#                                                                        --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                    accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------          -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Rieske	PF00355.21	gi|118575214|ref|YP_874957.1|	-	1e-07	31.4	0.0	1.6e-07	30.8	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
TAT_signal	PF10518.4	gi|118575214|ref|YP_874957.1|	-	0.00099	18.9	0.9	0.0018	18.1	0.6	1.5	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
UCR_Fe-S_N	PF10399.4	gi|118575214|ref|YP_874957.1|	-	0.0016	17.5	0.0	0.0036	16.4	0.0	1.5	1	0	0	1	1	1	1	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
Cytochrom_B_N_2	PF13631.1	gi|118575215|ref|YP_874958.1|	-	5.1e-25	88.1	8.9	5.1e-25	88.1	6.2	3.1	2	1	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|118575215|ref|YP_874958.1|	-	1.2e-08	35.1	1.5	1.2e-08	35.1	1.0	3.2	3	0	0	3	3	3	1	Cytochrome	b(C-terminal)/b6/petD
DUF4405	PF14358.1	gi|118575215|ref|YP_874958.1|	-	0.0074	16.3	1.6	0.0074	16.3	1.1	4.2	5	0	0	5	5	5	1	Domain	of	unknown	function	(DUF4405)
Copper-bind	PF00127.15	gi|118575216|ref|YP_874959.1|	-	2.3e-07	30.9	0.0	3.3e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|118575216|ref|YP_874959.1|	-	0.00042	20.1	0.0	0.00089	19.1	0.0	1.6	2	0	0	2	2	2	1	Cupredoxin-like	domain
Lactamase_B_2	PF12706.2	gi|118575218|ref|YP_874961.1|	-	9.2e-14	51.4	0.1	1.8e-13	50.5	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|118575218|ref|YP_874961.1|	-	5.8e-08	32.6	0.2	6e-07	29.3	0.0	2.3	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|118575218|ref|YP_874961.1|	-	3.9e-06	26.6	0.0	8.8e-06	25.5	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|118575218|ref|YP_874961.1|	-	0.00032	20.4	0.1	0.00076	19.2	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Prefoldin_2	PF01920.15	gi|118575219|ref|YP_874962.1|	-	8.3e-22	76.9	18.8	1e-21	76.6	13.1	1.1	1	0	0	1	1	1	1	Prefoldin	subunit
Myosin_tail_1	PF01576.14	gi|118575219|ref|YP_874962.1|	-	4e-05	21.5	13.6	5e-05	21.2	9.5	1.0	1	0	0	1	1	1	1	Myosin	tail
DUF1845	PF08900.6	gi|118575219|ref|YP_874962.1|	-	0.00036	19.9	0.3	1	8.5	0.0	3.0	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF1845)
Tropomyosin_1	PF12718.2	gi|118575219|ref|YP_874962.1|	-	0.051	13.4	12.7	0.59	9.9	1.2	2.1	2	0	0	2	2	2	0	Tropomyosin	like
TPR_MLP1_2	PF07926.7	gi|118575219|ref|YP_874962.1|	-	0.19	11.4	16.5	0.55	9.9	1.7	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
Macoilin	PF09726.4	gi|118575219|ref|YP_874962.1|	-	0.45	8.7	8.5	0.54	8.4	5.9	1.0	1	0	0	1	1	1	0	Transmembrane	protein
GAS	PF13851.1	gi|118575219|ref|YP_874962.1|	-	0.6	9.2	17.2	3.3	6.8	11.9	1.8	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF4140	PF13600.1	gi|118575219|ref|YP_874962.1|	-	0.71	10.3	5.1	5	7.6	0.3	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF3287	PF11690.3	gi|118575219|ref|YP_874962.1|	-	1	9.4	4.5	2	8.5	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3287)
AF0941-like	PF14591.1	gi|118575219|ref|YP_874962.1|	-	1	9.4	9.2	0.26	11.3	1.2	2.2	1	1	1	2	2	2	0	AF0941-like
Prefoldin	PF02996.12	gi|118575219|ref|YP_874962.1|	-	1.5	8.4	14.9	2.2	7.9	2.6	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
Nup54	PF13874.1	gi|118575219|ref|YP_874962.1|	-	2.6	7.6	12.3	0.98	9.0	1.3	2.1	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
IncA	PF04156.9	gi|118575219|ref|YP_874962.1|	-	3.9	7.0	15.8	6.3	6.3	11.0	1.3	1	1	0	1	1	1	0	IncA	protein
Cauli_AT	PF03233.8	gi|118575219|ref|YP_874962.1|	-	4.9	6.8	10.2	4.2	7.0	0.5	2.1	1	1	1	2	2	2	0	Aphid	transmission	protein
DUF4200	PF13863.1	gi|118575219|ref|YP_874962.1|	-	5.2	7.0	15.8	6.2	6.7	3.7	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
DUF2203	PF09969.4	gi|118575219|ref|YP_874962.1|	-	6	7.1	8.8	1.1e+02	3.0	6.1	2.1	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
Suppressor_APC	PF11414.3	gi|118575219|ref|YP_874962.1|	-	8	6.3	12.8	11	5.9	0.2	2.5	2	1	0	2	2	2	0	Adenomatous	polyposis	coli	tumour	suppressor	protein
BLOC1_2	PF10046.4	gi|118575219|ref|YP_874962.1|	-	8.4	6.6	11.1	17	5.6	0.5	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
FlaC_arch	PF05377.6	gi|118575220|ref|YP_874963.1|	-	0.0008	19.2	3.5	4.3	7.3	0.0	3.4	3	0	0	3	3	3	2	Flagella	accessory	protein	C	(FlaC)
Syntaxin	PF00804.20	gi|118575220|ref|YP_874963.1|	-	0.0022	18.1	3.3	0.99	9.6	0.1	2.5	2	0	0	2	2	2	2	Syntaxin
COG5	PF10392.4	gi|118575220|ref|YP_874963.1|	-	0.0038	17.1	0.2	26	4.7	0.1	3.3	3	0	0	3	3	3	0	Golgi	transport	complex	subunit	5
Fib_alpha	PF08702.5	gi|118575220|ref|YP_874963.1|	-	0.0058	16.7	0.8	0.53	10.4	0.0	2.3	2	0	0	2	2	2	1	Fibrinogen	alpha/beta	chain	family
Tropomyosin_1	PF12718.2	gi|118575220|ref|YP_874963.1|	-	0.011	15.6	6.3	0.012	15.5	0.1	2.4	2	0	0	2	2	2	0	Tropomyosin	like
XhlA	PF10779.4	gi|118575220|ref|YP_874963.1|	-	0.017	15.0	8.5	0.018	14.9	0.8	2.6	2	0	0	2	2	2	0	Haemolysin	XhlA
TMF_DNA_bd	PF12329.3	gi|118575220|ref|YP_874963.1|	-	0.025	14.3	4.6	0.17	11.7	0.2	2.8	3	0	0	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Peptidase_M10	PF00413.19	gi|118575220|ref|YP_874963.1|	-	0.031	14.0	1.3	0.31	10.7	0.9	2.3	1	1	0	1	1	1	0	Matrixin
Reo_sigmaC	PF04582.7	gi|118575220|ref|YP_874963.1|	-	0.051	12.7	0.0	7.8	5.5	0.0	2.4	2	1	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
DUF869	PF05911.6	gi|118575220|ref|YP_874963.1|	-	0.051	11.8	2.7	0.2	9.8	0.1	2.0	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF869)
Peptidase_M43	PF05572.8	gi|118575220|ref|YP_874963.1|	-	0.055	13.0	1.1	0.14	11.7	0.2	2.0	2	0	0	2	2	2	0	Pregnancy-associated	plasma	protein-A
Baculo_PEP_C	PF04513.7	gi|118575220|ref|YP_874963.1|	-	0.11	12.2	0.5	6	6.6	0.1	2.7	3	0	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
EMP24_GP25L	PF01105.19	gi|118575220|ref|YP_874963.1|	-	0.13	12.0	1.9	2	8.0	0.0	2.7	2	0	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
APG6	PF04111.7	gi|118575220|ref|YP_874963.1|	-	0.16	10.9	10.4	5.3	5.9	1.6	3.1	3	0	0	3	3	3	0	Autophagy	protein	Apg6
Syntaxin-6_N	PF09177.6	gi|118575220|ref|YP_874963.1|	-	0.17	12.2	2.7	5.9	7.3	0.2	2.4	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
DUF1664	PF07889.7	gi|118575220|ref|YP_874963.1|	-	0.18	11.5	4.6	0.82	9.4	1.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
SlyX	PF04102.7	gi|118575220|ref|YP_874963.1|	-	0.42	11.0	4.7	2.2	8.6	0.4	2.9	2	0	0	2	2	2	0	SlyX
V_ATPase_I	PF01496.14	gi|118575220|ref|YP_874963.1|	-	0.51	8.1	2.0	6.4	4.5	0.0	2.1	2	0	0	2	2	2	0	V-type	ATPase	116kDa	subunit	family
DUF972	PF06156.8	gi|118575220|ref|YP_874963.1|	-	0.62	10.4	8.0	7.4	6.9	0.5	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF972)
Mnd1	PF03962.10	gi|118575220|ref|YP_874963.1|	-	0.67	9.5	7.6	7.1	6.2	0.2	3.2	3	1	0	3	3	3	0	Mnd1	family
Cep57_MT_bd	PF06657.8	gi|118575220|ref|YP_874963.1|	-	1.1	9.1	8.8	7.4	6.5	1.2	3.4	4	0	0	4	4	3	0	Centrosome	microtubule-binding	domain	of	Cep57
Spc7	PF08317.6	gi|118575220|ref|YP_874963.1|	-	1.2	7.7	10.6	2.6	6.6	0.9	3.3	3	1	1	4	4	4	0	Spc7	kinetochore	protein
IncA	PF04156.9	gi|118575220|ref|YP_874963.1|	-	1.6	8.3	13.2	0.048	13.2	0.3	3.1	3	1	1	4	4	4	0	IncA	protein
DUF4140	PF13600.1	gi|118575220|ref|YP_874963.1|	-	1.7	9.1	7.5	22	5.5	0.1	3.8	4	1	0	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
BLOC1_2	PF10046.4	gi|118575220|ref|YP_874963.1|	-	2.6	8.2	8.0	1.9	8.6	0.3	3.4	3	1	0	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Flagellin_C	PF00700.16	gi|118575220|ref|YP_874963.1|	-	3.5	7.8	7.2	2.5	8.3	0.2	3.1	3	1	1	4	4	3	0	Bacterial	flagellin	C-terminal	helical	region
CCDC155	PF14662.1	gi|118575220|ref|YP_874963.1|	-	4	7.0	11.7	0.9	9.1	0.1	3.4	4	0	0	4	4	4	0	Coiled-coil	region	of	CCDC155
DivIVA	PF05103.8	gi|118575220|ref|YP_874963.1|	-	7.8	6.5	7.7	21	5.1	0.1	3.1	2	1	1	3	3	3	0	DivIVA	protein
Ammonium_transp	PF00909.16	gi|118575221|ref|YP_874964.1|	-	0.09	11.2	12.3	0.019	13.4	5.8	1.9	1	1	1	2	2	2	0	Ammonium	Transporter	Family
Bacteriocin_IIc	PF10439.4	gi|118575221|ref|YP_874964.1|	-	1.5	8.9	4.3	1	9.5	0.6	2.2	3	0	0	3	3	3	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
FtsX	PF02687.16	gi|118575221|ref|YP_874964.1|	-	5.1	6.8	10.8	0.12	12.1	2.1	2.1	2	1	0	2	2	2	0	FtsX-like	permease	family
DUF1129	PF06570.6	gi|118575221|ref|YP_874964.1|	-	7.1	5.8	6.8	0.81	8.9	1.4	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
ERCC4	PF02732.10	gi|118575222|ref|YP_874965.1|	-	2.3e-26	92.2	0.0	3.2e-26	91.7	0.0	1.2	1	0	0	1	1	1	1	ERCC4	domain
HHH	PF00633.18	gi|118575222|ref|YP_874965.1|	-	4.4e-07	29.2	0.0	0.03	14.0	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|118575222|ref|YP_874965.1|	-	5.6e-06	26.4	0.0	1.8e-05	24.8	0.0	1.8	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
IMS_HHH	PF11798.3	gi|118575222|ref|YP_874965.1|	-	1.2e-05	25.1	0.1	0.018	15.0	0.0	2.9	2	0	0	2	2	2	2	IMS	family	HHH	motif
HHH_3	PF12836.2	gi|118575222|ref|YP_874965.1|	-	2.2e-05	24.2	0.2	0.021	14.7	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_2	PF12826.2	gi|118575222|ref|YP_874965.1|	-	3.6e-05	23.5	0.0	9.3e-05	22.2	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|118575222|ref|YP_874965.1|	-	0.00017	21.7	0.0	0.16	12.1	0.0	2.4	1	1	1	2	2	2	2	Helix-hairpin-helix	domain
Transposase_20	PF02371.11	gi|118575222|ref|YP_874965.1|	-	0.029	14.4	0.0	0.053	13.6	0.0	1.4	1	0	0	1	1	1	0	Transposase	IS116/IS110/IS902	family
UPF0278	PF08745.6	gi|118575223|ref|YP_874966.1|	-	7.9e-05	21.9	0.1	0.017	14.3	0.1	2.1	2	0	0	2	2	2	2	UPF0278	family
PIN	PF01850.16	gi|118575223|ref|YP_874966.1|	-	0.0012	19.2	0.0	0.0024	18.1	0.0	1.5	1	1	1	2	2	2	1	PIN	domain
zinc-ribbons_6	PF07191.7	gi|118575223|ref|YP_874966.1|	-	0.0082	15.9	0.0	0.014	15.2	0.0	1.2	1	0	0	1	1	1	1	zinc-ribbons
DZR	PF12773.2	gi|118575223|ref|YP_874966.1|	-	0.012	15.4	0.7	0.02	14.7	0.5	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|118575223|ref|YP_874966.1|	-	0.028	14.2	1.3	0.048	13.4	0.9	1.4	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-TFIIB	PF13453.1	gi|118575223|ref|YP_874966.1|	-	0.044	12.9	0.8	7.1	5.9	0.1	2.5	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-NADH-PPase	PF09297.6	gi|118575223|ref|YP_874966.1|	-	0.094	12.2	2.0	5.7	6.5	0.1	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|118575223|ref|YP_874966.1|	-	2.4	8.1	5.4	27	4.8	3.7	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|118575223|ref|YP_874966.1|	-	3	7.1	7.9	11	5.4	5.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118575223|ref|YP_874966.1|	-	5.7	6.5	7.9	0.54	9.8	0.6	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4344	PF14247.1	gi|118575224|ref|YP_874967.1|	-	1.9e-72	243.4	1.0	2.3e-72	243.2	0.7	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4344)
Peptidase_U49	PF10463.4	gi|118575224|ref|YP_874967.1|	-	0.083	12.6	0.1	0.13	11.9	0.0	1.2	1	0	0	1	1	1	0	Peptidase	U49
CTK3	PF12243.3	gi|118575225|ref|YP_874968.1|	-	0.14	11.7	0.1	0.16	11.5	0.0	1.2	1	1	0	1	1	1	0	CTD	kinase	subunit	gamma	CTK3
DUF4344	PF14247.1	gi|118575226|ref|YP_874969.1|	-	3.7e-25	88.8	0.2	4.4e-25	88.6	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4344)
Peptidase_U49	PF10463.4	gi|118575226|ref|YP_874969.1|	-	0.0018	18.0	0.3	0.0029	17.4	0.2	1.4	1	1	0	1	1	1	1	Peptidase	U49
DUF4344	PF14247.1	gi|118575227|ref|YP_874970.1|	-	1.7e-07	31.1	1.3	1.9e-07	30.9	0.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4344)
Radical_SAM	PF04055.16	gi|118575230|ref|YP_874973.1|	-	3e-14	53.5	0.0	9.4e-14	51.9	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|118575230|ref|YP_874973.1|	-	0.0012	18.8	0.0	0.0029	17.6	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
RNase_H	PF00075.19	gi|118575232|ref|YP_874975.1|	-	1.5e-16	60.9	0.0	1.8e-16	60.6	0.0	1.0	1	0	0	1	1	1	1	RNase	H
RVT_3	PF13456.1	gi|118575232|ref|YP_874975.1|	-	9.4e-10	38.1	0.0	1.4e-09	37.6	0.0	1.2	1	0	0	1	1	1	1	Reverse	transcriptase-like
DUF915	PF06028.6	gi|118575232|ref|YP_874975.1|	-	0.061	12.4	0.0	0.065	12.3	0.0	1.1	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
ATP-grasp_5	PF13549.1	gi|118575233|ref|YP_874976.1|	-	7.9e-78	260.6	0.3	1.3e-77	260.0	0.2	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|118575233|ref|YP_874976.1|	-	7.9e-52	174.5	0.8	7.9e-52	174.5	0.6	2.1	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|118575233|ref|YP_874976.1|	-	2.8e-23	82.2	0.0	8.9e-23	80.6	0.0	1.9	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|118575233|ref|YP_874976.1|	-	2.6e-11	43.8	3.9	8.8e-11	42.1	1.1	2.8	2	0	0	2	2	2	1	CoA	binding	domain
ATP-grasp_2	PF08442.5	gi|118575233|ref|YP_874976.1|	-	5.4e-06	25.9	0.3	9.7e-06	25.1	0.2	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118575233|ref|YP_874976.1|	-	0.00019	21.2	0.0	0.00038	20.2	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|118575233|ref|YP_874976.1|	-	0.01	15.1	0.2	0.018	14.3	0.2	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp	PF02222.17	gi|118575233|ref|YP_874976.1|	-	0.044	13.1	0.0	0.12	11.6	0.0	1.7	1	0	0	1	1	1	0	ATP-grasp	domain
Dak1_2	PF13684.1	gi|118575233|ref|YP_874976.1|	-	0.065	12.1	0.8	0.3	9.9	0.0	2.2	2	0	0	2	2	2	0	Dihydroxyacetone	kinase	family
HpaB_N	PF11794.3	gi|118575234|ref|YP_874977.1|	-	8.1e-89	297.5	0.0	3.3e-88	295.5	0.0	1.8	2	0	0	2	2	2	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|118575234|ref|YP_874977.1|	-	1.8e-75	252.2	0.3	2.4e-75	251.8	0.2	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Peptidase_S24	PF00717.18	gi|118575235|ref|YP_874978.1|	-	9.6e-09	34.7	0.4	1.8e-08	33.9	0.3	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
PRC	PF05239.11	gi|118575236|ref|YP_874979.1|	-	1.7e-06	27.7	0.1	3e-06	26.9	0.1	1.4	1	0	0	1	1	1	1	PRC-barrel	domain
DZR	PF12773.2	gi|118575236|ref|YP_874979.1|	-	1.9e-06	27.5	8.3	3.1e-05	23.7	0.5	2.7	2	1	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|118575236|ref|YP_874979.1|	-	4e-05	22.6	6.8	4e-05	22.6	4.7	2.6	3	0	0	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118575236|ref|YP_874979.1|	-	0.00035	19.9	8.2	0.00035	19.9	5.7	2.7	3	0	0	3	3	3	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|118575236|ref|YP_874979.1|	-	0.00079	18.4	2.2	0.00079	18.4	1.5	2.3	3	0	0	3	3	3	1	Zn-finger	in	Ran	binding	protein	and	others
RRN7	PF11781.3	gi|118575236|ref|YP_874979.1|	-	0.036	13.5	6.7	0.7	9.4	0.1	3.1	3	0	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Terminase_GpA	PF05876.7	gi|118575236|ref|YP_874979.1|	-	0.072	11.4	1.4	0.24	9.7	0.4	1.8	1	1	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
PhnA_Zn_Ribbon	PF08274.7	gi|118575236|ref|YP_874979.1|	-	0.54	10.0	9.8	1.6	8.6	0.3	3.7	3	1	0	3	3	3	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.5	gi|118575236|ref|YP_874979.1|	-	0.81	9.2	0.0	0.81	9.2	0.0	3.9	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
GFA	PF04828.9	gi|118575236|ref|YP_874979.1|	-	4.1	7.4	8.5	44	4.1	1.3	3.4	2	1	1	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
Rubredoxin	PF00301.15	gi|118575236|ref|YP_874979.1|	-	9.7	6.1	8.7	29	4.6	0.1	3.6	3	0	0	3	3	3	0	Rubredoxin
Thioredoxin	PF00085.15	gi|118575237|ref|YP_874980.1|	-	9.7e-31	105.5	0.1	1.1e-30	105.3	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|118575237|ref|YP_874980.1|	-	9.3e-12	44.9	0.1	3.6e-09	36.6	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|118575237|ref|YP_874980.1|	-	1.1e-10	41.7	0.0	3.4e-10	40.1	0.0	1.7	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_7	PF13899.1	gi|118575237|ref|YP_874980.1|	-	1.1e-06	28.5	0.0	1.9e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Redoxin	PF08534.5	gi|118575237|ref|YP_874980.1|	-	1.6e-05	24.4	0.2	3.4e-05	23.4	0.1	1.5	1	1	0	1	1	1	1	Redoxin
Thioredoxin_3	PF13192.1	gi|118575237|ref|YP_874980.1|	-	0.00015	21.4	0.0	0.00019	21.1	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_9	PF14595.1	gi|118575237|ref|YP_874980.1|	-	0.00035	20.1	0.0	0.00036	20.0	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
AhpC-TSA	PF00578.16	gi|118575237|ref|YP_874980.1|	-	0.00038	20.1	0.1	0.00064	19.4	0.0	1.4	1	1	0	1	1	1	1	AhpC/TSA	family
HyaE	PF07449.6	gi|118575237|ref|YP_874980.1|	-	0.00056	19.7	0.0	0.00077	19.3	0.0	1.2	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
DUF836	PF05768.9	gi|118575237|ref|YP_874980.1|	-	0.0098	16.1	0.0	0.012	15.8	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
TraF	PF13728.1	gi|118575237|ref|YP_874980.1|	-	0.015	14.7	0.0	0.019	14.4	0.0	1.2	1	0	0	1	1	1	0	F	plasmid	transfer	operon	protein
DUF953	PF06110.6	gi|118575237|ref|YP_874980.1|	-	0.022	14.2	0.2	0.05	13.0	0.1	1.8	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF953)
Thioredoxin_4	PF13462.1	gi|118575237|ref|YP_874980.1|	-	0.048	13.6	0.0	0.15	12.0	0.0	1.7	1	1	1	2	2	2	0	Thioredoxin
Thioredoxin_6	PF13848.1	gi|118575237|ref|YP_874980.1|	-	0.053	13.3	0.0	0.055	13.2	0.0	1.2	1	0	0	1	1	1	0	Thioredoxin-like	domain
zinc_ribbon_2	PF13240.1	gi|118575238|ref|YP_874981.1|	-	7.1e-05	22.1	4.7	0.00012	21.4	3.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|118575238|ref|YP_874981.1|	-	0.0003	20.5	1.6	0.00043	20.0	1.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|118575238|ref|YP_874981.1|	-	0.00056	19.0	5.2	0.00093	18.3	3.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|118575238|ref|YP_874981.1|	-	0.046	13.4	0.4	0.066	12.9	0.3	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Nudix_N_2	PF14803.1	gi|118575238|ref|YP_874981.1|	-	1.1	8.9	5.3	4.9	6.9	0.4	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zf-ribbon_3	PF13248.1	gi|118575239|ref|YP_874982.1|	-	1.2e-05	24.3	5.7	3e-05	23.0	3.8	1.8	1	1	1	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|118575239|ref|YP_874982.1|	-	1.4e-05	24.8	0.6	2.2e-05	24.1	0.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|118575239|ref|YP_874982.1|	-	7.5e-05	22.0	6.3	0.00039	19.7	4.5	2.0	1	1	1	2	2	2	2	zinc-ribbon	domain
UPF0547	PF10571.4	gi|118575239|ref|YP_874982.1|	-	0.00032	20.3	4.5	0.0051	16.4	3.3	2.2	1	1	1	2	2	2	2	Uncharacterised	protein	family	UPF0547
zf-NADH-PPase	PF09297.6	gi|118575239|ref|YP_874982.1|	-	0.00043	19.7	5.7	0.014	14.8	4.0	2.2	1	1	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|118575239|ref|YP_874982.1|	-	0.003	17.2	7.8	0.16	11.6	0.3	3.1	3	0	0	3	3	3	2	Nudix	N-terminal
GFA	PF04828.9	gi|118575239|ref|YP_874982.1|	-	0.061	13.2	3.3	2.3	8.2	0.1	2.8	2	1	1	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
RNA_POL_M_15KD	PF02150.11	gi|118575239|ref|YP_874982.1|	-	0.071	12.8	5.1	1.7	8.3	0.3	2.4	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
A2L_zn_ribbon	PF08792.5	gi|118575239|ref|YP_874982.1|	-	0.12	11.8	3.6	0.8	9.2	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Prok-RING_1	PF14446.1	gi|118575239|ref|YP_874982.1|	-	0.13	11.9	1.1	0.2	11.3	0.8	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
