# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GIDA PF01134.22 gi|33151283|ref|NP_872636.1| - 3.2e-165 550.0 0.0 4.6e-165 549.5 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 gi|33151283|ref|NP_872636.1| - 3.6e-75 252.8 0.4 5.5e-75 252.1 0.4 1.3 1 0 0 1 1 1 1 GidA associated domain FAD_oxidored PF12831.7 gi|33151283|ref|NP_872636.1| - 3.8e-07 29.8 3.1 7.2e-07 28.9 3.1 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|33151283|ref|NP_872636.1| - 1.2e-06 28.0 0.4 2.6e-06 26.9 0.4 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|33151283|ref|NP_872636.1| - 8.5e-06 25.1 3.5 0.00031 19.9 0.5 2.6 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_3 PF13738.6 gi|33151283|ref|NP_872636.1| - 0.0021 17.3 0.1 1.8 7.8 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|33151283|ref|NP_872636.1| - 0.0031 16.3 2.3 0.096 11.4 0.1 2.9 3 0 0 3 3 3 1 HI0933-like protein DAO PF01266.24 gi|33151283|ref|NP_872636.1| - 0.0059 16.2 1.0 0.44 10.1 0.1 2.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|33151283|ref|NP_872636.1| - 0.021 14.1 0.0 0.049 12.9 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|33151283|ref|NP_872636.1| - 0.047 12.9 0.8 0.16 11.1 0.8 1.8 1 1 0 1 1 1 0 Thi4 family Pyr_redox PF00070.27 gi|33151283|ref|NP_872636.1| - 0.067 13.8 0.7 0.36 11.4 0.2 2.5 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|33151283|ref|NP_872636.1| - 0.095 12.7 0.2 0.095 12.7 0.2 1.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding MarR_2 PF12802.7 gi|33151283|ref|NP_872636.1| - 0.11 12.3 0.1 0.59 10.1 0.0 2.2 2 0 0 2 2 2 0 MarR family GidB PF02527.15 gi|33151284|ref|NP_872637.1| - 2e-57 193.5 0.0 2.5e-57 193.2 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_31 PF13847.6 gi|33151284|ref|NP_872637.1| - 4.7e-05 23.2 0.0 6.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|33151284|ref|NP_872637.1| - 0.011 15.3 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|33151284|ref|NP_872637.1| - 0.024 15.3 0.0 0.041 14.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|33151284|ref|NP_872637.1| - 0.08 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase ATP-synt_I PF03899.15 gi|33151285|ref|NP_872638.1| - 1.9e-17 63.4 9.4 2.5e-17 63.1 9.4 1.2 1 0 0 1 1 1 1 ATP synthase I chain ATP-synt_A PF00119.20 gi|33151286|ref|NP_872639.1| - 7.7e-56 189.4 23.6 9.5e-56 189.1 23.6 1.1 1 0 0 1 1 1 1 ATP synthase A chain ATP-synt_C PF00137.21 gi|33151287|ref|NP_872640.1| - 3.4e-09 36.9 8.8 4.5e-09 36.5 8.8 1.1 1 0 0 1 1 1 1 ATP synthase subunit C Borrelia_P13 PF05628.12 gi|33151287|ref|NP_872640.1| - 0.013 15.5 1.5 0.014 15.4 1.5 1.0 1 0 0 1 1 1 0 Borrelia membrane protein P13 EpuA PF11772.8 gi|33151287|ref|NP_872640.1| - 0.038 13.7 1.3 0.1 12.3 1.3 1.8 1 0 0 1 1 1 0 DNA-directed RNA polymerase subunit beta ATP-synt_B PF00430.18 gi|33151288|ref|NP_872641.1| - 5.1e-34 117.2 17.0 5.9e-34 117.0 17.0 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) UPF0242 PF06785.11 gi|33151288|ref|NP_872641.1| - 0.011 15.8 4.7 0.015 15.4 4.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus YMF19 PF02326.15 gi|33151288|ref|NP_872641.1| - 0.032 15.0 0.1 0.11 13.3 0.0 1.8 1 1 1 2 2 2 0 Plant ATP synthase F0 Gluconate_2-dh3 PF13618.6 gi|33151288|ref|NP_872641.1| - 0.32 11.2 5.1 0.48 10.7 5.0 1.3 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF2072 PF09845.9 gi|33151288|ref|NP_872641.1| - 0.95 9.7 6.4 1.3 9.3 6.4 1.2 1 0 0 1 1 1 0 Zn-ribbon containing protein Cdh1_DBD_1 PF18196.1 gi|33151288|ref|NP_872641.1| - 9.1 6.6 12.4 1.3 9.3 4.5 2.2 1 1 1 2 2 2 0 Chromodomain helicase DNA-binding domain 1 OSCP PF00213.18 gi|33151289|ref|NP_872642.1| - 1.2e-49 168.8 2.7 1.3e-49 168.6 2.7 1.0 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit DUF5398 PF17376.2 gi|33151289|ref|NP_872642.1| - 0.061 13.9 0.2 2 9.1 0.0 2.6 1 1 1 2 2 2 0 Family of unknown function (DUF5398) PGP_phosphatase PF09419.10 gi|33151289|ref|NP_872642.1| - 0.11 12.1 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase ATP-synt_ab PF00006.25 gi|33151290|ref|NP_872643.1| - 2.6e-72 242.9 0.1 4.1e-72 242.3 0.1 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 gi|33151290|ref|NP_872643.1| - 4e-45 153.2 1.6 6.7e-45 152.5 1.6 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 gi|33151290|ref|NP_872643.1| - 9.3e-15 54.9 0.3 2.1e-14 53.8 0.3 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|33151290|ref|NP_872643.1| - 0.0002 21.4 0.5 0.0005 20.2 0.1 1.9 2 0 0 2 2 2 1 HAS barrel domain ATPase_2 PF01637.18 gi|33151290|ref|NP_872643.1| - 0.16 11.8 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ATP-synt PF00231.19 gi|33151291|ref|NP_872644.1| - 1e-93 314.1 0.7 1.2e-93 313.9 0.7 1.0 1 0 0 1 1 1 1 ATP synthase ATP-synt_ab PF00006.25 gi|33151292|ref|NP_872645.1| - 1.2e-62 211.3 0.0 1.7e-62 210.8 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|33151292|ref|NP_872645.1| - 2.4e-20 72.8 0.9 5.6e-20 71.6 0.9 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 gi|33151292|ref|NP_872645.1| - 0.089 12.7 0.1 0.42 10.5 0.1 2.0 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain ATP-synt_DE_N PF02823.16 gi|33151293|ref|NP_872646.1| - 1e-29 102.2 0.2 1.5e-29 101.8 0.2 1.2 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Phage_integrase PF00589.22 gi|33151294|ref|NP_872647.1| - 8.5e-55 185.2 0.0 1.1e-54 184.8 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|33151294|ref|NP_872647.1| - 1.8e-22 79.4 2.0 3.6e-22 78.4 0.6 2.1 2 1 1 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|33151294|ref|NP_872647.1| - 6e-05 23.4 2.1 9.1e-05 22.9 0.2 2.2 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 gi|33151294|ref|NP_872647.1| - 0.055 13.6 0.0 0.089 12.9 0.0 1.3 1 0 0 1 1 1 0 Integrase Synaptobrevin PF00957.21 gi|33151294|ref|NP_872647.1| - 0.18 11.6 0.0 0.3 10.9 0.0 1.3 1 0 0 1 1 1 0 Synaptobrevin ATP_bind_3 PF01171.20 gi|33151295|ref|NP_872648.1| - 3.2e-58 196.5 0.3 5.8e-58 195.6 0.3 1.4 1 0 0 1 1 1 1 PP-loop family TilS PF09179.11 gi|33151295|ref|NP_872648.1| - 6e-16 58.7 0.2 6e-16 58.7 0.2 2.4 2 0 0 2 2 2 1 TilS substrate binding domain PAPS_reduct PF01507.19 gi|33151295|ref|NP_872648.1| - 9.1e-10 38.8 0.2 1.1e-08 35.4 0.0 2.2 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family TilS_C PF11734.8 gi|33151295|ref|NP_872648.1| - 4e-08 32.6 0.1 9e-08 31.4 0.1 1.6 1 0 0 1 1 1 1 TilS substrate C-terminal domain ThiI PF02568.14 gi|33151295|ref|NP_872648.1| - 0.00021 20.9 0.0 0.033 13.8 0.0 2.4 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|33151295|ref|NP_872648.1| - 0.0031 17.0 0.0 1.1 8.8 0.0 2.4 1 1 1 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|33151295|ref|NP_872648.1| - 0.023 13.5 0.0 1.4 7.6 0.0 2.3 2 0 0 2 2 2 0 tRNA methyl transferase Abhydro_lipase PF04083.16 gi|33151295|ref|NP_872648.1| - 0.026 14.1 0.0 0.058 13.0 0.0 1.6 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region Asn_synthase PF00733.21 gi|33151295|ref|NP_872648.1| - 0.28 10.8 2.5 0.3 10.7 0.0 2.3 3 1 0 3 3 3 0 Asparagine synthase PmbA_TldD PF01523.16 gi|33151296|ref|NP_872649.1| - 7.1e-66 222.9 0.0 9.5e-66 222.5 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PrmA PF06325.13 gi|33151297|ref|NP_872650.1| - 2.5e-105 352.1 0.0 2.7e-105 352.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|33151297|ref|NP_872650.1| - 7.6e-10 38.6 0.1 1.2e-09 37.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|33151297|ref|NP_872650.1| - 7e-09 35.7 0.1 1.3e-08 34.7 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33151297|ref|NP_872650.1| - 4.7e-08 33.6 0.0 1.3e-07 32.3 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33151297|ref|NP_872650.1| - 7.4e-08 32.4 0.0 1.4e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33151297|ref|NP_872650.1| - 2.6e-06 28.1 0.0 5.4e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|33151297|ref|NP_872650.1| - 1.7e-05 24.6 0.0 2.8e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|33151297|ref|NP_872650.1| - 3.2e-05 24.5 0.0 8.1e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|33151297|ref|NP_872650.1| - 0.00046 20.2 0.0 0.00074 19.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|33151297|ref|NP_872650.1| - 0.00066 18.7 0.0 0.0011 18.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PCMT PF01135.19 gi|33151297|ref|NP_872650.1| - 0.0017 18.2 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Met_10 PF02475.16 gi|33151297|ref|NP_872650.1| - 0.0022 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein N6_N4_Mtase PF01555.18 gi|33151297|ref|NP_872650.1| - 0.0022 17.7 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 DNA methylase Methyltransf_15 PF09445.10 gi|33151297|ref|NP_872650.1| - 0.0029 17.2 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|33151297|ref|NP_872650.1| - 0.0056 16.7 0.0 0.0094 15.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|33151297|ref|NP_872650.1| - 0.11 11.7 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|33151297|ref|NP_872650.1| - 0.37 10.5 1.9 1.7 8.3 1.9 1.9 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 MFS_1 PF07690.16 gi|33151299|ref|NP_872652.1| - 9.4e-14 51.1 35.2 1.1e-13 50.8 35.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UPF0565 PF10561.9 gi|33151299|ref|NP_872652.1| - 0.13 11.4 0.3 0.19 10.9 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 CRCB PF02537.15 gi|33151300|ref|NP_872653.1| - 6.3e-21 74.5 10.4 7.7e-21 74.2 10.4 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Colicin_V PF02674.16 gi|33151300|ref|NP_872653.1| - 0.14 12.1 12.6 0.017 15.1 7.0 1.8 1 1 1 2 2 2 0 Colicin V production protein DcuA_DcuB PF03605.14 gi|33151301|ref|NP_872654.1| - 8e-155 515.3 23.1 9.7e-155 515.0 23.1 1.0 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter DcuC PF03606.15 gi|33151301|ref|NP_872654.1| - 2.3e-07 29.7 27.5 1.4e-06 27.1 25.0 3.5 1 1 1 2 2 2 1 C4-dicarboxylate anaerobic carrier YpmT PF17431.2 gi|33151301|ref|NP_872654.1| - 0.12 12.4 0.4 0.68 10.0 0.4 2.3 1 0 0 1 1 1 0 Uncharacterized YmpT-like DAP_epimerase PF01678.19 gi|33151302|ref|NP_872655.1| - 2.8e-66 221.2 0.4 2.9e-32 111.4 0.0 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.16 gi|33151302|ref|NP_872655.1| - 0.00098 18.7 0.0 0.001 18.6 0.0 1.1 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein tRNA-synt_2 PF00152.20 gi|33151303|ref|NP_872656.1| - 4.2e-45 154.2 0.6 8.1e-45 153.2 0.6 1.4 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|33151303|ref|NP_872656.1| - 0.0011 18.5 0.2 0.3 10.5 0.1 2.9 2 1 0 2 2 2 2 tRNA synthetases class II core domain (F) DUF1978 PF09321.10 gi|33151303|ref|NP_872656.1| - 0.092 12.1 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) TsaE PF02367.17 gi|33151303|ref|NP_872656.1| - 0.14 12.1 0.1 0.46 10.5 0.1 1.8 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE FAD_binding_2 PF00890.24 gi|33151304|ref|NP_872657.1| - 4.2e-111 372.0 0.6 5.9e-111 371.5 0.6 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|33151304|ref|NP_872657.1| - 4.7e-40 136.5 0.2 4.7e-40 136.5 0.2 1.6 2 0 0 2 2 2 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|33151304|ref|NP_872657.1| - 6.4e-11 42.0 0.1 5e-05 22.7 0.1 3.1 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|33151304|ref|NP_872657.1| - 0.00031 20.1 2.1 0.00064 19.0 0.2 2.4 3 0 0 3 3 3 1 Thi4 family Myb_DNA-bind_4 PF13837.6 gi|33151304|ref|NP_872657.1| - 0.068 13.6 0.2 0.14 12.5 0.2 1.5 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain DAO PF01266.24 gi|33151304|ref|NP_872657.1| - 0.093 12.3 0.4 1.4 8.4 0.0 2.4 2 1 0 2 2 2 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|33151304|ref|NP_872657.1| - 0.095 11.7 0.2 0.2 10.6 0.2 1.5 1 0 0 1 1 1 0 Lycopene cyclase protein GFO_IDH_MocA PF01408.22 gi|33151304|ref|NP_872657.1| - 0.1 13.5 0.4 0.38 11.6 0.1 2.1 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold GIDA PF01134.22 gi|33151304|ref|NP_872657.1| - 0.16 11.0 7.1 0.4 9.7 0.4 3.0 4 0 0 4 4 4 0 Glucose inhibited division protein A HI0933_like PF03486.14 gi|33151304|ref|NP_872657.1| - 0.34 9.6 4.9 0.28 9.9 1.6 2.4 2 1 0 2 2 2 0 HI0933-like protein Fer2_3 PF13085.6 gi|33151305|ref|NP_872658.1| - 3.4e-33 113.9 0.0 6.3e-33 113.1 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|33151305|ref|NP_872658.1| - 4.2e-12 46.3 3.4 7.5e-12 45.5 1.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151305|ref|NP_872658.1| - 2.2e-10 40.5 1.2 2.2e-10 40.5 1.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151305|ref|NP_872658.1| - 2.3e-08 34.5 11.6 1.1e-06 29.0 3.0 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33151305|ref|NP_872658.1| - 4.7e-07 29.9 5.0 0.0013 18.8 0.3 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|33151305|ref|NP_872658.1| - 8.8e-06 26.2 15.4 5.7e-05 23.6 5.6 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151305|ref|NP_872658.1| - 1.9e-05 25.5 3.2 2.6e-05 25.1 0.9 2.3 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|33151305|ref|NP_872658.1| - 6.7e-05 22.5 0.9 6.7e-05 22.5 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|33151305|ref|NP_872658.1| - 0.00016 21.9 0.6 0.74 10.0 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|33151305|ref|NP_872658.1| - 0.0011 19.3 1.4 0.0011 19.3 1.4 2.7 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|33151305|ref|NP_872658.1| - 0.0015 18.5 1.7 0.0015 18.5 1.7 3.5 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33151305|ref|NP_872658.1| - 0.0018 18.3 2.0 0.0018 18.3 2.0 2.9 3 0 0 3 3 2 1 4Fe-4S binding domain Fer2 PF00111.27 gi|33151305|ref|NP_872658.1| - 0.0028 17.6 0.0 0.0028 17.6 0.0 1.8 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_21 PF14697.6 gi|33151305|ref|NP_872658.1| - 0.0041 17.2 0.4 0.0041 17.2 0.4 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|33151305|ref|NP_872658.1| - 0.062 13.9 1.2 0.062 13.9 1.2 2.9 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|33151305|ref|NP_872658.1| - 0.11 13.5 3.7 0.11 13.5 3.7 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|33151305|ref|NP_872658.1| - 0.15 12.8 2.3 4.1 8.2 0.2 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|33151305|ref|NP_872658.1| - 1.6 9.6 10.3 0.86 10.5 0.3 2.6 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fumarate_red_C PF02300.17 gi|33151306|ref|NP_872659.1| - 4.4e-47 159.3 6.9 4.9e-47 159.2 6.9 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit C Fumarate_red_D PF02313.17 gi|33151307|ref|NP_872660.1| - 9.3e-42 141.7 7.7 1.1e-41 141.6 7.7 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit D LPAM_2 PF13627.6 gi|33151308|ref|NP_872661.1| - 0.00014 21.6 2.3 0.00019 21.2 2.3 1.3 1 1 0 1 1 1 1 Prokaryotic lipoprotein-attachment site LPAM_1 PF08139.12 gi|33151308|ref|NP_872661.1| - 0.13 12.8 4.1 0.23 12.0 4.1 1.5 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Orn_Arg_deC_N PF02784.16 gi|33151309|ref|NP_872662.1| - 4.9e-77 258.6 0.0 6.2e-77 258.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|33151309|ref|NP_872662.1| - 2.2e-26 91.9 0.0 3.3e-26 91.4 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 gi|33151309|ref|NP_872662.1| - 6.9e-06 25.9 0.0 1.3e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain ChuX_HutX PF06228.13 gi|33151310|ref|NP_872663.1| - 2.3e-30 105.1 0.1 5.6e-30 103.8 0.1 1.7 1 0 0 1 1 1 1 Haem utilisation ChuX/HutX Radical_SAM PF04055.21 gi|33151310|ref|NP_872663.1| - 5.3e-21 75.7 0.0 2.6e-19 70.2 0.1 2.5 2 0 0 2 2 2 1 Radical SAM superfamily HemS PF05171.12 gi|33151310|ref|NP_872663.1| - 1.8e-05 24.7 0.0 4.2e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Haemin-degrading HemS.ChuX domain Fer4_12 PF13353.6 gi|33151310|ref|NP_872663.1| - 0.0003 21.1 0.1 0.00085 19.6 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain NAD_binding_10 PF13460.6 gi|33151311|ref|NP_872664.1| - 2.8e-29 102.3 0.0 3.3e-29 102.1 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|33151311|ref|NP_872664.1| - 4.1e-07 29.7 0.0 1.5e-06 27.9 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|33151311|ref|NP_872664.1| - 0.0021 17.2 0.0 0.032 13.3 0.0 2.1 2 0 0 2 2 2 1 RmlD substrate binding domain NmrA PF05368.13 gi|33151311|ref|NP_872664.1| - 0.006 16.2 0.0 0.0085 15.7 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family MnmE_helical PF12631.7 gi|33151312|ref|NP_872665.1| - 2.1e-58 197.9 3.0 2.9e-58 197.5 3.0 1.2 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 gi|33151312|ref|NP_872665.1| - 4.1e-35 120.6 0.0 1.7e-34 118.6 0.0 2.1 2 0 0 2 2 2 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 gi|33151312|ref|NP_872665.1| - 1.5e-24 86.3 0.1 6.9e-24 84.1 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|33151312|ref|NP_872665.1| - 5.5e-09 35.7 0.0 1e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Ras PF00071.22 gi|33151312|ref|NP_872665.1| - 3.2e-06 26.9 0.0 7.9e-06 25.6 0.0 1.7 2 0 0 2 2 2 1 Ras family RsgA_GTPase PF03193.16 gi|33151312|ref|NP_872665.1| - 7.8e-05 22.6 0.0 0.0027 17.7 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase Roc PF08477.13 gi|33151312|ref|NP_872665.1| - 0.00013 22.2 0.0 0.00034 20.8 0.0 1.8 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AIG1 PF04548.16 gi|33151312|ref|NP_872665.1| - 0.00025 20.4 0.0 0.0005 19.5 0.0 1.5 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|33151312|ref|NP_872665.1| - 0.00037 20.6 0.0 0.0017 18.5 0.0 1.9 1 1 1 2 2 2 1 Dynamin family ABC_tran PF00005.27 gi|33151312|ref|NP_872665.1| - 0.0028 18.2 0.0 0.0079 16.7 0.0 1.8 1 0 0 1 1 1 1 ABC transporter Gtr1_RagA PF04670.12 gi|33151312|ref|NP_872665.1| - 0.0072 15.7 0.0 0.015 14.7 0.0 1.5 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Arf PF00025.21 gi|33151312|ref|NP_872665.1| - 0.025 14.1 0.0 0.054 12.9 0.0 1.5 1 1 0 1 1 1 0 ADP-ribosylation factor family DUF1383 PF07134.11 gi|33151312|ref|NP_872665.1| - 0.05 12.7 0.0 5.3 6.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1383) AAA_28 PF13521.6 gi|33151312|ref|NP_872665.1| - 0.074 13.3 0.1 0.32 11.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain YidC_periplas PF14849.6 gi|33151313|ref|NP_872666.1| - 5.7e-83 279.1 3.9 7.4e-83 278.7 3.9 1.1 1 0 0 1 1 1 1 YidC periplasmic domain 60KD_IMP PF02096.20 gi|33151313|ref|NP_872666.1| - 3.4e-63 212.5 10.6 6e-63 211.7 10.6 1.4 1 0 0 1 1 1 1 60Kd inner membrane protein FBA_3 PF08268.12 gi|33151313|ref|NP_872666.1| - 0.12 12.4 0.0 0.38 10.7 0.0 1.8 2 0 0 2 2 2 0 F-box associated domain 4HBT PF03061.22 gi|33151315|ref|NP_872668.1| - 1.4e-16 60.6 0.0 4.6e-16 58.9 0.0 1.7 2 0 0 2 2 2 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|33151315|ref|NP_872668.1| - 0.0002 21.7 0.0 0.00022 21.5 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily TBD PF12845.7 gi|33151315|ref|NP_872668.1| - 0.091 12.7 0.2 0.2 11.6 0.0 1.7 2 0 0 2 2 2 0 TBD domain ESR1_C PF12743.7 gi|33151316|ref|NP_872669.1| - 0.099 12.4 0.5 0.12 12.2 0.5 1.2 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal SHP PF03579.13 gi|33151316|ref|NP_872669.1| - 0.1 12.6 1.4 0.11 12.5 1.4 1.2 1 0 0 1 1 1 0 Small hydrophobic protein Med22 PF06179.12 gi|33151316|ref|NP_872669.1| - 0.16 12.2 0.1 0.17 12.1 0.1 1.0 1 0 0 1 1 1 0 Surfeit locus protein 5 subunit 22 of Mediator complex OmpA_membrane PF01389.17 gi|33151318|ref|NP_872671.1| - 1.5e-77 259.5 0.9 2.1e-77 259.0 0.9 1.2 1 0 0 1 1 1 1 OmpA-like transmembrane domain OMP_b-brl PF13505.6 gi|33151318|ref|NP_872671.1| - 2.2e-19 70.3 1.0 3.9e-19 69.5 1.0 1.4 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA PF00691.20 gi|33151318|ref|NP_872671.1| - 2.8e-17 62.9 0.1 4.8e-17 62.1 0.1 1.4 1 0 0 1 1 1 1 OmpA family Opacity PF02462.15 gi|33151318|ref|NP_872671.1| - 0.00062 19.9 0.2 0.015 15.4 0.0 2.5 2 0 0 2 2 2 1 Opacity family porin protein OMP_b-brl_2 PF13568.6 gi|33151318|ref|NP_872671.1| - 0.063 13.3 2.7 6.9 6.7 1.4 2.5 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 gi|33151319|ref|NP_872672.1| - 1.4e-74 249.8 5.4 2e-74 249.3 5.4 1.2 1 0 0 1 1 1 1 OmpA-like transmembrane domain OMP_b-brl PF13505.6 gi|33151319|ref|NP_872672.1| - 1.2e-18 67.8 4.7 2.2e-18 67.0 4.7 1.3 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA PF00691.20 gi|33151319|ref|NP_872672.1| - 1.3e-18 67.1 0.1 2.8e-18 66.1 0.1 1.6 1 0 0 1 1 1 1 OmpA family HNH_repeat PF18780.1 gi|33151320|ref|NP_872673.1| - 0.027 14.3 0.4 0.036 13.9 0.4 1.2 1 0 0 1 1 1 0 Homing endonuclease repeat Acyltransferase PF01553.21 gi|33151322|ref|NP_872675.1| - 4.1e-32 110.6 0.1 5.6e-32 110.2 0.1 1.2 1 0 0 1 1 1 1 Acyltransferase Osmo_CC PF08946.10 gi|33151322|ref|NP_872675.1| - 0.16 12.2 0.9 0.39 11.0 0.9 1.6 1 0 0 1 1 1 0 Osmosensory transporter coiled coil Cu-oxidase_3 PF07732.15 gi|33151323|ref|NP_872676.1| - 3.4e-23 81.9 0.1 6.3e-23 81.1 0.1 1.5 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|33151323|ref|NP_872676.1| - 6.5e-06 25.9 0.1 4.5e-05 23.2 0.0 2.3 3 0 0 3 3 3 1 Multicopper oxidase Cu-oxidase PF00394.22 gi|33151323|ref|NP_872676.1| - 1.6e-05 25.1 0.0 7.7e-05 22.9 0.0 2.1 3 0 0 3 3 3 1 Multicopper oxidase ACCA PF03255.14 gi|33151324|ref|NP_872677.1| - 2e-64 215.8 0.1 3.9e-64 214.9 0.1 1.5 1 0 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Carboxyl_trans PF01039.22 gi|33151324|ref|NP_872677.1| - 1.3e-19 70.2 0.1 1.6e-19 70.0 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|33151324|ref|NP_872677.1| - 0.0022 17.6 0.1 0.003 17.1 0.1 1.2 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) PM0188 PF11477.8 gi|33151326|ref|NP_872679.1| - 1.7e-194 646.3 22.5 2e-194 646.1 22.5 1.0 1 0 0 1 1 1 1 Sialyltransferase PMO188 NAD_synthase PF02540.17 gi|33151326|ref|NP_872679.1| - 0.0088 15.2 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 NAD synthase GTP_EFTU PF00009.27 gi|33151327|ref|NP_872680.1| - 1.6e-58 197.5 0.0 2.4e-58 196.9 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|33151327|ref|NP_872680.1| - 5.3e-34 116.9 0.0 1.1e-33 115.9 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|33151327|ref|NP_872680.1| - 3e-17 62.8 6.3 7e-17 61.6 6.3 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|33151327|ref|NP_872680.1| - 2.2e-05 24.5 0.0 4.5e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 gi|33151327|ref|NP_872680.1| - 0.039 13.5 0.2 0.09 12.4 0.0 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PRK PF00485.18 gi|33151329|ref|NP_872682.1| - 6.1e-15 55.5 0.0 1.2e-14 54.6 0.0 1.4 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family Redoxin PF08534.10 gi|33151330|ref|NP_872683.1| - 2.9e-20 72.5 0.0 3.6e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|33151330|ref|NP_872683.1| - 1.7e-15 57.1 0.0 2.1e-15 56.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|33151330|ref|NP_872683.1| - 0.00012 22.3 0.0 0.0002 21.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|33151330|ref|NP_872683.1| - 0.00013 22.3 0.0 0.00026 21.4 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|33151330|ref|NP_872683.1| - 0.0067 16.4 0.0 0.018 15.0 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin AhpC-TSA_2 PF13911.6 gi|33151330|ref|NP_872683.1| - 0.0082 16.3 0.0 0.015 15.4 0.0 1.5 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme Thioredoxin_7 PF13899.6 gi|33151330|ref|NP_872683.1| - 0.044 14.0 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like DUF929 PF06053.11 gi|33151330|ref|NP_872683.1| - 0.088 12.1 0.0 0.15 11.4 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF929) MoCF_biosynth PF00994.24 gi|33151331|ref|NP_872684.1| - 1.3e-27 96.2 0.0 1.7e-27 95.9 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain P-II PF00543.22 gi|33151332|ref|NP_872685.1| - 6.2e-45 152.0 2.2 7e-45 151.8 2.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Nit_Regul_Hom PF10126.9 gi|33151332|ref|NP_872685.1| - 0.0075 16.3 0.2 0.2 11.7 0.2 2.1 1 1 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII SPOUT_MTase_2 PF14419.6 gi|33151332|ref|NP_872685.1| - 0.047 13.1 0.1 0.13 11.6 0.0 1.7 1 1 1 2 2 2 0 AF2226-like SPOUT RNA Methylase fused to THUMP Peptidase_A8 PF01252.18 gi|33151333|ref|NP_872686.1| - 1.5e-38 132.2 6.8 1.7e-38 132.0 6.8 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II LYTB PF02401.18 gi|33151334|ref|NP_872687.1| - 1.8e-90 302.8 0.2 2e-90 302.6 0.2 1.0 1 0 0 1 1 1 1 LytB protein Gln-synt_C-ter PF18318.1 gi|33151334|ref|NP_872687.1| - 0.12 12.3 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase C-terminal domain Sdh5 PF03937.16 gi|33151335|ref|NP_872688.1| - 4.8e-22 77.7 0.1 5.5e-22 77.5 0.1 1.0 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase Patatin PF01734.22 gi|33151336|ref|NP_872689.1| - 8.3e-21 75.1 0.0 1.4e-20 74.4 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase PLA2_B PF01735.18 gi|33151336|ref|NP_872689.1| - 5e-05 21.9 1.0 0.00018 20.0 0.0 2.1 2 1 0 2 2 2 1 Lysophospholipase catalytic domain Methyltransf_4 PF02390.17 gi|33151336|ref|NP_872689.1| - 0.036 13.5 0.6 0.1 12.0 0.4 1.8 2 0 0 2 2 2 0 Putative methyltransferase Ferritin PF00210.24 gi|33151337|ref|NP_872690.1| - 1.7e-21 76.7 0.1 2.2e-21 76.3 0.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain FUSC-like PF12805.7 gi|33151338|ref|NP_872691.1| - 5.7e-96 320.9 17.5 5.7e-96 320.9 17.5 3.4 2 1 0 2 2 2 1 FUSC-like inner membrane protein yccS FUSC_2 PF13515.6 gi|33151338|ref|NP_872691.1| - 1.8e-23 83.0 8.6 1.8e-23 83.0 8.6 2.6 2 0 0 2 2 2 1 Fusaric acid resistance protein-like FUSC PF04632.12 gi|33151338|ref|NP_872691.1| - 0.00046 18.9 0.2 0.00046 18.9 0.2 3.9 2 2 2 4 4 4 1 Fusaric acid resistance protein family MbeB_N PF04837.12 gi|33151338|ref|NP_872691.1| - 4.7 7.6 6.2 4.1 7.8 0.2 3.0 3 0 0 3 3 3 0 MbeB-like, N-term conserved region DUF1240 PF06836.12 gi|33151339|ref|NP_872692.1| - 0.057 14.0 0.3 0.057 14.0 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1240) Fer4 PF00037.27 gi|33151340|ref|NP_872693.1| - 1.9e-14 52.8 25.1 8.5e-08 31.7 1.3 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|33151340|ref|NP_872693.1| - 3.6e-14 53.1 23.7 4.8e-09 36.7 3.8 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33151340|ref|NP_872693.1| - 1.2e-13 51.0 22.6 6.6e-07 29.4 10.6 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151340|ref|NP_872693.1| - 2.3e-07 31.6 28.9 0.00044 21.1 2.3 4.2 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|33151340|ref|NP_872693.1| - 4.2e-07 30.0 29.7 4.9e-06 26.6 3.7 2.9 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|33151340|ref|NP_872693.1| - 1e-06 28.5 13.9 4.2e-05 23.4 4.2 4.2 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|33151340|ref|NP_872693.1| - 3.8e-06 26.6 32.0 1.3e-05 25.0 1.8 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|33151340|ref|NP_872693.1| - 5.6e-05 23.5 29.0 0.017 15.6 3.0 4.1 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151340|ref|NP_872693.1| - 0.00024 21.2 36.6 0.0018 18.3 2.0 3.3 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|33151340|ref|NP_872693.1| - 0.0034 17.8 2.3 0.0034 17.8 2.3 4.2 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|33151340|ref|NP_872693.1| - 0.023 15.6 6.9 0.023 15.6 6.9 4.4 4 1 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|33151340|ref|NP_872693.1| - 0.076 13.8 0.6 0.076 13.8 0.6 3.6 3 1 1 4 4 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|33151340|ref|NP_872693.1| - 0.45 10.7 31.0 0.4 10.9 2.8 4.0 1 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151340|ref|NP_872693.1| - 3.2 8.4 35.6 0.24 12.0 3.1 4.2 1 1 5 6 6 5 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33151340|ref|NP_872693.1| - 9.2 7.2 28.5 13 6.7 1.7 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain NapD PF03927.13 gi|33151341|ref|NP_872694.1| - 4.3e-24 84.4 0.3 4.8e-24 84.2 0.3 1.0 1 0 0 1 1 1 1 NapD protein Molybdopterin PF00384.22 gi|33151342|ref|NP_872695.1| - 5e-85 286.0 0.0 1e-84 285.0 0.0 1.5 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|33151342|ref|NP_872695.1| - 6.7e-26 90.5 0.0 1.6e-25 89.3 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|33151342|ref|NP_872695.1| - 1.4e-17 63.4 0.3 3.1e-17 62.3 0.3 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain TAT_signal PF10518.9 gi|33151342|ref|NP_872695.1| - 8.3e-07 28.6 1.5 2.4e-06 27.1 1.5 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|33151342|ref|NP_872695.1| - 0.041 13.2 1.1 0.092 12.1 1.1 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Fer4_7 PF12838.7 gi|33151343|ref|NP_872696.1| - 3.1e-13 50.1 25.3 5e-07 30.2 9.5 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|33151343|ref|NP_872696.1| - 1.4e-11 43.7 29.4 2.4e-06 27.1 0.9 5.0 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|33151343|ref|NP_872696.1| - 1.3e-10 41.2 25.6 0.00018 21.6 8.8 3.8 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151343|ref|NP_872696.1| - 6.2e-10 39.9 20.9 0.0062 17.4 1.0 4.1 3 1 0 3 3 3 3 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|33151343|ref|NP_872696.1| - 1.5e-08 34.7 27.5 0.00098 19.2 12.2 3.5 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|33151343|ref|NP_872696.1| - 1.8e-08 34.1 33.4 0.00066 19.6 1.6 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_2 PF12797.7 gi|33151343|ref|NP_872696.1| - 4.2e-08 32.8 32.5 0.00043 20.2 2.4 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_4 PF12800.7 gi|33151343|ref|NP_872696.1| - 7e-08 32.4 30.7 0.0034 17.8 3.0 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|33151343|ref|NP_872696.1| - 1.8e-07 31.5 18.7 0.0056 17.1 0.2 3.5 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151343|ref|NP_872696.1| - 1.1e-06 29.0 20.9 0.0021 18.6 0.4 3.9 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|33151343|ref|NP_872696.1| - 6.4e-05 23.6 42.4 0.0094 16.8 5.5 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|33151343|ref|NP_872696.1| - 0.00014 22.0 26.1 0.032 14.4 10.1 3.5 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|33151343|ref|NP_872696.1| - 0.0013 18.8 10.2 0.097 12.8 7.5 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33151343|ref|NP_872696.1| - 0.019 15.8 2.1 0.019 15.8 2.1 3.7 3 1 1 4 4 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|33151343|ref|NP_872696.1| - 0.62 10.3 0.1 0.62 10.3 0.1 4.1 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|33151343|ref|NP_872696.1| - 1.3 8.9 21.7 0.61 9.9 4.5 3.3 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_5 PF12801.7 gi|33151344|ref|NP_872697.1| - 2.2e-12 46.7 14.8 1.5e-10 40.8 3.4 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33151344|ref|NP_872697.1| - 3.6e-08 33.2 20.2 2e-06 27.6 3.2 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|33151344|ref|NP_872697.1| - 5.9e-07 29.5 11.1 0.00053 20.1 1.5 2.6 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151344|ref|NP_872697.1| - 2.1e-06 27.8 8.7 2.1e-06 27.8 8.7 2.2 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|33151344|ref|NP_872697.1| - 3.4e-06 26.6 23.9 0.0053 16.5 3.5 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|33151344|ref|NP_872697.1| - 2.1e-05 25.0 21.6 5.5e-05 23.7 11.3 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|33151344|ref|NP_872697.1| - 4.3e-05 23.5 8.4 4.3e-05 23.5 8.4 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151344|ref|NP_872697.1| - 0.00012 23.0 12.2 0.026 15.4 0.5 3.7 4 0 0 4 4 4 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|33151344|ref|NP_872697.1| - 0.00083 19.3 20.8 0.0066 16.5 4.3 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|33151344|ref|NP_872697.1| - 0.13 12.8 19.7 0.21 12.2 3.0 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|33151344|ref|NP_872697.1| - 0.16 12.7 11.1 0.31 11.8 0.8 2.7 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|33151344|ref|NP_872697.1| - 1.3 9.6 19.0 0.37 11.3 13.4 2.7 3 1 1 4 4 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151344|ref|NP_872697.1| - 2.1 8.9 17.2 30 5.2 13.7 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33151344|ref|NP_872697.1| - 3.5 8.5 12.4 0.49 11.3 2.7 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|33151344|ref|NP_872697.1| - 9.6 6.8 22.5 0.54 10.8 4.1 3.2 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I NapB PF03892.14 gi|33151345|ref|NP_872698.1| - 1.1e-39 135.3 0.1 1.3e-39 135.1 0.1 1.0 1 0 0 1 1 1 1 Nitrate reductase cytochrome c-type subunit (NapB) Cytochrome_C7 PF14522.6 gi|33151345|ref|NP_872698.1| - 0.0026 17.7 0.4 0.0039 17.2 0.4 1.3 1 0 0 1 1 1 1 Cytochrome c7 and related cytochrome c DUF3365 PF11845.8 gi|33151345|ref|NP_872698.1| - 0.0047 17.3 0.4 3.2 8.0 0.0 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3365) Cytochrome_C554 PF13435.6 gi|33151345|ref|NP_872698.1| - 0.0068 17.3 1.2 1.7 9.6 0.2 2.2 1 1 1 2 2 2 2 Cytochrome c554 and c-prime Paired_CXXCH_1 PF09699.10 gi|33151345|ref|NP_872698.1| - 0.012 15.3 3.6 0.14 12.0 3.6 2.1 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_NNT PF03264.14 gi|33151345|ref|NP_872698.1| - 0.026 14.2 0.6 0.064 13.0 0.6 1.5 1 1 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region Cytochrome_P460 PF16694.5 gi|33151345|ref|NP_872698.1| - 0.026 14.9 0.6 8.2 6.8 0.1 2.2 2 0 0 2 2 2 0 Cytochrome P460 Cytochrom_c3_2 PF14537.6 gi|33151345|ref|NP_872698.1| - 0.049 14.1 1.0 0.18 12.3 1.0 1.8 1 1 0 1 1 1 0 Cytochrome c3 Cytochrome_CBB3 PF13442.6 gi|33151345|ref|NP_872698.1| - 0.3 11.4 1.9 4.7 7.6 0.3 2.3 1 1 1 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_CIII PF02085.16 gi|33151345|ref|NP_872698.1| - 0.42 11.0 2.5 6 7.3 0.2 2.1 1 1 1 2 2 2 0 Class III cytochrome C family Cytochrom_NNT PF03264.14 gi|33151346|ref|NP_872699.1| - 1.2e-69 233.5 13.0 1.4e-69 233.2 13.0 1.1 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Paired_CXXCH_1 PF09699.10 gi|33151346|ref|NP_872699.1| - 4.9e-09 35.8 8.9 0.0017 18.0 2.5 3.5 3 1 0 3 3 3 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 gi|33151346|ref|NP_872699.1| - 0.00017 21.5 24.8 0.0025 17.8 11.2 3.0 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Cytochrom_CIII PF02085.16 gi|33151346|ref|NP_872699.1| - 0.001 19.4 22.2 0.003 17.9 10.3 2.6 1 1 0 2 2 2 2 Class III cytochrome C family zinc-ribbon_6 PF10005.9 gi|33151346|ref|NP_872699.1| - 0.0014 19.2 7.6 0.19 12.4 0.0 3.3 3 1 0 3 3 3 1 zinc-ribbon domain Cytochrom_c3_2 PF14537.6 gi|33151346|ref|NP_872699.1| - 0.0019 18.6 23.3 0.085 13.3 10.9 2.7 1 1 0 2 2 2 2 Cytochrome c3 Cytochrome_CBB3 PF13442.6 gi|33151346|ref|NP_872699.1| - 0.0027 18.0 14.0 2.1 8.7 0.1 4.1 1 1 3 4 4 4 2 Cytochrome C oxidase, cbb3-type, subunit III zf-C4pol PF14260.6 gi|33151346|ref|NP_872699.1| - 0.23 11.9 12.5 5.5 7.5 5.5 3.0 1 1 1 2 2 2 0 C4-type zinc-finger of DNA polymerase delta zf-CHY PF05495.12 gi|33151346|ref|NP_872699.1| - 0.41 11.2 15.7 0.22 12.1 4.3 2.6 2 1 0 2 2 2 0 CHY zinc finger GF_recep_IV PF14843.6 gi|33151346|ref|NP_872699.1| - 1.1 9.0 12.4 0.086 12.6 2.8 2.6 2 1 1 3 3 3 0 Growth factor receptor domain IV Neuropep_like PF15161.6 gi|33151346|ref|NP_872699.1| - 2.5 7.8 15.8 0.56 9.9 0.9 3.9 3 1 1 4 4 4 0 Neuropeptide-like Cytochrome_C554 PF13435.6 gi|33151346|ref|NP_872699.1| - 2.7 9.0 21.9 4.9 8.1 1.9 3.7 1 1 2 3 3 2 0 Cytochrome c554 and c-prime Tnp_zf-ribbon_2 PF13842.6 gi|33151346|ref|NP_872699.1| - 5.1 8.0 9.1 37 5.2 0.1 4.0 4 0 0 4 4 4 0 DDE_Tnp_1-like zinc-ribbon Zn-ribbon_8 PF09723.10 gi|33151346|ref|NP_872699.1| - 5.3 7.2 9.0 22 5.2 4.3 3.5 3 1 0 3 3 3 0 Zinc ribbon domain MurB_C PF02873.16 gi|33151347|ref|NP_872700.1| - 3.2e-40 136.9 0.0 5e-40 136.3 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_4 PF01565.23 gi|33151347|ref|NP_872700.1| - 5.5e-24 84.5 0.1 8.7e-24 83.8 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain BPL_LplA_LipB PF03099.19 gi|33151348|ref|NP_872701.1| - 1.6e-20 73.4 0.1 3.6e-20 72.2 0.0 1.6 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 gi|33151348|ref|NP_872701.1| - 9.9e-05 22.2 0.2 0.0002 21.2 0.2 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain DUF4964 PF16334.5 gi|33151348|ref|NP_872701.1| - 0.095 12.3 0.0 0.22 11.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4964) FMN_dh PF01070.18 gi|33151350|ref|NP_872703.1| - 7.3e-123 410.0 0.1 8.4e-123 409.8 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|33151350|ref|NP_872703.1| - 1.2e-05 24.9 2.4 1.9e-05 24.2 2.4 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 gi|33151350|ref|NP_872703.1| - 1.9e-05 23.8 0.4 3.8e-05 22.8 0.4 1.5 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|33151350|ref|NP_872703.1| - 0.00029 20.1 0.7 0.00045 19.5 0.7 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase IGPS PF00218.21 gi|33151350|ref|NP_872703.1| - 0.0018 17.5 0.0 0.0033 16.6 0.0 1.4 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|33151350|ref|NP_872703.1| - 0.03 13.8 0.7 0.34 10.3 0.5 2.1 1 1 1 2 2 2 0 Histidine biosynthesis protein DHO_dh PF01180.21 gi|33151350|ref|NP_872703.1| - 0.035 13.3 0.3 0.058 12.6 0.3 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase ThiG PF05690.14 gi|33151350|ref|NP_872703.1| - 0.1 11.9 1.1 1.1 8.6 0.4 2.2 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG Cullin_binding PF03556.15 gi|33151351|ref|NP_872704.1| - 0.11 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Cullin binding Sigma70_r4 PF04545.16 gi|33151352|ref|NP_872705.1| - 6.3e-18 64.0 2.7 4.3e-14 51.8 0.1 2.9 3 0 0 3 3 3 2 Sigma-70, region 4 Sigma70_r2 PF04542.14 gi|33151352|ref|NP_872705.1| - 1e-16 60.4 0.0 2.9e-16 59.0 0.0 1.8 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r1_2 PF00140.20 gi|33151352|ref|NP_872705.1| - 6.7e-05 22.8 0.4 0.00024 21.0 0.4 1.9 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 HTH_25 PF13413.6 gi|33151352|ref|NP_872705.1| - 0.038 13.8 2.2 0.84 9.5 0.3 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|33151352|ref|NP_872705.1| - 0.089 12.9 0.1 5.3 7.2 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix Sigma70_r3 PF04539.16 gi|33151352|ref|NP_872705.1| - 0.21 11.7 6.8 2.9 8.1 0.1 2.9 3 0 0 3 3 3 0 Sigma-70 region 3 HTH_3 PF01381.22 gi|33151354|ref|NP_872707.1| - 2.7e-13 49.8 0.2 5.9e-13 48.7 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|33151354|ref|NP_872707.1| - 2.1e-12 46.9 0.1 3.6e-12 46.1 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Peptidase_S24 PF00717.23 gi|33151354|ref|NP_872707.1| - 1.1e-11 44.5 0.1 2e-11 43.7 0.1 1.4 1 0 0 1 1 1 1 Peptidase S24-like HTH_31 PF13560.6 gi|33151354|ref|NP_872707.1| - 6.5e-09 36.0 0.1 1e-08 35.4 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|33151354|ref|NP_872707.1| - 1.4e-06 28.3 0.0 3e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_23 PF13384.6 gi|33151354|ref|NP_872707.1| - 0.0011 18.7 0.0 0.53 10.2 0.0 2.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_24 PF13412.6 gi|33151354|ref|NP_872707.1| - 0.0025 17.3 0.3 0.16 11.6 0.1 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_25 PF13413.6 gi|33151354|ref|NP_872707.1| - 0.0037 17.1 0.2 0.021 14.7 0.2 2.1 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|33151354|ref|NP_872707.1| - 0.0088 16.5 0.0 0.014 15.8 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_AraC PF00165.23 gi|33151354|ref|NP_872707.1| - 0.053 13.6 0.0 5 7.3 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family MerR PF00376.23 gi|33151354|ref|NP_872707.1| - 0.071 12.9 0.0 8.1 6.3 0.0 2.6 2 0 0 2 2 2 0 MerR family regulatory protein RuBisCo_chap_C PF18087.1 gi|33151354|ref|NP_872707.1| - 0.076 12.7 0.2 0.54 9.9 0.1 2.0 2 0 0 2 2 2 0 Rubisco Assembly chaperone C-terminal domain YdaS_antitoxin PF15943.5 gi|33151354|ref|NP_872707.1| - 0.12 12.3 0.0 0.55 10.1 0.0 2.1 2 1 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_10 PF04967.12 gi|33151354|ref|NP_872707.1| - 0.12 12.2 0.1 21 5.0 0.0 2.3 2 0 0 2 2 2 0 HTH DNA binding domain HTH_Tnp_1 PF01527.20 gi|33151354|ref|NP_872707.1| - 0.15 12.4 0.0 6.1 7.2 0.0 2.5 1 1 0 1 1 1 0 Transposase HTH_28 PF13518.6 gi|33151354|ref|NP_872707.1| - 0.17 12.0 0.0 11 6.2 0.0 2.9 2 1 1 3 3 3 0 Helix-turn-helix domain HTH_35 PF13693.6 gi|33151355|ref|NP_872708.1| - 2.5e-29 101.1 0.9 2.8e-29 100.9 0.9 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 gi|33151355|ref|NP_872708.1| - 0.037 13.8 0.4 8 6.3 0.1 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|33151355|ref|NP_872708.1| - 0.041 13.7 0.7 1.4 8.8 0.1 2.3 1 1 1 2 2 2 0 Homeodomain-like domain DUF3234 PF11572.8 gi|33151355|ref|NP_872708.1| - 0.074 13.2 0.0 0.13 12.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3234) Phage-MuB_C PF09077.11 gi|33151356|ref|NP_872709.1| - 8e-32 109.0 1.1 1.7e-31 107.9 1.1 1.6 1 0 0 1 1 1 1 Mu B transposition protein, C terminal AAA_22 PF13401.6 gi|33151356|ref|NP_872709.1| - 2.1e-15 57.2 0.0 3.9e-15 56.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 gi|33151356|ref|NP_872709.1| - 0.00057 19.3 0.0 0.0026 17.2 0.0 1.9 1 1 0 1 1 1 1 Bacterial TniB protein HTH_28 PF13518.6 gi|33151356|ref|NP_872709.1| - 0.0024 18.0 0.0 0.0065 16.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain AAA_16 PF13191.6 gi|33151356|ref|NP_872709.1| - 0.0069 16.8 0.2 0.38 11.1 0.2 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|33151356|ref|NP_872709.1| - 0.0076 16.8 0.0 0.1 13.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain Sigma70_r4_2 PF08281.12 gi|33151356|ref|NP_872709.1| - 0.023 14.3 0.0 0.055 13.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_37 PF13744.6 gi|33151356|ref|NP_872709.1| - 0.061 13.3 0.0 0.34 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3164 PF11363.8 gi|33151358|ref|NP_872711.1| - 2.5e-89 298.0 2.1 2.8e-89 297.9 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3164) partial_CstF PF15861.5 gi|33151358|ref|NP_872711.1| - 0.0015 18.2 0.8 0.0046 16.7 0.4 2.0 2 0 0 2 2 2 1 Partial cleavage stimulation factor domain PerC PF06069.11 gi|33151359|ref|NP_872712.1| - 0.0084 16.3 1.2 0.01 16.0 1.2 1.1 1 0 0 1 1 1 1 PerC transcriptional activator Trans_coact PF16805.5 gi|33151361|ref|NP_872714.1| - 0.0076 16.3 0.3 0.0076 16.3 0.3 1.2 1 0 0 1 1 1 1 Phage late-transcription coactivator RNA_pol_inhib PF16857.5 gi|33151361|ref|NP_872714.1| - 0.063 13.1 0.1 0.087 12.6 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase inhibitor DUF615 PF04751.14 gi|33151362|ref|NP_872715.1| - 0.041 13.9 0.1 0.063 13.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF615) RNA_pol_A_bac PF01000.26 gi|33151364|ref|NP_872717.1| - 0.0063 16.9 0.2 0.0084 16.5 0.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain Glyco_transf_7N PF13733.6 gi|33151364|ref|NP_872717.1| - 0.016 14.8 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 DUF4479 PF14794.6 gi|33151365|ref|NP_872718.1| - 0.037 13.9 0.2 8.6 6.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4479) Dcc1 PF09724.9 gi|33151365|ref|NP_872718.1| - 0.067 12.5 0.1 0.07 12.4 0.1 1.1 1 0 0 1 1 1 0 Sister chromatid cohesion protein Dcc1 DUF2786 PF10979.8 gi|33151366|ref|NP_872719.1| - 4.5e-13 48.9 4.2 7.2e-13 48.2 4.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2786) Mesd PF10185.9 gi|33151366|ref|NP_872719.1| - 0.046 13.7 0.1 0.091 12.7 0.1 1.4 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor DUF1018 PF06252.12 gi|33151371|ref|NP_872724.1| - 2.4e-34 118.9 2.7 3e-34 118.6 2.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1018) PPR_2 PF13041.6 gi|33151371|ref|NP_872724.1| - 0.035 14.3 1.6 1.4 9.2 0.4 3.3 3 1 1 4 4 4 0 PPR repeat family DMAP1 PF05499.12 gi|33151371|ref|NP_872724.1| - 0.045 13.6 0.4 0.056 13.3 0.4 1.1 1 0 0 1 1 1 0 DNA methyltransferase 1-associated protein 1 (DMAP1) Tli4_C PF18426.1 gi|33151371|ref|NP_872724.1| - 0.1 12.9 0.0 0.44 10.9 0.0 1.8 2 0 0 2 2 2 0 Tle cognate immunity protein 4 C-terminal domain Mor PF08765.11 gi|33151372|ref|NP_872725.1| - 5.5e-23 81.0 0.0 6.3e-23 80.8 0.0 1.1 1 0 0 1 1 1 1 Mor transcription activator family Bot1p PF12298.8 gi|33151372|ref|NP_872725.1| - 0.01 16.0 0.1 0.024 14.8 0.0 1.6 2 0 0 2 2 2 0 Eukaryotic mitochondrial regulator protein HTH_28 PF13518.6 gi|33151372|ref|NP_872725.1| - 0.03 14.4 0.0 0.08 13.1 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain DAO_C PF16901.5 gi|33151372|ref|NP_872725.1| - 0.064 13.1 0.0 0.079 12.8 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase HTH_23 PF13384.6 gi|33151372|ref|NP_872725.1| - 0.077 12.8 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Amidase_2 PF01510.25 gi|33151373|ref|NP_872726.1| - 8.6e-18 65.0 0.8 1.1e-17 64.6 0.8 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase EF-hand_5 PF13202.6 gi|33151373|ref|NP_872726.1| - 0.0092 15.4 0.1 0.029 13.9 0.0 1.8 2 0 0 2 2 2 1 EF hand DUF1877 PF08974.10 gi|33151373|ref|NP_872726.1| - 0.019 15.1 0.0 0.039 14.0 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1877) EF-hand_1 PF00036.32 gi|33151373|ref|NP_872726.1| - 0.032 13.8 0.2 0.091 12.4 0.0 1.8 2 0 0 2 2 2 0 EF hand Otopetrin PF03189.13 gi|33151374|ref|NP_872727.1| - 0.15 10.9 0.2 0.17 10.7 0.2 1.0 1 0 0 1 1 1 0 Otopetrin DUF4064 PF13273.6 gi|33151374|ref|NP_872727.1| - 0.25 11.6 5.1 0.31 11.3 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2644 PF10841.8 gi|33151375|ref|NP_872728.1| - 6.1e-36 122.4 1.1 7e-36 122.3 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2644) DUF2681 PF10883.8 gi|33151376|ref|NP_872729.1| - 3.6e-36 123.5 2.1 4e-36 123.3 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) DUF4381 PF14316.6 gi|33151376|ref|NP_872729.1| - 0.00062 20.0 0.2 0.0007 19.9 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) DivIC PF04977.15 gi|33151376|ref|NP_872729.1| - 0.003 17.3 3.7 0.0042 16.8 3.7 1.3 1 0 0 1 1 1 1 Septum formation initiator T2SSM PF04612.12 gi|33151376|ref|NP_872729.1| - 0.01 15.9 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M DUF948 PF06103.11 gi|33151376|ref|NP_872729.1| - 0.017 15.4 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Phage_terminase PF10668.9 gi|33151376|ref|NP_872729.1| - 0.019 14.9 0.5 0.027 14.5 0.5 1.3 1 0 0 1 1 1 0 Phage terminase small subunit PAP_PilO PF06864.12 gi|33151376|ref|NP_872729.1| - 0.023 13.5 0.3 0.026 13.4 0.3 1.1 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CcmD PF04995.14 gi|33151376|ref|NP_872729.1| - 0.027 14.5 0.7 0.054 13.6 0.7 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) LapA_dom PF06305.11 gi|33151376|ref|NP_872729.1| - 0.03 14.1 3.4 0.065 13.1 3.4 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain OPA3 PF07047.12 gi|33151376|ref|NP_872729.1| - 0.03 14.1 0.7 0.065 13.0 0.0 1.7 2 0 0 2 2 2 0 Optic atrophy 3 protein (OPA3) Connexin PF00029.19 gi|33151376|ref|NP_872729.1| - 0.036 13.8 0.2 0.042 13.6 0.2 1.0 1 0 0 1 1 1 0 Connexin DUF3426 PF11906.8 gi|33151376|ref|NP_872729.1| - 0.037 14.2 0.0 0.042 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3426) LMBR1 PF04791.16 gi|33151376|ref|NP_872729.1| - 0.062 12.2 0.1 0.069 12.0 0.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein BatA PF07584.11 gi|33151376|ref|NP_872729.1| - 0.073 13.4 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal ArsP_1 PF03773.13 gi|33151376|ref|NP_872729.1| - 0.21 10.7 0.2 0.24 10.5 0.2 1.0 1 0 0 1 1 1 0 Predicted permease zf-dskA_traR PF01258.17 gi|33151378|ref|NP_872731.1| - 1e-11 44.6 7.8 1.5e-11 44.1 7.8 1.2 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DUF2730 PF10805.8 gi|33151379|ref|NP_872732.1| - 3.8e-41 139.3 0.6 4.4e-41 139.1 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) XhlA PF10779.9 gi|33151379|ref|NP_872732.1| - 0.013 15.7 0.7 0.013 15.7 0.7 1.7 2 0 0 2 2 2 0 Haemolysin XhlA VEGFR-2_TMD PF17988.1 gi|33151379|ref|NP_872732.1| - 4.6 6.8 6.3 1.1 8.8 1.6 2.0 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain HTH_12 PF08461.10 gi|33151380|ref|NP_872733.1| - 0.0089 16.0 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain DUF1564 PF07600.11 gi|33151380|ref|NP_872733.1| - 0.022 14.5 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) HTH_5 PF01022.20 gi|33151380|ref|NP_872733.1| - 0.075 12.9 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF2513 PF10711.9 gi|33151380|ref|NP_872733.1| - 0.075 13.3 0.0 0.089 13.1 0.0 1.1 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) FUR PF01475.19 gi|33151380|ref|NP_872733.1| - 0.18 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family DUF3486 PF11985.8 gi|33151381|ref|NP_872734.1| - 6e-59 199.5 7.3 6.7e-59 199.3 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3486) TetR_C_4 PF08359.11 gi|33151381|ref|NP_872734.1| - 0.076 13.2 1.1 0.18 11.9 1.0 1.7 1 1 0 1 1 1 0 YsiA-like protein, C-terminal region SecA_SW PF07516.13 gi|33151381|ref|NP_872734.1| - 0.2 11.7 2.2 0.37 10.8 0.5 2.0 2 0 0 2 2 2 0 SecA Wing and Scaffold domain Histone_HNS PF00816.21 gi|33151381|ref|NP_872734.1| - 0.34 11.8 3.5 2.9 8.8 0.0 2.3 2 0 0 2 2 2 0 H-NS histone family Terminase_6 PF03237.15 gi|33151382|ref|NP_872735.1| - 1.1e-05 25.2 0.0 2e-05 24.4 0.0 1.5 1 1 0 1 1 1 1 Terminase-like family DUF935 PF06074.12 gi|33151383|ref|NP_872736.1| - 3.1e-202 672.9 0.1 3.5e-202 672.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF935) Phage_tail_S PF05069.13 gi|33151384|ref|NP_872737.1| - 7.5e-23 81.0 0.0 1e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Phage virion morphogenesis family SPAN PF02510.14 gi|33151384|ref|NP_872737.1| - 0.1 11.8 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Surface presentation of antigens protein Mu-like_gpT PF10124.9 gi|33151386|ref|NP_872739.1| - 9.5e-113 376.3 0.0 1.1e-112 376.1 0.0 1.0 1 0 0 1 1 1 1 Mu-like prophage major head subunit gpT FluMu_N PF17891.1 gi|33151387|ref|NP_872740.1| - 6.8e-24 83.4 0.0 4.9e-22 77.4 0.0 2.3 2 0 0 2 2 2 2 Mu-like prophage FluMu N-terminal domain HeH PF12949.7 gi|33151387|ref|NP_872740.1| - 0.00091 18.9 0.1 0.0032 17.1 0.1 1.9 1 1 0 1 1 1 1 HeH/LEM domain Endonuc-dimeris PF09124.10 gi|33151387|ref|NP_872740.1| - 0.041 14.1 0.0 0.083 13.1 0.0 1.4 1 0 0 1 1 1 0 T4 recombination endonuclease VII, dimerisation DUF1320 PF07030.12 gi|33151388|ref|NP_872741.1| - 1.8e-38 131.5 0.5 2e-38 131.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1320) DUF1834 PF08873.11 gi|33151389|ref|NP_872742.1| - 2.3e-51 174.5 0.0 2.6e-51 174.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1834) OmpH PF03938.14 gi|33151393|ref|NP_872746.1| - 0.0009 19.6 3.9 0.0009 19.6 3.9 6.2 4 3 2 6 6 6 2 Outer membrane protein (OmpH-like) BORCS6 PF10157.9 gi|33151393|ref|NP_872746.1| - 0.033 14.4 3.7 0.088 13.0 0.7 3.2 2 1 1 3 3 3 0 BLOC-1-related complex sub-unit 6 DUF2681 PF10883.8 gi|33151393|ref|NP_872746.1| - 0.17 12.3 0.2 0.17 12.3 0.2 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2681) BLOC1_2 PF10046.9 gi|33151393|ref|NP_872746.1| - 6.9 7.0 32.8 1.2 9.5 1.2 6.8 5 2 2 7 7 7 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ZapD PF07072.11 gi|33151395|ref|NP_872748.1| - 0.0086 15.9 0.4 0.0099 15.6 0.4 1.1 1 0 0 1 1 1 1 Cell division protein CENP-F_leu_zip PF10473.9 gi|33151395|ref|NP_872748.1| - 0.015 15.3 0.5 0.017 15.2 0.5 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BLOC1_2 PF10046.9 gi|33151395|ref|NP_872748.1| - 0.028 14.7 1.7 0.44 10.9 0.3 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF724 PF05266.14 gi|33151395|ref|NP_872748.1| - 0.041 13.7 0.2 0.052 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CK2S PF15011.6 gi|33151395|ref|NP_872748.1| - 0.061 13.2 0.3 0.084 12.8 0.3 1.3 1 1 0 1 1 1 0 Casein Kinase 2 substrate F_actin_bund_C PF18060.1 gi|33151395|ref|NP_872748.1| - 0.22 11.7 3.9 0.28 11.3 3.9 1.3 1 0 0 1 1 1 0 F actin bundling C terminal DUF2460 PF09343.10 gi|33151401|ref|NP_872754.1| - 0.0035 16.9 0.2 0.0092 15.5 0.1 1.7 2 0 0 2 2 2 1 Conserved hypothetical protein 2217 (DUF2460) DUF2163 PF09931.9 gi|33151402|ref|NP_872755.1| - 0.0023 18.2 0.0 0.0023 18.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2163) Phage_BR0599 PF09356.10 gi|33151403|ref|NP_872756.1| - 3.3e-21 75.4 0.1 8e-21 74.2 0.1 1.6 1 0 0 1 1 1 1 Phage conserved hypothetical protein BR0599 DUF2163 PF09931.9 gi|33151403|ref|NP_872756.1| - 0.00074 19.8 0.0 0.0039 17.4 0.0 2.0 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2163) Phage-tail_3 PF13550.6 gi|33151407|ref|NP_872760.1| - 1.4e-21 77.0 0.5 3.2e-21 75.9 0.1 1.7 2 0 0 2 2 2 1 Putative phage tail protein DNA_ligase_A_N PF04675.14 gi|33151407|ref|NP_872760.1| - 0.079 13.3 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 DNA ligase N terminus DUF5013 PF16405.5 gi|33151408|ref|NP_872761.1| - 0.016 15.5 0.3 0.022 15.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5013) DUF2968 PF11180.8 gi|33151409|ref|NP_872762.1| - 0.1 12.2 0.1 0.54 9.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) Mqo PF06039.15 gi|33151416|ref|NP_872769.1| - 4.6e-214 711.5 0.0 5.4e-214 711.3 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) DAO PF01266.24 gi|33151416|ref|NP_872769.1| - 5.5e-07 29.5 0.0 8e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DUF3386 PF11866.8 gi|33151416|ref|NP_872769.1| - 0.049 13.1 0.1 0.11 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3386) NAD_binding_8 PF13450.6 gi|33151416|ref|NP_872769.1| - 0.14 12.4 0.0 0.4 10.9 0.0 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF2914 PF11141.8 gi|33151416|ref|NP_872769.1| - 0.2 11.4 0.1 0.46 10.3 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2914) RraA-like PF03737.15 gi|33151417|ref|NP_872770.1| - 6.1e-36 123.8 0.1 6.8e-36 123.7 0.1 1.0 1 0 0 1 1 1 1 Aldolase/RraA Methyltransf_3 PF01596.17 gi|33151419|ref|NP_872772.1| - 6.9e-08 31.9 0.0 7.4e-08 31.8 0.0 1.0 1 0 0 1 1 1 1 O-methyltransferase MTS PF05175.14 gi|33151419|ref|NP_872772.1| - 4.4e-07 29.6 0.1 5e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|33151419|ref|NP_872772.1| - 2.5e-06 27.4 0.0 3.2e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33151419|ref|NP_872772.1| - 3.4e-06 27.7 0.0 4.8e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|33151419|ref|NP_872772.1| - 7.6e-06 25.8 0.0 7.6e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_16 PF10294.9 gi|33151419|ref|NP_872772.1| - 0.00014 21.6 0.0 0.00014 21.6 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 gi|33151419|ref|NP_872772.1| - 0.00016 21.2 0.1 0.00018 21.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|33151419|ref|NP_872772.1| - 0.00062 19.7 0.1 0.00081 19.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|33151419|ref|NP_872772.1| - 0.0012 18.3 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|33151419|ref|NP_872772.1| - 0.0031 17.5 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33151419|ref|NP_872772.1| - 0.0044 17.6 0.0 0.0061 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33151419|ref|NP_872772.1| - 0.0074 16.1 0.0 0.0074 16.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TrmK PF04816.12 gi|33151419|ref|NP_872772.1| - 0.016 14.7 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_12 PF08242.12 gi|33151419|ref|NP_872772.1| - 0.043 14.6 0.0 0.063 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|33151419|ref|NP_872772.1| - 0.073 12.1 0.0 0.073 12.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.15 gi|33151419|ref|NP_872772.1| - 0.091 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 95 GidB PF02527.15 gi|33151419|ref|NP_872772.1| - 0.1 11.9 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Pyrophosphatase PF00719.19 gi|33151420|ref|NP_872773.1| - 3.5e-53 179.7 0.0 4e-53 179.5 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 gi|33151420|ref|NP_872773.1| - 0.026 14.2 0.0 0.054 13.2 0.0 1.6 2 0 0 2 2 2 0 Inorganic Pyrophosphatase NUDIX PF00293.28 gi|33151423|ref|NP_872776.1| - 1.1e-26 93.4 0.3 1.6e-26 92.9 0.1 1.4 2 0 0 2 2 2 1 NUDIX domain TauE PF01925.19 gi|33151424|ref|NP_872777.1| - 1.3e-46 159.2 34.5 1.5e-46 159.0 34.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE LGT PF01790.18 gi|33151425|ref|NP_872778.1| - 7e-77 257.9 8.5 8.1e-77 257.7 8.5 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase HAD_2 PF13419.6 gi|33151427|ref|NP_872780.1| - 4.5e-33 114.8 0.0 5.5e-33 114.5 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|33151427|ref|NP_872780.1| - 1.5e-21 77.6 0.1 2e-20 74.0 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|33151427|ref|NP_872780.1| - 3.1e-12 47.3 0.0 4.5e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|33151427|ref|NP_872780.1| - 3e-08 33.6 0.0 5.4e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 gi|33151427|ref|NP_872780.1| - 5.7e-05 23.0 0.2 1.7 8.3 0.0 3.2 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|33151427|ref|NP_872780.1| - 0.00025 21.1 0.1 0.0024 17.9 0.1 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PNK3P PF08645.11 gi|33151427|ref|NP_872780.1| - 0.004 16.9 0.1 4.9 6.8 0.0 3.0 3 0 0 3 3 3 2 Polynucleotide kinase 3 phosphatase TFA2_Winged_2 PF18121.1 gi|33151427|ref|NP_872780.1| - 0.012 15.2 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 TFA2 Winged helix domain 2 S6PP PF05116.13 gi|33151427|ref|NP_872780.1| - 0.033 13.7 0.3 0.68 9.4 0.0 2.6 2 1 1 3 3 3 0 Sucrose-6F-phosphate phosphohydrolase Acid_phosphat_B PF03767.14 gi|33151427|ref|NP_872780.1| - 0.086 12.4 0.3 5.2 6.6 0.0 2.6 2 1 0 2 2 2 0 HAD superfamily, subfamily IIIB (Acid phosphatase) tRNA-synt_1b PF00579.25 gi|33151428|ref|NP_872781.1| - 1.3e-87 293.8 0.1 1.6e-87 293.6 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Zw10 PF06248.13 gi|33151428|ref|NP_872781.1| - 0.082 11.5 0.1 1.7 7.1 0.0 2.0 2 0 0 2 2 2 0 Centromere/kinetochore Zw10 PLN_propep PF16485.5 gi|33151428|ref|NP_872781.1| - 0.085 12.6 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Protealysin propeptide MatP PF06303.12 gi|33151429|ref|NP_872782.1| - 3e-38 130.2 9.8 3e-38 130.2 9.8 1.9 2 0 0 2 2 2 1 MatP N-terminal domain MatP_C PF17414.2 gi|33151429|ref|NP_872782.1| - 4.4e-28 97.3 6.2 4.4e-28 97.3 6.2 1.7 2 0 0 2 2 2 1 MatP C-terminal ribbon-helix-helix domain DUF2288 PF10052.9 gi|33151429|ref|NP_872782.1| - 0.04 14.0 4.2 0.048 13.8 1.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2288) O-antigen_lig PF13425.6 gi|33151429|ref|NP_872782.1| - 2.3 6.9 3.8 2.6 6.7 3.8 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein AAA_32 PF13654.6 gi|33151430|ref|NP_872783.1| - 7.5e-16 58.0 0.2 1.1e-15 57.5 0.2 1.1 1 0 0 1 1 1 1 AAA domain Lon_C PF05362.13 gi|33151430|ref|NP_872783.1| - 1.8e-07 30.9 0.0 3.2e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain F-112 PF09645.10 gi|33151430|ref|NP_872783.1| - 0.075 13.1 0.2 0.16 12.1 0.2 1.6 1 0 0 1 1 1 0 F-112 protein Tricorn_C1 PF14684.6 gi|33151430|ref|NP_872783.1| - 0.12 12.5 1.6 0.92 9.6 0.0 2.6 2 0 0 2 2 2 0 Tricorn protease C1 domain DUF2420 PF10336.9 gi|33151430|ref|NP_872783.1| - 0.13 12.3 1.0 0.37 10.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2420) SET_assoc PF11767.8 gi|33151431|ref|NP_872784.1| - 0.0042 16.7 0.0 0.0042 16.7 0.0 1.0 1 0 0 1 1 1 1 Histone lysine methyltransferase SET associated FabA PF07977.13 gi|33151432|ref|NP_872785.1| - 4.4e-51 172.1 0.0 5.1e-51 171.9 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain N_methyl PF07963.12 gi|33151433|ref|NP_872786.1| - 0.00056 19.4 3.2 0.00091 18.7 3.2 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif N_methyl PF07963.12 gi|33151434|ref|NP_872787.1| - 6.1e-05 22.4 0.5 9.9e-05 21.7 0.5 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF2509 PF10713.9 gi|33151434|ref|NP_872787.1| - 1.5 8.9 7.5 7.7 6.6 0.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2509) DUF2572 PF10833.8 gi|33151435|ref|NP_872788.1| - 1.9e-09 37.6 0.9 2.5e-09 37.2 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2572) UPF0730 PF15827.5 gi|33151435|ref|NP_872788.1| - 0.11 12.2 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 UPF0730 unknown protein family DUF5374 PF17344.2 gi|33151436|ref|NP_872789.1| - 5.7e-17 61.3 0.6 1.1e-16 60.4 0.6 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5374) DUF1481 PF07356.12 gi|33151436|ref|NP_872789.1| - 0.0035 17.1 0.1 0.0037 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1481) DUF2681 PF10883.8 gi|33151436|ref|NP_872789.1| - 0.012 15.9 2.7 0.021 15.2 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) LapA_dom PF06305.11 gi|33151436|ref|NP_872789.1| - 0.25 11.2 3.9 0.46 10.3 2.9 2.0 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Exonuc_V_gamma PF04257.14 gi|33151437|ref|NP_872790.1| - 2.8e-277 922.0 34.0 4.2e-277 921.4 34.0 1.2 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit RecC_C PF17946.1 gi|33151437|ref|NP_872790.1| - 6.7e-39 133.7 0.0 1.6e-38 132.5 0.0 1.6 1 0 0 1 1 1 1 RecC C-terminal domain Peptidase_M16_M PF16187.5 gi|33151438|ref|NP_872791.1| - 7.6e-52 176.3 7.9 7.6e-52 176.3 7.9 3.4 1 1 2 3 3 3 1 Middle or third domain of peptidase_M16 Peptidase_M16 PF00675.20 gi|33151438|ref|NP_872791.1| - 3.7e-33 114.6 5.5 5.3e-33 114.1 0.1 3.4 4 0 0 4 4 4 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 gi|33151438|ref|NP_872791.1| - 7.2e-28 97.8 8.9 3.7e-16 59.7 0.2 3.7 4 0 0 4 4 4 3 Peptidase M16 inactive domain EAP30 PF04157.16 gi|33151438|ref|NP_872791.1| - 0.061 12.6 0.4 0.48 9.7 0.2 2.4 2 0 0 2 2 2 0 EAP30/Vps36 family Apo-CIII PF05778.12 gi|33151438|ref|NP_872791.1| - 0.11 12.2 0.0 0.35 10.5 0.0 1.9 1 0 0 1 1 1 0 Apolipoprotein CIII (Apo-CIII) TTRAP PF14203.6 gi|33151438|ref|NP_872791.1| - 3.9 7.5 5.8 5.6 7.0 0.1 3.8 4 0 0 4 4 4 0 Putative tranposon-transfer assisting protein DUF87 PF01935.17 gi|33151438|ref|NP_872791.1| - 8.5 6.4 9.1 1.7 8.7 0.8 3.3 3 1 0 3 3 3 0 Helicase HerA, central domain DnaJ_C PF01556.18 gi|33151439|ref|NP_872792.1| - 2.9e-44 150.7 0.0 4.1e-44 150.3 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|33151439|ref|NP_872792.1| - 3.1e-27 94.5 4.0 4.6e-27 93.9 4.0 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|33151439|ref|NP_872792.1| - 1.9e-13 50.6 16.7 3.4e-13 49.7 16.7 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|33151439|ref|NP_872792.1| - 3.7e-06 26.8 14.6 0.00013 21.8 2.7 3.3 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein Cytochrom_c3_2 PF14537.6 gi|33151439|ref|NP_872792.1| - 0.094 13.2 16.1 1.3 9.6 16.1 2.5 1 1 0 1 1 1 0 Cytochrome c3 DUF5351 PF17302.2 gi|33151439|ref|NP_872792.1| - 2.4 8.4 18.1 11 6.2 0.7 4.5 4 0 0 4 4 4 0 Family of unknown function (DUF5351) zf-RING_10 PF16685.5 gi|33151439|ref|NP_872792.1| - 3.3 7.9 5.3 0.39 10.9 0.2 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 Lar_restr_allev PF14354.6 gi|33151439|ref|NP_872792.1| - 4.1 7.8 9.9 41 4.6 7.9 3.1 2 1 1 3 3 3 0 Restriction alleviation protein Lar zf-RING_7 PF02591.15 gi|33151439|ref|NP_872792.1| - 4.3 7.6 7.0 31 4.9 0.3 3.4 3 0 0 3 3 3 0 C4-type zinc ribbon domain TackOD1 PF18551.1 gi|33151439|ref|NP_872792.1| - 8.8 5.9 10.8 5 6.8 2.0 2.1 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HSP70 PF00012.20 gi|33151440|ref|NP_872793.1| - 1.3e-265 882.3 19.5 1.5e-265 882.1 19.5 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|33151440|ref|NP_872793.1| - 6e-15 54.9 1.2 1.7e-12 46.8 0.4 2.6 2 1 0 2 2 2 2 MreB/Mbl protein FGGY_C PF02782.16 gi|33151440|ref|NP_872793.1| - 5.3e-05 23.0 0.0 0.00015 21.5 0.0 1.8 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Peptidase_M13_N PF05649.13 gi|33151441|ref|NP_872794.1| - 1.2e-84 285.2 9.9 1.6e-84 284.8 9.9 1.2 1 0 0 1 1 1 1 Peptidase family M13 Peptidase_M13 PF01431.21 gi|33151441|ref|NP_872794.1| - 3.5e-66 222.7 0.0 8.4e-66 221.5 0.0 1.7 1 0 0 1 1 1 1 Peptidase family M13 Apolipoprotein PF01442.18 gi|33151443|ref|NP_872796.1| - 8.4e-08 32.3 24.9 2.6e-07 30.7 24.9 1.7 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain LEA_4 PF02987.16 gi|33151443|ref|NP_872796.1| - 5e-07 29.7 63.2 0.0013 18.7 9.7 5.1 1 1 4 5 5 5 4 Late embryogenesis abundant protein YtxH PF12732.7 gi|33151443|ref|NP_872796.1| - 7.3e-06 26.4 37.9 0.031 14.8 15.2 3.3 1 1 1 2 2 2 1 YtxH-like protein DUF883 PF05957.13 gi|33151443|ref|NP_872796.1| - 5.7e-05 23.6 27.4 0.018 15.6 9.5 2.2 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF883) Spc7 PF08317.11 gi|33151443|ref|NP_872796.1| - 0.018 14.0 26.2 0.048 12.5 12.6 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein CysG_dimeriser PF10414.9 gi|33151443|ref|NP_872796.1| - 0.065 13.0 0.3 37 4.1 0.0 3.6 3 0 0 3 3 3 0 Sirohaem synthase dimerisation region LPAM_1 PF08139.12 gi|33151443|ref|NP_872796.1| - 0.093 13.3 4.2 0.57 10.8 4.2 2.3 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site CdvA PF18822.1 gi|33151443|ref|NP_872796.1| - 0.42 10.5 26.9 0.2 11.5 6.4 3.2 1 1 2 3 3 3 0 CdvA-like coiled-coil domain FAM184 PF15665.5 gi|33151443|ref|NP_872796.1| - 0.42 10.4 24.6 0.51 10.1 24.6 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Exonuc_VII_L PF02601.15 gi|33151443|ref|NP_872796.1| - 0.56 9.7 12.3 0.63 9.5 12.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit UPF0242 PF06785.11 gi|33151443|ref|NP_872796.1| - 0.72 9.9 11.6 1 9.4 11.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Phe_tRNA-synt_N PF02912.18 gi|33151443|ref|NP_872796.1| - 0.73 9.8 29.3 0.7 9.9 5.0 3.8 1 1 3 4 4 4 0 Aminoacyl tRNA synthetase class II, N-terminal domain DUF3584 PF12128.8 gi|33151443|ref|NP_872796.1| - 0.77 7.2 20.4 0.87 7.0 20.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Baculo_p24 PF05073.12 gi|33151443|ref|NP_872796.1| - 0.99 9.2 9.1 4.3 7.1 9.1 1.9 1 1 0 1 1 1 0 Baculovirus P24 capsid protein DUF4407 PF14362.6 gi|33151443|ref|NP_872796.1| - 2.2 7.6 18.8 2.4 7.4 18.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ApoLp-III PF07464.11 gi|33151443|ref|NP_872796.1| - 3.3 7.8 24.4 16 5.6 24.4 2.0 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF848 PF05852.11 gi|33151443|ref|NP_872796.1| - 3.9 7.6 14.7 8.5 6.5 7.8 2.3 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) HisKA_3 PF07730.13 gi|33151443|ref|NP_872796.1| - 4.6 7.8 16.8 1.1 9.8 2.2 3.7 1 1 2 3 3 3 0 Histidine kinase DUF349 PF03993.12 gi|33151443|ref|NP_872796.1| - 4.6 7.6 33.2 6.9 7.0 7.1 3.3 1 1 2 3 3 3 0 Domain of Unknown Function (DUF349) TetR_C_34 PF17929.1 gi|33151443|ref|NP_872796.1| - 7 6.8 7.7 14 5.8 1.2 3.2 1 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Prominin PF05478.11 gi|33151443|ref|NP_872796.1| - 8.4 4.2 12.2 19 3.0 12.2 1.5 1 1 0 1 1 1 0 Prominin Dna2 PF08696.11 gi|33151443|ref|NP_872796.1| - 9 6.0 10.3 10 5.9 5.5 2.1 1 1 1 2 2 2 0 DNA replication factor Dna2 Pex19 PF04614.12 gi|33151443|ref|NP_872796.1| - 9.2 6.0 28.0 12 5.6 28.0 1.2 1 0 0 1 1 1 0 Pex19 protein family DUF4175 PF13779.6 gi|33151443|ref|NP_872796.1| - 9.4 4.0 24.2 12 3.6 24.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) RNase_E_G PF10150.9 gi|33151445|ref|NP_872798.1| - 1.7e-94 316.3 0.0 3.9e-94 315.1 0.0 1.7 1 0 0 1 1 1 1 Ribonuclease E/G family S1 PF00575.23 gi|33151445|ref|NP_872798.1| - 3.4e-15 56.1 0.1 9.2e-15 54.8 0.1 1.8 1 0 0 1 1 1 1 S1 RNA binding domain zf-FPG_IleRS PF06827.14 gi|33151445|ref|NP_872798.1| - 0.12 12.3 0.1 0.28 11.1 0.1 1.6 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS DUF3298 PF11738.8 gi|33151446|ref|NP_872799.1| - 1.7e-08 35.3 0.2 8.5e-08 33.1 0.1 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF3298) PdaC PF13739.6 gi|33151446|ref|NP_872799.1| - 0.0059 17.6 0.2 0.023 15.7 0.2 2.0 1 0 0 1 1 1 1 Deacetylase PdaC Get5_C PF18514.1 gi|33151446|ref|NP_872799.1| - 0.13 12.0 0.0 0.32 10.8 0.0 1.7 1 0 0 1 1 1 0 Get5 C-terminal domain DUF3388 PF11868.8 gi|33151446|ref|NP_872799.1| - 0.13 11.6 0.3 0.25 10.6 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3388) ICMT PF04140.14 gi|33151447|ref|NP_872800.1| - 3e-28 98.1 4.6 3e-28 98.1 4.6 2.2 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 gi|33151447|ref|NP_872800.1| - 1.3e-08 35.2 7.0 2.5e-08 34.2 3.8 2.2 2 0 0 2 2 2 1 Phospholipid methyltransferase DUF1295 PF06966.12 gi|33151447|ref|NP_872800.1| - 0.24 10.9 6.1 0.4 10.2 6.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1295) Phage_holin_3_6 PF07332.11 gi|33151447|ref|NP_872800.1| - 3.5 7.7 8.1 4.9 7.2 4.0 2.5 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III UbiD PF01977.16 gi|33151448|ref|NP_872801.1| - 3.9e-167 556.2 0.0 4.4e-167 556.0 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ZnuA PF01297.17 gi|33151449|ref|NP_872802.1| - 1e-59 202.0 0.5 1.2e-59 201.8 0.5 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Apolipoprotein PF01442.18 gi|33151449|ref|NP_872802.1| - 0.021 14.7 2.0 0.039 13.8 2.0 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF2796 PF10986.8 gi|33151449|ref|NP_872802.1| - 0.024 14.6 13.0 0.039 13.9 13.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) DpnI_C PF17726.1 gi|33151449|ref|NP_872802.1| - 0.037 14.1 0.0 0.1 12.7 0.0 1.8 1 0 0 1 1 1 0 Dam-replacing HTH domain SelP_N PF04592.14 gi|33151449|ref|NP_872802.1| - 0.32 10.4 11.4 0.49 9.8 11.4 1.3 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Rib_5-P_isom_A PF06026.14 gi|33151450|ref|NP_872803.1| - 3.2e-57 192.9 0.1 4.4e-57 192.5 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|33151450|ref|NP_872803.1| - 9.1e-06 25.7 0.6 0.0002 21.4 0.1 2.4 1 1 1 2 2 2 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|33151450|ref|NP_872803.1| - 0.0083 15.3 0.1 0.014 14.5 0.1 1.4 1 0 0 1 1 1 1 Putative sugar-binding domain PsiB PF06290.11 gi|33151450|ref|NP_872803.1| - 0.09 12.2 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) PGM_PMM_I PF02878.16 gi|33151451|ref|NP_872804.1| - 1.6e-46 157.5 0.0 3.3e-46 156.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|33151451|ref|NP_872804.1| - 2.1e-31 108.5 0.1 4.1e-31 107.5 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|33151451|ref|NP_872804.1| - 1.9e-18 67.0 0.1 5.5e-18 65.5 0.1 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|33151451|ref|NP_872804.1| - 1.9e-12 47.1 0.1 5.6e-12 45.7 0.1 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain FKBP_C PF00254.28 gi|33151452|ref|NP_872805.1| - 9.2e-10 38.7 0.0 1.4e-09 38.1 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ribosomal_L21p PF00829.21 gi|33151453|ref|NP_872806.1| - 5.2e-39 132.6 3.5 5.7e-39 132.4 3.5 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein Ribosomal_L27 PF01016.19 gi|33151454|ref|NP_872807.1| - 1.8e-39 133.6 4.4 2e-39 133.5 4.4 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein EamA PF00892.20 gi|33151455|ref|NP_872808.1| - 2.1e-34 118.6 46.4 6.7e-18 65.2 21.6 2.7 2 1 0 2 2 2 2 EamA-like transporter family DUF4579 PF15158.6 gi|33151455|ref|NP_872808.1| - 5.4 6.7 9.6 0.28 10.9 0.5 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4579) Multi_Drug_Res PF00893.19 gi|33151455|ref|NP_872808.1| - 5.8 7.7 18.1 0.038 14.7 3.8 3.2 2 2 0 2 2 2 0 Small Multidrug Resistance protein Hydrolase_3 PF08282.12 gi|33151456|ref|NP_872809.1| - 1.7e-51 175.4 0.1 2e-51 175.2 0.1 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|33151456|ref|NP_872809.1| - 9.8e-11 41.7 0.0 2.9e-09 36.8 0.0 2.3 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|33151456|ref|NP_872809.1| - 6.5e-08 33.1 0.1 0.0012 19.2 0.0 3.5 2 1 2 4 4 4 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|33151456|ref|NP_872809.1| - 6e-05 23.5 0.0 0.016 15.7 0.0 2.5 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|33151456|ref|NP_872809.1| - 0.0012 19.0 0.8 1.7 8.7 0.0 3.7 2 1 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Pribosyltran PF00156.27 gi|33151457|ref|NP_872810.1| - 5.7e-07 29.2 0.0 9e-07 28.5 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|33151457|ref|NP_872810.1| - 0.007 15.8 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|33151457|ref|NP_872810.1| - 0.081 12.4 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase DZR PF12773.7 gi|33151457|ref|NP_872810.1| - 0.14 12.2 10.5 0.49 10.5 10.5 1.9 1 1 0 1 1 1 0 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|33151457|ref|NP_872810.1| - 0.16 12.0 9.9 0.29 11.1 9.9 1.4 1 0 0 1 1 1 0 zinc-ribbons MTS PF05175.14 gi|33151458|ref|NP_872811.1| - 1.5e-56 190.6 0.0 2.1e-56 190.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MTS_N PF08468.11 gi|33151458|ref|NP_872811.1| - 6.6e-49 166.0 0.0 1.3e-48 165.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain N-terminal Methyltransf_25 PF13649.6 gi|33151458|ref|NP_872811.1| - 2.5e-09 37.7 0.0 4.4e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33151458|ref|NP_872811.1| - 5.1e-09 36.1 0.0 8.9e-09 35.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33151458|ref|NP_872811.1| - 3.5e-08 34.1 0.1 1.1e-07 32.6 0.0 1.9 2 0 0 2 2 1 1 Methyltransferase domain PrmA PF06325.13 gi|33151458|ref|NP_872811.1| - 1.4e-06 27.9 0.0 2e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_10 PF05971.12 gi|33151458|ref|NP_872811.1| - 3.3e-06 26.7 0.0 6.6e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 RNA methyltransferase Methyltransf_23 PF13489.6 gi|33151458|ref|NP_872811.1| - 3.5e-06 27.0 0.0 9.8e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|33151458|ref|NP_872811.1| - 2.8e-05 23.9 0.0 5.3e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Lysine methyltransferase TehB PF03848.14 gi|33151458|ref|NP_872811.1| - 0.00012 21.6 0.0 0.00018 20.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 gi|33151458|ref|NP_872811.1| - 0.00018 20.9 0.0 0.00026 20.3 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_18 PF12847.7 gi|33151458|ref|NP_872811.1| - 0.00019 21.4 0.0 0.00036 20.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|33151458|ref|NP_872811.1| - 0.00055 19.6 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_11 PF08241.12 gi|33151458|ref|NP_872811.1| - 0.00096 19.8 0.0 0.0017 19.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|33151458|ref|NP_872811.1| - 0.015 15.0 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_29 PF03141.16 gi|33151458|ref|NP_872811.1| - 0.032 12.8 0.0 0.055 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase CMAS PF02353.20 gi|33151458|ref|NP_872811.1| - 0.062 12.6 0.0 0.096 12.0 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF938 PF06080.12 gi|33151458|ref|NP_872811.1| - 0.099 12.4 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Cons_hypoth95 PF03602.15 gi|33151458|ref|NP_872811.1| - 0.12 12.0 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 N6_Mtase PF02384.16 gi|33151458|ref|NP_872811.1| - 0.14 11.4 0.1 0.21 10.8 0.1 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase DNA_III_psi PF03603.13 gi|33151459|ref|NP_872812.1| - 3.1e-34 117.9 9.2 3.4e-34 117.8 9.2 1.0 1 0 0 1 1 1 1 DNA polymerase III psi subunit RuBisCo_chap_C PF18087.1 gi|33151459|ref|NP_872812.1| - 0.042 13.5 0.2 0.051 13.2 0.2 1.1 1 0 0 1 1 1 0 Rubisco Assembly chaperone C-terminal domain SQAPI PF16845.5 gi|33151459|ref|NP_872812.1| - 0.15 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Aspartic acid proteinase inhibitor Acetyltransf_1 PF00583.25 gi|33151460|ref|NP_872813.1| - 3.4e-14 53.1 0.0 4.3e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|33151460|ref|NP_872813.1| - 3.1e-12 46.5 0.0 3.6e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|33151460|ref|NP_872813.1| - 4.6e-10 39.3 0.0 6.5e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 gi|33151460|ref|NP_872813.1| - 5.3e-10 39.6 0.0 6.5e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|33151460|ref|NP_872813.1| - 6.5e-09 36.1 0.1 8.1e-09 35.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|33151460|ref|NP_872813.1| - 4.2e-05 23.2 0.0 4.9e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_15 PF17013.5 gi|33151460|ref|NP_872813.1| - 0.00016 21.2 0.0 0.00027 20.5 0.0 1.3 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|33151460|ref|NP_872813.1| - 0.0002 22.0 0.0 0.00089 19.9 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|33151460|ref|NP_872813.1| - 0.0028 17.7 0.0 0.0058 16.7 0.0 1.6 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 gi|33151460|ref|NP_872813.1| - 0.0084 15.8 0.0 0.01 15.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|33151460|ref|NP_872813.1| - 0.024 14.7 0.0 0.036 14.1 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF2240 PF09999.9 gi|33151460|ref|NP_872813.1| - 0.056 13.1 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) Gly_acyl_tr_C PF08444.10 gi|33151460|ref|NP_872813.1| - 0.14 12.4 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region DEAD PF00270.29 gi|33151461|ref|NP_872814.1| - 3.4e-46 157.2 0.1 1.6e-45 155.1 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|33151461|ref|NP_872814.1| - 4.7e-30 104.2 0.2 8.8e-29 100.1 0.6 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|33151461|ref|NP_872814.1| - 3.3e-09 37.0 0.1 2.2e-08 34.3 0.0 2.2 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|33151461|ref|NP_872814.1| - 4.3e-05 23.9 0.2 0.00013 22.4 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|33151461|ref|NP_872814.1| - 0.37 11.1 2.5 2.3 8.5 1.0 2.8 2 1 0 2 2 2 0 AAA domain APC_u15 PF16636.5 gi|33151461|ref|NP_872814.1| - 1.7 9.1 9.5 3.8 8.0 9.5 1.6 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr regions 5 and 6 Putative_PNPOx PF01243.20 gi|33151462|ref|NP_872815.1| - 8.5e-18 64.3 0.0 1.3e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase PNP_phzG_C PF10590.9 gi|33151462|ref|NP_872815.1| - 3.3e-17 62.3 4.1 7.5e-17 61.1 4.1 1.6 1 0 0 1 1 1 1 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SBP_bac_5 PF00496.22 gi|33151463|ref|NP_872816.1| - 1.8e-105 353.0 9.1 2.3e-105 352.7 9.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BRCA2 PF00634.18 gi|33151463|ref|NP_872816.1| - 0.2 11.4 0.2 0.43 10.3 0.2 1.6 1 0 0 1 1 1 0 BRCA2 repeat Trm112p PF03966.16 gi|33151464|ref|NP_872817.1| - 1.3e-05 25.7 0.0 2.5e-05 24.8 0.0 1.5 1 1 0 1 1 1 1 Trm112p-like protein REF PF05755.12 gi|33151464|ref|NP_872817.1| - 0.12 12.2 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) LpxK PF02606.14 gi|33151465|ref|NP_872818.1| - 6.1e-114 380.5 0.0 7.3e-114 380.2 0.0 1.0 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase MobB PF03205.14 gi|33151465|ref|NP_872818.1| - 0.0066 16.3 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_2 PF07724.14 gi|33151466|ref|NP_872819.1| - 1.6e-45 155.2 0.0 2.4e-45 154.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 gi|33151466|ref|NP_872819.1| - 4.4e-17 62.7 0.0 1.1e-16 61.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 gi|33151466|ref|NP_872819.1| - 1.2e-15 57.3 0.3 3.4e-15 55.8 0.3 1.8 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein zf-C4_ClpX PF06689.13 gi|33151466|ref|NP_872819.1| - 7.3e-13 48.2 3.2 1.8e-12 46.9 3.2 1.7 1 0 0 1 1 1 1 ClpX C4-type zinc finger RuvB_N PF05496.12 gi|33151466|ref|NP_872819.1| - 7e-07 29.1 1.2 1.3e-05 25.0 1.2 2.8 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|33151466|ref|NP_872819.1| - 1e-06 28.8 0.1 3.3e-06 27.1 0.1 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|33151466|ref|NP_872819.1| - 1.5e-06 27.8 0.2 0.0013 18.1 0.1 3.1 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|33151466|ref|NP_872819.1| - 1.2e-05 25.6 0.2 0.00014 22.1 0.2 2.4 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|33151466|ref|NP_872819.1| - 2.4e-05 24.9 0.0 6.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33151466|ref|NP_872819.1| - 3.4e-05 24.3 0.2 0.00027 21.4 0.1 2.1 1 1 1 2 2 2 1 AAA ATPase domain MCM PF00493.23 gi|33151466|ref|NP_872819.1| - 8.8e-05 21.7 0.0 0.00019 20.6 0.0 1.5 1 0 0 1 1 1 1 MCM P-loop domain AAA_7 PF12775.7 gi|33151466|ref|NP_872819.1| - 0.00018 21.1 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|33151466|ref|NP_872819.1| - 0.00021 21.0 0.0 0.052 13.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_14 PF13173.6 gi|33151466|ref|NP_872819.1| - 0.00032 20.7 0.0 0.0008 19.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|33151466|ref|NP_872819.1| - 0.0025 17.6 0.0 0.0059 16.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|33151466|ref|NP_872819.1| - 0.0038 17.0 0.0 0.0068 16.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein T2SSE PF00437.20 gi|33151466|ref|NP_872819.1| - 0.0045 16.1 0.0 0.0071 15.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein TsaE PF02367.17 gi|33151466|ref|NP_872819.1| - 0.0046 17.0 0.0 0.0085 16.1 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 gi|33151466|ref|NP_872819.1| - 0.0048 17.1 0.0 0.0095 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|33151466|ref|NP_872819.1| - 0.01 16.4 0.2 0.04 14.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|33151466|ref|NP_872819.1| - 0.011 16.1 0.4 0.14 12.5 0.4 2.3 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33151466|ref|NP_872819.1| - 0.012 15.5 0.0 0.2 11.6 0.0 2.3 2 0 0 2 2 2 0 NACHT domain TIP49 PF06068.13 gi|33151466|ref|NP_872819.1| - 0.015 14.6 0.1 0.056 12.6 0.0 1.9 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_28 PF13521.6 gi|33151466|ref|NP_872819.1| - 0.024 14.9 0.0 0.041 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 gi|33151466|ref|NP_872819.1| - 0.043 13.6 0.2 0.49 10.1 0.1 2.3 1 1 0 2 2 2 0 DEAD/DEAH box helicase PhoH PF02562.16 gi|33151466|ref|NP_872819.1| - 0.047 13.1 0.0 0.12 11.8 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein Sigma54_activ_2 PF14532.6 gi|33151466|ref|NP_872819.1| - 0.048 13.8 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|33151466|ref|NP_872819.1| - 0.053 13.9 0.0 0.099 13.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.15 gi|33151466|ref|NP_872819.1| - 0.054 13.5 0.0 0.17 11.9 0.0 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 gi|33151466|ref|NP_872819.1| - 0.055 14.0 0.0 0.12 12.9 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 gi|33151466|ref|NP_872819.1| - 0.087 12.6 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|33151466|ref|NP_872819.1| - 0.11 12.3 0.1 0.37 10.5 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_3 PF07726.11 gi|33151466|ref|NP_872819.1| - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 gi|33151466|ref|NP_872819.1| - 0.15 12.2 0.1 0.63 10.1 0.0 2.1 3 0 0 3 3 2 0 Shikimate kinase DUF2075 PF09848.9 gi|33151466|ref|NP_872819.1| - 0.19 11.0 0.0 0.28 10.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) CLP_protease PF00574.23 gi|33151467|ref|NP_872820.1| - 7.8e-88 293.1 0.0 9e-88 292.9 0.0 1.0 1 0 0 1 1 1 1 Clp protease SufE PF02657.15 gi|33151468|ref|NP_872821.1| - 4.3e-29 100.9 0.2 5.1e-29 100.6 0.2 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain RNase_T PF00929.24 gi|33151469|ref|NP_872822.1| - 1.3e-38 133.1 0.0 1.8e-38 132.6 0.0 1.2 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 gi|33151469|ref|NP_872822.1| - 5.7e-09 36.2 0.0 9.3e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like DNA_pol_A_exo1 PF01612.20 gi|33151469|ref|NP_872822.1| - 0.0023 17.7 0.0 0.065 12.9 0.0 2.8 2 1 1 3 3 3 1 3'-5' exonuclease ABC_tran PF00005.27 gi|33151470|ref|NP_872823.1| - 8.7e-58 194.7 0.1 2.7e-30 105.7 0.0 3.2 3 0 0 3 3 3 2 ABC transporter ABC_tran_Xtn PF12848.7 gi|33151470|ref|NP_872823.1| - 1.1e-16 60.6 8.5 9e-14 51.3 3.5 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|33151470|ref|NP_872823.1| - 1.2e-16 61.4 4.7 8.8e-05 22.5 0.0 4.4 3 1 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33151470|ref|NP_872823.1| - 6.5e-08 32.3 0.4 0.29 10.5 0.0 4.1 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|33151470|ref|NP_872823.1| - 2.1e-06 27.8 0.2 0.02 15.0 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|33151470|ref|NP_872823.1| - 4.2e-05 23.5 0.2 0.014 15.3 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|33151470|ref|NP_872823.1| - 4.4e-05 23.1 1.9 0.037 13.8 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|33151470|ref|NP_872823.1| - 8.7e-05 23.1 0.0 0.83 10.2 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|33151470|ref|NP_872823.1| - 0.00013 22.3 0.8 0.55 10.5 0.1 3.3 2 2 0 2 2 2 2 AAA domain MeaB PF03308.16 gi|33151470|ref|NP_872823.1| - 0.00087 18.4 0.3 0.84 8.6 0.0 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB SbcCD_C PF13558.6 gi|33151470|ref|NP_872823.1| - 0.0013 18.9 1.0 4.9 7.5 0.0 4.1 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 gi|33151470|ref|NP_872823.1| - 0.0014 19.2 11.1 0.013 16.1 0.1 3.1 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|33151470|ref|NP_872823.1| - 0.0019 18.3 1.5 0.58 10.3 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|33151470|ref|NP_872823.1| - 0.0021 18.5 8.4 3.4 8.0 0.0 3.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_27 PF13514.6 gi|33151470|ref|NP_872823.1| - 0.0052 16.4 0.1 1.3 8.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|33151470|ref|NP_872823.1| - 0.0062 16.8 2.7 0.17 12.1 0.0 3.2 3 1 0 3 3 3 1 AAA domain Roc PF08477.13 gi|33151470|ref|NP_872823.1| - 0.0076 16.5 0.2 3.4 7.9 0.0 2.8 3 0 0 3 3 2 1 Ras of Complex, Roc, domain of DAPkinase DLIC PF05783.11 gi|33151470|ref|NP_872823.1| - 0.0079 15.1 0.1 0.64 8.8 0.0 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) ATP-synt_ab PF00006.25 gi|33151470|ref|NP_872823.1| - 0.0094 15.6 0.0 0.12 12.0 0.0 2.2 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Arf PF00025.21 gi|33151470|ref|NP_872823.1| - 0.01 15.3 0.1 1.2 8.5 0.0 2.4 2 0 0 2 2 2 0 ADP-ribosylation factor family Dynamin_N PF00350.23 gi|33151470|ref|NP_872823.1| - 0.01 15.9 1.0 0.59 10.2 0.0 3.0 4 0 0 4 4 4 0 Dynamin family AAA_14 PF13173.6 gi|33151470|ref|NP_872823.1| - 0.011 15.7 0.0 5 7.2 0.0 3.3 3 1 0 3 3 2 0 AAA domain cobW PF02492.19 gi|33151470|ref|NP_872823.1| - 0.016 14.8 0.7 1.1 8.8 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 gi|33151470|ref|NP_872823.1| - 0.016 14.8 2.1 8.2 6.0 0.1 3.8 4 1 0 4 4 4 0 AAA domain AAA_24 PF13479.6 gi|33151470|ref|NP_872823.1| - 0.043 13.6 0.2 6.4 6.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|33151470|ref|NP_872823.1| - 0.047 13.4 0.3 1.8 8.2 0.0 2.7 2 1 0 3 3 3 0 AAA ATPase domain MRP-L46 PF11788.8 gi|33151470|ref|NP_872823.1| - 0.052 14.3 1.3 0.12 13.1 1.3 1.6 1 0 0 1 1 1 0 39S mitochondrial ribosomal protein L46 NB-ARC PF00931.22 gi|33151470|ref|NP_872823.1| - 0.053 12.7 1.7 2.5 7.2 0.0 3.1 3 0 0 3 3 3 0 NB-ARC domain HAUS4 PF14735.6 gi|33151470|ref|NP_872823.1| - 0.062 13.0 0.2 0.13 12.0 0.2 1.5 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 4 Zeta_toxin PF06414.12 gi|33151470|ref|NP_872823.1| - 0.073 12.3 0.1 1.3 8.3 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 gi|33151470|ref|NP_872823.1| - 0.16 11.6 2.5 3.1 7.4 0.0 2.8 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_13 PF13166.6 gi|33151470|ref|NP_872823.1| - 0.25 9.9 10.1 1.2 7.6 0.0 3.6 3 1 0 4 4 4 0 AAA domain DUF87 PF01935.17 gi|33151470|ref|NP_872823.1| - 2.9 7.9 6.1 51 3.8 0.2 3.4 3 0 0 3 3 3 0 Helicase HerA, central domain UPF0004 PF00919.20 gi|33151471|ref|NP_872824.1| - 3.2e-29 100.8 0.0 6.2e-29 99.9 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 gi|33151471|ref|NP_872824.1| - 3.3e-27 95.9 0.1 5.5e-27 95.2 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 gi|33151471|ref|NP_872824.1| - 1.6e-19 69.6 0.1 4e-19 68.4 0.1 1.7 2 0 0 2 2 2 1 TRAM domain TRAM_2 PF18693.1 gi|33151471|ref|NP_872824.1| - 0.0022 18.1 0.1 0.009 16.2 0.1 2.0 1 1 0 1 1 1 1 TRAM domain Amdase PF17645.1 gi|33151471|ref|NP_872824.1| - 0.19 11.3 0.0 0.38 10.3 0.0 1.4 1 0 0 1 1 1 0 Arylmalonate decarboxylase PTS_EIIA_1 PF00358.20 gi|33151472|ref|NP_872825.1| - 1.1e-46 157.7 1.4 1.5e-46 157.3 1.4 1.1 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Biotin_lipoyl_2 PF13533.6 gi|33151472|ref|NP_872825.1| - 0.00021 21.1 1.0 0.0096 15.7 0.1 2.8 3 0 0 3 3 3 1 Biotin-lipoyl like RnfC_N PF13375.6 gi|33151472|ref|NP_872825.1| - 0.0064 16.4 4.0 0.038 13.9 0.1 3.1 2 2 1 3 3 3 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 gi|33151472|ref|NP_872825.1| - 0.026 14.4 2.9 4.6 7.1 0.0 3.6 4 0 0 4 4 4 0 Biotin-requiring enzyme Peptidase_M23 PF01551.22 gi|33151472|ref|NP_872825.1| - 0.058 13.6 3.0 2.1 8.6 0.5 3.2 1 1 1 3 3 3 0 Peptidase family M23 PEP-utilizers_C PF02896.18 gi|33151473|ref|NP_872826.1| - 3.7e-121 403.8 0.1 5.2e-121 403.3 0.1 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 gi|33151473|ref|NP_872826.1| - 2e-27 95.7 3.5 2e-27 95.7 3.5 3.0 4 0 0 4 4 4 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 gi|33151473|ref|NP_872826.1| - 1.8e-23 82.0 0.1 6.2e-23 80.3 0.1 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 gi|33151473|ref|NP_872826.1| - 2.1e-05 23.8 0.1 5.1e-05 22.5 0.1 1.6 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family SWC7 PF17330.2 gi|33151473|ref|NP_872826.1| - 0.029 14.4 0.4 0.97 9.5 0.1 2.8 2 0 0 2 2 2 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 PTS-HPr PF00381.19 gi|33151474|ref|NP_872827.1| - 4e-26 91.1 0.0 4.3e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site SPOUT_MTase_2 PF14419.6 gi|33151474|ref|NP_872827.1| - 0.17 11.2 0.0 0.5 9.7 0.0 1.6 1 1 1 2 2 2 0 AF2226-like SPOUT RNA Methylase fused to THUMP BPD_transp_1 PF00528.22 gi|33151475|ref|NP_872828.1| - 6.3e-10 39.1 49.6 9.9e-07 28.7 15.7 3.6 3 1 1 4 4 4 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|33151476|ref|NP_872829.1| - 1.8e-33 115.9 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33151476|ref|NP_872829.1| - 3.8e-09 36.8 0.2 1.6e-05 24.8 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33151476|ref|NP_872829.1| - 1.4e-07 31.2 0.1 4.1e-06 26.4 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|33151476|ref|NP_872829.1| - 1.8e-05 24.7 0.1 4.6e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|33151476|ref|NP_872829.1| - 8.8e-05 22.6 0.1 0.00032 20.8 0.0 1.8 2 1 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 gi|33151476|ref|NP_872829.1| - 0.0004 20.4 0.0 0.00095 19.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase NACHT PF05729.12 gi|33151476|ref|NP_872829.1| - 0.0026 17.7 2.0 0.091 12.7 0.0 2.1 2 0 0 2 2 2 1 NACHT domain AAA_29 PF13555.6 gi|33151476|ref|NP_872829.1| - 0.0048 16.6 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|33151476|ref|NP_872829.1| - 0.0066 16.8 1.3 0.017 15.5 1.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.6 gi|33151476|ref|NP_872829.1| - 0.0071 16.6 0.3 0.15 12.3 0.1 2.6 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|33151476|ref|NP_872829.1| - 0.0073 16.6 0.6 0.023 14.9 0.6 1.9 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 gi|33151476|ref|NP_872829.1| - 0.031 14.3 0.0 0.072 13.2 0.0 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 gi|33151476|ref|NP_872829.1| - 0.045 13.5 0.7 0.17 11.6 0.0 2.0 2 1 0 2 2 2 0 AAA domain MeaB PF03308.16 gi|33151476|ref|NP_872829.1| - 0.058 12.4 0.0 0.14 11.1 0.0 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 gi|33151476|ref|NP_872829.1| - 0.068 13.7 0.2 0.08 13.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|33151476|ref|NP_872829.1| - 0.072 12.4 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|33151476|ref|NP_872829.1| - 0.072 12.0 0.0 0.11 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain Septin PF00735.18 gi|33151476|ref|NP_872829.1| - 0.092 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Septin ATPase PF06745.13 gi|33151476|ref|NP_872829.1| - 0.094 12.1 0.2 7.6 5.8 0.1 2.2 2 0 0 2 2 2 0 KaiC AAA_24 PF13479.6 gi|33151476|ref|NP_872829.1| - 0.11 12.2 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain IIGP PF05049.13 gi|33151476|ref|NP_872829.1| - 0.14 11.2 0.0 0.24 10.4 0.0 1.3 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) cobW PF02492.19 gi|33151476|ref|NP_872829.1| - 0.19 11.3 0.4 1.2 8.7 0.2 2.2 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Sigma54_AID PF00309.20 gi|33151476|ref|NP_872829.1| - 3 7.8 8.7 0.46 10.4 0.4 2.8 3 0 0 3 3 3 0 Sigma-54 factor, Activator interacting domain (AID) OTCace PF00185.24 gi|33151477|ref|NP_872830.1| - 6.2e-49 166.1 0.2 1.3e-48 165.0 0.1 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|33151477|ref|NP_872830.1| - 1.7e-47 161.2 0.1 2.6e-47 160.5 0.1 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TetR_N PF00440.23 gi|33151477|ref|NP_872830.1| - 0.11 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family CPSase_L_D2 PF02786.17 gi|33151478|ref|NP_872831.1| - 3e-113 376.5 0.2 1.7e-73 246.6 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|33151478|ref|NP_872831.1| - 1.5e-40 138.3 0.0 3.8e-40 137.0 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|33151478|ref|NP_872831.1| - 1.2e-20 73.4 0.7 2.5e-19 69.3 0.3 3.0 3 0 0 3 3 3 1 MGS-like domain ATP-grasp PF02222.22 gi|33151478|ref|NP_872831.1| - 6.5e-14 51.9 0.2 2.2e-07 30.6 0.1 2.8 3 0 0 3 3 3 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|33151478|ref|NP_872831.1| - 2.7e-13 49.9 0.1 5.8e-08 32.5 0.1 2.4 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|33151478|ref|NP_872831.1| - 3e-13 50.1 0.1 2.1e-09 37.6 0.1 2.6 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|33151478|ref|NP_872831.1| - 7.3e-12 45.2 0.6 7.3e-08 32.2 0.1 2.8 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.11 gi|33151478|ref|NP_872831.1| - 3.6e-10 39.8 0.0 3.4e-06 26.8 0.1 3.3 3 0 0 3 3 3 2 RimK-like ATP-grasp domain ATP-grasp_5 PF13549.6 gi|33151478|ref|NP_872831.1| - 5.2e-06 26.1 0.0 0.0015 18.0 0.0 2.7 2 0 0 2 2 2 1 ATP-grasp domain B12-binding PF02310.19 gi|33151478|ref|NP_872831.1| - 0.00012 22.1 0.0 2.8 8.0 0.0 4.1 3 1 0 3 3 3 2 B12 binding domain ATP-grasp_2 PF08442.10 gi|33151478|ref|NP_872831.1| - 0.0012 18.4 0.0 0.96 9.0 0.0 3.1 2 1 0 2 2 2 2 ATP-grasp domain Isochorismatase PF00857.20 gi|33151478|ref|NP_872831.1| - 0.073 13.2 0.1 3 8.0 0.1 2.7 2 0 0 2 2 2 0 Isochorismatase family TIR_2 PF13676.6 gi|33151478|ref|NP_872831.1| - 0.083 13.5 0.0 1.8 9.2 0.0 3.3 3 1 0 3 3 3 0 TIR domain Glyco_trans_4_2 PF13477.6 gi|33151478|ref|NP_872831.1| - 0.11 12.5 0.0 7 6.7 0.0 3.3 2 2 0 2 2 2 0 Glycosyl transferase 4-like CPSase_sm_chain PF00988.22 gi|33151479|ref|NP_872832.1| - 1e-50 170.8 0.1 1.6e-50 170.2 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|33151479|ref|NP_872832.1| - 2.1e-46 158.1 0.1 4.1e-46 157.1 0.1 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|33151479|ref|NP_872832.1| - 7.7e-07 29.1 0.6 1.5e-05 24.9 0.5 2.5 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|33151479|ref|NP_872832.1| - 0.0046 16.8 0.0 0.0089 15.9 0.0 1.5 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|33151479|ref|NP_872832.1| - 0.059 12.9 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain PSI_PsaH PF03244.14 gi|33151479|ref|NP_872832.1| - 0.16 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VI DcuA_DcuB PF03605.14 gi|33151481|ref|NP_872834.1| - 3.6e-142 473.6 22.6 4.3e-142 473.4 22.6 1.0 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter Methyltransf_5 PF01795.19 gi|33151483|ref|NP_872836.1| - 7.5e-119 396.8 0.0 8.5e-119 396.6 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_31 PF13847.6 gi|33151483|ref|NP_872836.1| - 0.00013 21.8 0.0 0.42 10.4 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33151483|ref|NP_872836.1| - 0.0032 18.1 0.0 4.8 8.0 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase domain Ubie_methyltran PF01209.18 gi|33151483|ref|NP_872836.1| - 0.021 14.1 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|33151483|ref|NP_872836.1| - 0.033 14.8 0.0 0.57 10.9 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain OSCP PF00213.18 gi|33151483|ref|NP_872836.1| - 0.048 13.8 0.4 0.078 13.1 0.4 1.3 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit FtsJ PF01728.19 gi|33151483|ref|NP_872836.1| - 0.054 13.6 0.0 0.41 10.7 0.0 2.0 1 1 0 1 1 1 0 FtsJ-like methyltransferase FtsL PF04999.13 gi|33151484|ref|NP_872837.1| - 1.2e-29 102.1 3.3 1.3e-29 102.0 3.3 1.0 1 0 0 1 1 1 1 Cell division protein FtsL SIT PF15330.6 gi|33151484|ref|NP_872837.1| - 0.036 14.5 0.2 0.047 14.1 0.2 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT GAPT PF11770.8 gi|33151484|ref|NP_872837.1| - 0.036 13.9 0.1 0.043 13.7 0.1 1.2 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) Transpeptidase PF00905.22 gi|33151485|ref|NP_872838.1| - 1.8e-79 267.1 0.0 2.6e-79 266.6 0.0 1.3 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 gi|33151485|ref|NP_872838.1| - 1.5e-17 64.5 1.2 4.3e-16 59.8 1.2 3.0 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain NusA_N PF08529.11 gi|33151485|ref|NP_872838.1| - 0.043 14.2 0.1 0.11 12.8 0.1 1.7 1 0 0 1 1 1 0 NusA N-terminal domain SmaI PF17411.2 gi|33151485|ref|NP_872838.1| - 0.092 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Type II site-specific deoxyribonuclease Mur_ligase_M PF08245.12 gi|33151486|ref|NP_872839.1| - 1.2e-49 168.9 0.6 1.2e-49 168.9 0.6 2.1 2 0 0 2 2 2 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|33151486|ref|NP_872839.1| - 3.8e-22 78.3 0.1 7.4e-21 74.2 0.0 2.7 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 gi|33151486|ref|NP_872839.1| - 5.7e-16 58.6 0.1 2.7e-15 56.5 0.0 2.2 2 0 0 2 2 2 1 Mur ligase family, catalytic domain tRNA_lig_kinase PF08303.11 gi|33151486|ref|NP_872839.1| - 0.0036 17.4 0.2 0.013 15.6 0.0 1.9 2 0 0 2 2 2 1 tRNA ligase kinase domain HyaE PF07449.11 gi|33151486|ref|NP_872839.1| - 0.06 13.3 0.1 2.3 8.2 0.0 2.6 2 0 0 2 2 2 0 Hydrogenase-1 expression protein HyaE Mur_ligase_M PF08245.12 gi|33151487|ref|NP_872840.1| - 7.5e-46 156.5 1.1 2.3e-45 155.0 0.1 2.2 3 0 0 3 3 3 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|33151487|ref|NP_872840.1| - 7.3e-13 48.6 0.0 1.2e-11 44.7 0.0 2.5 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 gi|33151487|ref|NP_872840.1| - 1.7e-05 25.1 0.0 9.4e-05 22.7 0.1 2.2 2 1 0 2 2 2 1 Mur ligase family, catalytic domain Pribosyl_synth PF14572.6 gi|33151487|ref|NP_872840.1| - 0.027 14.5 0.2 0.064 13.3 0.1 1.7 2 0 0 2 2 2 0 Phosphoribosyl synthetase-associated domain Glycos_transf_4 PF00953.21 gi|33151488|ref|NP_872841.1| - 1.8e-36 125.5 17.1 1.8e-36 125.5 17.1 2.1 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 gi|33151488|ref|NP_872841.1| - 1e-05 24.8 3.3 1e-05 24.8 3.3 2.6 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DUF3464 PF11947.8 gi|33151488|ref|NP_872841.1| - 3.1 7.5 6.7 0.71 9.6 0.6 2.5 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 Mur_ligase_M PF08245.12 gi|33151489|ref|NP_872842.1| - 1.2e-29 103.7 0.1 1.9e-29 103.0 0.1 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|33151489|ref|NP_872842.1| - 1.1e-07 31.9 0.0 1.8e-06 28.1 0.0 2.9 4 0 0 4 4 4 1 Mur ligase family, glutamate ligase domain NAD_binding_7 PF13241.6 gi|33151489|ref|NP_872842.1| - 0.0084 16.5 0.0 0.023 15.1 0.0 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|33151489|ref|NP_872842.1| - 0.03 13.9 0.1 0.15 11.6 0.0 2.0 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|33151489|ref|NP_872842.1| - 0.098 12.9 0.1 1.2 9.4 0.0 2.7 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_8 PF13450.6 gi|33151489|ref|NP_872842.1| - 0.12 12.6 0.0 0.33 11.2 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FTSW_RODA_SPOVE PF01098.19 gi|33151490|ref|NP_872843.1| - 1.3e-114 382.9 24.1 1.5e-114 382.7 24.1 1.0 1 0 0 1 1 1 1 Cell cycle protein DUF2721 PF11026.8 gi|33151490|ref|NP_872843.1| - 0.066 13.1 0.6 0.066 13.1 0.6 4.7 4 2 0 5 5 5 0 Protein of unknown function (DUF2721) Thioredoxin_9 PF14595.6 gi|33151491|ref|NP_872844.1| - 8.6e-33 112.9 0.4 1e-32 112.6 0.4 1.0 1 0 0 1 1 1 1 Thioredoxin DUF3088 PF11287.8 gi|33151491|ref|NP_872844.1| - 0.035 13.9 0.0 0.069 12.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3088) Peptidase_M24 PF00557.24 gi|33151492|ref|NP_872845.1| - 2.4e-50 171.1 1.2 2.8e-50 170.9 1.2 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Arch_flagellin PF01917.16 gi|33151492|ref|NP_872845.1| - 0.082 13.1 0.0 3.7 7.7 0.0 2.1 2 0 0 2 2 2 0 Archaebacterial flagellin Vut_1 PF02592.15 gi|33151493|ref|NP_872846.1| - 2.1e-37 128.8 17.8 2.1e-37 128.8 17.8 1.8 2 0 0 2 2 2 1 Putative vitamin uptake transporter DUF4407 PF14362.6 gi|33151493|ref|NP_872846.1| - 1.9 7.7 5.2 3.4 6.9 5.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4229 PF14012.6 gi|33151493|ref|NP_872846.1| - 9.9 6.3 13.1 5.5 7.2 0.4 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF4229) EPSP_synthase PF00275.20 gi|33151494|ref|NP_872847.1| - 2.6e-126 421.7 5.8 3e-126 421.5 5.8 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAP18_C PF12153.8 gi|33151494|ref|NP_872847.1| - 0.014 15.3 1.1 0.042 13.7 1.1 1.8 1 0 0 1 1 1 0 LPS binding domain of CAP18 (C terminal) DUF520 PF04461.13 gi|33151494|ref|NP_872847.1| - 0.02 15.0 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF520) BolA PF01722.18 gi|33151495|ref|NP_872848.1| - 6.7e-12 45.5 0.1 8.2e-12 45.2 0.1 1.2 1 0 0 1 1 1 1 BolA-like protein YjcZ PF13990.6 gi|33151495|ref|NP_872848.1| - 0.047 13.1 0.1 0.052 12.9 0.1 1.0 1 0 0 1 1 1 0 YjcZ-like protein STAS_2 PF13466.6 gi|33151496|ref|NP_872849.1| - 1.5e-13 50.8 0.0 1.8e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 STAS domain STAS PF01740.21 gi|33151496|ref|NP_872849.1| - 0.00062 19.4 0.0 0.00062 19.4 0.0 1.1 1 0 0 1 1 1 1 STAS domain DUF4660 PF15559.6 gi|33151496|ref|NP_872849.1| - 0.031 14.6 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4660) MlaC PF05494.12 gi|33151497|ref|NP_872850.1| - 3.1e-50 170.2 2.8 3.6e-50 170.0 2.8 1.1 1 0 0 1 1 1 1 MlaC protein MlaD PF02470.20 gi|33151498|ref|NP_872851.1| - 5.8e-20 71.4 0.2 8.3e-20 70.9 0.2 1.2 1 0 0 1 1 1 1 MlaD protein MlaE PF02405.16 gi|33151499|ref|NP_872852.1| - 5.6e-73 245.1 17.0 6.5e-73 244.9 17.0 1.0 1 0 0 1 1 1 1 Permease MlaE ABC_tran PF00005.27 gi|33151500|ref|NP_872853.1| - 5.9e-28 98.1 0.0 8.1e-28 97.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|33151500|ref|NP_872853.1| - 6.4e-05 22.9 0.0 0.0001 22.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 gi|33151500|ref|NP_872853.1| - 0.0009 19.1 0.5 0.14 11.9 0.2 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|33151500|ref|NP_872853.1| - 0.0017 18.8 0.0 0.0024 18.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|33151500|ref|NP_872853.1| - 0.0022 18.3 0.0 0.0045 17.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|33151500|ref|NP_872853.1| - 0.0057 17.2 0.1 0.0093 16.5 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33151500|ref|NP_872853.1| - 0.0093 15.7 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|33151500|ref|NP_872853.1| - 0.0098 14.7 0.4 0.76 8.5 0.1 2.2 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_24 PF13479.6 gi|33151500|ref|NP_872853.1| - 0.029 14.1 0.3 0.051 13.3 0.3 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|33151500|ref|NP_872853.1| - 0.05 12.8 0.0 0.07 12.3 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|33151500|ref|NP_872853.1| - 0.076 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|33151500|ref|NP_872853.1| - 0.085 13.3 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|33151500|ref|NP_872853.1| - 0.097 13.0 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33151500|ref|NP_872853.1| - 0.13 12.2 0.2 0.31 10.9 0.2 1.7 1 0 0 1 1 1 0 NACHT domain Rad17 PF03215.15 gi|33151500|ref|NP_872853.1| - 0.15 11.9 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_25 PF13481.6 gi|33151500|ref|NP_872853.1| - 0.16 11.6 0.0 0.46 10.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain BCA_ABC_TP_C PF12399.8 gi|33151500|ref|NP_872853.1| - 0.23 11.4 0.9 2.6 8.1 0.9 2.3 1 1 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter Trypsin_2 PF13365.6 gi|33151501|ref|NP_872854.1| - 2.2e-29 103.3 0.0 3.7e-29 102.5 0.0 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 gi|33151501|ref|NP_872854.1| - 2.6e-23 82.2 8.5 3.8e-14 52.8 0.7 3.0 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 gi|33151501|ref|NP_872854.1| - 3e-22 78.7 0.4 2.1e-14 53.6 0.1 2.5 2 0 0 2 2 2 2 PDZ domain Trypsin PF00089.26 gi|33151501|ref|NP_872854.1| - 2.7e-18 66.6 0.0 4.9e-18 65.7 0.0 1.4 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 gi|33151501|ref|NP_872854.1| - 1.4e-17 63.3 2.0 9.4e-10 38.2 0.0 2.8 3 0 0 3 3 3 2 PDZ domain Peptidase_S46 PF10459.9 gi|33151501|ref|NP_872854.1| - 0.0082 14.9 0.2 0.2 10.2 0.7 2.0 2 0 0 2 2 2 1 Peptidase S46 LSM PF01423.22 gi|33151501|ref|NP_872854.1| - 0.045 13.4 0.0 0.097 12.4 0.0 1.5 1 0 0 1 1 1 0 LSM domain Peptidase_S29 PF02907.15 gi|33151501|ref|NP_872854.1| - 0.05 13.4 0.0 0.13 12.0 0.0 1.7 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease DUF150_C PF17384.2 gi|33151501|ref|NP_872854.1| - 0.17 12.0 1.1 0.75 10.0 0.2 2.3 2 0 0 2 2 2 0 RimP C-terminal SH3 domain Epimerase PF01370.21 gi|33151502|ref|NP_872855.1| - 4.5e-21 75.4 0.0 6.6e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1731 PF08338.11 gi|33151502|ref|NP_872855.1| - 1.2e-13 50.6 2.4 3.8e-13 49.0 1.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1731) GDP_Man_Dehyd PF16363.5 gi|33151502|ref|NP_872855.1| - 1.9e-07 30.8 0.1 8.3e-06 25.4 0.1 2.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|33151502|ref|NP_872855.1| - 7.9e-06 25.2 1.6 0.0027 16.9 1.0 2.8 1 1 1 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.17 gi|33151502|ref|NP_872855.1| - 2.7e-05 23.4 0.0 6.7e-05 22.1 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|33151502|ref|NP_872855.1| - 0.00012 21.7 0.1 0.00043 19.9 0.0 1.8 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 gi|33151502|ref|NP_872855.1| - 0.00016 21.7 0.1 0.0002 21.3 0.1 1.3 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|33151502|ref|NP_872855.1| - 0.0061 16.5 0.4 0.019 14.9 0.3 1.7 1 1 1 2 2 2 1 KR domain Polysacc_synt_2 PF02719.15 gi|33151502|ref|NP_872855.1| - 0.012 14.7 0.0 0.47 9.5 0.0 2.1 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|33151502|ref|NP_872855.1| - 0.032 13.3 0.0 0.046 12.7 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.25 gi|33151502|ref|NP_872855.1| - 0.033 13.6 0.3 0.089 12.2 0.3 1.8 1 1 1 2 2 2 0 short chain dehydrogenase F420_oxidored PF03807.17 gi|33151502|ref|NP_872855.1| - 0.077 13.6 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Arg_repressor_C PF02863.18 gi|33151503|ref|NP_872856.1| - 4.2e-22 77.8 0.2 5.8e-22 77.3 0.2 1.2 1 0 0 1 1 1 1 Arginine repressor, C-terminal domain Arg_repressor PF01316.21 gi|33151503|ref|NP_872856.1| - 2.9e-20 71.8 0.2 4.1e-20 71.3 0.2 1.3 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain Ldh_1_N PF00056.23 gi|33151504|ref|NP_872857.1| - 2.1e-41 141.3 0.5 6.6e-41 139.7 0.4 1.9 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|33151504|ref|NP_872857.1| - 1.8e-40 138.6 0.0 2.7e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|33151504|ref|NP_872857.1| - 0.093 12.3 0.1 3.7 7.0 0.2 2.3 1 1 1 2 2 2 0 Family 4 glycosyl hydrolase Rick_17kDa_Anti PF05433.15 gi|33151505|ref|NP_872858.1| - 9.3e-10 38.2 26.7 1.5e-09 37.5 26.7 1.4 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 gi|33151505|ref|NP_872858.1| - 0.0005 20.0 23.4 0.00096 19.1 23.4 1.5 1 0 0 1 1 1 1 Glycine zipper TraT PF05818.12 gi|33151505|ref|NP_872858.1| - 0.009 15.7 5.7 0.011 15.4 5.7 1.2 1 0 0 1 1 1 1 Enterobacterial TraT complement resistance protein Bacteriocin_IIc PF10439.9 gi|33151505|ref|NP_872858.1| - 0.13 12.4 18.1 0.29 11.3 18.1 1.6 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_YMGG PF13441.6 gi|33151505|ref|NP_872858.1| - 0.2 11.4 28.6 0.45 10.3 28.4 1.7 1 1 0 1 1 1 0 YMGG-like Gly-zipper Gly-zipper_OmpA PF13436.6 gi|33151505|ref|NP_872858.1| - 1.1 9.1 29.1 0.41 10.5 4.4 2.3 1 1 1 2 2 2 0 Glycine-zipper domain YecM PF06185.12 gi|33151506|ref|NP_872859.1| - 2.7e-65 219.4 0.9 3.1e-65 219.2 0.9 1.0 1 0 0 1 1 1 1 YecM protein tRNA-synt_1d PF00750.19 gi|161511522|ref|NP_872860.2| - 6.9e-161 535.0 1.4 9.7e-161 534.5 1.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|161511522|ref|NP_872860.2| - 3e-35 121.0 0.4 6.8e-35 119.8 0.4 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|161511522|ref|NP_872860.2| - 1.2e-23 83.5 0.6 4e-23 81.8 0.6 2.0 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 gi|161511522|ref|NP_872860.2| - 0.00093 18.6 0.1 0.0018 17.7 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|161511522|ref|NP_872860.2| - 0.0035 16.1 0.1 0.0058 15.4 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|161511522|ref|NP_872860.2| - 0.013 13.8 0.0 0.018 13.3 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) GTP1_OBG PF01018.22 gi|33151508|ref|NP_872861.1| - 6.5e-57 191.5 4.6 9.5e-57 190.9 4.6 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 gi|33151508|ref|NP_872861.1| - 2.4e-23 82.4 0.0 4.9e-23 81.