1 Type III secretion protein YscO FliMN_C PF01052.20 AID34681.1 - 9.3e-14 51.2 0.2 4.3e-12 45.9 0.0 2.6 3 0 0 3 3 3 2 Type III flagellar switch regulator (C-ring) FliN C-term FliP PF00813.20 AID34682.1 - 1.8e-62 210.7 6.5 2.2e-62 210.4 6.5 1.0 1 0 0 1 1 1 1 FliP family DUF3283 PF11686.8 AID34682.1 - 0.21 11.4 0.0 0.4 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3283) Bac_export_3 PF01313.19 AID34683.1 - 1.6e-16 60.0 8.9 1.9e-16 59.7 8.9 1.1 1 0 0 1 1 1 1 Bacterial export proteins, family 3 ECF-ribofla_trS PF07155.12 AID34683.1 - 7.3e-05 22.8 0.7 8e-05 22.7 0.7 1.0 1 0 0 1 1 1 1 ECF-type riboflavin transporter, S component DUF2613 PF11021.8 AID34683.1 - 0.0048 17.0 0.6 0.0048 17.0 0.6 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2613) Bac_export_1 PF01311.20 AID34684.1 - 6.2e-42 143.7 15.2 7.1e-42 143.5 15.2 1.0 1 0 0 1 1 1 1 Bacterial export proteins, family 1 Bac_export_2 PF01312.19 AID34685.1 - 7.2e-71 239.1 0.0 8.8e-71 238.8 0.0 1.0 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family DEDD_Tnp_IS110 PF01548.17 AID34687.1 - 7.5e-09 35.6 0.0 1.4e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Transposase TetR_C_27 PF17935.1 AID34687.1 - 0.095 12.8 0.2 0.31 11.1 0.1 1.8 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Transposase_mut PF00872.18 AID34688.1 - 0.00067 18.6 0.0 0.00074 18.5 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family rve_3 PF13683.6 AID34689.1 - 1.4e-13 50.4 0.0 1.6e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 AID34689.1 - 0.0038 17.4 0.0 0.0043 17.2 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain HTH_Tnp_1 PF01527.20 AID34690.1 - 7.7e-09 35.8 0.1 1.1e-08 35.2 0.1 1.3 1 1 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID34690.1 - 1.5e-05 25.0 0.1 2.6e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 AID34690.1 - 2.5e-05 23.6 0.1 6e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 AID34690.1 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain BrkDBD PF09607.10 AID34690.1 - 0.013 15.2 0.5 0.027 14.2 0.5 1.6 1 1 0 1 1 1 0 Brinker DNA-binding domain Nsp1_C PF05064.13 AID34690.1 - 0.081 12.7 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Nsp1-like C-terminal region HTH_26 PF13443.6 AID34690.1 - 0.2 12.1 0.2 0.47 10.9 0.0 1.7 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Peripla_BP_4 PF13407.6 AID34692.1 - 7.5e-28 97.8 0.0 2.3e-27 96.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein domain LacI PF00356.21 AID34692.1 - 7.6e-12 44.8 0.2 1.7e-11 43.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_31 PF13560.6 AID34692.1 - 0.00014 22.2 0.1 0.00041 20.6 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 AID34692.1 - 0.0038 17.3 0.0 0.007 16.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 AID34692.1 - 0.039 14.0 0.1 0.37 10.8 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn helix HTH_23 PF13384.6 AID34692.1 - 0.04 13.7 0.1 0.12 12.2 0.0 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_3 PF01381.22 AID34692.1 - 0.097 12.7 0.0 0.25 11.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_6 PF01418.17 AID34692.1 - 0.16 12.0 0.1 0.63 10.1 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family MerR PF00376.23 AID34692.1 - 0.74 9.6 2.3 0.74 9.6 0.2 2.0 2 0 0 2 2 2 0 MerR family regulatory protein Transposase_mut PF00872.18 AID34696.1 - 4.6e-61 206.8 0.0 5.5e-61 206.5 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 AID34696.1 - 1.1e-05 25.8 0.0 2.3e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.6 AID34696.1 - 0.08 13.2 0.0 0.55 10.4 0.0 2.1 1 1 1 2 2 2 0 DDE domain DDE_Tnp_1_5 PF13737.6 AID34698.1 - 1.2e-14 54.6 0.1 1.6e-14 54.2 0.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 AID34699.1 - 1.4e-14 54.3 0.1 2.9e-14 53.2 0.1 1.5 1 1 0 1 1 1 1 Transposase DDE domain BtpA PF03437.15 AID34701.1 - 4.8e-72 242.4 0.1 5.7e-72 242.2 0.1 1.0 1 0 0 1 1 1 1 BtpA family DUF2185 PF09951.9 AID34703.1 - 9.4e-11 41.4 0.0 1.1e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2185) DDE_3 PF13358.6 AID34704.1 - 4.8e-14 52.3 0.0 8.6e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_28 PF13518.6 AID34704.1 - 4.5e-06 26.7 5.3 4e-05 23.6 3.1 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 AID34704.1 - 1.2e-05 25.2 1.8 1.2e-05 25.2 1.8 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 AID34704.1 - 1.4e-05 24.7 2.4 2.2e-05 24.1 0.3 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_17 PF12728.7 AID34704.1 - 0.00011 22.3 1.8 0.036 14.3 0.1 2.8 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_32 PF13565.6 AID34704.1 - 0.00045 20.8 0.9 0.00045 20.8 0.9 3.1 2 2 1 3 3 2 1 Homeodomain-like domain HTH_Tnp_IS630 PF01710.16 AID34704.1 - 0.00051 20.1 0.0 0.0011 19.0 0.0 1.6 1 1 1 2 2 2 1 Transposase HTH_3 PF01381.22 AID34704.1 - 0.02 14.9 0.1 9 6.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix HTH_33 PF13592.6 AID34704.1 - 0.084 12.5 0.1 0.26 10.9 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Tnp_4 PF13613.6 AID34704.1 - 0.11 12.3 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease CENP-B_N PF04218.13 AID34704.1 - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain rve_2 PF13333.6 AID34706.1 - 3.1e-13 49.7 0.2 3.8e-13 49.4 0.2 1.1 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34706.1 - 6.2e-12 45.1 0.1 7.2e-12 44.9 0.1 1.1 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 AID34706.1 - 0.0011 19.1 0.0 0.0023 18.1 0.0 1.5 2 0 0 2 2 2 1 Integrase core domain QueC PF06508.13 AID34710.1 - 2.4e-55 187.3 0.0 2.7e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 AID34710.1 - 0.00016 21.4 0.0 0.0002 21.2 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 AID34710.1 - 0.0039 17.0 0.0 0.046 13.5 0.0 2.0 2 0 0 2 2 2 1 PP-loop family PTPS PF01242.19 AID34711.1 - 5.5e-33 113.5 0.2 6.1e-33 113.4 0.2 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.21 AID34712.1 - 2.5e-07 31.2 0.0 3.5e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 AID34712.1 - 1.8e-06 28.1 0.0 2.7e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 AID34712.1 - 0.0017 18.6 0.0 0.0026 18.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain DSX_dimer PF08828.10 AID34712.1 - 0.6 9.8 2.2 9 6.1 0.3 2.3 2 0 0 2 2 2 0 Doublesex dimerisation domain WXG100 PF06013.12 AID34717.1 - 0.045 14.0 0.4 0.25 11.6 0.1 1.9 1 1 1 2 2 2 0 Proteins of 100 residues with WXG tRNA-synt_1f PF01921.18 AID34720.1 - 0.022 13.7 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (K) DUF3151 PF11349.8 AID34722.1 - 0.0083 16.2 0.1 0.0092 16.1 0.1 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3151) DUF3151 PF11349.8 AID34724.1 - 0.064 13.3 0.0 0.075 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3151) UPF0236 PF06782.11 AID34725.1 - 0.0065 15.2 0.1 0.0091 14.7 0.1 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0236) Protamine_P2 PF00841.19 AID34725.1 - 0.083 13.4 0.1 0.16 12.4 0.1 1.5 1 0 0 1 1 1 0 Sperm histone P2 WXG100 PF06013.12 AID34725.1 - 0.13 12.5 0.3 0.72 10.1 0.1 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG AAA_23 PF13476.6 AID34727.1 - 9.2e-13 49.1 0.0 1.1e-12 49.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 AID34727.1 - 8.8e-09 35.1 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 AID34727.1 - 3.6e-07 29.8 0.0 5.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 AID34727.1 - 2.9e-06 27.2 0.0 2.9e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain DUF2813 PF11398.8 AID34727.1 - 0.00013 21.4 0.0 0.00017 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) RsgA_GTPase PF03193.16 AID34727.1 - 0.022 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 AID34727.1 - 0.036 13.9 0.1 0.049 13.4 0.1 1.3 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 AID34727.1 - 0.087 13.3 0.1 0.094 13.2 0.1 1.3 1 1 0 1 1 1 0 ABC transporter IstB_IS21 PF01695.17 AID34727.1 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein rve PF00665.26 AID34729.1 - 2e-17 63.5 0.1 3.6e-17 62.7 0.1 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 AID34729.1 - 0.0052 16.5 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain IstB_IS21 PF01695.17 AID34730.1 - 1.9e-56 190.6 0.0 2.3e-56 190.3 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 AID34730.1 - 0.00037 20.4 0.0 0.00058 19.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein ResIII PF04851.15 AID34730.1 - 0.0016 18.5 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.16 AID34730.1 - 0.0017 17.9 0.1 0.0063 16.0 0.1 1.8 1 1 1 2 2 2 1 PhoH-like protein AAA PF00004.29 AID34730.1 - 0.017 15.5 0.0 0.026 15.0 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MukB PF04310.12 AID34730.1 - 0.018 14.9 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 MukB N-terminal NACHT PF05729.12 AID34730.1 - 0.021 14.7 0.2 0.29 11.0 0.0 2.3 2 1 0 3 3 3 0 NACHT domain AAA_16 PF13191.6 AID34730.1 - 0.024 15.0 0.1 0.041 14.3 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain Torsin PF06309.11 AID34730.1 - 0.032 14.3 0.0 0.049 13.7 0.0 1.4 1 1 0 1 1 1 0 Torsin AAA_30 PF13604.6 AID34730.1 - 0.038 13.7 0.1 0.15 11.8 0.1 1.9 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 AID34730.1 - 0.049 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 AID34730.1 - 0.06 13.7 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 AID34730.1 - 0.065 12.9 0.1 0.17 11.6 0.0 1.7 1 1 1 2 2 2 0 Sigma-54 interaction domain AAA_5 PF07728.14 AID34730.1 - 0.086 12.8 0.0 0.22 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.17 AID34730.1 - 0.09 12.9 0.1 0.17 12.0 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_22 PF13401.6 AID34730.1 - 0.092 13.0 0.2 0.67 10.2 0.1 2.1 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.6 AID34730.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 AID34730.1 - 0.12 11.9 0.1 0.25 10.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID34730.1 - 0.13 12.5 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 AID34730.1 - 0.16 11.2 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_7 PF12775.7 AID34730.1 - 0.17 11.4 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region 6PF2K PF01591.18 AID34730.1 - 0.17 11.2 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase RNA_helicase PF00910.22 AID34730.1 - 0.2 12.0 0.0 0.4 11.1 0.0 1.6 1 1 0 1 1 1 0 RNA helicase DDE_Tnp_IS240 PF13610.6 AID34731.1 - 3.5e-28 98.6 0.3 4.7e-28 98.2 0.3 1.1 1 0 0 1 1 1 1 DDE domain MULE PF10551.9 AID34731.1 - 0.00054 20.3 0.0 0.0035 17.7 0.0 2.0 2 0 0 2 2 2 1 MULE transposase domain FTH PF01827.27 AID34731.1 - 0.16 11.7 0.1 0.24 11.2 0.1 1.2 1 0 0 1 1 1 0 FTH domain Mod_r PF07200.13 AID34733.1 - 0.53 10.4 6.1 0.44 10.7 0.9 2.5 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein SlyX PF04102.12 AID34733.1 - 2.2 8.9 5.0 5.4 7.7 0.8 3.4 4 0 0 4 4 4 0 SlyX HTH_38 PF13936.6 AID34735.1 - 3.1e-14 52.5 3.2 5e-14 51.8 3.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34735.1 - 1.2e-05 24.9 1.1 1.2e-05 24.9 1.1 1.7 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 AID34735.1 - 0.037 13.7 0.5 0.065 12.9 0.5 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Crp PF00325.20 AID34735.1 - 0.064 12.9 0.3 0.12 12.0 0.3 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family GerE PF00196.19 AID34735.1 - 0.073 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_28 PF13518.6 AID34735.1 - 0.61 10.2 6.2 0.15 12.2 2.9 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain rve_3 PF13683.6 AID34736.1 - 3.7e-05 23.4 0.0 4.9e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 AID34736.1 - 0.00021 21.5 0.0 0.00024 21.2 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain Phage_integrase PF00589.22 AID34738.1 - 2.6e-21 76.2 0.0 2.8e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family Endonuclease_5 PF04493.14 AID34738.1 - 0.13 11.9 0.1 0.16 11.7 0.1 1.3 1 1 0 1 1 1 0 Endonuclease V BPD_transp_1 PF00528.22 AID34739.1 - 5.5e-12 45.8 17.2 5.5e-12 45.8 17.2 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 AID34740.1 - 5.9e-12 45.7 20.5 5.9e-12 45.7 20.5 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_6 PF13343.6 AID34741.1 - 1.2e-34 119.8 0.3 1.6e-34 119.4 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 AID34741.1 - 4.3e-22 79.2 4.5 5.8e-22 78.8 4.