NOB1_Zn_bind	PF08772.6	gi|118575239|ref|YP_874982.1|	-	0.33	10.8	7.5	1.9	8.4	0.5	2.4	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-IS66	PF13005.2	gi|118575239|ref|YP_874982.1|	-	0.47	10.4	5.0	1.3	9.0	0.1	2.3	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Zn-ribbon_8	PF09723.5	gi|118575239|ref|YP_874982.1|	-	3.1	7.8	5.6	11	6.0	0.2	2.3	1	1	1	2	2	2	0	Zinc	ribbon	domain
YhfH	PF14149.1	gi|118575239|ref|YP_874982.1|	-	3.5	7.5	5.5	2.5	7.9	0.4	2.2	1	1	1	2	2	2	0	YhfH-like	protein
zf-tcix	PF14952.1	gi|118575239|ref|YP_874982.1|	-	3.8	6.9	5.0	2.7	7.3	0.3	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2196	PF09962.4	gi|118575240|ref|YP_874983.1|	-	5.4e-28	96.5	1.8	6e-28	96.4	1.3	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2196)
DUF4451	PF14616.1	gi|118575241|ref|YP_874984.1|	-	0.93	9.2	3.7	5.3	6.8	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4451)
zf-DBF	PF07535.7	gi|118575241|ref|YP_874984.1|	-	2.3	7.9	4.6	0.49	10.1	0.8	1.6	2	0	0	2	2	2	0	DBF	zinc	finger
Amidohydro_4	PF13147.1	gi|118575242|ref|YP_874985.1|	-	1.8e-25	90.5	3.2	2.5e-25	90.0	2.2	1.2	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|118575242|ref|YP_874985.1|	-	3.7e-12	45.8	0.6	3.7e-12	45.8	0.4	2.3	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|118575242|ref|YP_874985.1|	-	6.2e-07	29.3	1.1	3.9e-06	26.7	0.8	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|118575242|ref|YP_874985.1|	-	1.3e-06	27.9	10.2	1.3e-06	27.8	1.7	2.6	1	1	1	2	2	2	1	Amidohydrolase	family
Amidohydro_2	PF04909.9	gi|118575242|ref|YP_874985.1|	-	0.00037	20.1	0.3	0.00049	19.7	0.2	1.2	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|118575242|ref|YP_874985.1|	-	0.0072	15.5	0.0	0.034	13.3	0.0	2.0	1	1	0	1	1	1	1	TatD	related	DNase
PP2C	PF00481.16	gi|118575243|ref|YP_874986.1|	-	1.2e-27	96.9	0.1	3.8e-27	95.2	0.1	1.6	1	1	0	1	1	1	1	Protein	phosphatase	2C
PP2C_2	PF13672.1	gi|118575243|ref|YP_874986.1|	-	3.4e-19	69.0	0.1	4.3e-19	68.7	0.0	1.1	1	0	0	1	1	1	1	Protein	phosphatase	2C
SpoIIE	PF07228.7	gi|118575243|ref|YP_874986.1|	-	1.1e-12	48.0	1.5	6e-12	45.6	1.0	1.8	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
Copper-bind	PF00127.15	gi|118575244|ref|YP_874987.1|	-	1e-08	35.3	0.2	2.8e-08	33.8	0.0	1.9	2	1	0	2	2	2	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|118575244|ref|YP_874987.1|	-	0.00016	21.5	0.0	0.0003	20.6	0.0	1.5	1	0	0	1	1	1	1	Cupredoxin-like	domain
Rib_5-P_isom_A	PF06026.9	gi|118575245|ref|YP_874988.1|	-	7.2e-47	158.9	0.0	8.8e-47	158.6	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|118575245|ref|YP_874988.1|	-	4e-07	29.8	0.1	0.014	15.0	0.0	2.2	2	0	0	2	2	2	2	DeoR	C	terminal	sensor	domain
Allexi_40kDa	PF05549.6	gi|118575246|ref|YP_874989.1|	-	0.018	14.3	0.0	0.028	13.7	0.0	1.3	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
Apolipoprotein	PF01442.13	gi|118575246|ref|YP_874989.1|	-	0.037	13.5	2.4	0.16	11.4	0.1	2.1	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
HalX	PF08663.5	gi|118575246|ref|YP_874989.1|	-	0.11	12.4	7.6	2	8.4	1.0	2.8	2	1	0	2	2	2	0	HalX	domain
DUF4618	PF15397.1	gi|118575246|ref|YP_874989.1|	-	0.24	10.7	2.4	3.8	6.7	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
Matrilin_ccoil	PF10393.4	gi|118575246|ref|YP_874989.1|	-	0.58	9.5	3.2	9.9	5.6	0.0	2.5	3	0	0	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
DUF883	PF05957.8	gi|118575246|ref|YP_874989.1|	-	1.4	9.3	8.2	8	6.9	0.2	3.0	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF883)
Prefoldin	PF02996.12	gi|118575246|ref|YP_874989.1|	-	3	7.5	5.6	4.8	6.8	0.6	2.9	2	1	1	3	3	3	0	Prefoldin	subunit
Pox_A_type_inc	PF04508.7	gi|118575246|ref|YP_874989.1|	-	5	7.1	5.8	1.1	9.2	0.8	2.4	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
Ribosomal_L37e	PF01907.14	gi|118575247|ref|YP_874990.1|	-	6.9e-22	77.0	11.1	7.2e-22	76.9	7.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
HypA	PF01155.14	gi|118575247|ref|YP_874990.1|	-	0.00099	18.7	0.5	0.0012	18.5	0.4	1.0	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
Ribosomal_S14	PF00253.16	gi|118575247|ref|YP_874990.1|	-	0.0044	16.3	1.3	0.0044	16.3	0.9	2.1	1	1	1	2	2	2	1	Ribosomal	protein	S14p/S29e
zinc_ribbon_6	PF14599.1	gi|118575247|ref|YP_874990.1|	-	0.0055	16.4	2.0	0.0068	16.1	1.4	1.2	1	0	0	1	1	1	1	Zinc-ribbon
DZR	PF12773.2	gi|118575247|ref|YP_874990.1|	-	0.007	16.1	0.8	0.0081	15.9	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Baculo_ME53	PF06061.6	gi|118575247|ref|YP_874990.1|	-	0.016	14.2	1.5	0.015	14.3	1.1	1.0	1	0	0	1	1	1	0	Baculoviridae	ME53
DUF35_N	PF12172.3	gi|118575247|ref|YP_874990.1|	-	0.038	13.9	5.7	0.053	13.4	4.0	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.6	gi|118575247|ref|YP_874990.1|	-	0.092	12.4	4.6	0.12	12.0	3.2	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|118575247|ref|YP_874990.1|	-	0.1	11.8	4.0	0.21	10.8	2.8	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-Mss51	PF13824.1	gi|118575247|ref|YP_874990.1|	-	0.13	12.1	5.8	0.19	11.6	0.4	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-HIT	PF04438.11	gi|118575247|ref|YP_874990.1|	-	0.13	11.9	3.2	1.6	8.4	0.1	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
C1_3	PF07649.7	gi|118575247|ref|YP_874990.1|	-	0.2	11.6	2.2	0.29	11.1	1.5	1.3	1	0	0	1	1	1	0	C1-like	domain
Zn-ribbon_8	PF09723.5	gi|118575247|ref|YP_874990.1|	-	0.22	11.5	2.8	4.9	7.1	0.2	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|118575247|ref|YP_874990.1|	-	0.25	11.3	8.4	1.4	9.0	0.4	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2688	PF10892.3	gi|118575247|ref|YP_874990.1|	-	0.84	9.3	5.2	0.44	10.2	2.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2688)
LIM	PF00412.17	gi|118575247|ref|YP_874990.1|	-	0.9	9.6	7.1	2.6	8.1	4.9	1.8	1	1	0	1	1	1	0	LIM	domain
zinc_ribbon_2	PF13240.1	gi|118575247|ref|YP_874990.1|	-	1.2	8.6	6.3	3.1	7.3	4.3	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|118575247|ref|YP_874990.1|	-	1.5	8.3	10.7	2.6	7.5	2.7	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_4	PF13717.1	gi|118575247|ref|YP_874990.1|	-	7.1	6.4	8.9	4.2	7.1	0.6	2.6	2	1	1	3	3	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118575247|ref|YP_874990.1|	-	8.7	6.0	8.7	4.8	6.8	0.6	2.6	2	1	1	3	3	2	0	zinc-ribbon	domain
LSM	PF01423.17	gi|118575248|ref|YP_874991.1|	-	1.7e-21	75.5	0.6	2e-21	75.3	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
Creatininase	PF02633.9	gi|118575249|ref|YP_874992.1|	-	7.3e-54	182.3	0.0	9e-54	182.0	0.0	1.1	1	0	0	1	1	1	1	Creatinine	amidohydrolase
Formyl_trans_N	PF00551.14	gi|118575250|ref|YP_874993.1|	-	1.5e-40	138.7	0.0	1.9e-40	138.3	0.0	1.1	1	0	0	1	1	1	1	Formyl	transferase
ACT_6	PF13740.1	gi|118575250|ref|YP_874993.1|	-	2.4e-07	30.3	0.0	1.7e-06	27.6	0.0	2.1	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.20	gi|118575250|ref|YP_874993.1|	-	0.0013	18.1	0.0	0.0043	16.4	0.0	1.9	1	0	0	1	1	1	1	ACT	domain
MGS	PF02142.17	gi|118575250|ref|YP_874993.1|	-	0.0042	17.0	0.0	0.01	15.7	0.0	1.6	1	0	0	1	1	1	1	MGS-like	domain
Oxidored_nitro	PF00148.14	gi|118575250|ref|YP_874993.1|	-	0.019	13.6	0.0	0.024	13.3	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
ACT_4	PF13291.1	gi|118575250|ref|YP_874993.1|	-	0.057	13.7	0.0	0.13	12.6	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
PDDEXK_1	PF12705.2	gi|118575251|ref|YP_874994.1|	-	7.5e-07	28.7	0.6	3.8e-06	26.4	0.4	1.9	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|118575251|ref|YP_874994.1|	-	0.00016	21.6	1.0	0.3	10.9	0.0	3.0	1	1	1	2	2	2	2	Domain	of	unknown	function	DUF83
Exo5	PF09810.4	gi|118575251|ref|YP_874994.1|	-	0.00049	19.4	5.4	0.029	13.5	0.4	2.6	1	1	1	2	2	2	2	Exonuclease	V	-	a	5'	deoxyribonuclease
Mg_chelatase	PF01078.16	gi|118575252|ref|YP_874995.1|	-	0.022	13.9	0.0	0.023	13.8	0.0	1.1	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF4636	PF15468.1	gi|118575252|ref|YP_874995.1|	-	0.19	11.1	2.0	0.2	11.0	1.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4636)
VWA_2	PF13519.1	gi|118575253|ref|YP_874996.1|	-	8e-36	123.7	0.2	9.8e-36	123.4	0.1	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|118575253|ref|YP_874996.1|	-	2.2e-21	76.4	0.0	2.7e-21	76.0	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|118575253|ref|YP_874996.1|	-	2.5e-08	33.7	0.0	1.6e-07	31.1	0.0	2.0	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|118575253|ref|YP_874996.1|	-	6.3e-07	28.7	0.0	8.7e-07	28.3	0.0	1.1	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
BatA	PF07584.6	gi|118575253|ref|YP_874996.1|	-	7.8e-05	22.7	1.1	9.8e-05	22.4	0.1	1.7	2	0	0	2	2	2	1	Aerotolerance	regulator	N-terminal
vWA-TerF-like	PF10138.4	gi|118575253|ref|YP_874996.1|	-	0.048	13.4	0.0	0.073	12.8	0.0	1.4	1	1	0	1	1	1	0	vWA	found	in	TerF	C	terminus
DUF58	PF01882.13	gi|118575254|ref|YP_874997.1|	-	4.7e-23	81.1	0.4	1.3e-22	79.7	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF58
VWA_2	PF13519.1	gi|118575254|ref|YP_874997.1|	-	8.4e-05	22.7	0.0	0.00012	22.2	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
AAA_3	PF07726.6	gi|118575255|ref|YP_874998.1|	-	1.9e-60	202.2	0.0	2.8e-60	201.6	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|118575255|ref|YP_874998.1|	-	1.7e-13	50.5	0.0	2.7e-13	49.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|118575255|ref|YP_874998.1|	-	7.8e-06	26.1	0.0	1.5e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|118575255|ref|YP_874998.1|	-	4.8e-05	22.8	0.0	0.00011	21.7	0.0	1.5	1	1	0	1	1	1	1	Sigma-54	interaction	domain
RuvB_N	PF05496.7	gi|118575255|ref|YP_874998.1|	-	0.00033	19.7	0.1	0.0017	17.4	0.0	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
MCM	PF00493.18	gi|118575255|ref|YP_874998.1|	-	0.00036	19.4	0.0	0.015	14.1	0.0	2.6	2	1	0	2	2	2	1	MCM2/3/5	family
Mg_chelatase	PF01078.16	gi|118575255|ref|YP_874998.1|	-	0.0024	17.0	0.6	0.085	11.9	0.3	2.3	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.9	gi|118575255|ref|YP_874998.1|	-	0.072	13.0	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
MarR_2	PF12802.2	gi|118575258|ref|YP_875001.1|	-	1.9e-11	43.4	0.2	5.7e-05	22.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_24	PF13412.1	gi|118575258|ref|YP_875001.1|	-	2.6e-10	39.5	0.0	0.00013	21.2	0.0	2.2	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|118575258|ref|YP_875001.1|	-	3e-08	33.1	0.1	0.00022	20.8	0.0	2.2	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|118575258|ref|YP_875001.1|	-	3.4e-08	33.1	0.0	0.001	18.8	0.0	2.2	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|118575258|ref|YP_875001.1|	-	1.9e-07	30.5	0.0	0.022	14.3	0.0	2.3	2	0	0	2	2	2	2	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|118575258|ref|YP_875001.1|	-	7.3e-07	28.8	0.0	0.042	13.5	0.0	2.2	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|118575258|ref|YP_875001.1|	-	1.4e-05	24.6	0.1	0.012	15.3	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_27	PF13463.1	gi|118575258|ref|YP_875001.1|	-	0.0053	17.0	0.1	2	8.7	0.0	2.6	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|118575258|ref|YP_875001.1|	-	0.0071	16.4	0.0	0.7	10.0	0.0	2.2	2	0	0	2	2	2	1	Penicillinase	repressor
RP-C	PF03428.8	gi|118575258|ref|YP_875001.1|	-	0.023	14.1	0.1	2	7.8	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	C	N-terminal	domain
Fe_dep_repress	PF01325.14	gi|118575258|ref|YP_875001.1|	-	0.064	13.1	0.1	0.6	10.0	0.0	2.3	3	0	0	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|118575258|ref|YP_875001.1|	-	0.069	13.2	0.0	3.9	7.6	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
S1	PF00575.18	gi|118575259|ref|YP_875002.1|	-	0.038	14.0	0.1	0.1	12.7	0.1	1.7	1	0	0	1	1	1	0	S1	RNA	binding	domain
BNR_2	PF13088.1	gi|118575260|ref|YP_875003.1|	-	2.9e-18	66.1	1.7	5.2e-14	52.1	0.0	2.2	1	1	1	2	2	2	2	BNR	repeat-like	domain
BNR	PF02012.15	gi|118575260|ref|YP_875003.1|	-	5.8e-08	31.4	20.6	0.41	10.6	0.4	6.5	5	0	0	5	5	5	5	BNR/Asp-box	repeat
DsbD	PF02683.10	gi|118575261|ref|YP_875004.1|	-	1.6e-57	194.4	14.9	3e-57	193.6	10.3	1.4	1	1	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
AhpC-TSA	PF00578.16	gi|118575261|ref|YP_875004.1|	-	7.6e-12	45.0	0.0	1.1e-11	44.4	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|118575261|ref|YP_875004.1|	-	4e-11	42.6	0.0	5.7e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|118575261|ref|YP_875004.1|	-	9.6e-09	35.2	0.0	2e-08	34.2	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin	PF00085.15	gi|118575261|ref|YP_875004.1|	-	0.00073	19.1	0.0	0.0012	18.4	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|118575261|ref|YP_875004.1|	-	0.0026	17.9	0.0	0.0042	17.2	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like	domain
DUF2182	PF09948.4	gi|118575261|ref|YP_875004.1|	-	0.21	11.4	5.3	1.8	8.4	3.7	2.3	1	1	0	1	1	1	0	Predicted	metal-binding	integral	membrane	protein	(DUF2182)
DUF1625	PF07787.7	gi|118575261|ref|YP_875004.1|	-	1.6	7.9	9.1	0.36	10.0	0.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1625)
PIRT	PF15099.1	gi|118575261|ref|YP_875004.1|	-	4.1	6.6	6.4	0.3	10.2	0.5	2.0	2	0	0	2	2	2	0	Phosphoinositide-interacting	protein	family
DUF1673	PF07895.6	gi|118575261|ref|YP_875004.1|	-	4.9	6.6	5.9	4.4	6.7	1.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1673)
zf-RING_4	PF14570.1	gi|118575262|ref|YP_875005.1|	-	0.00043	19.8	0.6	0.099	12.2	0.0	2.1	2	0	0	2	2	2	2	RING/Ubox	like	zinc-binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|118575262|ref|YP_875005.1|	-	0.0063	16.1	0.2	0.0076	15.8	0.1	1.1	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Rad50_zn_hook	PF04423.9	gi|118575262|ref|YP_875005.1|	-	0.027	13.9	3.1	1.1	8.8	0.0	2.3	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
DUF4451	PF14616.1	gi|118575262|ref|YP_875005.1|	-	0.032	13.9	1.3	1.1	8.9	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4451)
zf-RING_3	PF14369.1	gi|118575262|ref|YP_875005.1|	-	0.032	14.2	0.3	2.8	8.0	0.1	2.1	2	0	0	2	2	2	0	zinc-finger
FANCL_C	PF11793.3	gi|118575262|ref|YP_875005.1|	-	0.043	13.7	0.4	3.1	7.8	0.0	2.1	2	0	0	2	2	2	0	FANCL	C-terminal	domain
zinc_ribbon_5	PF13719.1	gi|118575262|ref|YP_875005.1|	-	0.058	12.9	1.1	1.2	8.7	0.0	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|118575262|ref|YP_875005.1|	-	0.07	12.9	0.8	4.1	7.2	0.0	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-MIZ	PF02891.15	gi|118575262|ref|YP_875005.1|	-	0.1	12.1	0.1	7.6	6.1	0.0	2.1	2	0	0	2	2	2	0	MIZ/SP-RING	zinc	finger
zf-RING_5	PF14634.1	gi|118575262|ref|YP_875005.1|	-	0.11	12.2	0.9	5.2	6.8	0.0	2.1	2	0	0	2	2	2	0	zinc-RING	finger	domain
zinc_ribbon_4	PF13717.1	gi|118575262|ref|YP_875005.1|	-	0.15	11.8	1.6	2.1	8.1	0.0	2.4	2	1	1	3	3	3	0	zinc-ribbon	domain
DUF2387	PF09526.5	gi|118575262|ref|YP_875005.1|	-	0.19	11.6	1.0	0.36	10.7	0.7	1.4	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1	PF03811.8	gi|118575262|ref|YP_875005.1|	-	0.22	11.0	0.9	5	6.7	0.2	2.2	2	0	0	2	2	2	0	InsA	N-terminal	domain
zf-H2C2_2	PF13465.1	gi|118575262|ref|YP_875005.1|	-	0.22	11.8	2.5	2.1	8.7	0.1	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-Apc11	PF12861.2	gi|118575262|ref|YP_875005.1|	-	0.26	11.1	1.2	9.7	6.1	0.0	2.1	1	1	1	2	2	2	0	Anaphase-promoting	complex	subunit	11	RING-H2	finger
DZR	PF12773.2	gi|118575262|ref|YP_875005.1|	-	0.26	11.1	1.8	0.45	10.3	1.3	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-C4_Topoisom	PF01396.14	gi|118575262|ref|YP_875005.1|	-	0.28	10.7	1.7	2.9	7.4	0.2	2.3	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-Di19	PF05605.7	gi|118575262|ref|YP_875005.1|	-	0.29	11.2	2.2	5.4	7.2	0.1	2.1	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C3HC4_3	PF13920.1	gi|118575262|ref|YP_875005.1|	-	0.29	10.8	3.7	13	5.5	2.5	2.1	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Elf1	PF05129.8	gi|118575262|ref|YP_875005.1|	-	0.73	9.5	3.1	1.2	8.8	2.1	1.4	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
TatD_DNase	PF01026.16	gi|118575263|ref|YP_875006.1|	-	7e-43	146.6	0.0	7.9e-43	146.4	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
HTH_16	PF12645.2	gi|118575263|ref|YP_875006.1|	-	0.053	13.4	0.0	0.26	11.2	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
CBFD_NFYB_HMF	PF00808.18	gi|118575264|ref|YP_875007.1|	-	9.7e-13	47.9	0.1	1e-12	47.8	0.1	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.19	gi|118575264|ref|YP_875007.1|	-	1.4e-06	28.3	1.1	1.7e-06	28.0	0.7	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.1	gi|118575264|ref|YP_875007.1|	-	0.00019	21.5	0.3	0.00022	21.3	0.2	1.3	1	1	0	1	1	1	1	Kinetochore	component	CENP-S
TAF	PF02969.12	gi|118575264|ref|YP_875007.1|	-	0.0025	17.7	0.6	0.003	17.4	0.4	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
TFIID-31kDa	PF02291.10	gi|118575264|ref|YP_875007.1|	-	0.0029	17.3	0.0	0.0032	17.2	0.0	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
DUF2277	PF10041.4	gi|118575264|ref|YP_875007.1|	-	0.0065	16.4	0.5	0.4	10.6	0.1	2.1	1	1	1	2	2	2	1	Uncharacterized	conserved	protein	(DUF2277)
Bromo_TP	PF07524.8	gi|118575264|ref|YP_875007.1|	-	0.018	14.7	0.0	0.021	14.5	0.0	1.1	1	0	0	1	1	1	0	Bromodomain	associated
TFIID-18kDa	PF02269.11	gi|118575264|ref|YP_875007.1|	-	0.09	12.6	0.0	0.11	12.3	0.0	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
DUF1932	PF09130.6	gi|118575264|ref|YP_875007.1|	-	0.11	12.3	0.1	0.17	11.6	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1932)
Peptidase_M50	PF02163.17	gi|118575265|ref|YP_875008.1|	-	2.9e-23	81.8	0.2	2.3e-22	78.9	0.0	2.4	2	2	0	2	2	2	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|118575265|ref|YP_875008.1|	-	4.5e-11	42.4	0.0	8e-11	41.6	0.0	1.4	1	0	0	1	1	1	1	PDZ	domain
PDZ	PF00595.19	gi|118575265|ref|YP_875008.1|	-	0.027	14.6	0.1	0.052	13.7	0.1	1.4	1	0	0	1	1	1	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
ATP_bind_3	PF01171.15	gi|118575266|ref|YP_875009.1|	-	1.9e-21	76.4	0.0	2.8e-21	75.8	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|118575266|ref|YP_875009.1|	-	0.0013	17.3	0.0	0.0018	16.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
PAPS_reduct	PF01507.14	gi|118575266|ref|YP_875009.1|	-	0.012	15.5	0.0	0.029	14.1	0.0	1.8	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
DUF2392	PF10288.4	gi|118575266|ref|YP_875009.1|	-	0.11	12.8	0.0	0.26	11.6	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2392)
Zn-ribbon_8	PF09723.5	gi|118575266|ref|YP_875009.1|	-	0.24	11.3	2.3	12	5.9	0.4	2.7	2	0	0	2	2	2	0	Zinc	ribbon	domain
RecR	PF02132.10	gi|118575266|ref|YP_875009.1|	-	0.53	9.7	9.7	0.54	9.7	2.7	2.5	2	0	0	2	2	2	0	RecR	protein
TerB	PF05099.8	gi|118575267|ref|YP_875010.1|	-	0.0064	16.2	1.7	0.011	15.4	1.2	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TerB
CENP-K	PF11802.3	gi|118575267|ref|YP_875010.1|	-	0.058	12.6	0.5	0.078	12.1	0.3	1.3	1	1	0	1	1	1	0	Centromere-associated	protein	K
DUF465	PF04325.8	gi|118575267|ref|YP_875010.1|	-	0.29	10.8	3.6	2.8	7.6	0.4	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF465)
Vpu	PF00558.14	gi|118575267|ref|YP_875010.1|	-	0.68	9.5	4.5	7.5	6.1	0.5	3.0	3	0	0	3	3	3	0	Vpu	protein