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|33151508|ref|NP_872861.1| - 1.5e-07 31.1 0.0 7.5e-07 28.8 0.0 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B Ras PF00071.22 gi|33151508|ref|NP_872861.1| - 0.0001 22.0 0.0 0.00018 21.1 0.0 1.4 1 0 0 1 1 1 1 Ras family MeaB PF03308.16 gi|33151508|ref|NP_872861.1| - 0.0031 16.5 0.4 1.5 7.7 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 gi|33151508|ref|NP_872861.1| - 0.01 15.8 0.1 0.046 13.6 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|33151508|ref|NP_872861.1| - 0.012 15.6 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain ATP_bind_1 PF03029.17 gi|33151508|ref|NP_872861.1| - 0.015 15.1 0.0 1.4 8.7 0.0 2.1 1 1 0 2 2 2 0 Conserved hypothetical ATP binding protein SpoU_methylase PF00588.19 gi|33151509|ref|NP_872862.1| - 6.9e-39 133.3 0.0 1.2e-38 132.5 0.0 1.4 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 gi|33151509|ref|NP_872862.1| - 3.5e-20 72.0 0.3 4.1e-19 68.6 0.3 2.2 2 0 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding Asp_Glu_race PF01177.22 gi|33151509|ref|NP_872862.1| - 0.068 13.0 0.6 0.12 12.2 0.5 1.5 1 1 0 1 1 1 0 Asp/Glu/Hydantoin racemase PLDc_2 PF13091.6 gi|33151510|ref|NP_872863.1| - 9.8e-28 96.7 0.0 2.9e-17 62.8 0.0 2.4 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 gi|33151510|ref|NP_872863.1| - 2.5e-12 46.4 0.5 1.4e-06 28.2 0.0 2.4 2 0 0 2 2 2 2 Phospholipase D Active site motif CLTH PF10607.9 gi|33151510|ref|NP_872863.1| - 0.018 14.9 0.3 0.13 12.1 0.3 2.1 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain HD_assoc PF13286.6 gi|33151510|ref|NP_872863.1| - 0.12 12.9 0.5 2.2 8.9 0.0 2.4 2 0 0 2 2 2 0 Phosphohydrolase-associated domain tRNA-synt_1 PF00133.22 gi|33151511|ref|NP_872864.1| - 9.8e-220 730.9 0.6 1.2e-219 730.6 0.6 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|33151511|ref|NP_872864.1| - 1.6e-29 102.8 0.4 3.6e-29 101.7 0.4 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|33151511|ref|NP_872864.1| - 2.6e-22 79.1 0.2 1.4e-11 43.8 0.0 3.7 2 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|33151511|ref|NP_872864.1| - 5.6e-08 32.5 0.0 8.7e-05 22.0 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain zf-FPG_IleRS PF06827.14 gi|33151511|ref|NP_872864.1| - 1.4e-07 31.2 3.0 1.4e-07 31.2 3.0 2.4 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS tRNA-synt_1f PF01921.18 gi|33151511|ref|NP_872864.1| - 3.4e-06 26.2 0.0 2.5e-05 23.4 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.6 gi|33151511|ref|NP_872864.1| - 6.7e-05 22.5 0.1 0.00018 21.1 0.0 1.7 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 FAD_syn PF06574.12 gi|33151512|ref|NP_872865.1| - 5.3e-51 172.6 0.0 9.7e-51 171.8 0.0 1.4 1 0 0 1 1 1 1 FAD synthetase Flavokinase PF01687.17 gi|33151512|ref|NP_872865.1| - 1.6e-36 125.0 0.1 3.1e-36 124.1 0.1 1.5 1 0 0 1 1 1 1 Riboflavin kinase CTP_transf_like PF01467.26 gi|33151512|ref|NP_872865.1| - 0.00068 19.8 0.1 0.0035 17.6 0.1 2.0 1 1 0 1 1 1 1 Cytidylyltransferase-like HEPN_Apea PF18739.1 gi|33151512|ref|NP_872865.1| - 0.18 12.2 1.1 0.38 11.2 0.2 2.1 2 1 0 2 2 2 0 Apea-like HEPN Metallophos PF00149.28 gi|33151513|ref|NP_872866.1| - 2.8e-07 31.2 0.0 3.6e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|33151513|ref|NP_872866.1| - 9e-06 26.0 0.0 9.5e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Response_reg PF00072.24 gi|33151515|ref|NP_872868.1| - 4.5e-28 97.7 0.4 1.7e-27 95.8 0.1 1.9 2 0 0 2 2 2 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|33151515|ref|NP_872868.1| - 4.1e-17 62.0 0.3 1.3e-16 60.5 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal OMP_b-brl PF13505.6 gi|33151516|ref|NP_872869.1| - 1.2e-20 74.4 9.7 1.4e-20 74.1 9.7 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Phenol_MetA_deg PF13557.6 gi|33151516|ref|NP_872869.1| - 0.001 19.1 2.5 0.0012 18.9 2.5 1.1 1 0 0 1 1 1 1 Putative MetA-pathway of phenol degradation Opacity PF02462.15 gi|33151516|ref|NP_872869.1| - 0.018 15.2 6.0 0.14 12.3 5.5 2.4 1 1 0 1 1 1 0 Opacity family porin protein DUF4145 PF13643.6 gi|33151517|ref|NP_872870.1| - 0.038 14.1 1.2 0.054 13.6 1.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4145) Fimbrial PF00419.20 gi|33151518|ref|NP_872871.1| - 7.8e-14 52.2 2.3 1.6e-13 51.2 0.9 1.8 2 0 0 2 2 2 1 Fimbrial protein FimA PF16970.5 gi|33151518|ref|NP_872871.1| - 0.0046 17.1 1.6 0.017 15.3 0.8 2.2 1 1 1 2 2 2 1 Type-1 fimbrial protein, A Usher PF00577.20 gi|33151520|ref|NP_872873.1| - 7.8e-163 543.2 23.2 9.8e-163 542.9 23.2 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_N PF13954.6 gi|33151520|ref|NP_872873.1| - 6.6e-40 136.5 0.0 1.5e-39 135.3 0.0 1.7 1 0 0 1 1 1 1 PapC N-terminal domain PapC_C PF13953.6 gi|33151520|ref|NP_872873.1| - 7.7e-15 54.5 0.3 3.7e-14 52.3 0.0 2.3 2 0 0 2 2 2 1 PapC C-terminal domain Big_6 PF17936.1 gi|33151520|ref|NP_872873.1| - 0.1 12.9 0.4 0.51 10.7 0.1 2.3 2 0 0 2 2 2 0 Bacterial Ig domain SBBP PF06739.11 gi|33151520|ref|NP_872873.1| - 0.15 12.1 2.7 0.55 10.3 2.7 2.0 1 0 0 1 1 1 0 Beta-propeller repeat PapD_N PF00345.20 gi|33151521|ref|NP_872874.1| - 7.3e-37 126.1 0.4 7.3e-37 126.1 0.4 1.4 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 gi|33151521|ref|NP_872874.1| - 1.2e-16 60.8 0.8 3e-16 59.5 0.5 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain DUF2020 PF09449.10 gi|33151521|ref|NP_872874.1| - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2020) Fimbrial PF00419.20 gi|33151522|ref|NP_872875.1| - 6.7e-07 29.7 0.1 8.8e-07 29.3 0.1 1.2 1 0 0 1 1 1 1 Fimbrial protein Alpha-mann_mid PF09261.11 gi|33151525|ref|NP_872878.1| - 0.0073 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Vault_4 PF17796.1 gi|33151525|ref|NP_872878.1| - 0.11 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Major Vault Protein repeat domain Forkhead PF00250.18 gi|33151526|ref|NP_872879.1| - 0.00067 19.9 1.1 0.0014 18.9 1.1 1.5 1 0 0 1 1 1 1 Forkhead domain FUR PF01475.19 gi|33151526|ref|NP_872879.1| - 0.044 13.9 1.1 0.1 12.7 0.4 1.8 2 0 0 2 2 2 0 Ferric uptake regulator family DDE_Tnp_IS1595 PF12762.7 gi|33151527|ref|NP_872880.1| - 1.6e-36 125.6 5.2 2.1e-36 125.3 5.2 1.1 1 0 0 1 1 1 1 ISXO2-like transposase domain PRY PF13765.6 gi|33151527|ref|NP_872880.1| - 0.013 15.1 0.7 0.066 12.9 0.1 2.2 2 0 0 2 2 2 0 SPRY-associated domain Zn_Tnp_IS1595 PF12760.7 gi|33151528|ref|NP_872881.1| - 1.3e-16 60.3 5.3 2.1e-16 59.6 5.3 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain CpXC PF14353.6 gi|33151528|ref|NP_872881.1| - 0.0019 18.2 2.1 0.65 10.1 0.1 2.2 1 1 1 2 2 2 2 CpXC protein Zn-ribbon_8 PF09723.10 gi|33151528|ref|NP_872881.1| - 0.0045 17.1 2.2 1.5 9.0 0.2 2.3 2 0 0 2 2 2 2 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|33151528|ref|NP_872881.1| - 0.0079 16.1 3.9 0.96 9.4 0.3 2.5 2 0 0 2 2 2 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|33151528|ref|NP_872881.1| - 0.017 15.0 3.3 0.032 14.1 3.3 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Rubredoxin PF00301.20 gi|33151528|ref|NP_872881.1| - 0.066 13.2 0.5 4.9 7.3 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin Post_transc_reg PF13797.6 gi|33151528|ref|NP_872881.1| - 0.14 12.0 0.0 0.81 9.6 0.0 2.0 2 0 0 2 2 2 0 Post-transcriptional regulator zf-BED PF02892.15 gi|33151528|ref|NP_872881.1| - 0.16 12.0 7.0 2.6 8.1 7.0 2.4 1 1 0 1 1 1 0 BED zinc finger Zn_ribbon_SprT PF17283.2 gi|33151528|ref|NP_872881.1| - 0.31 11.0 6.9 0.9 9.5 6.9 1.8 1 1 0 1 1 1 0 SprT-like zinc ribbon domain zf-Sec23_Sec24 PF04810.15 gi|33151528|ref|NP_872881.1| - 1.9 8.6 5.5 14 5.8 5.1 2.2 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger zinc_ribbon_2 PF13240.6 gi|33151528|ref|NP_872881.1| - 2.6 7.9 6.4 1.5 8.7 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|33151528|ref|NP_872881.1| - 5.6 6.8 9.2 51 3.7 9.2 2.2 1 1 0 1 1 1 0 Rubredoxin metal binding domain DUF4379 PF14311.6 gi|33151528|ref|NP_872881.1| - 8.4 6.8 10.4 1.5 9.3 2.6 2.5 1 1 1 2 2 2 0 Probable Zinc-ribbon domain HTH_3 PF01381.22 gi|33151529|ref|NP_872882.1| - 1.7e-09 37.6 0.0 2.4e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|33151529|ref|NP_872882.1| - 2.2e-08 34.0 0.1 3.7e-08 33.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|33151529|ref|NP_872882.1| - 0.00036 20.9 0.0 0.00054 20.3 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Phage_CI_repr PF07022.13 gi|33151529|ref|NP_872882.1| - 0.00072 19.6 0.0 0.00095 19.2 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_31 PF13560.6 gi|33151529|ref|NP_872882.1| - 0.069 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain LIP1 PF15904.5 gi|33151529|ref|NP_872882.1| - 0.12 12.7 0.6 0.24 11.8 0.6 1.5 1 1 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 N6_Mtase PF02384.16 gi|33151530|ref|NP_872883.1| - 1.4e-18 67.2 0.0 1.4e-18 67.2 0.0 1.7 2 0 0 2 2 2 1 N-6 DNA Methylase Methyltransf_23 PF13489.6 gi|33151530|ref|NP_872883.1| - 0.086 12.7 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33151530|ref|NP_872883.1| - 0.12 13.1 0.0 0.6 10.9 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain UPF0020 PF01170.18 gi|33151530|ref|NP_872883.1| - 0.14 11.8 0.0 0.35 10.5 0.0 1.7 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Nod1 PF17114.5 gi|33151530|ref|NP_872883.1| - 0.83 9.8 6.1 0.4 10.8 0.7 2.9 1 1 1 3 3 3 0 Gef2-related medial cortical node protein Nod1 Zn_Tnp_IS1595 PF12760.7 gi|33151532|ref|NP_872885.1| - 1.9e-16 59.8 3.4 3.2e-16 59.0 3.4 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain CpXC PF14353.6 gi|33151532|ref|NP_872885.1| - 0.47 10.5 4.1 6.2 6.9 0.5 2.2 1 1 2 3 3 3 0 CpXC protein zf-RanBP PF00641.18 gi|33151532|ref|NP_872885.1| - 1.3 8.4 9.1 0.37 10.2 3.6 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others LNS2 PF08235.13 gi|33151533|ref|NP_872886.1| - 0.00037 20.0 0.0 0.00071 19.1 0.0 1.3 1 1 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) Hydrolase_3 PF08282.12 gi|33151534|ref|NP_872887.1| - 2.2e-10 40.7 0.0 1.7e-09 37.8 0.0 2.2 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|33151534|ref|NP_872887.1| - 0.00047 20.5 0.9 0.3 11.3 0.0 2.8 3 1 0 3 3 3 2 haloacid dehalogenase-like hydrolase Ala_racemase_N PF01168.20 gi|33151535|ref|NP_872888.1| - 1.1e-30 107.0 0.2 1.3e-30 106.7 0.2 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain NPHI_C PF08469.10 gi|33151535|ref|NP_872888.1| - 0.011 15.7 0.5 0.086 12.8 0.2 2.1 2 0 0 2 2 2 0 Nucleoside triphosphatase I C-terminal CUT PF02376.15 gi|33151535|ref|NP_872888.1| - 0.073 13.3 0.1 0.24 11.6 0.0 1.9 2 0 0 2 2 2 0 CUT domain GTP_EFTU PF00009.27 gi|33151536|ref|NP_872889.1| - 2.6e-56 190.2 0.0 4.5e-56 189.5 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|33151536|ref|NP_872889.1| - 1e-22 80.0 0.0 2.6e-22 78.6 0.0 1.7 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|33151536|ref|NP_872889.1| - 1.5e-09 38.1 1.7 1.5e-09 38.1 1.7 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|33151536|ref|NP_872889.1| - 5.8e-07 29.6 0.2 1.7e-06 28.1 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase EFG_II PF14492.6 gi|33151536|ref|NP_872889.1| - 3.6e-05 23.8 0.0 7.4e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II Septin PF00735.18 gi|33151536|ref|NP_872889.1| - 0.0026 17.1 0.1 0.0046 16.3 0.1 1.3 1 0 0 1 1 1 1 Septin FeoB_N PF02421.18 gi|33151536|ref|NP_872889.1| - 0.0069 15.9 0.1 0.62 9.6 0.0 3.5 2 1 0 2 2 2 1 Ferrous iron transport protein B SRPRB PF09439.10 gi|33151536|ref|NP_872889.1| - 0.15 11.5 0.1 0.5 9.8 0.1 1.8 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Glutaredoxin PF00462.24 gi|33151537|ref|NP_872890.1| - 9.2e-09 35.4 0.1 1.3e-08 35.0 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 gi|33151537|ref|NP_872890.1| - 0.022 14.8 0.3 0.044 13.8 0.3 1.6 1 1 0 1 1 1 0 Thioredoxin domain RNase_PH PF01138.21 gi|33151538|ref|NP_872891.1| - 1.5e-24 87.0 0.1 2.6e-24 86.2 0.1 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|33151538|ref|NP_872891.1| - 7.3e-11 41.9 0.6 2.2e-10 40.4 0.7 1.7 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 YicC_N PF03755.13 gi|33151539|ref|NP_872892.1| - 3.1e-41 141.3 2.7 3.9e-41 141.0 0.0 2.2 1 1 1 2 2 2 1 YicC-like family, N-terminal region DUF1732 PF08340.11 gi|33151539|ref|NP_872892.1| - 8.9e-34 115.3 4.2 2.2e-33 114.1 4.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1732) PAS_7 PF12860.7 gi|33151539|ref|NP_872892.1| - 0.041 14.0 0.9 0.62 10.3 0.0 2.7 2 1 0 3 3 3 0 PAS fold Unstab_antitox PF09720.10 gi|33151539|ref|NP_872892.1| - 0.063 13.3 1.9 0.098 12.7 0.3 2.2 2 0 0 2 2 2 0 Putative addiction module component RasGAP PF00616.19 gi|33151539|ref|NP_872892.1| - 0.36 10.5 4.4 3.4 7.3 4.3 2.2 1 1 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase Baculo_PEP_C PF04513.12 gi|33151539|ref|NP_872892.1| - 0.42 10.6 11.5 1.4 8.9 0.3 2.9 2 1 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus GCV_T PF01571.21 gi|33151540|ref|NP_872893.1| - 1.6e-07 31.0 0.0 2.4e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain Fer4 PF00037.27 gi|33151541|ref|NP_872894.1| - 3.2e-05 23.6 1.2 3.2e-05 23.6 1.2 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|33151541|ref|NP_872894.1| - 6.2e-05 23.5 12.3 0.00019 21.9 12.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33151541|ref|NP_872894.1| - 0.00057 20.0 13.1 0.0026 17.9 13.7 1.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|33151541|ref|NP_872894.1| - 0.00099 19.1 12.7 0.11 12.7 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|33151541|ref|NP_872894.1| - 0.0041 17.2 17.8 0.014 15.5 17.8 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151541|ref|NP_872894.1| - 0.011 15.8 15.5 0.13 12.4 14.2 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151541|ref|NP_872894.1| - 0.015 15.8 1.5 0.015 15.8 1.5 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151541|ref|NP_872894.1| - 0.32 12.0 15.6 0.24 12.3 6.4 2.5 1 1 2 3 3 2 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|33151541|ref|NP_872894.1| - 1.6 8.9 18.4 0.15 12.2 3.7 2.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|33151541|ref|NP_872894.1| - 4.3 8.5 19.4 7.5 7.7 4.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|33151541|ref|NP_872894.1| - 7.6 7.1 16.7 3e+03 -1.2 16.7 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Response_reg PF00072.24 gi|33151542|ref|NP_872895.1| - 3e-29 101.4 0.4 4.9e-29 100.8 0.4 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 gi|33151542|ref|NP_872895.1| - 7.6e-27 92.6 0.2 1.4e-26 91.8 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 gi|33151542|ref|NP_872895.1| - 1.3e-06 27.8 0.0 3.9e-06 26.3 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|33151542|ref|NP_872895.1| - 1.4e-05 24.7 0.0 2.9e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|33151542|ref|NP_872895.1| - 0.00037 20.0 0.0 0.001 18.6 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|33151542|ref|NP_872895.1| - 0.017 15.2 0.0 0.057 13.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|33151542|ref|NP_872895.1| - 0.017 14.9 0.1 0.044 13.6 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.12 gi|33151542|ref|NP_872895.1| - 0.044 13.6 0.2 0.89 9.4 0.0 2.4 1 1 1 2 2 2 0 HTH DNA binding domain HTH_38 PF13936.6 gi|33151542|ref|NP_872895.1| - 0.045 13.5 0.2 0.16 11.8 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|33151542|ref|NP_872895.1| - 0.07 13.3 0.0 0.21 11.8 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain UPF0020 PF01170.18 gi|33151544|ref|NP_872897.1| - 3.8e-68 229.1 0.0 1.1e-65 221.0 0.0 2.4 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltrans_SAM PF10672.9 gi|33151544|ref|NP_872897.1| - 2.2e-20 73.0 0.3 3.6e-20 72.3 0.3 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase THUMP PF02926.17 gi|33151544|ref|NP_872897.1| - 2.6e-16 60.0 0.1 1.2e-15 57.9 0.0 2.0 2 0 0 2 2 2 1 THUMP domain Cons_hypoth95 PF03602.15 gi|33151544|ref|NP_872897.1| - 8.1e-13 48.4 0.0 6.1e-10 39.0 0.0 3.4 3 0 0 3 3 3 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|33151544|ref|NP_872897.1| - 8.5e-13 48.4 0.1 5e-05 23.1 0.0 3.7 4 0 0 4 4 4 2 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33151544|ref|NP_872897.1| - 2.6e-08 34.5 0.5 0.0062 17.2 0.0 4.0 4 1 0 4 4 4 2 Methyltransferase domain Methyltransf_15 PF09445.10 gi|33151544|ref|NP_872897.1| - 3.5e-07 29.9 0.0 0.00099 18.7 0.0 2.8 2 0 0 2 2 2 2 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|33151544|ref|NP_872897.1| - 1.4e-06 27.9 0.0 0.013 15.1 0.0 3.0 3 0 0 3 3 3 2 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|33151544|ref|NP_872897.1| - 2.8e-05 24.7 0.2 0.66 10.7 0.0 3.6 3 1 0 3 3 3 2 Methyltransferase domain PrmA PF06325.13 gi|33151544|ref|NP_872897.1| - 0.0067 15.9 0.1 0.58 9.5 0.0 3.1 3 0 0 3 3 3 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.16 gi|33151544|ref|NP_872897.1| - 0.011 15.5 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Met-10+ like-protein N6_Mtase PF02384.16 gi|33151544|ref|NP_872897.1| - 0.026 13.8 0.1 0.2 10.9 0.0 2.4 2 1 0 2 2 2 0 N-6 DNA Methylase LZ3wCH PF18517.1 gi|33151544|ref|NP_872897.1| - 0.045 13.8 0.3 0.13 12.4 0.3 1.8 1 0 0 1 1 1 0 Leucine zipper with capping helix domain SpoU_methylase PF00588.19 gi|33151545|ref|NP_872898.1| - 5.3e-32 110.9 0.0 6.1e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family TAL_FSA PF00923.19 gi|33151546|ref|NP_872899.1| - 6.4e-102 340.7 0.4 7.3e-102 340.6 0.4 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase BPD_transp_1 PF00528.22 gi|33151548|ref|NP_872901.1| - 7.9e-42 143.1 14.7 7.9e-42 143.1 14.7 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component CPBP PF02517.16 gi|33151548|ref|NP_872901.1| - 0.038 14.4 0.3 0.038 14.4 0.3 2.4 2 1 0 2 2 2 0 CPBP intramembrane metalloprotease BPD_transp_1 PF00528.22 gi|33151549|ref|NP_872902.1| - 4.8e-29 101.4 14.2 4.8e-29 101.4 14.2 2.4 2 1 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|33151549|ref|NP_872902.1| - 1.1e-16 60.5 1.6 1.1e-16 60.5 1.6 4.0 5 0 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|33151550|ref|NP_872903.1| - 1.1e-25 90.8 0.0 1.5e-25 90.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|33151550|ref|NP_872903.1| - 7.8e-17 61.6 0.2 1.3e-16 60.8 0.2 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|33151550|ref|NP_872903.1| - 4.3e-07 29.6 0.1 6.7e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|33151550|ref|NP_872903.1| - 5.6e-06 26.4 1.0 3e-05 24.0 0.1 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Herpes_ori_bp PF02399.15 gi|33151550|ref|NP_872903.1| - 0.08 11.0 0.1 0.11 10.5 0.1 1.1 1 0 0 1 1 1 0 Origin of replication binding protein AAA_15 PF13175.6 gi|33151550|ref|NP_872903.1| - 0.22 11.2 0.5 0.44 10.2 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 gi|33151551|ref|NP_872904.1| - 3.1e-30 105.5 0.0 4.6e-30 104.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|33151551|ref|NP_872904.1| - 7.7e-21 74.4 0.4 1.5e-20 73.4 0.4 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|33151551|ref|NP_872904.1| - 5.5e-05 22.7 0.0 8.8e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|33151551|ref|NP_872904.1| - 0.0028 17.6 0.0 0.0054 16.6 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|33151551|ref|NP_872904.1| - 0.003 17.8 0.6 0.0067 16.7 0.6 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33151551|ref|NP_872904.1| - 0.007 16.1 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|33151551|ref|NP_872904.1| - 0.025 15.0 0.0 0.046 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 gi|33151551|ref|NP_872904.1| - 0.026 14.2 0.0 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain IstB_IS21 PF01695.17 gi|33151551|ref|NP_872904.1| - 0.03 14.0 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 gi|33151551|ref|NP_872904.1| - 0.045 13.1 0.3 0.41 10.0 0.1 2.1 2 0 0 2 2 2 0 KaiC PRK PF00485.18 gi|33151551|ref|NP_872904.1| - 0.053 13.3 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_24 PF13479.6 gi|33151551|ref|NP_872904.1| - 0.064 13.0 0.0 0.13 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.6 gi|33151551|ref|NP_872904.1| - 0.11 12.2 0.1 22 4.7 0.0 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 gi|33151551|ref|NP_872904.1| - 0.16 12.1 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|33151551|ref|NP_872904.1| - 0.17 12.4 0.0 0.27 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|33151551|ref|NP_872904.1| - 0.24 10.0 1.1 1.7 7.2 0.4 2.0 2 0 0 2 2 2 0 AAA domain Tex_N PF09371.10 gi|33151552|ref|NP_872905.1| - 1.5e-67 226.8 1.7 3.3e-67 225.7 1.7 1.6 1 0 0 1 1 1 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 gi|33151552|ref|NP_872905.1| - 3.2e-49 166.6 0.1 9.4e-49 165.1 0.1 1.8 2 0 0 2 2 2 1 Tex protein YqgF-like domain HHH_3 PF12836.7 gi|33151552|ref|NP_872905.1| - 2.1e-28 98.4 0.0 5.3e-28 97.1 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_9 PF17674.1 gi|33151552|ref|NP_872905.1| - 3.7e-24 85.4 0.2 1.8e-23 83.2 0.0 2.4 2 0 0 2 2 2 1 HHH domain S1 PF00575.23 gi|33151552|ref|NP_872905.1| - 5.6e-22 77.9 1.9 1e-21 77.1 1.9 1.4 1 0 0 1 1 1 1 S1 RNA binding domain HHH_7 PF14635.6 gi|33151552|ref|NP_872905.1| - 2.6e-09 37.3 0.0 8.1e-09 35.8 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif YqgF PF14639.6 gi|33151552|ref|NP_872905.1| - 2.1e-08 34.1 0.0 6.2e-08 32.6 0.0 1.8 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 T2SSK PF03934.13 gi|33151552|ref|NP_872905.1| - 0.00047 19.6 0.1 0.0013 18.2 0.0 1.7 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein K HHH_6 PF14579.6 gi|33151552|ref|NP_872905.1| - 0.0036 17.5 0.0 0.017 15.4 0.0 2.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif RNase_II_C_S1 PF18614.1 gi|33151552|ref|NP_872905.1| - 0.11 12.4 0.1 0.43 10.6 0.1 1.9 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain TPR_2 PF07719.17 gi|33151553|ref|NP_872906.1| - 1.8e-12 46.4 10.9 0.00047 20.1 1.0 3.7 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33151553|ref|NP_872906.1| - 5.6e-11 41.8 10.0 0.00052 19.7 0.8 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33151553|ref|NP_872906.1| - 1.2e-08 35.1 14.4 0.00043 20.5 0.9 3.3 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|33151553|ref|NP_872906.1| - 1.7e-08 35.0 6.2 1.3e-06 28.9 0.2 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|33151553|ref|NP_872906.1| - 7.5e-08 32.2 8.2 0.019 15.3 0.2 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33151553|ref|NP_872906.1| - 1.1e-07 32.3 7.7 0.00027 21.4 0.7 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33151553|ref|NP_872906.1| - 2.3e-07 30.5 7.4 0.052 13.8 0.2 3.8 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|33151553|ref|NP_872906.1| - 3.4e-06 26.7 8.1 0.2 11.6 1.3 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|33151553|ref|NP_872906.1| - 0.00017 22.1 8.4 0.34 11.9 0.1 3.8 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|33151553|ref|NP_872906.1| - 0.00071 19.7 0.7 0.00071 19.7 0.7 2.5 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|33151553|ref|NP_872906.1| - 0.00081 19.0 0.8 0.00081 19.0 0.8 4.4 2 1 3 5 5 5 2 TPR repeat TPR_7 PF13176.6 gi|33151553|ref|NP_872906.1| - 0.011 15.7 13.1 0.1 12.7 0.8 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|33151553|ref|NP_872906.1| - 0.065 13.9 0.1 10 7.1 0.1 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33151553|ref|NP_872906.1| - 0.13 13.0 13.3 4 8.3 1.0 4.4 4 1 0 4 4 4 0 Tetratricopeptide repeat RPN7 PF10602.9 gi|33151553|ref|NP_872906.1| - 0.16 11.6 7.0 1.6 8.4 0.1 2.9 1 1 1 3 3 3 0 26S proteasome subunit RPN7 Peptidase_C50 PF03568.17 gi|33151553|ref|NP_872906.1| - 0.23 10.6 2.9 0.25 10.4 0.7 1.9 1 1 1 2 2 2 0 Peptidase family C50 ANAPC3 PF12895.7 gi|33151553|ref|NP_872906.1| - 0.25 11.6 12.7 0.38 11.0 1.1 2.8 1 1 2 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Radical_SAM PF04055.21 gi|33151554|ref|NP_872907.1| - 1.9e-15 57.6 0.1 8.2e-15 55.6 0.1 2.1 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|33151554|ref|NP_872907.1| - 0.003 17.7 0.1 0.012 15.7 0.0 2.1 2 1 0 2 2 2 1 4Fe-4S single cluster domain tRNA-synt_1c PF00749.21 gi|33151555|ref|NP_872908.1| - 2.5e-121 404.4 0.0 3.2e-121 404.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain Sod_Fe_C PF02777.18 gi|33151556|ref|NP_872909.1| - 5.8e-40 135.6 0.3 1.1e-39 134.7 0.1 1.5 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|33151556|ref|NP_872909.1| - 4.8e-30 103.9 1.4 4.8e-30 103.9 1.4 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Ribonuc_L-PSP PF01042.21 gi|33151557|ref|NP_872910.1| - 1.7e-28 99.1 0.3 1.8e-28 99.0 0.3 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Tudor-knot PF11717.8 gi|33151557|ref|NP_872910.1| - 0.05 13.5 0.2 0.11 12.4 0.2 1.5 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain DotU PF09850.9 gi|33151557|ref|NP_872910.1| - 0.13 11.9 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Type VI secretion system protein DotU Glutaredoxin PF00462.24 gi|33151559|ref|NP_872912.1| - 2.2e-16 59.8 0.0 3e-16 59.4 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Toprim_4 PF13662.6 gi|33151560|ref|NP_872913.1| - 2.8e-21 75.8 0.0 4.7e-21 75.1 0.0 1.4 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 gi|33151560|ref|NP_872913.1| - 1.3e-14 53.4 1.2 1.3e-14 53.4 1.2 1.8 2 0 0 2 2 2 1 RecR protein Toprim PF01751.22 gi|33151560|ref|NP_872913.1| - 2.6e-10 40.5 0.0 4.1e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Toprim domain HHH_5 PF14520.6 gi|33151560|ref|NP_872913.1| - 0.0024 18.5 0.0 0.017 15.7 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|33151560|ref|NP_872913.1| - 0.0025 17.6 1.0 0.0072 16.1 0.0 2.3 3 0 0 3 3 3 1 Helix-hairpin-helix motif zf-CXXC PF02008.20 gi|33151560|ref|NP_872913.1| - 0.086 12.9 2.9 0.14 12.2 2.9 1.3 1 0 0 1 1 1 0 CXXC zinc finger domain HHH_8 PF14716.6 gi|33151560|ref|NP_872913.1| - 0.16 12.4 0.0 1.6 9.2 0.0 2.5 3 0 0 3 3 3 0 Helix-hairpin-helix domain YbaB_DNA_bd PF02575.16 gi|33151561|ref|NP_872914.1| - 7.4e-34 115.9 11.1 8.4e-34 115.7 11.1 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family Phage_Mu_Gam PF07352.12 gi|33151561|ref|NP_872914.1| - 0.0035 17.3 0.8 0.0061 16.5 0.8 1.4 1 1 0 1 1 1 1 Bacteriophage Mu Gam like protein CARM1 PF11531.8 gi|33151561|ref|NP_872914.1| - 0.03 14.5 0.1 0.035 14.3 0.1 1.2 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal IIGP PF05049.13 gi|33151561|ref|NP_872914.1| - 0.049 12.7 0.2 0.07 12.2 0.2 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) DUF2164 PF09932.9 gi|33151561|ref|NP_872914.1| - 0.079 13.0 3.1 4 7.6 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2164) PspB PF06667.12 gi|33151561|ref|NP_872914.1| - 0.09 12.8 1.4 1.3 9.1 0.2 2.3 2 0 0 2 2 2 0 Phage shock protein B DUF2968 PF11180.8 gi|33151561|ref|NP_872914.1| - 0.18 11.4 3.7 0.6 9.7 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) DUF3947 PF13135.6 gi|33151561|ref|NP_872914.1| - 8.4 6.7 8.0 18 5.6 8.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3947) TonB_C PF03544.14 gi|33151562|ref|NP_872915.1| - 9.5e-19 67.6 0.0 1.9e-18 66.7 0.0 1.5 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal TonB_N PF16031.5 gi|33151562|ref|NP_872915.1| - 1.5e-08 35.2 22.8 1.5e-08 35.2 22.8 1.7 2 0 0 2 2 2 1 TonB polyproline region TonB_2 PF13103.6 gi|33151562|ref|NP_872915.1| - 3.8e-08 33.4 0.0 7.2e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 TonB C terminal TolA PF06519.11 gi|33151562|ref|NP_872915.1| - 0.00017 21.7 0.0 0.0006 20.0 0.0 1.8 2 0 0 2 2 2 1 TolA C-terminal GAGA_bind PF06217.12 gi|33151562|ref|NP_872915.1| - 1.1 9.5 5.0 1.9 8.7 5.0 1.4 1 0 0 1 1 1 0 GAGA binding protein-like family Pox_Ag35 PF03286.14 gi|33151562|ref|NP_872915.1| - 1.4 8.6 9.3 2.1 8.1 9.3 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Mitofilin PF09731.9 gi|33151562|ref|NP_872915.1| - 2.4 6.9 10.0 3.3 6.4 10.0 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ExbD PF02472.16 gi|33151563|ref|NP_872916.1| - 4e-20 72.3 5.7 4.9e-20 72.0 5.7 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR MotA_ExbB PF01618.16 gi|33151564|ref|NP_872917.1| - 3e-28 98.1 0.9 4.1e-28 97.7 0.9 1.2 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DctQ PF04290.12 gi|33151564|ref|NP_872917.1| - 0.042 13.8 1.6 1.4 8.9 0.3 2.2 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component Rhodanese PF00581.20 gi|33151565|ref|NP_872918.1| - 1.3e-11 44.9 0.0 1.7e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain TPR_20 PF14561.6 gi|33151566|ref|NP_872919.1| - 1.9e-23 82.6 10.7 7.9e-22 77.4 1.2 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33151566|ref|NP_872919.1| - 1.8e-17 63.6 9.0 2.9e-17 62.9 0.6 3.3 2 1 0 2 2 2 1 Tetratricopeptide repeat Thioredoxin PF00085.20 gi|33151566|ref|NP_872919.1| - 1.9e-12 47.0 0.1 2.1e-11 43.7 0.0 2.4 3 0 0 3 3 3 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|33151566|ref|NP_872919.1| - 0.00024 21.5 0.1 0.00073 20.0 0.0 1.9 2 1 0 2 2 2 1 Thioredoxin-like domain ANAPC3 PF12895.7 gi|33151566|ref|NP_872919.1| - 0.0017 18.5 5.6 0.0026 17.9 0.5 2.7 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 HyaE PF07449.11 gi|33151566|ref|NP_872919.1| - 0.0042 17.0 0.1 0.009 16.0 0.1 1.6 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 gi|33151566|ref|NP_872919.1| - 0.033 14.1 0.1 0.067 13.1 0.1 1.6 1 0 0 1 1 1 0 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|33151566|ref|NP_872919.1| - 0.036 13.4 0.1 0.058 12.7 0.1 1.4 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Bac_luciferase PF00296.20 gi|33151566|ref|NP_872919.1| - 0.074 12.5 0.5 0.11 11.9 0.5 1.2 1 0 0 1 1 1 0 Luciferase-like monooxygenase Clathrin PF00637.20 gi|33151566|ref|NP_872919.1| - 0.089 12.7 2.7 0.91 9.4 0.3 2.7 1 1 2 3 3 3 0 Region in Clathrin and VPS DIM1 PF02966.16 gi|33151566|ref|NP_872919.1| - 0.089 12.6 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Mitosis protein DIM1 TPR_16 PF13432.6 gi|33151566|ref|NP_872919.1| - 0.28 11.9 3.1 0.35 11.6 0.1 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat Pyr_redox_2 PF07992.14 gi|33151568|ref|NP_872921.1| - 5.7e-47 160.4 2.6 6.6e-47 160.1 2.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|33151568|ref|NP_872921.1| - 6.9e-17 61.6 0.1 1.1e-13 51.2 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|33151568|ref|NP_872921.1| - 9.3e-16 58.2 1.6 9.4e-15 54.9 0.3 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|33151568|ref|NP_872921.1| - 3.1e-07 29.9 7.4 0.0013 17.9 0.1 3.9 2 1 0 4 4 4 3 FAD binding domain GIDA PF01134.22 gi|33151568|ref|NP_872921.1| - 2.2e-05 23.7 4.7 0.085 11.9 0.0 4.0 4 0 0 4 4 4 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|33151568|ref|NP_872921.1| - 0.00014 21.4 0.1 0.00052 19.5 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|33151568|ref|NP_872921.1| - 0.0016 17.2 1.9 0.6 8.7 0.1 3.7 4 1 1 5 5 5 2 HI0933-like protein DAO PF01266.24 gi|33151568|ref|NP_872921.1| - 0.008 15.8 3.1 8.3 5.9 0.0 3.6 2 2 2 4 4 4 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|33151568|ref|NP_872921.1| - 0.017 15.5 0.1 0.23 11.9 0.1 2.4 3 0 0 3 3 3 0 Putative NAD(P)-binding K_oxygenase PF13434.6 gi|33151568|ref|NP_872921.1| - 0.036 13.2 0.0 0.069 12.3 0.0 1.4 1 1 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 gi|33151568|ref|NP_872921.1| - 0.064 13.5 0.2 0.31 11.3 0.0 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain CTP_transf_3 PF02348.19 gi|33151569|ref|NP_872922.1| - 2.7e-66 223.7 0.0 3.3e-66 223.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 gi|33151569|ref|NP_872922.1| - 5.6e-14 52.8 0.0 8.6e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|33151569|ref|NP_872922.1| - 0.0034 17.2 0.4 0.0082 16.0 0.4 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) NTP_transferase PF00483.23 gi|33151569|ref|NP_872922.1| - 0.03 13.9 0.2 0.057 13.0 0.1 1.6 2 0 0 2 2 2 0 Nucleotidyl transferase ADH_zinc_N PF00107.26 gi|33151569|ref|NP_872922.1| - 0.12 12.3 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase PseudoU_synth_2 PF00849.22 gi|33151571|ref|NP_872924.1| - 6.4e-17 62.1 0.0 1.9e-16 60.6 0.0 1.8 1 1 0 1 1 1 1 RNA pseudouridylate synthase FxsA PF04186.13 gi|33151572|ref|NP_872925.1| - 5.4e-23 81.2 1.9 7e-23 80.8 1.9 1.2 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein TusA PF01206.17 gi|33151573|ref|NP_872926.1| - 1.1e-23 82.8 0.0 1.3e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|33151573|ref|NP_872926.1| - 0.065 13.1 0.0 0.065 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) RraB PF06877.11 gi|33151574|ref|NP_872927.1| - 4e-27 94.9 1.0 6.4e-27 94.3 1.0 1.3 1 0 0 1 1 1 1 Regulator of ribonuclease activity B MMR_HSR1 PF01926.23 gi|33151575|ref|NP_872928.1| - 1.1e-21 77.0 0.0 1.6e-21 76.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|33151575|ref|NP_872928.1| - 3.3e-07 30.3 0.0 0.0041 17.0 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|33151575|ref|NP_872928.1| - 1.5e-06 28.4 0.0 0.046 13.8 0.0 2.3 1 1 1 2 2 2 2 Dynamin family FeoB_N PF02421.18 gi|33151575|ref|NP_872928.1| - 2.5e-06 27.1 0.0 3.5e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|33151575|ref|NP_872928.1| - 8.2e-05 22.2 0.1 0.02 14.4 0.0 2.3 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain AdenylateSensor PF16579.5 gi|33151575|ref|NP_872928.1| - 0.0041 17.6 0.0 0.42 11.1 0.0 2.3 2 0 0 2 2 2 1 Adenylate sensor of SNF1-like protein kinase Arf PF00025.21 gi|33151575|ref|NP_872928.1| - 0.005 16.3 0.4 0.055 12.9 0.4 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family AAA_22 PF13401.6 gi|33151575|ref|NP_872928.1| - 0.012 15.9 0.0 0.02 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|33151575|ref|NP_872928.1| - 0.044 13.2 0.0 0.072 12.5 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Septin PF00735.18 gi|33151575|ref|NP_872928.1| - 0.054 12.8 0.9 2.2 7.5 0.0 2.2 2 1 0 2 2 2 0 Septin AAA_29 PF13555.6 gi|33151575|ref|NP_872928.1| - 0.061 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|33151575|ref|NP_872928.1| - 0.062 13.8 0.1 0.14 12.7 0.1 1.8 1 1 0 1 1 1 0 ABC transporter DUF805 PF05656.14 gi|33151576|ref|NP_872929.1| - 1.3e-15 57.6 6.0 5.4e-15 55.7 6.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF805) DUF4401 PF14351.6 gi|33151576|ref|NP_872929.1| - 0.028 13.7 6.9 0.043 13.1 6.9 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4401) MFS_1 PF07690.16 gi|33151576|ref|NP_872929.1| - 0.041 12.8 10.9 0.049 12.6 10.9 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF2499 PF10693.9 gi|33151576|ref|NP_872929.1| - 0.14 12.5 1.7 0.25 11.6 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2499) COX2-transmemb PF09125.10 gi|33151576|ref|NP_872929.1| - 3.1 7.7 8.2 7.3 6.5 0.2 3.4 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane DUF2244 PF10003.9 gi|33151576|ref|NP_872929.1| - 6.6 6.4 8.9 0.45 10.2 1.3 2.0 1 1 1 2 2 2 0 Integral membrane protein (DUF2244) Cytochrom_C552 PF02335.15 gi|33151577|ref|NP_872930.1| - 8.2e-181 601.7 9.0 1e-180 601.4 9.0 1.0 1 0 0 1 1 1 1 Cytochrome c552 Cytochrom_c3_2 PF14537.6 gi|33151577|ref|NP_872930.1| - 3.5e-06 27.4 15.5 0.00022 21.6 4.7 3.3 2 1 0 2 2 2 2 Cytochrome c3 Cytochrome_C7 PF14522.6 gi|33151577|ref|NP_872930.1| - 0.00011 22.2 16.9 0.051 13.6 6.1 3.8 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Cytochrome_C554 PF13435.6 gi|33151577|ref|NP_872930.1| - 0.0003 21.6 14.0 0.042 14.8 0.1 3.9 3 1 1 4 4 4 2 Cytochrome c554 and c-prime Paired_CXXCH_1 PF09699.10 gi|33151577|ref|NP_872930.1| - 0.0003 20.5 10.5 0.048 13.4 1.0 3.5 2 2 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_NNT PF03264.14 gi|33151577|ref|NP_872930.1| - 0.00065 19.4 10.5 1.2 8.9 0.4 4.1 3 1 1 4 4 4 2 NapC/NirT cytochrome c family, N-terminal region CCP_MauG PF03150.14 gi|33151577|ref|NP_872930.1| - 0.0087 16.7 11.4 3.1 8.4 4.3 4.2 2 2 0 2 2 2 1 Di-haem cytochrome c peroxidase Cytochrome_CBB3 PF13442.6 gi|33151577|ref|NP_872930.1| - 0.049 13.9 11.7 8.4 6.8 0.1 4.6 2 2 1 3 3 3 0 Cytochrome C oxidase, cbb3-type, subunit III FAM92 PF06730.11 gi|33151577|ref|NP_872930.1| - 0.063 12.7 0.3 0.1 12.0 0.3 1.2 1 0 0 1 1 1 0 FAM92 protein Cytochrom_C550 PF14495.6 gi|33151577|ref|NP_872930.1| - 0.08 12.7 0.6 6.8 6.4 0.4 3.1 3 0 0 3 3 3 0 Cytochrome c-550 domain CytoC_RC PF02276.18 gi|33151577|ref|NP_872930.1| - 0.2 11.0 9.8 0.94 8.8 0.2 3.3 2 2 0 3 3 3 0 Photosynthetic reaction centre cytochrome C subunit Cytochrom_CIII PF02085.16 gi|33151577|ref|NP_872930.1| - 0.32 11.3 18.2 17 5.8 10.1 4.0 1 1 3 4 4 4 0 Class III cytochrome C family zf-C3HC PF07967.13 gi|33151577|ref|NP_872930.1| - 9.6 6.3 8.3 1.2 9.2 0.3 2.8 2 1 1 3 3 3 0 C3HC zinc finger-like Paired_CXXCH_1 PF09699.10 gi|33151578|ref|NP_872931.1| - 8.5e-10 38.2 22.2 0.00019 21.1 7.2 4.0 3 1 1 4 4 4 4 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C554 PF13435.6 gi|33151578|ref|NP_872931.1| - 9.6e-08 32.8 22.7 0.008 17.1 10.0 3.3 2 1 1 3 3 3 3 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.6 gi|33151578|ref|NP_872931.1| - 3.6e-06 26.9 29.6 0.12 12.4 8.1 3.1 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 gi|33151578|ref|NP_872931.1| - 1.8e-05 25.1 30.6 0.0076 16.7 13.4 3.4 1 1 2 3 3 3 3 Cytochrome c3 DZR PF12773.7 gi|33151578|ref|NP_872931.1| - 4.4e-05 23.4 14.9 0.0059 16.6 0.6 3.4 2 1 0 2 2 2 1 Double zinc ribbon Cytochrom_CIII PF02085.16 gi|33151578|ref|NP_872931.1| - 0.0016 18.8 30.4 0.076 13.4 8.6 3.5 1 1 3 4 4 4 3 Class III cytochrome C family DUF1924 PF09086.11 gi|33151578|ref|NP_872931.1| - 0.022 15.1 24.8 0.3 11.5 1.0 4.9 1 1 4 5 5 5 0 Domain of unknown function (DUF1924) DUF4515 PF14988.6 gi|33151578|ref|NP_872931.1| - 0.09 12.6 0.3 0.14 12.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) Cytochrome_CBB3 PF13442.6 gi|33151578|ref|NP_872931.1| - 0.23 11.8 27.9 3.1 8.2 1.5 5.4 2 1 4 6 6 5 0 Cytochrome C oxidase, cbb3-type, subunit III zinc_ribbon_9 PF14369.6 gi|33151578|ref|NP_872931.1| - 0.28 11.5 14.0 5.3 7.4 0.2 5.0 5 0 0 5 5 5 0 zinc-ribbon Cytochrome_P460 PF16694.5 gi|33151578|ref|NP_872931.1| - 1.3 9.4 28.0 1.6 9.1 0.2 5.0 1 1 4 5 5 5 0 Cytochrome P460 YhfH PF14149.6 gi|33151578|ref|NP_872931.1| - 1.4 8.9 5.3 8.6 6.4 0.1 3.3 3 0 0 3 3 3 0 YhfH-like protein DUF3365 PF11845.8 gi|33151578|ref|NP_872931.1| - 3.7 7.9 23.3 19 5.5 0.5 5.1 3 1 2 5 5 5 0 Protein of unknown function (DUF3365) PSCyt3 PF07627.11 gi|33151578|ref|NP_872931.1| - 9.9 6.5 26.2 1.1 9.5 0.6 5.0 1 1 3 5 5 5 0 Protein of unknown function (DUF1588) Fer4_11 PF13247.6 gi|33151579|ref|NP_872932.1| - 2.4e-24 85.3 11.5 2.4e-24 85.3 11.5 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|33151579|ref|NP_872932.1| - 9e-15 55.0 31.5 7.5e-07 29.6 12.0 4.1 2 2 2 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|33151579|ref|NP_872932.1| - 4.7e-13 48.6 36.8 0.00024 21.0 1.8 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|33151579|ref|NP_872932.1| - 2.9e-12 46.5 25.9 1.5e-06 28.2 8.0 2.8 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|33151579|ref|NP_872932.1| - 3.4e-12 45.7 39.9 7.6e-06 25.5 2.9 5.5 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|33151579|ref|NP_872932.1| - 1.8e-11 43.9 31.2 2.8e-06 27.4 9.5 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|33151579|ref|NP_872932.1| - 7.6e-09 35.9 43.2 0.019 15.9 2.4 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|33151579|ref|NP_872932.1| - 3.6e-08 33.0 35.1 0.00061 19.7 2.4 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|33151579|ref|NP_872932.1| - 4.2e-08 34.0 25.6 0.09 13.7 0.5 4.3 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|33151579|ref|NP_872932.1| - 4.9e-06 26.6 30.7 0.00049 20.2 12.1 3.8 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151579|ref|NP_872932.1| - 0.00042 20.8 25.5 0.033 14.7 7.6 3.8 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|33151579|ref|NP_872932.1| - 0.0019 18.6 38.5 0.023 15.2 3.0 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|33151579|ref|NP_872932.1| - 0.04 14.3 32.4 0.067 13.6 11.1 3.8 2 2 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|33151579|ref|NP_872932.1| - 0.057 13.6 25.0 0.46 10.7 0.3 4.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33151579|ref|NP_872932.1| - 0.11 13.4 1.2 0.11 13.4 1.2 3.9 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|33151579|ref|NP_872932.1| - 0.45 11.3 26.6 4.8 8.0 8.9 4.0 2 2 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|33151579|ref|NP_872932.1| - 4.1 8.0 31.3 0.15 12.6 1.1 4.4 3 1 1 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_20 PF14691.6 gi|33151579|ref|NP_872932.1| - 8.9 6.1 27.4 0.54 10.0 1.1 4.2 3 1 1 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NrfD PF03916.14 gi|33151580|ref|NP_872933.1| - 4e-91 305.9 34.9 4.7e-91 305.7 34.9 1.0 1 0 0 1 1 1 1 Polysulphide reductase, NrfD RF3_C PF16658.5 gi|33151581|ref|NP_872934.1| - 4.5e-46 155.9 0.0 8.5e-46 155.0 0.0 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain GTP_EFTU PF00009.27 gi|33151581|ref|NP_872934.1| - 7.1e-46 156.2 0.0 1.1e-45 155.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|33151581|ref|NP_872934.1| - 1.2e-09 38.4 0.1 4.1e-09 36.7 0.1 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|33151581|ref|NP_872934.1| - 0.00018 21.6 0.0 0.00042 20.4 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 gi|33151581|ref|NP_872934.1| - 0.00089 19.3 0.0 0.0018 18.3 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II SRPRB PF09439.10 gi|33151581|ref|NP_872934.1| - 0.029 13.8 0.1 1.1 8.6 0.1 2.8 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit Peptidase_M48 PF01435.18 gi|33151583|ref|NP_872936.1| - 1.9e-42 145.2 0.8 3.4e-42 144.5 0.8 1.4 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|33151583|ref|NP_872936.1| - 3.3e-07 29.8 0.1 3.6e-06 26.4 0.0 2.0 1 1 1 2 2 2 1 BlaR1 peptidase M56 Peptidase_M1 PF01433.20 gi|33151583|ref|NP_872936.1| - 9.4e-05 22.1 0.2 0.00014 21.5 0.2 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain SprT-like PF10263.9 gi|33151583|ref|NP_872936.1| - 0.0017 18.2 0.0 0.0028 17.5 0.0 1.3 1 0 0 1 1 1 1 SprT-like family Archease PF01951.16 gi|33151583|ref|NP_872936.1| - 0.056 13.7 0.1 0.39 11.0 0.1 2.0 2 0 0 2 2 2 0 Archease protein family (MTH1598/TM1083) DUF3681 PF12442.8 gi|33151583|ref|NP_872936.1| - 0.099 13.1 1.4 4 8.0 0.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3681) Cation_ATPase_C PF00689.21 gi|33151583|ref|NP_872936.1| - 1.4 8.6 10.6 0.56 9.9 1.8 2.7 2 1 0 2 2 2 0 Cation transporting ATPase, C-terminus YrvL PF14184.6 gi|33151583|ref|NP_872936.1| - 3.4 7.8 12.5 6.7 6.8 6.2 2.5 3 0 0 3 3 3 0 Regulatory protein YrvL Pyr_redox_2 PF07992.14 gi|33151584|ref|NP_872937.1| - 5.4e-65 219.5 2.5 8.7e-65 218.8 2.5 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|33151584|ref|NP_872937.1| - 1e-35 122.3 1.6 1.3e-34 118.8 0.9 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|33151584|ref|NP_872937.1| - 3.2e-16 59.6 1.8 1.3e-15 57.7 0.1 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|33151584|ref|NP_872937.1| - 6.6e-13 48.6 0.1 6.6e-13 48.6 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|33151584|ref|NP_872937.1| - 5.1e-05 22.6 0.0 0.00022 20.5 0.0 1.9 1 1 1 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|33151584|ref|NP_872937.1| - 0.00011 21.0 4.9 0.016 13.9 0.1 3.2 2 1 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|33151584|ref|NP_872937.1| - 0.019 14.0 5.1 1.1 8.2 1.8 2.9 3 0 0 3 3 3 0 FAD binding domain 3HCDH_N PF02737.18 gi|33151584|ref|NP_872937.1| - 0.032 14.1 0.1 0.078 12.8 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_oxidored PF12831.7 gi|33151584|ref|NP_872937.1| - 0.06 12.7 0.1 0.13 11.6 0.0 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 gi|33151584|ref|NP_872937.1| - 0.15 11.4 0.3 0.47 9.8 0.0 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIDA PF01134.22 gi|33151584|ref|NP_872937.1| - 1.2 8.1 7.5 0.19 10.8 1.2 2.5 2 2 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|33151584|ref|NP_872937.1| - 3.9 7.8 6.3 0.26 11.6 0.6 2.0 2 0 0 2 2 1 0 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|33151584|ref|NP_872937.1| - 9.7 6.2 9.3 2.3 8.2 0.2 2.8 4 0 0 4 4 3 0 FAD-NAD(P)-binding TatD_DNase PF01026.21 gi|33151585|ref|NP_872938.1| - 5.6e-60 202.9 0.2 6.7e-60 202.6 0.2 1.0 1 0 0 1 1 1 1 TatD related DNase FtsK_SpoIIIE PF01580.18 gi|33151585|ref|NP_872938.1| - 0.041 13.2 0.0 0.4 10.0 0.0 2.1 2 0 0 2 2 2 0 FtsK/SpoIIIE family CstA PF02554.14 gi|33151586|ref|NP_872939.1| - 1.2e-47 162.6 15.8 1.2e-47 162.6 15.8 2.7 2 1 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 gi|33151586|ref|NP_872939.1| - 2.3e-19 69.9 7.5 2.3e-19 69.9 7.5 3.1 3 0 0 3 3 3 1 5TM C-terminal transporter carbon starvation CstA DUF520 PF04461.13 gi|33151587|ref|NP_872940.1| - 2.8e-64 216.1 3.5 3.1e-64 216.0 3.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF520) ALS2CR8 PF15299.6 gi|33151587|ref|NP_872940.1| - 0.0092 15.9 1.1 0.0097 15.8 1.1 1.2 1 0 0 1 1 1 1 Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 DUF2850 PF11012.8 gi|33151587|ref|NP_872940.1| - 0.015 15.5 0.0 0.036 14.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2850) Bactofilin PF04519.13 gi|33151587|ref|NP_872940.1| - 0.016 15.5 0.7 0.22 11.8 0.5 2.1 1 1 1 2 2 2 0 Polymer-forming cytoskeletal DinI PF06183.13 gi|33151587|ref|NP_872940.1| - 0.095 13.0 0.2 0.19 12.1 0.2 1.4 1 0 0 1 1 1 0 DinI-like family SMP_2 PF10144.9 gi|33151589|ref|NP_872942.1| - 3.1e-59 199.2 7.9 4.2e-59 198.8 7.9 1.2 1 0 0 1 1 1 1 Bacterial virulence factor haemolysin CHASE8 PF17152.4 gi|33151589|ref|NP_872942.1| - 0.047 13.9 0.1 0.086 13.1 0.1 1.4 1 0 0 1 1 1 0 Periplasmic sensor domain eIF-1a PF01176.19 gi|33151590|ref|NP_872943.1| - 1.2e-26 92.3 0.0 1.3e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 gi|33151590|ref|NP_872943.1| - 3.4e-05 23.5 0.0 4.8e-05 23.0 0.0 1.3 1 1 0 1 1 1 1 RsgA N-terminal domain S1 PF00575.23 gi|33151590|ref|NP_872943.1| - 0.063 13.6 0.0 0.075 13.4 0.0 1.1 1 0 0 1 1 1 0 S1 RNA binding domain HI0933_like PF03486.14 gi|33151591|ref|NP_872944.1| - 1.8e-144 481.4 0.1 2e-144 481.3 0.1 1.0 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|33151591|ref|NP_872944.1| - 9.4e-13 48.1 2.5 6.5e-07 28.9 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|33151591|ref|NP_872944.1| - 8e-10 38.8 2.2 2.2e-07 30.8 0.8 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|33151591|ref|NP_872944.1| - 9.6e-10 38.1 7.9 3.9e-08 32.8 3.0 2.8 2 1 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 gi|33151591|ref|NP_872944.1| - 1.7e-08 34.5 0.2 3.4e-08 33.6 0.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|33151591|ref|NP_872944.1| - 4.8e-08 32.6 0.4 3.2e-07 29.9 0.2 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|33151591|ref|NP_872944.1| - 2.4e-05 23.8 0.1 0.047 13.0 0.1 2.4 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|33151591|ref|NP_872944.1| - 3.9e-05 23.2 0.1 5.5e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|33151591|ref|NP_872944.1| - 0.00019 20.6 0.5 0.00052 19.2 0.4 1.6 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|33151591|ref|NP_872944.1| - 0.00028 20.1 4.2 0.0055 15.8 0.4 2.6 3 0 0 3 3 3 2 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|33151591|ref|NP_872944.1| - 0.00038 21.0 1.1 0.0016 19.0 0.4 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|33151591|ref|NP_872944.1| - 0.00058 19.9 0.5 0.0046 16.9 0.5 2.2 1 1 0 1 1 1 1 FAD-NAD(P)-binding Thi4 PF01946.17 gi|33151591|ref|NP_872944.1| - 0.00069 18.9 3.1 0.0011 18.2 1.4 2.1 2 1 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 gi|33151591|ref|NP_872944.1| - 0.0008 18.8 0.6 0.0013 18.0 0.6 1.3 1 0 0 1 1 1 1 FAD binding domain ApbA PF02558.16 gi|33151591|ref|NP_872944.1| - 0.0034 17.0 1.3 0.0073 16.0 1.2 1.6 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 gi|33151591|ref|NP_872944.1| - 0.018 13.9 0.1 0.028 13.3 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|33151591|ref|NP_872944.1| - 0.027 13.8 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Citrate_bind PF16114.5 gi|33151591|ref|NP_872944.1| - 0.12 11.9 0.3 1.1 8.7 0.0 2.2 1 1 1 2 2 2 0 ATP citrate lyase citrate-binding UDPG_MGDP_dh_N PF03721.14 gi|33151591|ref|NP_872944.1| - 0.23 11.0 0.3 0.39 10.3 0.3 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Semialdhyde_dhC PF02774.18 gi|33151592|ref|NP_872945.1| - 4e-06 27.0 0.0 6.1e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|33151592|ref|NP_872945.1| - 0.0025 18.2 0.0 0.0063 17.0 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain tRNA_edit PF04073.15 gi|33151593|ref|NP_872946.1| - 1.4e-23 83.2 0.4 1.6e-23 83.1 0.4 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain RHH_1 PF01402.21 gi|33151594|ref|NP_872947.1| - 0.003 17.4 0.0 0.0059 16.5 0.0 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF4566 PF15130.6 gi|33151594|ref|NP_872947.1| - 0.052 13.0 0.0 0.068 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4566) CopG_antitoxin PF12441.8 gi|33151594|ref|NP_872947.1| - 0.059 13.9 0.2 0.078 13.5 0.2 1.3 1 0 0 1 1 1 0 CopG antitoxin of type II toxin-antitoxin system Flavodoxin_1 PF00258.25 gi|33151595|ref|NP_872948.1| - 8.6e-28 97.3 0.1 1e-27 97.1 0.1 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|33151595|ref|NP_872948.1| - 7.8e-10 38.7 0.0 9.4e-10 38.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 gi|33151595|ref|NP_872948.1| - 4e-05 23.9 0.0 5.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain FUR PF01475.19 gi|33151596|ref|NP_872949.1| - 2.9e-47 159.8 0.6 3.4e-47 159.5 0.6 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family TF_Zn_Ribbon PF08271.12 gi|33151596|ref|NP_872949.1| - 0.028 13.9 0.1 0.046 13.2 0.1 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding RXLR_WY PF18634.1 gi|33151596|ref|NP_872949.1| - 0.04 13.8 0.1 0.091 12.7 0.1 1.6 1 0 0 1 1 1 0 RXLR phytopathogen effector protein WY-domain DUF1296 PF06972.11 gi|33151596|ref|NP_872949.1| - 0.068 13.3 0.1 0.18 12.0 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1296) HTH_29 PF13551.6 gi|33151596|ref|NP_872949.1| - 0.15 12.1 0.0 0.36 10.9 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn helix MlaD PF02470.20 gi|33151597|ref|NP_872950.1| - 4.6e-57 190.3 8.0 1.9e-13 50.5 0.3 7.4 7 0 0 7 7 7 6 MlaD protein MreC PF04085.14 gi|33151597|ref|NP_872950.1| - 0.0081 16.1 7.7 13 5.7 0.1 4.6 3 2 1 4 4 4 3 rod shape-determining protein MreC Herpes_HEPA PF03324.14 gi|33151597|ref|NP_872950.1| - 0.061 13.8 0.0 2.7 8.5 0.0 3.2 4 0 0 4 4 4 0 Herpesvirus DNA helicase/primase complex associated protein PilZ PF07238.14 gi|33151597|ref|NP_872950.1| - 0.099 13.0 0.2 16 5.9 0.0 3.8 4 0 0 4 4 4 0 PilZ domain LuxS PF02664.15 gi|33151598|ref|NP_872951.1| - 3.6e-58 195.6 0.0 4.1e-58 195.4 0.0 1.0 1 0 0 1 1 1 1 S-Ribosylhomocysteinase (LuxS) Sulfatase PF00884.23 gi|33151599|ref|NP_872952.1| - 1.8e-28 99.9 0.9 2.3e-28 99.5 0.9 1.2 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 gi|33151599|ref|NP_872952.1| - 0.00035 20.5 5.4 0.00074 19.4 5.4 1.5 1 0 0 1 1 1 1 Phosphoethanolamine transferase EptA/EptB Phosphodiest PF01663.22 gi|33151599|ref|NP_872952.1| - 0.0093 15.6 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Asparaginase PF00710.20 gi|33151600|ref|NP_872953.1| - 9.1e-62 208.0 2.3 1e-61 207.8 1.4 1.5 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|33151600|ref|NP_872953.1| - 1.1e-27 96.5 0.4 3.6e-27 94.8 0.0 2.0 2 1 1 3 3 3 1 Glutaminase/Asparaginase C-terminal domain CTP_synth_N PF06418.14 gi|33151601|ref|NP_872954.1| - 2.2e-124 414.0 0.0 3e-124 413.6 0.0 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|33151601|ref|NP_872954.1| - 3.1e-61 206.5 0.0 4.9e-61 205.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|33151601|ref|NP_872954.1| - 1.3e-08 34.8 1.3 2.5e-07 30.7 0.4 2.6 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|33151601|ref|NP_872954.1| - 0.017 15.1 0.0 0.021 14.9 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2301 PF10063.9 gi|33151602|ref|NP_872955.1| - 2.9e-08 34.2 3.2 6.9e-07 29.8 0.3 2.3 1 1 1 2 2 2 2 Uncharacterized integral membrane protein (DUF2301) Glycos_transf_2 PF00535.26 gi|33151603|ref|NP_872956.1| - 4.4e-09 36.4 0.0 6.3e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|33151603|ref|NP_872956.1| - 0.00075 19.4 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Dus PF01207.17 gi|33151604|ref|NP_872957.1| - 1.6e-91 306.7 0.0 1.8e-91 306.5 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|33151604|ref|NP_872957.1| - 0.0016 18.0 0.0 0.0046 16.5 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.17 gi|33151604|ref|NP_872957.1| - 0.17 11.3 0.0 0.9 8.9 0.0 2.1 1 1 1 2 2 2 0 PcrB family A_deaminase PF00962.22 gi|33151605|ref|NP_872958.1| - 1.5e-70 238.1 0.1 1.9e-70 237.8 0.1 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase His_biosynth PF00977.21 gi|33151605|ref|NP_872958.1| - 0.12 11.8 0.1 0.74 9.2 0.0 2.0 2 0 0 2 2 2 0 Histidine biosynthesis protein NifU PF01106.17 gi|33151606|ref|NP_872959.1| - 2.4e-19 69.3 0.1 4e-19 68.5 0.1 1.4 1 0 0 1 1 1 1 NifU-like domain Fe-S_biosyn PF01521.20 gi|33151606|ref|NP_872959.1| - 3.4e-10 40.1 0.0 7.3e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis NQRA PF05896.11 gi|33151607|ref|NP_872960.1| - 4.6e-111 370.3 0.5 5.7e-111 370.1 0.5 1.1 1 0 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NQRA_SLBB PF11973.8 gi|33151607|ref|NP_872960.1| - 5e-23 81.5 1.5 1e-22 80.5 1.5 1.6 1 0 0 1 1 1 1 NQRA C-terminal domain RnfC_N PF13375.6 gi|33151607|ref|NP_872960.1| - 2e-06 27.7 0.3 3.5e-06 26.9 0.3 1.4 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 gi|33151607|ref|NP_872960.1| - 0.0011 18.7 0.3 0.012 15.4 0.0 2.5 2 0 0 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 gi|33151607|ref|NP_872960.1| - 0.0019 18.0 0.7 0.0038 17.0 0.7 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Peptidase_M23 PF01551.22 gi|33151607|ref|NP_872960.1| - 0.071 13.3 0.6 15 5.9 0.1 2.8 2 1 1 3 3 3 0 Peptidase family M23 NQR2_RnfD_RnfE PF03116.15 gi|33151608|ref|NP_872961.1| - 2.5e-107 358.6 25.8 3e-107 358.4 25.8 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family FMN_bind PF04205.14 gi|33151609|ref|NP_872962.1| - 5e-14 52.6 0.1 1e-13 51.6 0.1 1.5 1 0 0 1 1 1 1 FMN-binding domain DUF267 PF03268.14 gi|33151609|ref|NP_872962.1| - 0.067 12.1 0.1 0.11 11.4 0.1 1.2 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 Rnf-Nqr PF02508.14 gi|33151610|ref|NP_872963.1| - 1.8e-61 207.1 16.6 2.1e-61 206.9 16.6 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein DUF1138 PF06592.13 gi|33151610|ref|NP_872963.1| - 0.019 15.0 0.2 0.083 13.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1138) YrhC PF14143.6 gi|33151610|ref|NP_872963.1| - 0.16 12.1 4.2 1.4 9.1 0.0 3.0 3 0 0 3 3 3 0 YrhC-like protein DUF1435 PF07256.12 gi|33151610|ref|NP_872963.1| - 1.6 8.9 7.2 2.4 8.3 3.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1435) Rnf-Nqr PF02508.14 gi|33151611|ref|NP_872964.1| - 9e-57 191.8 19.2 1e-56 191.7 19.2 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein Gemini_mov PF01708.16 gi|33151611|ref|NP_872964.1| - 0.21 11.4 0.5 0.62 9.9 0.4 1.8 1 1 0 1 1 1 0 Geminivirus putative movement protein NAD_binding_1 PF00175.21 gi|33151612|ref|NP_872965.1| - 1.4e-17 64.3 0.0 2.5e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|33151612|ref|NP_872965.1| - 1.8e-11 44.3 0.0 1.6e-10 41.2 0.0 2.1 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain Fer2 PF00111.27 gi|33151612|ref|NP_872965.1| - 3e-11 43.1 0.1 5.3e-11 42.3 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NAD_binding_6 PF08030.12 gi|33151612|ref|NP_872965.1| - 0.0092 16.1 0.0 0.045 13.9 0.0 1.9 2 0 0 2 2 2 1 Ferric reductase NAD binding domain DOCK-C2 PF14429.6 gi|33151612|ref|NP_872965.1| - 0.13 12.1 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 C2 domain in Dock180 and Zizimin proteins ApbE PF02424.15 gi|33151613|ref|NP_872966.1| - 2.7e-79 266.3 0.0 3.2e-79 266.1 0.0 1.0 1 0 0 1 1 1 1 ApbE family NqrM PF04400.13 gi|33151614|ref|NP_872967.1| - 1e-16 60.4 5.9 1.4e-16 59.9 5.9 1.2 1 0 0 1 1 1 1 (Na+)-NQR maturation NqrM TonB_dep_Rec PF00593.24 gi|33151615|ref|NP_872968.1| - 3.4e-44 152.5 18.4 3.4e-44 152.5 18.4 1.9 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 gi|33151615|ref|NP_872968.1| - 1.2e-16 61.2 0.9 2.4e-16 60.2 0.9 1.5 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain tRNA_Me_trans PF03054.16 gi|33151616|ref|NP_872969.1| - 2.2e-142 474.1 0.0 2.5e-142 473.9 0.0 1.0 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|33151616|ref|NP_872969.1| - 1.3e-07 31.0 0.0 3.7e-07 29.5 0.0 1.7 2 0 0 2 2 2 1 NAD synthase Asn_synthase PF00733.21 gi|33151616|ref|NP_872969.1| - 7.2e-06 25.9 0.0 9.7e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|33151616|ref|NP_872969.1| - 5e-05 23.0 0.0 7.4e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|33151616|ref|NP_872969.1| - 0.00074 19.1 0.0 0.0013 18.3 0.0 1.6 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC MFS_1_like PF12832.7 gi|33151617|ref|NP_872970.1| - 6.7e-36 124.0 36.1 1.9e-35 122.4 36.1 1.6 1 1 0 1 1 1 1 MFS_1 like family Nuc_H_symport PF03825.16 gi|33151617|ref|NP_872970.1| - 3e-08 33.1 26.8 3.9e-08 32.7 26.8 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter RdgC PF04381.12 gi|33151618|ref|NP_872971.1| - 6.7e-110 367.0 9.3 7.9e-110 366.8 9.3 1.0 1 0 0 1 1 1 1 Putative exonuclease, RdgC NRDD PF13597.6 gi|33151619|ref|NP_872972.1| - 1.6e-112 377.2 9.3 1.9e-112 376.9 9.3 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase DUF4240 PF14024.6 gi|33151619|ref|NP_872972.1| - 0.005 17.0 0.4 0.039 14.1 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF4240) Fer4_12 PF13353.6 gi|33151620|ref|NP_872973.1| - 7.7e-11 42.4 0.1 9.7e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|33151620|ref|NP_872973.1| - 4.8e-08 33.1 0.1 7.6e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|33151620|ref|NP_872973.1| - 0.00011 22.7 0.0 0.00014 22.3 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Rnf-Nqr PF02508.14 gi|33151621|ref|NP_872974.1| - 7e-60 202.0 21.2 7.8e-60 201.8 21.2 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein Fer4_21 PF14697.6 gi|33151622|ref|NP_872975.1| - 6e-17 61.5 17.2 6e-17 61.5 17.2 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain FeS PF04060.13 gi|33151622|ref|NP_872975.1| - 5.4e-13 48.3 4.2 5.4e-13 48.3 4.2 2.2 2 0 0 2 2 2 1 Putative Fe-S cluster Fer4 PF00037.27 gi|33151622|ref|NP_872975.1| - 7.8e-12 44.5 25.8 2e-07 30.6 4.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|33151622|ref|NP_872975.1| - 2.5e-10 40.8 14.5 8.3e-05 23.1 1.0 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33151622|ref|NP_872975.1| - 2.6e-07 30.7 34.6 1.1e-06 28.7 15.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151622|ref|NP_872975.1| - 9.6e-07 28.8 13.7 9.6e-07 28.8 13.7 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33151622|ref|NP_872975.1| - 1.4e-06 29.1 18.2 0.00034 21.5 2.5 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|33151622|ref|NP_872975.1| - 2.6e-06 27.2 20.3 9.6e-05 22.3 1.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33151622|ref|NP_872975.1| - 4.4e-06 26.5 26.0 5.8e-05 23.0 4.4 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|33151622|ref|NP_872975.1| - 0.0074 17.2 4.7 0.0074 17.2 4.7 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_22 PF17179.4 gi|33151622|ref|NP_872975.1| - 0.02 15.7 0.5 0.02 15.7 0.5 2.6 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33151622|ref|NP_872975.1| - 0.025 15.1 21.3 0.046 14.3 2.5 3.3 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|33151622|ref|NP_872975.1| - 0.071 13.7 24.5 0.1 13.2 3.6 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|33151622|ref|NP_872975.1| - 1.3 9.3 15.2 5.2 7.3 4.1 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|33151622|ref|NP_872975.1| - 1.9 9.3 17.0 2.3 9.0 3.0 3.1 2 1 0 2 2 2 0 4Fe-4S single cluster domain Complex1_51K PF01512.17 gi|33151623|ref|NP_872976.1| - 1.9e-46 157.7 0.0 5.2e-46 156.3 0.0 1.8 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit RnfC_N PF13375.6 gi|33151623|ref|NP_872976.1| - 1.4e-32 111.7 0.0 4.1e-32 110.1 0.0 1.9 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Fer4_7 PF12838.7 gi|33151623|ref|NP_872976.1| - 8.1e-10 39.1 7.3 1.9e-09 38.0 7.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33151623|ref|NP_872976.1| - 8.6e-09 35.4 17.9 1e-06 28.7 10.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain SLBB PF10531.9 gi|33151623|ref|NP_872976.1| - 3.3e-08 33.3 0.0 7e-08 32.2 0.0 1.6 1 0 0 1 1 1 1 SLBB domain Fer4_8 PF13183.6 gi|33151623|ref|NP_872976.1| - 2.4e-07 31.1 19.1 7.1e-06 26.4 9.6 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|33151623|ref|NP_872976.1| - 3.6e-07 29.7 12.8 0.00056 19.6 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain NQRA PF05896.11 gi|33151623|ref|NP_872976.1| - 9.9e-07 28.4 0.0 2e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Fer4_9 PF13187.6 gi|33151623|ref|NP_872976.1| - 1.1e-06 28.7 6.7 3.2e-06 27.2 6.7 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|33151623|ref|NP_872976.1| - 2e-06 27.6 14.3 0.00071 19.5 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|33151623|ref|NP_872976.1| - 4.6e-05 24.3 12.6 0.031 15.2 2.2 3.6 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|33151623|ref|NP_872976.1| - 0.00012 22.3 10.3 0.0024 18.2 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33151623|ref|NP_872976.1| - 0.00013 21.9 12.4 0.016 15.3 2.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|33151623|ref|NP_872976.1| - 0.00014 22.4 10.6 0.0016 19.0 10.6 2.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|33151623|ref|NP_872976.1| - 0.00016 21.7 10.3 0.00052 20.1 9.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33151623|ref|NP_872976.1| - 0.0017 19.1 5.7 0.048 14.5 0.6 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|33151623|ref|NP_872976.1| - 0.049 13.4 3.3 0.12 12.2 3.3 1.6 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|33151623|ref|NP_872976.1| - 0.083 13.1 9.8 0.35 11.1 0.6 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|33151623|ref|NP_872976.1| - 0.12 13.3 15.5 1.7 9.8 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|33151623|ref|NP_872976.1| - 4.2 8.0 20.9 11 6.6 6.2 4.5 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I NQR2_RnfD_RnfE PF03116.15 gi|33151624|ref|NP_872977.1| - 4e-97 325.2 24.0 4.5e-97 325.0 24.0 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family FMN_bind PF04205.14 gi|33151625|ref|NP_872978.1| - 5.4e-18 65.3 0.0 8.3e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 FMN-binding domain Rnf-Nqr PF02508.14 gi|33151626|ref|NP_872979.1| - 7.5e-66 221.4 8.5 8.6e-66 221.2 8.5 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein Lip_A_acyltrans PF03279.13 gi|33151627|ref|NP_872980.1| - 2.9e-93 312.3 0.3 3.3e-93 312.1 0.3 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Wzy_C PF04932.15 gi|33151627|ref|NP_872980.1| - 0.0027 17.4 0.3 0.0043 16.7 0.3 1.2 1 0 0 1 1 1 1 O-Antigen ligase DUF302 PF03625.14 gi|33151628|ref|NP_872981.1| - 3.3e-15 55.7 0.3 7e-15 54.7 0.2 1.6 2 0 0 2 2 2 1 Domain of unknown function DUF302 GATase PF00117.28 gi|33151629|ref|NP_872982.1| - 3.2e-39 134.7 0.0 3.8e-39 134.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|33151629|ref|NP_872982.1| - 1e-10 41.8 0.0 1.5e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 RmuC PF02646.16 gi|33151630|ref|NP_872983.1| - 2.9e-96 322.0 1.7 2.9e-96 322.0 1.7 3.6 2 1 3 5 5 5 1 RmuC family FUSC PF04632.12 gi|33151630|ref|NP_872983.1| - 2.7 6.4 8.2 1.6 7.2 6.5 1.4 2 0 0 2 2 2 0 Fusaric acid resistance protein family Tropomyosin_1 PF12718.7 gi|33151630|ref|NP_872983.1| - 6.1 7.0 49.4 0.048 13.8 17.4 5.1 3 2 2 5 5 5 0 Tropomyosin like Mod_r PF07200.13 gi|33151630|ref|NP_872983.1| - 8.3 6.5 54.9 12 5.9 22.1 4.5 3 1 1 4 4 4 0 Modifier of rudimentary (Mod(r)) protein Chorismate_bind PF00425.18 gi|33151631|ref|NP_872984.1| - 3.4e-59 200.5 0.0 4.5e-59 200.1 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme DLP_helical PF18709.1 gi|33151631|ref|NP_872984.1| - 0.056 12.6 0.2 0.089 12.0 0.2 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain Aminotran_4 PF01063.19 gi|33151632|ref|NP_872985.1| - 3.8e-14 53.1 0.1 1.7e-11 44.5 0.1 2.1 1 1 0 1 1 1 1 Amino-transferase class IV Mis12 PF05859.12 gi|33151632|ref|NP_872985.1| - 0.019 15.0 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 Mis12 protein RecA PF00154.21 gi|33151633|ref|NP_872986.1| - 9e-144 477.7 3.1 9e-144 477.7 3.1 1.6 2 0 0 2 2 2 1 recA bacterial DNA recombination protein Rad51 PF08423.11 gi|33151633|ref|NP_872986.1| - 1.6e-12 47.2 0.4 4.3e-12 45.8 0.4 1.6 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|33151633|ref|NP_872986.1| - 2.6e-10 40.1 0.7 2.3e-08 33.7 0.7 2.8 1 1 0 1 1 1 1 KaiC ATPase_2 PF01637.18 gi|33151633|ref|NP_872986.1| - 9e-05 22.5 0.0 0.00022 21.2 0.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|33151633|ref|NP_872986.1| - 0.00029 20.6 0.0 0.00055 19.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|33151633|ref|NP_872986.1| - 0.00079 19.1 0.5 0.14 11.7 0.5 2.5 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|33151633|ref|NP_872986.1| - 0.031 14.7 0.0 0.1 13.0 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_35 PF14516.6 gi|33151633|ref|NP_872986.1| - 0.038 12.8 0.0 0.067 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_22 PF13401.6 gi|33151633|ref|NP_872986.1| - 0.053 13.8 0.0 0.2 12.0 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|33151633|ref|NP_872986.1| - 0.067 13.6 0.4 0.16 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain CLP1_P PF16575.5 gi|33151633|ref|NP_872986.1| - 0.18 11.6 0.0 0.37 10.6 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop PAXNEB PF05625.11 gi|33151633|ref|NP_872986.1| - 0.21 10.7 0.5 0.36 9.9 0.5 1.3 1 0 0 1 1 1 0 PAXNEB protein RecX PF02631.16 gi|33151634|ref|NP_872987.1| - 3.6e-28 98.5 1.9 5e-28 98.0 1.9 1.2 1 0 0 1 1 1 1 RecX family NP1-WLL PF11733.8 gi|33151634|ref|NP_872987.1| - 0.068 12.9 0.2 0.071 12.9 0.2 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 Lip_prot_lig_C PF10437.9 gi|33151634|ref|NP_872987.1| - 0.069 13.1 0.4 0.16 12.0 0.1 1.7 2 0 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Atg29_N PF18388.1 gi|33151634|ref|NP_872987.1| - 0.17 11.8 1.9 3.6 7.5 0.1 2.4 1 1 1 2 2 2 0 Atg29 N-terminal domain ASCH PF04266.14 gi|33151635|ref|NP_872988.1| - 1.6e-19 70.4 0.0 1.7e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 ASCH domain DUF4272 PF14094.6 gi|33151635|ref|NP_872988.1| - 0.094 11.9 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4272) zf-C4_Topoisom PF01396.19 gi|33151636|ref|NP_872989.1| - 2.4e-43 145.6 28.4 1.2e-13 50.6 0.4 4.1 4 0 0 4 4 4 4 Topoisomerase DNA binding C4 zinc finger zf_Rg PF17915.1 gi|33151636|ref|NP_872989.1| - 4.9e-06 25.9 12.0 0.0084 15.5 2.1 3.9 4 0 0 4 4 4 2 Reverse gyrase zinc finger DZR PF12773.7 gi|33151636|ref|NP_872989.1| - 0.00011 22.2 16.1 0.017 15.1 4.9 3.5 2 1 0 2 2 2 2 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|33151636|ref|NP_872989.1| - 0.00012 22.1 15.3 1.3 9.2 0.3 4.7 5 0 0 5 5 4 3 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|33151636|ref|NP_872989.1| - 0.00015 21.0 9.5 0.93 9.0 0.1 4.6 4 0 0 4 4 4 1 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|33151636|ref|NP_872989.1| - 0.00029 20.8 19.6 0.8 9.8 0.4 5.1 4 2 0 4 4 4 3 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_2 PF13240.6 gi|33151636|ref|NP_872989.1| - 0.0004 20.0 11.5 0.46 10.3 0.1 4.6 4 0 0 4 4 4 1 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|33151636|ref|NP_872989.1| - 0.00075 19.6 9.4 1.8 8.8 0.0 4.1 4 0 0 4 4 4 2 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) A2L_zn_ribbon PF08792.10 gi|33151636|ref|NP_872989.1| - 0.01 15.6 10.0 0.3 10.9 0.0 4.6 4 0 0 4 4 4 0 A2L zinc ribbon domain zf-IS66 PF13005.7 gi|33151636|ref|NP_872989.1| - 0.018 15.5 9.5 3.1 8.3 0.1 4.6 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_5 PF13719.6 gi|33151636|ref|NP_872989.1| - 0.018 14.8 5.9 1.8 8.4 0.1 4.4 4 0 0 4 4 4 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|33151636|ref|NP_872989.1| - 0.019 14.3 13.4 5.3 6.5 1.1 4.4 3 1 1 4 4 4 0 Transcription factor zinc-finger zf-NADH-PPase PF09297.11 gi|33151636|ref|NP_872989.1| - 0.047 13.4 14.5 4.9 6.9 0.1 4.4 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain DUF1272 PF06906.11 gi|33151636|ref|NP_872989.1| - 0.051 13.7 12.9 2.8 8.1 0.0 4.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.12 gi|33151636|ref|NP_872989.1| - 0.12 12.4 20.9 8.3 6.5 0.2 3.7 1 1 2 3 3 3 0 zinc-ribbons DUF983 PF06170.12 gi|33151636|ref|NP_872989.1| - 0.28 11.6 4.5 14 6.2 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF983) TF_Zn_Ribbon PF08271.12 gi|33151636|ref|NP_872989.1| - 0.29 10.7 10.1 9 5.9 0.0 4.3 4 0 0 4 4 4 0 TFIIB zinc-binding PADR1 PF08063.12 gi|33151636|ref|NP_872989.1| - 0.3 10.9 23.0 1 9.2 0.6 4.4 4 0 0 4 4 4 0 PADR1 (NUC008) domain zinc_ribbon_9 PF14369.6 gi|33151636|ref|NP_872989.1| - 0.54 10.6 18.6 2.6 8.4 0.8 4.7 5 0 0 5 5 4 0 zinc-ribbon UPF0547 PF10571.9 gi|33151636|ref|NP_872989.1| - 0.84 9.8 0.1 0.84 9.8 0.1 5.6 6 1 1 7 7 6 0 Uncharacterised protein family UPF0547 Rubredoxin PF00301.20 gi|33151636|ref|NP_872989.1| - 0.87 9.7 11.8 27 4.9 0.1 4.7 4 0 0 4 4 4 0 Rubredoxin Zn_ribbon_recom PF13408.6 gi|33151636|ref|NP_872989.1| - 1 9.9 21.5 1.2 9.7 0.8 4.0 3 1 1 4 4 4 0 Recombinase zinc beta ribbon domain Nop10p PF04135.12 gi|33151636|ref|NP_872989.1| - 1.2 9.2 4.8 46 4.1 0.1 3.7 4 0 0 4 4 4 0 Nucleolar RNA-binding protein, Nop10p family HypA PF01155.19 gi|33151636|ref|NP_872989.1| - 1.7 8.7 16.1 2.9 8.0 1.5 3.2 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_SprT PF17283.2 gi|33151636|ref|NP_872989.1| - 2.2 8.3 18.3 6 6.9 0.7 4.5 3 1 0 3 3 3 0 SprT-like zinc ribbon domain ADK_lid PF05191.14 gi|33151636|ref|NP_872989.1| - 2.6 8.1 8.7 7.1 6.7 0.1 3.9 4 0 0 4 4 4 0 Adenylate kinase, active site lid Rad50_zn_hook PF04423.14 gi|33151636|ref|NP_872989.1| - 3.1 7.7 13.1 6.9 6.6 0.0 4.7 4 1 1 5 5 5 0 Rad50 zinc hook motif Anti-TRAP PF15777.5 gi|33151636|ref|NP_872989.1| - 3.5 7.6 13.6 2.7 8.0 0.1 3.7 4 0 0 4 4 4 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf_UBZ PF18439.1 gi|33151636|ref|NP_872989.1| - 3.7 7.2 11.1 16 5.2 0.1 4.3 5 0 0 5 5 5 0 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS1595 PF12760.7 gi|33151636|ref|NP_872989.1| - 4.3 7.4 26.4 2.4 8.2 1.1 4.4 4 0 0 4 4 4 0 Transposase zinc-ribbon domain Sua5_yciO_yrdC PF01300.18 gi|33151637|ref|NP_872990.1| - 3.4e-34 117.9 0.0 3.7e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Shikimate_dh_N PF08501.11 gi|33151638|ref|NP_872991.1| - 1.3e-18 67.0 0.0 3.3e-18 65.7 0.0 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|33151638|ref|NP_872991.1| - 1.7e-09 37.2 0.1 3.8e-09 36.1 0.1 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|33151638|ref|NP_872991.1| - 1.3e-07 31.8 0.0 3.3e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 gi|33151638|ref|NP_872991.1| - 0.1 12.2 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|33151638|ref|NP_872991.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain N-Term_TEN PF11474.8 gi|33151639|ref|NP_872992.1| - 0.0041 16.8 0.5 0.0041 16.8 0.5 1.0 1 0 0 1 1 1 1 Telomerase reverse transcriptase TEN domain BMFP PF04380.13 gi|33151640|ref|NP_872993.1| - 2.8e-26 91.8 5.0 3e-26 91.7 5.0 1.0 1 0 0 1 1 1 1 Membrane fusogenic activity V-SNARE_C PF12352.8 gi|33151640|ref|NP_872993.1| - 0.0015 18.7 1.7 0.0022 18.2 0.3 1.9 2 1 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus Gal4_dimer PF03902.13 gi|33151640|ref|NP_872993.1| - 0.0064 16.6 3.2 0.38 10.9 0.3 2.3 2 0 0 2 2 2 2 Gal4-like dimerisation domain Phasin PF05597.11 gi|33151640|ref|NP_872993.1| - 0.0074 16.3 3.1 0.21 11.6 0.2 2.1 1 1 1 2 2 2 2 Poly(hydroxyalcanoate) granule associated protein (phasin) HSBP1 PF06825.12 gi|33151640|ref|NP_872993.1| - 0.016 15.0 1.9 0.24 11.3 0.1 2.5 2 1 0 2 2 2 0 Heat shock factor binding protein 1 ApoC-I PF04691.12 gi|33151640|ref|NP_872993.1| - 0.042 13.8 0.5 0.27 11.2 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) DUF5446 PF17522.2 gi|33151640|ref|NP_872993.1| - 0.11 12.7 2.7 0.11 12.6 1.6 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5446) Exonuc_VII_L PF02601.15 gi|33151640|ref|NP_872993.1| - 0.18 11.3 2.9 0.2 11.2 2.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit XhlA PF10779.9 gi|33151640|ref|NP_872993.1| - 0.49 10.6 3.3 0.5 10.6 0.8 2.0 2 1 0 2 2 2 0 Haemolysin XhlA PGI PF00342.19 gi|33151641|ref|NP_872994.1| - 1.2e-256 852.0 1.4 1.3e-256 851.8 1.4 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase SNF PF00209.18 gi|33151642|ref|NP_872995.1| - 3.1e-56 191.2 45.2 1.9e-33 116.0 27.0 2.2 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family MethyltransfD12 PF02086.15 gi|33151643|ref|NP_872996.1| - 3.1e-64 217.2 5.8 3.5e-64 217.0 5.8 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase DUF1564 PF07600.11 gi|33151643|ref|NP_872996.1| - 0.053 13.2 0.4 0.1 12.3 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Cons_hypoth95 PF03602.15 gi|33151643|ref|NP_872996.1| - 0.086 12.5 0.3 0.21 11.2 0.1 1.7 2 1 0 2 2 2 0 Conserved hypothetical protein 95 DHQ_synthase PF01761.20 gi|33151645|ref|NP_872998.1| - 1.9e-108 361.6 0.0 2.3e-108 361.3 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|33151645|ref|NP_872998.1| - 9.9e-16 58.2 2.4 8.3e-15 55.2 2.4 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|33151645|ref|NP_872998.1| - 1.2e-05 24.4 3.2 4e-05 22.6 3.2 1.9 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase SKI PF01202.22 gi|33151646|ref|NP_872999.1| - 4.8e-56 189.3 0.4 5.4e-56 189.1 0.4 1.0 1 0 0 1 1 1 1 Shikimate kinase Cytidylate_kin2 PF13189.6 gi|33151646|ref|NP_872999.1| - 2.8e-09 37.4 0.1 0.0012 19.0 0.0 2.1 1 1 1 2 2 2 2 Cytidylate kinase-like family AAA_18 PF13238.6 gi|33151646|ref|NP_872999.1| - 2.8e-08 34.4 0.1 5.1e-08 33.5 0.1 1.5 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|33151646|ref|NP_872999.1| - 2.2e-06 27.9 0.0 5e-06 26.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|33151646|ref|NP_872999.1| - 1.4e-05 25.0 0.6 5.4e-05 23.0 0.0 2.0 1 1 0 2 2 2 1 Cytidylate kinase AAA PF00004.29 gi|33151646|ref|NP_872999.1| - 0.00085 19.8 0.1 0.0014 19.0 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) dNK PF01712.19 gi|33151646|ref|NP_872999.1| - 0.00087 19.2 0.2 0.17 11.7 0.0 2.3 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_16 PF13191.6 gi|33151646|ref|NP_872999.1| - 0.0013 19.2 0.1 0.0065 16.9 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.6 gi|33151646|ref|NP_872999.1| - 0.0014 19.1 0.8 0.0055 17.1 0.5 2.2 1 1 1 2 2 2 1 AAA domain TsaE PF02367.17 gi|33151646|ref|NP_872999.1| - 0.0022 18.0 0.0 0.0041 17.1 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|33151646|ref|NP_872999.1| - 0.003 17.3 0.0 0.0061 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|33151646|ref|NP_872999.1| - 0.003 18.1 0.3 0.0069 16.9 0.3 1.9 1 1 0 1 1 1 1 ABC transporter CoaE PF01121.20 gi|33151646|ref|NP_872999.1| - 0.0046 16.6 0.6 0.033 13.9 0.0 2.0 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_5 PF07728.14 gi|33151646|ref|NP_872999.1| - 0.0052 16.8 0.0 0.0097 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_PrkA PF08298.11 gi|33151646|ref|NP_872999.1| - 0.011 14.7 0.0 0.026 13.4 0.0 1.6 2 0 0 2 2 2 0 PrkA AAA domain AAA_22 PF13401.6 gi|33151646|ref|NP_872999.1| - 0.011 16.0 0.0 0.014 15.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|33151646|ref|NP_872999.1| - 0.014 14.8 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Ploopntkinase3 PF18751.1 gi|33151646|ref|NP_872999.1| - 0.016 15.1 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 APS_kinase PF01583.20 gi|33151646|ref|NP_872999.1| - 0.019 14.9 0.1 0.034 14.1 0.1 1.7 1 1 0 1 1 1 0 Adenylylsulphate kinase AAA_7 PF12775.7 gi|33151646|ref|NP_872999.1| - 0.028 13.9 0.0 0.044 13.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_2 PF07724.14 gi|33151646|ref|NP_872999.1| - 0.029 14.5 0.8 0.049 13.7 0.6 1.6 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) Thymidylate_kin PF02223.17 gi|33151646|ref|NP_872999.1| - 0.034 13.8 0.0 4.6 6.9 0.0 2.1 2 0 0 2 2 2 0 Thymidylate kinase AAA_28 PF13521.6 gi|33151646|ref|NP_872999.1| - 0.037 14.3 0.0 0.21 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|33151646|ref|NP_872999.1| - 0.043 13.6 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RNA_helicase PF00910.22 gi|33151646|ref|NP_872999.1| - 0.068 13.6 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase DUF1318 PF07027.12 gi|33151646|ref|NP_872999.1| - 0.082 13.4 0.1 0.15 12.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1318) G-alpha PF00503.20 gi|33151646|ref|NP_872999.1| - 0.088 12.0 0.0 0.096 11.8 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit Transgly PF00912.22 gi|33151649|ref|NP_873002.1| - 2.4e-64 216.1 0.0 2.4e-63 212.8 0.0 2.2 2 0 0 2 2 2 1 Transglycosylase Transpeptidase PF00905.22 gi|33151649|ref|NP_873002.1| - 9e-24 84.2 0.6 1.1e-21 77.4 0.0 2.9 2 1 0 2 2 2 2 Penicillin binding protein transpeptidase domain PCB_OB PF17092.5 gi|33151649|ref|NP_873002.1| - 1.1e-06 29.3 0.0 7.1e-06 26.8 0.0 2.4 2 1 0 2 2 2 1 Penicillin-binding protein OB-like domain PilM_2 PF11104.8 gi|33151650|ref|NP_873003.1| - 0.045 12.8 0.0 0.059 12.4 0.0 1.2 1 0 0 1 1 1 0 Type IV pilus assembly protein PilM; VasL PF12486.8 gi|33151653|ref|NP_873006.1| - 0.035 14.0 1.0 0.039 13.8 1.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, EvfB, or VasL UPF0449 PF15136.6 gi|33151653|ref|NP_873006.1| - 0.16 12.4 2.2 0.21 12.1 2.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 SOGA PF11365.8 gi|33151655|ref|NP_873008.1| - 0.0052 17.9 3.7 0.011 16.8 3.7 1.5 1 0 0 1 1 1 1 Protein SOGA SPT_ssu-like PF11779.8 gi|33151655|ref|NP_873008.1| - 0.0057 16.2 5.3 0.0088 15.6 5.3 1.3 1 0 0 1 1 1 1 Small subunit of serine palmitoyltransferase-like DUF2269 PF10027.9 gi|33151655|ref|NP_873008.1| - 0.044 13.8 0.1 0.067 13.3 0.1 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) MscL PF01741.18 gi|33151655|ref|NP_873008.1| - 0.052 13.8 2.6 0.064 13.6 0.6 2.0 1 1 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL MASE2 PF05230.11 gi|33151655|ref|NP_873008.1| - 0.12 12.5 0.1 0.25 11.4 0.1 1.5 1 0 0 1 1 1 0 MASE2 domain LptF_LptG PF03739.14 gi|33151655|ref|NP_873008.1| - 0.15 10.9 3.8 0.19 10.5 3.8 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Exonuc_VII_L PF02601.15 gi|33151655|ref|NP_873008.1| - 0.18 11.4 3.8 0.2 11.2 3.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit UPF0113_N PF17833.1 gi|33151655|ref|NP_873008.1| - 0.32 11.6 3.1 0.57 10.8 2.1 2.0 1 1 1 2 2 2 0 UPF0113 Pre-PUA domain DUF3450 PF11932.8 gi|33151655|ref|NP_873008.1| - 0.38 10.0 9.8 0.55 9.5 9.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) YabA PF06156.13 gi|33151655|ref|NP_873008.1| - 0.81 10.4 8.7 0.24 12.1 3.8 2.0 2 0 0 2 2 2 0 Initiation control protein YabA PilP PF04351.13 gi|33151656|ref|NP_873009.1| - 0.00022 21.2 0.0 0.00029 20.8 0.0 1.2 1 0 0 1 1 1 1 Pilus assembly protein, PilP Secretin PF00263.21 gi|33151657|ref|NP_873010.1| - 3.6e-44 150.4 2.7 5.8e-44 149.7 2.7 1.3 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein Secretin_N PF03958.17 gi|33151657|ref|NP_873010.1| - 2.2e-12 47.2 0.4 1.7e-11 44.4 0.0 2.6 3 0 0 3 3 3 1 Bacterial type II/III secretion system short domain STN PF07660.14 gi|33151657|ref|NP_873010.1| - 0.00019 21.1 0.4 0.035 13.9 0.1 3.4 2 0 0 2 2 2 1 Secretin and TonB N terminus short domain NusB PF01029.18 gi|33151658|ref|NP_873011.1| - 2e-30 105.8 0.0 2.3e-30 105.6 0.0 1.0 1 0 0 1 1 1 1 NusB family AIRS PF00586.24 gi|33151659|ref|NP_873012.1| - 3.7e-21 75.6 0.3 6.6e-21 74.8 0.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|33151659|ref|NP_873012.1| - 2.7e-10 40.6 0.0 4.1e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain PgpA PF04608.13 gi|33151660|ref|NP_873013.1| - 8.6e-47 158.8 7.7 9.7e-47 158.6 7.7 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A DUF4131 PF13567.6 gi|33151660|ref|NP_873013.1| - 1.1 9.0 4.1 1.5 8.5 3.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) SpoU_methylase PF00588.19 gi|33151661|ref|NP_873014.1| - 1.4e-15 57.7 0.4 3.7e-15 56.3 0.4 1.7 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 gi|33151661|ref|NP_873014.1| - 9e-12 45.1 0.0 2.2e-11 43.8 0.0 1.7 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Inositol_P PF00459.25 gi|33151662|ref|NP_873015.1| - 1.2e-68 231.6 0.0 1.4e-68 231.3 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DXP_synthase_N PF13292.6 gi|33151663|ref|NP_873016.1| - 3.3e-120 400.4 0.2 1e-119 398.8 0.1 1.8 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 gi|33151663|ref|NP_873016.1| - 1.5e-42 145.2 0.1 3.1e-42 144.2 0.1 1.5 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|33151663|ref|NP_873016.1| - 2.5e-23 82.3 0.0 5.6e-23 81.2 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transketolase_N PF00456.21 gi|33151663|ref|NP_873016.1| - 6.7e-07 28.6 0.0 0.00099 18.2 0.1 3.0 3 0 0 3 3 3 2 Transketolase, thiamine diphosphate binding domain TPP_enzyme_C PF02775.21 gi|33151663|ref|NP_873016.1| - 7.4e-07 29.1 1.0 1.6e-05 24.7 0.3 2.8 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|33151663|ref|NP_873016.1| - 3.9e-06 26.1 0.3 7.2e-06 25.2 0.3 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component DAHP_synth_1 PF00793.20 gi|33151664|ref|NP_873017.1| - 3.3e-97 324.7 0.0 4e-97 324.4 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family Glyco_transf_9 PF01075.17 gi|33151665|ref|NP_873018.1| - 9.1e-55 185.7 0.4 1.2e-54 185.2 0.4 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) DUF2325 PF10087.9 gi|33151665|ref|NP_873018.1| - 0.005 16.9 0.1 0.024 14.8 0.0 2.1 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2325) Glyco_trans_1_4 PF13692.6 gi|33151665|ref|NP_873018.1| - 0.016 15.6 0.0 0.051 14.0 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferases group 1 Thioredoxin_9 PF14595.6 gi|33151665|ref|NP_873018.1| - 0.024 14.4 0.0 0.061 13.1 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin Peptidase_C39_2 PF13529.6 gi|33151665|ref|NP_873018.1| - 0.074 13.6 2.0 0.18 12.3 0.2 2.3 2 1 0 3 3 3 0 Peptidase_C39 like family PK PF00224.21 gi|33151666|ref|NP_873019.1| - 2.6e-132 440.9 5.4 2.6e-132 440.9 5.4 1.3 2 0 0 2 2 2 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|33151666|ref|NP_873019.1| - 9.3e-30 103.3 1.4 2.1e-29 102.1 0.1 2.3 2 1 0 2 2 2 1 Pyruvate kinase, alpha/beta domain DUF4253 PF14062.6 gi|33151666|ref|NP_873019.1| - 0.08 13.1 0.3 16 5.7 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4253) His_Phos_1 PF00300.22 gi|33151667|ref|NP_873020.1| - 1.2e-11 44.7 0.0 1.5e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Dus PF01207.17 gi|33151668|ref|NP_873021.1| - 2.3e-108 362.0 0.0 2.6e-108 361.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|33151668|ref|NP_873021.1| - 1.9e-07 30.8 0.2 3e-07 30.2 0.2 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein NanE PF04131.14 gi|33151668|ref|NP_873021.1| - 0.00011 21.5 0.0 0.00029 20.1 0.0 1.7 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase PEP_mutase PF13714.6 gi|33151668|ref|NP_873021.1| - 0.00024 20.6 0.1 0.00063 19.3 0.0 1.6 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase Oxidored_FMN PF00724.20 gi|33151668|ref|NP_873021.1| - 0.00032 20.1 0.0 0.0023 17.3 0.0 2.3 2 1 0 2 2 2 1 NADH:flavin oxidoreductase / NADH oxidase family Nucleic_acid_bd PF13820.6 gi|33151668|ref|NP_873021.1| - 0.03 14.2 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Putative nucleic acid-binding region DeoC PF01791.9 gi|33151668|ref|NP_873021.1| - 0.035 13.7 0.3 0.057 13.0 0.3 1.3 1 0 0 1 1 1 0 DeoC/LacD family aldolase Radical_SAM PF04055.21 gi|33151668|ref|NP_873021.1| - 0.079 13.3 0.0 1.2 9.5 0.0 2.1 1 1 1 2 2 2 0 Radical SAM superfamily Pterin_bind PF00809.22 gi|33151668|ref|NP_873021.1| - 0.13 11.9 0.5 0.29 10.8 0.2 1.7 2 0 0 2 2 2 0 Pterin binding enzyme HTH_8 PF02954.19 gi|33151669|ref|NP_873022.1| - 3.5e-16 58.7 0.2 5.5e-16 58.1 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Phage_NinH PF06322.11 gi|33151669|ref|NP_873022.1| - 0.00019 21.3 0.1 0.00033 20.5 0.1 1.4 1 0 0 1 1 1 1 Phage NinH protein HTH_30 PF13556.6 gi|33151669|ref|NP_873022.1| - 0.0081 15.9 0.1 0.021 14.6 0.0 1.7 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain Taeniidae_ag PF05596.11 gi|33151669|ref|NP_873022.1| - 0.08 12.9 0.1 0.38 10.8 0.0 2.0 2 0 0 2 2 2 0 Taeniidae antigen HTH_23 PF13384.6 gi|33151669|ref|NP_873022.1| - 0.09 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_50 PF18024.1 gi|33151669|ref|NP_873022.1| - 0.13 11.9 0.4 0.5 10.0 0.2 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|33151669|ref|NP_873022.1| - 0.13 12.4 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain RWP-RK PF02042.15 gi|33151669|ref|NP_873022.1| - 0.16 11.9 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 RWP-RK domain Amidase_3 PF01520.18 gi|33151670|ref|NP_873023.1| - 3.6e-50 170.5 0.2 6.8e-50 169.6 0.2 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase LysM PF01476.20 gi|33151670|ref|NP_873023.1| - 3.2e-12 46.3 0.6 8.8e-12 44.9 0.6 1.8 1 0 0 1 1 1 1 LysM domain TsaE PF02367.17 gi|33151671|ref|NP_873024.1| - 1.3e-38 131.8 0.0 1.5e-38 131.6 0.0 1.1 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 gi|33151671|ref|NP_873024.1| - 0.0042 16.3 0.0 0.0051 16.0 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain Torsin PF06309.11 gi|33151671|ref|NP_873024.1| - 0.015 15.4 0.0 0.038 14.1 0.0 1.6 2 0 0 2 2 2 0 Torsin AAA_16 PF13191.6 gi|33151671|ref|NP_873024.1| - 0.015 15.6 0.0 0.016 15.6 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.12 gi|33151671|ref|NP_873024.1| - 0.021 14.1 0.0 0.032 13.5 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 gi|33151671|ref|NP_873024.1| - 0.022 15.0 0.0 0.035 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33151671|ref|NP_873024.1| - 0.023 14.6 0.0 0.043 13.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 gi|33151671|ref|NP_873024.1| - 0.027 15.0 0.0 0.035 14.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter cobW PF02492.19 gi|33151671|ref|NP_873024.1| - 0.028 14.0 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|33151671|ref|NP_873024.1| - 0.08 12.8 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|33151671|ref|NP_873024.1| - 0.091 13.3 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|33151671|ref|NP_873024.1| - 0.11 12.9 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase KAP_NTPase PF07693.14 gi|33151671|ref|NP_873024.1| - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain Sigma54_activ_2 PF14532.6 gi|33151671|ref|NP_873024.1| - 0.14 12.3 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain T2SSE PF00437.20 gi|33151671|ref|NP_873024.1| - 0.14 11.2 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein RNase_T PF00929.24 gi|33151672|ref|NP_873025.1| - 2.3e-38 132.3 0.0 2.6e-38 132.2 0.0 1.0 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 gi|33151672|ref|NP_873025.1| - 2.7e-06 27.5 0.1 4e-06 26.9 0.1 1.2 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like CTP_transf_like PF01467.26 gi|33151673|ref|NP_873026.1| - 6.6e-19 68.5 0.0 7.8e-19 68.3 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 gi|33151673|ref|NP_873026.1| - 0.00029 20.6 0.0 0.00049 19.8 0.0 1.5 1 1 0 1 1 1 1 Citrate lyase ligase C-terminal domain DUF1451 PF07295.11 gi|33151673|ref|NP_873026.1| - 0.14 12.2 0.0 0.19 11.7 0.0 1.3 1 1 0 1 1 1 0 Zinc-ribbon containing domain Glycos_transf_N PF04413.16 gi|33151674|ref|NP_873027.1| - 3.9e-63 212.3 0.2 6.5e-63 211.6 0.2 1.4 1 0 0 1 1 1 1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Glycos_transf_1 PF00534.20 gi|33151674|ref|NP_873027.1| - 1.2e-11 44.5 0.0 1.8e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|33151674|ref|NP_873027.1| - 0.0084 16.5 0.0 0.02 15.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|33151674|ref|NP_873027.1| - 0.043 14.3 0.0 1.6 9.2 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferases group 1 Peptidase_U32 PF01136.19 gi|33151675|ref|NP_873028.1| - 4.1e-95 317.4 0.0 7e-95 316.6 0.0 1.3 1 1 0 1 1 1 1 Peptidase family U32 Peptidase_U32_C PF16325.5 gi|33151675|ref|NP_873028.1| - 1.3e-16 60.6 0.0 3.9e-16 59.1 0.0 1.9 1 0 0 1 1 1 1 Peptidase family U32 C-terminal domain Tachystatin_B PF11478.8 gi|33151675|ref|NP_873028.1| - 0.34 10.9 3.8 0.15 12.0 0.5 2.0 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B Cytochrom_B562 PF07361.11 gi|33151676|ref|NP_873029.1| - 8.6e-28 97.0 11.9 1.1e-27 96.7 11.9 1.1 1 0 0 1 1 1 1 Cytochrome b562 MPS2 PF17060.5 gi|33151676|ref|NP_873029.1| - 7.6e-05 22.1 3.9 9.8e-05 21.8 3.9 1.0 1 0 0 1 1 1 1 Monopolar spindle protein 2 APAF1_C PF17908.1 gi|33151676|ref|NP_873029.1| - 0.0015 18.6 1.1 0.01 15.9 1.0 2.1 1 1 0 1 1 1 1 APAF-1 helical domain Bestrophin PF01062.21 gi|33151676|ref|NP_873029.1| - 0.041 13.3 0.9 0.057 12.8 0.9 1.2 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel FAM76 PF16046.5 gi|33151676|ref|NP_873029.1| - 0.12 11.7 6.8 0.067 12.5 4.1 1.7 1 1 1 2 2 2 0 FAM76 protein GlutR_N PF05201.15 gi|33151676|ref|NP_873029.1| - 0.13 12.0 2.4 0.15 11.8 0.2 1.9 2 0 0 2 2 2 0 Glutamyl-tRNAGlu reductase, N-terminal domain PPV_E1_N PF00524.18 gi|33151676|ref|NP_873029.1| - 0.14 12.6 3.2 0.21 12.0 3.0 1.3 1 1 0 1 1 1 0 E1 Protein, N terminal domain Spectrin PF00435.21 gi|33151676|ref|NP_873029.1| - 0.3 11.6 7.4 0.21 12.1 3.4 2.0 1 1 2 3 3 3 0 Spectrin repeat PSII_Pbs27 PF13326.6 gi|33151676|ref|NP_873029.1| - 0.49 10.7 3.6 0.94 9.8 3.6 1.6 1 1 0 1 1 1 0 Photosystem II Pbs27 DUF3970 PF13113.6 gi|33151676|ref|NP_873029.1| - 3.6 7.9 6.1 2.6 8.3 0.4 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3970) AI-2E_transport PF01594.16 gi|33151678|ref|NP_873031.1| - 5.4e-58 196.7 29.5 6e-58 196.5 29.5 1.0 1 0 0 1 1 1 1 AI-2E family transporter Na_Ala_symp PF01235.17 gi|33151680|ref|NP_873033.1| - 8.6e-145 483.0 36.0 1e-144 482.7 36.0 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family Aminotran_5 PF00266.19 gi|33151682|ref|NP_873035.1| - 3.4e-120 401.4 0.1 3.8e-120 401.2 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|33151682|ref|NP_873035.1| - 5.3e-08 32.4 0.1 9.1e-08 31.7 0.1 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II PFK PF00365.20 gi|33151683|ref|NP_873036.1| - 4.2e-107 357.7 0.2 4.9e-107 357.5 0.2 1.0 1 0 0 1 1 1 1 Phosphofructokinase DAGK_cat PF00781.24 gi|33151683|ref|NP_873036.1| - 0.39 10.4 1.5 0.62 9.7 0.0 2.2 3 0 0 3 3 3 0 Diacylglycerol kinase catalytic domain Glycos_transf_2 PF00535.26 gi|33151684|ref|NP_873037.1| - 5.4e-35 120.7 0.3 1e-34 119.8 0.2 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|33151684|ref|NP_873037.1| - 1.5e-21 77.4 0.0 2.1e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|33151684|ref|NP_873037.1| - 2.1e-12 47.1 0.4 3.6e-12 46.3 0.4 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|33151684|ref|NP_873037.1| - 5.5e-05 23.2 0.0 0.00011 22.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|33151684|ref|NP_873037.1| - 0.0019 18.7 0.1 0.0054 17.2 0.1 1.8 1 1 0 1 1 1 1 Glycosyl transferase family 2 Rhamno_transf PF11316.8 gi|33151684|ref|NP_873037.1| - 0.013 14.9 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Putative rhamnosyl transferase YwiC PF14256.6 gi|33151685|ref|NP_873038.1| - 1.3e-38 132.1 6.7 1.3e-38 132.1 6.7 2.3 2 0 0 2 2 2 1 YwiC-like protein Chitin_synth_2 PF03142.15 gi|33151685|ref|NP_873038.1| - 2 7.0 6.4 0.17 10.5 0.2 1.9 2 0 0 2 2 2 0 Chitin synthase PseudoU_synth_2 PF00849.22 gi|33151686|ref|NP_873039.1| - 3.8e-31 108.3 0.0 5.3e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 gi|33151686|ref|NP_873039.1| - 1.2e-07 31.3 0.2 2.2e-07 30.5 0.2 1.4 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 gi|33151686|ref|NP_873039.1| - 0.002 17.9 0.8 0.0056 16.5 0.8 1.7 1 0 0 1 1 1 1 S4 domain YfiO PF13525.6 gi|33151687|ref|NP_873040.1| - 8.2e-56 188.9 7.9 1.1e-55 188.6 7.9 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein TPR_18 PF13512.6 gi|33151687|ref|NP_873040.1| - 9.5e-35 119.8 7.0 1.2e-34 119.6 3.9 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33151687|ref|NP_873040.1| - 8.5e-07 29.2 6.0 0.03 14.9 0.1 4.2 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|33151687|ref|NP_873040.1| - 9.5e-06 25.3 4.7 0.017 15.2 0.1 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|33151687|ref|NP_873040.1| - 7.3e-05 22.9 1.8 0.14 12.4 0.1 2.4 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 gi|33151687|ref|NP_873040.1| - 0.00027 21.5 0.2 0.84 10.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33151687|ref|NP_873040.1| - 0.0011 18.7 1.2 0.063 13.1 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33151687|ref|NP_873040.1| - 0.0015 18.8 2.7 0.91 9.9 0.3 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33151687|ref|NP_873040.1| - 0.0023 18.4 0.4 0.017 15.6 0.0 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33151687|ref|NP_873040.1| - 0.0027 17.8 3.3 0.0078 16.4 0.3 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|33151687|ref|NP_873040.1| - 0.0041 17.8 0.1 4.9 8.2 0.1 2.9 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|33151687|ref|NP_873040.1| - 0.056 13.5 0.3 0.056 13.5 0.3 2.2 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat DUF627 PF04781.12 gi|33151687|ref|NP_873040.1| - 0.074 13.1 0.0 4.8 7.2 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF627) Peptidase_M22 PF00814.25 gi|33151688|ref|NP_873041.1| - 4.5e-103 344.7 0.2 5.1e-103 344.5 0.2 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|33151688|ref|NP_873041.1| - 5.4e-06 26.3 0.0 0.00046 19.9 0.0 2.2 2 0 0 2 2 2 2 Carbamoyltransferase N-terminus BcrAD_BadFG PF01869.20 gi|33151688|ref|NP_873041.1| - 0.013 15.0 0.0 0.092 12.2 0.0 2.2 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family Glucosamine_iso PF01182.20 gi|33151688|ref|NP_873041.1| - 0.18 11.7 0.1 0.35 10.7 0.1 1.4 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Glyco_transf_25 PF01755.17 gi|33151689|ref|NP_873042.1| - 1.5e-52 178.4 5.7 1.5e-52 178.4 5.7 1.6 2 0 0 2 2 2 1 Glycosyltransferase family 25 (LPS biosynthesis protein) RQC PF09382.10 gi|33151690|ref|NP_873043.1| - 2.3e-36 124.0 0.0 8e-36 122.3 0.0 2.0 2 0 0 2 2 2 1 RQC domain HRDC PF00570.23 gi|33151690|ref|NP_873043.1| - 1.1e-23 83.0 0.1 3e-23 81.6 0.0 1.9 2 0 0 2 2 2 1 HRDC domain Helicase_C PF00271.31 gi|33151690|ref|NP_873043.1| - 7.5e-22 77.8 0.2 5.3e-20 71.8 0.2 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|33151690|ref|NP_873043.1| - 1.2e-19 70.8 0.3 8.7e-19 67.9 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 gi|33151690|ref|NP_873043.1| - 2e-14 54.1 0.2 6.3e-14 52.5 0.2 2.0 1 0 0 1 1 1 1 RecQ zinc-binding HEM4 PF02602.15 gi|33151690|ref|NP_873043.1| - 0.0091 15.4 0.0 0.026 13.9 0.0 1.7 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD ResIII PF04851.15 gi|33151690|ref|NP_873043.1| - 0.014 15.4 0.1 0.067 13.2 0.0 2.1 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Helicase_Sgs1 PF11408.8 gi|33151690|ref|NP_873043.1| - 0.017 15.2 0.0 0.041 13.9 0.0 1.6 1 0 0 1 1 1 0 Sgs1 RecQ helicase Enolase_C PF00113.22 gi|33151691|ref|NP_873044.1| - 4.2e-137 456.3 1.9 6.2e-137 455.7 1.9 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|33151691|ref|NP_873044.1| - 5.8e-58 194.7 0.4 1e-57 193.9 0.4 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MAAL_C PF07476.11 gi|33151691|ref|NP_873044.1| - 0.00041 19.6 1.9 0.00081 18.6 0.1 2.0 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus MR_MLE_C PF13378.6 gi|33151691|ref|NP_873044.1| - 0.0018 17.9 0.0 0.0037 16.9 0.0 1.4 1 1 0 1 1 1 1 Enolase C-terminal domain-like tRNA_U5-meth_tr PF05958.11 gi|33151692|ref|NP_873045.1| - 2.5e-16 59.6 0.4 6e-15 55.1 0.4 2.0 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 gi|33151692|ref|NP_873045.1| - 1.6e-10 41.0 0.0 2.2e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|33151692|ref|NP_873045.1| - 8.8e-07 28.6 0.0 1.1e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|33151692|ref|NP_873045.1| - 4.1e-06 27.4 0.0 7.1e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33151692|ref|NP_873045.1| - 0.00028 21.6 0.0 0.00042 21.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33151692|ref|NP_873045.1| - 0.0047 17.6 0.0 0.0079 16.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|33151692|ref|NP_873045.1| - 0.0083 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|33151692|ref|NP_873045.1| - 0.01 15.8 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|33151692|ref|NP_873045.1| - 0.019 14.6 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|33151692|ref|NP_873045.1| - 0.038 13.6 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.18 gi|33151692|ref|NP_873045.1| - 0.074 12.4 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family GFO_IDH_MocA PF01408.22 gi|33151692|ref|NP_873045.1| - 0.1 13.4 0.0 0.2 12.5 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold PCMT PF01135.19 gi|33151692|ref|NP_873045.1| - 0.11 12.3 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AdoHcyase_NAD PF00670.21 gi|33151692|ref|NP_873045.1| - 0.16 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ORF6C PF10552.9 gi|33151693|ref|NP_873046.1| - 2e-06 27.9 0.2 6.8e-06 26.1 0.2 1.8 1 1 0 1 1 1 1 ORF6C domain HTH_19 PF12844.7 gi|33151693|ref|NP_873046.1| - 0.00034 20.6 0.1 0.0026 17.8 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|33151693|ref|NP_873046.1| - 0.016 15.6 0.3 0.038 14.3 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|33151693|ref|NP_873046.1| - 0.038 14.1 0.1 0.15 12.1 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix DUF1018 PF06252.12 gi|33151693|ref|NP_873046.1| - 0.12 13.4 2.0 11 7.1 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1018) HTH_35 PF13693.6 gi|33151694|ref|NP_873047.1| - 1.3e-05 25.1 0.3 1.6e-05 24.9 0.3 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|33151694|ref|NP_873047.1| - 3.1e-05 23.8 0.2 5.6e-05 23.0 0.1 1.5 1 1 0 1 1 1 1 HTH domain YdaS_antitoxin PF15943.5 gi|33151694|ref|NP_873047.1| - 0.00042 20.1 0.2 0.00057 19.7 0.2 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_38 PF13936.6 gi|33151694|ref|NP_873047.1| - 0.013 15.2 0.4 0.043 13.6 0.1 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|33151694|ref|NP_873047.1| - 0.017 14.7 0.2 0.033 13.8 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RecX PF02631.16 gi|33151694|ref|NP_873047.1| - 0.019 15.4 2.5 0.052 14.0 2.5 1.6 1 1 0 1 1 1 0 RecX family Sigma70_r4_2 PF08281.12 gi|33151694|ref|NP_873047.1| - 0.021 14.5 0.2 0.055 13.1 0.1 1.9 1 1 1 2 2 2 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|33151694|ref|NP_873047.1| - 0.025 14.5 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 MarR family KorB PF08535.10 gi|33151694|ref|NP_873047.1| - 0.033 14.2 0.1 0.045 13.8 0.1 1.4 1 0 0 1 1 1 0 KorB domain HTH_17 PF12728.7 gi|33151694|ref|NP_873047.1| - 0.034 14.3 0.1 0.78 10.0 0.1 2.2 1 1 0 1 1 1 0 Helix-turn-helix domain LacI PF00356.21 gi|33151694|ref|NP_873047.1| - 0.035 13.9 0.4 0.08 12.8 0.4 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_23 PF13384.6 gi|33151694|ref|NP_873047.1| - 0.038 13.8 0.1 0.29 11.0 0.0 2.1 1 1 1 2 2 2 0 Homeodomain-like domain HTH_20 PF12840.7 gi|33151694|ref|NP_873047.1| - 0.068 13.2 0.0 0.19 11.8 0.0 1.7 2 1 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|33151694|ref|NP_873047.1| - 0.072 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_10 PF04967.12 gi|33151694|ref|NP_873047.1| - 0.082 12.7 0.5 0.23 11.3 0.1 1.9 1 1 1 2 2 2 0 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|33151694|ref|NP_873047.1| - 0.084 12.4 0.0 0.18 11.4 0.0 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 TrmB PF01978.19 gi|33151694|ref|NP_873047.1| - 0.11 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB P22_Cro PF14549.6 gi|33151694|ref|NP_873047.1| - 0.39 10.6 2.5 1.9 8.4 2.5 2.3 1 1 0 1 1 1 0 DNA-binding transcriptional regulator Cro GerE PF00196.19 gi|33151694|ref|NP_873047.1| - 4.8 6.8 6.3 13 5.4 0.3 2.7 2 1 1 3 3 3 0 Bacterial regulatory proteins, luxR family Baculo_8kDa PF06096.11 gi|33151695|ref|NP_873048.1| - 0.022 14.9 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 Baculoviridae 8.2 KDa protein MMS19_N PF14500.6 gi|33151695|ref|NP_873048.1| - 0.061 12.9 0.0 0.07 12.7 0.0 1.0 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Sigma70_r3 PF04539.16 gi|33151696|ref|NP_873049.1| - 0.043 13.9 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-70 region 3 Peptidase_C32 PF05411.12 gi|33151697|ref|NP_873050.1| - 0.033 14.1 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 Equine arteritis virus putative proteinase CLP1_N PF16573.5 gi|33151697|ref|NP_873050.1| - 0.058 13.6 0.2 0.39 11.0 0.0 2.0 1 1 1 2 2 2 0 N-terminal beta-sandwich domain of polyadenylation factor DUF3164 PF11363.8 gi|33151698|ref|NP_873051.1| - 4.4e-89 297.2 0.4 5e-89 297.1 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3164) YjcQ PF09639.10 gi|33151698|ref|NP_873051.1| - 0.055 13.7 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 YjcQ protein PerC PF06069.11 gi|33151699|ref|NP_873052.1| - 0.0029 17.8 1.8 0.0039 17.4 1.2 1.4 1 1 0 1 1 1 1 PerC transcriptional activator MIT PF04212.18 gi|33151699|ref|NP_873052.1| - 0.025 14.6 0.1 0.043 13.9 0.1 1.5 1 1 0 1 1 1 0 MIT (microtubule interacting and transport) domain DivIVA PF05103.13 gi|33151700|ref|NP_873053.1| - 0.014 15.5 1.0 0.015 15.4 1.0 1.0 1 0 0 1 1 1 0 DivIVA protein Sugarporin_N PF11471.8 gi|33151700|ref|NP_873053.1| - 0.16 12.0 2.8 0.26 11.3 2.8 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Zn_ribbon_recom PF13408.6 gi|33151702|ref|NP_873055.1| - 0.00065 20.2 0.9 0.00078 19.9 0.9 1.2 1 0 0 1 1 1 1 Recombinase zinc beta ribbon domain Zn_Tnp_IS1 PF03811.13 gi|33151702|ref|NP_873055.1| - 0.0013 18.4 0.8 0.002 17.8 0.8 1.3 1 0 0 1 1 1 1 InsA N-terminal domain zf-C4_Topoisom PF01396.19 gi|33151702|ref|NP_873055.1| - 0.0052 16.5 0.3 0.0052 16.5 0.3 1.6 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 gi|33151702|ref|NP_873055.1| - 0.0067 15.8 0.7 0.046 13.1 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|33151702|ref|NP_873055.1| - 0.016 15.2 1.7 0.016 15.2 1.7 2.1 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_ribbon_SprT PF17283.2 gi|33151702|ref|NP_873055.1| - 0.039 13.9 0.8 0.039 13.9 0.8 2.2 3 0 0 3 3 3 0 SprT-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|33151702|ref|NP_873055.1| - 0.24 10.9 3.1 0.39 10.3 0.2 2.4 3 0 0 3 3 3 0 TFIIB zinc-binding DUF551 PF04448.12 gi|33151703|ref|NP_873056.1| - 2.5e-11 44.4 0.1 6.2e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF551) DUF1018 PF06252.12 gi|33151705|ref|NP_873058.1| - 1.2e-25 90.8 0.6 1.6e-25 90.4 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1018) Ras_bdg_2 PF14847.6 gi|33151705|ref|NP_873058.1| - 0.012 15.9 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 Ras-binding domain of Byr2 DRE2_N PF16803.5 gi|33151705|ref|NP_873058.1| - 0.02 15.1 0.0 0.031 14.5 0.0 1.3 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus DUF3368 PF11848.8 gi|33151705|ref|NP_873058.1| - 0.043 13.6 0.0 1.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3368) DUF5456 PF17539.2 gi|33151705|ref|NP_873058.1| - 0.065 13.1 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5456) MAGE PF01454.19 gi|33151705|ref|NP_873058.1| - 0.076 12.7 0.1 0.13 11.9 0.1 1.4 1 1 0 1 1 1 0 MAGE family FKBP_N PF01346.18 gi|33151705|ref|NP_873058.1| - 0.094 13.7 0.8 0.16 13.0 0.8 1.4 1 0 0 1 1 1 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AntA PF08346.12 gi|33151706|ref|NP_873059.1| - 9.1e-28 96.6 0.0 1.7e-27 95.8 0.0 1.5 1 0 0 1 1 1 1 AntA/AntB antirepressor Phage_TAC_8 PF10666.9 gi|33151706|ref|NP_873059.1| - 0.022 15.0 0.1 0.029 14.6 0.1 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone protein Gp14 ()A118 HTH_38 PF13936.6 gi|33151706|ref|NP_873059.1| - 0.077 12.8 0.2 0.16 11.8 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|33151706|ref|NP_873059.1| - 0.098 12.7 0.1 0.35 10.9 0.0 1.9 1 1 1 2 2 2 0 Winged helix-turn helix AbiH PF14253.6 gi|33151707|ref|NP_873060.1| - 0.079 12.8 0.0 0.081 12.8 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH Mor PF08765.11 gi|33151708|ref|NP_873061.1| - 9.3e-11 41.7 0.0 1.5e-09 37.8 0.1 2.0 1 1 1 2 2 2 2 Mor transcription activator family Amidase_2 PF01510.25 gi|33151709|ref|NP_873062.1| - 1.8e-18 67.2 1.1 2.6e-18 66.7 1.1 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase DUF1877 PF08974.10 gi|33151709|ref|NP_873062.1| - 0.02 15.0 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) DUF2062 PF09835.9 gi|33151710|ref|NP_873063.1| - 0.0081 16.0 1.3 0.0097 15.8 1.3 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) DUF2644 PF10841.8 gi|33151711|ref|NP_873064.1| - 8.7e-33 112.4 2.1 1e-32 112.2 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2644) DUF2681 PF10883.8 gi|33151712|ref|NP_873065.1| - 6.7e-33 113.0 4.4 8.5e-33 112.6 4.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) LapA_dom PF06305.11 gi|33151712|ref|NP_873065.1| - 0.0063 16.3 0.9 0.0063 16.3 0.9 1.5 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain HemX PF04375.14 gi|33151712|ref|NP_873065.1| - 0.0086 15.4 3.0 0.01 15.2 3.0 1.0 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1319 PF07028.11 gi|33151713|ref|NP_873066.1| - 0.0032 17.7 0.3 0.0037 17.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1319) EzrA PF06160.12 gi|33151713|ref|NP_873066.1| - 0.0051 15.0 3.7 0.0058 14.9 3.7 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA BAR_2 PF10455.9 gi|33151713|ref|NP_873066.1| - 0.0064 15.7 1.2 0.0072 15.5 1.2 1.1 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking DUF16 PF01519.16 gi|33151713|ref|NP_873066.1| - 0.0088 16.5 1.3 0.012 16.0 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF16 ApoLp-III PF07464.11 gi|33151713|ref|NP_873066.1| - 0.014 15.5 0.5 0.016 15.3 0.5 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Laminin_II PF06009.12 gi|33151713|ref|NP_873066.1| - 0.015 15.3 1.6 0.017 15.1 1.6 1.0 1 0 0 1 1 1 0 Laminin Domain II DivIC PF04977.15 gi|33151713|ref|NP_873066.1| - 0.023 14.5 1.3 0.037 13.8 0.3 1.8 1 1 1 2 2 2 0 Septum formation initiator Snapin_Pallidin PF14712.6 gi|33151713|ref|NP_873066.1| - 0.027 14.9 2.4 0.04 14.3 2.4 1.3 1 1 0 1 1 1 0 Snapin/Pallidin Sec34 PF04136.15 gi|33151713|ref|NP_873066.1| - 0.034 14.0 1.0 0.041 13.8 1.0 1.1 1 0 0 1 1 1 0 Sec34-like family T4SS PF07996.11 gi|33151713|ref|NP_873066.1| - 0.043 14.2 0.5 0.051 14.0 0.5 1.1 1 0 0 1 1 1 0 Type IV secretion system proteins NPV_P10 PF05531.12 gi|33151713|ref|NP_873066.1| - 0.05 14.1 1.0 0.11 13.0 1.0 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein sCache_2 PF17200.4 gi|33151713|ref|NP_873066.1| - 0.051 13.4 0.9 0.1 12.4 0.6 1.5 1 1 1 2 2 2 0 Single Cache domain 2 KxDL PF10241.9 gi|33151713|ref|NP_873066.1| - 0.063 13.6 3.0 0.14 12.4 3.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein Atg14 PF10186.9 gi|33151713|ref|NP_873066.1| - 0.063 12.4 0.8 0.079 12.0 0.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TssO PF17561.2 gi|33151713|ref|NP_873066.1| - 0.083 13.0 3.8 0.33 11.1 3.4 2.0 1 1 0 1 1 1 0 Type VI secretion system, TssO FlaC_arch PF05377.11 gi|33151713|ref|NP_873066.1| - 0.085 13.3 3.0 1.2 9.6 0.8 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF883 PF05957.13 gi|33151713|ref|NP_873066.1| - 0.1 13.2 1.9 0.13 12.9 1.9 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) YojJ PF10372.9 gi|33151713|ref|NP_873066.1| - 0.13 12.4 1.6 2.9 8.1 0.1 2.2 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus Baculo_PEP_C PF04513.12 gi|33151713|ref|NP_873066.1| - 0.14 12.2 0.3 0.32 11.0 0.3 1.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus XhlA PF10779.9 gi|33151713|ref|NP_873066.1| - 0.14 12.3 2.9 3.3 8.0 0.2 2.2 2 0 0 2 2 2 0 Haemolysin XhlA PhoU PF01895.19 gi|33151713|ref|NP_873066.1| - 0.3 11.6 2.8 1.1 9.8 2.8 1.8 1 1 0 1 1 1 0 PhoU domain Med28 PF11594.8 gi|33151714|ref|NP_873067.1| - 0.03 14.4 0.2 0.036 14.1 0.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 28 NPV_P10 PF05531.12 gi|33151714|ref|NP_873067.1| - 0.039 14.4 0.4 0.051 14.0 0.4 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein MtrB PF05440.12 gi|33151714|ref|NP_873067.1| - 0.078 13.4 0.0 0.095 13.1 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B Atg14 PF10186.9 gi|33151714|ref|NP_873067.1| - 0.71 8.9 5.1 0.8 8.7 5.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1804 PF08822.11 gi|33151715|ref|NP_873068.1| - 1.3e-61 207.4 3.1 1.4e-61 207.2 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1804) N-glycanase_N PF09112.10 gi|33151715|ref|NP_873068.1| - 0.031 14.1 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 Peptide-N-glycosidase F, N terminal HTH_28 PF13518.6 gi|33151715|ref|NP_873068.1| - 0.034 14.3 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Fibin PF15819.5 gi|33151715|ref|NP_873068.1| - 0.044 13.5 0.1 0.071 12.9 0.1 1.3 1 0 0 1 1 1 0 Fin bud initiation factor homologue DUF935 PF06074.12 gi|33151717|ref|NP_873070.1| - 1.2e-192 641.4 0.0 1.4e-192 641.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF935) Phage_Mu_F PF04233.14 gi|33151718|ref|NP_873071.1| - 1.2e-27 96.8 0.4 6.4e-27 94.5 0.0 2.4 2 1 1 3 3 3 1 Phage Mu protein F like protein PBECR3 PF18812.1 gi|33151718|ref|NP_873071.1| - 4.3e-17 62.1 0.1 4.3e-17 62.1 0.1 2.5 4 0 0 4 4 4 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 EPOP PF15223.6 gi|33151718|ref|NP_873071.1| - 0.17 11.2 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Elongin BC and Polycomb repressive complex 2-associated protein Phage_tail_S PF05069.13 gi|33151719|ref|NP_873072.1| - 6.5e-21 74.7 0.0 1.5e-20 73.5 0.0 1.5 1 1 0 1 1 1 1 Phage virion morphogenesis family Mu-like_Pro PF10123.9 gi|33151720|ref|NP_873073.1| - 3.4e-102 342.3 5.7 3.9e-102 342.1 5.7 1.0 1 0 0 1 1 1 1 Mu-like prophage I protein Mu-like_gpT PF10124.9 gi|33151721|ref|NP_873074.1| - 4.7e-114 380.6 0.0 5.3e-114 380.4 0.0 1.0 1 0 0 1 1 1 1 Mu-like prophage major head subunit gpT FluMu_N PF17891.1 gi|33151722|ref|NP_873075.1| - 0.0057 16.4 0.0 0.0092 15.7 0.0 1.3 1 0 0 1 1 1 1 Mu-like prophage FluMu N-terminal domain DUF1320 PF07030.12 gi|33151723|ref|NP_873076.1| - 2.8e-33 114.7 1.3 3.3e-33 114.5 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1320) Translat_reg PF01818.17 gi|33151725|ref|NP_873078.1| - 0.1 12.6 0.2 4.4 7.3 0.0 2.2 1 1 1 2 2 2 0 Bacteriophage translational regulator Popeye PF04831.13 gi|33151727|ref|NP_873080.1| - 0.14 12.3 1.2 0.17 12.0 1.