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 AID34741.1 - 5.2e-10 39.8 14.8 7.5e-10 39.2 14.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 AID34741.1 - 1.2e-09 38.3 0.9 1.9e-09 37.6 0.9 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DeoRC PF00455.22 AID34743.1 - 5e-36 124.0 0.0 7.2e-36 123.5 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 AID34743.1 - 9.1e-16 57.4 0.0 2.6e-15 55.9 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID34743.1 - 1.9e-07 30.9 0.1 4.1e-07 29.8 0.1 1.5 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 AID34743.1 - 7.8e-07 28.7 0.1 2.1e-06 27.3 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 AID34743.1 - 0.0014 18.7 0.1 0.005 16.9 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 AID34743.1 - 0.0031 17.8 0.1 0.0067 16.8 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator HemN_C PF06969.16 AID34743.1 - 0.0079 16.2 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 1 HemN C-terminal domain MarR PF01047.22 AID34743.1 - 0.025 14.5 0.1 0.088 12.8 0.0 1.9 2 0 0 2 2 2 0 MarR family HTH_36 PF13730.6 AID34743.1 - 0.029 14.3 0.0 0.053 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 AID34743.1 - 0.032 14.3 0.0 0.068 13.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_12 PF08461.10 AID34743.1 - 0.12 12.3 0.1 0.31 11.0 0.1 1.7 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_Crp_2 PF13545.6 AID34743.1 - 0.15 12.1 0.1 0.32 11.0 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF4423 PF14394.6 AID34743.1 - 0.17 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Phosphodiest PF01663.22 AID34744.1 - 9.3e-32 111.0 0.0 1.2e-31 110.6 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 AID34744.1 - 0.00064 19.2 0.0 0.015 14.7 0.0 2.4 2 1 0 2 2 2 1 Sulfatase DDE_Tnp_1_5 PF13737.6 AID34746.1 - 2e-71 237.5 0.4 3e-34 117.7 0.1 2.5 2 0 0 2 2 2 2 Transposase DDE domain DDE_Tnp_1 PF01609.21 AID34746.1 - 2.4e-31 109.1 0.0 2.4e-14 53.5 0.0 2.3 2 0 0 2 2 2 2 Transposase DDE domain YqbF PF14553.6 AID34746.1 - 9.5e-05 22.2 0.0 0.63 9.9 0.0 2.3 2 0 0 2 2 2 2 YqbF, hypothetical protein domain DUF772 PF05598.11 AID34746.1 - 0.019 15.0 0.0 11 6.1 0.0 2.6 2 0 0 2 2 2 0 Transposase domain (DUF772) DUF3192 PF11399.8 AID34746.1 - 0.031 14.2 0.3 14 5.7 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3192) CCSMST1 PF15013.6 AID34746.1 - 0.034 14.3 0.0 16 5.8 0.0 2.4 2 0 0 2 2 2 0 CCSMST1 family SbmA_BacA PF05992.12 AID34746.1 - 0.28 10.6 0.1 25 4.2 0.0 2.1 2 0 0 2 2 2 0 SbmA/BacA-like family Peptidase_M16 PF00675.20 AID34747.1 - 4.2e-23 82.0 0.0 6.9e-23 81.3 0.0 1.3 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 AID34747.1 - 4.8e-11 43.0 0.0 1e-10 41.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain Glyco_hydro_12 PF01670.16 AID34747.1 - 2.8e-05 24.2 2.4 5.9e-05 23.2 2.4 1.6 1 0 0 1 1 1 1 Glycosyl hydrolase family 12 Cation_ATPase_C PF00689.21 AID34748.1 - 8.3e-29 100.6 5.7 9.2e-29 100.4 5.7 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus DDE_Tnp_2 PF04693.12 AID34749.1 - 0.00022 20.6 0.0 0.00026 20.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 AID34749.1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Transposase DDE domain Fer4_10 PF13237.6 AID34751.1 - 1.8e-05 24.8 11.5 3.1e-05 24.0 11.6 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 AID34751.1 - 2.4e-05 24.8 12.3 5.5e-05 23.7 12.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID34751.1 - 2.6e-05 24.1 14.2 0.0033 17.4 1.8 2.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 AID34751.1 - 4.6e-05 23.0 1.9 4.6e-05 23.0 1.9 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 AID34751.1 - 0.00014 21.9 12.4 0.00026 21.1 12.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 AID34751.1 - 0.00018 22.4 5.4 0.00018 22.4 5.4 2.2 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 AID34751.1 - 0.00029 20.8 14.0 0.0012 18.8 2.3 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 AID34751.1 - 0.00095 19.3 13.7 0.0016 18.5 13.7 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 AID34751.1 - 0.011 16.3 3.9 0.011 16.3 3.9 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain GF_recep_IV PF14843.6 AID34751.1 - 0.02 14.7 9.8 0.024 14.4 9.8 1.1 1 0 0 1 1 1 0 Growth factor receptor domain IV Fer4_3 PF12798.7 AID34751.1 - 0.02 15.8 3.7 0.02 15.8 3.7 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 AID34751.1 - 0.084 13.4 19.5 1.1 10.0 6.5 2.9 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 AID34751.1 - 0.19 12.2 14.9 44 4.6 14.9 2.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain NifZ PF04319.13 AID34753.1 - 1.4e-14 53.6 0.1 1.9e-14 53.2 0.1 1.2 1 0 0 1 1 1 1 NifZ domain NifT PF06988.11 AID34754.1 - 1.2e-28 98.7 0.0 1.3e-28 98.5 0.0 1.0 1 0 0 1 1 1 1 NifT/FixU protein PrmC_N PF17827.1 AID34758.1 - 0.1 13.2 0.1 0.92 10.1 0.1 1.9 1 1 1 2 2 2 0 PrmC N-terminal domain DUF3666 PF12408.8 AID34758.1 - 0.17 11.1 0.0 0.24 10.6 0.0 1.3 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase DUF269 PF03270.13 AID34759.1 - 0.031 14.4 0.0 0.049 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF269 DUF3150 PF11348.8 AID34760.1 - 0.064 12.5 0.0 4.1 6.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3150) Oxidored_nitro PF00148.19 AID34761.1 - 3.7e-109 365.1 0.0 4.2e-109 364.9 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 AID34762.1 - 6.4e-85 285.3 0.1 7.6e-85 285.0 0.1 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 AID34764.1 - 1.9e-114 382.5 0.0 2.2e-114 382.3 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase DUF3364 PF11844.8 AID34764.1 - 1.1e-23 83.2 0.2 2.1e-23 82.3 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3364) Oxidored_nitro PF00148.19 AID34765.1 - 5.1e-105 351.5 0.0 5.9e-105 351.3 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Fer4_NifH PF00142.18 AID34766.1 - 2.8e-132 440.2 0.6 3.2e-132 440.0 0.6 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 AID34766.1 - 1.7e-09 37.8 0.0 2.9e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 AID34766.1 - 1e-08 35.3 0.3 2.3e-08 34.2 0.1 1.7 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 AID34766.1 - 1.3e-06 27.9 0.0 3e-06 26.6 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase ParA PF10609.9 AID34766.1 - 8.3e-05 22.2 0.3 0.0023 17.4 0.1 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 AID34766.1 - 0.0042 16.4 0.0 0.0085 15.4 0.0 1.4 1 0 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 AID34766.1 - 0.0064 16.0 0.4 1.6 8.1 0.1 2.3 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 AID34766.1 - 0.013 14.5 0.1 0.029 13.3 0.0 1.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DNA_ligase_A_N PF04675.14 AID34766.1 - 0.023 15.0 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 DNA ligase N terminus AAA_24 PF13479.6 AID34766.1 - 0.039 13.7 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Aminotran_1_2 PF00155.21 AID34769.1 - 0.00018 20.8 0.0 0.00023 20.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II TetR_C_11 PF16859.5 AID34769.1 - 0.0058 16.9 0.8 0.011 16.1 0.8 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HemS PF05171.12 AID34770.1 - 2.4e-80 266.8 0.0 3.3e-39 133.8 0.0 2.1 2 0 0 2 2 2 2 Haemin-degrading HemS.ChuX domain ChuX_HutX PF06228.13 AID34770.1 - 2.2e-58 195.8 0.0 7.5e-31 106.7 0.0 2.1 2 0 0 2 2 2 2 Haem utilisation ChuX/HutX Sec8_exocyst PF04048.14 AID34770.1 - 0.1 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain p450 PF00067.22 AID34772.1 - 3.2e-19 69.0 0.0 2.9e-17 62.6 0.0 2.1 1 1 0 1 1 1 1 Cytochrome P450 SnoaL_4 PF13577.6 AID34773.1 - 1.8e-22 79.8 0.0 2.4e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain Ring_hydroxyl_B PF00866.18 AID34773.1 - 0.00036 20.6 0.0 0.00074 19.6 0.0 1.4 1 0 0 1 1 1 1 Ring hydroxylating beta subunit Lumazine_bd_2 PF12893.7 AID34773.1 - 0.00077 20.1 0.0 0.038 14.7 0.0 2.6 2 1 0 2 2 2 1 Putative lumazine-binding DUF4440 PF14534.6 AID34773.1 - 0.013 15.9 0.0 0.024 15.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 AID34773.1 - 0.076 13.7 0.1 0.14 12.8 0.1 1.4 1 0 0 1 1 1 0 SnoaL-like domain adh_short PF00106.25 AID34774.1 - 1.5e-15 57.2 0.0 1.5e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID34774.1 - 4.7e-12 46.0 0.0 4.9e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID34774.1 - 0.00094 19.1 1.3 0.011 15.7 1.3 2.0 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 AID34774.1 - 0.011 15.1 0.1 0.012 15.1 0.1 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DUF3842 PF12953.7 AID34774.1 - 0.12 12.8 2.0 0.29 11.5 2.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3842) adh_short_C2 PF13561.6 AID34776.1 - 1.5e-28 100.0 0.0 2.7e-27 95.9 0.0 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34776.1 - 1.6e-12 47.3 0.0 2.3e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Bac_luciferase PF00296.20 AID34777.1 - 3.5e-50 171.2 0.0 4.4e-50 170.9 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase NifQ PF04891.12 AID34778.1 - 1.4e-53 181.6 0.3 1.6e-53 181.4 0.3 1.0 1 0 0 1 1 1 1 NifQ zf-CCCH_2 PF14608.6 AID34778.1 - 4 8.0 7.0 2.2 8.9 1.5 2.5 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Sigma54_DBD PF04552.13 AID34779.1 - 2.2e-18 66.5 0.3 2.5e-18 66.3 0.3 1.0 1 0 0 1 1 1 1 Sigma-54, DNA binding domain LEM PF03020.15 AID34779.1 - 0.027 14.1 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 LEM domain Sigma54_DBD PF04552.13 AID34780.1 - 1.4e-43 148.4 0.1 2e-43 147.8 0.1 1.3 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 AID34780.1 - 2.2e-43 148.2 0.0 6.5e-43 146.7 0.0 1.7 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain HTH_IclR PF09339.10 AID34780.1 - 0.0021 17.8 0.1 1.9 8.4 0.0 2.7 2 0 0 2 2 2 2 IclR helix-turn-helix domain Sigma70_r3 PF04539.16 AID34780.1 - 0.17 12.0 0.0 0.6 10.2 0.0 1.8 1 0 0 1 1 1 0 Sigma-70 region 3 Peptidase_C48 PF02902.19 AID34781.1 - 8.1e-08 32.4 0.0 5e-07 29.8 0.0 2.1 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain ScdA_N PF04405.14 AID34783.1 - 0.19 11.4 0.9 0.28 10.9 0.9 1.5 1 1 0 1 1 1 0 Domain of Unknown function (DUF542) Abhydrolase_3 PF07859.13 AID34785.1 - 7.1e-61 205.7 0.3 8.8e-61 205.4 0.3 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 AID34785.1 - 3.2e-11 42.7 0.0 4.1e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 AID34785.1 - 3.4e-05 22.9 0.0 0.0067 15.4 0.0 2.1 2 0 0 2 2 2 2 Carboxylesterase family Thioesterase PF00975.20 AID34785.1 - 0.00045 20.4 0.2 0.00067 19.8 0.2 1.2 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 AID34785.1 - 0.013 14.8 0.7 0.072 12.4 0.1 2.2 2 1 1 3 3 3 0 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 AID34785.1 - 0.018 14.5 0.0 0.052 13.0 0.0 1.9 1 1 0 1 1 1 0 Prolyl oligopeptidase family DUF2974 PF11187.8 AID34785.1 - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) BAAT_C PF08840.11 AID34785.1 - 0.17 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal ADH_N PF08240.12 AID34786.1 - 2.9e-25 88.3 3.0 5.1e-25 87.5 3.