DUF3340	PF11818.3	gi|118575267|ref|YP_875010.1|	-	0.97	9.3	6.1	1.7	8.5	4.2	1.5	1	1	0	1	1	1	0	C-terminal	domain	of	tail	specific	protease	(DUF3340)
Laminin_EGF	PF00053.19	gi|118575270|ref|YP_875013.1|	-	0.015	15.1	1.6	0.02	14.8	1.1	1.1	1	0	0	1	1	1	0	Laminin	EGF-like	(Domains	III	and	V)
DZR	PF12773.2	gi|118575270|ref|YP_875013.1|	-	0.06	13.1	1.1	0.083	12.7	0.8	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF3279	PF11682.3	gi|118575270|ref|YP_875013.1|	-	0.096	12.2	0.2	0.11	12.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3279)
DUF2321	PF10083.4	gi|118575270|ref|YP_875013.1|	-	0.11	12.0	0.2	0.13	11.7	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-ribbon_3	PF13248.1	gi|118575270|ref|YP_875013.1|	-	0.21	10.8	5.1	0.83	8.9	0.4	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|118575270|ref|YP_875013.1|	-	0.76	9.1	3.6	6.9	6.0	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-C2H2_4	PF13894.1	gi|118575270|ref|YP_875013.1|	-	2.1	8.8	3.9	14	6.3	0.2	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Zn-ribbon_8	PF09723.5	gi|118575270|ref|YP_875013.1|	-	8.5	6.4	8.2	3.9e+02	1.1	5.7	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
SNO	PF01174.14	gi|118575272|ref|YP_875015.1|	-	2.2e-47	161.1	0.0	2.5e-47	160.9	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|118575272|ref|YP_875015.1|	-	1.9e-09	37.3	0.0	2.8e-09	36.7	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|118575272|ref|YP_875015.1|	-	3.4e-07	29.9	0.2	1.1e-06	28.1	0.1	1.7	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118575272|ref|YP_875015.1|	-	0.00016	21.1	0.1	0.022	14.2	0.1	2.5	1	1	0	1	1	1	1	Peptidase	C26
Peptidase_S51	PF03575.12	gi|118575272|ref|YP_875015.1|	-	0.001	18.8	0.1	0.0014	18.4	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
DJ-1_PfpI	PF01965.19	gi|118575272|ref|YP_875015.1|	-	0.011	15.2	0.0	0.015	14.7	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
SOR_SNZ	PF01680.12	gi|118575273|ref|YP_875016.1|	-	1.4e-91	305.7	3.4	1.8e-91	305.3	2.4	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|118575273|ref|YP_875016.1|	-	2.3e-07	30.1	3.0	1.5e-05	24.1	0.1	2.3	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|118575273|ref|YP_875016.1|	-	0.0011	18.1	7.8	0.01	15.0	0.1	2.4	3	0	0	3	3	3	2	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|118575273|ref|YP_875016.1|	-	0.0014	17.9	0.1	0.046	12.9	0.0	2.6	2	1	0	2	2	2	1	Histidine	biosynthesis	protein
Dus	PF01207.12	gi|118575273|ref|YP_875016.1|	-	0.0017	17.2	0.3	0.98	8.1	0.1	2.5	2	1	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NanE	PF04131.9	gi|118575273|ref|YP_875016.1|	-	0.0035	16.3	0.6	0.19	10.6	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IGPS	PF00218.16	gi|118575273|ref|YP_875016.1|	-	0.011	14.7	0.1	0.21	10.5	0.0	2.3	2	1	0	2	2	2	0	Indole-3-glycerol	phosphate	synthase
Bac_small_YrzI	PF09501.5	gi|118575273|ref|YP_875016.1|	-	0.11	12.3	0.0	0.24	11.3	0.0	1.4	1	0	0	1	1	1	0	Probable	sporulation	protein	(Bac_small_yrzI)
DUF3924	PF13062.1	gi|118575274|ref|YP_875017.1|	-	0.1	12.5	0.0	0.13	12.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3924)
Coat_F	PF07875.7	gi|118575274|ref|YP_875017.1|	-	0.15	12.2	0.1	0.35	11.0	0.0	1.6	1	1	1	2	2	2	0	Coat	F	domain
GvpL_GvpF	PF06386.6	gi|118575275|ref|YP_875018.1|	-	0.029	13.9	0.0	0.033	13.7	0.0	1.1	1	0	0	1	1	1	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
Aconitase	PF00330.15	gi|118575277|ref|YP_875020.1|	-	6.5e-144	479.8	0.1	9.9e-143	475.9	0.0	2.0	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|118575277|ref|YP_875020.1|	-	7.4e-37	126.3	0.0	1.2e-36	125.6	0.0	1.4	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
DUF521	PF04412.8	gi|118575277|ref|YP_875020.1|	-	0.043	12.3	0.1	0.083	11.4	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF521)
Cas_Cmr5	PF09701.5	gi|118575279|ref|YP_875022.1|	-	0.072	13.2	0.0	0.14	12.2	0.0	1.5	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cmr5)
AsnC_trans_reg	PF01037.16	gi|118575281|ref|YP_875024.1|	-	3.4e-11	42.6	0.0	3.9e-11	42.4	0.0	1.0	1	0	0	1	1	1	1	AsnC	family
EVE	PF01878.13	gi|118575282|ref|YP_875025.1|	-	2.8e-39	134.4	0.1	3.2e-39	134.2	0.1	1.0	1	0	0	1	1	1	1	EVE	domain
B5	PF03484.10	gi|118575283|ref|YP_875026.1|	-	1.1e-14	54.0	0.0	2.2e-14	53.0	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|118575283|ref|YP_875026.1|	-	2.6e-06	27.0	0.0	4e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
tRNA-synt_His	PF13393.1	gi|118575283|ref|YP_875026.1|	-	0.0011	18.0	0.0	0.0019	17.3	0.0	1.3	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2d	PF01409.15	gi|118575285|ref|YP_875028.1|	-	9.1e-84	280.5	0.0	1.2e-83	280.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|118575285|ref|YP_875028.1|	-	0.00011	21.0	0.4	0.013	14.2	0.0	2.9	3	0	0	3	3	3	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2b	PF00587.20	gi|118575285|ref|YP_875028.1|	-	0.032	13.7	0.0	0.078	12.5	0.0	1.7	1	1	0	1	1	1	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF4443	PF14544.1	gi|118575285|ref|YP_875028.1|	-	0.078	12.8	0.2	0.18	11.7	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4443)
Rsa3	PF14615.1	gi|118575285|ref|YP_875028.1|	-	0.11	11.7	0.5	3.1	7.1	0.0	2.5	2	0	0	2	2	2	0	Ribosome-assembly	protein	3
tRNA-synt_1b	PF00579.20	gi|118575286|ref|YP_875029.1|	-	4e-26	91.7	0.0	5.6e-26	91.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.13	gi|118575286|ref|YP_875029.1|	-	0.13	10.8	0.0	0.53	8.9	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
CTP_transf_2	PF01467.21	gi|118575288|ref|YP_875031.1|	-	1.9e-12	47.5	0.0	3.6e-12	46.5	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|118575288|ref|YP_875031.1|	-	0.0044	16.6	0.1	0.021	14.4	0.0	1.9	2	0	0	2	2	2	1	FAD	synthetase
Transketolase_N	PF00456.16	gi|118575292|ref|YP_875035.1|	-	2.8e-54	184.1	0.0	4.6e-54	183.4	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
Ribul_P_3_epim	PF00834.14	gi|118575292|ref|YP_875035.1|	-	7.9e-51	172.0	0.0	1.3e-50	171.3	0.0	1.3	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
E1_dh	PF00676.15	gi|118575292|ref|YP_875035.1|	-	0.00012	20.9	0.0	0.00021	20.1	0.0	1.3	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|118575292|ref|YP_875035.1|	-	0.00037	19.5	0.0	0.0042	16.0	0.0	2.1	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|118575292|ref|YP_875035.1|	-	0.00044	19.8	0.1	0.0021	17.6	0.1	2.0	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
XFP_N	PF09364.5	gi|118575292|ref|YP_875035.1|	-	0.02	13.4	0.4	0.061	11.8	0.3	1.9	1	1	0	1	1	1	0	XFP	N-terminal	domain
Transket_pyr	PF02779.19	gi|118575293|ref|YP_875036.1|	-	2.6e-30	105.2	0.1	4e-30	104.6	0.1	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|118575293|ref|YP_875036.1|	-	1.3e-28	99.4	0.3	5.7e-28	97.3	0.0	2.0	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Transaldolase	PF00923.14	gi|118575294|ref|YP_875037.1|	-	8.4e-51	172.7	0.0	7.7e-50	169.6	0.0	2.1	1	1	0	1	1	1	1	Transaldolase
TBP	PF00352.16	gi|118575298|ref|YP_875041.1|	-	4.6e-60	198.9	0.0	5.1e-31	105.8	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|118575298|ref|YP_875041.1|	-	0.00013	21.9	0.0	0.09	12.8	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
PALP	PF00291.20	gi|118575300|ref|YP_875043.1|	-	2.3e-20	73.0	0.3	4.2e-19	68.9	0.0	2.8	2	1	0	2	2	2	1	Pyridoxal-phosphate	dependent	enzyme
VWA	PF00092.23	gi|118575301|ref|YP_875044.1|	-	0.00062	19.5	0.0	0.0018	18.0	0.0	1.7	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|118575301|ref|YP_875044.1|	-	0.055	13.2	0.0	0.22	11.3	0.0	1.9	2	0	0	2	2	2	0	vWA	found	in	TerF	C	terminus
AAA_5	PF07728.9	gi|118575302|ref|YP_875045.1|	-	1.6e-21	76.4	0.0	2.5e-21	75.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|118575302|ref|YP_875045.1|	-	1.8e-11	43.7	0.0	2.8e-11	43.1	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.24	gi|118575302|ref|YP_875045.1|	-	6.1e-07	29.6	0.0	1.1e-06	28.8	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|118575302|ref|YP_875045.1|	-	3.3e-06	27.0	0.0	5.6e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|118575302|ref|YP_875045.1|	-	5.8e-06	26.4	0.1	1.1e-05	25.5	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|118575302|ref|YP_875045.1|	-	3.2e-05	23.0	0.1	0.00057	18.9	0.0	2.2	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|118575302|ref|YP_875045.1|	-	9.9e-05	21.8	0.0	0.00021	20.7	0.0	1.5	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_22	PF13401.1	gi|118575302|ref|YP_875045.1|	-	0.00017	21.7	0.1	0.00032	20.8	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|118575302|ref|YP_875045.1|	-	0.00028	20.6	0.0	0.00043	20.0	0.0	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_17	PF13207.1	gi|118575302|ref|YP_875045.1|	-	0.00072	20.3	0.1	0.0013	19.5	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|118575302|ref|YP_875045.1|	-	0.00079	18.6	0.1	0.47	9.5	0.0	2.2	1	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|118575302|ref|YP_875045.1|	-	0.0012	18.7	0.0	0.0022	17.8	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
CbbQ_C	PF08406.5	gi|118575302|ref|YP_875045.1|	-	0.0015	18.4	0.0	0.0032	17.4	0.0	1.5	1	0	0	1	1	1	1	CbbQ/NirQ/NorQ	C-terminal
Sigma54_activ_2	PF14532.1	gi|118575302|ref|YP_875045.1|	-	0.0034	17.4	0.0	0.0074	16.3	0.0	1.6	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|118575302|ref|YP_875045.1|	-	0.0035	16.9	0.1	0.0097	15.5	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|118575302|ref|YP_875045.1|	-	0.0041	17.1	0.0	0.0077	16.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|118575302|ref|YP_875045.1|	-	0.0043	16.4	0.0	0.0095	15.3	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|118575302|ref|YP_875045.1|	-	0.0048	16.6	0.1	0.0088	15.7	0.1	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_tran	PF00005.22	gi|118575302|ref|YP_875045.1|	-	0.0048	17.1	0.1	0.014	15.7	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
Miro	PF08477.8	gi|118575302|ref|YP_875045.1|	-	0.0055	17.1	0.0	0.012	16.0	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
AAA_29	PF13555.1	gi|118575302|ref|YP_875045.1|	-	0.01	15.3	0.0	0.026	14.0	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|118575302|ref|YP_875045.1|	-	0.011	15.4	0.0	0.023	14.4	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|118575302|ref|YP_875045.1|	-	0.022	13.6	0.0	0.051	12.4	0.0	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|118575302|ref|YP_875045.1|	-	0.022	14.4	0.0	0.04	13.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.1	gi|118575302|ref|YP_875045.1|	-	0.024	14.1	0.3	0.061	12.8	0.1	1.9	2	1	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|118575302|ref|YP_875045.1|	-	0.026	13.6	0.0	0.04	13.0	0.0	1.2	1	0	0	1	1	1	0	KaiC
Rad17	PF03215.10	gi|118575302|ref|YP_875045.1|	-	0.029	13.0	0.0	0.032	12.9	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
UPF0079	PF02367.12	gi|118575302|ref|YP_875045.1|	-	0.036	13.6	0.0	0.072	12.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
KAP_NTPase	PF07693.9	gi|118575302|ref|YP_875045.1|	-	0.044	12.7	0.0	0.1	11.5	0.0	1.5	1	1	1	2	2	2	0	KAP	family	P-loop	domain
NB-ARC	PF00931.17	gi|118575302|ref|YP_875045.1|	-	0.047	12.5	0.0	0.071	11.9	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
DUF258	PF03193.11	gi|118575302|ref|YP_875045.1|	-	0.056	12.6	0.0	0.089	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|118575302|ref|YP_875045.1|	-	0.06	13.6	0.4	0.084	13.1	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|118575302|ref|YP_875045.1|	-	0.066	13.3	0.0	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
AAA_23	PF13476.1	gi|118575302|ref|YP_875045.1|	-	0.076	13.3	0.1	0.14	12.4	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
Septin	PF00735.13	gi|118575302|ref|YP_875045.1|	-	0.14	11.1	0.1	0.25	10.3	0.0	1.5	2	0	0	2	2	2	0	Septin
AAA_11	PF13086.1	gi|118575302|ref|YP_875045.1|	-	0.15	11.6	0.0	0.2	11.2	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Lycopene_cycl	PF05834.7	gi|118575303|ref|YP_875046.1|	-	2.9e-06	26.4	0.1	6.1e-06	25.3	0.1	1.6	1	1	0	1	1	1	1	Lycopene	cyclase	protein
FAD_binding_2	PF00890.19	gi|118575303|ref|YP_875046.1|	-	6.2e-06	25.3	1.3	0.0043	15.9	0.5	2.2	1	1	1	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|118575303|ref|YP_875046.1|	-	1.9e-05	23.7	0.3	0.0085	15.0	0.4	2.3	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|118575303|ref|YP_875046.1|	-	0.0011	18.0	0.1	0.0027	16.8	0.1	1.6	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|118575303|ref|YP_875046.1|	-	0.002	16.8	0.3	0.62	8.6	0.1	2.3	2	0	0	2	2	2	2	Tryptophan	halogenase
NAD_binding_8	PF13450.1	gi|118575303|ref|YP_875046.1|	-	0.0055	16.7	0.1	0.025	14.5	0.0	2.2	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|118575303|ref|YP_875046.1|	-	0.013	15.9	0.5	0.034	14.5	0.1	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|118575303|ref|YP_875046.1|	-	0.014	14.5	1.4	0.033	13.2	0.1	2.0	3	0	0	3	3	3	0	FAD	binding	domain
Thi4	PF01946.12	gi|118575303|ref|YP_875046.1|	-	0.019	14.0	0.2	0.049	12.7	0.1	1.7	2	0	0	2	2	2	0	Thi4	family
Pyr_redox_2	PF07992.9	gi|118575303|ref|YP_875046.1|	-	0.023	14.5	0.3	0.071	12.9	0.2	1.9	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.13	gi|118575303|ref|YP_875046.1|	-	0.042	13.8	0.0	0.095	12.7	0.0	1.6	1	0	0	1	1	1	0	TrkA-N	domain
HI0933_like	PF03486.9	gi|118575303|ref|YP_875046.1|	-	0.085	11.3	0.2	0.13	10.7	0.1	1.2	1	0	0	1	1	1	0	HI0933-like	protein
RNA_binding	PF01877.12	gi|118575304|ref|YP_875047.1|	-	2.9e-23	82.1	0.0	3.4e-23	81.9	0.0	1.0	1	0	0	1	1	1	1	RNA	binding
Ribosomal_S3Ae	PF01015.13	gi|118575305|ref|YP_875048.1|	-	7.9e-62	208.0	4.9	8.8e-62	207.9	3.4	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF3480	PF11979.3	gi|118575305|ref|YP_875048.1|	-	0.024	13.2	0.0	0.03	12.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3480)
tRNA-synt_2b	PF00587.20	gi|118575306|ref|YP_875049.1|	-	3.3e-34	117.9	0.0	6.6e-34	116.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|118575306|ref|YP_875049.1|	-	3.7e-21	75.1	0.2	6e-21	74.4	0.2	1.3	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
JTB	PF05439.7	gi|118575306|ref|YP_875049.1|	-	0.036	13.8	0.1	0.07	12.9	0.1	1.4	1	0	0	1	1	1	0	Jumping	translocation	breakpoint	protein	(JTB)
DHHA1	PF02272.14	gi|118575308|ref|YP_875051.1|	-	2.6e-08	33.4	1.5	9.8e-08	31.5	0.8	2.2	1	1	0	1	1	1	1	DHHA1	domain
DHH	PF01368.15	gi|118575308|ref|YP_875051.1|	-	2.8e-07	30.2	0.0	4.3e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	DHH	family
Ribosomal_S13_N	PF08069.7	gi|118575309|ref|YP_875052.1|	-	9.9e-23	79.7	0.2	1.7e-22	79.0	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|118575309|ref|YP_875052.1|	-	2.7e-16	59.1	0.1	4e-16	58.5	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
Ribosomal_S17e	PF00833.13	gi|118575310|ref|YP_875053.1|	-	5.1e-12	45.6	1.0	7.1e-12	45.1	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	S17
DUF2975	PF11188.3	gi|118575311|ref|YP_875054.1|	-	0.067	12.9	0.8	0.088	12.5	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
HNH	PF01844.18	gi|118575312|ref|YP_875055.1|	-	3.1e-07	30.1	4.9	5.6e-07	29.3	3.4	1.5	1	0	0	1	1	1	1	HNH	endonuclease
HNH_4	PF13395.1	gi|118575312|ref|YP_875055.1|	-	4e-07	29.5	1.1	7.5e-07	28.6	0.7	1.5	1	0	0	1	1	1	1	HNH	endonuclease
Vault	PF01505.13	gi|118575312|ref|YP_875055.1|	-	0.011	15.7	1.2	0.026	14.5	0.1	2.1	2	0	0	2	2	2	0	Major	Vault	Protein	repeat
DUF4378	PF14309.1	gi|118575312|ref|YP_875055.1|	-	0.022	14.8	0.2	0.87	9.6	0.0	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4378)
Endonuclease_7	PF02945.10	gi|118575312|ref|YP_875055.1|	-	0.074	12.7	1.0	0.16	11.6	0.7	1.5	1	0	0	1	1	1	0	Recombination	endonuclease	VII
Glycos_transf_2	PF00535.21	gi|118575313|ref|YP_875056.1|	-	7.4e-29	100.5	0.0	1.7e-28	99.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|118575313|ref|YP_875056.1|	-	6e-23	81.8	0.0	1.1e-22	81.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|118575313|ref|YP_875056.1|	-	3.4e-10	39.4	0.0	9e-10	38.1	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|118575313|ref|YP_875056.1|	-	5.6e-08	32.2	0.0	5.6e-07	28.9	0.0	2.3	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF2254	PF10011.4	gi|118575313|ref|YP_875056.1|	-	4.6e-05	22.0	1.3	9.3e-05	21.0	0.9	1.4	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2254)
Glyco_trans_2_3	PF13632.1	gi|118575313|ref|YP_875056.1|	-	0.00035	20.3	0.7	0.00035	20.3	0.5	2.7	3	2	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_4	PF13704.1	gi|118575313|ref|YP_875056.1|	-	0.0011	19.2	0.0	0.0027	17.9	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
DZR	PF12773.2	gi|118575314|ref|YP_875057.1|	-	0.0028	17.4	1.0	0.0033	17.2	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Ribosomal_L40e	PF01020.12	gi|118575314|ref|YP_875057.1|	-	0.028	14.0	8.3	0.13	11.8	5.6	1.9	1	1	1	2	2	2	0	Ribosomal	L40e	family
UPF1_Zn_bind	PF09416.5	gi|118575314|ref|YP_875057.1|	-	0.094	12.2	1.3	0.11	12.0	0.9	1.1	1	0	0	1	1	1	0	RNA	helicase	(UPF2	interacting	domain)
zf-tcix	PF14952.1	gi|118575314|ref|YP_875057.1|	-	0.097	12.0	6.2	0.11	11.8	4.3	1.2	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-C3HC4_3	PF13920.1	gi|118575314|ref|YP_875057.1|	-	0.12	12.0	1.7	0.13	11.9	1.2	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_2	PF13240.1	gi|118575314|ref|YP_875057.1|	-	0.15	11.5	2.6	0.37	10.3	1.8	1.6	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-AN1	PF01428.11	gi|118575314|ref|YP_875057.1|	-	0.21	11.4	3.0	0.29	11.0	2.1	1.2	1	0	0	1	1	1	0	AN1-like	Zinc	finger
C1_1	PF00130.17	gi|118575314|ref|YP_875057.1|	-	0.23	11.2	2.2	0.31	10.8	1.5	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-RING_4	PF14570.1	gi|118575314|ref|YP_875057.1|	-	0.26	10.9	2.7	0.36	10.4	1.9	1.2	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
CoA_binding	PF02629.14	gi|118575315|ref|YP_875058.1|	-	2.1e-17	63.3	0.6	6.6e-17	61.8	0.1	2.0	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|118575315|ref|YP_875058.1|	-	1.5e-09	37.6	0.1	2.5e-09	36.9	0.1	1.4	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|118575315|ref|YP_875058.1|	-	8.7e-05	22.1	0.0	0.00017	21.1	0.0	1.5	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|118575315|ref|YP_875058.1|	-	0.00018	21.6	0.0	0.00031	20.9	0.0	1.4	1	0	0	1	1	1	1	CoA	binding	domain
GFO_IDH_MocA	PF01408.17	gi|118575315|ref|YP_875058.1|	-	0.00058	20.3	0.0	0.0011	19.4	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ATP-grasp_2	PF08442.5	gi|118575316|ref|YP_875059.1|	-	1.9e-42	144.9	1.2	3.1e-42	144.2	0.8	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|118575316|ref|YP_875059.1|	-	4.6e-14	52.2	0.1	8.8e-14	51.3	0.1	1.4	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|118575316|ref|YP_875059.1|	-	1.4e-12	47.2	0.4	9.1e-12	44.6	0.3	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118575316|ref|YP_875059.1|	-	8.9e-07	28.8	0.0	1.5e-06	28.0	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|118575316|ref|YP_875059.1|	-	2.3e-06	27.0	0.1	4e-06	26.2	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp	PF02222.17	gi|118575316|ref|YP_875059.1|	-	0.022	14.1	0.1	0.039	13.2	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