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Phage_holin_3_6 PF07332.11 gi|33151727|ref|NP_873080.1| - 1.5 8.8 9.5 1.9 8.5 9.5 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III COX8 PF02285.15 gi|33151727|ref|NP_873080.1| - 2.3 8.2 4.7 0.35 10.8 0.4 1.9 2 1 0 2 2 2 0 Cytochrome oxidase c subunit VIII DASH_Hsk3 PF08227.11 gi|33151728|ref|NP_873081.1| - 0.048 14.0 9.2 31 5.0 0.1 5.8 4 0 0 4 4 4 0 DASH complex subunit Hsk3 like TSC22 PF01166.18 gi|33151728|ref|NP_873081.1| - 0.37 11.1 4.7 3.7 7.9 0.1 3.9 3 0 0 3 3 3 0 TSC-22/dip/bun family Tape_meas_lam_C PF09718.10 gi|33151728|ref|NP_873081.1| - 0.4 10.8 14.7 0.031 14.4 2.1 4.2 4 0 0 4 4 4 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF4251 PF14059.6 gi|33151731|ref|NP_873084.1| - 0.083 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) DUF2163 PF09931.9 gi|33151733|ref|NP_873086.1| - 7.8e-09 35.9 0.1 5.6e-08 33.2 0.1 1.9 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2163) Phage_BR0599 PF09356.10 gi|33151734|ref|NP_873087.1| - 4.2e-24 84.7 0.1 4.8e-24 84.5 0.1 1.0 1 0 0 1 1 1 1 Phage conserved hypothetical protein BR0599 DUF3642 PF12182.8 gi|33151734|ref|NP_873087.1| - 0.0078 16.5 0.0 0.011 16.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial lipoprotein Phage-tail_3 PF13550.6 gi|33151737|ref|NP_873090.1| - 4.4e-19 68.9 0.5 1.3e-18 67.4 0.2 1.9 2 0 0 2 2 2 1 Putative phage tail protein MAM PF00629.23 gi|33151737|ref|NP_873090.1| - 0.0023 17.9 0.0 0.0055 16.6 0.0 1.6 1 0 0 1 1 1 1 MAM domain, meprin/A5/mu Glyco_hydro_3 PF00933.21 gi|33151740|ref|NP_873093.1| - 1.3e-84 284.3 0.0 1.6e-84 284.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain O-FucT PF10250.9 gi|33151740|ref|NP_873093.1| - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 GDP-fucose protein O-fucosyltransferase MutH PF02976.15 gi|33151741|ref|NP_873094.1| - 2.8e-33 114.0 0.0 3.9e-33 113.6 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair enzyme MutH MvaI_BcnI PF15515.6 gi|33151741|ref|NP_873094.1| - 0.057 13.2 0.0 0.13 12.0 0.0 1.5 1 1 1 2 2 2 0 MvaI/BcnI restriction endonuclease family LexA_DNA_bind PF01726.16 gi|33151742|ref|NP_873095.1| - 7.8e-30 102.5 0.1 4.6e-29 100.0 0.0 2.0 2 0 0 2 2 2 1 LexA DNA binding domain Peptidase_S24 PF00717.23 gi|33151742|ref|NP_873095.1| - 5e-15 55.2 0.5 9.4e-15 54.3 0.2 1.6 2 0 0 2 2 2 1 Peptidase S24-like HTH_20 PF12840.7 gi|33151742|ref|NP_873095.1| - 0.017 15.2 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|33151742|ref|NP_873095.1| - 0.04 13.5 0.2 0.56 9.8 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Acyltransferase PF01553.21 gi|33151743|ref|NP_873096.1| - 6.1e-27 93.9 0.0 2e-26 92.2 0.0 1.9 2 0 0 2 2 2 1 Acyltransferase Arm-DNA-bind_2 PF12167.8 gi|33151743|ref|NP_873096.1| - 0.12 12.4 2.9 0.18 11.7 0.1 2.4 2 0 0 2 2 2 0 Arm DNA-binding domain ATP-grasp PF02222.22 gi|33151744|ref|NP_873097.1| - 8.5e-59 198.0 0.0 1.5e-58 197.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|33151744|ref|NP_873097.1| - 2e-07 30.8 0.0 8.3e-07 28.7 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus Epimerase PF01370.21 gi|33151744|ref|NP_873097.1| - 5.4e-06 26.0 0.0 9.4e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family ATP-grasp_3 PF02655.14 gi|33151744|ref|NP_873097.1| - 0.00029 20.9 0.0 0.00084 19.4 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|33151744|ref|NP_873097.1| - 0.00069 19.2 0.0 0.0015 18.1 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain 2-Hacid_dh_C PF02826.19 gi|33151744|ref|NP_873097.1| - 0.00076 18.9 0.0 0.0015 17.9 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GARS_A PF01071.19 gi|33151744|ref|NP_873097.1| - 0.0061 16.4 0.0 0.053 13.3 0.0 2.3 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RmlD_sub_bind PF04321.17 gi|33151744|ref|NP_873097.1| - 0.032 13.4 0.1 0.053 12.6 0.1 1.4 1 1 0 1 1 1 0 RmlD substrate binding domain LytR_C PF13399.6 gi|33151744|ref|NP_873097.1| - 0.041 14.9 0.8 4.6 8.3 0.1 3.0 3 0 0 3 3 3 0 LytR cell envelope-related transcriptional attenuator Shikimate_DH PF01488.20 gi|33151744|ref|NP_873097.1| - 0.074 13.1 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ATPgrasp_N PF18130.1 gi|33151744|ref|NP_873097.1| - 0.09 13.3 1.5 0.87 10.2 0.1 2.7 2 0 0 2 2 2 0 ATP-grasp N-terminal domain LAL_C2 PF18603.1 gi|33151744|ref|NP_873097.1| - 0.13 12.4 1.4 0.15 12.3 0.1 1.8 2 0 0 2 2 1 0 L-amino acid ligase C-terminal domain 2 ATP-grasp_4 PF13535.6 gi|33151744|ref|NP_873097.1| - 0.15 11.7 0.0 0.67 9.5 0.0 2.2 2 1 0 2 2 2 0 ATP-grasp domain Pyr_redox PF00070.27 gi|33151744|ref|NP_873097.1| - 0.33 11.5 2.3 1.9 9.1 0.4 2.7 2 1 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase DNA_pol3_alpha PF07733.12 gi|33151745|ref|NP_873098.1| - 6.4e-104 347.1 0.0 1.2e-103 346.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha NTPase domain DNA_pol3_finger PF17657.1 gi|33151745|ref|NP_873098.1| - 2.2e-63 212.5 0.0 4.4e-63 211.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain PHP PF02811.19 gi|33151745|ref|NP_873098.1| - 4.6e-39 134.4 0.1 2.7e-38 131.9 0.1 2.4 1 1 1 2 2 2 1 PHP domain HHH_6 PF14579.6 gi|33151745|ref|NP_873098.1| - 9.9e-27 93.0 0.0 7.3e-26 90.3 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif tRNA_anti-codon PF01336.25 gi|33151745|ref|NP_873098.1| - 1.9e-08 34.2 0.1 4.1e-08 33.1 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain HHH_3 PF12836.7 gi|33151745|ref|NP_873098.1| - 0.11 12.7 0.0 0.34 11.2 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif LptF_LptG PF03739.14 gi|33151746|ref|NP_873099.1| - 1.5e-64 218.1 14.1 1.7e-64 217.9 14.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Erv26 PF04148.13 gi|33151746|ref|NP_873099.1| - 7.5 6.3 10.2 0.33 10.7 1.3 2.9 3 1 1 4 4 4 0 Transmembrane adaptor Erv26 LptF_LptG PF03739.14 gi|33151747|ref|NP_873100.1| - 1.5e-71 241.1 11.7 1.8e-71 240.8 11.7 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG CopD PF05425.13 gi|33151747|ref|NP_873100.1| - 0.097 13.1 2.8 0.12 12.8 0.9 2.2 2 0 0 2 2 2 0 Copper resistance protein D Peptidase_M17 PF00883.21 gi|33151749|ref|NP_873102.1| - 1.2e-121 405.8 0.1 2e-121 405.1 0.1 1.3 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 gi|33151749|ref|NP_873102.1| - 6.2e-32 110.1 0.0 4.5e-31 107.3 0.0 2.3 2 0 0 2 2 2 1 Cytosol aminopeptidase family, N-terminal domain Pox_MCEL PF03291.16 gi|33151749|ref|NP_873102.1| - 0.087 11.9 0.0 4 6.5 0.1 2.1 2 0 0 2 2 2 0 mRNA capping enzyme Radical_SAM PF04055.21 gi|33151750|ref|NP_873103.1| - 2.1e-14 54.2 0.0 3.4e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|33151750|ref|NP_873103.1| - 7.5e-11 42.2 0.3 1.8e-10 40.9 0.3 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|33151750|ref|NP_873103.1| - 5.5e-08 33.2 0.0 9.5e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain HAD_2 PF13419.6 gi|33151750|ref|NP_873103.1| - 0.052 13.6 0.4 0.26 11.4 0.0 2.0 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase PTPS PF01242.19 gi|33151751|ref|NP_873104.1| - 2.7e-35 121.0 0.0 3.1e-35 120.8 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase QueC PF06508.13 gi|33151752|ref|NP_873105.1| - 4.1e-74 248.6 0.2 4.7e-74 248.4 0.2 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|33151752|ref|NP_873105.1| - 1.6e-06 27.4 0.0 1.4e-05 24.3 0.0 1.9 2 0 0 2 2 2 1 NAD synthase Diphthami_syn_2 PF01902.17 gi|33151752|ref|NP_873105.1| - 0.00017 21.1 0.0 0.00024 20.7 0.0 1.2 1 0 0 1 1 1 1 Diphthamide synthase ThiI PF02568.14 gi|33151752|ref|NP_873105.1| - 0.00055 19.6 0.0 0.002 17.8 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|33151752|ref|NP_873105.1| - 0.00066 19.4 0.0 0.00066 19.4 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 gi|33151752|ref|NP_873105.1| - 0.002 17.9 0.0 0.0095 15.7 0.0 1.9 2 0 0 2 2 2 1 PP-loop family VWA PF00092.28 gi|33151752|ref|NP_873105.1| - 0.017 15.4 0.0 0.027 14.7 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain NifU PF01106.17 gi|33151752|ref|NP_873105.1| - 0.12 12.6 0.0 0.29 11.3 0.0 1.7 1 0 0 1 1 1 0 NifU-like domain AIRS_C PF02769.22 gi|33151755|ref|NP_873108.1| - 1.3e-21 77.4 0.0 2.1e-21 76.7 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|33151755|ref|NP_873108.1| - 1e-16 61.3 0.6 1.8e-16 60.6 0.6 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain DUF1294 PF06961.13 gi|33151756|ref|NP_873109.1| - 7.2e-21 74.2 1.8 9.5e-21 73.8 0.9 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1294) TRAM_LAG1_CLN8 PF03798.16 gi|33151756|ref|NP_873109.1| - 0.0029 17.4 9.9 0.0032 17.2 9.9 1.0 1 0 0 1 1 1 1 TLC domain DUF3147 PF11345.8 gi|33151756|ref|NP_873109.1| - 0.074 13.4 3.5 0.084 13.3 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3147) DUF3285 PF11688.8 gi|33151756|ref|NP_873109.1| - 0.26 11.2 7.4 1.6 8.7 0.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3285) DUF2663 PF10864.8 gi|33151756|ref|NP_873109.1| - 1.1 9.7 6.1 0.27 11.7 1.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) DUF3789 PF12664.7 gi|33151756|ref|NP_873109.1| - 1.2 8.9 4.4 2.2 8.1 4.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) DUF2681 PF10883.8 gi|33151756|ref|NP_873109.1| - 2 8.8 4.1 13 6.3 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) DUF3290 PF11694.8 gi|33151756|ref|NP_873109.1| - 3 7.8 7.0 0.68 9.9 1.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) DUF4199 PF13858.6 gi|33151756|ref|NP_873109.1| - 3.9 7.9 10.0 9.9 6.5 10.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) LapA_dom PF06305.11 gi|33151756|ref|NP_873109.1| - 4.5 7.2 5.9 9.4 6.1 0.4 2.6 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain Lyase_1 PF00206.20 gi|33151757|ref|NP_873110.1| - 1.6e-102 343.1 0.1 1.9e-102 342.8 0.1 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|33151757|ref|NP_873110.1| - 3.3e-17 62.7 0.0 8.2e-17 61.4 0.0 1.8 1 0 0 1 1 1 1 Fumarase C C-terminus Integrase_Zn PF02022.19 gi|33151757|ref|NP_873110.1| - 0.27 11.2 0.4 0.61 10.1 0.4 1.6 1 0 0 1 1 1 0 Integrase Zinc binding domain AAA_2 PF07724.14 gi|33151758|ref|NP_873111.1| - 2.8e-61 206.6 0.1 2.7e-57 193.6 0.0 3.0 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 gi|33151758|ref|NP_873111.1| - 2.5e-36 123.8 4.6 2.5e-36 123.8 4.6 3.3 3 0 0 3 3 3 1 AAA lid domain AAA PF00004.29 gi|33151758|ref|NP_873111.1| - 1.7e-25 89.9 0.1 1e-13 51.8 0.0 3.3 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 gi|33151758|ref|NP_873111.1| - 8.6e-25 86.6 0.6 2.8e-11 43.4 0.1 3.2 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component ClpB_D2-small PF10431.9 gi|33151758|ref|NP_873111.1| - 2.3e-24 85.3 2.8 3e-24 84.9 0.3 2.8 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 gi|33151758|ref|NP_873111.1| - 3.4e-20 72.4 0.8 2.3e-13 50.4 0.0 3.8 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|33151758|ref|NP_873111.1| - 4.9e-09 36.8 16.0 2.3e-05 24.9 0.1 5.9 5 3 1 7 7 6 2 AAA ATPase domain Sigma54_activat PF00158.26 gi|33151758|ref|NP_873111.1| - 1.1e-08 34.9 0.5 2.5e-05 24.0 0.0 3.3 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_14 PF13173.6 gi|33151758|ref|NP_873111.1| - 2.1e-07 31.0 0.1 0.029 14.4 0.0 3.8 3 1 0 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|33151758|ref|NP_873111.1| - 2.1e-07 31.3 8.9 0.018 15.3 0.1 5.5 4 3 0 4 4 4 2 AAA domain IstB_IS21 PF01695.17 gi|33151758|ref|NP_873111.1| - 4e-07 29.9 1.2 0.064 13.0 0.0 4.2 4 0 0 4 4 4 2 IstB-like ATP binding protein AAA_18 PF13238.6 gi|33151758|ref|NP_873111.1| - 3.5e-06 27.6 0.1 1.5 9.4 0.1 4.2 3 0 0 3 3 3 2 AAA domain TniB PF05621.11 gi|33151758|ref|NP_873111.1| - 5.8e-06 25.8 0.0 0.007 15.8 0.0 3.5 2 1 0 2 2 2 1 Bacterial TniB protein AAA_33 PF13671.6 gi|33151758|ref|NP_873111.1| - 9.8e-06 25.8 1.2 0.07 13.3 0.1 4.5 3 1 0 3 3 3 1 AAA domain AAA_7 PF12775.7 gi|33151758|ref|NP_873111.1| - 1.4e-05 24.7 0.0 0.052 13.1 0.0 2.8 2 1 0 2 2 2 2 P-loop containing dynein motor region RuvB_N PF05496.12 gi|33151758|ref|NP_873111.1| - 3.4e-05 23.6 4.9 0.74 9.5 0.5 4.9 4 1 0 4 4 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 gi|33151758|ref|NP_873111.1| - 4.3e-05 23.3 0.0 0.17 11.6 0.0 3.0 2 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|33151758|ref|NP_873111.1| - 0.00012 21.5 0.1 1.7 8.0 0.0 3.7 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|33151758|ref|NP_873111.1| - 0.00035 20.9 0.0 2.1 8.8 0.0 3.2 3 0 0 3 3 2 2 RNA helicase ATPase_2 PF01637.18 gi|33151758|ref|NP_873111.1| - 0.00038 20.5 8.9 0.99 9.3 0.0 4.8 4 3 1 5 5 4 2 ATPase domain predominantly from Archaea Roc PF08477.13 gi|33151758|ref|NP_873111.1| - 0.00047 20.4 0.0 1.8 8.8 0.0 2.6 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 gi|33151758|ref|NP_873111.1| - 0.00048 20.1 0.0 1.5 8.9 0.0 3.1 3 0 0 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|33151758|ref|NP_873111.1| - 0.00054 19.9 0.1 0.13 12.1 0.0 3.9 3 1 0 3 3 3 1 NACHT domain AAA_19 PF13245.6 gi|33151758|ref|NP_873111.1| - 0.00088 19.6 0.4 0.032 14.6 0.1 3.4 2 1 0 3 3 3 1 AAA domain AAA_3 PF07726.11 gi|33151758|ref|NP_873111.1| - 0.0013 18.6 0.1 1.3 8.9 0.0 3.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 gi|33151758|ref|NP_873111.1| - 0.0016 17.7 1.0 0.24 10.5 0.1 3.5 3 1 0 3 3 3 1 Protein of unknown function (DUF815) RsgA_GTPase PF03193.16 gi|33151758|ref|NP_873111.1| - 0.0038 17.2 3.2 1.5 8.7 0.0 3.6 4 1 0 4 4 3 1 RsgA GTPase NTPase_1 PF03266.15 gi|33151758|ref|NP_873111.1| - 0.0071 16.3 0.1 4.3 7.2 0.0 4.2 3 0 0 3 3 3 1 NTPase AAA_28 PF13521.6 gi|33151758|ref|NP_873111.1| - 0.0075 16.5 4.9 4.2 7.6 0.0 4.9 5 2 0 5 5 4 1 AAA domain Zeta_toxin PF06414.12 gi|33151758|ref|NP_873111.1| - 0.016 14.5 0.0 6.3 6.0 0.0 3.3 3 0 0 3 3 3 0 Zeta toxin AAA_25 PF13481.6 gi|33151758|ref|NP_873111.1| - 0.024 14.2 1.4 0.2 11.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain DNA_pol3_delta2 PF13177.6 gi|33151758|ref|NP_873111.1| - 0.027 14.3 0.0 5.3 6.8 0.0 2.8 2 0 0 2 2 2 0 DNA polymerase III, delta subunit ABC_tran PF00005.27 gi|33151758|ref|NP_873111.1| - 0.033 14.7 7.3 1.9 9.0 0.0 4.5 4 1 0 4 4 4 0 ABC transporter SRP54 PF00448.22 gi|33151758|ref|NP_873111.1| - 0.049 13.2 0.2 6.9 6.2 0.0 3.4 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 gi|33151758|ref|NP_873111.1| - 0.065 13.0 0.0 10 5.9 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Torsin PF06309.11 gi|33151758|ref|NP_873111.1| - 0.082 13.0 0.0 0.34 11.0 0.0 2.0 2 0 0 2 2 1 0 Torsin CbiA PF01656.23 gi|33151758|ref|NP_873111.1| - 0.53 10.3 1.6 26 4.9 0.0 3.8 3 1 1 4 4 4 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.6 gi|33151758|ref|NP_873111.1| - 1.1 9.7 24.5 24 5.3 0.0 4.7 2 1 1 3 3 3 0 AAA domain Peptidase_M20 PF01546.28 gi|33151759|ref|NP_873112.1| - 6.4e-24 84.8 0.0 7.8e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|33151759|ref|NP_873112.1| - 2.1e-22 79.1 0.0 3.5e-22 78.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|33151759|ref|NP_873112.1| - 4e-05 23.4 0.0 8.1e-05 22.4 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 gi|33151759|ref|NP_873112.1| - 0.039 13.0 0.0 0.079 12.0 0.0 1.5 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase AA_permease_2 PF13520.6 gi|33151761|ref|NP_873114.1| - 1.5e-69 234.9 48.8 1.9e-69 234.5 48.8 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|33151761|ref|NP_873114.1| - 1.9e-16 59.8 46.2 2.5e-16 59.3 46.2 1.1 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|33151761|ref|NP_873114.1| - 2.5e-05 23.3 17.7 2.5e-05 23.3 17.7 2.5 1 1 0 2 2 2 1 Spore germination protein ERGIC_N PF13850.6 gi|33151761|ref|NP_873114.1| - 0.5 10.8 4.7 2.8 8.4 0.0 3.4 3 0 0 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) S-AdoMet_synt_C PF02773.16 gi|161511521|ref|NP_873115.2| - 5.1e-70 233.8 0.1 1.6e-69 232.2 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 gi|161511521|ref|NP_873115.2| - 3.1e-45 153.3 0.1 1.3e-44 151.3 0.0 1.9 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 gi|161511521|ref|NP_873115.2| - 1.2e-41 141.3 0.1 2.4e-41 140.4 0.1 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 gi|161511521|ref|NP_873115.2| - 0.074 11.8 0.0 0.6 8.8 0.0 2.1 2 1 0 2 2 2 0 S-adenosylmethionine synthetase (AdoMet synthetase) TatD_DNase PF01026.21 gi|33151763|ref|NP_873116.1| - 4.4e-41 140.9 0.4 5.2e-41 140.7 0.4 1.0 1 0 0 1 1 1 1 TatD related DNase L27_N PF09060.10 gi|33151763|ref|NP_873116.1| - 0.081 13.0 1.5 0.19 11.8 0.0 2.4 3 0 0 3 3 3 0 L27_N UvrD_C PF13361.6 gi|33151764|ref|NP_873117.1| - 4.2e-75 253.3 13.5 8.1e-75 252.4 8.9 2.3 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain UvrD-helicase PF00580.21 gi|33151764|ref|NP_873117.1| - 2.2e-74 250.8 5.8 2.2e-74 250.8 5.8 3.2 2 2 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|33151764|ref|NP_873117.1| - 1.6e-34 119.3 0.1 6.5e-34 117.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 gi|33151764|ref|NP_873117.1| - 7.2e-10 38.5 0.0 2.9e-09 36.6 0.0 2.0 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|33151764|ref|NP_873117.1| - 1.3e-08 34.8 0.2 0.00017 21.3 0.1 2.6 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 gi|33151764|ref|NP_873117.1| - 2.4e-05 24.2 0.8 0.07 12.9 0.0 3.4 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 gi|33151764|ref|NP_873117.1| - 0.017 14.9 0.1 0.047 13.5 0.1 1.7 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|33151764|ref|NP_873117.1| - 0.046 13.2 0.3 1 8.8 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein DEAD PF00270.29 gi|33151764|ref|NP_873117.1| - 0.29 10.9 1.5 0.97 9.2 0.2 2.5 2 1 1 3 3 3 0 DEAD/DEAH box helicase ABC_tran PF00005.27 gi|33151765|ref|NP_873118.1| - 6.2e-35 120.7 0.0 1.1e-34 119.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|33151765|ref|NP_873118.1| - 8.5e-08 32.3 0.0 2e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|33151765|ref|NP_873118.1| - 3.7e-07 30.3 0.2 0.005 16.7 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|33151765|ref|NP_873118.1| - 5.6e-06 26.7 0.5 3e-05 24.3 0.5 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|33151765|ref|NP_873118.1| - 1.5e-05 24.5 0.3 0.0036 16.8 0.2 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain TniB PF05621.11 gi|33151765|ref|NP_873118.1| - 0.00064 19.2 0.7 0.017 14.6 0.4 2.4 2 0 0 2 2 2 1 Bacterial TniB protein AAA PF00004.29 gi|33151765|ref|NP_873118.1| - 0.002 18.5 0.7 0.036 14.5 0.7 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|33151765|ref|NP_873118.1| - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain ABC_ATPase PF09818.9 gi|33151765|ref|NP_873118.1| - 0.0071 15.2 0.0 0.07 11.9 0.0 2.2 1 1 0 1 1 1 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|33151765|ref|NP_873118.1| - 0.0081 16.1 0.3 0.053 13.4 0.1 2.1 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|33151765|ref|NP_873118.1| - 0.011 16.2 0.1 0.023 15.1 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain sCache_3_2 PF17203.4 gi|33151765|ref|NP_873118.1| - 0.011 15.9 0.0 0.018 15.2 0.0 1.3 1 0 0 1 1 1 0 Single cache domain 3 HSM3_N PF18795.1 gi|33151765|ref|NP_873118.1| - 0.012 15.0 0.0 0.019 14.4 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain AAA_28 PF13521.6 gi|33151765|ref|NP_873118.1| - 0.025 14.8 1.4 2.3 8.4 0.2 2.7 2 1 1 3 3 3 0 AAA domain AAA_23 PF13476.6 gi|33151765|ref|NP_873118.1| - 0.03 14.8 2.5 0.07 13.6 0.3 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|33151765|ref|NP_873118.1| - 0.077 12.6 0.0 2.7 7.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|33151765|ref|NP_873118.1| - 0.084 12.9 0.0 0.95 9.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|33151765|ref|NP_873118.1| - 0.093 12.4 0.1 3.9 7.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|33151765|ref|NP_873118.1| - 0.11 13.1 1.1 0.37 11.3 0.1 2.6 2 2 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|33151766|ref|NP_873119.1| - 2.4e-16 60.0 14.1 2.4e-16 60.0 14.1 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component MadM PF03818.13 gi|33151766|ref|NP_873119.1| - 0.45 10.4 7.2 40 4.2 0.0 4.3 4 0 0 4 4 4 0 Malonate/sodium symporter MadM subunit BPD_transp_1 PF00528.22 gi|33151767|ref|NP_873120.1| - 1.5e-19 70.4 14.1 1.5e-19 70.4 14.1 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PCRF PF03462.18 gi|33151768|ref|NP_873121.1| - 1.6e-57 194.5 2.7 1.7e-57 194.4 0.3 1.9 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 gi|33151768|ref|NP_873121.1| - 1.4e-42 144.3 0.9 3.2e-42 143.1 0.9 1.6 1 0 0 1 1 1 1 RF-1 domain ABC_tran_CTD PF16326.5 gi|33151768|ref|NP_873121.1| - 0.25 11.6 0.1 0.25 11.6 0.1 3.4 3 1 1 4 4 4 0 ABC transporter C-terminal domain AIRS_C PF02769.22 gi|33151769|ref|NP_873122.1| - 2.8e-25 89.3 0.0 4.6e-25 88.6 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|33151769|ref|NP_873122.1| - 1.6e-18 67.1 1.1 3.1e-18 66.2 0.5 1.8 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain Chal_sti_synt_C PF02797.15 gi|33151770|ref|NP_873123.1| - 0.05 13.6 0.4 0.084 12.9 0.4 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain DUF1690 PF07956.11 gi|33151770|ref|NP_873123.1| - 0.59 10.6 14.3 0.69 10.3 12.6 1.9 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) IZUMO PF15005.6 gi|33151770|ref|NP_873123.1| - 4.7 7.7 6.9 5.6 7.5 3.7 2.1 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated FAM76 PF16046.5 gi|33151770|ref|NP_873123.1| - 8.5 5.6 11.9 11 5.3 11.9 1.1 1 0 0 1 1 1 0 FAM76 protein 4HB_MCP_1 PF12729.7 gi|33151771|ref|NP_873124.1| - 0.062 12.8 9.9 0.12 11.9 9.0 1.7 1 1 1 2 2 2 0 Four helix bundle sensory module for signal transduction DUF4971 PF16341.5 gi|33151771|ref|NP_873124.1| - 0.1 12.4 0.8 13 5.6 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4971) Vir_act_alpha_C PF10400.9 gi|33151771|ref|NP_873124.1| - 0.11 13.2 6.1 0.25 12.1 0.1 2.9 1 1 2 3 3 3 0 Virulence activator alpha C-term MRFAP1 PF15155.6 gi|33151771|ref|NP_873124.1| - 0.14 12.6 3.1 0.27 11.8 3.1 1.4 1 1 0 1 1 1 0 MORF4 family-associated protein1 GIDA PF01134.22 gi|33151771|ref|NP_873124.1| - 0.16 11.0 3.7 0.57 9.2 3.7 1.8 1 1 0 1 1 1 0 Glucose inhibited division protein A Metal_resist PF13801.6 gi|33151771|ref|NP_873124.1| - 0.62 10.3 6.5 0.12 12.6 2.0 2.1 2 1 0 2 2 2 0 Heavy-metal resistance DUF507 PF04368.13 gi|33151771|ref|NP_873124.1| - 0.72 9.8 9.2 3.1 7.7 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF507) SLATT_5 PF18160.1 gi|33151771|ref|NP_873124.1| - 3.8 6.8 7.3 0.58 9.4 0.4 2.6 2 2 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain family 5 MerR-DNA-bind PF09278.11 gi|33151771|ref|NP_873124.1| - 8.8 7.0 9.2 1.5 9.4 2.8 2.7 1 1 2 3 3 3 0 MerR, DNA binding Fzo_mitofusin PF04799.13 gi|33151771|ref|NP_873124.1| - 8.8 5.9 11.3 7.2 6.1 3.2 2.1 1 1 1 2 2 2 0 fzo-like conserved region FAD_binding_3 PF01494.19 gi|33151772|ref|NP_873125.1| - 5.8e-33 114.6 0.0 7.4e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 gi|33151772|ref|NP_873125.1| - 1.3e-05 24.4 0.0 4.6e-05 22.6 0.0 2.0 1 1 0 1 1 1 1 Squalene epoxidase Lycopene_cycl PF05834.12 gi|33151772|ref|NP_873125.1| - 4.4e-05 22.7 0.1 0.013 14.6 0.0 2.7 2 1 0 2 2 2 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|33151772|ref|NP_873125.1| - 0.0012 17.7 0.0 2.1 7.1 0.0 2.9 3 0 0 3 3 3 2 Tryptophan halogenase Pyr_redox PF00070.27 gi|33151772|ref|NP_873125.1| - 0.0021 18.5 0.0 0.0086 16.6 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|33151772|ref|NP_873125.1| - 0.0036 17.5 0.0 0.0083 16.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 gi|33151772|ref|NP_873125.1| - 0.0048 17.1 0.0 0.013 15.7 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain Pyr_redox_2 PF07992.14 gi|33151772|ref|NP_873125.1| - 0.0077 15.5 0.1 0.075 12.3 0.0 2.1 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|33151772|ref|NP_873125.1| - 0.011 15.4 0.1 0.037 13.6 0.1 1.7 1 1 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|33151772|ref|NP_873125.1| - 0.028 14.4 0.0 0.26 11.3 0.0 2.3 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|33151772|ref|NP_873125.1| - 0.037 14.5 0.0 0.18 12.3 0.0 2.2 1 1 1 2 2 2 0 Putative NAD(P)-binding Pyr_redox_3 PF13738.6 gi|33151772|ref|NP_873125.1| - 0.054 12.7 0.0 0.089 12.0 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|33151772|ref|NP_873125.1| - 0.061 13.8 0.1 0.19 12.3 0.0 2.0 2 1 1 3 3 3 0 XdhC Rossmann domain ATP_bind_2 PF03668.15 gi|33151773|ref|NP_873126.1| - 2.2e-119 398.0 0.0 2.5e-119 397.8 0.0 1.0 1 0 0 1 1 1 1 P-loop ATPase protein family AAA_18 PF13238.6 gi|33151773|ref|NP_873126.1| - 0.0011 19.5 0.2 2.9 8.4 0.0 3.6 1 1 2 4 4 4 1 AAA domain AAA_33 PF13671.6 gi|33151773|ref|NP_873126.1| - 0.0016 18.6 0.0 0.0099 16.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain Integrase_1 PF12835.7 gi|33151773|ref|NP_873126.1| - 0.0049 17.0 0.0 0.0099 16.0 0.0 1.5 1 0 0 1 1 1 1 Integrase AAA_16 PF13191.6 gi|33151773|ref|NP_873126.1| - 0.013 15.9 0.1 0.032 14.6 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain CPT PF07931.12 gi|33151773|ref|NP_873126.1| - 0.023 14.5 0.0 3.2 7.6 0.0 2.2 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein FtsK_SpoIIIE PF01580.18 gi|33151773|ref|NP_873126.1| - 0.06 12.7 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Zeta_toxin PF06414.12 gi|33151773|ref|NP_873126.1| - 0.071 12.4 0.0 2.4 7.4 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_28 PF13521.6 gi|33151773|ref|NP_873126.1| - 0.089 13.0 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|33151773|ref|NP_873126.1| - 0.11 12.7 0.2 0.41 10.9 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|33151773|ref|NP_873126.1| - 0.12 12.1 0.1 0.23 11.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|33151773|ref|NP_873126.1| - 0.16 12.5 0.0 0.54 10.8 0.0 1.8 2 0 0 2 2 2 0 ABC transporter PTS_EIIA_2 PF00359.22 gi|33151774|ref|NP_873127.1| - 7.4e-41 139.4 0.0 9e-41 139.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC_tran PF00005.27 gi|33151775|ref|NP_873128.1| - 1.1e-34 119.9 0.0 1.7e-34 119.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 gi|33151775|ref|NP_873128.1| - 4.4e-09 36.0 0.0 1e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 gi|33151775|ref|NP_873128.1| - 0.0001 22.2 0.1 0.026 14.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33151775|ref|NP_873128.1| - 0.0044 16.5 0.3 0.13 11.7 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|33151775|ref|NP_873128.1| - 0.038 14.5 0.1 0.13 12.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain Pectate_lyase_2 PF06917.12 gi|33151775|ref|NP_873128.1| - 0.048 12.2 0.0 0.068 11.7 0.0 1.1 1 0 0 1 1 1 0 Periplasmic pectate lyase T2SSE PF00437.20 gi|33151775|ref|NP_873128.1| - 0.066 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_19 PF13245.6 gi|33151775|ref|NP_873128.1| - 0.075 13.4 0.0 0.095 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|33151775|ref|NP_873128.1| - 0.087 13.1 0.2 0.84 9.9 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit OstA PF03968.14 gi|33151776|ref|NP_873129.1| - 1e-28 99.8 4.7 1.3e-28 99.5 4.7 1.1 1 0 0 1 1 1 1 OstA-like protein OstA_2 PF13100.6 gi|33151776|ref|NP_873129.1| - 0.00026 20.6 0.3 0.00036 20.2 0.3 1.2 1 0 0 1 1 1 1 OstA-like protein FTP PF07504.13 gi|33151776|ref|NP_873129.1| - 0.039 13.8 0.1 0.081 12.8 0.1 1.5 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif LptC PF06835.13 gi|33151776|ref|NP_873129.1| - 0.19 11.3 6.7 3.5 7.2 1.7 2.1 1 1 1 2 2 2 0 Lipopolysaccharide-assembly, LptC-related Copper-bind PF00127.20 gi|33151776|ref|NP_873129.1| - 0.23 11.9 2.2 0.43 11.0 0.6 1.9 1 1 1 2 2 2 0 Copper binding proteins, plastocyanin/azurin family LptC PF06835.13 gi|33151777|ref|NP_873130.1| - 3.5e-52 176.5 3.6 3.9e-52 176.4 3.6 1.0 1 0 0 1 1 1 1 Lipopolysaccharide-assembly, LptC-related WxL PF13731.6 gi|33151777|ref|NP_873130.1| - 0.0051 16.9 1.2 0.0061 16.6 1.2 1.1 1 0 0 1 1 1 1 WxL domain surface cell wall-binding TPM_phosphatase PF04536.14 gi|33151778|ref|NP_873131.1| - 1.3e-36 125.5 0.0 1.7e-36 125.1 0.0 1.2 1 0 0 1 1 1 1 TPM domain MOLO1 PF17175.4 gi|33151778|ref|NP_873131.1| - 0.13 12.4 0.0 0.45 10.7 0.0 1.9 1 1 0 1 1 1 0 Modulator of levamisole receptor-1 TPM_phosphatase PF04536.14 gi|33151779|ref|NP_873132.1| - 6e-17 62.0 0.0 6.8e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 TPM domain COE1_HLH PF16423.5 gi|33151779|ref|NP_873132.1| - 0.013 15.2 0.0 0.026 14.2 0.0 1.5 1 0 0 1 1 1 0 Transcription factor COE1 helix-loop-helix domain LemA PF04011.12 gi|33151780|ref|NP_873133.1| - 4e-55 185.8 5.3 4.9e-55 185.5 5.3 1.1 1 0 0 1 1 1 1 LemA family PEP-utilisers_N PF05524.13 gi|33151780|ref|NP_873133.1| - 0.00029 21.0 0.6 0.0005 20.2 0.4 1.5 1 1 0 1 1 1 1 PEP-utilising enzyme, N-terminal UPF0160 PF03690.13 gi|33151780|ref|NP_873133.1| - 0.0021 17.7 1.0 0.003 17.2 1.0 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0160) FliD_N PF02465.18 gi|33151780|ref|NP_873133.1| - 0.019 15.6 2.1 0.23 12.2 1.0 2.5 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus SHNi-TPR PF10516.9 gi|33151780|ref|NP_873133.1| - 0.036 13.5 0.6 0.22 11.0 0.0 2.3 2 0 0 2 2 2 0 SHNi-TPR SCO1-SenC PF02630.14 gi|33151780|ref|NP_873133.1| - 0.076 12.9 0.1 0.26 11.2 0.0 1.9 2 1 0 2 2 2 0 SCO1/SenC zf-C2H2_jaz PF12171.8 gi|33151781|ref|NP_873134.1| - 0.69 10.3 6.9 3.6 8.0 6.9 2.0 1 1 0 1 1 1 0 Zinc-finger double-stranded RNA-binding RuvC PF02075.17 gi|33151782|ref|NP_873135.1| - 8.9e-63 210.6 0.7 1.2e-62 210.2 0.7 1.1 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC DUF3882 PF07066.11 gi|33151782|ref|NP_873135.1| - 0.08 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Lactococcus phage M3 protein DUF2827 PF10933.8 gi|33151783|ref|NP_873136.1| - 0.011 14.4 0.6 0.013 14.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2827) DUF1344 PF07076.11 gi|33151783|ref|NP_873136.1| - 0.042 13.8 0.0 0.13 12.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1344) MliC PF09864.9 gi|33151783|ref|NP_873136.1| - 0.061 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme Transcrip_reg PF01709.20 gi|33151784|ref|NP_873137.1| - 2.5e-92 308.6 0.0 2.8e-92 308.5 0.0 1.0 1 0 0 1 1 1 1 Transcriptional regulator NUDIX PF00293.28 gi|33151785|ref|NP_873138.1| - 3.9e-19 69.0 0.0 4.6e-19 68.8 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain tRNA-synt_2 PF00152.20 gi|33151787|ref|NP_873140.1| - 4.4e-107 357.8 0.0 5.8e-107 357.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) GAD PF02938.14 gi|33151787|ref|NP_873140.1| - 1.8e-31 108.2 0.1 5.3e-31 106.7 0.1 1.9 1 0 0 1 1 1 1 GAD domain tRNA_anti-codon PF01336.25 gi|33151787|ref|NP_873140.1| - 2.3e-15 56.3 0.3 5e-15 55.2 0.3 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|33151787|ref|NP_873140.1| - 0.00034 20.2 0.0 0.65 9.4 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Amidohydro_1 PF01979.20 gi|33151788|ref|NP_873141.1| - 2.3e-07 30.5 0.0 4.5e-07 29.5 0.0 1.5 1 1 0 1 1 1 1 Amidohydrolase family SBP_bac_11 PF13531.6 gi|33151789|ref|NP_873142.1| - 3.3e-19 69.5 0.0 4.4e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|33151789|ref|NP_873142.1| - 4.6e-16 59.0 0.4 6.6e-16 58.5 0.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|33151789|ref|NP_873142.1| - 1.5e-15 58.0 0.8 2.7e-15 57.2 0.8 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein zf-dskA_traR PF01258.17 gi|33151791|ref|NP_873144.1| - 3.8e-10 39.5 2.7 6.5e-10 38.8 2.7 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger HIP1_clath_bdg PF16515.5 gi|33151791|ref|NP_873144.1| - 0.005 17.4 3.5 0.0074 16.9 3.5 1.3 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Mit_ribos_Mrp51 PF11709.8 gi|33151791|ref|NP_873144.1| - 0.0087 15.7 0.9 0.01 15.5 0.9 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein subunit DZR PF12773.7 gi|33151791|ref|NP_873144.1| - 0.012 15.6 0.2 0.021 14.8 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon FAM165 PF14981.6 gi|33151791|ref|NP_873144.1| - 0.052 13.3 0.1 0.15 11.9 0.0 1.8 2 0 0 2 2 2 0 FAM165 family MIEAP PF16026.5 gi|33151791|ref|NP_873144.1| - 0.055 13.7 0.6 0.072 13.3 0.6 1.1 1 0 0 1 1 1 0 Mitochondria-eating protein AAA_11 PF13086.6 gi|33151791|ref|NP_873144.1| - 0.12 12.1 1.3 0.15 11.8 1.3 1.1 1 0 0 1 1 1 0 AAA domain PolyA_pol PF01743.20 gi|33151792|ref|NP_873145.1| - 3.7e-37 127.6 0.4 1.5e-36 125.6 0.2 2.1 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_arg_C PF12626.7 gi|33151792|ref|NP_873145.1| - 3.3e-36 123.9 2.3 3.3e-36 123.9 2.3 2.1 3 0 0 3 3 3 1 Polymerase A arginine-rich C-terminus PolyA_pol_RNAbd PF12627.7 gi|33151792|ref|NP_873145.1| - 4.5e-18 64.8 0.0 9.6e-18 63.7 0.0 1.6 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HPPK PF01288.20 gi|33151793|ref|NP_873146.1| - 4e-36 123.9 0.1 4.8e-36 123.7 0.1 1.1 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Lipoprotein_19 PF13617.6 gi|33151794|ref|NP_873147.1| - 5.5e-12 45.3 1.8 5.5e-12 45.3 1.8 1.5 2 0 0 2 2 2 1 YnbE-like lipoprotein TrmO_C PF18389.1 gi|33151794|ref|NP_873147.1| - 0.049 13.7 0.1 0.07 13.2 0.1 1.2 1 0 0 1 1 1 0 TrmO C-terminal domain DUF4969 PF16339.5 gi|33151794|ref|NP_873147.1| - 0.07 13.5 0.3 0.094 13.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) DctA-YdbH PF11739.8 gi|33151795|ref|NP_873148.1| - 1.2e-55 188.5 1.4 1.8e-54 184.6 0.6 3.4 4 0 0 4 4 4 1 Dicarboxylate transport Glyoxalase PF00903.25 gi|33151798|ref|NP_873151.1| - 1.5e-22 80.2 0.0 1.7e-22 80.0 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|33151798|ref|NP_873151.1| - 1.7e-05 25.1 0.0 0.00011 22.4 0.0 1.9 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|33151798|ref|NP_873151.1| - 0.008 17.0 0.0 0.016 16.0 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain CppA_N PF14506.6 gi|33151798|ref|NP_873151.1| - 0.012 15.7 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 CppA N-terminal Glyoxalase_2 PF12681.7 gi|33151798|ref|NP_873151.1| - 0.053 13.4 0.0 0.17 11.9 0.0 1.8 1 1 0 1 1 1 0 Glyoxalase-like domain RNase_T PF00929.24 gi|33151799|ref|NP_873152.1| - 2.7e-40 138.6 0.9 3.2e-40 138.4 0.9 1.0 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 gi|33151799|ref|NP_873152.1| - 2.6e-06 27.5 0.1 5.3e-06 26.5 0.1 1.5 1 1 0 1 1 1 1 3' exoribonuclease, RNase T-like DNA_pol_A_exo1 PF01612.20 gi|33151799|ref|NP_873152.1| - 0.037 13.7 0.2 1.2 8.8 0.1 2.3 1 1 0 1 1 1 0 3'-5' exonuclease ketoacyl-synt PF00109.26 gi|33151800|ref|NP_873153.1| - 6.8e-44 150.4 3.9 1.1e-43 149.6 3.9 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|33151800|ref|NP_873153.1| - 1.8e-31 108.6 2.3 2.1e-31 108.4 0.4 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 gi|33151800|ref|NP_873153.1| - 5.5e-05 22.7 3.6 0.001 18.5 0.9 2.2 1 1 1 2 2 2 2 Thiolase, N-terminal domain KAsynt_C_assoc PF16197.5 gi|33151800|ref|NP_873153.1| - 0.0018 18.7 0.0 0.0034 17.8 0.0 1.5 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Adenylate_cycl PF01295.18 gi|33151801|ref|NP_873154.1| - 7e-237 787.9 11.2 9.8e-237 787.4 11.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase, class-I Adenyl_cycl_N PF12633.7 gi|33151801|ref|NP_873154.1| - 5.5e-73 245.1 0.5 1.2e-72 244.1 0.5 1.6 1 0 0 1 1 1 1 Adenylate cyclase NT domain Polbeta PF18765.1 gi|33151801|ref|NP_873154.1| - 0.0046 17.0 0.1 0.015 15.4 0.1 1.9 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase Na_H_Exchanger PF00999.21 gi|33151802|ref|NP_873155.1| - 5.9e-73 245.9 51.8 7.9e-73 245.4 51.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|33151802|ref|NP_873155.1| - 6.6e-22 78.0 0.0 1.9e-21 76.5 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 gi|33151802|ref|NP_873155.1| - 0.0061 17.0 0.0 0.016 15.6 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding ADH_zinc_N PF00107.26 gi|33151802|ref|NP_873155.1| - 0.014 15.3 0.1 0.041 13.9 0.1 1.8 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Shikimate_DH PF01488.20 gi|33151802|ref|NP_873155.1| - 0.017 15.2 0.4 0.071 13.2 0.1 2.2 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|33151802|ref|NP_873155.1| - 0.036 14.3 0.2 0.067 13.5 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CoatB PF10389.9 gi|33151802|ref|NP_873155.1| - 0.047 13.5 1.4 0.22 11.4 1.4 2.2 1 0 0 1 1 1 0 Bacteriophage coat protein B DUF3262 PF11660.8 gi|33151802|ref|NP_873155.1| - 1.6 9.2 8.4 0.52 10.7 1.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3262) CcmF_C PF16327.5 gi|33151803|ref|NP_873156.1| - 2e-72 244.2 19.8 2e-72 244.2 19.8 2.6 2 2 0 2 2 2 1 Cytochrome c-type biogenesis protein CcmF C-terminal Cytochrom_C_asm PF01578.20 gi|33151803|ref|NP_873156.1| - 1.9e-50 171.6 20.5 1.9e-50 171.6 20.5 3.6 3 1 0 3 3 3 1 Cytochrome C assembly protein DUF4579 PF15158.6 gi|33151803|ref|NP_873156.1| - 0.03 14.1 0.4 0.094 12.5 0.4 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) Redoxin PF08534.10 gi|33151804|ref|NP_873157.1| - 4.2e-12 46.0 0.0 5.8e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|33151804|ref|NP_873157.1| - 3.1e-10 40.0 0.0 4.2e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|33151804|ref|NP_873157.1| - 9.7e-06 25.8 0.0 1.8e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|33151804|ref|NP_873157.1| - 0.011 15.7 0.0 0.024 14.6 0.0 1.5 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_9 PF14595.6 gi|33151804|ref|NP_873157.1| - 0.1 12.4 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_2 PF13098.6 gi|33151804|ref|NP_873157.1| - 0.1 13.0 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain Putative_PNPOx PF01243.20 gi|33151805|ref|NP_873158.1| - 1.5e-15 57.2 0.0 2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.6 gi|33151805|ref|NP_873158.1| - 0.0017 18.3 0.0 0.0026 17.7 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Chorismate_bind PF00425.18 gi|33151806|ref|NP_873159.1| - 1.2e-65 221.6 0.0 1.7e-65 221.2 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme PriA_3primeBD PF17764.1 gi|33151808|ref|NP_873161.1| - 1.3e-22 79.5 0.0 3e-22 78.3 0.0 1.7 1 0 0 1 1 1 1 3′ DNA-binding domain (3′BD) PriA_C PF18074.1 gi|33151808|ref|NP_873161.1| - 2.1e-18 66.9 0.1 6.8e-17 62.1 0.0 2.7 2 0 0 2 2 2 1 Primosomal protein N C-terminal domain DEAD PF00270.29 gi|33151808|ref|NP_873161.1| - 3.6e-17 62.7 0.5 8.6e-17 61.5 0.1 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|33151808|ref|NP_873161.1| - 2.8e-14 53.5 0.0 5.6e-14 52.5 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|33151808|ref|NP_873161.1| - 4.2e-13 49.6 0.8 1.9e-06 28.2 0.0 3.1 4 0 0 4 4 3 2 Helicase conserved C-terminal domain PriA_CRR PF18319.1 gi|33151808|ref|NP_873161.1| - 7.7e-07 29.0 9.7 7.7e-07 29.0 9.7 3.3 3 0 0 3 3 3 1 PriA DNA helicase Cys-rich region (CRR) domain AAA_30 PF13604.6 gi|33151808|ref|NP_873161.1| - 0.0066 16.2 0.0 0.039 13.7 0.0 2.3 3 0 0 3 3 3 1 AAA domain TrwB_AAD_bind PF10412.9 gi|33151808|ref|NP_873161.1| - 0.0094 14.9 0.0 0.017 14.1 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain PIF1 PF05970.14 gi|33151808|ref|NP_873161.1| - 0.029 13.6 0.1 0.068 12.3 0.1 1.7 1 0 0 1 1 1 0 PIF1-like helicase T2SSE PF00437.20 gi|33151808|ref|NP_873161.1| - 0.076 12.1 0.0 0.13 11.3 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_19 PF13245.6 gi|33151808|ref|NP_873161.1| - 0.11 12.8 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain FYVE_2 PF02318.16 gi|33151808|ref|NP_873161.1| - 0.83 9.9 5.8 0.78 10.0 3.4 2.1 2 0 0 2 2 2 0 FYVE-type zinc finger DUF2318 PF10080.9 gi|33151808|ref|NP_873161.1| - 5.8 7.1 7.2 18 5.5 7.2 1.8 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Ala_racemase_N PF01168.20 gi|33151809|ref|NP_873162.1| - 1.3e-69 234.2 0.0 1.7e-69 233.8 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 gi|33151809|ref|NP_873162.1| - 1.8e-38 131.2 0.1 2.9e-38 130.5 0.1 1.3 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain AAA_30 PF13604.6 gi|33151811|ref|NP_873164.1| - 4.5e-29 101.6 0.1 1.8e-28 99.6 0.1 1.8 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|33151811|ref|NP_873164.1| - 5.1e-29 101.5 0.3 1.2e-28 100.2 0.3 1.7 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|33151811|ref|NP_873164.1| - 5e-14 51.9 0.0 9.4e-14 51.0 0.0 1.5 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Helicase_RecD PF05127.14 gi|33151811|ref|NP_873164.1| - 4.2e-12 46.3 0.0 1e-11 45.0 0.0 1.6 1 0 0 1 1 1 1 Helicase AAA_11 PF13086.6 gi|33151811|ref|NP_873164.1| - 7.7e-11 42.3 0.2 3.4e-07 30.3 0.1 2.5 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 gi|33151811|ref|NP_873164.1| - 7.7e-10 38.9 1.9 5.2e-05 23.1 0.0 3.4 2 1 1 3 3 3 2 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|33151811|ref|NP_873164.1| - 5.3e-08 32.5 0.0 1.6e-07 30.9 0.0 1.8 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 gi|33151811|ref|NP_873164.1| - 7.3e-07 29.5 0.0 2.7e-06 27.7 0.0 2.0 1 0 0 1 1 1 1 AAA domain UvrD_C PF13361.6 gi|33151811|ref|NP_873164.1| - 1.6e-05 24.4 0.3 4e-05 23.2 0.1 1.5 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain SH3_13 PF18335.1 gi|33151811|ref|NP_873164.1| - 1.7e-05 24.5 1.0 3.3e-05 23.6 0.1 1.9 2 0 0 2 2 2 1 ATP-dependent RecD-like DNA helicase SH3 domain UvrD-helicase PF00580.21 gi|33151811|ref|NP_873164.1| - 4.4e-05 23.1 1.4 4.4e-05 23.1 1.4 3.0 2 2 1 3 3 3 1 UvrD/REP helicase N-terminal domain PIF1 PF05970.14 gi|33151811|ref|NP_873164.1| - 0.00029 20.1 0.0 0.00052 19.3 0.0 1.3 1 0 0 1 1 1 1 PIF1-like helicase NTPase_1 PF03266.15 gi|33151811|ref|NP_873164.1| - 0.0034 17.3 0.5 0.022 14.7 0.4 2.3 2 0 0 2 2 2 1 NTPase T2SSE PF00437.20 gi|33151811|ref|NP_873164.1| - 0.004 16.3 0.1 0.0077 15.3 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein ResIII PF04851.15 gi|33151811|ref|NP_873164.1| - 0.0053 16.8 0.3 0.035 14.1 0.3 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit TrwB_AAD_bind PF10412.9 gi|33151811|ref|NP_873164.1| - 0.0069 15.3 0.1 0.012 14.5 0.1 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 gi|33151811|ref|NP_873164.1| - 0.0082 16.5 0.2 0.026 14.9 0.1 1.9 2 0 0 2 2 1 1 AAA ATPase domain AAA_7 PF12775.7 gi|33151811|ref|NP_873164.1| - 0.018 14.5 0.1 0.035 13.6 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 gi|33151811|ref|NP_873164.1| - 0.022 15.0 0.7 0.05 13.8 0.7 1.5 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 gi|33151811|ref|NP_873164.1| - 0.022 14.5 1.9 0.092 12.5 1.8 1.9 1 1 0 1 1 1 0 DEAD/DEAH box helicase NACHT PF05729.12 gi|33151811|ref|NP_873164.1| - 0.024 14.6 0.0 0.047 13.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|33151811|ref|NP_873164.1| - 0.029 13.6 0.2 0.057 12.7 0.2 1.4 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.29 gi|33151811|ref|NP_873164.1| - 0.036 14.5 0.2 0.092 13.2 0.2 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 gi|33151811|ref|NP_873164.1| - 0.051 13.2 0.6 0.11 12.1 0.6 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|33151811|ref|NP_873164.1| - 0.082 13.0 0.7 0.29 11.2 0.5 2.0 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_5 PF07728.14 gi|33151811|ref|NP_873164.1| - 0.11 12.6 0.6 0.84 9.6 0.2 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PqiA PF04403.13 gi|33151813|ref|NP_873166.1| - 5.7e-80 266.6 41.3 1.3e-42 145.3 16.6 2.0 2 0 0 2 2 2 2 Paraquat-inducible protein A HypA PF01155.19 gi|33151813|ref|NP_873166.1| - 0.00083 19.4 1.2 0.13 12.3 0.0 2.5 3 0 0 3 3 3 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|33151813|ref|NP_873166.1| - 0.0018 18.3 7.2 0.46 10.5 2.1 2.3 2 0 0 2 2 2 2 Double zinc ribbon Tmemb_55A PF09788.9 gi|33151813|ref|NP_873166.1| - 0.0053 15.9 13.3 0.0054 15.8 0.1 2.7 3 0 0 3 3 3 2 Transmembrane protein 55A zinc-ribbons_6 PF07191.12 gi|33151813|ref|NP_873166.1| - 0.06 13.3 8.8 1.6 8.8 0.2 2.9 2 1 0 2 2 2 0 zinc-ribbons IBR PF01485.21 gi|33151813|ref|NP_873166.1| - 0.91 9.8 9.8 0.49 10.7 1.4 2.8 2 1 2 4 4 4 0 IBR domain, a half RING-finger domain TackOD1 PF18551.1 gi|33151813|ref|NP_873166.1| - 1.3 8.7 8.4 8.6 6.0 0.3 2.3 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 Zn-ribbon_8 PF09723.10 gi|33151813|ref|NP_873166.1| - 1.5 9.0 13.6 1.2 9.3 0.7 3.4 2 1 1 3 3 3 0 Zinc ribbon domain DUF2225 PF09986.9 gi|33151813|ref|NP_873166.1| - 4.2 7.0 4.6 23 4.6 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) UPF0547 PF10571.9 gi|33151813|ref|NP_873166.1| - 6.7 6.9 17.3 11 6.2 0.2 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 RNHCP PF12647.7 gi|33151813|ref|NP_873166.1| - 6.8 6.7 6.4 19 5.3 0.2 2.2 2 0 0 2 2 2 0 RNHCP domain THDPS_N_2 PF14805.6 gi|33151814|ref|NP_873167.1| - 4e-25 87.8 0.6 6.5e-25 87.1 0.6 1.4 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep PF00132.24 gi|33151814|ref|NP_873167.1| - 1.3e-14 53.2 13.5 9.3e-08 31.5 2.6 3.5 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|33151814|ref|NP_873167.1| - 2.2e-13 49.7 12.2 2.6e-13 49.4 3.8 3.5 3 1 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase Cas3_C PF18395.1 gi|33151814|ref|NP_873167.1| - 0.053 14.0 0.0 0.12 12.9 0.0 1.6 2 0 0 2 2 2 0 Cas3 C-terminal domain ArsC PF03960.15 gi|33151815|ref|NP_873168.1| - 2.5e-11 43.4 0.0 3.3e-11 43.0 0.0 1.2 1 1 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 gi|33151815|ref|NP_873168.1| - 0.023 14.9 0.0 0.038 14.2 0.0 1.5 1 1 0 1 1 1 0 Glutaredoxin Toprim_Crpt PF13342.6 gi|33151815|ref|NP_873168.1| - 0.029 14.4 0.0 2.4 8.2 0.0 2.2 2 0 0 2 2 2 0 C-terminal repeat of topoisomerase DHquinase_II PF01220.19 gi|33151816|ref|NP_873169.1| - 1.4e-59 199.7 0.0 1.5e-59 199.6 0.0 1.0 1 0 0 1 1 1 1 Dehydroquinase class II Biotin_lipoyl PF00364.22 gi|33151817|ref|NP_873170.1| - 1.8e-23 82.1 1.2 2.3e-23 81.8 0.4 1.6 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|33151817|ref|NP_873170.1| - 0.00059 19.6 1.9 0.24 11.3 0.5 2.4 1 1 1 2 2 2 2 Biotin-lipoyl like RnfC_N PF13375.6 gi|33151817|ref|NP_873170.1| - 0.027 14.4 0.6 0.075 13.0 0.1 1.9 1 1 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Prot_ATP_OB_N PF17758.1 gi|33151817|ref|NP_873170.1| - 0.064 12.9 0.3 0.33 10.6 0.0 2.3 2 1 0 2 2 2 0 Proteasomal ATPase OB N-terminal domain CPSase_L_D2 PF02786.17 gi|33151818|ref|NP_873171.1| - 1.2e-83 279.8 0.1 1.7e-83 279.3 0.1 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|33151818|ref|NP_873171.1| - 1.2e-44 151.3 0.1 1.2e-44 151.3 0.1 2.3 4 0 0 4 4 4 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|33151818|ref|NP_873171.1| - 1.8e-38 131.0 0.0 3.5e-38 130.0 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|33151818|ref|NP_873171.1| - 1.5e-08 34.9 0.0 3.1e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|33151818|ref|NP_873171.1| - 5.1e-08 32.7 0.0 1.5e-07 31.2 0.0 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|33151818|ref|NP_873171.1| - 3.3e-07 30.0 0.0 7e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|33151818|ref|NP_873171.1| - 0.012 15.2 0.0 0.033 13.8 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain GARS_A PF01071.19 gi|33151818|ref|NP_873171.1| - 0.052 13.3 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MobB PF03205.14 gi|33151819|ref|NP_873172.1| - 6.3e-46 155.6 0.0 1e-45 154.9 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTP_transf_3 PF12804.7 gi|33151819|ref|NP_873172.1| - 2.3e-29 102.8 0.0 8.2e-29 101.0 0.0 1.8 2 1 0 2 2 2 1 MobA-like NTP transferase domain MeaB PF03308.16 gi|33151819|ref|NP_873172.1| - 4.3e-05 22.6 0.1 7e-05 21.9 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|33151819|ref|NP_873172.1| - 7.3e-05 22.4 0.0 0.00012 21.7 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|33151819|ref|NP_873172.1| - 0.00019 21.2 0.0 0.00035 20.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33151819|ref|NP_873172.1| - 0.00041 20.8 0.1 0.00089 19.7 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|33151819|ref|NP_873172.1| - 0.00058 19.8 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 NTPase AAA_23 PF13476.6 gi|33151819|ref|NP_873172.1| - 0.0021 18.6 0.2 0.0048 17.4 0.2 1.7 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|33151819|ref|NP_873172.1| - 0.0023 18.4 0.0 0.0043 17.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|33151819|ref|NP_873172.1| - 0.0066 16.2 0.2 0.015 15.0 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain PRK PF00485.18 gi|33151819|ref|NP_873172.1| - 0.0091 15.8 0.0 0.015 15.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|33151819|ref|NP_873172.1| - 0.015 15.8 0.1 0.031 14.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|33151819|ref|NP_873172.1| - 0.025 14.6 0.4 0.076 13.1 0.4 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PIF1 PF05970.14 gi|33151819|ref|NP_873172.1| - 0.032 13.4 0.0 0.054 12.7 0.0 1.4 1 0 0 1 1 1 0 PIF1-like helicase RsgA_GTPase PF03193.16 gi|33151819|ref|NP_873172.1| - 0.04 13.8 0.1 0.093 12.6 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase SRP54 PF00448.22 gi|33151819|ref|NP_873172.1| - 0.046 13.3 0.6 0.081 12.5 0.4 1.6 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|33151819|ref|NP_873172.1| - 0.053 13.8 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain LpxK PF02606.14 gi|33151819|ref|NP_873172.1| - 0.069 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase NACHT PF05729.12 gi|33151819|ref|NP_873172.1| - 0.084 12.8 0.4 0.18 11.7 0.2 1.6 2 0 0 2 2 2 0 NACHT domain DUF2543 PF10820.8 gi|33151819|ref|NP_873172.1| - 0.093 12.9 0.1 0.31 11.2 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) T2SSE PF00437.20 gi|33151819|ref|NP_873172.1| - 0.098 11.7 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 gi|33151819|ref|NP_873172.1| - 0.17 12.0 0.0 0.34 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF1040 PF06288.13 gi|33151820|ref|NP_873173.1| - 8.2e-39 131.9 0.8 9.2e-39 131.7 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) DSBA PF01323.20 gi|33151821|ref|NP_873174.1| - 1.8e-25 89.9 2.9 1.7e-24 86.7 2.9 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|33151821|ref|NP_873174.1| - 3.2e-13 50.2 0.2 4e-13 49.9 0.2 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin PF00085.20 gi|33151821|ref|NP_873174.1| - 2e-05 24.5 0.1 0.025 14.5 0.0 2.4 2 1 0 2 2 2 2 Thioredoxin Thioredoxin_5 PF13743.6 gi|33151821|ref|NP_873174.1| - 0.00048 19.9 0.8 0.00082 19.1 0.2 1.7 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|33151821|ref|NP_873174.1| - 0.11 13.0 0.1 0.2 12.1 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain SPOR PF05036.13 gi|33151822|ref|NP_873175.1| - 2.4e-16 59.9 1.6 6.3e-16 58.5 0.1 2.3 2 0 0 2 2 2 1 Sporulation related domain DUF2749 PF10907.8 gi|33151822|ref|NP_873175.1| - 0.02 15.0 0.0 0.07 13.3 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) Malt_amylase_C PF16657.5 gi|33151822|ref|NP_873175.1| - 0.083 13.0 0.1 0.23 11.6 0.1 1.8 1 0 0 1 1 1 0 Maltogenic Amylase, C-terminal domain YjbH PF06082.11 gi|33151822|ref|NP_873175.1| - 3.9 6.2 9.2 4.4 6.0 9.2 1.1 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH DUF4045 PF13254.6 gi|33151822|ref|NP_873175.1| - 4.4 6.8 19.3 5.4 6.6 19.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) WTX PF09422.10 gi|33151822|ref|NP_873175.1| - 5 6.1 13.6 6.6 5.7 13.6 1.1 1 0 0 1 1 1 0 WTX protein Asp-B-Hydro_N PF05279.11 gi|33151822|ref|NP_873175.1| - 7.8 6.5 17.0 10 6.1 17.0 1.2 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region CCDC53 PF10152.9 gi|33151822|ref|NP_873175.1| - 8.2 6.8 16.2 14 6.1 16.2 1.3 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex SAM_MT PF04445.13 gi|33151823|ref|NP_873176.1| - 1.5e-108 361.6 0.3 1.7e-108 361.4 0.3 1.0 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase Pyr_redox PF00070.27 gi|33151823|ref|NP_873176.1| - 0.012 16.1 0.1 0.075 13.6 0.1 2.2 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Cons_hypoth95 PF03602.15 gi|33151823|ref|NP_873176.1| - 0.013 15.2 0.1 0.029 14.0 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 Microcephalin PF12258.8 gi|33151823|ref|NP_873176.1| - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Microcephalin protein VanY PF02557.17 gi|33151824|ref|NP_873177.1| - 1.6e-38 131.5 0.3 2.1e-38 131.1 0.3 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase DUF4601 PF15373.6 gi|33151824|ref|NP_873177.1| - 0.019 14.0 0.0 0.024 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4601) Peptidase_M20 PF01546.28 gi|33151825|ref|NP_873178.1| - 2.5e-41 141.7 0.0 3e-41 141.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|33151825|ref|NP_873178.1| - 7.7e-21 74.1 0.0 1.2e-20 73.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain ArsC PF03960.15 gi|33151826|ref|NP_873179.1| - 2.2e-18 66.0 0.1 2.4e-18 65.9 0.1 1.1 1 0 0 1 1 1 1 ArsC family Pterin_bind PF00809.22 gi|33151827|ref|NP_873180.1| - 4.2e-85 285.3 0.0 4.8e-85 285.1 0.0 1.0 1 0 0 1 1 1 1 Pterin binding enzyme PseudoU_synth_2 PF00849.22 gi|33151828|ref|NP_873181.1| - 5.8e-28 98.0 0.0 9.3e-28 97.3 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 gi|33151828|ref|NP_873181.1| - 1.8e-10 40.4 0.9 3.2e-10 39.5 0.9 1.5 1 0 0 1 1 1 1 S4 domain TGS PF02824.21 gi|33151828|ref|NP_873181.1| - 0.13 12.3 0.0 0.41 10.7 0.0 1.9 1 0 0 1 1 1 0 TGS domain Plug PF07715.15 gi|33151829|ref|NP_873182.1| - 6.5e-12 46.0 1.4 5.8e-11 42.9 2.0 2.4 2 1 0 2 2 2 1 TonB-dependent Receptor Plug Domain MS_channel PF00924.18 gi|33151830|ref|NP_873183.1| - 2.2e-53 180.9 2.5 3.1e-53 180.4 2.5 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|33151830|ref|NP_873183.1| - 3.2e-06 27.0 0.4 3.2e-06 27.0 0.4 2.6 3 0 0 3 3 3 1 Conserved TM helix DUF2208 PF09973.9 gi|33151830|ref|NP_873183.1| - 0.022 14.4 1.2 0.04 13.5 1.2 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) RseC_MucC PF04246.12 gi|33151830|ref|NP_873183.1| - 0.57 10.1 8.2 6.6 6.7 0.1 2.7 2 1 1 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Trp_Tyr_perm PF03222.13 gi|33151831|ref|NP_873184.1| - 2.6e-124 415.3 28.8 3.2e-124 415.0 28.8 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 gi|33151831|ref|NP_873184.1| - 1.6e-08 33.7 18.6 1.6e-08 33.7 18.6 2.1 2 0 0 2 2 2 1 Transmembrane amino acid transporter protein PS_Dcarbxylase PF02666.15 gi|33151832|ref|NP_873185.1| - 1.4e-58 197.8 0.0 1.7e-58 197.5 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase HHH_3 PF12836.7 gi|33151833|ref|NP_873186.1| - 3e-22 78.6 0.4 4.4e-22 78.1 0.4 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|33151833|ref|NP_873186.1| - 4.4e-10 38.9 0.0 5.1e-06 26.1 0.1 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|33151833|ref|NP_873186.1| - 7.5e-05 23.3 0.3 0.13 12.9 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix domain T2SSK PF03934.13 gi|33151833|ref|NP_873186.1| - 0.00083 18.8 0.0 0.0012 18.4 0.0 1.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K HHH_6 PF14579.6 gi|33151833|ref|NP_873186.1| - 0.0015 18.7 0.0 0.0032 17.7 0.0 1.5 1 1 0 1 1 1 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|33151833|ref|NP_873186.1| - 0.01 15.9 0.4 0.076 13.1 0.1 2.1 1 1 1 2 2 2 0 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|33151833|ref|NP_873186.1| - 0.047 14.1 0.2 11 6.4 0.0 2.5 2 0 0 2 2 2 0 Helix-hairpin-helix domain OapA PF04225.12 gi|33151834|ref|NP_873187.1| - 8.8e-27 93.0 0.3 3.5e-26 91.1 0.3 2.1 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain GTP_EFTU_D4 PF14578.6 gi|33151834|ref|NP_873187.1| - 0.059 13.3 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 4 FdhE PF04216.12 gi|33151834|ref|NP_873187.1| - 1.4 8.7 6.1 3.6 7.4 6.2 1.7 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation MliC PF09864.9 gi|33151835|ref|NP_873188.1| - 1.4e-09 37.7 0.9 2.9e-09 36.7 0.9 1.5 1 1 0 1 1 1 1 Membrane-bound lysozyme-inhibitor of c-type lysozyme DUF2194 PF09960.9 gi|33151835|ref|NP_873188.1| - 0.04 12.3 0.8 0.045 12.1 0.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2194) Glyco_transf_9 PF01075.17 gi|33151836|ref|NP_873189.1| - 1.2e-74 250.8 0.0 1.4e-74 250.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Ribosom_S12_S23 PF00164.25 gi|33151838|ref|NP_873191.1| - 1.4e-41 140.6 1.5 1.7e-41 140.4 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S12 PF17487.2 gi|33151838|ref|NP_873191.1| - 0.047 14.4 0.0 0.078 13.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S12 Ribosomal_S7 PF00177.21 gi|33151839|ref|NP_873192.1| - 1.4e-66 222.8 2.2 1.5e-66 222.6 2.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e ArgJ PF01960.18 gi|33151839|ref|NP_873192.1| - 0.0077 15.0 0.0 0.01 14.6 0.0 1.1 1 0 0 1 1 1 1 ArgJ family DUF2267 PF10025.9 gi|33151839|ref|NP_873192.1| - 0.051 13.8 0.5 0.069 13.4 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) GTP_EFTU PF00009.27 gi|33151840|ref|NP_873193.1| - 3.4e-68 229.0 0.1 5.1e-68 228.5 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|33151840|ref|NP_873193.1| - 3.2e-47 159.3 0.0 6.7e-47 158.2 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|33151840|ref|NP_873193.1| - 1.1e-35 121.5 0.1 2.4e-35 120.5 0.1 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|33151840|ref|NP_873193.1| - 2.1e-27 95.0 0.0 6.2e-27 93.5 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|33151840|ref|NP_873193.1| - 6e-17 61.8 0.2 1.9e-16 60.2 0.2 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 gi|33151840|ref|NP_873193.1| - 3.8e-06 26.8 0.0 8.9e-06 25.6 0.0 1.6 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Peripla_BP_6 PF13458.6 gi|33151840|ref|NP_873193.1| - 0.019 14.7 0.2 0.039 13.6 0.2 1.5 1 0 0 1 1 1 0 Periplasmic binding protein AvrPtoB_bdg PF16847.5 gi|33151840|ref|NP_873193.1| - 0.11 13.0 0.0 0.7 10.4 0.0 2.2 2 0 0 2 2 2 0 Avirulence AvrPtoB, BAK1-binding domain GTP_EFTU PF00009.27 gi|33151841|ref|NP_873194.1| - 1.6e-58 197.5 0.0 2.4e-58 196.9 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|33151841|ref|NP_873194.1| - 5.3e-34 116.9 0.0 1.1e-33 115.9 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|33151841|ref|NP_873194.1| - 3e-17 62.8 6.3 7e-17 61.6 6.3 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|33151841|ref|NP_873194.1| - 2.2e-05 24.5 0.0 4.5e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 gi|33151841|ref|NP_873194.1| - 0.039 13.5 0.2 0.09 12.4 0.0 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SATase_N PF06426.14 gi|33151842|ref|NP_873195.1| - 2.5e-40 137.1 0.5 3.8e-40 136.5 0.5 1.3 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep PF00132.24 gi|33151842|ref|NP_873195.1| - 1.1e-12 47.1 4.6 5.1e-10 38.7 0.3 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|33151842|ref|NP_873195.1| - 0.011 15.5 0.3 0.011 15.5 0.3 2.3 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|33151842|ref|NP_873195.1| - 0.012 15.8 1.3 0.019 15.2 1.3 1.2 1 0 0 1 1 1 0 Polymer-forming cytoskeletal NAD_Gly3P_dh_C PF07479.14 gi|33151843|ref|NP_873196.1| - 1.3e-52 177.9 1.5 2.4e-52 177.0 1.5 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 gi|33151843|ref|NP_873196.1| - 3e-46 157.2 0.0 4.4e-46 156.7 0.0 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|33151843|ref|NP_873196.1| - 1.1e-08 34.9 0.1 2e-08 34.0 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|33151843|ref|NP_873196.1| - 1.3e-05 25.7 0.0 3.9e-05 24.1 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|33151843|ref|NP_873196.1| - 0.0011 19.1 0.2 0.0027 17.9 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase GIDA PF01134.22 gi|33151843|ref|NP_873196.1| - 0.0017 17.5 0.3 0.0038 16.3 0.0 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|33151843|ref|NP_873196.1| - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 gi|33151843|ref|NP_873196.1| - 0.03 13.9 0.2 0.45 10.1 0.2 2.3 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sacchrp_dh_NADP PF03435.18 gi|33151843|ref|NP_873196.1| - 0.13 12.5 0.0 0.35 11.1 0.0 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain SecB PF02556.14 gi|33151844|ref|NP_873197.1| - 2.1e-50 170.3 0.0 2.9e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB Rhodanese PF00581.20 gi|33151845|ref|NP_873198.1| - 4.3e-14 52.9 0.0 6e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain CLAG PF03805.13 gi|33151845|ref|NP_873198.1| - 0.1 10.2 0.0 0.12 9.9 0.0 1.1 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein MRAP PF15183.6 gi|33151845|ref|NP_873198.1| - 0.17 11.8 0.6 0.29 11.1 0.6 1.3 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Trigger_N PF05697.13 gi|33151846|ref|NP_873199.1| - 2.3e-40 138.2 1.2 2.3e-40 138.2 1.2 3.4 3 1 1 4 4 4 1 Bacterial trigger factor protein (TF) Trigger_C PF05698.14 gi|33151846|ref|NP_873199.1| - 1.7e-35 122.5 21.0 3.8e-35 121.3 13.0 2.6 3 0 0 3 3 3 2 Bacterial trigger factor protein (TF) C-terminus FKBP_C PF00254.28 gi|33151846|ref|NP_873199.1| - 6e-15 55.3 0.2 2.4e-14 53.4 0.2 2.0 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF3811 PF11656.8 gi|33151846|ref|NP_873199.1| - 0.038 14.4 4.9 0.27 11.6 0.3 2.9 2 0 0 2 2 2 0 YjbD family (DUF3811) DUF5344 PF17279.2 gi|33151846|ref|NP_873199.1| - 0.048 14.2 5.2 0.92 10.1 0.3 3.3 3 1 0 3 3 3 0 Family of unknown function (DUF5344) PG_binding_4 PF12229.8 gi|33151846|ref|NP_873199.1| - 0.14 12.5 2.9 0.37 11.1 0.1 3.0 3 0 0 3 3 3 0 Putative peptidoglycan binding domain YcgL PF05166.13 gi|33151846|ref|NP_873199.1| - 0.17 12.2 0.3 0.7 10.3 0.3 2.0 1 0 0 1 1 1 0 YcgL domain Arabinose_Isome PF02610.15 gi|33151846|ref|NP_873199.1| - 0.44 9.7 6.8 0.29 10.3 4.4 1.9 2 0 0 2 2 2 0 L-arabinose isomerase ATPgrasp_N PF18130.1 gi|33151846|ref|NP_873199.1| - 1.1 9.8 4.5 0.81 10.3 0.1 3.0 4 0 0 4 4 4 0 ATP-grasp N-terminal domain LysM PF01476.20 gi|33151848|ref|NP_873201.1| - 1.1e-11 44.5 0.7 3.9e-11 42.8 0.2 2.0 2 0 0 2 2 2 1 LysM domain BON PF04972.17 gi|33151848|ref|NP_873201.1| - 2.3e-11 43.9 4.8 3.3e-11 43.3 4.8 1.3 1 0 0 1 1 1 1 BON domain Phage_tail_X PF05489.12 gi|33151848|ref|NP_873201.1| - 0.032 13.9 0.0 0.89 9.3 0.0 2.4 2 1 0 2 2 2 0 Phage Tail Protein X DNA_pol3_chi PF04364.13 gi|33151849|ref|NP_873202.1| - 1.9e-41 141.4 0.5 2.2e-41 141.2 0.5 1.0 1 0 0 1 1 1 1 DNA polymerase III chi subunit, HolC APP_E2 PF12925.7 gi|33151849|ref|NP_873202.1| - 0.069 12.9 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 E2 domain of amyloid precursor protein ID PF18543.1 gi|33151850|ref|NP_873203.1| - 0.02 14.9 1.4 0.049 13.6 0.2 2.4 2 0 0 2 2 2 0 Intracellular delivery domain CooT PF10133.9 gi|33151850|ref|NP_873203.1| - 0.052 13.8 0.6 0.21 11.9 0.5 2.1 2 0 0 2 2 2 0 CO dehydrogenase accessory protein CooT CSD PF00313.22 gi|33151850|ref|NP_873203.1| - 0.058 13.3 0.0 0.21 11.5 0.0 2.0 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain Wax2_C PF12076.8 gi|33151850|ref|NP_873203.1| - 0.11 12.3 0.4 0.18 11.5 0.4 1.4 1 0 0 1 1 1 0 WAX2 C-terminal domain tRNA-synt_1 PF00133.22 gi|33151851|ref|NP_873204.1| - 4.9e-230 764.9 0.0 6.1e-229 761.3 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|33151851|ref|NP_873204.1| - 6.5e-45 152.8 0.3 1.5e-44 151.6 0.3 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|33151851|ref|NP_873204.1| - 1.3e-17 63.7 0.5 2.7e-07 29.7 0.0 4.8 4 1 0 4 4 4 3 tRNA synthetases class I (M) Val_tRNA-synt_C PF10458.9 gi|33151851|ref|NP_873204.1| - 2.8e-17 62.7 3.7 5.9e-17 61.7 3.7 1.6 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 gi|33151851|ref|NP_873204.1| - 2.4e-10 40.2 0.1 2.4e-08 33.7 0.0 2.4 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 ABC_tran_CTD PF16326.5 gi|33151851|ref|NP_873204.1| - 0.0047 17.2 3.0 0.017 15.4 3.0 2.0 1 0 0 1 1 1 1 ABC transporter C-terminal domain tRNA-synt_1f PF01921.18 gi|33151851|ref|NP_873204.1| - 0.084 11.8 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (K) ADIP PF11559.8 gi|33151851|ref|NP_873204.1| - 0.16 12.1 0.6 0.39 10.8 0.6 1.6 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding tRNA-synt_1b PF00579.25 gi|33151851|ref|NP_873204.1| - 2.4 7.4 4.4 1.1 8.5 0.0 2.4 3 0 0 3 3 3 0 tRNA synthetases class I (W and Y) SSF PF00474.17 gi|33151852|ref|NP_873205.1| - 1.7e-121 406.0 31.6 2.1e-121 405.6 31.6 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family DUF997 PF06196.12 gi|33151853|ref|NP_873206.1| - 1.8e-26 92.0 4.3 2e-26 91.8 4.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF997) MetJ PF01340.20 gi|33151854|ref|NP_873207.1| - 6.3e-54 180.0 0.0 7.1e-54 179.8 0.0 1.0 1 0 0 1 1 1 1 Met Apo-repressor, MetJ AphA_like PF14557.6 gi|33151854|ref|NP_873207.1| - 0.043 13.5 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator MlaA PF04333.13 gi|33151855|ref|NP_873208.1| - 2.5e-65 219.9 0.0 2.9e-65 219.6 0.0 1.0 1 0 0 1 1 1 1 MlaA lipoprotein SpecificRecomb PF10136.9 gi|33151856|ref|NP_873209.1| - 1.9e-222 740.1 1.3 2.2e-222 739.9 1.3 1.0 1 0 0 1 1 1 1 Site-specific recombinase SIMPL PF04402.14 gi|33151857|ref|NP_873210.1| - 2.9e-16 60.5 1.2 3.5e-16 60.3 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) Raco_middle PF17651.1 gi|33151857|ref|NP_873210.1| - 0.06 13.0 0.1 0.27 10.9 0.1 1.9 2 0 0 2 2 2 0 RACo middle region TrmO PF01980.16 gi|33151859|ref|NP_873212.1| - 1e-44 151.6 0.0 1.4e-44 151.1 0.0 1.2 1 0 0 1 1 1 1 tRNA-methyltransferase O TrmO_C PF18389.1 gi|33151859|ref|NP_873212.1| - 1.6e-19 69.8 0.0 2.6e-19 69.1 0.0 1.3 1 0 0 1 1 1 1 TrmO C-terminal domain UbiA PF01040.18 gi|33151860|ref|NP_873213.1| - 8.3e-40 136.7 16.4 1e-39 136.4 16.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Viral_Beta_CD PF04530.12 gi|33151860|ref|NP_873213.1| - 0.1 12.9 0.2 0.1 12.9 0.2 2.6 2 1 0 2 2 2 0 Viral Beta C/D like family Fe-S_biosyn PF01521.20 gi|33151861|ref|NP_873214.1| - 1e-20 73.9 0.0 1.2e-20 73.8 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis CTP_transf_3 PF02348.19 gi|33151862|ref|NP_873215.1| - 2.8e-19 69.9 0.1 4e-19 69.4 0.1 1.3 1 1 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 gi|33151862|ref|NP_873215.1| - 0.0001 22.7 0.0 0.00014 22.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain PyocinActivator PF11112.8 gi|33151862|ref|NP_873215.1| - 0.066 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Pyocin activator protein PrtN Glyco_transf_52 PF07922.11 gi|33151863|ref|NP_873216.1| - 3.1e-76 256.2 6.5 3.6e-76 256.0 6.5 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 52 PM0188 PF11477.8 gi|33151863|ref|NP_873216.1| - 0.0012 18.1 0.0 0.0022 17.3 0.0 1.3 1 0 0 1 1 1 1 Sialyltransferase PMO188 Ub-RnfH PF03658.14 gi|33151863|ref|NP_873216.1| - 0.11 12.9 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 RnfH family Ubiquitin GDP_Man_Dehyd PF16363.5 gi|33151864|ref|NP_873217.1| - 1.1e-91 307.7 0.0 1.3e-91 307.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|33151864|ref|NP_873217.1| - 2.9e-66 223.4 0.0 3.6e-66 223.1 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|33151864|ref|NP_873217.1| - 2.3e-14 53.2 0.0 3.8e-14 52.5 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|33151864|ref|NP_873217.1| - 3.9e-13 49.2 0.0 1.3e-12 47.4 0.0 1.8 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|33151864|ref|NP_873217.1| - 2.2e-11 43.5 0.0 2.1e-08 33.7 0.0 2.3 2 0 0 2 2 2 2 Male sterility protein 3Beta_HSD PF01073.19 gi|33151864|ref|NP_873217.1| - 2.6e-10 39.8 0.0 3.8e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Sacchrp_dh_NADP PF03435.18 gi|33151864|ref|NP_873217.1| - 0.016 15.4 0.0 0.03 14.6 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain adh_short PF00106.25 gi|33151864|ref|NP_873217.1| - 0.018 14.5 0.1 1.9 7.9 0.1 2.4 2 0 0 2 2 2 0 short chain dehydrogenase Gp_dh_N PF00044.24 gi|33151864|ref|NP_873217.1| - 0.024 15.0 1.3 0.51 10.7 0.1 2.6 2 1 1 3 3 3 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KR PF08659.10 gi|33151864|ref|NP_873217.1| - 0.051 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 KR domain NTP_transferase PF00483.23 gi|33151865|ref|NP_873218.1| - 3.4e-70 236.5 0.0 4.1e-70 236.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|33151865|ref|NP_873218.1| - 7.8e-10 39.3 0.0 1.2e-09 38.8 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|33151865|ref|NP_873218.1| - 0.0016 18.2 0.0 0.0023 17.7 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF3234 PF11572.8 gi|33151865|ref|NP_873218.1| - 0.061 13.5 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3234) Ribosomal_S21 PF01165.20 gi|33151866|ref|NP_873219.1| - 5.1e-20 70.9 4.5 5.1e-20 70.9 4.5 1.6 1 1 1 2 2 2 2 Ribosomal protein S21 zf-CHC2 PF01807.20 gi|33151867|ref|NP_873220.1| - 7.2e-41 138.0 0.0 1.6e-40 136.9 0.0 1.6 1 0 0 1 1 1 1 CHC2 zinc finger Toprim_N PF08275.11 gi|33151867|ref|NP_873220.1| - 5.9e-39 133.0 0.0 1.1e-38 132.2 0.0 1.4 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain DnaG_DnaB_bind PF08278.11 gi|33151867|ref|NP_873220.1| - 1.8e-37 128.7 1.9 1.8e-37 128.7 1.9 2.6 3 0 0 3 3 3 1 DNA primase DnaG DnaB-binding Toprim_2 PF13155.6 gi|33151867|ref|NP_873220.1| - 8.2e-15 55.0 0.0 2e-14 53.7 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim_4 PF13662.6 gi|33151867|ref|NP_873220.1| - 6.1e-14 52.3 0.0 1.2e-13 51.3 0.0 1.5 1 0 0 1 1 1 1 Toprim domain DnaB_bind PF10410.9 gi|33151867|ref|NP_873220.1| - 1.1e-13 51.1 0.0 3.1e-13 49.7 0.0 1.8 1 0 0 1 1 1 1 DnaB-helicase binding domain of primase Toprim PF01751.22 gi|33151867|ref|NP_873220.1| - 8.7e-11 42.0 0.0 2.6e-10 40.4 0.0 1.8 2 0 0 2 2 2 1 Toprim domain Toprim_3 PF13362.6 gi|33151867|ref|NP_873220.1| - 3.2e-08 33.8 0.0 6.1e-08 32.9 0.0 1.5 1 0 0 1 1 1 1 Toprim domain DUF3991 PF13154.6 gi|33151867|ref|NP_873220.1| - 0.045 14.1 0.0 12 6.4 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3991) Sigma70_ner PF04546.13 gi|33151868|ref|NP_873221.1| - 1.4e-60 204.7 11.8 1.4e-60 204.7 11.8 2.3 3 0 0 3 3 3 1 Sigma-70, non-essential region Sigma70_r3 PF04539.16 gi|33151868|ref|NP_873221.1| - 2.4e-28 98.1 0.3 2.4e-28 98.1 0.3 3.7 3 1 0 3 3 3 1 Sigma-70 region 3 Sigma70_r1_1 PF03979.14 gi|33151868|ref|NP_873221.1| - 1e-24 86.4 6.8 1e-24 86.4 6.8 3.6 3 0 0 3 3 3 1 Sigma-70 factor, region 1.1 Sigma70_r2 PF04542.14 gi|33151868|ref|NP_873221.1| - 5.3e-22 77.4 0.3 1.8e-21 75.7 0.3 2.0 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|33151868|ref|NP_873221.1| - 1.5e-21 75.6 7.6 3.1e-19 68.2 0.6 2.9 3 0 0 3 3 3 2 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 gi|33151868|ref|NP_873221.1| - 1.2e-12 47.6 0.4 1.2e-12 47.6 0.4 2.8 3 0 0 3 3 3 1 Sigma-70 factor, region 1.2 HTH_25 PF13413.6 gi|33151868|ref|NP_873221.1| - 0.048 13.5 2.1 38 4.2 0.0 4.5 5 0 0 5 5 5 0 Helix-turn-helix domain TMPIT PF07851.13 gi|33151868|ref|NP_873221.1| - 0.058 12.6 7.7 12 5.0 3.9 3.2 2 1 1 3 3 3 0 TMPIT-like protein HTH_31 PF13560.6 gi|33151868|ref|NP_873221.1| - 0.065 13.6 0.0 20 5.6 0.0 3.1 2 0 0 2 2 2 0 Helix-turn-helix domain Mg_chelatase_C PF13335.6 gi|33151868|ref|NP_873221.1| - 3.7 8.3 6.5 5.5 7.7 0.7 3.6 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI C-terminal YL1 PF05764.13 gi|33151868|ref|NP_873221.1| - 4.5 7.3 12.1 13 5.8 11.4 2.0 1 1 0 1 1 1 0 YL1 nuclear protein tRNA-synt_1b PF00579.25 gi|33151869|ref|NP_873222.1| - 5.8e-84 281.9 0.0 7.5e-84 281.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 gi|33151869|ref|NP_873222.1| - 9.1e-06 25.3 0.0 1.6e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 S4 domain TyrRSs_C PF16714.5 gi|33151869|ref|NP_873222.1| - 0.0049 16.7 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Tyrosyl-tRNA synthetase C-terminal domain S4_2 PF13275.6 gi|33151869|ref|NP_873222.1| - 0.093 12.6 0.1 0.2 11.5 0.1 1.5 1 0 0 1 1 1 0 S4 domain HTH_50 PF18024.1 gi|33151869|ref|NP_873222.1| - 0.14 11.8 0.0 0.44 10.2 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain RNB PF00773.19 gi|33151871|ref|NP_873224.1| - 3.4e-105 352.0 0.0 5.4e-105 351.3 0.0 1.3 1 0 0 1 1 1 1 RNB domain OB_RNB PF08206.11 gi|33151871|ref|NP_873224.1| - 7.7e-28 96.0 0.4 1.1e-23 82.7 0.2 2.8 2 0 0 2 2 2 2 Ribonuclease B OB domain CSD2 PF17876.1 gi|33151871|ref|NP_873224.1| - 1.5e-26 92.3 0.0 5.6e-23 80.9 0.0 2.7 2 0 0 2 2 2 2 Cold shock domain S1 PF00575.23 gi|33151871|ref|NP_873224.1| - 1.9e-14 53.7 0.2 2e-12 47.3 0.1 2.8 2 0 0 2 2 2 1 S1 RNA binding domain HTH_12 PF08461.10 gi|33151871|ref|NP_873224.1| - 6.9e-10 38.7 0.2 1.7e-09 37.5 0.2 1.7 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain OB_Dis3 PF17849.1 gi|33151871|ref|NP_873224.1| - 0.0032 17.4 0.0 0.0076 16.3 0.0 1.7 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) AhpC-TSA PF00578.21 gi|33151872|ref|NP_873225.1| - 6e-11 42.3 0.1 8.3e-11 41.9 0.1 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin PF00085.20 gi|33151872|ref|NP_873225.1| - 2e-09 37.4 0.1 0.00024 21.0 0.1 2.2 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 gi|33151872|ref|NP_873225.1| - 3.2e-07 30.8 0.0 5.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|33151872|ref|NP_873225.1| - 5e-06 26.7 0.0 8.5e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 gi|33151872|ref|NP_873225.1| - 1.2e-05 25.0 0.0 1.7e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Redoxin TraF PF13728.6 gi|33151872|ref|NP_873225.1| - 0.00045 20.1 0.1 0.0015 18.4 0.1 1.8 1 1 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 gi|33151872|ref|NP_873225.1| - 0.0086 16.2 0.4 0.035 14.3 0.4 2.1 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|33151872|ref|NP_873225.1| - 0.03 14.1 0.3 0.074 12.8 0.2 1.7 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_3 PF13192.6 gi|33151872|ref|NP_873225.1| - 0.049 13.7 0.0 0.27 11.3 0.0 1.9 2 0 0 2 2 2 0 Thioredoxin domain TetR_N PF00440.23 gi|33151873|ref|NP_873226.1| - 2.7e-10 39.9 0.1 5.6e-10 38.9 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_IclR PF09339.10 gi|33151873|ref|NP_873226.1| - 0.012 15.4 0.6 0.076 12.8 0.0 2.6 4 0 0 4 4 4 0 IclR helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|33151873|ref|NP_873226.1| - 0.055 13.6 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase DSBA PF01323.20 gi|33151873|ref|NP_873226.1| - 0.12 12.1 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 DSBA-like thioredoxin domain LysR_substrate PF03466.20 gi|33151874|ref|NP_873227.1| - 8.3e-42 142.9 0.0 1.1e-41 142.5 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|33151874|ref|NP_873227.1| - 1.2e-19 70.0 0.1 2.7e-19 68.8 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF3809 PF12723.7 gi|33151874|ref|NP_873227.1| - 0.054 13.8 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3809) Redoxin PF08534.10 gi|33151875|ref|NP_873228.1| - 9.5e-33 113.0 0.1 4.4e-32 110.8 0.0 1.9 2 0 0 2 2 2 1 Redoxin Glutaredoxin PF00462.24 gi|33151875|ref|NP_873228.1| - 3.4e-16 59.2 0.5 1.4e-15 57.3 0.0 2.2 3 0 0 3 3 3 1 Glutaredoxin AhpC-TSA PF00578.21 gi|33151875|ref|NP_873228.1| - 1e-11 44.8 0.0 2.7e-11 43.5 0.0 1.7 2 0 0 2 2 2 1 AhpC/TSA family GST_N_3 PF13417.6 gi|33151875|ref|NP_873228.1| - 6e-07 29.8 0.0 1.2e-06 28.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|33151875|ref|NP_873228.1| - 0.009 16.4 0.0 0.018 15.4 0.0 1.6 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 gi|33151875|ref|NP_873228.1| - 0.042 14.3 0.0 0.11 12.9 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin-like domain GST_N_2 PF13409.6 gi|33151875|ref|NP_873228.1| - 0.098 13.0 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain FBPase PF00316.20 gi|33151876|ref|NP_873229.1| - 4.1e-76 254.7 0.0 5.2e-76 254.3 0.0 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Inositol_P PF00459.25 gi|33151876|ref|NP_873229.1| - 0.036 13.6 0.0 0.059 12.9 0.0 1.2 1 0 0 1 1 1 0 Inositol monophosphatase family Mur_ligase_M PF08245.12 gi|33151877|ref|NP_873230.1| - 5.9e-21 75.3 0.1 9.4e-21 74.7 0.1 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase PF01225.25 gi|33151877|ref|NP_873230.1| - 1.3e-17 63.9 0.0 8.7e-17 61.2 0.0 2.2 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_C PF02875.21 gi|33151877|ref|NP_873230.1| - 2.4e-12 46.9 1.1 6.4e-12 45.6 0.1 2.1 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain polyprenyl_synt PF00348.17 gi|33151879|ref|NP_873232.1| - 6e-74 248.3 0.2 8.2e-74 247.9 0.2 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase DUF1772 PF08592.11 gi|33151879|ref|NP_873232.1| - 0.035 14.4 0.1 0.093 13.0 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1772) Ribosomal_L31e PF01198.19 gi|33151879|ref|NP_873232.1| - 0.047 13.9 0.3 0.81 10.0 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L31e QueH PF02677.14 gi|33151880|ref|NP_873233.1| - 5.5e-61 205.7 1.4 6.9e-61 205.4 1.4 1.1 1 0 0 1 1 1 1 Epoxyqueuosine reductase QueH Arginosuc_synth PF00764.19 gi|33151880|ref|NP_873233.1| - 0.027 13.8 0.0 0.04 13.2 0.0 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase OprD PF03573.13 gi|33151880|ref|NP_873233.1| - 0.15 11.1 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 outer membrane porin, OprD family Acyl_transf_1 PF00698.21 gi|33151881|ref|NP_873234.1| - 7.8e-38 130.7 3.7 9.2e-38 130.5 3.7 1.0 1 0 0 1 1 1 1 Acyl transferase domain adh_short PF00106.25 gi|33151882|ref|NP_873235.1| - 1.2e-59 201.1 2.5 1.4e-59 200.9 2.5 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|33151882|ref|NP_873235.1| - 5.2e-57 193.1 2.4 5.9e-57 192.9 2.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|33151882|ref|NP_873235.1| - 1.2e-18 67.7 0.5 1.7e-18 67.2 0.5 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|33151882|ref|NP_873235.1| - 0.00038 20.0 0.1 0.00063 19.3 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|33151882|ref|NP_873235.1| - 0.0017 18.2 1.4 0.0024 17.8 1.4 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 gi|33151882|ref|NP_873235.1| - 0.0026 18.0 0.3 0.006 16.8 0.3 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ADH_zinc_N PF00107.26 gi|33151882|ref|NP_873235.1| - 0.018 15.0 2.4 0.83 9.6 0.5 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Branch_AA_trans PF05525.13 gi|33151883|ref|NP_873236.1| - 7e-135 450.2 44.2 8e-135 450.0 44.2 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein Fapy_DNA_glyco PF01149.24 gi|33151884|ref|NP_873237.1| - 5.2e-29 101.2 0.0 1.1e-28 100.2 0.0 1.5 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain H2TH PF06831.14 gi|33151884|ref|NP_873237.1| - 6.5e-28 96.6 0.0 9.9e-28 96.0 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 gi|33151884|ref|NP_873237.1| - 8.5e-09 35.1 1.5 1.6e-08 34.2 1.5 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS FbpA PF05833.11 gi|33151884|ref|NP_873237.1| - 0.012 14.4 0.0 0.015 14.0 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) DUF4870 PF09685.10 gi|33151885|ref|NP_873238.1| - 0.014 15.5 6.3 0.02 15.0 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) DUF2207 PF09972.9 gi|33151885|ref|NP_873238.1| - 0.4 9.4 5.1 0.51 9.1 5.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) QueT PF06177.11 gi|33151885|ref|NP_873238.1| - 0.7 10.3 10.5 1.1 9.6 10.5 1.3 1 0 0 1 1 1 0 QueT transporter DUF1418 PF07214.12 gi|33151885|ref|NP_873238.1| - 1.4 8.9 3.1 1.5 8.7 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF3592 PF12158.8 gi|33151885|ref|NP_873238.1| - 9 6.3 8.0 14 5.7 3.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3592) TatC PF00902.18 gi|33151886|ref|NP_873239.1| - 2.9e-67 226.5 20.1 3.5e-67 226.2 20.1 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) MttA_Hcf106 PF02416.16 gi|33151887|ref|NP_873240.1| - 0.0026 17.1 4.9 0.0052 16.1 4.8 2.0 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1664 PF07889.12 gi|33151887|ref|NP_873240.1| - 0.0064 16.5 4.8 0.015 15.4 4.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 gi|33151887|ref|NP_873240.1| - 0.03 14.4 8.6 0.041 13.9 8.6 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus LMBR1 PF04791.16 gi|33151887|ref|NP_873240.1| - 0.083 11.8 0.3 0.085 11.7 0.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Spo12 PF05032.12 gi|33151887|ref|NP_873240.1| - 0.11 12.4 0.1 0.29 11.1 0.1 1.7 1 0 0 1 1 1 0 Spo12 family Tweety PF04906.13 gi|33151887|ref|NP_873240.1| - 0.16 10.6 2.8 0.21 10.2 2.8 1.1 1 0 0 1 1 1 0 Tweety Ribosomal_S13 PF00416.22 gi|33151887|ref|NP_873240.1| - 0.2 12.1 2.1 0.93 9.9 0.6 2.1 1 1 1 2 2 2 0 Ribosomal protein S13/S18 FapA PF03961.13 gi|33151887|ref|NP_873240.1| - 0.26 9.8 5.3 0.31 9.6 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A IF-2B PF01008.17 gi|33151887|ref|NP_873240.1| - 0.29 10.3 4.2 0.38 9.9 4.2 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family Prominin PF05478.11 gi|33151887|ref|NP_873240.1| - 0.65 7.9 5.8 0.79 7.6 5.8 1.1 1 0 0 1 1 1 0 Prominin TMPIT PF07851.13 gi|33151887|ref|NP_873240.1| - 2.6 7.2 6.5 3.2 6.9 6.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF1811 PF08838.10 gi|33151887|ref|NP_873240.1| - 7 7.0 6.9 5.3 7.3 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1811) MttA_Hcf106 PF02416.16 gi|33151888|ref|NP_873241.1| - 6.3e-14 51.0 1.4 1e-13 50.4 1.4 1.4 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|33151888|ref|NP_873241.1| - 0.039 14.9 0.1 0.046 14.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ABC1 PF03109.16 gi|33151889|ref|NP_873242.1| - 2.4e-31 108.4 0.3 8e-31 106.7 0.1 2.0 2 0 0 2 2 2 1 ABC1 family SCP2 PF02036.17 gi|33151890|ref|NP_873243.1| - 2.2e-18 66.6 0.0 4.3e-18 65.7 0.0 1.4 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 gi|33151890|ref|NP_873243.1| - 0.023 15.0 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 Alkyl sulfatase C-terminal DUF3585 PF12130.8 gi|33151890|ref|NP_873243.1| - 0.52 10.5 6.9 1.2 9.3 2.6 2.2 2 0 0 2 2 2 0 Bivalent Mical/EHBP Rab binding domain Cep57_CLD_2 PF14197.6 gi|33151890|ref|NP_873243.1| - 1.1 9.4 6.2 0.22 11.7 1.9 2.1 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 SlyX PF04102.12 gi|33151890|ref|NP_873243.1| - 7.6 7.2 9.0 31 5.3 0.1 3.3 2 1 1 3 3 3 0 SlyX ABC_tran_CTD PF16326.5 gi|33151890|ref|NP_873243.1| - 9.3 6.6 8.4 2.5 8.4 2.0 3.0 3 1 0 3 3 3 0 ABC transporter C-terminal domain Ubie_methyltran PF01209.18 gi|33151891|ref|NP_873244.1| - 7.4e-102 339.6 0.1 8.5e-102 339.4 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 gi|33151891|ref|NP_873244.1| - 8.2e-24 84.1 0.0 1.6e-23 83.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33151891|ref|NP_873244.1| - 4.7e-22 78.5 0.0 8.7e-22 77.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33151891|ref|NP_873244.1| - 7.8e-20 71.2 0.0 1.3e-19 70.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33151891|ref|NP_873244.1| - 3.9e-16 59.3 0.0 5.7e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33151891|ref|NP_873244.1| - 1.3e-12 48.3 0.2 2.6e-12 47.3 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain PCMT PF01135.19 gi|33151891|ref|NP_873244.1| - 5e-06 26.4 0.0 8.1e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|33151891|ref|NP_873244.1| - 4e-05 23.4 0.0 8.6e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.15 gi|33151891|ref|NP_873244.1| - 5.2e-05 23.2 0.1 0.00028 20.8 0.0 2.2 2 1 1 3 3 3 1 Hypothetical methyltransferase MTS PF05175.14 gi|33151891|ref|NP_873244.1| - 0.00023 20.8 0.0 0.00041 19.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|33151891|ref|NP_873244.1| - 0.00057 19.5 0.1 0.00095 18.8 0.1 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 gi|33151891|ref|NP_873244.1| - 0.0084 15.4 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain FtsJ PF01728.19 gi|33151891|ref|NP_873244.1| - 0.012 15.8 0.0 0.049 13.7 0.0 2.0 1 1 0 1 1 1 0 FtsJ-like methyltransferase RrnaAD PF00398.20 gi|33151891|ref|NP_873244.1| - 0.026 13.6 0.0 0.05 12.7 0.0 1.5 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GCD14 PF08704.10 gi|33151891|ref|NP_873244.1| - 0.039 13.6 0.0 0.14 11.8 0.0 1.8 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltr_RsmB-F PF01189.17 gi|33151891|ref|NP_873244.1| - 0.053 13.2 0.0 0.2 11.3 0.0 1.8 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F NNMT_PNMT_TEMT PF01234.17 gi|33151891|ref|NP_873244.1| - 0.083 12.1 0.0 0.43 9.7 0.0 2.0 1 1 1 2 2 2 0 NNMT/PNMT/TEMT family CorA PF01544.18 gi|33151893|ref|NP_873246.1| - 4.8e-57 193.5 3.5 5.6e-57 193.3 3.5 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein tRNA_U5-meth_tr PF05958.11 gi|33151895|ref|NP_873248.1| - 1.2e-172 573.8 0.9 1.3e-172 573.7 0.9 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 gi|33151895|ref|NP_873248.1| - 9.5e-06 26.2 0.0 0.00012 22.7 0.0 2.5 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|33151895|ref|NP_873248.1| - 5.7e-05 22.6 0.2 0.00022 20.7 0.1 2.1 2 1 0 2 2 2 1 Putative methyltransferase Methyltransf_31 PF13847.6 gi|33151895|ref|NP_873248.1| - 9.7e-05 22.2 0.0 0.00017 21.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|33151895|ref|NP_873248.1| - 0.0004 20.0 0.0 0.00075 19.1 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|33151895|ref|NP_873248.1| - 0.0018 17.7 0.1 0.0031 16.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|33151895|ref|NP_873248.1| - 0.0022 17.6 0.2 0.0095 15.6 0.2 1.9 1 1 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|33151895|ref|NP_873248.1| - 0.0025 17.4 0.0 0.006 16.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|33151895|ref|NP_873248.1| - 0.0038 17.8 0.0 0.017 15.8 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|33151895|ref|NP_873248.1| - 0.012 15.4 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein DREV PF05219.12 gi|33151895|ref|NP_873248.1| - 0.049 12.7 0.0 0.094 11.8 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase Ubie_methyltran PF01209.18 gi|33151895|ref|NP_873248.1| - 0.16 11.3 0.1 0.25 10.6 0.1 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF413 PF04219.12 gi|33151896|ref|NP_873249.1| - 3.5e-34 116.7 0.1 4.2e-34 116.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF Pyridoxal_deC PF00282.19 gi|33151897|ref|NP_873250.1| - 1.4e-59 201.7 0.4 1.9e-59 201.3 0.4 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 gi|33151897|ref|NP_873250.1| - 5.2e-07 29.2 1.1 1.1e-06 28.2 1.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|33151897|ref|NP_873250.1| - 0.00053 19.0 1.6 0.002 17.1 1.6 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|33151897|ref|NP_873250.1| - 0.00071 18.8 0.0 0.0014 17.9 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II OKR_DC_1 PF01276.20 gi|33151897|ref|NP_873250.1| - 0.0019 17.0 0.1 0.0036 16.1 0.1 1.4 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain SepSecS PF05889.13 gi|33151897|ref|NP_873250.1| - 0.035 12.8 0.0 0.056 12.1 0.0 1.2 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_3 PF00202.21 gi|33151899|ref|NP_873252.1| - 7.9e-99 331.1 0.0 9.6e-99 330.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|33151899|ref|NP_873252.1| - 5.4e-05 22.5 0.0 0.00041 19.6 0.0 2.1 2 1 0 2 2 2 1 Aminotransferase class I and II Ribosomal_L33 PF00471.20 gi|33151900|ref|NP_873253.1| - 2.1e-19 69.7 2.2 2.4e-19 69.5 2.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L33 Ribosomal_L28 PF00830.19 gi|33151901|ref|NP_873254.1| - 2.5e-23 82.0 1.1 2.9e-23 81.8 1.1 1.1 1 0 0 1 1 1 1 Ribosomal L28 family RadC PF04002.15 gi|33151902|ref|NP_873255.1| - 8.8e-47 158.1 0.2 1.5e-46 157.3 0.2 1.3 1 0 0 1 1 1 1 RadC-like JAB domain HHH_2 PF12826.7 gi|33151902|ref|NP_873255.1| - 0.078 13.1 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|33151902|ref|NP_873255.1| - 0.14 12.8 0.0 0.29 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain DFP PF04127.15 gi|33151903|ref|NP_873256.1| - 1.1e-70 237.3 1.9 1.1e-70 237.3 1.9 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|33151903|ref|NP_873256.1| - 2.6e-44 150.7 0.5 4.5e-44 150.0 0.5 1.4 1 0 0 1 1 1 1 Flavoprotein PEP_hydrolase PF09370.10 gi|33151903|ref|NP_873256.1| - 0.00095 18.5 0.1 0.02 14.1 0.1 2.5 3 0 0 3 3 3 1 Phosphoenolpyruvate hydrolase-like NAD_Gly3P_dh_N PF01210.23 gi|33151903|ref|NP_873256.1| - 0.033 14.2 0.1 0.094 12.7 0.1 1.9 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus dUTPase PF00692.19 gi|33151904|ref|NP_873257.1| - 1.1e-42 144.8 0.0 1.2e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 dUTPase DUF1350 PF07082.11 gi|33151904|ref|NP_873257.1| - 0.02 14.2 0.0 1.4 8.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1350) TetR_N PF00440.23 gi|33151905|ref|NP_873258.1| - 7.5e-14 51.2 0.0 1.2e-13 50.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_6 PF01418.17 gi|33151905|ref|NP_873258.1| - 0.0029 17.6 0.0 0.013 15.5 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family TFCD_C PF12612.8 gi|33151905|ref|NP_873258.1| - 0.0044 16.9 0.2 1.4 8.7 0.0 2.3 1 1 0 2 2 2 2 Tubulin folding cofactor D C terminal HTH_Tnp_1_2 PF13022.6 gi|33151905|ref|NP_873258.1| - 0.0087 16.2 0.1 0.015 15.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase GP3_package PF16677.5 gi|33151905|ref|NP_873258.1| - 0.017 15.3 0.2 0.04 14.0 0.2 1.6 1 1 0 1 1 1 0 DNA-packaging protein gp3 HTH_29 PF13551.6 gi|33151905|ref|NP_873258.1| - 0.055 13.5 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix TetR_C_15 PF17918.1 gi|33151905|ref|NP_873258.1| - 0.11 13.3 0.1 0.46 11.3 0.0 2.2 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain UPF0270 PF06794.12 gi|33151906|ref|NP_873259.1| - 4.3e-29 100.4 0.4 4.7e-29 100.3 0.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) cNMP_binding PF00027.29 gi|33151907|ref|NP_873260.1| - 2.1e-21 75.8 0.0 3.1e-21 75.2 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 gi|33151907|ref|NP_873260.1| - 4.1e-14 52.3 0.3 7.5e-14 51.5 0.0 1.5 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain Crp PF00325.20 gi|33151907|ref|NP_873260.1| - 1.3e-10 40.8 0.2 2.3e-10 40.0 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_23 PF13384.6 gi|33151907|ref|NP_873260.1| - 3.8e-05 23.3 0.0 9.5e-05 22.1 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain MarR_2 PF12802.7 gi|33151907|ref|NP_873260.1| - 8.3e-05 22.4 0.0 0.00017 21.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|33151907|ref|NP_873260.1| - 0.00034 20.1 0.1 0.00063 19.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|33151907|ref|NP_873260.1| - 0.00058 19.8 0.0 0.0056 16.6 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|33151907|ref|NP_873260.1| - 0.0013 18.7 0.1 0.0033 17.3 0.1 1.7 1 0 0 1 1 1 1 MarR family RPA_C PF08784.11 gi|33151907|ref|NP_873260.1| - 0.004 17.8 0.1 0.0064 17.1 0.1 1.2 1 0 0 1 1 1 1 Replication protein A C terminal GntR PF00392.21 gi|33151907|ref|NP_873260.1| - 0.011 15.4 0.0 0.021 14.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Sigma70_r4 PF04545.16 gi|33151907|ref|NP_873260.1| - 0.017 14.6 0.2 0.035 13.6 0.2 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Rrf2 PF02082.20 gi|33151907|ref|NP_873260.1| - 0.018 15.4 0.1 0.061 13.7 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator HTH_11 PF08279.12 gi|33151907|ref|NP_873260.1| - 0.02 14.8 0.0 0.036 14.0 0.0 1.4 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 gi|33151907|ref|NP_873260.1| - 0.025 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RepL PF05732.11 gi|33151907|ref|NP_873260.1| - 0.035 13.5 0.1 0.48 9.8 0.1 2.1 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) Phage_rep_O PF04492.13 gi|33151907|ref|NP_873260.1| - 0.037 14.6 0.1 0.32 11.6 0.0 2.1 2 0 0 2 2 2 0 Bacteriophage replication protein O HTH_29 PF13551.6 gi|33151907|ref|NP_873260.1| - 0.052 13.6 0.0 0.26 11.3 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn helix Mig-14 PF07395.11 gi|33151907|ref|NP_873260.1| - 0.067 12.6 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 Mig-14 SgrR_N PF12793.7 gi|33151907|ref|NP_873260.1| - 0.12 12.6 0.0 0.25 11.6 0.0 1.6 1 1 0 1 1 1 0 Sugar transport-related sRNA regulator N-term GTP-bdg_N PF13167.6 gi|33151908|ref|NP_873261.1| - 8.4e-29 100.1 0.0 1.9e-28 98.9 0.0 1.7 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 gi|33151908|ref|NP_873261.1| - 1.9e-25 89.3 9.9 3.3e-25 88.5 9.9 1.4 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 gi|33151908|ref|NP_873261.1| - 1.1e-19 70.6 0.3 8.7e-19 67.7 0.1 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|33151908|ref|NP_873261.1| - 4.2e-06 26.4 0.2 8.9e-06 25.3 0.2 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|33151908|ref|NP_873261.1| - 8.2e-06 25.8 2.5 0.024 14.5 0.0 3.2 3 0 0 3 3 3 2 RsgA GTPase MnmE_helical PF12631.7 gi|33151908|ref|NP_873261.1| - 0.00055 20.2 0.2 0.0012 19.1 0.2 1.5 1 0 0 1 1 1 1 MnmE helical domain MMR_HSR1_Xtn PF16897.5 gi|33151908|ref|NP_873261.1| - 0.002 18.1 0.1 0.0047 16.9 0.1 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain G-alpha PF00503.20 gi|33151908|ref|NP_873261.1| - 0.011 14.9 0.1 0.11 11.7 0.1 2.1 1 1 1 2 2 2 0 G-protein alpha subunit ABC_tran PF00005.27 gi|33151908|ref|NP_873261.1| - 0.011 16.2 1.3 0.061 13.8 0.0 2.5 1 1 1 2 2 2 0 ABC transporter Dynamin_N PF00350.23 gi|33151908|ref|NP_873261.1| - 0.012 15.7 1.3 0.028 14.5 0.1 2.3 2 1 0 2 2 2 0 Dynamin family GTP_EFTU PF00009.27 gi|33151908|ref|NP_873261.1| - 0.04 13.5 0.5 4.4 6.8 0.0 2.6 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain AAA_29 PF13555.6 gi|33151908|ref|NP_873261.1| - 0.052 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|33151908|ref|NP_873261.1| - 0.071 13.6 0.3 0.071 13.6 0.3 2.6 1 1 1 2 2 2 0 AAA domain SRPRB PF09439.10 gi|33151908|ref|NP_873261.1| - 0.072 12.5 0.9 0.15 11.5 0.1 1.9 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit cobW PF02492.19 gi|33151908|ref|NP_873261.1| - 0.078 12.6 1.9 2.4 7.7 0.2 2.5 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Gtr1_RagA PF04670.12 gi|33151908|ref|NP_873261.1| - 0.098 12.0 0.1 0.24 10.7 0.0 1.7 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region ZnuA PF01297.17 gi|33151908|ref|NP_873261.1| - 0.12 11.7 0.1 0.32 10.4 0.0 1.6 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic Hfq PF17209.3 gi|33151909|ref|NP_873262.1| - 5.1e-30 102.9 0.2 7.7e-30 102.3 0.2 1.2 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 gi|33151909|ref|NP_873262.1| - 0.0066 16.1 0.0 0.0083 15.8 0.0 1.3 1 0 0 1 1 1 1 LSM domain IPPT PF01715.17 gi|33151910|ref|NP_873263.1| - 7.2e-85 284.4 0.1 8.8e-85 284.1 0.1 1.1 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 gi|33151910|ref|NP_873263.1| - 6.5e-09 35.5 0.0 2.3e-06 27.2 0.0 2.3 2 0 0 2 2 2 2 Isopentenyl transferase AAA_33 PF13671.6 gi|33151910|ref|NP_873263.1| - 0.00021 21.5 0.0 0.00073 19.7 0.0 1.9 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|33151910|ref|NP_873263.1| - 0.01 15.1 0.0 0.021 14.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 gi|33151910|ref|NP_873263.1| - 0.022 15.1 0.1 0.11 12.9 0.1 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|33151910|ref|NP_873263.1| - 0.093 13.3 0.0 0.21 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|33151910|ref|NP_873263.1| - 0.17 11.0 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain APS_kinase PF01583.20 gi|33151910|ref|NP_873263.1| - 0.18 11.7 0.0 0.41 10.5 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase DNA_mis_repair PF01119.19 gi|33151911|ref|NP_873264.1| - 9.9e-37 125.2 0.0 1.9e-36 124.3 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 gi|33151911|ref|NP_873264.1| - 3.2e-18 65.9 7.6 7.6e-18 64.7 7.6 1.6 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 gi|33151911|ref|NP_873264.1| - 2e-12 47.1 0.0 4.2e-12 46.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|33151911|ref|NP_873264.1| - 2.4e-07 31.3 0.0 5.3e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Virul_fac_BrkB PF03631.15 gi|33151912|ref|NP_873265.1| - 3e-56 190.9 31.4 3.4e-56 190.7 31.4 1.0 1 0 0 1 1 1 1 Virulence factor BrkB Tyr_Deacylase PF02580.16 gi|33151913|ref|NP_873266.1| - 2.4e-51 174.0 0.3 2.8e-51 173.8 0.3 1.0 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase Ricin_B_lectin PF00652.22 gi|33151914|ref|NP_873267.1| - 1.2e-23 83.8 2.6 1.6e-23 83.3 2.6 1.2 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 gi|33151914|ref|NP_873267.1| - 8.5e-11 42.4 0.0 3.7e-07 30.8 0.0 3.1 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like Na_H_antiport_1 PF06965.12 gi|33151915|ref|NP_873268.1| - 1.2e-145 485.1 28.2 1.3e-145 485.0 28.2 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 ACPS PF01648.20 gi|33151916|ref|NP_873269.1| - 2.2e-11 43.9 0.0 6.4e-11 42.4 0.0 1.8 2 1 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily Metallophos PF00149.28 gi|33151917|ref|NP_873270.1| - 2.2e-15 57.7 0.9 3.4e-15 57.1 0.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|33151917|ref|NP_873270.1| - 7e-08 32.8 1.1 1.8e-07 31.5 1.1 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Gln-synt_C PF00120.24 gi|33151918|ref|NP_873271.1| - 1e-133 445.7 0.0 1.2e-133 445.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|33151918|ref|NP_873271.1| - 7.9e-25 86.4 0.1 1.8e-24 85.3 0.1 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Frankia_peptide PF14407.6 gi|33151918|ref|NP_873271.1| - 0.1 12.6 0.0 0.26 11.3 0.0 1.7 1 0 0 1 1 1 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. YidD PF01809.18 gi|33151919|ref|NP_873272.1| - 2.2e-06 27.4 0.1 3.1e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor Ribonuclease_P PF00825.18 gi|33151920|ref|NP_873273.1| - 1.6e-28 99.0 0.8 1.8e-28 98.8 0.8 1.0 1 0 0 1 1 1 1 Ribonuclease P Ribosomal_L34 PF00468.17 gi|33151921|ref|NP_873274.1| - 2.8e-25 88.0 9.3 3e-25 87.9 9.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L34 Peptidase_M23 PF01551.22 gi|33151923|ref|NP_873276.1| - 6e-32 109.7 4.4 1.4e-30 105.4 2.3 2.4 2 0 0 2 2 2 1 Peptidase family M23 LysM PF01476.20 gi|33151923|ref|NP_873276.1| - 4.6e-11 42.6 0.1 2.5e-10 40.2 0.0 2.2 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 gi|33151923|ref|NP_873276.1| - 0.032 14.1 2.2 0.072 12.9 0.0 2.7 4 0 0 4 4 4 0 Biotin-lipoyl like Biotin_lipoyl PF00364.22 gi|33151923|ref|NP_873276.1| - 0.33 10.8 1.7 6.6 6.6 0.1 3.3 3 0 0 3 3 3 0 Biotin-requiring enzyme LysM PF01476.20 gi|33151924|ref|NP_873277.1| - 3.2e-08 33.5 0.1 6.9e-08 32.4 0.1 1.6 1 0 0 1 1 1 1 LysM domain SNARE_assoc PF09335.11 gi|33151925|ref|NP_873278.1| - 4.2e-11 43.4 8.8 4.2e-11 43.4 8.8 2.1 1 1 2 3 3 3 1 SNARE associated Golgi protein CbtB PF09489.10 gi|33151925|ref|NP_873278.1| - 0.33 11.1 1.1 34 4.7 0.0 2.7 3 0 0 3 3 3 0 Probable cobalt transporter subunit (CbtB) Fig1 PF12351.8 gi|33151925|ref|NP_873278.1| - 3.8 7.4 9.1 0.075 13.0 0.9 2.0 2 1 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 SurE PF01975.17 gi|33151926|ref|NP_873279.1| - 1.2e-57 194.9 0.0 1.4e-57 194.6 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE Glyco_transf_4 PF13439.6 gi|33151926|ref|NP_873279.1| - 0.037 14.0 0.0 0.057 13.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|33151926|ref|NP_873279.1| - 0.055 13.9 0.1 0.085 13.3 0.1 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain TIM PF00121.18 gi|33151927|ref|NP_873280.1| - 3.2e-92 308.3 0.8 3.6e-92 308.2 0.8 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase PMI_typeI PF01238.21 gi|33151928|ref|NP_873281.1| - 3.7e-63 214.0 0.0 5.8e-62 210.0 0.0 2.2 2 1 0 2 2 2 1 Phosphomannose isomerase type I Cupin_2 PF07883.11 gi|33151928|ref|NP_873281.1| - 0.021 14.5 0.0 1.1 9.0 0.0 2.3 2 0 0 2 2 2 0 Cupin domain AraC_binding PF02311.19 gi|33151928|ref|NP_873281.1| - 0.027 14.4 0.0 0.22 11.4 0.0 2.4 3 0 0 3 3 3 0 AraC-like ligand binding domain EIID-AGA PF03613.14 gi|33151929|ref|NP_873282.1| - 1.8e-109 365.0 0.7 2.1e-109 364.8 0.7 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component EII-Sor PF03609.14 gi|33151930|ref|NP_873283.1| - 5.1e-71 238.8 34.6 5.8e-71 238.6 34.6 1.0 1 0 0 1 1 1 1 PTS system sorbose-specific iic component DUF4538 PF15061.6 gi|33151930|ref|NP_873283.1| - 0.45 10.3 2.9 4.3 7.2 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) PTSIIB_sorb PF03830.15 gi|33151931|ref|NP_873284.1| - 2.1e-53 180.5 0.9 3.8e-53 179.7 0.9 1.4 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component EIIA-man PF03610.16 gi|33151931|ref|NP_873284.1| - 7.7e-30 103.5 0.3 1.9e-29 102.2 0.3 1.7 1 0 0 1 1 1 1 PTS system fructose IIA component T2SS-T3SS_pil_N PF13629.6 gi|33151931|ref|NP_873284.1| - 0.055 13.2 0.1 7 6.5 0.0 2.5 2 0 0 2 2 2 0 Pilus formation protein N terminal region PA_decarbox PF05870.11 gi|33151931|ref|NP_873284.1| - 0.1 12.2 0.5 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Phenolic acid decarboxylase (PAD) Glutaredoxin PF00462.24 gi|33151931|ref|NP_873284.1| - 0.15 12.3 0.3 2.7 8.3 0.1 2.8 3 0 0 3 3 3 0 Glutaredoxin YadA_anchor PF03895.15 gi|33151932|ref|NP_873285.1| - 2.6e-15 56.3 7.0 4.3e-15 55.6 7.0 1.4 1 0 0 1 1 1 1 YadA-like membrane anchor domain Toluene_X PF03349.16 gi|33151932|ref|NP_873285.1| - 0.0081 14.8 0.0 0.014 14.0 0.0 1.3 1 0 0 1 1 1 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) SURF4 PF02077.15 gi|33151932|ref|NP_873285.1| - 0.085 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 SURF4 family Syntaxin_2 PF14523.6 gi|33151932|ref|NP_873285.1| - 0.1 13.0 0.7 0.16 12.4 0.7 1.3 1 0 0 1 1 1 0 Syntaxin-like protein DUF21 PF01595.20 gi|33151933|ref|NP_873286.1| - 8.5e-43 146.1 10.9 1.3e-42 145.5 10.9 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|33151933|ref|NP_873286.1| - 1.6e-18 66.5 2.8 2.2e-18 66.1 0.1 2.5 3 0 0 3 3 3 1 Transporter associated domain CBS PF00571.28 gi|33151933|ref|NP_873286.1| - 2.4e-07 31.1 1.5 0.00058 20.2 0.1 2.8 2 0 0 2 2 2 2 CBS domain YceD PF02620.17 gi|33151934|ref|NP_873287.1| - 2e-16 60.2 0.3 2.6e-16 59.8 0.3 1.1 1 0 0 1 1 1 1 Large ribosomal RNA subunit accumulation protein YceD Ribosomal_L32p PF01783.23 gi|33151935|ref|NP_873288.1| - 4.5e-22 78.1 1.7 4.9e-22 78.0 1.7 1.0 1 0 0 1 1 1 1 Ribosomal L32p protein family FA_synthesis PF02504.15 gi|33151936|ref|NP_873289.1| - 6.5e-94 314.6 0.0 7.4e-94 314.4 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein ACP_syn_III_C PF08541.10 gi|33151937|ref|NP_873290.1| - 4.8e-35 119.6 0.5 1.8e-34 117.8 0.1 2.2 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|33151937|ref|NP_873290.1| - 2.6e-29 100.9 2.7 5.5e-29 99.9 2.7 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_N PF01154.17 gi|33151937|ref|NP_873290.1| - 0.0083 16.0 0.4 0.014 15.3 0.4 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ketoacyl-synt PF00109.26 gi|33151937|ref|NP_873290.1| - 0.011 15.4 9.7 0.029 13.9 4.4 2.3 1 1 1 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain Chal_sti_synt_N PF00195.19 gi|33151937|ref|NP_873290.1| - 1.4 8.3 5.3 1.8 7.9 3.7 2.0 2 1 0 2 2 2 0 Chalcone and stilbene synthases, N-terminal domain Methyltransf_4 PF02390.17 gi|33151938|ref|NP_873291.1| - 1e-57 194.4 0.0 1.4e-57 193.9 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_25 PF13649.6 gi|33151938|ref|NP_873291.1| - 0.00021 21.9 0.0 0.0011 19.6 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33151938|ref|NP_873291.1| - 0.039 14.6 0.0 0.13 12.9 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain DUF469 PF04320.14 gi|33151939|ref|NP_873292.1| - 4.8e-37 126.9 0.2 5.5e-37 126.7 0.2 1.0 1 0 0 1 1 1 1 Protein with unknown function (DUF469) Dehydratase_hem PF13816.6 gi|33151939|ref|NP_873292.1| - 0.042 13.2 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 Haem-containing dehydratase YGGT PF02325.17 gi|33151940|ref|NP_873293.1| - 3.3e-27 94.7 10.7 5.8e-16 58.7 0.9 2.3 2 0 0 2 2 2 2 YGGT family DUF167 PF02594.16 gi|33151941|ref|NP_873294.1| - 5.1e-25 87.4 0.0 5.9e-25 87.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 PhnA PF03831.14 gi|33151942|ref|NP_873295.1| - 1.6e-25 88.8 4.2 2.1e-25 88.3 4.2 1.2 1 0 0 1 1 1 1 PhnA domain PhnA_Zn_Ribbon PF08274.12 gi|33151942|ref|NP_873295.1| - 5.8e-14 51.7 3.1 1.2e-13 50.7 3.1 1.6 1 0 0 1 1 1 1 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.12 gi|33151942|ref|NP_873295.1| - 0.0015 18.0 3.3 0.0032 17.0 3.1 1.7 1 1 0 1 1 1 1 TFIIB zinc-binding zf-Mss51 PF13824.6 gi|33151942|ref|NP_873295.1| - 0.0015 18.6 1.0 0.0024 17.9 1.0 1.4 1 0 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 OrfB_Zn_ribbon PF07282.11 gi|33151942|ref|NP_873295.1| - 0.032 14.2 0.4 0.061 13.3 0.4 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_10 PF10058.9 gi|33151942|ref|NP_873295.1| - 0.038 13.7 1.7 0.08 12.7 1.7 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein PADR1 PF08063.12 gi|33151942|ref|NP_873295.1| - 0.046 13.5 1.6 0.073 12.9 1.6 1.3 1 0 0 1 1 1 0 PADR1 (NUC008) domain DUF2318 PF10080.9 gi|33151942|ref|NP_873295.1| - 0.096 12.8 0.4 0.2 11.8 0.2 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2318) TFIIS_C PF01096.18 gi|33151942|ref|NP_873295.1| - 0.11 12.4 5.8 6.8 6.6 4.1 2.6 2 1 0 2 2 2 0 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 gi|33151942|ref|NP_873295.1| - 0.16 11.9 3.3 4.6 7.3 4.0 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DUF3039 PF11238.8 gi|33151942|ref|NP_873295.1| - 7.8 6.3 8.0 1.4 8.7 1.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3039) OAD_beta PF03977.13 gi|33151943|ref|NP_873296.1| - 4e-157 522.7 29.2 4.8e-157 522.4 29.2 1.1 1 0 0 1 1 1 1 Na+-transporting oxaloacetate decarboxylase beta subunit HMGL-like PF00682.19 gi|33151944|ref|NP_873297.1| - 2.9e-66 223.8 0.0 4.2e-66 223.2 0.0 1.2 1 0 0 1 1 1 1 HMGL-like PYC_OADA PF02436.18 gi|33151944|ref|NP_873297.1| - 2.7e-53 180.7 3.7 8.5e-53 179.1 0.7 2.4 1 1 1 2 2 2 1 Conserved carboxylase domain Biotin_lipoyl PF00364.22 gi|33151944|ref|NP_873297.1| - 7.2e-17 61.0 3.1 7.2e-17 61.0 3.1 2.3 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|33151944|ref|NP_873297.1| - 3.5e-09 36.3 8.2 3.9e-06 26.6 0.0 3.0 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_D23 PF16576.5 gi|33151944|ref|NP_873297.1| - 0.00024 20.4 1.8 0.066 12.4 0.1 2.6 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 gi|33151944|ref|NP_873297.1| - 0.003 18.2 3.2 0.41 11.4 0.1 3.0 3 0 0 3 3 3 2 HlyD family secretion protein Peptidase_M23 PF01551.22 gi|33151944|ref|NP_873297.1| - 0.051 13.8 0.2 0.13 12.5 0.2 1.7 1 0 0 1 1 1 0 Peptidase family M23 PTS_EIIA_1 PF00358.20 gi|33151944|ref|NP_873297.1| - 0.42 10.4 4.4 6 6.6 0.1 3.2 3 1 0 3 3 3 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RnfC_N PF13375.6 gi|33151944|ref|NP_873297.1| - 0.76 9.8 3.6 2.7 8.0 2.0 2.8 2 1 0 2 2 2 0 RnfC Barrel sandwich hybrid domain OAD_gamma PF04277.13 gi|33151945|ref|NP_873298.1| - 5.3e-18 65.4 0.0 6.1e-18 65.2 0.0 1.0 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain OppC_N PF12911.7 gi|33151945|ref|NP_873298.1| - 0.13 12.2 1.8 0.22 11.5 1.8 1.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF4834 PF16118.5 gi|33151945|ref|NP_873298.1| - 0.2 12.7 0.0 0.28 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Bac_DnaA PF00308.18 gi|33151946|ref|NP_873299.1| - 6.9e-17 62.0 1.9 1.3e-15 57.8 1.9 2.1 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_14 PF13173.6 gi|33151946|ref|NP_873299.1| - 7e-05 22.9 0.0 0.00016 21.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|33151946|ref|NP_873299.1| - 0.00091 19.2 0.2 0.0064 16.4 0.0 1.9 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea DNA_pol3_delta PF06144.13 gi|33151946|ref|NP_873299.1| - 0.0012 18.6 1.2 0.002 18.0 1.2 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit RNA_helicase PF00910.22 gi|33151946|ref|NP_873299.1| - 0.0017 18.7 0.0 0.0033 17.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 gi|33151946|ref|NP_873299.1| - 0.002 18.5 0.3 0.0064 16.9 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_35 PF14516.6 gi|33151946|ref|NP_873299.1| - 0.0021 16.9 2.7 0.006 15.5 2.2 1.9 1 1 0 1 1 1 1 AAA-like domain AAA_22 PF13401.6 gi|33151946|ref|NP_873299.1| - 0.017 15.4 0.9 0.57 10.5 0.0 2.5 1 1 1 2 2 2 0 AAA domain 6PF2K PF01591.18 gi|33151946|ref|NP_873299.1| - 0.028 13.7 0.0 0.043 13.1 0.0 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF815 PF05673.13 gi|33151946|ref|NP_873299.1| - 0.039 13.1 0.0 0.057 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA PF00004.29 gi|33151946|ref|NP_873299.1| - 0.044 14.2 0.3 0.36 11.3 0.1 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|33151946|ref|NP_873299.1| - 0.059 13.9 0.4 1.1 9.7 0.4 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|33151946|ref|NP_873299.1| - 0.071 12.8 0.1 2.1 8.1 0.1 2.2 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|33151946|ref|NP_873299.1| - 0.12 12.6 0.0 0.23 11.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|33151947|ref|NP_873300.1| - 1.1e-25 90.7 0.0 1.4e-25 90.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33151947|ref|NP_873300.1| - 0.0038 17.1 0.9 0.12 12.1 0.2 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF3584 PF12128.8 gi|33151947|ref|NP_873300.1| - 0.042 11.4 0.0 0.058 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_16 PF13191.6 gi|33151947|ref|NP_873300.1| - 0.12 12.7 0.0 0.19 12.1 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 gi|33151947|ref|NP_873300.1| - 0.15 11.5 0.0 7.4 5.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain CcmB PF03379.13 gi|33151948|ref|NP_873301.1| - 1.8e-82 276.0 26.7 2.1e-82 275.8 26.7 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.24 gi|33151948|ref|NP_873301.1| - 2.5e-06 27.1 9.1 2.5e-06 27.1 9.1 1.9 1 1 1 2 2 2 1 ABC-2 type transporter Cytochrom_C_asm PF01578.20 gi|33151949|ref|NP_873302.1| - 1.1e-33 116.8 22.7 1.1e-33 116.8 22.7 1.4 2 0 0 2 2 2 1 Cytochrome C assembly protein HlyE PF06109.13 gi|33151949|ref|NP_873302.1| - 0.5 9.6 1.7 0.44 9.8 0.3 1.5 2 0 0 2 2 2 0 Haemolysin E (HlyE) CcmD PF04995.14 gi|33151950|ref|NP_873303.1| - 2.2e-13 50.0 1.1 2.6e-13 49.8 1.1 1.2 1 0 0 1 1 1 1 Heme exporter protein D (CcmD) CcmE PF03100.15 gi|33151951|ref|NP_873304.1| - 3.2e-45 153.3 0.1 5.5e-45 152.5 0.0 1.4 2 0 0 2 2 2 1 CcmE CcmF_C PF16327.5 gi|33151952|ref|NP_873305.1| - 2.5e-122 408.2 8.7 2.5e-122 408.2 8.7 2.8 3 1 0 3 3 3 1 Cytochrome c-type biogenesis protein CcmF C-terminal Cytochrom_C_asm PF01578.20 gi|33151952|ref|NP_873305.1| - 2.1e-55 187.8 23.1 2.1e-55 187.8 23.1 3.6 3 1 0 3 3 3 1 Cytochrome C assembly protein ResB PF05140.14 gi|33151952|ref|NP_873305.1| - 0.02 13.7 2.6 0.41 9.3 0.2 2.5 1 1 0 2 2 2 0 ResB-like family DUF2730 PF10805.8 gi|33151952|ref|NP_873305.1| - 0.14 12.3 0.0 0.41 10.8 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Sulf_transp PF04143.14 gi|33151953|ref|NP_873306.1| - 1.4e-92 310.5 31.5 1.7e-92 310.3 31.5 1.0 1 0 0 1 1 1 1 Sulphur transport DUF5357 PF17310.2 gi|33151953|ref|NP_873306.1| - 0.012 14.2 6.9 0.019 13.5 6.