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 AID34786.1 - 1.7e-22 79.8 2.3 2.9e-22 79.0 1.1 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 AID34786.1 - 3.2e-09 36.6 0.4 4.9e-09 36.0 0.4 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 AID34786.1 - 5.5e-06 27.5 0.0 2.7e-05 25.3 0.0 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase PALP PF00291.25 AID34786.1 - 0.0009 18.7 1.8 0.0014 18.1 1.8 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme AlaDh_PNT_C PF01262.21 AID34786.1 - 0.0048 16.2 3.3 0.0086 15.4 3.3 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Redoxin PF08534.10 AID34786.1 - 0.14 11.9 0.3 1.2 8.8 0.1 2.2 2 0 0 2 2 2 0 Redoxin Aldedh PF00171.22 AID34787.1 - 1e-151 505.6 0.7 1.2e-151 505.4 0.7 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CSD PF00313.22 AID34791.1 - 8.9e-24 83.1 0.1 9.4e-24 83.1 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 AID34791.1 - 4.8e-05 22.9 0.2 5.8e-05 22.7 0.2 1.4 1 1 0 1 1 1 1 Ribonuclease B OB domain Rho_RNA_bind PF07497.12 AID34791.1 - 0.023 14.6 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain Resolvase PF00239.21 AID34795.1 - 4e-33 114.6 0.2 4.5e-33 114.4 0.2 1.0 1 0 0 1 1 1 1 Resolvase, N terminal domain Glyoxalase_4 PF13669.6 AID34795.1 - 0.084 13.2 0.1 18 5.6 0.0 2.3 2 1 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF881 PF05949.12 AID34795.1 - 0.095 12.6 0.1 13 5.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF881) Malate_DH PF12434.8 AID34795.1 - 0.098 12.7 0.3 0.2 11.7 0.3 1.5 1 0 0 1 1 1 0 Malate dehydrogenase enzyme DDE_Tnp_Tn3 PF01526.17 AID34797.1 - 4.5e-57 193.6 0.0 5e-57 193.4 0.0 1.0 1 0 0 1 1 1 1 Tn3 transposase DDE domain CbiN PF02553.15 AID34798.1 - 0.0021 18.0 0.0 0.0032 17.4 0.0 1.2 1 0 0 1 1 1 1 Cobalt transport protein component CbiN Exonuc_V_gamma PF04257.14 AID34798.1 - 0.032 12.4 0.0 0.039 12.2 0.0 1.0 1 0 0 1 1 1 0 Exodeoxyribonuclease V, gamma subunit Nmad4 PF18756.1 AID34799.1 - 0.043 14.1 0.2 0.046 14.0 0.2 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 4 Sigma54_activat PF00158.26 AID34801.1 - 1.1e-69 233.4 0.1 1.6e-69 232.9 0.1 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 AID34801.1 - 1.1e-20 74.2 0.0 2.6e-20 72.9 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 AID34801.1 - 7.9e-11 41.6 0.1 2.7e-10 39.8 0.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 AID34801.1 - 2e-10 40.8 0.0 3.1e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 AID34801.1 - 1.4e-08 35.2 0.0 2.2e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID34801.1 - 1e-07 31.5 0.1 6.5e-06 25.7 0.1 2.2 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_2 PF07724.14 AID34801.1 - 7.8e-05 22.8 0.0 0.00015 21.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) MCM PF00493.23 AID34801.1 - 0.00014 21.0 0.0 0.00023 20.4 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain AAA_3 PF07726.11 AID34801.1 - 0.0061 16.4 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 AID34801.1 - 0.014 14.9 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_30 PF13604.6 AID34801.1 - 0.017 14.8 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID34801.1 - 0.07 13.4 0.0 0.18 12.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain DDE_Tnp_IS240 PF13610.6 AID34802.1 - 1.6e-35 122.4 0.0 2.3e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34802.1 - 1.9e-09 37.4 0.4 3.2e-09 36.7 0.1 1.5 1 1 0 1 1 1 1 Transposase IS66 family rve PF00665.26 AID34802.1 - 5.7e-07 29.7 0.1 0.00013 22.1 0.0 2.2 1 1 1 2 2 2 2 Integrase core domain HTH_Tnp_Tc3_2 PF01498.18 AID34802.1 - 0.0049 17.1 0.1 0.027 14.7 0.0 2.1 2 0 0 2 2 2 1 Transposase HTH_21 PF13276.6 AID34802.1 - 0.047 13.8 3.1 0.072 13.2 0.5 2.4 2 1 0 2 2 2 0 HTH-like domain MULE PF10551.9 AID34802.1 - 0.047 14.1 0.0 0.12 12.8 0.0 1.6 1 0 0 1 1 1 0 MULE transposase domain DDE_3 PF13358.6 AID34802.1 - 0.047 13.4 0.0 0.08 12.7 0.0 1.4 1 0 0 1 1 1 0 DDE superfamily endonuclease DDE_Tnp_ISAZ013 PF07592.11 AID34802.1 - 0.054 12.5 0.0 5 6.0 0.0 2.1 2 0 0 2 2 2 0 Rhodopirellula transposase DDE domain HTH_32 PF13565.6 AID34802.1 - 0.078 13.6 2.4 0.43 11.2 0.1 2.9 2 1 1 3 3 3 0 Homeodomain-like domain ETF PF01012.21 AID34804.1 - 1.7e-47 161.7 0.1 1.7e-47 161.7 0.1 1.8 2 0 0 2 2 2 1 Electron transfer flavoprotein domain LDB19 PF13002.7 AID34804.1 - 0.046 13.4 0.2 0.16 11.7 0.1 1.9 2 0 0 2 2 2 0 Arrestin_N terminal like SBP_bac_5 PF00496.22 AID34804.1 - 0.11 11.5 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle ETF PF01012.21 AID34805.1 - 4.6e-41 140.7 0.8 9.7e-41 139.6 0.2 1.8 2 0 0 2 2 2 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 AID34805.1 - 4e-33 113.3 3.1 4.1e-33 113.2 1.2 2.1 3 0 0 3 3 3 1 Electron transfer flavoprotein FAD-binding domain DAO PF01266.24 AID34806.1 - 4.5e-11 42.9 0.1 6.8e-05 22.6 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 AID34806.1 - 3.4e-08 33.0 0.6 1.8e-05 24.0 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 AID34806.1 - 8.2e-07 28.7 0.2 1.1e-06 28.3 0.2 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 AID34806.1 - 1.4e-06 27.7 1.0 4.1e-06 26.1 1.0 1.7 1 1 0 1 1 1 1 Glucose inhibited division protein A GDI PF00996.18 AID34806.1 - 3.9e-06 25.6 0.0 0.001 17.7 0.0 2.2 2 0 0 2 2 2 2 GDP dissociation inhibitor NAD_binding_8 PF13450.6 AID34806.1 - 6.7e-06 26.2 0.5 2e-05 24.7 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 AID34806.1 - 1e-05 25.0 2.0 0.0011 18.2 1.8 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 AID34806.1 - 1.2e-05 24.7 0.0 3.4e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 AID34806.1 - 3.3e-05 22.8 0.8 0.0019 17.0 0.2 2.2 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 AID34806.1 - 0.00013 22.5 0.3 0.2 12.2 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 AID34806.1 - 0.00018 20.9 0.6 0.0046 16.2 0.1 2.4 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 AID34806.1 - 0.082 11.9 0.5 0.31 10.1 0.5 1.8 1 1 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 AID34806.1 - 0.095 11.5 0.5 1.8 7.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase ETF_QO PF05187.13 AID34807.1 - 5.3e-07 29.7 0.3 6e-07 29.5 0.3 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_7 PF12838.7 AID34807.1 - 0.03 14.9 4.8 0.058 14.0 4.8 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 AID34807.1 - 0.03 14.4 1.6 0.03 14.4 1.6 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 AID34807.1 - 0.032 14.4 4.4 0.049 13.8 4.4 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID34807.1 - 0.1 12.8 2.3 0.1 12.8 2.3 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_10 PF13237.6 AID34807.1 - 0.47 10.6 7.4 0.16 12.1 2.8 1.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 AID34807.1 - 0.75 9.7 8.4 0.15 11.9 3.2 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 AID34807.1 - 1.2 9.9 7.2 0.25 11.9 2.6 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain ETF_QO PF05187.13 AID34809.1 - 3.9e-07 30.1 0.2 4.2e-07 30.1 0.2 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_7 PF12838.7 AID34809.1 - 0.084 13.5 4.3 0.17 12.5 4.3 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 AID34809.1 - 0.12 12.5 2.7 0.12 12.5 2.7 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.6 AID34809.1 - 0.14 12.3 5.8 0.23 11.7 5.8 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 AID34809.1 - 0.88 9.7 7.8 0.37 10.9 2.7 1.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Radical_SAM PF04055.21 AID34812.1 - 2.4e-28 99.6 0.1 3.9e-28 98.9 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Nitro_FeMo-Co PF02579.17 AID34812.1 - 1.2e-20 73.6 0.1 2.5e-20 72.6 0.1 1.6 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor CdAMP_rec PF06153.11 AID34812.1 - 0.13 12.4 0.0 0.29 11.4 0.0 1.5 1 0 0 1 1 1 0 Cyclic-di-AMP receptor NifZ PF04319.13 AID34814.1 - 5.7e-30 102.9 0.0 7.3e-30 102.6 0.0 1.1 1 0 0 1 1 1 1 NifZ domain GGDEF PF00990.21 AID34815.1 - 1.7e-39 135.2 0.0 3.2e-39 134.3 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain PAS_3 PF08447.12 AID34815.1 - 4.5e-38 129.4 0.2 5.8e-17 61.8 0.4 3.4 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 AID34815.1 - 5e-27 94.1 0.6 3.3e-08 33.5 0.0 3.4 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 AID34815.1 - 1.9e-26 92.3 0.2 2.4e-07 31.0 0.0 3.4 3 0 0 3 3 3 3 PAS domain EAL PF00563.20 AID34815.1 - 6.2e-25 88.1 0.0 1.1e-24 87.2 0.0 1.4 1 0 0 1 1 1 1 EAL domain PAS_4 PF08448.10 AID34815.1 - 2.6e-21 76.0 8.4 1.2e-06 28.7 0.0 4.7 5 0 0 5 5 5 3 PAS fold PAS_8 PF13188.7 AID34815.1 - 7.3e-16 57.8 0.9 0.00024 21.0 0.1 4.5 4 0 0 4 4 4 3 PAS domain PAS_7 PF12860.7 AID34815.1 - 0.00012 22.2 2.9 2.1 8.5 0.0 4.0 3 1 0 3 3 3 2 PAS fold MEKHLA PF08670.11 AID34815.1 - 0.0021 18.0 0.0 0.0049 16.8 0.0 1.6 1 0 0 1 1 1 1 MEKHLA domain HATPase_c PF02518.26 AID34816.1 - 1.8e-19 70.3 0.0 4.9e-19 68.9 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 AID34816.1 - 4.9e-05 23.3 0.2 4.9e-05 23.3 0.2 4.2 5 1 0 5 5 5 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 AID34816.1 - 0.00014 21.8 0.0 0.00028 20.7 0.0 1.5 1 0 0 1 1 1 1 GHKL domain PAS PF00989.25 AID34816.1 - 0.00043 20.3 0.3 0.0022 18.0 0.0 2.3 3 0 0 3 3 3 1 PAS fold PAS_9 PF13426.7 AID34816.1 - 0.0037 17.5 0.0 0.01 16.0 0.0 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 AID34816.1 - 0.012 15.4 0.0 0.021 14.6 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Utp12 PF04003.12 AID34816.1 - 0.09 13.1 0.0 8.4 6.8 0.4 2.7 2 0 0 2 2 2 0 Dip2/Utp12 Family DUF4140 PF13600.6 AID34816.1 - 0.46 11.0 0.0 0.46 11.0 0.0 2.7 2 2 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) GAF_2 PF13185.6 AID34818.1 - 6.1e-09 36.3 0.1 7.7e-09 36.0 0.1 1.1 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 AID34818.1 - 3.2e-07 31.1 0.0 4.1e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 AID34818.1 - 0.04 14.2 0.0 0.059 13.7 0.0 1.2 1 0 0 1 1 1 0 GAF domain MEDS PF14417.6 AID34819.1 - 1.7e-31 109.2 0.1 2.1e-31 108.9 0.1 1.1 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain EHN PF06441.12 AID34819.1 - 0.083 13.3 0.0 0.12 12.7 0.0 1.5 1 1 0 1 1 1 0 Epoxide hydrolase N terminus Sulfatase PF00884.23 AID34824.1 - 6.6e-09 35.6 0.0 2.8e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 Sulfatase Phosphodiest PF01663.22 AID34824.1 - 0.0043 16.7 0.0 0.44 10.1 0.0 2.1 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 AID34824.1 - 0.0052 16.2 0.0 0.093 12.1 0.0 2.0 2 0 0 2 2 2 1 Metalloenzyme superfamily BtrH_N PF14399.6 AID34825.1 - 2e-06 28.1 0.0 3.3e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Butirosin biosynthesis protein H, N-terminal DUF3050 PF11251.8 AID34833.1 - 3e-86 288.8 0.0 3.6e-86 288.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3050) Haem_oxygenas_2 PF14518.6 AID34833.1 - 6.1e-06 26.1 0.0 8.7e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Iron-containing redox enzyme Orn_Arg_deC_N PF02784.16 AID34834.1 - 2.1e-24 86.2 0.0 2.6e-24 86.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 AID34834.1 - 3.7e-10 39.9 0.0 4.6e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 AID34834.1 - 6.8e-07 29.2 0.0 1.2e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Radical_SAM PF04055.21 AID34835.1 - 1.1e-18 68.1 0.1 2.4e-18 67.1 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 AID34835.1 - 1.3e-11 44.6 0.1 5.1e-11 42.7 0.1 2.0 2 0 0 2 2 2 1 B12 binding domain Radical_SAM PF04055.21 AID34836.1 - 2.8e-16 60.3 0.0 4.5e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 AID34836.1 - 3.7e-08 33.7 3.5 7.7e-08 32.7 3.5 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 AID34836.1 - 2.6e-05 24.5 0.0 7.3e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 AID34836.1 - 8.6e-05 22.6 0.0 0.00023 21.