DUF362	PF04015.7	gi|118575316|ref|YP_875059.1|	-	0.05	13.0	0.0	0.38	10.2	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF362)
tRNA-synt_1	PF00133.17	gi|118575318|ref|YP_875061.1|	-	6.2e-140	467.0	0.0	8.1e-140	466.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|118575318|ref|YP_875061.1|	-	1.9e-26	92.6	0.0	3.9e-26	91.6	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|118575318|ref|YP_875061.1|	-	2e-20	72.8	0.1	2.7e-08	32.9	0.0	4.0	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|118575318|ref|YP_875061.1|	-	2.1e-06	27.0	0.0	2e-05	23.8	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|118575318|ref|YP_875061.1|	-	0.00039	19.2	0.0	0.0011	17.6	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
GARS_A	PF01071.14	gi|118575319|ref|YP_875062.1|	-	3.7e-71	238.7	0.0	4.7e-71	238.3	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_C	PF02843.11	gi|118575319|ref|YP_875062.1|	-	1.8e-30	104.9	0.1	2.8e-29	101.1	0.0	2.2	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	C	domain
GARS_N	PF02844.10	gi|118575319|ref|YP_875062.1|	-	6.7e-26	90.6	0.0	1.2e-25	89.8	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
ATP-grasp_4	PF13535.1	gi|118575319|ref|YP_875062.1|	-	1.2e-10	41.4	0.0	1.9e-10	40.7	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|118575319|ref|YP_875062.1|	-	2.9e-05	23.4	0.0	4.4e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|118575319|ref|YP_875062.1|	-	0.00016	21.5	0.0	0.00024	20.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|118575319|ref|YP_875062.1|	-	0.0022	17.2	0.1	0.0036	16.6	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_2	PF08442.5	gi|118575319|ref|YP_875062.1|	-	0.0049	16.2	0.0	0.0082	15.5	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|118575319|ref|YP_875062.1|	-	0.021	14.2	0.0	0.032	13.7	0.0	1.2	1	0	0	1	1	1	0	RimK-like	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|118575319|ref|YP_875062.1|	-	0.14	11.4	0.0	0.22	10.9	0.0	1.2	1	0	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
5-FTHF_cyc-lig	PF01812.15	gi|118575320|ref|YP_875063.1|	-	4.5e-38	130.8	0.0	5e-38	130.7	0.0	1.0	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
THF_DHG_CYH_C	PF02882.14	gi|118575321|ref|YP_875064.1|	-	5.3e-59	197.8	1.1	8.1e-59	197.2	0.8	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.18	gi|118575321|ref|YP_875064.1|	-	1.1e-39	135.1	0.0	1.7e-39	134.4	0.0	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
Semialdhyde_dh	PF01118.19	gi|118575321|ref|YP_875064.1|	-	0.092	13.0	0.0	0.19	12.0	0.0	1.5	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Formyl_trans_N	PF00551.14	gi|118575323|ref|YP_875066.1|	-	3.3e-43	147.3	0.0	3.7e-43	147.1	0.0	1.0	1	0	0	1	1	1	1	Formyl	transferase
RMMBL	PF07521.7	gi|118575324|ref|YP_875067.1|	-	0.00028	20.6	0.0	0.00073	19.3	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|118575324|ref|YP_875067.1|	-	0.0056	16.2	0.1	3	7.3	0.1	3.0	2	1	0	2	2	2	2	Beta-lactamase	superfamily	domain
Peptidase_C34	PF05413.6	gi|118575325|ref|YP_875068.1|	-	0.19	11.7	1.8	0.35	10.9	1.3	1.5	1	1	0	1	1	1	0	Putative	closterovirus	papain-like	endopeptidase
AsnC_trans_reg	PF01037.16	gi|118575326|ref|YP_875069.1|	-	7.6e-07	28.7	0.1	1.2e-06	28.0	0.1	1.3	1	0	0	1	1	1	1	AsnC	family
ACT_4	PF13291.1	gi|118575326|ref|YP_875069.1|	-	0.052	13.8	0.0	2.3	8.6	0.0	2.2	2	0	0	2	2	2	0	ACT	domain
Spt5-NGN	PF03439.8	gi|118575326|ref|YP_875069.1|	-	0.11	12.2	0.2	0.95	9.2	0.0	2.0	2	0	0	2	2	2	0	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
DDE_Tnp_4	PF13359.1	gi|118575327|ref|YP_875070.1|	-	0.00068	19.2	0.0	0.0008	19.0	0.0	1.1	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DUF1256	PF06866.6	gi|118575328|ref|YP_875071.1|	-	0.0039	16.4	4.6	0.013	14.6	0.8	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1256)
zf-RING_3	PF14369.1	gi|118575329|ref|YP_875072.1|	-	0.00026	20.9	2.2	0.00076	19.4	1.5	1.6	1	1	1	2	2	2	1	zinc-finger
zinc_ribbon_4	PF13717.1	gi|118575329|ref|YP_875072.1|	-	0.00049	19.7	3.0	0.057	13.1	0.7	2.1	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118575329|ref|YP_875072.1|	-	0.0011	18.5	0.5	0.075	12.6	0.0	2.2	1	1	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|118575329|ref|YP_875072.1|	-	0.0019	17.3	0.7	0.03	13.5	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|118575329|ref|YP_875072.1|	-	0.0075	15.9	1.9	0.019	14.7	1.3	1.7	1	1	0	1	1	1	1	Prokaryotic	RING	finger	family	1
OrfB_Zn_ribbon	PF07282.6	gi|118575329|ref|YP_875072.1|	-	0.01	15.4	0.4	0.014	15.0	0.3	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-C4_Topoisom	PF01396.14	gi|118575329|ref|YP_875072.1|	-	0.011	15.1	0.5	0.16	11.4	0.0	2.0	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-IS66	PF13005.2	gi|118575329|ref|YP_875072.1|	-	0.013	15.4	3.3	0.26	11.3	0.3	2.3	2	1	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
HypA	PF01155.14	gi|118575329|ref|YP_875072.1|	-	0.029	14.0	0.3	0.03	14.0	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|118575329|ref|YP_875072.1|	-	0.037	13.5	2.3	0.2	11.1	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-HYPF	PF07503.7	gi|118575329|ref|YP_875072.1|	-	0.056	12.8	1.1	0.35	10.3	0.8	1.9	1	1	0	1	1	1	0	HypF	finger
TerY-C	PF15616.1	gi|118575329|ref|YP_875072.1|	-	0.06	13.2	0.7	0.12	12.3	0.5	1.6	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
Zn-ribbon_8	PF09723.5	gi|118575329|ref|YP_875072.1|	-	0.074	13.0	2.6	0.14	12.0	1.8	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
BssC_TutF	PF08201.6	gi|118575329|ref|YP_875072.1|	-	0.079	12.4	0.1	3	7.4	0.0	2.0	2	0	0	2	2	2	0	BssC/TutF	protein
DZR	PF12773.2	gi|118575329|ref|YP_875072.1|	-	0.082	12.7	0.9	0.15	11.9	0.6	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|118575329|ref|YP_875072.1|	-	0.093	13.0	1.5	0.14	12.4	1.0	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF35_N	PF12172.3	gi|118575329|ref|YP_875072.1|	-	0.16	11.9	1.6	5.9	6.9	1.1	2.1	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-CSL	PF05207.8	gi|118575329|ref|YP_875072.1|	-	0.17	11.4	2.0	0.26	10.8	1.3	1.4	1	1	0	1	1	1	0	CSL	zinc	finger
DnaJ_CXXCXGXG	PF00684.14	gi|118575329|ref|YP_875072.1|	-	0.18	11.8	2.4	1.4	9.0	1.7	1.9	1	1	0	1	1	1	0	DnaJ	central	domain
A2L_zn_ribbon	PF08792.5	gi|118575329|ref|YP_875072.1|	-	0.23	10.9	1.9	1.7	8.1	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
IBR	PF01485.16	gi|118575329|ref|YP_875072.1|	-	0.25	11.2	1.1	1.3	8.9	0.8	1.9	1	1	0	1	1	1	0	IBR	domain
PHD	PF00628.24	gi|118575329|ref|YP_875072.1|	-	0.26	11.0	1.6	2	8.1	1.2	2.0	1	1	0	1	1	1	0	PHD-finger
TF_Zn_Ribbon	PF08271.7	gi|118575329|ref|YP_875072.1|	-	0.31	10.4	4.7	1.8	7.9	0.3	2.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
RRN7	PF11781.3	gi|118575329|ref|YP_875072.1|	-	0.32	10.5	0.1	0.32	10.5	0.1	1.8	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
UPF0547	PF10571.4	gi|118575329|ref|YP_875072.1|	-	0.33	10.6	2.1	1.3	8.8	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF164	PF02591.10	gi|118575329|ref|YP_875072.1|	-	0.52	10.1	3.8	2	8.2	2.7	1.9	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|118575329|ref|YP_875072.1|	-	0.54	9.7	4.2	2.4	7.6	2.9	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
RimK	PF08443.6	gi|118575330|ref|YP_875073.1|	-	4.1e-43	147.0	0.0	5.1e-43	146.7	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|118575330|ref|YP_875073.1|	-	2.6e-09	36.4	0.0	3.4e-09	36.0	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118575330|ref|YP_875073.1|	-	2.2e-07	30.8	0.0	3.2e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|118575330|ref|YP_875073.1|	-	6.2e-07	29.4	0.0	9.2e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118575330|ref|YP_875073.1|	-	0.0003	19.6	0.0	0.0021	16.8	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|118575330|ref|YP_875073.1|	-	0.12	11.6	0.0	0.26	10.5	0.0	1.6	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Peptidase_M20	PF01546.23	gi|118575331|ref|YP_875074.1|	-	4.1e-29	101.4	0.2	5.1e-29	101.1	0.1	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|118575331|ref|YP_875074.1|	-	4.1e-12	45.8	0.0	8.8e-12	44.7	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M42	PF05343.9	gi|118575331|ref|YP_875074.1|	-	0.00074	18.3	0.4	0.73	8.5	0.0	2.6	2	1	1	3	3	3	2	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.12	gi|118575331|ref|YP_875074.1|	-	0.012	15.3	0.1	0.036	13.8	0.0	1.7	2	0	0	2	2	2	0	Peptidase	family	M28
TP_methylase	PF00590.15	gi|118575332|ref|YP_875075.1|	-	3.2e-16	59.6	0.1	5.1e-16	59.0	0.1	1.3	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF357	PF04010.8	gi|118575332|ref|YP_875075.1|	-	5.4e-10	38.8	0.1	7.2e-09	35.2	0.0	2.5	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF357)
Ala_racemase_C	PF00842.16	gi|118575332|ref|YP_875075.1|	-	0.028	13.8	0.1	0.18	11.1	0.0	2.2	2	0	0	2	2	2	0	Alanine	racemase,	C-terminal	domain
ETF	PF01012.16	gi|118575332|ref|YP_875075.1|	-	0.11	12.1	0.1	7.6	6.2	0.0	2.4	2	0	0	2	2	2	0	Electron	transfer	flavoprotein	domain
CTP_transf_2	PF01467.21	gi|118575333|ref|YP_875076.1|	-	4.7e-14	52.7	0.1	1.2e-13	51.4	0.1	1.6	1	1	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|118575333|ref|YP_875076.1|	-	0.2	11.2	1.1	0.33	10.5	0.7	1.4	1	1	0	1	1	1	0	FAD	synthetase
CTP-dep_RFKase	PF01982.11	gi|118575334|ref|YP_875077.1|	-	6.1e-40	135.6	0.0	8.1e-40	135.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_20	PF12840.2	gi|118575334|ref|YP_875077.1|	-	0.00013	21.7	0.1	0.00031	20.4	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|118575334|ref|YP_875077.1|	-	0.00042	19.9	0.0	0.00094	18.7	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|118575334|ref|YP_875077.1|	-	0.0006	19.1	0.0	0.0017	17.6	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|118575334|ref|YP_875077.1|	-	0.0015	18.1	0.0	0.0025	17.4	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.1	gi|118575334|ref|YP_875077.1|	-	0.0024	17.6	0.2	0.023	14.4	0.0	2.3	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|118575334|ref|YP_875077.1|	-	0.0058	16.3	0.0	0.012	15.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_12	PF08461.5	gi|118575334|ref|YP_875077.1|	-	0.0074	16.0	0.1	0.016	14.9	0.0	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HxlR	PF01638.12	gi|118575334|ref|YP_875077.1|	-	0.025	14.1	0.0	0.039	13.5	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_1	PF00126.22	gi|118575334|ref|YP_875077.1|	-	0.027	14.1	0.0	0.047	13.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_27	PF13463.1	gi|118575334|ref|YP_875077.1|	-	0.048	13.9	0.0	0.12	12.7	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|118575334|ref|YP_875077.1|	-	0.067	13.0	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|118575334|ref|YP_875077.1|	-	0.12	12.3	0.1	0.31	11.0	0.0	1.7	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
Cdc6_C	PF09079.6	gi|118575334|ref|YP_875077.1|	-	0.14	11.8	0.4	0.38	10.4	0.1	1.8	2	0	0	2	2	2	0	CDC6,	C	terminal
Toprim_4	PF13662.1	gi|118575335|ref|YP_875078.1|	-	2.9e-06	27.1	0.1	8.7e-06	25.6	0.1	1.9	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|118575335|ref|YP_875078.1|	-	0.014	15.3	0.2	0.045	13.7	0.2	2.0	1	1	0	1	1	1	0	Toprim	domain
Fe-S_biosyn	PF01521.15	gi|118575337|ref|YP_875080.1|	-	2e-23	82.4	0.0	2.2e-23	82.3	0.0	1.0	1	0	0	1	1	1	1	Iron-sulphur	cluster	biosynthesis
DDE_Tnp_IS66	PF03050.9	gi|118575339|ref|YP_875082.1|	-	0.00073	18.8	0.2	0.00088	18.5	0.1	1.1	1	0	0	1	1	1	1	Transposase	IS66	family
DDE_Tnp_IS66	PF03050.9	gi|118575340|ref|YP_875083.1|	-	0.0046	16.2	0.0	0.0051	16.0	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS66	family
ParBc	PF02195.13	gi|118575345|ref|YP_875088.1|	-	4.6e-05	23.4	0.0	5.2e-05	23.2	0.0	1.0	1	0	0	1	1	1	1	ParB-like	nuclease	domain
YycC	PF14174.1	gi|118575347|ref|YP_875090.1|	-	1.5	8.5	4.1	1	9.0	0.1	2.6	3	0	0	3	3	3	0	YycC-like	protein
DEAD	PF00270.24	gi|118575348|ref|YP_875091.1|	-	5.8e-05	22.6	0.0	0.00023	20.7	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
GRAM	PF02893.15	gi|118575349|ref|YP_875092.1|	-	0.005	16.3	0.0	0.011	15.2	0.0	1.5	1	0	0	1	1	1	1	GRAM	domain
Toprim_4	PF13662.1	gi|118575352|ref|YP_875095.1|	-	0.00015	21.7	0.2	0.00031	20.6	0.1	1.6	1	0	0	1	1	1	1	Toprim	domain
PAE	PF03283.8	gi|118575352|ref|YP_875095.1|	-	0.056	12.0	0.0	0.079	11.5	0.0	1.1	1	0	0	1	1	1	0	Pectinacetylesterase
Toprim_2	PF13155.1	gi|118575352|ref|YP_875095.1|	-	0.091	13.0	0.0	0.21	11.9	0.0	1.7	1	0	0	1	1	1	0	Toprim-like
HAUS2	PF15003.1	gi|118575352|ref|YP_875095.1|	-	0.11	11.4	0.0	0.27	10.2	0.0	1.6	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	2
DEAD	PF00270.24	gi|118575353|ref|YP_875096.1|	-	0.00057	19.4	0.0	0.0012	18.4	0.0	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Toprim_4	PF13662.1	gi|118575354|ref|YP_875097.1|	-	9.2e-07	28.7	0.0	1.5e-06	28.1	0.0	1.4	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|118575354|ref|YP_875097.1|	-	0.00023	21.0	0.1	0.00077	19.4	0.1	1.9	1	1	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.1	gi|118575354|ref|YP_875097.1|	-	0.013	15.8	0.0	0.027	14.7	0.0	1.6	1	0	0	1	1	1	0	Toprim-like
Pinin_SDK_N	PF04697.8	gi|118575356|ref|YP_875099.1|	-	0.019	15.0	0.6	0.019	15.0	0.4	1.2	1	0	0	1	1	1	0	pinin/SDK	conserved	region
zf-CHC2	PF01807.15	gi|118575358|ref|YP_875101.1|	-	0.15	11.6	0.0	0.21	11.1	0.0	1.2	1	0	0	1	1	1	0	CHC2	zinc	finger
SNF2_N	PF00176.18	gi|118575359|ref|YP_875102.1|	-	3.9e-23	81.7	0.1	7.3e-22	77.5	0.1	2.1	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
ResIII	PF04851.10	gi|118575359|ref|YP_875102.1|	-	3.5e-12	46.5	3.6	6.2e-12	45.7	0.2	2.8	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|118575359|ref|YP_875102.1|	-	9.5e-08	31.7	0.0	2.7e-07	30.2	0.0	1.7	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DUF2075	PF09848.4	gi|118575359|ref|YP_875102.1|	-	1.6e-06	27.3	0.5	3e-06	26.4	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
Helicase_RecD	PF05127.9	gi|118575359|ref|YP_875102.1|	-	1.7e-05	24.5	0.1	4.6e-05	23.1	0.0	1.7	2	0	0	2	2	2	1	Helicase
DUF2270	PF10028.4	gi|118575359|ref|YP_875102.1|	-	0.0039	16.7	0.1	0.0077	15.7	0.0	1.4	1	0	0	1	1	1	1	Predicted	integral	membrane	protein	(DUF2270)
AAA	PF00004.24	gi|118575359|ref|YP_875102.1|	-	0.0061	16.7	2.0	0.022	14.9	0.0	2.6	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Flavi_DEAD	PF07652.9	gi|118575359|ref|YP_875102.1|	-	0.0095	15.6	0.0	0.019	14.7	0.0	1.5	1	0	0	1	1	1	1	Flavivirus	DEAD	domain
DUF87	PF01935.12	gi|118575359|ref|YP_875102.1|	-	0.12	12.1	7.4	1.6	8.4	4.7	2.3	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
NAM-associated	PF14303.1	gi|118575359|ref|YP_875102.1|	-	0.2	11.9	5.2	0.41	10.9	3.6	1.5	1	0	0	1	1	1	0	No	apical	meristem-associated	C-terminal	domain
AAA_11	PF13086.1	gi|118575359|ref|YP_875102.1|	-	3.3	7.2	13.6	1	8.8	0.2	3.4	2	2	1	3	3	3	0	AAA	domain
DUF3883	PF13020.1	gi|118575360|ref|YP_875103.1|	-	2.6e-21	75.1	0.2	5.3e-21	74.1	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3883)
TPD52	PF04201.10	gi|118575360|ref|YP_875103.1|	-	0.013	15.2	2.6	0.023	14.4	1.8	1.4	1	0	0	1	1	1	0	Tumour	protein	D52	family
RP-C_C	PF11800.3	gi|118575360|ref|YP_875103.1|	-	0.023	14.4	0.5	0.03	14.0	0.4	1.2	1	0	0	1	1	1	0	Replication	protein	C	C-terminal	region
DUF342	PF03961.8	gi|118575360|ref|YP_875103.1|	-	0.26	9.6	4.0	0.39	9.0	2.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
RINGv	PF12906.2	gi|118575363|ref|YP_875106.1|	-	0.036	14.1	1.2	0.069	13.2	0.9	1.7	1	1	0	1	1	1	0	RING-variant	domain
DUF3522	PF12036.3	gi|118575366|ref|YP_875109.1|	-	0.0069	16.1	0.5	0.0073	16.1	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3522)
Voltage_CLC	PF00654.15	gi|118575366|ref|YP_875109.1|	-	0.015	14.3	0.8	0.018	14.0	0.5	1.0	1	0	0	1	1	1	0	Voltage	gated	chloride	channel
COPI_assoc	PF08507.5	gi|118575366|ref|YP_875109.1|	-	0.016	14.8	2.3	0.1	12.3	0.2	2.1	1	1	1	2	2	2	0	COPI	associated	protein
ABC2_membrane_4	PF12730.2	gi|118575366|ref|YP_875109.1|	-	0.044	12.9	0.0	0.064	12.4	0.0	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
PepSY_TM	PF03929.11	gi|118575366|ref|YP_875109.1|	-	0.045	14.1	0.4	4.9	7.7	0.0	2.4	2	0	0	2	2	2	0	PepSY-associated	TM	helix
DUF95	PF01944.12	gi|118575366|ref|YP_875109.1|	-	0.06	12.9	2.2	0.07	12.7	1.6	1.0	1	0	0	1	1	1	0	Integral	membrane	protein	DUF95
SNase	PF00565.12	gi|118575369|ref|YP_875112.1|	-	0.14	12.4	0.0	0.27	11.5	0.0	1.4	1	0	0	1	1	1	0	Staphylococcal	nuclease	homologue
Toxin_2	PF00451.14	gi|118575370|ref|YP_875113.1|	-	0.43	10.7	2.0	0.69	10.0	0.0	2.1	2	0	0	2	2	2	0	Scorpion	short	toxin,	BmKK2
Phage_integrase	PF00589.17	gi|118575371|ref|YP_875114.1|	-	0.0014	18.3	0.0	0.0043	16.7	0.0	1.7	2	0	0	2	2	2	1	Phage	integrase	family
ECH	PF00378.15	gi|118575372|ref|YP_875115.1|	-	1e-66	224.5	1.1	1.2e-66	224.3	0.8	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|118575372|ref|YP_875115.1|	-	0.012	15.4	0.3	0.77	9.5	0.0	2.3	2	0	0	2	2	2	0	Peptidase	family	S49
SDH_sah	PF01972.11	gi|118575372|ref|YP_875115.1|	-	0.028	13.1	0.0	0.042	12.6	0.0	1.4	1	0	0	1	1	1	0	Serine	dehydrogenase	proteinase
ATP-grasp_5	PF13549.1	gi|118575373|ref|YP_875116.1|	-	7e-64	215.0	0.3	1e-63	214.5	0.2	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|118575373|ref|YP_875116.1|	-	7.5e-48	161.6	0.1	3.9e-47	159.3	0.1	2.3	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|118575373|ref|YP_875116.1|	-	1.1e-27	96.4	0.0	9.1e-27	93.5	0.0	2.5	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|118575373|ref|YP_875116.1|	-	1.2e-10	41.7	0.4	2.1e-09	37.7	0.1	3.0	3	0	0	3	3	3	1	CoA	binding	domain
ATP-grasp_2	PF08442.5	gi|118575373|ref|YP_875116.1|	-	1.1e-05	24.8	0.1	3e-05	23.5	0.1	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118575373|ref|YP_875116.1|	-	0.00083	19.1	0.0	0.0039	16.9	0.0	2.1	2	0	0	2	2	2	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|118575373|ref|YP_875116.1|	-	0.11	11.9	0.0	0.24	10.7	0.0	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
GATase	PF00117.23	gi|118575374|ref|YP_875117.1|	-	1.7e-22	79.8	0.0	2.4e-22	79.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118575374|ref|YP_875117.1|	-	3.8e-06	26.4	0.0	8.8e-06	25.3	0.0	1.5	1	1	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.9	gi|118575374|ref|YP_875117.1|	-	0.066	12.7	0.1	0.16	11.5	0.0	1.6	2	0	0	2	2	2	0	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|118575374|ref|YP_875117.1|	-	0.099	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	DJ-1/PfpI	family
CIDE-N	PF02017.10	gi|118575375|ref|YP_875118.1|	-	0.017	14.8	0.3	0.36	10.6	0.0	2.4	3	0	0	3	3	3	0	CIDE-N	domain