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5357) Rhodanese PF00581.20 gi|33151955|ref|NP_873308.1| - 1.2e-28 99.7 1.8 9.7e-11 42.2 0.1 3.1 3 0 0 3 3 3 3 Rhodanese-like domain SBP_bac_3 PF00497.20 gi|33151956|ref|NP_873309.1| - 4.2e-26 91.8 0.0 6.4e-26 91.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 SLT PF01464.20 gi|33151956|ref|NP_873309.1| - 1.1e-21 76.7 0.0 2.2e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transglycosylase SLT domain BON PF04972.17 gi|33151958|ref|NP_873311.1| - 5.1e-31 106.8 11.4 1.9e-16 60.1 2.5 2.3 2 0 0 2 2 2 2 BON domain AcetylCoA_hyd_C PF13336.6 gi|33151958|ref|NP_873311.1| - 0.03 14.3 0.3 0.045 13.7 0.3 1.2 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain S-AdoMet_synt_N PF00438.20 gi|33151958|ref|NP_873311.1| - 0.31 11.7 4.2 1.8 9.3 0.6 2.4 1 1 1 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain SIS_2 PF13580.6 gi|33151959|ref|NP_873312.1| - 3e-20 72.7 0.3 3.6e-20 72.4 0.3 1.1 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 gi|33151959|ref|NP_873312.1| - 9.4e-08 32.0 0.1 1.3e-05 25.1 0.0 2.2 2 0 0 2 2 2 2 SIS domain AA_kinase PF00696.28 gi|33151959|ref|NP_873312.1| - 0.0035 17.0 0.1 0.0052 16.4 0.1 1.3 1 1 0 1 1 1 1 Amino acid kinase family DUF2529 PF10740.9 gi|33151959|ref|NP_873312.1| - 0.026 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) UPF0102 PF02021.17 gi|33151960|ref|NP_873313.1| - 5.5e-25 87.4 0.1 6.5e-25 87.2 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 Vsr PF03852.15 gi|33151960|ref|NP_873313.1| - 0.0031 17.3 0.0 0.0084 15.9 0.0 1.6 2 0 0 2 2 2 1 DNA mismatch endonuclease Vsr LppC PF04348.13 gi|33151961|ref|NP_873314.1| - 1.5e-164 548.8 21.9 1.7e-164 548.6 21.9 1.0 1 0 0 1 1 1 1 LppC putative lipoprotein Peripla_BP_6 PF13458.6 gi|33151961|ref|NP_873314.1| - 3e-05 23.8 0.3 0.00012 21.8 0.3 1.9 1 1 0 1 1 1 1 Periplasmic binding protein TP_methylase PF00590.20 gi|33151962|ref|NP_873315.1| - 2.5e-24 86.4 0.0 4e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases OMP_b-brl PF13505.6 gi|33151963|ref|NP_873316.1| - 1.8e-07 31.5 0.2 3e-07 30.7 0.2 1.4 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain OmpA_membrane PF01389.17 gi|33151963|ref|NP_873316.1| - 0.00013 21.7 1.7 0.017 14.9 0.5 2.2 1 1 1 2 2 2 2 OmpA-like transmembrane domain EpmC PF04315.12 gi|33151964|ref|NP_873317.1| - 2e-73 245.4 1.2 2.4e-73 245.2 1.2 1.0 1 0 0 1 1 1 1 Elongation factor P hydroxylase DsbC PF11412.8 gi|33151965|ref|NP_873318.1| - 3.2e-32 111.1 0.3 5.1e-32 110.5 0.3 1.3 1 0 0 1 1 1 1 Disulphide bond corrector protein DsbC DsbD PF02683.15 gi|33151965|ref|NP_873318.1| - 6.7e-16 58.8 19.3 1.4e-15 57.8 19.3 1.5 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_2 PF13098.6 gi|33151965|ref|NP_873318.1| - 1.1e-11 45.1 0.0 2.1e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 gi|33151965|ref|NP_873318.1| - 3.2e-11 43.2 0.1 7.4e-11 42.1 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|33151965|ref|NP_873318.1| - 3.2e-09 36.7 0.1 5.4e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin DsbD_2 PF13386.6 gi|33151965|ref|NP_873318.1| - 4e-09 36.7 28.1 9.5e-09 35.5 23.4 3.1 2 1 1 3 3 3 2 Cytochrome C biogenesis protein transmembrane region AhpC-TSA PF00578.21 gi|33151965|ref|NP_873318.1| - 0.013 15.5 0.1 0.027 14.4 0.1 1.5 1 0 0 1 1 1 0 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|33151965|ref|NP_873318.1| - 0.015 15.6 0.2 6.9 7.1 0.0 2.4 1 1 0 2 2 2 0 Thioredoxin-like YrhC PF14143.6 gi|33151965|ref|NP_873318.1| - 8 6.6 7.8 0.62 10.2 1.6 2.5 2 0 0 2 2 2 0 YrhC-like protein Na_Ca_ex PF01699.24 gi|33151967|ref|NP_873320.1| - 8.8e-60 201.0 35.4 2.8e-34 118.3 9.9 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF809 PF05663.11 gi|33151967|ref|NP_873320.1| - 0.75 9.9 2.2 1.7 8.8 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF809) ABC_tran PF00005.27 gi|33151968|ref|NP_873321.1| - 3e-34 118.5 0.0 4.2e-34 118.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33151968|ref|NP_873321.1| - 9.9e-13 48.6 1.1 1.3e-07 31.8 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33151968|ref|NP_873321.1| - 2e-07 30.7 0.1 2.9e-06 26.9 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|33151968|ref|NP_873321.1| - 2.5e-05 24.2 0.2 0.077 12.7 0.2 2.2 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|33151968|ref|NP_873321.1| - 3.9e-05 23.6 0.1 9.4e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|33151968|ref|NP_873321.1| - 6.3e-05 22.6 0.0 0.00013 21.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|33151968|ref|NP_873321.1| - 0.00078 19.7 0.3 0.0069 16.7 0.3 2.2 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|33151968|ref|NP_873321.1| - 0.0011 17.8 1.2 0.094 11.5 0.2 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_13 PF13166.6 gi|33151968|ref|NP_873321.1| - 0.0013 17.5 0.1 0.53 8.9 0.0 2.3 3 0 0 3 3 3 2 AAA domain AAA_7 PF12775.7 gi|33151968|ref|NP_873321.1| - 0.0026 17.3 0.0 0.0048 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|33151968|ref|NP_873321.1| - 0.0077 16.6 0.2 0.014 15.8 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|33151968|ref|NP_873321.1| - 0.026 14.3 0.1 0.042 13.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|33151968|ref|NP_873321.1| - 0.029 14.9 0.6 0.058 13.9 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|33151968|ref|NP_873321.1| - 0.036 13.6 0.2 0.47 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|33151968|ref|NP_873321.1| - 0.037 13.8 0.1 0.26 11.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|33151968|ref|NP_873321.1| - 0.053 13.3 0.1 0.4 10.4 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.29 gi|33151968|ref|NP_873321.1| - 0.054 13.9 0.1 6.6 7.2 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|33151968|ref|NP_873321.1| - 0.069 13.2 0.1 0.16 12.1 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|33151968|ref|NP_873321.1| - 0.072 13.3 0.1 0.27 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain Septin PF00735.18 gi|33151968|ref|NP_873321.1| - 0.076 12.3 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Septin CobU PF02283.16 gi|33151968|ref|NP_873321.1| - 0.077 12.6 0.8 0.15 11.7 0.1 1.8 2 1 1 3 3 3 0 Cobinamide kinase / cobinamide phosphate guanyltransferase NACHT PF05729.12 gi|33151968|ref|NP_873321.1| - 0.084 12.8 0.3 0.12 12.3 0.3 1.5 1 1 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|33151968|ref|NP_873321.1| - 0.087 13.0 0.0 0.24 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|33151968|ref|NP_873321.1| - 0.094 12.1 0.0 0.15 11.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|33151968|ref|NP_873321.1| - 0.14 12.7 0.1 0.29 11.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|33151968|ref|NP_873321.1| - 0.18 11.0 0.0 0.19 10.8 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit SBP_bac_3 PF00497.20 gi|33151969|ref|NP_873322.1| - 4e-61 206.3 5.3 4.5e-61 206.1 5.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|33151969|ref|NP_873322.1| - 1.8e-05 24.9 0.4 0.00019 21.6 0.1 2.5 2 1 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site Metallophos_2 PF12850.7 gi|33151969|ref|NP_873322.1| - 0.0007 19.8 0.1 0.00096 19.4 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Hom_end_hint PF05203.16 gi|33151969|ref|NP_873322.1| - 0.055 13.4 0.1 0.098 12.6 0.1 1.3 1 1 0 1 1 1 0 Hom_end-associated Hint BPD_transp_1 PF00528.22 gi|33151970|ref|NP_873323.1| - 1e-15 58.0 7.2 1e-15 58.0 7.2 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Mannosyl_trans4 PF15971.5 gi|33151970|ref|NP_873323.1| - 0.012 15.5 4.0 0.099 12.5 3.0 2.6 1 1 1 2 2 2 0 DolP-mannose mannosyltransferase TMEM43 PF07787.12 gi|33151970|ref|NP_873323.1| - 4.8 6.5 6.0 0.52 9.6 1.7 1.6 2 0 0 2 2 2 0 Transmembrane protein 43 BPD_transp_1 PF00528.22 gi|33151971|ref|NP_873324.1| - 2.1e-13 50.4 15.2 2.1e-13 50.4 15.2 1.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SMC_N PF02463.19 gi|33151972|ref|NP_873325.1| - 2e-20 73.2 0.0 4.5e-20 72.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|33151972|ref|NP_873325.1| - 1.7e-13 51.5 20.9 7.6e-11 42.9 20.9 2.6 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|33151972|ref|NP_873325.1| - 1.8e-06 28.0 0.1 0.069 12.9 0.1 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|33151972|ref|NP_873325.1| - 1e-05 25.2 0.1 2.5e-05 23.9 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|33151972|ref|NP_873325.1| - 3.8e-05 23.6 9.9 0.00012 22.0 9.9 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|33151972|ref|NP_873325.1| - 0.0018 18.6 3.9 0.024 14.9 0.0 3.7 1 1 2 4 4 4 1 AAA domain LsmAD PF06741.13 gi|33151972|ref|NP_873325.1| - 0.16 12.5 1.5 0.5 10.9 0.1 2.5 2 0 0 2 2 2 0 LsmAD domain RsgA_GTPase PF03193.16 gi|33151972|ref|NP_873325.1| - 0.49 10.3 0.0 0.49 10.3 0.0 3.6 4 2 0 4 4 4 0 RsgA GTPase LpxC PF03331.13 gi|33151973|ref|NP_873326.1| - 3.2e-104 348.2 0.0 3.7e-104 348.0 0.0 1.0 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase Tubulin PF00091.25 gi|33151974|ref|NP_873327.1| - 1.1e-40 140.0 1.3 1.7e-40 139.3 1.3 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|33151974|ref|NP_873327.1| - 3.1e-31 107.5 0.8 3.1e-31 107.5 0.8 2.1 2 1 0 2 2 2 1 FtsZ family, C-terminal domain FtsA PF14450.6 gi|33151975|ref|NP_873328.1| - 5.4e-34 116.7 2.4 1.4e-23 83.3 0.0 2.6 2 1 0 2 2 2 2 Cell division protein FtsA SHS2_FTSA PF02491.20 gi|33151975|ref|NP_873328.1| - 1.3e-20 73.5 1.2 2.9e-20 72.5 0.2 2.1 2 0 0 2 2 2 1 SHS2 domain inserted in FTSA PilM_2 PF11104.8 gi|33151975|ref|NP_873328.1| - 6.3e-11 41.9 1.2 4.3e-09 35.9 0.6 2.9 2 1 0 2 2 2 1 Type IV pilus assembly protein PilM; MreB_Mbl PF06723.13 gi|33151975|ref|NP_873328.1| - 5.1e-10 38.7 0.1 5.1e-10 38.7 0.1 1.9 3 0 0 3 3 3 1 MreB/Mbl protein BON PF04972.17 gi|33151975|ref|NP_873328.1| - 0.009 16.3 0.1 0.099 13.0 0.0 2.8 2 1 1 3 3 3 1 BON domain DDR PF08841.10 gi|33151975|ref|NP_873328.1| - 0.019 14.0 0.0 0.043 12.8 0.0 1.6 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain DUF5496 PF17600.2 gi|33151975|ref|NP_873328.1| - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5496) HSP70 PF00012.20 gi|33151975|ref|NP_873328.1| - 0.2 9.8 2.2 4.5 5.3 0.0 2.7 3 0 0 3 3 3 0 Hsp70 protein FtsQ PF03799.15 gi|33151976|ref|NP_873329.1| - 1.3e-22 80.8 0.0 1.9e-22 80.3 0.0 1.3 1 0 0 1 1 1 1 Cell division protein FtsQ POTRA_1 PF08478.10 gi|33151976|ref|NP_873329.1| - 4.9e-15 55.6 0.0 9e-15 54.7 0.0 1.5 1 0 0 1 1 1 1 POTRA domain, FtsQ-type Dala_Dala_lig_C PF07478.13 gi|33151977|ref|NP_873330.1| - 1.1e-61 207.9 0.1 1.4e-61 207.6 0.1 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 gi|33151977|ref|NP_873330.1| - 1.5e-19 70.3 1.6 3.5e-18 66.0 1.6 2.4 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp_4 PF13535.6 gi|33151977|ref|NP_873330.1| - 8e-10 38.5 1.2 7.1e-09 35.4 0.2 2.4 2 1 0 2 2 2 1 ATP-grasp domain RimK PF08443.11 gi|33151977|ref|NP_873330.1| - 2.6e-06 27.1 0.0 4.6e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|33151977|ref|NP_873330.1| - 3.6e-05 23.8 0.1 8.9e-05 22.6 0.1 1.7 1 1 0 1 1 1 1 ATP-grasp domain R2K_2 PF18299.1 gi|33151977|ref|NP_873330.1| - 5.6e-05 23.0 0.0 9.4e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 2 ATPgrasp_Ter PF15632.6 gi|33151977|ref|NP_873330.1| - 0.00049 19.9 0.1 0.0034 17.1 0.1 2.1 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|33151977|ref|NP_873330.1| - 0.00049 19.7 0.1 0.0014 18.1 0.1 1.7 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|33151977|ref|NP_873330.1| - 0.00061 19.1 0.0 0.066 12.5 0.0 2.1 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 gi|33151977|ref|NP_873330.1| - 0.0013 18.4 0.1 0.0044 16.6 0.1 1.8 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|33151977|ref|NP_873330.1| - 0.0018 18.1 0.0 0.003 17.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TTL PF03133.15 gi|33151977|ref|NP_873330.1| - 0.07 12.2 0.0 0.13 11.4 0.0 1.4 2 0 0 2 2 2 0 Tubulin-tyrosine ligase family Mur_ligase PF01225.25 gi|33151978|ref|NP_873331.1| - 8.5e-29 99.7 2.1 8.5e-29 99.7 2.1 1.9 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_M PF08245.12 gi|33151978|ref|NP_873331.1| - 1.1e-27 97.3 0.0 1.9e-27 96.5 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|33151978|ref|NP_873331.1| - 2.3e-23 82.3 0.1 3.8e-22 78.3 0.0 2.5 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Glyco_transf_28 PF03033.20 gi|33151979|ref|NP_873332.1| - 1.3e-48 164.5 0.2 2.6e-48 163.6 0.2 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_tran_28_C PF04101.16 gi|33151979|ref|NP_873332.1| - 8.6e-43 146.2 0.2 1.4e-42 145.5 0.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 gi|33151979|ref|NP_873332.1| - 2.1e-06 28.2 0.1 8.9e-06 26.2 0.1 2.2 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|33151979|ref|NP_873332.1| - 6.2e-05 23.1 0.0 0.00044 20.3 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|33151979|ref|NP_873332.1| - 8.9e-05 22.5 0.0 0.00021 21.3 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_3 PF13528.6 gi|33151979|ref|NP_873332.1| - 0.0014 18.0 0.0 0.0023 17.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 1 UDPGT PF00201.18 gi|33151979|ref|NP_873332.1| - 0.0017 17.2 0.0 0.0028 16.5 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_4_4 PF13579.6 gi|33151979|ref|NP_873332.1| - 0.02 15.3 0.0 0.058 13.8 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain ADK PF00406.22 gi|33151980|ref|NP_873333.1| - 6e-59 198.5 0.0 7.4e-59 198.2 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|33151980|ref|NP_873333.1| - 2.3e-25 89.6 0.1 4.6e-25 88.6 0.0 1.5 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 gi|33151980|ref|NP_873333.1| - 7.2e-15 54.7 0.0 1.6e-14 53.6 0.0 1.6 2 0 0 2 2 2 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 gi|33151980|ref|NP_873333.1| - 0.00013 22.3 0.1 0.38 11.0 0.1 2.4 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_18 PF13238.6 gi|33151980|ref|NP_873333.1| - 0.0079 16.7 0.0 0.02 15.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|33151980|ref|NP_873333.1| - 0.013 15.2 0.2 1.3 8.7 0.0 2.5 3 0 0 3 3 3 0 Thymidylate kinase AAA_33 PF13671.6 gi|33151980|ref|NP_873333.1| - 0.024 14.8 0.1 0.42 10.8 0.0 2.3 3 0 0 3 3 3 0 AAA domain Cytidylate_kin PF02224.18 gi|33151980|ref|NP_873333.1| - 0.076 12.7 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase MFS_1 PF07690.16 gi|33151981|ref|NP_873334.1| - 7e-17 61.4 49.3 4.2e-15 55.5 37.6 3.0 1 1 2 3 3 3 3 Major Facilitator Superfamily Acatn PF13000.7 gi|33151981|ref|NP_873334.1| - 2.2e-09 36.4 18.1 2.6e-09 36.2 9.1 2.9 2 1 0 2 2 2 1 Acetyl-coenzyme A transporter 1 DUF1290 PF06947.12 gi|33151981|ref|NP_873334.1| - 9.4 6.4 9.5 2.7 8.1 0.6 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF1290) Epimerase PF01370.21 gi|33151982|ref|NP_873335.1| - 9.6e-56 188.9 0.1 1.2e-55 188.7 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|33151982|ref|NP_873335.1| - 8.6e-55 186.4 0.0 1e-54 186.2 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|33151982|ref|NP_873335.1| - 9e-16 57.9 0.7 6.2e-15 55.1 0.7 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|33151982|ref|NP_873335.1| - 2.4e-15 56.3 0.1 3.6e-15 55.7 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|33151982|ref|NP_873335.1| - 2.3e-09 36.8 0.3 5.6e-06 25.7 0.0 2.3 1 1 1 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.17 gi|33151982|ref|NP_873335.1| - 2.2e-08 33.6 0.0 3.6e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 gi|33151982|ref|NP_873335.1| - 2e-05 24.1 0.4 4.2e-05 23.1 0.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.6 gi|33151982|ref|NP_873335.1| - 0.00025 21.0 0.0 0.00037 20.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|33151982|ref|NP_873335.1| - 0.00039 20.4 0.0 0.00074 19.5 0.0 1.3 1 0 0 1 1 1 1 KR domain Methyltransf_31 PF13847.6 gi|33151982|ref|NP_873335.1| - 0.08 12.7 0.0 11 5.8 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain TrkA_N PF02254.18 gi|33151982|ref|NP_873335.1| - 0.092 13.0 0.2 0.18 12.1 0.2 1.6 1 0 0 1 1 1 0 TrkA-N domain DNA_ligase_aden PF01653.18 gi|33151983|ref|NP_873336.1| - 1.2e-133 445.1 0.0 2.1e-133 444.3 0.0 1.4 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 gi|33151983|ref|NP_873336.1| - 8.7e-34 115.3 2.1 8.7e-34 115.3 2.1 1.8 2 0 0 2 2 2 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 gi|33151983|ref|NP_873336.1| - 1.5e-21 76.3 0.3 1.6e-20 73.0 0.1 2.6 2 1 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|33151983|ref|NP_873336.1| - 1.1e-15 58.0 0.0 1e-06 29.2 0.0 2.8 2 0 0 2 2 2 2 Helix-hairpin-helix domain BRCT PF00533.26 gi|33151983|ref|NP_873336.1| - 2.7e-15 56.5 0.0 5.6e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain DNA_ligase_ZBD PF03119.16 gi|33151983|ref|NP_873336.1| - 1.1e-10 41.3 4.3 2.1e-10 40.4 4.3 1.5 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain HHH PF00633.23 gi|33151983|ref|NP_873336.1| - 2.4e-06 27.1 0.0 0.00011 21.8 0.0 3.2 3 0 0 3 3 3 1 Helix-hairpin-helix motif PTCB-BRCT PF12738.7 gi|33151983|ref|NP_873336.1| - 0.00015 21.6 0.0 0.00031 20.6 0.0 1.4 1 0 0 1 1 1 1 twin BRCT domain HHH_3 PF12836.7 gi|33151983|ref|NP_873336.1| - 0.00028 21.1 0.5 0.076 13.3 0.0 3.9 4 0 0 4 4 4 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|33151983|ref|NP_873336.1| - 0.0027 18.3 1.2 0.019 15.6 0.0 3.1 5 0 0 5 5 5 1 5'-3' exonuclease, C-terminal SAM fold ZipA_C PF04354.13 gi|33151984|ref|NP_873337.1| - 6.7e-41 139.1 0.2 9.4e-41 138.7 0.2 1.2 1 0 0 1 1 1 1 ZipA, C-terminal FtsZ-binding domain EI24 PF07264.11 gi|33151985|ref|NP_873338.1| - 6.6e-34 117.7 25.5 8.5e-34 117.3 25.5 1.1 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) 6PGD PF00393.19 gi|33151986|ref|NP_873339.1| - 2.5e-124 414.4 0.0 3.1e-124 414.1 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|33151986|ref|NP_873339.1| - 2.5e-52 177.2 0.0 4.2e-52 176.5 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|33151986|ref|NP_873339.1| - 0.0068 17.0 0.1 0.03 14.9 0.1 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 gi|33151986|ref|NP_873339.1| - 0.016 15.4 0.1 0.063 13.5 0.0 2.1 2 0 0 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|33151986|ref|NP_873339.1| - 0.018 14.4 0.1 0.033 13.6 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MFS_1 PF07690.16 gi|33151987|ref|NP_873340.1| - 1.6e-41 142.4 55.2 7.9e-33 113.8 26.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|33151987|ref|NP_873340.1| - 5.1e-20 71.8 45.5 6.6e-19 68.1 45.5 3.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_4 PF06779.14 gi|33151987|ref|NP_873340.1| - 3.7e-06 26.5 38.0 1.7e-05 24.3 13.1 2.1 1 1 1 2 2 2 2 Uncharacterised MFS-type transporter YbfB E1-E2_ATPase PF00122.20 gi|33151987|ref|NP_873340.1| - 1.3 8.5 9.0 0.75 9.3 4.5 2.7 2 0 0 2 2 2 0 E1-E2 ATPase FtsL PF04999.13 gi|33151987|ref|NP_873340.1| - 2.2 8.3 3.9 20 5.3 0.6 2.9 2 0 0 2 2 2 0 Cell division protein FtsL Glucosamine_iso PF01182.20 gi|33151988|ref|NP_873341.1| - 4.5e-56 190.2 0.0 5.3e-56 190.0 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase G6PD_C PF02781.16 gi|33151989|ref|NP_873342.1| - 1.5e-117 391.9 0.0 2e-117 391.5 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 gi|33151989|ref|NP_873342.1| - 5.1e-59 199.9 0.0 7.7e-59 199.3 0.0 1.3 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain Inositol_P PF00459.25 gi|33151990|ref|NP_873343.1| - 5.6e-48 163.8 0.0 6.6e-48 163.6 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|33151990|ref|NP_873343.1| - 0.021 14.3 0.0 0.046 13.2 0.0 1.6 2 0 0 2 2 2 0 Fructose-1-6-bisphosphatase, N-terminal domain NUDIX PF00293.28 gi|33151991|ref|NP_873344.1| - 9.4e-12 45.1 0.0 1.2e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain S4 PF01479.25 gi|33151992|ref|NP_873345.1| - 1.3e-13 50.4 0.1 2e-13 49.8 0.1 1.3 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 gi|33151992|ref|NP_873345.1| - 0.013 15.3 0.0 0.033 14.0 0.0 1.7 1 1 1 2 2 2 0 S4 domain HSP33 PF01430.19 gi|33151993|ref|NP_873346.1| - 1.2e-76 257.7 1.3 1.3e-76 257.5 1.3 1.0 1 0 0 1 1 1 1 Hsp33 protein Peptidase_S49_N PF08496.10 gi|33151994|ref|NP_873347.1| - 7e-52 175.6 4.4 7e-52 175.6 4.4 2.6 2 1 0 3 3 3 1 Peptidase family S49 N-terminal Peptidase_S49 PF01343.18 gi|33151994|ref|NP_873347.1| - 3.8e-50 169.8 0.1 9.1e-50 168.6 0.1 1.6 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 gi|33151994|ref|NP_873347.1| - 1.9e-06 27.1 0.1 1.9e-06 27.1 0.1 2.2 2 0 0 2 2 2 1 Serine dehydrogenase proteinase Selenoprotein_S PF06936.11 gi|33151994|ref|NP_873347.1| - 0.036 13.9 4.5 0.085 12.7 1.8 2.2 2 0 0 2 2 2 0 Selenoprotein S (SelS) S1FA PF04689.13 gi|33151994|ref|NP_873347.1| - 0.3 11.3 1.6 0.86 9.8 1.6 1.7 1 0 0 1 1 1 0 DNA binding protein S1FA LpxB PF02684.15 gi|33151995|ref|NP_873348.1| - 2.1e-142 474.4 0.3 2.4e-142 474.2 0.3 1.0 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase Semialdhyde_dhC PF02774.18 gi|33151996|ref|NP_873349.1| - 1.7e-59 201.0 0.0 2.3e-59 200.6 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|33151996|ref|NP_873349.1| - 1.1e-23 83.9 0.0 2e-23 83.1 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Sod_Cu PF00080.20 gi|33151997|ref|NP_873350.1| - 2.4e-32 112.1 0.6 2.4e-32 112.1 0.6 1.3 2 0 0 2 2 2 1 Copper/zinc superoxide dismutase (SODC) Apc13p PF05839.11 gi|33151997|ref|NP_873350.1| - 0.048 13.8 0.1 0.077 13.2 0.1 1.3 1 0 0 1 1 1 0 Apc13p protein SMC_N PF02463.19 gi|33151998|ref|NP_873351.1| - 3.6e-43 147.6 0.0 4.5e-43 147.2 0.0 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|33151998|ref|NP_873351.1| - 4e-13 49.8 0.0 4.5e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|33151998|ref|NP_873351.1| - 1.7e-11 45.0 0.6 2.6e-11 44.4 0.6 1.5 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|33151998|ref|NP_873351.1| - 4.1e-08 33.4 0.1 2.5e-05 24.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 gi|33151998|ref|NP_873351.1| - 1.1e-05 25.1 0.2 0.00011 21.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|33151998|ref|NP_873351.1| - 1.5e-05 24.6 0.5 0.00027 20.6 0.0 2.8 3 0 0 3 3 3 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|33151998|ref|NP_873351.1| - 0.00038 21.0 0.0 0.00094 19.7 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 gi|33151998|ref|NP_873351.1| - 0.0021 18.5 0.4 0.16 12.4 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain PDZ_6 PF17820.1 gi|33151998|ref|NP_873351.1| - 0.0058 16.5 0.0 0.018 14.9 0.0 1.8 1 0 0 1 1 1 1 PDZ domain NACHT PF05729.12 gi|33151998|ref|NP_873351.1| - 0.0076 16.2 0.0 0.41 10.5 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_13 PF13166.6 gi|33151998|ref|NP_873351.1| - 0.018 13.7 0.0 0.025 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|33151998|ref|NP_873351.1| - 0.03 14.2 0.1 0.29 11.0 0.0 2.3 2 1 1 3 3 3 0 RsgA GTPase DUF2813 PF11398.8 gi|33151998|ref|NP_873351.1| - 0.039 13.2 0.3 0.095 11.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) NB-ARC PF00931.22 gi|33151998|ref|NP_873351.1| - 0.064 12.4 0.0 1.8 7.7 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain PDZ PF00595.24 gi|33151998|ref|NP_873351.1| - 0.19 12.1 0.0 0.42 11.0 0.0 1.6 1 0 0 1 1 1 0 PDZ domain DNA_pol3_beta_2 PF02767.16 gi|33151999|ref|NP_873352.1| - 1.2e-44 151.2 0.1 1.7e-38 131.4 0.0 2.8 3 0 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta PF00712.19 gi|33151999|ref|NP_873352.1| - 2.7e-43 146.9 1.6 1.4e-36 125.2 0.0 3.1 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_3 PF02768.15 gi|33151999|ref|NP_873352.1| - 5.8e-43 145.6 2.7 2.1e-42 143.7 0.6 2.6 3 0 0 3 3 3 1 DNA polymerase III beta subunit, C-terminal domain Bac_DnaA PF00308.18 gi|33152000|ref|NP_873353.1| - 8.2e-94 313.5 0.5 1.5e-93 312.6 0.5 1.5 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 gi|33152000|ref|NP_873353.1| - 8.4e-35 118.6 0.4 1.8e-33 114.4 0.3 2.6 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix DnaA_N PF11638.8 gi|33152000|ref|NP_873353.1| - 9.4e-16 57.3 0.3 2.6e-15 55.9 0.3 1.8 1 0 0 1 1 1 1 DnaA N-terminal domain IstB_IS21 PF01695.17 gi|33152000|ref|NP_873353.1| - 1.8e-12 47.3 0.0 3.3e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|33152000|ref|NP_873353.1| - 2.4e-08 34.5 0.0 9.2e-08 32.6 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|33152000|ref|NP_873353.1| - 0.0017 18.7 0.0 0.016 15.6 0.0 2.6 2 0 0 2 2 2 1 RNA helicase ATPase_2 PF01637.18 gi|33152000|ref|NP_873353.1| - 0.0022 18.0 0.4 0.0048 16.8 0.2 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|33152000|ref|NP_873353.1| - 0.0044 17.4 0.0 0.017 15.5 0.0 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|33152000|ref|NP_873353.1| - 0.0046 17.2 1.7 0.44 10.8 0.5 3.3 2 1 0 2 2 2 1 AAA domain KAP_NTPase PF07693.14 gi|33152000|ref|NP_873353.1| - 0.0074 15.6 0.6 0.039 13.2 0.1 2.4 2 1 0 2 2 2 1 KAP family P-loop domain DUF815 PF05673.13 gi|33152000|ref|NP_873353.1| - 0.016 14.4 0.1 0.037 13.2 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF815) DNA_pol3_a_NII PF11490.8 gi|33152000|ref|NP_873353.1| - 0.018 14.9 0.2 0.065 13.1 0.2 2.0 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II AFG1_ATPase PF03969.16 gi|33152000|ref|NP_873353.1| - 0.021 13.7 0.0 0.038 12.9 0.0 1.4 1 0 0 1 1 1 0 AFG1-like ATPase ATP-cone PF03477.16 gi|33152000|ref|NP_873353.1| - 0.044 14.4 1.2 0.21 12.2 0.2 2.6 2 0 0 2 2 2 0 ATP cone domain Fur_reg_FbpB PF13040.6 gi|33152000|ref|NP_873353.1| - 0.059 12.9 1.2 0.78 9.3 0.6 2.6 2 0 0 2 2 2 0 Fur-regulated basic protein B PCI PF01399.27 gi|33152000|ref|NP_873353.1| - 0.21 12.1 3.0 16 6.0 0.2 3.5 3 1 0 3 3 3 0 PCI domain Sulfatase PF00884.23 gi|33152001|ref|NP_873354.1| - 3.4e-52 177.8 0.0 5.2e-52 177.2 0.0 1.2 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 gi|33152001|ref|NP_873354.1| - 2e-42 144.7 12.2 2e-42 144.7 12.2 1.6 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB PCRF PF03462.18 gi|33152002|ref|NP_873355.1| - 3.8e-75 252.0 2.5 4.6e-75 251.7 0.7 1.8 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 gi|33152002|ref|NP_873355.1| - 4.6e-41 139.4 0.3 4.6e-41 139.4 0.3 2.6 3 0 0 3 3 3 1 RF-1 domain ABC_tran_CTD PF16326.5 gi|33152002|ref|NP_873355.1| - 0.00097 19.3 0.4 0.00097 19.3 0.4 3.3 2 1 1 3 3 3 1 ABC transporter C-terminal domain Use1 PF09753.9 gi|33152002|ref|NP_873355.1| - 0.031 14.0 1.8 0.16 11.6 0.1 2.1 2 0 0 2 2 2 0 Membrane fusion protein Use1 Methyltransf_31 PF13847.6 gi|33152003|ref|NP_873356.1| - 6.7e-32 110.4 0.0 9.2e-32 109.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|33152003|ref|NP_873356.1| - 3.7e-19 68.9 0.0 2.6e-18 66.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain PrmC_N PF17827.1 gi|33152003|ref|NP_873356.1| - 2.5e-16 60.0 1.4 2.6e-16 60.0 0.1 1.7 2 0 0 2 2 1 1 PrmC N-terminal domain Methyltransf_25 PF13649.6 gi|33152003|ref|NP_873356.1| - 2.5e-12 47.3 0.0 4.9e-12 46.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|33152003|ref|NP_873356.1| - 1.1e-09 38.2 0.0 1.9e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|33152003|ref|NP_873356.1| - 6.9e-09 35.5 0.1 1.2e-08 34.7 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 gi|33152003|ref|NP_873356.1| - 1.1e-08 35.6 0.0 2.2e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|33152003|ref|NP_873356.1| - 2.1e-07 30.8 0.0 5.3e-07 29.5 0.0 1.7 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Ubie_methyltran PF01209.18 gi|33152003|ref|NP_873356.1| - 8.1e-07 28.6 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|33152003|ref|NP_873356.1| - 2.5e-06 28.1 0.0 4.8e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152003|ref|NP_873356.1| - 5.3e-06 26.4 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|33152003|ref|NP_873356.1| - 2.1e-05 24.3 0.0 4.2e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Lysine methyltransferase PCMT PF01135.19 gi|33152003|ref|NP_873356.1| - 7.2e-05 22.6 0.0 0.0001 22.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 gi|33152003|ref|NP_873356.1| - 0.00014 21.9 0.0 0.0002 21.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|33152003|ref|NP_873356.1| - 0.00025 21.0 0.0 0.00062 19.7 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|33152003|ref|NP_873356.1| - 0.00025 20.7 0.0 0.00041 20.0 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F N6_Mtase PF02384.16 gi|33152003|ref|NP_873356.1| - 0.00096 18.5 0.0 0.0016 17.8 0.0 1.4 1 1 0 1 1 1 1 N-6 DNA Methylase Rsm22 PF09243.10 gi|33152003|ref|NP_873356.1| - 0.0019 17.6 0.0 0.0028 17.0 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 CMAS PF02353.20 gi|33152003|ref|NP_873356.1| - 0.0033 16.8 0.0 0.0061 15.9 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GidB PF02527.15 gi|33152003|ref|NP_873356.1| - 0.0077 15.6 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_3 PF01596.17 gi|33152003|ref|NP_873356.1| - 0.0078 15.4 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_4 PF02390.17 gi|33152003|ref|NP_873356.1| - 0.0085 15.6 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase FtsJ PF01728.19 gi|33152003|ref|NP_873356.1| - 0.01 16.0 0.0 0.015 15.5 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase TRM PF02005.16 gi|33152003|ref|NP_873356.1| - 0.019 14.2 0.0 0.027 13.6 0.0 1.2 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase tRNA_U5-meth_tr PF05958.11 gi|33152003|ref|NP_873356.1| - 0.033 13.2 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Eco57I PF07669.11 gi|33152003|ref|NP_873356.1| - 0.035 14.6 0.0 0.074 13.6 0.0 1.5 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Reovirus_L2 PF06016.11 gi|33152003|ref|NP_873356.1| - 0.059 10.6 0.0 0.077 10.2 0.0 1.1 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) PRMT5 PF05185.16 gi|33152003|ref|NP_873356.1| - 0.12 12.2 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase DOT1 PF08123.13 gi|33152003|ref|NP_873356.1| - 0.13 11.7 0.1 0.37 10.3 0.0 1.7 2 0 0 2 2 2 0 Histone methylation protein DOT1 Transglut_core2 PF13369.6 gi|33152004|ref|NP_873357.1| - 4.6e-38 130.2 0.2 8.8e-38 129.3 0.0 1.5 2 0 0 2 2 2 1 Transglutaminase-like superfamily TPR_9 PF13371.6 gi|33152004|ref|NP_873357.1| - 3.3e-21 75.2 0.0 7.1e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_20 PF14561.6 gi|33152004|ref|NP_873357.1| - 0.071 13.4 0.1 13 6.2 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DAHP_synth_1 PF00793.20 gi|33152005|ref|NP_873358.1| - 4.6e-69 232.3 0.0 5.5e-69 232.1 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family FtsX PF02687.21 gi|33152006|ref|NP_873359.1| - 3.6e-14 53.0 15.2 3.9e-14 52.9 7.7 3.1 3 0 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 gi|33152006|ref|NP_873359.1| - 2.5e-10 41.0 0.2 2.5e-10 41.0 0.2 2.1 2 1 0 2 2 2 1 MacB-like periplasmic core domain DUF2759 PF10958.8 gi|33152006|ref|NP_873359.1| - 0.0084 15.8 0.2 0.045 13.5 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2759) CytB6-F_Fe-S PF08802.10 gi|33152006|ref|NP_873359.1| - 0.081 13.0 0.1 11 6.2 0.0 3.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Bac_export_2 PF01312.19 gi|33152006|ref|NP_873359.1| - 0.2 10.8 3.9 0.091 11.9 1.1 1.8 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family Trp_oprn_chp PF09534.10 gi|33152006|ref|NP_873359.1| - 0.75 9.6 2.6 0.8 9.5 0.4 1.9 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) ABC_tran PF00005.27 gi|33152007|ref|NP_873360.1| - 6.5e-35 120.6 0.0 8.6e-35 120.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33152007|ref|NP_873360.1| - 5e-08 33.1 0.2 0.003 17.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33152007|ref|NP_873360.1| - 4e-06 26.4 1.9 5.5e-05 22.7 1.9 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|33152007|ref|NP_873360.1| - 9.1e-05 22.1 0.5 0.0002 21.0 0.5 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|33152007|ref|NP_873360.1| - 0.00056 19.9 0.2 0.0012 18.8 0.2 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|33152007|ref|NP_873360.1| - 0.00088 19.7 0.5 0.0016 18.8 0.5 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|33152007|ref|NP_873360.1| - 0.0047 17.2 6.0 0.26 11.6 6.0 2.5 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|33152007|ref|NP_873360.1| - 0.0073 16.8 0.1 0.0073 16.8 0.1 2.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|33152007|ref|NP_873360.1| - 0.011 15.9 1.3 0.079 13.1 1.3 2.2 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|33152007|ref|NP_873360.1| - 0.017 15.3 0.0 0.29 11.4 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 gi|33152007|ref|NP_873360.1| - 0.028 14.8 0.3 2.3 8.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|33152007|ref|NP_873360.1| - 0.028 14.1 0.1 2.1 8.1 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|33152007|ref|NP_873360.1| - 0.03 14.5 0.0 0.05 13.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|33152007|ref|NP_873360.1| - 0.052 12.7 0.0 0.068 12.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit Dynamin_N PF00350.23 gi|33152007|ref|NP_873360.1| - 0.056 13.5 0.2 0.092 12.8 0.2 1.6 1 1 0 1 1 1 0 Dynamin family AAA_30 PF13604.6 gi|33152007|ref|NP_873360.1| - 0.066 12.9 1.2 0.34 10.6 1.2 2.0 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|33152007|ref|NP_873360.1| - 0.077 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_25 PF13481.6 gi|33152007|ref|NP_873360.1| - 0.083 12.5 0.8 0.54 9.8 0.5 2.2 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|33152007|ref|NP_873360.1| - 0.11 12.4 3.3 0.37 10.7 0.6 2.2 2 0 0 2 2 2 0 NACHT domain MMR_HSR1 PF01926.23 gi|33152007|ref|NP_873360.1| - 0.14 12.2 1.3 0.28 11.3 0.4 1.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|33152007|ref|NP_873360.1| - 0.28 11.2 1.8 0.35 10.9 0.5 1.7 2 1 0 2 2 2 0 Helicase HerA, central domain MacB_PCD PF12704.7 gi|33152008|ref|NP_873361.1| - 2.1e-10 41.3 0.1 2.1e-10 41.3 0.1 1.9 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|33152008|ref|NP_873361.1| - 9.9e-09 35.6 13.9 1.1e-08 35.4 2.6 3.5 4 0 0 4 4 4 2 FtsX-like permease family ArabFuran-catal PF09206.11 gi|33152008|ref|NP_873361.1| - 0.23 10.7 0.0 0.35 10.1 0.0 1.2 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B, catalytic ABC_tran PF00005.27 gi|33152009|ref|NP_873362.1| - 5.6e-29 101.4 0.0 7.8e-29 100.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|33152009|ref|NP_873362.1| - 0.00028 21.2 1.4 0.01 16.1 1.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33152009|ref|NP_873362.1| - 0.00029 20.5 0.1 0.00062 19.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|33152009|ref|NP_873362.1| - 0.0011 19.6 1.7 0.0013 19.3 1.6 1.5 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|33152009|ref|NP_873362.1| - 0.0013 18.7 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|33152009|ref|NP_873362.1| - 0.0013 18.5 0.8 0.0016 18.2 0.8 1.3 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|33152009|ref|NP_873362.1| - 0.0045 17.0 0.0 0.0066 16.5 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 gi|33152009|ref|NP_873362.1| - 0.018 14.8 0.0 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system NACHT PF05729.12 gi|33152009|ref|NP_873362.1| - 0.032 14.2 0.1 0.056 13.4 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_13 PF13166.6 gi|33152009|ref|NP_873362.1| - 0.034 12.8 0.3 0.071 11.8 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|33152009|ref|NP_873362.1| - 0.037 14.3 0.0 0.39 10.9 0.0 2.1 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|33152009|ref|NP_873362.1| - 0.041 13.3 0.7 0.072 12.5 0.1 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 gi|33152009|ref|NP_873362.1| - 0.042 13.6 0.1 0.067 12.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|33152009|ref|NP_873362.1| - 0.043 13.2 0.0 0.065 12.6 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_10 PF12846.7 gi|33152009|ref|NP_873362.1| - 0.045 12.7 0.0 0.055 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA PF00004.29 gi|33152009|ref|NP_873362.1| - 0.052 14.0 0.1 0.19 12.2 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|33152009|ref|NP_873362.1| - 0.054 13.9 0.0 0.073 13.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 gi|33152009|ref|NP_873362.1| - 0.062 12.7 0.6 1.1 8.6 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_18 PF13238.6 gi|33152009|ref|NP_873362.1| - 0.077 13.5 0.0 0.18 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|33152009|ref|NP_873362.1| - 0.09 12.5 0.1 0.24 11.1 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein ATP-synt_ab PF00006.25 gi|33152009|ref|NP_873362.1| - 0.12 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 gi|33152009|ref|NP_873362.1| - 0.12 12.8 0.0 0.58 10.6 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_27 PF13514.6 gi|33152009|ref|NP_873362.1| - 0.14 11.7 0.1 0.23 11.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain F_bP_aldolase PF01116.20 gi|33152010|ref|NP_873363.1| - 5.6e-89 298.3 0.0 6.2e-89 298.2 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II MR_MLE_C PF13378.6 gi|33152010|ref|NP_873363.1| - 0.14 11.7 0.0 0.44 10.1 0.0 1.9 2 0 0 2 2 2 0 Enolase C-terminal domain-like TatD_DNase PF01026.21 gi|33152010|ref|NP_873363.1| - 0.22 10.9 0.4 1.2 8.5 0.1 2.2 3 1 0 3 3 3 0 TatD related DNase PGK PF00162.19 gi|33152011|ref|NP_873364.1| - 2.4e-132 441.5 0.7 2.7e-132 441.3 0.7 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase GP38 PF05268.11 gi|33152011|ref|NP_873364.1| - 0.052 13.2 0.1 0.089 12.4 0.1 1.3 1 0 0 1 1 1 0 Phage tail fibre adhesin Gp38 CitMHS PF03600.16 gi|33152012|ref|NP_873365.1| - 1.9e-49 168.5 46.0 8.1e-33 113.9 19.2 2.0 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 gi|33152012|ref|NP_873365.1| - 2e-32 112.9 33.8 2.5e-32 112.5 33.8 1.1 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DctM PF06808.12 gi|33152012|ref|NP_873365.1| - 7.7e-07 28.3 19.6 7.7e-07 28.3 19.6 2.9 2 1 0 2 2 2 1 Tripartite ATP-independent periplasmic transporter, DctM component SLATT_6 PF18169.1 gi|33152012|ref|NP_873365.1| - 0.045 13.3 0.2 0.045 13.3 0.2 3.2 4 0 0 4 4 4 0 SMODS and SLOG-associating 2TM effector domain 6 Na_sulph_symp PF00939.19 gi|33152013|ref|NP_873366.1| - 2.1e-05 23.8 3.3 2.1e-05 23.8 3.3 1.9 1 1 1 2 2 2 2 Sodium:sulfate symporter transmembrane region CxC1 PF18802.1 gi|33152013|ref|NP_873366.1| - 0.063 13.4 0.1 0.093 12.9 0.1 1.3 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases DNA_gyraseB PF00204.25 gi|33152015|ref|NP_873368.1| - 3.1e-40 137.5 0.0 8.2e-40 136.1 0.0 1.6 2 0 0 2 2 2 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|33152015|ref|NP_873368.1| - 5.7e-23 80.9 0.3 1.1e-22 79.9 0.3 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|33152015|ref|NP_873368.1| - 2e-17 63.7 0.3 3.8e-17 62.8 0.3 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|33152015|ref|NP_873368.1| - 1.5e-11 44.5 0.0 2.8e-11 43.5 0.0 1.5 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|33152015|ref|NP_873368.1| - 0.0075 16.1 0.5 0.02 14.8 0.5 1.6 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPRIM_C PF16898.5 gi|33152015|ref|NP_873368.1| - 0.051 13.8 0.1 0.13 12.6 0.1 1.6 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM DUF4225 PF13988.6 gi|33152016|ref|NP_873369.1| - 0.17 11.4 1.2 0.18 11.4 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) DUF2628 PF10947.8 gi|33152016|ref|NP_873369.1| - 2.8 8.3 5.4 3.1 8.2 5.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) PDT PF00800.18 gi|33152017|ref|NP_873370.1| - 8.9e-50 169.0 1.4 1.3e-49 168.5 1.4 1.3 1 0 0 1 1 1 1 Prephenate dehydratase CM_2 PF01817.21 gi|33152017|ref|NP_873370.1| - 1.3e-14 54.3 3.3 1.3e-14 54.3 3.3 2.3 2 0 0 2 2 2 1 Chorismate mutase type II ACT PF01842.25 gi|33152017|ref|NP_873370.1| - 0.0022 17.7 0.0 0.0074 16.0 0.0 1.9 1 0 0 1 1 1 1 ACT domain TAN PF11640.8 gi|33152017|ref|NP_873370.1| - 0.067 13.3 0.9 0.32 11.1 0.4 2.2 2 0 0 2 2 2 0 Telomere-length maintenance and DNA damage repair Pyr_redox_2 PF07992.14 gi|33152018|ref|NP_873371.1| - 7.2e-66 222.4 0.7 8.4e-66 222.2 0.7 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|33152018|ref|NP_873371.1| - 1.5e-14 54.3 2.2 2.9e-09 37.3 1.1 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|33152018|ref|NP_873371.1| - 4.9e-05 23.4 0.1 0.36 10.8 0.0 3.1 3 0 0 3 3 3 2 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|33152018|ref|NP_873371.1| - 6.1e-05 21.9 1.0 0.36 9.5 0.0 4.0 4 0 0 4 4 4 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|33152018|ref|NP_873371.1| - 7.6e-05 22.1 4.5 0.015 14.6 1.6 3.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|33152018|ref|NP_873371.1| - 0.00014 21.1 0.2 0.27 10.2 0.0 3.1 2 1 1 3 3 3 2 Lycopene cyclase protein DAO PF01266.24 gi|33152018|ref|NP_873371.1| - 0.00024 20.8 10.1 0.54 9.8 0.3 3.9 2 2 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|33152018|ref|NP_873371.1| - 0.0014 18.9 5.6 0.018 15.3 0.1 3.3 3 1 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|33152018|ref|NP_873371.1| - 0.0052 16.1 0.6 2.2 7.4 0.0 2.7 2 1 0 2 2 2 2 FAD binding domain K_oxygenase PF13434.6 gi|33152018|ref|NP_873371.1| - 0.01 15.0 0.1 1.1 8.3 0.1 2.5 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) TrkA_N PF02254.18 gi|33152018|ref|NP_873371.1| - 0.011 15.9 0.2 5.8 7.2 0.0 2.7 2 0 0 2 2 2 0 TrkA-N domain HemN_C PF06969.16 gi|33152018|ref|NP_873371.1| - 0.047 13.8 0.0 7.6 6.7 0.0 2.5 2 0 0 2 2 2 0 HemN C-terminal domain Thi4 PF01946.17 gi|33152018|ref|NP_873371.1| - 0.094 11.9 0.2 1.6 7.9 0.0 2.5 3 0 0 3 3 3 0 Thi4 family ApbA PF02558.16 gi|33152018|ref|NP_873371.1| - 0.13 11.9 2.8 1.8 8.2 0.1 2.8 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 gi|33152018|ref|NP_873371.1| - 0.49 9.2 2.4 1.6 7.5 0.1 2.5 2 1 1 3 3 3 0 Tryptophan halogenase SprT-like PF10263.9 gi|33152019|ref|NP_873372.1| - 7.7e-17 61.2 0.2 5e-16 58.6 0.0 1.9 1 1 1 2 2 2 1 SprT-like family Zn_ribbon_SprT PF17283.2 gi|33152019|ref|NP_873372.1| - 3.7e-10 39.6 5.1 5.6e-10 39.0 5.1 1.3 1 0 0 1 1 1 1 SprT-like zinc ribbon domain zf-ACC PF17848.1 gi|33152019|ref|NP_873372.1| - 0.0031 17.5 0.5 0.0072 16.4 0.5 1.6 1 0 0 1 1 1 1 Acetyl-coA carboxylase zinc finger domain Metallothio_Pro PF02069.16 gi|33152019|ref|NP_873372.1| - 0.008 16.4 1.2 0.015 15.5 1.2 1.3 1 0 0 1 1 1 1 Prokaryotic metallothionein DUF3267 PF11667.8 gi|33152019|ref|NP_873372.1| - 0.011 16.0 0.6 0.016 15.4 0.6 1.4 1 0 0 1 1 1 0 Putative zincin peptidase DUF45 PF01863.17 gi|33152019|ref|NP_873372.1| - 0.019 15.0 0.1 0.043 13.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF45 DUF3152 PF11350.8 gi|33152019|ref|NP_873372.1| - 0.034 13.9 0.8 0.045 13.5 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3152) Ribonuclease_T2 PF00445.18 gi|33152020|ref|NP_873373.1| - 2.9e-15 57.0 2.5 6.6e-15 55.8 2.5 1.6 1 1 0 1 1 1 1 Ribonuclease T2 family Peptidase_S49 PF01343.18 gi|33152022|ref|NP_873375.1| - 6.8e-80 266.4 1.2 1e-43 149.0 0.1 2.2 2 0 0 2 2 2 2 Peptidase family S49 CLP_protease PF00574.23 gi|33152022|ref|NP_873375.1| - 2.4e-07 30.8 0.9 4.1e-06 26.8 0.4 2.3 2 0 0 2 2 2 1 Clp protease SDH_sah PF01972.16 gi|33152022|ref|NP_873375.1| - 0.0002 20.5 0.0 0.00046 19.3 0.0 1.5 1 0 0 1 1 1 1 Serine dehydrogenase proteinase ECH_1 PF00378.20 gi|33152022|ref|NP_873375.1| - 0.00056 19.3 2.5 0.031 13.6 0.1 4.1 4 1 1 5 5 5 1 Enoyl-CoA hydratase/isomerase Peptidase_S49_N PF08496.10 gi|33152022|ref|NP_873375.1| - 0.003 17.6 0.2 0.023 14.8 0.1 2.2 2 0 0 2 2 2 1 Peptidase family S49 N-terminal STAS PF01740.21 gi|33152022|ref|NP_873375.1| - 0.038 13.6 0.0 0.13 11.9 0.0 1.9 1 0 0 1 1 1 0 STAS domain Nitroreductase PF00881.24 gi|33152023|ref|NP_873376.1| - 1.1e-20 74.3 0.2 1.4e-20 74.0 0.2 1.1 1 0 0 1 1 1 1 Nitroreductase family adh_short PF00106.25 gi|33152024|ref|NP_873377.1| - 1.1e-40 139.2 0.0 1.3e-40 138.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|33152024|ref|NP_873377.1| - 2.3e-30 105.9 0.0 3e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|33152024|ref|NP_873377.1| - 4.7e-12 46.2 0.1 6.5e-12 45.7 0.1 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|33152024|ref|NP_873377.1| - 3.5e-08 33.6 0.0 5e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|33152024|ref|NP_873377.1| - 3.7e-06 26.6 0.0 9.5e-06 25.2 0.0 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 gi|33152024|ref|NP_873377.1| - 0.00065 19.2 0.0 0.00075 18.9 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) NmrA PF05368.13 gi|33152024|ref|NP_873377.1| - 0.0023 17.5 0.0 0.0034 17.0 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family TrkA_N PF02254.18 gi|33152024|ref|NP_873377.1| - 0.0087 16.3 0.0 0.014 15.7 0.0 1.3 1 0 0 1 1 1 1 TrkA-N domain RmlD_sub_bind PF04321.17 gi|33152024|ref|NP_873377.1| - 0.024 13.8 0.0 0.034 13.2 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 gi|33152024|ref|NP_873377.1| - 0.03 13.7 0.0 0.047 13.1 0.0 1.4 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase Baculo_E66 PF04850.12 gi|33152024|ref|NP_873377.1| - 0.033 13.0 0.0 0.046 12.5 0.0 1.1 1 0 0 1 1 1 0 Baculovirus E66 occlusion-derived virus envelope protein DUF218 PF02698.17 gi|33152025|ref|NP_873378.1| - 4.8e-24 84.8 0.0 5.9e-24 84.6 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain Polysacc_synt PF01943.17 gi|33152026|ref|NP_873379.1| - 2.2e-12 47.0 27.5 2.2e-12 47.0 27.5 2.7 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|33152026|ref|NP_873379.1| - 5.2e-07 29.2 16.4 5.2e-07 29.2 16.4 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Glyco_transf_25 PF01755.17 gi|33152027|ref|NP_873380.1| - 1.6e-36 126.0 0.1 2.2e-36 125.6 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Glycos_transf_2 PF00535.26 gi|33152029|ref|NP_873382.1| - 5.8e-27 94.6 0.1 8.5e-27 94.0 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|33152029|ref|NP_873382.1| - 1.2e-14 54.8 0.1 1.7e-14 54.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|33152029|ref|NP_873382.1| - 6.6e-10 38.9 2.9 3.1e-09 36.7 1.0 2.5 1 1 0 2 2 2 1 Glycosyltransferase like family 2 DUF3922 PF13059.6 gi|33152029|ref|NP_873382.1| - 0.05 14.0 0.5 11 6.6 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3992) Glycos_transf_2 PF00535.26 gi|33152030|ref|NP_873383.1| - 4.8e-24 85.1 0.0 9.5e-24 84.1 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|33152030|ref|NP_873383.1| - 1.3e-12 48.1 0.1 2.2e-12 47.3 0.1 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|33152030|ref|NP_873383.1| - 1.8e-05 24.4 0.0 3.3e-05 23.5 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|33152030|ref|NP_873383.1| - 0.0084 16.0 0.7 0.013 15.4 0.7 1.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Kelch_1 PF01344.25 gi|33152030|ref|NP_873383.1| - 0.097 12.3 0.1 3.8 7.2 0.0 2.9 3 0 0 3 3 3 0 Kelch motif Nucleos_tra2_C PF07662.13 gi|33152031|ref|NP_873384.1| - 2.3e-75 253.0 9.4 2.3e-75 253.0 9.4 2.1 2 0 0 2 2 2 1 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_N PF01773.20 gi|33152031|ref|NP_873384.1| - 2.7e-23 82.4 5.9 2.7e-23 82.4 5.9 3.4 3 0 0 3 3 3 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 gi|33152031|ref|NP_873384.1| - 1e-08 35.5 5.7 1e-08 35.5 5.7 3.4 2 1 0 2 2 2 1 Nucleoside recognition DeoC PF01791.9 gi|33152032|ref|NP_873385.1| - 4.7e-41 140.9 2.9 5.4e-41 140.7 2.9 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase His_biosynth PF00977.21 gi|33152032|ref|NP_873385.1| - 0.01 15.3 0.2 0.081 12.4 0.1 2.0 1 1 1 2 2 2 0 Histidine biosynthesis protein FlhD PF05247.13 gi|33152032|ref|NP_873385.1| - 0.08 13.2 0.1 0.2 11.9 0.0 1.7 2 0 0 2 2 2 0 Flagellar transcriptional activator (FlhD) HMGL-like PF00682.19 gi|33152032|ref|NP_873385.1| - 0.082 12.4 2.2 0.76 9.3 0.2 2.3 1 1 0 2 2 2 0 HMGL-like PNP_UDP_1 PF01048.20 gi|33152033|ref|NP_873386.1| - 7e-40 136.7 0.7 8e-40 136.5 0.7 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily YidD PF01809.18 gi|33152033|ref|NP_873386.1| - 0.034 14.0 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor Lipase_2 PF01674.18 gi|33152033|ref|NP_873386.1| - 0.072 12.6 0.0 0.13 11.8 0.0 1.4 1 1 0 1 1 1 0 Lipase (class 2) AF2331-like PF14556.6 gi|33152033|ref|NP_873386.1| - 0.078 13.6 0.2 0.16 12.6 0.2 1.4 1 0 0 1 1 1 0 AF2331-like Semialdhyde_dh PF01118.24 gi|33152034|ref|NP_873387.1| - 7.7e-07 29.6 0.0 1.5e-05 25.4 0.0 2.5 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DUF2895 PF11444.8 gi|33152034|ref|NP_873387.1| - 0.12 11.8 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) AA_kinase PF00696.28 gi|33152035|ref|NP_873388.1| - 9.2e-40 136.7 6.6 1.1e-39 136.5 6.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family Aminotran_3 PF00202.21 gi|33152036|ref|NP_873389.1| - 1.5e-111 372.9 0.2 1.8e-111 372.7 0.2 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Rho_RNA_bind PF07497.12 gi|33152037|ref|NP_873390.1| - 3.8e-32 110.0 0.0 8.1e-32 108.9 0.0 1.6 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain ATP-synt_ab PF00006.25 gi|33152037|ref|NP_873390.1| - 7.9e-23 81.2 0.1 1.1e-22 80.7 0.1 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain Rho_N PF07498.12 gi|33152037|ref|NP_873390.1| - 3.3e-17 62.1 0.7 8e-17 60.9 0.7 1.7 1 0 0 1 1 1 1 Rho termination factor, N-terminal domain OB_RNB PF08206.11 gi|33152037|ref|NP_873390.1| - 0.0013 18.4 0.0 0.0029 17.2 0.0 1.6 1 0 0 1 1 1 1 Ribonuclease B OB domain NACHT PF05729.12 gi|33152037|ref|NP_873390.1| - 0.0015 18.5 0.0 0.0027 17.6 0.0 1.3 1 0 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 gi|33152037|ref|NP_873390.1| - 0.0045 17.3 0.0 0.011 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|33152037|ref|NP_873390.1| - 0.0061 17.0 0.0 0.015 15.7 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|33152037|ref|NP_873390.1| - 0.0091 15.6 0.1 0.032 13.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain PALP PF00291.25 gi|33152038|ref|NP_873391.1| - 1.9e-66 224.5 0.4 2.4e-66 224.2 0.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PG_isomerase_N PF18353.1 gi|33152038|ref|NP_873391.1| - 0.0089 16.4 0.2 0.5 10.8 0.2 2.4 1 1 0 1 1 1 1 Phosphoglucose isomerase N-terminal domain DFP PF04127.15 gi|33152038|ref|NP_873391.1| - 0.018 14.9 0.1 0.041 13.7 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein Phage_integrase PF00589.22 gi|33152039|ref|NP_873392.1| - 7e-24 84.5 0.0 1.2e-23 83.7 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_5 PF13102.6 gi|33152039|ref|NP_873392.1| - 0.00028 21.2 2.3 0.00035 20.8 0.6 2.0 2 1 0 2 2 2 1 Phage integrase SAM-like domain Phage_int_SAM_4 PF13495.6 gi|33152039|ref|NP_873392.1| - 0.0048 17.3 1.8 0.0089 16.5 0.2 2.0 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain NS3_envE PF02723.14 gi|33152039|ref|NP_873392.1| - 0.079 13.0 0.1 0.19 11.8 0.1 1.6 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF997 PF06196.12 gi|33152039|ref|NP_873392.1| - 0.085 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF997) TraI_2_C PF07515.11 gi|33152040|ref|NP_873393.1| - 5.8e-41 139.2 0.1 9.1e-41 138.6 0.1 1.3 1 0 0 1 1 1 1 Putative conjugal transfer nickase/helicase TraI C-term TraI_2 PF07514.11 gi|33152041|ref|NP_873394.1| - 3.4e-32 111.7 0.0 3.8e-32 111.5 0.0 1.0 1 0 0 1 1 1 1 Putative helicase PreAtp-grasp PF18604.1 gi|33152041|ref|NP_873394.1| - 0.16 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Pre ATP-grasp domain TraI_2 PF07514.11 gi|33152042|ref|NP_873395.1| - 3.1e-72 243.3 0.1 3.6e-72 243.1 0.1 1.0 1 0 0 1 1 1 1 Putative helicase HD_6 PF18019.1 gi|33152042|ref|NP_873395.1| - 0.044 13.9 0.1 0.078 13.1 0.1 1.5 1 1 0 1 1 1 0 HD domain DUF2724 PF10893.8 gi|33152042|ref|NP_873395.1| - 0.097 12.5 0.9 0.46 10.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2724) End3 PF12761.7 gi|33152043|ref|NP_873396.1| - 0.016 15.4 1.1 0.017 15.3 1.1 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 DUF1690 PF07956.11 gi|33152043|ref|NP_873396.1| - 0.051 14.0 1.3 0.059 13.8 1.3 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) ParD_antitoxin PF03693.14 gi|33152043|ref|NP_873396.1| - 0.11 12.9 0.1 0.36 11.3 0.1 1.8 1 1 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DUF3364 PF11844.8 gi|33152043|ref|NP_873396.1| - 0.11 12.8 0.4 0.11 12.8 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3364) CDtoxinA PF03498.14 gi|33152044|ref|NP_873397.1| - 8.2e-49 165.0 0.0 1.1e-48 164.7 0.0 1.1 1 0 0 1 1 1 1 Cytolethal distending toxin A/C domain RicinB_lectin_2 PF14200.6 gi|33152044|ref|NP_873397.1| - 4.7e-05 24.0 0.0 0.006 17.3 0.0 2.2 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like Exo_endo_phos PF03372.23 gi|33152045|ref|NP_873398.1| - 1.8e-14 53.9 0.1 2.2e-14 53.6 0.1 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family CDtoxinA PF03498.14 gi|33152046|ref|NP_873399.1| - 1.7e-35 121.8 0.0 2e-35 121.6 0.0 1.1 1 0 0 1 1 1 1 Cytolethal distending toxin A/C domain IstB_IS21 PF01695.17 gi|33152047|ref|NP_873400.1| - 2.2e-27 95.9 0.2 2.5e-27 95.8 0.2 1.0 1 0 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 gi|33152047|ref|NP_873400.1| - 0.012 15.5 0.1 0.012 15.4 0.1 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein DUF1690 PF07956.11 gi|33152048|ref|NP_873401.1| - 0.04 14.3 0.9 0.042 14.3 0.9 1.0 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) HemY_N PF07219.13 gi|33152048|ref|NP_873401.1| - 0.1 12.8 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Abi_2 PF07751.11 gi|33152049|ref|NP_873402.1| - 1.5e-07 31.8 0.5 2e-07 31.5 0.5 1.1 1 0 0 1 1 1 1 Abi-like protein Resolvase PF00239.21 gi|33152050|ref|NP_873403.1| - 1.3e-33 116.1 0.1 1.7e-33 115.8 0.1 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_23 PF13384.6 gi|33152050|ref|NP_873403.1| - 5e-06 26.2 0.1 2.9e-05 23.7 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_7 PF02796.15 gi|33152050|ref|NP_873403.1| - 0.00013 22.0 0.1 0.00029 20.9 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 gi|33152050|ref|NP_873403.1| - 0.0029 17.6 0.1 0.097 12.7 0.0 2.5 1 1 1 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|33152050|ref|NP_873403.1| - 0.0032 17.6 0.0 0.07 13.3 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain PAX PF00292.18 gi|33152050|ref|NP_873403.1| - 0.0081 16.1 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 'Paired box' domain HTH_17 PF12728.7 gi|33152050|ref|NP_873403.1| - 0.009 16.2 1.5 3.2 8.0 0.3 2.7 3 0 0 3 3 3 2 Helix-turn-helix domain CENP-B_N PF04218.13 gi|33152050|ref|NP_873403.1| - 0.037 13.7 0.1 0.072 12.7 0.1 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain TnsD PF15978.5 gi|33152050|ref|NP_873403.1| - 0.052 12.5 0.2 0.068 12.1 0.2 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D DAPDH_C PF16654.5 gi|33152050|ref|NP_873403.1| - 0.15 11.9 0.0 1.6 8.6 0.0 2.0 2 0 0 2 2 2 0 Diaminopimelic acid dehydrogenase C-terminal domain DUF3213 PF11491.8 gi|33152051|ref|NP_873404.1| - 0.028 14.6 3.3 0.076 13.2 0.2 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3213) HicB PF05534.12 gi|33152052|ref|NP_873405.1| - 1.6e-22 79.1 0.0 2.8e-22 78.3 0.0 1.4 1 0 0 1 1 1 1 HicB family HicA_toxin PF07927.12 gi|33152053|ref|NP_873406.1| - 2.4e-11 43.5 0.0 3.3e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, G-patch_2 PF12656.7 gi|33152053|ref|NP_873406.1| - 0.092 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 G-patch domain AAA_28 PF13521.6 gi|33152054|ref|NP_873407.1| - 0.00036 20.8 0.0 0.00049 20.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|33152054|ref|NP_873407.1| - 0.0015 18.4 0.1 0.0033 17.3 0.1 1.6 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|33152054|ref|NP_873407.1| - 0.007 16.9 0.1 0.0091 16.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152054|ref|NP_873407.1| - 0.012 16.0 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|33152054|ref|NP_873407.1| - 0.015 15.5 0.0 0.02 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|33152054|ref|NP_873407.1| - 0.042 14.0 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|33152054|ref|NP_873407.1| - 0.048 13.7 0.3 0.36 10.9 0.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|33152054|ref|NP_873407.1| - 0.066 13.0 0.0 0.29 10.9 0.0 1.9 2 0 0 2 2 2 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|33152054|ref|NP_873407.1| - 0.088 12.7 0.1 0.39 10.6 0.0 1.9 1 1 1 2 2 2 0 RsgA GTPase Zeta_toxin PF06414.12 gi|33152054|ref|NP_873407.1| - 0.1 11.9 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin MMR_HSR1 PF01926.23 gi|33152054|ref|NP_873407.1| - 0.1 12.7 0.1 0.25 11.4 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|33152054|ref|NP_873407.1| - 0.14 12.7 0.1 0.25 11.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain HTH_19 PF12844.7 gi|33152055|ref|NP_873408.1| - 0.00018 21.5 0.0 0.00039 20.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|33152055|ref|NP_873408.1| - 0.00049 20.1 0.0 0.0012 18.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix Ribosomal_L6e PF01159.19 gi|33152055|ref|NP_873408.1| - 0.24 12.0 1.6 5.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L6e N6_Mtase PF02384.16 gi|33152056|ref|NP_873409.1| - 3.3e-11 43.0 0.4 7.7e-11 41.8 0.4 1.6 1 1 0 1 1 1 1 N-6 DNA Methylase DUF1281_C PF18406.1 gi|33152057|ref|NP_873410.1| - 1.4e-11 43.9 1.3 2.5e-11 43.1 1.3 1.4 1 0 0 1 1 1 1 Ferredoxin-like domain in Api92-like protein GrpB PF04229.14 gi|33152057|ref|NP_873410.1| - 0.028 14.6 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 GrpB protein MPTase-PolyVal PF18818.1 gi|33152058|ref|NP_873411.1| - 6.6e-44 149.0 0.0 9.5e-44 148.5 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase superfamily domain DUF1738 PF08401.11 gi|33152058|ref|NP_873411.1| - 2.9e-37 127.6 0.0 4.6e-37 127.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1738) DNAPolymera_Pol PF11590.8 gi|33152060|ref|NP_873413.1| - 0.058 13.3 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol DUF1525 PF07511.11 gi|33152061|ref|NP_873414.1| - 5.4e-13 49.1 0.0 6e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1525) TraU PF06834.11 gi|33152062|ref|NP_873415.1| - 2.7e-48 164.8 1.3 3e-48 164.7 1.3 1.0 1 0 0 1 1 1 1 TraU protein Glucosaminidase PF01832.20 gi|33152063|ref|NP_873416.1| - 1.1e-18 67.5 0.5 2.2e-18 66.5 0.5 1.6 1 0 0 1 1 1 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SLT_2 PF13406.6 gi|33152063|ref|NP_873416.1| - 0.0013 18.0 0.1 0.0026 17.0 0.1 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain Ribosomal_L12_N PF16320.5 gi|33152063|ref|NP_873416.1| - 0.082 12.6 0.5 0.24 11.2 0.5 1.8 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain Orthopox_B11R PF07033.11 gi|33152063|ref|NP_873416.1| - 0.14 12.0 1.1 0.52 10.1 1.1 2.1 1 0 0 1 1 1 0 Orthopoxvirus B11R protein DUF1640 PF07798.11 gi|33152063|ref|NP_873416.1| - 0.98 9.4 9.2 1.8 8.6 5.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) TraG_N PF07916.11 gi|33152067|ref|NP_873420.1| - 8.1e-27 94.2 10.5 9.1e-27 94.0 10.5 1.0 1 0 0 1 1 1 1 TraG-like protein, N-terminal region Corona_NS3b PF03053.14 gi|33152067|ref|NP_873420.1| - 0.61 9.8 8.7 3.2 7.5 8.7 1.8 1 1 0 1 1 1 0 ORF3b coronavirus protein FA_hydroxylase PF04116.13 gi|33152067|ref|NP_873420.1| - 0.86 9.9 5.6 1.5 9.1 0.0 2.1 1 1 1 2 2 2 0 Fatty acid hydroxylase superfamily Bac_globin PF01152.21 gi|33152068|ref|NP_873421.1| - 0.048 13.8 0.0 0.049 13.8 0.0 1.0 1 0 0 1 1 1 0 Bacterial-like globin TraG_N PF07916.11 gi|33152069|ref|NP_873422.1| - 1.6e-27 96.5 0.0 1.9e-27 96.3 0.0 1.0 1 0 0 1 1 1 1 TraG-like protein, N-terminal region ATP-synt_I PF03899.15 gi|33152069|ref|NP_873422.1| - 0.037 14.4 0.4 0.058 13.8 0.4 1.3 1 0 0 1 1 1 0 ATP synthase I chain DUF2723 PF11028.8 gi|33152070|ref|NP_873423.1| - 0.0032 17.4 1.1 0.0038 17.2 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2723) TraC_F_IV PF11130.8 gi|33152073|ref|NP_873426.1| - 2.6e-70 236.7 0.3 2.4e-69 233.6 0.0 2.4 2 1 0 2 2 2 1 F pilus assembly Type-IV secretion system for plasmid transfer FtsK_SpoIIIE PF01580.18 gi|33152073|ref|NP_873426.1| - 0.00072 19.0 0.0 0.002 17.5 0.0 1.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family T2SSE PF00437.20 gi|33152073|ref|NP_873426.1| - 0.01 14.9 0.7 0.095 11.7 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_29 PF13555.6 gi|33152073|ref|NP_873426.1| - 0.021 14.6 0.0 0.046 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_10 PF12846.7 gi|33152073|ref|NP_873426.1| - 0.024 13.6 0.0 0.043 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain DUF4286 PF14114.6 gi|33152073|ref|NP_873426.1| - 0.045 14.2 0.5 0.56 10.7 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4286) DUF87 PF01935.17 gi|33152073|ref|NP_873426.1| - 0.092 12.8 1.6 0.34 11.0 1.6 2.0 1 1 0 1 1 1 0 Helicase HerA, central domain FliL PF03748.14 gi|33152073|ref|NP_873426.1| - 0.18 12.4 1.0 0.51 10.9 1.0 1.7 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL RRN3 PF05327.11 gi|33152073|ref|NP_873426.1| - 0.93 8.0 2.5 1.7 7.1 2.5 1.3 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 AAA_23 PF13476.6 gi|33152073|ref|NP_873426.1| - 6.1 7.3 5.3 23 5.4 5.3 2.0 1 1 0 1 1 1 0 AAA domain TrbI PF03743.14 gi|33152075|ref|NP_873428.1| - 3.2e-06 27.1 2.1 7e-06 26.0 0.3 2.1 2 0 0 2 2 2 1 Bacterial conjugation TrbI-like protein Seryl_tRNA_N PF02403.22 gi|33152075|ref|NP_873428.1| - 0.0063 16.7 5.6 0.011 15.9 5.6 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF3450 PF11932.8 gi|33152075|ref|NP_873428.1| - 0.076 12.3 6.1 0.11 11.8 6.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Yuri_gagarin PF15934.5 gi|33152075|ref|NP_873428.1| - 0.12 12.2 2.1 0.17 11.7 2.1 1.1 1 0 0 1 1 1 0 Yuri gagarin TK PF00265.18 gi|33152075|ref|NP_873428.1| - 0.2 11.5 0.6 0.32 10.9 0.6 1.2 1 0 0 1 1 1 0 Thymidine kinase DUF465 PF04325.13 gi|33152075|ref|NP_873428.1| - 0.21 11.6 1.1 0.38 10.8 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF465) DUF3438 PF11920.8 gi|33152076|ref|NP_873429.1| - 2.5e-111 371.6 0.1 3.3e-111 371.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3438) DUF2895 PF11444.8 gi|33152077|ref|NP_873430.1| - 1.2e-65 220.6 0.0 1.5e-65 220.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2895) DUF3487 PF11990.8 gi|33152078|ref|NP_873431.1| - 2.5e-40 136.9 0.8 2.9e-40 136.7 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3487) PrgI PF12666.7 gi|33152078|ref|NP_873431.1| - 0.00092 19.9 1.0 0.0014 19.3 1.0 1.3 1 0 0 1 1 1 1 PrgI family protein TraL PF07178.11 gi|33152078|ref|NP_873431.1| - 0.0078 16.7 4.0 0.76 10.3 1.5 2.2 1 1 1 2 2 2 2 TraL protein DUF2207 PF09972.9 gi|33152078|ref|NP_873431.1| - 0.032 13.0 4.4 0.039 12.7 4.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MgtE PF01769.16 gi|33152078|ref|NP_873431.1| - 0.062 13.7 3.5 0.079 13.3 3.5 1.1 1 0 0 1 1 1 0 Divalent cation transporter Phage_holin_2_2 PF10746.9 gi|33152078|ref|NP_873431.1| - 0.14 11.9 2.8 0.19 11.4 0.3 2.0 1 1 1 2 2 2 0 Phage holin T7 family, holin superfamily II Phage_holin_3_6 PF07332.11 gi|33152078|ref|NP_873431.1| - 0.26 11.3 4.8 0.33 11.0 4.8 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ABC_export PF16962.5 gi|33152078|ref|NP_873431.1| - 0.33 9.3 6.7 0.39 9.1 6.7 1.0 1 0 0 1 1 1 0 Putative ABC exporter DUF2976 PF11190.8 gi|33152079|ref|NP_873432.1| - 5.9e-24 83.7 1.5 7.9e-24 83.3 1.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2976) DUF4282 PF14110.6 gi|33152079|ref|NP_873432.1| - 0.0014 19.4 2.2 0.0027 18.4 2.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) Pox_EPC_I2-L1 PF12575.8 gi|33152079|ref|NP_873432.1| - 0.047 13.9 0.4 0.11 12.7 0.1 1.8 1 1 1 2 2 2 0 Poxvirus entry protein complex L1 and I2 HemY_N PF07219.13 gi|33152079|ref|NP_873432.1| - 0.12 12.5 4.4 4.7 7.5 0.0 2.2 2 0 0 2 2 2 0 HemY protein N-terminus Insulin_TMD PF17870.1 gi|33152079|ref|NP_873432.1| - 4.2 7.5 9.0 7.5 6.7 0.4 2.3 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Plasmid_RAQPRD PF09686.10 gi|33152080|ref|NP_873433.1| - 2.7e-26 91.6 3.8 3.1e-26 91.4 3.8 1.1 1 0 0 1 1 1 1 Plasmid protein of unknown function (Plasmid_RAQPRD) PilJ PF13675.6 gi|33152080|ref|NP_873433.1| - 0.0025 17.8 0.4 0.0032 17.5 0.4 1.1 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term FKBP_N PF01346.18 gi|33152080|ref|NP_873433.1| - 0.048 14.6 1.7 0.062 14.3 1.7 1.1 1 0 0 1 1 1 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RSS_P20 PF11757.8 gi|33152080|ref|NP_873433.1| - 0.049 14.1 0.0 0.071 13.6 0.0 1.3 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain DUF3987 PF13148.6 gi|33152080|ref|NP_873433.1| - 0.055 12.5 1.6 0.065 12.2 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DUF4400 PF14348.6 gi|33152081|ref|NP_873434.1| - 1.5e-63 214.0 6.0 3.1e-63 213.0 6.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4400) AbrB PF05145.12 gi|33152081|ref|NP_873434.1| - 0.88 8.5 9.2 1.7 7.5 0.6 2.7 3 0 0 3 3 3 0 Transition state regulatory protein AbrB DUF4229 PF14012.6 gi|33152081|ref|NP_873434.1| - 9.5 6.4 11.2 16 5.7 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF4229) Cnd2 PF05786.14 gi|33152083|ref|NP_873436.1| - 0.11 11.2 4.6 0.12 11.0 4.6 1.0 1 0 0 1 1 1 0 Condensin complex subunit 2 NOA36 PF06524.12 gi|33152083|ref|NP_873436.1| - 8 5.7 6.9 8.4 5.6 6.9 1.0 1 0 0 1 1 1 0 NOA36 protein Metal_hydrol PF10118.9 gi|33152084|ref|NP_873437.1| - 0.13 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Predicted metal-dependent hydrolase RadC PF04002.15 gi|33152085|ref|NP_873438.1| - 4.1e-42 143.0 0.0 6.1e-42 142.4 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 gi|33152085|ref|NP_873438.1| - 0.00015 21.5 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain Glyco_hydro_38N PF01074.22 gi|33152086|ref|NP_873439.1| - 0.019 14.4 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 N-terminal domain Adeno_Penton_B PF01686.17 gi|33152086|ref|NP_873439.1| - 0.043 12.3 0.0 0.052 12.0 0.0 1.1 1 0 0 1 1 1 0 Adenovirus penton base protein DUF3577 PF12101.8 gi|33152090|ref|NP_873443.1| - 1.1e-55 187.1 0.1 1.3e-55 186.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3577) Topoisom_bac PF01131.20 gi|33152093|ref|NP_873446.1| - 6.2e-78 262.6 0.0 8.9e-78 262.1 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|33152093|ref|NP_873446.1| - 5e-18 65.2 0.0 1.3e-17 63.9 0.0 1.7 1 0 0 1 1 1 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|33152093|ref|NP_873446.1| - 2.8e-10 39.8 0.3 5.4e-10 38.9 0.3 1.5 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger Toprim_4 PF13662.6 gi|33152093|ref|NP_873446.1| - 1.6e-05 25.3 0.2 9.4e-05 22.8 0.1 2.1 2 0 0 2 2 2 1 Toprim domain FYRC PF05965.14 gi|33152093|ref|NP_873446.1| - 0.015 15.5 0.1 0.039 14.1 0.1 1.7 1 1 0 1 1 1 0 F/Y rich C-terminus DUF229 PF02995.17 gi|33152093|ref|NP_873446.1| - 0.02 13.6 0.0 0.033 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF229) Toprim_2 PF13155.6 gi|33152093|ref|NP_873446.1| - 0.064 13.7 0.0 0.16 12.4 0.0 1.6 1 0 0 1 1 1 0 Toprim-like DUF2624 PF11116.8 gi|33152094|ref|NP_873447.1| - 0.016 16.1 0.8 0.045 14.6 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2624) DUF4636 PF15468.6 gi|33152095|ref|NP_873448.1| - 0.0059 16.3 0.3 0.011 15.5 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4636) Meiotic_rec114 PF03525.14 gi|33152097|ref|NP_873450.1| - 0.016 14.2 0.1 0.017 14.1 0.1 1.1 1 0 0 1 1 1 0 Meiotic recombination protein rec114 PEX-1N PF09262.11 gi|33152097|ref|NP_873450.1| - 0.12 12.8 0.1 0.15 12.5 0.1 1.2 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal DUF551 PF04448.12 gi|33152099|ref|NP_873452.1| - 2.3e-17 63.7 1.5 4e-17 62.9 0.3 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF551) Glyco_hydro_9 PF00759.19 gi|33152099|ref|NP_873452.1| - 0.1 12.0 0.1 2.4 7.5 0.0 2.0 1 1 0 2 2 2 0 Glycosyl hydrolase family 9 LPAM_1 PF08139.12 gi|33152100|ref|NP_873453.1| - 0.00098 19.5 1.5 0.0015 18.9 1.5 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site SSB PF00436.25 gi|33152101|ref|NP_873454.1| - 1.7e-35 121.1 0.1 2.3e-35 120.8 0.1 1.1 1 0 0 1 1 1 1 Single-strand binding protein family DUF3158 PF11358.8 gi|33152103|ref|NP_873456.1| - 1.4e-10 41.1 2.4 1.5e-10 41.0 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3158) Titin_Ig-rpts PF06582.12 gi|33152103|ref|NP_873456.1| - 0.027 14.4 0.1 0.042 13.8 0.1 1.3 1 0 0 1 1 1 0 Titin repeat DUF1845 PF08900.11 gi|33152105|ref|NP_873458.1| - 7.6e-78 261.1 0.2 8.9e-78 260.9 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1845) RP-C_C PF11800.8 gi|33152106|ref|NP_873459.1| - 0.00071 19.7 0.1 0.0013 18.9 0.0 1.5 1 1 1 2 2 2 1 Replication protein C C-terminal region FAM76 PF16046.5 gi|33152107|ref|NP_873460.1| - 0.025 14.0 2.7 0.03 13.7 2.7 1.1 1 0 0 1 1 1 0 FAM76 protein DUF2857 PF11198.8 gi|33152108|ref|NP_873461.1| - 4.8e-62 208.8 2.0 5.4e-62 208.7 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2857) FlhD PF05247.13 gi|33152108|ref|NP_873461.1| - 0.008 16.4 0.2 0.013 15.7 0.2 1.4 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhD) Peptidase_M24_C PF16188.5 gi|33152108|ref|NP_873461.1| - 0.066 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 DnaB_C PF03796.15 gi|33152112|ref|NP_873465.1| - 1.9e-84 283.0 0.0 2.8e-84 282.5 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 gi|33152112|ref|NP_873465.1| - 1.5e-29 102.1 0.1 8.4e-29 99.7 0.0 2.3 2 0 0 2 2 2 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 gi|33152112|ref|NP_873465.1| - 1.3e-07 31.4 0.0 2.3e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|33152112|ref|NP_873465.1| - 0.00029 20.3 0.3 0.0012 18.3 0.0 2.1 1 1 1 2 2 2 1 KaiC AAA_22 PF13401.6 gi|33152112|ref|NP_873465.1| - 0.01 16.1 0.0 0.031 14.6 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|33152112|ref|NP_873465.1| - 0.05 14.0 0.0 0.15 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain AAA_3 PF07726.11 gi|33152112|ref|NP_873465.1| - 0.12 12.3 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_31 PF13614.6 gi|33152113|ref|NP_873466.1| - 1.4e-21 77.2 0.1 2.1e-21 76.7 0.1 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|33152113|ref|NP_873466.1| - 2.9e-13 50.0 0.0 4.5e-13 49.4 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|33152113|ref|NP_873466.1| - 4e-07 29.5 0.0 4.9e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|33152113|ref|NP_873466.1| - 1.8e-06 27.5 0.3 4.2e-05 23.0 0.3 2.1 1 1 0 1 1 1 1 ATPase MipZ ParA PF10609.9 gi|33152113|ref|NP_873466.1| - 0.0036 16.8 0.2 0.0067 15.9 0.2 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase TRCF PF03461.15 gi|33152114|ref|NP_873467.1| - 6.8e-28 96.9 3.7 1.8e-27 95.5 0.0 3.6 5 0 0 5 5 5 1 TRCF domain CarD_CdnL_TRCF PF02559.16 gi|33152114|ref|NP_873467.1| - 9.8e-25 87.1 0.1 5e-24 84.8 0.1 2.4 2 0 0 2 2 2 1 CarD-like/TRCF domain DEAD PF00270.29 gi|33152114|ref|NP_873467.1| - 1.1e-21 77.3 1.3 1e-20 74.2 0.7 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase UvrB_inter PF17757.1 gi|33152114|ref|NP_873467.1| - 5.6e-20 71.3 0.0 1.8e-19 69.7 0.0 2.0 1 0 0 1 1 1 1 UvrB interaction domain Helicase_C PF00271.31 gi|33152114|ref|NP_873467.1| - 1.6e-18 67.1 2.0 5.2e-15 55.8 0.3 3.1 2 0 0 2 2 2 2 Helicase conserved C-terminal domain ResIII PF04851.15 gi|33152114|ref|NP_873467.1| - 1.9e-13 50.8 0.7 4e-13 49.7 0.7 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|33152114|ref|NP_873467.1| - 0.00031 19.6 0.0 0.00058 18.7 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain UB2H PF14814.6 gi|33152114|ref|NP_873467.1| - 0.00044 20.2 0.4 0.0034 17.4 0.0 2.7 3 0 0 3 3 3 1 Bifunctional transglycosylase second domain ERCC3_RAD25_C PF16203.5 gi|33152114|ref|NP_873467.1| - 0.00088 18.6 0.0 0.0019 17.5 0.0 1.5 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 gi|33152114|ref|NP_873467.1| - 0.0015 18.8 0.1 0.0059 16.9 0.1 2.0 1 0 0 1 1 1 1 AAA domain DUF3458_C PF17432.2 gi|33152115|ref|NP_873468.1| - 5.6e-110 367.7 11.1 8.1e-110 367.1 11.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 gi|33152115|ref|NP_873468.1| - 2e-56 191.0 0.7 4.2e-56 190.0 0.7 1.6 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 gi|33152115|ref|NP_873468.1| - 6.7e-29 100.2 0.0 1.9e-28 98.8 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 gi|33152115|ref|NP_873468.1| - 2.2e-18 67.1 0.0 4.5e-18 66.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Peptidase_M61 PF05299.12 gi|33152115|ref|NP_873468.1| - 0.041 14.3 0.0 0.16 12.4 0.0 2.1 1 0 0 1 1 1 0 M61 glycyl aminopeptidase G3P_acyltransf PF02660.15 gi|33152116|ref|NP_873469.1| - 5.4e-51 172.9 7.6 6.2e-51 172.7 7.6 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase DUF4386 PF14329.6 gi|33152116|ref|NP_873469.1| - 7.6e-05 22.7 6.0 7.6e-05 22.7 6.0 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF4386) FolB PF02152.18 gi|33152117|ref|NP_873470.1| - 2.5e-30 105.3 0.6 2.8e-30 105.1 0.6 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase tRNA-synt_1e PF01406.19 gi|33152117|ref|NP_873470.1| - 0.055 12.8 0.1 0.065 12.6 0.1 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain HOIP-UBA PF16678.5 gi|33152117|ref|NP_873470.1| - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 HOIP UBA domain pair dCMP_cyt_deam_2 PF08211.12 gi|33152118|ref|NP_873471.1| - 9.5e-33 113.2 0.8 9.5e-33 113.2 0.8 2.2 2 1 0 2 2 2 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_1 PF00383.23 gi|33152118|ref|NP_873471.1| - 1.8e-14 53.4 4.3 1.6e-12 47.2 1.7 2.4 2 0 0 2 2 2 2 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|33152118|ref|NP_873471.1| - 0.0065 16.2 0.8 0.015 15.1 0.2 1.8 2 0 0 2 2 2 1 MafB19-like deaminase FtsX_ECD PF18075.1 gi|33152119|ref|NP_873472.1| - 6.2e-14 52.4 0.0 9.3e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 FtsX extracellular domain FtsX PF02687.21 gi|33152119|ref|NP_873472.1| - 2.2e-06 28.1 11.1 9.4e-06 26.0 4.4 3.0 3 0 0 3 3 3 1 FtsX-like permease family DUF4083 PF13314.6 gi|33152119|ref|NP_873472.1| - 0.042 13.8 0.8 0.14 12.1 0.8 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) ABC_tran PF00005.27 gi|33152120|ref|NP_873473.1| - 9.6e-33 113.6 0.0 1.2e-32 113.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33152120|ref|NP_873473.1| - 5.3e-06 26.5 2.4 0.0055 16.6 0.2 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|33152120|ref|NP_873473.1| - 4.6e-05 23.1 0.3 9.6e-05 22.1 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|33152120|ref|NP_873473.1| - 0.00022 21.2 0.1 0.00047 20.1 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|33152120|ref|NP_873473.1| - 0.00067 20.1 0.1 0.00093 19.6 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|33152120|ref|NP_873473.1| - 0.0015 19.0 0.2 0.0027 18.2 0.2 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|33152120|ref|NP_873473.1| - 0.003 17.0 0.0 0.02 14.3 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|33152120|ref|NP_873473.1| - 0.0059 16.3 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|33152120|ref|NP_873473.1| - 0.0062 16.1 0.3 0.02 14.5 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|33152120|ref|NP_873473.1| - 0.0074 16.6 1.3 0.013 15.7 1.3 1.8 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|33152120|ref|NP_873473.1| - 0.022 14.3 0.1 0.052 13.1 0.0 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|33152120|ref|NP_873473.1| - 0.086 13.4 0.1 0.23 12.0 0.1 1.9 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|33152120|ref|NP_873473.1| - 0.086 12.0 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|33152120|ref|NP_873473.1| - 0.13 12.5 0.5 0.15 12.2 0.5 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|33152120|ref|NP_873473.1| - 0.14 12.2 0.1 0.31 11.1 0.1 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRP54 PF00448.22 gi|33152121|ref|NP_873474.1| - 7.7e-78 260.6 1.9 7.7e-78 260.6 1.9 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|33152121|ref|NP_873474.1| - 3.5e-13 49.6 0.4 1.6e-12 47.5 0.4 2.2 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.12 gi|33152121|ref|NP_873474.1| - 2.4e-08 33.5 0.1 7.2e-08 32.0 0.1 1.8 1 0 0 1 1 1 1 Zeta toxin AAA_17 PF13207.6 gi|33152121|ref|NP_873474.1| - 3.3e-05 24.3 4.3 0.0002 21.8 0.2 3.2 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 gi|33152121|ref|NP_873474.1| - 4.4e-05 23.7 0.1 9.9e-05 22.5 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|33152121|ref|NP_873474.1| - 0.00014 21.7 1.9 0.00033 20.4 1.8 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|33152121|ref|NP_873474.1| - 0.00052 20.4 3.7 0.011 16.1 0.3 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|33152121|ref|NP_873474.1| - 0.00071 19.9 0.5 0.004 17.4 0.0 2.4 3 0 0 3 3 2 1 AAA domain APS_kinase PF01583.20 gi|33152121|ref|NP_873474.1| - 0.0011 18.9 0.0 0.0032 17.4 0.0 1.8 1 0 0 1 1 1 1 Adenylylsulphate kinase CbiA PF01656.23 gi|33152121|ref|NP_873474.1| - 0.013 15.6 2.2 0.054 13.5 0.8 2.7 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 gi|33152121|ref|NP_873474.1| - 0.014 15.9 0.1 0.014 15.9 0.1 2.8 2 1 0 2 2 2 0 ABC transporter AAA_16 PF13191.6 gi|33152121|ref|NP_873474.1| - 0.02 15.3 0.8 0.057 13.8 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain MeaB PF03308.16 gi|33152121|ref|NP_873474.1| - 0.022 13.7 3.2 0.03 13.3 0.3 2.3 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Thymidylate_kin PF02223.17 gi|33152121|ref|NP_873474.1| - 0.025 14.3 0.2 0.025 14.3 0.2 2.5 3 0 0 3 3 3 0 Thymidylate kinase AAA_14 PF13173.6 gi|33152121|ref|NP_873474.1| - 0.025 14.6 1.4 0.14 12.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|33152121|ref|NP_873474.1| - 0.027 15.0 0.6 0.23 12.0 0.0 2.6 3 0 0 3 3 2 0 AAA domain AAA_31 PF13614.6 gi|33152121|ref|NP_873474.1| - 0.032 14.2 0.2 0.032 14.2 0.2 2.4 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|33152121|ref|NP_873474.1| - 0.038 14.0 0.0 0.088 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|33152121|ref|NP_873474.1| - 0.05 13.5 2.3 0.11 12.4 0.0 2.5 3 0 0 3 3 3 0 RsgA GTPase AAA_7 PF12775.7 gi|33152121|ref|NP_873474.1| - 0.065 12.7 0.1 0.22 11.0 0.1 1.9 2 0 0 2 2 1 0 P-loop containing dynein motor region RTT107_BRCT_5 PF16770.5 gi|33152121|ref|NP_873474.1| - 0.072 13.0 0.1 0.21 11.5 0.1 1.8 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain AAA_24 PF13479.6 gi|33152121|ref|NP_873474.1| - 0.1 12.3 0.6 0.2 11.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|33152121|ref|NP_873474.1| - 0.13 12.3 1.4 0.55 10.3 0.6 2.5 2 1 0 2 2 1 0 50S ribosome-binding GTPase AAA_19 PF13245.6 gi|33152121|ref|NP_873474.1| - 0.16 12.3 3.2 0.23 11.8 0.5 2.5 2 1 0 2 2 2 0 AAA domain ADK PF00406.22 gi|33152121|ref|NP_873474.1| - 0.18 11.9 1.2 1.9 8.6 0.0 2.7 2 0 0 2 2 2 0 Adenylate kinase HHH_2 PF12826.7 gi|33152121|ref|NP_873474.1| - 0.21 11.7 3.3 3 8.0 0.4 3.6 2 1 1 3 3 3 0 Helix-hairpin-helix motif DUF1451 PF07295.11 gi|33152121|ref|NP_873474.1| - 0.27 11.3 2.8 0.71 9.9 2.8 1.7 1 0 0 1 1 1 0 Zinc-ribbon containing domain Roc PF08477.13 gi|33152121|ref|NP_873474.1| - 0.52 10.5 2.2 1.3 9.3 0.6 2.5 2 1 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase VirE PF05272.11 gi|33152121|ref|NP_873474.1| - 0.61 9.8 2.8 24 4.6 1.3 2.3 2 0 0 2 2 2 0 Virulence-associated protein E NTPase_1 PF03266.15 gi|33152121|ref|NP_873474.1| - 0.66 9.9 4.7 0.39 10.6 0.3 2.6 3 0 0 3 3 3 0 NTPase AAA_23 PF13476.6 gi|33152121|ref|NP_873474.1| - 0.78 10.2 0.0 0.78 10.2 0.0 3.1 1 1 1 2 2 1 0 AAA domain ATP_bind_1 PF03029.17 gi|33152121|ref|NP_873474.1| - 1.5 8.6 5.6 0.74 9.6 0.5 2.8 2 2 1 3 3 3 0 Conserved hypothetical ATP binding protein Cons_hypoth95 PF03602.15 gi|33152122|ref|NP_873475.1| - 6e-60 202.0 0.0 6.8e-60 201.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|33152122|ref|NP_873475.1| - 4.4e-06 26.3 0.0 6.3e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RsmJ PF04378.13 gi|33152122|ref|NP_873475.1| - 0.00028 20.2 0.0 0.00035 19.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Methyltransf_31 PF13847.6 gi|33152122|ref|NP_873475.1| - 0.0021 17.9 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|33152122|ref|NP_873475.1| - 0.011 15.5 0.0 0.071 12.8 0.0 1.9 2 0 0 2 2 2 0 DNA methylase N6-adenineMlase PF10237.9 gi|33152122|ref|NP_873475.1| - 0.079 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase Methyltransf_16 PF10294.9 gi|33152122|ref|NP_873475.1| - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase DUF440 PF04269.12 gi|33152123|ref|NP_873476.1| - 1.4e-44 150.5 1.7 1.5e-44 150.4 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF440 RE_ApaLI PF09499.10 gi|33152123|ref|NP_873476.1| - 0.052 13.3 0.0 0.056 13.2 0.0 1.1 1 0 0 1 1 1 0 ApaLI-like restriction endonuclease TSP_C PF05735.12 gi|33152123|ref|NP_873476.1| - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Thrombospondin C-terminal region Flavin_Reduct PF01613.18 gi|33152124|ref|NP_873477.1| - 1.7e-31 109.4 0.1 1.9e-31 109.2 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain UQ_con PF00179.26 gi|33152124|ref|NP_873477.1| - 0.074 12.7 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme Peptidase_M3 PF01432.20 gi|33152125|ref|NP_873478.1| - 1.5e-161 538.8 0.1 2.4e-161 538.0 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M3 Radical_SAM PF04055.21 gi|33152126|ref|NP_873479.1| - 5.5e-27 95.2 0.1 8.4e-27 94.6 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|33152126|ref|NP_873479.1| - 1.5e-18 67.4 0.1 2.1e-18 66.9 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|33152126|ref|NP_873479.1| - 4.8e-06 26.7 0.1 9.1e-06 25.8 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain PFL-like PF02901.15 gi|33152127|ref|NP_873480.1| - 9.6e-202 672.1 0.1 1.2e-201 671.7 0.1 1.1 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 gi|33152127|ref|NP_873480.1| - 1.2e-42 144.8 0.0 2.8e-42 143.6 0.0 1.7 1 0 0 1 1 1 1 Glycine radical Form_Nir_trans PF01226.17 gi|33152128|ref|NP_873481.1| - 7.2e-75 251.3 30.3 8.3e-75 251.2 30.3 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter SNARE_assoc PF09335.11 gi|33152129|ref|NP_873482.1| - 5.7e-05 23.6 7.3 9e-05 22.9 7.3 1.4 1 1 0 1 1 1 1 SNARE associated Golgi protein SBP_bac_8 PF13416.6 gi|33152131|ref|NP_873484.1| - 3.8e-44 151.6 0.0 5e-44 151.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|33152131|ref|NP_873484.1| - 5.4e-31 107.9 0.3 7.3e-31 107.4 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|33152131|ref|NP_873484.1| - 6.3e-20 72.4 0.8 9.7e-20 71.7 0.8 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|33152131|ref|NP_873484.1| - 7.7e-12 45.4 0.0 1.2e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 gi|33152131|ref|NP_873484.1| - 1e-08 34.4 0.9 8.6e-07 28.0 1.2 2.1 2 0 0 2 2 2 2 Hypothetical lipoprotein (MG045 family) YchF-GTPase_C PF06071.13 gi|33152132|ref|NP_873485.1| - 2.2e-40 136.7 0.7 4.4e-40 135.7 0.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 gi|33152132|ref|NP_873485.1| - 1.4e-22 79.9 0.0 3.1e-22 78.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|33152132|ref|NP_873485.1| - 1.6e-09 37.5 0.0 2.1e-08 33.8 0.0 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B RACo_linker PF17650.1 gi|33152132|ref|NP_873485.1| - 0.028 14.3 0.0 0.057 13.3 0.0 1.4 1 0 0 1 1 1 0 RACo linker region Herpes_TK PF00693.18 gi|33152132|ref|NP_873485.1| - 0.046 12.9 0.0 0.07 12.4 0.0 1.2 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus TGS PF02824.21 gi|33152132|ref|NP_873485.1| - 0.078 13.0 0.6 1.5 9.0 0.3 2.7 2 1 0 2 2 2 0 TGS domain AAA_33 PF13671.6 gi|33152132|ref|NP_873485.1| - 0.11 12.7 0.0 24 5.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_18 PF13238.6 gi|33152132|ref|NP_873485.1| - 0.13 12.8 0.1 0.82 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain Pept_tRNA_hydro PF01195.19 gi|33152133|ref|NP_873486.1| - 3.3e-55 186.7 0.0 3.8e-55 186.5 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Xan_ur_permease PF00860.20 gi|33152135|ref|NP_873488.1| - 2.3e-99 332.8 42.7 2.6e-99 332.5 42.7 1.0 1 0 0 1 1 1 1 Permease family SSF PF00474.17 gi|33152136|ref|NP_873489.1| - 2e-132 441.9 27.2 2e-132 441.9 27.2 2.1 3 0 0 3 3 3 1 Sodium:solute symporter family ZapA PF05164.13 gi|33152138|ref|NP_873491.1| - 2.1e-15 56.9 3.0 2.7e-15 56.6 3.0 1.2 1 0 0 1 1 1 1 Cell division protein ZapA CLZ PF16526.5 gi|33152138|ref|NP_873491.1| - 0.03 14.7 2.3 1.6 9.2 0.1 2.7 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels UPF0149 PF03695.13 gi|33152139|ref|NP_873492.1| - 5.8e-25 88.6 3.0 6.5e-25 88.4 3.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) Phage_TAC_3 PF06896.11 gi|33152139|ref|NP_873492.1| - 0.14 12.7 0.0 0.47 11.1 0.0 1.9 2 1 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC DUF416 PF04222.12 gi|33152140|ref|NP_873493.1| - 1.8e-78 262.3 0.9 2e-78 262.1 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) Bac_DNA_binding PF00216.21 gi|33152141|ref|NP_873494.1| - 1.8e-33 114.6 0.4 1.9e-33 114.5 0.4 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 gi|33152141|ref|NP_873494.1| - 4.9e-08 33.1 0.0 4.9e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 gi|33152141|ref|NP_873494.1| - 2e-05 24.3 0.0 3e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 gi|33152141|ref|NP_873494.1| - 0.00015 21.9 0.0 0.00023 21.3 0.0 1.3 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 gi|33152141|ref|NP_873494.1| - 0.0055 16.8 0.0 0.0066 16.6 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 VWA_3 PF13768.6 gi|33152141|ref|NP_873494.1| - 0.0082 16.1 0.0 0.0094 15.9 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain GTP_EFTU_D2 PF03144.25 gi|33152141|ref|NP_873494.1| - 0.062 13.7 0.0 0.084 13.3 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu domain 2 CdAMP_rec PF06153.11 gi|33152141|ref|NP_873494.1| - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Cyclic-di-AMP receptor Thymidylat_synt PF00303.19 gi|33152142|ref|NP_873495.1| - 8.5e-69 231.6 0.0 9.5e-69 231.5 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase FKBP_N PF01346.18 gi|33152143|ref|NP_873496.1| - 4.3e-06 27.6 0.8 0.029 15.3 0.0 2.3 1 1 1 2 2 2 2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BATS PF06968.13 gi|33152144|ref|NP_873497.1| - 1e-16 60.8 0.0 2.2e-16 59.7 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 gi|33152144|ref|NP_873497.1| - 2.6e-14 53.9 0.1 4.3e-14 53.2 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily CSD PF00313.22 gi|33152145|ref|NP_873498.1| - 1.1e-28 98.9 0.2 1.2e-28 98.8 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|33152145|ref|NP_873498.1| - 0.00037 20.1 0.3 0.00063 19.4 0.3 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain ProQ PF04352.13 gi|33152146|ref|NP_873499.1| - 3.8e-36 123.3 1.6 4.6e-36 123.0 0.2 1.6 1 1 1 2 2 2 1 ProQ/FINO family PAPA-1 PF04795.12 gi|33152146|ref|NP_873499.1| - 0.06 14.2 7.5 0.13 13.1 7.5 1.5 1 0 0 1 1 1 0 PAPA-1-like conserved region DUF3824 PF12868.7 gi|33152146|ref|NP_873499.1| - 3.6 8.2 8.9 5.6 7.6 8.9 1.3 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) TSP_NTD PF17804.1 gi|33152147|ref|NP_873500.1| - 3e-53 181.0 6.8 3e-53 181.0 6.8 1.8 2 0 0 2 2 2 1 Tail specific protease N-terminal domain Peptidase_S41 PF03572.18 gi|33152147|ref|NP_873500.1| - 4.2e-50 169.6 0.6 6.9e-50 168.9 0.6 1.4 1 0 0 1 1 1 1 Peptidase family S41 DUF3340 PF11818.8 gi|33152147|ref|NP_873500.1| - 1.3e-39 135.8 5.6 1.3e-39 135.8 5.6 2.3 2 0 0 2 2 2 1 C-terminal domain of tail specific protease (DUF3340) PDZ PF00595.24 gi|33152147|ref|NP_873500.1| - 4.5e-13 49.4 0.9 9.6e-13 48.3 0.9 1.6 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|33152147|ref|NP_873500.1| - 0.00013 21.7 0.9 0.00051 19.8 0.9 2.0 1 1 0 1 1 1 1 PDZ domain PPR_2 PF13041.6 gi|33152147|ref|NP_873500.1| - 0.18 12.1 0.2 3.2 8.0 0.1 2.5 2 0 0 2 2 2 0 PPR repeat family TraI_2_C PF07515.11 gi|33152149|ref|NP_873502.1| - 1e-19 70.7 0.0 1e-19 70.6 0.0 1.0 1 0 0 1 1 1 1 Putative conjugal transfer nickase/helicase TraI C-term TraI_2 PF07514.11 gi|33152151|ref|NP_873504.1| - 1.3e-11 44.0 0.0 1.5e-11 43.8 0.0 1.0 1 0 0 1 1 1 1 Putative helicase Ish1 PF10281.9 gi|33152151|ref|NP_873504.1| - 0.01 16.1 0.0 0.017 15.4 0.0 1.5 1 1 0 1 1 1 0 Putative stress-responsive nuclear envelope protein TraI_2 PF07514.11 gi|33152152|ref|NP_873505.1| - 0.097 11.6 0.0 0.098 11.6 0.0 1.0 1 0 0 1 1 1 0 Putative helicase MipA PF06629.12 gi|33152153|ref|NP_873506.1| - 1e-12 48.8 1.0 1.2e-12 48.5 1.0 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA HlyD_3 PF13437.6 gi|33152154|ref|NP_873507.1| - 5.5e-19 68.8 2.5 1.2e-12 48.5 0.2 2.6 2 1 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|33152154|ref|NP_873507.1| - 8.3e-17 61.1 4.9 2.8e-16 59.4 5.2 1.7 2 0 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 gi|33152154|ref|NP_873507.1| - 3.5e-14 52.3 6.9 6.5e-12 45.1 3.3 3.1 2 0 0 2 2 2 2 Biotin-lipoyl like Biotin_lipoyl PF00364.22 gi|33152154|ref|NP_873507.1| - 3.5e-08 33.1 5.0 0.00067 19.4 0.4 3.6 2 1 1 3 3 3 2 Biotin-requiring enzyme Peptidase_M23 PF01551.22 gi|33152154|ref|NP_873507.1| - 0.00016 21.8 0.6 0.48 10.7 0.1 2.5 2 0 0 2 2 2 2 Peptidase family M23 PTS_EIIA_1 PF00358.20 gi|33152154|ref|NP_873507.1| - 0.00064 19.5 0.4 0.47 10.2 0.0 2.5 2 0 0 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Spc7 PF08317.11 gi|33152154|ref|NP_873507.1| - 0.013 14.5 4.0 0.022 13.7 4.0 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein RnfC_N PF13375.6 gi|33152154|ref|NP_873507.1| - 0.019 14.9 1.1 2.9 7.9 0.2 3.0 3 0 0 3 3 3 0 RnfC Barrel sandwich hybrid domain KxDL PF10241.9 gi|33152154|ref|NP_873507.1| - 0.031 14.5 7.2 0.1 12.9 6.2 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein OEP PF02321.18 gi|33152154|ref|NP_873507.1| - 0.039 13.7 11.0 0.072 12.9 11.0 1.5 1 0 0 1 1 1 0 Outer membrane efflux protein Sec8_exocyst PF04048.14 gi|33152154|ref|NP_873507.1| - 0.42 10.5 7.0 2.7 7.9 1.9 2.4 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain TPR_MLP1_2 PF07926.12 gi|33152154|ref|NP_873507.1| - 0.72 9.9 12.9 1.3 9.1 12.9 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein YqfD PF06898.11 gi|33152154|ref|NP_873507.1| - 6.1 5.6 11.0 5.7 5.7 0.4 3.1 3 0 0 3 3 3 0 Putative stage IV sporulation protein YqfD DUF4398 PF14346.6 gi|33152154|ref|NP_873507.1| - 7.6 7.2 12.1 46 4.7 12.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4398) MacB_PCD PF12704.7 gi|33152155|ref|NP_873508.1| - 5.7e-35 121.5 1.9 1e-34 120.7 0.0 2.2 2 0 0 2 2 2 1 MacB-like periplasmic core domain ABC_tran PF00005.27 gi|33152155|ref|NP_873508.1| - 2.2e-29 102.7 0.0 5.2e-29 101.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter FtsX PF02687.21 gi|33152155|ref|NP_873508.1| - 4e-12 46.5 3.2 4e-12 46.5 3.2 3.4 3 0 0 3 3 3 1 FtsX-like permease family AAA_21 PF13304.6 gi|33152155|ref|NP_873508.1| - 2.9e-05 24.0 2.1 0.14 12.0 0.1 2.9 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|33152155|ref|NP_873508.1| - 0.00019 21.1 0.1 0.00053 19.7 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|33152155|ref|NP_873508.1| - 0.00025 21.5 0.1 0.00081 19.8 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|33152155|ref|NP_873508.1| - 0.00029 20.4 11.0 0.005 16.3 0.1 3.2 2 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|33152155|ref|NP_873508.1| - 0.0047 16.9 0.6 0.014 15.3 0.1 2.0 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 gi|33152155|ref|NP_873508.1| - 0.017 15.7 3.4 0.021 15.4 0.3 2.4 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 gi|33152155|ref|NP_873508.1| - 0.03 14.4 0.5 1.9 8.5 0.0 3.1 2 1 1 3 3 3 0 Dynamin family T2SSE PF00437.20 gi|33152155|ref|NP_873508.1| - 0.035 13.2 0.1 0.11 11.5 0.1 1.8 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 gi|33152155|ref|NP_873508.1| - 0.04 14.0 1.1 0.097 12.8 0.2 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 gi|33152155|ref|NP_873508.1| - 0.078 12.7 0.2 13 5.5 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|33152155|ref|NP_873508.1| - 0.095 12.4 0.1 0.56 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|33152155|ref|NP_873508.1| - 0.096 13.2 3.5 1.2 9.7 0.3 3.1 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|33152155|ref|NP_873508.1| - 0.11 12.7 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF713 PF05218.14 gi|33152155|ref|NP_873508.1| - 0.12 12.1 1.1 0.28 10.9 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF713) AAA_22 PF13401.6 gi|33152155|ref|NP_873508.1| - 0.12 12.6 1.4 0.27 11.5 0.2 2.3 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|33152155|ref|NP_873508.1| - 0.19 11.9 1.7 0.91 9.7 0.4 2.6 2 1 0 2 2 2 0 AAA domain PHO4 PF01384.20 gi|33152155|ref|NP_873508.1| - 0.53 9.3 5.0 0.29 10.1 1.2 2.1 2 1 0 2 2 2 0 Phosphate transporter family OST3_OST6 PF04756.13 gi|33152155|ref|NP_873508.1| - 3.4 6.9 7.5 8.5 5.6 7.5 1.6 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family DUF87 PF01935.17 gi|33152155|ref|NP_873508.1| - 4.4 7.3 7.7 0.41 10.7 0.5 2.6 3 1 0 3 3 2 0 Helicase HerA, central domain Lactamase_B PF00753.27 gi|33152156|ref|NP_873509.1| - 6.5e-27 94.8 0.8 7.5e-27 94.6 0.8 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|33152156|ref|NP_873509.1| - 0.00022 20.8 0.3 0.00024 20.7 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|33152156|ref|NP_873509.1| - 0.011 14.8 0.0 0.021 13.9 0.1 1.4 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II APH PF01636.23 gi|33152157|ref|NP_873510.1| - 1.3e-16 61.3 1.3 7.6e-15 55.5 1.3 2.1 1 1 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 gi|33152157|ref|NP_873510.1| - 6.6e-15 55.3 0.6 4.8e-10 39.4 0.8 2.2 1 1 1 2 2 2 2 Choline/ethanolamine kinase MAP65_ASE1 PF03999.12 gi|33152157|ref|NP_873510.1| - 0.0094 14.7 0.1 0.0094 14.7 0.1 1.4 2 0 0 2 2 2 1 Microtubule associated protein (MAP65/ASE1 family) DUF4135 PF13575.6 gi|33152157|ref|NP_873510.1| - 0.034 13.5 0.0 0.048 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) EcKinase PF02958.20 gi|33152157|ref|NP_873510.1| - 0.21 10.9 4.2 0.14 11.4 1.7 1.9 2 1 1 3 3 3 0 Ecdysteroid kinase DUF1425 PF07233.12 gi|33152158|ref|NP_873511.1| - 1.8e-08 34.1 0.0 2.3e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1425) HIT PF01230.23 gi|33152159|ref|NP_873512.1| - 1.5e-29 102.6 0.1 1.7e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|33152159|ref|NP_873512.1| - 9.3e-22 77.7 0.0 1e-21 77.5 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding ABC-3 PF00950.17 gi|33152160|ref|NP_873513.1| - 9.9e-88 294.0 30.2 1.1e-87 293.8 30.2 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|33152160|ref|NP_873513.1| - 1.9e-07 30.4 30.1 3.3e-07 29.6 29.6 1.6 1 1 1 2 2 2 1 FecCD transport family ABC-3 PF00950.17 gi|33152161|ref|NP_873514.1| - 6.5e-85 284.7 33.0 7.3e-85 284.6 33.0 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|33152161|ref|NP_873514.1| - 7.3e-09 35.1 31.9 8.5e-09 34.8 31.1 1.5 1 1 0 1 1 1 1 FecCD transport family US30 PF17624.2 gi|33152161|ref|NP_873514.1| - 1.8 7.5 2.9 1 8.3 0.1 1.9 2 0 0 2 2 2 0 Family of unknown function RNase_HII PF01351.18 gi|33152162|ref|NP_873515.1| - 5.8e-42 143.8 0.0 6.7e-42 143.6 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII RsgA_GTPase PF03193.16 gi|33152163|ref|NP_873516.1| - 7.6e-58 195.1 0.0 1.1e-57 194.6 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|33152163|ref|NP_873516.1| - 8.5e-07 29.1 0.0 2.5e-06 27.5 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 gi|33152163|ref|NP_873516.1| - 1.9e-05 24.6 0.1 3.9e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|33152163|ref|NP_873516.1| - 5.9e-05 22.6 0.5 0.25 10.8 0.3 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|33152163|ref|NP_873516.1| - 0.0004 20.0 0.3 0.053 13.1 0.0 3.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Ras PF00071.22 gi|33152163|ref|NP_873516.1| - 0.00092 18.8 0.1 1.4 8.5 0.0 2.3 2 0 0 2 2 2 2 Ras family ABC_tran PF00005.27 gi|33152163|ref|NP_873516.1| - 0.0023 18.4 0.3 0.0069 16.9 0.2 1.8 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|33152163|ref|NP_873516.1| - 0.0068 16.8 0.0 0.029 14.7 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain RsgA_N PF16745.5 gi|33152163|ref|NP_873516.1| - 0.0073 16.0 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 RsgA N-terminal domain cobW PF02492.19 gi|33152163|ref|NP_873516.1| - 0.0085 15.7 0.2 1.9 8.1 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|33152163|ref|NP_873516.1| - 0.009 15.8 0.2 0.73 9.6 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.17 gi|33152163|ref|NP_873516.1| - 0.01 15.7 0.0 0.55 10.0 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Arf PF00025.21 gi|33152163|ref|NP_873516.1| - 0.016 14.7 0.1 0.043 13.3 0.1 1.7 1 1 1 2 2 2 0 ADP-ribosylation factor family Roc PF08477.13 gi|33152163|ref|NP_873516.1| - 0.021 15.0 0.2 0.11 12.7 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 gi|33152163|ref|NP_873516.1| - 0.03 14.1 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Dynamin_N PF00350.23 gi|33152163|ref|NP_873516.1| - 0.043 13.9 0.9 0.96 9.5 0.4 2.6 1 1 1 2 2 2 0 Dynamin family AAA_7 PF12775.7 gi|33152163|ref|NP_873516.1| - 0.064 12.8 0.2 0.14 11.6 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Septin PF00735.18 gi|33152163|ref|NP_873516.1| - 0.067 12.5 0.1 0.49 9.6 0.1 2.1 2 0 0 2 2 2 0 Septin AIG1 PF04548.16 gi|33152163|ref|NP_873516.1| - 0.08 12.3 0.2 0.41 9.9 0.0 2.1 1 1 1 2 2 2 0 AIG1 family LysR_substrate PF03466.20 gi|33152164|ref|NP_873517.1| - 2.2e-32 112.1 0.0 3e-32 111.7 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|33152164|ref|NP_873517.1| - 2.9e-19 68.8 0.2 5.6e-19 67.8 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HAD_2 PF13419.6 gi|33152165|ref|NP_873518.1| - 7.5e-24 84.8 0.1 1.2e-23 84.1 0.1 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|33152165|ref|NP_873518.1| - 2.8e-13 50.6 0.1 4.7e-13 49.9 0.1 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|33152165|ref|NP_873518.1| - 3.6e-11 43.0 0.0 1e-10 41.5 0.0 1.7 2 0 0 2 2 2 1 HAD-hyrolase-like PRP8_domainIV PF12134.8 gi|33152165|ref|NP_873518.1| - 0.025 14.2 0.7 0.3 10.7 0.0 2.1 2 0 0 2 2 2 0 PRP8 domain IV core Hydrolase_6 PF13344.6 gi|33152165|ref|NP_873518.1| - 0.12 12.5 0.0 0.19 11.8 0.0 1.8 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase LysR_substrate PF03466.20 gi|33152166|ref|NP_873519.1| - 2e-32 112.3 0.0 2.7e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|33152166|ref|NP_873519.1| - 3.9e-16 58.7 0.0 1e-15 57.4 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family MarR_2 PF12802.7 gi|33152166|ref|NP_873519.1| - 0.038 13.9 0.1 0.18 11.7 0.0 2.2 2 0 0 2 2 2 0 MarR family HTH_30 PF13556.6 gi|33152166|ref|NP_873519.1| - 0.068 13.0 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Pox_C7_F8A PF03287.14 gi|33152167|ref|NP_873520.1| - 0.027 14.5 0.7 0.027 14.5 0.7 1.8 2 0 0 2 2 2 0 Poxvirus C7/F8A protein UvrD_C PF13361.6 gi|33152168|ref|NP_873521.1| - 6.5e-82 275.7 0.6 1.2e-81 274.9 0.0 1.7 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain UvrD-helicase PF00580.21 gi|33152168|ref|NP_873521.1| - 1.5e-80 271.0 7.6 4.1e-80 269.7 2.1 2.3 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|33152168|ref|NP_873521.1| - 1.1e-31 110.1 0.0 2.6e-31 108.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|33152168|ref|NP_873521.1| - 3.5e-10 39.6 0.0 1.8e-09 37.3 0.0 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|33152168|ref|NP_873521.1| - 1.5e-09 37.9 0.2 0.00039 20.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 gi|33152168|ref|NP_873521.1| - 1.4e-06 28.3 0.1 0.014 15.1 0.0 3.3 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 gi|33152168|ref|NP_873521.1| - 0.001 18.9 0.9 0.0041 16.9 0.1 2.3 2 1 0 2 2 2 1 AAA domain SpoIIAA-like PF11964.8 gi|33152168|ref|NP_873521.1| - 0.021 15.8 1.5 0.3 12.2 0.0 3.5 5 0 0 5 5 5 0 SpoIIAA-like PhoH PF02562.16 gi|33152168|ref|NP_873521.1| - 0.087 12.3 0.7 0.58 9.6 0.2 2.3 2 0 0 2 2 2 0 PhoH-like protein Lyase_1 PF00206.20 gi|33152169|ref|NP_873522.1| - 3.3e-84 282.9 0.0 5e-84 282.4 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|33152169|ref|NP_873522.1| - 1.3e-23 83.5 0.0 3.1e-23 82.3 0.0 1.7 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal FumaraseC_C PF10415.9 gi|33152169|ref|NP_873522.1| - 0.12 12.9 0.1 5.7 7.4 0.0 2.6 2 0 0 2 2 2 0 Fumarase C C-terminus Sulfate_transp PF00916.20 gi|33152170|ref|NP_873523.1| - 3.1e-51 174.3 29.1 4.3e-51 173.8 29.1 1.1 1 0 0 1 1 1 1 Sulfate permease family HTH_25 PF13413.6 gi|33152171|ref|NP_873524.1| - 3.8e-18 65.1 0.1 7.5e-18 64.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4115 PF13464.6 gi|33152171|ref|NP_873524.1| - 2.4e-10 40.4 0.0 4.1e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4115) HTH_3 PF01381.22 gi|33152171|ref|NP_873524.1| - 1.3e-06 28.4 0.0 2.8e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|33152171|ref|NP_873524.1| - 5.8e-06 26.2 0.0 1.1e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|33152171|ref|NP_873524.1| - 2.3e-05 24.7 0.0 4.2e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain GspL_C PF12693.7 gi|33152171|ref|NP_873524.1| - 0.0014 18.5 0.6 0.0024 17.7 0.6 1.4 1 0 0 1 1 1 1 GspL periplasmic domain HTH_37 PF13744.6 gi|33152171|ref|NP_873524.1| - 0.0051 16.7 0.3 0.0097 15.8 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Med9 PF07544.13 gi|33152171|ref|NP_873524.1| - 0.019 15.0 0.6 0.057 13.5 0.6 1.8 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Saf_2TM PF18303.1 gi|33152171|ref|NP_873524.1| - 0.042 13.4 0.1 0.071 12.7 0.1 1.3 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF2316 PF10078.9 gi|33152171|ref|NP_873524.1| - 0.043 14.0 0.1 0.12 12.6 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2316) PolyA_pol_arg_C PF12626.7 gi|33152171|ref|NP_873524.1| - 0.071 13.1 0.4 0.33 11.0 0.3 2.0 2 0 0 2 2 2 0 Polymerase A arginine-rich C-terminus GWT1 PF06423.12 gi|33152171|ref|NP_873524.1| - 0.12 12.5 0.1 0.22 11.7 0.1 1.4 1 0 0 1 1 1 0 GWT1 GcpE PF04551.14 gi|33152172|ref|NP_873525.1| - 1.2e-130 435.7 0.1 1.4e-130 435.5 0.1 1.0 1 0 0 1 1 1 1 GcpE protein tRNA-synt_His PF13393.6 gi|33152173|ref|NP_873526.1| - 1.3e-45 156.0 0.0 1.8e-45 155.5 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|33152173|ref|NP_873526.1| - 9.3e-31 107.2 0.0 1.5e-30 106.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|33152173|ref|NP_873526.1| - 2.6e-10 40.3 0.2 6.6e-10 39.0 0.1 1.8 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2d PF01409.20 gi|33152173|ref|NP_873526.1| - 5e-05 22.9 0.0 0.0025 17.3 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|33152173|ref|NP_873526.1| - 0.0031 16.6 0.0 0.15 11.1 0.0 2.9 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) Adenine_glyco PF03352.13 gi|33152173|ref|NP_873526.1| - 0.016 15.0 0.0 0.031 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyladenine glycosylase TPR_21 PF09976.9 gi|33152174|ref|NP_873527.1| - 5.9e-48 163.1 7.7 6.9e-48 162.9 7.7 1.0 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_2 PF07719.17 gi|33152174|ref|NP_873527.1| - 0.00062 19.7 12.3 0.0086 16.1 0.5 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33152174|ref|NP_873527.1| - 0.00063 19.8 13.8 0.0011 19.0 0.3 4.7 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33152174|ref|NP_873527.1| - 0.001 18.8 7.0 0.0066 16.2 0.4 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat ACP_PD PF04336.12 gi|33152174|ref|NP_873527.1| - 0.0044 17.4 0.2 0.0089 16.4 0.2 1.6 1 0 0 1 1 1 1 Acyl carrier protein phosphodiesterase TPR_12 PF13424.6 gi|33152174|ref|NP_873527.1| - 0.0076 16.5 10.3 0.38 11.1 0.3 4.0 3 1 0 4 4 4 2 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|33152174|ref|NP_873527.1| - 0.014 15.4 0.9 0.026 14.5 0.7 1.6 1 1 0 1 1 1 0 Putative TPR-like repeat TPR_11 PF13414.6 gi|33152174|ref|NP_873527.1| - 0.015 15.0 6.1 0.024 14.3 0.9 3.2 3 0 0 3 3 3 0 TPR repeat TPR_19 PF14559.6 gi|33152174|ref|NP_873527.1| - 0.032 14.7 12.8 0.1 13.1 1.3 3.7 4 1 1 5 5 4 0 Tetratricopeptide repeat UvrD-helicase PF00580.21 gi|33152174|ref|NP_873527.1| - 0.057 12.9 3.2 0.067 12.7 3.2 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain TPR_14 PF13428.6 gi|33152174|ref|NP_873527.1| - 0.18 12.7 10.1 0.43 11.5 0.4 3.7 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33152174|ref|NP_873527.1| - 0.28 11.9 11.9 0.56 11.0 0.2 3.8 4 1 0 4 4 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 gi|33152174|ref|NP_873527.1| - 1.1 9.5 6.7 0.48 10.6 0.2 3.4 5 0 0 5 5 5 0 Tetratricopeptide repeat DUF2989 PF11207.8 gi|33152174|ref|NP_873527.1| - 3 7.5 8.0 1.6 8.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2989) Thioredoxin_7 PF13899.6 gi|33152174|ref|NP_873527.1| - 5.5 7.2 6.3 9.7 6.5 0.1 3.3 2 1 1 4 4 4 0 Thioredoxin-like NMN_transporter PF04973.12 gi|33152175|ref|NP_873528.1| - 2e-39 135.4 22.4 2e-39 135.4 22.4 1.6 2 0 0 2 2 2 1 Nicotinamide mononucleotide transporter Ribosomal_S6 PF01250.17 gi|33152177|ref|NP_873530.1| - 1.1e-28 99.3 0.1 1.8e-28 98.6 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S6 Cas_GSU0053 PF09617.10 gi|33152177|ref|NP_873530.1| - 0.012 15.6 0.3 0.014 15.4 0.3 1.1 1 0 0 1 1 1 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) SSB PF00436.25 gi|33152178|ref|NP_873531.1| - 2.2e-07 30.9 0.0 2.5e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Single-strand binding protein family tRNA_anti-codon PF01336.25 gi|33152178|ref|NP_873531.1| - 0.024 14.6 0.1 0.047 13.7 0.0 1.6 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain DDE_Tnp_1_5 PF13737.6 gi|33152178|ref|NP_873531.1| - 0.065 13.6 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain Ribosomal_S18 PF01084.20 gi|33152179|ref|NP_873532.1| - 1.5e-25 89.1 0.5 2e-25 88.8 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Ribosomal_L9_C PF03948.14 gi|33152180|ref|NP_873533.1| - 1.8e-26 92.4 1.2 3e-26 91.7 1.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 gi|33152180|ref|NP_873533.1| - 2.9e-22 77.9 0.1 5.2e-22 77.1 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Chalcone_3 PF16036.5 gi|33152181|ref|NP_873534.1| - 0.00031 20.9 0.1 0.00076 19.6 0.0 1.6 2 0 0 2 2 2 1 Chalcone isomerase-like Methyltransf_11 PF08241.12 gi|33152182|ref|NP_873535.1| - 2.8e-17 63.1 0.0 4.4e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33152182|ref|NP_873535.1| - 1e-16 61.1 0.0 1.4e-16 60.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152182|ref|NP_873535.1| - 1.5e-16 60.9 0.0 2.3e-16 60.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152182|ref|NP_873535.1| - 3.8e-15 56.4 0.0 6.2e-15 55.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152182|ref|NP_873535.1| - 5e-14 52.5 0.0 6.8e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|33152182|ref|NP_873535.1| - 4.2e-09 36.1 0.0 6.5e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Pox_MCEL PF03291.16 gi|33152182|ref|NP_873535.1| - 4.5e-09 35.9 0.1 8.5e-09 35.0 0.1 1.4 1 1 0 1 1 1 1 mRNA capping enzyme Methyltransf_9 PF08003.11 gi|33152182|ref|NP_873535.1| - 1.3e-08 34.1 0.0 2.4e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|33152182|ref|NP_873535.1| - 2.1e-06 27.4 0.0 7.6e-06 25.5 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|33152182|ref|NP_873535.1| - 5.3e-06 26.1 0.0 1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|33152182|ref|NP_873535.1| - 0.00012 21.5 0.0 0.00016 21.1 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 gi|33152182|ref|NP_873535.1| - 0.00044 19.9 0.0 0.00062 19.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.19 gi|33152182|ref|NP_873535.1| - 0.00075 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|33152182|ref|NP_873535.1| - 0.0023 17.4 0.0 0.0032 16.