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Transket_pyr PF02779.24 AID34837.1 - 1.2e-25 90.2 0.0 1.7e-25 89.7 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 AID34837.1 - 3.3e-19 69.0 0.2 6e-19 68.1 0.2 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transketolase_N PF00456.21 AID34838.1 - 5.4e-35 120.9 0.1 9.4e-35 120.1 0.1 1.3 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 AID34838.1 - 3e-13 49.6 0.1 1.7e-10 40.6 0.2 2.4 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 AID34838.1 - 1.4e-07 30.8 0.0 2.1e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 AID34838.1 - 0.029 14.2 0.7 0.36 10.6 0.7 2.2 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DegT_DnrJ_EryC1 PF01041.17 AID34839.1 - 2.6e-76 257.3 0.0 3.2e-76 257.0 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 AID34839.1 - 2.2e-05 23.2 0.1 3.2e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 AID34839.1 - 0.00058 19.1 0.0 0.00091 18.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II BCA_ABC_TP_C PF12399.8 AID34839.1 - 0.031 14.2 0.3 0.075 13.0 0.3 1.7 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter Phosphodiest PF01663.22 AID34840.1 - 1.2e-25 90.9 0.0 8.7e-15 55.2 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 AID34840.1 - 0.019 14.4 1.0 6.9 6.0 0.0 3.0 3 0 0 3 3 3 0 Sulfatase Metalloenzyme PF01676.18 AID34840.1 - 0.12 11.7 0.5 0.21 10.9 0.5 1.3 1 0 0 1 1 1 0 Metalloenzyme superfamily SnoaL_3 PF13474.6 AID34841.1 - 6.6e-13 49.0 0.0 8.2e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.10 AID34841.1 - 4.8e-07 30.0 0.0 7.4e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II association domain DUF4440 PF14534.6 AID34841.1 - 5.5e-06 26.7 0.0 8.4e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) BTAD PF03704.17 AID34842.1 - 3e-16 60.1 0.8 4.6e-16 59.6 0.8 1.2 1 0 0 1 1 1 1 Bacterial transcriptional activator domain Trans_reg_C PF00486.28 AID34842.1 - 6.8e-05 22.9 0.1 0.00044 20.3 0.0 2.1 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal F-box_4 PF15966.5 AID34842.1 - 0.072 13.0 0.0 0.22 11.4 0.0 1.8 1 0 0 1 1 1 0 F-box Autoind_synth PF00765.17 AID34844.1 - 2.2e-18 66.4 0.0 2.7e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 Autoinducer synthase Acetyltransf_5 PF13444.6 AID34844.1 - 0.00035 21.3 0.0 0.00064 20.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Autoind_bind PF03472.15 AID34845.1 - 3.5e-22 78.5 0.0 5.4e-22 77.9 0.0 1.3 1 0 0 1 1 1 1 Autoinducer binding domain GerE PF00196.19 AID34845.1 - 6.3e-13 48.1 0.0 1.2e-12 47.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID34845.1 - 5.1e-06 26.1 0.2 1.4e-05 24.7 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 AID34845.1 - 0.011 15.5 0.4 0.04 13.7 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.16 AID34845.1 - 0.015 14.8 0.0 0.04 13.5 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_28 PF13518.6 AID34845.1 - 0.016 15.4 0.9 0.036 14.2 0.6 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4096 PF13340.6 AID34846.1 - 1.8e-24 85.7 0.3 2.8e-24 85.1 0.3 1.3 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1 PF01609.21 AID34846.1 - 3.1e-11 43.4 0.0 3.9e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain Harakiri PF15196.6 AID34846.1 - 0.056 13.9 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 Activator of apoptosis harakiri Transposase_20 PF02371.16 AID34847.1 - 6.9e-21 74.4 0.0 2.7e-20 72.5 0.0 2.0 2 1 1 3 3 3 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 AID34847.1 - 8.6e-16 58.2 0.0 1.6e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Transposase TraC_F_IV PF11130.8 AID34847.1 - 0.027 14.1 0.2 0.042 13.4 0.2 1.2 1 0 0 1 1 1 0 F pilus assembly Type-IV secretion system for plasmid transfer DUF772 PF05598.11 AID34849.1 - 4.6e-23 81.0 0.1 6.7e-23 80.5 0.1 1.3 1 0 0 1 1 1 1 Transposase domain (DUF772) ABC_tran PF00005.27 AID34852.1 - 1.6e-14 54.6 0.0 2.6e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID34852.1 - 6.5e-08 32.6 7.2 6.5e-08 32.6 7.2 2.1 2 1 0 2 2 2 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 AID34852.1 - 0.0038 17.2 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase Dynamin_N PF00350.23 AID34852.1 - 0.026 14.6 0.2 0.044 13.8 0.2 1.3 1 0 0 1 1 1 0 Dynamin family MMR_HSR1 PF01926.23 AID34852.1 - 0.041 14.0 0.0 0.073 13.2 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 AID34852.1 - 0.045 14.1 0.0 0.086 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 AID34852.1 - 0.051 13.3 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 AID34852.1 - 0.14 11.4 0.0 0.26 10.6 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_21 PF13304.6 AID34852.1 - 0.18 11.6 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 AID34854.1 - 3.8e-32 111.7 0.0 5.6e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 AID34854.1 - 1.8e-06 27.8 0.6 2.4e-06 27.4 0.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 AID34854.1 - 6.1e-05 23.5 0.0 0.00012 22.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 AID34854.1 - 0.0012 18.6 0.0 0.0027 17.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 AID34854.1 - 0.0038 16.7 0.1 0.13 11.7 0.0 2.0 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 AID34854.1 - 0.013 15.4 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 AID34854.1 - 0.03 14.3 0.0 5.2 7.1 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 AID34854.1 - 0.044 14.0 0.3 0.74 10.1 0.3 2.3 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 AID34854.1 - 0.093 13.0 0.0 0.2 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID34854.1 - 0.11 12.6 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 AID34854.1 - 0.14 12.2 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Se-cys_synth_N PF12390.8 AID34854.1 - 0.16 12.2 1.2 0.38 11.0 0.1 2.3 3 0 0 3 3 3 0 Selenocysteine synthase N terminal AAA_33 PF13671.6 AID34854.1 - 0.27 11.4 1.1 0.5 10.5 1.1 1.7 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 AID34854.1 - 0.28 11.5 3.2 1.4 9.2 0.8 2.6 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit HTH_3 PF01381.22 AID34856.1 - 0.0071 16.4 0.1 2.5 8.3 0.1 2.1 2 0 0 2 2 2 2 Helix-turn-helix HTH_28 PF13518.6 AID34856.1 - 0.037 14.2 0.4 0.063 13.4 0.4 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain rhaM PF05336.13 AID34856.1 - 0.11 12.6 0.0 0.25 11.4 0.0 1.6 1 1 1 2 2 2 0 L-rhamnose mutarotase HTH_8 PF02954.19 AID34857.1 - 0.006 16.3 0.9 0.23 11.3 0.0 2.1 2 0 0 2 2 2 2 Bacterial regulatory protein, Fis family DDE_3 PF13358.6 AID34858.1 - 4.8e-05 23.1 0.0 6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Transposase_mut PF00872.18 AID34859.1 - 6e-61 206.4 0.0 7.2e-61 206.1 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 AID34859.1 - 3.9e-05 24.0 0.0 8.1e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain Sigma54_DBD PF04552.13 AID34860.1 - 1.9e-29 102.5 0.0 2.3e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 Sigma-54, DNA binding domain HTH_38 PF13936.6 AID34860.1 - 0.012 15.4 0.2 0.041 13.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain LacI PF00356.21 AID34860.1 - 0.029 14.2 0.1 0.051 13.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_Crp_2 PF13545.6 AID34860.1 - 0.044 13.8 0.0 0.07 13.1 0.0 1.4 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 AID34860.1 - 0.083 13.0 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_IclR PF09339.10 AID34860.1 - 0.083 12.7 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Phage_CII PF05269.11 AID34860.1 - 0.089 13.0 0.0 0.16 12.2 0.0 1.4 1 1 0 1 1 1 0 Bacteriophage CII protein MarR PF01047.22 AID34860.1 - 0.096 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 MarR family DDE_Tnp_1 PF01609.21 AID34861.1 - 1.9e-14 53.8 0.0 3.6e-14 52.9 0.0 1.4 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 AID34861.1 - 0.055 11.7 0.1 2 6.6 0.0 2.6 3 0 0 3 3 3 0 Transposase DDE domain group 1 Sigma54_DBD PF04552.13 AID34862.1 - 1.2e-22 80.4 0.0 1.2e-22 80.3 0.0 1.0 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sulfotransfer_1 PF00685.27 AID34863.1 - 5.8e-13 48.9 0.0 7.7e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 AID34863.1 - 1.7e-12 48.2 0.0 1.8e-05 25.2 0.0 2.4 1 1 1 2 2 2 2 Sulfotransferase family Luteo_PO PF04662.13 AID34863.1 - 0.087 12.5 0.0 0.23 11.1 0.0 1.7 2 0 0 2 2 2 0 Luteovirus P0 protein ABC2_membrane PF01061.24 AID34864.1 - 1.3e-24 86.8 19.7 1.3e-24 86.8 19.7 1.4 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 AID34864.1 - 1.1e-06 28.0 21.5 1.4e-06 27.7 21.5 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 AID34865.1 - 5.6e-34 117.6 0.0 7.7e-34 117.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34865.1 - 3.1e-13 50.2 1.5 8.7e-09 35.6 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AID34865.1 - 0.00023 21.0 0.0 0.17 11.6 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 AID34865.1 - 0.0036 16.8 0.0 0.027 13.9 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 AID34865.1 - 0.014 15.9 0.0 0.025 15.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 AID34865.1 - 0.049 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 AID34865.1 - 0.052 13.6 0.1 1.1 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 AID34865.1 - 0.052 13.5 0.0 3.8 7.4 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 AID34865.1 - 0.066 13.4 0.0 0.29 11.3 0.0 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 AID34865.1 - 0.085 12.6 0.0 1.3 8.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.29 AID34865.1 - 0.11 13.0 0.0 0.33 11.4 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 AID34865.1 - 0.13 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 AID34865.1 - 0.13 12.5 0.2 0.74 10.1 0.2 2.1 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 AID34865.1 - 0.14 12.0 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 AID34865.1 - 0.15 12.4 0.1 0.48 10.8 0.0 1.8 2 1 0 2 2 2 0 AAA ATPase domain Mg_chelatase PF01078.21 AID34865.1 - 0.17 11.3 0.0 0.32 10.3 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Glycos_transf_2 PF00535.26 AID34866.1 - 2.1e-35 122.0 0.0 3e-35 121.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 AID34866.1 - 5.6e-29 101.7 0.1 7.4e-29 101.3 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 AID34866.1 - 1.6e-25 89.8 1.1 1.1e-21 77.1 0.6 3.0 2 1 0 2 2 2 2 Chitin synthase Glyco_trans_2_3 PF13632.6 AID34866.1 - 3.8e-21 75.9 0.8 5.4e-21 75.4 0.8 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 AID34866.1 - 1.1e-13 51.1 0.1 3e-13 49.6 0.1 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 21 Polysacc_deac_1 PF01522.21 AID34867.1 - 7.6e-34 116.3 0.0 1.1e-33 115.7 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase NodA PF02474.15 AID34867.1 - 0.13 11.9 0.0 0.33 10.6 0.0 1.6 2 0 0 2 2 2 0 Nodulation protein A (NodA) HTH_1 PF00126.27 AID34868.1 - 4e-13 49.1 1.5 9.5e-13 47.9 1.5 1.6 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 AID34868.1 - 3.8e-10 39.5 1.5 3.8e-10 39.5 1.5 1.8 2 0 0 2 2 2 1 LysR substrate binding domain HTH_Tnp_1 PF01527.20 AID34869.1 - 1.2e-17 63.9 1.0 1.6e-17 63.6 1.0 1.2 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 AID34869.1 - 0.00012 22.1 0.1 0.00012 22.1 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34869.1 - 0.0016 18.2 2.8 0.0026 17.5 0.1 2.0 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 AID34869.1 - 0.0019 17.5 0.2 0.003 17.0 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 AID34869.1 - 0.012 15.7 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix MerR_1 PF13411.6 AID34869.1 - 0.023 14.8 0.1 0.053 13.6 0.0 1.7 1 1 0 1 1 1 0 MerR HTH family regulatory protein DivIC PF04977.15 AID34869.1 - 0.064 13.0 1.1 0.1 12.4 0.2 1.7 2 0 0 2 2 2 0 Septum formation initiator DUF746 PF05344.11 AID34869.1 - 0.087 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) BrkDBD PF09607.10 AID34869.1 - 1.7 8.5 4.3 0.72 9.7 0.3 2.3 2 2 1 3 3 3 0 Brinker DNA-binding domain HTH_21 PF13276.6 AID34871.1 - 4.3e-05 23.6 0.0 7.2e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 HTH-like domain Peptidase_C48 PF02902.19 AID34872.1 - 3.2e-11 43.5 0.0 1.5e-10 41.3 0.0 1.9 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Phage_int_SAM_1 PF02899.17 AID34873.1 - 4.7e-07 30.0 0.2 0.0048 17.2 0.0 3.4 3 0 0 3 3 3 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 AID34873.1 - 0.00037 20.9 0.0 0.24 11.9 0.0 2.6 2 0 0 2 2 2 2 Phage integrase, N-terminal SAM-like domain DUF4965 PF16335.5 AID34873.1 - 0.031 13.9 0.0 67 3.1 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4965) DUF772 PF05598.11 AID34874.1 - 0.075 13.1 0.0 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Transposase domain (DUF772) Cpn60_TCP1 PF00118.24 AID34876.1 - 6.5e-16 58.0 0.9 8.4e-16 57.7 0.