zf-ISL3	PF14690.1	gi|118575375|ref|YP_875118.1|	-	0.47	10.5	8.4	0.19	11.7	1.2	3.2	4	0	0	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Env-gp36	PF09590.5	gi|118575377|ref|YP_875120.1|	-	0.058	11.5	0.0	0.092	10.9	0.0	1.2	1	1	0	1	1	1	0	Lentivirus	surface	glycoprotein
ELFV_dehydrog	PF00208.16	gi|118575379|ref|YP_875122.1|	-	2.5e-64	217.2	0.4	3.4e-64	216.7	0.3	1.2	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|118575379|ref|YP_875122.1|	-	1.3e-43	147.7	0.0	2.2e-43	146.9	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
Proteasome	PF00227.21	gi|118575381|ref|YP_875124.1|	-	4.2e-50	169.6	0.1	5.1e-50	169.4	0.1	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|118575381|ref|YP_875124.1|	-	6.4e-12	44.5	0.9	3e-11	42.3	0.1	2.3	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
Ubie_methyltran	PF01209.13	gi|118575382|ref|YP_875125.1|	-	1.7e-18	66.5	0.0	2.4e-18	66.1	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|118575382|ref|YP_875125.1|	-	4.5e-13	49.5	0.0	6.5e-13	48.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575382|ref|YP_875125.1|	-	1.4e-07	32.0	0.1	3.2e-07	30.9	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118575382|ref|YP_875125.1|	-	7.3e-07	29.0	0.0	8.7e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118575382|ref|YP_875125.1|	-	1.4e-05	25.4	0.0	2.6e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575382|ref|YP_875125.1|	-	3.7e-05	23.3	0.0	0.00012	21.7	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118575382|ref|YP_875125.1|	-	0.00081	19.7	0.0	0.0014	18.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118575382|ref|YP_875125.1|	-	0.0012	18.8	0.1	0.003	17.5	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|118575382|ref|YP_875125.1|	-	0.0015	17.9	0.1	0.0054	16.1	0.1	1.8	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.10	gi|118575382|ref|YP_875125.1|	-	0.031	13.9	0.0	0.049	13.2	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	methyltransferase
MFS_1	PF07690.11	gi|118575383|ref|YP_875126.1|	-	4.4e-40	137.4	47.1	5.6e-25	87.7	13.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|118575383|ref|YP_875126.1|	-	0.0054	16.4	9.0	0.056	13.2	0.3	4.1	4	0	0	4	4	4	2	MFS_1	like	family
MttA_Hcf106	PF02416.11	gi|118575384|ref|YP_875127.1|	-	9.2e-11	40.6	0.2	2e-09	36.4	0.0	2.1	1	1	1	2	2	2	2	mttA/Hcf106	family
DUF4175	PF13779.1	gi|118575384|ref|YP_875127.1|	-	0.05	11.3	0.6	0.058	11.0	0.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
E2_bind	PF08825.5	gi|118575385|ref|YP_875128.1|	-	0.097	12.4	1.4	0.11	12.2	1.0	1.1	1	0	0	1	1	1	0	E2	binding	domain
DUF4627	PF15425.1	gi|118575385|ref|YP_875128.1|	-	0.098	12.1	0.1	0.098	12.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4627)
Mgr1	PF08602.5	gi|118575385|ref|YP_875128.1|	-	0.15	11.0	1.2	0.16	10.9	0.9	1.0	1	0	0	1	1	1	0	Mgr1-like,	i-AAA	protease	complex	subunit
FCH	PF00611.18	gi|118575385|ref|YP_875128.1|	-	0.21	11.7	2.9	0.24	11.6	2.0	1.2	1	0	0	1	1	1	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
Bap31	PF05529.7	gi|118575385|ref|YP_875128.1|	-	0.23	10.8	3.4	0.26	10.7	2.4	1.0	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
Cut12	PF11500.3	gi|118575385|ref|YP_875128.1|	-	0.81	9.3	6.1	0.85	9.3	4.2	1.0	1	0	0	1	1	1	0	Spindle	pole	body	formation-associated	protein
TRAP-gamma	PF07074.7	gi|118575385|ref|YP_875128.1|	-	2.9	7.3	5.0	3.2	7.2	3.4	1.0	1	0	0	1	1	1	0	Translocon-associated	protein,	gamma	subunit	(TRAP-gamma)
DEAD	PF00270.24	gi|118575386|ref|YP_875129.1|	-	5.1e-29	100.9	0.0	8.8e-29	100.1	0.0	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DUF1998	PF09369.5	gi|118575386|ref|YP_875129.1|	-	5.6e-11	42.8	0.5	2.3e-10	40.8	0.3	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.26	gi|118575386|ref|YP_875129.1|	-	1.2e-08	34.7	0.7	4.6e-08	32.8	0.1	2.3	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|118575386|ref|YP_875129.1|	-	1.5e-05	23.9	0.0	2.1e-05	23.4	0.0	1.1	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
ResIII	PF04851.10	gi|118575386|ref|YP_875129.1|	-	0.0079	16.0	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Zn-ribbon_8	PF09723.5	gi|118575387|ref|YP_875130.1|	-	0.033	14.1	2.1	0.41	10.6	0.0	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|118575387|ref|YP_875130.1|	-	0.053	13.3	3.0	0.11	12.3	2.0	1.6	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|118575387|ref|YP_875130.1|	-	0.19	12.1	0.9	19	5.7	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-C2H2_6	PF13912.1	gi|118575387|ref|YP_875130.1|	-	1.2	9.1	4.1	1.8	8.5	0.3	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Topoisom_I_N	PF02919.10	gi|118575388|ref|YP_875131.1|	-	6.3e-67	225.0	8.4	6.3e-67	225.0	5.8	2.2	2	0	0	2	2	2	1	Eukaryotic	DNA	topoisomerase	I,	DNA	binding	fragment
Topoisom_I	PF01028.15	gi|118575388|ref|YP_875131.1|	-	5.8e-63	212.1	10.8	1.1e-62	211.2	7.5	1.3	1	0	0	1	1	1	1	Eukaryotic	DNA	topoisomerase	I,	catalytic	core
Topo_C_assoc	PF14370.1	gi|118575388|ref|YP_875131.1|	-	6.3e-21	73.8	1.2	6.3e-21	73.8	0.9	3.4	3	0	0	3	3	3	1	C-terminal	topoisomerase	domain
Transglut_core2	PF13369.1	gi|118575391|ref|YP_875134.1|	-	1.6e-40	138.0	0.0	2.6e-40	137.4	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
TPR_9	PF13371.1	gi|118575391|ref|YP_875134.1|	-	4.1e-17	61.7	0.0	8.3e-17	60.8	0.0	1.5	1	0	0	1	1	1	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|118575391|ref|YP_875134.1|	-	0.00018	21.2	0.2	0.09	12.6	0.0	2.5	2	0	0	2	2	2	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_2	PF07719.12	gi|118575391|ref|YP_875134.1|	-	0.00036	20.2	0.1	0.4	10.7	0.0	2.7	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118575391|ref|YP_875134.1|	-	0.0014	18.2	0.1	0.0041	16.7	0.1	1.8	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118575391|ref|YP_875134.1|	-	0.0033	17.9	0.0	0.52	11.0	0.0	2.8	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118575391|ref|YP_875134.1|	-	0.015	14.8	0.2	1.1	8.9	0.0	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|118575391|ref|YP_875134.1|	-	0.048	13.2	0.1	0.15	11.7	0.1	1.8	1	1	0	1	1	1	0	TPR	repeat
TPR_12	PF13424.1	gi|118575391|ref|YP_875134.1|	-	0.17	11.8	2.5	2.6	8.0	0.0	2.4	2	1	0	3	3	3	0	Tetratricopeptide	repeat
TSC22	PF01166.13	gi|118575392|ref|YP_875135.1|	-	0.021	14.7	0.5	0.032	14.1	0.3	1.3	1	0	0	1	1	1	0	TSC-22/dip/bun	family
Runt	PF00853.14	gi|118575392|ref|YP_875135.1|	-	0.11	11.9	0.0	0.13	11.7	0.0	1.1	1	0	0	1	1	1	0	Runt	domain
Prefoldin_2	PF01920.15	gi|118575392|ref|YP_875135.1|	-	0.11	12.2	0.1	0.15	11.8	0.1	1.1	1	0	0	1	1	1	0	Prefoldin	subunit
DivIC	PF04977.10	gi|118575392|ref|YP_875135.1|	-	0.2	11.1	1.4	0.47	9.9	1.0	1.6	1	1	0	1	1	1	0	Septum	formation	initiator
MIP	PF00230.15	gi|118575394|ref|YP_875137.1|	-	2.6e-47	161.2	19.1	3.4e-47	160.8	13.2	1.0	1	0	0	1	1	1	1	Major	intrinsic	protein
AhpC-TSA	PF00578.16	gi|118575395|ref|YP_875138.1|	-	4e-38	129.8	0.1	4.5e-38	129.7	0.1	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|118575395|ref|YP_875138.1|	-	3.1e-26	91.6	0.1	3.6e-26	91.4	0.1	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA_2	PF13911.1	gi|118575395|ref|YP_875138.1|	-	1.9e-05	24.5	0.0	3.9e-05	23.5	0.0	1.4	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF899	PF05988.7	gi|118575395|ref|YP_875138.1|	-	6.6e-05	22.4	0.0	7.4e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
SCO1-SenC	PF02630.9	gi|118575395|ref|YP_875138.1|	-	0.045	13.3	0.1	0.065	12.8	0.1	1.4	1	1	0	1	1	1	0	SCO1/SenC
zf-C2H2_3	PF13878.1	gi|118575395|ref|YP_875138.1|	-	0.069	12.7	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	zinc-finger	of	acetyl-transferase	ESCO
M	PF02370.11	gi|118575396|ref|YP_875139.1|	-	0.025	14.8	0.4	0.025	14.8	0.3	3.1	3	0	0	3	3	3	0	M	protein	repeat
AAA_12	PF13087.1	gi|118575397|ref|YP_875140.1|	-	2.3e-21	76.0	0.0	1.7e-20	73.2	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|118575397|ref|YP_875140.1|	-	5e-18	65.5	0.0	1.1e-07	31.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|118575397|ref|YP_875140.1|	-	2.7e-12	46.2	0.1	7.2e-12	44.9	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|118575397|ref|YP_875140.1|	-	2.6e-07	30.4	0.0	0.012	15.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
DUF2075	PF09848.4	gi|118575397|ref|YP_875140.1|	-	8e-06	25.0	0.0	0.015	14.3	0.0	3.6	3	0	0	3	3	3	1	Uncharacterized	conserved	protein	(DUF2075)
DUF559	PF04480.7	gi|118575397|ref|YP_875140.1|	-	1.5e-05	24.6	0.0	3.9e-05	23.2	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF559)
Viral_helicase1	PF01443.13	gi|118575397|ref|YP_875140.1|	-	5.9e-05	22.6	0.0	0.14	11.6	0.0	3.2	3	0	0	3	3	3	1	Viral	(Superfamily	1)	RNA	helicase
AAA_22	PF13401.1	gi|118575397|ref|YP_875140.1|	-	0.00022	21.3	0.1	0.13	12.4	0.0	2.9	3	0	0	3	3	2	1	AAA	domain
AAA_10	PF12846.2	gi|118575397|ref|YP_875140.1|	-	0.00094	18.7	2.0	0.44	9.9	0.0	3.4	2	1	1	3	3	3	1	AAA-like	domain
AAA_16	PF13191.1	gi|118575397|ref|YP_875140.1|	-	0.0028	17.6	0.1	0.021	14.7	0.0	2.5	2	0	0	2	2	2	1	AAA	ATPase	domain
ResIII	PF04851.10	gi|118575397|ref|YP_875140.1|	-	0.0098	15.7	0.1	2.9	7.6	0.0	3.2	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
UvrD_C_2	PF13538.1	gi|118575397|ref|YP_875140.1|	-	0.012	15.7	0.0	0.045	13.8	0.0	2.0	1	0	0	1	1	1	0	UvrD-like	helicase	C-terminal	domain
AAA_25	PF13481.1	gi|118575397|ref|YP_875140.1|	-	0.014	14.7	0.0	0.047	13.0	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
UvrD-helicase	PF00580.16	gi|118575397|ref|YP_875140.1|	-	0.015	14.5	0.0	1.7	7.8	0.0	2.7	3	0	0	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
Helicase_RecD	PF05127.9	gi|118575397|ref|YP_875140.1|	-	0.016	14.8	0.0	0.64	9.6	0.0	2.4	2	0	0	2	2	2	0	Helicase
PhoH	PF02562.11	gi|118575397|ref|YP_875140.1|	-	0.016	14.4	0.0	1.9	7.6	0.0	2.5	2	0	0	2	2	2	0	PhoH-like	protein
FtsK_SpoIIIE	PF01580.13	gi|118575397|ref|YP_875140.1|	-	0.021	14.3	0.1	0.088	12.2	0.0	2.0	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
Herpes_ori_bp	PF02399.10	gi|118575397|ref|YP_875140.1|	-	0.025	12.5	0.0	0.037	11.9	0.0	1.1	1	0	0	1	1	1	0	Origin	of	replication	binding	protein
AAA_33	PF13671.1	gi|118575397|ref|YP_875140.1|	-	0.026	14.4	0.0	0.063	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Adeno_IVa2	PF02456.10	gi|118575397|ref|YP_875140.1|	-	0.042	12.4	0.0	0.14	10.7	0.0	1.7	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
AAA_17	PF13207.1	gi|118575397|ref|YP_875140.1|	-	0.048	14.4	0.1	1.4	9.7	0.0	3.1	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|118575397|ref|YP_875140.1|	-	0.055	12.8	0.0	0.21	10.9	0.0	1.9	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
RNA12	PF10443.4	gi|118575397|ref|YP_875140.1|	-	0.069	11.6	0.0	0.13	10.7	0.0	1.4	1	0	0	1	1	1	0	RNA12	protein
DAP3	PF10236.4	gi|118575397|ref|YP_875140.1|	-	0.081	11.8	0.0	0.15	10.9	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
DEAD	PF00270.24	gi|118575397|ref|YP_875140.1|	-	0.18	11.3	0.0	0.64	9.4	0.0	1.9	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
Zot	PF05707.7	gi|118575397|ref|YP_875140.1|	-	0.18	11.2	0.9	5.7	6.3	0.0	2.8	3	0	0	3	3	3	0	Zonular	occludens	toxin	(Zot)
HNH_4	PF13395.1	gi|118575398|ref|YP_875141.1|	-	1.7e-07	30.7	0.9	4.2e-07	29.5	0.6	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH	PF01844.18	gi|118575398|ref|YP_875141.1|	-	4.9e-06	26.3	3.1	9.6e-06	25.3	2.2	1.5	1	0	0	1	1	1	1	HNH	endonuclease
DUF2746	PF10874.3	gi|118575398|ref|YP_875141.1|	-	0.04	14.1	0.2	0.084	13.0	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2746)
Acetyltransf_1	PF00583.19	gi|118575399|ref|YP_875142.1|	-	9e-08	32.0	1.6	9.2e-08	32.0	0.1	1.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|118575399|ref|YP_875142.1|	-	0.0002	21.4	0.0	0.00031	20.8	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|118575399|ref|YP_875142.1|	-	0.00031	20.9	0.1	0.00054	20.1	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|118575399|ref|YP_875142.1|	-	0.0044	17.1	0.7	0.0077	16.3	0.0	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|118575399|ref|YP_875142.1|	-	0.1	12.3	0.0	0.17	11.6	0.0	1.3	1	0	0	1	1	1	0	FR47-like	protein
UbiD	PF01977.11	gi|118575402|ref|YP_875145.1|	-	1.2e-155	517.9	0.8	1.4e-155	517.7	0.6	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Radical_SAM	PF04055.16	gi|118575403|ref|YP_875146.1|	-	3.3e-17	63.1	0.0	6.7e-17	62.1	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
DeoC	PF01791.4	gi|118575404|ref|YP_875147.1|	-	6.8e-47	159.7	0.0	8e-47	159.5	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
PEP_mutase	PF13714.1	gi|118575404|ref|YP_875147.1|	-	0.062	12.5	0.0	0.77	8.9	0.0	2.0	1	1	1	2	2	2	0	Phosphoenolpyruvate	phosphomutase
OMPdecase	PF00215.19	gi|118575404|ref|YP_875147.1|	-	0.073	12.4	0.0	0.12	11.8	0.0	1.4	1	1	0	1	1	1	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
DGF-1_5	PF11038.3	gi|118575404|ref|YP_875147.1|	-	0.16	11.1	1.0	0.16	11.1	0.1	1.5	2	0	0	2	2	2	0	Dispersed	gene	family	protein	1	of	Trypanosoma	cruzi	region	5
DHQS	PF01959.11	gi|118575405|ref|YP_875148.1|	-	6e-114	380.4	0.2	7.2e-114	380.1	0.1	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase	(EC	4.6.1.3)
CppA_N	PF14506.1	gi|118575405|ref|YP_875148.1|	-	0.043	13.4	0.0	0.13	11.9	0.0	1.7	2	0	0	2	2	2	0	CppA	N-terminal
DHquinase_I	PF01487.10	gi|118575406|ref|YP_875149.1|	-	2e-47	161.7	0.0	2.2e-47	161.5	0.0	1.0	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
Shikimate_dh_N	PF08501.6	gi|118575407|ref|YP_875150.1|	-	1.7e-27	95.2	0.0	3.7e-27	94.1	0.0	1.6	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|118575407|ref|YP_875150.1|	-	1.2e-12	48.0	0.1	1.8e-12	47.4	0.0	1.2	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Saccharop_dh	PF03435.13	gi|118575407|ref|YP_875150.1|	-	3.1e-05	23.1	0.3	4.4e-05	22.6	0.2	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
adh_short	PF00106.20	gi|118575407|ref|YP_875150.1|	-	0.013	15.4	3.1	0.02	14.8	2.1	1.2	1	0	0	1	1	1	0	short	chain	dehydrogenase
Herpes_IE1	PF07340.6	gi|118575407|ref|YP_875150.1|	-	0.042	12.3	0.0	0.062	11.7	0.0	1.1	1	0	0	1	1	1	0	Cytomegalovirus	IE1	protein
THF_DHG_CYH_C	PF02882.14	gi|118575407|ref|YP_875150.1|	-	0.043	12.8	0.1	20	4.1	0.0	3.0	2	1	1	3	3	3	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
KR	PF08659.5	gi|118575407|ref|YP_875150.1|	-	0.084	12.5	1.2	0.15	11.6	0.8	1.4	1	0	0	1	1	1	0	KR	domain
F420_oxidored	PF03807.12	gi|118575407|ref|YP_875150.1|	-	0.086	13.2	0.3	0.16	12.4	0.2	1.4	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|118575407|ref|YP_875150.1|	-	0.1	12.3	0.3	0.23	11.2	0.2	1.6	1	0	0	1	1	1	0	ThiF	family
GHMP_kinases_N	PF00288.21	gi|118575408|ref|YP_875151.1|	-	4.5e-11	42.6	0.7	9.9e-11	41.5	0.5	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|118575408|ref|YP_875151.1|	-	0.0032	17.6	0.3	0.012	15.7	0.2	2.0	1	1	1	2	2	2	1	GHMP	kinases	C	terminal
DUF2613	PF11021.3	gi|118575408|ref|YP_875151.1|	-	6.6	6.5	7.8	1.1	8.9	1.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2613)
EPSP_synthase	PF00275.15	gi|118575409|ref|YP_875152.1|	-	2.6e-90	302.8	0.0	2.9e-90	302.7	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DUF1876	PF08962.6	gi|118575409|ref|YP_875152.1|	-	0.008	15.9	0.1	1.5	8.6	0.1	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1876)
DUF3482	PF11981.3	gi|118575409|ref|YP_875152.1|	-	0.11	11.7	0.1	0.18	11.0	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3482)
DUF1801	PF08818.6	gi|118575410|ref|YP_875153.1|	-	0.1	12.7	0.0	0.23	11.5	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DU1801)
Helicase_C_2	PF13307.1	gi|118575412|ref|YP_875155.1|	-	1.9e-21	76.7	0.0	1.5e-20	73.8	0.0	2.0	2	0	0	2	2	2	1	Helicase	C-terminal	domain
ResIII	PF04851.10	gi|118575412|ref|YP_875155.1|	-	3.2e-07	30.3	0.0	5.3e-06	26.3	0.0	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD_2	PF06733.10	gi|118575412|ref|YP_875155.1|	-	2.4e-06	27.0	0.3	7.1e-06	25.5	0.2	1.8	1	1	0	1	1	1	1	DEAD_2
DEAD	PF00270.24	gi|118575412|ref|YP_875155.1|	-	3.9e-05	23.2	0.0	0.016	14.6	0.0	2.7	3	0	0	3	3	3	2	DEAD/DEAH	box	helicase
HD	PF01966.17	gi|118575413|ref|YP_875156.1|	-	3.1e-14	53.0	0.0	7.2e-14	51.8	0.0	1.6	1	0	0	1	1	1	1	HD	domain
TraI_2	PF07514.6	gi|118575413|ref|YP_875156.1|	-	8.6e-07	28.0	0.0	3e-06	26.2	0.0	1.7	2	0	0	2	2	2	1	Putative	helicase
tRNA_anti-codon	PF01336.20	gi|118575413|ref|YP_875156.1|	-	2e-06	27.5	0.0	4.6e-06	26.3	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
HD_3	PF13023.1	gi|118575413|ref|YP_875156.1|	-	0.0021	17.8	0.4	0.0067	16.1	0.0	1.9	2	0	0	2	2	2	1	HD	domain
HDOD	PF08668.7	gi|118575413|ref|YP_875156.1|	-	0.013	14.8	0.1	0.028	13.6	0.0	1.5	2	0	0	2	2	2	0	HDOD	domain
DUF643	PF04867.7	gi|118575413|ref|YP_875156.1|	-	0.082	13.3	0.0	0.18	12.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF643)
DUF1574	PF07611.6	gi|118575415|ref|YP_875158.1|	-	0.066	12.0	3.4	0.088	11.6	0.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1574)
Chorismate_synt	PF01264.16	gi|118575416|ref|YP_875159.1|	-	8.2e-136	452.0	0.1	9.2e-136	451.8	0.1	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Aminotran_1_2	PF00155.16	gi|118575417|ref|YP_875160.1|	-	3e-47	161.3	0.0	3.7e-47	161.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
CM_2	PF01817.16	gi|118575417|ref|YP_875160.1|	-	4.1e-09	36.4	0.5	7e-09	35.6	0.4	1.4	1	0	0	1	1	1	1	Chorismate	mutase	type	II
DegT_DnrJ_EryC1	PF01041.12	gi|118575417|ref|YP_875160.1|	-	5.2e-08	32.3	0.0	8.5e-08	31.6	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|118575417|ref|YP_875160.1|	-	5.1e-05	22.1	0.0	0.00011	21.1	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|118575417|ref|YP_875160.1|	-	0.00046	18.5	0.0	0.00068	18.0	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|118575417|ref|YP_875160.1|	-	0.0037	16.4	0.0	0.0066	15.6	0.0	1.4	1	0	0	1	1	1	1	Beta-eliminating	lyase
PDH	PF02153.12	gi|118575418|ref|YP_875161.1|	-	6e-25	87.5	0.0	7.2e-25	87.3	0.0	1.1	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.10	gi|118575418|ref|YP_875161.1|	-	5.2e-06	26.3	0.0	1.1e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|118575418|ref|YP_875161.1|	-	5.2e-05	22.9	0.3	0.00019	21.1	0.1	2.0	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|118575418|ref|YP_875161.1|	-	0.00017	20.7	0.0	0.00031	19.9	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|118575418|ref|YP_875161.1|	-	0.0012	19.2	0.0	0.0046	17.3	0.0	2.1	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|118575418|ref|YP_875161.1|	-	0.0062	16.2	0.6	3.3	7.4	0.2	2.7	2	1	1	3	3	3	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
CoA_binding_2	PF13380.1	gi|118575418|ref|YP_875161.1|	-	0.0096	16.0	0.0	0.021	14.9	0.0	1.6	1	0	0	1	1	1	1	CoA	binding	domain
NmrA	PF05368.8	gi|118575418|ref|YP_875161.1|	-	0.049	12.8	0.6	0.55	9.4	0.0	2.7	3	1	0	3	3	3	0	NmrA-like	family