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|33152182|ref|NP_873535.1| - 0.0026 17.4 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.6 gi|33152182|ref|NP_873535.1| - 0.0031 17.5 0.1 0.0056 16.7 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain PNKP_ligase PF16542.5 gi|33152182|ref|NP_873535.1| - 0.0078 15.7 0.8 0.063 12.8 0.0 1.9 1 1 1 2 2 2 1 PNKP adenylyltransferase domain, ligase domain TPMT PF05724.11 gi|33152182|ref|NP_873535.1| - 0.0083 15.8 0.0 0.023 14.4 0.0 1.7 2 0 0 2 2 2 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_PK PF05891.12 gi|33152182|ref|NP_873535.1| - 0.0092 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase FtsJ PF01728.19 gi|33152182|ref|NP_873535.1| - 0.013 15.6 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase DREV PF05219.12 gi|33152182|ref|NP_873535.1| - 0.023 13.8 0.0 0.14 11.2 0.0 2.2 1 1 0 1 1 1 0 DREV methyltransferase MetW PF07021.12 gi|33152182|ref|NP_873535.1| - 0.033 13.8 0.3 0.23 11.1 0.2 2.1 1 1 1 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|33152182|ref|NP_873535.1| - 0.074 13.0 0.0 0.18 11.7 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|33152182|ref|NP_873535.1| - 0.11 12.2 0.1 0.22 11.3 0.0 1.4 2 0 0 2 2 1 0 Lysine methyltransferase Sua5_yciO_yrdC PF01300.18 gi|33152183|ref|NP_873536.1| - 2.2e-45 154.4 0.0 2.6e-45 154.1 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination PseudoU_synth_2 PF00849.22 gi|33152184|ref|NP_873537.1| - 1.6e-16 60.8 0.0 7e-16 58.7 0.0 2.0 2 0 0 2 2 2 1 RNA pseudouridylate synthase S4 PF01479.25 gi|33152184|ref|NP_873537.1| - 9.2e-10 38.1 0.3 9.2e-10 38.1 0.3 2.2 2 0 0 2 2 2 1 S4 domain NDK PF00334.19 gi|33152185|ref|NP_873538.1| - 9.1e-55 184.4 0.1 1e-54 184.2 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Herpes_UL7 PF01677.16 gi|33152185|ref|NP_873538.1| - 0.14 11.8 0.0 0.18 11.5 0.0 1.2 1 1 0 1 1 1 0 Herpesvirus UL7 like tRNA-synt_1g PF09334.11 gi|33152186|ref|NP_873539.1| - 2.8e-164 546.5 0.7 4.5e-164 545.9 0.7 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|33152186|ref|NP_873539.1| - 3.1e-23 81.7 0.0 7.3e-23 80.5 0.0 1.7 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|33152186|ref|NP_873539.1| - 3.5e-15 55.3 0.1 2.8e-10 39.1 0.1 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|33152186|ref|NP_873539.1| - 8.1e-14 51.7 2.6 2.3e-06 27.2 0.0 3.1 2 1 1 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|33152186|ref|NP_873539.1| - 7e-07 28.5 0.4 0.00031 19.8 0.0 3.1 2 1 1 3 3 3 2 tRNA synthetases class I (K) Anticodon_1 PF08264.13 gi|33152186|ref|NP_873539.1| - 0.00053 20.0 0.2 0.0012 18.8 0.2 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA Prp18 PF02840.15 gi|33152186|ref|NP_873539.1| - 0.23 11.5 0.8 1.8 8.6 0.1 2.6 2 1 1 3 3 3 0 Prp18 domain PRTase_3 PF15610.6 gi|33152186|ref|NP_873539.1| - 0.5 9.6 3.9 0.31 10.2 0.6 2.2 2 1 0 2 2 2 0 PRTase ComF-like PhnA_Zn_Ribbon PF08274.12 gi|33152186|ref|NP_873539.1| - 1.2 9.1 4.5 4.9 7.2 4.5 2.0 1 1 0 1 1 1 0 PhnA Zinc-Ribbon MR_MLE_C PF13378.6 gi|33152187|ref|NP_873540.1| - 4.9e-12 45.9 0.0 7.5e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like Enolase_like_N PF18374.1 gi|33152187|ref|NP_873540.1| - 0.1 12.0 0.0 0.22 10.9 0.0 1.5 1 0 0 1 1 1 0 Enolase N-terminal domain-like PseudoU_synth_2 PF00849.22 gi|33152188|ref|NP_873541.1| - 1.4e-16 61.0 0.0 1.3e-12 48.1 0.0 2.2 2 0 0 2 2 2 2 RNA pseudouridylate synthase S4 PF01479.25 gi|33152188|ref|NP_873541.1| - 1.1e-07 31.5 0.0 3.1e-07 30.0 0.0 1.8 2 0 0 2 2 2 1 S4 domain Peptidase_M41 PF01434.18 gi|33152189|ref|NP_873542.1| - 0.02 14.7 0.3 0.025 14.4 0.3 1.2 1 0 0 1 1 1 0 Peptidase family M41 Mst1_SARAH PF11629.8 gi|33152189|ref|NP_873542.1| - 0.063 13.4 2.4 2.3 8.4 0.1 2.4 2 0 0 2 2 2 0 C terminal SARAH domain of Mst1 FliP PF00813.20 gi|33152189|ref|NP_873542.1| - 0.35 10.7 0.8 0.5 10.2 0.7 1.3 1 1 0 1 1 1 0 FliP family AP_endonuc_2 PF01261.24 gi|33152191|ref|NP_873544.1| - 7.3e-36 123.6 0.1 9.1e-36 123.3 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Gly_radical PF01228.21 gi|33152193|ref|NP_873546.1| - 4.2e-22 78.7 0.5 6.4e-22 78.1 0.0 1.5 2 0 0 2 2 2 1 Glycine radical NADH_oxidored PF08040.11 gi|33152194|ref|NP_873547.1| - 0.058 13.1 0.3 0.073 12.8 0.3 1.1 1 0 0 1 1 1 0 MNLL subunit UDG PF03167.19 gi|33152195|ref|NP_873548.1| - 2.6e-26 92.5 0.0 3.7e-26 92.0 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily FTR PF01913.18 gi|33152195|ref|NP_873548.1| - 0.14 12.1 0.0 0.69 9.8 0.0 1.9 2 0 0 2 2 2 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase Glyco_hydro_1 PF00232.18 gi|33152196|ref|NP_873549.1| - 0.043 12.2 0.1 0.044 12.2 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 DUF441 PF04284.13 gi|33152197|ref|NP_873550.1| - 2.6e-46 157.1 22.8 3e-46 156.9 22.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF441) CPP1-like PF11833.8 gi|33152197|ref|NP_873550.1| - 0.75 9.4 6.3 0.26 10.9 3.4 1.6 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like GrpE PF01025.19 gi|33152198|ref|NP_873551.1| - 1.2e-47 161.6 6.1 1.6e-47 161.3 6.1 1.2 1 0 0 1 1 1 1 GrpE RuBisCO_large PF00016.20 gi|33152198|ref|NP_873551.1| - 0.011 15.0 0.2 0.014 14.6 0.2 1.2 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain SBP_bac_8 PF13416.6 gi|33152199|ref|NP_873552.1| - 4.4e-41 141.5 2.0 7.7e-41 140.8 2.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|33152199|ref|NP_873552.1| - 1.6e-35 122.7 1.1 2.2e-35 122.3 1.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|33152199|ref|NP_873552.1| - 4.9e-29 102.3 6.0 7e-29 101.8 6.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|33152199|ref|NP_873552.1| - 4.6e-11 42.9 0.0 1.4e-10 41.3 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 gi|33152199|ref|NP_873552.1| - 0.0011 17.8 1.0 0.2 10.4 0.1 2.9 2 1 0 3 3 3 2 Hypothetical lipoprotein (MG045 family) MatE PF01554.18 gi|33152200|ref|NP_873553.1| - 4e-68 228.1 35.4 2.3e-35 121.7 7.1 2.9 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|33152200|ref|NP_873553.1| - 3.8e-10 40.0 5.8 3.8e-10 40.0 5.8 4.4 2 2 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain Phage_holin_3_2 PF04550.12 gi|33152200|ref|NP_873553.1| - 3.3 8.3 6.8 1.7 9.2 2.4 2.6 2 0 0 2 2 2 0 Phage holin family 2 UvrD-helicase PF00580.21 gi|33152201|ref|NP_873554.1| - 6.2e-62 209.9 8.9 6.2e-62 209.9 8.9 2.8 2 1 1 3 3 3 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|33152201|ref|NP_873554.1| - 1.5e-24 87.0 0.1 6.3e-13 48.8 0.0 3.5 2 1 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|33152201|ref|NP_873554.1| - 2.5e-18 66.8 0.0 2.4e-17 63.6 0.0 2.6 2 1 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 gi|33152201|ref|NP_873554.1| - 3.4e-09 36.4 0.0 0.0023 17.7 0.0 2.6 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.7 gi|33152201|ref|NP_873554.1| - 3.2e-08 33.8 1.2 8e-08 32.5 0.3 2.2 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily ResIII PF04851.15 gi|33152201|ref|NP_873554.1| - 0.00021 21.4 0.1 0.0014 18.7 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|33152201|ref|NP_873554.1| - 0.0014 19.0 3.3 5.7 7.2 0.0 4.5 4 1 1 5 5 5 2 AAA domain AAA_30 PF13604.6 gi|33152201|ref|NP_873554.1| - 0.0047 16.7 0.0 0.052 13.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|33152201|ref|NP_873554.1| - 0.0087 15.6 0.0 0.022 14.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF4358 PF14270.6 gi|33152201|ref|NP_873554.1| - 0.035 14.4 0.0 0.14 12.5 0.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) AAA_12 PF13087.6 gi|33152201|ref|NP_873554.1| - 0.035 13.7 0.2 0.43 10.2 0.0 3.0 4 0 0 4 4 4 0 AAA domain DUF2977 PF11192.8 gi|33152201|ref|NP_873554.1| - 0.08 13.1 0.1 0.66 10.1 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2977) AAA_11 PF13086.6 gi|33152201|ref|NP_873554.1| - 0.13 12.0 0.0 0.79 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|33152201|ref|NP_873554.1| - 0.14 11.9 1.0 18 5.0 0.0 3.7 4 1 1 5 5 5 0 Viral (Superfamily 1) RNA helicase DNA_binding_1 PF01035.20 gi|33152202|ref|NP_873555.1| - 2.1e-34 117.5 0.0 3.2e-34 116.9 0.0 1.3 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|33152202|ref|NP_873555.1| - 2e-06 28.5 0.0 5e-06 27.2 0.0 1.7 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Toluene_X PF03349.16 gi|33152203|ref|NP_873556.1| - 4.3e-122 407.8 7.4 5.2e-122 407.5 7.4 1.0 1 0 0 1 1 1 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) Porin_4 PF13609.6 gi|33152203|ref|NP_873556.1| - 1.5e-06 28.2 12.2 0.00055 19.8 8.0 3.1 1 1 1 2 2 2 2 Gram-negative porin OMP_b-brl PF13505.6 gi|33152203|ref|NP_873556.1| - 7.7e-05 22.9 18.5 0.057 13.5 7.7 4.1 2 2 2 4 4 4 2 Outer membrane protein beta-barrel domain DUF2490 PF10677.9 gi|33152203|ref|NP_873556.1| - 0.00025 21.1 1.3 2.5 8.0 0.0 3.9 2 2 1 4 4 4 1 Protein of unknown function (DUF2490) Tnp_DNA_bind PF14706.6 gi|33152203|ref|NP_873556.1| - 0.0042 16.9 0.0 0.01 15.7 0.0 1.6 1 0 0 1 1 1 1 Transposase DNA-binding OmpA_membrane PF01389.17 gi|33152203|ref|NP_873556.1| - 0.035 13.8 0.4 0.25 11.0 0.0 2.3 1 1 1 2 2 2 0 OmpA-like transmembrane domain DUF3187 PF11383.8 gi|33152203|ref|NP_873556.1| - 0.04 13.1 2.4 1.3 8.1 0.1 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF3187) YadA_anchor PF03895.15 gi|33152203|ref|NP_873556.1| - 0.95 9.6 9.5 2.3 8.4 0.0 4.6 6 0 0 6 6 6 0 YadA-like membrane anchor domain Rrf2 PF02082.20 gi|33152205|ref|NP_873558.1| - 5.1e-28 97.2 0.3 8.7e-28 96.5 0.1 1.4 2 0 0 2 2 2 1 Transcriptional regulator FeoC PF09012.10 gi|33152205|ref|NP_873558.1| - 0.051 13.7 0.2 0.29 11.2 0.0 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_Crp_2 PF13545.6 gi|33152205|ref|NP_873558.1| - 0.069 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HrcA_DNA-bdg PF03444.15 gi|33152205|ref|NP_873558.1| - 0.088 12.5 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Aminotran_5 PF00266.19 gi|33152206|ref|NP_873559.1| - 2.9e-85 286.5 0.1 3.4e-85 286.2 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|33152206|ref|NP_873559.1| - 1.7e-07 30.9 0.2 2.1e-07 30.5 0.2 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|33152206|ref|NP_873559.1| - 4.9e-06 25.3 0.0 7.3e-06 24.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|33152206|ref|NP_873559.1| - 0.0001 21.7 0.1 0.00016 21.1 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family B12-binding PF02310.19 gi|33152206|ref|NP_873559.1| - 0.00092 19.2 0.2 0.025 14.6 0.0 2.8 2 1 1 3 3 3 1 B12 binding domain NifU_N PF01592.16 gi|33152207|ref|NP_873560.1| - 5.1e-56 188.3 0.2 5.6e-56 188.2 0.2 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Fe-S_biosyn PF01521.20 gi|33152208|ref|NP_873561.1| - 4.8e-25 87.9 0.0 5.3e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis HSCB_C PF07743.13 gi|33152209|ref|NP_873562.1| - 8.4e-17 61.4 7.4 8.4e-17 61.4 7.4 2.3 2 1 1 3 3 3 1 HSCB C-terminal oligomerisation domain DnaJ PF00226.31 gi|33152209|ref|NP_873562.1| - 1.9e-05 24.7 0.1 3.5e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain SCP1201-deam PF14428.6 gi|33152209|ref|NP_873562.1| - 0.17 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 SCP1.201-like deaminase DUF2625 PF10946.8 gi|33152210|ref|NP_873563.1| - 6.8e-67 224.5 1.7 8.2e-67 224.3 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2625 SMI1_KNR4 PF09346.10 gi|33152210|ref|NP_873563.1| - 0.00038 20.9 0.3 0.026 14.9 0.1 2.2 1 1 1 2 2 2 2 SMI1 / KNR4 family (SUKH-1) HSP70 PF00012.20 gi|33152211|ref|NP_873564.1| - 4e-188 626.4 4.0 4.7e-188 626.2 4.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|33152211|ref|NP_873564.1| - 1.6e-13 50.2 0.1 1.8e-11 43.4 0.0 2.6 2 1 0 2 2 2 2 MreB/Mbl protein Cofac_haem_bdg PF04187.13 gi|33152211|ref|NP_873564.1| - 0.089 12.8 1.0 0.18 11.8 1.0 1.5 1 0 0 1 1 1 0 Haem-binding uptake, Tiki superfamily, ChaN Fer2 PF00111.27 gi|33152212|ref|NP_873565.1| - 5.5e-14 51.9 3.2 7.3e-14 51.5 3.2 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fe-S_assembly PF04384.13 gi|33152213|ref|NP_873566.1| - 3.5e-22 78.8 0.6 3.7e-22 78.7 0.6 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster assembly Glyco_transf_8 PF01501.20 gi|33152214|ref|NP_873567.1| - 3.7e-52 177.4 12.2 4.3e-52 177.2 12.2 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 DUF4972 PF16342.5 gi|33152214|ref|NP_873567.1| - 0.064 12.9 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) PolyA_pol PF01743.20 gi|33152215|ref|NP_873568.1| - 1.3e-20 74.1 0.0 4.3e-20 72.4 0.0 1.9 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 gi|33152215|ref|NP_873568.1| - 3.1e-16 58.9 0.5 1.7e-15 56.5 0.3 2.3 2 0 0 2 2 2 1 Probable RNA and SrmB- binding site of polymerase A HD PF01966.22 gi|33152215|ref|NP_873568.1| - 1.5e-05 25.2 1.0 4.1e-05 23.8 0.4 1.9 2 0 0 2 2 2 1 HD domain Pro_isomerase PF00160.21 gi|33152216|ref|NP_873569.1| - 4.2e-50 170.1 0.5 5.2e-50 169.8 0.5 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD tRNA-synt_1e PF01406.19 gi|33152217|ref|NP_873570.1| - 6.9e-138 459.1 0.1 9.1e-138 458.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 gi|33152217|ref|NP_873570.1| - 2.5e-24 85.5 3.2 2.5e-24 85.5 3.2 2.4 3 0 0 3 3 3 1 DALR domain tRNA-synt_1g PF09334.11 gi|33152217|ref|NP_873570.1| - 2.2e-14 53.0 0.5 1e-06 27.8 0.1 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|33152217|ref|NP_873570.1| - 7.9e-06 25.0 0.0 0.00063 18.8 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|33152217|ref|NP_873570.1| - 0.0028 16.0 0.0 0.015 13.6 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) CUE PF02845.16 gi|33152217|ref|NP_873570.1| - 0.055 13.2 1.4 11 5.9 0.0 3.7 4 0 0 4 4 4 0 CUE domain tRNA-synt_1c PF00749.21 gi|33152217|ref|NP_873570.1| - 0.066 12.1 0.0 0.18 10.7 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain SM-ATX PF14438.6 gi|33152217|ref|NP_873570.1| - 0.081 13.1 0.0 0.7 10.1 0.0 2.2 2 0 0 2 2 2 0 Ataxin 2 SM domain Peptidase_S8 PF00082.22 gi|33152218|ref|NP_873571.1| - 1.3e-21 77.2 0.8 4.9e-21 75.3 0.3 2.2 2 0 0 2 2 2 1 Subtilase family PATR PF12951.7 gi|33152218|ref|NP_873571.1| - 8.5e-06 25.8 0.2 2.9e-05 24.1 0.2 2.0 1 0 0 1 1 1 1 Passenger-associated-transport-repeat OmpW PF03922.14 gi|33152218|ref|NP_873571.1| - 0.004 17.0 0.1 0.011 15.7 0.1 1.7 1 0 0 1 1 1 1 OmpW family BppU_IgG PF18667.1 gi|33152218|ref|NP_873571.1| - 0.018 15.2 0.0 0.076 13.2 0.0 2.1 2 0 0 2 2 2 0 Baseplate upper protein immunoglobulin like domain Prosystemin PF07376.11 gi|33152218|ref|NP_873571.1| - 0.12 11.9 0.1 0.23 10.9 0.1 1.4 1 0 0 1 1 1 0 Prosystemin OMP_b-brl PF13505.6 gi|33152219|ref|NP_873572.1| - 2.6e-05 24.4 5.0 3e-05 24.2 5.0 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Autotransporter PF03797.19 gi|33152219|ref|NP_873572.1| - 0.00019 21.2 0.7 0.00022 21.0 0.7 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain Opacity PF02462.15 gi|33152219|ref|NP_873572.1| - 0.0023 18.0 2.0 0.0027 17.8 2.0 1.1 1 0 0 1 1 1 1 Opacity family porin protein Porin_OmpG_1_2 PF16946.5 gi|33152219|ref|NP_873572.1| - 0.0046 16.3 0.6 0.034 13.4 0.2 1.9 1 1 1 2 2 2 1 OMPG-porin 1 family IAT_beta PF11924.8 gi|33152219|ref|NP_873572.1| - 0.0082 15.6 0.1 0.08 12.3 0.1 1.9 2 0 0 2 2 2 1 Inverse autotransporter, beta-domain Porin_O_P PF07396.11 gi|33152219|ref|NP_873572.1| - 0.0085 15.3 1.0 0.012 14.9 1.0 1.4 1 1 0 1 1 1 1 Phosphate-selective porin O and P AfaD PF05775.12 gi|33152219|ref|NP_873572.1| - 0.14 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Enterobacteria AfaD invasin protein HTH_3 PF01381.22 gi|33152220|ref|NP_873573.1| - 2.3e-15 56.4 0.2 2.3e-15 56.4 0.2 1.9 3 0 0 3 3 3 1 Helix-turn-helix HTH_19 PF12844.7 gi|33152220|ref|NP_873573.1| - 4.6e-11 42.6 0.7 4.6e-11 42.6 0.7 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|33152220|ref|NP_873573.1| - 9.5e-11 41.9 0.0 1.6e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|33152220|ref|NP_873573.1| - 4.4e-06 27.0 0.3 9.2e-06 26.0 0.0 1.6 2 1 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4_2 PF08281.12 gi|33152220|ref|NP_873573.1| - 0.0019 17.9 0.0 0.2 11.4 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|33152220|ref|NP_873573.1| - 0.002 17.6 0.0 0.053 13.0 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|33152220|ref|NP_873573.1| - 0.0021 17.6 3.2 0.0023 17.5 0.1 2.6 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_25 PF13413.6 gi|33152220|ref|NP_873573.1| - 0.0046 16.8 0.2 0.029 14.2 0.2 2.2 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|33152220|ref|NP_873573.1| - 0.016 15.2 0.1 0.016 15.2 0.1 2.1 2 1 0 2 2 2 0 Helix-turn-helix domain GIIM PF08388.11 gi|33152220|ref|NP_873573.1| - 0.042 13.9 0.8 0.12 12.4 0.0 2.0 2 0 0 2 2 2 0 Group II intron, maturase-specific domain HTH_AsnC-type PF13404.6 gi|33152220|ref|NP_873573.1| - 0.098 12.5 0.1 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|33152220|ref|NP_873573.1| - 0.13 12.2 5.2 0.28 11.2 0.1 3.0 4 0 0 4 4 4 0 HTH domain ABC_tran PF00005.27 gi|33152222|ref|NP_873575.1| - 1.1e-34 119.9 0.0 1.6e-34 119.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 gi|33152222|ref|NP_873575.1| - 2.8e-17 62.3 0.0 6.2e-17 61.2 0.0 1.6 1 0 0 1 1 1 1 NIL domain SMC_N PF02463.19 gi|33152222|ref|NP_873575.1| - 9.4e-09 35.0 0.3 2e-08 33.9 0.2 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|33152222|ref|NP_873575.1| - 3.5e-08 33.6 0.7 0.0012 18.7 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|33152222|ref|NP_873575.1| - 0.0002 21.7 0.9 0.002 18.4 0.9 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152222|ref|NP_873575.1| - 0.0015 19.0 0.2 0.0036 17.7 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|33152222|ref|NP_873575.1| - 0.0074 15.9 0.1 1 8.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|33152222|ref|NP_873575.1| - 0.009 15.7 0.0 0.017 14.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|33152222|ref|NP_873575.1| - 0.011 14.5 0.9 2 7.1 0.1 2.8 2 1 0 2 2 2 0 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|33152222|ref|NP_873575.1| - 0.012 15.6 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|33152222|ref|NP_873575.1| - 0.022 14.8 0.2 0.052 13.6 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|33152222|ref|NP_873575.1| - 0.093 12.4 0.3 0.9 9.2 0.3 2.1 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|33152222|ref|NP_873575.1| - 0.15 12.3 0.1 1.1 9.5 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.22 gi|33152223|ref|NP_873576.1| - 4.8e-23 81.8 15.7 4.8e-23 81.8 15.7 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2231 PF09990.9 gi|33152223|ref|NP_873576.1| - 0.098 13.1 6.8 9.9 6.7 0.1 3.2 1 1 2 3 3 3 0 Predicted membrane protein (DUF2231) Lipoprotein_9 PF03180.14 gi|33152224|ref|NP_873577.1| - 2e-88 295.5 10.5 2.3e-88 295.3 10.5 1.0 1 0 0 1 1 1 1 NLPA lipoprotein OpuAC PF04069.12 gi|33152224|ref|NP_873577.1| - 0.0098 15.5 2.0 0.023 14.3 2.0 1.8 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Kdo PF06293.14 gi|33152225|ref|NP_873578.1| - 1.3e-59 201.1 3.0 1.5e-59 200.9 3.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 gi|33152225|ref|NP_873578.1| - 5.6e-11 42.4 0.2 7.6e-11 41.9 0.2 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|33152225|ref|NP_873578.1| - 7.7e-08 32.0 0.6 1e-07 31.6 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|33152225|ref|NP_873578.1| - 1.1e-05 25.5 7.9 0.00068 19.6 5.2 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 gi|33152225|ref|NP_873578.1| - 0.00031 20.3 0.6 0.00071 19.2 0.4 1.7 1 1 1 2 2 2 1 PhoP regulatory network protein YrbL Choline_kinase PF01633.20 gi|33152225|ref|NP_873578.1| - 0.0012 18.5 0.2 0.0018 17.9 0.2 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kinase-like PF14531.6 gi|33152225|ref|NP_873578.1| - 0.0025 17.2 0.3 0.0031 16.9 0.3 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_Tyr PF07714.17 gi|33152225|ref|NP_873578.1| - 0.035 13.4 0.1 0.049 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase GTP_cyclohydroI PF01227.22 gi|33152227|ref|NP_873580.1| - 3e-63 212.5 0.1 3.6e-63 212.2 0.1 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 gi|33152227|ref|NP_873580.1| - 0.0046 17.1 0.1 0.0091 16.1 0.1 1.4 1 0 0 1 1 1 1 QueF-like protein PseudoU_synth_1 PF01416.20 gi|33152228|ref|NP_873581.1| - 1.1e-39 135.3 0.1 2.6e-28 98.6 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase Ribosomal_S30AE PF02482.19 gi|33152229|ref|NP_873582.1| - 9.7e-18 64.7 0.1 1.1e-17 64.5 0.1 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Lip_A_acyltrans PF03279.13 gi|33152230|ref|NP_873583.1| - 1.3e-95 319.9 0.0 1.5e-95 319.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase DHDPS PF00701.22 gi|33152231|ref|NP_873584.1| - 7.8e-110 366.1 0.1 8.8e-110 366.0 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family CutC PF03932.14 gi|33152231|ref|NP_873584.1| - 0.073 12.5 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 CutC family THF_DHG_CYH_C PF02882.19 gi|33152232|ref|NP_873585.1| - 1e-68 229.7 0.4 1.6e-68 229.1 0.4 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|33152232|ref|NP_873585.1| - 1.1e-38 132.0 0.7 1.7e-38 131.5 0.7 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain adh_short PF00106.25 gi|33152232|ref|NP_873585.1| - 0.082 12.4 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 short chain dehydrogenase DUF1672 PF07901.11 gi|33152232|ref|NP_873585.1| - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) MFS_1 PF07690.16 gi|33152233|ref|NP_873586.1| - 8.9e-42 143.3 74.4 3.1e-32 111.9 49.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|33152233|ref|NP_873586.1| - 9e-06 24.8 36.3 0.0054 15.7 10.3 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 gi|33152233|ref|NP_873586.1| - 2e-05 23.4 32.2 5e-05 22.1 18.4 3.3 1 1 2 3 3 3 3 MFS/sugar transport protein SAYSvFN PF10260.9 gi|33152233|ref|NP_873586.1| - 0.0042 17.0 4.4 1.9 8.5 0.0 4.3 3 1 0 3 3 3 2 Uncharacterized conserved domain (SAYSvFN) FdhE PF04216.12 gi|33152234|ref|NP_873587.1| - 9e-111 370.3 0.4 1e-110 370.2 0.4 1.0 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation Elf1 PF05129.13 gi|33152234|ref|NP_873587.1| - 0.0034 17.4 4.0 0.0099 15.9 1.9 2.5 1 1 1 2 2 2 1 Transcription elongation factor Elf1 like DZR PF12773.7 gi|33152234|ref|NP_873587.1| - 0.039 14.0 5.8 0.3 11.1 3.5 2.4 2 1 0 2 2 2 0 Double zinc ribbon DUF3944 PF13099.6 gi|33152234|ref|NP_873587.1| - 0.094 12.6 0.2 0.29 11.0 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) Lar_restr_allev PF14354.6 gi|33152234|ref|NP_873587.1| - 0.7 10.3 4.4 2.4 8.6 4.5 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 gi|33152234|ref|NP_873587.1| - 0.94 9.5 7.3 33 4.6 7.3 2.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|33152234|ref|NP_873587.1| - 1 8.9 4.3 3.3 7.2 0.5 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|33152234|ref|NP_873587.1| - 1.3 9.0 7.4 6 6.9 4.6 2.5 1 1 2 3 3 3 0 zinc-ribbons zf-ISL3 PF14690.6 gi|33152234|ref|NP_873587.1| - 1.6 9.5 7.5 0.88 10.3 4.4 2.2 2 1 0 2 2 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DnaJ_CXXCXGXG PF00684.19 gi|33152234|ref|NP_873587.1| - 2.3 8.6 6.9 1.1 9.6 3.2 2.0 1 1 1 2 2 2 0 DnaJ central domain zf-C3HC4_3 PF13920.6 gi|33152234|ref|NP_873587.1| - 5.5 6.9 8.8 0.89 9.5 4.5 1.9 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) HypA PF01155.19 gi|33152234|ref|NP_873587.1| - 9 6.4 8.9 42 4.2 5.0 2.7 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ni_hydr_CYTB PF01292.20 gi|33152235|ref|NP_873588.1| - 1.4e-21 77.0 21.2 1.7e-21 76.6 21.2 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|33152235|ref|NP_873588.1| - 2.4e-06 28.0 32.2 0.00061 20.3 13.9 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4405) 7tm_7 PF08395.12 gi|33152235|ref|NP_873588.1| - 0.078 12.2 8.5 0.1 11.8 8.5 1.1 1 0 0 1 1 1 0 7tm Chemosensory receptor DUF4131 PF13567.6 gi|33152235|ref|NP_873588.1| - 1.2 8.8 12.2 0.44 10.2 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Form-deh_trans PF09163.11 gi|33152236|ref|NP_873589.1| - 2.2e-07 30.6 0.0 2.5e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Formate dehydrogenase N, transmembrane FdhD-NarQ PF02634.15 gi|33152237|ref|NP_873590.1| - 5e-62 209.7 0.8 5.6e-62 209.5 0.8 1.0 1 0 0 1 1 1 1 FdhD/NarQ family HhH-GPD PF00730.25 gi|33152238|ref|NP_873591.1| - 4.3e-21 75.4 0.0 6.3e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|33152238|ref|NP_873591.1| - 2.1e-07 30.4 0.0 5e-07 29.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|33152238|ref|NP_873591.1| - 0.0003 21.0 3.8 0.00046 20.4 3.8 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|33152238|ref|NP_873591.1| - 0.12 13.0 0.1 0.47 11.1 0.1 2.1 1 1 1 2 2 2 0 Helix-hairpin-helix domain TauE PF01925.19 gi|33152239|ref|NP_873592.1| - 5.2e-40 137.5 29.5 6.2e-40 137.3 29.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DHFR_1 PF00186.19 gi|33152240|ref|NP_873593.1| - 6.2e-57 191.8 0.0 6.9e-57 191.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase Imp-YgjV PF10688.9 gi|33152242|ref|NP_873595.1| - 2.3e-09 37.2 1.5 2.4e-09 37.2 1.5 1.0 1 0 0 1 1 1 1 Bacterial inner membrane protein ATPase PF06745.13 gi|33152243|ref|NP_873596.1| - 5.8e-16 58.5 0.2 8.1e-10 38.4 0.0 2.2 1 1 1 2 2 2 2 KaiC Rubredoxin_2 PF18073.1 gi|33152243|ref|NP_873596.1| - 1.2e-12 47.3 5.7 2e-12 46.6 5.7 1.3 1 0 0 1 1 1 1 Rubredoxin metal binding domain AAA_25 PF13481.6 gi|33152243|ref|NP_873596.1| - 2.6e-11 43.5 0.1 7.1e-11 42.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain ChlI PF13541.6 gi|33152243|ref|NP_873596.1| - 3.9e-09 36.4 0.0 1.3e-08 34.7 0.0 1.8 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase DnaB_C PF03796.15 gi|33152243|ref|NP_873596.1| - 2.1e-07 30.5 0.4 0.00016 21.1 0.0 2.2 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain Lon_C PF05362.13 gi|33152243|ref|NP_873596.1| - 3.1e-07 30.1 0.0 7.2e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain RecA PF00154.21 gi|33152243|ref|NP_873596.1| - 2.5e-06 27.2 0.2 3.8e-06 26.6 0.2 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 gi|33152243|ref|NP_873596.1| - 5.3e-05 22.6 0.3 0.00092 18.5 0.3 2.2 1 1 0 1 1 1 1 Rad51 ABC_tran PF00005.27 gi|33152243|ref|NP_873596.1| - 0.00025 21.6 0.0 0.00047 20.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF2075 PF09848.9 gi|33152243|ref|NP_873596.1| - 0.00038 19.8 0.1 0.0007 18.9 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) GvpD PF07088.11 gi|33152243|ref|NP_873596.1| - 0.00046 18.9 0.1 0.019 13.6 0.0 2.2 1 1 0 2 2 2 1 GvpD gas vesicle protein AAA PF00004.29 gi|33152243|ref|NP_873596.1| - 0.00068 20.1 0.1 0.0026 18.2 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|33152243|ref|NP_873596.1| - 0.00076 19.8 0.0 0.0017 18.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152243|ref|NP_873596.1| - 0.0013 19.2 0.4 0.0037 17.7 0.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|33152243|ref|NP_873596.1| - 0.0017 18.4 0.0 0.0031 17.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|33152243|ref|NP_873596.1| - 0.0039 16.9 0.0 0.0075 16.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|33152243|ref|NP_873596.1| - 0.007 16.3 0.4 0.16 11.9 0.1 2.4 1 1 1 2 2 2 1 NTPase Zeta_toxin PF06414.12 gi|33152243|ref|NP_873596.1| - 0.0097 15.2 0.2 0.025 13.9 0.1 1.7 2 0 0 2 2 2 1 Zeta toxin zinc_ribbon_6 PF14599.6 gi|33152243|ref|NP_873596.1| - 0.025 14.6 1.2 0.057 13.4 1.2 1.7 1 0 0 1 1 1 0 Zinc-ribbon PAXNEB PF05625.11 gi|33152243|ref|NP_873596.1| - 0.035 13.2 0.1 0.054 12.6 0.1 1.2 1 0 0 1 1 1 0 PAXNEB protein cobW PF02492.19 gi|33152243|ref|NP_873596.1| - 0.052 13.1 0.2 0.11 12.1 0.1 1.6 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 gi|33152243|ref|NP_873596.1| - 0.057 13.2 0.3 0.13 12.1 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|33152243|ref|NP_873596.1| - 0.13 11.9 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain zf-RING_10 PF16685.5 gi|33152243|ref|NP_873596.1| - 0.14 12.4 0.5 0.31 11.2 0.5 1.6 1 0 0 1 1 1 0 zinc RING finger of MSL2 NACHT PF05729.12 gi|33152243|ref|NP_873596.1| - 0.15 11.9 0.3 0.29 11.0 0.3 1.6 1 1 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|33152243|ref|NP_873596.1| - 0.17 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain N_methyl PF07963.12 gi|33152244|ref|NP_873597.1| - 1.6e-09 36.9 2.1 2.9e-09 36.1 2.1 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif Pilin PF00114.19 gi|33152244|ref|NP_873597.1| - 7.5e-05 23.6 0.1 0.0001 23.2 0.1 1.2 1 0 0 1 1 1 1 Pilin (bacterial filament) T2SSE PF00437.20 gi|33152245|ref|NP_873598.1| - 9.6e-83 277.4 0.3 1.4e-82 276.9 0.3 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein T2SSE_N PF05157.15 gi|33152245|ref|NP_873598.1| - 5.9e-09 36.2 0.1 2e-08 34.5 0.1 1.9 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain AAA_22 PF13401.6 gi|33152245|ref|NP_873598.1| - 0.0014 18.9 0.0 0.011 16.0 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|33152245|ref|NP_873598.1| - 0.0015 19.0 0.8 0.0032 17.9 0.0 2.1 2 2 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 gi|33152245|ref|NP_873598.1| - 0.0056 16.2 0.0 0.012 15.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_30 PF13604.6 gi|33152245|ref|NP_873598.1| - 0.0059 16.3 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33152245|ref|NP_873598.1| - 0.0073 16.0 0.1 0.015 15.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|33152245|ref|NP_873598.1| - 0.011 15.7 0.0 0.059 13.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.17 gi|33152245|ref|NP_873598.1| - 0.022 14.8 1.3 5.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain ABC_tran PF00005.27 gi|33152245|ref|NP_873598.1| - 0.033 14.7 0.0 0.089 13.3 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 gi|33152245|ref|NP_873598.1| - 0.061 13.4 0.3 0.39 10.8 0.0 2.3 2 1 1 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|33152245|ref|NP_873598.1| - 0.13 12.6 0.6 0.39 11.1 0.1 2.2 3 1 0 3 3 3 0 AAA domain AAA_18 PF13238.6 gi|33152245|ref|NP_873598.1| - 0.13 12.8 0.1 1.5 9.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|33152245|ref|NP_873598.1| - 1.1 9.8 4.5 0.2 12.2 0.4 1.9 2 1 0 2 2 2 0 AAA domain T2SSF PF00482.23 gi|33152246|ref|NP_873599.1| - 1.8e-51 173.3 15.5 2.5e-27 95.3 0.5 2.7 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F DUF4064 PF13273.6 gi|33152246|ref|NP_873599.1| - 0.16 12.3 10.6 0.055 13.8 2.9 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF3671 PF12420.8 gi|33152246|ref|NP_873599.1| - 2.8 8.1 9.0 1.6 8.8 3.3 2.8 2 1 0 2 2 2 0 Protein of unknown function Peptidase_A24 PF01478.18 gi|33152247|ref|NP_873600.1| - 4.8e-05 23.7 15.5 4.8e-05 23.7 15.5 1.6 1 1 0 1 1 1 1 Type IV leader peptidase family CoaE PF01121.20 gi|33152248|ref|NP_873601.1| - 1.6e-65 220.1 0.5 2e-65 219.8 0.5 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_33 PF13671.6 gi|33152248|ref|NP_873601.1| - 0.0005 20.3 0.0 0.0009 19.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|33152248|ref|NP_873601.1| - 0.016 15.8 0.1 0.038 14.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|33152248|ref|NP_873601.1| - 0.036 14.3 0.6 0.058 13.6 0.1 1.6 2 1 0 2 2 2 0 AAA domain Scramblase PF03803.15 gi|33152248|ref|NP_873601.1| - 0.089 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Scramblase PRK PF00485.18 gi|33152248|ref|NP_873601.1| - 0.23 11.2 1.0 4.2 7.1 0.1 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family YacG PF03884.14 gi|33152249|ref|NP_873602.1| - 1.2e-24 85.8 1.3 1.4e-24 85.6 1.3 1.1 1 0 0 1 1 1 1 DNA gyrase inhibitor YacG zf-C6H2 PF15801.5 gi|33152249|ref|NP_873602.1| - 0.014 15.7 0.3 0.022 15.1 0.3 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DNA_pol3_delta PF06144.13 gi|33152250|ref|NP_873603.1| - 5.6e-33 114.2 7.3 5.6e-33 114.2 7.3 2.0 2 0 0 2 2 2 1 DNA polymerase III, delta subunit DNA_pol3_delt_C PF14840.6 gi|33152250|ref|NP_873603.1| - 1.5e-23 83.4 5.2 1.5e-23 83.4 5.2 2.2 3 1 0 3 3 3 1 Processivity clamp loader gamma complex DNA pol III C-term TIG_plexin PF17960.1 gi|33152250|ref|NP_873603.1| - 0.062 13.3 0.0 0.58 10.2 0.0 2.3 2 0 0 2 2 2 0 TIG domain LptE PF04390.12 gi|33152251|ref|NP_873604.1| - 5.8e-10 39.8 3.7 7.4e-10 39.5 3.7 1.1 1 0 0 1 1 1 1 Lipopolysaccharide-assembly Baculo_DNA_bind PF04786.12 gi|33152251|ref|NP_873604.1| - 0.0098 15.3 0.1 0.019 14.3 0.1 1.5 1 1 0 1 1 1 1 ssDNA binding protein DUF2861 PF11060.8 gi|33152251|ref|NP_873604.1| - 0.013 15.1 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2861) JLPA PF16668.5 gi|33152251|ref|NP_873604.1| - 0.026 13.6 0.4 0.029 13.4 0.4 1.1 1 0 0 1 1 1 0 Adhesin from Campylobacter tRNA-synt_1_2 PF13603.6 gi|33152252|ref|NP_873605.1| - 5.2e-77 257.6 0.0 1.1e-76 256.5 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 gi|33152252|ref|NP_873605.1| - 3.1e-74 250.3 13.9 2.8e-28 98.5 2.1 6.0 2 1 3 5 5 5 5 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|33152252|ref|NP_873605.1| - 7.8e-34 117.1 0.2 5.5e-24 84.6 0.0 4.2 3 1 1 4 4 4 4 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|33152252|ref|NP_873605.1| - 1e-18 67.7 0.1 2.4e-18 66.6 0.1 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|33152252|ref|NP_873605.1| - 1.3e-05 24.7 0.0 0.034 13.5 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|33152252|ref|NP_873605.1| - 7.8e-05 21.8 0.0 0.098 11.6 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class I (K) VasL PF12486.8 gi|33152252|ref|NP_873605.1| - 0.043 13.7 1.0 6.7 6.6 0.2 2.6 2 0 0 2 2 2 0 Type VI secretion system, EvfB, or VasL tRNA-synt_1c PF00749.21 gi|33152252|ref|NP_873605.1| - 0.22 10.4 1.1 3.5 6.4 0.3 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_2b PF00587.25 gi|33152253|ref|NP_873606.1| - 4.9e-36 124.4 0.0 9.2e-36 123.5 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|33152253|ref|NP_873606.1| - 2.4e-28 98.5 8.2 4.9e-28 97.5 8.2 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain CEP63 PF17045.5 gi|33152253|ref|NP_873606.1| - 0.011 15.6 1.4 0.018 15.0 1.4 1.2 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa Vps5 PF09325.10 gi|33152253|ref|NP_873606.1| - 0.088 12.3 2.6 0.14 11.6 2.6 1.3 1 0 0 1 1 1 0 Vps5 C terminal like APG6_N PF17675.1 gi|33152253|ref|NP_873606.1| - 0.11 13.0 3.1 0.29 11.6 3.1 1.7 1 0 0 1 1 1 0 Apg6 coiled-coil region FlgN PF05130.12 gi|33152253|ref|NP_873606.1| - 0.7 10.4 8.4 4.7 7.7 7.0 2.2 2 0 0 2 2 2 0 FlgN protein JIP_LZII PF16471.5 gi|33152253|ref|NP_873606.1| - 1.8 8.8 7.9 4 7.7 0.2 2.6 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II SmpB PF01668.18 gi|33152254|ref|NP_873607.1| - 3.7e-57 192.2 0.1 4.2e-57 192.1 0.1 1.0 1 0 0 1 1 1 1 SmpB protein DUF463 PF04317.12 gi|33152255|ref|NP_873608.1| - 2.1e-166 554.3 0.4 2.4e-166 554.1 0.4 1.0 1 0 0 1 1 1 1 YcjX-like family, DUF463 AAA_14 PF13173.6 gi|33152255|ref|NP_873608.1| - 0.069 13.2 0.3 0.55 10.3 0.0 2.6 3 0 0 3 3 3 0 AAA domain Pox_A32 PF04665.12 gi|33152255|ref|NP_873608.1| - 0.08 12.4 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein T2SSE PF00437.20 gi|33152255|ref|NP_873608.1| - 0.19 10.8 0.0 0.3 10.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein UPF0181 PF03701.14 gi|33152256|ref|NP_873609.1| - 2.7e-25 87.7 7.6 3e-25 87.6 7.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) HTH_ParB PF17762.1 gi|33152256|ref|NP_873609.1| - 0.0031 17.3 3.5 0.0065 16.3 2.4 2.0 1 1 1 2 2 2 1 HTH domain found in ParB protein PTS-HPr PF00381.19 gi|33152256|ref|NP_873609.1| - 0.038 14.2 0.1 0.044 14.0 0.1 1.1 1 0 0 1 1 1 0 PTS HPr component phosphorylation site PseudoU_synth_2 PF00849.22 gi|33152257|ref|NP_873610.1| - 1.8e-35 122.4 0.1 2.4e-35 122.0 0.1 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF446 PF04287.12 gi|33152258|ref|NP_873611.1| - 2.7e-29 101.1 1.6 3.1e-29 100.9 1.6 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase C DUF3333 PF11812.8 gi|33152259|ref|NP_873612.1| - 0.43 10.8 2.8 0.51 10.5 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) DAO PF01266.24 gi|33152260|ref|NP_873613.1| - 5.4e-45 154.5 0.0 7.6e-45 154.0 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Methyltransf_30 PF05430.11 gi|33152260|ref|NP_873613.1| - 2.3e-38 130.9 0.0 4.5e-38 129.9 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase FAD_binding_2 PF00890.24 gi|33152260|ref|NP_873613.1| - 0.00074 18.7 0.0 0.0012 18.0 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|33152260|ref|NP_873613.1| - 0.0028 17.0 0.1 0.056 12.7 0.0 2.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|33152260|ref|NP_873613.1| - 0.0037 16.0 0.8 0.015 14.0 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|33152260|ref|NP_873613.1| - 0.01 16.1 0.0 0.036 14.3 0.0 2.0 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|33152260|ref|NP_873613.1| - 0.018 15.6 0.0 0.31 11.6 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|33152260|ref|NP_873613.1| - 0.031 14.3 1.5 5.6 6.9 0.2 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding Pyr_redox_2 PF07992.14 gi|33152260|ref|NP_873613.1| - 0.048 12.9 0.0 0.13 11.4 0.0 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SDH_alpha PF03313.15 gi|33152261|ref|NP_873614.1| - 1.2e-98 330.0 2.6 1.5e-98 329.6 2.6 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 gi|33152261|ref|NP_873614.1| - 4.8e-54 182.9 0.1 9.9e-54 181.9 0.1 1.5 1 0 0 1 1 1 1 Serine dehydratase beta chain DUF2104 PF09877.9 gi|33152261|ref|NP_873614.1| - 0.075 13.3 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2104) Trp_Tyr_perm PF03222.13 gi|33152262|ref|NP_873615.1| - 7.7e-15 54.8 26.0 1e-14 54.4 26.0 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 gi|33152262|ref|NP_873615.1| - 1.3e-10 40.6 26.1 2.9e-09 36.1 26.1 2.1 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein DUF1218 PF06749.12 gi|33152262|ref|NP_873615.1| - 1.8 9.1 6.2 1.1 9.8 0.1 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF1218) CPP1-like PF11833.8 gi|33152262|ref|NP_873615.1| - 4.9 6.8 7.7 14 5.3 1.5 2.7 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like CN_hydrolase PF00795.22 gi|33152263|ref|NP_873616.1| - 3e-36 125.1 0.1 4.6e-36 124.5 0.1 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CorC_HlyC PF03471.17 gi|33152264|ref|NP_873617.1| - 2.6e-19 69.0 0.5 1.1e-18 67.0 0.0 2.2 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 gi|33152264|ref|NP_873617.1| - 1.4e-16 60.7 1.6 1.1e-08 35.3 0.1 2.5 2 0 0 2 2 2 2 CBS domain End_N_terminal PF12218.8 gi|33152264|ref|NP_873617.1| - 0.063 13.0 0.0 1.1 9.0 0.0 2.4 1 1 0 2 2 2 0 N terminal extension of bacteriophage endosialidase MIP PF00230.20 gi|33152265|ref|NP_873618.1| - 4.2e-64 216.4 14.8 4.8e-64 216.2 14.8 1.0 1 0 0 1 1 1 1 Major intrinsic protein TauE PF01925.19 gi|33152265|ref|NP_873618.1| - 0.3 10.7 30.1 0.96 9.0 16.7 3.1 1 1 1 2 2 2 0 Sulfite exporter TauE/SafE Lon_C PF05362.13 gi|33152266|ref|NP_873619.1| - 7.7e-96 319.5 2.4 1.6e-95 318.5 2.4 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 gi|33152266|ref|NP_873619.1| - 1.2e-38 133.1 1.5 1.2e-38 133.1 1.5 2.1 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 gi|33152266|ref|NP_873619.1| - 1.4e-21 77.3 0.1 2.7e-19 69.9 0.0 3.1 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|33152266|ref|NP_873619.1| - 5.5e-10 39.4 0.0 1.4e-09 38.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|33152266|ref|NP_873619.1| - 3.4e-08 33.4 0.1 1e-07 31.8 0.1 1.9 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_PrkA PF08298.11 gi|33152266|ref|NP_873619.1| - 4.8e-06 25.7 0.0 1.2e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.6 gi|33152266|ref|NP_873619.1| - 0.00022 21.6 0.0 0.0037 17.7 0.0 2.8 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|33152266|ref|NP_873619.1| - 0.00054 19.7 0.0 0.0016 18.2 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 gi|33152266|ref|NP_873619.1| - 0.0011 18.8 0.0 0.0042 16.9 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|33152266|ref|NP_873619.1| - 0.0037 17.0 0.0 0.012 15.3 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|33152266|ref|NP_873619.1| - 0.0089 16.6 1.1 0.043 14.4 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|33152266|ref|NP_873619.1| - 0.01 16.1 0.4 0.1 12.9 0.4 2.6 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|33152266|ref|NP_873619.1| - 0.015 15.2 0.1 0.11 12.4 0.0 2.5 2 0 0 2 2 2 0 RsgA GTPase AAA_14 PF13173.6 gi|33152266|ref|NP_873619.1| - 0.022 14.8 0.0 0.077 13.0 0.0 2.0 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33152266|ref|NP_873619.1| - 0.023 14.6 0.3 1 9.3 0.0 2.9 3 0 0 3 3 3 0 NACHT domain MMR_HSR1 PF01926.23 gi|33152266|ref|NP_873619.1| - 0.045 13.8 0.8 1.1 9.4 0.8 3.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase CNOT11 PF10155.9 gi|33152266|ref|NP_873619.1| - 0.067 13.4 0.4 0.2 11.8 0.4 1.9 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 AAA_33 PF13671.6 gi|33152266|ref|NP_873619.1| - 0.074 13.2 0.7 0.3 11.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|33152266|ref|NP_873619.1| - 0.097 13.2 17.4 5.6 7.4 0.0 3.0 1 1 1 2 2 2 0 AAA domain TsaE PF02367.17 gi|33152266|ref|NP_873619.1| - 0.11 12.5 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|33152266|ref|NP_873619.1| - 0.11 12.9 0.0 0.34 11.3 0.0 2.0 1 0 0 1 1 1 0 RNA helicase MIEAP PF16026.5 gi|33152266|ref|NP_873619.1| - 0.19 11.9 6.7 0.026 14.8 1.7 2.0 2 1 0 2 2 2 0 Mitochondria-eating protein ClpB_D2-small PF10431.9 gi|33152266|ref|NP_873619.1| - 0.39 10.8 5.1 0.41 10.7 2.4 2.4 2 0 0 2 2 2 0 C-terminal, D2-small domain, of ClpB protein DUF2004 PF09406.10 gi|33152266|ref|NP_873619.1| - 0.49 10.8 3.5 22 5.4 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2004) MFS_1 PF07690.16 gi|33152267|ref|NP_873620.1| - 4.5e-35 121.2 26.0 1e-32 113.4 18.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily ShlB PF03865.13 gi|33152269|ref|NP_873622.1| - 2.4e-72 244.0 15.4 3.8e-72 243.4 15.4 1.3 1 0 0 1 1 1 1 Haemolysin secretion/activation protein ShlB/FhaC/HecB POTRA_2 PF08479.11 gi|33152269|ref|NP_873622.1| - 2e-12 46.7 0.1 1.5e-11 44.0 0.0 2.5 3 0 0 3 3 3 1 POTRA domain, ShlB-type POTRA_3 PF17287.2 gi|33152269|ref|NP_873622.1| - 0.0003 20.2 0.0 0.00078 18.9 0.0 1.7 1 0 0 1 1 1 1 POTRA domain Peptidase_C58 PF03543.14 gi|33152270|ref|NP_873623.1| - 1.1e-67 227.7 2.2 1.1e-67 227.7 2.2 3.3 2 0 0 2 2 2 1 Yersinia/Haemophilus virulence surface antigen Haemagg_act PF05860.13 gi|33152270|ref|NP_873623.1| - 7.3e-32 109.8 5.7 7.3e-32 109.8 5.7 4.6 3 1 0 3 3 3 1 haemagglutination activity domain Fil_haemagg_2 PF13332.6 gi|33152270|ref|NP_873623.1| - 2.8e-22 79.6 14.4 2.8e-22 79.6 14.4 15.8 6 4 6 14 14 14 3 Hemagglutinin repeat ESPR PF13018.6 gi|33152270|ref|NP_873623.1| - 8e-06 25.5 0.9 1.5e-05 24.6 0.1 2.0 2 0 0 2 2 2 1 Extended Signal Peptide of Type V secretion system ECD PF18432.1 gi|33152270|ref|NP_873623.1| - 0.00016 21.6 0.1 22 5.1 0.0 4.4 4 0 0 4 4 4 3 Extracellular Cadherin domain DUF538 PF04398.12 gi|33152270|ref|NP_873623.1| - 0.0024 18.3 0.0 45 4.5 0.0 3.9 3 0 0 3 3 3 0 Protein of unknown function, DUF538 LIF_OSM PF01291.17 gi|33152270|ref|NP_873623.1| - 0.011 15.9 0.2 61 3.7 0.0 3.7 3 0 0 3 3 3 0 LIF / OSM family DAO PF01266.24 gi|33152271|ref|NP_873624.1| - 3.1e-54 184.9 0.1 3.9e-54 184.6 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer2_BFD PF04324.15 gi|33152271|ref|NP_873624.1| - 1.1e-09 38.5 3.0 2.2e-09 37.5 3.0 1.5 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain FAD_binding_2 PF00890.24 gi|33152271|ref|NP_873624.1| - 5e-09 35.7 1.5 0.00063 18.9 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain DAO_C PF16901.5 gi|33152271|ref|NP_873624.1| - 9.6e-07 28.7 0.1 1.7e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase Thi4 PF01946.17 gi|33152271|ref|NP_873624.1| - 0.00028 20.2 0.1 0.0048 16.2 0.0 2.3 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.7 gi|33152271|ref|NP_873624.1| - 0.00031 20.2 2.5 0.0043 16.5 2.5 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|33152271|ref|NP_873624.1| - 0.00063 19.1 1.3 0.0044 16.3 1.3 2.0 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|33152271|ref|NP_873624.1| - 0.0038 16.5 0.1 0.0057 15.9 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|33152271|ref|NP_873624.1| - 0.0058 16.8 1.7 0.014 15.6 1.7 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 gi|33152271|ref|NP_873624.1| - 0.022 14.7 0.1 0.046 13.6 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SO_alpha_A3 PF17806.1 gi|33152271|ref|NP_873624.1| - 0.04 14.2 0.0 0.11 12.9 0.0 1.7 2 0 0 2 2 1 0 Sarcosine oxidase A3 domain HI0933_like PF03486.14 gi|33152271|ref|NP_873624.1| - 0.045 12.5 1.3 0.13 11.0 0.6 1.9 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_3 PF13738.6 gi|33152271|ref|NP_873624.1| - 0.29 10.4 1.2 0.51 9.5 1.2 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|33152272|ref|NP_873625.1| - 1.7e-74 251.4 0.0 1.9e-74 251.2 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|33152272|ref|NP_873625.1| - 3.5e-09 36.7 0.0 5.4e-08 32.8 0.0 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|33152272|ref|NP_873625.1| - 1.3e-06 27.9 0.0 0.00048 19.5 0.0 3.0 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|33152272|ref|NP_873625.1| - 5.5e-05 22.4 2.4 0.0025 17.0 0.2 3.0 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|33152272|ref|NP_873625.1| - 5.7e-05 22.5 0.1 0.0001 21.7 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|33152272|ref|NP_873625.1| - 8.6e-05 22.7 0.8 0.00031 20.9 0.6 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|33152272|ref|NP_873625.1| - 0.00012 20.9 0.5 0.00074 18.3 0.9 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|33152272|ref|NP_873625.1| - 0.00063 19.1 2.0 0.0014 18.0 2.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|33152272|ref|NP_873625.1| - 0.0024 17.3 1.4 0.0046 16.3 1.4 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|33152272|ref|NP_873625.1| - 0.0094 15.2 0.2 0.016 14.5 0.2 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|33152272|ref|NP_873625.1| - 0.015 15.9 0.1 0.046 14.3 0.1 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase RP853 PF17542.2 gi|33152272|ref|NP_873625.1| - 0.11 11.6 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized RP853 Lycopene_cycl PF05834.12 gi|33152272|ref|NP_873625.1| - 0.2 10.6 0.7 0.34 9.9 0.7 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein CCG PF02754.16 gi|33152273|ref|NP_873626.1| - 4e-29 100.6 2.3 7.1e-14 51.8 0.2 2.6 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|33152273|ref|NP_873626.1| - 6.2e-10 39.4 5.5 6.2e-10 39.4 5.5 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33152273|ref|NP_873626.1| - 4.1e-08 33.2 9.1 0.0012 18.9 0.4 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33152273|ref|NP_873626.1| - 1.4e-06 28.4 11.5 0.004 17.3 1.4 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|33152273|ref|NP_873626.1| - 9.7e-06 26.1 23.8 9.2e-05 23.0 13.2 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|33152273|ref|NP_873626.1| - 2.1e-05 24.1 12.0 0.0065 16.2 2.1 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|33152273|ref|NP_873626.1| - 2.6e-05 24.7 13.7 2.9e-05 24.5 9.7 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|33152273|ref|NP_873626.1| - 0.00013 22.1 9.1 0.019 15.1 0.8 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|33152273|ref|NP_873626.1| - 0.0002 21.6 17.8 0.0041 17.5 2.5 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33152273|ref|NP_873626.1| - 0.00029 20.8 14.7 0.077 13.1 3.5 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|33152273|ref|NP_873626.1| - 0.00034 21.5 9.9 0.11 13.5 0.7 3.1 4 0 0 4 4 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|33152273|ref|NP_873626.1| - 0.0023 17.9 15.6 0.036 14.2 2.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|33152273|ref|NP_873626.1| - 0.0031 17.7 4.9 0.48 10.6 0.9 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|33152273|ref|NP_873626.1| - 0.81 10.6 15.4 0.75 10.7 2.0 3.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|33152273|ref|NP_873626.1| - 1.1 9.8 8.2 20 5.8 0.2 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I RibD_C PF01872.17 gi|33152274|ref|NP_873627.1| - 4e-61 206.3 0.2 1.2e-60 204.7 0.1 1.7 2 0 0 2 2 2 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 gi|33152274|ref|NP_873627.1| - 6.4e-22 77.3 0.1 1.2e-21 76.5 0.1 1.5 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|33152274|ref|NP_873627.1| - 6.1e-10 39.0 0.0 1.6e-09 37.6 0.0 1.8 2 0 0 2 2 2 1 MafB19-like deaminase Inv-AAD PF18785.1 gi|33152274|ref|NP_873627.1| - 2.9e-07 30.4 0.2 1.4e-05 25.0 0.2 2.4 1 1 0 1 1 1 1 Invertebrate-AID/APOBEC-deaminase NmrA PF05368.13 gi|33152274|ref|NP_873627.1| - 0.031 13.8 0.1 0.86 9.1 0.1 2.1 2 0 0 2 2 2 0 NmrA-like family Lum_binding PF00677.17 gi|33152275|ref|NP_873628.1| - 4.3e-51 170.8 5.4 1e-25 89.5 0.3 2.1 2 0 0 2 2 2 2 Lumazine binding domain DHBP_synthase PF00926.19 gi|33152276|ref|NP_873629.1| - 3.4e-80 268.1 0.2 4.5e-80 267.7 0.2 1.2 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase GTP_cyclohydro2 PF00925.20 gi|33152276|ref|NP_873629.1| - 4e-69 231.4 0.1 1.3e-68 229.7 0.0 1.8 2 0 0 2 2 2 1 GTP cyclohydrolase II DMRL_synthase PF00885.19 gi|33152277|ref|NP_873630.1| - 2.6e-60 202.3 0.4 3e-60 202.1 0.4 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase GreA_GreB_N PF03449.15 gi|33152279|ref|NP_873632.1| - 1.4e-25 89.2 1.1 2e-25 88.7 1.1 1.2 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 gi|33152279|ref|NP_873632.1| - 1.3e-24 85.9 0.0 1.9e-24 85.3 0.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Crl PF07417.12 gi|33152279|ref|NP_873632.1| - 0.035 14.2 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 Sigma factor-binding transcriptional regulator Crl Rota_NS53 PF00981.17 gi|33152279|ref|NP_873632.1| - 0.09 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Rotavirus RNA-binding Protein 53 (NS53) SIS PF01380.22 gi|33152280|ref|NP_873633.1| - 1.6e-31 108.8 0.1 2.6e-31 108.2 0.1 1.3 1 0 0 1 1 1 1 SIS domain CBS PF00571.28 gi|33152280|ref|NP_873633.1| - 9e-12 45.3 0.2 7.5e-06 26.3 0.0 2.9 3 0 0 3 3 3 2 CBS domain SIS_2 PF13580.6 gi|33152280|ref|NP_873633.1| - 3.9e-05 23.7 0.4 0.017 15.1 0.0 2.4 1 1 1 2 2 2 2 SIS domain DUF2529 PF10740.9 gi|33152280|ref|NP_873633.1| - 0.0028 17.3 0.0 0.0049 16.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF2529) Peptidase_M17 PF00883.21 gi|33152281|ref|NP_873634.1| - 9.3e-99 330.6 0.5 1.1e-98 330.3 0.5 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain DUF3663 PF12404.8 gi|33152281|ref|NP_873634.1| - 4.1e-31 106.8 0.5 1.1e-30 105.5 0.5 1.7 1 0 0 1 1 1 1 Peptidase DUF1730 PF08331.10 gi|33152281|ref|NP_873634.1| - 0.084 12.8 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1730) Acid_phosphat_B PF03767.14 gi|33152282|ref|NP_873635.1| - 6.7e-58 196.0 8.7 7.8e-58 195.8 8.7 1.0 1 0 0 1 1 1 1 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_6 PF13344.6 gi|33152282|ref|NP_873635.1| - 0.059 13.5 0.4 0.12 12.5 0.2 1.7 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|33152283|ref|NP_873636.1| - 2.1e-63 214.4 0.6 2.4e-63 214.3 0.6 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|33152283|ref|NP_873636.1| - 1.3e-14 54.3 0.1 4.2e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|33152283|ref|NP_873636.1| - 2.5e-07 31.2 0.1 0.0022 18.3 0.0 3.1 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|33152283|ref|NP_873636.1| - 4.1e-05 24.1 0.0 0.056 13.8 0.0 2.5 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.14 gi|33152283|ref|NP_873636.1| - 0.0012 18.5 0.3 0.98 9.0 0.0 3.4 2 2 1 3 3 3 1 HAD superfamily, subfamily IIIB (Acid phosphatase) HAD_2 PF13419.6 gi|33152283|ref|NP_873636.1| - 0.0028 17.7 0.7 0.4 10.8 0.0 3.3 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|33152283|ref|NP_873636.1| - 0.003 17.6 0.1 0.014 15.4 0.0 2.2 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Cofilin_ADF PF00241.20 gi|33152283|ref|NP_873636.1| - 0.0041 16.9 0.4 0.012 15.5 0.4 2.0 1 1 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Sigma70_r4_2 PF08281.12 gi|33152284|ref|NP_873637.1| - 9.6e-18 63.6 0.2 3.2e-17 61.9 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 gi|33152284|ref|NP_873637.1| - 2.6e-15 55.9 0.7 4.3e-15 55.2 0.7 1.4 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 gi|33152284|ref|NP_873637.1| - 9.8e-11 41.0 0.1 1.9e-10 40.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|33152284|ref|NP_873637.1| - 1.1e-07 32.0 0.4 3.8e-07 30.2 0.4 1.8 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 gi|33152284|ref|NP_873637.1| - 0.00086 19.0 0.0 0.0023 17.7 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_16 PF12645.7 gi|33152284|ref|NP_873637.1| - 0.00094 19.2 0.0 0.0019 18.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|33152284|ref|NP_873637.1| - 0.11 12.5 0.0 1.9 8.6 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|33152284|ref|NP_873637.1| - 0.14 12.6 0.0 0.58 10.7 0.0 2.0 1 1 1 2 2 2 0 Helix-turn-helix domain RseA_N PF03872.13 gi|33152285|ref|NP_873638.1| - 3.5e-16 59.5 0.7 6e-16 58.7 0.1 1.7 2 0 0 2 2 2 1 Anti sigma-E protein RseA, N-terminal domain RseA_C PF03873.13 gi|33152285|ref|NP_873638.1| - 1.6e-15 57.1 0.9 3.9e-15 55.8 0.9 1.6 1 0 0 1 1 1 1 Anti sigma-E protein RseA, C-terminal domain RseC_MucC PF04246.12 gi|33152286|ref|NP_873639.1| - 4.8e-27 94.5 1.1 5.3e-27 94.3 1.1 1.0 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC DUF5592 PF17332.2 gi|33152286|ref|NP_873639.1| - 0.19 12.3 2.5 0.33 11.5 2.5 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5592) UPRTase PF14681.6 gi|33152287|ref|NP_873640.1| - 4e-64 215.9 0.0 4.6e-64 215.7 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|33152287|ref|NP_873640.1| - 6.1e-14 51.8 0.2 8.5e-14 51.4 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|33152287|ref|NP_873640.1| - 0.0015 18.6 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain RrnaAD PF00398.20 gi|33152288|ref|NP_873641.1| - 6.9e-85 284.3 0.0 7.9e-85 284.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 gi|33152288|ref|NP_873641.1| - 5.3e-05 22.9 0.0 0.00059 19.5 0.0 2.2 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_11 PF08241.12 gi|33152288|ref|NP_873641.1| - 0.00012 22.7 0.0 0.0026 18.4 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152288|ref|NP_873641.1| - 0.0051 17.5 0.0 0.014 16.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152288|ref|NP_873641.1| - 0.008 16.0 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 gi|33152288|ref|NP_873641.1| - 0.049 12.7 0.0 0.081 12.0 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Rotamase PF00639.21 gi|33152289|ref|NP_873642.1| - 1.8e-25 89.7 1.6 1.2e-24 87.1 0.1 2.6 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 gi|33152289|ref|NP_873642.1| - 1.9e-20 73.6 0.7 1.9e-20 73.6 0.7 2.6 2 1 1 3 3 3 1 PPIC-type PPIASE domain SurA_N PF09312.11 gi|33152289|ref|NP_873642.1| - 5.5e-11 42.6 5.9 5.5e-11 42.6 5.9 2.7 2 1 0 2 2 2 1 SurA N-terminal domain Rotamase_2 PF13145.6 gi|33152289|ref|NP_873642.1| - 8.5e-09 36.3 3.5 1.1e-08 35.9 2.3 1.9 2 1 0 2 2 2 1 PPIC-type PPIASE domain SurA_N_3 PF13624.6 gi|33152289|ref|NP_873642.1| - 2e-07 30.9 4.5 2e-07 30.9 4.5 2.5 2 1 0 2 2 2 1 SurA N-terminal domain DUF2555 PF10742.9 gi|33152289|ref|NP_873642.1| - 0.012 15.4 0.1 0.39 10.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) SurA_N_2 PF13623.6 gi|33152289|ref|NP_873642.1| - 0.24 11.3 9.1 0.039 13.8 1.1 2.6 1 1 1 2 2 2 0 SurA N-terminal domain SATase_N PF06426.14 gi|33152289|ref|NP_873642.1| - 0.64 10.4 4.2 0.73 10.2 0.3 2.6 2 1 0 2 2 2 0 Serine acetyltransferase, N-terminal Pribosyltran PF00156.27 gi|33152290|ref|NP_873643.1| - 1.1e-19 70.5 0.2 1.3e-19 70.3 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|33152290|ref|NP_873643.1| - 1.5e-05 24.5 0.1 2.9e-05 23.6 0.1 1.3 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|33152290|ref|NP_873643.1| - 0.00091 18.8 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase PfkB PF00294.24 gi|33152291|ref|NP_873644.1| - 7.6e-47 160.1 0.1 1.2e-46 159.4 0.0 1.3 1 1 0 1 1 1 1 pfkB family carbohydrate kinase CTP_transf_like PF01467.26 gi|33152291|ref|NP_873644.1| - 4.4e-17 62.6 0.0 8.3e-17 61.7 0.0 1.5 1 0 0 1 1 1 1 Cytidylyltransferase-like Phos_pyr_kin PF08543.12 gi|33152291|ref|NP_873644.1| - 9.2e-07 28.5 0.0 1.1e-05 24.9 0.0 2.3 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|33152291|ref|NP_873644.1| - 0.00046 19.7 0.1 0.00094 18.7 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate kinase Propeptide_C25 PF08126.11 gi|33152291|ref|NP_873644.1| - 0.019 14.0 0.0 0.03 13.4 0.0 1.2 1 0 0 1 1 1 0 Propeptide_C25 FAD_syn PF06574.12 gi|33152291|ref|NP_873644.1| - 0.052 13.4 0.0 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 FAD synthetase MMR_HSR1 PF01926.23 gi|33152292|ref|NP_873645.1| - 7.4e-55 183.9 0.8 9.5e-28 96.6 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|33152292|ref|NP_873645.1| - 5.9e-33 113.6 0.1 1.1e-18 67.2 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B KH_dom-like PF14714.6 gi|33152292|ref|NP_873645.1| - 3.3e-25 88.2 0.1 1.4e-24 86.2 0.1 2.1 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GTP_EFTU PF00009.27 gi|33152292|ref|NP_873645.1| - 1.4e-18 67.2 2.8 7.7e-10 38.6 0.3 5.0 3 2 0 3 3 3 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|33152292|ref|NP_873645.1| - 2.9e-09 37.1 0.3 0.0023 17.8 0.0 4.6 2 2 2 5 5 5 2 RsgA GTPase Dynamin_N PF00350.23 gi|33152292|ref|NP_873645.1| - 3.1e-09 37.1 3.9 0.044 13.8 0.0 4.7 3 2 2 5 5 4 2 Dynamin family AIG1 PF04548.16 gi|33152292|ref|NP_873645.1| - 1.5e-08 34.3 0.0 0.00017 21.0 0.0 2.5 2 0 0 2 2 2 2 AIG1 family MeaB PF03308.16 gi|33152292|ref|NP_873645.1| - 3.4e-06 26.2 1.9 4.9 6.1 0.0 4.5 4 1 0 4 4 4 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Roc PF08477.13 gi|33152292|ref|NP_873645.1| - 6e-06 26.5 0.0 0.14 12.4 0.0 3.4 3 1 0 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 gi|33152292|ref|NP_873645.1| - 8.6e-06 25.4 0.0 0.014 15.0 0.0 3.1 2 2 0 2 2 2 2 Ras family AAA_24 PF13479.6 gi|33152292|ref|NP_873645.1| - 1.1e-05 25.3 0.0 0.06 13.1 0.0 3.0 2 2 0 3 3 3 2 AAA domain ABC_tran PF00005.27 gi|33152292|ref|NP_873645.1| - 4.6e-05 24.0 0.0 0.27 11.7 0.0 2.7 2 0 0 2 2 2 2 ABC transporter cobW PF02492.19 gi|33152292|ref|NP_873645.1| - 0.0001 22.0 5.1 0.26 10.9 0.1 4.6 3 2 1 5 5 5 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|33152292|ref|NP_873645.1| - 0.00023 21.4 0.8 1.6 9.0 0.0 3.6 4 1 0 5 5 3 2 AAA domain AAA_18 PF13238.6 gi|33152292|ref|NP_873645.1| - 0.00024 21.7 0.5 3.1 8.4 0.0 3.5 3 0 0 3 3 3 2 AAA domain PduV-EutP PF10662.9 gi|33152292|ref|NP_873645.1| - 0.00031 20.5 0.8 1.9 8.2 0.1 3.6 3 1 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 gi|33152292|ref|NP_873645.1| - 0.00049 19.6 0.3 0.17 11.3 0.0 2.9 3 0 0 3 3 3 1 Signal recognition particle receptor beta subunit Arf PF00025.21 gi|33152292|ref|NP_873645.1| - 0.00074 19.0 0.1 2.2 7.7 0.0 3.8 3 1 0 3 3 3 1 ADP-ribosylation factor family RNA_helicase PF00910.22 gi|33152292|ref|NP_873645.1| - 0.0012 19.2 0.0 2.9 8.3 0.0 3.0 3 0 0 3 3 2 2 RNA helicase NB-ARC PF00931.22 gi|33152292|ref|NP_873645.1| - 0.0014 17.9 0.0 1.3 8.2 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain NTPase_1 PF03266.15 gi|33152292|ref|NP_873645.1| - 0.0025 17.8 0.3 4.1 7.3 0.0 3.1 2 2 0 2 2 2 2 NTPase TniB PF05621.11 gi|33152292|ref|NP_873645.1| - 0.0051 16.2 0.1 3.5 7.0 0.0 2.7 3 0 0 3 3 3 2 Bacterial TniB protein AAA_28 PF13521.6 gi|33152292|ref|NP_873645.1| - 0.011 16.0 0.0 4.5 7.5 0.0 2.7 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|33152292|ref|NP_873645.1| - 0.017 15.3 0.0 5.2 7.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|33152292|ref|NP_873645.1| - 0.022 14.5 0.0 8.9 6.1 0.0 2.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|33152292|ref|NP_873645.1| - 0.051 14.0 2.8 11 6.4 0.0 3.9 1 1 1 2 2 2 0 AAA ATPase domain Ploopntkinase3 PF18751.1 gi|33152292|ref|NP_873645.1| - 0.07 13.0 0.0 1.7 8.6 0.0 2.4 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 MobB PF03205.14 gi|33152292|ref|NP_873645.1| - 0.071 13.0 0.1 31 4.4 0.0 3.3 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 gi|33152292|ref|NP_873645.1| - 0.12 12.0 0.0 30 4.1 0.0 3.2 3 0 0 3 3 3 0 AAA domain RelA_SpoT PF04607.17 gi|33152293|ref|NP_873646.1| - 3.8e-39 133.6 0.1 9.6e-39 132.3 0.1 1.7 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins HD_4 PF13328.6 gi|33152293|ref|NP_873646.1| - 5e-38 130.3 0.1 1.1e-37 129.2 0.1 1.6 1 0 0 1 1 1 1 HD domain TGS PF02824.21 gi|33152293|ref|NP_873646.1| - 1.6e-20 72.9 0.1 6.8e-20 70.9 0.0 2.1 2 0 0 2 2 2 1 TGS domain ACT_4 PF13291.6 gi|33152293|ref|NP_873646.1| - 3e-15 56.6 3.5 9.5e-15 55.0 3.5 1.9 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|33152293|ref|NP_873646.1| - 0.00077 19.2 0.3 0.0018 18.0 0.3 1.7 1 0 0 1 1 1 1 ACT domain DXP_reductoisom PF02670.16 gi|33152294|ref|NP_873647.1| - 3.1e-49 167.0 3.2 5.8e-49 166.1 3.2 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 gi|33152294|ref|NP_873647.1| - 4.3e-39 133.3 0.1 7.5e-39 132.6 0.1 1.4 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 gi|33152294|ref|NP_873647.1| - 6e-37 125.7 0.0 1.3e-36 124.6 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Semialdhyde_dh PF01118.24 gi|33152294|ref|NP_873647.1| - 0.02 15.3 0.5 0.12 12.8 0.1 2.4 1 1 1 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|33152294|ref|NP_873647.1| - 0.026 14.8 0.1 0.083 13.2 0.1 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_3 PF03447.16 gi|33152294|ref|NP_873647.1| - 0.029 15.0 1.1 0.14 12.8 1.1 2.1 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain NmrA PF05368.13 gi|33152294|ref|NP_873647.1| - 0.058 12.9 0.3 0.089 12.3 0.3 1.3 1 0 0 1 1 1 0 NmrA-like family GFO_IDH_MocA PF01408.22 gi|33152294|ref|NP_873647.1| - 0.083 13.7 0.2 0.48 11.2 0.2 2.1 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 gi|33152294|ref|NP_873647.1| - 0.1 12.7 0.1 0.26 11.4 0.1 1.7 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Acetyltransf_11 PF13720.6 gi|33152295|ref|NP_873648.1| - 3.1e-27 94.8 0.0 5.1e-27 94.2 0.0 1.4 1 0 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Hexapep PF00132.24 gi|33152295|ref|NP_873648.1| - 4e-19 67.5 22.4 2.2e-07 30.3 3.4 5.8 4 1 3 7 7 7 6 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|33152295|ref|NP_873648.1| - 0.51 10.7 11.3 0.73 10.2 2.4 2.8 1 1 2 3 3 3 0 Polymer-forming cytoskeletal FabA PF07977.13 gi|33152296|ref|NP_873649.1| - 5.6e-38 129.7 0.0 6.5e-38 129.5 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain 4HBT PF03061.22 gi|33152296|ref|NP_873649.1| - 0.0043 17.4 0.0 0.0066 16.8 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 gi|33152296|ref|NP_873649.1| - 0.0043 16.6 0.0 0.007 15.9 0.0 1.4 1 1 0 1 1 1 1 MaoC like domain LpxD PF04613.14 gi|33152297|ref|NP_873650.1| - 5.3e-25 87.0 0.9 9.4e-25 86.2 0.9 1.4 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Hexapep PF00132.24 gi|33152297|ref|NP_873650.1| - 1.3e-24 84.9 35.7 1.8e-07 30.6 2.2 6.0 4 1 3 7 7 7 7 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|33152297|ref|NP_873650.1| - 2e-07 30.6 37.4 2e-05 24.3 4.5 5.7 4 1 1 5 5 5 4 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|33152297|ref|NP_873650.1| - 5.8e-05 22.2 1.4 0.0013 17.8 0.2 2.4 2 1 1 3 3 3 1 L-fucokinase DUF4954 PF16314.5 gi|33152297|ref|NP_873650.1| - 0.065 11.4 6.6 0.098 10.8 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4954) OmpH PF03938.14 gi|33152298|ref|NP_873651.1| - 7.9e-23 81.3 23.1 3.4e-17 63.1 10.6 2.3 1 1 1 2 2 2 2 Outer membrane protein (OmpH-like) DivIVA PF05103.13 gi|33152298|ref|NP_873651.1| - 0.0035 17.4 3.4 0.0035 17.4 3.4 2.9 1 1 2 3 3 3 1 DivIVA protein Prominin PF05478.11 gi|33152298|ref|NP_873651.1| - 0.39 8.6 7.8 0.55 8.1 7.8 1.3 1 0 0 1 1 1 0 Prominin DUF4200 PF13863.6 gi|33152298|ref|NP_873651.1| - 0.54 10.7 33.9 0.24 11.8 7.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) GCN5L1 PF06320.13 gi|33152298|ref|NP_873651.1| - 0.79 9.9 14.8 0.27 11.4 1.8 2.8 2 1 1 3 3 3 0 GCN5-like protein 1 (GCN5L1) Cupin_8 PF13621.6 gi|33152298|ref|NP_873651.1| - 2.1 8.0 8.7 1.9 8.1 7.2 1.5 1 1 0 1 1 1 0 Cupin-like domain TMPIT PF07851.13 gi|33152298|ref|NP_873651.1| - 3.6 6.8 18.5 0.11 11.7 3.3 2.3 1 1 1 2 2 2 0 TMPIT-like protein APG6_N PF17675.1 gi|33152298|ref|NP_873651.1| - 3.8 8.0 35.1 0.63 10.6 12.6 3.0 2 1 1 3 3 3 0 Apg6 coiled-coil region Allexi_40kDa PF05549.11 gi|33152298|ref|NP_873651.1| - 8.9 5.7 8.4 36 3.8 0.1 2.2 1 1 2 3 3 3 0 Allexivirus 40kDa protein Exonuc_VII_L PF02601.15 gi|33152298|ref|NP_873651.1| - 9.9 5.6 14.9 15 5.0 14.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit Bac_surface_Ag PF01103.23 gi|33152299|ref|NP_873652.1| - 7.4e-96 321.4 16.3 7.4e-96 321.4 16.3 1.8 2 0 0 2 2 2 1 Surface antigen POTRA PF07244.15 gi|33152299|ref|NP_873652.1| - 4.3e-54 181.0 25.1 5.8e-17 62.0 0.8 5.7 6 0 0 6 6 6 5 Surface antigen variable number repeat POTRA_2 PF08479.11 gi|33152299|ref|NP_873652.1| - 3.3e-05 23.7 6.4 0.028 14.2 0.1 5.1 5 1 0 5 5 5 2 POTRA domain, ShlB-type POTRA_1 PF08478.10 gi|33152299|ref|NP_873652.1| - 0.00069 19.9 8.0 0.08 13.2 0.0 4.8 5 0 0 5 5 5 1 POTRA domain, FtsQ-type Peptidase_M50 PF02163.22 gi|33152300|ref|NP_873653.1| - 2.1e-79 266.4 0.9 2.4e-79 266.1 0.9 1.0 1 0 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|33152300|ref|NP_873653.1| - 1.7e-09 37.9 0.3 3.5e-05 24.0 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 gi|33152300|ref|NP_873653.1| - 4e-09 36.2 0.0 1.8e-07 30.9 0.0 2.5 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 gi|33152300|ref|NP_873653.1| - 1e-05 25.8 0.0 0.0013 19.0 0.0 2.5 2 0 0 2 2 2 1 PDZ domain Peptidase_M50B PF13398.6 gi|33152300|ref|NP_873653.1| - 0.5 10.0 5.9 0.95 9.1 0.1 2.8 3 0 0 3 3 3 0 Peptidase M50B-like CTP_transf_1 PF01148.20 gi|33152301|ref|NP_873654.1| - 1.7e-66 224.7 18.4 2e-66 224.5 18.4 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family DUF5518 PF17647.1 gi|33152301|ref|NP_873654.1| - 0.15 12.2 0.3 0.15 12.2 0.3 3.5 3 0 0 3 3 3 0 Family of unknown function (DUF5518) ERGIC_N PF13850.6 gi|33152301|ref|NP_873654.1| - 2.1 8.8 6.8 27 5.2 3.5 3.3 2 1 1 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Prenyltransf PF01255.19 gi|33152302|ref|NP_873655.1| - 2.5e-81 272.5 0.2 2.8e-81 272.3 0.2 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase NusA_N PF08529.11 gi|33152302|ref|NP_873655.1| - 0.06 13.7 0.1 0.099 13.0 0.1 1.3 1 0 0 1 1 1 0 NusA N-terminal domain HAGH_C PF16123.5 gi|33152303|ref|NP_873656.1| - 3.6e-20 72.3 0.8 6e-20 71.5 0.8 1.4 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 gi|33152303|ref|NP_873656.1| - 1e-12 48.5 1.0 2.1e-11 44.2 1.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|33152303|ref|NP_873656.1| - 4.3e-06 26.4 0.9 8.2e-06 25.5 0.9 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|33152303|ref|NP_873656.1| - 0.11 11.5 1.0 0.16 11.1 1.0 1.3 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II PAP2 PF01569.21 gi|33152304|ref|NP_873657.1| - 4.3e-24 84.8 4.7 4.3e-24 84.8 4.7 2.1 1 1 1 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|33152304|ref|NP_873657.1| - 3.7e-10 39.8 8.7 3.7e-10 39.8 8.7 1.6 1 1 0 1 1 1 1 PAP2 superfamily VMA21 PF09446.10 gi|33152304|ref|NP_873657.1| - 0.012 15.7 0.3 0.012 15.7 0.3 3.0 4 0 0 4 4 4 0 VMA21-like domain CRS1_YhbY PF01985.21 gi|33152305|ref|NP_873658.1| - 2.8e-22 78.7 0.3 3.3e-22 78.4 0.3 1.1 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Glycos_transf_2 PF00535.26 gi|33152306|ref|NP_873659.1| - 2.2e-17 63.4 0.0 7.6e-17 61.6 0.1 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|33152306|ref|NP_873659.1| - 3.2e-07 30.8 0.2 8.5e-07 29.4 0.2 1.8 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|33152306|ref|NP_873659.1| - 0.00021 20.9 0.0 0.00032 20.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|33152306|ref|NP_873659.1| - 0.0036 17.2 0.0 0.0049 16.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_9 PF01075.17 gi|33152307|ref|NP_873660.1| - 2e-15 56.8 0.0 2.7e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) DHDPS PF00701.22 gi|33152307|ref|NP_873660.1| - 0.082 11.6 0.2 0.15 10.7 0.2 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family Arginosuc_synth PF00764.19 gi|33152309|ref|NP_873662.1| - 3.2e-58 197.9 0.0 3.9e-58 197.6 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|33152309|ref|NP_873662.1| - 0.011 15.2 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC DUF535 PF04393.13 gi|33152310|ref|NP_873663.1| - 2.7e-44 151.5 2.4 3.2e-44 151.3 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) RNase_H PF00075.24 gi|33152311|ref|NP_873664.1| - 4e-49 166.5 0.1 4.4e-49 166.3 0.1 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 gi|33152311|ref|NP_873664.1| - 0.0038 17.0 0.0 0.0055 16.5 0.0 1.6 1 1 0 1 1 1 1 Reverse transcriptase-like Colicin_V PF02674.16 gi|33152313|ref|NP_873666.1| - 2.7e-38 131.2 13.0 3.4e-38 130.9 13.0 1.0 1 0 0 1 1 1 1 Colicin V production protein TM_helix PF05552.12 gi|33152313|ref|NP_873666.1| - 0.029 14.3 1.7 0.029 14.3 1.7 3.2 4 0 0 4 4 4 0 Conserved TM helix Bac_export_2 PF01312.19 gi|33152313|ref|NP_873666.1| - 0.043 13.0 1.1 0.06 12.5 0.5 1.4 1 1 0 1 1 1 0 FlhB HrpN YscU SpaS Family MtrG PF04210.13 gi|33152313|ref|NP_873666.1| - 0.16 11.8 0.5 0.55 10.1 0.4 1.9 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Deltameth_res PF16020.5 gi|33152313|ref|NP_873666.1| - 1.4 8.9 3.5 4.3 7.3 0.0 2.9 3 0 0 3 3 3 0 Deltamethrin resistance DUF5358 PF17311.2 gi|33152314|ref|NP_873667.1| - 4.7e-12 46.2 1.4 6.4e-12 45.8 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5358) 2-oxogl_dehyd_N PF16078.5 gi|33152314|ref|NP_873667.1| - 0.038 13.6 1.0 0.075 12.6 1.0 1.5 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus SmpA_OmlA PF04355.13 gi|33152315|ref|NP_873668.1| - 1.8e-27 94.9 0.4 2.4e-27 94.5 0.4 1.2 1 0 0 1 1 1 1 SmpA / OmlA family DUF4999 PF16390.5 gi|33152315|ref|NP_873668.1| - 0.079 13.2 0.5 0.26 11.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF3192 PF11399.8 gi|33152315|ref|NP_873668.1| - 0.091 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3192) Ribonuc_L-PSP PF01042.21 gi|33152316|ref|NP_873669.1| - 2.7e-43 146.8 1.9 3e-43 146.7 1.9 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP FIVAR PF07554.13 gi|33152316|ref|NP_873669.1| - 0.014 16.2 0.7 0.019 15.7 0.7 1.3 1 0 0 1 1 1 0 FIVAR domain Cu-oxidase_4 PF02578.15 gi|33152317|ref|NP_873670.1| - 5.8e-72 242.0 0.0 6.8e-72 241.8 0.0 1.0 1 0 0 1 1 1 1 Multi-copper polyphenol oxidoreductase laccase MliC PF09864.9 gi|33152318|ref|NP_873671.1| - 6.3e-13 48.5 0.0 8.8e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Membrane-bound lysozyme-inhibitor of c-type lysozyme Malectin_like PF12819.7 gi|33152318|ref|NP_873671.1| - 0.016 14.4 0.1 0.017 14.3 0.1 1.1 1 0 0 1 1 1 0 Malectin-like domain LUD_dom PF02589.15 gi|33152319|ref|NP_873672.1| - 8.9e-29 100.6 0.5 1.1e-28 100.3 0.5 1.1 1 0 0 1 1 1 1 LUD domain LUD_dom PF02589.15 gi|33152320|ref|NP_873673.1| - 3.7e-51 173.6 0.2 5e-51 173.1 0.2 1.2 1 0 0 1 1 1 1 LUD domain DUF3390 PF11870.8 gi|33152320|ref|NP_873673.1| - 4.7e-15 55.7 0.2 1.4e-14 54.2 0.2 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3390) Fer4_8 PF13183.6 gi|33152320|ref|NP_873673.1| - 1.2e-11 44.9 0.8 3.1e-11 43.6 0.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|33152320|ref|NP_873673.1| - 2.9e-07 30.9 1.6 8.4e-07 29.4 1.6 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|33152320|ref|NP_873673.1| - 1.5e-06 28.2 9.0 6.7e-05 22.9 10.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|33152320|ref|NP_873673.1| - 2e-06 28.3 7.6 6.3e-06 26.7 7.6 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|33152320|ref|NP_873673.1| - 5.1e-06 26.6 3.7 6.3e-05 23.1 5.1 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|33152320|ref|NP_873673.1| - 4.8e-05 24.2 4.4 0.23 12.4 0.1 2.7 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|33152320|ref|NP_873673.1| - 5.4e-05 23.0 12.8 0.00067 19.6 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|33152320|ref|NP_873673.1| - 0.00072 19.5 12.4 0.023 14.8 2.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|33152320|ref|NP_873673.1| - 0.0014 18.3 14.3 0.015 15.1 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_20 PF14691.6 gi|33152320|ref|NP_873673.1| - 0.0026 17.5 4.1 3.4 7.5 0.4 3.3 3 0 0 3 3 3 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.7 gi|33152320|ref|NP_873673.1| - 0.017 15.6 2.1 0.017 15.6 2.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|33152320|ref|NP_873673.1| - 0.063 13.5 3.9 4.2 7.6 0.1 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|33152320|ref|NP_873673.1| - 0.064 14.2 15.6 1.5 9.9 3.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|33152320|ref|NP_873673.1| - 0.12 13.2 0.8 1.7 9.5 0.0 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|33152320|ref|NP_873673.1| - 0.33 11.1 14.0 7.4 6.8 14.0 2.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|33152320|ref|NP_873673.1| - 0.76 10.4 10.8 0.28 11.8 0.4 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|33152320|ref|NP_873673.1| - 6.9 7.6 10.7 8.5 7.3 1.0 3.0 3 0 0 3 3 2 0 4Fe-4S dicluster domain CCG PF02754.16 gi|33152321|ref|NP_873674.1| - 2.1e-26 91.9 2.3 2.5e-12 46.8 0.1 2.2 2 0 0 2 2 2 2 Cysteine-rich domain Na_H_antiporter PF03553.14 gi|33152323|ref|NP_873676.1| - 6e-87 291.7 28.9 6e-87 291.7 28.9 2.5 3 0 0 3 3 3 1 Na+/H+ antiporter family TM_helix PF05552.12 gi|33152323|ref|NP_873676.1| - 0.11 12.5 0.2 0.11 12.5 0.2 4.8 5 1 1 6 6 6 0 Conserved TM helix SIS_2 PF13580.6 gi|33152324|ref|NP_873677.1| - 7.6e-31 107.0 0.1 1.2e-30 106.4 0.1 1.3 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 gi|33152324|ref|NP_873677.1| - 3.5e-09 36.6 0.0 7.2e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 SIS domain Antibiotic_NAT PF02522.14 gi|33152324|ref|NP_873677.1| - 0.14 11.9 0.0 0.22 11.3 0.0 1.4 1 1 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase Sigma54_activat PF00158.26 gi|33152325|ref|NP_873678.1| - 2.8e-51 173.6 0.1 4.7e-51 172.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_50 PF18024.1 gi|33152325|ref|NP_873678.1| - 1.1e-22 79.3 0.2 2.3e-22 78.3 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma54_activ_2 PF14532.6 gi|33152325|ref|NP_873678.1| - 5.9e-20 71.8 0.2 1.4e-19 70.5 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_5 PF07728.14 gi|33152325|ref|NP_873678.1| - 0.0022 18.0 0.0 0.017 15.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|33152325|ref|NP_873678.1| - 0.041 13.4 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region HTH_10 PF04967.12 gi|33152325|ref|NP_873678.1| - 0.051 13.4 0.0 0.56 10.1 0.0 2.4 2 0 0 2 2 2 0 HTH DNA binding domain Phage_antitermQ PF06530.12 gi|33152325|ref|NP_873678.1| - 0.055 13.4 0.0 0.36 10.8 0.0 2.2 2 0 0 2 2 2 0 Phage antitermination protein Q AAA_2 PF07724.14 gi|33152325|ref|NP_873678.1| - 0.087 12.9 0.1 0.27 11.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) HTH_AsnC-type PF13404.6 gi|33152325|ref|NP_873678.1| - 0.13 12.1 0.4 0.48 10.3 0.1 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain SBP_bac_5 PF00496.22 gi|33152326|ref|NP_873679.1| - 1.5e-64 218.3 2.2 2.8e-64 217.5 2.2 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 gi|33152327|ref|NP_873680.1| - 1.3e-38 132.6 14.3 1.3e-38 132.6 14.3 2.3 3 0 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|33152328|ref|NP_873681.1| - 2.3e-15 56.8 15.0 2.3e-15 56.8 15.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|33152328|ref|NP_873681.1| - 3.9e-09 36.3 0.5 3.9e-09 36.3 0.5 4.1 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C DUF3169 PF11368.8 gi|33152328|ref|NP_873681.1| - 0.01 15.4 3.2 0.01 15.4 3.2 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) ABC_tran PF00005.27 gi|33152329|ref|NP_873682.1| - 1.5e-25 90.3 0.0 2.1e-25 89.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|33152329|ref|NP_873682.1| - 7.3e-13 48.8 0.0 1.4e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 gi|33152329|ref|NP_873682.1| - 0.029 14.7 0.0 0.046 14.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|33152329|ref|NP_873682.1| - 0.082 13.3 0.0 0.19 12.1 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|33152329|ref|NP_873682.1| - 0.09 13.1 0.0 1.1 9.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|33152329|ref|NP_873682.1| - 0.16 11.8 0.0 0.34 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|33152329|ref|NP_873682.1| - 0.21 11.4 0.6 7.2 6.3 0.0 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DNA_pol_A PF00476.20 gi|33152330|ref|NP_873683.1| - 1.6e-153 511.2 6.6 3.2e-153 510.2 6.6 1.5 1 0 0 1 1 1 1 DNA polymerase family A 5_3_exonuc_N PF02739.16 gi|33152330|ref|NP_873683.1| - 2.5e-55 186.7 0.0 7e-55 185.3 0.0 1.9 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain DNA_pol_A_exo1 PF01612.20 gi|33152330|ref|NP_873683.1| - 3.9e-42 143.9 8.7 9.4e-41 139.4 3.0 3.0 2 1 0 2 2 2 2 3'-5' exonuclease 5_3_exonuc PF01367.20 gi|33152330|ref|NP_873683.1| - 2.2e-27 95.5 0.1 2.2e-27 95.5 0.1 3.0 3 0 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|33152330|ref|NP_873683.1| - 0.00085 19.9 0.1 0.0049 17.4 0.1 2.3 1 0 0 1 1 1 1 Helix-hairpin-helix domain FtsQ PF03799.15 gi|33152330|ref|NP_873683.1| - 0.58 11.0 2.2 2.2e+02 2.7 0.0 4.6 4 0 0 4 4 4 0 Cell division protein FtsQ LolA PF03548.15 gi|33152331|ref|NP_873684.1| - 2e-55 187.0 4.9 2.7e-55 186.5 4.9 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 gi|33152331|ref|NP_873684.1| - 0.00086 18.7 0.1 0.0074 15.7 0.0 2.3 2 1 0 2 2 2 1 Predicted periplasmic protein (DUF2092) DNA_PPF PF02916.15 gi|33152331|ref|NP_873684.1| - 0.023 15.1 0.5 0.053 13.9 0.2 1.7 2 0 0 2 2 2 0 DNA polymerase processivity factor RimK PF08443.11 gi|33152332|ref|NP_873685.1| - 9.6e-54 181.8 0.3 1.3e-53 181.4 0.3 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Rimk_N PF18030.1 gi|33152332|ref|NP_873685.1| - 7.5e-25 87.2 0.1 1.7e-24 86.0 0.1 1.6 1 0 0 1 1 1 1 RimK PreATP-grasp domain GSH-S_ATP PF02955.16 gi|33152332|ref|NP_873685.1| - 5.9e-12 45.3 0.2 8.4e-12 44.8 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|33152332|ref|NP_873685.1| - 7.5e-09 35.2 0.4 0.0061 15.9 0.0 3.0 1 1 2 3 3 3 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|33152332|ref|NP_873685.1| - 1e-08 35.4 0.0 1.4e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|33152332|ref|NP_873685.1| - 0.0099 15.2 0.1 2.2 7.4 0.0 2.9 1 1 1 2 2 2 2 YheC/D like ATP-grasp Ins134_P3_kin PF05770.11 gi|33152332|ref|NP_873685.1| - 0.023 14.2 0.1 1.4 8.4 0.0 2.2 1 1 1 2 2 2 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain GSH-S_N PF02951.14 gi|33152332|ref|NP_873685.1| - 0.086 13.0 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain DUF218 PF02698.17 gi|33152333|ref|NP_873686.1| - 1.3e-25 89.9 0.0 1.8e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 DUF218 domain AAA_26 PF13500.6 gi|33152333|ref|NP_873686.1| - 0.0055 16.5 0.0 0.0094 15.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 gi|33152333|ref|NP_873686.1| - 0.031 13.3 0.0 0.045 12.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Citrate_ly_lig PF08218.11 gi|33152334|ref|NP_873687.1| - 7.2e-79 263.7 0.3 1.1e-78 263.2 0.3 1.3 1 0 0 1 1 1 1 Citrate lyase ligase C-terminal domain Acetyltransf_10 PF13673.7 gi|33152334|ref|NP_873687.1| - 4e-05 23.5 0.1 0.00017 21.6 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|33152334|ref|NP_873687.1| - 0.00024 21.5 0.2 0.00086 19.7 0.1 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain HIGH_NTase1 PF05636.11 gi|33152334|ref|NP_873687.1| - 0.0012 18.2 0.3 0.85 8.8 0.1 2.1 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase CTP_transf_like PF01467.26 gi|33152334|ref|NP_873687.1| - 0.012 15.8 0.3 0.14 12.4 0.3 2.4 1 1 0 1 1 1 0 Cytidylyltransferase-like Acetyltransf_1 PF00583.25 gi|33152334|ref|NP_873687.1| - 0.013 15.7 0.0 0.033 14.4 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.6 gi|33152334|ref|NP_873687.1| - 0.13 12.4 0.0 0.88 9.7 0.0 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase ACP PF06857.11 gi|33152335|ref|NP_873688.1| - 1.2e-27 96.0 1.0 1.3e-27 95.8 1.0 1.1 1 0 0 1 1 1 1 Malonate decarboxylase delta subunit (MdcD) PEX-1N PF09262.11 gi|33152335|ref|NP_873688.1| - 0.026 14.9 0.0 0.035 14.5 0.0 1.3 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal HpcH_HpaI PF03328.14 gi|33152336|ref|NP_873689.1| - 1.9e-81 272.4 0.6 2.8e-81 271.9 0.6 1.2 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|33152336|ref|NP_873689.1| - 1.2e-10 41.1 0.0 4.7e-08 32.6 0.0 2.4 2 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold CitF PF04223.12 gi|33152337|ref|NP_873690.1| - 6.1e-258 856.2 4.0 7e-258 856.0 4.0 1.0 1 0 0 1 1 1 1 Citrate lyase, alpha subunit (CitF) AcetylCoA_hyd_C PF13336.6 gi|33152337|ref|NP_873690.1| - 0.072 13.0 0.2 0.14 12.1 0.2 1.4 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain CitG PF01874.16 gi|33152338|ref|NP_873691.1| - 3.7e-79 266.3 0.0 5.1e-79 265.8 0.0 1.2 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase CitX PF03802.14 gi|33152338|ref|NP_873691.1| - 4.1e-50 169.8 0.2 6.3e-50 169.2 0.2 1.3 1 0 0 1 1 1 1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Na_sulph_symp PF00939.19 gi|33152339|ref|NP_873692.1| - 6.5e-169 562.9 33.9 8.2e-169 562.6 33.9 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 gi|33152339|ref|NP_873692.1| - 1.7e-20 73.4 58.7 8.4e-14 51.4 35.1 2.4 1 1 1 2 2 2 2 Citrate transporter DUF2976 PF11190.8 gi|33152339|ref|NP_873692.1| - 2.1 8.2 7.0 0.26 11.1 1.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2976) malic PF00390.19 gi|33152340|ref|NP_873693.1| - 3.3e-31 108.5 0.1 8.1e-29 100.7 0.1 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|33152340|ref|NP_873693.1| - 1.4e-20 73.7 1.5 8.9e-20 71.0 1.5 2.0 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain Malate_DH PF12434.8 gi|33152340|ref|NP_873693.1| - 0.03 14.3 0.0 0.068 13.2 0.0 1.6 1 0 0 1 1 1 0 Malate dehydrogenase enzyme Ribosomal_L25p PF01386.19 gi|33152342|ref|NP_873695.1| - 4.6e-24 84.7 0.2 5.1e-24 84.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal L25p family DAGK_prokar PF01219.19 gi|33152344|ref|NP_873697.1| - 2.1e-34 117.4 1.0 2.6e-34 117.1 1.0 1.0 1 0 0 1 1 1 1 Prokaryotic diacylglycerol kinase DUF2976 PF11190.8 gi|33152344|ref|NP_873697.1| - 0.093 12.5 3.2 4.2 7.2 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) FtsX PF02687.21 gi|33152344|ref|NP_873697.1| - 0.4 11.2 5.6 1.5 9.4 5.6 1.8 1 1 0 1 1 1 0 FtsX-like permease family SDF PF00375.18 gi|33152345|ref|NP_873698.1| - 8.9e-64 215.9 35.1 1e-63 215.7 35.1 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Competence PF03772.16 gi|33152346|ref|NP_873699.1| - 1.2e-52 178.9 39.2 1.2e-52 178.9 39.2 2.2 2 0 0 2 2 2 1 Competence protein Lactamase_B PF00753.27 gi|33152346|ref|NP_873699.1| - 1.2e-10 41.7 0.0 3.2e-10 40.4 0.0 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|33152346|ref|NP_873699.1| - 0.0027 17.3 0.0 0.0056 16.2 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF4131 PF13567.6 gi|33152346|ref|NP_873699.1| - 0.0074 16.0 8.2 0.0074 16.0 8.2 6.1 2 2 2 5 5 5 1 Domain of unknown function (DUF4131) Lactamase_B_3 PF13483.6 gi|33152346|ref|NP_873699.1| - 0.047 13.6 0.0 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Queuosine_synth PF02547.15 gi|33152347|ref|NP_873700.1| - 7.8e-131 436.0 0.0 8.8e-131 435.9 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein AI-2E_transport PF01594.16 gi|33152348|ref|NP_873701.1| - 6.5e-73 245.7 49.6 7.3e-73 245.6 49.6 1.0 1 0 0 1 1 1 1 AI-2E family transporter Metallophos PF00149.28 gi|33152349|ref|NP_873702.1| - 2.6e-14 54.2 0.1 3.7e-14 53.7 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|33152349|ref|NP_873702.1| - 6.4e-05 23.2 0.0 8.7e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 gi|33152349|ref|NP_873702.1| - 0.026 12.8 0.1 0.2 9.9 0.0 1.9 1 1 1 2 2 2 0 Firmicute fructose-1,6-bisphosphatase RNB PF00773.19 gi|33152350|ref|NP_873703.1| - 2.7e-88 296.4 0.2 5.5e-88 295.4 0.0 1.6 2 0 0 2 2 2 1 RNB domain OB_RNB PF08206.11 gi|33152350|ref|NP_873703.1| - 3.5e-14 52.2 0.8 1e-13 50.8 0.2 2.1 2 0 0 2 2 2 1 Ribonuclease B OB domain S1 PF00575.23 gi|33152350|ref|NP_873703.1| - 3.8e-11 43.2 0.9 2.7e-08 34.0 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain CSD2 PF17876.1 gi|33152350|ref|NP_873703.1| - 3.4e-09 36.7 0.1 3e-06 27.3 0.0 3.7 4 0 0 4 4 4 1 Cold shock domain adh_short_C2 PF13561.6 gi|33152351|ref|NP_873704.1| - 5.7e-85 284.6 0.9 6.5e-85 284.4 0.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|33152351|ref|NP_873704.1| - 7.3e-16 58.2 0.0 9.6e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Methyltransf_25 PF13649.6 gi|33152352|ref|NP_873705.1| - 4.4e-12 46.5 0.0 9.5e-12 45.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33152352|ref|NP_873705.1| - 2.6e-09 37.6 0.0 4.8e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33152352|ref|NP_873705.1| - 4.5e-09 36.3 0.0 1.2e-08 34.9 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152352|ref|NP_873705.1| - 1.2e-06 29.1 0.0 2.1e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152352|ref|NP_873705.1| - 1.3e-05 25.2 0.0 2e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|33152352|ref|NP_873705.1| - 0.00087 18.9 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 gi|33152352|ref|NP_873705.1| - 0.0009 18.6 0.0 0.0015 17.9 0.0 1.3 1 1 0 1 1 1 1 O-methyltransferase domain Methyltransf_4 PF02390.17 gi|33152352|ref|NP_873705.1| - 0.0012 18.3 0.0 0.0021 17.5 0.0 1.6 1 1 0 1 1 1 1 Putative methyltransferase CheR PF01739.18 gi|33152352|ref|NP_873705.1| - 0.0057 16.2 0.0 2.2 7.7 0.0 2.3 1 1 1 2 2 2 2 CheR methyltransferase, SAM binding domain FtsJ PF01728.19 gi|33152352|ref|NP_873705.1| - 0.0082 16.3 0.0 0.022 14.9 0.0 1.4 1 1 0 1 1 1 1 FtsJ-like methyltransferase PrmA PF06325.13 gi|33152352|ref|NP_873705.1| - 0.011 15.2 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) IF-2B PF01008.17 gi|33152352|ref|NP_873705.1| - 0.012 14.9 0.0 0.018 14.2 0.0 1.2 1 0 0 1 1 1 0 Initiation factor 2 subunit family UPF0020 PF01170.18 gi|33152352|ref|NP_873705.1| - 0.013 15.2 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|33152352|ref|NP_873705.1| - 0.019 14.5 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Rsm22 PF09243.10 gi|33152352|ref|NP_873705.1| - 0.025 13.9 0.0 0.071 12.4 0.0 1.6 1 1 1 2 2 2 0 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_18 PF12847.7 gi|33152352|ref|NP_873705.1| - 0.038 13.9 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|33152352|ref|NP_873705.1| - 0.17 11.6 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Abhydrolase_6 PF12697.7 gi|33152353|ref|NP_873706.1| - 4.6e-21 76.4 0.0 5.3e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|33152353|ref|NP_873706.1| - 4.1e-19 69.2 0.2 3.7e-18 66.1 0.2 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 gi|33152353|ref|NP_873706.1| - 1.3e-14 54.5 1.4 8.6e-13 48.5 1.0 2.8 1 1 0 2 2 2 1 PGAP1-like protein Hydrolase_4 PF12146.8 gi|33152353|ref|NP_873706.1| - 1.6e-10 40.7 0.2 2.6e-10 40.0 0.2 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|33152353|ref|NP_873706.1| - 0.00036 19.3 0.4 0.0069 15.1 0.4 2.1 1 1 0 1 1 1 1 Ndr family Thioesterase PF00975.20 gi|33152353|ref|NP_873706.1| - 0.00043 20.5 0.5 0.012 15.8 0.5 2.1 1 1 0 1 1 1 1 Thioesterase domain DUF1057 PF06342.12 gi|33152353|ref|NP_873706.1| - 0.0021 17.1 0.2 0.045 12.8 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1057) Lipase_3 PF01764.25 gi|33152353|ref|NP_873706.1| - 0.0062 16.4 0.4 0.02 14.8 0.1 1.9 1 1 1 2 2 2 1 Lipase (class 3) Esterase PF00756.20 gi|33152353|ref|NP_873706.1| - 0.012 15.3 0.2 0.027 14.1 0.1 1.5 1 1 0 1 1 1 0 Putative esterase Abhydrolase_5 PF12695.7 gi|33152353|ref|NP_873706.1| - 0.013 15.3 0.0 0.032 14.0 0.0 1.6 2 0 0 2 2 2 0 Alpha/beta hydrolase family DUF915 PF06028.11 gi|33152353|ref|NP_873706.1| - 0.019 14.3 0.2 0.24 10.7 0.1 2.6 2 1 1 3 3 3 0 Alpha/beta hydrolase of unknown function (DUF915) LIDHydrolase PF10230.9 gi|33152353|ref|NP_873706.1| - 0.02 14.4 0.4 0.04 13.5 0.4 1.4 1 1 0 1 1 1 0 Lipid-droplet associated hydrolase DLH PF01738.18 gi|33152353|ref|NP_873706.1| - 0.026 14.1 0.0 0.05 13.2 0.0 1.6 1 1 0 1 1 1 0 Dienelactone hydrolase family Chlorophyllase PF07224.11 gi|33152353|ref|NP_873706.1| - 0.032 13.2 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase Peptidase_S9 PF00326.21 gi|33152353|ref|NP_873706.1| - 0.034 13.6 0.0 0.12 11.8 0.0 1.9 1 1 1 2 2 2 0 Prolyl oligopeptidase family Pro_CA PF00484.19 gi|33152353|ref|NP_873706.1| - 0.07 13.4 0.0 0.16 12.2 0.0 1.6 2 0 0 2 2 2 0 Carbonic anhydrase Chlorophyllase2 PF12740.7 gi|33152353|ref|NP_873706.1| - 0.075 11.9 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme Abhydrolase_3 PF07859.13 gi|33152353|ref|NP_873706.1| - 0.076 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|33152353|ref|NP_873706.1| - 0.11 12.4 0.0 0.2 11.6 0.0 1.5 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal SeqA PF03925.13 gi|33152354|ref|NP_873707.1| - 9.2e-42 141.5 0.2 1.6e-41 140.7 0.1 1.5 1 1 1 2 2 2 1 SeqA protein C-terminal domain SeqA_N PF17206.3 gi|33152354|ref|NP_873707.1| - 3.7e-24 83.7 0.3 6.9e-24 82.9 0.3 1.5 1 0 0 1 1 1 1 SeqA protein N-terminal domain VAPB_antitox PF02697.14 gi|33152354|ref|NP_873707.1| - 0.028 15.2 0.2 0.074 13.8 0.2 1.8 1 1 0 1 1 1 0 Putative antitoxin AMP-binding PF00501.28 gi|33152355|ref|NP_873708.1| - 5.8e-50 170.1 0.0 1.1e-48 165.9 0.0 2.0 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|33152355|ref|NP_873708.1| - 0.00015 22.7 0.0 0.00034 21.5 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Herpes_UL20 PF04544.12 gi|33152355|ref|NP_873708.1| - 0.12 12.7 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 Chorismate_synt PF01264.21 gi|33152356|ref|NP_873709.1| - 1.5e-143 477.4 0.0 1.7e-143 477.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Nfu_N PF08712.11 gi|33152356|ref|NP_873709.1| - 0.16 12.0 0.0 0.38 10.8 0.0 1.6 1 0 0 1 1 1 0 Scaffold protein Nfu/NifU N terminal Peptidase_M74 PF03411.13 gi|33152357|ref|NP_873710.1| - 7.1e-95 317.1 0.0 8.2e-95 316.9 0.0 1.0 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase Topoisom_bac PF01131.20 gi|33152358|ref|NP_873711.1| - 7.2e-109 364.5 0.2 1.3e-108 363.7 0.2 1.3 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|33152358|ref|NP_873711.1| - 2e-14 53.7 0.0 9.8e-14 51.4 0.0 2.3 1 0 0 1 1 1 1 Toprim domain FYRC PF05965.14 gi|33152358|ref|NP_873711.1| - 0.084 13.0 0.0 1.2 9.4 0.0 2.6 2 0 0 2 2 2 0 F/Y rich C-terminus SecG PF03840.14 gi|33152359|ref|NP_873712.1| - 4.4e-21 74.7 10.8 6.3e-21 74.2 10.8 1.2 1 0 0 1 1 1 1 Preprotein translocase SecG subunit DUF4013 PF13197.6 gi|33152359|ref|NP_873712.1| - 0.0007 19.5 2.1 0.00082 19.3 2.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) DUF3098 PF11297.8 gi|33152359|ref|NP_873712.1| - 0.074 12.7 0.7 0.074 12.7 0.7 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) Rhomboid PF01694.22 gi|33152359|ref|NP_873712.1| - 0.44 10.5 6.0 0.73 9.8 6.0 1.4 1 1 0 1 1 1 0 Rhomboid family RseC_MucC PF04246.12 gi|33152359|ref|NP_873712.1| - 2.1 8.3 4.0 44 4.0 4.0 2.1 1 1 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Peptidase_S8 PF00082.22 gi|33152360|ref|NP_873713.1| - 7.4e-22 78.0 0.0 2.2e-21 76.4 0.0 1.7 1 1 0 1 1 1 1 Subtilase family Autotransporter PF03797.19 gi|33152361|ref|NP_873714.1| - 1.2e-38 133.2 16.6 1.2e-38 133.2 16.6 2.5 2 1 1 3 3 3 1 Autotransporter beta-domain PATR PF12951.7 gi|33152361|ref|NP_873714.1| - 1.3e-07 31.6 0.7 4.5e-07 29.9 0.7 2.0 1 0 0 1 1 1 1 Passenger-associated-transport-repeat FTHFS PF01268.19 gi|33152362|ref|NP_873715.1| - 9.2e-264 875.8 5.3 1e-263 875.6 5.3 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase CbiA PF01656.23 gi|33152362|ref|NP_873715.1| - 0.039 14.0 0.0 0.53 10.3 0.0 2.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain CxxCxxCC PF03692.15 gi|33152364|ref|NP_873717.1| - 1.5e-05 25.6 8.8 3.5e-05 24.4 8.8 1.6 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain SSB PF00436.25 gi|33152365|ref|NP_873718.1| - 1.3e-42 144.1 1.3 2e-42 143.5 1.3 1.3 1 0 0 1 1 1 1 Single-strand binding protein family Glyco_hydro_42M PF08532.10 gi|33152365|ref|NP_873718.1| - 0.093 12.2 1.5 0.39 10.2 0.2 1.9 1 1 1 2 2 2 0 Beta-galactosidase trimerisation domain tRNA_anti-codon PF01336.25 gi|33152365|ref|NP_873718.1| - 0.096 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain DUF5342 PF17277.2 gi|33152365|ref|NP_873718.1| - 0.14 12.5 1.9 0.23 11.8 0.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5342) UvrA_inter PF17760.1 gi|33152366|ref|NP_873719.1| - 3.3e-37 126.9 0.1 1.1e-36 125.1 0.0 2.0 2 0 0 2 2 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|33152366|ref|NP_873719.1| - 1.3e-34 118.9 0.0 3.3e-33 114.3 0.0 2.9 3 0 0 3 3 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|33152366|ref|NP_873719.1| - 6.6e-20 72.0 0.5 8.1e-05 23.2 0.0 4.4 4 0 0 4 4 4 4 ABC transporter SMC_N PF02463.19 gi|33152366|ref|NP_873719.1| - 2e-12 47.0 0.0 0.03 13.8 0.0 4.2 4 0 0 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|33152366|ref|NP_873719.1| - 8e-08 31.9 0.1 0.0016 18.1 0.0 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|33152366|ref|NP_873719.1| - 1.7e-07 31.8 1.2 0.046 14.1 0.0 3.9 3 2 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|33152366|ref|NP_873719.1| - 6e-06 26.3 0.0 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 gi|33152366|ref|NP_873719.1| - 2.9e-05 24.3 0.2 0.7 10.2 0.0 3.6 4 0 0 4 4 3 2 AAA domain AAA_23 PF13476.6 gi|33152366|ref|NP_873719.1| - 5.8e-05 23.7 11.6 0.037 14.5 0.2 3.4 3 0 0 3 3 3 2 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|33152366|ref|NP_873719.1| - 0.00011 22.4 4.4 0.017 15.5 0.2 3.6 3 1 0 3 3 3 1 DnaJ central domain AAA_25 PF13481.6 gi|33152366|ref|NP_873719.1| - 0.00033 20.3 0.0 0.19 11.3 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|33152366|ref|NP_873719.1| - 0.00034 21.1 0.1 2.3 8.8 0.0 3.1 3 0 0 3 3 2 2 AAA domain AAA_21 PF13304.6 gi|33152366|ref|NP_873719.1| - 0.0007 19.5 6.7 0.22 11.3 0.0 4.2 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 gi|33152366|ref|NP_873719.1| - 0.0011 18.6 0.2 0.17 11.5 0.0 2.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 gi|33152366|ref|NP_873719.1| - 0.0023 17.8 0.0 0.89 9.4 0.0 2.7 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_14 PF13173.6 gi|33152366|ref|NP_873719.1| - 0.0024 17.9 0.2 8.5 6.4 0.0 4.3 5 1 0 5 5 4 0 AAA domain AAA_33 PF13671.6 gi|33152366|ref|NP_873719.1| - 0.0024 18.0 0.0 2.9 8.0 0.0 3.0 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|33152366|ref|NP_873719.1| - 0.0027 17.7 0.7 1.2 9.0 0.0 3.5 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|33152366|ref|NP_873719.1| - 0.0044 16.9 0.0 1 9.2 0.0 2.5 2 0 0 2 2 2 1 NACHT domain AAA_24 PF13479.6 gi|33152366|ref|NP_873719.1| - 0.0059 16.3 0.2 2.6 7.7 0.0 3.3 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 gi|33152366|ref|NP_873719.1| - 0.006 16.4 0.0 0.23 11.1 0.0 2.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|33152366|ref|NP_873719.1| - 0.0064 16.2 0.0 9.1 5.9 0.0 3.3 3 0 0 3 3 3 0 AAA domain DUF2075 PF09848.9 gi|33152366|ref|NP_873719.1| - 0.0094 15.2 0.0 1.3 8.2 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) MMR_HSR1 PF01926.23 gi|33152366|ref|NP_873719.1| - 0.028 14.5 0.0 2.7 8.1 0.0 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase ATPase PF06745.13 gi|33152366|ref|NP_873719.1| - 0.043 13.2 0.0 8 5.7 0.0 2.4 2 0 0 2 2 2 0 KaiC AAA_28 PF13521.6 gi|33152366|ref|NP_873719.1| - 0.062 13.5 0.1 20 5.4 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|33152366|ref|NP_873719.1| - 0.064 12.8 0.0 13 5.2 0.0 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region T2SSE PF00437.20 gi|33152366|ref|NP_873719.1| - 0.07 12.2 0.1 15 4.6 0.0 2.6 2 0 0 2 2 2 0 Type II/IV secretion system protein Sigma54_activat PF00158.26 gi|33152366|ref|NP_873719.1| - 0.086 12.5 0.0 6.2 6.5 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF3987 PF13148.6 gi|33152366|ref|NP_873719.1| - 0.11 11.4 0.1 1.2 8.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) NTPase_1 PF03266.15 gi|33152366|ref|NP_873719.1| - 0.13 12.2 0.5 5.1 7.0 0.0 3.1 3 0 0 3 3 3 0 NTPase Sec34 PF04136.15 gi|33152366|ref|NP_873719.1| - 0.13 12.1 0.3 0.7 9.8 0.1 2.2 2 1 0 2 2 2 0 Sec34-like family BCA_ABC_TP_C PF12399.8 gi|33152366|ref|NP_873719.1| - 1.2 9.1 9.4 0.99 9.4 0.2 3.5 3 0 0 3 3 3 0 Branched-chain amino acid ATP-binding cassette transporter Anti-TRAP PF15777.5 gi|33152366|ref|NP_873719.1| - 1.3 9.1 6.8 1.3 9.0 0.5 3.0 3 0 0 3 3 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein Zn-ribbon_8 PF09723.10 gi|33152366|ref|NP_873719.1| - 3.9 7.7 8.5 2.3 8.4 0.5 3.0 3 0 0 3 3 2 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 gi|33152366|ref|NP_873719.1| - 3.9 7.3 5.6 15 5.5 0.1 3.3 3 0 0 3 3 3 0 Rubredoxin metal binding domain Helicase_C_2 PF13307.6 gi|33152367|ref|NP_873720.1| - 1.4e-36 126.2 0.0 2.6e-36 125.4 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD PF00270.29 gi|33152367|ref|NP_873720.1| - 5.4e-08 32.8 0.6 2.8e-05 23.9 0.1 3.2 4 0 0 4 4 4 2 DEAD/DEAH box helicase DEAD_2 PF06733.15 gi|33152367|ref|NP_873720.1| - 0.00038 20.1 0.0 0.00074 19.2 0.0 1.5 1 0 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|33152367|ref|NP_873720.1| - 0.0016 18.5 0.1 0.042 13.8 0.1 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|33152367|ref|NP_873720.1| - 0.0018 18.6 0.0 0.0073 16.6 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain T4SS-DNA_transf PF02534.14 gi|33152367|ref|NP_873720.1| - 0.0072 15.2 0.1 0.011 14.6 0.1 1.2 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer DUF2408 PF10303.9 gi|33152367|ref|NP_873720.1| - 0.027 15.0 0.6 0.061 13.9 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) DUF2075 PF09848.9 gi|33152367|ref|NP_873720.1| - 0.15 11.3 2.7 0.21 10.8 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) LrgA PF03788.14 gi|33152368|ref|NP_873721.1| - 1.1e-15 57.3 4.8 1.3e-15 57.1 4.8 1.0 1 0 0 1 1 1 1 LrgA family DUF3894 PF13033.6 gi|33152368|ref|NP_873721.1| - 0.2 11.8 4.0 0.095 12.8 1.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3894) PEP-CTERM PF07589.11 gi|33152368|ref|NP_873721.1| - 1.5 9.0 0.0 1.5 9.0 0.0 2.6 3 0 0 3 3 3 0 PEP-CTERM motif LrgB PF04172.16 gi|33152369|ref|NP_873722.1| - 2.8e-65 219.8 17.2 3.2e-65 219.6 17.2 1.0 1 0 0 1 1 1 1 LrgB-like family TauE PF01925.19 gi|33152369|ref|NP_873722.1| - 0.037 13.7 22.7 0.0094 15.6 19.0 1.9 1 1 1 2 2 2 0 Sulfite exporter TauE/SafE SelR PF01641.18 gi|33152370|ref|NP_873723.1| - 1.2e-46 157.7 0.0 1.4e-46 157.6 0.0 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|33152370|ref|NP_873723.1| - 0.015 15.5 0.4 0.057 13.6 0.4 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zinc_ribbon_4 PF13717.6 gi|33152370|ref|NP_873723.1| - 0.017 15.0 0.3 1.1 9.3 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|33152370|ref|NP_873723.1| - 0.038 14.0 1.6 1.3 9.1 0.0 2.4 2 1 0 2 2 2 0 Double zinc ribbon zinc_ribbon_10 PF10058.9 gi|33152370|ref|NP_873723.1| - 0.061 13.1 0.3 7.2 6.4 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_ribbon_SprT PF17283.2 gi|33152370|ref|NP_873723.1| - 0.13 12.1 9.5 2.6 8.0 9.5 2.2 1 1 0 1 1 1 0 SprT-like zinc ribbon domain HECT_2 PF09814.9 gi|33152370|ref|NP_873723.1| - 0.14 11.0 0.0 2.9 6.7 0.0 2.0 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding Ribosomal_L37e PF01907.19 gi|33152370|ref|NP_873723.1| - 1.5 9.0 5.9 1 9.5 0.9 2.2 2 0 0 2 2 2 0 Ribosomal protein L37e Gp_dh_C PF02800.20 gi|33152371|ref|NP_873724.1| - 1.1e-69 233.0 0.2 1.6e-69 232.5 0.2 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 gi|33152371|ref|NP_873724.1| - 8.9e-40 135.1 0.4 1.9e-39 134.1 0.4 1.5 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|33152371|ref|NP_873724.1| - 0.023 14.8 2.5 0.046 13.9 0.8 2.4 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus MreB_Mbl PF06723.13 gi|33152372|ref|NP_873725.1| - 2.5e-143 476.8 7.9 3.1e-143 476.5 7.9 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 gi|33152372|ref|NP_873725.1| - 2.9e-13 48.9 0.7 3.1e-13 48.8 0.1 1.4 2 0 0 2 2 2 1 Hsp70 protein Actin PF00022.19 gi|33152372|ref|NP_873725.1| - 1.4e-10 40.4 0.1 1.6e-06 27.0 0.0 2.2 1 1 1 2 2 2 2 Actin FtsA PF14450.6 gi|33152372|ref|NP_873725.1| - 2.4e-10 40.7 1.5 3.5e-10 40.2 0.2 1.9 2 0 0 2 2 2 1 Cell division protein FtsA PilM_2 PF11104.8 gi|33152372|ref|NP_873725.1| - 3.6e-07 29.5 0.1 0.0029 16.7 0.0 2.4 2 1 0 2 2 2 2 Type IV pilus assembly protein PilM; EutA PF06277.11 gi|33152372|ref|NP_873725.1| - 0.0014 17.5 0.1 0.0025 16.8 0.1 1.4 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA Ppx-GppA PF02541.16 gi|33152372|ref|NP_873725.1| - 0.0032 16.9 0.1 0.0055 16.2 0.1 1.5 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DDR PF08841.10 gi|33152372|ref|NP_873725.1| - 0.0044 16.0 0.4 0.0044 16.0 0.4 1.6 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain HGD-D PF06050.13 gi|33152372|ref|NP_873725.1| - 0.16 11.7 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component StbA PF06406.11 gi|33152372|ref|NP_873725.1| - 0.16 11.1 0.3 0.25 10.5 0.3 1.6 1 1 0 1 1 1 0 StbA protein MreC PF04085.14 gi|33152373|ref|NP_873726.1| - 3.2e-36 124.5 0.2 5.5e-36 123.7 0.2 1.4 1 0 0 1 1 1 1 rod shape-determining protein MreC MreD PF04093.12 gi|33152374|ref|NP_873727.1| - 1.1e-36 126.3 26.2 1.3e-36 126.1 26.2 1.0 1 0 0 1 1 1 1 rod shape-determining protein MreD MgsA_C PF12002.8 gi|33152375|ref|NP_873728.1| - 9.1e-66 220.9 3.9 1.4e-65 220.3 3.9 1.3 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal AAA_assoc_2 PF16193.5 gi|33152375|ref|NP_873728.1| - 1.2e-21 76.8 0.1 3.7e-21 75.3 0.1 1.9 1 0 0 1 1 1 1 AAA C-terminal domain AAA PF00004.29 gi|33152375|ref|NP_873728.1| - 2.5e-17 63.6 0.1 2.9e-16 60.1 0.0 2.2 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|33152375|ref|NP_873728.1| - 1.4e-15 57.4 0.0 2.4e-15 56.6 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|33152375|ref|NP_873728.1| - 1.9e-08 34.4 0.0 1.3e-07 31.7 0.0 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|33152375|ref|NP_873728.1| - 1.1e-06 29.0 0.3 0.0067 16.7 0.0 3.2 1 1 2 3 3 3 2 AAA domain Mg_chelatase PF01078.21 gi|33152375|ref|NP_873728.1| - 1.4e-06 27.9 0.1 0.00057 19.3 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 gi|33152375|ref|NP_873728.1| - 1.8e-06 28.0 0.0 5.7e-06 26.4 0.0 1.8 2 0 0 2 2 1 1 AAA domain Sigma54_activat PF00158.26 gi|33152375|ref|NP_873728.1| - 4.1e-06 26.6 0.0 0.034 13.9 0.0 2.6 1 1 1 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 gi|33152375|ref|NP_873728.1| - 4.6e-06 27.1 0.1 0.0028 18.1 0.0 2.9 2 1 1 3 3 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|33152375|ref|NP_873728.1| - 2e-05 24.4 0.0 0.00032 20.5 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|33152375|ref|NP_873728.1| - 2.3e-05 24.8 0.1 0.011 16.0 0.0 2.6 2 1 1 3 3 2 1 AAA domain ResIII PF04851.15 gi|33152375|ref|NP_873728.1| - 0.00018 21.6 2.4 0.079 13.0 0.0 3.4 3 1 1 4 4 4 1 Type III restriction enzyme, res subunit Sigma54_activ_2 PF14532.6 gi|33152375|ref|NP_873728.1| - 0.00018 21.6 0.0 0.00041 20.5 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_3 PF07726.11 gi|33152375|ref|NP_873728.1| - 0.00025 20.9 0.0 0.00081 19.3 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|33152375|ref|NP_873728.1| - 0.0006 19.6 0.0 0.057 13.2 0.0 2.3 1 1 1 2 2 2 1 DNA polymerase III, delta subunit IstB_IS21 PF01695.17 gi|33152375|ref|NP_873728.1| - 0.00067 19.4 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein DUF815 PF05673.13 gi|33152375|ref|NP_873728.1| - 0.0019 17.4 0.0 0.0032 16.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|33152375|ref|NP_873728.1| - 0.0019 18.3 0.0 0.0038 17.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_18 PF13238.6 gi|33152375|ref|NP_873728.1| - 0.0023 18.5 0.0 0.006 17.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|33152375|ref|NP_873728.1| - 0.003 17.7 0.0 0.0063 16.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|33152375|ref|NP_873728.1| - 0.0031 17.8 0.1 0.013 15.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|33152375|ref|NP_873728.1| - 0.0064 17.0 0.1 0.02 15.4 0.0 1.9 2 1 0 2 2 2 1 ABC transporter ATPase_2 PF01637.18 gi|33152375|ref|NP_873728.1| - 0.0069 16.3 0.1 0.068 13.1 0.1 2.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_11 PF13086.6 gi|33152375|ref|NP_873728.1| - 0.0098 15.7 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|33152375|ref|NP_873728.1| - 0.013 15.2 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|33152375|ref|NP_873728.1| - 0.019 15.3 0.0 0.042 14.2 0.0 1.6 1 0 0 1 1 1 0 RNA helicase T2SSE PF00437.20 gi|33152375|ref|NP_873728.1| - 0.023 13.7 0.0 0.048 12.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|33152375|ref|NP_873728.1| - 0.026 14.5 0.1 0.27 11.1 0.0 2.4 2 1 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 gi|33152375|ref|NP_873728.1| - 0.034 14.6 0.0 0.083 13.3 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|33152375|ref|NP_873728.1| - 0.037 13.5 0.0 0.2 11.1 0.0 2.1 1 1 0 1 1 1 0 P-loop containing dynein motor region Parvo_NS1 PF01057.17 gi|33152375|ref|NP_873728.1| - 0.047 12.8 0.0 0.41 9.7 0.1 2.2 2 1 0 2 2 2 0 Parvovirus non-structural protein NS1 KTI12 PF08433.10 gi|33152375|ref|NP_873728.1| - 0.058 12.8 0.0 0.22 10.9 0.0 1.9 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_25 PF13481.6 gi|33152375|ref|NP_873728.1| - 0.094 12.3 0.0 0.26 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|33152375|ref|NP_873728.1| - 0.098 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 gi|33152375|ref|NP_873728.1| - 0.1 11.7 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|33152375|ref|NP_873728.1| - 0.11 12.4 0.0 0.3 11.0 0.0 1.7 1 1 1 2 2 2 0 RsgA GTPase MeaB PF03308.16 gi|33152375|ref|NP_873728.1| - 0.19 10.7 0.0 0.42 9.6 0.0 1.5 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC-3 PF00950.17 gi|33152376|ref|NP_873729.1| - 9.8e-79 264.5 25.5 1.1e-78 264.3 25.5 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|33152376|ref|NP_873729.1| - 3.4e-08 32.9 26.1 3.4e-08 32.9 26.1 1.4 1 1 0 1 1 1 1 FecCD transport family VWA_2 PF13519.6 gi|33152377|ref|NP_873730.1| - 0.00013 22.6 0.4 0.31 11.7 0.0 3.5 3 0 0 3 3 3 2 von Willebrand factor type A domain TadF PF16964.5 gi|33152377|ref|NP_873730.1| - 0.0012 18.6 0.1 0.0041 16.9 0.1 1.9 1 0 0 1 1 1 1 Putative tight adherence pilin protein F Tad PF13400.6 gi|33152377|ref|NP_873730.1| - 0.019 15.3 0.4 0.037 14.3 0.4 1.4 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Mannitol_dh_C PF08125.13 gi|33152377|ref|NP_873730.1| - 0.056 12.9 0.0 0.096 12.1 0.0 1.3 1 0 0 1 1 1 0 Mannitol dehydrogenase C-terminal domain TadF PF16964.5 gi|33152378|ref|NP_873731.1| - 1.3e-63 214.1 0.5 1.5e-63 213.9 0.5 1.0 1 0 0 1 1 1 1 Putative tight adherence pilin protein F TadE PF07811.12 gi|33152379|ref|NP_873732.1| - 1.3e-06 28.5 3.6 2e-06 27.9 3.6 1.3 1 0 0 1 1 1 1 TadE-like protein TPR_2 PF07719.17 gi|33152380|ref|NP_873733.1| - 2.5e-09 36.5 0.3 0.0011 18.9 0.1 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|33152380|ref|NP_873733.1| - 1.2e-08 35.4 0.0 5.5e-08 33.3 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|33152380|ref|NP_873733.1| - 6.9e-07 29.2 1.6 0.0051 17.1 0.1 4.6 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33152380|ref|NP_873733.1| - 4.8e-06 27.0 3.6 0.003 18.0 1.0 3.2 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33152380|ref|NP_873733.1| - 0.00015 22.0 3.8 0.35 11.2 0.4 3.7 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|33152380|ref|NP_873733.1| - 0.00024 21.3 1.4 0.0037 17.5 0.2 2.9 1 1 2 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 gi|33152380|ref|NP_873733.1| - 0.00029 20.8 10.6 1.3 9.5 0.0 5.5 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33152380|ref|NP_873733.1| - 0.00049 19.8 3.1 0.076 12.9 0.1 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33152380|ref|NP_873733.1| - 0.0029 18.1 0.5 48 4.9 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 gi|33152380|ref|NP_873733.1| - 0.0065 16.4 0.1 0.15 12.0 0.1 2.5 1 1 2 3 3 3 1 Virulence factor membrane-bound polymerase, C-terminal TPR_14 PF13428.6 gi|33152380|ref|NP_873733.1| - 0.026 15.3 0.1 1 10.4 0.0 3.1 2 2 2 4 4 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|33152380|ref|NP_873733.1| - 0.037 14.1 0.0 0.13 12.4 0.0 1.9 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat PknG_TPR PF16918.5 gi|33152380|ref|NP_873733.1| - 0.11 11.2 0.0 0.17 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat TPR_10 PF13374.6 gi|33152380|ref|NP_873733.1| - 0.73 9.8 6.7 11 6.0 0.5 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|33152380|ref|NP_873733.1| - 1.4 8.6 5.8 0.66 9.7 0.1 3.3 4 1 0 4 4 4 0 TPR repeat T2SSF PF00482.23 gi|33152381|ref|NP_873734.1| - 1.4e-15 57.4 3.0 1.4e-15 57.4 3.0 2.9 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F YajC PF02699.15 gi|33152381|ref|NP_873734.1| - 0.13 12.1 0.2 0.13 12.1 0.2 2.6 3 0 0 3 3 3 0 Preprotein translocase subunit TMEM169 PF15052.6 gi|33152381|ref|NP_873734.1| - 5.8 7.0 13.3 28 4.9 0.0 4.0 3 2 2 5 5 5 0 TMEM169 protein family T2SSF PF00482.23 gi|33152382|ref|NP_873735.1| - 8.9e-21 74.1 0.1 8.9e-21 74.1 0.1 1.8 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F Spore_III_AB PF09548.10 gi|33152382|ref|NP_873735.1| - 0.0036 17.4 0.1 0.014 15.5 0.0 1.9 2 0 0 2 2 2 1 Stage III sporulation protein AB (spore_III_AB) Mt_ATP-synt_B PF05405.14 gi|33152382|ref|NP_873735.1| - 0.12 12.0 0.0 0.12 12.0 0.0 2.5 3 0 0 3 3 3 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) T2SSE PF00437.20 gi|33152383|ref|NP_873736.1| - 4e-78 262.2 2.5 6e-78 261.6 2.5 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|33152383|ref|NP_873736.1| - 0.00023 20.5 0.0 0.00043 19.6 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_29 PF13555.6 gi|33152383|ref|NP_873736.1| - 0.00054 19.6 0.1 0.0012 18.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|33152383|ref|NP_873736.1| - 0.00076 20.0 0.3 0.0024 18.4 0.3 2.0 1 1 0 1 1 1 1 ABC transporter FtsK_SpoIIIE PF01580.18 gi|33152383|ref|NP_873736.1| - 0.0013 18.1 0.1 0.0036 16.7 0.1 1.7 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_28 PF13521.6 gi|33152383|ref|NP_873736.1| - 0.0017 18.6 0.1 0.0032 17.