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MutL PF13941.6 AID34876.1 - 0.0043 15.7 0.3 0.0053 15.4 0.3 1.0 1 0 0 1 1 1 1 MutL protein HalX PF08663.10 AID34876.1 - 0.12 12.7 1.4 0.44 10.9 0.1 2.3 2 0 0 2 2 2 0 HalX domain FlgM PF04316.13 AID34876.1 - 0.26 11.7 2.5 0.53 10.7 2.5 1.5 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM DDE_Tnp_IS66 PF03050.14 AID34877.1 - 8.1e-69 232.2 0.1 5.6e-50 170.4 0.0 2.1 1 1 1 2 2 2 2 Transposase IS66 family zf-IS66 PF13005.7 AID34877.1 - 2.7e-16 59.7 3.6 2.7e-16 59.7 3.6 2.2 2 0 0 2 2 2 1 zinc-finger binding domain of transposase IS66 Zn_ribbon_SprT PF17283.2 AID34877.1 - 0.85 9.6 5.1 1.3 9.0 0.2 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ISL3 PF14690.6 AID34877.1 - 1.2 9.8 7.6 3.9 8.2 7.6 1.9 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE_3 PF13358.6 AID34880.1 - 2.2e-29 102.1 0.0 2.4e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease rve PF00665.26 AID34880.1 - 0.0054 16.9 0.0 0.0063 16.7 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain HTH_32 PF13565.6 AID34881.1 - 1.6e-09 38.2 0.0 8.5e-09 35.9 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain PAX PF00292.18 AID34881.1 - 6.6e-09 35.7 0.1 1e-08 35.2 0.1 1.4 1 1 0 1 1 1 1 'Paired box' domain HTH_Tnp_Tc3_2 PF01498.18 AID34881.1 - 5.2e-06 26.6 0.0 1.2e-05 25.5 0.0 1.6 2 0 0 2 2 2 1 Transposase HTH_Tnp_IS630 PF01710.16 AID34881.1 - 9.9e-06 25.6 0.1 0.00095 19.2 0.0 2.1 2 0 0 2 2 2 1 Transposase HTH_28 PF13518.6 AID34881.1 - 4.8e-05 23.4 0.2 9.3e-05 22.5 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 AID34881.1 - 0.00017 21.3 0.1 0.00087 19.0 0.1 2.0 2 0 0 2 2 2 1 Homeodomain-like domain HTH_33 PF13592.6 AID34881.1 - 0.0021 17.7 0.1 0.025 14.2 0.1 2.5 2 1 1 3 3 3 1 Winged helix-turn helix HTH_Tnp_1 PF01527.20 AID34881.1 - 0.0029 17.9 0.2 0.0042 17.4 0.2 1.4 1 1 0 1 1 1 1 Transposase HTH_29 PF13551.6 AID34881.1 - 0.0062 16.5 0.3 0.0096 15.9 0.3 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 AID34881.1 - 0.008 15.6 0.5 0.055 12.9 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 DDE_Tnp_ISAZ013 PF07592.11 AID34881.1 - 0.03 13.3 0.0 0.038 13.0 0.0 1.2 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain HTH_38 PF13936.6 AID34881.1 - 0.042 13.6 0.0 1.2 8.9 0.0 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain DUF1323 PF07037.11 AID34881.1 - 0.068 13.6 0.0 0.099 13.0 0.0 1.3 1 0 0 1 1 1 0 Putative transcription regulator (DUF1323) Telomere_Sde2_2 PF13297.6 AID34881.1 - 0.085 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Telomere stability C-terminal BrkDBD PF09607.10 AID34881.1 - 0.087 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Brinker DNA-binding domain HTH_21 PF13276.6 AID34881.1 - 0.095 12.8 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 HTH-like domain Tospo_nucleocap PF01533.16 AID34881.1 - 0.11 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Tospovirus nucleocapsid protein DUF1476 PF07345.11 AID34881.1 - 0.15 12.5 0.0 0.38 11.2 0.0 1.6 2 0 0 2 2 2 0 ATPase inhibitor subunit zeta LZ_Tnp_IS481 PF13011.6 AID34881.1 - 0.2 12.2 2.2 0.5 10.9 0.3 2.1 2 1 0 2 2 2 0 leucine-zipper of insertion element IS481 LZ_Tnp_IS66 PF13007.7 AID34882.1 - 2.9e-06 28.0 1.4 2.9e-06 28.0 1.4 1.6 2 0 0 2 2 2 1 Transposase C of IS166 homeodomain DUF1853 PF08907.11 AID34882.1 - 0.049 13.3 0.2 0.049 13.3 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1853) HTH_Tnp_1 PF01527.20 AID34883.1 - 0.016 15.5 0.3 0.03 14.6 0.3 1.4 1 0 0 1 1 1 0 Transposase Cpn60_TCP1 PF00118.24 AID34884.1 - 2e-09 36.6 0.0 2.3e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GCV_T PF01571.21 AID34886.1 - 4.3e-49 167.2 0.0 6.2e-49 166.7 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain NMO PF03060.15 AID34887.1 - 1.8e-55 188.7 2.2 2e-55 188.5 2.2 1.0 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 AID34887.1 - 4.7e-10 39.0 0.9 0.00032 19.8 0.0 2.0 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 AID34887.1 - 0.0023 17.1 0.5 0.004 16.4 0.0 1.5 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.12 AID34887.1 - 0.005 16.0 0.4 0.0093 15.2 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF561) His_biosynth PF00977.21 AID34887.1 - 0.028 13.9 0.3 0.06 12.8 0.3 1.5 1 1 0 1 1 1 0 Histidine biosynthesis protein PEP_hydrolase PF09370.10 AID34887.1 - 0.08 12.2 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate hydrolase-like DHO_dh PF01180.21 AID34887.1 - 0.083 12.1 0.3 0.47 9.6 0.3 1.9 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase FMN_dh PF01070.18 AID34887.1 - 0.15 11.0 8.8 1.7 7.6 6.1 2.2 2 1 0 2 2 2 0 FMN-dependent dehydrogenase ThiG PF05690.14 AID34887.1 - 0.17 11.2 2.8 0.37 10.1 2.8 1.5 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG HTH_1 PF00126.27 AID34888.1 - 4.4e-06 26.5 0.0 4.4e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DDE_Tnp_IS240 PF13610.6 AID34889.1 - 2.2e-30 105.7 0.1 3.5e-30 105.1 0.1 1.3 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 AID34889.1 - 4.8e-06 26.2 0.1 8.6e-06 25.4 0.1 1.4 1 0 0 1 1 1 1 Transposase IS66 family TMEM51 PF15345.6 AID34889.1 - 0.13 12.1 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 ROS_MUCR PF05443.11 AID34890.1 - 2.7e-44 150.2 0.0 3.3e-44 149.9 0.0 1.1 1 0 0 1 1 1 1 ROS/MUCR transcriptional regulator protein DUF4096 PF13340.6 AID34891.1 - 5.1e-29 100.3 0.7 1e-28 99.4 0.7 1.5 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1 PF01609.21 AID34891.1 - 7.8e-29 100.9 0.2 9.7e-29 100.5 0.2 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 AID34891.1 - 2.9e-09 37.2 0.3 5.3e-09 36.3 0.3 1.5 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 AID34891.1 - 0.0015 18.6 0.0 0.0024 17.9 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain Harakiri PF15196.6 AID34891.1 - 0.053 14.0 0.3 0.13 12.7 0.0 1.9 2 0 0 2 2 2 0 Activator of apoptosis harakiri AP_endonuc_2 PF01261.24 AID34896.1 - 1.4e-15 57.3 0.0 2.1e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Ketoacyl-synt_C PF02801.22 AID34898.1 - 2.1e-09 37.4 0.2 2.6e-09 37.1 0.2 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain HTH_1 PF00126.27 AID34899.1 - 2.5e-06 27.4 0.3 3e-06 27.1 0.3 1.1 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family NodA PF02474.15 AID34901.1 - 1.2e-94 315.6 0.1 1.3e-94 315.4 0.1 1.0 1 0 0 1 1 1 1 Nodulation protein A (NodA) RHH_8 PF17723.1 AID34901.1 - 0.022 14.9 0.0 0.033 14.4 0.0 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family DUF4334 PF14232.6 AID34902.1 - 0.15 12.0 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4334) PP-binding PF00550.25 AID34903.1 - 5.3e-08 33.1 0.1 7.9e-08 32.5 0.1 1.5 1 1 0 1 1 1 1 Phosphopantetheine attachment site ketoacyl-synt PF00109.26 AID34904.1 - 3.4e-50 171.0 2.7 3.4e-50 171.0 2.7 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 AID34904.1 - 1.5e-33 115.3 2.2 3.4e-33 114.2 2.2 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 AID34904.1 - 1.1e-06 28.2 5.1 5.4e-06 26.0 0.9 2.3 2 0 0 2 2 2 2 Thiolase, N-terminal domain ACP_syn_III PF08545.10 AID34904.1 - 1.9 8.4 6.4 5.5 6.9 2.7 3.0 2 1 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III adh_short PF00106.25 AID34905.1 - 1.9e-57 193.9 0.2 2.2e-57 193.7 0.2 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 AID34905.1 - 1.4e-46 158.9 0.4 1.6e-46 158.8 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 AID34905.1 - 2.2e-16 60.3 0.1 3.4e-16 59.7 0.1 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 AID34905.1 - 0.0013 18.3 0.1 0.0051 16.3 0.2 1.9 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 AID34905.1 - 0.0031 17.4 0.1 0.0043 17.0 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 AID34905.1 - 0.012 15.9 0.2 0.033 14.5 0.1 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain THF_DHG_CYH_C PF02882.19 AID34905.1 - 0.026 13.9 0.1 0.075 12.3 0.0 1.8 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ldh_1_N PF00056.23 AID34905.1 - 0.03 14.4 0.6 0.085 12.9 0.2 1.9 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain rve_3 PF13683.6 AID34906.1 - 1.1e-06 28.3 0.1 1.2e-06 28.1 0.1 1.0 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 AID34906.1 - 0.00019 21.6 0.0 0.00021 21.4 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain GntR PF00392.21 AID34910.1 - 5.4e-17 61.2 0.1 7e-17 60.8 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 AID34910.1 - 3.6e-05 23.6 0.0 6.1e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_50 PF18024.1 AID34910.1 - 0.00024 20.6 0.0 0.00044 19.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 AID34910.1 - 0.00095 19.0 0.0 0.0018 18.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 AID34910.1 - 0.0011 18.4 0.0 0.002 17.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 AID34910.1 - 0.0054 16.7 0.0 0.0073 16.3 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 AID34910.1 - 0.012 15.5 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB GP3_package PF16677.5 AID34910.1 - 0.015 15.5 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 DNA-packaging protein gp3 HTH_11 PF08279.12 AID34910.1 - 0.015 15.2 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_41 PF14502.6 AID34910.1 - 0.026 14.2 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain RPA_C PF08784.11 AID34910.1 - 0.073 13.7 0.0 0.54 10.9 0.0 1.9 1 1 0 2 2 2 0 Replication protein A C terminal Rrf2 PF02082.20 AID34910.1 - 0.12 12.8 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_36 PF13730.6 AID34910.1 - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Cys_Met_Meta_PP PF01053.20 AID34911.1 - 2.6e-127 424.5 0.0 3e-127 424.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 AID34911.1 - 1.6e-09 37.6 0.4 2e-09 37.2 0.4 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 AID34911.1 - 1.6e-07 30.6 0.0 2.4e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 AID34911.1 - 7e-06 25.5 0.2 1.7e-05 24.2 0.2 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase GDC-P PF02347.16 AID34911.1 - 7.2e-05 21.8 0.1 0.0001 21.3 0.1 1.1 1 0 0 1 1 1 1 Glycine cleavage system P-protein Met_gamma_lyase PF06838.11 AID34911.1 - 0.018 13.6 0.1 0.044 12.3 0.1 1.5 1 1 0 1 1 1 0 Methionine gamma-lyase SelA PF03841.13 AID34911.1 - 0.078 11.9 0.1 1.5 7.8 0.0 2.1 2 0 0 2 2 2 0 L-seryl-tRNA selenium transferase zf-ACC PF17848.1 AID34912.1 - 0.21 11.7 0.4 0.49 10.5 0.1 1.8 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain FMN_bind_2 PF04299.12 AID34913.1 - 6.9e-59 198.3 0.0 8.2e-59 198.1 0.0 1.1 1 0 0 1 1 1 1 Putative FMN-binding domain Peptidase_M20 PF01546.28 AID34914.1 - 0.00071 19.3 0.2 0.00071 19.3 0.2 1.0 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M20 PF01546.28 AID34915.1 - 0.0031 17.2 0.2 0.0035 17.0 0.2 1.0 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M20 PF01546.28 AID34916.1 - 1.1e-16 61.2 0.2 1.5e-16 60.7 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 AID34916.1 - 5.2e-10 39.3 0.0 7.1e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 M20_dimer PF07687.14 AID34916.1 - 0.047 13.6 0.1 0.086 12.8 0.1 1.3 1 0 0 1 1 1 0 Peptidase dimerisation domain ABC_tran PF00005.27 AID34917.1 - 6.8e-14 52.5 0.0 1.1e-13 51.