ApbA	PF02558.11	gi|118575418|ref|YP_875161.1|	-	0.09	12.2	0.1	0.88	9.0	0.0	2.2	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DAO	PF01266.19	gi|118575418|ref|YP_875161.1|	-	0.16	10.8	0.1	0.9	8.3	0.0	2.0	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
NUDIX	PF00293.23	gi|118575419|ref|YP_875162.1|	-	2.7e-05	23.8	0.1	3.5e-05	23.4	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
ThiC	PF01964.13	gi|118575420|ref|YP_875163.1|	-	1.3e-175	583.9	0.3	1.5e-175	583.7	0.2	1.0	1	0	0	1	1	1	1	ThiC	family
Phos_pyr_kin	PF08543.7	gi|118575425|ref|YP_875168.1|	-	1.3e-67	227.5	0.9	9.4e-67	224.7	0.6	1.9	2	0	0	2	2	2	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|118575425|ref|YP_875168.1|	-	2.5e-56	189.7	0.0	3.5e-56	189.2	0.0	1.2	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|118575425|ref|YP_875168.1|	-	7.3e-07	28.6	0.8	1.2e-06	27.9	0.6	1.3	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
HK	PF02110.10	gi|118575425|ref|YP_875168.1|	-	8.5e-06	25.1	2.3	8.5e-06	25.1	1.6	1.7	1	1	1	2	2	2	1	Hydroxyethylthiazole	kinase	family
DUF456	PF04306.8	gi|118575426|ref|YP_875169.1|	-	0.1	12.6	8.6	0.068	13.2	4.6	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF456)
Flp_Fap	PF04964.9	gi|118575426|ref|YP_875169.1|	-	0.35	10.4	2.3	0.8	9.3	0.0	2.4	3	0	0	3	3	3	0	Flp/Fap	pilin	component
Thioredoxin_4	PF13462.1	gi|118575427|ref|YP_875170.1|	-	1.6e-33	116.0	0.0	1.9e-33	115.7	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|118575427|ref|YP_875170.1|	-	3.2e-15	56.2	0.3	8.2e-13	48.3	0.0	2.1	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|118575427|ref|YP_875170.1|	-	3.4e-06	27.2	0.0	6e-06	26.4	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|118575427|ref|YP_875170.1|	-	0.024	14.2	0.0	0.063	12.9	0.0	1.6	2	0	0	2	2	2	0	Thioredoxin
Thioredoxin_8	PF13905.1	gi|118575427|ref|YP_875170.1|	-	0.05	13.7	0.0	3.6	7.7	0.0	2.2	2	0	0	2	2	2	0	Thioredoxin-like
Thioredoxin_5	PF13743.1	gi|118575427|ref|YP_875170.1|	-	0.1	12.1	0.0	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	Thioredoxin
Adeno_shaft	PF00608.12	gi|118575430|ref|YP_875173.1|	-	0.044	13.3	0.0	0.13	11.8	0.0	1.8	2	0	0	2	2	2	0	Adenoviral	fibre	protein	(repeat/shaft	region)
Snf7	PF03357.16	gi|118575431|ref|YP_875174.1|	-	0.3	10.4	2.3	0.58	9.5	0.1	2.0	2	0	0	2	2	2	0	Snf7
DUF1625	PF07787.7	gi|118575432|ref|YP_875175.1|	-	0.04	13.1	0.0	0.049	12.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
CBFB_NFYA	PF02045.10	gi|118575432|ref|YP_875175.1|	-	0.052	14.0	0.2	0.095	13.2	0.1	1.4	1	0	0	1	1	1	0	CCAAT-binding	transcription	factor	(CBF-B/NF-YA)	subunit	B
NAD_binding_2	PF03446.10	gi|118575434|ref|YP_875177.1|	-	1.1e-34	119.6	0.9	1.5e-34	119.2	0.6	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|118575434|ref|YP_875177.1|	-	6e-20	71.5	0.0	1.1e-19	70.6	0.0	1.5	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|118575434|ref|YP_875177.1|	-	0.015	14.4	0.0	0.15	11.1	0.0	2.1	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|118575434|ref|YP_875177.1|	-	0.024	14.0	0.0	0.036	13.5	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Peripla_BP_4	PF13407.1	gi|118575434|ref|YP_875177.1|	-	0.03	13.6	0.5	0.18	11.1	0.1	2.0	1	1	1	2	2	2	0	Periplasmic	binding	protein	domain
Cob_adeno_trans	PF01923.13	gi|118575435|ref|YP_875178.1|	-	7e-58	195.0	0.0	8.3e-58	194.7	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
zf-C2H2_4	PF13894.1	gi|118575436|ref|YP_875179.1|	-	2.5e-05	24.2	0.2	3e-05	24.0	0.1	1.1	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|118575436|ref|YP_875179.1|	-	5.7e-05	23.2	0.5	7.1e-05	22.9	0.3	1.2	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
zf-Di19	PF05605.7	gi|118575436|ref|YP_875179.1|	-	0.00036	20.5	0.2	0.00041	20.4	0.1	1.1	1	0	0	1	1	1	1	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_2	PF12756.2	gi|118575436|ref|YP_875179.1|	-	0.0063	16.6	0.0	0.0063	16.6	0.0	1.0	1	0	0	1	1	1	1	C2H2	type	zinc-finger	(2	copies)
zf-CHCC	PF10276.4	gi|118575436|ref|YP_875179.1|	-	0.11	12.3	0.1	0.15	11.9	0.1	1.3	1	0	0	1	1	1	0	Zinc-finger	domain
zf-C2H2_jaz	PF12171.3	gi|118575436|ref|YP_875179.1|	-	0.13	12.4	0.2	0.16	12.1	0.1	1.2	1	0	0	1	1	1	0	Zinc-finger	double-stranded	RNA-binding
zf-H2C2_2	PF13465.1	gi|118575436|ref|YP_875179.1|	-	0.13	12.5	3.2	7.1	7.1	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
HD_3	PF13023.1	gi|118575437|ref|YP_875180.1|	-	1.6e-37	128.8	0.0	2.4e-37	128.2	0.0	1.2	1	0	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|118575437|ref|YP_875180.1|	-	0.00025	21.0	0.0	0.0005	20.0	0.0	1.6	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|118575437|ref|YP_875180.1|	-	0.018	14.3	0.0	0.031	13.5	0.0	1.3	1	0	0	1	1	1	0	HDOD	domain
Saccharop_dh_N	PF04455.7	gi|118575439|ref|YP_875182.1|	-	7.2e-35	119.2	0.0	1.1e-34	118.6	0.0	1.2	1	0	0	1	1	1	1	LOR/SDH	bifunctional	enzyme	conserved	region
MEKHLA	PF08670.6	gi|118575439|ref|YP_875182.1|	-	0.07	12.6	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	MEKHLA	domain
DUF1188	PF06690.6	gi|118575440|ref|YP_875183.1|	-	0.03	13.4	0.0	0.044	12.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1188)
FAE1_CUT1_RppA	PF08392.7	gi|118575440|ref|YP_875183.1|	-	0.097	11.7	0.9	0.96	8.4	0.1	2.0	1	1	1	2	2	2	0	FAE1/Type	III	polyketide	synthase-like	protein
GatB_N	PF02934.10	gi|118575441|ref|YP_875184.1|	-	2.6e-97	325.1	0.0	3.3e-97	324.8	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|118575441|ref|YP_875184.1|	-	4.9e-27	94.4	0.0	7.2e-27	93.9	0.0	1.2	1	0	0	1	1	1	1	GatB	domain
Amidase	PF01425.16	gi|118575442|ref|YP_875185.1|	-	3.1e-133	444.8	0.2	3.8e-133	444.5	0.1	1.0	1	0	0	1	1	1	1	Amidase
dUTPase	PF00692.14	gi|118575443|ref|YP_875186.1|	-	0.11	12.0	0.0	0.18	11.2	0.0	1.4	2	0	0	2	2	2	0	dUTPase
tRNA-synt_2	PF00152.15	gi|118575444|ref|YP_875187.1|	-	3.5e-81	272.5	0.0	8e-81	271.4	0.0	1.5	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|118575444|ref|YP_875187.1|	-	1.8e-15	56.5	0.0	3e-15	55.8	0.0	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|118575444|ref|YP_875187.1|	-	0.01	15.0	0.1	0.087	12.0	0.0	2.3	3	0	0	3	3	3	1	tRNA	synthetases	class	II	core	domain	(F)
DUF1297	PF06973.7	gi|118575445|ref|YP_875188.1|	-	3.7e-70	235.0	0.0	4.6e-70	234.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|118575445|ref|YP_875188.1|	-	1.4e-44	150.8	0.0	2.3e-44	150.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|118575445|ref|YP_875188.1|	-	0.0012	18.6	0.0	0.018	14.7	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
DUF2675	PF11247.3	gi|118575448|ref|YP_875191.1|	-	0.019	15.0	0.0	0.073	13.1	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2675)
KNTase_C	PF07827.6	gi|118575450|ref|YP_875193.1|	-	0.051	13.3	0.0	0.071	12.8	0.0	1.2	1	0	0	1	1	1	0	KNTase	C-terminal	domain
Asparaginase_2	PF01112.13	gi|118575451|ref|YP_875194.1|	-	1.9e-52	177.9	18.3	8.5e-27	93.7	0.4	2.0	1	1	1	2	2	2	2	Asparaginase
Rad51	PF08423.6	gi|118575453|ref|YP_875196.1|	-	6.5e-98	326.7	0.1	8.3e-98	326.3	0.1	1.1	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|118575453|ref|YP_875196.1|	-	6.3e-12	45.2	0.0	1e-11	44.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|118575453|ref|YP_875196.1|	-	2.8e-10	39.7	0.1	4.4e-10	39.1	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|118575453|ref|YP_875196.1|	-	2.5e-08	33.3	0.4	4.7e-08	32.4	0.3	1.6	1	1	0	1	1	1	1	KaiC
HHH_5	PF14520.1	gi|118575453|ref|YP_875196.1|	-	0.00012	22.1	0.1	0.00044	20.3	0.0	2.0	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
IMS_HHH	PF11798.3	gi|118575453|ref|YP_875196.1|	-	0.02	14.9	0.0	0.06	13.4	0.0	1.9	1	0	0	1	1	1	0	IMS	family	HHH	motif
ATP_bind_1	PF03029.12	gi|118575453|ref|YP_875196.1|	-	0.13	11.7	0.3	0.22	11.0	0.2	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
OAD_gamma	PF04277.8	gi|118575453|ref|YP_875196.1|	-	2	8.8	4.1	4	7.8	2.8	1.5	1	0	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
tRNA-Thr_ED	PF08915.6	gi|118575454|ref|YP_875197.1|	-	6.5e-43	146.0	0.0	9.8e-43	145.4	0.0	1.3	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|118575454|ref|YP_875197.1|	-	3.9e-25	87.6	0.3	1.9e-24	85.3	0.3	2.0	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|118575454|ref|YP_875197.1|	-	1.4e-23	83.3	0.1	2.2e-23	82.7	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DS	PF01916.12	gi|118575456|ref|YP_875199.1|	-	3.1e-55	187.3	0.0	3.7e-55	187.1	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Ribosomal_S25	PF03297.10	gi|118575458|ref|YP_875201.1|	-	0.0029	17.5	0.3	0.0042	17.0	0.2	1.1	1	0	0	1	1	1	1	S25	ribosomal	protein
Carb_kinase	PF01256.12	gi|118575460|ref|YP_875203.1|	-	7.4e-42	143.2	1.0	9.1e-42	142.9	0.7	1.0	1	0	0	1	1	1	1	Carbohydrate	kinase
HK	PF02110.10	gi|118575460|ref|YP_875203.1|	-	3.5e-09	36.2	0.1	1.1e-08	34.5	0.0	1.8	1	1	1	2	2	2	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|118575460|ref|YP_875203.1|	-	0.0004	19.6	0.0	0.0006	19.0	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Peptidase_M20	PF01546.23	gi|118575461|ref|YP_875204.1|	-	6.1e-22	78.0	0.0	7.2e-22	77.8	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|118575461|ref|YP_875204.1|	-	7.2e-14	51.4	0.0	1.2e-13	50.7	0.0	1.3	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M20	PF01546.23	gi|118575462|ref|YP_875205.1|	-	0.007	15.8	0.0	0.007	15.8	0.0	1.0	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
DoxX	PF07681.7	gi|118575463|ref|YP_875206.1|	-	3e-15	56.3	8.1	6.1e-15	55.4	5.6	1.5	1	0	0	1	1	1	1	DoxX
DoxD	PF04173.8	gi|118575463|ref|YP_875206.1|	-	7.7e-06	25.6	5.0	7.7e-06	25.6	3.5	1.7	1	1	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX_2	PF13564.1	gi|118575463|ref|YP_875206.1|	-	0.00044	20.1	7.2	0.00062	19.6	5.0	1.3	1	1	0	1	1	1	1	DoxX-like	family
DUF4225	PF13988.1	gi|118575463|ref|YP_875206.1|	-	5.7	6.3	7.7	9	5.7	2.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4225)
Proteasome	PF00227.21	gi|118575464|ref|YP_875207.1|	-	6.6e-44	149.4	0.0	7.3e-44	149.3	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
PUA	PF01472.15	gi|118575465|ref|YP_875208.1|	-	1e-14	54.0	0.1	1.4e-14	53.5	0.1	1.2	1	0	0	1	1	1	1	PUA	domain
Homoserine_dh	PF00742.14	gi|118575466|ref|YP_875209.1|	-	9.5e-50	168.7	0.1	1.3e-49	168.2	0.0	1.2	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|118575466|ref|YP_875209.1|	-	2.5e-06	27.8	0.0	9.9e-06	25.9	0.0	2.0	1	1	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|118575466|ref|YP_875209.1|	-	0.0052	16.3	0.0	0.013	15.0	0.0	1.6	1	1	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
TrkA_N	PF02254.13	gi|118575466|ref|YP_875209.1|	-	0.041	13.8	0.7	0.079	12.9	0.1	1.8	2	0	0	2	2	2	0	TrkA-N	domain
L_protein_N	PF15518.1	gi|118575467|ref|YP_875210.1|	-	0.017	14.4	0.0	0.026	13.9	0.0	1.2	1	0	0	1	1	1	0	L	protein	N-terminus
SelR	PF01641.13	gi|118575468|ref|YP_875211.1|	-	7e-20	70.9	0.0	7.6e-20	70.8	0.0	1.2	1	0	0	1	1	1	1	SelR	domain
Yippee-Mis18	PF03226.9	gi|118575468|ref|YP_875211.1|	-	0.14	12.1	0.0	0.22	11.5	0.0	1.2	1	0	0	1	1	1	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
DUF3716	PF12511.3	gi|118575468|ref|YP_875211.1|	-	0.21	11.2	1.6	0.28	10.8	0.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3716)
Thy1	PF02511.10	gi|118575469|ref|YP_875212.1|	-	8.5e-29	100.2	0.0	4.5e-16	58.7	0.0	2.9	2	1	0	2	2	2	2	Thymidylate	synthase	complementing	protein
PRC	PF05239.11	gi|118575471|ref|YP_875214.1|	-	0.001	18.8	0.9	0.0019	18.0	0.6	1.3	1	0	0	1	1	1	1	PRC-barrel	domain
MerR-DNA-bind	PF09278.6	gi|118575471|ref|YP_875214.1|	-	0.14	12.5	4.8	3.9	7.9	1.5	3.1	2	1	0	2	2	2	0	MerR,	DNA	binding
FTA4	PF13093.1	gi|118575471|ref|YP_875214.1|	-	0.4	10.0	3.8	0.85	9.0	2.6	1.6	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
Methyltransf_18	PF12847.2	gi|118575472|ref|YP_875215.1|	-	0.0014	19.1	0.0	0.048	14.2	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118575472|ref|YP_875215.1|	-	0.0053	16.7	0.0	0.0085	16.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575472|ref|YP_875215.1|	-	0.054	13.0	0.0	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
XPG_I	PF00867.13	gi|118575473|ref|YP_875216.1|	-	7.9e-26	89.9	0.0	1.3e-25	89.2	0.0	1.3	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|118575473|ref|YP_875216.1|	-	1.7e-20	73.1	0.0	3.3e-20	72.2	0.0	1.4	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|118575473|ref|YP_875216.1|	-	0.00013	22.0	0.0	0.00028	21.0	0.0	1.5	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
TrbC	PF04956.8	gi|118575474|ref|YP_875217.1|	-	0.16	11.9	3.6	0.34	10.9	0.1	2.1	2	0	0	2	2	2	0	TrbC/VIRB2	family
CcoS	PF03597.10	gi|118575474|ref|YP_875217.1|	-	5.9	6.4	14.1	26	4.3	5.2	3.1	2	1	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
SPG48	PF14764.1	gi|118575475|ref|YP_875218.1|	-	0.045	12.2	0.1	0.054	11.9	0.1	1.0	1	0	0	1	1	1	0	AP-5	complex	subunit,	vesicle	trafficking
SoxY	PF13501.1	gi|118575475|ref|YP_875218.1|	-	0.066	13.2	0.0	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	Sulfur	oxidation	protein	SoxY
Transglut_core3	PF13471.1	gi|118575475|ref|YP_875218.1|	-	0.76	9.5	5.4	1.2	8.9	2.5	1.9	2	0	0	2	2	2	0	Transglutaminase-like	superfamily
Methyltransf_18	PF12847.2	gi|118575476|ref|YP_875219.1|	-	0.011	16.3	0.0	0.051	14.1	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
Trp_halogenase	PF04820.9	gi|118575477|ref|YP_875220.1|	-	5.2e-05	22.0	0.0	0.00021	20.0	0.0	1.8	1	1	0	1	1	1	1	Tryptophan	halogenase
NAD_binding_2	PF03446.10	gi|118575477|ref|YP_875220.1|	-	0.00061	19.6	0.0	0.0011	18.8	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.11	gi|118575477|ref|YP_875220.1|	-	0.00075	18.9	0.0	0.0016	17.9	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.9	gi|118575477|ref|YP_875220.1|	-	0.0054	16.6	0.0	0.013	15.3	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|118575477|ref|YP_875220.1|	-	0.023	14.0	0.0	0.039	13.3	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|118575477|ref|YP_875220.1|	-	0.03	13.4	0.0	0.049	12.7	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|118575477|ref|YP_875220.1|	-	0.039	13.9	0.0	0.064	13.2	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
DUF1330	PF07045.6	gi|118575477|ref|YP_875220.1|	-	0.041	13.7	0.4	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1330)
DAO	PF01266.19	gi|118575477|ref|YP_875220.1|	-	0.11	11.3	0.0	0.18	10.6	0.0	1.4	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
Shikimate_DH	PF01488.15	gi|118575477|ref|YP_875220.1|	-	0.12	12.4	0.0	0.26	11.3	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_10	PF13460.1	gi|118575477|ref|YP_875220.1|	-	0.14	12.1	0.0	0.27	11.2	0.0	1.5	1	0	0	1	1	1	0	NADH(P)-binding
DUF1330	PF07045.6	gi|118575479|ref|YP_875222.1|	-	0.093	12.5	0.0	0.19	11.5	0.0	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1330)
Prefoldin_2	PF01920.15	gi|118575481|ref|YP_875224.1|	-	0.024	14.3	0.4	0.064	13.0	0.2	1.6	1	0	0	1	1	1	0	Prefoldin	subunit
Phage_T4_gp36	PF03903.8	gi|118575482|ref|YP_875225.1|	-	0.09	12.8	0.1	0.1	12.6	0.0	1.0	1	0	0	1	1	1	0	Phage	T4	tail	fibre
Peptidase_M17	PF00883.16	gi|118575483|ref|YP_875226.1|	-	2.6e-113	378.0	0.0	3.2e-113	377.7	0.0	1.1	1	0	0	1	1	1	1	Cytosol	aminopeptidase	family,	catalytic	domain
Peptidase_M17_N	PF02789.12	gi|118575483|ref|YP_875226.1|	-	7.8e-16	57.9	7.1	9.7e-16	57.6	0.1	3.6	3	1	1	4	4	4	1	Cytosol	aminopeptidase	family,	N-terminal	domain
Radical_SAM	PF04055.16	gi|118575484|ref|YP_875227.1|	-	1.1e-13	51.6	0.1	2.6e-13	50.4	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|118575484|ref|YP_875227.1|	-	0.015	15.3	0.1	0.044	13.8	0.1	1.8	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
RadC	PF04002.10	gi|118575484|ref|YP_875227.1|	-	0.13	11.9	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	RadC-like	JAB	domain
Cyclase	PF04199.8	gi|118575485|ref|YP_875228.1|	-	2.8e-37	128.0	0.0	3.3e-37	127.7	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
ACT	PF01842.20	gi|118575485|ref|YP_875228.1|	-	0.021	14.3	0.1	0.036	13.5	0.1	1.4	1	0	0	1	1	1	0	ACT	domain
AsnC_trans_reg	PF01037.16	gi|118575486|ref|YP_875229.1|	-	1.1e-08	34.5	0.6	1.3e-08	34.4	0.4	1.2	1	0	0	1	1	1	1	AsnC	family
Aminotran_5	PF00266.14	gi|118575487|ref|YP_875230.1|	-	1.8e-60	204.6	0.0	2.1e-60	204.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|118575487|ref|YP_875230.1|	-	0.0024	16.9	0.0	0.0033	16.5	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.16	gi|118575487|ref|YP_875230.1|	-	0.017	14.0	0.0	0.029	13.3	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
Fer4	PF00037.22	gi|118575489|ref|YP_875232.1|	-	1.1e-10	40.5	12.1	3.8e-07	29.4	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|118575489|ref|YP_875232.1|	-	3.5e-09	36.9	4.6	4.8e-09	36.4	3.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|118575489|ref|YP_875232.1|	-	9.5e-08	31.6	10.5	0.00014	21.5	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|118575489|ref|YP_875232.1|	-	4.5e-07	29.5	3.8	8.9e-07	28.6	2.7	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118575489|ref|YP_875232.1|	-	8.2e-07	28.5	8.8	0.0039	17.0	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|118575489|ref|YP_875232.1|	-	8.5e-07	28.7	3.9	1.3e-06	28.1	2.7	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|118575489|ref|YP_875232.1|	-	1e-05	25.4	7.6	0.02	15.2	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|118575489|ref|YP_875232.1|	-	5.1e-05	23.4	9.3	0.00073	19.7	6.7	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|118575489|ref|YP_875232.1|	-	8.3e-05	22.9	5.4	0.1	12.9	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|118575489|ref|YP_875232.1|	-	0.00016	22.3	1.1	0.37	11.5	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|118575489|ref|YP_875232.1|	-	0.00016	21.9	13.2	0.043	14.3	2.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|118575489|ref|YP_875232.1|	-	0.00041	20.6	6.0	0.024	15.0	1.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|118575489|ref|YP_875232.1|	-	0.00045	20.1	4.3	0.0012	18.7	3.0	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|118575489|ref|YP_875232.1|	-	0.00049	20.6	9.5	0.028	14.9	6.6	2.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|118575489|ref|YP_875232.1|	-	0.0028	17.9	5.1	0.059	13.7	3.6	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AhpC-TSA	PF00578.16	gi|118575490|ref|YP_875233.1|	-	8.1e-20	70.7	0.0	1e-19	70.3	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|118575490|ref|YP_875233.1|	-	7.6e-14	51.4	0.0	9.1e-14	51.2	0.0	1.1	1	0	0	1	1	1	1	Redoxin
Thioredoxin_2	PF13098.1	gi|118575490|ref|YP_875233.1|	-	6e-07	29.6	0.0	8.3e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|118575490|ref|YP_875233.1|	-	6.5e-07	29.3	0.0	9.9e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|118575490|ref|YP_875233.1|	-	0.02	14.6	0.1	0.27	11.0	0.0	2.2	1	1	1	2	2	2	0	Thioredoxin	domain