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152383|ref|NP_873736.1| - 0.0019 18.6 0.0 0.0043 17.4 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|33152383|ref|NP_873736.1| - 0.0057 17.2 0.1 0.014 15.9 0.1 1.7 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|33152383|ref|NP_873736.1| - 0.0085 15.7 0.1 0.066 12.8 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Mg_chelatase PF01078.21 gi|33152383|ref|NP_873736.1| - 0.0086 15.5 0.0 0.028 13.8 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 gi|33152383|ref|NP_873736.1| - 0.025 14.9 0.6 0.068 13.5 0.6 1.8 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|33152383|ref|NP_873736.1| - 0.03 14.1 0.0 0.1 12.4 0.0 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|33152383|ref|NP_873736.1| - 0.041 13.6 0.0 0.075 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|33152383|ref|NP_873736.1| - 0.055 14.0 0.0 0.17 12.5 0.0 1.9 1 0 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|33152383|ref|NP_873736.1| - 0.072 12.3 0.0 0.92 8.7 0.0 2.1 2 0 0 2 2 2 0 KAP family P-loop domain NACHT PF05729.12 gi|33152383|ref|NP_873736.1| - 0.077 12.9 0.0 0.21 11.5 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Anthrax_toxA PF03497.16 gi|33152383|ref|NP_873736.1| - 0.097 12.8 0.3 0.44 10.7 0.1 2.2 2 1 1 3 3 3 0 Anthrax toxin LF subunit G-alpha PF00503.20 gi|33152383|ref|NP_873736.1| - 0.1 11.8 0.8 0.26 10.4 0.2 2.1 2 1 0 2 2 2 0 G-protein alpha subunit DUF2075 PF09848.9 gi|33152383|ref|NP_873736.1| - 0.1 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) CbiA PF01656.23 gi|33152383|ref|NP_873736.1| - 0.11 12.6 0.0 0.25 11.4 0.0 1.7 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|33152384|ref|NP_873737.1| - 0.065 12.7 0.6 0.13 11.6 0.6 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|33152384|ref|NP_873737.1| - 0.49 10.3 4.1 11 5.8 0.3 2.8 2 1 0 3 3 3 0 AAA domain RcpB PF16971.5 gi|33152385|ref|NP_873738.1| - 4.8e-75 251.0 1.8 5.3e-75 250.9 1.8 1.0 1 0 0 1 1 1 1 Rough colony protein B, tight adherence - tad - subunit Secretin PF00263.21 gi|33152386|ref|NP_873739.1| - 7.9e-37 126.5 0.2 7.9e-37 126.5 0.2 2.0 3 0 0 3 3 3 1 Bacterial type II and III secretion system protein T2SS-T3SS_pil_N PF13629.6 gi|33152386|ref|NP_873739.1| - 7.5e-18 64.0 0.0 1.5e-17 63.1 0.0 1.6 1 0 0 1 1 1 1 Pilus formation protein N terminal region RcpC PF16976.5 gi|33152387|ref|NP_873740.1| - 4.4e-06 26.7 0.1 3.2e-05 23.9 0.0 2.1 2 0 0 2 2 2 1 Flp pilus assembly protein RcpC/CpaB SAF PF08666.12 gi|33152387|ref|NP_873740.1| - 5.3e-06 27.0 0.0 9.2e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 SAF domain Peptidase_A24 PF01478.18 gi|33152388|ref|NP_873741.1| - 8.8e-14 51.8 13.2 8.8e-14 51.8 13.2 1.4 1 1 0 1 1 1 1 Type IV leader peptidase family Thi4 PF01946.17 gi|33152388|ref|NP_873741.1| - 0.072 12.3 0.6 0.1 11.9 0.6 1.1 1 0 0 1 1 1 0 Thi4 family Flp_Fap PF04964.14 gi|33152389|ref|NP_873742.1| - 5.1e-16 58.2 2.3 7.4e-16 57.7 2.3 1.3 1 0 0 1 1 1 1 Flp/Fap pilin component Flp_Fap PF04964.14 gi|33152390|ref|NP_873743.1| - 2.2e-19 69.0 1.0 3.5e-19 68.4 1.0 1.3 1 0 0 1 1 1 1 Flp/Fap pilin component TadF PF16964.5 gi|33152390|ref|NP_873743.1| - 0.064 13.0 0.2 0.076 12.8 0.2 1.1 1 0 0 1 1 1 0 Putative tight adherence pilin protein F DUF4259 PF14078.6 gi|33152390|ref|NP_873743.1| - 0.15 12.8 0.0 0.16 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4259) N_methyl PF07963.12 gi|33152390|ref|NP_873743.1| - 4 7.1 7.0 23 4.7 0.0 2.7 3 0 0 3 3 3 0 Prokaryotic N-terminal methylation motif Flp_Fap PF04964.14 gi|33152391|ref|NP_873744.1| - 2.2e-19 69.0 1.0 4e-19 68.2 1.0 1.4 1 0 0 1 1 1 1 Flp/Fap pilin component TadF PF16964.5 gi|33152391|ref|NP_873744.1| - 0.067 12.9 0.2 0.076 12.8 0.2 1.2 1 0 0 1 1 1 0 Putative tight adherence pilin protein F DUF4259 PF14078.6 gi|33152391|ref|NP_873744.1| - 0.16 12.7 0.0 0.16 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4259) N_methyl PF07963.12 gi|33152391|ref|NP_873744.1| - 4.8 6.9 7.0 25 4.7 0.0 2.7 3 0 0 3 3 3 0 Prokaryotic N-terminal methylation motif DUF218 PF02698.17 gi|33152395|ref|NP_873748.1| - 1.1e-17 64.3 0.0 1.7e-17 63.7 0.0 1.3 1 0 0 1 1 1 1 DUF218 domain Zip PF02535.22 gi|33152395|ref|NP_873748.1| - 0.22 10.7 0.0 0.26 10.5 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1375 PF07119.12 gi|33152396|ref|NP_873749.1| - 2.7e-06 27.7 5.9 7.6e-05 23.0 5.9 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1375) tRNA-synt_2 PF00152.20 gi|33152397|ref|NP_873750.1| - 3.7e-79 266.1 0.0 5.3e-79 265.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|33152397|ref|NP_873750.1| - 3.8e-14 52.4 0.7 7.5e-14 51.5 0.7 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|33152397|ref|NP_873750.1| - 2.9e-05 23.7 0.5 0.19 11.2 0.1 3.2 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) Spermine_synth PF01564.17 gi|33152398|ref|NP_873751.1| - 1.7e-06 27.6 0.0 2.1e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase domain MTS PF05175.14 gi|33152398|ref|NP_873751.1| - 8.2e-06 25.5 0.0 1.2e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|33152398|ref|NP_873751.1| - 2e-05 25.2 0.0 6.2e-05 23.6 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152398|ref|NP_873751.1| - 9.8e-05 22.2 0.0 0.00012 21.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33152398|ref|NP_873751.1| - 0.00098 19.7 0.0 0.0017 19.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152398|ref|NP_873751.1| - 0.0066 17.2 0.0 0.012 16.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33152398|ref|NP_873751.1| - 0.13 12.0 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain BRCT PF00533.26 gi|33152399|ref|NP_873752.1| - 0.049 14.0 0.0 1.3 9.5 0.0 2.3 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain ORMDL PF04061.14 gi|33152399|ref|NP_873752.1| - 0.11 12.3 5.3 0.67 9.8 5.3 2.1 1 1 0 1 1 1 0 ORMDL family TMCCDC2 PF15844.5 gi|33152399|ref|NP_873752.1| - 0.2 11.5 3.0 0.17 11.8 0.5 2.0 2 0 0 2 2 2 0 Transmembrane and coiled-coil domain-containing protein 2 DUF1129 PF06570.11 gi|33152399|ref|NP_873752.1| - 4.2 6.8 10.4 0.3 10.6 3.2 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1129) MFS_1 PF07690.16 gi|33152400|ref|NP_873753.1| - 1.4e-08 34.1 16.0 1.7e-08 33.8 16.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF373 PF04123.13 gi|33152400|ref|NP_873753.1| - 0.2 11.0 15.1 0.26 10.7 15.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) polyprenyl_synt PF00348.17 gi|33152401|ref|NP_873754.1| - 4.2e-56 189.9 0.8 5.2e-56 189.6 0.8 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Exonuc_VII_S PF02609.16 gi|33152402|ref|NP_873755.1| - 3.9e-19 68.4 1.9 5.1e-19 68.1 1.9 1.2 1 0 0 1 1 1 1 Exonuclease VII small subunit TACC_C PF05010.14 gi|33152402|ref|NP_873755.1| - 0.0033 17.2 3.7 0.0034 17.2 3.7 1.0 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal FOXP-CC PF16159.5 gi|33152402|ref|NP_873755.1| - 0.0045 17.6 1.0 0.0058 17.2 1.0 1.1 1 0 0 1 1 1 1 FOXP coiled-coil domain Lebercilin PF15619.6 gi|33152402|ref|NP_873755.1| - 0.0068 16.1 4.7 0.0073 16.0 4.7 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DASH_Dad2 PF08654.10 gi|33152402|ref|NP_873755.1| - 0.023 15.1 0.6 0.026 14.9 0.6 1.0 1 0 0 1 1 1 0 DASH complex subunit Dad2 DUF2802 PF10975.8 gi|33152402|ref|NP_873755.1| - 0.03 14.5 5.4 0.047 13.8 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2802) Sugarporin_N PF11471.8 gi|33152402|ref|NP_873755.1| - 2.7 8.0 6.8 4 7.5 5.9 1.9 1 1 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Sulfatase PF00884.23 gi|33152404|ref|NP_873757.1| - 1.4e-43 149.5 0.2 1.8e-43 149.1 0.2 1.1 1 0 0 1 1 1 1 Sulfatase DUF4013 PF13197.6 gi|33152404|ref|NP_873757.1| - 0.87 9.4 12.9 0.29 11.0 9.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4013) ShlB PF03865.13 gi|33152405|ref|NP_873758.1| - 5.3e-75 252.7 9.5 7.4e-75 252.3 9.5 1.2 1 0 0 1 1 1 1 Haemolysin secretion/activation protein ShlB/FhaC/HecB POTRA_2 PF08479.11 gi|33152405|ref|NP_873758.1| - 3e-15 55.8 0.1 7.3e-13 48.2 0.0 2.6 2 0 0 2 2 2 2 POTRA domain, ShlB-type POTRA_3 PF17287.2 gi|33152405|ref|NP_873758.1| - 0.00028 20.3 0.1 0.0007 19.0 0.1 1.6 1 0 0 1 1 1 1 POTRA domain POTRA PF07244.15 gi|33152405|ref|NP_873758.1| - 0.0038 17.8 0.6 0.047 14.3 0.0 3.0 3 0 0 3 3 3 1 Surface antigen variable number repeat Haemagg_act PF05860.13 gi|33152406|ref|NP_873759.1| - 1.4e-31 108.8 5.6 1.4e-31 108.8 5.6 4.8 5 1 0 5 5 5 1 haemagglutination activity domain Fil_haemagg_2 PF13332.6 gi|33152406|ref|NP_873759.1| - 7.7e-22 78.2 132.7 5.3e-06 26.7 18.9 9.7 3 2 4 8 8 8 7 Hemagglutinin repeat YgbB PF02542.16 gi|33152407|ref|NP_873760.1| - 1.2e-68 230.3 0.2 1.3e-68 230.1 0.2 1.0 1 0 0 1 1 1 1 YgbB family IspD PF01128.19 gi|33152408|ref|NP_873761.1| - 2.6e-79 266.0 0.1 3e-79 265.8 0.1 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 gi|33152408|ref|NP_873761.1| - 1e-10 42.2 0.0 1.3e-10 41.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|33152408|ref|NP_873761.1| - 0.0012 18.8 0.2 0.0023 17.9 0.2 1.6 1 1 0 1 1 1 1 Cytidylyltransferase DivIC PF04977.15 gi|33152409|ref|NP_873762.1| - 7e-25 86.6 0.5 8.1e-25 86.4 0.5 1.1 1 0 0 1 1 1 1 Septum formation initiator Csm1_N PF18504.1 gi|33152409|ref|NP_873762.1| - 0.00019 21.7 3.2 0.00024 21.4 3.2 1.1 1 0 0 1 1 1 1 Csm1 N-terminal domain Flagellin_C PF00700.21 gi|33152409|ref|NP_873762.1| - 0.089 13.2 0.4 0.12 12.8 0.4 1.1 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region UPF0242 PF06785.11 gi|33152409|ref|NP_873762.1| - 0.54 10.3 3.2 0.22 11.6 0.4 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus PEPCK_ATP PF01293.20 gi|33152410|ref|NP_873763.1| - 2.2e-212 705.8 0.0 2.5e-212 705.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.6 gi|33152410|ref|NP_873763.1| - 0.022 14.9 0.4 0.45 10.7 0.1 2.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|33152410|ref|NP_873763.1| - 0.027 14.2 0.2 11 5.7 0.1 3.1 3 0 0 3 3 3 0 AAA domain DUF535 PF04393.13 gi|33152411|ref|NP_873764.1| - 1.7e-86 290.0 8.6 1.9e-86 289.8 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) 2-oxoacid_dh PF00198.23 gi|33152412|ref|NP_873765.1| - 4.7e-84 281.5 0.0 7.2e-84 280.9 0.0 1.3 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|33152412|ref|NP_873765.1| - 3.5e-16 58.8 0.4 8.6e-16 57.5 0.3 1.8 2 0 0 2 2 2 1 Biotin-requiring enzyme E3_binding PF02817.17 gi|33152412|ref|NP_873765.1| - 4e-10 39.9 0.1 9.8e-10 38.6 0.1 1.7 1 0 0 1 1 1 1 e3 binding domain EF-hand_6 PF13405.6 gi|33152412|ref|NP_873765.1| - 0.00096 18.9 0.1 0.64 10.1 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 gi|33152412|ref|NP_873765.1| - 0.016 15.6 0.0 1.2 9.7 0.0 2.5 2 0 0 2 2 2 0 EF-hand domain pair GCV_H PF01597.19 gi|33152412|ref|NP_873765.1| - 0.02 14.8 0.1 0.2 11.5 0.1 2.2 2 0 0 2 2 2 0 Glycine cleavage H-protein EF-hand_5 PF13202.6 gi|33152412|ref|NP_873765.1| - 0.022 14.2 0.4 3.6 7.2 0.1 2.6 2 0 0 2 2 2 0 EF hand EF-hand_1 PF00036.32 gi|33152412|ref|NP_873765.1| - 0.053 13.1 0.1 5.8 6.7 0.0 2.7 2 0 0 2 2 2 0 EF hand Transket_pyr PF02779.24 gi|33152413|ref|NP_873766.1| - 1.9e-65 219.9 0.0 3.2e-65 219.1 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 gi|33152413|ref|NP_873766.1| - 2.9e-54 182.9 0.1 6e-54 181.9 0.1 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal E1_dh PF00676.20 gi|33152413|ref|NP_873766.1| - 7.6e-54 182.7 0.2 1.4e-53 181.9 0.2 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component 2-oxogl_dehyd_N PF16078.5 gi|33152413|ref|NP_873766.1| - 1.4e-14 53.4 1.2 3.1e-14 52.3 1.2 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus Creatininase PF02633.14 gi|33152413|ref|NP_873766.1| - 0.1 12.1 0.1 0.26 10.7 0.1 1.7 1 1 0 1 1 1 0 Creatinine amidohydrolase ABC_tran PF00005.27 gi|33152414|ref|NP_873767.1| - 2e-27 96.4 0.1 3.4e-27 95.6 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33152414|ref|NP_873767.1| - 7.3e-10 39.1 2.9 0.00036 20.4 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|33152414|ref|NP_873767.1| - 1.7e-05 25.1 0.1 3.1e-05 24.3 0.1 1.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|33152414|ref|NP_873767.1| - 2.2e-05 24.0 0.4 0.0076 15.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|33152414|ref|NP_873767.1| - 3.3e-05 23.8 0.1 3.9e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|33152414|ref|NP_873767.1| - 9.8e-05 22.0 0.1 0.00021 20.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|33152414|ref|NP_873767.1| - 0.00019 22.0 0.3 0.00029 21.4 0.3 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|33152414|ref|NP_873767.1| - 0.00048 20.1 0.4 0.0011 18.9 0.1 1.7 2 0 0 2 2 2 1 RsgA GTPase Rad17 PF03215.15 gi|33152414|ref|NP_873767.1| - 0.00053 20.0 0.2 0.00078 19.4 0.2 1.5 1 1 0 1 1 1 1 Rad17 P-loop domain ABC_ATPase PF09818.9 gi|33152414|ref|NP_873767.1| - 0.0031 16.4 0.3 0.06 12.1 0.2 2.0 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_30 PF13604.6 gi|33152414|ref|NP_873767.1| - 0.0038 17.0 0.1 0.01 15.6 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152414|ref|NP_873767.1| - 0.007 16.8 0.5 0.024 15.0 0.5 1.8 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 gi|33152414|ref|NP_873767.1| - 0.021 13.9 0.4 0.038 13.0 0.4 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_10 PF12846.7 gi|33152414|ref|NP_873767.1| - 0.04 12.8 0.1 0.073 12.0 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain Adeno_IVa2 PF02456.15 gi|33152414|ref|NP_873767.1| - 0.041 12.7 0.2 0.065 12.0 0.2 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein ATPase_2 PF01637.18 gi|33152414|ref|NP_873767.1| - 0.044 13.7 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_27 PF13514.6 gi|33152414|ref|NP_873767.1| - 0.047 13.3 0.0 0.075 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|33152414|ref|NP_873767.1| - 0.065 13.4 0.0 0.1 12.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|33152414|ref|NP_873767.1| - 0.1 12.2 3.3 0.36 10.4 0.3 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|33152414|ref|NP_873767.1| - 0.13 12.8 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33152414|ref|NP_873767.1| - 0.77 9.7 2.8 0.51 10.2 0.2 2.0 2 1 1 3 3 3 0 NACHT domain Peptidase_M23 PF01551.22 gi|33152415|ref|NP_873768.1| - 6.1e-30 103.3 1.3 6.1e-30 103.3 1.3 2.1 2 0 0 2 2 2 1 Peptidase family M23 OapA PF04225.12 gi|33152415|ref|NP_873768.1| - 0.00032 20.7 0.0 0.0012 18.9 0.0 2.0 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain Mtf2_C PF14061.6 gi|33152415|ref|NP_873768.1| - 0.02 15.0 0.1 0.062 13.5 0.1 1.8 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Msg2_C PF12373.8 gi|33152415|ref|NP_873768.1| - 0.032 13.7 0.5 0.12 11.8 0.2 2.2 2 0 0 2 2 2 0 Major surface glycoprotein 2 C terminal PCRF PF03462.18 gi|33152415|ref|NP_873768.1| - 0.053 13.4 3.0 0.09 12.6 3.0 1.4 1 0 0 1 1 1 0 PCRF domain Thioredoxin_2 PF13098.6 gi|33152416|ref|NP_873769.1| - 7.1e-25 87.6 0.0 1e-24 87.1 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DsbC_N PF10411.9 gi|33152416|ref|NP_873769.1| - 4.8e-10 38.7 0.0 8.3e-10 38.0 0.0 1.4 1 0 0 1 1 1 1 Disulfide bond isomerase protein N-terminus DSBA PF01323.20 gi|33152416|ref|NP_873769.1| - 2.3e-06 27.5 0.2 0.013 15.3 0.0 2.9 2 1 0 3 3 3 2 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|33152416|ref|NP_873769.1| - 0.015 15.5 0.1 0.88 9.7 0.1 2.2 1 1 0 2 2 2 0 Thioredoxin GGACT PF06094.12 gi|33152416|ref|NP_873769.1| - 0.037 14.6 0.0 0.76 10.4 0.0 2.1 2 0 0 2 2 2 0 Gamma-glutamyl cyclotransferase, AIG2-like DHHA1 PF02272.19 gi|33152417|ref|NP_873770.1| - 4.7e-27 95.1 0.0 1e-26 94.0 0.0 1.6 1 0 0 1 1 1 1 DHHA1 domain RecJ_OB PF17768.1 gi|33152417|ref|NP_873770.1| - 4.2e-20 72.0 0.1 7.2e-20 71.2 0.1 1.4 1 0 0 1 1 1 1 RecJ OB domain DHH PF01368.20 gi|33152417|ref|NP_873770.1| - 5.8e-09 36.1 0.0 1.2e-08 35.1 0.0 1.5 1 0 0 1 1 1 1 DHH family Glyco_transf_4 PF13439.6 gi|33152417|ref|NP_873770.1| - 0.07 13.1 0.0 0.21 11.6 0.0 1.8 1 1 0 1 1 1 0 Glycosyltransferase Family 4 Hydrolase_3 PF08282.12 gi|33152419|ref|NP_873772.1| - 6.2e-59 199.8 0.0 6.9e-59 199.6 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|33152419|ref|NP_873772.1| - 7.9e-13 48.5 0.0 5.3e-06 26.1 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|33152419|ref|NP_873772.1| - 7.7e-10 39.4 0.3 0.00046 20.5 0.0 3.4 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.14 gi|33152419|ref|NP_873772.1| - 2.6e-05 24.0 1.2 0.0053 16.4 0.0 3.4 2 1 1 3 3 3 1 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_6 PF13344.6 gi|33152419|ref|NP_873772.1| - 7.1e-05 22.9 0.0 0.00012 22.1 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|33152419|ref|NP_873772.1| - 0.00025 21.2 0.1 0.011 15.8 0.1 2.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|33152419|ref|NP_873772.1| - 0.00055 20.4 1.3 8.6 6.7 0.0 3.4 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase DUF2608 PF11019.8 gi|33152419|ref|NP_873772.1| - 0.016 14.7 0.0 4.8 6.6 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2608) ATP-grasp_5 PF13549.6 gi|33152419|ref|NP_873772.1| - 0.025 14.0 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain Ldh_2 PF02615.14 gi|33152419|ref|NP_873772.1| - 0.025 13.7 0.0 0.081 12.1 0.0 1.8 2 0 0 2 2 2 0 Malate/L-lactate dehydrogenase MEF2_binding PF09047.10 gi|33152419|ref|NP_873772.1| - 0.11 12.4 0.3 0.2 11.5 0.3 1.4 1 0 0 1 1 1 0 MEF2 binding Ham1p_like PF01725.16 gi|33152420|ref|NP_873773.1| - 2.9e-57 193.6 0.0 3.2e-57 193.5 0.0 1.0 1 0 0 1 1 1 1 Ham1 family YbjQ_1 PF01906.17 gi|33152421|ref|NP_873774.1| - 1.9e-37 128.1 3.8 2.1e-37 127.9 3.8 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding Hexapep_2 PF14602.6 gi|33152421|ref|NP_873774.1| - 0.033 13.9 1.3 0.098 12.4 0.3 2.2 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase Trypsin_2 PF13365.6 gi|33152422|ref|NP_873775.1| - 6.3e-28 98.6 0.2 1.1e-27 97.8 0.2 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|33152422|ref|NP_873775.1| - 2.1e-16 60.4 0.0 4.4e-16 59.4 0.0 1.5 1 1 0 1 1 1 1 Trypsin PDZ_2 PF13180.6 gi|33152422|ref|NP_873775.1| - 1.3e-15 57.4 0.5 1.9e-14 53.7 0.3 2.5 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 gi|33152422|ref|NP_873775.1| - 5.9e-10 39.4 3.5 6.7e-09 36.0 0.8 2.4 2 0 0 2 2 2 1 PDZ domain PDZ_6 PF17820.1 gi|33152422|ref|NP_873775.1| - 4.9e-08 32.7 4.3 1.1e-07 31.6 0.3 2.4 2 0 0 2 2 2 1 PDZ domain Peptidase_S46 PF10459.9 gi|33152422|ref|NP_873775.1| - 0.0017 17.1 1.1 0.15 10.7 1.1 2.1 2 0 0 2 2 2 2 Peptidase S46 Abhydro_lipase PF04083.16 gi|33152422|ref|NP_873775.1| - 0.036 13.6 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region Cytidylate_kin PF02224.18 gi|33152423|ref|NP_873776.1| - 2.1e-73 246.6 0.1 2.4e-73 246.4 0.1 1.0 1 0 0 1 1 1 1 Cytidylate kinase AAA_17 PF13207.6 gi|33152423|ref|NP_873776.1| - 4.2e-06 27.2 0.2 0.00024 21.5 0.2 2.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|33152423|ref|NP_873776.1| - 1.3e-05 25.5 0.2 2.8e-05 24.3 0.2 1.6 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|33152423|ref|NP_873776.1| - 3.5e-05 24.4 0.0 0.0001 22.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|33152423|ref|NP_873776.1| - 0.00066 19.9 0.1 0.0017 18.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|33152423|ref|NP_873776.1| - 0.015 15.4 0.0 0.025 14.7 0.0 1.4 1 0 0 1 1 1 0 Adenylate kinase AAA PF00004.29 gi|33152423|ref|NP_873776.1| - 0.056 13.9 0.0 0.1 13.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ArsA_ATPase PF02374.15 gi|33152423|ref|NP_873776.1| - 0.11 11.6 0.2 0.23 10.6 0.2 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase dNK PF01712.19 gi|33152423|ref|NP_873776.1| - 0.14 12.0 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase S1 PF00575.23 gi|33152424|ref|NP_873777.1| - 6.5e-94 308.4 41.6 7.6e-22 77.5 0.7 6.1 6 0 0 6 6 6 6 S1 RNA binding domain PCB_OB PF17092.5 gi|33152424|ref|NP_873777.1| - 8.1e-08 33.0 15.6 0.014 16.2 0.1 6.3 1 1 5 6 6 6 2 Penicillin-binding protein OB-like domain S1_2 PF13509.6 gi|33152424|ref|NP_873777.1| - 4.1e-07 30.0 11.1 0.47 10.5 0.1 7.2 6 2 0 6 6 6 2 S1 domain RNA_pol_Rbc25 PF08292.12 gi|33152424|ref|NP_873777.1| - 0.00086 19.5 2.8 14 5.9 0.0 5.0 5 0 0 5 5 5 2 RNA polymerase III subunit Rpc25 RuvA_N PF01330.21 gi|33152424|ref|NP_873777.1| - 0.91 9.7 9.5 3.2 7.9 0.1 4.4 4 0 0 4 4 4 0 RuvA N terminal domain CsrA PF02599.16 gi|33152424|ref|NP_873777.1| - 3.9 7.5 14.3 13 5.8 0.1 5.4 6 0 0 6 6 6 0 Global regulator protein family Bac_DNA_binding PF00216.21 gi|33152425|ref|NP_873778.1| - 3.9e-26 91.1 0.0 4.2e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 gi|33152425|ref|NP_873778.1| - 0.0015 18.6 0.0 0.0016 18.6 0.0 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_euk_1 PF14908.6 gi|33152425|ref|NP_873778.1| - 0.009 16.1 0.0 0.0098 16.0 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 HU-CCDC81_bac_2 PF18175.1 gi|33152425|ref|NP_873778.1| - 0.021 14.7 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 LapA_dom PF06305.11 gi|33152426|ref|NP_873779.1| - 1.5e-16 60.0 2.6 1.5e-16 60.0 2.6 2.0 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain Cyt_bd_oxida_II PF02322.15 gi|33152426|ref|NP_873779.1| - 0.0029 17.0 1.2 0.0039 16.6 1.2 1.2 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Yip1 PF04893.17 gi|33152426|ref|NP_873779.1| - 0.14 11.9 5.6 0.17 11.6 5.6 1.1 1 0 0 1 1 1 0 Yip1 domain TPR_14 PF13428.6 gi|33152427|ref|NP_873780.1| - 2.8e-11 43.2 1.5 0.01 16.6 0.0 5.3 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|33152427|ref|NP_873780.1| - 1.3e-10 40.5 1.7 0.19 11.8 0.0 5.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|33152427|ref|NP_873780.1| - 3.1e-10 39.4 6.9 0.00089 19.2 0.0 5.7 6 0 0 6 6 6 2 Tetratricopeptide repeat Rubredoxin_2 PF18073.1 gi|33152427|ref|NP_873780.1| - 1.1e-09 37.9 7.7 1.6e-09 37.3 7.7 1.3 1 0 0 1 1 1 1 Rubredoxin metal binding domain TPR_16 PF13432.6 gi|33152427|ref|NP_873780.1| - 2.4e-09 37.7 0.4 0.0015 19.2 0.0 4.1 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33152427|ref|NP_873780.1| - 1.2e-07 32.1 6.1 0.00015 22.2 0.2 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33152427|ref|NP_873780.1| - 3.4e-07 29.8 4.2 0.0069 16.2 0.0 4.7 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33152427|ref|NP_873780.1| - 5e-06 26.7 5.7 0.028 14.7 0.2 4.9 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33152427|ref|NP_873780.1| - 7.2e-06 26.3 0.5 0.79 10.5 0.0 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|33152427|ref|NP_873780.1| - 4.3e-05 23.1 0.8 0.5 10.1 0.0 4.2 4 0 0 4 4 4 1 TPR repeat TPR_10 PF13374.6 gi|33152427|ref|NP_873780.1| - 0.00023 20.9 1.5 3.2 7.8 0.0 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33152427|ref|NP_873780.1| - 0.00036 20.5 0.2 2.1 8.8 0.0 3.7 3 0 0 3 3 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|33152427|ref|NP_873780.1| - 0.00064 19.9 5.7 0.23 11.7 0.4 3.9 2 2 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|33152427|ref|NP_873780.1| - 0.008 16.3 0.1 5.9 7.1 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_20 PF14561.6 gi|33152427|ref|NP_873780.1| - 0.019 15.3 6.7 2.7 8.4 0.0 4.2 4 1 1 5 5 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|33152427|ref|NP_873780.1| - 0.035 14.7 0.3 0.49 11.2 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat RPN6_N PF18055.1 gi|33152427|ref|NP_873780.1| - 0.079 13.3 3.1 0.3 11.5 0.3 2.9 2 2 1 3 3 3 0 26S proteasome regulatory subunit RPN6 N-terminal domain DZR PF12773.7 gi|33152427|ref|NP_873780.1| - 0.11 12.6 0.1 0.23 11.5 0.1 1.6 1 0 0 1 1 1 0 Double zinc ribbon Rapsyn_N PF10579.9 gi|33152427|ref|NP_873780.1| - 0.11 12.6 1.7 2.4 8.3 0.0 3.3 3 1 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region zinc-ribbons_6 PF07191.12 gi|33152427|ref|NP_873780.1| - 0.18 11.8 1.9 0.3 11.1 0.3 2.0 2 0 0 2 2 2 0 zinc-ribbons zinc_ribbon_10 PF10058.9 gi|33152427|ref|NP_873780.1| - 0.27 11.0 6.1 2.2 8.1 0.4 2.6 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn-ribbon_8 PF09723.10 gi|33152427|ref|NP_873780.1| - 3.3 7.9 4.7 9.1 6.5 4.7 1.8 1 1 0 1 1 1 0 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|33152427|ref|NP_873780.1| - 5.9 6.9 13.4 99 3.0 11.1 3.0 2 1 0 2 2 2 0 SprT-like zinc ribbon domain OMPdecase PF00215.24 gi|33152428|ref|NP_873781.1| - 1.2e-48 165.6 0.0 1.4e-48 165.5 0.0 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family SUI1 PF01253.22 gi|33152429|ref|NP_873782.1| - 8.7e-16 58.2 0.6 1.2e-15 57.8 0.6 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|33152429|ref|NP_873782.1| - 0.045 14.1 0.1 0.049 13.9 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) SPATIAL PF15256.6 gi|33152429|ref|NP_873782.1| - 0.088 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 SPATIAL Flavoprotein PF02441.19 gi|33152431|ref|NP_873784.1| - 1.1e-22 80.5 0.1 1.3e-22 80.2 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein SirB PF04247.12 gi|33152432|ref|NP_873785.1| - 1.4e-26 92.9 13.9 1.6e-26 92.8 13.9 1.0 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF615 PF04751.14 gi|33152433|ref|NP_873786.1| - 8.4e-52 175.2 11.3 9.5e-52 175.1 11.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF615) DUF3867 PF12983.7 gi|33152433|ref|NP_873786.1| - 0.022 14.8 0.6 0.033 14.3 0.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3867) DUF5631 PF18645.1 gi|33152433|ref|NP_873786.1| - 0.044 14.2 0.1 0.088 13.2 0.1 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5631) AvrM_N PF18247.1 gi|33152433|ref|NP_873786.1| - 0.074 13.0 0.6 7.4 6.6 0.0 2.4 2 0 0 2 2 2 0 Flax-rust effector AvrM N-terminal domain DUF433 PF04255.14 gi|33152433|ref|NP_873786.1| - 0.18 11.7 0.0 0.42 10.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF433) BBS1 PF14779.6 gi|33152433|ref|NP_873786.1| - 0.38 10.2 3.1 3.7 6.9 0.7 2.0 1 1 1 2 2 2 0 Ciliary BBSome complex subunit 1 PmbA_TldD PF01523.16 gi|33152434|ref|NP_873787.1| - 5.2e-55 187.2 0.1 7.5e-55 186.7 0.1 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Pro_CA PF00484.19 gi|33152436|ref|NP_873789.1| - 2.1e-50 171.0 0.1 2.9e-50 170.6 0.1 1.2 1 0 0 1 1 1 1 Carbonic anhydrase Baculo_E25 PF05274.11 gi|33152436|ref|NP_873789.1| - 0.023 14.5 0.5 0.042 13.7 0.1 1.6 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein E25 CSD PF00313.22 gi|33152437|ref|NP_873790.1| - 1.8e-25 88.6 1.1 1.9e-25 88.5 1.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|33152437|ref|NP_873790.1| - 0.0079 15.8 0.1 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain CusF_Ec PF11604.8 gi|33152437|ref|NP_873790.1| - 0.049 13.6 0.0 0.065 13.2 0.0 1.2 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF DUF1439 PF07273.12 gi|33152438|ref|NP_873791.1| - 2e-50 170.6 1.6 2.4e-50 170.3 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1439) Lipoprotein_Ltp PF07553.11 gi|33152438|ref|NP_873791.1| - 0.1 12.9 0.2 0.3 11.4 0.2 1.8 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein TGT PF01702.18 gi|33152439|ref|NP_873792.1| - 8.1e-152 505.4 0.0 9.9e-152 505.1 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Arm-DNA-bind_2 PF12167.8 gi|33152439|ref|NP_873792.1| - 0.046 13.6 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 Arm DNA-binding domain SH3_3 PF08239.11 gi|33152440|ref|NP_873793.1| - 8.4e-10 38.8 0.1 1.6e-09 37.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain DUF3573 PF12097.8 gi|33152440|ref|NP_873793.1| - 0.0017 17.2 0.9 0.0019 17.1 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) DUF812 PF05667.11 gi|33152440|ref|NP_873793.1| - 0.0018 17.2 7.5 0.0021 17.0 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF3450 PF11932.8 gi|33152440|ref|NP_873793.1| - 0.002 17.5 11.1 0.0033 16.8 11.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) MCU PF04678.13 gi|33152440|ref|NP_873793.1| - 0.0032 17.6 0.6 0.0055 16.8 0.6 1.3 1 0 0 1 1 1 1 Mitochondrial calcium uniporter SH3_4 PF06347.13 gi|33152440|ref|NP_873793.1| - 0.0034 17.2 0.0 0.006 16.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain Phlebovirus_NSM PF07246.11 gi|33152440|ref|NP_873793.1| - 0.0039 16.6 0.5 0.0044 16.4 0.5 1.2 1 0 0 1 1 1 1 Phlebovirus nonstructural protein NS-M GldM_N PF12081.8 gi|33152440|ref|NP_873793.1| - 0.0077 16.3 2.5 0.011 15.8 2.5 1.3 1 0 0 1 1 1 1 GldM N-terminal domain CSN5_C PF18323.1 gi|33152440|ref|NP_873793.1| - 0.0086 17.0 5.7 0.016 16.1 5.7 1.5 1 0 0 1 1 1 1 Cop9 signalosome subunit 5 C-terminal domain DUF2368 PF10166.9 gi|33152440|ref|NP_873793.1| - 0.0094 15.6 0.3 0.018 14.7 0.2 1.4 1 1 0 1 1 1 1 Uncharacterised conserved protein (DUF2368) Exonuc_VII_L PF02601.15 gi|33152440|ref|NP_873793.1| - 0.0097 15.5 4.4 0.012 15.3 4.4 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit FliJ PF02050.16 gi|33152440|ref|NP_873793.1| - 0.014 15.6 11.9 0.021 15.0 11.9 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein FapA PF03961.13 gi|33152440|ref|NP_873793.1| - 0.019 13.6 6.2 0.029 13.0 6.2 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A Fmp27_WPPW PF10359.9 gi|33152440|ref|NP_873793.1| - 0.025 13.5 5.3 0.031 13.2 5.3 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF5634 PF18681.1 gi|33152440|ref|NP_873793.1| - 0.026 14.9 0.4 0.12 12.8 0.0 2.1 1 1 2 3 3 3 0 Family of unknown function (DUF5634) IFT57 PF10498.9 gi|33152440|ref|NP_873793.1| - 0.027 13.5 7.9 0.034 13.1 7.9 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 ATP-grasp_6 PF18419.1 gi|33152440|ref|NP_873793.1| - 0.036 13.7 0.2 0.1 12.3 0.0 1.8 2 0 0 2 2 1 0 ATP-grasp-like domain COG6 PF06419.11 gi|33152440|ref|NP_873793.1| - 0.042 12.1 7.5 0.052 11.8 7.5 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 stn_TNFRSF12A PF12191.8 gi|33152440|ref|NP_873793.1| - 0.071 13.3 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain TPR_MLP1_2 PF07926.12 gi|33152440|ref|NP_873793.1| - 0.087 12.9 14.1 0.12 12.4 14.1 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 gi|33152440|ref|NP_873793.1| - 0.36 10.8 9.0 0.53 10.3 9.0 1.2 1 0 0 1 1 1 0 Laminin Domain II UPF0242 PF06785.11 gi|33152440|ref|NP_873793.1| - 0.42 10.7 10.9 0.63 10.1 10.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CLZ PF16526.5 gi|33152440|ref|NP_873793.1| - 0.7 10.3 10.4 0.075 13.4 2.3 2.2 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TMF_TATA_bd PF12325.8 gi|33152440|ref|NP_873793.1| - 0.72 10.1 12.5 0.98 9.7 0.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Allexi_40kDa PF05549.11 gi|33152440|ref|NP_873793.1| - 0.78 9.2 4.2 1.1 8.7 4.2 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein GrpE PF01025.19 gi|33152440|ref|NP_873793.1| - 0.79 9.4 11.1 2 8.0 11.1 1.5 1 1 0 1 1 1 0 GrpE LPP PF04728.13 gi|33152440|ref|NP_873793.1| - 0.8 10.1 8.6 0.27 11.7 3.4 2.3 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DUF1664 PF07889.12 gi|33152440|ref|NP_873793.1| - 0.83 9.7 5.6 1.2 9.1 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Atg14 PF10186.9 gi|33152440|ref|NP_873793.1| - 0.85 8.6 10.9 1.2 8.2 10.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Activator_LAG-3 PF11498.8 gi|33152440|ref|NP_873793.1| - 0.93 8.4 9.3 1.1 8.1 9.3 1.1 1 0 0 1 1 1 0 Transcriptional activator LAG-3 USP8_interact PF08941.10 gi|33152440|ref|NP_873793.1| - 0.98 9.2 8.8 2 8.2 8.7 1.5 1 1 0 1 1 1 0 USP8 interacting YlqD PF11068.8 gi|33152440|ref|NP_873793.1| - 1.7 9.0 13.5 2.8 8.3 13.5 1.2 1 0 0 1 1 1 0 YlqD protein Cnn_1N PF07989.11 gi|33152440|ref|NP_873793.1| - 1.8 8.8 13.5 14 5.9 13.5 2.1 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Fzo_mitofusin PF04799.13 gi|33152440|ref|NP_873793.1| - 2.1 7.9 6.5 3.7 7.1 6.5 1.4 1 0 0 1 1 1 0 fzo-like conserved region V_ATPase_I PF01496.19 gi|33152440|ref|NP_873793.1| - 2.5 5.9 5.4 3.1 5.6 5.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3552 PF12072.8 gi|33152440|ref|NP_873793.1| - 2.7 7.4 17.9 3.1 7.2 17.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF2968 PF11180.8 gi|33152440|ref|NP_873793.1| - 3.4 7.3 14.0 5.1 6.7 14.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) BST2 PF16716.5 gi|33152440|ref|NP_873793.1| - 3.6 8.2 13.3 1.8 9.2 0.9 2.3 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF4407 PF14362.6 gi|33152440|ref|NP_873793.1| - 4 6.7 10.8 1.9 7.8 8.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) OmpH PF03938.14 gi|33152440|ref|NP_873793.1| - 4.3 7.7 14.9 6.5 7.1 14.9 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Csm1_N PF18504.1 gi|33152440|ref|NP_873793.1| - 4.3 7.8 13.1 14 6.1 6.3 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain RRP36 PF06102.12 gi|33152440|ref|NP_873793.1| - 4.5 7.2 12.2 0.58 10.1 2.7 2.0 1 1 1 2 2 2 0 rRNA biogenesis protein RRP36 UPF0449 PF15136.6 gi|33152440|ref|NP_873793.1| - 4.9 7.7 10.9 16 6.0 10.7 1.8 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 DUF5320 PF17253.2 gi|33152440|ref|NP_873793.1| - 5.6 8.1 6.2 6.5 7.9 0.1 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5320) YabA PF06156.13 gi|33152440|ref|NP_873793.1| - 6.9 7.4 9.5 24 5.6 9.5 1.8 1 1 0 1 1 1 0 Initiation control protein YabA PHO4 PF01384.20 gi|33152441|ref|NP_873794.1| - 1.5e-103 346.4 44.6 1.9e-103 346.0 44.6 1.1 1 0 0 1 1 1 1 Phosphate transporter family DUF2371 PF10177.9 gi|33152441|ref|NP_873794.1| - 4.8 7.4 7.6 5.6 7.1 0.4 3.4 2 2 1 3 3 3 0 Uncharacterised conserved protein (DUF2371) PhoU_div PF01865.16 gi|33152442|ref|NP_873795.1| - 1.6e-63 213.9 1.5 1.8e-63 213.8 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|33152442|ref|NP_873795.1| - 0.0065 16.9 2.3 0.58 10.7 0.1 2.5 2 1 0 2 2 2 2 PhoU domain CdiI_2 PF18593.1 gi|33152442|ref|NP_873795.1| - 0.011 16.4 0.2 2.6 8.7 0.0 2.9 2 1 1 3 3 3 0 CdiI immunity protein FliJ PF02050.16 gi|33152442|ref|NP_873795.1| - 0.052 13.8 0.1 0.18 12.0 0.0 1.9 2 0 0 2 2 2 0 Flagellar FliJ protein DnaB_C PF03796.15 gi|33152443|ref|NP_873796.1| - 5.3e-108 360.2 0.4 9.8e-108 359.3 0.4 1.4 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 gi|33152443|ref|NP_873796.1| - 4.7e-37 126.2 0.2 5.5e-36 122.8 0.1 2.3 2 0 0 2 2 2 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 gi|33152443|ref|NP_873796.1| - 5e-10 39.3 0.0 9.1e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|33152443|ref|NP_873796.1| - 0.016 15.4 0.3 0.37 10.9 0.1 2.9 2 1 0 2 2 2 0 AAA domain YcgL PF05166.13 gi|33152444|ref|NP_873797.1| - 1.1e-29 102.6 0.2 1.5e-29 102.2 0.2 1.1 1 0 0 1 1 1 1 YcgL domain ATP-cone PF03477.16 gi|33152445|ref|NP_873798.1| - 2.8e-13 50.2 0.0 4.1e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 ATP cone domain Lar_restr_allev PF14354.6 gi|33152445|ref|NP_873798.1| - 0.14 12.5 0.1 0.2 12.1 0.1 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar AA_kinase PF00696.28 gi|33152446|ref|NP_873799.1| - 9.1e-51 172.8 2.1 4.7e-50 170.4 0.9 2.0 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|33152446|ref|NP_873799.1| - 0.0072 16.1 3.1 0.53 10.1 0.0 3.2 2 1 1 3 3 3 2 ACT domain ACT PF01842.25 gi|33152446|ref|NP_873799.1| - 0.02 14.7 0.3 0.062 13.1 0.3 1.8 1 0 0 1 1 1 0 ACT domain SecD-TM1 PF13721.6 gi|33152446|ref|NP_873799.1| - 0.085 13.3 1.8 0.28 11.7 0.3 2.4 2 0 0 2 2 2 0 SecD export protein N-terminal TM region DUF496 PF04363.12 gi|33152448|ref|NP_873801.1| - 2e-43 146.3 11.7 2.3e-43 146.1 11.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF496) UPF0184 PF03670.13 gi|33152448|ref|NP_873801.1| - 0.049 14.0 1.3 0.055 13.9 0.2 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) CobU PF02283.16 gi|33152448|ref|NP_873801.1| - 0.092 12.3 0.4 0.14 11.7 0.4 1.4 1 1 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DUF724 PF05266.14 gi|33152448|ref|NP_873801.1| - 0.34 10.7 3.6 0.97 9.2 3.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF724) RecG_N PF17190.4 gi|33152448|ref|NP_873801.1| - 0.93 10.3 6.1 1.9 9.3 2.3 2.3 1 1 1 2 2 2 0 RecG N-terminal helical domain Ppx-GppA PF02541.16 gi|33152449|ref|NP_873802.1| - 1.3e-93 313.6 0.1 1.7e-93 313.2 0.1 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family FtsA PF14450.6 gi|33152449|ref|NP_873802.1| - 0.00035 21.0 0.0 0.045 14.2 0.0 3.1 3 0 0 3 3 3 1 Cell division protein FtsA MA3 PF02847.17 gi|33152449|ref|NP_873802.1| - 0.1 12.6 0.1 0.64 10.0 0.0 2.2 1 1 1 2 2 2 0 MA3 domain MreB_Mbl PF06723.13 gi|33152449|ref|NP_873802.1| - 0.12 11.2 0.0 0.23 10.2 0.0 1.4 1 0 0 1 1 1 0 MreB/Mbl protein DUF386 PF04074.12 gi|33152450|ref|NP_873803.1| - 1.9e-37 128.5 0.0 2.1e-37 128.3 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL HTH_6 PF01418.17 gi|33152451|ref|NP_873804.1| - 1.5e-23 82.6 1.0 7.2e-23 80.4 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 gi|33152451|ref|NP_873804.1| - 1e-19 70.7 1.9 2e-19 69.7 0.2 2.3 3 0 0 3 3 3 1 SIS domain SIS_2 PF13580.6 gi|33152451|ref|NP_873804.1| - 5.4e-08 32.9 1.0 0.00011 22.2 0.2 2.4 1 1 1 2 2 2 2 SIS domain DUF592 PF04574.13 gi|33152451|ref|NP_873804.1| - 1.7e-05 24.6 0.1 3.5e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF592) RWP-RK PF02042.15 gi|33152451|ref|NP_873804.1| - 0.032 14.2 0.0 0.11 12.6 0.0 1.9 1 0 0 1 1 1 0 RWP-RK domain HTH_IclR PF09339.10 gi|33152451|ref|NP_873804.1| - 0.064 13.1 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Aminotran_5 PF00266.19 gi|33152453|ref|NP_873806.1| - 2e-66 224.5 0.2 2.3e-66 224.3 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class-V EPSP_synthase PF00275.20 gi|33152454|ref|NP_873807.1| - 2.1e-152 507.6 0.1 2.5e-152 507.4 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DUF434 PF04256.12 gi|33152454|ref|NP_873807.1| - 0.029 14.0 0.0 7.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF434) AA_kinase PF00696.28 gi|33152455|ref|NP_873808.1| - 6.2e-25 88.2 0.4 8.1e-25 87.8 0.4 1.2 1 0 0 1 1 1 1 Amino acid kinase family Acetyltransf_1 PF00583.25 gi|33152455|ref|NP_873808.1| - 6.2e-06 26.4 0.0 1.5e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|33152455|ref|NP_873808.1| - 8.1e-06 26.2 0.0 8.1e-05 23.0 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|33152455|ref|NP_873808.1| - 0.00089 19.2 0.3 0.013 15.5 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Topoisom_bac PF01131.20 gi|33152456|ref|NP_873809.1| - 1.4e-126 422.9 1.0 2e-126 422.4 1.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|33152456|ref|NP_873809.1| - 2.2e-34 117.8 0.2 5.7e-34 116.4 0.2 1.8 1 0 0 1 1 1 1 Toprim domain Topo_Zn_Ribbon PF08272.11 gi|33152456|ref|NP_873809.1| - 4.4e-34 115.9 0.5 2.4e-19 68.7 0.5 3.2 3 0 0 3 3 3 2 Topoisomerase I zinc-ribbon-like zf-C4_Topoisom PF01396.19 gi|33152456|ref|NP_873809.1| - 1.9e-19 69.2 13.8 3.4e-09 36.3 0.8 5.3 5 0 0 5 5 5 3 Topoisomerase DNA binding C4 zinc finger Toprim_4 PF13662.6 gi|33152456|ref|NP_873809.1| - 0.016 15.6 0.0 0.17 12.4 0.0 2.5 2 0 0 2 2 2 0 Toprim domain YhfH PF14149.6 gi|33152456|ref|NP_873809.1| - 0.043 13.8 1.3 1.8 8.6 0.0 2.9 2 0 0 2 2 2 0 YhfH-like protein Zn_Tnp_IS1595 PF12760.7 gi|33152456|ref|NP_873809.1| - 0.37 10.8 7.2 1.3 9.0 0.3 3.7 3 0 0 3 3 3 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|33152456|ref|NP_873809.1| - 0.52 10.5 5.9 17 5.6 0.0 4.1 3 1 2 5 5 5 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|33152456|ref|NP_873809.1| - 0.8 9.3 4.4 0.39 10.3 0.3 2.6 3 0 0 3 3 3 0 TFIIB zinc-binding Ogr_Delta PF04606.12 gi|33152456|ref|NP_873809.1| - 1.6 8.8 9.6 14 5.7 0.3 3.6 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger HypA PF01155.19 gi|33152456|ref|NP_873809.1| - 1.6 8.8 7.9 5.1 7.1 0.4 3.2 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_recom PF13408.6 gi|33152456|ref|NP_873809.1| - 2 9.0 7.8 60 4.3 0.2 3.7 3 0 0 3 3 3 0 Recombinase zinc beta ribbon domain zf-ribbon_3 PF13248.6 gi|33152456|ref|NP_873809.1| - 5.4 6.6 6.6 6 6.4 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbon domain Helicase_RecD PF05127.14 gi|33152457|ref|NP_873810.1| - 8.1e-40 136.5 1.0 1.1e-37 129.6 1.0 2.4 1 1 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|33152457|ref|NP_873810.1| - 4.3e-29 101.5 0.1 6.1e-16 58.5 0.0 2.3 1 1 1 2 2 2 2 GNAT acetyltransferase 2 tRNA_bind_3 PF17176.4 gi|33152457|ref|NP_873810.1| - 5.9e-16 58.8 0.9 1.8e-15 57.2 0.9 1.9 1 0 0 1 1 1 1 tRNA-binding domain AAA_30 PF13604.6 gi|33152457|ref|NP_873810.1| - 1.8e-07 31.1 0.0 5.3e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain Acetyltransf_7 PF13508.7 gi|33152457|ref|NP_873810.1| - 1.5e-06 28.5 0.0 4.6e-06 27.0 0.0 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|33152457|ref|NP_873810.1| - 4.7e-06 26.6 0.0 4.3e-05 23.5 0.0 2.6 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|33152457|ref|NP_873810.1| - 2.9e-05 24.3 0.0 0.00014 22.1 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family AAA_14 PF13173.6 gi|33152457|ref|NP_873810.1| - 0.0006 19.8 0.1 0.0028 17.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain Acetyltransf_CG PF14542.6 gi|33152457|ref|NP_873810.1| - 0.0013 18.9 0.1 0.012 15.7 0.0 2.4 3 0 0 3 3 2 1 GCN5-related N-acetyl-transferase DUF1726 PF08351.11 gi|33152457|ref|NP_873810.1| - 0.005 16.7 0.0 0.032 14.1 0.0 2.6 3 0 0 3 3 2 1 Domain of unknown function (DUF1726) AAA_22 PF13401.6 gi|33152457|ref|NP_873810.1| - 0.0084 16.4 0.3 0.038 14.3 0.1 2.3 1 1 0 1 1 1 1 AAA domain FR47 PF08445.10 gi|33152457|ref|NP_873810.1| - 0.033 14.2 0.1 0.31 11.1 0.0 2.5 3 0 0 3 3 2 0 FR47-like protein AAA_16 PF13191.6 gi|33152457|ref|NP_873810.1| - 0.037 14.4 0.2 0.13 12.6 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain Acetyltransf_9 PF13527.7 gi|33152457|ref|NP_873810.1| - 0.06 13.4 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_5 PF07728.14 gi|33152457|ref|NP_873810.1| - 0.072 13.1 0.0 1 9.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) CTP-dep_RFKase PF01982.16 gi|33152457|ref|NP_873810.1| - 0.1 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function DUF120 UPF0054 PF02130.17 gi|33152458|ref|NP_873811.1| - 2.4e-38 130.8 0.1 2.8e-38 130.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 MoaE PF02391.17 gi|33152459|ref|NP_873812.1| - 6.5e-36 123.0 0.0 7.8e-36 122.8 0.0 1.1 1 0 0 1 1 1 1 MoaE protein ThiS PF02597.20 gi|33152460|ref|NP_873813.1| - 4.1e-21 75.4 0.1 4.6e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 ThiS family MoaC PF01967.21 gi|33152461|ref|NP_873814.1| - 5.9e-57 191.6 2.1 6.7e-57 191.4 2.1 1.0 1 0 0 1 1 1 1 MoaC family Mob_synth_C PF06463.13 gi|33152462|ref|NP_873815.1| - 1.6e-38 131.5 0.0 2.7e-38 130.8 0.0 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 gi|33152462|ref|NP_873815.1| - 1.9e-27 96.7 0.0 2.9e-27 96.1 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|33152462|ref|NP_873815.1| - 8.5e-09 35.8 0.0 1.8e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|33152462|ref|NP_873815.1| - 1.9e-06 28.0 0.1 6.5e-06 26.3 0.0 1.9 2 1 0 2 2 2 1 4Fe-4S single cluster domain Cytochrom_NNT PF03264.14 gi|33152463|ref|NP_873816.1| - 1.5e-65 220.1 18.9 2.9e-64 215.9 16.2 2.1 2 0 0 2 2 2 1 NapC/NirT cytochrome c family, N-terminal region Cytochrome_C7 PF14522.6 gi|33152463|ref|NP_873816.1| - 6.8e-10 38.8 16.9 1.7e-05 24.7 4.1 3.5 3 0 0 3 3 3 3 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 gi|33152463|ref|NP_873816.1| - 4.4e-06 26.3 19.5 0.028 14.2 3.0 4.8 4 1 1 5 5 5 4 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_c3_2 PF14537.6 gi|33152463|ref|NP_873816.1| - 0.0002 21.8 23.9 1 9.9 3.4 3.4 2 1 1 3 3 3 2 Cytochrome c3 Cytochrom_CIII PF02085.16 gi|33152463|ref|NP_873816.1| - 0.011 16.0 25.2 0.57 10.6 9.6 3.6 2 1 0 3 3 3 0 Class III cytochrome C family DHC PF09626.10 gi|33152463|ref|NP_873816.1| - 0.014 16.2 28.4 0.027 15.3 0.1 5.2 2 1 2 4 4 4 0 Dihaem cytochrome c zf-C4pol PF14260.6 gi|33152463|ref|NP_873816.1| - 0.078 13.5 8.4 0.11 13.0 1.2 3.1 3 1 0 3 3 3 0 C4-type zinc-finger of DNA polymerase delta DUF1924 PF09086.11 gi|33152463|ref|NP_873816.1| - 0.83 10.1 18.1 0.42 11.0 1.9 4.3 3 1 1 4 4 4 0 Domain of unknown function (DUF1924) PSCyt3 PF07627.11 gi|33152463|ref|NP_873816.1| - 0.94 9.8 20.6 25 5.2 0.0 5.0 4 1 1 5 5 5 0 Protein of unknown function (DUF1588) Cytochrome_CBB3 PF13442.6 gi|33152463|ref|NP_873816.1| - 1.4 9.3 26.0 6.4 7.2 0.6 5.5 2 2 2 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III Zn-ribbon_8 PF09723.10 gi|33152463|ref|NP_873816.1| - 1.9 8.7 10.9 2.9 8.1 0.1 4.4 5 0 0 5 5 5 0 Zinc ribbon domain DnaJ_CXXCXGXG PF00684.19 gi|33152463|ref|NP_873816.1| - 2.6 8.5 10.5 0.63 10.5 1.0 3.1 3 0 0 3 3 3 0 DnaJ central domain CCP_MauG PF03150.14 gi|33152463|ref|NP_873816.1| - 3.1 8.4 23.9 21 5.7 0.1 5.1 2 1 1 3 3 3 0 Di-haem cytochrome c peroxidase zf-CHY PF05495.12 gi|33152463|ref|NP_873816.1| - 4 8.0 18.5 0.41 11.2 3.2 3.4 3 1 0 3 3 3 0 CHY zinc finger Cytochrom_C_2 PF01322.20 gi|33152463|ref|NP_873816.1| - 9.1 7.2 21.9 0.14 13.1 7.1 4.0 5 0 0 5 5 5 0 Cytochrome C' Molybdopterin PF00384.22 gi|33152464|ref|NP_873817.1| - 4.7e-110 368.5 0.0 5.9e-110 368.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|33152464|ref|NP_873817.1| - 9.6e-29 99.7 0.2 4.7e-28 97.4 0.0 2.2 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Molybdopterin_N PF18364.1 gi|33152464|ref|NP_873817.1| - 1.1e-12 47.7 0.2 5.5e-12 45.5 0.4 2.2 2 0 0 2 2 2 1 Molybdopterin oxidoreductase N-terminal domain RlmM_FDX PF18125.1 gi|229220789|ref|NP_873819.2| - 9.4e-29 99.7 1.1 2.3e-28 98.5 1.1 1.7 1 0 0 1 1 1 1 RlmM ferredoxin-like domain FtsJ PF01728.19 gi|229220789|ref|NP_873819.2| - 7.5e-08 32.7 0.0 1.4e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Spt5-NGN PF03439.13 gi|229220789|ref|NP_873819.2| - 0.0085 16.0 0.0 0.05 13.5 0.0 2.1 1 1 1 2 2 2 1 Early transcription elongation factor of RNA pol II, NGN section DapB_C PF05173.14 gi|33152467|ref|NP_873820.1| - 2.2e-43 147.1 0.1 3.1e-43 146.6 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|33152467|ref|NP_873820.1| - 2.1e-42 144.2 0.3 4.6e-42 143.0 0.1 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|33152467|ref|NP_873820.1| - 0.00055 20.4 0.2 0.0055 17.1 0.1 2.4 1 1 1 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain QslA_E PF18226.1 gi|33152467|ref|NP_873820.1| - 0.16 11.9 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 LasR-specific antiactivator QslA chain E Pribosyltran PF00156.27 gi|33152468|ref|NP_873821.1| - 2.9e-26 91.9 0.1 3.2e-26 91.7 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|33152468|ref|NP_873821.1| - 0.00068 19.1 0.0 0.00087 18.8 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase MerR-DNA-bind PF09278.11 gi|33152468|ref|NP_873821.1| - 0.053 14.1 0.2 1.6 9.3 0.0 2.3 2 0 0 2 2 2 0 MerR, DNA binding SLT PF01464.20 gi|33152469|ref|NP_873822.1| - 5.8e-29 100.1 0.2 2.3e-28 98.2 0.2 2.0 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT_L PF14718.6 gi|33152469|ref|NP_873822.1| - 1.7e-24 85.7 8.1 1.7e-24 85.7 8.1 4.0 4 0 0 4 4 4 2 Soluble lytic murein transglycosylase L domain tRNA-synt_1c PF00749.21 gi|33152470|ref|NP_873823.1| - 2e-123 411.3 0.0 2.4e-123 411.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|33152470|ref|NP_873823.1| - 3.8e-59 199.4 0.1 6.2e-59 198.8 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Elong-fact-P_C PF09285.11 gi|33152472|ref|NP_873825.1| - 3.4e-26 90.7 0.6 1.3e-25 88.9 0.3 2.1 2 0 0 2 2 2 1 Elongation factor P, C-terminal EFP_N PF08207.12 gi|33152472|ref|NP_873825.1| - 1.4e-23 82.6 0.1 3.4e-23 81.5 0.1 1.7 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|33152472|ref|NP_873825.1| - 5.6e-22 77.5 0.5 3e-20 72.0 0.4 2.2 2 0 0 2 2 2 1 Elongation factor P (EF-P) OB domain SARAF PF06682.12 gi|33152474|ref|NP_873827.1| - 0.011 15.4 2.0 0.014 15.1 2.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Radical_SAM PF04055.21 gi|33152475|ref|NP_873828.1| - 2e-07 31.6 0.0 4.3e-07 30.5 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|33152475|ref|NP_873828.1| - 3.8e-05 23.8 0.0 9.3e-05 22.6 0.0 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|33152475|ref|NP_873828.1| - 0.00015 22.0 0.0 0.00035 20.9 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF1039 PF06287.11 gi|33152475|ref|NP_873828.1| - 0.15 12.5 1.4 2.1 8.9 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1039) tRNA-synt_2 PF00152.20 gi|33152476|ref|NP_873829.1| - 1.7e-80 270.5 0.0 2e-80 270.2 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|33152476|ref|NP_873829.1| - 9.2e-11 41.6 0.3 3.3e-10 39.8 0.1 2.0 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|33152476|ref|NP_873829.1| - 0.005 16.3 0.4 0.38 10.2 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Exonuc_X-T_C PF08411.10 gi|33152477|ref|NP_873830.1| - 1.6e-96 322.6 3.2 1.6e-96 322.6 3.2 2.0 3 0 0 3 3 3 1 Exonuclease C-terminal RNase_T PF00929.24 gi|33152477|ref|NP_873830.1| - 3.7e-29 102.4 0.0 7.8e-29 101.3 0.0 1.6 1 0 0 1 1 1 1 Exonuclease Peptidase_S46 PF10459.9 gi|33152477|ref|NP_873830.1| - 0.66 8.6 3.6 1.2 7.7 3.6 1.3 1 0 0 1 1 1 0 Peptidase S46 PHP PF02811.19 gi|33152479|ref|NP_873832.1| - 1e-09 38.9 0.5 1.5e-09 38.4 0.5 1.2 1 0 0 1 1 1 1 PHP domain UvrB_inter PF17757.1 gi|33152480|ref|NP_873833.1| - 6.7e-33 112.7 0.4 2.4e-32 110.9 0.1 2.2 2 0 0 2 2 2 1 UvrB interaction domain UvrB PF12344.8 gi|33152480|ref|NP_873833.1| - 1.5e-21 75.9 4.5 3.4e-21 74.8 4.5 1.7 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|33152480|ref|NP_873833.1| - 1.4e-16 60.9 0.1 5.1e-16 59.0 0.1 2.0 2 0 0 2 2 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|33152480|ref|NP_873833.1| - 1.2e-10 41.7 0.5 8.9e-09 35.6 0.0 2.8 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|33152480|ref|NP_873833.1| - 8.8e-09 34.8 3.5 8.8e-09 34.8 3.5 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif UvrD-helicase PF00580.21 gi|33152480|ref|NP_873833.1| - 0.00054 19.6 6.2 0.11 12.0 4.6 2.4 2 0 0 2 2 2 2 UvrD/REP helicase N-terminal domain DEAD PF00270.29 gi|33152480|ref|NP_873833.1| - 0.00094 19.0 0.1 0.0097 15.7 0.0 2.9 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|33152480|ref|NP_873833.1| - 0.0012 18.6 0.0 0.0099 15.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|33152480|ref|NP_873833.1| - 0.0018 18.6 0.1 1 9.7 0.0 2.8 2 1 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|33152480|ref|NP_873833.1| - 0.026 15.1 1.1 8.2 6.9 0.0 2.7 2 0 0 2 2 2 0 ABC transporter AAA_22 PF13401.6 gi|33152480|ref|NP_873833.1| - 0.085 13.1 0.2 0.74 10.1 0.0 2.8 4 0 0 4 4 4 0 AAA domain DUF87 PF01935.17 gi|33152480|ref|NP_873833.1| - 0.38 10.8 0.0 0.38 10.8 0.0 3.0 3 1 0 3 3 3 0 Helicase HerA, central domain Enkurin PF13864.6 gi|33152480|ref|NP_873833.1| - 1.2 9.7 10.0 4.3 7.8 10.0 2.0 1 0 0 1 1 1 0 Calmodulin-binding FlaG PF03646.15 gi|33152480|ref|NP_873833.1| - 3.9 7.7 11.9 0.26 11.5 4.3 2.6 2 0 0 2 2 2 0 FlaG protein Peptidase_M24 PF00557.24 gi|33152482|ref|NP_873835.1| - 1.1e-57 195.1 0.0 1.4e-57 194.8 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 AMP_N PF05195.16 gi|33152482|ref|NP_873835.1| - 3.6e-33 113.9 0.2 1.1e-32 112.3 0.1 1.8 2 0 0 2 2 2 1 Aminopeptidase P, N-terminal domain YmcE_antitoxin PF15939.5 gi|33152482|ref|NP_873835.1| - 0.024 14.8 0.1 1.8 8.8 0.0 2.6 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system Aminotran_1_2 PF00155.21 gi|33152483|ref|NP_873836.1| - 4.7e-80 269.5 0.1 5.3e-80 269.3 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Flg_hook PF02120.16 gi|33152483|ref|NP_873836.1| - 0.04 13.8 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ATP-grasp PF02222.22 gi|33152485|ref|NP_873838.1| - 6.5e-18 64.9 0.2 8.2e-18 64.6 0.2 1.1 1 0 0 1 1 1 1 ATP-grasp domain AIRC PF00731.20 gi|33152488|ref|NP_873841.1| - 1.4e-62 209.7 1.7 1.6e-62 209.5 1.7 1.0 1 0 0 1 1 1 1 AIR carboxylase Fe-ADH_2 PF13685.6 gi|33152488|ref|NP_873841.1| - 0.0033 17.2 0.2 0.0043 16.8 0.2 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DAGK_cat PF00781.24 gi|33152488|ref|NP_873841.1| - 0.0055 16.3 0.1 3.6 7.2 0.0 2.1 2 0 0 2 2 2 2 Diacylglycerol kinase catalytic domain RraB PF06877.11 gi|33152488|ref|NP_873841.1| - 0.061 14.1 0.0 0.1 13.3 0.0 1.4 1 0 0 1 1 1 0 Regulator of ribonuclease activity B PrpR_N PF06506.11 gi|33152488|ref|NP_873841.1| - 0.085 12.4 0.1 0.18 11.4 0.0 1.6 1 1 0 1 1 1 0 Propionate catabolism activator GST_N PF02798.20 gi|33152489|ref|NP_873842.1| - 2.4e-16 59.8 0.0 3.9e-16 59.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 gi|33152489|ref|NP_873842.1| - 3.4e-15 56.2 0.1 6.1e-15 55.4 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 gi|33152489|ref|NP_873842.1| - 1.8e-13 50.6 0.0 3.3e-13 49.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 gi|33152489|ref|NP_873842.1| - 2e-09 37.5 0.0 3.1e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 gi|33152489|ref|NP_873842.1| - 3.7e-06 26.9 0.0 6.8e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain LXG PF04740.12 gi|33152489|ref|NP_873842.1| - 0.11 12.2 0.1 0.26 10.9 0.0 1.6 2 0 0 2 2 2 0 LXG domain of WXG superfamily SspB PF04386.13 gi|33152490|ref|NP_873843.1| - 5.4e-27 94.6 0.0 6.3e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 Stringent starvation protein B DUF3885 PF13021.6 gi|33152490|ref|NP_873843.1| - 0.022 14.8 0.6 0.048 13.8 0.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3885) HTH_Crp_2 PF13545.6 gi|33152491|ref|NP_873844.1| - 7.1e-18 64.4 0.2 2.8e-17 62.4 0.1 2.0 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 gi|33152491|ref|NP_873844.1| - 7.8e-17 60.6 0.4 1.4e-16 59.8 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family cNMP_binding PF00027.29 gi|33152491|ref|NP_873844.1| - 7.3e-15 54.8 0.0 1.1e-14 54.2 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MarR_2 PF12802.7 gi|33152491|ref|NP_873844.1| - 0.0031 17.4 0.0 0.0074 16.1 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|33152491|ref|NP_873844.1| - 0.075 13.0 0.0 0.25 11.3 0.0 1.9 1 0 0 1 1 1 0 MarR family Usp PF00582.26 gi|33152492|ref|NP_873845.1| - 1.7e-18 67.5 0.0 1.9e-18 67.3 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family ATP_bind_3 PF01171.20 gi|33152492|ref|NP_873845.1| - 0.015 15.1 0.2 0.56 9.9 0.0 2.0 2 0 0 2 2 2 0 PP-loop family tRNA-synt_2c PF01411.19 gi|33152493|ref|NP_873846.1| - 1.1e-229 763.6 0.0 1.5e-229 763.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|33152493|ref|NP_873846.1| - 4.1e-29 101.8 3.8 4.1e-29 101.8 3.8 2.9 3 0 0 3 3 3 1 DHHA1 domain tRNA_SAD PF07973.14 gi|33152493|ref|NP_873846.1| - 8e-19 67.5 0.4 2.3e-18 66.0 0.4 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain betaPIX_CC PF16523.5 gi|33152493|ref|NP_873846.1| - 0.053 13.3 0.4 0.053 13.3 0.4 2.4 3 0 0 3 3 3 0 betaPIX coiled coil Atg14 PF10186.9 gi|33152493|ref|NP_873846.1| - 0.17 11.0 1.5 0.32 10.0 1.5 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PhoU PF01895.19 gi|33152493|ref|NP_873846.1| - 0.3 11.6 2.6 2.2 8.8 0.3 3.1 3 0 0 3 3 3 0 PhoU domain Importin_rep_3 PF18806.1 gi|33152493|ref|NP_873846.1| - 0.69 10.0 2.4 1.2 9.3 0.2 2.6 3 0 0 3 3 3 0 Importin 13 repeat SlyX PF04102.12 gi|33152493|ref|NP_873846.1| - 4.7 7.9 5.3 4.4 8.0 0.7 3.1 2 0 0 2 2 2 0 SlyX CsrA PF02599.16 gi|33152494|ref|NP_873847.1| - 1.1e-27 95.7 0.8 1.3e-27 95.5 0.8 1.1 1 0 0 1 1 1 1 Global regulator protein family NTP_transferase PF00483.23 gi|33152495|ref|NP_873848.1| - 2.7e-25 89.4 0.0 3.5e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|33152495|ref|NP_873848.1| - 3.2e-07 30.9 0.0 6.7e-07 29.8 0.0 1.6 1 1 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|33152495|ref|NP_873848.1| - 0.00092 19.0 0.0 0.0018 18.1 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|33152495|ref|NP_873848.1| - 0.052 13.4 0.1 0.094 12.6 0.1 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Pox_RNA_Pol_22 PF05273.13 gi|33152495|ref|NP_873848.1| - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Poxvirus RNA polymerase 22 kDa subunit PriC PF07445.12 gi|33152496|ref|NP_873849.1| - 9.4e-13 48.5 10.8 1.2e-12 48.1 10.8 1.1 1 0 0 1 1 1 1 Primosomal replication protein priC MTCP1 PF08991.10 gi|33152496|ref|NP_873849.1| - 0.043 14.0 0.7 0.12 12.7 0.4 1.8 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type Porin_4 PF13609.6 gi|33152497|ref|NP_873850.1| - 9e-28 97.9 24.9 1.4e-27 97.3 24.9 1.3 1 1 0 1 1 1 1 Gram-negative porin Porin_1 PF00267.21 gi|33152497|ref|NP_873850.1| - 1.8e-13 50.6 23.5 1.8e-13 50.6 23.5 1.4 1 1 0 1 1 1 1 Gram-negative porin DUF3187 PF11383.8 gi|33152497|ref|NP_873850.1| - 2.2 7.4 10.2 0.21 10.7 4.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3187) Porin_4 PF13609.6 gi|33152499|ref|NP_873852.1| - 1.1e-21 77.9 12.1 1.7e-21 77.3 12.1 1.2 1 0 0 1 1 1 1 Gram-negative porin Porin_1 PF00267.21 gi|33152499|ref|NP_873852.1| - 5.6e-08 32.6 13.0 2.7e-07 30.3 13.0 2.2 1 1 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 gi|33152499|ref|NP_873852.1| - 6.1e-06 26.5 15.8 0.0031 17.7 8.6 3.2 2 1 0 2 2 2 2 Outer membrane protein beta-barrel domain Legionella_OMP PF05150.12 gi|33152499|ref|NP_873852.1| - 0.02 13.8 6.2 0.091 11.7 0.2 3.0 4 0 0 4 4 4 0 Legionella pneumophila major outer membrane protein precursor Secretin PF00263.21 gi|33152500|ref|NP_873853.1| - 2.7e-23 82.5 1.7 2.7e-23 82.5 1.7 2.0 2 1 0 2 2 2 1 Bacterial type II and III secretion system protein Zot PF05707.12 gi|33152500|ref|NP_873853.1| - 1.3e-06 28.2 0.0 2.8e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) DUF2523 PF10734.9 gi|33152501|ref|NP_873854.1| - 9.4e-07 29.3 2.3 2.4e-06 28.0 2.3 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2523) DUF2929 PF11151.8 gi|33152501|ref|NP_873854.1| - 0.32 11.3 5.5 0.49 10.7 5.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) Macoilin PF09726.9 gi|33152502|ref|NP_873855.1| - 0.44 9.0 2.1 0.61 8.6 2.1 1.1 1 0 0 1 1 1 0 Macoilin family CoatB PF10389.9 gi|33152503|ref|NP_873856.1| - 0.023 14.5 4.2 0.023 14.5 4.2 1.9 2 0 0 2 2 2 0 Bacteriophage coat protein B TrbC PF04956.13 gi|33152503|ref|NP_873856.1| - 0.07 13.3 3.1 0.087 13.1 3.1 1.1 1 0 0 1 1 1 0 TrbC/VIRB2 family Putative_G5P PF17426.2 gi|33152505|ref|NP_873858.1| - 1e-49 167.1 0.5 1.1e-49 166.9 0.5 1.0 1 0 0 1 1 1 1 Putative Gamma DNA binding protein G5P Phage_X PF05155.15 gi|33152506|ref|NP_873859.1| - 1.2e-33 115.4 0.0 3e-33 114.1 0.0 1.7 2 0 0 2 2 2 1 Phage X family Phage_CRI PF05144.14 gi|33152506|ref|NP_873859.1| - 1.7e-07 30.9 0.1 4.3e-07 29.5 0.1 1.6 1 1 0 1 1 1 1 Phage replication protein CRI DUF1460 PF07313.12 gi|33152506|ref|NP_873859.1| - 0.0062 16.0 1.0 0.016 14.6 1.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1460) DUF2726 PF10881.8 gi|33152508|ref|NP_873861.1| - 2.4e-19 69.5 0.2 3e-19 69.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2726) DUF559 PF04480.12 gi|33152508|ref|NP_873861.1| - 1e-08 35.0 0.7 1.7e-08 34.2 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 gi|33152508|ref|NP_873861.1| - 4.7e-06 26.7 0.4 7e-06 26.1 0.4 1.2 1 0 0 1 1 1 1 REase_MTES_1575 Lep_receptor_Ig PF06328.11 gi|33152508|ref|NP_873861.1| - 0.0038 17.1 2.0 0.027 14.4 0.1 2.6 2 1 1 3 3 3 1 Ig-like C2-type domain ThrE PF06738.12 gi|33152509|ref|NP_873862.1| - 0.087 12.2 0.1 0.093 12.1 0.1 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter NAPRTase PF04095.16 gi|33152510|ref|NP_873863.1| - 2.4e-66 223.8 0.0 3.3e-66 223.3 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 gi|33152510|ref|NP_873863.1| - 8.3e-12 45.4 0.2 1.7e-11 44.4 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) CoatB PF10389.9 gi|33152511|ref|NP_873864.1| - 0.02 14.7 4.0 0.02 14.7 4.0 1.9 2 0 0 2 2 2 0 Bacteriophage coat protein B Putative_G5P PF17426.2 gi|33152513|ref|NP_873866.1| - 1e-49 167.1 0.5 1.1e-49 166.9 0.5 1.0 1 0 0 1 1 1 1 Putative Gamma DNA binding protein G5P Phage_X PF05155.15 gi|33152514|ref|NP_873867.1| - 1.2e-33 115.4 0.0 3e-33 114.1 0.0 1.7 2 0 0 2 2 2 1 Phage X family Phage_CRI PF05144.14 gi|33152514|ref|NP_873867.1| - 1.7e-07 30.8 0.1 4.4e-07 29.5 0.1 1.6 1 1 0 1 1 1 1 Phage replication protein CRI DUF1460 PF07313.12 gi|33152514|ref|NP_873867.1| - 0.0063 15.9 1.0 0.016 14.6 1.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1460) DUF2726 PF10881.8 gi|33152516|ref|NP_873869.1| - 4.9e-19 68.5 0.2 6.2e-19 68.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2726) DUF559 PF04480.12 gi|33152516|ref|NP_873869.1| - 1.1e-08 34.9 0.7 1.7e-08 34.2 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 gi|33152516|ref|NP_873869.1| - 4.7e-06 26.7 0.4 7e-06 26.1 0.4 1.2 1 0 0 1 1 1 1 REase_MTES_1575 Lep_receptor_Ig PF06328.11 gi|33152516|ref|NP_873869.1| - 0.0041 17.0 2.0 0.027 14.4 0.1 2.6 2 1 1 3 3 3 1 Ig-like C2-type domain ThrE PF06738.12 gi|33152517|ref|NP_873870.1| - 0.087 12.2 0.1 0.093 12.1 0.1 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter NAPRTase PF04095.16 gi|33152518|ref|NP_873871.1| - 2.4e-66 223.8 0.0 3.2e-66 223.4 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 gi|33152518|ref|NP_873871.1| - 8.3e-12 45.4 0.2 1.7e-11 44.4 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) Acetate_kinase PF00871.17 gi|33152519|ref|NP_873872.1| - 4.2e-169 562.4 0.1 4.7e-169 562.2 0.1 1.0 1 0 0 1 1 1 1 Acetokinase family BcrAD_BadFG PF01869.20 gi|33152519|ref|NP_873872.1| - 0.062 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family PTA_PTB PF01515.19 gi|33152520|ref|NP_873873.1| - 1.1e-127 425.7 2.5 1.2e-127 425.7 1.6 1.5 2 0 0 2 2 2 1 Phosphate acetyl/butaryl transferase AAA_26 PF13500.6 gi|33152520|ref|NP_873873.1| - 3.2e-53 180.5 0.3 6.1e-53 179.6 0.3 1.5 1 0 0 1 1 1 1 AAA domain DRTGG PF07085.12 gi|33152520|ref|NP_873873.1| - 9.2e-29 99.3 0.4 2.5e-27 94.7 0.0 2.9 3 0 0 3 3 3 1 DRTGG domain CbiA PF01656.23 gi|33152520|ref|NP_873873.1| - 0.091 12.8 1.6 1.2 9.1 0.8 3.1 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain TruB_N PF01509.18 gi|33152521|ref|NP_873874.1| - 9.2e-57 191.6 0.0 1.3e-56 191.1 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|33152521|ref|NP_873874.1| - 1.4e-19 70.0 0.3 2.8e-19 69.0 0.3 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB-C_2 PF09157.11 gi|33152521|ref|NP_873874.1| - 1e-17 63.9 0.0 1.8e-17 63.1 0.0 1.4 1 0 0 1 1 1 1 Pseudouridine synthase II TruB, C-terminal RBFA PF02033.18 gi|33152522|ref|NP_873875.1| - 1.8e-31 108.7 0.1 2.1e-31 108.5 0.1 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A IF-2 PF11987.8 gi|33152523|ref|NP_873876.1| - 1.1e-36 125.2 1.6 3.4e-36 123.6 1.6 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU PF00009.27 gi|33152523|ref|NP_873876.1| - 1.2e-34 119.6 2.4 1.2e-34 119.6 2.4 3.6 3 1 0 3 3 3 1 Elongation factor Tu GTP binding domain IF2_N PF04760.15 gi|33152523|ref|NP_873876.1| - 1.1e-16 60.3 2.8 3e-16 59.0 2.8 1.8 1 0 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region MMR_HSR1 PF01926.23 gi|33152523|ref|NP_873876.1| - 5.5e-09 36.1 1.3 1e-08 35.2 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|33152523|ref|NP_873876.1| - 9.7e-09 35.5 7.0 2.1e-06 28.0 0.4 3.9 4 0 0 4 4 4 2 Elongation factor Tu domain 2 FeoB_N PF02421.18 gi|33152523|ref|NP_873876.1| - 3.4e-07 29.9 0.0 9.2e-07 28.5 0.0 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 gi|33152523|ref|NP_873876.1| - 1.8e-05 24.2 0.0 5.4e-05 22.7 0.0 1.8 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 gi|33152523|ref|NP_873876.1| - 0.00046 19.8 0.0 0.00046 19.8 0.0 2.3 2 0 0 2 2 2 1 Ras family MMR_HSR1_Xtn PF16897.5 gi|33152523|ref|NP_873876.1| - 0.005 16.8 0.4 0.028 14.4 0.0 2.4 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain IF2_assoc PF08364.11 gi|33152523|ref|NP_873876.1| - 1.9 8.8 8.6 14 6.0 8.6 2.5 1 1 0 1 1 1 0 Bacterial translation initiation factor IF-2 associated region NusA_N PF08529.11 gi|33152524|ref|NP_873877.1| - 4.2e-33 114.3 4.0 4.2e-33 114.3 4.0 2.6 2 0 0 2 2 2 1 NusA N-terminal domain KH_5 PF13184.6 gi|33152524|ref|NP_873877.1| - 1.2e-30 105.4 0.5 1.5e-28 98.7 0.3 2.7 2 0 0 2 2 2 1 NusA-like KH domain HHH_5 PF14520.6 gi|33152524|ref|NP_873877.1| - 4.6e-12 46.4 2.7 1.5e-07 31.9 0.6 3.0 2 0 0 2 2 2 2 Helix-hairpin-helix domain DUF4332 PF14229.6 gi|33152524|ref|NP_873877.1| - 0.00074 19.7 2.7 0.13 12.5 1.2 2.9 1 1 2 3 3 3 1 Domain of unknown function (DUF4332) KH_2 PF07650.17 gi|33152524|ref|NP_873877.1| - 0.0037 17.1 0.0 0.0037 17.1 0.0 3.2 4 0 0 4 4 4 1 KH domain KH_4 PF13083.6 gi|33152524|ref|NP_873877.1| - 0.012 15.5 0.0 0.073 13.0 0.0 2.3 1 0 0 1 1 1 0 KH domain S1 PF00575.23 gi|33152524|ref|NP_873877.1| - 0.033 14.5 0.0 0.13 12.6 0.0 2.0 1 0 0 1 1 1 0 S1 RNA binding domain DUF3539 PF12058.8 gi|33152524|ref|NP_873877.1| - 0.12 12.5 0.1 0.43 10.8 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3539) DUF2666 PF10869.8 gi|33152524|ref|NP_873877.1| - 4.7 7.4 8.3 0.61 10.3 1.8 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2666) DUF150 PF02576.17 gi|33152525|ref|NP_873878.1| - 1.8e-31 108.3 0.4 3.7e-31 107.4 0.2 1.6 2 0 0 2 2 2 1 RimP N-terminal domain DUF150_C PF17384.2 gi|33152525|ref|NP_873878.1| - 3.3e-17 62.4 0.1 1.1e-16 60.7 0.0 1.8 2 0 0 2 2 2 1 RimP C-terminal SH3 domain Mur_ligase_M PF08245.12 gi|33152526|ref|NP_873879.1| - 1.4e-12 48.0 0.0 3.5e-12 46.7 0.0 1.7 1 1 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|33152526|ref|NP_873879.1| - 0.032 14.5 0.0 0.3 11.4 0.0 2.5 1 1 1 3 3 3 0 Mur ligase family, glutamate ligase domain Carboxyl_trans PF01039.22 gi|33152527|ref|NP_873880.1| - 5.8e-13 48.3 0.1 7.4e-13 47.9 0.1 1.2 1 0 0 1 1 1 1 Carboxyl transferase domain zf-ACC PF17848.1 gi|33152527|ref|NP_873880.1| - 4.8e-11 42.5 7.0 1.1e-10 41.4 7.0 1.6 1 0 0 1 1 1 1 Acetyl-coA carboxylase zinc finger domain zf-ribbon_3 PF13248.6 gi|33152527|ref|NP_873880.1| - 0.01 15.2 0.5 1.5 8.3 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zinc-ribbon_6 PF10005.9 gi|33152527|ref|NP_873880.1| - 0.022 15.4 0.5 0.044 14.5 0.3 1.6 2 0 0 2 2 2 0 zinc-ribbon domain Tmemb_55A PF09788.9 gi|33152527|ref|NP_873880.1| - 0.029 13.5 0.3 0.046 12.8 0.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A MazG PF03819.17 gi|33152528|ref|NP_873881.1| - 7e-36 122.3 6.2 3.6e-26 91.1 0.2 2.6 3 0 0 3 3 3 2 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|33152528|ref|NP_873881.1| - 1.8e-06 28.3 4.1 0.0093 16.4 0.4 2.5 2 1 0 2 2 2 2 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 gi|33152528|ref|NP_873881.1| - 0.0093 16.2 1.8 1.7 9.0 0.1 2.7 2 0 0 2 2 2 2 MazG-like family Seryl_tRNA_N PF02403.22 gi|33152528|ref|NP_873881.1| - 1.9 8.7 6.8 7 6.9 2.0 3.3 3 1 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Response_reg PF00072.24 gi|33152529|ref|NP_873882.1| - 4.6e-28 97.6 0.3 6.4e-28 97.2 0.3 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 gi|33152529|ref|NP_873882.1| - 1.2e-20 73.4 0.0 2.3e-20 72.4 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal FleQ PF06490.11 gi|33152529|ref|NP_873882.1| - 0.018 15.4 0.1 0.026 14.9 0.1 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HATPase_c PF02518.26 gi|33152530|ref|NP_873883.1| - 8.4e-17 61.7 0.0 1.5e-16 60.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|33152530|ref|NP_873883.1| - 6.4e-10 38.9 4.4 9.7e-10 38.3 2.8 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|33152530|ref|NP_873883.1| - 3.1e-09 37.1 0.0 2.5e-08 34.1 0.0 2.4 2 0 0 2 2 2 1 HAMP domain CpxA_peri PF16527.5 gi|33152530|ref|NP_873883.1| - 3.4e-05 24.2 3.7 5.7e-05 23.5 0.1 2.5 2 1 0 2 2 2 1 Two-component sensor protein CpxA, periplasmic domain HATPase_c_3 PF13589.6 gi|33152530|ref|NP_873883.1| - 0.00011 22.1 0.0 0.00019 21.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|33152530|ref|NP_873883.1| - 0.00015 21.6 0.0 0.00033 20.5 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 gi|33152530|ref|NP_873883.1| - 0.016 15.1 0.3 0.05 13.6 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain AAA-ATPase_like PF09820.9 gi|33152530|ref|NP_873883.1| - 0.049 13.1 0.4 0.1 12.0 0.4 1.6 1 0 0 1 1 1 0 Predicted AAA-ATPase NIF3 PF01784.18 gi|33152531|ref|NP_873884.1| - 1.2e-61 208.5 0.0 1.5e-61 208.2 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) ZapB PF06005.12 gi|33152532|ref|NP_873885.1| - 3.6e-21 75.4 16.7 3.9e-21 75.3 16.7 1.0 1 0 0 1 1 1 1 Cell division protein ZapB DUF2968 PF11180.8 gi|33152532|ref|NP_873885.1| - 0.00078 19.1 9.7 0.00089 18.9 9.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2968) YabA PF06156.13 gi|33152532|ref|NP_873885.1| - 0.00081 20.0 9.7 0.0012 19.4 9.7 1.3 1 1 0 1 1 1 1 Initiation control protein YabA APG6_N PF17675.1 gi|33152532|ref|NP_873885.1| - 0.0021 18.6 10.7 0.0024 18.4 10.7 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region TMF_DNA_bd PF12329.8 gi|33152532|ref|NP_873885.1| - 0.0069 16.4 11.4 0.0094 15.9 11.4 1.3 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding GAS PF13851.6 gi|33152532|ref|NP_873885.1| - 0.0071 15.7 8.8 0.0084 15.5 8.8 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF3450 PF11932.8 gi|33152532|ref|NP_873885.1| - 0.0089 15.4 8.3 0.0097 15.2 8.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DIMCO_N PF16844.5 gi|33152532|ref|NP_873885.1| - 0.0097 16.2 2.5 0.011 16.0 2.5 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor, N-terminal ERM PF00769.19 gi|33152532|ref|NP_873885.1| - 0.013 15.3 7.8 0.015 15.1 7.8 1.0 1 0 0 1 1 1 0 Ezrin/radixin/moesin family FtsL PF04999.13 gi|33152532|ref|NP_873885.1| - 0.014 15.4 5.2 0.018 15.0 5.1 1.3 1 1 0 1 1 1 0 Cell division protein FtsL KASH_CCD PF14662.6 gi|33152532|ref|NP_873885.1| - 0.015 15.2 10.1 0.018 14.9 10.1 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH KfrA_N PF11740.8 gi|33152532|ref|NP_873885.1| - 0.025 15.3 3.1 0.028 15.1 3.1 1.1 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term DivIC PF04977.15 gi|33152532|ref|NP_873885.1| - 0.031 14.1 11.1 0.025 14.4 9.1 1.7 1 1 1 2 2 2 0 Septum formation initiator CCDC-167 PF15188.6 gi|33152532|ref|NP_873885.1| - 0.032 14.6 9.3 0.045 14.1 9.3 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Bap31_Bap29_C PF18035.1 gi|33152532|ref|NP_873885.1| - 0.033 14.2 6.5 0.042 13.8 6.5 1.2 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Cluap1 PF10234.9 gi|33152532|ref|NP_873885.1| - 0.045 13.1 7.7 0.054 12.9 7.7 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Herpes_UL6 PF01763.16 gi|33152532|ref|NP_873885.1| - 0.046 12.2 5.3 0.045 12.3 5.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Atg14 PF10186.9 gi|33152532|ref|NP_873885.1| - 0.048 12.7 6.1 0.05 12.7 6.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 gi|33152532|ref|NP_873885.1| - 0.049 13.7 9.8 0.053 13.6 9.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ADIP PF11559.8 gi|33152532|ref|NP_873885.1| - 0.057 13.5 8.9 0.067 13.3 8.9 1.0 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding bZIP_1 PF00170.21 gi|33152532|ref|NP_873885.1| - 0.074 13.2 10.0 0.065 13.3 6.9 2.1 1 1 1 2 2 2 0 bZIP transcription factor Spc7 PF08317.11 gi|33152532|ref|NP_873885.1| - 0.079 11.8 8.2 0.085 11.7 8.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Nup54 PF13874.6 gi|33152532|ref|NP_873885.1| - 0.081 13.0 7.3 0.09 12.9 7.3 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF773 PF05600.12 gi|33152532|ref|NP_873885.1| - 0.084 11.6 6.0 0.091 11.5 6.0 1.0 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 Sec34 PF04136.15 gi|33152532|ref|NP_873885.1| - 0.088 12.7 5.4 0.097 12.5 5.4 1.1 1 0 0 1 1 1 0 Sec34-like family Sipho_Gp157 PF05565.11 gi|33152532|ref|NP_873885.1| - 0.098 12.7 6.3 0.17 11.9 6.3 1.4 1 1 0 1 1 1 0 Siphovirus Gp157 BLOC1_2 PF10046.9 gi|33152532|ref|NP_873885.1| - 0.099 13.0 7.6 0.16 12.2 7.6 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4164 PF13747.6 gi|33152532|ref|NP_873885.1| - 0.13 12.6 6.3 0.18 12.1 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) NPV_P10 PF05531.12 gi|33152532|ref|NP_873885.1| - 0.14 12.6 5.2 0.17 12.4 5.2 1.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein NRBF2 PF08961.10 gi|33152532|ref|NP_873885.1| - 0.16 11.6 5.4 0.17 11.5 5.4 1.1 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator K-box PF01486.17 gi|33152532|ref|NP_873885.1| - 0.16 12.1 14.1 0.8 9.9 8.3 2.3 1 1 1 2 2 2 0 K-box region DUF1664 PF07889.12 gi|33152532|ref|NP_873885.1| - 0.19 11.8 5.2 0.37 10.8 5.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Sec20 PF03908.13 gi|33152532|ref|NP_873885.1| - 0.2 11.6 3.0 0.23 11.4 3.0 1.1 1 0 0 1 1 1 0 Sec20 V_ATPase_I PF01496.19 gi|33152532|ref|NP_873885.1| - 0.25 9.2 4.4 0.27 9.1 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family GrpE PF01025.19 gi|33152532|ref|NP_873885.1| - 0.54 9.9 8.4 0.83 9.3 8.4 1.4 1 1 0 1 1 1 0 GrpE HALZ PF02183.18 gi|33152532|ref|NP_873885.1| - 0.57 10.5 9.8 4.9 7.5 8.0 2.4 1 1 1 2 2 2 0 Homeobox associated leucine zipper TSC22 PF01166.18 gi|33152532|ref|NP_873885.1| - 0.59 10.5 11.7 0.92 9.9 7.9 2.1 1 1 1 2 2 2 0 TSC-22/dip/bun family Prominin PF05478.11 gi|33152532|ref|NP_873885.1| - 0.59 8.0 5.8 0.62 7.9 5.8 1.0 1 0 0 1 1 1 0 Prominin ZYG-11_interact PF05884.12 gi|33152532|ref|NP_873885.1| - 0.72 9.2 2.7 0.78 9.1 2.7 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Tho2 PF11262.8 gi|33152532|ref|NP_873885.1| - 1 8.5 5.5 1.2 8.3 5.5 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Macoilin PF09726.9 gi|33152532|ref|NP_873885.1| - 1.1 7.8 7.4 1.1 7.7 7.4 1.0 1 0 0 1 1 1 0 Macoilin family UPF0449 PF15136.6 gi|33152532|ref|NP_873885.1| - 1.4 9.5 9.3 6.4 7.3 9.3 1.9 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 FlaC_arch PF05377.11 gi|33152532|ref|NP_873885.1| - 1.4 9.4 9.7 2.7 8.4 5.0 2.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF2205 PF10224.9 gi|33152532|ref|NP_873885.1| - 1.7 8.7 12.7 2.9 7.9 1.0 2.1 1 1 1 2 2 2 0 Short coiled-coil protein NUDE_C PF04880.13 gi|33152532|ref|NP_873885.1| - 2 8.9 12.4 2.4 8.6 12.4 1.0 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region bZIP_2 PF07716.15 gi|33152532|ref|NP_873885.1| - 2.8 8.1 14.6 1.1 9.4 8.4 2.5 1 1 2 3 3 3 0 Basic region leucine zipper zf-C4H2 PF10146.9 gi|33152532|ref|NP_873885.1| - 3.1 8.0 8.2 5.4 7.3 8.2 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein XhlA PF10779.9 gi|33152532|ref|NP_873885.1| - 5.7 7.2 8.3 5.5 7.3 3.5 2.0 1 1 1 2 2 2 0 Haemolysin XhlA TK PF00265.18 gi|33152533|ref|NP_873886.1| - 2e-64 216.7 1.4 2.3e-64 216.5 1.4 1.0 1 0 0 1 1 1 1 Thymidine kinase AAA_22 PF13401.6 gi|33152533|ref|NP_873886.1| - 3e-06 27.5 0.2 5.8e-06 26.6 0.1 1.5 2 0 0 2 2 2 1 AAA domain KdpD PF02702.17 gi|33152533|ref|NP_873886.1| - 0.0083 15.6 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_30 PF13604.6 gi|33152533|ref|NP_873886.1| - 0.015 15.0 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|33152533|ref|NP_873886.1| - 0.015 15.3 0.8 0.043 13.9 0.8 1.8 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|33152533|ref|NP_873886.1| - 0.02 14.1 0.3 0.03 13.6 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Arc_PepC PF06819.11 gi|33152533|ref|NP_873886.1| - 0.031 14.4 0.1 0.062 13.4 0.1 1.5 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain TniB PF05621.11 gi|33152533|ref|NP_873886.1| - 0.062 12.7 0.1 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein SNF2_N PF00176.23 gi|33152533|ref|NP_873886.1| - 0.073 11.8 0.0 0.095 11.4 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain Peptidase_M22 PF00814.25 gi|33152534|ref|NP_873887.1| - 2.1e-37 129.3 0.1 2.6e-37 129.0 0.1 1.1 1 0 0 1 1 1 1 Glycoprotease family Herpes_VP19C PF03327.14 gi|33152534|ref|NP_873887.1| - 0.036 13.5 0.0 0.064 12.7 0.0 1.4 1 0 0 1 1 1 0 Herpesvirus capsid shell protein VP19C FMN_dh PF01070.18 gi|33152534|ref|NP_873887.1| - 0.1 11.6 0.3 0.17 10.9 0.3 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DAHP_synth_1 PF00793.20 gi|33152535|ref|NP_873888.1| - 3.4e-101 337.7 0.1 4.6e-101 337.3 0.1 1.0 1 0 0 1 1 1 1 DAHP synthetase I family FtsK_SpoIIIE PF01580.18 gi|33152536|ref|NP_873889.1| - 3.7e-67 226.2 0.0 8.6e-67 225.0 0.0 1.6 1 1 0 1 1 1 1 FtsK/SpoIIIE family FtsK_alpha PF17854.1 gi|33152536|ref|NP_873889.1| - 5.9e-30 103.4 0.4 1.9e-29 101.8 0.4 1.9 1 0 0 1 1 1 1 FtsK alpha domain FtsK_4TM PF13491.6 gi|33152536|ref|NP_873889.1| - 3.7e-23 82.1 20.6 5.9e-23 81.4 20.6 1.2 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE FtsK_gamma PF09397.10 gi|33152536|ref|NP_873889.1| - 7.3e-23 80.2 0.1 1.4e-22 79.2 0.1 1.5 1 0 0 1 1 1 1 Ftsk gamma domain AAA_10 PF12846.7 gi|33152536|ref|NP_873889.1| - 9.5e-07 28.1 0.0 0.00072 18.6 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|33152536|ref|NP_873889.1| - 0.00073 19.7 0.1 0.0024 18.0 0.1 1.9 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|33152536|ref|NP_873889.1| - 0.0064 16.8 0.0 0.066 13.5 0.0 2.6 2 1 0 2 2 2 1 AAA domain AsnC_trans_reg PF01037.21 gi|33152537|ref|NP_873890.1| - 1.8e-24 85.5 0.2 3.6e-24 84.5 0.1 1.5 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|33152537|ref|NP_873890.1| - 1.7e-19 69.1 0.9 2.7e-19 68.4 0.9 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|33152537|ref|NP_873890.1| - 1.3e-17 63.4 0.0 2.1e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|33152537|ref|NP_873890.1| - 0.0019 18.1 0.0 0.0038 17.1 0.0 1.4 1 0 0 1 1 1 1 MarR family PheRS_DBD1 PF18552.1 gi|33152537|ref|NP_873890.1| - 0.15 11.8 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 PheRS DNA binding domain 1 DNA_pol_A_exo1 PF01612.20 gi|33152538|ref|NP_873891.1| - 6.4e-42 143.2 0.2 1.1e-41 142.5 0.2 1.4 1 0 0 1 1 1 1 3'-5' exonuclease HRDC PF00570.23 gi|33152538|ref|NP_873891.1| - 7.7e-13 48.2 0.5 2e-12 46.9 0.3 1.8 2 0 0 2 2 2 1 HRDC domain PINIT PF14324.6 gi|33152538|ref|NP_873891.1| - 0.00087 19.6 0.4 0.0016 18.8 0.4 1.5 1 0 0 1 1 1 1 PINIT domain EnY2 PF10163.9 gi|33152538|ref|NP_873891.1| - 0.01 16.2 0.6 0.03 14.7 0.6 1.7 1 0 0 1 1 1 0 Transcription factor e(y)2 RsdA_SigD_bd PF16751.5 gi|33152538|ref|NP_873891.1| - 0.21 11.9 2.6 1.2 9.4 0.0 2.5 2 0 0 2 2 2 0 Anti-sigma-D factor RsdA to sigma factor binding region ROK PF00480.20 gi|33152539|ref|NP_873892.1| - 2.1e-12 47.1 0.0 7.7e-07 28.9 0.0 2.1 2 0 0 2 2 2 2 ROK family Fe_dep_repress PF01325.19 gi|33152539|ref|NP_873892.1| - 0.016 15.4 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|33152539|ref|NP_873892.1| - 0.022 14.7 0.2 0.066 13.2 0.1 1.9 2 0 0 2 2 2 0 MarR family B-block_TFIIIC PF04182.12 gi|33152539|ref|NP_873892.1| - 0.088 13.0 0.0 0.25 11.5 0.0 1.8 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC AAA_26 PF13500.6 gi|33152540|ref|NP_873893.1| - 2.2e-31 109.2 0.0 3e-31 108.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|33152540|ref|NP_873893.1| - 1.1e-09 38.4 0.1 3.5e-09 36.8 0.1 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 gi|33152540|ref|NP_873893.1| - 0.068 12.4 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain NLPC_P60 PF00877.19 gi|33152541|ref|NP_873894.1| - 6.4e-31 106.5 0.0 1.1e-30 105.8 0.0 1.3 1 0 0 1 1 1 1 NlpC/P60 family CHAP PF05257.16 gi|33152541|ref|NP_873894.1| - 0.0032 18.0 0.0 0.0061 17.1 0.0 1.5 1 1 0 1 1 1 1 CHAP domain DUF3573 PF12097.8 gi|33152541|ref|NP_873894.1| - 0.04 12.7 0.1 0.049 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) LPAM_1 PF08139.12 gi|33152541|ref|NP_873894.1| - 0.56 10.8 4.8 1.8 9.2 4.8 1.8 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Bac_DNA_binding PF00216.21 gi|33152542|ref|NP_873895.1| - 4.6e-28 97.3 0.7 5.3e-28 97.1 0.7 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 gi|33152542|ref|NP_873895.1| - 4.5e-09 36.5 0.3 5e-09 36.3 0.3 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 gi|33152542|ref|NP_873895.1| - 1.5e-06 27.9 0.0 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 gi|33152542|ref|NP_873895.1| - 0.00054 20.1 0.1 0.0013 18.9 0.0 1.6 2 0 0 2 2 2 1 CCDC81 eukaryotic HU domain 2 B3_4 PF03483.17 gi|33152543|ref|NP_873896.1| - 4.5e-69 231.6 0.0 7e-69 231.0 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain tRNA_synthFbeta PF17759.1 gi|33152543|ref|NP_873896.1| - 2.1e-54 184.2 0.0 3.5e-54 183.5 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain FDX-ACB PF03147.14 gi|33152543|ref|NP_873896.1| - 1.1e-27 96.2 0.1 2.3e-27 95.3 0.1 1.6 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain tRNA_bind PF01588.20 gi|33152543|ref|NP_873896.1| - 6.8e-26 90.2 0.4 1.5e-25 89.1 0.4 1.7 1 0 0 1 1 1 1 Putative tRNA binding domain B5 PF03484.15 gi|33152543|ref|NP_873896.1| - 1.6e-18 66.7 0.5 5.6e-18 65.0 0.5 2.0 1 0 0 1 1 1 1 tRNA synthetase B5 domain PhetRS_B1 PF18262.1 gi|33152543|ref|NP_873896.1| - 0.00055 20.1 0.1 11 6.4 0.0 3.9 4 0 0 4 4 4 2 Phe-tRNA synthetase beta subunit B1 domain ZinT PF09223.11 gi|33152543|ref|NP_873896.1| - 0.068 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment tRNA-synt_2d PF01409.20 gi|33152544|ref|NP_873897.1| - 1.1e-102 342.7 0.1 1.5e-102 342.3 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Phe_tRNA-synt_N PF02912.18 gi|33152544|ref|NP_873897.1| - 2.4e-25 88.2 1.8 5.3e-25 87.1 1.8 1.6 1 0 0 1 1 1 1 Aminoacyl tRNA synthetase class II, N-terminal domain tRNA_synthFbeta PF17759.1 gi|33152544|ref|NP_873897.1| - 0.0016 17.9 0.0 0.0058 16.1 0.0 1.9 1 1 1 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain Nitroreductase PF00881.24 gi|33152545|ref|NP_873898.1| - 4.5e-26 91.9 0.0 7.3e-26 91.2 0.0 1.4 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|33152545|ref|NP_873898.1| - 1.3e-07 31.4 0.0 8.1e-05 22.3 0.0 2.4 2 0 0 2 2 2 2 Putative TM nitroreductase DUF2310 PF10071.9 gi|33152546|ref|NP_873899.1| - 9.1e-106 352.8 6.2 1e-105 352.6 6.2 1.0 1 0 0 1 1 1 1 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DUF2249 PF10006.9 gi|33152546|ref|NP_873899.1| - 0.11 12.4 0.1 15 5.5 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) PKD_3 PF16820.5 gi|33152546|ref|NP_873899.1| - 0.13 12.0 0.0 0.33 10.7 0.0 1.6 1 0 0 1 1 1 0 PKD-like domain HypA PF01155.19 gi|33152546|ref|NP_873899.1| - 0.17 11.9 1.2 0.32 11.0 1.2 1.6 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Cation_efflux PF01545.21 gi|33152547|ref|NP_873900.1| - 1.2e-37 129.6 19.6 1.6e-37 129.2 19.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|33152547|ref|NP_873900.1| - 3.1e-23 81.7 0.5 4.9e-23 81.0 0.5 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF943 PF06092.12 gi|33152547|ref|NP_873900.1| - 0.046 13.4 1.8 0.22 11.2 0.1 2.2 2 0 0 2 2 2 0 Enterobacterial putative membrane protein (DUF943) YkyA PF10368.9 gi|33152548|ref|NP_873901.1| - 0.079 12.6 1.0 0.17 11.6 1.0 1.5 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Ribosomal_S9 PF00380.19 gi|33152549|ref|NP_873902.1| - 2e-46 157.5 0.3 2.2e-46 157.3 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Flg_hook PF02120.16 gi|33152549|ref|NP_873902.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Ribosomal_L13 PF00572.18 gi|33152550|ref|NP_873903.1| - 1.1e-56 190.4 0.2 1.3e-56 190.2 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 DUF3659 PF12396.8 gi|33152550|ref|NP_873903.1| - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3659) DUF1043 PF06295.12 gi|33152551|ref|NP_873904.1| - 2.3e-40 137.4 2.5 2.6e-40 137.3 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) UPF0242 PF06785.11 gi|33152551|ref|NP_873904.1| - 2.5e-05 24.5 3.8 2.7e-05 24.4 3.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus LapA_dom PF06305.11 gi|33152551|ref|NP_873904.1| - 9.7e-05 22.1 0.9 0.00014 21.6 0.9 1.3 1 0 0 1 1 1 1 Lipopolysaccharide assembly protein A domain DUF29 PF01724.16 gi|33152551|ref|NP_873904.1| - 0.00012 22.4 0.4 0.00015 22.0 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF29 Spore_III_AB PF09548.10 gi|33152551|ref|NP_873904.1| - 0.00056 20.1 0.1 0.00067 19.8 0.1 1.1 1 0 0 1 1 1 1 Stage III sporulation protein AB (spore_III_AB) DUF4407 PF14362.6 gi|33152551|ref|NP_873904.1| - 0.002 17.6 0.4 0.0023 17.3 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) TssO PF17561.2 gi|33152551|ref|NP_873904.1| - 0.011 15.9 1.8 0.016 15.3 1.5 1.4 1 1 0 1 1 1 0 Type VI secretion system, TssO P35 PF02331.15 gi|33152551|ref|NP_873904.1| - 0.028 13.8 0.2 0.037 13.4 0.2 1.3 1 1 0 1 1 1 0 Apoptosis preventing protein DUF3452 PF11934.8 gi|33152551|ref|NP_873904.1| - 0.028 14.0 3.4 0.046 13.3 3.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) DivIC PF04977.15 gi|33152551|ref|NP_873904.1| - 0.042 13.6 4.1 0.068 12.9 4.1 1.4 1 1 0 1 1 1 0 Septum formation initiator ABC_membrane_3 PF13748.6 gi|33152551|ref|NP_873904.1| - 0.054 12.7 0.2 0.067 12.4 0.2 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region PRKG1_interact PF15898.5 gi|33152551|ref|NP_873904.1| - 0.058 14.3 5.4 2.7 9.0 1.7 2.1 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain DALR_1 PF05746.15 gi|33152551|ref|NP_873904.1| - 0.087 13.0 1.4 0.11 12.6 1.4 1.1 1 0 0 1 1 1 0 DALR anticodon binding domain 7tm_7 PF08395.12 gi|33152551|ref|NP_873904.1| - 0.1 11.8 0.2 0.12 11.6 0.2 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor DUF2232 PF09991.9 gi|33152551|ref|NP_873904.1| - 0.21 10.7 0.3 0.24 10.5 0.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) DUF883 PF05957.13 gi|33152551|ref|NP_873904.1| - 0.3 11.7 2.5 20 5.9 0.4 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) Trp_Tyr_perm PF03222.13 gi|33152552|ref|NP_873905.1| - 8.3e-125 416.9 34.5 9.4e-125 416.7 34.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 gi|33152552|ref|NP_873905.1| - 1.2e-06 27.5 20.1 1.2e-06 27.5 20.1 2.2 1 1 0 2 2 2 2 Transmembrane amino acid transporter protein Peptidase_M41 PF01434.18 gi|33152553|ref|NP_873906.1| - 1.6e-61 207.5 0.1 2.8e-61 206.7 0.1 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 gi|33152553|ref|NP_873906.1| - 1.1e-45 155.2 0.0 7.3e-44 149.4 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|33152553|ref|NP_873906.1| - 9.6e-12 44.5 0.0 2.1e-11 43.5 0.0 1.5 1 0 0 1 1 1 1 AAA+ lid domain FtsH_ext PF06480.15 gi|33152553|ref|NP_873906.1| - 1.4e-09 38.2 1.8 1.4e-09 38.2 1.8 1.8 2 0 0 2 2 1 1 FtsH Extracellular AAA_16 PF13191.6 gi|33152553|ref|NP_873906.1| - 1.4e-06 28.8 1.1 3.6e-05 24.2 1.1 3.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 gi|33152553|ref|NP_873906.1| - 3.9e-06 26.9 0.1 3.5e-05 23.8 0.0 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|33152553|ref|NP_873906.1| - 9.8e-06 25.0 0.0 1.8e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 gi|33152553|ref|NP_873906.1| - 0.00027 20.7 0.0 0.0014 18.4 0.0 2.2 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|33152553|ref|NP_873906.1| - 0.00033 20.8 0.0 0.017 15.3 0.0 2.7 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|33152553|ref|NP_873906.1| - 0.004 17.4 0.3 0.2 12.0 0.1 3.1 1 1 2 3 3 3 1 AAA domain Mg_chelatase PF01078.21 gi|33152553|ref|NP_873906.1| - 0.0043 16.5 0.4 0.0093 15.4 0.4 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|33152553|ref|NP_873906.1| - 0.0061 16.7 0.0 0.015 15.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|33152553|ref|NP_873906.1| - 0.0071 16.1 0.1 0.015 15.0 0.1 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_17 PF13207.6 gi|33152553|ref|NP_873906.1| - 0.0083 16.6 0.1 0.033 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|33152553|ref|NP_873906.1| - 0.017 15.4 0.6 0.048 13.9 0.0 2.1 3 0 0 3 3 2 0 AAA domain RNA_helicase PF00910.22 gi|33152553|ref|NP_873906.1| - 0.027 14.8 0.0 1.2 9.6 0.0 2.8 2 0 0 2 2 2 0 RNA helicase AAA_18 PF13238.6 gi|33152553|ref|NP_873906.1| - 0.041 14.4 0.0 0.17 12.4 0.0 2.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|33152553|ref|NP_873906.1| - 0.086 12.8 0.2 1.6 8.6 0.3 2.3 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 gi|33152553|ref|NP_873906.1| - 0.098 12.4 0.0 0.32 10.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|33152553|ref|NP_873906.1| - 0.13 11.8 0.2 0.73 9.3 0.1 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 gi|33152553|ref|NP_873906.1| - 0.16 12.5 0.2 0.74 10.3 0.2 2.1 1 0 0 1 1 1 0 ABC transporter CSTF2_hinge PF14327.6 gi|33152553|ref|NP_873906.1| - 0.21 12.1 0.7 0.52 10.8 0.3 1.9 2 0 0 2 2 1 0 Hinge domain of cleavage stimulation factor subunit 2 Zeta_toxin PF06414.12 gi|33152553|ref|NP_873906.1| - 0.37 10.0 3.0 0.36 10.1 0.7 2.1 2 1 1 3 3 3 0 Zeta toxin PhoH PF02562.16 gi|33152553|ref|NP_873906.1| - 0.37 10.2 1.8 0.44 10.0 0.4 1.7 2 0 0 2 2 2 0 PhoH-like protein FtsJ PF01728.19 gi|33152554|ref|NP_873907.1| - 1.3e-55 188.2 0.0 1.6e-55 188.0 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 gi|33152554|ref|NP_873907.1| - 0.022 15.4 0.2 0.31 11.8 0.2 2.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|33152554|ref|NP_873907.1| - 0.034 13.8 0.0 0.09 12.4 0.0 1.7 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|33152554|ref|NP_873907.1| - 0.059 13.2 0.0 2.5 7.9 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain Reovirus_L2 PF06016.11 gi|33152554|ref|NP_873907.1| - 0.13 9.5 0.0 0.15 9.3 0.0 1.1 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) IMPDH PF00478.25 gi|33152556|ref|NP_873909.1| - 1.4e-159 530.7 6.0 1.5e-159 530.6 6.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|33152556|ref|NP_873909.1| - 6.8e-19 68.1 0.7 3e-09 37.2 0.0 3.6 3 0 0 3 3 3 2 CBS domain FMN_dh PF01070.18 gi|33152556|ref|NP_873909.1| - 7e-10 38.5 10.6 5.5e-09 35.5 8.3 2.5 2 1 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|33152556|ref|NP_873909.1| - 1.3e-09 37.9 14.3 0.0001 21.8 9.6 2.8 1 1 1 2 2 2 2 Nitronate monooxygenase His_biosynth PF00977.21 gi|33152556|ref|NP_873909.1| - 6.9e-05 22.4 0.4 0.0014 18.2 0.1 2.5 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|33152556|ref|NP_873909.1| - 0.00014 21.2 9.9 0.0012 18.1 0.9 2.7 2 1 1 3 3 3 2 Dihydroorotate dehydrogenase Glu_synthase PF01645.17 gi|33152556|ref|NP_873909.1| - 0.0012 18.1 4.8 0.0012 18.1 4.8 1.9 2 1 1 3 3 3 1 Conserved region in glutamate synthase NanE PF04131.14 gi|33152556|ref|NP_873909.1| - 0.0084 15.3 1.5 0.048 12.8 1.5 2.4 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase PK PF00224.21 gi|33152556|ref|NP_873909.1| - 0.014 14.3 0.5 0.21 10.4 0.0 2.6 3 0 0 3 3 3 0 Pyruvate kinase, barrel domain Aldolase PF01081.19 gi|33152556|ref|NP_873909.1| - 0.018 14.4 3.0 0.029 13.8 0.4 2.4 2 1 1 3 3 3 0 KDPG and KHG aldolase Dus PF01207.17 gi|33152556|ref|NP_873909.1| - 0.025 13.7 0.3 0.071 12.2 0.3 1.7 1 1 0 1 1 1 0 Dihydrouridine synthase (Dus) Peptidase_S32 PF05579.13 gi|33152556|ref|NP_873909.1| - 0.027 13.6 0.0 0.046 12.9 0.0 1.3 1 0 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 G3P_antiterm PF04309.12 gi|33152556|ref|NP_873909.1| - 0.038 13.4 0.8 0.49 9.8 0.1 2.6 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator Radical_SAM PF04055.21 gi|33152556|ref|NP_873909.1| - 0.11 12.8 0.1 0.52 10.7 0.1 2.2 1 1 0 1 1 1 0 Radical SAM superfamily ThiG PF05690.14 gi|33152556|ref|NP_873909.1| - 0.74 9.1 10.5 0.32 10.2 4.5 3.0 2 1 1 3 3 3 0 Thiazole biosynthesis protein ThiG GMP_synt_C PF00958.22 gi|33152557|ref|NP_873910.1| - 5.4e-43 145.0 0.0 1.1e-42 144.0 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 gi|33152557|ref|NP_873910.1| - 3.5e-41 141.1 0.0 5.3e-41 140.5 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|33152557|ref|NP_873910.1| - 2.8e-12 46.9 0.0 5.4e-12 45.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase C26 NAD_synthase PF02540.17 gi|33152557|ref|NP_873910.1| - 2e-10 40.2 0.1 2.6e-07 30.0 0.0 2.3 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 gi|33152557|ref|NP_873910.1| - 9.3e-05 21.4 0.0 0.00028 19.8 0.0 1.7 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|33152557|ref|NP_873910.1| - 0.0057 16.4 0.0 0.09 12.4 0.0 2.1 2 0 0 2 2 2 1 Asparagine synthase ThiI PF02568.14 gi|33152557|ref|NP_873910.1| - 0.042 13.4 0.0 0.07 12.7 0.0 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.19 gi|33152557|ref|NP_873910.1| - 0.065 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|33152557|ref|NP_873910.1| - 0.21 11.1 0.0 4.3 6.8 0.0 2.6 3 0 0 3 3 3 0 Queuosine biosynthesis protein QueC Peptidase_C58 PF03543.14 gi|33152558|ref|NP_873911.1| - 8.9e-68 228.0 2.2 8.9e-68 228.0 2.2 3.3 2 0 0 2 2 2 1 Yersinia/Haemophilus virulence surface antigen Haemagg_act PF05860.13 gi|33152558|ref|NP_873911.1| - 3.8e-32 110.7 5.7 3.8e-32 110.7 5.7 5.1 4 0 0 4 4 4 1 haemagglutination activity domain Fil_haemagg_2 PF13332.6 gi|33152558|ref|NP_873911.1| - 2.3e-22 79.9 14.4 2.3e-22 79.9 14.4 13.9 6 3 7 15 15 15 5 Hemagglutinin repeat ESPR PF13018.6 gi|33152558|ref|NP_873911.1| - 5.6e-06 26.0 0.1 1.3e-05 24.9 0.1 1.7 1 0 0 1 1 1 1 Extended Signal Peptide of Type V secretion system Fil_haemagg PF05594.14 gi|33152558|ref|NP_873911.1| - 2.4e-05 24.8 7.8 2.4e-05 24.8 7.8 15.9 6 2 6 12 12 12 3 Haemagluttinin repeat PGM_PMM_I PF02878.16 gi|33152559|ref|NP_873912.1| - 2.5e-37 127.7 0.0 6.3e-37 126.4 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|33152559|ref|NP_873912.1| - 1.1e-26 93.4 0.0 6e-26 91.1 0.0 2.2 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|33152559|ref|NP_873912.1| - 5.2e-16 58.9 0.0 9.2e-16 58.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|33152559|ref|NP_873912.1| - 2e-11 43.9 0.0 5.2e-11 42.6 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACT_4 PF13291.6 gi|33152559|ref|NP_873912.1| - 0.12 13.0 0.0 0.3 11.7 0.0 1.6 1 0 0 1 1 1 0 ACT domain Hexapep PF00132.24 gi|33152560|ref|NP_873913.1| - 2.6e-26 90.3 21.7 1.6e-07 30.8 1.4 5.7 3 1 3 6 6 6 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|33152560|ref|NP_873913.1| - 3e-21 76.4 0.1 4.4e-21 75.9 0.1 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|33152560|ref|NP_873913.1| - 1.1e-13 51.4 0.1 3.9e-13 49.6 0.1 1.7 2 0 0 2 2 2 1 Nucleotidyl transferase Hexapep_2 PF14602.6 gi|33152560|ref|NP_873913.1| - 7.9e-09 35.1 17.9 2e-05 24.2 1.0 5.0 4 1 1 5 5 5 4 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|33152560|ref|NP_873913.1| - 2.1e-06 27.6 0.5 6.1e-06 26.1 0.5 1.9 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|33152560|ref|NP_873913.1| - 5.7e-05 21.5 0.5 0.00013 20.3 0.2 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4954) CofC PF01983.16 gi|33152560|ref|NP_873913.1| - 0.014 14.6 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 Guanylyl transferase CofC like CTP_transf_3 PF02348.19 gi|33152560|ref|NP_873913.1| - 0.019 14.9 0.1 3.3 7.6 0.0 2.4 2 1 0 2 2 2 0 Cytidylyltransferase ACR_tran PF00873.19 gi|33152561|ref|NP_873914.1| - 5.6e-256 852.0 36.3 6.5e-256 851.7 36.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 gi|33152561|ref|NP_873914.1| - 1.5e-09 37.2 30.9 3.4e-06 26.2 11.6 3.0 3 0 0 3 3 3 2 MMPL family SecD_SecF PF02355.16 gi|33152561|ref|NP_873914.1| - 0.00012 21.5 36.0 0.0023 17.3 14.4 3.0 3 0 0 3 3 3 2 Protein export membrane protein PTE PF02126.18 gi|33152561|ref|NP_873914.1| - 0.053 13.0 0.1 0.12 11.7 0.1 1.6 1 0 0 1 1 1 0 Phosphotriesterase family HlyD_D23 PF16576.5 gi|33152562|ref|NP_873915.1| - 1.3e-26 93.1 3.1 2e-26 92.5 3.1 1.3 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 gi|33152562|ref|NP_873915.1| - 4.9e-19 69.0 3.1 6.9e-17 62.1 1.5 2.9 2 0 0 2 2 2 1 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 gi|33152562|ref|NP_873915.1| - 1.2e-07 31.4 0.1 1.2e-06 28.3 0.0 2.7 2 0 0 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 gi|33152562|ref|NP_873915.1| - 2.8e-06 27.1 0.1 0.024 14.4 0.0 2.8 2 0 0 2 2 2 2 Biotin-requiring enzyme RnfC_N PF13375.6 gi|33152562|ref|NP_873915.1| - 0.0067 16.4 0.4 0.037 14.0 0.1 2.3 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain ASFV_J13L PF05568.11 gi|33152562|ref|NP_873915.1| - 0.015 15.1 2.8 0.031 14.0 2.8 1.6 1 1 0 1 1 1 0 African swine fever virus J13L protein SLX9 PF15341.6 gi|33152562|ref|NP_873915.1| - 0.029 14.8 0.3 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 Ribosome biogenesis protein SLX9 PTS_EIIA_1 PF00358.20 gi|33152562|ref|NP_873915.1| - 0.047 13.4 0.6 2.1 8.1 0.0 3.2 4 0 0 4 4 4 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DUF2120 PF09893.9 gi|33152562|ref|NP_873915.1| - 0.13 12.3 0.2 0.78 9.8 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) UPF0242 PF06785.11 gi|33152562|ref|NP_873915.1| - 5.3 7.1 7.8 2.4 8.2 0.4 2.6 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DUF1414 PF07208.11 gi|33152563|ref|NP_873916.1| - 5.6e-21 74.3 0.7 7.6e-21 73.8 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1414) DUF2496 PF10689.9 gi|33152563|ref|NP_873916.1| - 0.051 13.4 0.4 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2496) DUF3413 PF11893.8 gi|33152564|ref|NP_873917.1| - 2.3e-98 328.3 13.8 3.4e-98 327.8 13.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3413) Sulfatase PF00884.23 gi|33152564|ref|NP_873917.1| - 1e-10 41.5 8.8 3.9e-09 36.3 0.2 3.3 2 1 1 3 3 3 2 Sulfatase Bcl-2 PF00452.19 gi|33152564|ref|NP_873917.1| - 0.093 13.4 0.2 18 6.1 0.1 2.6 2 0 0 2 2 2 0 Apoptosis regulator proteins, Bcl-2 family Mor PF08765.11 gi|33152565|ref|NP_873918.1| - 3e-36 123.7 0.0 3.4e-36 123.5 0.0 1.0 1 0 0 1 1 1 1 Mor transcription activator family DUF4250 PF14056.6 gi|33152565|ref|NP_873918.1| - 0.026 14.4 0.1 0.06 13.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) DUF1018 PF06252.12 gi|33152566|ref|NP_873919.1| - 1.6e-27 96.9 1.7 1.8e-27 96.7 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1018) zinc_ribbon_4 PF13717.6 gi|33152568|ref|NP_873921.1| - 0.078 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Prefoldin_2 PF01920.20 gi|33152570|ref|NP_873923.1| - 0.0098 15.8 1.6 0.0098 15.8 1.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit FliS PF02561.14 gi|33152570|ref|NP_873923.1| - 0.022 15.0 0.6 0.025 14.8 0.6 1.0 1 0 0 1 1 1 0 Flagellar protein FliS PerC PF06069.11 gi|33152571|ref|NP_873924.1| - 0.00038 20.7 2.8 0.00044 20.5 2.8 1.1 1 0 0 1 1 1 1 PerC transcriptional activator MIT PF04212.18 gi|33152571|ref|NP_873924.1| - 0.0027 17.8 1.1 0.0041 17.2 1.0 1.4 1 1 0 1 1 1 1 MIT (microtubule interacting and transport) domain fn2 PF00040.19 gi|33152571|ref|NP_873924.1| - 1.3 9.4 8.7 0.36 11.2 3.1 2.2 1 1 1 2 2 2 0 Fibronectin type II domain Phage_Mu_Gam PF07352.12 gi|33152572|ref|NP_873925.1| - 1.3e-38 132.4 0.5 1.7e-38 132.0 0.5 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein FCH PF00611.23 gi|33152572|ref|NP_873925.1| - 0.084 13.2 0.2 0.28 11.5 0.0 1.9 2 0 0 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain AAA_22 PF13401.6 gi|33152574|ref|NP_873927.1| - 3.7e-16 59.6 0.0 6.8e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain HTH_38 PF13936.6 gi|33152574|ref|NP_873927.1| - 0.0001 22.0 0.0 0.00024 20.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain ABC_tran PF00005.27 gi|33152574|ref|NP_873927.1| - 0.00014 22.4 0.2 0.0004 20.9 0.1 2.1 2 1 0 2 2 1 1 ABC transporter LacI PF00356.21 gi|33152574|ref|NP_873927.1| - 0.00019 21.1 0.0 0.00041 20.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family AAA_16 PF13191.6 gi|33152574|ref|NP_873927.1| - 0.00023 21.6 0.0 0.00062 20.2 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain HTH_3 PF01381.22 gi|33152574|ref|NP_873927.1| - 0.00031 20.7 0.0 0.00082 19.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix DUF87 PF01935.17 gi|33152574|ref|NP_873927.1| - 0.00034 20.8 0.0 0.02 15.0 0.0 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain HTH_26 PF13443.6 gi|33152574|ref|NP_873927.1| - 0.00073 19.9 0.1 0.0019 18.6 0.1 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_10 PF04967.12 gi|33152574|ref|NP_873927.1| - 0.00093 18.9 0.0 0.028 14.2 0.0 3.0 3 0 0 3 3 3 1 HTH DNA binding domain HTH_23 PF13384.6 gi|33152574|ref|NP_873927.1| - 0.0015 18.3 0.0 0.0048 16.7 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain Fe_dep_repress PF01325.19 gi|33152574|ref|NP_873927.1| - 0.0017 18.5 0.1 0.0054 16.9 0.1 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain NB-ARC PF00931.22 gi|33152574|ref|NP_873927.1| - 0.0025 17.1 0.1 0.0072 15.5 0.0 1.8 2 0 0 2 2 2 1 NB-ARC domain RsgA_GTPase PF03193.16 gi|33152574|ref|NP_873927.1| - 0.0025 17.7 0.0 0.008 16.1 0.0 1.9 1 0 0 1 1 1 1 RsgA GTPase PRK PF00485.18 gi|33152574|ref|NP_873927.1| - 0.0036 17.1 0.0 0.0061 16.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 gi|33152574|ref|NP_873927.1| - 0.0045 16.7 0.0 0.013 15.3 0.0 1.8 2 0 0 2 2 1 1 AAA domain T2SSE PF00437.20 gi|33152574|ref|NP_873927.1| - 0.0049 16.0 0.0 0.01 14.9 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein HTH_28 PF13518.6 gi|33152574|ref|NP_873927.1| - 0.005 16.9 0.0 0.021 14.9 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain TnsD PF15978.5 gi|33152574|ref|NP_873927.1| - 0.0051 15.9 0.0 0.0086 15.1 0.0 1.3 1 0 0 1 1 1 1 Tn7-like transposition protein D HTH_29 PF13551.6 gi|33152574|ref|NP_873927.1| - 0.0056 16.7 0.0 0.015 15.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn helix CENP-B_N PF04218.13 gi|33152574|ref|NP_873927.1| - 0.0098 15.5 0.5 0.062 12.9 0.0 2.3 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain NACHT PF05729.12 gi|33152574|ref|NP_873927.1| - 0.011 15.7 0.0 0.022 14.7 0.0 1.6 1 0 0 1 1 1 0 NACHT domain Sigma70_r4 PF04545.16 gi|33152574|ref|NP_873927.1| - 0.011 15.2 0.0 0.043 13.3 0.0 2.0 1 0 0 1 1 1 0 Sigma-70, region 4 AAA_29 PF13555.6 gi|33152574|ref|NP_873927.1| - 0.012 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Helicase_RecD PF05127.14 gi|33152574|ref|NP_873927.1| - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 Helicase HTH_11 PF08279.12 gi|33152574|ref|NP_873927.1| - 0.014 15.3 0.3 0.051 13.5 0.1 2.1 2 0 0 2 2 1 0 HTH domain MMR_HSR1 PF01926.23 gi|33152574|ref|NP_873927.1| - 0.016 15.3 0.0 0.039 14.0 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase YdaS_antitoxin PF15943.5 gi|33152574|ref|NP_873927.1| - 0.023 14.6 0.2 0.063 13.2 0.1 1.8 2 0 0 2 2 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_37 PF13744.6 gi|33152574|ref|NP_873927.1| - 0.035 14.0 0.1 0.1 12.5 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|33152574|ref|NP_873927.1| - 0.037 13.6 0.0 0.12 12.0 0.0 2.0 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding SpoIIID PF12116.8 gi|33152574|ref|NP_873927.1| - 0.049 13.7 0.0 6.1 7.0 0.0 2.7 2 0 0 2 2 2 0 Stage III sporulation protein D MarR_2 PF12802.7 gi|33152574|ref|NP_873927.1| - 0.055 13.4 0.0 0.19 11.6 0.0 1.9 2 0 0 2 2 1 0 MarR family HTH_DeoR PF08220.12 gi|33152574|ref|NP_873927.1| - 0.061 13.1 0.1 1.7 8.5 0.0 2.6 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain ATP-synt_ab PF00006.25 gi|33152574|ref|NP_873927.1| - 0.062 13.0 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain HTH_31 PF13560.6 gi|33152574|ref|NP_873927.1| - 0.062 13.7 0.0 0.2 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain MobB PF03205.14 gi|33152574|ref|NP_873927.1| - 0.067 13.1 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.22 gi|33152574|ref|NP_873927.1| - 0.077 13.4 0.0 0.38 11.2 0.0 2.2 1 1 0 1 1 1 0 RNA helicase AAA PF00004.29 gi|33152574|ref|NP_873927.1| - 0.11 12.9 0.1 0.66 10.4 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TraB PF01963.17 gi|33152574|ref|NP_873927.1| - 0.12 12.3 0.1 0.33 10.8 0.0 1.7 2 0 0 2 2 2 0 TraB family HTH_7 PF02796.15 gi|33152574|ref|NP_873927.1| - 0.12 12.5 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase AAA_7 PF12775.7 gi|33152574|ref|NP_873927.1| - 0.14 11.7 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region rve PF00665.26 gi|33152575|ref|NP_873928.1| - 8.8e-11 42.0 0.0 1.7e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain Exog_C PF18026.1 gi|33152576|ref|NP_873929.1| - 0.12 12.5 0.4 28 4.8 0.1 3.2 3 0 0 3 3 3 0 Endo/exonuclease (EXOG) C-terminal domain Peptidase_M22 PF00814.25 gi|33152577|ref|NP_873930.1| - 0.081 12.6 2.0 0.087 12.5 0.7 1.7 1 1 1 2 2 2 0 Glycoprotease family DNA_pol3_delta PF06144.13 gi|33152577|ref|NP_873930.1| - 0.16 11.7 5.1 0.09 12.5 2.4 1.9 2 0 0 2 2 2 0 DNA polymerase III, delta subunit TcdB_N PF12918.7 gi|33152577|ref|NP_873930.1| - 0.28 11.5 4.4 0.36 11.1 0.1 2.9 2 1 1 3 3 3 0 TcdB toxin N-terminal helical domain DUF1664 PF07889.12 gi|33152577|ref|NP_873930.1| - 0.4 10.7 7.1 0.56 10.3 3.8 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|33152577|ref|NP_873930.1| - 1.8 7.4 15.1 1 8.1 12.6 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein HTH_IclR PF09339.10 gi|33152578|ref|NP_873931.1| - 2.6e-05 23.9 0.1 4.7e-05 23.1 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|33152578|ref|NP_873931.1| - 0.0005 19.9 0.1 0.00083 19.2 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|33152578|ref|NP_873931.1| - 0.0011 18.9 0.1 0.0042 17.0 0.0 2.0 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|33152578|ref|NP_873931.1| - 0.0011 18.5 0.0 0.0035 16.8 0.0 1.9 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|33152578|ref|NP_873931.1| - 0.0043 16.9 0.1 0.0067 16.3 0.1 1.3 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|33152578|ref|NP_873931.1| - 0.0067 16.0 0.7 0.025 14.2 0.0 2.1 2 1 0 3 3 3 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 gi|33152578|ref|NP_873931.1| - 0.055 13.3 0.0 0.096 12.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MecA_N PF05223.11 gi|33152578|ref|NP_873931.1| - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain Anti-adapt_IraP PF10796.9 gi|33152580|ref|NP_873933.1| - 0.00043 20.8 0.2 0.00054 20.5 0.2 1.3 1 1 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein SlyX PF04102.12 gi|33152580|ref|NP_873933.1| - 0.00075 20.1 3.1 0.00091 19.8 2.4 1.5 2 0 0 2 2 2 1 SlyX ABC_tran_CTD PF16326.5 gi|33152580|ref|NP_873933.1| - 0.0052 17.0 0.7 0.012 15.8 0.8 1.6 2 0 0 2 2 2 1 ABC transporter C-terminal domain TolA_bind_tri PF16331.5 gi|33152580|ref|NP_873933.1| - 0.035 14.2 1.5 0.057 13.5 1.5 1.3 1 0 0 1 1 1 0 TolA binding protein trimerisation bZIP_2 PF07716.15 gi|33152580|ref|NP_873933.1| - 0.051 13.7 0.5 0.089 12.9 0.5 1.4 1 0 0 1 1 1 0 Basic region leucine zipper DivIC PF04977.15 gi|33152580|ref|NP_873933.1| - 0.057 13.2 0.2 0.085 12.6 0.2 1.3 1 0 0 1 1 1 0 Septum formation initiator BLOC1_2 PF10046.9 gi|33152580|ref|NP_873933.1| - 0.059 13.7 0.2 0.23 11.8 0.1 1.8 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 YvrJ PF12841.7 gi|33152580|ref|NP_873933.1| - 0.074 12.6 0.2 0.2 11.2 0.2 1.7 1 0 0 1 1 1 0 YvrJ protein family Fib_alpha PF08702.10 gi|33152580|ref|NP_873933.1| - 0.11 12.6 0.3 0.33 11.1 0.4 1.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF4349 PF14257.6 gi|33152580|ref|NP_873933.1| - 0.18 11.2 0.2 0.27 10.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) HTH_19 PF12844.7 gi|33152582|ref|NP_873935.1| - 0.0037 17.3 0.0 0.0042 17.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|33152582|ref|NP_873935.1| - 0.18 12.1 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|33152584|ref|NP_873937.1| - 2.2e-08 34.1 0.0 3.2e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_19 PF12844.7 gi|33152584|ref|NP_873937.1| - 0.00023 21.1 0.0 0.00059 19.8 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|33152584|ref|NP_873937.1| - 0.0037 17.3 0.0 0.0076 16.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix MGDG_synth PF06925.11 gi|33152584|ref|NP_873937.1| - 0.0053 16.9 0.0 0.013 15.6 0.0 1.6 2 0 0 2 2 2 1 Monogalactosyldiacylglycerol (MGDG) synthase Gag_p15 PF08723.10 gi|33152584|ref|NP_873937.1| - 0.066 13.4 0.1 0.09 13.0 0.1 1.3 1 0 0 1 1 1 0 Gag protein p15 zf-RING_7 PF02591.15 gi|33152585|ref|NP_873938.1| - 0.0089 16.2 0.8 0.018 15.2 0.8 1.5 1 0 0 1 1 1 1 C4-type zinc ribbon domain TerB_N PF13208.6 gi|33152585|ref|NP_873938.1| - 0.032 14.0 0.0 0.049 13.3 0.0 1.3 1 0 0 1 1 1 0 TerB N-terminal domain ABC_export PF16962.5 gi|33152585|ref|NP_873938.1| - 0.053 12.0 0.1 0.061 11.8 0.1 1.0 1 0 0 1 1 1 0 Putative ABC exporter DUF2721 PF11026.8 gi|33152585|ref|NP_873938.1| - 0.058 13.3 0.0 0.079 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) RHIM PF12721.7 gi|33152586|ref|NP_873939.1| - 0.00056 20.4 1.6 0.0014 19.1 1.6 1.6 1 0 0 1 1 1 1 RIP homotypic interaction motif DUF1542 PF07564.11 gi|33152586|ref|NP_873939.1| - 0.0014 18.6 0.5 0.0029 17.7 0.5 1.5 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1542) SopA PF13981.6 gi|33152586|ref|NP_873939.1| - 0.017 15.6 0.1 0.025 15.0 0.1 1.3 1 0 0 1 1 1 0 SopA-like central domain WGG PF10273.9 gi|33152586|ref|NP_873939.1| - 0.046 14.4 0.0 3.4 8.4 0.1 2.1 2 0 0 2 2 2 0 Pre-rRNA-processing protein TSR2 NAC PF01849.18 gi|33152588|ref|NP_873941.1| - 0.011 15.7 0.3 0.054 13.5 0.1 2.0 2 0 0 2 2 2 0 NAC domain EII-Sor PF03609.14 gi|33152589|ref|NP_873942.1| - 0.46 9.9 4.1 0.13 11.6 0.9 1.7 2 0 0 2 2 2 0 PTS system sorbose-specific iic component Phage_gp49_66 PF13876.6 gi|33152590|ref|NP_873943.1| - 5.6e-30 103.5 0.2 7.7e-30 103.0 0.2 1.2 1 0 0 1 1 1 1 Phage protein (N4 Gp49/phage Sf6 gene 66) family Holin_2-3 PF13272.6 gi|33152591|ref|NP_873944.1| - 7.1e-39 132.3 1.8 8e-39 132.2 1.8 1.0 1 0 0 1 1 1 1 Putative 2/3 transmembrane domain holin DUF4010 PF13194.6 gi|33152591|ref|NP_873944.1| - 0.22 11.2 5.6 1.2 8.7 5.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4010) SLT PF01464.20 gi|33152592|ref|NP_873945.1| - 2.7e-17 62.5 0.0 4.4e-17 61.8 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain DUF4400 PF14348.6 gi|33152592|ref|NP_873945.1| - 0.067 12.7 0.0 0.15 11.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) DUF3300 PF11737.8 gi|33152593|ref|NP_873946.1| - 0.091 12.3 0.2 0.16 11.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3300) G0-G1_switch_2 PF15103.6 gi|33152594|ref|NP_873947.1| - 0.0025 18.2 0.0 0.0033 17.8 0.0 1.2 1 0 0 1 1 1 1 G0/G1 switch protein 2 BST2 PF16716.5 gi|33152594|ref|NP_873947.1| - 0.065 13.8 0.4 0.081 13.5 0.4 1.1 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 LMBR1 PF04791.16 gi|33152594|ref|NP_873947.1| - 0.086 11.7 0.1 0.096 11.6 0.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3486 PF11985.8 gi|33152596|ref|NP_873949.1| - 4.1e-52 177.2 8.7 4.6e-52 177.0 8.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3486) HTH_12 PF08461.10 gi|33152596|ref|NP_873949.1| - 0.003 17.5 0.5 0.014 15.4 0.1 2.3 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_32 PF13565.6 gi|33152596|ref|NP_873949.1| - 0.0037 17.9 0.2 0.027 15.1 0.0 2.4 3 0 0 3 3 3 1 Homeodomain-like domain Peptidase_C98 PF15499.6 gi|33152596|ref|NP_873949.1| - 0.028 13.9 0.2 0.04 13.4 0.2 1.3 1 1 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase Dna2 PF08696.11 gi|33152596|ref|NP_873949.1| - 0.068 13.0 1.4 0.11 12.2 1.1 1.5 1 1 1 2 2 2 0 DNA replication factor Dna2 L27_1 PF09058.10 gi|33152596|ref|NP_873949.1| - 0.08 12.9 0.5 0.39 10.7 0.1 2.2 2 0 0 2 2 2 0 L27_1 HTH_WhiA PF02650.14 gi|33152596|ref|NP_873949.1| - 0.19 12.1 6.2 0.38 11.1 0.0 2.8 2 1 1 3 3 3 0 WhiA C-terminal HTH domain CelTOS PF18659.1 gi|33152596|ref|NP_873949.1| - 0.19 12.2 2.8 4.5 7.7 0.1 2.4 2 0 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites DUF3235 PF11574.8 gi|33152596|ref|NP_873949.1| - 0.24 12.3 3.3 54 4.7 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3235) FIVAR PF07554.13 gi|33152596|ref|NP_873949.1| - 0.26 12.0 6.1 0.59 10.9 1.6 2.5 2 0 0 2 2 2 0 FIVAR domain DUF1788 PF08747.11 gi|33152596|ref|NP_873949.1| - 0.33 11.0 1.5 0.68 9.9 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1788) HisKA_3 PF07730.13 gi|33152596|ref|NP_873949.1| - 0.43 11.1 3.8 1.9 9.1 0.8 2.4 2 0 0 2 2 2 0 Histidine kinase VIT1 PF01988.19 gi|33152596|ref|NP_873949.1| - 2.6 7.9 6.7 1.7 8.5 0.4 2.1 1 1 1 2 2 2 0 VIT family Terminase_6 PF03237.15 gi|33152597|ref|NP_873950.1| - 2e-06 27.6 0.0 3.7e-06 26.8 0.0 1.5 1 1 0 1 1 1 1 Terminase-like family DUF935 PF06074.12 gi|33152598|ref|NP_873951.1| - 6.3e-75 252.9 0.0 7.8e-75 252.