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 AID34917.1 - 1.6e-06 28.1 0.0 2.5e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 AID34917.1 - 2.5e-05 23.8 0.0 2.9e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 AID34917.1 - 0.055 13.7 0.1 0.9 9.8 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NicO PF03824.16 AID34922.1 - 2.7e-91 305.8 17.8 3.5e-91 305.5 17.8 1.1 1 0 0 1 1 1 1 High-affinity nickel-transport protein cobW PF02492.19 AID34923.1 - 2.6e-32 111.8 0.2 3.9e-32 111.3 0.2 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 AID34923.1 - 0.0013 18.6 0.1 0.0013 18.6 0.1 2.4 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B IMPDH PF00478.25 AID34923.1 - 0.031 13.3 0.1 0.047 12.7 0.1 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain NTPase_1 PF03266.15 AID34923.1 - 0.063 13.2 0.0 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 AID34923.1 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain HypA PF01155.19 AID34924.1 - 3.1e-29 101.2 0.1 3.5e-29 101.1 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AIRS_C PF02769.22 AID34925.1 - 1.7e-23 83.5 1.9 3.1e-23 82.6 1.9 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 AID34925.1 - 2.1e-17 63.6 1.1 4.8e-17 62.4 1.1 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain GGDEF_2 PF17853.1 AID34925.1 - 0.012 15.8 0.1 0.049 13.9 0.1 2.0 1 1 1 2 2 2 0 GGDEF-like domain SIS_2 PF13580.6 AID34926.1 - 1.1e-22 80.5 1.6 1.5e-22 80.1 1.6 1.2 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 AID34926.1 - 6.7e-06 26.0 0.0 1.1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 SIS domain NhaB PF06450.12 AID34926.1 - 0.055 12.3 0.1 0.072 11.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) HD_4 PF13328.6 AID34926.1 - 0.066 13.0 0.2 0.49 10.1 0.0 2.0 2 0 0 2 2 2 0 HD domain HypD PF01924.16 AID34927.1 - 1.2e-158 527.8 0.0 1.4e-158 527.6 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HupF_HypC PF01455.18 AID34928.1 - 6.3e-28 96.7 0.5 8.4e-28 96.3 0.5 1.2 1 0 0 1 1 1 1 HupF/HypC family Sua5_yciO_yrdC PF01300.18 AID34929.1 - 1.9e-52 177.3 0.1 2.9e-52 176.8 0.1 1.3 1 0 0 1 1 1 1 Telomere recombination HypF_C PF17788.1 AID34929.1 - 3.8e-32 111.0 1.1 6.8e-32 110.2 1.1 1.4 1 0 0 1 1 1 1 HypF Kae1-like domain zf-HYPF PF07503.12 AID34929.1 - 1.1e-28 98.7 11.9 2.6e-14 52.7 2.3 2.5 2 0 0 2 2 2 2 HypF finger Acylphosphatase PF00708.18 AID34929.1 - 1.3e-18 67.2 0.0 2.3e-18 66.4 0.0 1.4 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.25 AID34929.1 - 0.0012 18.7 0.4 0.013 15.3 0.4 2.1 2 0 0 2 2 2 1 Glycoprotease family DZR PF12773.7 AID34929.1 - 0.036 14.1 4.7 3.7 7.7 0.2 2.6 2 0 0 2 2 2 0 Double zinc ribbon NMD3 PF04981.13 AID34929.1 - 0.083 12.3 1.2 2 7.8 0.9 2.1 1 1 1 2 2 2 0 NMD3 family NHL PF01436.21 AID34930.1 - 3.5e-24 83.6 6.3 0.00031 20.6 0.1 6.8 6 0 0 6 6 6 6 NHL repeat PQQ_3 PF13570.6 AID34930.1 - 0.96 10.0 6.6 22 5.7 0.1 4.7 6 0 0 6 6 6 0 PQQ-like domain NifU PF01106.17 AID34931.1 - 4.6e-20 71.5 0.0 1.5e-19 69.9 0.0 2.0 1 0 0 1 1 1 1 NifU-like domain Rieske PF00355.26 AID34931.1 - 1.5e-18 66.5 0.1 2.6e-18 65.8 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 AID34931.1 - 2.5e-11 43.5 0.0 7.1e-11 42.0 0.0 1.8 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain AraC_N PF06719.13 AID34931.1 - 0.028 14.0 0.1 0.047 13.3 0.1 1.3 1 0 0 1 1 1 0 AraC-type transcriptional regulator N-terminus MLTR_LBD PF17765.1 AID34931.1 - 0.045 13.9 0.7 0.064 13.4 0.7 1.3 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain BAAT_C PF08840.11 AID34933.1 - 0.39 10.6 0.9 0.42 10.5 0.5 1.2 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal TadZ_N PF16968.5 AID34934.1 - 0.027 14.1 0.0 0.72 9.5 0.0 2.3 2 0 0 2 2 2 0 Pilus assembly protein TadZ N-terminal DUF4504 PF14953.6 AID34934.1 - 0.028 13.8 0.0 0.044 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) MIT PF04212.18 AID34934.1 - 0.039 14.0 5.5 8 6.6 0.5 4.5 4 0 0 4 4 4 0 MIT (microtubule interacting and transport) domain CCP_MauG PF03150.14 AID34934.1 - 0.057 14.1 3.1 9.4 6.9 0.1 3.2 1 1 1 2 2 2 0 Di-haem cytochrome c peroxidase TPR_11 PF13414.6 AID34934.1 - 0.87 9.3 10.5 9.3 6.0 0.1 5.0 5 0 0 5 5 5 0 TPR repeat TPR_1 PF00515.28 AID34934.1 - 3 7.8 20.7 9.1 6.3 0.1 6.9 9 0 0 9 9 9 0 Tetratricopeptide repeat HycI PF01750.18 AID34936.1 - 2.8e-11 43.3 0.0 3.7e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.19 AID34939.1 - 1.1e-75 255.5 0.0 2.7e-57 194.8 0.0 2.3 1 1 1 2 2 2 2 Nickel-dependent hydrogenase Oxidored_q6 PF01058.22 AID34940.1 - 1.9e-31 108.6 0.0 2.8e-31 108.1 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 AID34940.1 - 3.6e-23 81.7 2.7 8.1e-23 80.6 2.7 1.6 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal zinc_ribbon_4 PF13717.6 AID34941.1 - 0.33 10.9 4.0 3.5 7.6 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 AID34941.1 - 3.5 7.0 8.3 1.9 7.9 1.6 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger Sigma54_activat PF00158.26 AID34942.1 - 7.4e-61 204.7 0.0 1.1e-60 204.2 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 AID34942.1 - 4.4e-20 72.2 0.0 1.3e-19 70.7 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 AID34942.1 - 1.1e-11 44.3 0.2 6.1e-11 41.9 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 AID34942.1 - 2.3e-06 27.6 0.0 5.1e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Response_reg PF00072.24 AID34942.1 - 3e-06 27.4 0.0 5.9e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain HTH_50 PF18024.1 AID34942.1 - 6.2e-06 25.7 0.1 3.1e-05 23.5 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain AAA_2 PF07724.14 AID34942.1 - 0.0013 18.9 0.0 0.0055 16.8 0.0 2.1 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 AID34942.1 - 0.0045 17.4 0.0 0.015 15.7 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 AID34942.1 - 0.027 13.9 0.0 4.1 6.7 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 AID34942.1 - 0.11 11.6 0.0 0.19 10.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein LysR_substrate PF03466.20 AID34943.1 - 4e-47 160.3 0.0 6.3e-47 159.6 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 AID34943.1 - 1.9e-16 59.7 0.2 3.5e-16 58.9 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.7 AID34943.1 - 9.3e-09 34.7 0.0 3.5e-08 32.8 0.0 1.9 1 1 1 2 2 2 1 PBP superfamily domain FBPase PF00316.20 AID34944.1 - 3.8e-44 150.4 0.0 4.6e-44 150.2 0.0 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Inositol_P PF00459.25 AID34944.1 - 0.044 13.3 0.0 0.065 12.7 0.0 1.2 1 0 0 1 1 1 0 Inositol monophosphatase family OrgA_MxiK PF09482.10 AID34945.1 - 0.085 12.7 0.0 0.13 12.1 0.0 1.3 1 1 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) PRK PF00485.18 AID34946.1 - 1.1e-70 237.3 0.0 1.4e-70 237.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Transketolase_N PF00456.21 AID34947.1 - 8.3e-139 462.2 0.0 1.2e-138 461.6 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 AID34947.1 - 6.8e-51 172.5 1.0 1.5e-50 171.3 0.1 2.0 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 AID34947.1 - 1.4e-11 44.2 0.0 1.1e-07 31.3 0.0 2.4 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_C PF02780.20 AID34947.1 - 8.4e-09 35.4 0.0 2.5e-08 33.9 0.0 1.8 1 1 0 1 1 1 1 Transketolase, C-terminal domain E1_dh PF00676.20 AID34947.1 - 2.2e-08 33.4 0.0 3.9e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 AID34947.1 - 6.4e-07 29.3 0.9 1.2e-05 25.1 0.9 2.6 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Gp_dh_C PF02800.20 AID34948.1 - 5.8e-62 207.9 0.1 8.6e-62 207.4 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 AID34948.1 - 3.3e-37 126.9 0.1 8.2e-37 125.6 0.1 1.7 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 AID34948.1 - 0.0012 19.5 0.1 0.0033 18.1 0.1 1.7 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 AID34948.1 - 0.0036 17.4 0.1 0.0099 16.0 0.1 2.0 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.17 AID34948.1 - 0.024 15.2 0.6 0.69 10.5 0.6 2.4 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ADH_zinc_N PF00107.26 AID34948.1 - 0.038 14.0 0.0 0.083 12.9 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase BacteriocIIc_cy PF12173.8 AID34948.1 - 0.062 13.6 0.1 0.34 11.2 0.0 2.1 2 0 0 2 2 2 0 Bacteriocin class IIc cyclic gassericin A-like GFO_IDH_MocA PF01408.22 AID34948.1 - 0.064 14.1 0.2 0.28 12.0 0.1 2.2 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold PGK PF00162.19 AID34949.1 - 1.4e-134 448.8 0.0 1.6e-134 448.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase PARP PF00644.20 AID34949.1 - 0.2 11.2 0.0 0.35 10.4 0.0 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain F_bP_aldolase PF01116.20 AID34950.1 - 6.7e-89 298.1 0.5 8e-89 297.8 0.5 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II RuBisCO_large PF00016.20 AID34951.1 - 5.7e-135 449.3 0.6 6.9e-135 449.0 0.6 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 AID34951.1 - 1.9e-42 144.2 0.0 4.3e-42 143.1 0.0 1.6 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain RuBisCO_small PF00101.20 AID34952.1 - 2.7e-38 129.8 0.0 3.3e-38 129.6 0.0 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase, small chain AAA PF00004.29 AID34953.1 - 2e-16 60.6 0.0 3.5e-16 59.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_6 PF17866.1 AID34953.1 - 2.5e-15 56.4 0.4 7.3e-15 54.9 0.4 1.9 1 0 0 1 1 1 1 AAA lid domain AAA_22 PF13401.6 AID34953.1 - 2.7e-06 27.7 0.1 0.033 14.5 0.1 2.5 1 1 1 2 2 2 2 AAA domain AAA_5 PF07728.14 AID34953.1 - 1.9e-05 24.6 0.0 4e-05 23.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID34953.1 - 0.00025 20.5 0.3 0.018 14.4 0.1 2.2 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.15 AID34953.1 - 0.00081 19.3 0.1 0.0015 18.5 0.1 1.5 1 1 0 1 1 1 1 NTPase RuvB_N PF05496.12 AID34953.1 - 0.0079 16.0 1.1 0.066 13.0 0.8 2.5 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 AID34953.1 - 0.0079 16.6 0.1 0.016 15.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain DUF2075 PF09848.9 AID34953.1 - 0.013 14.8 0.2 0.065 12.5 0.2 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_2 PF07724.14 AID34953.1 - 0.016 15.3 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ComP_DUS PF16732.5 AID34953.1 - 0.021 15.7 0.0 0.042 14.7 0.0 1.5 1 0 0 1 1 1 0 Type IV minor pilin ComP, DNA uptake sequence receptor AAA_19 PF13245.6 AID34953.1 - 0.021 15.1 0.1 0.061 13.6 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 AID34953.1 - 0.03 14.5 0.0 0.067 13.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 AID34953.1 - 0.032 14.4 0.0 0.07 13.2 0.0 1.6 1 0 0 1 1 1 0 Torsin Sigma54_activat PF00158.26 AID34953.1 - 0.033 13.9 0.1 0.98 9.1 0.1 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_30 PF13604.6 AID34953.1 - 0.035 13.8 0.0 0.081 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 AID34953.1 - 0.042 13.8 0.0 0.15 12.0 0.0 1.9 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_18 PF13238.6 AID34953.1 - 0.044 14.3 0.1 0.11 13.1 0.1 1.8 1 1 0 1 1 1 0 AAA domain Zot PF05707.12 AID34953.1 - 0.073 12.7 0.1 15 5.2 0.0 2.3 1 1 0 2 2 2 0 Zonular occludens toxin (Zot) KTI12 PF08433.10 AID34953.1 - 0.11 11.9 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_7 PF12775.7 AID34953.1 - 0.13 11.8 0.1 0.32 10.5 0.1 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region CbiA PF01656.23 AID34953.1 - 0.13 12.3 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_11 PF13086.6 AID34953.1 - 0.16 11.8 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 AID34953.1 - 0.18 10.7 0.4 0.33 9.8 0.1 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_28 PF13521.6 AID34953.1 - 0.38 11.0 2.1 0.82 9.9 0.2 2.3 2 1 1 3 3 3 0 AAA domain Ribul_P_3_epim PF00834.19 AID34954.1 - 7.8e-83 276.7 0.1 9.2e-83 276.5 0.1 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 AID34954.1 - 0.023 14.5 0.0 3.2 7.5 0.0 2.2 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain HAD_2 PF13419.6 AID34955.1 - 1.5e-32 113.1 0.0 1.8e-32 112.9 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID34955.1 - 6.4e-18 65.8 0.2 1.1e-17 65.1 0.2 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID34955.1 - 6.4e-15 55.0 0.5 6.1e-14 51.8 0.1 2.3 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 AID34955.1 - 4.8e-14 53.2 0.3 9.1e-14 52.3 0.2 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 AID34955.1 - 0.0043 17.1 0.1 0.073 13.2 0.1 2.