PGM_PMM_I	PF02878.11	gi|118575491|ref|YP_875234.1|	-	3.6e-32	110.7	0.0	5.4e-32	110.1	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|118575491|ref|YP_875234.1|	-	1.5e-25	89.5	0.1	2.7e-25	88.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|118575491|ref|YP_875234.1|	-	1.3e-18	67.1	0.0	2e-18	66.4	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|118575491|ref|YP_875234.1|	-	4e-12	45.9	0.0	8.8e-12	44.8	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Ribosomal_L7Ae	PF01248.21	gi|118575492|ref|YP_875235.1|	-	1.6e-25	88.4	0.0	1.9e-25	88.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|118575492|ref|YP_875235.1|	-	0.089	12.5	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	PELOTA	RNA	binding	domain
Ribosomal_S28e	PF01200.13	gi|118575493|ref|YP_875236.1|	-	4.1e-30	103.3	5.6	4.4e-30	103.2	3.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Ribosomal_L24e	PF01246.15	gi|118575494|ref|YP_875237.1|	-	2.3e-17	62.6	2.0	2.3e-17	62.5	1.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|118575494|ref|YP_875237.1|	-	0.001	18.6	1.7	0.0019	17.8	1.2	1.5	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF581	PF04570.9	gi|118575494|ref|YP_875237.1|	-	0.0021	17.2	0.8	0.0034	16.6	0.5	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
DUF2256	PF10013.4	gi|118575494|ref|YP_875237.1|	-	0.037	13.7	6.5	1.6	8.5	0.1	2.9	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
DUF2175	PF09943.4	gi|118575494|ref|YP_875237.1|	-	0.057	13.4	0.3	0.066	13.2	0.2	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
SerH	PF06873.6	gi|118575494|ref|YP_875237.1|	-	0.099	11.2	0.1	0.1	11.2	0.0	1.0	1	0	0	1	1	1	0	Cell	surface	immobilisation	antigen	SerH
DUF329	PF03884.9	gi|118575494|ref|YP_875237.1|	-	2.5	7.7	4.9	9.1	5.9	3.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
NDK	PF00334.14	gi|118575495|ref|YP_875238.1|	-	8.5e-33	113.0	0.2	9.2e-33	112.8	0.1	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GTP_EFTU	PF00009.22	gi|118575496|ref|YP_875239.1|	-	6.6e-31	107.1	0.0	3.3e-30	104.9	0.0	2.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.3	gi|118575496|ref|YP_875239.1|	-	1.9e-20	72.7	0.1	4.3e-20	71.6	0.0	1.6	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D4	PF14578.1	gi|118575496|ref|YP_875239.1|	-	3.2e-10	39.4	1.8	5.1e-10	38.8	0.0	2.3	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|118575496|ref|YP_875239.1|	-	9.5e-07	28.7	0.0	5e-06	26.4	0.0	2.2	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|118575496|ref|YP_875239.1|	-	7.8e-05	23.1	0.0	0.0002	21.8	0.0	1.7	1	0	0	1	1	1	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|118575496|ref|YP_875239.1|	-	0.0023	17.7	0.2	0.1	12.4	0.1	2.4	2	0	0	2	2	2	1	Dynamin	family
ATP_bind_1	PF03029.12	gi|118575496|ref|YP_875239.1|	-	0.017	14.7	0.0	0.073	12.5	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Pyridox_oxidase	PF01243.15	gi|118575497|ref|YP_875240.1|	-	4.9e-05	23.2	0.0	7.3e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
DUF2255	PF10012.4	gi|118575497|ref|YP_875240.1|	-	0.096	12.6	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2255)
Asn_synthase	PF00733.16	gi|118575498|ref|YP_875241.1|	-	1.8e-33	116.0	0.1	1.6e-32	113.0	0.1	2.0	1	1	0	1	1	1	1	Asparagine	synthase
zinc_ribbon_2	PF13240.1	gi|118575498|ref|YP_875241.1|	-	0.00069	19.0	3.8	0.00069	19.0	2.7	1.7	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|118575498|ref|YP_875241.1|	-	0.00076	18.6	6.2	0.00076	18.6	4.3	1.7	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|118575498|ref|YP_875241.1|	-	0.00077	19.2	1.9	0.0015	18.2	1.3	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|118575498|ref|YP_875241.1|	-	0.0027	17.3	3.8	0.0052	16.4	2.6	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
NAD_synthase	PF02540.12	gi|118575498|ref|YP_875241.1|	-	0.021	13.7	0.0	0.031	13.1	0.0	1.2	1	0	0	1	1	1	0	NAD	synthase
HTH_3	PF01381.17	gi|118575499|ref|YP_875242.1|	-	0.015	15.1	0.1	0.13	12.1	0.0	2.2	1	1	1	2	2	2	0	Helix-turn-helix
HTH_19	PF12844.2	gi|118575499|ref|YP_875242.1|	-	0.074	13.1	0.0	0.3	11.1	0.0	2.0	1	1	0	1	1	1	0	Helix-turn-helix	domain
Rpr2	PF04032.11	gi|118575499|ref|YP_875242.1|	-	0.15	11.9	0.7	0.25	11.2	0.5	1.7	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Alba	PF01918.16	gi|118575500|ref|YP_875243.1|	-	8.7e-09	34.8	0.0	1.1e-08	34.5	0.0	1.2	1	0	0	1	1	1	1	Alba
RNA_pol_Rpb6	PF01192.17	gi|118575501|ref|YP_875244.1|	-	4.9e-12	45.4	0.0	1.1e-11	44.3	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
YqzH	PF14164.1	gi|118575501|ref|YP_875244.1|	-	0.12	12.2	0.2	0.22	11.4	0.1	1.4	1	0	0	1	1	1	0	YqzH-like	protein
Unstab_antitox	PF09720.5	gi|118575501|ref|YP_875244.1|	-	0.13	11.9	4.0	0.17	11.6	1.3	2.2	2	1	0	2	2	2	0	Putative	addiction	module	component
Cys_rich_CPCC	PF14206.1	gi|118575502|ref|YP_875245.1|	-	0.011	15.2	0.4	0.011	15.2	0.3	1.9	2	0	0	2	2	2	0	Cysteine-rich	CPCC
Abhydrolase_5	PF12695.2	gi|118575503|ref|YP_875246.1|	-	0.00017	21.3	0.1	0.00032	20.4	0.1	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_3	PF07859.8	gi|118575503|ref|YP_875246.1|	-	0.00038	20.0	0.1	0.00064	19.3	0.1	1.3	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
AXE1	PF05448.7	gi|118575503|ref|YP_875246.1|	-	0.27	9.7	0.3	0.44	8.9	0.2	1.2	1	0	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
F420_ligase	PF01996.11	gi|118575504|ref|YP_875247.1|	-	2.2e-57	193.7	0.0	2.6e-57	193.5	0.0	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Sda	PF08970.5	gi|118575506|ref|YP_875249.1|	-	0.29	10.6	3.8	0.37	10.2	0.1	2.4	2	1	0	2	2	2	0	Sporulation	inhibitor	A
TPP_enzyme_C	PF02775.16	gi|118575508|ref|YP_875251.1|	-	3e-29	101.5	0.4	4.9e-29	100.8	0.3	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|118575508|ref|YP_875251.1|	-	9.7e-09	35.0	0.1	0.00023	21.0	0.0	2.9	2	1	0	2	2	2	2	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.14	gi|118575509|ref|YP_875252.1|	-	3.7e-56	190.2	0.0	5.3e-56	189.6	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|118575509|ref|YP_875252.1|	-	2.8e-27	95.7	0.0	5e-27	94.9	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|118575509|ref|YP_875252.1|	-	0.0033	17.3	0.0	0.011	15.6	0.0	1.9	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|118575509|ref|YP_875252.1|	-	0.035	13.5	0.0	0.064	12.7	0.0	1.3	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
CXCXC	PF03128.9	gi|118575510|ref|YP_875253.1|	-	0.085	13.0	2.3	0.085	13.0	1.6	2.4	3	0	0	3	3	3	0	CXCXC	repeat
2-Hacid_dh_C	PF02826.14	gi|118575511|ref|YP_875254.1|	-	9.2e-60	200.8	0.0	1.2e-59	200.4	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|118575511|ref|YP_875254.1|	-	3.3e-28	97.7	0.0	3.8e-28	97.5	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|118575511|ref|YP_875254.1|	-	0.0054	16.5	0.2	0.024	14.4	0.1	2.0	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
MR_MLE_C	PF13378.1	gi|118575511|ref|YP_875254.1|	-	0.012	15.5	0.3	4	7.4	0.0	2.7	1	1	1	2	2	2	0	Enolase	C-terminal	domain-like
F420_oxidored	PF03807.12	gi|118575511|ref|YP_875254.1|	-	0.088	13.2	0.3	0.22	11.9	0.2	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
ChuX_HutX	PF06228.8	gi|118575512|ref|YP_875255.1|	-	1e-08	34.6	0.0	1.1e-08	34.5	0.0	1.0	1	0	0	1	1	1	1	Haem	utilisation	ChuX/HutX
HemS	PF05171.7	gi|118575512|ref|YP_875255.1|	-	3.8e-05	23.4	0.0	4.6e-05	23.2	0.0	1.1	1	0	0	1	1	1	1	Haemin-degrading	HemS.ChuX	domain
dsrm	PF00035.20	gi|118575513|ref|YP_875256.1|	-	0.074	13.6	0.1	0.11	13.0	0.0	1.3	1	0	0	1	1	1	0	Double-stranded	RNA	binding	motif
DAO	PF01266.19	gi|118575514|ref|YP_875257.1|	-	5.5e-44	150.5	0.7	7.2e-44	150.1	0.5	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Mqo	PF06039.10	gi|118575514|ref|YP_875257.1|	-	8e-11	40.7	0.0	1.5e-05	23.4	0.0	2.3	3	0	0	3	3	3	2	Malate:quinone	oxidoreductase	(Mqo)
Pyr_redox_3	PF13738.1	gi|118575514|ref|YP_875257.1|	-	0.00015	21.8	0.0	0.23	11.4	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|118575514|ref|YP_875257.1|	-	0.0022	17.9	0.1	0.026	14.3	0.0	2.2	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|118575514|ref|YP_875257.1|	-	0.0024	16.8	0.0	0.13	11.2	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_8	PF13450.1	gi|118575514|ref|YP_875257.1|	-	0.0035	17.3	0.0	0.011	15.7	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|118575514|ref|YP_875257.1|	-	0.004	17.5	0.1	2.2	8.7	0.1	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|118575514|ref|YP_875257.1|	-	0.013	14.6	0.1	0.02	14.0	0.0	1.3	1	0	0	1	1	1	0	Thi4	family
NAD_binding_9	PF13454.1	gi|118575514|ref|YP_875257.1|	-	0.078	12.7	0.2	16	5.2	0.0	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Pro_isomerase	PF00160.16	gi|118575516|ref|YP_875259.1|	-	7.6e-07	29.4	0.0	4.5	7.4	0.0	5.4	1	1	4	5	5	5	2	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
DUF3820	PF12843.2	gi|118575516|ref|YP_875259.1|	-	3.7e-06	26.4	0.0	41	3.8	0.0	6.7	8	0	0	8	8	8	0	Protein	of	unknown	function	(DUF3820)
Helicase_C_3	PF13625.1	gi|118575516|ref|YP_875259.1|	-	6.7e-05	22.6	0.9	19	5.0	0.0	4.3	1	1	3	4	4	4	0	Helicase	conserved	C-terminal	domain
Ribonuc_red_2_N	PF08471.5	gi|118575516|ref|YP_875259.1|	-	0.00012	22.0	5.0	27	4.9	0.2	6.6	1	1	4	5	5	5	0	Class	II	vitamin	B12-dependent	ribonucleotide	reductase
PPO1_DWL	PF12142.3	gi|118575516|ref|YP_875259.1|	-	0.0012	18.2	6.3	13	5.3	0.0	6.3	8	0	0	8	8	8	1	Polyphenol	oxidase	middle	domain
Atg8	PF02991.11	gi|118575516|ref|YP_875259.1|	-	0.0025	17.7	0.3	32	4.5	0.0	4.3	5	1	2	7	7	7	0	Autophagy	protein	Atg8	ubiquitin	like
KH_1	PF00013.24	gi|118575516|ref|YP_875259.1|	-	0.0048	16.5	0.4	0.65	9.6	0.1	2.6	2	0	0	2	2	2	1	KH	domain
AGTRAP	PF06396.6	gi|118575516|ref|YP_875259.1|	-	0.018	14.7	1.4	31	4.2	0.0	3.6	2	1	2	4	4	4	0	Angiotensin	II,	type	I	receptor-associated	protein	(AGTRAP)
TraY	PF05509.6	gi|118575516|ref|YP_875259.1|	-	0.026	14.2	0.0	1.1e+02	2.6	0.0	4.1	4	0	0	4	4	4	0	TraY	domain
FlgD_ig	PF13860.1	gi|118575517|ref|YP_875260.1|	-	0.021	14.5	0.1	0.047	13.4	0.0	1.7	1	1	0	1	1	1	0	FlgD	Ig-like	domain
TruB_N	PF01509.13	gi|118575518|ref|YP_875261.1|	-	1.2e-23	83.9	0.4	1.3e-19	70.8	0.3	3.4	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
PUA	PF01472.15	gi|118575518|ref|YP_875261.1|	-	1.6e-16	59.7	0.9	3.7e-16	58.6	0.6	1.6	1	0	0	1	1	1	1	PUA	domain
DKCLD	PF08068.7	gi|118575518|ref|YP_875261.1|	-	4.1e-11	42.6	0.0	9.1e-11	41.5	0.0	1.6	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
AAA_17	PF13207.1	gi|118575519|ref|YP_875262.1|	-	9.6e-11	42.5	0.1	1.3e-10	42.0	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|118575519|ref|YP_875262.1|	-	6.8e-10	39.3	0.0	1.4e-09	38.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|118575519|ref|YP_875262.1|	-	1.5e-07	31.5	0.0	2.2e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	Cytidylate	kinase-like	family
AAA	PF00004.24	gi|118575519|ref|YP_875262.1|	-	9.8e-05	22.5	0.1	0.00023	21.3	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|118575519|ref|YP_875262.1|	-	0.00018	21.5	0.0	0.0003	20.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|118575519|ref|YP_875262.1|	-	0.00033	20.5	0.1	0.0031	17.4	0.1	2.2	1	1	0	1	1	1	1	Shikimate	kinase
ADK	PF00406.17	gi|118575519|ref|YP_875262.1|	-	0.00057	19.7	0.1	0.00095	19.0	0.0	1.3	1	0	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.1	gi|118575519|ref|YP_875262.1|	-	0.00073	19.4	0.0	0.0012	18.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|118575519|ref|YP_875262.1|	-	0.0022	17.2	0.0	0.004	16.3	0.0	1.5	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
AAA_14	PF13173.1	gi|118575519|ref|YP_875262.1|	-	0.0028	17.5	0.0	0.017	14.9	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|118575519|ref|YP_875262.1|	-	0.0033	17.4	0.0	0.0053	16.7	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|118575519|ref|YP_875262.1|	-	0.011	14.7	0.1	0.027	13.5	0.0	1.6	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_19	PF13245.1	gi|118575519|ref|YP_875262.1|	-	0.012	15.3	0.1	0.033	13.9	0.1	1.7	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|118575519|ref|YP_875262.1|	-	0.015	14.7	0.1	0.091	12.1	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|118575519|ref|YP_875262.1|	-	0.017	15.2	0.0	0.035	14.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|118575519|ref|YP_875262.1|	-	0.042	12.9	0.1	4.2	6.4	0.0	2.1	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|118575519|ref|YP_875262.1|	-	0.046	12.8	0.1	0.077	12.0	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
NTPase_1	PF03266.10	gi|118575519|ref|YP_875262.1|	-	0.13	11.9	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	NTPase
Nif11	PF07862.6	gi|118575519|ref|YP_875262.1|	-	0.24	11.3	2.6	27	4.7	0.0	3.3	3	0	0	3	3	3	0	Nitrogen	fixation	protein	of	unknown	function
DUF106	PF01956.11	gi|118575520|ref|YP_875263.1|	-	2.6e-16	59.5	13.3	1.4e-15	57.2	9.2	1.8	1	1	0	1	1	1	1	Integral	membrane	protein	DUF106
60KD_IMP	PF02096.15	gi|118575520|ref|YP_875263.1|	-	0.0047	16.6	2.6	0.0054	16.4	1.8	1.2	1	0	0	1	1	1	1	60Kd	inner	membrane	protein
NUC194	PF08163.7	gi|118575520|ref|YP_875263.1|	-	0.017	14.0	0.5	0.021	13.6	0.3	1.1	1	0	0	1	1	1	0	NUC194	domain
TPT	PF03151.11	gi|118575520|ref|YP_875263.1|	-	0.024	14.2	0.4	0.024	14.2	0.3	1.4	2	0	0	2	2	2	0	Triose-phosphate	Transporter	family
DUF912	PF06024.7	gi|118575520|ref|YP_875263.1|	-	0.05	13.6	0.1	0.084	12.9	0.1	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DUF4199	PF13858.1	gi|118575520|ref|YP_875263.1|	-	0.94	9.3	10.2	0.085	12.7	3.3	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
MHC2-interact	PF09307.5	gi|118575520|ref|YP_875263.1|	-	1.3	8.8	6.4	2.3	8.0	4.5	1.3	1	0	0	1	1	1	0	CLIP,	MHC2	interacting
AAA_18	PF13238.1	gi|118575521|ref|YP_875264.1|	-	6.5e-07	29.7	0.0	8.4e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|118575521|ref|YP_875264.1|	-	0.0037	16.5	0.1	0.005	16.0	0.1	1.4	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
MobB	PF03205.9	gi|118575521|ref|YP_875264.1|	-	0.0046	16.6	0.1	0.0087	15.7	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP_bind_1	PF03029.12	gi|118575521|ref|YP_875264.1|	-	0.026	14.0	0.4	0.067	12.7	0.1	1.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.17	gi|118575521|ref|YP_875264.1|	-	0.026	13.9	0.1	0.052	12.9	0.1	1.6	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|118575521|ref|YP_875264.1|	-	0.028	15.2	0.0	0.043	14.6	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|118575521|ref|YP_875264.1|	-	0.036	13.4	0.0	0.11	11.8	0.0	1.7	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArgK	PF03308.11	gi|118575521|ref|YP_875264.1|	-	0.057	12.1	0.0	0.074	11.8	0.0	1.2	1	0	0	1	1	1	0	ArgK	protein
NTPase_1	PF03266.10	gi|118575521|ref|YP_875264.1|	-	0.059	13.0	0.1	0.1	12.2	0.0	1.5	1	0	0	1	1	1	0	NTPase
SecY	PF00344.15	gi|118575522|ref|YP_875265.1|	-	3.9e-84	282.5	20.7	4.8e-84	282.2	14.3	1.1	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|118575522|ref|YP_875265.1|	-	3.5e-10	39.2	4.4	5.1e-10	38.6	0.3	2.9	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Phage_holin_5	PF06946.6	gi|118575522|ref|YP_875265.1|	-	0.06	13.5	0.4	0.23	11.6	0.0	2.2	2	0	0	2	2	2	0	Phage	holin
Ribosomal_L18e	PF00828.14	gi|118575523|ref|YP_875266.1|	-	2.4e-17	63.5	0.6	3.2e-17	63.0	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|118575524|ref|YP_875267.1|	-	8e-17	60.5	0.2	1.3e-16	59.8	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5	PF00333.15	gi|118575525|ref|YP_875268.1|	-	5.1e-19	67.7	1.0	8.4e-19	67.0	0.7	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.10	gi|118575525|ref|YP_875268.1|	-	6.1e-15	54.2	0.1	1e-14	53.5	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L18p	PF00861.17	gi|118575526|ref|YP_875269.1|	-	1.1e-21	77.2	1.2	1.5e-21	76.8	0.8	1.1	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
OTCace_N	PF02729.16	gi|118575527|ref|YP_875270.1|	-	5.1e-48	162.3	0.0	6.9e-48	161.9	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|118575527|ref|YP_875270.1|	-	6.5e-45	152.8	0.0	1.3e-44	151.8	0.0	1.5	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
SRP54	PF00448.17	gi|118575528|ref|YP_875271.1|	-	2.9e-69	232.4	0.3	4.4e-69	231.8	0.2	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.1	gi|118575528|ref|YP_875271.1|	-	1.8e-06	28.1	0.0	5.4e-06	26.5	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
SRP54_N	PF02881.14	gi|118575528|ref|YP_875271.1|	-	3.2e-06	27.1	1.8	3.9e-06	26.8	0.3	2.0	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
ArgK	PF03308.11	gi|118575528|ref|YP_875271.1|	-	2.2e-05	23.3	0.5	2.2e-05	23.3	0.4	2.1	2	1	0	2	2	2	1	ArgK	protein
AAA_30	PF13604.1	gi|118575528|ref|YP_875271.1|	-	3.1e-05	23.6	0.1	3.1e-05	23.6	0.1	1.9	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|118575528|ref|YP_875271.1|	-	0.00025	20.5	0.3	0.00076	18.9	0.2	1.8	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|118575528|ref|YP_875271.1|	-	0.00031	20.4	0.5	0.01	15.5	0.1	2.5	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TPP_enzyme_M	PF00205.17	gi|118575528|ref|YP_875271.1|	-	0.00042	20.0	0.1	0.028	14.1	0.1	2.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
AAA_19	PF13245.1	gi|118575528|ref|YP_875271.1|	-	0.00093	18.8	0.6	0.0029	17.3	0.3	1.9	1	1	1	2	2	2	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|118575528|ref|YP_875271.1|	-	0.0016	18.4	0.0	0.0041	17.1	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
PIF1	PF05970.9	gi|118575528|ref|YP_875271.1|	-	0.0032	16.4	0.0	0.0048	15.9	0.0	1.2	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_33	PF13671.1	gi|118575528|ref|YP_875271.1|	-	0.0038	17.0	0.0	0.0038	17.0	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
ABC_tran	PF00005.22	gi|118575528|ref|YP_875271.1|	-	0.0059	16.9	0.2	0.036	14.3	0.0	2.1	2	0	0	2	2	2	1	ABC	transporter
CbiA	PF01656.18	gi|118575528|ref|YP_875271.1|	-	0.0076	15.6	0.5	0.0076	15.6	0.4	1.9	2	1	0	2	2	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_23	PF13476.1	gi|118575528|ref|YP_875271.1|	-	0.011	16.1	0.5	1.3	9.3	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|118575528|ref|YP_875271.1|	-	0.016	15.3	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|118575528|ref|YP_875271.1|	-	0.025	14.2	0.8	0.45	10.1	0.1	2.4	1	1	1	2	2	2	0	NTPase
AAA_5	PF07728.9	gi|118575528|ref|YP_875271.1|	-	0.042	13.5	0.0	0.1	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
APS_kinase	PF01583.15	gi|118575528|ref|YP_875271.1|	-	0.044	13.4	0.0	0.089	12.4	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
KTI12	PF08433.5	gi|118575528|ref|YP_875271.1|	-	0.067	12.3	0.0	0.13	11.4	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
PIG-L	PF02585.12	gi|118575528|ref|YP_875271.1|	-	0.071	13.6	1.7	0.93	10.0	0.0	2.5	2	0	0	2	2	2	0	GlcNAc-PI	de-N-acetylase
6PF2K	PF01591.13	gi|118575528|ref|YP_875271.1|	-	0.078	12.0	0.0	0.078	12.0	0.0	1.7	2	0	0	2	2	2	0	6-phosphofructo-2-kinase
Thymidylate_kin	PF02223.12	gi|118575528|ref|YP_875271.1|	-	0.11	11.9	0.0	0.11	11.9	0.0	2.2	2	0	0	2	2	1	0	Thymidylate	kinase