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF935) DUF4525 PF15027.6 gi|33152598|ref|NP_873951.1| - 0.024 14.3 0.0 0.34 10.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4525) MCD_N PF17408.2 gi|33152598|ref|NP_873951.1| - 0.058 13.5 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain PBECR2 PF18810.1 gi|33152599|ref|NP_873952.1| - 5.7e-35 120.2 0.0 1.3e-34 119.1 0.0 1.6 1 0 0 1 1 1 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 Phage_Mu_F PF04233.14 gi|33152599|ref|NP_873952.1| - 3e-15 56.9 0.1 5.8e-15 56.0 0.1 1.5 1 0 0 1 1 1 1 Phage Mu protein F like protein Phage_tail_S PF05069.13 gi|33152600|ref|NP_873953.1| - 6.2e-46 155.9 0.0 7e-46 155.7 0.0 1.0 1 0 0 1 1 1 1 Phage virion morphogenesis family APH PF01636.23 gi|33152600|ref|NP_873953.1| - 0.12 12.2 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Spc7 PF08317.11 gi|33152601|ref|NP_873954.1| - 0.29 10.0 11.9 0.41 9.5 11.9 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Ax_dynein_light PF10211.9 gi|33152601|ref|NP_873954.1| - 9 6.2 13.9 14 5.5 13.9 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain DUF2190 PF09956.9 gi|33152602|ref|NP_873955.1| - 2.3e-06 28.0 0.1 2.6e-06 27.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2190) Phage_head_fibr PF11133.8 gi|33152602|ref|NP_873955.1| - 0.0075 15.7 0.0 0.0075 15.7 0.0 1.1 1 0 0 1 1 1 1 Head fiber protein Phage_cap_E PF03864.15 gi|33152603|ref|NP_873956.1| - 0.00019 20.7 0.0 0.00033 19.9 0.0 1.3 1 0 0 1 1 1 1 Phage major capsid protein E DUF1320 PF07030.12 gi|33152604|ref|NP_873957.1| - 3.1e-34 117.8 0.0 5.2e-34 117.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1320) Translat_reg PF01818.17 gi|33152607|ref|NP_873960.1| - 0.1 12.6 0.2 4.4 7.3 0.0 2.2 1 1 1 2 2 2 0 Bacteriophage translational regulator Popeye PF04831.13 gi|33152609|ref|NP_873962.1| - 0.14 12.3 1.2 0.17 12.0 1.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Phage_holin_3_6 PF07332.11 gi|33152609|ref|NP_873962.1| - 1.5 8.8 9.5 1.9 8.5 9.5 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III COX8 PF02285.15 gi|33152609|ref|NP_873962.1| - 2.3 8.2 4.7 0.35 10.8 0.4 1.9 2 1 0 2 2 2 0 Cytochrome oxidase c subunit VIII DASH_Hsk3 PF08227.11 gi|33152610|ref|NP_873963.1| - 0.048 14.0 9.2 31 5.0 0.1 5.8 4 0 0 4 4 4 0 DASH complex subunit Hsk3 like TSC22 PF01166.18 gi|33152610|ref|NP_873963.1| - 0.37 11.1 4.7 3.7 7.9 0.1 3.9 3 0 0 3 3 3 0 TSC-22/dip/bun family Tape_meas_lam_C PF09718.10 gi|33152610|ref|NP_873963.1| - 0.4 10.8 14.7 0.031 14.4 2.1 4.2 4 0 0 4 4 4 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF4251 PF14059.6 gi|33152613|ref|NP_873966.1| - 0.083 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) DUF2163 PF09931.9 gi|33152615|ref|NP_873968.1| - 7.8e-09 35.9 0.1 5.6e-08 33.2 0.1 1.9 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2163) Phage_BR0599 PF09356.10 gi|33152616|ref|NP_873969.1| - 1.4e-15 57.4 0.1 1.5e-15 57.3 0.1 1.0 1 0 0 1 1 1 1 Phage conserved hypothetical protein BR0599 Phage-tail_3 PF13550.6 gi|33152619|ref|NP_873972.1| - 4.4e-19 68.9 0.5 1.3e-18 67.4 0.2 1.9 2 0 0 2 2 2 1 Putative phage tail protein MAM PF00629.23 gi|33152619|ref|NP_873972.1| - 0.0019 18.1 0.1 0.0045 16.9 0.1 1.6 1 0 0 1 1 1 1 MAM domain, meprin/A5/mu MethyltransfD12 PF02086.15 gi|33152620|ref|NP_873973.1| - 0.0083 15.8 0.4 0.14 11.8 0.4 2.3 1 1 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase MukB PF04310.12 gi|33152621|ref|NP_873974.1| - 2.3e-114 380.9 0.1 2.3e-114 380.9 0.1 4.2 4 0 0 4 4 4 1 MukB N-terminal MukB_hinge PF16330.5 gi|33152621|ref|NP_873974.1| - 1.1e-69 233.4 4.8 1.2e-69 233.3 1.1 3.3 2 0 0 2 2 2 1 MukB hinge domain SbcCD_C PF13558.6 gi|33152621|ref|NP_873974.1| - 3.5e-13 49.6 1.2 8.6e-13 48.3 0.1 2.4 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|33152621|ref|NP_873974.1| - 2.3e-07 30.5 0.2 5.1e-07 29.4 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|33152621|ref|NP_873974.1| - 4.2e-05 24.2 0.1 4.2e-05 24.2 0.1 7.1 3 2 1 4 4 4 1 AAA domain APS_kinase PF01583.20 gi|33152621|ref|NP_873974.1| - 0.011 15.6 0.6 0.011 15.6 0.6 2.6 2 0 0 2 2 2 0 Adenylylsulphate kinase SMC_N PF02463.19 gi|33152621|ref|NP_873974.1| - 0.45 9.9 10.5 1.8 7.9 0.9 3.6 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain Exonuc_VII_S PF02609.16 gi|33152621|ref|NP_873974.1| - 8.5 6.5 12.9 0.62 10.2 1.7 4.4 3 0 0 3 3 3 0 Exonuclease VII small subunit MukE PF04288.13 gi|33152622|ref|NP_873975.1| - 2e-115 383.5 0.2 2.3e-115 383.4 0.2 1.0 1 0 0 1 1 1 1 MukE-like family DUF4194 PF13835.6 gi|33152622|ref|NP_873975.1| - 0.00027 20.7 0.7 0.014 15.1 0.7 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4194) AbiEi_4 PF13338.6 gi|33152622|ref|NP_873975.1| - 0.13 12.4 0.6 0.72 10.0 0.6 2.3 1 1 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin MukF_M PF17192.4 gi|33152623|ref|NP_873976.1| - 2.9e-79 264.4 9.1 6.4e-79 263.3 9.1 1.6 1 0 0 1 1 1 1 MukF middle domain MukF_C PF17193.4 gi|33152623|ref|NP_873976.1| - 6.9e-71 237.5 1.3 6.9e-71 237.5 1.3 2.1 2 0 0 2 2 2 1 MukF C-terminal domain KicB PF03882.14 gi|33152623|ref|NP_873976.1| - 3.2e-53 178.8 0.3 7.4e-53 177.7 0.3 1.6 1 0 0 1 1 1 1 MukF winged-helix domain Corona_S2 PF01601.16 gi|33152623|ref|NP_873976.1| - 0.01 14.4 2.0 0.016 13.8 2.0 1.2 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DNA_topoisoIV PF00521.20 gi|33152625|ref|NP_873978.1| - 4e-133 444.4 0.1 5.3e-133 444.0 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|33152625|ref|NP_873978.1| - 2e-09 36.8 0.0 0.011 15.2 0.0 3.8 3 0 0 3 3 3 2 DNA gyrase C-terminal domain, beta-propeller RNase_PH PF01138.21 gi|33152626|ref|NP_873979.1| - 9.3e-44 149.1 0.0 2.4e-21 76.6 0.0 2.6 2 0 0 2 2 2 2 3' exoribonuclease family, domain 1 PNPase PF03726.14 gi|33152626|ref|NP_873979.1| - 7.6e-23 80.8 1.9 7.6e-23 80.8 1.9 2.3 2 0 0 2 2 2 1 Polyribonucleotide nucleotidyltransferase, RNA binding domain RNase_PH_C PF03725.15 gi|33152626|ref|NP_873979.1| - 2.3e-22 78.8 2.5 7e-15 54.8 0.1 3.0 3 0 0 3 3 3 2 3' exoribonuclease family, domain 2 S1 PF00575.23 gi|33152626|ref|NP_873979.1| - 9.9e-19 67.5 8.5 1.3e-18 67.1 3.7 2.8 2 0 0 2 2 2 1 S1 RNA binding domain KH_1 PF00013.29 gi|33152626|ref|NP_873979.1| - 4.8e-10 39.1 1.6 2.9e-09 36.6 0.8 2.6 2 0 0 2 2 2 1 KH domain KH_2 PF07650.17 gi|33152626|ref|NP_873979.1| - 0.0024 17.7 0.6 0.018 14.9 0.0 2.6 2 0 0 2 2 2 1 KH domain SLS PF14611.6 gi|33152626|ref|NP_873979.1| - 0.031 14.1 1.3 0.036 13.9 0.2 1.6 2 0 0 2 2 2 0 Mitochondrial inner-membrane-bound regulator S1_2 PF13509.6 gi|33152626|ref|NP_873979.1| - 0.039 14.0 0.0 0.19 11.8 0.0 2.3 2 1 0 2 2 2 0 S1 domain Cauli_DNA-bind PF03310.13 gi|33152626|ref|NP_873979.1| - 0.15 12.1 0.3 0.82 9.7 0.0 2.4 3 0 0 3 3 3 0 Caulimovirus DNA-binding protein TPR_1 PF00515.28 gi|33152627|ref|NP_873980.1| - 7.2e-18 63.6 9.9 1.2e-05 24.9 2.2 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|33152627|ref|NP_873980.1| - 3.9e-16 57.8 13.5 2.6e-05 24.0 1.9 4.7 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|33152627|ref|NP_873980.1| - 1.6e-11 44.2 2.3 2.7e-07 30.6 0.6 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33152627|ref|NP_873980.1| - 6.7e-07 29.0 8.4 0.14 12.4 0.5 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|33152627|ref|NP_873980.1| - 6.5e-06 26.7 13.3 0.3 11.8 0.7 4.4 4 1 1 5 5 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33152627|ref|NP_873980.1| - 3e-05 24.2 10.0 0.0029 17.8 3.2 3.9 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|33152627|ref|NP_873980.1| - 6.5e-05 22.5 6.5 0.002 17.8 0.5 4.3 2 1 2 4 4 4 1 TPR repeat TPR_17 PF13431.6 gi|33152627|ref|NP_873980.1| - 7.5e-05 22.8 7.3 4.8 7.8 0.1 5.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33152627|ref|NP_873980.1| - 0.00018 22.0 3.5 0.0025 18.3 0.3 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|33152627|ref|NP_873980.1| - 0.00045 20.8 4.6 0.55 11.2 0.2 3.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|33152627|ref|NP_873980.1| - 0.0045 17.5 9.0 2.1 9.2 0.2 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|33152627|ref|NP_873980.1| - 0.017 15.4 3.6 1.9 8.8 1.0 2.7 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|33152627|ref|NP_873980.1| - 0.34 11.0 8.3 3.4 7.9 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat LPAM_1 PF08139.12 gi|33152627|ref|NP_873980.1| - 0.53 10.9 2.4 1.1 9.9 2.4 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site TPR_10 PF13374.6 gi|33152627|ref|NP_873980.1| - 0.83 9.6 3.2 13 5.8 0.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DEAD PF00270.29 gi|33152628|ref|NP_873981.1| - 2.8e-52 177.0 0.2 5.4e-51 172.8 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|33152628|ref|NP_873981.1| - 1.7e-32 112.0 0.0 2e-29 102.1 0.1 2.8 3 0 0 3 3 3 2 Helicase conserved C-terminal domain DbpA PF03880.15 gi|33152628|ref|NP_873981.1| - 4.4e-19 68.2 0.1 1.2e-18 66.9 0.1 1.8 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.15 gi|33152628|ref|NP_873981.1| - 2.9e-06 27.4 0.0 7.7e-06 26.0 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|33152628|ref|NP_873981.1| - 7.2e-05 22.3 0.0 0.00025 20.5 0.0 1.9 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit DRTGG PF07085.12 gi|33152628|ref|NP_873981.1| - 0.086 12.6 0.0 0.34 10.7 0.0 1.9 2 0 0 2 2 2 0 DRTGG domain dCMP_cyt_deam_1 PF00383.23 gi|33152629|ref|NP_873982.1| - 9.3e-29 99.3 0.0 1.4e-28 98.8 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|33152629|ref|NP_873982.1| - 3.1e-27 95.0 0.0 4.3e-27 94.6 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|33152629|ref|NP_873982.1| - 1.1e-05 25.5 0.1 6.6e-05 23.0 0.0 2.1 2 0 0 2 2 2 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 gi|33152629|ref|NP_873982.1| - 0.00071 19.7 0.1 0.0016 18.6 0.0 1.6 2 0 0 2 2 2 1 APOBEC3 APOBEC2 PF18772.1 gi|33152629|ref|NP_873982.1| - 0.00072 19.6 0.0 0.0019 18.3 0.0 1.7 2 0 0 2 2 2 1 APOBEC2 Bd3614-deam PF14439.6 gi|33152629|ref|NP_873982.1| - 0.00087 19.4 1.3 0.0033 17.5 1.3 1.9 1 1 0 1 1 1 1 Bd3614-like deaminase NAD2 PF18782.1 gi|33152629|ref|NP_873982.1| - 0.0019 18.3 0.3 0.0058 16.8 0.0 1.9 3 0 0 3 3 3 1 Novel AID APOBEC clade 2 NAD1 PF18778.1 gi|33152629|ref|NP_873982.1| - 0.0022 18.1 0.2 0.0056 16.8 0.0 1.7 2 0 0 2 2 2 1 Novel AID APOBEC clade 1 APOBEC_N PF08210.11 gi|33152629|ref|NP_873982.1| - 0.0047 16.8 0.1 0.0061 16.5 0.1 1.5 1 1 0 1 1 1 1 APOBEC-like N-terminal domain Inv-AAD PF18785.1 gi|33152629|ref|NP_873982.1| - 0.12 12.2 0.5 0.49 10.3 0.1 2.1 2 1 0 2 2 2 0 Invertebrate-AID/APOBEC-deaminase SNO PF01174.19 gi|33152630|ref|NP_873983.1| - 2.4e-63 213.4 0.1 2.6e-63 213.3 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|33152630|ref|NP_873983.1| - 1.6e-07 31.1 0.1 2.8e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|33152630|ref|NP_873983.1| - 4.5e-06 26.6 0.0 8.4e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|33152630|ref|NP_873983.1| - 0.0005 19.9 0.1 0.00072 19.4 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|33152630|ref|NP_873983.1| - 0.012 15.3 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 ThiJ/PfpI family-like Peptidase_S51 PF03575.17 gi|33152630|ref|NP_873983.1| - 0.029 14.0 0.1 0.042 13.5 0.1 1.2 1 0 0 1 1 1 0 Peptidase family S51 Peptidase_C26 PF07722.13 gi|33152630|ref|NP_873983.1| - 0.26 11.0 1.7 4 7.1 0.1 2.6 2 1 1 3 3 3 0 Peptidase C26 SOR_SNZ PF01680.17 gi|33152631|ref|NP_873984.1| - 2.3e-105 350.9 6.5 2.9e-105 350.6 6.5 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|33152631|ref|NP_873984.1| - 1.3e-11 44.3 4.2 5.7e-08 32.4 0.1 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|33152631|ref|NP_873984.1| - 1.3e-05 24.5 0.1 0.065 12.3 0.0 2.4 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|33152631|ref|NP_873984.1| - 2.6e-05 23.8 5.5 0.0014 18.1 0.0 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase NanE PF04131.14 gi|33152631|ref|NP_873984.1| - 0.00028 20.2 0.9 0.0064 15.7 0.0 2.5 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|33152631|ref|NP_873984.1| - 0.00055 19.5 0.3 0.095 12.1 0.0 2.5 3 0 0 3 3 3 1 Histidine biosynthesis protein IGPS PF00218.21 gi|33152631|ref|NP_873984.1| - 0.00066 18.9 0.6 0.035 13.3 0.0 2.5 2 1 0 2 2 2 1 Indole-3-glycerol phosphate synthase TetR_C_27 PF17935.1 gi|33152631|ref|NP_873984.1| - 0.0045 17.0 0.0 0.014 15.5 0.0 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain OMPdecase PF00215.24 gi|33152631|ref|NP_873984.1| - 0.0073 15.9 0.1 0.58 9.7 0.0 2.2 1 1 1 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family IMPDH PF00478.25 gi|33152631|ref|NP_873984.1| - 0.0076 15.3 0.8 0.015 14.3 0.7 1.6 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|33152631|ref|NP_873984.1| - 0.014 14.5 0.7 0.036 13.1 0.0 1.9 2 1 0 2 2 2 0 FMN-dependent dehydrogenase DUF561 PF04481.12 gi|33152631|ref|NP_873984.1| - 0.027 13.7 0.1 2.3 7.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF561) TMP-TENI PF02581.17 gi|33152631|ref|NP_873984.1| - 0.091 12.1 1.4 1.6 8.0 0.1 2.4 2 0 0 2 2 2 0 Thiamine monophosphate synthase Aminotran_1_2 PF00155.21 gi|33152633|ref|NP_873986.1| - 5.5e-14 52.1 0.0 7.4e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II GntR PF00392.21 gi|33152633|ref|NP_873986.1| - 2.3e-08 33.6 0.0 5e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|33152633|ref|NP_873986.1| - 0.019 14.5 0.0 0.047 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|33152633|ref|NP_873986.1| - 0.02 14.8 0.0 0.23 11.5 0.0 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|33152633|ref|NP_873986.1| - 0.021 14.8 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|33152633|ref|NP_873986.1| - 0.045 13.7 0.0 0.14 12.1 0.0 1.9 1 0 0 1 1 1 0 HTH domain CNH PF00780.22 gi|33152633|ref|NP_873986.1| - 0.065 12.8 0.0 0.16 11.5 0.0 1.7 2 0 0 2 2 2 0 CNH domain Rrf2 PF02082.20 gi|33152633|ref|NP_873986.1| - 0.16 12.4 0.1 0.47 10.8 0.1 1.8 2 0 0 2 2 2 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|33152633|ref|NP_873986.1| - 0.16 12.2 0.0 0.42 10.8 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain ERCC4 PF02732.15 gi|33152633|ref|NP_873986.1| - 0.19 11.9 1.3 0.41 10.8 0.3 2.1 2 0 0 2 2 2 0 ERCC4 domain RRF PF01765.19 gi|33152634|ref|NP_873987.1| - 2.1e-63 213.1 3.0 2.1e-63 213.1 3.0 1.4 1 1 0 1 1 1 1 Ribosome recycling factor TPP1 PF10341.9 gi|33152634|ref|NP_873987.1| - 0.033 14.2 0.1 0.045 13.7 0.1 1.5 1 1 0 1 1 1 0 Shelterin complex subunit, TPP1/ACD DGF-1_C PF11040.8 gi|33152634|ref|NP_873987.1| - 0.086 12.8 0.4 2 8.5 0.2 2.3 2 0 0 2 2 2 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus AcylCoA_dehyd_C PF12186.8 gi|33152634|ref|NP_873987.1| - 0.6 10.2 3.6 0.9 9.7 0.9 2.2 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal DUF4168 PF13767.6 gi|33152634|ref|NP_873987.1| - 3.7 8.8 7.6 4.9 8.4 1.9 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF4168) AA_kinase PF00696.28 gi|33152635|ref|NP_873988.1| - 1.1e-26 93.9 0.2 1.3e-26 93.6 0.2 1.0 1 0 0 1 1 1 1 Amino acid kinase family Sulfatase PF00884.23 gi|33152636|ref|NP_873989.1| - 2.4e-31 109.3 0.2 3.8e-31 108.6 0.2 1.3 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|33152636|ref|NP_873989.1| - 0.026 14.1 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase EptA_B_N PF08019.12 gi|33152636|ref|NP_873989.1| - 0.14 12.0 9.4 0.04 13.8 5.8 1.9 1 1 0 2 2 2 0 Phosphoethanolamine transferase EptA/EptB DUF420 PF04238.12 gi|33152636|ref|NP_873989.1| - 0.25 11.6 8.2 4.2 7.7 1.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF420) Borrelia_orfD PF02999.14 gi|33152636|ref|NP_873989.1| - 0.45 10.9 3.3 0.25 11.7 0.9 1.8 2 0 0 2 2 2 0 Borrelia orf-D family EF_TS PF00889.19 gi|33152637|ref|NP_873990.1| - 6.4e-65 218.7 2.2 8.6e-65 218.2 2.2 1.2 1 0 0 1 1 1 1 Elongation factor TS HSCB_C PF07743.13 gi|33152637|ref|NP_873990.1| - 2.7 8.5 5.2 6.5 7.3 0.1 3.0 3 0 0 3 3 3 0 HSCB C-terminal oligomerisation domain Ribosomal_S2 PF00318.20 gi|33152638|ref|NP_873991.1| - 2.9e-90 301.2 0.0 3.3e-90 301.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S2 DUF853 PF05872.12 gi|33152639|ref|NP_873992.1| - 2.7e-223 742.1 0.5 3e-223 742.0 0.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) DUF87 PF01935.17 gi|33152639|ref|NP_873992.1| - 6.9e-10 39.4 0.1 4.7e-09 36.7 0.0 2.0 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|33152639|ref|NP_873992.1| - 1.2e-05 25.6 0.6 0.0029 17.9 0.0 3.3 3 0 0 3 3 3 1 AAA domain AAA_10 PF12846.7 gi|33152639|ref|NP_873992.1| - 1.2e-05 24.4 0.3 0.042 12.8 0.0 2.8 3 0 0 3 3 3 2 AAA-like domain FtsK_SpoIIIE PF01580.18 gi|33152639|ref|NP_873992.1| - 2e-05 24.1 0.2 0.00012 21.5 0.1 2.2 2 0 0 2 2 2 1 FtsK/SpoIIIE family ResIII PF04851.15 gi|33152639|ref|NP_873992.1| - 5.3e-05 23.3 1.7 0.0018 18.3 0.1 2.8 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit CbiA PF01656.23 gi|33152639|ref|NP_873992.1| - 8.1e-05 22.7 0.0 0.00022 21.3 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain TrwB_AAD_bind PF10412.9 gi|33152639|ref|NP_873992.1| - 0.00018 20.5 1.1 0.00025 20.1 0.1 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 gi|33152639|ref|NP_873992.1| - 0.00021 21.7 1.7 0.017 15.5 0.1 3.0 1 1 2 3 3 3 1 AAA ATPase domain AAA_30 PF13604.6 gi|33152639|ref|NP_873992.1| - 0.00052 19.8 1.0 0.0013 18.5 0.3 2.2 3 1 0 3 3 3 1 AAA domain AAA_5 PF07728.14 gi|33152639|ref|NP_873992.1| - 0.0018 18.3 0.1 1.3 9.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) DUF2075 PF09848.9 gi|33152639|ref|NP_873992.1| - 0.0033 16.7 0.2 2.1 7.5 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 gi|33152639|ref|NP_873992.1| - 0.0045 17.4 0.1 1.6 9.2 0.1 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 gi|33152639|ref|NP_873992.1| - 0.006 16.2 0.2 0.016 14.8 0.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_6 PF12774.7 gi|33152639|ref|NP_873992.1| - 0.011 14.7 1.1 0.093 11.7 0.1 2.1 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region T2SSE PF00437.20 gi|33152639|ref|NP_873992.1| - 0.024 13.7 0.0 0.05 12.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein ATPase_2 PF01637.18 gi|33152639|ref|NP_873992.1| - 0.032 14.1 1.6 7.3 6.4 1.9 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|33152639|ref|NP_873992.1| - 0.034 13.7 0.0 0.062 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region DNA_pol_A_exo1 PF01612.20 gi|33152639|ref|NP_873992.1| - 0.044 13.5 0.0 0.097 12.4 0.0 1.6 1 0 0 1 1 1 0 3'-5' exonuclease AAA_19 PF13245.6 gi|33152639|ref|NP_873992.1| - 0.047 14.0 0.1 0.16 12.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain Zot PF05707.12 gi|33152639|ref|NP_873992.1| - 0.062 12.9 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_28 PF13521.6 gi|33152639|ref|NP_873992.1| - 0.099 12.9 0.1 0.23 11.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain RecO_C PF02565.15 gi|33152640|ref|NP_873993.1| - 1.3e-26 93.2 0.5 2e-26 92.6 0.5 1.2 1 0 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 gi|33152640|ref|NP_873993.1| - 2.2e-26 91.6 0.0 3.8e-26 90.9 0.0 1.4 1 0 0 1 1 1 1 Recombination protein O N terminal RecO_N_2 PF13114.6 gi|33152640|ref|NP_873993.1| - 0.012 15.4 0.0 0.036 13.8 0.0 1.8 1 0 0 1 1 1 0 RecO N terminal MMR_HSR1 PF01926.23 gi|33152641|ref|NP_873994.1| - 1.9e-24 85.9 0.3 3.3e-24 85.2 0.3 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase KH_2 PF07650.17 gi|33152641|ref|NP_873994.1| - 2.2e-19 69.0 1.4 2.2e-19 69.0 1.4 2.4 2 0 0 2 2 2 1 KH domain FeoB_N PF02421.18 gi|33152641|ref|NP_873994.1| - 1.6e-15 57.0 0.4 2.6e-15 56.3 0.4 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|33152641|ref|NP_873994.1| - 1.3e-09 37.9 1.7 4.2e-08 33.0 1.6 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|33152641|ref|NP_873994.1| - 1.5e-08 34.9 0.5 2.1e-05 24.6 0.2 2.3 1 1 1 2 2 2 2 Dynamin family AIG1 PF04548.16 gi|33152641|ref|NP_873994.1| - 1.7e-08 34.1 0.1 3.5e-08 33.0 0.1 1.5 1 0 0 1 1 1 1 AIG1 family RsgA_GTPase PF03193.16 gi|33152641|ref|NP_873994.1| - 2.5e-08 34.0 1.3 0.00039 20.4 0.1 2.2 1 1 1 2 2 2 2 RsgA GTPase PduV-EutP PF10662.9 gi|33152641|ref|NP_873994.1| - 3.6e-06 26.8 0.7 1.8e-05 24.5 0.7 2.0 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 gi|33152641|ref|NP_873994.1| - 5.1e-05 23.6 0.0 0.00011 22.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain Ras PF00071.22 gi|33152641|ref|NP_873994.1| - 0.00095 18.8 0.2 0.022 14.4 0.1 2.4 2 1 0 2 2 2 1 Ras family Roc PF08477.13 gi|33152641|ref|NP_873994.1| - 0.0016 18.7 0.5 0.0048 17.1 0.2 2.0 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase DUF521 PF04412.13 gi|33152641|ref|NP_873994.1| - 0.0048 15.7 0.0 0.0074 15.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) cobW PF02492.19 gi|33152641|ref|NP_873994.1| - 0.01 15.5 2.3 0.34 10.5 0.4 2.3 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRPRB PF09439.10 gi|33152641|ref|NP_873994.1| - 0.015 14.8 0.2 0.037 13.5 0.1 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 gi|33152641|ref|NP_873994.1| - 0.027 14.9 0.1 0.27 11.6 0.1 2.6 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|33152641|ref|NP_873994.1| - 0.029 14.9 1.1 0.079 13.5 0.9 2.0 1 1 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 gi|33152641|ref|NP_873994.1| - 0.043 13.0 0.1 0.13 11.5 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1_Xtn PF16897.5 gi|33152641|ref|NP_873994.1| - 0.087 12.8 0.1 0.2 11.7 0.1 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain YscW PF09619.10 gi|33152641|ref|NP_873994.1| - 0.11 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Type III secretion system lipoprotein chaperone (YscW) ATP_bind_1 PF03029.17 gi|33152641|ref|NP_873994.1| - 0.14 11.9 0.1 1.7 8.4 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 gi|33152641|ref|NP_873994.1| - 0.15 12.5 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Ribonucleas_3_3 PF14622.6 gi|33152642|ref|NP_873995.1| - 7.2e-35 119.9 0.1 1.1e-34 119.3 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 gi|33152642|ref|NP_873995.1| - 4.8e-23 81.8 0.0 8.8e-23 80.9 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 gi|33152642|ref|NP_873995.1| - 3.3e-15 56.5 0.0 5.1e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 gi|33152642|ref|NP_873995.1| - 0.0015 18.7 0.0 0.004 17.4 0.0 1.7 1 1 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 Peptidase_S24 PF00717.23 gi|33152643|ref|NP_873996.1| - 1.7e-20 72.7 0.1 3.1e-20 71.9 0.1 1.5 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 gi|33152643|ref|NP_873996.1| - 1.2e-08 34.9 0.1 2e-06 27.6 0.0 2.6 2 1 0 2 2 2 2 Signal peptidase, peptidase S26 GTP_EFTU PF00009.27 gi|33152644|ref|NP_873997.1| - 1.3e-54 184.7 0.1 2.2e-54 183.9 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 gi|33152644|ref|NP_873997.1| - 1e-49 167.1 3.0 1.8e-49 166.4 3.0 1.4 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 gi|33152644|ref|NP_873997.1| - 5.8e-20 71.1 0.0 1.5e-19 69.8 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|33152644|ref|NP_873997.1| - 2.5e-12 47.0 1.6 6.2e-12 45.7 1.6 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Ras PF00071.22 gi|33152644|ref|NP_873997.1| - 9.2e-06 25.3 0.0 1.6e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 gi|33152644|ref|NP_873997.1| - 3.1e-05 24.0 0.0 8.4e-05 22.6 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 gi|33152644|ref|NP_873997.1| - 0.00034 20.7 0.0 0.0012 18.9 0.0 2.0 1 1 0 1 1 1 1 Elongation Factor G, domain II PduV-EutP PF10662.9 gi|33152644|ref|NP_873997.1| - 0.014 15.1 0.1 0.044 13.5 0.0 1.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 gi|33152644|ref|NP_873997.1| - 0.029 13.8 0.0 0.075 12.5 0.0 1.7 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit RF3_C PF16658.5 gi|33152644|ref|NP_873997.1| - 0.046 13.5 0.0 0.089 12.6 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain MMR_HSR1_Xtn PF16897.5 gi|33152644|ref|NP_873997.1| - 0.1 12.6 0.0 0.26 11.3 0.0 1.7 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain SWIRM PF04433.17 gi|33152647|ref|NP_874000.1| - 0.014 15.7 0.2 0.026 14.9 0.1 1.5 1 1 0 1 1 1 0 SWIRM domain DDE_Tnp_IS1595 PF12762.7 gi|33152648|ref|NP_874001.1| - 5.8e-46 156.3 5.3 9.1e-46 155.6 5.3 1.3 1 0 0 1 1 1 1 ISXO2-like transposase domain Zn_Tnp_IS1595 PF12760.7 gi|33152648|ref|NP_874001.1| - 2.8e-15 56.0 5.0 5.4e-15 55.1 5.0 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain PRY PF13765.6 gi|33152648|ref|NP_874001.1| - 0.0087 15.7 0.1 0.024 14.3 0.1 1.7 1 0 0 1 1 1 1 SPRY-associated domain OrfB_Zn_ribbon PF07282.11 gi|33152648|ref|NP_874001.1| - 0.14 12.1 2.5 0.35 10.8 2.5 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-BED PF02892.15 gi|33152648|ref|NP_874001.1| - 0.8 9.8 8.2 0.55 10.3 2.1 2.7 1 1 1 2 2 2 0 BED zinc finger zinc_ribbon_4 PF13717.6 gi|33152648|ref|NP_874001.1| - 4.1 7.4 6.0 5.4 7.0 0.8 2.5 2 0 0 2 2 2 0 zinc-ribbon domain HTH_3 PF01381.22 gi|33152649|ref|NP_874002.1| - 6e-10 39.0 0.0 9.4e-10 38.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|33152649|ref|NP_874002.1| - 1.2e-09 38.1 0.0 2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|33152649|ref|NP_874002.1| - 6e-06 26.3 0.0 8.4e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_26 PF13443.6 gi|33152649|ref|NP_874002.1| - 8.3e-05 23.0 0.0 0.00015 22.1 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain DUF2802 PF10975.8 gi|33152649|ref|NP_874002.1| - 0.08 13.1 0.0 12 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2802) UBA_4 PF14555.6 gi|33152649|ref|NP_874002.1| - 0.15 11.9 0.0 0.49 10.3 0.0 1.8 2 0 0 2 2 2 0 UBA-like domain DUF4065 PF13274.6 gi|33152650|ref|NP_874003.1| - 1.1e-22 81.0 0.3 2.2e-22 80.1 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF4065) Importin_rep_6 PF18829.1 gi|33152650|ref|NP_874003.1| - 0.045 13.9 0.0 0.063 13.4 0.0 1.3 1 0 0 1 1 1 0 Importin repeat 6 Hamartin PF04388.12 gi|33152650|ref|NP_874003.1| - 0.065 11.9 0.0 0.089 11.5 0.0 1.1 1 0 0 1 1 1 0 Hamartin protein DDE_Tnp_IS1595 PF12762.7 gi|33152652|ref|NP_874005.1| - 3.6e-52 176.4 1.9 5.1e-52 175.9 1.9 1.2 1 0 0 1 1 1 1 ISXO2-like transposase domain Zn_Tnp_IS1595 PF12760.7 gi|33152652|ref|NP_874005.1| - 1.3e-16 60.3 4.2 3e-16 59.1 4.2 1.7 1 0 0 1 1 1 1 Transposase zinc-ribbon domain SRP_TPR_like PF17004.5 gi|33152652|ref|NP_874005.1| - 0.023 14.7 0.1 0.1 12.6 0.1 2.0 1 1 1 2 2 2 0 Putative TPR-like repeat Tmemb_55A PF09788.9 gi|33152652|ref|NP_874005.1| - 0.066 12.3 1.8 0.45 9.6 0.8 2.0 2 0 0 2 2 2 0 Transmembrane protein 55A CpXC PF14353.6 gi|33152652|ref|NP_874005.1| - 0.1 12.7 2.4 10 6.2 0.1 3.4 2 1 1 3 3 3 0 CpXC protein Zn-ribbon_8 PF09723.10 gi|33152652|ref|NP_874005.1| - 0.14 12.3 0.5 15 5.8 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain zf-Sec23_Sec24 PF04810.15 gi|33152652|ref|NP_874005.1| - 0.3 11.2 4.4 0.97 9.5 4.4 1.9 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger zinc_ribbon_4 PF13717.6 gi|33152652|ref|NP_874005.1| - 1.3 9.0 5.2 2.4 8.2 0.5 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Styelin PF17562.2 gi|33152654|ref|NP_874007.1| - 0.13 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 Styelin Na_Ala_symp PF01235.17 gi|33152655|ref|NP_874008.1| - 2.1e-154 514.6 30.7 2.7e-154 514.3 30.7 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family DUF21 PF01595.20 gi|33152655|ref|NP_874008.1| - 0.033 13.9 0.3 0.033 13.9 0.3 3.2 4 1 0 4 4 4 0 Cyclin M transmembrane N-terminal domain NicO PF03824.16 gi|33152656|ref|NP_874009.1| - 8e-41 140.2 18.4 1.2e-40 139.6 18.4 1.3 1 0 0 1 1 1 1 High-affinity nickel-transport protein DUF2839 PF10999.8 gi|33152656|ref|NP_874009.1| - 9 6.7 6.3 40 4.7 0.4 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF2839) DUF1007 PF06226.13 gi|33152657|ref|NP_874010.1| - 8.7e-55 186.0 0.7 9.9e-55 185.8 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1007) Pyr_redox_2 PF07992.14 gi|33152658|ref|NP_874011.1| - 4.4e-62 210.0 3.9 5.4e-62 209.7 3.9 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|33152658|ref|NP_874011.1| - 4.1e-34 117.2 0.0 1.1e-33 115.8 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|33152658|ref|NP_874011.1| - 9.2e-17 61.4 4.6 3.5e-14 53.1 0.5 3.0 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|33152658|ref|NP_874011.1| - 1.2e-09 37.9 6.3 0.00016 21.0 0.0 3.2 2 1 1 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|33152658|ref|NP_874011.1| - 5.8e-08 32.5 1.5 7.6e-08 32.1 0.4 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|33152658|ref|NP_874011.1| - 7.6e-08 31.8 0.6 3.2e-07 29.8 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|33152658|ref|NP_874011.1| - 2.5e-06 26.8 1.1 9.4e-05 21.7 0.3 2.5 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|33152658|ref|NP_874011.1| - 2.5e-05 23.7 2.3 0.23 10.7 0.1 3.3 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|33152658|ref|NP_874011.1| - 8e-05 22.0 0.1 0.00019 20.8 0.1 1.6 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|33152658|ref|NP_874011.1| - 9.4e-05 21.3 2.4 0.0026 16.5 0.1 2.5 2 1 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|33152658|ref|NP_874011.1| - 0.00046 19.5 2.5 0.00047 19.5 0.2 2.0 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|33152658|ref|NP_874011.1| - 0.0012 19.0 0.3 0.0012 19.0 0.3 3.3 4 0 0 4 4 4 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 gi|33152658|ref|NP_874011.1| - 0.017 15.0 2.2 2.5 7.9 0.1 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|33152658|ref|NP_874011.1| - 0.033 13.5 0.1 8.3 5.7 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|33152658|ref|NP_874011.1| - 0.15 11.6 2.6 0.2 11.2 0.5 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-oxoacid_dh PF00198.23 gi|33152659|ref|NP_874012.1| - 1.3e-81 273.4 0.0 2.2e-81 272.7 0.0 1.4 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|33152659|ref|NP_874012.1| - 9.4e-42 140.7 21.2 1.1e-21 76.5 5.8 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme E3_binding PF02817.17 gi|33152659|ref|NP_874012.1| - 2.7e-14 53.2 0.1 8.9e-14 51.6 0.1 2.0 1 0 0 1 1 1 1 e3 binding domain RnfC_N PF13375.6 gi|33152659|ref|NP_874012.1| - 2.6e-07 30.5 15.4 0.0077 16.2 0.4 4.5 1 1 3 4 4 4 4 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 gi|33152659|ref|NP_874012.1| - 6.1e-07 29.2 14.1 0.0057 16.4 0.0 4.9 4 1 1 5 5 5 2 Biotin-lipoyl like HlyD_D23 PF16576.5 gi|33152659|ref|NP_874012.1| - 0.00045 19.5 3.0 0.012 14.9 1.8 2.9 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|33152659|ref|NP_874012.1| - 0.0028 17.5 12.4 0.075 12.9 0.7 3.3 1 1 1 3 3 3 2 Glycine cleavage H-protein PYNP_C PF07831.13 gi|33152659|ref|NP_874012.1| - 0.025 14.2 0.8 16 5.2 0.0 3.5 3 0 0 3 3 3 0 Pyrimidine nucleoside phosphorylase C-terminal domain NQRA PF05896.11 gi|33152659|ref|NP_874012.1| - 0.14 11.6 6.0 3.2 7.1 0.3 2.8 1 1 2 4 4 4 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SCFA_trans PF02667.14 gi|33152659|ref|NP_874012.1| - 0.15 11.0 0.3 0.34 9.9 0.2 1.5 1 1 0 2 2 2 0 Short chain fatty acid transporter DUF2118 PF09891.9 gi|33152659|ref|NP_874012.1| - 0.22 11.5 5.2 1.9 8.4 1.0 2.5 1 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2118) HlyD_3 PF13437.6 gi|33152659|ref|NP_874012.1| - 2.2 9.0 15.1 2 9.1 0.2 3.7 4 1 1 5 5 5 0 HlyD family secretion protein PDH_E1_M PF17831.1 gi|33152660|ref|NP_874013.1| - 1.9e-104 348.2 0.2 3.5e-104 347.4 0.2 1.4 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_N PF00456.21 gi|33152660|ref|NP_874013.1| - 6.5e-15 54.9 0.0 1.7e-11 43.6 0.0 2.3 2 0 0 2 2 2 2 Transketolase, thiamine diphosphate binding domain Transketolase_C PF02780.20 gi|33152660|ref|NP_874013.1| - 0.0038 17.1 0.0 0.015 15.1 0.0 2.1 1 1 1 2 2 2 1 Transketolase, C-terminal domain DHO_dh PF01180.21 gi|33152661|ref|NP_874014.1| - 2.1e-84 283.3 2.0 2.9e-84 282.8 2.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Pribosyltran_N PF13793.6 gi|33152662|ref|NP_874015.1| - 9.3e-51 170.7 0.1 3.2e-50 168.9 0.0 2.0 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 gi|33152662|ref|NP_874015.1| - 1.7e-31 109.7 0.8 3.2e-31 108.8 0.7 1.5 1 1 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 gi|33152662|ref|NP_874015.1| - 1.2e-16 60.6 1.6 1.2e-16 60.6 1.6 2.0 3 0 0 3 3 3 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|33152662|ref|NP_874015.1| - 0.0001 21.8 0.0 0.00018 21.0 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|33152662|ref|NP_874015.1| - 0.029 13.9 0.0 0.051 13.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase GHMP_kinases_C PF08544.13 gi|33152663|ref|NP_874016.1| - 2.7e-08 34.1 0.0 5.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|33152663|ref|NP_874016.1| - 3.3e-07 30.4 1.7 6.2e-07 29.6 1.7 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF4875 PF16175.5 gi|33152663|ref|NP_874016.1| - 0.037 14.2 0.1 0.11 12.6 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4875) LolB PF03550.14 gi|33152664|ref|NP_874017.1| - 2e-38 131.8 0.5 2.5e-38 131.5 0.5 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB DUF3261 PF11659.8 gi|33152664|ref|NP_874017.1| - 0.0032 17.3 0.6 0.0043 16.9 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3261) LPAM_1 PF08139.12 gi|33152664|ref|NP_874017.1| - 3.5 8.3 7.2 0.38 11.4 2.8 1.8 2 0 0 2 2 2 0 Prokaryotic membrane lipoprotein lipid attachment site ABC_membrane PF00664.23 gi|33152665|ref|NP_874018.1| - 4.3e-57 193.9 14.6 5.6e-57 193.5 14.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|33152665|ref|NP_874018.1| - 9.5e-37 126.6 0.3 2.4e-36 125.3 0.1 1.8 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|33152665|ref|NP_874018.1| - 1.7e-09 37.4 4.4 1.4e-07 31.2 4.4 2.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DEAD PF00270.29 gi|33152665|ref|NP_874018.1| - 3.3e-06 27.0 0.3 6.6e-06 26.0 0.3 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_16 PF13191.6 gi|33152665|ref|NP_874018.1| - 6.9e-06 26.6 0.7 1.3e-05 25.7 0.7 1.4 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|33152665|ref|NP_874018.1| - 0.00022 21.1 0.1 0.00058 19.8 0.1 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|33152665|ref|NP_874018.1| - 0.00024 21.4 0.3 0.0015 18.8 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|33152665|ref|NP_874018.1| - 0.0012 18.7 1.0 0.0045 16.7 1.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33152665|ref|NP_874018.1| - 0.0022 17.7 0.1 0.0055 16.4 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain APS_kinase PF01583.20 gi|33152665|ref|NP_874018.1| - 0.0041 17.0 0.0 0.0077 16.1 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_24 PF13479.6 gi|33152665|ref|NP_874018.1| - 0.006 16.3 0.0 0.014 15.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|33152665|ref|NP_874018.1| - 0.012 15.4 0.6 1.6 8.5 0.1 2.8 2 1 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|33152665|ref|NP_874018.1| - 0.014 15.0 1.0 0.054 13.1 1.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|33152665|ref|NP_874018.1| - 0.021 15.4 0.2 0.069 13.7 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|33152665|ref|NP_874018.1| - 0.024 14.4 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|33152665|ref|NP_874018.1| - 0.037 14.3 3.7 10 6.4 0.0 3.7 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|33152665|ref|NP_874018.1| - 0.058 13.5 0.1 0.17 11.9 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|33152665|ref|NP_874018.1| - 0.068 12.4 0.0 0.14 11.4 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 gi|33152665|ref|NP_874018.1| - 0.1 12.1 0.3 0.28 10.7 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|33152665|ref|NP_874018.1| - 0.11 11.6 0.2 0.22 10.6 0.2 1.6 1 1 0 1 1 1 0 NB-ARC domain AAA_5 PF07728.14 gi|33152665|ref|NP_874018.1| - 0.11 12.4 0.0 0.5 10.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|33152665|ref|NP_874018.1| - 0.15 11.7 0.2 0.3 10.7 0.2 1.6 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 gi|33152665|ref|NP_874018.1| - 0.22 11.6 1.6 0.4 10.7 0.2 2.0 2 1 0 2 2 2 0 Helicase HerA, central domain RNase_E_G PF10150.9 gi|33152666|ref|NP_874019.1| - 4.6e-100 334.5 1.6 4.6e-100 334.5 1.6 1.8 3 0 0 3 3 3 1 Ribonuclease E/G family S1 PF00575.23 gi|33152666|ref|NP_874019.1| - 8.9e-07 29.2 0.4 2.3e-06 27.8 0.4 1.7 1 0 0 1 1 1 1 S1 RNA binding domain HARE-HTH PF05066.13 gi|33152666|ref|NP_874019.1| - 0.076 13.4 0.0 1.7 9.1 0.0 3.1 4 0 0 4 4 4 0 HB1, ASXL, restriction endonuclease HTH domain NusA_N PF08529.11 gi|33152666|ref|NP_874019.1| - 0.48 10.8 3.4 3.9 7.8 0.2 3.1 2 1 1 3 3 3 0 NusA N-terminal domain Methyltransf_9 PF08003.11 gi|33152667|ref|NP_874020.1| - 1e-165 550.3 0.1 1.1e-165 550.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_31 PF13847.6 gi|33152667|ref|NP_874020.1| - 2.1e-09 37.4 0.0 3.4e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152667|ref|NP_874020.1| - 4.8e-09 36.3 0.0 8.4e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33152667|ref|NP_874020.1| - 4e-08 33.8 0.0 2.3e-07 31.3 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152667|ref|NP_874020.1| - 3.6e-07 30.8 0.0 8.7e-07 29.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152667|ref|NP_874020.1| - 4.4e-07 30.5 0.0 1.2e-06 29.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|33152667|ref|NP_874020.1| - 9.6e-05 21.8 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 gi|33152667|ref|NP_874020.1| - 0.0062 16.3 0.0 0.01 15.6 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 gi|33152667|ref|NP_874020.1| - 0.094 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|33152667|ref|NP_874020.1| - 0.11 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain MltA PF03562.17 gi|33152670|ref|NP_874023.1| - 4.4e-46 157.5 0.8 1.8e-35 122.7 0.0 2.2 1 1 1 2 2 2 2 MltA specific insert domain 3D PF06725.11 gi|33152670|ref|NP_874023.1| - 1.2e-24 86.3 0.1 2.5e-24 85.3 0.1 1.6 1 0 0 1 1 1 1 3D domain MFS_1 PF07690.16 gi|33152671|ref|NP_874024.1| - 2.8e-21 75.8 45.6 2.8e-21 75.8 45.6 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_Mycoplasma PF07672.13 gi|33152671|ref|NP_874024.1| - 2.6e-14 53.2 13.2 2.9e-11 43.2 7.6 3.3 2 1 2 4 4 4 2 Mycoplasma MFS transporter Phage_holin_3_6 PF07332.11 gi|33152671|ref|NP_874024.1| - 0.01 15.8 0.4 0.01 15.8 0.4 5.3 3 2 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Peripla_BP_3 PF13377.6 gi|33152673|ref|NP_874026.1| - 3.4e-40 138.1 0.0 6.9e-40 137.1 0.0 1.5 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 gi|33152673|ref|NP_874026.1| - 1.7e-34 119.5 0.0 2.3e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 gi|33152673|ref|NP_874026.1| - 5e-19 68.9 0.0 7.1e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 gi|33152673|ref|NP_874026.1| - 2.2e-18 65.7 0.5 5.5e-18 64.5 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_Tnp_ISL3 PF13542.6 gi|33152673|ref|NP_874026.1| - 0.011 15.1 0.8 0.025 14.0 0.2 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 gi|33152673|ref|NP_874026.1| - 0.023 14.7 0.0 0.075 13.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix HTH_38 PF13936.6 gi|33152673|ref|NP_874026.1| - 0.039 13.7 0.0 1.8 8.4 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain LYTB PF02401.18 gi|33152673|ref|NP_874026.1| - 0.047 12.9 0.3 0.065 12.5 0.3 1.3 1 0 0 1 1 1 0 LytB protein HTH_23 PF13384.6 gi|33152673|ref|NP_874026.1| - 0.049 13.4 0.1 0.66 9.8 0.0 2.4 1 1 1 2 2 2 0 Homeodomain-like domain MerR PF00376.23 gi|33152673|ref|NP_874026.1| - 0.09 12.6 0.2 0.18 11.6 0.2 1.5 1 0 0 1 1 1 0 MerR family regulatory protein HTH_24 PF13412.6 gi|33152673|ref|NP_874026.1| - 0.092 12.3 0.2 6.3 6.5 0.0 2.8 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_17 PF12728.7 gi|33152673|ref|NP_874026.1| - 0.14 12.3 0.1 0.4 10.9 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain SNARE_assoc PF09335.11 gi|33152674|ref|NP_874027.1| - 4.3e-25 88.5 1.0 4.3e-25 88.5 1.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein GWT1 PF06423.12 gi|33152674|ref|NP_874027.1| - 1.3 9.1 4.6 9.2 6.4 0.3 2.5 2 1 0 2 2 2 0 GWT1 DNA_gyraseB PF00204.25 gi|33152675|ref|NP_874028.1| - 3.2e-58 196.0 0.0 5.7e-58 195.2 0.0 1.4 1 0 0 1 1 1 1 DNA gyrase B GyrB_insert PF18053.1 gi|33152675|ref|NP_874028.1| - 1.6e-49 168.0 0.1 2.7e-49 167.2 0.1 1.4 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 gi|33152675|ref|NP_874028.1| - 1.6e-30 105.0 0.1 3.5e-30 104.0 0.1 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|33152675|ref|NP_874028.1| - 1e-22 80.7 0.1 3.1e-22 79.2 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|33152675|ref|NP_874028.1| - 8.7e-19 67.7 0.1 2.5e-18 66.2 0.0 1.9 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 gi|33152675|ref|NP_874028.1| - 0.00022 21.1 0.1 0.0013 18.6 0.1 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LptE PF04390.12 gi|33152675|ref|NP_874028.1| - 0.014 16.1 1.1 0.17 12.6 0.0 2.7 2 0 0 2 2 2 0 Lipopolysaccharide-assembly Terminase_2 PF03592.16 gi|33152676|ref|NP_874029.1| - 0.026 15.0 0.3 0.032 14.7 0.3 1.1 1 0 0 1 1 1 0 Terminase small subunit Gal-bind_lectin PF00337.22 gi|33152677|ref|NP_874030.1| - 0.048 13.2 0.2 0.05 13.1 0.2 1.0 1 0 0 1 1 1 0 Galactoside-binding lectin UbiA PF01040.18 gi|33152679|ref|NP_874032.1| - 5.3e-63 212.7 23.3 6.3e-63 212.4 23.3 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF4658 PF15555.6 gi|33152679|ref|NP_874032.1| - 0.13 12.4 1.3 0.4 10.8 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4658) Bunya_G2 PF03563.13 gi|33152679|ref|NP_874032.1| - 6.1 6.0 6.1 0.6 9.3 0.4 2.0 2 0 0 2 2 2 0 Bunyavirus glycoprotein G2 DeoRC PF00455.22 gi|33152680|ref|NP_874033.1| - 8.6e-48 162.3 0.3 1.2e-47 161.8 0.3 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 gi|33152680|ref|NP_874033.1| - 2.3e-23 81.7 0.1 4.5e-23 80.8 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|33152680|ref|NP_874033.1| - 6.5e-07 29.2 0.7 2.1e-06 27.6 0.7 1.9 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 gi|33152680|ref|NP_874033.1| - 6.3e-06 25.8 0.2 1.7e-05 24.4 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Put_DNA-bind_N PF06971.13 gi|33152680|ref|NP_874033.1| - 0.031 14.3 0.1 0.076 13.0 0.1 1.7 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus MarR PF01047.22 gi|33152680|ref|NP_874033.1| - 0.05 13.5 0.2 0.11 12.4 0.2 1.6 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|33152680|ref|NP_874033.1| - 0.054 13.5 0.1 0.14 12.2 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Mga PF08280.11 gi|33152680|ref|NP_874033.1| - 0.056 13.5 0.3 0.15 12.2 0.3 1.7 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_36 PF13730.6 gi|33152680|ref|NP_874033.1| - 0.066 13.2 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|33152680|ref|NP_874033.1| - 0.072 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit Penicillinase_R PF03965.16 gi|33152680|ref|NP_874033.1| - 0.088 13.2 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor AbiEi_4 PF13338.6 gi|33152680|ref|NP_874033.1| - 0.1 12.8 0.0 0.31 11.2 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin MarR_2 PF12802.7 gi|33152680|ref|NP_874033.1| - 0.1 12.5 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 MarR family Phage_rep_O PF04492.13 gi|33152680|ref|NP_874033.1| - 0.19 12.3 0.5 3.7 8.2 0.0 2.5 2 1 1 3 3 3 0 Bacteriophage replication protein O Lyase_1 PF00206.20 gi|33152681|ref|NP_874034.1| - 1.2e-74 251.6 0.0 1.5e-74 251.2 0.0 1.1 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 gi|33152681|ref|NP_874034.1| - 1e-52 177.1 0.0 3e-52 175.6 0.0 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal DUF489 PF04356.12 gi|33152682|ref|NP_874035.1| - 1.6e-69 233.8 1.8 1.9e-69 233.6 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF489) DUF2096 PF09869.9 gi|33152682|ref|NP_874035.1| - 0.032 14.3 0.1 0.045 13.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2096) ABC_tran PF00005.27 gi|33152683|ref|NP_874036.1| - 2.2e-26 93.0 0.0 3.4e-26 92.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 gi|33152683|ref|NP_874036.1| - 2.3e-06 27.5 17.4 7.3e-06 25.8 17.4 1.7 1 1 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 gi|33152683|ref|NP_874036.1| - 0.00022 20.7 0.0 0.013 14.9 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|33152683|ref|NP_874036.1| - 0.0026 18.2 0.1 0.0064 16.9 0.1 1.7 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|33152683|ref|NP_874036.1| - 0.0036 17.2 0.0 0.0076 16.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|33152683|ref|NP_874036.1| - 0.005 17.4 0.2 0.0092 16.5 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|33152683|ref|NP_874036.1| - 0.0065 16.2 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|33152683|ref|NP_874036.1| - 0.0066 15.7 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin NB-ARC PF00931.22 gi|33152683|ref|NP_874036.1| - 0.0073 15.5 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain TsaE PF02367.17 gi|33152683|ref|NP_874036.1| - 0.014 15.4 0.1 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DEAD PF00270.29 gi|33152683|ref|NP_874036.1| - 0.014 15.2 0.2 0.032 14.0 0.2 1.5 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|33152683|ref|NP_874036.1| - 0.015 15.5 0.0 0.042 14.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|33152683|ref|NP_874036.1| - 0.019 15.5 0.0 0.034 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|33152683|ref|NP_874036.1| - 0.032 14.0 0.1 0.091 12.5 0.1 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|33152683|ref|NP_874036.1| - 0.055 13.3 4.2 0.91 9.3 0.2 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 gi|33152683|ref|NP_874036.1| - 0.056 13.5 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|33152683|ref|NP_874036.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|33152683|ref|NP_874036.1| - 0.15 12.2 0.0 0.32 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Kinesin PF00225.23 gi|33152683|ref|NP_874036.1| - 0.17 10.8 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Kinesin motor domain SRPRB PF09439.10 gi|33152683|ref|NP_874036.1| - 0.2 11.1 0.0 0.36 10.3 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit ABC_membrane PF00664.23 gi|33152684|ref|NP_874037.1| - 7.3e-33 114.4 13.5 9.6e-33 114.0 13.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|33152684|ref|NP_874037.1| - 1.1e-28 100.4 0.0 2.2e-28 99.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|33152684|ref|NP_874037.1| - 5.8e-06 25.9 1.3 0.00015 21.3 1.3 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|33152684|ref|NP_874037.1| - 4e-05 23.6 0.1 0.00016 21.7 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|33152684|ref|NP_874037.1| - 0.0008 19.5 0.0 0.002 18.2 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 gi|33152684|ref|NP_874037.1| - 0.00093 19.1 2.9 0.72 9.6 0.3 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|33152684|ref|NP_874037.1| - 0.0049 17.3 2.4 0.0098 16.3 0.4 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|33152684|ref|NP_874037.1| - 0.0053 17.0 0.7 0.059 13.6 0.7 2.5 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|33152684|ref|NP_874037.1| - 0.016 14.9 0.1 0.3 10.8 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein Dynamin_N PF00350.23 gi|33152684|ref|NP_874037.1| - 0.028 14.5 0.2 0.06 13.4 0.2 1.5 1 0 0 1 1 1 0 Dynamin family AAA PF00004.29 gi|33152684|ref|NP_874037.1| - 0.03 14.8 0.1 0.33 11.4 0.0 2.6 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|33152684|ref|NP_874037.1| - 0.046 13.5 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AIG1 PF04548.16 gi|33152684|ref|NP_874037.1| - 0.059 12.7 0.1 0.13 11.6 0.0 1.6 2 0 0 2 2 2 0 AIG1 family SbcCD_C PF13558.6 gi|33152684|ref|NP_874037.1| - 0.069 13.4 0.2 0.5 10.6 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Ribosomal_S9 PF00380.19 gi|33152684|ref|NP_874037.1| - 0.073 13.6 0.0 0.28 11.7 0.0 2.0 2 1 0 2 2 2 0 Ribosomal protein S9/S16 AAA_7 PF12775.7 gi|33152684|ref|NP_874037.1| - 0.14 11.6 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|33152684|ref|NP_874037.1| - 0.15 11.3 0.0 0.29 10.4 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin PIG-P PF08510.12 gi|33152684|ref|NP_874037.1| - 0.35 10.8 1.5 0.63 10.0 0.0 2.2 2 0 0 2 2 2 0 PIG-P TamB PF04357.13 gi|33152686|ref|NP_874039.1| - 6e-65 219.9 18.2 1.7e-61 208.6 1.7 5.8 4 1 0 5 5 5 4 TamB, inner membrane protein subunit of TAM complex AsmA_2 PF13502.6 gi|33152686|ref|NP_874039.1| - 0.00023 20.7 28.9 0.31 10.5 0.2 6.2 4 2 2 6 6 6 3 AsmA-like C-terminal region T2SSN PF01203.19 gi|33152686|ref|NP_874039.1| - 0.0034 17.6 1.9 0.0034 17.6 1.9 5.8 4 1 3 7 7 7 1 Type II secretion system (T2SS), protein N Bac_surface_Ag PF01103.23 gi|33152687|ref|NP_874040.1| - 1.3e-33 116.9 5.3 2.7e-33 115.9 5.3 1.5 1 0 0 1 1 1 1 Surface antigen POTRA_TamA_1 PF17243.2 gi|33152687|ref|NP_874040.1| - 1.1e-15 57.4 1.5 2.9e-15 56.1 1.5 1.7 1 0 0 1 1 1 1 POTRA domain TamA domain 1 POTRA PF07244.15 gi|33152687|ref|NP_874040.1| - 5e-07 30.2 3.3 2.6e-05 24.7 0.1 3.3 2 1 1 3 3 3 1 Surface antigen variable number repeat DUF1027 PF06265.11 gi|33152687|ref|NP_874040.1| - 0.012 15.6 0.3 0.031 14.3 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1027) TetR_C_37 PF18665.1 gi|33152687|ref|NP_874040.1| - 0.051 14.2 1.6 3.1 8.4 0.2 2.6 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Stap_Strp_tox_C PF02876.17 gi|33152687|ref|NP_874040.1| - 0.37 11.1 3.1 4.9 7.5 0.2 2.7 2 0 0 2 2 2 0 Staphylococcal/Streptococcal toxin, beta-grasp domain Peptidase_M23 PF01551.22 gi|33152688|ref|NP_874041.1| - 8e-25 86.9 0.3 8e-25 86.9 0.3 2.3 3 0 0 3 3 3 1 Peptidase family M23 FliJ PF02050.16 gi|33152688|ref|NP_874041.1| - 0.0029 17.8 21.7 0.0029 17.8 21.7 3.1 2 1 1 3 3 3 1 Flagellar FliJ protein Ribosomal_L12 PF00542.19 gi|33152688|ref|NP_874041.1| - 0.16 12.4 6.5 0.37 11.2 4.7 2.6 1 1 1 2 2 2 0 Ribosomal protein L7/L12 C-terminal domain Fez1 PF06818.15 gi|33152688|ref|NP_874041.1| - 1.7 9.1 47.8 4.5 7.7 14.5 2.1 2 0 0 2 2 2 0 Fez1 MqsR_toxin PF15723.5 gi|33152688|ref|NP_874041.1| - 2.1 8.8 8.7 0.2 12.0 2.5 2.4 2 1 0 2 2 2 0 Motility quorum-sensing regulator, toxin of MqsA GPHR_N PF12537.8 gi|33152688|ref|NP_874041.1| - 7.9 6.6 9.8 21 5.3 0.3 3.9 3 1 0 3 3 3 0 The Golgi pH Regulator (GPHR) Family N-terminal His_Phos_1 PF00300.22 gi|33152689|ref|NP_874042.1| - 3e-36 124.9 0.1 6.7e-27 94.4 0.1 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) PRK PF00485.18 gi|33152690|ref|NP_874043.1| - 6.2e-42 143.6 0.2 7.2e-42 143.4 0.2 1.0 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|33152690|ref|NP_874043.1| - 2.4e-06 28.1 0.2 5.3e-06 27.0 0.2 1.6 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|33152690|ref|NP_874043.1| - 0.0021 18.0 0.0 0.16 11.9 0.0 2.2 2 0 0 2 2 2 1 Adenylylsulphate kinase CoaE PF01121.20 gi|33152690|ref|NP_874043.1| - 0.0024 17.5 0.1 0.73 9.5 0.0 2.2 2 0 0 2 2 2 2 Dephospho-CoA kinase AAA_33 PF13671.6 gi|33152690|ref|NP_874043.1| - 0.0046 17.1 0.0 0.0077 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|33152690|ref|NP_874043.1| - 0.013 14.9 0.1 0.035 13.6 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 ABC_tran PF00005.27 gi|33152690|ref|NP_874043.1| - 0.022 15.2 0.0 0.042 14.4 0.0 1.5 1 1 0 1 1 1 0 ABC transporter Glyco_transf_54 PF04666.13 gi|33152690|ref|NP_874043.1| - 0.023 13.6 0.1 0.032 13.1 0.1 1.2 1 0 0 1 1 1 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Zeta_toxin PF06414.12 gi|33152690|ref|NP_874043.1| - 0.047 13.0 0.0 0.12 11.6 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 gi|33152690|ref|NP_874043.1| - 0.065 13.6 0.3 0.16 12.4 0.3 1.7 1 1 0 1 1 1 0 RNA helicase Cytidylate_kin PF02224.18 gi|33152690|ref|NP_874043.1| - 0.12 12.1 0.5 1.5 8.5 0.2 2.2 1 1 1 2 2 2 0 Cytidylate kinase AAA_16 PF13191.6 gi|33152690|ref|NP_874043.1| - 0.17 12.2 0.0 0.33 11.3 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain DCD PF06559.11 gi|33152691|ref|NP_874044.1| - 3.8e-12 45.7 0.0 9.5e-10 37.8 0.0 2.0 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|33152691|ref|NP_874044.1| - 9.3e-08 31.8 0.0 1.3e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 dUTPase PNTB PF02233.16 gi|33152692|ref|NP_874045.1| - 1.2e-196 654.2 20.9 1.3e-196 654.0 20.9 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit TPP_enzyme_M PF00205.22 gi|33152692|ref|NP_874045.1| - 0.011 15.5 1.8 0.16 11.7 0.3 3.0 2 1 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain AlaDh_PNT_C PF01262.21 gi|33152693|ref|NP_874046.1| - 4.7e-74 248.3 1.4 8.8e-74 247.4 1.4 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 gi|33152693|ref|NP_874046.1| - 4.6e-50 169.5 0.7 1.2e-49 168.0 0.1 2.0 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, N-terminal domain PNTB_4TM PF12769.7 gi|33152693|ref|NP_874046.1| - 3e-34 117.3 10.6 3e-34 117.3 6.7 2.6 2 0 0 2 2 2 1 4TM region of pyridine nucleotide transhydrogenase, mitoch 2-Hacid_dh_C PF02826.19 gi|33152693|ref|NP_874046.1| - 0.0003 20.2 0.2 0.13 11.7 0.1 2.8 2 1 1 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 gi|33152693|ref|NP_874046.1| - 0.00031 20.7 0.8 0.012 15.5 0.2 2.8 2 2 0 2 2 2 1 Zinc-binding dehydrogenase Pyr_redox_2 PF07992.14 gi|33152693|ref|NP_874046.1| - 0.035 13.4 0.1 0.053 12.7 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FtsJ PF01728.19 gi|33152693|ref|NP_874046.1| - 0.083 13.0 0.0 6.5 6.8 0.0 2.3 2 0 0 2 2 2 0 FtsJ-like methyltransferase Pyr_redox PF00070.27 gi|33152693|ref|NP_874046.1| - 0.098 13.2 0.4 0.4 11.3 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|33152693|ref|NP_874046.1| - 0.61 8.7 3.3 0.41 9.3 1.6 1.6 2 0 0 2 2 2 0 HI0933-like protein SpoU_methylase PF00588.19 gi|33152694|ref|NP_874047.1| - 3.2e-32 111.6 0.3 4.4e-32 111.2 0.3 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family QueF_N PF14819.6 gi|33152695|ref|NP_874048.1| - 8.2e-46 154.9 0.1 2.8e-45 153.2 0.0 1.8 2 0 0 2 2 2 1 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term QueF PF14489.6 gi|33152695|ref|NP_874048.1| - 4.8e-31 106.7 2.1 7.6e-26 90.1 0.0 2.6 3 0 0 3 3 3 2 QueF-like protein Hydrolase_like PF13242.6 gi|33152696|ref|NP_874049.1| - 3.7e-15 55.7 0.1 5.4e-15 55.2 0.1 1.2 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 gi|33152696|ref|NP_874049.1| - 1.4e-11 44.8 0.2 5.7e-07 29.8 0.1 2.1 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase PNK3P PF08645.11 gi|33152696|ref|NP_874049.1| - 1.9e-09 37.5 0.0 3.3e-09 36.6 0.0 1.4 1 1 0 1 1 1 1 Polynucleotide kinase 3 phosphatase Hydrolase PF00702.26 gi|33152696|ref|NP_874049.1| - 7.5e-09 36.2 0.8 2.4e-07 31.3 0.1 2.8 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|33152696|ref|NP_874049.1| - 3e-06 27.3 0.0 8.8e-06 25.8 0.0 1.7 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|33152696|ref|NP_874049.1| - 0.011 15.4 0.1 2 8.1 0.0 2.2 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|33152696|ref|NP_874049.1| - 0.063 13.7 0.1 0.29 11.5 0.0 2.0 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase AhpC-TSA PF00578.21 gi|33152697|ref|NP_874050.1| - 3.8e-34 117.3 0.0 4.5e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|33152697|ref|NP_874050.1| - 1.8e-21 76.4 0.0 2.1e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|33152697|ref|NP_874050.1| - 3.5e-05 23.7 0.0 5.3e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA_2 PF13911.6 gi|33152697|ref|NP_874050.1| - 0.0027 17.8 0.0 0.0033 17.5 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme Radical_SAM PF04055.21 gi|33152698|ref|NP_874051.1| - 1.4e-15 58.1 0.0 2e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 gi|33152698|ref|NP_874051.1| - 7.2e-08 32.4 0.0 1.8e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 HemN C-terminal domain Fer4_14 PF13394.6 gi|33152698|ref|NP_874051.1| - 0.00075 19.6 0.0 0.0014 18.7 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|33152698|ref|NP_874051.1| - 0.01 16.1 0.0 0.021 15.1 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain HTH_45 PF14947.6 gi|33152698|ref|NP_874051.1| - 0.033 14.2 0.0 0.38 10.8 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix zf-H2C2_5 PF13909.6 gi|33152698|ref|NP_874051.1| - 0.55 10.0 2.3 1.6 8.6 2.3 1.8 1 0 0 1 1 1 0 C2H2-type zinc-finger domain SBP_bac_5 PF00496.22 gi|33152699|ref|NP_874052.1| - 7.7e-73 245.6 1.8 1e-72 245.2 1.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 gi|33152700|ref|NP_874053.1| - 2.7e-35 121.8 8.5 2.7e-35 121.8 8.5 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2298 PF10060.9 gi|33152700|ref|NP_874053.1| - 0.0069 15.2 4.6 0.0083 14.9 4.6 1.3 1 1 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) AOX PF01786.17 gi|33152700|ref|NP_874053.1| - 0.14 11.7 0.1 15 5.1 0.0 2.2 2 0 0 2 2 2 0 Alternative oxidase Oxidored_q2 PF00420.24 gi|33152700|ref|NP_874053.1| - 2.4 7.8 14.2 0.14 11.8 5.3 3.3 3 1 0 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABC_tran PF00005.27 gi|33152701|ref|NP_874054.1| - 1.9e-26 93.2 0.1 3e-26 92.6 0.1 1.3 1 0 0 1 1 1 1 ABC transporter BPD_transp_1 PF00528.22 gi|33152701|ref|NP_874054.1| - 1.7e-18 67.0 14.0 1.7e-18 67.0 14.0 1.9 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component oligo_HPY PF08352.12 gi|33152701|ref|NP_874054.1| - 2.9e-07 30.9 0.0 6.8e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|33152701|ref|NP_874054.1| - 7.2e-05 22.7 0.9 0.0001 22.2 0.1 1.6 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system OppC_N PF12911.7 gi|33152701|ref|NP_874054.1| - 0.0017 18.3 1.7 0.0017 18.3 1.7 3.8 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C SMC_N PF02463.19 gi|33152701|ref|NP_874054.1| - 0.0033 16.9 0.3 0.014 14.9 0.3 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|33152701|ref|NP_874054.1| - 0.062 13.6 0.2 0.21 11.9 0.1 2.0 2 1 0 2 2 2 0 AAA domain HCV_NS4a PF01006.20 gi|33152701|ref|NP_874054.1| - 1.6 8.5 3.7 3.3 7.5 0.1 2.5 1 1 1 2 2 2 0 Hepatitis C virus non-structural protein NS4a ABC_tran PF00005.27 gi|33152702|ref|NP_874055.1| - 4.2e-36 124.5 0.0 6e-36 124.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|33152702|ref|NP_874055.1| - 4.1e-07 29.7 0.0 7.5e-07 28.8 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|33152702|ref|NP_874055.1| - 0.00016 21.6 0.1 0.00032 20.6 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase oligo_HPY PF08352.12 gi|33152702|ref|NP_874055.1| - 0.00038 20.9 0.0 0.00064 20.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|33152702|ref|NP_874055.1| - 0.00046 20.1 1.2 0.093 12.5 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|33152702|ref|NP_874055.1| - 0.0022 17.7 0.1 0.0045 16.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|33152702|ref|NP_874055.1| - 0.0048 17.0 0.0 0.011 15.8 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_ATPase PF09818.9 gi|33152702|ref|NP_874055.1| - 0.0051 15.7 0.1 0.013 14.3 0.0 1.6 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_25 PF13481.6 gi|33152702|ref|NP_874055.1| - 0.0059 16.2 0.1 0.27 10.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|33152702|ref|NP_874055.1| - 0.013 14.8 0.0 0.027 13.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin Mg_chelatase PF01078.21 gi|33152702|ref|NP_874055.1| - 0.02 14.3 0.2 0.3 10.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|33152702|ref|NP_874055.1| - 0.031 14.5 1.7 0.84 9.9 1.7 2.2 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 gi|33152702|ref|NP_874055.1| - 0.051 13.0 1.2 0.69 9.3 0.2 2.2 2 0 0 2 2 2 0 Bacterial TniB protein Sigma54_activat PF00158.26 gi|33152702|ref|NP_874055.1| - 0.064 13.0 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA PF00004.29 gi|33152702|ref|NP_874055.1| - 0.087 13.3 0.0 0.32 11.4 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|33152702|ref|NP_874055.1| - 0.12 12.3 0.3 0.25 11.2 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_16 PF13191.6 gi|33152702|ref|NP_874055.1| - 0.13 12.7 1.0 0.2 12.0 1.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|33152702|ref|NP_874055.1| - 0.15 11.2 0.1 0.34 10.1 0.1 1.6 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 gi|33152702|ref|NP_874055.1| - 0.15 12.4 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase EamA PF00892.20 gi|33152703|ref|NP_874056.1| - 3.8e-09 36.8 34.5 1.4e-06 28.6 12.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family Phage_holin_2_4 PF16082.5 gi|33152703|ref|NP_874056.1| - 1.3 8.9 4.5 1.3 8.8 0.6 2.6 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like DUF4229 PF14012.6 gi|33152703|ref|NP_874056.1| - 6.1 7.0 16.3 4.7 7.4 0.3 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4229) Smr PF01713.21 gi|33152704|ref|NP_874057.1| - 6.5e-17 61.7 0.0 1.2e-16 60.8 0.0 1.5 1 0 0 1 1 1 1 Smr domain NT5C PF06941.12 gi|33152704|ref|NP_874057.1| - 0.087 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AAA_26 PF13500.6 gi|33152705|ref|NP_874058.1| - 5e-26 91.8 0.0 6e-26 91.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain DUF1611 PF07755.11 gi|33152705|ref|NP_874058.1| - 0.0055 16.0 1.6 0.14 11.4 0.3 2.3 2 1 0 2 2 2 2 Domain of unknown function (DUF1611_C) P-loop domain DUF4905 PF16248.5 gi|33152705|ref|NP_874058.1| - 0.047 13.6 0.1 0.12 12.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) DUF4122 PF13498.6 gi|33152705|ref|NP_874058.1| - 0.084 12.6 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) DUF4467 PF14729.6 gi|33152705|ref|NP_874058.1| - 0.092 13.1 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function with cystatin-like fold (DUF4467) Methyltransf_11 PF08241.12 gi|33152706|ref|NP_874059.1| - 2.1e-15 57.2 0.0 5.1e-15 55.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152706|ref|NP_874059.1| - 2.3e-14 53.9 0.0 6.6e-14 52.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152706|ref|NP_874059.1| - 3.8e-14 53.1 0.0 8.4e-14 52.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|33152706|ref|NP_874059.1| - 1.4e-10 41.3 0.0 1.9e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33152706|ref|NP_874059.1| - 2.6e-10 40.3 0.0 4.8e-10 39.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|33152706|ref|NP_874059.1| - 3.7e-09 36.3 0.0 4.1e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 gi|33152706|ref|NP_874059.1| - 3.6e-06 26.7 0.0 5.8e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|33152706|ref|NP_874059.1| - 6.7e-05 22.5 0.0 0.00032 20.3 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase small domain DREV PF05219.12 gi|33152706|ref|NP_874059.1| - 0.0022 17.2 0.0 0.0031 16.6 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_2 PF00891.18 gi|33152706|ref|NP_874059.1| - 0.0073 15.6 0.0 0.0094 15.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_PK PF05891.12 gi|33152706|ref|NP_874059.1| - 0.013 15.0 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase CheR PF01739.18 gi|33152706|ref|NP_874059.1| - 0.027 14.0 0.0 0.39 10.2 0.0 2.2 2 0 0 2 2 2 0 CheR methyltransferase, SAM binding domain DUF938 PF06080.12 gi|33152706|ref|NP_874059.1| - 0.098 12.4 0.0 0.27 11.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF938) DUF452 PF04301.13 gi|33152707|ref|NP_874060.1| - 1.2e-74 250.4 0.1 1.4e-74 250.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF452) Hydrolase_4 PF12146.8 gi|33152707|ref|NP_874060.1| - 0.0057 16.0 0.0 0.0076 15.5 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Aminotran_1_2 PF00155.21 gi|33152708|ref|NP_874061.1| - 4.6e-59 200.4 0.0 5.2e-59 200.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|33152708|ref|NP_874061.1| - 0.0082 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|33152709|ref|NP_874062.1| - 7.7e-127 423.3 0.0 9e-127 423.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III FTCD_N PF07837.12 gi|33152709|ref|NP_874062.1| - 0.00079 19.3 0.0 0.098 12.4 0.0 2.3 2 0 0 2 2 2 2 Formiminotransferase domain, N-terminal subdomain TraQ PF09679.10 gi|33152709|ref|NP_874062.1| - 0.0031 17.4 0.1 2.4 8.2 0.1 2.5 2 0 0 2 2 2 2 Type-F conjugative transfer system pilin chaperone (TraQ) Beta_elim_lyase PF01212.21 gi|33152709|ref|NP_874062.1| - 0.0086 15.4 0.0 0.3 10.3 0.0 2.2 2 1 0 2 2 2 1 Beta-eliminating lyase MTS PF05175.14 gi|33152710|ref|NP_874063.1| - 5.8e-20 71.5 0.0 3.7e-18 65.6 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|33152710|ref|NP_874063.1| - 4.4e-11 42.8 0.0 6.6e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152710|ref|NP_874063.1| - 1.6e-09 38.3 0.0 7.6e-08 33.0 0.0 2.3 1 1 1 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|33152710|ref|NP_874063.1| - 1.2e-08 34.7 0.0 1.9e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 gi|33152710|ref|NP_874063.1| - 1e-05 25.5 0.0 7.2e-05 22.7 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|33152710|ref|NP_874063.1| - 1e-05 25.2 0.0 1.6e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 gi|33152710|ref|NP_874063.1| - 2.8e-05 23.9 0.0 0.0028 17.5 0.0 2.2 2 0 0 2 2 2 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|33152710|ref|NP_874063.1| - 3e-05 23.7 0.0 5.5e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 Conserved hypothetical protein 95 UPF0020 PF01170.18 gi|33152710|ref|NP_874063.1| - 0.00014 21.6 0.9 0.00044 20.0 0.9 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_18 PF12847.7 gi|33152710|ref|NP_874063.1| - 0.00029 20.8 0.1 0.00091 19.2 0.1 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152710|ref|NP_874063.1| - 0.0007 20.3 0.0 0.0047 17.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|33152710|ref|NP_874063.1| - 0.0038 17.0 0.0 0.016 14.9 0.0 1.8 1 1 1 2 2 2 1 Lysine methyltransferase N6_Mtase PF02384.16 gi|33152710|ref|NP_874063.1| - 0.0065 15.8 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase Ubie_methyltran PF01209.18 gi|33152710|ref|NP_874063.1| - 0.0074 15.6 0.0 0.017 14.5 0.0 1.5 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_2 PF00891.18 gi|33152710|ref|NP_874063.1| - 0.037 13.3 0.0 0.058 12.7 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|33152710|ref|NP_874063.1| - 0.054 12.5 0.0 0.087 11.8 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_10 PF05971.12 gi|33152710|ref|NP_874063.1| - 0.11 11.8 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 RNA methyltransferase LNS2 PF08235.13 gi|33152712|ref|NP_874065.1| - 0.00037 20.0 0.0 0.00071 19.1 0.0 1.3 1 1 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) DDE_Tnp_IS1595 PF12762.7 gi|33152713|ref|NP_874066.1| - 2.2e-51 173.9 1.7 3.7e-51 173.1 1.7 1.4 1 0 0 1 1 1 1 ISXO2-like transposase domain Zn_Tnp_IS1595 PF12760.7 gi|33152713|ref|NP_874066.1| - 1.1e-15 57.3 3.4 2.5e-15 56.2 3.4 1.6 1 0 0 1 1 1 1 Transposase zinc-ribbon domain SRP_TPR_like PF17004.5 gi|33152713|ref|NP_874066.1| - 0.081 12.9 0.3 1 9.4 0.2 2.4 1 1 1 2 2 2 0 Putative TPR-like repeat ASFV_p27 PF06556.11 gi|33152713|ref|NP_874066.1| - 0.22 11.6 4.6 1.4 9.0 0.2 2.6 2 1 0 2 2 2 0 IAP-like protein p27 C-terminus ResIII PF04851.15 gi|33152714|ref|NP_874067.1| - 1.7e-19 70.5 2.2 1.7e-19 70.5 2.2 3.3 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|33152714|ref|NP_874067.1| - 3.3e-08 33.5 1.8 4.3e-07 29.9 0.1 2.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|33152714|ref|NP_874067.1| - 0.00061 19.3 0.9 0.017 14.6 0.0 2.6 2 0 0 2 2 2 1 PhoH-like protein DUF2433 PF10360.9 gi|33152714|ref|NP_874067.1| - 0.0068 16.5 2.0 0.063 13.4 0.3 3.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2433) AAA_19 PF13245.6 gi|33152714|ref|NP_874067.1| - 0.057 13.8 0.3 0.17 12.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain HTH_3 PF01381.22 gi|33152715|ref|NP_874068.1| - 1.6e-05 24.9 0.0 7.8e-05 22.7 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|33152715|ref|NP_874068.1| - 0.0019 18.2 0.0 0.0062 16.5 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|33152715|ref|NP_874068.1| - 0.0081 16.6 0.0 0.071 13.6 0.0 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Phage_CI_repr PF07022.13 gi|33152715|ref|NP_874068.1| - 0.082 13.0 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain MerR_1 PF13411.6 gi|33152715|ref|NP_874068.1| - 0.13 12.4 0.0 0.79 9.8 0.0 2.1 2 0 0 2 2 2 0 MerR HTH family regulatory protein MerR PF00376.23 gi|33152715|ref|NP_874068.1| - 0.14 11.9 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Zn_Tnp_IS1595 PF12760.7 gi|33152716|ref|NP_874069.1| - 1.3e-16 60.3 5.3 2.1e-16 59.6 5.3 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain CpXC PF14353.6 gi|33152716|ref|NP_874069.1| - 0.0019 18.2 2.1 0.65 10.1 0.1 2.2 1 1 1 2 2 2 2 CpXC protein Zn-ribbon_8 PF09723.10 gi|33152716|ref|NP_874069.1| - 0.0045 17.1 2.2 1.5 9.0 0.2 2.3 2 0 0 2 2 2 2 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|33152716|ref|NP_874069.1| - 0.0079 16.1 3.9 0.96 9.4 0.3 2.5 2 0 0 2 2 2 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|33152716|ref|NP_874069.1| - 0.017 15.0 3.3 0.032 14.1 3.3 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Rubredoxin PF00301.20 gi|33152716|ref|NP_874069.1| - 0.066 13.2 0.5 4.9 7.3 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin Post_transc_reg PF13797.6 gi|33152716|ref|NP_874069.1| - 0.14 12.0 0.0 0.81 9.6 0.0 2.0 2 0 0 2 2 2 0 Post-transcriptional regulator zf-BED PF02892.15 gi|33152716|ref|NP_874069.1| - 0.16 12.0 7.0 2.6 8.1 7.0 2.4 1 1 0 1 1 1 0 BED zinc finger Zn_ribbon_SprT PF17283.2 gi|33152716|ref|NP_874069.1| - 0.31 11.0 6.9 0.9 9.5 6.9 1.8 1 1 0 1 1 1 0 SprT-like zinc ribbon domain zf-Sec23_Sec24 PF04810.15 gi|33152716|ref|NP_874069.1| - 1.9 8.6 5.5 14 5.8 5.1 2.2 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger zinc_ribbon_2 PF13240.6 gi|33152716|ref|NP_874069.1| - 2.6 7.9 6.4 1.5 8.7 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|33152716|ref|NP_874069.1| - 5.6 6.8 9.2 51 3.7 9.2 2.2 1 1 0 1 1 1 0 Rubredoxin metal binding domain DUF4379 PF14311.6 gi|33152716|ref|NP_874069.1| - 8.4 6.8 10.4 1.5 9.3 2.6 2.5 1 1 1 2 2 2 0 Probable Zinc-ribbon domain DDE_Tnp_IS1595 PF12762.7 gi|33152717|ref|NP_874070.1| - 1.6e-36 125.6 5.2 2.1e-36 125.3 5.2 1.1 1 0 0 1 1 1 1 ISXO2-like transposase domain PRY PF13765.6 gi|33152717|ref|NP_874070.1| - 0.013 15.1 0.7 0.066 12.9 0.1 2.2 2 0 0 2 2 2 0 SPRY-associated domain Forkhead PF00250.18 gi|33152718|ref|NP_874071.1| - 0.00052 20.2 1.1 0.00069 19.8 0.7 1.4 1 1 0 1 1 1 1 Forkhead domain FUR PF01475.19 gi|33152718|ref|NP_874071.1| - 0.045 13.9 1.2 0.073 13.2 0.4 1.7 2 0 0 2 2 2 0 Ferric uptake regulator family Alpha-mann_mid PF09261.11 gi|33152719|ref|NP_874072.1| - 0.0076 16.4 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Vault_4 PF17796.1 gi|33152719|ref|NP_874072.1| - 0.12 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Major Vault Protein repeat domain GreA_GreB_N PF03449.15 gi|33152720|ref|NP_874073.1| - 4.2e-31 106.9 0.6 5.7e-31 106.5 0.6 1.2 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 gi|33152720|ref|NP_874073.1| - 1e-27 95.8 1.3 1.5e-27 95.3 1.3 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term AICARFT_IMPCHas PF01808.18 gi|33152721|ref|NP_874074.1| - 8.7e-119 396.3 7.8 1e-118 396.1 7.8 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|33152721|ref|NP_874074.1| - 7.4e-10 38.9 0.1 6.3e-09 35.9 0.0 2.5 2 0 0 2 2 2 1 MGS-like domain LpxI_C PF06230.11 gi|33152721|ref|NP_874074.1| - 0.056 13.3 0.1 5.2 6.9 0.0 3.0 3 0 0 3 3 3 0 LpxI C-terminal domain LptD PF04453.14 gi|33152722|ref|NP_874075.1| - 9.6e-109 364.1 35.8 4.7e-108 361.9 32.0 2.3 2 0 0 2 2 2 2 LPS transport system D OstA PF03968.14 gi|33152722|ref|NP_874075.1| - 2.5e-26 92.1 1.0 5.4e-26 91.0 1.0 1.6 1 0 0 1 1 1 1 OstA-like protein DUF2489 PF10675.9 gi|33152723|ref|NP_874076.1| - 3.9e-42 143.2 3.7 4.8e-42 143.0 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2489) YihI PF04220.12 gi|33152724|ref|NP_874077.1| - 1.9e-53 180.4 6.1 2.4e-53 180.0 6.1 1.1 1 0 0 1 1 1 1 Der GTPase activator (YihI) Glt_symporter PF03616.14 gi|33152725|ref|NP_874078.1| - 5.5e-142 472.8 20.6 6.6e-142 472.6 20.6 1.1 1 0 0 1 1 1 1 Sodium/glutamate symporter DUF4407 PF14362.6 gi|33152725|ref|NP_874078.1| - 2.4 7.5 4.6 10 5.4 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) UPF0231 PF06062.11 gi|33152726|ref|NP_874079.1| - 4.8e-40 136.6 2.4 5.3e-40 136.5 2.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0231) RuBisCO_small PF00101.20 gi|33152726|ref|NP_874079.1| - 0.01 15.8 0.1 0.017 15.1 0.1 1.5 1 1 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain GlnE PF03710.15 gi|33152727|ref|NP_874080.1| - 7.5e-180 595.5 1.2 2.5e-90 302.3 0.0 2.8 3 1 0 3 3 3 2 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 gi|33152727|ref|NP_874080.1| - 9.4e-57 191.2 12.1 3.4e-48 163.5 7.9 2.6 2 0 0 2 2 2 2 GlnD PII-uridylyltransferase YCII PF03795.14 gi|33152728|ref|NP_874081.1| - 1e-24 86.7 0.0 1.1e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 YCII-related domain DUF1330 PF07045.11 gi|33152728|ref|NP_874081.1| - 5.6e-05 23.4 0.0 7e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) 4HBT PF03061.22 gi|33152729|ref|NP_874082.1| - 3.6e-19 68.9 0.1 5.9e-19 68.2 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily IspA PF04279.15 gi|33152730|ref|NP_874083.1| - 3.6e-57 193.4 23.2 4.1e-57 193.2 23.2 1.0 1 0 0 1 1 1 1 Intracellular septation protein A PIRT PF15099.6 gi|33152730|ref|NP_874083.1| - 0.72 9.4 9.7 0.41 10.2 1.4 3.0 1 1 0 2 2 2 0 Phosphoinositide-interacting protein family MpPF26 PF07666.11 gi|33152731|ref|NP_874084.1| - 6.8 6.8 20.0 0.55 10.4 9.1 2.7 2 2 0 2 2 2 0 M penetrans paralogue family 26 DUF412 PF04217.13 gi|33152733|ref|NP_874086.1| - 8.3e-52 174.8 3.9 9.3e-52 174.7 3.9 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF412 ATP_bind_3 PF01171.20 gi|33152734|ref|NP_874087.1| - 1.7e-15 57.3 0.0 3e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 PP-loop family Sod_Fe_N PF00081.22 gi|33152734|ref|NP_874087.1| - 0.11 13.0 0.1 0.22 12.0 0.1 1.5 1 0 0 1 1 1 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Na_H_antiporter PF03553.14 gi|33152735|ref|NP_874088.1| - 3.8e-68 230.0 20.9 3.8e-68 230.0 20.9 2.3 2 1 0 2 2 2 1 Na+/H+ antiporter family Na_H_antiport_2 PF13726.6 gi|33152735|ref|NP_874088.1| - 1.9e-27 95.2 26.8 4.4e-26 90.8 9.3 3.4 3 0 0 3 3 3 2 Na+-H+ antiporter family CitMHS PF03600.16 gi|33152735|ref|NP_874088.1| - 2.4e-09 36.8 49.4 0.0022 17.3 21.1 3.0 1 1 1 2 2 2 2 Citrate transporter DctM PF06808.12 gi|33152735|ref|NP_874088.1| - 5e-09 35.5 38.5 1.8e-06 27.1 38.5 2.8 1 1 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DcuC PF03606.15 gi|33152735|ref|NP_874088.1| - 0.003 16.1 11.6 0.003 16.1 11.6 2.5 2 1 0 2 2 2 1 C4-dicarboxylate anaerobic carrier SKG6 PF08693.10 gi|33152735|ref|NP_874088.1| - 0.061 12.7 0.1 0.061 12.7 0.1 4.6 4 0 0 4 4 4 0 Transmembrane alpha-helix domain Exo_endo_phos PF03372.23 gi|33152736|ref|NP_874089.1| - 2.5e-24 86.1 0.0 2.9e-24 85.9 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|33152736|ref|NP_874089.1| - 0.002 18.0 0.1 0.72 9.7 0.0 2.4 2 0 0 2 2 2 2 Endonuclease-reverse transcriptase Glyco_transf_9 PF01075.17 gi|33152737|ref|NP_874090.1| - 1.1e-09 38.0 0.0 1.5e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Glyco_transf_25 PF01755.17 gi|33152738|ref|NP_874091.1| - 5.4e-51 173.3 0.8 7.3e-51 172.9 0.8 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Cas_Cas6 PF01881.16 gi|33152738|ref|NP_874091.1| - 0.33 11.5 2.0 0.69 10.5 2.0 1.7 1 1 0 1 1 1 0 CRISPR associated protein Cas6 Ribosomal_L31 PF01197.18 gi|33152739|ref|NP_874092.1| - 6.7e-33 112.7 0.3 7.5e-33 112.6 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L31 Transketolase_N PF00456.21 gi|33152740|ref|NP_874093.1| - 2e-168 559.6 0.0 3.5e-168 558.7 0.1 1.4 2 0 0 2 2 2 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 gi|33152740|ref|NP_874093.1| - 9.6e-47 158.9 0.0 2.1e-46 157.8 0.0 1.6 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|33152740|ref|NP_874093.1| - 3.6e-19 68.9 0.0 6.7e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 gi|33152740|ref|NP_874093.1| - 5.6e-07 29.1 0.0 0.00038 19.8 0.0 2.4 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|33152740|ref|NP_874093.1| - 0.0012 17.9 0.0 0.0022 17.0 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component FadR_C PF07840.12 gi|33152741|ref|NP_874094.1| - 1.7e-62 210.1 0.1 2.2e-62 209.8 0.1 1.1 1 0 0 1 1 1 1 FadR C-terminal domain GntR PF00392.21 gi|33152741|ref|NP_874094.1| - 3.7e-19 68.1 0.0 6.6e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|33152741|ref|NP_874094.1| - 6.7e-05 22.8 0.0 0.00015 21.6 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|33152741|ref|NP_874094.1| - 9.7e-05 22.2 0.0 0.00019 21.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|33152741|ref|NP_874094.1| - 0.0009 18.8 0.1 0.0019 17.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|33152741|ref|NP_874094.1| - 0.0039 17.5 0.1 0.017 15.5 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|33152741|ref|NP_874094.1| - 0.0048 17.1 0.0 0.014 15.6 0.0 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|33152741|ref|NP_874094.1| - 0.0056 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|33152741|ref|NP_874094.1| - 0.0098 15.7 0.0 0.027 14.3 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain PaaX PF07848.12 gi|33152741|ref|NP_874094.1| - 0.011 16.0 0.0 0.054 13.7 0.0 2.0 2 0 0 2 2 2 0 PaaX-like protein LexA_DNA_bind PF01726.16 gi|33152741|ref|NP_874094.1| - 0.012 15.3 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_11 PF08279.12 gi|33152741|ref|NP_874094.1| - 0.016 15.1 0.1 0.042 13.8 0.1 1.6 1 0 0 1 1 1 0 HTH domain Penicillinase_R PF03965.16 gi|33152741|ref|NP_874094.1| - 0.033 14.5 0.0 0.7 10.3 0.0 2.2 2 0 0 2 2 2 0 Penicillinase repressor TFIIE_alpha PF02002.17 gi|33152741|ref|NP_874094.1| - 0.061 13.2 0.0 1.2 9.0 0.0 2.4 2 0 0 2 2 2 0 TFIIE alpha subunit SMC_Nse1 PF07574.13 gi|33152741|ref|NP_874094.1| - 0.11 12.4 0.2 8.3 6.2 0.0 2.2 2 0 0 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex HTH_28 PF13518.6 gi|33152741|ref|NP_874094.1| - 0.14 12.3 0.1 0.31 11.2 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|33152741|ref|NP_874094.1| - 0.14 12.0 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain NhaB PF06450.12 gi|33152742|ref|NP_874095.1| - 2.6e-264 877.8 28.9 3e-264 877.6 28.9 1.0 1 0 0 1 1 1 1 Bacterial Na+/H+ antiporter B (NhaB) CitMHS PF03600.16 gi|33152742|ref|NP_874095.1| - 3.6e-06 26.4 42.3 0.0053 16.0 2.6 3.2 2 1 1 3 3 3 3 Citrate transporter DsbB PF02600.16 gi|33152743|ref|NP_874096.1| - 3.2e-41 141.2 9.3 3.7e-41 141.0 9.3 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB DPM3 PF08285.11 gi|33152743|ref|NP_874096.1| - 0.09 13.0 0.1 0.09 13.0 0.1 2.3 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Ribonuc_red_lgC PF02867.15 gi|33152745|ref|NP_874098.1| - 3.8e-122 408.5 0.0 3.8e-120 401.9 0.0 2.3 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain ATP-cone PF03477.16 gi|33152745|ref|NP_874098.1| - 1.7e-18 66.9 0.1 4.7e-18 65.5 0.1 1.8 1 0 0 1 1 1 1 ATP cone domain Ribonuc_red_lgN PF00317.21 gi|33152745|ref|NP_874098.1| - 2.6e-12 46.5 0.1 5.7e-12 45.5 0.1 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Ribonuc_red_sm PF00268.21 gi|33152746|ref|NP_874099.1| - 2.6e-46 158.3 2.4 3.5e-46 157.9 2.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain ParA PF10609.9 gi|33152748|ref|NP_874101.1| - 8.7e-102 339.8 0.3 1.1e-101 339.4 0.3 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|33152748|ref|NP_874101.1| - 4.6e-13 49.4 0.0 8.9e-13 48.4 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|33152748|ref|NP_874101.1| - 2.2e-11 44.0 0.3 2.1e-09 37.5 0.1 2.4 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 gi|33152748|ref|NP_874101.1| - 8.4e-09 35.3 0.2 0.00011 21.8 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 gi|33152748|ref|NP_874101.1| - 1e-08 34.8 0.0 1.6e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|33152748|ref|NP_874101.1| - 6.9e-05 22.2 1.4 0.00043 19.6 0.3 2.6 2 1 1 3 3 3 1 Anion-transporting ATPase VirC1 PF07015.11 gi|33152748|ref|NP_874101.1| - 0.0039 16.5 0.0 0.0069 15.7 0.0 1.3 1 0 0 1 1 1 1 VirC1 protein AAA_26 PF13500.6 gi|33152748|ref|NP_874101.1| - 0.0063 16.4 3.5 1.4 8.7 0.3 2.9 3 0 0 3 3 3 2 AAA domain MeaB PF03308.16 gi|33152748|ref|NP_874101.1| - 0.0093 15.0 0.2 0.016 14.2 0.2 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|33152748|ref|NP_874101.1| - 0.014 15.0 0.1 0.027 14.1 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain FTHFS PF01268.19 gi|33152748|ref|NP_874101.1| - 0.036 12.3 0.1 0.051 11.8 0.1 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase Zeta_toxin PF06414.12 gi|33152748|ref|NP_874101.1| - 0.065 12.5 0.0 0.098 11.9 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Sensor PF13796.6 gi|33152748|ref|NP_874101.1| - 0.092 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Putative sensor CLP1_P PF16575.5 gi|33152748|ref|NP_874101.1| - 0.094 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 gi|33152748|ref|NP_874101.1| - 0.14 11.7 0.1 0.27 10.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|33152748|ref|NP_874101.1| - 0.16 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|33152748|ref|NP_874101.1| - 0.24 10.8 4.1 0.2 11.1 0.3 2.5 3 0 0 3 3 3 0 Cellulose biosynthesis protein BcsQ RsgA_GTPase PF03193.16 gi|33152748|ref|NP_874101.1| - 0.26 11.2 2.2 5.3 6.9 0.6 2.2 1 1 1 2 2 2 0 RsgA GTPase SBP_bac_5 PF00496.22 gi|33152749|ref|NP_874102.1| - 1.9e-28 99.6 0.1 1.4e-26 93.4 0.1 2.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MarC PF01914.17 gi|33152750|ref|NP_874103.1| - 1.7e-63 213.7 8.9 1.9e-63 213.6 8.9 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF202 PF02656.15 gi|33152750|ref|NP_874103.1| - 0.034 14.6 1.6 0.034 14.6 1.6 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF202) Mntp PF02659.15 gi|33152750|ref|NP_874103.1| - 0.036 13.8 11.6 0.029 14.1 8.8 2.2 1 1 1 2 2 2 0 Putative manganese efflux pump MscS_TM PF12794.7 gi|33152750|ref|NP_874103.1| - 0.076 11.9 6.5 1 8.2 0.6 2.0 1 1 1 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 PNTB_4TM PF12769.7 gi|33152750|ref|NP_874103.1| - 1.5 9.3 9.3 0.75 10.3 2.8 2.8 2 2 0 2 2 2 0 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF2207 PF09972.9 gi|33152750|ref|NP_874103.1| - 3.1 6.5 8.2 17 4.0 8.2 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) SurA_N_3 PF13624.6 gi|33152751|ref|NP_874104.1| - 2.1e-39 134.9 3.6 2.1e-39 134.9 3.6 2.9 3 1 0 3 3 3 1 SurA N-terminal domain Rotamase_2 PF13145.6 gi|33152751|ref|NP_874104.1| - 3.5e-28 98.9 22.3 1.5e-20 74.3 1.9 4.6 5 0 0 5 5 5 4 PPIC-type PPIASE domain SurA_N_2 PF13623.6 gi|33152751|ref|NP_874104.1| - 1.5e-25 89.8 3.1 1.5e-25 89.8 3.1 2.7 3 0 0 3 3 3 1 SurA N-terminal domain Rotamase_3 PF13616.6 gi|33152751|ref|NP_874104.1| - 1.7e-19 70.5 0.6 1.7e-19 70.5 0.6 2.9 3 0 0 3 3 3 1 PPIC-type PPIASE domain Rotamase PF00639.21 gi|33152751|ref|NP_874104.1| - 3.1e-17 63.3 3.6 3.4e-17 63.2 0.1 2.9 3 0 0 3 3 3 1 PPIC-type PPIASE domain SurA_N PF09312.11 gi|33152751|ref|NP_874104.1| - 0.081 13.0 0.2 0.081 13.0 0.2 3.6 4 1 0 4 4 4 0 SurA N-terminal domain IFN-gamma PF00714.17 gi|33152751|ref|NP_874104.1| - 0.16 11.8 0.1 0.16 11.8 0.1 2.7 3 0 0 3 3 3 0 Interferon gamma COMPASS-Shg1 PF05205.12 gi|33152751|ref|NP_874104.1| - 1.6 9.5 7.5 20 6.0 0.3 3.7 3 1 0 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 Ribosomal_S15 PF00312.22 gi|33152752|ref|NP_874105.1| - 2e-36 124.0 1.8 2.3e-36 123.9 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 HemY_N PF07219.13 gi|33152754|ref|NP_874107.1| - 1.5e-30 105.5 0.1 1.5e-30 105.5 0.1 2.8 3 1 1 4 4 3 1 HemY protein N-terminus TPR_16 PF13432.6 gi|33152754|ref|NP_874107.1| - 0.00015 22.3 0.8 0.87 10.3 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|33152754|ref|NP_874107.1| - 0.0004 20.8 6.9 0.0035 17.8 0.1 4.0 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|33152754|ref|NP_874107.1| - 0.0011 19.0 13.1 1.7 9.0 0.5 5.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|33152754|ref|NP_874107.1| - 0.011 15.5 5.0 9 6.3 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 gi|33152754|ref|NP_874107.1| - 0.02 14.5 1.0 0.13 11.9 0.1 2.7 2 2 1 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_14 PF13428.6 gi|33152754|ref|NP_874107.1| - 0.02 15.6 7.1 6 8.0 0.0 4.8 4 2 2 6 6 4 0 Tetratricopeptide repeat A_deaminase_N PF08451.11 gi|33152754|ref|NP_874107.1| - 0.036 14.4 0.1 7.1 7.0 0.0 3.0 2 0 0 2 2 2 0 Adenosine/AMP deaminase N-terminal Fis1_TPR_C PF14853.6 gi|33152754|ref|NP_874107.1| - 0.052 13.6 3.9 6.6 6.9 0.2 3.4 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat DUF2238 PF09997.9 gi|33152754|ref|NP_874107.1| - 0.058 13.2 0.3 0.14 11.9 0.3 1.7 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) TPR_9 PF13371.6 gi|33152754|ref|NP_874107.1| - 0.093 12.9 0.6 2.1 8.5 0.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 gi|33152754|ref|NP_874107.1| - 0.12 12.5 4.4 7.7 6.8 0.4 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 gi|33152754|ref|NP_874107.1| - 0.93 9.8 8.6 16 5.9 0.2 4.5 3 2 2 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 gi|33152754|ref|NP_874107.1| - 2.2 8.7 10.7 21 5.7 0.1 5.8 6 0 0 6 6 6 0 Tetratricopeptide repeat HemX PF04375.14 gi|33152755|ref|NP_874108.1| - 1.2e-111 373.3 17.7 1.2e-111 373.3 17.7 1.8 2 0 0 2 2 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase TssO PF17561.2 gi|33152755|ref|NP_874108.1| - 7.8e-05 22.8 8.7 0.018 15.2 0.6 3.7 2 1 0 3 3 3 2 Type VI secretion system, TssO DUF1189 PF06691.11 gi|33152755|ref|NP_874108.1| - 0.00079 19.1 0.4 0.0018 17.9 0.4 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) GAS PF13851.6 gi|33152755|ref|NP_874108.1| - 0.0018 17.7 3.6 0.0018 17.7 3.6 2.6 2 0 0 2 2 1 1 Growth-arrest specific micro-tubule binding BLOC1_2 PF10046.9 gi|33152755|ref|NP_874108.1| - 0.037 14.3 10.4 0.17 12.2 2.3 4.1 3 1 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Snapin_Pallidin PF14712.6 gi|33152755|ref|NP_874108.1| - 0.26 11.7 8.8 0.38 11.2 1.9 3.4 3 1 1 4 4 4 0 Snapin/Pallidin XhlA PF10779.9 gi|33152755|ref|NP_874108.1| - 0.28 11.4 6.5 2.1 8.6 0.4 3.9 4 0 0 4 4 4 0 Haemolysin XhlA DUF4140 PF13600.6 gi|33152755|ref|NP_874108.1| - 0.37 11.2 4.6 0.43 11.0 2.0 2.5 1 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Glutaredoxin2_C PF04399.13 gi|33152755|ref|NP_874108.1| - 2.7 7.8 10.2 0.054 13.3 1.1 3.0 4 1 1 5 5 5 0 Glutaredoxin 2, C terminal domain DUF4366 PF14283.6 gi|33152755|ref|NP_874108.1| - 3 7.9 9.1 0.098 12.7 1.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4366) THOC7 PF05615.13 gi|33152755|ref|NP_874108.1| - 3.1 8.1 12.2 0.052 13.8 1.4 3.2 3 0 0 3 3 3 0 Tho complex subunit 7 ZapB PF06005.12 gi|33152755|ref|NP_874108.1| - 5.9 7.4 15.3 13 6.4 6.9 3.7 3 1 0 3 3 3 0 Cell division protein ZapB HEM4 PF02602.15 gi|33152756|ref|NP_874109.1| - 3.3e-13 49.5 0.1 4e-13 49.3 0.1 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD ThiF PF00899.21 gi|33152757|ref|NP_874110.1| - 5.9e-35 120.8 0.1 6.7e-35 120.6 0.1 1.1 1 0 0 1 1 1 1 ThiF family NAD_binding_7 PF13241.6 gi|33152757|ref|NP_874110.1| - 0.0018 18.7 0.1 0.0038 17.7 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|33152757|ref|NP_874110.1| - 0.004 16.8 2.2 0.006 16.2 2.2 1.4 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Cons_hypoth95 PF03602.15 gi|33152757|ref|NP_874110.1| - 0.0044 16.7 0.0 0.0069 16.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Sacchrp_dh_NADP PF03435.18 gi|33152757|ref|NP_874110.1| - 0.02 15.2 1.9 0.14 12.4 1.9 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|33152757|ref|NP_874110.1| - 0.11 12.3 0.1 0.18 11.7 0.1 1.4 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABC_tran PF00005.27 gi|33152758|ref|NP_874111.1| - 5.7e-53 179.1 0.7 1.1e-24 87.4 0.0 3.3 3 0 0 3 3 3 2 ABC transporter ABC_tran_CTD PF16326.5 gi|33152758|ref|NP_874111.1| - 1.4e-18 66.9 7.5 1.4e-18 66.9 7.5 3.3 4 0 0 4 4 3 1 ABC transporter C-terminal domain AAA_21 PF13304.6 gi|33152758|ref|NP_874111.1| - 5.4e-15 56.0 14.1 0.003 17.4 0.2 5.0 2 2 2 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 gi|33152758|ref|NP_874111.1| - 1.5e-11 44.2 1.5 1.5e-11 44.2 1.5 2.8 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 gi|33152758|ref|NP_874111.1| - 9.9e-10 39.1 0.2 1.6e-05 25.3 0.1 2.8 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|33152758|ref|NP_874111.1| - 6.9e-08 32.2 8.1 0.0023 17.4 0.4 4.6 4 1 0 4 4 3 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|33152758|ref|NP_874111.1| - 3.3e-07 30.4 0.0 0.014 15.5 0.0 2.9 3 0 0 3 3 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|33152758|ref|NP_874111.1| - 5.1e-07 29.7 2.6 0.017 15.0 0.0 2.9 3 0 0 3 3 2 2 RsgA GTPase AAA_29 PF13555.6 gi|33152758|ref|NP_874111.1| - 5.3e-07 29.3 0.1 0.018 14.7 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RNA_helicase PF00910.22 gi|33152758|ref|NP_874111.1| - 7.1e-07 29.6 0.0 0.031 14.7 0.0 2.8 2 0 0 2 2 2 2 RNA helicase AAA PF00004.29 gi|33152758|ref|NP_874111.1| - 9e-07 29.4 0.0 0.066 13.6 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|33152758|ref|NP_874111.1| - 1.9e-06 28.1 0.1 0.04 14.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 gi|33152758|ref|NP_874111.1| - 3e-06 27.3 0.7 0.051 13.6 0.0 3.4 3 0 0 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Dynamin_N PF00350.23 gi|33152758|ref|NP_874111.1| - 3.6e-06 27.1 0.4 0.16 12.1 0.0 3.3 3 0 0 3 3 3 2 Dynamin family AAA_22 PF13401.6 gi|33152758|ref|NP_874111.1| - 5.7e-06 26.6 7.6 0.01 16.1 0.7 4.1 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|33152758|ref|NP_874111.1| - 1.2e-05 25.2 11.6 0.026 14.2 0.0 4.0 2 2 0 3 3 3 1 AAA ATPase domain AAA_7 PF12775.7 gi|33152758|ref|NP_874111.1| - 1.2e-05 24.9 0.1 0.098 12.2 0.1 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|33152758|ref|NP_874111.1| - 1.5e-05 24.3 0.2 0.1 11.8 0.0 2.6 2 1 0 2 2 2 2 Zeta toxin AAA_25 PF13481.6 gi|33152758|ref|NP_874111.1| - 2.7e-05 23.9 0.0 0.23 11.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|33152758|ref|NP_874111.1| - 3.1e-05 24.5 0.7 0.42 11.2 0.0 3.1 3 0 0 3 3 2 2 AAA domain AAA_28 PF13521.6 gi|33152758|ref|NP_874111.1| - 4.2e-05 23.9 2.3 0.062 13.5 0.7 3.0 2 1 0 2 2 2 2 AAA domain DUF815 PF05673.13 gi|33152758|ref|NP_874111.1| - 5.1e-05 22.6 0.1 0.34 10.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|33152758|ref|NP_874111.1| - 6.7e-05 22.9 3.0 0.1 12.5 0.0 2.9 3 0 0 3 3 2 2 NACHT domain AAA_24 PF13479.6 gi|33152758|ref|NP_874111.1| - 7.4e-05 22.6 0.2 0.41 10.3 0.1 2.9 2 1 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.25 gi|33152758|ref|NP_874111.1| - 9.9e-05 22.1 0.0 0.065 12.9 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_14 PF13173.6 gi|33152758|ref|NP_874111.1| - 0.0001 22.3 0.1 0.68 10.0 0.0 3.5 3 0 0 3 3 2 2 AAA domain AAA_30 PF13604.6 gi|33152758|ref|NP_874111.1| - 0.00012 21.9 0.1 0.32 10.7 0.0 3.2 2 1 0 2 2 2 1 AAA domain PduV-EutP PF10662.9 gi|33152758|ref|NP_874111.1| - 0.00022 21.0 1.0 0.28 10.9 0.2 2.5 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 gi|33152758|ref|NP_874111.1| - 0.00028 21.1 0.4 1.1 9.5 0.0 3.1 3 0 0 3 3 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_5 PF07728.14 gi|33152758|ref|NP_874111.1| - 0.00048 20.1 0.2 1.5 8.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) FeoB_N PF02421.18 gi|33152758|ref|NP_874111.1| - 0.00064 19.3 2.1 1 8.8 0.1 3.6 4 0 0 4 4 3 1 Ferrous iron transport protein B MeaB PF03308.16 gi|33152758|ref|NP_874111.1| - 0.00091 18.3 0.1 0.34 9.8 0.1 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 gi|33152758|ref|NP_874111.1| - 0.00093 18.4 0.4 0.91 8.7 0.0 2.8 3 0 0 3 3 2 2 NB-ARC domain MobB PF03205.14 gi|33152758|ref|NP_874111.1| - 0.0011 18.8 0.8 0.2 11.6 0.2 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|33152758|ref|NP_874111.1| - 0.0049 16.5 2.1 0.65 9.6 0.0 2.9 3 0 0 3 3 2 1 SRP54-type protein, GTPase domain T2SSE PF00437.20 gi|33152758|ref|NP_874111.1| - 0.0052 15.9 0.3 2.7 7.0 0.0 2.8 2 1 0 2 2 2 1 Type II/IV secretion system protein G-alpha PF00503.20 gi|33152758|ref|NP_874111.1| - 0.0075 15.5 1.1 1.4 8.0 0.7 2.6 2 1 0 2 2 2 1 G-protein alpha subunit DLIC PF05783.11 gi|33152758|ref|NP_874111.1| - 0.0075 15.1 0.1 1 8.1 0.1 2.3 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) cobW PF02492.19 gi|33152758|ref|NP_874111.1| - 0.0083 15.7 0.0 4 7.0 0.0 3.3 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.18 gi|33152758|ref|NP_874111.1| - 0.013 14.8 0.0 4.4 6.5 0.0 2.6 2 0 0 2 2 2 0 Septin RuvB_N PF05496.12 gi|33152758|ref|NP_874111.1| - 0.019 14.7 0.1 7.7 6.2 0.0 2.7 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Viral_helicase1 PF01443.18 gi|33152758|ref|NP_874111.1| - 0.022 14.5 0.0 1.1 9.0 0.0 2.7 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Rad17 PF03215.15 gi|33152758|ref|NP_874111.1| - 0.026 14.5 0.0 2.7 7.9 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain IstB_IS21 PF01695.17 gi|33152758|ref|NP_874111.1| - 0.031 14.0 3.2 4 7.1 0.0 3.4 3 1 1 4 4 4 0 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|33152758|ref|NP_874111.1| - 0.048 13.6 3.8 2.5 8.0 0.3 2.9 3 0 0 3 3 2 0 NTPase Mg_chelatase PF01078.21 gi|33152758|ref|NP_874111.1| - 0.058 12.8 0.9 4.2 6.7 0.0 3.0 4 0 0 4 4 3 0 Magnesium chelatase, subunit ChlI SRPRB PF09439.10 gi|33152758|ref|NP_874111.1| - 0.075 12.5 1.0 1 8.7 0.0 3.1 4 0 0 4 4 3 0 Signal recognition particle receptor beta subunit Ploopntkinase3 PF18751.1 gi|33152758|ref|NP_874111.1| - 0.077 12.9 0.1 1.9 8.3 0.0 2.5 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 AAA_23 PF13476.6 gi|33152758|ref|NP_874111.1| - 0.17 12.4 0.0 0.17 12.4 0.0 4.5 4 1 0 5 5 3 0 AAA domain MTS_N PF08468.11 gi|33152758|ref|NP_874111.1| - 0.28 11.2 2.1 6 6.9 0.0 3.2 3 1 0 3 3 3 0 Methyltransferase small domain N-terminal MukB PF04310.12 gi|33152758|ref|NP_874111.1| - 0.4 10.5 4.5 14 5.4 0.0 3.6 3 1 0 3 3 3 0 MukB N-terminal DUF3584 PF12128.8 gi|33152758|ref|NP_874111.1| - 7.2 4.0 22.4 2.5 5.5 0.6 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF3584) DUF87 PF01935.17 gi|33152758|ref|NP_874111.1| - 7.8 6.5 14.4 0.7 9.9 0.1 4.0 4 1 1 5 5 4 0 Helicase HerA, central domain DNA_topoisoIV PF00521.20 gi|33152761|ref|NP_874114.1| - 1.1e-155 518.7 0.2 1.8e-155 518.0 0.2 1.3 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|33152761|ref|NP_874114.1| - 1e-70 233.0 10.1 1.5e-13 50.0 0.1 6.5 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller THF_DHG_CYH PF00763.23 gi|33152761|ref|NP_874114.1| - 0.02 15.2 0.9 0.066 13.5 0.9 1.9 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF2130 PF09903.9 gi|33152761|ref|NP_874114.1| - 0.99 8.6 6.1 0.22 10.7 0.9 2.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2130) Pyr_excise PF03013.14 gi|33152762|ref|NP_874115.1| - 1.8e-44 150.8 0.0 2e-44 150.7 0.0 1.0 1 0 0 1 1 1 1 Pyrimidine dimer DNA glycosylase Methyltransf_23 PF13489.6 gi|33152763|ref|NP_874116.1| - 1.1e-25 90.4 0.0 1.7e-24 86.5 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|33152763|ref|NP_874116.1| - 4.2e-21 75.4 0.0 7.2e-21 74.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|33152763|ref|NP_874116.1| - 3.5e-20 72.3 0.0 4.5e-20 72.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152763|ref|NP_874116.1| - 1.7e-19 70.3 0.1 3.2e-19 69.4 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|33152763|ref|NP_874116.1| - 3.2e-16 59.9 0.0 5.4e-16 59.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|33152763|ref|NP_874116.1| - 2.5e-10 40.1 0.0 3.3e-10 39.7 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|33152763|ref|NP_874116.1| - 4.2e-09 36.2 0.0 6.1e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_9 PF08003.11 gi|33152763|ref|NP_874116.1| - 4.5e-09 35.7 0.0 6.4e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) NodS PF05401.11 gi|33152763|ref|NP_874116.1| - 5.9e-08 32.6 0.0 8.1e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|33152763|ref|NP_874116.1| - 1.9e-07 30.7 0.0 2.4e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|33152763|ref|NP_874116.1| - 4.8e-07 29.5 0.1 1.5e-06 27.8 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|33152763|ref|NP_874116.1| - 0.00034 20.3 0.0 0.0005 19.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW DREV PF05219.12 gi|33152763|ref|NP_874116.1| - 0.00092 18.4 0.0 0.0023 17.1 0.0 1.6 1 1 0 1 1 1 1 DREV methyltransferase Prd1-P2 PF09214.11 gi|33152763|ref|NP_874116.1| - 0.0011 17.8 0.0 0.0014 17.5 0.0 1.0 1 0 0 1 1 1 1 Bacteriophage Prd1, adsorption protein P2 Methyltransf_18 PF12847.7 gi|33152763|ref|NP_874116.1| - 0.0024 17.8 0.1 0.0038 17.2 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|33152763|ref|NP_874116.1| - 0.0038 17.2 0.0 0.0051 16.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|33152763|ref|NP_874116.1| - 0.0083 15.8 0.0 0.017 14.7 0.0 1.5 2 0 0 2 2 2 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 gi|33152763|ref|NP_874116.1| - 0.033 13.6 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB FtsJ PF01728.19 gi|33152763|ref|NP_874116.1| - 0.054 13.6 0.1 0.081 13.0 0.1 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase PCMT PF01135.19 gi|33152763|ref|NP_874116.1| - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) YajC PF02699.15 gi|33152764|ref|NP_874117.1| - 4.5e-26 90.5 0.2 5.1e-26 90.4 0.2 1.1 1 0 0 1 1 1 1 Preprotein translocase subunit MreC PF04085.14 gi|33152764|ref|NP_874117.1| - 0.0042 17.0 0.2 0.0049 16.8 0.2 1.1 1 0 0 1 1 1 1 rod shape-determining protein MreC Orf78 PF06024.12 gi|33152764|ref|NP_874117.1| - 0.062 13.6 0.3 0.11 12.8 0.1 1.5 2 0 0 2 2 2 0 Orf78 (ac78) TetR_C_32 PF09209.11 gi|33152764|ref|NP_874117.1| - 0.12 12.4 0.0 0.23 11.4 0.0 1.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Tmpp129 PF10272.9 gi|33152764|ref|NP_874117.1| - 0.19 11.0 0.0 0.2 10.9 0.0 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor SecD-TM1 PF13721.6 gi|33152765|ref|NP_874118.1| - 4.6e-37 126.6 6.3 4.5e-34 117.0 0.0 3.5 4 0 0 4 4 4 2 SecD export protein N-terminal TM region SecD_SecF PF02355.16 gi|33152765|ref|NP_874118.1| - 3.7e-17 62.3 11.8 3.7e-17 62.3 11.8 1.8 2 0 0 2 2 2 1 Protein export membrane protein MMPL PF03176.15 gi|33152765|ref|NP_874118.1| - 8.5e-10 38.1 11.3 1.8e-09 37.0 11.3 1.5 1 0 0 1 1 1 1 MMPL family Patched PF02460.18 gi|33152765|ref|NP_874118.1| - 5.9e-05 21.4 9.6 8.6e-05 20.8 9.6 1.1 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 gi|33152765|ref|NP_874118.1| - 8.4e-05 20.5 11.2 0.00015 19.6 11.2 1.3 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Sec_GG PF07549.14 gi|33152765|ref|NP_874118.1| - 0.0001 21.7 0.1 0.00025 20.4 0.1 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Sterol-sensing PF12349.8 gi|33152765|ref|NP_874118.1| - 0.0009 19.1 5.1 0.0025 17.7 5.1 1.7 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.16 gi|33152766|ref|NP_874119.1| - 2.7e-66 222.6 12.4 3.6e-66 222.2 12.4 1.1 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|33152766|ref|NP_874119.1| - 2e-12 46.2 0.6 2e-12 46.2 0.6 2.4 3 0 0 3 3 3 1 SecD/SecF GG Motif Zeta_toxin PF06414.12 gi|33152766|ref|NP_874119.1| - 0.12 11.6 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Ferritin PF00210.24 gi|33152767|ref|NP_874120.1| - 5.1e-39 133.4 1.9 6.1e-39 133.2 1.9 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|33152767|ref|NP_874120.1| - 0.03 14.7 3.7 0.18 12.2 0.2 2.2 1 1 1 2 2 2 0 Rubrerythrin Peptidase_M1_N PF17900.1 gi|33152767|ref|NP_874120.1| - 0.031 14.5 0.0 0.051 13.7 0.0 1.3 1 0 0 1 1 1 0 Peptidase M1 N-terminal domain Mad3_BUB1_I_2 PF17014.5 gi|33152767|ref|NP_874120.1| - 0.033 14.3 0.0 0.068 13.3 0.0 1.6 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Ferritin PF00210.24 gi|33152768|ref|NP_874121.1| - 1.6e-37 128.6 7.0 1.8e-37 128.4 7.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|33152768|ref|NP_874121.1| - 0.00099 19.5 4.8 0.0014 19.0 4.8 1.3 1 0 0 1 1 1 1 Rubrerythrin OSK PF17182.4 gi|33152768|ref|NP_874121.1| - 0.018 14.3 0.1 0.034 13.4 0.0 1.5 1 1 1 2 2 2 0 OSK domain CRR7 PF12095.8 gi|33152768|ref|NP_874121.1| - 0.044 14.2 0.3 0.12 12.8 0.1 2.0 1 1 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 Ferritin_2 PF13668.6 gi|33152768|ref|NP_874121.1| - 0.075 13.2 1.6 0.082 13.1 1.2 1.4 1 1 0 1 1 1 0 Ferritin-like domain Xan_ur_permease PF00860.20 gi|33152769|ref|NP_874122.1| - 1.1e-84 284.5 52.6 1.4e-84 284.0 52.6 1.2 1 0 0 1 1 1 1 Permease family RuvB_N PF05496.12 gi|33152770|ref|NP_874123.1| - 4.4e-82 273.5 0.0 6e-82 273.1 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_4 PF17864.1 gi|33152770|ref|NP_874123.1| - 1.5e-32 111.1 1.2 3e-32 110.2 1.2 1.5 1 0 0 1 1 1 1 RuvB AAA lid domain RuvB_C PF05491.13 gi|33152770|ref|NP_874123.1| - 7.3e-26 89.8 0.0 1.4e-25 88.9 0.0 1.5 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain AAA PF00004.29 gi|33152770|ref|NP_874123.1| - 9.7e-20 71.3 0.0 4.1e-19 69.3 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|33152770|ref|NP_874123.1| - 2.1e-08 34.2 0.0 1.3e-05 25.2 0.0 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|33152770|ref|NP_874123.1| - 0.00013 21.3 0.2 0.00068 18.9 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain Mg_chelatase PF01078.21 gi|33152770|ref|NP_874123.1| - 0.00015 21.2 0.2 0.026 13.9 0.0 2.5 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|33152770|ref|NP_874123.1| - 0.00016 22.0 0.1 0.019 15.2 0.0 2.7 1 1 1 2 2 2 1 AAA domain Rad17 PF03215.15 gi|33152770|ref|NP_874123.1| - 0.00017 21.6 0.0 0.00027 20.9 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_3 PF07726.11 gi|33152770|ref|NP_874123.1| - 0.0003 20.7 0.0 0.15 11.9 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|33152770|ref|NP_874123.1| - 0.00034 20.4 0.0 0.8 9.4 0.0 2.3 1 1 0 2 2 2 2 Sigma-54 interaction domain AAA_18 PF13238.6 gi|33152770|ref|NP_874123.1| - 0.0043 17.6 0.0 0.016 15.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|33152770|ref|NP_874123.1| - 0.0058 17.0 0.1 0.18 12.2 0.0 2.7 2 1 0 3 3 3 1 AAA ATPase domain AAA_14 PF13173.6 gi|33152770|ref|NP_874123.1| - 0.0085 16.1 0.0 0.02 14.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|33152770|ref|NP_874123.1| - 0.0093 15.7 0.0 0.043 13.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain Bac_DnaA PF00308.18 gi|33152770|ref|NP_874123.1| - 0.012 15.5 0.0 0.31 10.8 0.0 2.6 3 0 0 3 3 3 0 Bacterial dnaA protein NTPase_1 PF03266.15 gi|33152770|ref|NP_874123.1| - 0.018 15.0 0.3 0.12 12.3 0.0 2.3 2 1 1 3 3 3 0 NTPase TsaE PF02367.17 gi|33152770|ref|NP_874123.1| - 0.026 14.5 0.0 0.047 13.7 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE HTH_15 PF12324.8 gi|33152770|ref|NP_874123.1| - 0.027 14.4 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase T2SSE PF00437.20 gi|33152770|ref|NP_874123.1| - 0.031 13.3 0.0 0.052 12.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|33152770|ref|NP_874123.1| - 0.039 14.3 0.0 0.077 13.4 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 gi|33152770|ref|NP_874123.1| - 0.047 12.9 0.0 0.12 11.5 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain AAA_17 PF13207.6 gi|33152770|ref|NP_874123.1| - 0.048 14.1 0.0 0.13 12.7 0.0 1.8 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|33152770|ref|NP_874123.1| - 0.051 13.3 0.1 0.22 11.2 0.1 2.0 1 1 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activ_2 PF14532.6 gi|33152770|ref|NP_874123.1| - 0.065 13.3 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|33152770|ref|NP_874123.1| - 0.11 12.9 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 ABC transporter MCM PF00493.23 gi|33152770|ref|NP_874123.1| - 0.12 11.5 0.1 6 5.9 0.0 2.6 2 1 0 2 2 2 0 MCM P-loop domain DUF815 PF05673.13 gi|33152770|ref|NP_874123.1| - 0.13 11.4 0.0 7.9 5.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|33152770|ref|NP_874123.1| - 0.13 12.5 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|33152770|ref|NP_874123.1| - 0.13 11.8 0.9 3.6 7.1 0.1 2.6 2 1 1 3 3 3 0 AAA domain TniB PF05621.11 gi|33152770|ref|NP_874123.1| - 0.13 11.6 0.0 2.3 7.6 0.0 2.1 1 1 1 2 2 2 0 Bacterial TniB protein AAA_19 PF13245.6 gi|33152770|ref|NP_874123.1| - 0.16 12.3 0.3 2 8.7 0.1 2.3 1 1 1 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|33152770|ref|NP_874123.1| - 0.17 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase RuvA_N PF01330.21 gi|33152771|ref|NP_874124.1| - 9e-22 77.0 0.2 4.9e-21 74.6 0.1 2.2 2 0 0 2 2 2 1 RuvA N terminal domain HHH_5 PF14520.6 gi|33152771|ref|NP_874124.1| - 2.7e-16 59.9 4.3 4.6e-16 59.2 0.3 2.8 3 0 0 3 3 3 1 Helix-hairpin-helix domain RuvA_C PF07499.13 gi|33152771|ref|NP_874124.1| - 4.9e-14 52.5 1.3 1.1e-13 51.4 1.3 1.6 1 0 0 1 1 1 1 RuvA, C-terminal domain HHH PF00633.23 gi|33152771|ref|NP_874124.1| - 3.7e-08 32.8 0.7 0.00045 20.0 0.1 2.9 2 0 0 2 2 2 2 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|33152771|ref|NP_874124.1| - 5.9e-05 23.2 0.1 0.00061 20.0 0.1 2.4 2 0 0 2 2 2 1 IMS family HHH motif HHH_8 PF14716.6 gi|33152771|ref|NP_874124.1| - 0.00035 20.9 1.4 0.18 12.2 0.0 3.3 2 1 1 3 3 3 1 Helix-hairpin-helix domain Transposase_20 PF02371.16 gi|33152771|ref|NP_874124.1| - 0.00044 20.5 0.0 0.1 12.9 0.0 2.3 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family HHH_2 PF12826.7 gi|33152771|ref|NP_874124.1| - 0.0011 19.0 0.0 5.6 7.1 0.0 3.5 2 1 2 4 4 4 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|33152771|ref|NP_874124.1| - 0.017 15.7 0.3 0.58 10.8 0.1 2.8 1 1 1 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Cdd1 PF11731.8 gi|33152771|ref|NP_874124.1| - 0.025 14.8 0.0 0.47 10.7 0.0 2.6 1 1 1 2 2 2 0 Pathogenicity locus HHH_3 PF12836.7 gi|33152771|ref|NP_874124.1| - 0.042 14.1 0.1 4.2 7.7 0.0 2.5 2 0 0 2 2 2 0 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|33152771|ref|NP_874124.1| - 0.052 13.4 0.0 0.31 10.9 0.0 2.1 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda Ribosomal_S13 PF00416.22 gi|33152771|ref|NP_874124.1| - 0.12 12.8 0.0 4.3 7.7 0.0 2.3 1 1 1 2 2 2 0 Ribosomal protein S13/S18 DUF3173 PF11372.8 gi|33152771|ref|NP_874124.1| - 0.13 12.2 0.2 1.4 8.8 0.0 2.7 3 1 1 4 4 4 0 Domain of unknown function (DUF3173) Pribosyltran PF00156.27 gi|33152772|ref|NP_874125.1| - 3.2e-10 39.7 0.0 4.6e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain RsmJ PF04378.13 gi|33152773|ref|NP_874126.1| - 3.7e-106 353.8 0.0 4.3e-106 353.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Cons_hypoth95 PF03602.15 gi|33152773|ref|NP_874126.1| - 9.6e-06 25.4 0.0 0.00012 21.8 0.0 2.3 3 0 0 3 3 3 1 Conserved hypothetical protein 95 Sigma70_r4_2 PF08281.12 gi|33152773|ref|NP_874126.1| - 0.1 12.3 0.0 8.7 6.1 0.0 2.6 2 0 0 2 2 2 0 Sigma-70, region 4 Calponin PF00402.18 gi|33152773|ref|NP_874126.1| - 0.28 10.9 1.5 9.5 6.0 0.0 2.5 2 0 0 2 2 2 0 Calponin family repeat Amidase_2 PF01510.25 gi|33152774|ref|NP_874127.1| - 6.7e-29 100.9 0.0 9e-29 100.5 0.0 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase PseudoU_synth_2 PF00849.22 gi|33152775|ref|NP_874128.1| - 7.9e-25 87.8 0.0 1.1e-24 87.4 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase RapA_C PF12137.8 gi|33152776|ref|NP_874129.1| - 3e-150 500.2 4.7 5e-150 499.5 4.7 1.3 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal Tudor_1_RapA PF18339.1 gi|33152776|ref|NP_874129.1| - 2e-24 85.3 0.1 4.7e-24 84.1 0.1 1.7 1 0 0 1 1 1 1 RapA N-terminal Tudor like domain 1 Tudor_RapA PF18337.1 gi|33152776|ref|NP_874129.1| - 6e-24 84.0 0.0 1.6e-23 82.7 0.0 1.8 1 0 0 1 1 1 1 RapA N-terminal Tudor like domain SNF2_N PF00176.23 gi|33152776|ref|NP_874129.1| - 4.7e-16 58.4 0.0 1e-15 57.3 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 gi|33152776|ref|NP_874129.1| - 3e-15 56.5 0.1 9.6e-15 54.9 0.1 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|33152776|ref|NP_874129.1| - 6e-13 49.2 2.8 6.5e-12 45.8 0.0 3.1 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|33152776|ref|NP_874129.1| - 6e-05 22.9 3.0 7.1e-05 22.6 0.0 2.5 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|33152776|ref|NP_874129.1| - 0.041 14.2 1.5 0.15 12.3 0.0 2.8 2 1 0 2 2 2 0 AAA domain Helicase_RecD PF05127.14 gi|33152776|ref|NP_874129.1| - 0.058 13.2 0.6 0.33 10.8 0.0 2.4 2 0 0 2 2 2 0 Helicase Flavi_DEAD PF07652.14 gi|33152776|ref|NP_874129.1| - 0.083 12.9 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 Flavivirus DEAD domain YpjP PF14005.6 gi|33152776|ref|NP_874129.1| - 0.084 12.9 0.1 0.084 12.9 0.1 2.3 2 0 0 2 2 2 0 YpjP-like protein DUF4358 PF14270.6 gi|33152776|ref|NP_874129.1| - 0.34 11.2 3.1 0.79 10.0 3.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) DUF4164 PF13747.6 gi|33152776|ref|NP_874129.1| - 1.4 9.2 8.3 0.78 10.1 0.1 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) tRNA_U5-meth_tr PF05958.11 gi|33152777|ref|NP_874130.1| - 3e-27 95.5 2.0 4.5e-26 91.7 2.0 2.1 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 gi|33152777|ref|NP_874130.1| - 9.8e-12 44.9 0.0 2.9e-11 43.4 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152777|ref|NP_874130.1| - 3.3e-07 30.9 0.0 1.1e-06 29.2 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|33152777|ref|NP_874130.1| - 3e-06 27.1 0.0 6.9e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.15 gi|33152777|ref|NP_874130.1| - 3.4e-05 23.6 0.0 6.6e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 TRAM PF01938.20 gi|33152777|ref|NP_874130.1| - 6.2e-05 22.9 0.0 0.00015 21.6 0.0 1.6 1 0 0 1 1 1 1 TRAM domain Methyltransf_11 PF08241.12 gi|33152777|ref|NP_874130.1| - 9.7e-05 22.9 0.0 0.00043 20.9 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain RrnaAD PF00398.20 gi|33152777|ref|NP_874130.1| - 0.0008 18.5 0.0 0.0015 17.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|33152777|ref|NP_874130.1| - 0.0014 18.2 0.0 0.0041 16.