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 AID34955.1 - 0.22 11.2 0.1 2.7 7.7 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 AID34956.1 - 1.3e-27 97.1 0.0 1.6e-27 96.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID34956.1 - 2.7e-15 57.2 0.0 3.8e-14 53.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID34956.1 - 6.4e-05 22.9 0.0 0.00017 21.6 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 AID34956.1 - 0.0066 16.9 0.0 0.01 16.3 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cas9_Topo PF17894.1 AID34956.1 - 0.013 15.6 0.0 0.034 14.2 0.0 1.7 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 Pirin_C_2 PF17954.1 AID34957.1 - 0.13 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Quercetinase C-terminal cupin domain CPSase_L_D2 PF02786.17 AID34960.1 - 2.3e-67 226.6 0.8 7.5e-66 221.6 0.0 2.2 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 AID34960.1 - 2.4e-14 53.7 0.0 6.7e-14 52.3 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp_4 PF13535.6 AID34960.1 - 0.0029 17.2 0.0 0.01 15.5 0.0 1.9 2 1 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 AID34960.1 - 0.035 13.8 0.0 0.081 12.7 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D3 PF02787.19 AID34961.1 - 1.3e-11 44.9 0.1 2.1e-11 44.2 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NP1-WLL PF11733.8 AID34961.1 - 0.22 11.3 3.5 0.24 11.1 3.5 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 CPSase_L_D2 PF02786.17 AID34962.1 - 3.8e-26 91.9 0.0 1e-15 57.8 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain MGS PF02142.22 AID34962.1 - 6.9e-20 71.0 0.2 2.5e-19 69.3 0.1 2.0 2 0 0 2 2 2 1 MGS-like domain ATPgrasp_Ter PF15632.6 AID34962.1 - 3.3e-07 30.1 0.1 3.1e-06 26.9 0.1 2.2 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 AID34962.1 - 0.00012 22.2 0.0 0.00036 20.6 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 AID34962.1 - 0.001 18.7 0.0 0.62 9.6 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain IU_nuc_hydro PF01156.19 AID34963.1 - 6.3e-78 262.4 4.6 7.2e-78 262.2 4.6 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase 2-Hacid_dh_C PF02826.19 AID34964.1 - 3.1e-49 166.7 0.0 7.5e-49 165.5 0.0 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 AID34964.1 - 1.4e-27 95.9 0.0 1.8e-27 95.6 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ureidogly_lyase PF04115.12 AID34965.1 - 6.3e-30 104.3 0.0 3.4e-28 98.7 0.0 2.0 1 1 0 1 1 1 1 Ureidoglycolate lyase Polysacc_deac_1 PF01522.21 AID34966.1 - 2.2e-12 47.0 0.0 3.7e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase FCD PF07729.12 AID34967.1 - 5.4e-19 68.9 5.7 5.4e-19 68.9 5.7 1.5 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 AID34967.1 - 1.1e-10 41.1 0.4 5.9e-10 38.7 0.0 2.4 2 1 1 3 3 3 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 AID34967.1 - 0.00081 19.2 0.0 0.0017 18.2 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4 PF04545.16 AID34967.1 - 0.024 14.1 1.8 0.063 12.8 0.0 2.6 3 0 0 3 3 3 0 Sigma-70, region 4 Rrf2 PF02082.20 AID34967.1 - 0.043 14.2 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_23 PF13384.6 AID34967.1 - 0.16 11.8 0.9 0.64 9.9 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain HTH_24 PF13412.6 AID34967.1 - 0.4 10.3 1.7 0.63 9.6 0.0 2.3 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Epimerase PF01370.21 AID34968.1 - 5.8e-46 156.9 0.1 7.6e-46 156.5 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 AID34968.1 - 1.1e-33 117.1 0.0 1.1e-32 113.8 0.0 2.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 AID34968.1 - 1.4e-16 60.5 0.1 1.7e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 AID34968.1 - 2.6e-15 56.2 0.0 3.5e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 AID34968.1 - 1.6e-13 50.5 0.1 1.9e-08 33.8 0.8 3.1 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 AID34968.1 - 1.9e-12 46.9 0.4 8.5e-11 41.5 0.0 2.2 1 1 1 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 AID34968.1 - 2.6e-05 24.2 0.9 4.8e-05 23.3 0.9 1.4 1 1 0 1 1 1 1 NAD(P)H-binding FtsZ_C PF12327.8 AID34968.1 - 0.0028 17.9 0.3 0.0061 16.8 0.0 1.7 2 0 0 2 2 2 1 FtsZ family, C-terminal domain E1-N PF14463.6 AID34968.1 - 0.057 13.2 1.4 0.23 11.2 0.2 2.2 2 0 0 2 2 2 0 E1 N-terminal domain adh_short PF00106.25 AID34968.1 - 0.16 11.5 2.7 5.2 6.5 0.0 2.7 2 1 0 2 2 2 0 short chain dehydrogenase KR PF08659.10 AID34968.1 - 0.6 10.0 5.3 19 5.1 3.5 3.0 2 1 0 2 2 2 0 KR domain adh_short_C2 PF13561.6 AID34971.1 - 1.6e-13 50.8 0.0 1.7e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 AID34971.1 - 0.12 11.8 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Amidohydro_1 PF01979.20 AID34972.1 - 6.3e-25 88.2 0.0 1.1e-23 84.1 0.0 2.7 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 AID34972.1 - 2.9e-16 60.0 3.0 1.1e-09 38.4 0.1 2.9 3 0 0 3 3 3 2 Amidohydrolase family FtsJ PF01728.19 AID34972.1 - 0.034 14.3 0.0 0.058 13.5 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Urease_alpha PF00449.20 AID34972.1 - 0.052 13.9 0.1 0.28 11.5 0.1 2.1 2 0 0 2 2 2 0 Urease alpha-subunit, N-terminal domain DUF4388 PF14332.6 AID34972.1 - 0.17 12.2 0.0 1.1 9.6 0.0 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4388) Hydrolase_6 PF13344.6 AID34973.1 - 4.9e-16 58.7 0.0 1.2e-15 57.4 0.0 1.7 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 AID34973.1 - 1.4e-08 34.7 0.2 2.1e-07 30.9 0.0 2.5 3 0 0 3 3 3 1 HAD-hyrolase-like HAD_2 PF13419.6 AID34973.1 - 0.00011 22.4 0.0 0.19 11.8 0.0 2.2 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 AID34973.1 - 0.00024 21.4 0.0 0.0019 18.5 0.0 2.2 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 AID34973.1 - 0.0028 18.1 0.1 0.0097 16.3 0.0 1.9 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.21 AID34973.1 - 0.094 13.1 0.0 0.28 11.6 0.0 1.7 2 0 0 2 2 2 0 Radical SAM superfamily ILVD_EDD PF00920.21 AID34976.1 - 2.4e-146 488.4 0.2 2.7e-146 488.2 0.2 1.0 1 0 0 1 1 1 1 Dehydratase family BPD_transp_2 PF02653.16 AID34977.1 - 4.4e-35 121.1 33.6 5.4e-35 120.9 33.6 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 AID34978.1 - 5.2e-43 147.1 28.9 5.2e-43 147.1 28.9 2.0 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 AID34979.1 - 8.1e-47 159.2 0.0 5e-30 104.8 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 AID34979.1 - 3.1e-09 37.1 1.3 0.00046 20.1 0.1 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 AID34979.1 - 8.1e-05 22.5 0.0 0.01 15.5 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 AID34979.1 - 0.00018 21.2 0.1 0.00085 19.0 0.0 2.2 3 0 0 3 3 3 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 AID34979.1 - 0.00065 19.6 1.1 0.026 14.4 0.0 2.6 3 0 0 3 3 3 1 RsgA GTPase SMC_N PF02463.19 AID34979.1 - 0.0054 16.2 0.0 0.33 10.4 0.0 2.5 2 1 1 3 3 3 1 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 AID34979.1 - 0.019 14.2 0.0 0.033 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_27 PF13514.6 AID34979.1 - 0.025 14.2 0.0 0.06 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 AID34979.1 - 0.03 14.6 0.1 0.73 10.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 AID34979.1 - 0.031 14.8 0.0 0.054 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 AID34979.1 - 0.042 13.9 0.2 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase Bac_DnaA PF00308.18 AID34979.1 - 0.15 11.9 0.2 0.53 10.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial dnaA protein Bmp PF02608.14 AID34980.1 - 1.4e-61 208.1 1.7 1.7e-61 207.8 1.7 1.0 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like PrpR_N PF06506.11 AID34980.1 - 0.031 13.8 0.0 0.075 12.6 0.0 1.6 2 0 0 2 2 2 0 Propionate catabolism activator BtpA PF03437.15 AID34981.1 - 9.2e-49 166.2 0.0 1.1e-48 165.9 0.0 1.0 1 0 0 1 1 1 1 BtpA family B12-binding PF02310.19 AID34981.1 - 0.0083 16.2 0.2 0.17 11.9 0.0 2.2 2 0 0 2 2 2 1 B12 binding domain SIS PF01380.22 AID34982.1 - 1.5e-17 63.7 0.0 3.3e-13 49.6 0.0 2.2 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 AID34982.1 - 0.0018 18.3 1.8 0.32 11.0 0.0 3.5 2 2 1 4 4 4 2 SIS domain Phasin_2 PF09361.10 AID34982.1 - 0.081 13.2 2.4 16 5.8 0.1 3.4 3 0 0 3 3 3 0 Phasin protein PfkB PF00294.24 AID34983.1 - 5e-20 72.0 0.0 6.1e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase UTRA PF07702.13 AID34984.1 - 6.6e-27 94.1 0.1 1.4e-26 93.0 0.0 1.6 2 0 0 2 2 2 1 UTRA domain GntR PF00392.21 AID34984.1 - 7.2e-18 64.0 0.4 1.8e-17 62.7 0.4 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 AID34984.1 - 0.023 14.6 0.0 0.053 13.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 AID34984.1 - 0.04 13.9 0.1 0.1 12.6 0.1 1.7 1 0 0 1 1 1 0 HTH domain HTH_10 PF04967.12 AID34984.1 - 0.057 13.2 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_Crp_2 PF13545.6 AID34984.1 - 0.076 13.0 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain AbiEi_1 PF09407.10 AID34987.1 - 0.015 15.6 0.2 0.025 14.9 0.0 1.6 2 0 0 2 2 2 0 AbiEi antitoxin C-terminal domain AbiEi_3_N PF17194.4 AID34987.1 - 0.018 15.1 0.0 0.034 14.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain AbiEii PF08843.11 AID34988.1 - 3.7e-18 66.3 0.0 4.7e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system AbiEii PF08843.11 AID34989.1 - 1.7e-06 28.1 0.0 1.8e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system AP_endonuc_2 PF01261.24 AID34992.1 - 1.2e-15 57.5 0.3 6.7e-15 55.1 0.2 1.8 1 1 1 2 2 2 1 Xylose isomerase-like TIM barrel Peripla_BP_4 PF13407.6 AID34993.1 - 3.4e-29 102.2 0.0 9.9e-29 100.7 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein domain LacI PF00356.21 AID34993.1 - 2.3e-12 46.5 1.0 4.8e-12 45.5 1.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_3 PF13377.6 AID34993.1 - 0.00018 21.9 0.9 0.14 12.5 0.1 2.6 3 0 0 3 3 3 2 Periplasmic binding protein-like domain HTH_31 PF13560.6 AID34993.1 - 0.0018 18.6 0.3 0.0067 16.8 0.3 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 AID34993.1 - 0.068 13.2 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix Hydrolase PF00702.26 AID34993.1 - 0.082 13.2 0.1 0.65 10.2 0.1 2.5 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Formyl_trans_N PF00551.19 AID34993.1 - 0.087 12.6 0.0 0.27 11.0 0.0 1.9 1 1 0 1 1 1 0 Formyl transferase HTH_7 PF02796.15 AID34993.1 - 0.14 12.2 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase MerR PF00376.23 AID34993.1 - 0.35 10.7 2.2 0.43 10.4 0.1 2.2 2 0 0 2 2 2 0 MerR family regulatory protein FA_desaturase PF00487.24 AID34994.1 - 4.8e-37 128.2 18.4 7.8e-37 127.5 18.4 1.3 1 0 0 1 1 1 1 Fatty acid desaturase Rieske PF00355.26 AID34995.1 - 1e-18 67.0 0.1 1.2e-18 66.8 0.1 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 AID34995.1 - 1.1e-10 41.4 0.0 1.2e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 AID34996.1 - 2e-61 207.8 0.2 2.4e-61 207.5 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 AID34996.1 - 1.8e-20 73.3 0.0 5.3e-20 71.8 0.0 1.9 1 0 0 1 1 1 1 Reductase C-terminal Pyr_redox PF00070.27 AID34996.1 - 9.9e-20 70.9 0.7 1.7e-16 60.6 0.5 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 AID34996.1 - 7.4e-06 26.1 2.4 0.00017 21.7 0.3 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 AID34996.1 - 9.6e-06 25.1 0.1 0.0037 16.6 0.0 2.2 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 AID34996.1 - 7.5e-05 22.0 3.3 0.064 12.3 0.0 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 AID34996.1 - 0.0021 17.4 0.4 0.0021 17.4 0.4 2.4 3 0 0 3 3 2 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 AID34996.1 - 0.0021 17.2 4.7 0.088 11.8 1.0 3.0 2 1 1 3 3 3 1 Lycopene cyclase protein TrkA_N PF02254.18 AID34996.1 - 0.005 17.1 2.4 0.37 11.1 0.5 2.7 2 1 0 2 2 2 1 TrkA-N domain XdhC_C PF13478.6 AID34996.1 - 0.0076 16.8 0.4 0.18 12.3 0.2 2.3 2 0 0 2 2 2 1 XdhC Rossmann domain 2-Hacid_dh_C PF02826.19 AID34996.1 - 0.015 14.7 0.1 0.25 10.7 0.0 2.2 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAO PF01266.24 AID34996.1 - 0.033 13.8 11.0 0.036 13.7 5.1 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 AID34996.1 - 0.034 14.0 2.4 0.055 13.3 0.7 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 AID34996.1 - 0.042 14.3 0.3 2 8.9 0.2 2.4 2 0 0 2 2 2 0 Putative NAD(P)-binding DFP PF04127.15 AID34996.1 - 0.056 13.3 0.3 0.3 10.9 0.3 2.0 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein ApbA PF02558.16 AID34996.1 - 0.059 13.0 1.6 2.9 7.5 0.0 2.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 AID34996.1 - 0.082 11.6 8.8 0.23 10.1 1.1 3.2 4 0 0 4 4 4 0 HI0933-like protein FAD_binding_3 PF01494.19 AID34996.1 - 0.53 9.5 4.9 1.7 7.8 0.6 2.2 2 0 0 2 2 2 0 FAD binding domain UDPG_MGDP_dh_N PF03721.14 AID34996.1 - 1.1 8.8 3.6 0.44 10.1 0.1 1.9 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_2 PF00890.24 AID34996.1 - 1.6 7.7 12.2 1.1 8.3 2.3 3.0 3 0 0 3 3 3 0 FAD binding domain NAD_binding_9 PF13454.6 AID34996.1 - 2 8.4 6.3 11 6.0 0.0 3.4 3 1 1 4 4 4 0 FAD-NAD(P)-binding Pantoate_transf PF02548.15 AID34997.1 - 6.3e-41 140.5 0.3 8e-40 136.9 0.1 1.9 2 0 0 2 2 2 1 Ketopantoate hydroxymethyltransferase NanE PF04131.14 AID34997.1 - 0.014 14.6 0.5 0.056 12.6 0.0 2.1 3 0 0 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase Formyl_trans_N PF00551.19 AID34998.1 - 6.5e-32 110.7 0.0 8.6e-32 110.3 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase ACT PF01842.25 AID34998.1 - 3.6e-05 23.4 0.0 0.00011 21.9 0.0 1.9 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 AID34998.1 - 0.00062 19.7 0.0 0.0014 18.6 0.0 1.7 1 0 0 1 1 1 1 ACT domain THF_DHG_CYH_C PF02882.19 AID34999.1 - 3.7e-66 221.4 0.6 6.5e-66 220.6 0.6 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 AID34999.1 - 1.6e-37 128.3 0.0 2.2e-37 127.9 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HTH_6 PF01418.17 AID35000.1 - 9.9e-08 31.9 0.1 1.3e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family Ifi-6-16 PF06140.13 AID35000.1 - 0.083 12.8 0.0 0.12 12.3 0.0 1.3 1 1 0 1 1 1 0 Interferon-induced 6-16 family IstB_IS21 PF01695.17 AID35001.1 - 3.5e-57 193.0 0.1 4.5e-57 192.6 0.1 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 AID35001.1 - 3.7e-09 36.7 0.0 5.8e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein PhoH PF02562.16 AID35001.1 - 2.5e-06 27.1 0.0 5.4e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 AID35001.1 - 6.1e-05 22.8 0.1 0.00019 21.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 AID35001.1 - 0.00042 20.7 0.0 0.0008 19.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 AID35001.1 - 0.0017 18.7 0.1 0.044 14.1 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.6 AID35001.1 - 0.0019 18.6 0.6 0.011 16.1 0.5 2.1 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.6 AID35001.1 - 0.003 17.8 0.6 0.019 15.2 0.7 2.2 2 1 1 3 3 2 1 AAA domain AAA_16 PF13191.6 AID35001.1 - 0.0042 17.5 0.1 0.0086 16.5 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 AID35001.1 - 0.0088 15.4 0.3 0.22 10.9 0.1 2.4 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI DUF2075 PF09848.9 AID35001.1 - 0.014 14.6 0.1 0.021 14.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.26 AID35001.1 - 0.022 14.5 0.1 0.13 11.9 0.1 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain KTI12 PF08433.10 AID35001.1 - 0.024 14.1 0.0 0.072 12.5 0.0 1.7 1 1 0 1 1 1 0 Chromatin associated protein KTI12 FtsK_SpoIIIE PF01580.18 AID35001.1 - 0.024 14.0 0.0 0.038 13.4 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 AID35001.1 - 0.039 13.5 0.0 0.076 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF815 PF05673.13 AID35001.1 - 0.042 13.0 0.0 0.058 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_5 PF07728.14 AID35001.1 - 0.049 13.6 0.3 0.19 11.7 0.3 2.1 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) MCM PF00493.23 AID35001.1 - 0.06 12.4 0.0 0.8 8.8 0.0 2.1 2 0 0 2 2 2 0 MCM P-loop domain TsaE PF02367.17 AID35001.1 - 0.061 13.3 0.0 0.13 12.2 0.0 1.7 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 AID35001.1 - 0.07 12.8 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 AID35001.1 - 0.077 12.8 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 AID35001.1 - 0.095 12.0 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin ResIII PF04851.15 AID35001.1 - 0.1 12.6 0.0 0.26 11.3 0.0 1.6 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit DnaB_C PF03796.15 AID35001.1 - 0.14 11.4 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain MobB PF03205.14 AID35001.1 - 0.16 11.9 0.2 4.3 7.3 0.0 2.7 2 1 1 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B rve PF00665.26 AID35002.1 - 5.6e-17 62.0 0.1 1.2e-16 60.9 0.1 1.6 1 0 0 1 1 1 1 Integrase core domain DAO PF01266.24 AID35003.1 - 5.8e-06 26.1 0.3 6.9e-06 25.9 0.3 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Ribonuc_L-PSP PF01042.21 AID35004.1 - 1.2e-20 73.7 0.2 1.5e-20 73.4 0.2 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP GST_C_2 PF13410.6 AID35004.1 - 0.042 13.9 0.7 0.36 10.9 0.7 2.0 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain IstB_IS21 PF01695.17 AID35008.1 - 3.6e-69 232.0 0.1 4.5e-69 231.7 0.1 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein IstB_IS21_ATP PF08483.11 AID35008.1 - 1.7e-05 24.6 2.7 3.4e-05 23.6 2.7 1.5 1 0 0 1 1 1 1 IstB-like ATP binding N-terminal AAA_25 PF13481.6 AID35008.1 - 8.2e-05 22.3 0.1 0.00019 21.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 AID35008.1 - 9.3e-05 22.9 0.3 0.00028 21.3 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 AID35008.1 - 0.0002 21.6 0.0 0.00051 20.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 AID35008.1 - 0.0013 18.2 0.0 0.003 17.0 0.0 1.6 1 0 0 1 1 1 1 PhoH-like protein AAA_18 PF13238.6 AID35008.1 - 0.0049 17.4 0.1 0.011 16.3 0.0 1.6 2 0 0 2 2 1 1 AAA domain Bac_DnaA PF00308.18 AID35008.1 - 0.0064 16.4 0.0 0.0092 15.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein Sigma54_activ_2 PF14532.6 AID35008.1 - 0.04 14.0 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_5 PF07728.14 AID35008.1 - 0.043 13.8 0.0 0.083 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 AID35008.1 - 0.046 13.1 0.0 0.075 12.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 AID35008.1 - 0.047 13.6 0.2 0.11 12.4 0.1 1.7 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 AID35008.1 - 0.15 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 AID35008.1 - 0.16 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_29 PF13555.6 AID35008.1 - 0.17 11.7 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain rve PF00665.26 AID35009.1 - 7e-16 58.5 0.0 1.7e-15 57.3 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_23 PF13384.6 AID35009.1 - 7.3e-05 22.4 4.5 0.0034 17.1 0.5 3.5 3 0 0 3 3 3 1 Homeodomain-like domain HTH_29 PF13551.6 AID35009.1 - 0.00016 21.6 2.1 0.0012 18.8 0.0 3.1 3 0 0 3 3 3 1 Winged helix-turn helix GerE PF00196.19 AID35009.1 - 0.00045 19.7 0.4 0.0016 17.9 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 AID35009.1 - 0.001 18.7 1.7 0.0016 18.1 0.3 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_28 PF13518.6 AID35009.1 - 0.0013 18.8 3.8 0.024 14.8 0.1 3.4 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_7 PF02796.15 AID35009.1 - 0.0065 16.5 0.7 0.032 14.3 0.2 2.4 3 0 0 3 3 3 1 Helix-turn-helix domain of resolvase HTH_10 PF04967.12 AID35009.1 - 0.011 15.5 0.1 0.047 13.5 0.1 2.1 2 0 0 2 2 2 0 HTH DNA binding domain HTH_24 PF13412.6 AID35009.1 - 0.032 13.8 0.3 0.11 12.1 0.2 1.9 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding CENP-B_N PF04218.13 AID35009.1 - 0.07 12.8 0.1 0.69 9.6 0.1 2.3 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain MarR_2 PF12802.7 AID35009.1 - 0.18 11.7 3.0 0.18 11.7 1.0 2.2 2 1 0 2 2 2 0 MarR family Prok-E2_A PF14457.6 AID35010.1 - 0.015 14.9 0.2 0.019 14.6 0.2 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family A SMODS PF18144.1 AID35011.1 - 2.5e-15 57.0 0.0 4.3e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DUF3198 PF11433.8 AID35011.1 - 0.00041 20.2 0.5 0.57 10.1 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3198) POX PF07526.11 AID35011.1 - 0.054 14.1 0.0 0.1 13.2 0.0 1.3 1 0 0 1 1 1 0 Associated with HOX Patatin PF01734.22 AID35012.1 - 1e-15 58.4 0.1 1.8e-15 57.7 0.1 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase Patatin PF01734.22 AID35013.1 - 7.5e-19 68.7 0.4 1.3e-18 67.9 0.4 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase HTH_3 PF01381.22 AID35014.1 - 7.7e-08 32.3 0.0 1.4e-07 31.4 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 AID35014.1 - 4.9e-05 23.3 0.0 0.00012 22.0 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 AID35014.1 - 0.00076 19.8 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Peptidase_M78 PF06114.13 AID35016.1 - 7e-11 42.1 0.0 1.1e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 IrrE N-terminal-like domain SMC_ScpB PF04079.16 AID35017.1 - 4.9e-36 123.8 0.0 5.9e-36 123.5 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB MarR PF01047.22 AID35017.1 - 0.022 14.7 0.1 0.24 11.4 0.0 2.3 2 0 0 2 2 2 0 MarR family DUF1403 PF07183.11 AID35018.1 - 1.9e-107 359.5 32.5 2.3e-107 359.2 32.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1403) Phage_integrase PF00589.22 AID35019.1 - 1.8e-13 50.6 0.0 3.7e-13 49.6 0.0 1.5 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 AID35019.1 - 0.0005 20.3 0.0 0.0026 18.0 0.0 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain RES PF08808.11 AID35020.1 - 4.6e-20 72.1 0.1 6.3e-20 71.7 0.1 1.1 1 0 0 1 1 1 1 RES domain DUF2384 PF09722.10 AID35021.1 - 9.7e-06 25.5 2.6 1.5e-05 24.9 0.4 2.3 2 1 1 3 3 3 1 Protein of unknown function (DUF2384) Phage_terminase PF10668.9 AID35021.1 - 0.00029 20.8 0.0 0.00056 19.9 0.0 1.4 1 0 0 1 1 1 1 Phage terminase small subunit LacI PF00356.21 AID35021.1 - 0.00031 20.5 0.5 0.0031 17.2 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_31 PF13560.6 AID35021.1 - 0.0025 18.1 0.0 0.0048 17.2 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 AID35021.1 - 0.005 16.8 0.0 0.0088 15.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 AID35021.1 - 0.011 15.5 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain MarR_2 PF12802.7 AID35021.1 - 0.034 14.0 0.0 0.087 12.7 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_DeoR PF08220.12 AID35021.1 - 0.041 13.6 0.0 0.22 11.3 0.0 2.0 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 AID35021.1 - 0.054 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_3 PF01381.22 AID35021.1 - 0.073 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_24 PF13412.6 AID35021.1 - 0.074 12.6 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mesorhizobium_huakuii_7653R-ASM70939v1/GCA_000709395.1_ASM70939v1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mesorhizobium_huakuii_7653R-ASM70939v1/GCA_000709395.1_ASM70939v1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mesorhizobium_huakuii_7653R-ASM70939v1/GCA_000709395.1_ASM70939v1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Mesorhizobium_huakuii_7653R-ASM70939v1/GCA_000709395.1_ASM70939v1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 03:26:30 2019 # [ok]