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 gi|33152777|ref|NP_874130.1| - 0.0017 18.1 0.0 0.0027 17.5 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|33152777|ref|NP_874130.1| - 0.018 14.9 0.0 0.046 13.6 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain DOT1 PF08123.13 gi|33152777|ref|NP_874130.1| - 0.032 13.8 0.0 0.056 13.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_4 PF02390.17 gi|33152777|ref|NP_874130.1| - 0.035 13.6 0.0 0.076 12.5 0.0 1.6 1 0 0 1 1 1 0 Putative methyltransferase Ubie_methyltran PF01209.18 gi|33152777|ref|NP_874130.1| - 0.038 13.3 0.0 0.069 12.5 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 gi|33152777|ref|NP_874130.1| - 0.081 12.5 0.0 0.23 11.0 0.0 1.8 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 gi|33152777|ref|NP_874130.1| - 0.12 12.0 0.1 2.9 7.5 0.1 2.6 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 ThiF PF00899.21 gi|33152778|ref|NP_874131.1| - 2.2e-63 213.9 0.4 2.6e-63 213.6 0.4 1.0 1 0 0 1 1 1 1 ThiF family NAD_binding_7 PF13241.6 gi|33152778|ref|NP_874131.1| - 0.00048 20.5 0.1 0.00084 19.7 0.1 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|33152778|ref|NP_874131.1| - 0.0018 18.3 0.4 0.016 15.3 0.1 2.1 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|33152778|ref|NP_874131.1| - 0.0095 15.3 0.1 0.036 13.4 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|33152778|ref|NP_874131.1| - 0.028 13.6 0.2 0.039 13.2 0.2 1.2 1 0 0 1 1 1 0 FAD binding domain Sacchrp_dh_NADP PF03435.18 gi|33152778|ref|NP_874131.1| - 0.034 14.4 1.1 0.17 12.2 1.1 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|33152778|ref|NP_874131.1| - 0.039 14.1 0.1 0.083 13.0 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus AdoHcyase_NAD PF00670.21 gi|33152778|ref|NP_874131.1| - 0.051 13.6 0.1 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ADH_zinc_N PF00107.26 gi|33152778|ref|NP_874131.1| - 0.073 13.1 1.3 0.75 9.8 1.3 2.2 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF5100 PF17029.5 gi|33152778|ref|NP_874131.1| - 0.09 12.6 0.2 0.22 11.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5100) DAO PF01266.24 gi|33152778|ref|NP_874131.1| - 0.098 12.2 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase KR PF08659.10 gi|33152778|ref|NP_874131.1| - 0.11 12.4 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 KR domain TrkA_N PF02254.18 gi|33152778|ref|NP_874131.1| - 0.14 12.4 0.3 0.3 11.4 0.1 1.6 2 0 0 2 2 2 0 TrkA-N domain MoeA_N PF03453.17 gi|33152779|ref|NP_874132.1| - 9.4e-43 145.7 0.1 1.3e-42 145.2 0.1 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|33152779|ref|NP_874132.1| - 8.9e-29 100.0 0.0 1.9e-28 98.9 0.0 1.6 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|33152779|ref|NP_874132.1| - 6.9e-15 55.0 0.0 3e-14 53.0 0.0 2.1 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) ABC_tran PF00005.27 gi|33152780|ref|NP_874133.1| - 6.8e-49 165.9 12.2 4.7e-24 85.5 0.0 4.3 4 1 0 4 4 4 2 ABC transporter ABC_tran_Xtn PF12848.7 gi|33152780|ref|NP_874133.1| - 2.6e-27 94.7 6.7 2.6e-27 94.7 6.7 3.6 2 1 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 gi|33152780|ref|NP_874133.1| - 4.6e-14 52.9 11.0 0.0015 18.4 0.1 4.3 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33152780|ref|NP_874133.1| - 2.7e-08 33.5 1.4 0.0025 17.3 0.1 4.1 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|33152780|ref|NP_874133.1| - 1.4e-06 28.4 0.2 0.043 13.9 0.1 3.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|33152780|ref|NP_874133.1| - 9.3e-06 25.6 6.8 0.044 13.7 0.1 3.4 3 0 0 3 3 3 2 RsgA GTPase AAA_23 PF13476.6 gi|33152780|ref|NP_874133.1| - 6.1e-05 23.6 20.2 0.37 11.3 0.1 4.3 4 0 0 4 4 4 3 AAA domain AAA PF00004.29 gi|33152780|ref|NP_874133.1| - 0.00012 22.5 1.3 0.55 10.6 0.0 3.9 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|33152780|ref|NP_874133.1| - 0.00035 20.3 2.4 0.23 11.2 0.2 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|33152780|ref|NP_874133.1| - 0.00038 21.0 0.0 1.8 9.1 0.0 3.1 2 0 0 2 2 2 2 AAA domain ABC_tran_CTD PF16326.5 gi|33152780|ref|NP_874133.1| - 0.0021 18.2 13.0 0.0021 18.2 13.0 3.4 3 2 1 4 4 4 1 ABC transporter C-terminal domain RNA_helicase PF00910.22 gi|33152780|ref|NP_874133.1| - 0.0062 16.9 0.4 7.7 7.0 0.0 3.1 3 0 0 3 3 2 0 RNA helicase MeaB PF03308.16 gi|33152780|ref|NP_874133.1| - 0.0093 15.0 8.5 0.44 9.5 0.0 3.3 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_15 PF13175.6 gi|33152780|ref|NP_874133.1| - 0.03 14.0 17.1 0.4 10.4 0.1 4.4 5 0 0 5 5 5 0 AAA ATPase domain AAA_33 PF13671.6 gi|33152780|ref|NP_874133.1| - 0.04 14.1 1.0 32 4.7 0.0 3.8 3 0 0 3 3 3 0 AAA domain KAP_NTPase PF07693.14 gi|33152780|ref|NP_874133.1| - 0.053 12.8 5.5 2.8 7.1 0.1 3.1 2 2 0 3 3 3 0 KAP family P-loop domain GDPD PF03009.17 gi|33152780|ref|NP_874133.1| - 0.069 12.9 2.0 0.21 11.3 0.4 2.1 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family AAA_5 PF07728.14 gi|33152780|ref|NP_874133.1| - 0.071 13.1 3.0 3.9 7.5 0.0 3.1 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|33152780|ref|NP_874133.1| - 0.074 12.7 0.0 4.1 7.0 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 gi|33152780|ref|NP_874133.1| - 0.076 12.5 0.2 2.8 7.4 0.0 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|33152780|ref|NP_874133.1| - 0.13 12.5 2.0 12 6.2 0.0 3.5 3 0 0 3 3 3 0 AAA domain Roc PF08477.13 gi|33152780|ref|NP_874133.1| - 0.18 12.1 0.9 30 4.8 0.1 3.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase SbcCD_C PF13558.6 gi|33152780|ref|NP_874133.1| - 0.25 11.6 1.7 3.4 8.0 0.1 3.3 3 1 0 3 3 2 0 Putative exonuclease SbcCD, C subunit PduV-EutP PF10662.9 gi|33152780|ref|NP_874133.1| - 0.38 10.5 3.2 15 5.3 0.1 2.9 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 gi|33152780|ref|NP_874133.1| - 0.9 9.9 9.0 5.3 7.4 0.4 3.7 2 2 0 2 2 2 0 AAA ATPase domain Exonuc_VII_L PF02601.15 gi|33152780|ref|NP_874133.1| - 2 7.9 17.8 6.1 6.3 0.6 3.1 3 0 0 3 3 3 0 Exonuclease VII, large subunit Zeta_toxin PF06414.12 gi|33152780|ref|NP_874133.1| - 2.3 7.5 10.7 7.3 5.8 0.1 3.9 4 1 1 5 5 5 0 Zeta toxin Dynamin_N PF00350.23 gi|33152780|ref|NP_874133.1| - 8.5 6.4 9.9 16 5.5 0.0 3.9 4 0 0 4 4 4 0 Dynamin family DUF697 PF05128.12 gi|33152781|ref|NP_874134.1| - 1.8e-54 183.8 1.4 2.6e-54 183.3 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF697) TMEM43 PF07787.12 gi|33152781|ref|NP_874134.1| - 3.2 7.1 7.1 0.36 10.2 2.0 1.9 2 0 0 2 2 2 0 Transmembrane protein 43 Dus PF01207.17 gi|33152782|ref|NP_874135.1| - 6.9e-82 275.0 0.0 8.2e-82 274.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) PdxJ PF03740.13 gi|33152782|ref|NP_874135.1| - 0.049 12.7 0.0 0.087 11.9 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ TerB PF05099.13 gi|33152783|ref|NP_874136.1| - 2e-14 53.7 2.4 4.5e-14 52.6 2.4 1.5 1 0 0 1 1 1 1 Tellurite resistance protein TerB DnaJ PF00226.31 gi|33152783|ref|NP_874136.1| - 2.5e-11 43.5 0.3 5.2e-11 42.5 0.3 1.5 1 0 0 1 1 1 1 DnaJ domain RPT PF13446.6 gi|33152783|ref|NP_874136.1| - 0.041 13.8 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 A repeated domain in UCH-protein OmpA PF00691.20 gi|33152784|ref|NP_874137.1| - 3.9e-20 72.0 0.1 7.1e-20 71.2 0.1 1.4 1 0 0 1 1 1 1 OmpA family DUF4995 PF16386.5 gi|33152784|ref|NP_874137.1| - 0.084 12.9 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function LPAM_1 PF08139.12 gi|33152784|ref|NP_874137.1| - 0.51 10.9 2.1 1 10.0 2.1 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site PD40 PF07676.12 gi|33152785|ref|NP_874138.1| - 2.3e-38 129.3 10.1 1.2e-13 50.6 0.5 5.9 6 0 0 6 6 6 4 WD40-like Beta Propeller Repeat TolB_N PF04052.13 gi|33152785|ref|NP_874138.1| - 2.7e-28 98.3 0.5 8.5e-28 96.6 0.5 1.9 1 0 0 1 1 1 1 TolB amino-terminal domain DPPIV_N PF00930.21 gi|33152785|ref|NP_874138.1| - 5.1e-08 32.1 0.0 0.087 11.6 0.0 3.4 1 1 2 3 3 3 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Gmad1 PF10647.9 gi|33152785|ref|NP_874138.1| - 1e-06 28.7 0.0 0.00028 20.7 0.0 2.9 1 1 2 3 3 3 2 Lipoprotein LpqB beta-propeller domain Pectate_lyase22 PF14583.6 gi|33152785|ref|NP_874138.1| - 7.9e-06 24.8 0.0 0.0058 15.3 0.0 2.9 1 1 2 3 3 3 2 Oligogalacturonate lyase Peptidase_S9_N PF02897.15 gi|33152785|ref|NP_874138.1| - 0.0023 16.8 0.0 0.029 13.2 0.0 2.1 1 1 1 2 2 2 1 Prolyl oligopeptidase, N-terminal beta-propeller domain SGL PF08450.12 gi|33152785|ref|NP_874138.1| - 0.04 13.5 0.0 2.5 7.6 0.0 2.7 1 1 1 2 2 2 0 SMP-30/Gluconolactonase/LRE-like region DUF5050 PF16472.5 gi|33152785|ref|NP_874138.1| - 0.1 11.8 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5050) ExbD PF02472.16 gi|33152786|ref|NP_874139.1| - 4.3e-20 72.2 0.7 5e-20 72.0 0.7 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR PIF2 PF04631.12 gi|33152786|ref|NP_874139.1| - 0.045 12.6 0.3 5.3 5.8 0.1 2.1 1 1 1 2 2 2 0 Per os infectivity factor 2 MotA_ExbB PF01618.16 gi|33152787|ref|NP_874140.1| - 3.6e-39 133.4 0.3 5.2e-39 132.9 0.3 1.2 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family 4HBT PF03061.22 gi|33152788|ref|NP_874141.1| - 1e-14 54.6 0.0 1.4e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|33152788|ref|NP_874141.1| - 1.1e-08 35.6 0.1 1.2e-08 35.5 0.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|33152788|ref|NP_874141.1| - 0.0025 17.1 0.0 0.003 16.9 0.0 1.0 1 0 0 1 1 1 1 Acyl-ACP thioesterase Cyd_oper_YbgE PF09600.10 gi|33152789|ref|NP_874142.1| - 9.7e-23 80.3 13.1 1.2e-22 80.1 13.1 1.1 1 0 0 1 1 1 1 Cyd operon protein YbgE (Cyd_oper_YbgE) YbgT_YccB PF08173.11 gi|33152790|ref|NP_874143.1| - 1.7e-11 44.1 1.7 1.8e-11 44.0 1.7 1.0 1 0 0 1 1 1 1 Membrane bound YbgT-like protein Cyt_bd_oxida_II PF02322.15 gi|33152791|ref|NP_874144.1| - 7.3e-108 360.5 36.8 8.6e-108 360.3 36.8 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF1230 PF06799.11 gi|33152791|ref|NP_874144.1| - 1.5 9.0 4.3 6 7.0 0.7 2.6 2 0 0 2 2 2 0 Conserved in the green lineage and diatoms 27 Cyt_bd_oxida_I PF01654.17 gi|33152792|ref|NP_874145.1| - 2.7e-170 566.5 18.3 3.1e-170 566.3 18.3 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF5339 PF17274.2 gi|33152793|ref|NP_874146.1| - 5e-22 78.5 7.5 6.6e-22 78.1 7.5 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5339) Cpn60_TCP1 PF00118.24 gi|33152794|ref|NP_874147.1| - 9.9e-97 324.6 20.9 1.6e-96 323.9 20.9 1.3 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family REF PF05755.12 gi|33152794|ref|NP_874147.1| - 0.04 13.7 0.6 0.11 12.3 0.6 1.8 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) Cpn10 PF00166.21 gi|33152795|ref|NP_874148.1| - 2.1e-28 98.2 0.4 2.3e-28 98.1 0.4 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cupin_3 PF05899.12 gi|33152795|ref|NP_874148.1| - 0.012 15.2 0.4 0.86 9.3 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF861) YajC PF02699.15 gi|33152795|ref|NP_874148.1| - 0.065 13.1 0.4 0.15 12.0 0.1 1.6 2 0 0 2 2 2 0 Preprotein translocase subunit Cupin_2 PF07883.11 gi|33152795|ref|NP_874148.1| - 0.081 12.7 0.2 7.4 6.4 0.1 2.3 1 1 1 2 2 2 0 Cupin domain NUDIX PF00293.28 gi|33152796|ref|NP_874149.1| - 2e-17 63.4 0.3 2.5e-17 63.2 0.3 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|33152796|ref|NP_874149.1| - 6.3e-08 32.6 0.0 7.8e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 gi|33152796|ref|NP_874149.1| - 0.14 11.7 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Nucleotide hydrolase DUF4916 PF16262.5 gi|33152796|ref|NP_874149.1| - 0.16 11.4 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) SecA_DEAD PF07517.14 gi|33152797|ref|NP_874150.1| - 1.7e-127 424.7 4.0 1.7e-127 424.7 4.0 2.0 2 0 0 2 2 2 1 SecA DEAD-like domain SecA_SW PF07516.13 gi|33152797|ref|NP_874150.1| - 2.3e-64 217.1 10.0 2.3e-64 217.1 10.0 3.1 3 0 0 3 3 3 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 gi|33152797|ref|NP_874150.1| - 1.7e-36 125.3 0.4 6.1e-36 123.4 0.4 2.1 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SEC-C PF02810.15 gi|33152797|ref|NP_874150.1| - 1.2e-10 41.1 9.9 1.9e-10 40.4 9.9 1.3 1 0 0 1 1 1 1 SEC-C motif DEAD PF00270.29 gi|33152797|ref|NP_874150.1| - 0.005 16.6 0.3 0.022 14.5 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF2175 PF09943.9 gi|33152797|ref|NP_874150.1| - 0.036 14.3 0.9 0.036 14.3 0.9 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2175) TetR_C_13 PF16925.5 gi|33152797|ref|NP_874150.1| - 0.23 11.4 2.7 6.5 6.7 0.0 3.4 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Helicase_C PF00271.31 gi|33152797|ref|NP_874150.1| - 0.71 10.2 0.0 0.71 10.2 0.0 2.9 3 0 0 3 3 3 0 Helicase conserved C-terminal domain Histone_HNS PF00816.21 gi|33152797|ref|NP_874150.1| - 0.81 10.5 8.9 16 6.4 0.1 4.1 3 0 0 3 3 3 0 H-NS histone family DUF2547 PF10818.8 gi|33152798|ref|NP_874151.1| - 6e-33 113.6 1.6 7.1e-33 113.4 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2547) DUF3611 PF12263.8 gi|33152798|ref|NP_874151.1| - 0.022 14.7 0.1 0.023 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) DciA PF05258.12 gi|33152799|ref|NP_874152.1| - 5e-07 30.0 0.1 5.6e-07 29.9 0.1 1.1 1 0 0 1 1 1 1 Dna[CI] antecedent, DciA LRS4 PF10422.9 gi|33152799|ref|NP_874152.1| - 0.23 11.0 2.4 0.25 10.9 2.4 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 BolA PF01722.18 gi|33152800|ref|NP_874153.1| - 1.8e-26 92.2 0.2 2.2e-26 91.9 0.2 1.1 1 0 0 1 1 1 1 BolA-like protein Dopey_N PF04118.14 gi|33152800|ref|NP_874153.1| - 0.015 14.4 0.0 0.018 14.2 0.0 1.1 1 0 0 1 1 1 0 Dopey, N-terminal Lipoprotein_16 PF03923.13 gi|33152801|ref|NP_874154.1| - 1.8e-49 167.5 8.6 2.1e-49 167.2 8.6 1.0 1 0 0 1 1 1 1 Uncharacterized lipoprotein DUF4136 PF13590.6 gi|33152801|ref|NP_874154.1| - 0.084 13.5 0.1 0.11 13.1 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4136) IL17R_fnIII_D2 PF16578.5 gi|33152801|ref|NP_874154.1| - 0.096 13.2 0.3 0.46 11.0 0.0 2.0 2 0 0 2 2 2 0 Interleukin 17 receptor D Methyltrans_RNA PF04452.14 gi|33152802|ref|NP_874155.1| - 1.5e-74 250.2 1.2 1.7e-74 250.0 1.2 1.0 1 0 0 1 1 1 1 RNA methyltransferase DUF179 PF02622.15 gi|33152803|ref|NP_874156.1| - 1.2e-45 155.3 0.0 1.4e-45 155.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 CxC3 PF18804.1 gi|33152803|ref|NP_874156.1| - 0.0021 17.9 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 CxC3 like cysteine cluster associated with KDZ transposases RuvX PF03652.15 gi|33152804|ref|NP_874157.1| - 1.1e-42 145.7 0.0 1.2e-42 145.5 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase DUF21 PF01595.20 gi|33152806|ref|NP_874159.1| - 1.1e-37 129.4 6.2 1.1e-37 129.4 6.2 1.6 2 0 0 2 2 2 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|33152806|ref|NP_874159.1| - 5e-20 71.3 0.2 4.1e-19 68.4 0.0 2.4 2 1 0 2 2 2 1 Transporter associated domain CBS PF00571.28 gi|33152806|ref|NP_874159.1| - 4.1e-08 33.6 1.2 0.00017 22.0 0.2 3.3 3 0 0 3 3 3 2 CBS domain DUF5605 PF18310.1 gi|33152806|ref|NP_874159.1| - 0.031 14.2 0.3 0.073 13.0 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) Ribosomal_L20 PF00453.18 gi|33152808|ref|NP_874161.1| - 1.4e-48 163.4 9.6 1.6e-48 163.2 9.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L20 SMC_ScpA PF02616.14 gi|33152808|ref|NP_874161.1| - 0.0067 16.4 0.5 0.0097 15.8 0.5 1.2 1 0 0 1 1 1 1 Segregation and condensation protein ScpA Ribosomal_L35p PF01632.19 gi|33152809|ref|NP_874162.1| - 1.4e-21 76.8 9.2 1.4e-21 76.7 9.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L35 IF3_C PF00707.22 gi|33152810|ref|NP_874163.1| - 4e-36 122.9 0.5 8.1e-36 121.9 0.2 1.7 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain IF3_N PF05198.16 gi|33152810|ref|NP_874163.1| - 2.6e-30 104.5 1.5 7.5e-30 103.0 0.2 2.1 2 0 0 2 2 2 1 Translation initiation factor IF-3, N-terminal domain DUF2303 PF10065.9 gi|33152810|ref|NP_874163.1| - 0.042 13.0 0.2 0.065 12.4 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) tRNA-synt_2b PF00587.25 gi|33152811|ref|NP_874164.1| - 1.1e-49 168.9 0.0 2e-49 168.0 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|33152811|ref|NP_874164.1| - 9e-21 73.8 0.6 2.5e-20 72.4 0.6 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 gi|33152811|ref|NP_874164.1| - 1.3e-14 54.0 0.0 2.6e-14 53.0 0.0 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain TGS PF02824.21 gi|33152811|ref|NP_874164.1| - 1.4e-12 47.4 0.3 9.2e-12 44.8 0.0 2.4 3 0 0 3 3 3 1 TGS domain NAD_kinase PF01513.21 gi|33152812|ref|NP_874165.1| - 2.8e-73 246.7 0.0 3.5e-72 243.1 0.0 1.9 1 1 0 1 1 1 1 ATP-NAD kinase TPALS PF18178.1 gi|33152812|ref|NP_874165.1| - 0.024 14.1 0.0 0.031 13.7 0.0 1.1 1 0 0 1 1 1 0 TIR- and PNP-associating SLOG family ApbA PF02558.16 gi|33152812|ref|NP_874165.1| - 0.084 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DAGK_cat PF00781.24 gi|33152812|ref|NP_874165.1| - 0.11 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Maf PF02545.14 gi|33152813|ref|NP_874166.1| - 4.7e-54 182.7 0.1 5.3e-54 182.5 0.1 1.0 1 0 0 1 1 1 1 Maf-like protein ThiI PF02568.14 gi|33152814|ref|NP_874167.1| - 1.3e-72 243.5 0.1 2.2e-72 242.8 0.1 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|33152814|ref|NP_874167.1| - 3e-21 76.0 0.7 3e-21 76.0 0.7 2.0 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|33152814|ref|NP_874167.1| - 0.0016 17.9 0.5 0.24 10.8 0.0 2.9 2 1 0 2 2 2 2 Queuosine biosynthesis protein QueC Rhodanese PF00581.20 gi|33152814|ref|NP_874167.1| - 0.0034 17.9 0.0 0.011 16.2 0.0 1.9 1 0 0 1 1 1 1 Rhodanese-like domain tRNA_Me_trans PF03054.16 gi|33152814|ref|NP_874167.1| - 0.0082 15.0 0.2 0.2 10.4 0.0 2.9 3 0 0 3 3 3 1 tRNA methyl transferase Coilin_N PF15862.5 gi|33152814|ref|NP_874167.1| - 0.053 13.3 0.1 0.14 12.0 0.1 1.7 2 0 0 2 2 2 0 Coilin N-terminus Adenylsucc_synt PF00709.21 gi|33152815|ref|NP_874168.1| - 1.8e-178 593.7 0.0 2.2e-178 593.5 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Band_7 PF01145.25 gi|33152816|ref|NP_874169.1| - 2.3e-34 119.0 0.2 3.5e-34 118.4 0.2 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|33152816|ref|NP_874169.1| - 0.042 13.6 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family Band_7 PF01145.25 gi|33152817|ref|NP_874170.1| - 2.6e-31 109.0 1.5 4.5e-31 108.2 1.5 1.4 1 0 0 1 1 1 1 SPFH domain / Band 7 family HflK_N PF12221.8 gi|33152817|ref|NP_874170.1| - 5.7e-07 29.4 19.9 2.3e-06 27.5 19.9 2.0 1 1 0 1 1 1 1 Bacterial membrane protein N terminal RESP18 PF14948.6 gi|33152817|ref|NP_874170.1| - 0.00019 21.7 0.0 0.00058 20.1 0.0 1.9 1 0 0 1 1 1 1 RESP18 domain TM_PBP2_N PF16296.5 gi|33152817|ref|NP_874170.1| - 0.071 13.2 1.5 0.26 11.4 0.1 2.5 3 0 0 3 3 3 0 N-terminal of TM subunit in PBP-dependent ABC transporters SCAB_CC PF16712.5 gi|33152817|ref|NP_874170.1| - 0.55 10.0 3.1 2.2 8.1 1.1 2.3 2 0 0 2 2 2 0 Coiled-coil regions of plant-specific actin-binding protein Thioredoxin PF00085.20 gi|33152818|ref|NP_874171.1| - 9.3e-34 115.5 0.0 1e-33 115.4 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|33152818|ref|NP_874171.1| - 8.3e-09 35.9 0.0 1.2e-07 32.1 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|33152818|ref|NP_874171.1| - 2.3e-08 34.2 0.0 1.4e-05 25.4 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like AhpC-TSA PF00578.21 gi|33152818|ref|NP_874171.1| - 2.2e-07 30.8 0.0 2.6e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_9 PF14595.6 gi|33152818|ref|NP_874171.1| - 4.9e-06 26.3 0.0 5.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 gi|33152818|ref|NP_874171.1| - 8.4e-06 25.6 0.1 0.0052 16.5 0.1 2.1 1 1 1 2 2 2 2 Redoxin HyaE PF07449.11 gi|33152818|ref|NP_874171.1| - 9.3e-06 25.6 0.0 1.2e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TraF PF13728.6 gi|33152818|ref|NP_874171.1| - 1.2e-05 25.2 0.0 1.6e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 gi|33152818|ref|NP_874171.1| - 4.2e-05 23.7 0.0 5.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 gi|33152818|ref|NP_874171.1| - 0.00026 20.4 0.0 0.00029 20.3 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 gi|33152818|ref|NP_874171.1| - 0.00048 20.1 0.0 0.00061 19.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_6 PF13848.6 gi|33152818|ref|NP_874171.1| - 0.0029 17.5 0.0 0.0041 17.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|33152818|ref|NP_874171.1| - 0.0043 17.2 0.0 0.0065 16.7 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_5 PF13743.6 gi|33152818|ref|NP_874171.1| - 0.0082 15.8 0.2 0.026 14.2 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin DIM1 PF02966.16 gi|33152818|ref|NP_874171.1| - 0.094 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 Xan_ur_permease PF00860.20 gi|33152819|ref|NP_874172.1| - 8.1e-89 298.0 49.8 9.9e-89 297.7 49.8 1.1 1 0 0 1 1 1 1 Permease family DUF3995 PF13160.6 gi|33152819|ref|NP_874172.1| - 0.43 11.0 28.2 0.21 11.9 6.6 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3995) UvrC_HhH_N PF08459.11 gi|33152820|ref|NP_874173.1| - 6.3e-45 152.8 0.0 2.2e-44 151.1 0.0 1.9 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|33152820|ref|NP_874173.1| - 1.2e-12 47.9 0.4 2.8e-12 46.8 0.4 1.7 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|33152820|ref|NP_874173.1| - 7.8e-09 35.0 0.5 1.7e-08 33.9 0.5 1.6 1 0 0 1 1 1 1 UvrB/uvrC motif HHH PF00633.23 gi|33152820|ref|NP_874173.1| - 2e-06 27.3 0.3 0.0022 17.8 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|33152820|ref|NP_874173.1| - 0.00033 20.7 0.0 0.00081 19.4 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif RecO_N PF11967.8 gi|33152820|ref|NP_874173.1| - 0.00036 20.4 0.0 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 Recombination protein O N terminal HHH_5 PF14520.6 gi|33152820|ref|NP_874173.1| - 0.0021 18.7 0.2 0.0047 17.5 0.2 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain CDP-OH_P_transf PF01066.21 gi|33152821|ref|NP_874174.1| - 1e-15 58.3 4.7 1.9e-15 57.4 0.2 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF202 PF02656.15 gi|33152821|ref|NP_874174.1| - 6.3 7.3 7.5 0.69 10.4 1.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF202) Bax1-I PF01027.20 gi|33152822|ref|NP_874175.1| - 6.2e-40 137.2 35.6 7.1e-40 137.1 35.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DsrC PF04358.13 gi|33152823|ref|NP_874176.1| - 5.6e-43 145.8 0.0 6.2e-43 145.7 0.0 1.0 1 0 0 1 1 1 1 DsrC like protein ZnuA PF01297.17 gi|33152824|ref|NP_874177.1| - 6.4e-75 251.9 0.4 7.3e-75 251.7 0.4 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic RnlB_antitoxin PF15933.5 gi|33152824|ref|NP_874177.1| - 0.11 12.8 0.0 0.63 10.4 0.0 2.1 2 0 0 2 2 2 0 Antitoxin to bacterial toxin RNase LS or RnlA ABC_tran PF00005.27 gi|33152825|ref|NP_874178.1| - 2e-30 106.1 0.0 3e-30 105.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33152825|ref|NP_874178.1| - 1.2e-07 31.8 4.7 0.00014 21.8 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33152825|ref|NP_874178.1| - 1.1e-06 28.2 0.4 2.3e-06 27.2 0.4 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|33152825|ref|NP_874178.1| - 0.00044 20.4 0.1 0.0036 17.5 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|33152825|ref|NP_874178.1| - 0.001 18.7 0.1 0.0025 17.5 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|33152825|ref|NP_874178.1| - 0.0036 17.2 0.7 0.0067 16.3 0.2 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_33 PF13671.6 gi|33152825|ref|NP_874178.1| - 0.017 15.3 0.1 0.1 12.7 0.1 2.1 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|33152825|ref|NP_874178.1| - 0.19 11.8 0.3 0.42 10.7 0.3 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|33152825|ref|NP_874178.1| - 0.2 12.2 0.1 0.44 11.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain Pribosyltran PF00156.27 gi|33152826|ref|NP_874179.1| - 5.6e-14 52.0 0.1 6.5e-14 51.7 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|33152826|ref|NP_874179.1| - 0.00044 19.8 0.0 0.00061 19.3 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|33152826|ref|NP_874179.1| - 0.15 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase DNA_pol3_delta2 PF13177.6 gi|33152827|ref|NP_874180.1| - 7.8e-45 152.6 0.0 7.8e-45 152.6 0.0 2.6 3 1 0 3 3 3 1 DNA polymerase III, delta subunit DNA_pol3_tau_5 PF12170.8 gi|33152827|ref|NP_874180.1| - 7.9e-44 149.2 4.5 7.9e-44 149.2 4.5 3.5 3 2 1 4 4 3 1 DNA polymerase III tau subunit V interacting with alpha DNA_pol3_gamma3 PF12169.8 gi|33152827|ref|NP_874180.1| - 5.2e-26 91.3 1.0 5.2e-26 91.3 1.0 2.6 3 0 0 3 3 3 1 DNA polymerase III subunits gamma and tau domain III AAA PF00004.29 gi|33152827|ref|NP_874180.1| - 8.4e-11 42.4 0.0 3.5e-10 40.4 0.0 2.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|33152827|ref|NP_874180.1| - 1.7e-07 31.1 0.1 8.9e-06 25.5 0.0 2.5 1 1 1 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|33152827|ref|NP_874180.1| - 3.8e-05 23.7 0.0 0.00014 21.9 0.0 2.0 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|33152827|ref|NP_874180.1| - 0.0004 20.4 6.6 0.2 11.6 0.0 3.5 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|33152827|ref|NP_874180.1| - 0.00051 20.5 0.2 0.00051 20.5 0.2 3.0 3 1 0 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 gi|33152827|ref|NP_874180.1| - 0.00057 20.2 4.7 0.002 18.4 0.0 3.7 3 1 0 3 3 3 1 AAA domain AAA_14 PF13173.6 gi|33152827|ref|NP_874180.1| - 0.00069 19.7 0.1 0.0089 16.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|33152827|ref|NP_874180.1| - 0.014 14.6 0.1 3.2 6.9 0.0 2.6 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_18 PF13238.6 gi|33152827|ref|NP_874180.1| - 0.08 13.5 0.2 0.26 11.8 0.0 2.1 2 0 0 2 2 1 0 AAA domain XhlA PF10779.9 gi|33152827|ref|NP_874180.1| - 0.9 9.8 4.6 0.22 11.8 0.5 2.2 2 0 0 2 2 2 0 Haemolysin XhlA AAA_7 PF12775.7 gi|33152827|ref|NP_874180.1| - 2.7 7.5 7.8 0.61 9.6 0.1 3.2 3 1 0 3 3 3 0 P-loop containing dynein motor region ABC_tran PF00005.27 gi|33152828|ref|NP_874181.1| - 1.1e-30 107.0 0.6 2.5e-30 105.8 0.0 1.8 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|33152828|ref|NP_874181.1| - 2.2e-12 47.4 2.3 1.7e-08 34.6 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|33152828|ref|NP_874181.1| - 8.6e-05 23.2 0.8 0.0004 21.0 0.5 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|33152828|ref|NP_874181.1| - 0.00044 20.1 8.6 0.046 13.4 0.1 2.9 2 1 1 3 3 3 2 AAA ATPase domain SMC_N PF02463.19 gi|33152828|ref|NP_874181.1| - 0.002 17.6 0.0 0.41 10.0 0.0 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|33152828|ref|NP_874181.1| - 0.0026 17.5 0.0 0.012 15.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|33152828|ref|NP_874181.1| - 0.012 15.3 0.3 0.03 14.0 0.3 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain NIF PF03031.18 gi|33152828|ref|NP_874181.1| - 0.041 13.7 0.1 0.074 12.8 0.1 1.4 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase HEPN PF05168.14 gi|33152828|ref|NP_874181.1| - 0.089 12.9 0.1 0.41 10.8 0.0 2.1 2 0 0 2 2 2 0 HEPN domain RsgA_GTPase PF03193.16 gi|33152828|ref|NP_874181.1| - 0.1 12.5 2.1 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 RsgA GTPase MukB PF04310.12 gi|33152828|ref|NP_874181.1| - 0.16 11.8 2.5 5.1 6.8 0.1 2.3 2 0 0 2 2 2 0 MukB N-terminal AAA_22 PF13401.6 gi|33152828|ref|NP_874181.1| - 0.35 11.2 2.7 12 6.2 0.7 3.1 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|33152828|ref|NP_874181.1| - 0.54 10.7 9.1 4.6 7.7 9.1 2.2 1 1 0 1 1 1 0 AAA domain ABC2_membrane PF01061.24 gi|33152829|ref|NP_874182.1| - 2.5e-36 125.1 24.6 2.5e-36 125.1 24.6 1.9 2 0 0 2 2 2 1 ABC-2 type transporter CcmB PF03379.13 gi|33152829|ref|NP_874182.1| - 1.2e-06 28.2 3.9 1.4e-06 28.0 3.9 1.2 1 0 0 1 1 1 1 CcmB protein ABC2_membrane_3 PF12698.7 gi|33152829|ref|NP_874182.1| - 0.00032 19.9 37.3 0.00042 19.5 37.3 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein SBP_bac_11 PF13531.6 gi|33152830|ref|NP_874183.1| - 1.5e-41 142.7 1.9 1.7e-41 142.5 1.9 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|33152830|ref|NP_874183.1| - 4e-11 43.4 4.4 4.4e-06 26.9 0.7 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein OpuAC PF04069.12 gi|33152830|ref|NP_874183.1| - 0.00036 20.2 1.4 0.00081 19.0 1.4 1.8 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system PBP_like_2 PF12849.7 gi|33152830|ref|NP_874183.1| - 0.0057 16.4 0.2 0.012 15.3 0.1 1.6 2 0 0 2 2 2 1 PBP superfamily domain BPD_transp_1 PF00528.22 gi|33152831|ref|NP_874184.1| - 4.7e-21 75.4 14.3 6.8e-21 74.8 14.3 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component GSG-1 PF07803.11 gi|33152831|ref|NP_874184.1| - 0.41 10.6 0.1 0.41 10.6 0.1 1.8 2 0 0 2 2 2 0 GSG1-like protein ABC_tran PF00005.27 gi|33152833|ref|NP_874186.1| - 5.2e-33 114.5 0.0 1e-32 113.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|33152833|ref|NP_874186.1| - 4.7e-17 62.0 0.0 1.4e-16 60.5 0.0 1.9 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.19 gi|33152833|ref|NP_874186.1| - 3.8e-05 23.2 0.2 0.19 11.2 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|33152833|ref|NP_874186.1| - 4e-05 23.6 3.8 0.093 12.5 0.2 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|33152833|ref|NP_874186.1| - 8.3e-05 22.5 0.6 0.00017 21.6 0.2 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 gi|33152833|ref|NP_874186.1| - 0.00022 21.8 0.0 0.00037 21.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33152833|ref|NP_874186.1| - 0.00045 19.9 0.3 0.00086 19.0 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|33152833|ref|NP_874186.1| - 0.003 17.6 0.0 0.0083 16.2 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|33152833|ref|NP_874186.1| - 0.0082 16.4 0.5 0.94 9.8 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|33152833|ref|NP_874186.1| - 0.033 13.9 0.1 0.071 12.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 gi|33152833|ref|NP_874186.1| - 0.08 12.3 0.4 0.82 9.1 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 gi|33152833|ref|NP_874186.1| - 0.094 13.1 0.2 0.18 12.2 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 gi|33152833|ref|NP_874186.1| - 0.1 12.3 0.1 7.7 6.1 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain ABC_ATPase PF09818.9 gi|33152833|ref|NP_874186.1| - 0.11 11.3 0.8 6.4 5.5 0.0 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Polyketide_cyc PF03364.20 gi|33152834|ref|NP_874187.1| - 6.2e-32 110.5 0.0 7e-32 110.4 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|33152834|ref|NP_874187.1| - 9.9e-06 25.9 0.0 1.2e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Ub-RnfH PF03658.14 gi|33152835|ref|NP_874188.1| - 3.9e-29 100.8 0.1 4.6e-29 100.6 0.1 1.1 1 0 0 1 1 1 1 RnfH family Ubiquitin OEP PF02321.18 gi|33152836|ref|NP_874189.1| - 1.1e-41 142.8 35.3 3.3e-22 79.2 11.6 2.6 3 0 0 3 3 3 2 Outer membrane efflux protein CEP209_CC5 PF16574.5 gi|33152836|ref|NP_874189.1| - 0.011 15.9 0.2 0.032 14.4 0.2 1.8 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 BTAD PF03704.17 gi|33152836|ref|NP_874189.1| - 0.028 14.8 0.0 21 5.5 0.0 3.1 2 1 1 3 3 3 0 Bacterial transcriptional activator domain MIS13 PF08202.11 gi|33152836|ref|NP_874189.1| - 0.055 12.7 0.6 0.15 11.3 0.1 2.1 2 0 0 2 2 2 0 Mis12-Mtw1 protein family Fib_alpha PF08702.10 gi|33152836|ref|NP_874189.1| - 8.5 6.6 12.2 0.2 11.8 1.8 3.0 4 0 0 4 4 4 0 Fibrinogen alpha/beta chain family Guanylate_kin PF00625.21 gi|33152837|ref|NP_874190.1| - 5e-60 202.3 0.0 5.9e-60 202.1 0.0 1.1 1 0 0 1 1 1 1 Guanylate kinase RsgA_GTPase PF03193.16 gi|33152837|ref|NP_874190.1| - 0.00018 21.4 0.4 0.0011 18.9 0.0 2.2 2 1 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|33152837|ref|NP_874190.1| - 0.0002 21.8 0.1 0.00044 20.7 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|33152837|ref|NP_874190.1| - 0.00039 21.0 0.0 0.00061 20.3 0.0 1.5 1 1 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.23 gi|33152837|ref|NP_874190.1| - 0.00048 20.2 0.0 0.00086 19.4 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|33152837|ref|NP_874190.1| - 0.0018 18.4 0.0 0.0042 17.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|33152837|ref|NP_874190.1| - 0.032 14.5 0.1 0.14 12.4 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|33152837|ref|NP_874190.1| - 0.032 14.7 0.5 0.2 12.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|33152837|ref|NP_874190.1| - 0.069 12.4 0.1 0.27 10.5 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_29 PF13555.6 gi|33152837|ref|NP_874190.1| - 0.086 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|33152837|ref|NP_874190.1| - 0.091 13.2 0.0 0.38 11.2 0.0 2.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|33152837|ref|NP_874190.1| - 0.11 12.1 0.1 2.2 7.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain Rubella_E2 PF05749.11 gi|33152837|ref|NP_874190.1| - 0.11 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Rsa3 PF14615.6 gi|33152837|ref|NP_874190.1| - 0.11 12.0 0.0 0.31 10.6 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 Pribosyltran PF00156.27 gi|33152838|ref|NP_874191.1| - 1.1e-12 47.8 0.0 1.4e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Peptidase_M20 PF01546.28 gi|33152839|ref|NP_874192.1| - 8.7e-19 68.0 0.0 1.2e-18 67.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|33152839|ref|NP_874192.1| - 7.5e-11 41.9 0.4 2.2e-10 40.4 0.4 1.8 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|33152839|ref|NP_874192.1| - 0.11 11.5 0.1 8 5.4 0.0 3.0 3 0 0 3 3 3 0 M42 glutamyl aminopeptidase Glyco_tran_WecB PF03808.13 gi|33152840|ref|NP_874193.1| - 4e-51 173.3 0.2 5e-51 173.0 0.2 1.1 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family WzyE PF06899.11 gi|33152841|ref|NP_874194.1| - 3.7e-132 441.4 46.5 4.1e-132 441.3 46.5 1.0 1 0 0 1 1 1 1 WzyE protein, O-antigen assembly polymerase DUF630 PF04783.12 gi|33152841|ref|NP_874194.1| - 0.015 15.5 0.0 0.034 14.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Glyco_transf_56 PF07429.11 gi|33152842|ref|NP_874195.1| - 9.4e-165 548.0 9.8 1.1e-164 547.8 9.8 1.0 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DegT_DnrJ_EryC1 PF01041.17 gi|33152843|ref|NP_874196.1| - 2.8e-86 290.1 0.1 3.3e-86 289.9 0.1 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|33152843|ref|NP_874196.1| - 2.1e-11 43.6 0.3 3.4e-11 42.9 0.3 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|33152843|ref|NP_874196.1| - 5.4e-07 28.9 0.1 7.7e-07 28.4 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|33152843|ref|NP_874196.1| - 0.00034 19.3 0.4 0.00059 18.5 0.4 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 gi|33152843|ref|NP_874196.1| - 0.0036 16.1 0.4 0.052 12.3 0.4 2.4 2 1 0 2 2 2 1 Orn/Lys/Arg decarboxylase, major domain DUF1343 PF07075.11 gi|33152843|ref|NP_874196.1| - 0.053 12.9 0.3 0.13 11.6 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1343) Acetyltransf_1 PF00583.25 gi|33152844|ref|NP_874197.1| - 6.5e-14 52.2 0.0 9.2e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|33152844|ref|NP_874197.1| - 3.1e-09 36.9 0.0 4.5e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|33152844|ref|NP_874197.1| - 3.8e-06 27.2 0.0 7.2e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|33152844|ref|NP_874197.1| - 0.00027 20.8 0.0 0.0005 20.0 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|33152844|ref|NP_874197.1| - 0.14 12.3 0.0 0.65 10.2 0.0 2.0 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase UDPG_MGDP_dh_N PF03721.14 gi|33152845|ref|NP_874198.1| - 5.1e-60 202.3 0.4 1.9e-58 197.1 0.2 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|33152845|ref|NP_874198.1| - 4.3e-27 94.1 0.1 8.7e-27 93.2 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|33152845|ref|NP_874198.1| - 2.8e-17 63.1 0.0 6.5e-16 58.7 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|33152845|ref|NP_874198.1| - 4.3e-07 30.2 0.2 1.2e-06 28.8 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|33152845|ref|NP_874198.1| - 4.3e-05 23.2 0.4 0.00015 21.4 0.4 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|33152845|ref|NP_874198.1| - 0.0001 22.3 0.5 0.065 13.2 0.1 2.6 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 gi|33152845|ref|NP_874198.1| - 0.00012 21.5 0.4 0.019 14.3 0.1 2.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|33152845|ref|NP_874198.1| - 0.00034 20.6 0.4 0.00068 19.6 0.4 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|33152845|ref|NP_874198.1| - 0.01 15.1 0.1 0.019 14.2 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AAA_31 PF13614.6 gi|33152845|ref|NP_874198.1| - 0.013 15.4 0.2 0.04 13.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain F420_oxidored PF03807.17 gi|33152845|ref|NP_874198.1| - 0.015 15.8 3.2 2.7 8.6 1.0 3.0 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|33152845|ref|NP_874198.1| - 0.02 15.2 0.1 0.059 13.6 0.1 1.8 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox PF00070.27 gi|33152845|ref|NP_874198.1| - 0.13 12.8 0.1 0.3 11.7 0.1 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Epimerase_2 PF02350.19 gi|33152846|ref|NP_874199.1| - 4.6e-118 394.0 0.0 5.2e-118 393.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 gi|33152846|ref|NP_874199.1| - 0.00066 19.7 0.0 0.0012 18.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|33152846|ref|NP_874199.1| - 0.002 18.6 0.0 0.004 17.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_4 PF00953.21 gi|33152847|ref|NP_874200.1| - 3.6e-29 101.8 17.4 3.6e-29 101.8 17.4 2.7 3 0 0 3 3 3 1 Glycosyl transferase family 4 Amidohydro_1 PF01979.20 gi|33152848|ref|NP_874201.1| - 3.2e-39 135.2 1.1 4e-39 134.9 1.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|33152848|ref|NP_874201.1| - 3.6e-05 23.4 0.0 0.00082 19.0 0.0 2.4 3 0 0 3 3 3 1 Amidohydrolase family Glucosamine_iso PF01182.20 gi|33152849|ref|NP_874202.1| - 1.1e-17 64.7 0.0 1.7e-17 64.1 0.0 1.3 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DHDPS PF00701.22 gi|33152850|ref|NP_874203.1| - 3.2e-97 324.7 0.5 3.6e-97 324.6 0.5 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family NanE PF04131.14 gi|33152851|ref|NP_874204.1| - 3.2e-86 287.4 0.6 3.8e-86 287.2 0.6 1.0 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 gi|33152851|ref|NP_874204.1| - 0.027 13.5 2.0 0.36 9.8 0.1 2.4 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain TPP_enzyme_M_2 PF16582.5 gi|33152852|ref|NP_874205.1| - 3.1e-80 268.8 3.5 4.5e-80 268.2 3.5 1.2 1 0 0 1 1 1 1 Middle domain of thiamine pyrophosphate TPP_enzyme_N PF02776.18 gi|33152852|ref|NP_874205.1| - 8.2e-30 103.7 0.5 1.7e-29 102.6 0.1 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|33152852|ref|NP_874205.1| - 3.1e-08 33.6 0.1 1.3e-07 31.6 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Abhydrolase_1 PF00561.20 gi|33152853|ref|NP_874206.1| - 2.4e-17 63.4 0.1 3.1e-17 63.1 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|33152853|ref|NP_874206.1| - 5.1e-16 60.0 0.0 6.3e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 gi|33152853|ref|NP_874206.1| - 2.7e-06 27.7 0.0 5.5e-06 26.7 0.0 1.6 2 1 0 2 2 2 1 Thioesterase domain Hydrolase_4 PF12146.8 gi|33152853|ref|NP_874206.1| - 3.3e-05 23.3 0.1 7.7e-05 22.1 0.1 1.8 1 1 1 2 2 2 1 Serine aminopeptidase, S33 DUF676 PF05057.14 gi|33152853|ref|NP_874206.1| - 0.0001 21.9 0.0 0.00016 21.2 0.0 1.5 1 1 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 gi|33152853|ref|NP_874206.1| - 0.00011 21.6 0.0 0.11 11.8 0.0 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_2 PF02230.16 gi|33152853|ref|NP_874206.1| - 0.00034 20.5 0.1 0.045 13.6 0.0 2.4 1 1 1 2 2 2 1 Phospholipase/Carboxylesterase Palm_thioest PF02089.15 gi|33152853|ref|NP_874206.1| - 0.0012 18.8 0.0 0.0016 18.3 0.0 1.3 1 1 0 1 1 1 1 Palmitoyl protein thioesterase DUF726 PF05277.12 gi|33152853|ref|NP_874206.1| - 0.051 12.5 0.0 0.087 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Patatin PF01734.22 gi|33152853|ref|NP_874206.1| - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Patatin-like phospholipase Death PF00531.22 gi|33152853|ref|NP_874206.1| - 0.19 11.9 1.6 19 5.5 0.3 2.5 2 0 0 2 2 2 0 Death domain DUF2576 PF10845.8 gi|33152854|ref|NP_874207.1| - 0.019 14.5 1.7 0.28 10.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) Dr_adhesin PF12393.8 gi|33152854|ref|NP_874207.1| - 0.15 12.4 2.0 0.24 11.7 2.0 1.3 1 0 0 1 1 1 0 Dr family adhesin OMPdecase PF00215.24 gi|33152855|ref|NP_874208.1| - 1.9e-24 86.5 3.3 2.4e-24 86.2 3.3 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PTS_EIIA_2 PF00359.22 gi|33152856|ref|NP_874209.1| - 8.3e-31 106.8 0.0 9.5e-31 106.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EIIC-GAT PF03611.14 gi|33152857|ref|NP_874210.1| - 9.2e-125 416.8 41.1 1.4e-124 416.3 41.1 1.2 1 0 0 1 1 1 1 PTS system sugar-specific permease component PTS_IIB PF02302.17 gi|33152857|ref|NP_874210.1| - 2.8e-12 47.2 0.1 5.8e-12 46.2 0.1 1.6 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit VEGFR-2_TMD PF17988.1 gi|33152857|ref|NP_874210.1| - 4.5 6.8 8.8 7.9 6.0 1.2 3.5 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain Lactamase_B_3 PF13483.6 gi|33152858|ref|NP_874211.1| - 1.5e-08 34.7 0.2 2.4e-08 34.0 0.2 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|33152858|ref|NP_874211.1| - 3.9e-08 33.1 0.0 6.2e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|33152858|ref|NP_874211.1| - 0.015 15.3 1.9 0.015 15.3 1.9 1.8 2 1 0 2 2 2 0 Metallo-beta-lactamase superfamily DUF943 PF06092.12 gi|33152858|ref|NP_874211.1| - 0.14 11.8 0.2 0.35 10.5 0.1 1.6 1 1 0 1 1 1 0 Enterobacterial putative membrane protein (DUF943) DeoRC PF00455.22 gi|33152859|ref|NP_874212.1| - 2.4e-31 108.8 0.7 3.3e-31 108.4 0.7 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 gi|33152859|ref|NP_874212.1| - 1.3e-17 63.3 0.4 3.5e-17 61.9 0.1 1.9 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|33152859|ref|NP_874212.1| - 5.4e-08 32.7 3.7 6.4e-07 29.2 0.5 3.1 2 1 1 3 3 3 1 HTH domain Fe_dep_repress PF01325.19 gi|33152859|ref|NP_874212.1| - 0.00054 20.1 0.9 0.0023 18.1 0.3 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 gi|33152859|ref|NP_874212.1| - 0.0028 17.7 0.7 0.022 14.8 0.1 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|33152859|ref|NP_874212.1| - 0.0098 15.4 4.9 0.016 14.7 0.9 2.7 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding SNO PF01174.19 gi|33152859|ref|NP_874212.1| - 0.015 15.1 0.1 0.031 14.1 0.1 1.5 1 0 0 1 1 1 0 SNO glutamine amidotransferase family HTH_5 PF01022.20 gi|33152859|ref|NP_874212.1| - 0.032 14.1 4.8 0.33 10.9 0.4 3.1 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family HTH_39 PF14090.6 gi|33152859|ref|NP_874212.1| - 0.054 13.2 0.3 0.97 9.2 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain GntR PF00392.21 gi|33152859|ref|NP_874212.1| - 0.056 13.1 0.2 0.11 12.2 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_AsnC-type PF13404.6 gi|33152859|ref|NP_874212.1| - 0.071 13.0 0.3 0.21 11.5 0.1 1.8 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_17 PF12728.7 gi|33152859|ref|NP_874212.1| - 0.11 12.7 0.0 0.26 11.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain NlpE PF04170.12 gi|33152859|ref|NP_874212.1| - 0.13 13.3 0.2 0.29 12.1 0.2 1.6 1 0 0 1 1 1 0 NlpE N-terminal domain Arg_repressor PF01316.21 gi|33152859|ref|NP_874212.1| - 0.31 10.8 2.9 0.34 10.7 0.5 2.3 2 1 0 2 2 2 0 Arginine repressor, DNA binding domain MarR PF01047.22 gi|33152859|ref|NP_874212.1| - 0.6 10.1 3.7 4.4 7.3 0.4 2.6 3 0 0 3 3 3 0 MarR family AP_endonuc_2 PF01261.24 gi|33152860|ref|NP_874213.1| - 9.8e-34 116.6 0.0 1.3e-33 116.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Osmo_CC PF08946.10 gi|33152860|ref|NP_874213.1| - 0.1 12.9 0.1 0.84 9.9 0.0 2.4 3 0 0 3 3 3 0 Osmosensory transporter coiled coil Aldolase_II PF00596.21 gi|33152861|ref|NP_874214.1| - 1.1e-44 152.6 0.0 1.3e-44 152.3 0.0 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain FAD_binding_3 PF01494.19 gi|33152863|ref|NP_874216.1| - 4.4e-30 105.1 0.1 6.8e-29 101.2 0.1 2.0 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 gi|33152863|ref|NP_874216.1| - 1.1e-09 37.8 0.1 1.9e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Squalene epoxidase DAO PF01266.24 gi|33152863|ref|NP_874216.1| - 3.3e-07 30.2 0.4 7.2e-07 29.1 0.2 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|33152863|ref|NP_874216.1| - 2.8e-06 26.5 0.3 0.048 12.5 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|33152863|ref|NP_874216.1| - 1.9e-05 23.9 0.2 0.0044 16.1 0.2 2.3 2 0 0 2 2 2 2 Lycopene cyclase protein FAD_binding_2 PF00890.24 gi|33152863|ref|NP_874216.1| - 4.7e-05 22.7 0.5 0.00012 21.3 0.1 1.8 2 1 1 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|33152863|ref|NP_874216.1| - 0.00017 21.0 0.0 0.00032 20.0 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|33152863|ref|NP_874216.1| - 0.00054 20.1 0.1 0.0015 18.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|33152863|ref|NP_874216.1| - 0.0014 17.8 0.1 0.0024 17.0 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|33152863|ref|NP_874216.1| - 0.0019 18.8 0.1 0.0039 17.7 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|33152863|ref|NP_874216.1| - 0.0019 17.6 0.3 0.003 17.0 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|33152863|ref|NP_874216.1| - 0.0057 15.9 0.2 0.011 15.0 0.2 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|33152863|ref|NP_874216.1| - 0.0088 15.3 0.1 0.023 14.0 0.1 1.8 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|33152863|ref|NP_874216.1| - 0.029 13.7 0.8 0.11 11.8 0.2 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|33152863|ref|NP_874216.1| - 0.045 14.2 0.0 0.079 13.4 0.0 1.5 1 1 0 1 1 1 0 Putative NAD(P)-binding HI0933_like PF03486.14 gi|33152863|ref|NP_874216.1| - 0.048 12.4 0.4 0.098 11.3 0.4 1.5 1 0 0 1 1 1 0 HI0933-like protein Trp_Tyr_perm PF03222.13 gi|33152864|ref|NP_874217.1| - 1.2e-127 426.3 37.6 1.4e-127 426.1 37.6 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family AA_permease_2 PF13520.6 gi|33152864|ref|NP_874217.1| - 9.2e-11 41.2 47.2 2.6e-10 39.7 47.2 1.6 1 1 0 1 1 1 1 Amino acid permease Aa_trans PF01490.18 gi|33152864|ref|NP_874217.1| - 2.5e-09 36.4 22.4 2.5e-09 36.4 22.4 2.1 1 1 1 2 2 2 2 Transmembrane amino acid transporter protein PIG-P PF08510.12 gi|33152864|ref|NP_874217.1| - 9.2 6.2 16.7 2.5 8.1 0.2 3.6 3 0 0 3 3 3 0 PIG-P RNA_pol_Rpb1_1 PF04997.12 gi|33152865|ref|NP_874218.1| - 2.8e-87 293.0 0.0 4.8e-87 292.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 gi|33152865|ref|NP_874218.1| - 6.1e-77 258.6 0.2 9.5e-77 258.0 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 gi|33152865|ref|NP_874218.1| - 1.6e-36 126.0 0.0 7.8e-26 91.3 0.0 2.7 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|33152865|ref|NP_874218.1| - 4.1e-28 98.3 0.0 1e-27 97.0 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|33152865|ref|NP_874218.1| - 8.4e-19 67.5 0.2 2.2e-18 66.1 0.2 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 Apocytochr_F_C PF01333.19 gi|33152865|ref|NP_874218.1| - 0.026 14.5 0.2 0.19 11.8 0.0 2.3 2 0 0 2 2 2 0 Apocytochrome F, C-terminal RNA_pol_Rpb2_6 PF00562.28 gi|33152866|ref|NP_874219.1| - 1.2e-156 521.7 0.7 2.3e-155 517.5 0.3 2.7 3 0 0 3 3 3 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|33152866|ref|NP_874219.1| - 7e-49 166.1 0.0 1.7e-48 164.8 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 gi|33152866|ref|NP_874219.1| - 6.1e-31 106.4 0.0 1.6e-30 105.1 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 gi|33152866|ref|NP_874219.1| - 2.1e-28 99.2 0.1 1.7e-17 63.7 0.0 3.1 3 0 0 3 3 3 2 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|33152866|ref|NP_874219.1| - 3.2e-27 94.8 0.1 9.6e-27 93.2 0.1 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_45 PF10385.9 gi|33152866|ref|NP_874219.1| - 8e-22 77.3 0.0 7.7e-21 74.1 0.0 2.6 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain RelB PF04221.12 gi|33152866|ref|NP_874219.1| - 0.024 14.6 0.0 0.066 13.2 0.0 1.8 1 0 0 1 1 1 0 RelB antitoxin SPG4 PF17325.2 gi|33152866|ref|NP_874219.1| - 0.032 15.3 0.0 0.15 13.1 0.0 2.2 2 0 0 2 2 2 0 Stationary phase protein 4 DUF4140 PF13600.6 gi|33152866|ref|NP_874219.1| - 5.5 7.5 5.7 1 9.8 0.4 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Ribosomal_L12 PF00542.19 gi|33152868|ref|NP_874221.1| - 1.1e-30 105.8 5.6 1.1e-30 105.8 5.6 1.7 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 gi|33152868|ref|NP_874221.1| - 2.4e-14 52.7 16.9 2.4e-14 52.7 16.9 3.4 2 1 1 3 3 3 1 Ribosomal protein L7/L12 dimerisation domain MCR_alpha PF02249.17 gi|33152868|ref|NP_874221.1| - 0.021 15.2 0.7 0.029 14.8 0.7 1.3 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Ribosomal_60s PF00428.19 gi|33152868|ref|NP_874221.1| - 8.2 7.1 22.5 0.16 12.6 10.6 2.5 1 1 1 2 2 2 0 60s Acidic ribosomal protein Ribosomal_L10 PF00466.20 gi|33152869|ref|NP_874222.1| - 9.7e-29 99.5 0.1 1.7e-28 98.7 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_L1 PF00687.21 gi|33152870|ref|NP_874223.1| - 5.4e-52 176.5 0.1 6.9e-52 176.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family BAT PF15915.5 gi|33152870|ref|NP_874223.1| - 0.086 12.7 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 GAF and HTH_10 associated domain Ribosomal_L11_N PF03946.14 gi|33152871|ref|NP_874224.1| - 1.5e-32 111.2 0.2 3e-32 110.2 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|33152871|ref|NP_874224.1| - 4.6e-24 84.7 3.6 6.6e-24 84.2 3.6 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain NusG PF02357.19 gi|33152872|ref|NP_874225.1| - 7.7e-26 90.4 0.0 1.1e-25 90.0 0.0 1.2 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 gi|33152872|ref|NP_874225.1| - 2.4e-09 36.8 0.1 6e-09 35.6 0.1 1.7 1 0 0 1 1 1 1 KOW motif SecE PF00584.20 gi|33152873|ref|NP_874226.1| - 4.5e-19 68.1 3.3 4.5e-19 68.1 3.3 2.2 2 0 0 2 2 2 1 SecE/Sec61-gamma subunits of protein translocation complex DUF443 PF04276.12 gi|33152873|ref|NP_874226.1| - 0.03 14.1 2.1 0.037 13.8 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF443) DUF3784 PF12650.7 gi|33152873|ref|NP_874226.1| - 0.039 14.2 0.3 0.039 14.2 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Trp_oprn_chp PF09534.10 gi|33152873|ref|NP_874226.1| - 0.041 13.7 2.4 0.051 13.4 2.4 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) PRA1 PF03208.19 gi|33152873|ref|NP_874226.1| - 0.095 12.3 5.0 0.15 11.7 4.9 1.4 1 1 0 1 1 1 0 PRA1 family protein DUF2207 PF09972.9 gi|33152873|ref|NP_874226.1| - 0.74 8.5 6.8 2.1 7.0 6.8 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1516 PF07457.11 gi|33152873|ref|NP_874226.1| - 0.8 9.9 10.8 1.6 8.9 8.7 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1516) Phage_holin_3_6 PF07332.11 gi|33152873|ref|NP_874226.1| - 1.1 9.4 11.5 0.12 12.5 3.4 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Vma12 PF11712.8 gi|33152873|ref|NP_874226.1| - 1.6 8.8 3.4 6.9 6.7 3.4 2.0 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase OPT PF03169.15 gi|33152874|ref|NP_874227.1| - 2e-108 363.7 57.0 2.3e-108 363.5 57.0 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein Jagunal PF07086.12 gi|33152874|ref|NP_874227.1| - 0.3 11.1 7.1 0.21 11.6 4.0 2.3 2 0 0 2 2 2 0 Jagunal, ER re-organisation during oogenesis TssN PF17555.2 gi|33152874|ref|NP_874227.1| - 2.7 7.3 22.6 0.017 14.6 5.9 3.0 3 0 0 3 3 3 0 Type VI secretion system, TssN DNA_processg_A PF02481.15 gi|33152875|ref|NP_874228.1| - 3.9e-78 261.5 0.0 5e-78 261.2 0.0 1.1 1 0 0 1 1 1 1 DNA recombination-mediator protein A DprA_WH PF17782.1 gi|33152875|ref|NP_874228.1| - 2.7e-11 43.4 0.5 5.9e-11 42.3 0.1 1.8 2 0 0 2 2 2 1 DprA winged helix domain HHH_5 PF14520.6 gi|33152875|ref|NP_874228.1| - 0.0036 17.9 0.0 0.018 15.6 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain Pep_deformylase PF01327.21 gi|33152876|ref|NP_874229.1| - 1.1e-50 171.4 0.1 1.4e-50 171.0 0.1 1.1 1 0 0 1 1 1 1 Polypeptide deformylase Epimerase PF01370.21 gi|33152877|ref|NP_874230.1| - 1.6e-44 152.2 0.0 2e-44 151.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|33152877|ref|NP_874230.1| - 1.3e-20 74.1 0.0 1.7e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|33152877|ref|NP_874230.1| - 3.4e-14 52.5 0.0 5e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|33152877|ref|NP_874230.1| - 2.8e-07 29.9 0.0 1.1e-06 28.0 0.0 2.0 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|33152877|ref|NP_874230.1| - 9e-05 21.8 0.0 0.0006 19.1 0.0 2.1 2 0 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|33152877|ref|NP_874230.1| - 0.00031 20.0 0.0 0.011 14.9 0.0 2.2 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 gi|33152877|ref|NP_874230.1| - 0.12 12.3 0.1 0.26 11.2 0.1 1.7 1 1 0 1 1 1 0 KR domain Multi_Drug_Res PF00893.19 gi|33152878|ref|NP_874231.1| - 1.5e-22 80.0 6.5 2e-22 79.6 6.5 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein UPF0060 PF02694.15 gi|33152878|ref|NP_874231.1| - 0.02 15.1 3.9 0.025 14.8 3.9 1.2 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family EmrE PF13536.6 gi|33152878|ref|NP_874231.1| - 0.026 14.1 4.2 0.028 14.0 4.2 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter DUF2061 PF09834.9 gi|33152878|ref|NP_874231.1| - 0.033 14.7 2.1 0.033 14.7 2.1 2.3 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) EamA PF00892.20 gi|33152878|ref|NP_874231.1| - 0.15 12.3 17.0 0.29 11.3 17.0 1.6 1 1 0 1 1 1 0 EamA-like transporter family DUF406 PF04175.12 gi|33152879|ref|NP_874232.1| - 8e-32 109.6 0.9 1e-31 109.3 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF406) CarboxypepD_reg PF13620.6 gi|33152880|ref|NP_874233.1| - 0.041 14.1 0.0 0.051 13.8 0.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Phage_holin_3_6 PF07332.11 gi|33152880|ref|NP_874233.1| - 0.14 12.2 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4956 PF16316.5 gi|33152880|ref|NP_874233.1| - 0.18 11.5 0.2 0.21 11.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) SIS PF01380.22 gi|33152881|ref|NP_874234.1| - 7.5e-58 194.0 1.4 6.1e-32 110.2 0.9 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|33152881|ref|NP_874234.1| - 1.6e-20 73.6 0.1 3.9e-20 72.4 0.1 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|33152881|ref|NP_874234.1| - 1.4e-14 54.0 0.0 2.8e-14 53.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|33152881|ref|NP_874234.1| - 0.02 14.9 0.2 0.31 11.1 0.0 2.7 2 1 1 3 3 3 0 SIS domain GATase_4 PF13230.6 gi|33152881|ref|NP_874234.1| - 0.14 11.1 0.1 0.25 10.2 0.1 1.4 1 0 0 1 1 1 0 Glutamine amidotransferases class-II HMw1_D2 PF18254.1 gi|33152882|ref|NP_874235.1| - 1.5e-50 169.5 0.3 4e-50 168.1 0.3 1.8 1 0 0 1 1 1 1 HMW1 domain 2 HMW1C_N PF18071.1 gi|33152882|ref|NP_874235.1| - 1.6e-48 164.2 0.2 3.2e-48 163.2 0.2 1.5 1 0 0 1 1 1 1 HMW1C N-terminal Glyco_transf_41 PF13844.6 gi|33152882|ref|NP_874235.1| - 3.1e-07 29.2 0.0 0.0022 16.5 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 41 DUF5040 PF16443.5 gi|33152882|ref|NP_874235.1| - 0.0082 15.6 0.1 0.015 14.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5040) DNA_circ_N PF07157.12 gi|33152882|ref|NP_874235.1| - 0.04 14.3 0.3 14 6.2 0.0 3.6 4 0 0 4 4 4 0 DNA circularisation protein N-terminus Radical_SAM PF04055.21 gi|33152883|ref|NP_874236.1| - 3e-31 109.1 0.0 2.1e-29 103.0 0.0 2.5 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|33152883|ref|NP_874236.1| - 1.2e-20 73.4 0.0 2.4e-20 72.4 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM_2 PF18693.1 gi|33152883|ref|NP_874236.1| - 2.2e-20 72.6 1.9 4.3e-20 71.6 1.9 1.5 1 0 0 1 1 1 1 TRAM domain NTPase_1 PF03266.15 gi|33152883|ref|NP_874236.1| - 0.0063 16.4 0.3 1.8 8.5 0.0 2.4 2 0 0 2 2 2 2 NTPase CLP1_P PF16575.5 gi|33152883|ref|NP_874236.1| - 0.018 14.9 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop TFA2_Winged_2 PF18121.1 gi|33152883|ref|NP_874236.1| - 0.038 13.7 0.1 4.6 7.0 0.0 2.6 2 0 0 2 2 2 0 TFA2 Winged helix domain 2 Methyltransf_2 PF00891.18 gi|33152883|ref|NP_874236.1| - 0.042 13.1 0.0 0.083 12.2 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain UPF0180 PF03698.13 gi|33152883|ref|NP_874236.1| - 0.11 12.7 0.1 2.5 8.3 0.1 2.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) Sigma54_activat PF00158.26 gi|33152883|ref|NP_874236.1| - 0.31 10.7 1.8 0.86 9.3 0.0 2.5 4 0 0 4 4 4 0 Sigma-54 interaction domain PNP_UDP_1 PF01048.20 gi|33152885|ref|NP_874238.1| - 6.2e-47 159.8 2.7 7e-47 159.7 2.7 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily SlyX PF04102.12 gi|33152886|ref|NP_874239.1| - 2e-24 86.0 0.6 2.3e-24 85.8 0.6 1.1 1 0 0 1 1 1 1 SlyX PKcGMP_CC PF16808.5 gi|33152886|ref|NP_874239.1| - 0.00087 19.1 1.3 0.00089 19.1 0.1 1.6 2 0 0 2 2 2 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Wtap PF17098.5 gi|33152886|ref|NP_874239.1| - 0.029 14.3 0.8 0.036 14.0 0.8 1.3 1 0 0 1 1 1 0 WTAP/Mum2p family NPV_P10 PF05531.12 gi|33152886|ref|NP_874239.1| - 0.03 14.8 1.1 0.039 14.4 1.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Spc29 PF17082.5 gi|33152886|ref|NP_874239.1| - 0.037 13.9 0.4 0.045 13.6 0.4 1.1 1 0 0 1 1 1 0 Spindle Pole Component 29 DivIVA PF05103.13 gi|33152886|ref|NP_874239.1| - 0.088 12.9 2.6 0.17 11.9 2.6 1.5 1 1 0 1 1 1 0 DivIVA protein FKBP_C PF00254.28 gi|33152887|ref|NP_874240.1| - 9.7e-24 83.5 0.0 3.1e-23 81.9 0.0 1.8 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 gi|33152887|ref|NP_874240.1| - 9.2e-20 71.4 7.5 1.4e-19 70.8 7.5 1.3 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DUF1840 PF08895.11 gi|33152887|ref|NP_874240.1| - 0.0072 16.6 2.0 0.012 15.9 1.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF1840) Phage_lysozyme2 PF18013.1 gi|33152887|ref|NP_874240.1| - 0.061 13.3 0.8 0.11 12.5 0.8 1.4 1 0 0 1 1 1 0 Phage tail lysozyme THRAP3_BCLAF1 PF15440.6 gi|33152887|ref|NP_874240.1| - 0.16 11.0 1.6 0.19 10.7 1.6 1.0 1 0 0 1 1 1 0 THRAP3/BCLAF1 family LEM PF03020.15 gi|33152887|ref|NP_874240.1| - 1.4 8.5 4.2 0.25 10.9 0.3 1.8 2 0 0 2 2 2 0 LEM domain PAS_6 PF08348.11 gi|33152888|ref|NP_874241.1| - 6.3e-35 119.5 0.3 1.3e-34 118.5 0.1 1.6 2 0 0 2 2 2 1 YheO-like PAS domain HTH_22 PF13309.6 gi|33152888|ref|NP_874241.1| - 3.3e-19 68.7 0.5 5.9e-19 67.9 0.5 1.4 1 0 0 1 1 1 1 HTH domain HTH_7 PF02796.15 gi|33152888|ref|NP_874241.1| - 7.4e-05 22.7 0.4 0.0002 21.4 0.4 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|33152888|ref|NP_874241.1| - 0.0012 18.6 0.1 0.0023 17.7 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain dCache_1 PF02743.18 gi|33152888|ref|NP_874241.1| - 0.0022 17.9 0.4 0.0031 17.3 0.4 1.3 1 1 0 1 1 1 1 Cache domain DUF658 PF04936.12 gi|33152888|ref|NP_874241.1| - 0.0079 16.0 0.2 0.013 15.2 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF658) HTH_17 PF12728.7 gi|33152888|ref|NP_874241.1| - 0.0098 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|33152888|ref|NP_874241.1| - 0.077 13.0 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 HTH domain HTH_10 PF04967.12 gi|33152888|ref|NP_874241.1| - 0.098 12.5 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain MlaE PF02405.16 gi|33152888|ref|NP_874241.1| - 0.12 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Permease MlaE HTH_30 PF13556.6 gi|33152888|ref|NP_874241.1| - 0.13 12.1 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DrsE PF02635.15 gi|33152889|ref|NP_874242.1| - 1.1e-25 90.3 0.2 1.2e-25 90.1 0.2 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE PF02635.15 gi|33152890|ref|NP_874243.1| - 2.8e-19 69.6 0.1 3.1e-19 69.4 0.1 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.12 gi|33152891|ref|NP_874244.1| - 2.4e-12 46.8 0.0 2.9e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 DsrH like protein Asp_Glu_race PF01177.22 gi|33152892|ref|NP_874245.1| - 2.2e-25 89.8 0.0 3e-25 89.4 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase AsnC_trans_reg PF01037.21 gi|33152893|ref|NP_874246.1| - 7.4e-17 61.1 0.5 1.2e-16 60.4 0.5 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|33152893|ref|NP_874246.1| - 2.8e-12 46.0 0.1 5.5e-12 45.1 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|33152893|ref|NP_874246.1| - 3.8e-12 45.8 0.0 6.3e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 gi|33152893|ref|NP_874246.1| - 3.6e-05 23.7 0.0 8.1e-05 22.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|33152893|ref|NP_874246.1| - 0.0016 18.3 0.1 0.0032 17.4 0.1 1.6 1 0 0 1 1 1 1 HTH domain DUF4080 PF13311.6 gi|33152893|ref|NP_874246.1| - 0.015 15.5 0.2 0.024 14.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) HTH_Mga PF08280.11 gi|33152893|ref|NP_874246.1| - 0.035 14.1 0.0 0.084 12.9 0.0 1.6 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain ICAP-1_inte_bdg PF10480.9 gi|33152893|ref|NP_874246.1| - 0.07 13.1 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein SpoIIID PF12116.8 gi|33152893|ref|NP_874246.1| - 0.078 13.1 0.1 0.83 9.8 0.0 2.2 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_5 PF01022.20 gi|33152893|ref|NP_874246.1| - 0.095 12.6 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_41 PF14502.6 gi|33152893|ref|NP_874246.1| - 0.12 12.1 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_GPO PF05929.11 gi|33152893|ref|NP_874246.1| - 0.16 11.5 0.1 0.72 9.4 0.1 1.8 2 0 0 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase AsnA PF03590.15 gi|33152895|ref|NP_874248.1| - 5.2e-95 317.5 0.0 6.6e-95 317.2 0.0 1.1 1 0 0 1 1 1 1 Aspartate-ammonia ligase tRNA-synt_2 PF00152.20 gi|33152895|ref|NP_874248.1| - 0.0046 16.1 0.0 0.075 12.1 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) Ferric_reduct PF01794.19 gi|33152896|ref|NP_874249.1| - 1.5e-15 57.4 8.2 1.5e-15 57.4 8.2 2.3 2 1 1 3 3 3 2 Ferric reductase like transmembrane component DUF3094 PF11293.8 gi|33152896|ref|NP_874249.1| - 0.075 12.8 0.5 0.075 12.8 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) Cation_ATPase_C PF00689.21 gi|33152896|ref|NP_874249.1| - 2 8.1 13.3 0.66 9.7 9.8 1.9 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus DUF2070 PF09843.9 gi|33152896|ref|NP_874249.1| - 8.2 4.6 11.1 11 4.1 11.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Oxidored_molyb PF00174.19 gi|33152897|ref|NP_874250.1| - 3.3e-30 105.0 0.0 4.7e-30 104.5 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Sigma70_r2 PF04542.14 gi|33152898|ref|NP_874251.1| - 2.1e-13 49.8 0.2 3.4e-13 49.2 0.2 1.3 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4_2 PF08281.12 gi|33152898|ref|NP_874251.1| - 2.2e-09 36.8 0.1 4e-09 36.0 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|33152898|ref|NP_874251.1| - 0.0012 18.3 0.2 0.0021 17.5 0.2 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 pXO2-72 PF17443.2 gi|33152898|ref|NP_874251.1| - 0.0082 16.4 0.1 6.7 7.0 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized protein pXO2-72 zf-HC2 PF13490.6 gi|33152899|ref|NP_874252.1| - 0.0079 16.4 1.0 0.025 14.8 0.9 1.8 2 0 0 2 2 2 1 Putative zinc-finger tRNA-synt_2b PF00587.25 gi|33152900|ref|NP_874253.1| - 3.1e-48 164.1 0.0 4.3e-48 163.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 gi|33152900|ref|NP_874253.1| - 5.9e-25 87.7 0.2 1.1e-24 86.8 0.2 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain HGTP_anticodon PF03129.20 gi|33152900|ref|NP_874253.1| - 1.4e-20 73.2 0.0 3.2e-20 72.1 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain YadA_anchor PF03895.15 gi|33152901|ref|NP_874254.1| - 0.00018 21.6 2.2 0.00036 20.6 2.2 1.6 1 0 0 1 1 1 1 YadA-like membrane anchor domain Binary_toxB PF03495.14 gi|33152901|ref|NP_874254.1| - 0.03 14.5 0.0 0.069 13.4 0.0 1.6 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DASH_Ask1 PF08655.10 gi|33152901|ref|NP_874254.1| - 0.14 12.0 0.2 9.8 6.1 0.0 2.9 3 0 0 3 3 3 0 DASH complex subunit Ask1 RecG_wedge PF17191.4 gi|33152902|ref|NP_874255.1| - 1.9e-25 89.4 0.0 3.6e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 RecG wedge domain Helicase_C PF00271.31 gi|33152902|ref|NP_874255.1| - 3.6e-22 78.8 0.0 7.9e-17 61.6 0.0 2.5 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 gi|33152902|ref|NP_874255.1| - 1.3e-19 70.7 0.4 2.4e-19 69.8 0.4 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|33152902|ref|NP_874255.1| - 1.5e-12 47.8 0.1 2.8e-12 47.0 0.1 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit tRNA_anti-codon PF01336.25 gi|33152902|ref|NP_874255.1| - 2.8e-05 24.0 0.1 6.3e-05 22.9 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain AAA_30 PF13604.6 gi|33152902|ref|NP_874255.1| - 0.00019 21.2 0.8 0.00019 21.2 0.8 2.4 2 1 1 3 3 3 1 AAA domain SecA_DEAD PF07517.14 gi|33152902|ref|NP_874255.1| - 0.0002 20.8 0.0 0.00043 19.7 0.0 1.5 1 0 0 1 1 1 1 SecA DEAD-like domain SNF2_N PF00176.23 gi|33152902|ref|NP_874255.1| - 0.0015 17.3 0.0 0.0024 16.6 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain AAA_22 PF13401.6 gi|33152902|ref|NP_874255.1| - 0.014 15.6 0.8 2.9 8.2 0.1 3.6 1 1 2 3 3 3 0 AAA domain Cdd1 PF11731.8 gi|33152902|ref|NP_874255.1| - 0.03 14.6 0.0 0.2 11.9 0.0 2.2 2 0 0 2 2 2 0 Pathogenicity locus DUF2075 PF09848.9 gi|33152902|ref|NP_874255.1| - 0.038 13.2 0.1 0.063 12.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Glyco_tran_WecB PF03808.13 gi|33152902|ref|NP_874255.1| - 0.088 12.7 0.5 1.1 9.2 0.1 2.3 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family TsaE PF02367.17 gi|33152902|ref|NP_874255.1| - 0.093 12.7 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Helicase_RecD PF05127.14 gi|33152902|ref|NP_874255.1| - 0.11 12.4 0.1 0.35 10.7 0.1 1.9 2 0 0 2 2 2 0 Helicase RdDM_RDM1 PF09187.10 gi|33152902|ref|NP_874255.1| - 0.12 12.5 0.3 0.73 9.9 0.0 2.3 2 0 0 2 2 2 0 RNA-directed DNA methylation 1 RNA_pol_Rpb6 PF01192.22 gi|33152903|ref|NP_874256.1| - 3.9e-14 52.3 0.2 5.8e-14 51.8 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 HD_4 PF13328.6 gi|33152904|ref|NP_874257.1| - 5.8e-54 182.1 1.0 1.2e-53 181.1 1.0 1.5 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 gi|33152904|ref|NP_874257.1| - 5.1e-33 113.8 0.3 5.1e-33 113.8 0.3 3.3 3 0 0 3 3 3 1 Region found in RelA / SpoT proteins TGS PF02824.21 gi|33152904|ref|NP_874257.1| - 1.3e-19 70.0 0.0 2.6e-19 69.0 0.0 1.5 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 gi|33152904|ref|NP_874257.1| - 2.2e-13 50.6 3.9 8.7e-13 48.7 3.9 2.0 1 0 0 1 1 1 1 ACT domain HD PF01966.22 gi|33152904|ref|NP_874257.1| - 2.7e-13 50.2 1.8 6.4e-13 49.0 0.8 2.1 2 0 0 2 2 2 1 HD domain ACT PF01842.25 gi|33152904|ref|NP_874257.1| - 3e-06 26.9 0.3 0.00011 21.9 0.1 2.9 3 0 0 3 3 3 1 ACT domain Cas9_PI PF16595.5 gi|33152904|ref|NP_874257.1| - 0.17 11.7 2.3 1.6 8.6 1.2 2.2 2 0 0 2 2 2 0 PAM-interacting domain of CRISPR-associated endonuclease Cas9 4HB_MCP_1 PF12729.7 gi|33152904|ref|NP_874257.1| - 0.22 11.0 6.1 0.11 12.0 0.2 2.6 3 0 0 3 3 3 0 Four helix bundle sensory module for signal transduction ECH_1 PF00378.20 gi|33152905|ref|NP_874258.1| - 5.2e-80 268.4 0.0 6.2e-80 268.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|33152905|ref|NP_874258.1| - 2e-22 80.1 0.1 2.5e-22 79.8 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase SDH_sah PF01972.16 gi|33152905|ref|NP_874258.1| - 0.17 10.9 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Peptidase_S49 PF01343.18 gi|33152905|ref|NP_874258.1| - 0.17 11.8 0.1 3.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Peptidase family S49 Ribosomal_L36 PF00444.18 gi|33152906|ref|NP_874259.1| - 2.9e-17 62.6 3.2 3.3e-17 62.4 3.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L36 Ribosomal_L31 PF01197.18 gi|33152907|ref|NP_874260.1| - 3.6e-21 75.1 0.1 4.2e-21 74.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L31 Ribul_P_3_epim PF00834.19 gi|33152908|ref|NP_874261.1| - 5.1e-89 296.9 0.1 5.9e-89 296.7 0.1 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|33152908|ref|NP_874261.1| - 5.7e-06 26.2 0.0 0.0022 17.8 0.0 2.2 2 0 0 2 2 2 2 Quinolinate phosphoribosyl transferase, C-terminal domain His_biosynth PF00977.21 gi|33152908|ref|NP_874261.1| - 0.029 13.8 0.0 0.074 12.5 0.0 1.6 1 0 0 1 1 1 0 Histidine biosynthesis protein Orbi_VP5 PF00901.17 gi|33152908|ref|NP_874261.1| - 0.073 11.5 0.1 0.12 10.7 0.1 1.2 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 PP-binding PF00550.25 gi|33152910|ref|NP_874263.1| - 1.9e-17 63.4 0.4 2.1e-17 63.2 0.4 1.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 gi|33152910|ref|NP_874263.1| - 4.1e-07 30.1 1.1 4.6e-07 30.0 1.1 1.2 1 1 0 1 1 1 1 Acyl-carrier Ribosomal_L12_N PF16320.5 gi|33152910|ref|NP_874263.1| - 0.011 15.4 0.8 0.02 14.6 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain Ribosomal_L50 PF10501.9 gi|33152910|ref|NP_874263.1| - 0.039 14.1 0.0 0.063 13.4 0.0 1.3 1 1 0 1 1 1 0 Ribosomal subunit 39S YceG PF02618.16 gi|33152911|ref|NP_874264.1| - 6.3e-84 281.8 0.8 7.3e-84 281.6 0.8 1.0 1 0 0 1 1 1 1 YceG-like family DED PF01335.21 gi|33152911|ref|NP_874264.1| - 0.034 14.4 2.2 0.062 13.6 0.4 2.3 2 0 0 2 2 2 0 Death effector domain Thymidylate_kin PF02223.17 gi|33152912|ref|NP_874265.1| - 1.7e-56 190.9 0.0 1.9e-56 190.7 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|33152912|ref|NP_874265.1| - 0.0058 16.5 0.0 0.086 12.7 0.0 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_28 PF13521.6 gi|33152912|ref|NP_874265.1| - 0.008 16.4 0.0 0.0091 16.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|33152912|ref|NP_874265.1| - 0.029 14.6 0.0 0.058 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|33152912|ref|NP_874265.1| - 0.046 14.1 0.3 0.14 12.6 0.3 1.8 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|33152912|ref|NP_874265.1| - 0.053 13.4 0.1 0.079 12.9 0.1 1.4 1 1 0 1 1 1 0 NACHT domain TsaE PF02367.17 gi|33152912|ref|NP_874265.1| - 0.15 12.0 0.2 0.27 11.3 0.2 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNA_pol3_delta2 PF13177.6 gi|33152913|ref|NP_874266.1| - 4.6e-42 143.6 0.0 7.3e-42 142.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit DNApol3-delta_C PF09115.10 gi|33152913|ref|NP_874266.1| - 1.5e-27 96.5 10.0 3.5e-27 95.2 9.5 1.9 2 0 0 2 2 2 1 DNA polymerase III, delta subunit, C terminal zf-U1 PF06220.12 gi|33152913|ref|NP_874266.1| - 0.61 9.9 0.0 0.61 9.9 0.0 2.7 3 0 0 3 3 3 0 U1 zinc finger TatD_DNase PF01026.21 gi|33152914|ref|NP_874267.1| - 5.6e-80 268.4 0.2 6.4e-80 268.2 0.2 1.0 1 0 0 1 1 1 1 TatD related DNase DUF1523 PF07509.11 gi|33152915|ref|NP_874268.1| - 1e-65 220.4 0.9 1.2e-65 220.2 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1523) Metallophos PF00149.28 gi|33152916|ref|NP_874269.1| - 1.7e-09 38.5 0.3 3.3e-09 37.5 0.3 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|33152916|ref|NP_874269.1| - 7.7e-09 35.9 0.3 2.7e-08 34.2 0.3 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF454 PF04304.13 gi|33152917|ref|NP_874270.1| - 1.5e-39 134.5 3.2 1.8e-39 134.3 3.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF454) Phage_integrase PF00589.22 gi|33152918|ref|NP_874271.1| - 1.4e-48 165.0 0.1 2.4e-48 164.2 0.1 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|33152918|ref|NP_874271.1| - 6e-17 61.7 3.3 7.8e-17 61.4 0.2 2.6 3 0 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain DUF3435 PF11917.8 gi|33152918|ref|NP_874271.1| - 0.006 15.6 0.2 0.011 14.7 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3435) Integrase_1 PF12835.7 gi|33152918|ref|NP_874271.1| - 0.13 12.4 0.7 0.59 10.2 0.7 2.1 1 1 0 1 1 1 0 Integrase DUF5377 PF17347.2 gi|33152919|ref|NP_874272.1| - 7.4e-49 164.1 0.2 8.3e-49 163.9 0.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5377) tRNA_synt_2f PF02092.17 gi|33152920|ref|NP_874273.1| - 1.7e-209 697.2 0.1 1.7e-209 697.2 0.1 1.3 2 0 0 2 2 2 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 gi|33152920|ref|NP_874273.1| - 1.3e-07 31.8 2.1 1.7e-07 31.4 0.6 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain Methyltransf_25 PF13649.6 gi|33152920|ref|NP_874273.1| - 0.079 13.7 0.2 0.61 10.8 0.1 2.5 2 0 0 2 2 2 0 Methyltransferase domain tRNA-synt_2e PF02091.15 gi|33152921|ref|NP_874274.1| - 2.1e-148 493.0 0.0 2.4e-148 492.8 0.0 1.0 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit Glyco_hydro_64 PF16483.5 gi|33152921|ref|NP_874274.1| - 0.19 11.0 0.4 0.28 10.4 0.4 1.2 1 0 0 1 1 1 0 Beta-1,3-glucanase Cupin_4 PF08007.12 gi|33152923|ref|NP_874276.1| - 2e-94 316.7 0.1 2.3e-94 316.4 0.1 1.0 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 gi|33152923|ref|NP_874276.1| - 0.037 13.8 0.2 2 8.1 0.0 2.7 2 1 0 3 3 3 0 Cupin-like domain Cupin_2 PF07883.11 gi|33152923|ref|NP_874276.1| - 0.1 12.4 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Cupin domain Ribosomal_L19 PF01245.20 gi|33152924|ref|NP_874277.1| - 1.4e-47 160.2 2.7 1.6e-47 160.1 2.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 tRNA_m1G_MT PF01746.21 gi|33152925|ref|NP_874278.1| - 3.3e-66 222.7 0.0 3.8e-66 222.5 0.0 1.0 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase RimM PF01782.18 gi|33152926|ref|NP_874279.1| - 1e-24 86.5 0.0 1.6e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 gi|33152926|ref|NP_874279.1| - 7.9e-08 32.3 0.1 1.7e-07 31.2 0.1 1.5 1 0 0 1 1 1 1 PRC-barrel domain Ribosomal_S16 PF00886.19 gi|33152927|ref|NP_874280.1| - 6.1e-23 80.6 0.0 7.5e-23 80.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S16 Ribosomal_L17 PF01196.19 gi|33152928|ref|NP_874281.1| - 2.9e-35 121.1 0.0 3.4e-35 120.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 RNA_pol_A_CTD PF03118.15 gi|33152929|ref|NP_874282.1| - 4e-24 84.1 0.1 7e-24 83.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_L PF01193.24 gi|33152929|ref|NP_874282.1| - 6.6e-24 83.1 0.0 1.1e-23 82.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_A_bac PF01000.26 gi|33152929|ref|NP_874282.1| - 5.8e-23 81.4 0.1 1.2e-22 80.4 0.0 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L_2 PF13656.6 gi|33152929|ref|NP_874282.1| - 4.6e-05 23.1 0.0 0.51 10.1 0.0 2.6 2 0 0 2 2 2 2 RNA polymerase Rpb3/Rpb11 dimerisation domain BetaGal_dom3 PF13363.6 gi|33152929|ref|NP_874282.1| - 0.11 12.1 0.2 0.7 9.5 0.0 2.2 2 0 0 2 2 2 0 Beta-galactosidase, domain 3 Ribosomal_S4 PF00163.19 gi|33152930|ref|NP_874283.1| - 7.7e-32 110.1 1.8 1.3e-31 109.4 1.8 1.3 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 gi|33152930|ref|NP_874283.1| - 1.7e-18 66.1 0.6 3.5e-18 65.0 0.6 1.6 1 0 0 1 1 1 1 S4 domain E1_dh PF00676.20 gi|33152930|ref|NP_874283.1| - 0.016 14.2 0.1 0.022 13.7 0.1 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component S4_2 PF13275.6 gi|33152930|ref|NP_874283.1| - 0.019 14.8 0.2 0.032 14.0 0.2 1.4 1 0 0 1 1 1 0 S4 domain TyrRSs_C PF16714.5 gi|33152930|ref|NP_874283.1| - 0.026 14.3 0.0 0.047 13.5 0.0 1.5 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain Ribosomal_S11 PF00411.19 gi|33152931|ref|NP_874284.1| - 3.1e-54 182.1 0.6 3.7e-54 181.8 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_S13 PF00416.22 gi|33152932|ref|NP_874285.1| - 6.7e-35 120.3 8.2 3.8e-33 114.6 8.2 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|33152932|ref|NP_874285.1| - 0.00023 20.0 0.0 0.00026 19.9 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) HHH_6 PF14579.6 gi|33152932|ref|NP_874285.1| - 0.033 14.5 0.7 6 7.2 0.1 2.2 1 1 1 2 2 2 0 Helix-hairpin-helix motif PsbU PF06514.11 gi|33152932|ref|NP_874285.1| - 0.19 11.7 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) Ribosomal_L36 PF00444.18 gi|33152933|ref|NP_874286.1| - 1.1e-19 70.3 10.4 1.2e-19 70.2 10.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L36 SecY PF00344.20 gi|33152934|ref|NP_874287.1| - 1.9e-111 372.2 20.6 2.4e-111 371.9 20.6 1.1 1 0 0 1 1 1 1 SecY translocase SieB PF14163.6 gi|33152934|ref|NP_874287.1| - 0.025 14.1 0.4 0.025 14.1 0.4 2.9 3 0 0 3 3 3 0 Super-infection exclusion protein B Ribosomal_L27A PF00828.19 gi|33152935|ref|NP_874288.1| - 1.4e-31 109.9 3.2 1.7e-31 109.5 3.2 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L30 PF00327.20 gi|33152936|ref|NP_874289.1| - 1.6e-18 66.3 0.4 1.8e-18 66.1 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5_C PF03719.15 gi|33152937|ref|NP_874290.1| - 2.9e-31 106.7 0.5 5.4e-31 105.9 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|33152937|ref|NP_874290.1| - 1.3e-29 101.9 3.2 1.3e-29 101.9 3.2 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_L18p PF00861.22 gi|33152938|ref|NP_874291.1| - 2.7e-41 140.6 5.1 3e-41 140.5 5.1 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L5e PF17144.4 gi|33152938|ref|NP_874291.1| - 0.0014 18.6 0.1 0.0017 18.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 TM1506 PF08973.10 gi|33152938|ref|NP_874291.1| - 0.0057 16.3 0.2 0.0068 16.1 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1893) Ribosomal_L6 PF00347.23 gi|33152939|ref|NP_874292.1| - 2.1e-39 134.1 0.3 2.8e-19 69.6 0.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_S8 PF00410.19 gi|33152940|ref|NP_874293.1| - 2.9e-48 163.0 0.2 3.2e-48 162.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|33152941|ref|NP_874294.1| - 3.2e-25 87.6 1.0 4.4e-25 87.2 1.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Ribosomal_L5_C PF00673.21 gi|33152942|ref|NP_874295.1| - 2.8e-40 136.4 0.0 4.1e-40 135.9 0.0 1.2 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|33152942|ref|NP_874295.1| - 4.9e-29 100.4 0.2 8.9e-29 99.6 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 DUF2862 PF11061.8 gi|33152942|ref|NP_874295.1| - 0.076 12.9 0.0 0.33 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2862) ribosomal_L24 PF17136.4 gi|33152943|ref|NP_874296.1| - 3.2e-22 78.7 1.2 3.8e-22 78.4 0.1 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 gi|33152943|ref|NP_874296.1| - 2.7e-06 27.1 1.5 5e-06 26.3 1.5 1.5 1 0 0 1 1 1 1 KOW motif Ribosomal_L14 PF00238.19 gi|33152944|ref|NP_874297.1| - 4.1e-55 185.1 1.1 4.5e-55 185.0 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DDE_Tnp_IS1 PF03400.13 gi|33152945|ref|NP_874298.1| - 3.7e-78 260.2 0.8 4.4e-78 260.0 0.8 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 gi|33152945|ref|NP_874298.1| - 0.055 13.7 0.4 0.21 11.8 0.4 1.8 1 1 0 1 1 1 0 DDE domain HTH_Tnp_IS1 PF12759.7 gi|33152946|ref|NP_874299.1| - 3.4e-31 106.6 0.5 5.1e-31 106.0 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 gi|33152946|ref|NP_874299.1| - 5.9e-22 77.1 6.2 1.4e-21 75.9 6.2 1.6 1 0 0 1 1 1 1 InsA N-terminal domain FdhE PF04216.12 gi|33152946|ref|NP_874299.1| - 0.003 17.5 1.1 0.0032 17.4 1.1 1.1 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation zinc_ribbon_4 PF13717.6 gi|33152946|ref|NP_874299.1| - 0.0062 16.4 2.9 0.014 15.3 2.9 1.6 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|33152946|ref|NP_874299.1| - 0.0079 15.9 0.8 0.013 15.2 0.8 1.3 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein HTH_23 PF13384.6 gi|33152946|ref|NP_874299.1| - 0.012 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 gi|33152946|ref|NP_874299.1| - 0.02 15.0 0.0 0.03 14.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Zn_Tnp_IS1595 PF12760.7 gi|33152946|ref|NP_874299.1| - 0.059 13.3 1.8 0.12 12.4 1.8 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Elf1 PF05129.13 gi|33152946|ref|NP_874299.1| - 0.063 13.3 0.2 0.078 13.0 0.2 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-Dof PF02701.15 gi|33152946|ref|NP_874299.1| - 0.087 13.0 4.6 0.19 11.9 4.3 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger zf-ISL3 PF14690.6 gi|33152946|ref|NP_874299.1| - 0.57 10.9 5.9 5.3 7.8 0.2 2.6 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Ribosomal_S17 PF00366.20 gi|33152949|ref|NP_874302.1| - 4.3e-32 110.0 2.9 5.1e-32 109.8 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L29 PF00831.23 gi|33152950|ref|NP_874303.1| - 6.2e-23 80.5 6.6 6.9e-23 80.4 6.6 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein MRP-L47 PF06984.13 gi|33152950|ref|NP_874303.1| - 0.00037 20.6 1.9 0.00045 20.3 1.9 1.1 1 0 0 1 1 1 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Ribosomal_L16 PF00252.18 gi|33152951|ref|NP_874304.1| - 3.5e-46 156.5 1.3 3.9e-46 156.3 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF982 PF06169.12 gi|33152951|ref|NP_874304.1| - 0.42 10.7 2.8 9.6 6.3 0.2 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF982) Ribosomal_S3_C PF00189.20 gi|33152952|ref|NP_874305.1| - 2.1e-42 143.5 1.0 4e-42 142.6 1.0 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|33152952|ref|NP_874305.1| - 8.8e-20 70.3 3.3 2e-19 69.2 3.3 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|33152952|ref|NP_874305.1| - 0.00079 19.3 0.2 0.0022 17.8 0.2 1.8 1 1 1 2 2 2 1 KH domain MRP-S24 PF14955.6 gi|33152952|ref|NP_874305.1| - 0.024 14.6 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 Ribosomal_L22 PF00237.19 gi|33152953|ref|NP_874306.1| - 1.7e-35 121.4 2.0 1.9e-35 121.2 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e KORA PF16509.5 gi|33152953|ref|NP_874306.1| - 0.08 13.2 0.3 0.13 12.5 0.3 1.4 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor Ribosomal_S19 PF00203.21 gi|33152954|ref|NP_874307.1| - 1.6e-36 124.1 0.0 1.8e-36 123.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 Oest_recep PF02159.15 gi|33152954|ref|NP_874307.1| - 0.034 14.6 0.0 0.04 14.4 0.0 1.1 1 0 0 1 1 1 0 Oestrogen receptor Ribosomal_L2_C PF03947.18 gi|33152955|ref|NP_874308.1| - 1.4e-56 190.1 3.2 2.3e-56 189.4 3.2 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|33152955|ref|NP_874308.1| - 1.2e-33 114.9 0.8 5.1e-33 112.9 0.3 2.2 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 gi|33152956|ref|NP_874309.1| - 2.5e-32 111.1 2.5 2.9e-32 110.9 2.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L4 PF00573.22 gi|33152957|ref|NP_874310.1| - 5.6e-64 215.4 1.0 6.2e-64 215.2 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|33152958|ref|NP_874311.1| - 3.6e-13 49.2 10.0 2.1e-12 46.7 6.2 2.5 1 1 2 3 3 3 2 Ribosomal protein L3 Ribosomal_S10 PF00338.22 gi|33152959|ref|NP_874312.1| - 6.2e-35 119.4 0.1 6.9e-35 119.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e TfoX_C PF04994.13 gi|33152960|ref|NP_874313.1| - 4.5e-23 81.1 1.7 8.8e-23 80.2 1.7 1.5 1 0 0 1 1 1 1 TfoX C-terminal domain TfoX_N PF04993.13 gi|33152960|ref|NP_874313.1| - 2e-18 66.4 0.0 7.4e-18 64.6 0.0 1.9 2 0 0 2 2 2 1 TfoX N-terminal domain Lyase_1 PF00206.20 gi|33152961|ref|NP_874314.1| - 3.1e-109 365.2 0.2 4.1e-109 364.7 0.2 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|33152961|ref|NP_874314.1| - 4e-26 91.2 0.1 1.1e-25 89.8 0.1 1.8 1 0 0 1 1 1 1 Fumarase C C-terminus MurJ PF03023.14 gi|33152962|ref|NP_874315.1| - 5.2e-139 463.7 34.7 6.6e-139 463.4 34.7 1.1 1 0 0 1 1 1 1 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 gi|33152962|ref|NP_874315.1| - 1.9e-09 37.7 21.7 1.9e-09 37.7 21.7 4.5 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain ApoO PF09769.9 gi|33152962|ref|NP_874315.1| - 0.06 13.3 1.7 65 3.5 0.2 3.8 3 0 0 3 3 3 0 Apolipoprotein O Ribosomal_S20p PF01649.18 gi|161511520|ref|NP_874317.2| - 1.8e-26 92.6 14.7 2e-26 92.4 14.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 UPF0253 PF06786.12 gi|161511520|ref|NP_874317.2| - 0.051 13.9 0.1 0.073 13.4 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) TrkA_N PF02254.18 gi|33152965|ref|NP_874318.1| - 1.2e-52 177.1 6.1 1.9e-27 95.8 0.3 3.2 3 0 0 3 3 3 2 TrkA-N domain TrkA_C PF02080.21 gi|33152965|ref|NP_874318.1| - 6.4e-31 106.0 0.9 3.3e-14 52.5 0.3 3.1 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|33152965|ref|NP_874318.1| - 4.5e-11 43.1 0.5 7.4e-05 23.1 0.1 2.8 2 1 1 3 3 3 2 Putative NAD(P)-binding ApbA PF02558.16 gi|33152965|ref|NP_874318.1| - 4.1e-09 36.3 0.3 0.00097 18.8 0.1 2.9 2 2 0 2 2 2 2 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|33152965|ref|NP_874318.1| - 9.6e-09 35.7 0.9 0.02 15.4 0.0 4.1 2 2 1 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|33152965|ref|NP_874318.1| - 1.3e-08 35.2 0.6 0.004 17.4 0.0 2.9 3 0 0 3 3 2 2 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|33152965|ref|NP_874318.1| - 9.3e-08 32.2 0.4 0.015 15.2 0.0 2.6 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|33152965|ref|NP_874318.1| - 1.3e-07 31.7 0.0 0.0081 16.2 0.0 2.7 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 gi|33152965|ref|NP_874318.1| - 3.9e-07 30.2 0.4 0.0023 18.0 0.1 2.9 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 gi|33152965|ref|NP_874318.1| - 5.4e-06 26.9 0.0 0.28 11.8 0.0 3.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DUF1188 PF06690.11 gi|33152965|ref|NP_874318.1| - 1.1e-05 25.1 0.1 0.02 14.4 0.1 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) Pyr_redox_2 PF07992.14 gi|33152965|ref|NP_874318.1| - 2.6e-05 23.6 0.0 0.17 11.1 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|33152965|ref|NP_874318.1| - 0.00011 21.6 0.7 0.13 11.5 0.0 2.7 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 gi|33152965|ref|NP_874318.1| - 0.00013 22.2 1.7 0.045 13.9 0.0 3.2 3 1 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|33152965|ref|NP_874318.1| - 0.00021 20.9 1.5 0.041 13.5 0.0 3.5 3 1 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 gi|33152965|ref|NP_874318.1| - 0.00076 19.2 0.0 0.74 9.3 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Epimerase PF01370.21 gi|33152965|ref|NP_874318.1| - 0.0015 18.0 0.2 0.009 15.5 0.1 2.0 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family ThiF PF00899.21 gi|33152965|ref|NP_874318.1| - 0.0025 17.2 0.4 0.094 12.1 0.1 2.5 2 0 0 2 2 2 1 ThiF family FAD_binding_3 PF01494.19 gi|33152965|ref|NP_874318.1| - 0.017 14.4 0.0 1.3 8.2 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.6 gi|33152965|ref|NP_874318.1| - 0.04 14.1 0.0 0.52 10.6 0.0 2.5 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Staph_opine_DH PF10100.9 gi|33152965|ref|NP_874318.1| - 0.048 12.3 0.5 0.13 10.9 0.1 2.0 2 1 0 2 2 2 0 Staphylopine dehydrogenase XdhC_C PF13478.6 gi|33152965|ref|NP_874318.1| - 0.1 13.1 0.2 0.79 10.2 0.1 2.3 2 1 0 2 2 2 0 XdhC Rossmann domain Methyltr_RsmB-F PF01189.17 gi|33152966|ref|NP_874319.1| - 1.3e-69 233.9 0.0 1.9e-69 233.3 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F NusB PF01029.18 gi|33152966|ref|NP_874319.1| - 4.5e-23 82.0 0.0 7.7e-23 81.2 0.0 1.4 1 0 0 1 1 1 1 NusB family Methyltransf_31 PF13847.6 gi|33152966|ref|NP_874319.1| - 1.6e-07 31.2 0.0 2.9e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|33152966|ref|NP_874319.1| - 2.4e-06 28.2 0.0 8.3e-06 26.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain FtsJ PF01728.19 gi|33152966|ref|NP_874319.1| - 3.3e-06 27.3 0.0 5.9e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_5 PF01795.19 gi|33152966|ref|NP_874319.1| - 0.004 16.7 0.0 0.0089 15.6 0.0 1.5 1 0 0 1 1 1 1 MraW methylase family Methyltransf_4 PF02390.17 gi|33152966|ref|NP_874319.1| - 0.058 12.9 0.0 2.2 7.7 0.0 2.4 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_11 PF08241.12 gi|33152966|ref|NP_874319.1| - 0.067 13.8 0.0 0.46 11.2 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|33152966|ref|NP_874319.1| - 0.12 11.9 0.0 0.35 10.4 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|33152966|ref|NP_874319.1| - 0.14 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|33152966|ref|NP_874319.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.12 gi|33152966|ref|NP_874319.1| - 0.14 12.9 0.0 1.1 10.0 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain GTP_EFTU PF00009.27 gi|33152967|ref|NP_874320.1| - 2.5e-26 92.4 0.1 1e-25 90.4 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SelB-wing_3 PF09107.11 gi|33152967|ref|NP_874320.1| - 5.8e-16 57.9 0.2 1.5e-15 56.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor SelB, winged helix SelB-wing_2 PF09106.11 gi|33152967|ref|NP_874320.1| - 6e-16 58.4 0.8 2.2e-15 56.6 0.4 2.1 2 0 0 2 2 2 1 Elongation factor SelB, winged helix MMR_HSR1 PF01926.23 gi|33152967|ref|NP_874320.1| - 1.9e-07 31.2 0.0 5.8e-07 29.6 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|33152967|ref|NP_874320.1| - 2.9e-06 27.6 0.2 8e-06 26.2 0.0 1.9 2 0 0 2 2 2 1 Elongation factor Tu domain 2 SRPRB PF09439.10 gi|33152967|ref|NP_874320.1| - 0.0029 17.1 0.0 0.013 14.9 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 gi|33152967|ref|NP_874320.1| - 0.0044 16.8 0.1 1.2 8.9 0.0 2.5 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|33152967|ref|NP_874320.1| - 0.0066 16.0 1.2 0.16 11.5 1.2 2.7 1 1 0 1 1 1 1 Ferrous iron transport protein B SelA PF03841.13 gi|33152968|ref|NP_874321.1| - 1.1e-171 570.9 0.9 1.6e-171 570.3 0.9 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Se-cys_synth_N PF12390.8 gi|33152968|ref|NP_874321.1| - 2.4e-08 34.0 0.0 8.5e-08 32.3 0.0 2.0 2 0 0 2 2 2 1 Selenocysteine synthase N terminal Cys_Met_Meta_PP PF01053.20 gi|33152968|ref|NP_874321.1| - 0.00035 19.2 0.2 0.0008 18.0 0.2 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Flavodoxin_1 PF00258.25 gi|33152970|ref|NP_874323.1| - 2.3e-24 86.2 0.0 2.7e-24 86.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|33152970|ref|NP_874323.1| - 0.00037 20.7 0.0 0.00043 20.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain ISPD_C PF18706.1 gi|33152970|ref|NP_874323.1| - 0.12 12.0 0.2 0.25 11.0 0.1 1.5 2 0 0 2 2 2 0 D-ribitol-5-phosphate cytidylyltransferase C-terminal domain SRP54 PF00448.22 gi|33152972|ref|NP_874325.1| - 2.3e-75 252.6 0.6 3.8e-75 251.9 0.6 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|33152972|ref|NP_874325.1| - 1.1e-31 109.3 6.3 1.1e-31 109.3 6.3 3.0 4 0 0 4 4 3 1 Signal peptide binding domain SRP54_N PF02881.19 gi|33152972|ref|NP_874325.1| - 3.3e-21 75.3 1.2 3.3e-21 75.3 1.2 2.9 2 1 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|33152972|ref|NP_874325.1| - 3.8e-08 33.4 0.2 3.7e-07 30.2 0.0 2.8 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|33152972|ref|NP_874325.1| - 3.2e-07 29.8 0.0 8e-07 28.5 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|33152972|ref|NP_874325.1| - 3.2e-05 24.2 0.1 0.0001 22.6 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 gi|33152972|ref|NP_874325.1| - 3.9e-05 23.5 0.2 0.00012 21.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|33152972|ref|NP_874325.1| - 0.00075 19.7 0.0 0.0018 18.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|33152972|ref|NP_874325.1| - 0.0011 18.5 0.5 0.0051 16.4 0.5 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_31 PF13614.6 gi|33152972|ref|NP_874325.1| - 0.0022 17.9 0.5 0.0022 17.9 0.5 2.5 3 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|33152972|ref|NP_874325.1| - 0.0031 17.9 0.0 0.0078 16.6 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AIP3 PF03915.13 gi|33152972|ref|NP_874325.1| - 0.0048 16.1 1.2 0.0096 15.1 1.2 1.4 1 0 0 1 1 1 1 Actin interacting protein 3 Helicase_RecD PF05127.14 gi|33152972|ref|NP_874325.1| - 0.0068 16.3 0.1 0.014 15.2 0.1 1.5 1 0 0 1 1 1 1 Helicase APS_kinase PF01583.20 gi|33152972|ref|NP_874325.1| - 0.016 15.1 0.0 0.055 13.4 0.0 1.9 1 0 0 1 1 1 0 Adenylylsulphate kinase TPP_enzyme_M PF00205.22 gi|33152972|ref|NP_874325.1| - 0.017 14.9 0.1 0.14 11.9 0.0 2.4 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain AAA_24 PF13479.6 gi|33152972|ref|NP_874325.1| - 0.02 14.6 0.0 0.057 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|33152972|ref|NP_874325.1| - 0.027 13.5 0.0 0.06 12.4 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|33152972|ref|NP_874325.1| - 0.029 14.3 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 gi|33152972|ref|NP_874325.1| - 0.03 14.3 0.3 0.25 11.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|33152972|ref|NP_874325.1| - 0.037 14.3 0.1 0.32 11.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|33152972|ref|NP_874325.1| - 0.047 13.5 0.1 0.32 10.7 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|33152972|ref|NP_874325.1| - 0.048 13.2 2.7 0.34 10.4 2.7 2.3 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain 6PF2K PF01591.18 gi|33152972|ref|NP_874325.1| - 0.054 12.8 0.0 0.1 11.8 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Thymidylate_kin PF02223.17 gi|33152972|ref|NP_874325.1| - 0.062 13.0 0.2 0.18 11.5 0.2 1.8 1 0 0 1 1 1 0 Thymidylate kinase Rad17 PF03215.15 gi|33152972|ref|NP_874325.1| - 0.068 13.1 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 Rad17 P-loop domain ResIII PF04851.15 gi|33152972|ref|NP_874325.1| - 0.11 12.5 2.4 1.7 8.6 0.2 2.7 2 1 1 3 3 2 0 Type III restriction enzyme, res subunit KTI12 PF08433.10 gi|33152972|ref|NP_874325.1| - 0.13 11.7 1.4 0.19 11.1 0.1 1.9 2 0 0 2 2 2 0 Chromatin associated protein KTI12 ArsA_ATPase PF02374.15 gi|33152972|ref|NP_874325.1| - 6.1 5.9 15.9 0.14 11.3 0.2 3.9 3 1 1 4 4 4 0 Anion-transporting ATPase Mltc_N PF11873.8 gi|33152973|ref|NP_874326.1| - 9.9e-61 204.2 0.1 1.5e-60 203.6 0.1 1.2 1 0 0 1 1 1 1 Membrane-bound lytic murein transglycosylase C, N-terminal domain SLT PF01464.20 gi|33152973|ref|NP_874326.1| - 9.6e-28 96.2 0.0 1.8e-27 95.3 0.0 1.5 1 0 0 1 1 1 1 Transglycosylase SLT domain SLT_2 PF13406.6 gi|33152973|ref|NP_874326.1| - 0.05 12.8 0.1 0.19 10.9 0.1 1.9 1 1 1 2 2 2 0 Transglycosylase SLT domain Lysozyme_like PF13702.6 gi|33152973|ref|NP_874326.1| - 0.051 13.3 1.4 0.59 9.8 0.2 2.6 2 1 0 2 2 2 0 Lysozyme-like Glucosaminidase PF01832.20 gi|33152973|ref|NP_874326.1| - 0.18 12.3 0.4 0.36 11.4 0.1 1.8 2 1 0 2 2 2 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Iron_traffic PF04362.14 gi|33152974|ref|NP_874327.1| - 9.1e-42 140.7 0.3 1e-41 140.5 0.3 1.0 1 0 0 1 1 1 1 Bacterial Fe(2+) trafficking DUF5412 PF17428.2 gi|33152974|ref|NP_874327.1| - 0.083 12.7 0.2 0.12 12.2 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5412) NMD3 PF04981.13 gi|33152974|ref|NP_874327.1| - 0.098 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 NMD3 family Ribosomal_L9_C PF03948.14 gi|33152974|ref|NP_874327.1| - 0.14 12.7 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain HhH-GPD PF00730.25 gi|33152975|ref|NP_874328.1| - 1.3e-19 70.7 0.0 2.3e-19 69.9 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein NUDIX_4 PF14815.6 gi|33152975|ref|NP_874328.1| - 1.1e-18 67.2 0.0 2.2e-18 66.2 0.0 1.5 1 0 0 1 1 1 1 NUDIX domain HHH PF00633.23 gi|33152975|ref|NP_874328.1| - 0.00011 21.8 0.0 0.00024 20.8 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|33152975|ref|NP_874328.1| - 0.012 16.2 0.0 0.17 12.5 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix domain Proteasome PF00227.26 gi|33152976|ref|NP_874329.1| - 2e-23 82.8 0.4 3.7e-23 82.0 0.4 1.4 1 1 0 1 1 1 1 Proteasome subunit AAA_2 PF07724.14 gi|33152977|ref|NP_874330.1| - 9.8e-51 172.3 3.5 1.1e-42 146.1 0.3 2.8 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 gi|33152977|ref|NP_874330.1| - 3.4e-17 63.1 0.6 1.9e-07 31.6 0.1 2.9 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|33152977|ref|NP_874330.1| - 9.9e-08 32.1 0.2 2.5e-05 24.3 0.0 3.0 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|33152977|ref|NP_874330.1| - 6.5e-07 29.7 0.2 0.00028 21.2 0.0 2.9 3 0 0 3 3 3 1 AAA domain MCM PF00493.23 gi|33152977|ref|NP_874330.1| - 1.9e-06 27.2 1.0 0.00099 18.3 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain ClpB_D2-small PF10431.9 gi|33152977|ref|NP_874330.1| - 1.1e-05 25.4 1.5 3.5e-05 23.8 0.1 2.6 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein Mg_chelatase PF01078.21 gi|33152977|ref|NP_874330.1| - 4.6e-05 22.9 0.9 0.0036 16.7 0.0 3.4 3 1 1 4 4 4 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|33152977|ref|NP_874330.1| - 8.2e-05 23.0 0.5 0.00032 21.1 0.2 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 gi|33152977|ref|NP_874330.1| - 0.00043 20.8 0.3 0.008 16.7 0.0 2.7 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|33152977|ref|NP_874330.1| - 0.0005 19.8 0.2 0.11 12.2 0.0 2.6 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|33152977|ref|NP_874330.1| - 0.0014 18.4 0.0 0.019 14.7 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain TniB PF05621.11 gi|33152977|ref|NP_874330.1| - 0.0027 17.2 0.2 0.028 13.8 0.0 2.4 2 0 0 2 2 2 1 Bacterial TniB protein NTPase_1 PF03266.15 gi|33152977|ref|NP_874330.1| - 0.0044 17.0 0.3 0.41 10.5 0.0 2.4 2 0 0 2 2 2 1 NTPase AAA_33 PF13671.6 gi|33152977|ref|NP_874330.1| - 0.0046 17.1 0.0 0.011 15.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 gi|33152977|ref|NP_874330.1| - 0.0048 16.9 0.0 0.1 12.6 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|33152977|ref|NP_874330.1| - 0.0061 15.9 0.2 0.04 13.2 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin IstB_IS21 PF01695.17 gi|33152977|ref|NP_874330.1| - 0.012 15.3 0.0 0.032 14.0 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein CPT PF07931.12 gi|33152977|ref|NP_874330.1| - 0.013 15.3 0.0 0.64 9.8 0.0 2.5 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein DUF4504 PF14953.6 gi|33152977|ref|NP_874330.1| - 0.015 14.7 0.3 0.066 12.6 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4504) AAA_28 PF13521.6 gi|33152977|ref|NP_874330.1| - 0.019 15.2 0.2 0.12 12.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|33152977|ref|NP_874330.1| - 0.02 14.6 0.1 0.18 11.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|33152977|ref|NP_874330.1| - 0.021 14.8 0.0 0.051 13.5 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|33152977|ref|NP_874330.1| - 0.022 15.3 0.2 0.11 13.0 0.2 2.2 1 1 0 1 1 1 0 ABC transporter ResIII PF04851.15 gi|33152977|ref|NP_874330.1| - 0.038 14.0 0.3 0.73 9.8 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|33152977|ref|NP_874330.1| - 0.04 13.7 1.1 1.2 8.8 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase AAA_7 PF12775.7 gi|33152977|ref|NP_874330.1| - 0.043 13.3 0.0 0.14 11.7 0.0 1.8 2 0 0 2 2 1 0 P-loop containing dynein motor region AAA_3 PF07726.11 gi|33152977|ref|NP_874330.1| - 0.056 13.3 0.1 3.7 7.4 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF3802 PF12290.8 gi|33152977|ref|NP_874330.1| - 0.089 13.3 1.6 2.2 8.9 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3802) ATP-synt_ab PF00006.25 gi|33152977|ref|NP_874330.1| - 0.12 12.1 0.1 0.24 11.0 0.1 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 gi|33152977|ref|NP_874330.1| - 0.14 12.1 0.2 1.6 8.6 0.0 2.5 2 1 0 2 2 2 0 NACHT domain RNA_helicase PF00910.22 gi|33152977|ref|NP_874330.1| - 0.15 12.5 0.0 0.79 10.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_6 PF12774.7 gi|33152977|ref|NP_874330.1| - 0.56 9.1 2.5 2.2 7.2 0.0 2.2 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region AAA_19 PF13245.6 gi|33152977|ref|NP_874330.1| - 3.5 7.9 8.0 4.6 7.6 4.7 2.6 2 1 0 2 2 2 0 AAA domain DUF417 PF04224.12 gi|33152978|ref|NP_874331.1| - 1.5e-28 99.6 13.8 2.9e-26 92.1 13.8 2.3 1 1 0 1 1 1 1 Protein of unknown function, DUF417 DoxX PF07681.12 gi|33152978|ref|NP_874331.1| - 0.041 14.5 6.2 0.08 13.5 6.2 1.4 1 0 0 1 1 1 0 DoxX TMEMspv1-c74-12 PF11044.8 gi|33152978|ref|NP_874331.1| - 0.13 12.2 3.5 0.3 11.1 3.5 1.6 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Radical_SAM PF04055.21 gi|33152979|ref|NP_874332.1| - 5.3e-15 56.2 0.0 7.4e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 gi|33152979|ref|NP_874332.1| - 3.5e-06 27.4 0.1 6.4e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family BPL_LplA_LipB PF03099.19 gi|33152980|ref|NP_874333.1| - 1.5e-06 28.2 0.0 3.4e-06 27.0 0.0 1.6 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family DUF493 PF04359.14 gi|33152982|ref|NP_874335.1| - 7.7e-24 84.1 0.0 8.8e-24 83.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF493) DrsE_2 PF13686.6 gi|33152982|ref|NP_874335.1| - 0.026 14.4 0.0 0.087 12.7 0.0 1.7 2 0 0 2 2 2 0 DsrE/DsrF/DrsH-like family Peptidase_S11 PF00768.20 gi|33152983|ref|NP_874336.1| - 3.9e-96 321.2 1.4 5.4e-96 320.7 1.4 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 gi|33152983|ref|NP_874336.1| - 1e-23 83.4 1.9 2.1e-23 82.3 1.9 1.6 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 gi|33152983|ref|NP_874336.1| - 1.9e-10 40.7 0.1 2.8e-10 40.1 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family DPBB_1 PF03330.18 gi|33152984|ref|NP_874337.1| - 5.2e-24 84.3 0.0 7.9e-24 83.7 0.0 1.3 1 0 0 1 1 1 1 Lytic transglycolase DnaGprimase_HBD PF16730.5 gi|33152984|ref|NP_874337.1| - 0.02 15.0 0.3 0.15 12.2 0.1 2.0 2 0 0 2 2 2 0 DnaG-primase C-terminal, helicase-binding domain DUF5065 PF16723.5 gi|33152984|ref|NP_874337.1| - 0.033 14.3 0.2 0.049 13.7 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5065) FTSW_RODA_SPOVE PF01098.19 gi|33152985|ref|NP_874338.1| - 5.4e-118 394.1 27.3 6.7e-118 393.8 27.3 1.0 1 0 0 1 1 1 1 Cell cycle protein Transpeptidase PF00905.22 gi|33152986|ref|NP_874339.1| - 2.2e-84 283.3 0.7 2.9e-84 282.9 0.7 1.2 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 gi|33152986|ref|NP_874339.1| - 1.9e-45 155.4 1.2 3.5e-45 154.6 1.2 1.5 1 0 0 1 1 1 1 Penicillin-binding Protein dimerisation domain RELT PF12606.8 gi|33152986|ref|NP_874339.1| - 0.0015 17.5 0.5 0.0034 16.4 0.5 1.5 1 0 0 1 1 1 1 Tumour necrosis factor receptor superfamily member 19 SPOUT_MTase PF02590.17 gi|33152987|ref|NP_874340.1| - 2.5e-47 160.7 0.0 2.8e-47 160.5 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase MAD PF05557.13 gi|33152987|ref|NP_874340.1| - 0.24 9.7 0.0 0.27 9.6 0.0 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein RsfS PF02410.15 gi|33152988|ref|NP_874341.1| - 8.4e-26 90.3 0.2 9.5e-26 90.1 0.2 1.0 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation HupF_HypC PF01455.18 gi|33152988|ref|NP_874341.1| - 0.098 12.8 1.0 0.25 11.5 0.5 1.9 1 1 1 2 2 2 0 HupF/HypC family Ribosomal_L17 PF01196.19 gi|33152988|ref|NP_874341.1| - 0.11 13.4 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L17 MutS_V PF00488.21 gi|33152989|ref|NP_874342.1| - 9.9e-87 289.8 1.8 1.3e-86 289.4 0.8 1.7 2 0 0 2 2 2 1 MutS domain V MutS_I PF01624.20 gi|33152989|ref|NP_874342.1| - 3.1e-41 140.2 0.0 9.5e-41 138.6 0.0 1.9 2 0 0 2 2 2 1 MutS domain I MutS_III PF05192.18 gi|33152989|ref|NP_874342.1| - 7.8e-41 140.4 2.3 1.5e-40 139.5 2.3 1.5 1 0 0 1 1 1 1 MutS domain III MutS_II PF05188.17 gi|33152989|ref|NP_874342.1| - 5.4e-29 101.2 0.0 1.2e-28 100.0 0.0 1.7 1 0 0 1 1 1 1 MutS domain II MutS_IV PF05190.18 gi|33152989|ref|NP_874342.1| - 3e-27 94.8 0.1 9e-27 93.3 0.1 1.9 1 0 0 1 1 1 1 MutS family domain IV SIX1_SD PF16878.5 gi|33152989|ref|NP_874342.1| - 0.013 16.0 0.3 2.1 8.9 0.0 3.1 2 1 0 2 2 2 0 Transcriptional regulator, SIX1, N-terminal SD domain TonB_dep_Rec PF00593.24 gi|33152990|ref|NP_874343.1| - 1.1e-57 196.9 19.5 1.1e-57 196.9 19.5 2.8 2 1 0 2 2 2 1 TonB dependent receptor Plug PF07715.15 gi|33152990|ref|NP_874343.1| - 1.9e-14 54.1 2.1 4.9e-14 52.8 2.1 1.7 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain Ephrin_lbd PF01404.19 gi|33152990|ref|NP_874343.1| - 0.05 13.6 1.6 0.07 13.2 0.1 2.0 2 0 0 2 2 2 0 Ephrin receptor ligand binding domain CCDC106 PF15794.5 gi|33152990|ref|NP_874343.1| - 0.086 12.5 0.2 0.17 11.6 0.2 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 MscL PF01741.18 gi|33152991|ref|NP_874344.1| - 3.3e-45 153.3 1.1 3.7e-45 153.1 1.1 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL UPF0239 PF06783.11 gi|33152991|ref|NP_874344.1| - 0.14 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF3487 PF11990.8 gi|33152991|ref|NP_874344.1| - 0.41 10.5 3.2 31 4.5 0.2 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3487) TrkH PF02386.16 gi|33152992|ref|NP_874345.1| - 9.5e-86 288.2 21.3 1.7e-85 287.4 21.3 1.3 1 1 0 1 1 1 1 Cation transport protein Formyl_trans_N PF00551.19 gi|33152993|ref|NP_874346.1| - 2.1e-51 174.2 0.0 3e-51 173.7 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 gi|33152993|ref|NP_874346.1| - 3e-26 91.6 0.0 5.4e-26 90.7 0.0 1.4 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain VipB PF05943.12 gi|33152993|ref|NP_874346.1| - 0.032 13.0 0.0 0.045 12.6 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Sigma70_r4 PF04545.16 gi|33152994|ref|NP_874347.1| - 6.6e-07 28.7 0.9 3.2e-06 26.5 0.9 2.2 1 0 0 1 1 1 1 Sigma-70, region 4 RNA_pol_A_CTD PF03118.15 gi|33152994|ref|NP_874347.1| - 0.0016 18.1 0.0 0.04 13.7 0.0 3.1 3 0 0 3 3 3 1 Bacterial RNA polymerase, alpha chain C terminal domain DUF4447 PF14590.6 gi|33152994|ref|NP_874347.1| - 0.11 12.3 0.2 0.5 10.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4447) ABC_tran PF00005.27 gi|33152995|ref|NP_874348.1| - 8.8e-35 120.2 0.0 1.5e-34 119.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|33152995|ref|NP_874348.1| - 3.4e-12 46.8 0.0 6.4e-06 26.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|33152995|ref|NP_874348.1| - 1.1e-09 38.0 0.6 1.2e-06 28.2 0.1 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|33152995|ref|NP_874348.1| - 4e-05 24.2 0.1 6.5e-05 23.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|33152995|ref|NP_874348.1| - 6.5e-05 22.6 0.0 0.00013 21.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|33152995|ref|NP_874348.1| - 7.2e-05 23.1 0.1 0.00052 20.3 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|33152995|ref|NP_874348.1| - 0.00011 22.6 0.5 0.00049 20.5 0.5 2.0 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|33152995|ref|NP_874348.1| - 0.00025 20.0 0.4 0.32 9.7 0.1 3.0 2 2 0 2 2 2 2 Predicted ATPase of the ABC class AAA_13 PF13166.6 gi|33152995|ref|NP_874348.1| - 0.00097 17.9 0.0 0.39 9.3 0.0 2.0 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|33152995|ref|NP_874348.1| - 0.0012 18.6 0.1 0.005 16.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|33152995|ref|NP_874348.1| - 0.0019 18.2 0.0 0.0037 17.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_14 PF13173.6 gi|33152995|ref|NP_874348.1| - 0.0056 16.7 0.0 0.027 14.5 0.0 2.0 2 1 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|33152995|ref|NP_874348.1| - 0.0065 16.4 0.0 0.013 15.4 0.0 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_28 PF13521.6 gi|33152995|ref|NP_874348.1| - 0.0065 16.7 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|33152995|ref|NP_874348.1| - 0.0068 16.1 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|33152995|ref|NP_874348.1| - 0.0099 16.0 0.0 0.036 14.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|33152995|ref|NP_874348.1| - 0.01 15.8 0.0 0.022 14.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_15 PF13175.6 gi|33152995|ref|NP_874348.1| - 0.012 15.3 0.0 1.3 8.6 0.0 2.1 1 1 0 2 2 2 0 AAA ATPase domain cobW PF02492.19 gi|33152995|ref|NP_874348.1| - 0.017 14.7 0.1 0.041 13.5 0.1 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|33152995|ref|NP_874348.1| - 0.018 15.6 0.0 0.047 14.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|33152995|ref|NP_874348.1| - 0.019 14.0 0.1 0.044 12.8 0.1 1.6 1 1 0 1 1 1 0 Type II/IV secretion system protein AAA_25 PF13481.6 gi|33152995|ref|NP_874348.1| - 0.027 14.1 0.1 0.073 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|33152995|ref|NP_874348.1| - 0.028 14.2 0.0 0.068 12.9 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_19 PF13245.6 gi|33152995|ref|NP_874348.1| - 0.03 14.7 0.4 0.047 14.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|33152995|ref|NP_874348.1| - 0.037 13.5 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein Mg_chelatase PF01078.21 gi|33152995|ref|NP_874348.1| - 0.044 13.2 0.0 0.11 11.9 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.20 gi|33152995|ref|NP_874348.1| - 0.057 12.6 0.0 0.061 12.5 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit PduV-EutP PF10662.9 gi|33152995|ref|NP_874348.1| - 0.058 13.1 0.0 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Rad17 PF03215.15 gi|33152995|ref|NP_874348.1| - 0.07 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain Adeno_IVa2 PF02456.15 gi|33152995|ref|NP_874348.1| - 0.094 11.5 0.1 0.27 10.0 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_27 PF13514.6 gi|33152995|ref|NP_874348.1| - 0.1 12.2 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RecA PF00154.21 gi|33152995|ref|NP_874348.1| - 0.1 12.0 0.0 0.37 10.2 0.0 1.9 1 1 1 2 2 2 0 recA bacterial DNA recombination protein SbcCD_C PF13558.6 gi|33152995|ref|NP_874348.1| - 0.11 12.8 0.4 0.69 10.2 0.4 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DLIC PF05783.11 gi|33152995|ref|NP_874348.1| - 0.12 11.1 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) MMR_HSR1 PF01926.23 gi|33152995|ref|NP_874348.1| - 0.13 12.4 0.0 0.23 11.5 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRPRB PF09439.10 gi|33152995|ref|NP_874348.1| - 0.14 11.6 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit BPD_transp_1 PF00528.22 gi|33152996|ref|NP_874349.1| - 1.5e-22 80.2 11.5 1.5e-22 80.2 11.5 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PsbJ PF01788.17 gi|33152996|ref|NP_874349.1| - 0.27 11.1 7.7 3.2 7.7 0.1 2.6 2 0 0 2 2 2 0 PsbJ LapA_dom PF06305.11 gi|33152996|ref|NP_874349.1| - 1.7 8.5 6.1 3.3 7.6 3.4 2.5 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF5363 PF17320.2 gi|33152997|ref|NP_874350.1| - 0.075 12.9 0.4 0.1 12.5 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5363) SBP_bac_3 PF00497.20 gi|33152998|ref|NP_874351.1| - 1.6e-53 181.5 1.0 1.9e-53 181.2 1.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|33152998|ref|NP_874351.1| - 0.006 16.8 0.0 0.042 14.1 0.0 2.3 2 1 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site SUB1_ProdP9 PF18213.1 gi|33152998|ref|NP_874351.1| - 0.13 12.1 0.0 18 5.2 0.0 2.3 2 0 0 2 2 2 0 SUB1 protease Prodomain ProdP9 OMP_b-brl PF13505.6 gi|33152999|ref|NP_874352.1| - 0.011 15.9 9.2 0.018 15.2 9.2 1.4 1 1 0 1 1 1 0 Outer membrane protein beta-barrel domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Haemophilus_ducreyi_35000HP_uid57625/NC_002940.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Haemophilus_ducreyi_35000HP_uid57625/NC_002940.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Haemophilus_ducreyi_35000HP_uid57625/NC_002940.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Haemophilus_ducreyi_35000HP_uid57625/NC_002940.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 02:36:00 2019 # [ok]