NACHT	PF05729.7	gi|118575528|ref|YP_875271.1|	-	0.14	11.7	0.0	0.27	10.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
RNA_helicase	PF00910.17	gi|118575528|ref|YP_875271.1|	-	0.17	12.0	0.1	2.1	8.5	0.1	2.4	1	1	0	1	1	1	0	RNA	helicase
AAA_17	PF13207.1	gi|118575528|ref|YP_875271.1|	-	0.28	11.9	1.8	1.2	9.9	0.2	2.6	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|118575528|ref|YP_875271.1|	-	0.3	11.0	0.0	0.3	11.0	0.0	2.5	2	1	0	2	2	1	0	AAA	domain
SPOUT_MTase	PF02590.12	gi|118575528|ref|YP_875271.1|	-	1.3	8.7	6.3	1.8	8.2	0.0	2.7	2	1	0	3	3	3	0	Predicted	SPOUT	methyltransferase
Prefoldin	PF02996.12	gi|118575529|ref|YP_875272.1|	-	2.1e-14	53.1	1.4	3.1e-14	52.6	0.9	1.3	1	1	0	1	1	1	1	Prefoldin	subunit
Ribosomal_L5	PF00281.14	gi|118575529|ref|YP_875272.1|	-	0.078	12.7	0.7	1.3	8.9	0.0	2.6	3	0	0	3	3	3	0	Ribosomal	protein	L5
Prefoldin_2	PF01920.15	gi|118575529|ref|YP_875272.1|	-	0.078	12.7	1.3	0.12	12.1	0.1	1.8	2	0	0	2	2	2	0	Prefoldin	subunit
Fer4_14	PF13394.1	gi|118575530|ref|YP_875273.1|	-	0.026	14.5	0.2	33	4.5	0.0	3.0	1	1	2	3	3	3	0	4Fe-4S	single	cluster	domain
DUF1286	PF06939.6	gi|118575532|ref|YP_875275.1|	-	0.14	12.3	1.2	0.36	11.0	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1286)
Sod_Fe_C	PF02777.13	gi|118575533|ref|YP_875276.1|	-	1e-42	144.2	0.2	2.1e-42	143.2	0.1	1.5	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|118575533|ref|YP_875276.1|	-	2e-29	101.6	1.0	3.6e-29	100.8	0.7	1.4	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
PEPCK_ATP	PF01293.15	gi|118575534|ref|YP_875277.1|	-	2.5e-217	722.0	0.0	3e-217	721.7	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
Ribosomal_L32e	PF01655.13	gi|118575535|ref|YP_875278.1|	-	6.2e-36	122.7	0.2	7.3e-36	122.5	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L19e	PF01280.15	gi|118575536|ref|YP_875279.1|	-	3.5e-43	146.9	7.0	3.9e-43	146.7	4.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Fe_hyd_SSU	PF02256.12	gi|118575536|ref|YP_875279.1|	-	0.052	13.5	0.0	0.087	12.8	0.0	1.4	1	0	0	1	1	1	0	Iron	hydrogenase	small	subunit
DNA_binding_1	PF01035.15	gi|118575537|ref|YP_875280.1|	-	8e-29	99.2	0.0	9e-29	99.0	0.0	1.0	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
tRNA_deacylase	PF04414.7	gi|118575538|ref|YP_875281.1|	-	8e-65	217.9	0.0	9.7e-65	217.6	0.0	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
Frag1	PF10277.4	gi|118575539|ref|YP_875282.1|	-	0.027	13.9	0.1	0.029	13.8	0.0	1.0	1	0	0	1	1	1	0	Frag1/DRAM/Sfk1	family
Spt5-NGN	PF03439.8	gi|118575540|ref|YP_875283.1|	-	1.1e-15	57.0	0.0	2.1e-15	56.2	0.0	1.4	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|118575540|ref|YP_875283.1|	-	6.7e-06	25.6	0.0	2.1e-05	24.0	0.0	1.9	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L11_N	PF03946.9	gi|118575541|ref|YP_875284.1|	-	3.1e-23	80.9	0.9	6.9e-23	79.8	0.6	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|118575541|ref|YP_875284.1|	-	5.8e-20	71.2	0.6	9.1e-20	70.5	0.4	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
SBP_bac_5	PF00496.17	gi|118575541|ref|YP_875284.1|	-	0.0097	14.7	0.0	0.011	14.6	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
UPF0444	PF15475.1	gi|118575541|ref|YP_875284.1|	-	0.044	13.8	1.7	0.095	12.7	1.2	1.6	1	0	0	1	1	1	0	Transmembrane	protein	C12orf23,	UPF0444
AsnC_trans_reg	PF01037.16	gi|118575542|ref|YP_875285.1|	-	3.5e-15	55.4	0.0	5.6e-15	54.8	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|118575542|ref|YP_875285.1|	-	2.8e-09	36.1	0.4	5e-09	35.3	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|118575542|ref|YP_875285.1|	-	4.7e-06	26.0	0.0	8.2e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|118575542|ref|YP_875285.1|	-	0.0003	20.5	0.1	0.00043	20.0	0.1	1.3	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
TrmB	PF01978.14	gi|118575542|ref|YP_875285.1|	-	0.00076	19.1	0.2	0.0017	18.0	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|118575542|ref|YP_875285.1|	-	0.0016	18.0	0.2	0.0029	17.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|118575542|ref|YP_875285.1|	-	0.0025	17.4	0.0	0.0043	16.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|118575542|ref|YP_875285.1|	-	0.003	17.1	1.1	0.0075	15.8	0.2	1.9	2	0	0	2	2	2	1	HTH	domain
Rrf2	PF02082.15	gi|118575542|ref|YP_875285.1|	-	0.012	15.6	0.2	0.038	14.1	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
Ribosomal_S25	PF03297.10	gi|118575542|ref|YP_875285.1|	-	0.024	14.6	1.5	0.028	14.4	0.2	1.7	2	1	0	2	2	2	0	S25	ribosomal	protein
Mga	PF05043.8	gi|118575542|ref|YP_875285.1|	-	0.025	14.8	0.3	0.046	13.9	0.2	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_20	PF12840.2	gi|118575542|ref|YP_875285.1|	-	0.042	13.6	0.1	0.13	12.0	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
T4_Gp59_C	PF08994.5	gi|118575542|ref|YP_875285.1|	-	0.063	13.4	0.7	0.096	12.8	0.2	1.6	1	1	1	2	2	2	0	T4	gene	Gp59	loader	of	gp41	DNA	helicase	C-term
HTH_27	PF13463.1	gi|118575542|ref|YP_875285.1|	-	0.082	13.2	0.0	0.19	12.0	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
GCD14	PF08704.5	gi|118575543|ref|YP_875286.1|	-	1.6e-33	116.2	0.1	1.9e-32	112.7	0.0	2.0	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
PCMT	PF01135.14	gi|118575543|ref|YP_875286.1|	-	2.3e-09	37.0	0.1	3.5e-09	36.5	0.1	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|118575543|ref|YP_875286.1|	-	4.4e-09	36.1	0.0	6.7e-09	35.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575543|ref|YP_875286.1|	-	3.2e-07	30.9	0.0	1.1e-06	29.2	0.0	1.7	1	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118575543|ref|YP_875286.1|	-	1.9e-06	27.9	0.0	2.8e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|118575543|ref|YP_875286.1|	-	2.9e-06	26.5	0.0	4e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
RrnaAD	PF00398.15	gi|118575543|ref|YP_875286.1|	-	5.4e-06	25.6	0.0	7.6e-06	25.1	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_24	PF13578.1	gi|118575543|ref|YP_875286.1|	-	1.2e-05	26.0	0.0	2.8e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|118575543|ref|YP_875286.1|	-	4.4e-05	22.6	0.1	6.9e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase
MTS	PF05175.9	gi|118575543|ref|YP_875286.1|	-	8.3e-05	22.0	0.0	0.00014	21.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|118575543|ref|YP_875286.1|	-	0.00024	21.5	0.0	0.0014	19.0	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118575543|ref|YP_875286.1|	-	0.003	17.9	0.0	0.0052	17.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|118575543|ref|YP_875286.1|	-	0.0034	16.5	0.0	0.0044	16.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_12	PF08242.7	gi|118575543|ref|YP_875286.1|	-	0.005	17.2	0.0	0.015	15.7	0.0	1.9	2	1	0	2	2	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|118575543|ref|YP_875286.1|	-	0.016	14.6	0.1	0.037	13.4	0.0	1.6	2	0	0	2	2	2	0	Putative	methyltransferase
GCD14_N	PF14801.1	gi|118575543|ref|YP_875286.1|	-	0.017	14.6	0.0	0.031	13.8	0.0	1.4	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit	N-term
Methyltransf_32	PF13679.1	gi|118575543|ref|YP_875286.1|	-	0.018	14.6	0.0	0.062	12.9	0.0	1.7	1	1	0	2	2	2	0	Methyltransferase	domain
CmcI	PF04989.7	gi|118575543|ref|YP_875286.1|	-	0.043	13.1	0.1	0.067	12.4	0.1	1.3	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
UPF0020	PF01170.13	gi|118575543|ref|YP_875286.1|	-	0.071	12.6	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
tRNA-synt_1d	PF00750.14	gi|118575544|ref|YP_875287.1|	-	2.7e-32	111.9	0.0	8.9e-27	93.8	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|118575544|ref|YP_875287.1|	-	9.8e-25	86.8	0.0	1.5e-24	86.2	0.0	1.3	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|118575544|ref|YP_875287.1|	-	3.6e-13	49.8	0.0	6.6e-13	49.0	0.0	1.5	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1e	PF01406.14	gi|118575544|ref|YP_875287.1|	-	0.0011	18.1	0.1	0.0018	17.4	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1	PF00133.17	gi|118575544|ref|YP_875287.1|	-	0.015	13.3	0.0	0.027	12.4	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|118575544|ref|YP_875287.1|	-	0.026	13.2	0.3	0.056	12.0	0.0	1.6	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|118575544|ref|YP_875287.1|	-	0.06	12.0	0.1	0.13	10.9	0.0	1.5	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
Hydrolase_3	PF08282.7	gi|118575545|ref|YP_875288.1|	-	4.5e-25	88.6	0.0	8.4e-15	55.0	0.0	2.0	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|118575545|ref|YP_875288.1|	-	1.6e-06	28.7	2.1	0.00019	21.9	0.0	2.8	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|118575545|ref|YP_875288.1|	-	6.7e-06	26.4	4.4	0.00014	22.0	0.1	2.7	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.11	gi|118575545|ref|YP_875288.1|	-	0.00023	20.1	0.0	0.0093	14.8	0.0	2.1	2	0	0	2	2	2	1	Trehalose-phosphatase
S6PP	PF05116.8	gi|118575545|ref|YP_875288.1|	-	0.00026	20.3	0.0	0.33	10.2	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase_6	PF13344.1	gi|118575545|ref|YP_875288.1|	-	0.0058	16.4	0.0	0.015	15.1	0.0	1.7	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
LNS2	PF08235.8	gi|118575545|ref|YP_875288.1|	-	0.15	11.6	0.1	0.26	10.8	0.0	1.4	1	0	0	1	1	1	0	LNS2	(Lipin/Ned1/Smp2)
MMR_HSR1	PF01926.18	gi|118575546|ref|YP_875289.1|	-	4.2e-20	71.8	0.0	8.9e-20	70.7	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|118575546|ref|YP_875289.1|	-	4.5e-17	61.6	0.0	7.7e-17	60.8	0.0	1.4	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|118575546|ref|YP_875289.1|	-	2.1e-15	56.3	0.1	5.5e-14	51.7	0.0	2.2	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|118575546|ref|YP_875289.1|	-	1.2e-06	28.4	0.1	0.015	15.1	0.1	2.5	1	1	1	2	2	2	2	Dynamin	family
AIG1	PF04548.11	gi|118575546|ref|YP_875289.1|	-	0.00038	19.6	0.0	0.0038	16.3	0.0	2.1	1	1	1	2	2	2	1	AIG1	family
DUF258	PF03193.11	gi|118575546|ref|YP_875289.1|	-	0.0024	17.0	0.0	0.005	16.0	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Miro	PF08477.8	gi|118575546|ref|YP_875289.1|	-	0.0032	17.9	0.0	0.0066	16.9	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
Arf	PF00025.16	gi|118575546|ref|YP_875289.1|	-	0.0051	16.0	0.1	0.29	10.3	0.0	2.2	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
SRPRB	PF09439.5	gi|118575546|ref|YP_875289.1|	-	0.0069	15.6	2.0	0.021	14.0	0.0	2.3	2	1	1	3	3	3	1	Signal	recognition	particle	receptor	beta	subunit
AAA_28	PF13521.1	gi|118575546|ref|YP_875289.1|	-	0.012	15.6	0.1	0.028	14.3	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|118575546|ref|YP_875289.1|	-	0.016	13.9	0.3	0.064	12.0	0.1	2.1	2	1	0	2	2	2	0	ArgK	protein
AAA_22	PF13401.1	gi|118575546|ref|YP_875289.1|	-	0.023	14.8	0.0	0.22	11.6	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|118575546|ref|YP_875289.1|	-	0.046	13.5	0.1	0.16	11.8	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|118575546|ref|YP_875289.1|	-	0.1	12.0	0.9	11	5.4	0.1	2.4	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
GTP_EFTU	PF00009.22	gi|118575546|ref|YP_875289.1|	-	0.14	11.5	3.1	8.3	5.7	0.0	3.6	3	2	1	4	4	4	0	Elongation	factor	Tu	GTP	binding	domain
HC2	PF07382.6	gi|118575547|ref|YP_875290.1|	-	9.3e-09	35.4	52.0	1.4e-08	34.7	26.9	2.1	1	1	0	1	1	1	1	Histone	H1-like	nucleoprotein	HC2
PEGSRP	PF07623.6	gi|118575547|ref|YP_875290.1|	-	4.4	6.6	45.9	7.9	5.8	4.3	6.2	4	3	0	4	4	4	0	Protein	of	unknown	function	(DUF1584)
Collagen	PF01391.13	gi|118575549|ref|YP_875292.1|	-	1.7e-47	158.8	206.4	1.3e-09	37.4	22.3	6.3	1	1	4	5	5	5	4	Collagen	triple	helix	repeat	(20	copies)
PurS	PF02700.9	gi|118575550|ref|YP_875293.1|	-	4.8e-17	61.6	0.0	5.4e-17	61.5	0.0	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
COX8	PF02285.10	gi|118575552|ref|YP_875295.1|	-	0.13	11.7	0.2	0.3	10.6	0.1	1.5	1	0	0	1	1	1	0	Cytochrome	oxidase	c	subunit	VIII
DDE_Tnp_IS66	PF03050.9	gi|118575553|ref|YP_875296.1|	-	1.1e-41	142.8	0.0	1.1e-41	142.8	0.0	2.4	3	0	0	3	3	3	1	Transposase	IS66	family
Transposase_mut	PF00872.13	gi|118575553|ref|YP_875296.1|	-	0.00051	18.7	1.3	0.00051	18.7	0.9	2.5	3	1	0	3	3	3	1	Transposase,	Mutator	family
DivIC	PF04977.10	gi|118575553|ref|YP_875296.1|	-	0.0034	16.8	6.1	0.2	11.1	2.5	3.2	2	1	1	3	3	3	1	Septum	formation	initiator
Tropomyosin	PF00261.15	gi|118575553|ref|YP_875296.1|	-	0.0056	15.8	7.1	0.0056	15.8	4.9	2.0	2	0	0	2	2	2	1	Tropomyosin
Thioredoxin_3	PF13192.1	gi|118575553|ref|YP_875296.1|	-	0.054	13.3	1.4	0.15	11.9	0.4	2.1	2	0	0	2	2	2	0	Thioredoxin	domain
DMPK_coil	PF08826.5	gi|118575553|ref|YP_875296.1|	-	0.088	12.7	11.7	0.066	13.1	2.7	3.6	2	1	1	3	3	3	0	DMPK	coiled	coil	domain	like
DUF724	PF05266.9	gi|118575553|ref|YP_875296.1|	-	0.099	12.2	4.4	0.043	13.4	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
Tropomyosin_1	PF12718.2	gi|118575553|ref|YP_875296.1|	-	0.34	10.7	9.0	0.085	12.7	3.4	2.0	2	0	0	2	2	2	0	Tropomyosin	like
DUF4200	PF13863.1	gi|118575553|ref|YP_875296.1|	-	0.68	9.8	11.0	0.18	11.7	4.9	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
CENP-F_leu_zip	PF10473.4	gi|118575553|ref|YP_875296.1|	-	1.2	9.0	8.6	0.9	9.4	3.6	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
M	PF02370.11	gi|118575553|ref|YP_875296.1|	-	4.9	7.8	13.5	13	6.5	0.9	4.5	4	0	0	4	4	4	0	M	protein	repeat
IncA	PF04156.9	gi|118575553|ref|YP_875296.1|	-	5.3	6.5	11.9	0.087	12.4	2.5	2.2	3	0	0	3	3	3	0	IncA	protein
TPR_11	PF13414.1	gi|118575554|ref|YP_875297.1|	-	2.8e-23	81.3	1.7	6.1e-11	41.8	0.0	2.5	2	0	0	2	2	2	2	TPR	repeat
TPR_2	PF07719.12	gi|118575554|ref|YP_875297.1|	-	1e-22	78.1	0.9	1.8e-06	27.3	0.0	4.4	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118575554|ref|YP_875297.1|	-	4.8e-21	73.4	4.0	0.00013	21.4	0.1	4.4	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118575554|ref|YP_875297.1|	-	1.7e-16	60.4	0.0	2.5e-10	40.7	0.1	2.9	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118575554|ref|YP_875297.1|	-	8.8e-15	54.7	1.2	1.8e-08	34.5	0.5	2.5	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118575554|ref|YP_875297.1|	-	6.1e-14	50.9	1.1	0.0018	18.2	0.0	3.8	3	0	0	3	3	3	3	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118575554|ref|YP_875297.1|	-	2e-13	49.0	7.8	0.00029	20.3	0.1	4.4	3	1	1	4	4	4	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118575554|ref|YP_875297.1|	-	7e-13	48.3	1.0	3.5e-05	23.6	0.0	2.7	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118575554|ref|YP_875297.1|	-	1.4e-09	37.7	0.4	0.1	13.3	0.2	4.4	2	1	2	4	4	4	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118575554|ref|YP_875297.1|	-	3.6e-07	29.4	2.4	0.4	10.6	0.1	4.5	4	0	0	4	4	4	3	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|118575554|ref|YP_875297.1|	-	1.4e-06	28.2	7.9	0.00036	20.5	1.1	2.0	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
Fis1_TPR_C	PF14853.1	gi|118575554|ref|YP_875297.1|	-	8.7e-06	25.5	0.1	0.0079	16.0	0.0	3.3	1	1	2	3	3	3	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118575554|ref|YP_875297.1|	-	1.5e-05	24.7	0.2	0.00023	20.9	0.0	2.6	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118575554|ref|YP_875297.1|	-	3e-05	24.1	0.8	5.2	7.7	0.0	4.3	4	0	0	4	4	4	1	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|118575554|ref|YP_875297.1|	-	0.0081	15.3	0.9	1.4	8.0	0.1	2.3	1	1	1	2	2	2	2	Coatomer	epsilon	subunit
TPR_10	PF13374.1	gi|118575554|ref|YP_875297.1|	-	0.015	15.2	0.1	9.7	6.2	0.0	3.4	3	0	0	3	3	3	0	Tetratricopeptide	repeat
YfiO	PF13525.1	gi|118575554|ref|YP_875297.1|	-	0.015	14.7	0.5	0.14	11.5	0.1	2.1	2	0	0	2	2	2	0	Outer	membrane	lipoprotein
TPR_20	PF14561.1	gi|118575554|ref|YP_875297.1|	-	0.048	13.7	0.5	1.5	9.0	0.1	3.1	2	1	0	3	3	2	0	Tetratricopeptide	repeat
TrmB	PF01978.14	gi|118575554|ref|YP_875297.1|	-	0.11	12.2	0.0	15	5.3	0.0	2.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
RuvA_C	PF07499.8	gi|118575554|ref|YP_875297.1|	-	0.15	12.2	1.5	12	6.2	0.2	3.2	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
TPR_3	PF07720.7	gi|118575554|ref|YP_875297.1|	-	0.31	10.9	10.8	2.5	8.0	0.2	3.7	4	0	0	4	4	4	0	Tetratricopeptide	repeat
NIR_SIR	PF01077.17	gi|118575555|ref|YP_875298.1|	-	4.6e-40	136.5	0.0	8e-29	100.0	0.0	2.4	2	0	0	2	2	2	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|118575555|ref|YP_875298.1|	-	2.4e-38	129.5	0.0	6.1e-18	64.2	0.0	2.6	2	0	0	2	2	2	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Rhodanese	PF00581.15	gi|118575556|ref|YP_875299.1|	-	5.2e-34	116.9	0.0	3.6e-16	59.5	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
NIR_SIR	PF01077.17	gi|118575557|ref|YP_875300.1|	-	1.1e-40	138.6	0.0	3e-30	104.6	0.0	2.3	2	0	0	2	2	2	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|118575557|ref|YP_875300.1|	-	6.1e-35	118.6	0.0	2.9e-16	58.8	0.0	2.4	2	0	0	2	2	2	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Thi4	PF01946.12	gi|118575558|ref|YP_875301.1|	-	4.3e-64	215.7	0.2	5.1e-64	215.5	0.2	1.1	1	0	0	1	1	1	1	Thi4	family
FAD_binding_2	PF00890.19	gi|118575558|ref|YP_875301.1|	-	2.8e-13	49.4	1.0	1.3e-06	27.5	0.1	2.9	1	1	2	3	3	3	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|118575558|ref|YP_875301.1|	-	1.1e-08	34.6	0.0	1.7e-08	33.9	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|118575558|ref|YP_875301.1|	-	3e-08	32.9	0.4	7e-05	21.8	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|118575558|ref|YP_875301.1|	-	5.2e-08	32.8	0.0	1.1e-07	31.8	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|118575558|ref|YP_875301.1|	-	4e-07	29.4	0.1	6e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|118575558|ref|YP_875301.1|	-	9.3e-07	28.9	0.1	1.3e-06	28.4	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|118575558|ref|YP_875301.1|	-	1.5e-06	26.9	0.1	2.3e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	HI0933-like	protein
Lycopene_cycl	PF05834.7	gi|118575558|ref|YP_875301.1|	-	7.6e-06	25.0	0.1	0.00038	19.4	0.0	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.1	gi|118575558|ref|YP_875301.1|	-	0.00076	19.5	0.2	0.0014	18.7	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|118575558|ref|YP_875301.1|	-	0.0008	18.3	0.1	0.0012	17.7	0.1	1.2	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|118575558|ref|YP_875301.1|	-	0.013	15.2	0.2	0.03	14.1	0.1	1.6	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|118575558|ref|YP_875301.1|	-	0.021	13.4	0.1	1.7	7.2	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Amino_oxidase	PF01593.19	gi|118575558|ref|YP_875301.1|	-	0.023	13.8	0.0	0.034	13.2	0.0	1.2	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
Pyr_redox	PF00070.22	gi|118575558|ref|YP_875301.1|	-	0.059	13.7	0.1	0.16	12.3	0.0	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|118575558|ref|YP_875301.1|	-	0.071	11.4	0.0	0.11	10.7	0.0	1.2	1	0	0	1	1	1	0	GDP	dissociation	inhibitor
AlaDh_PNT_C	PF01262.16	gi|118575558|ref|YP_875301.1|	-	0.078	12.5	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.13	gi|118575558|ref|YP_875301.1|	-	0.1	12.6	0.1	0.2	11.6	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|118575558|ref|YP_875301.1|	-	0.13	11.3	0.0	0.24	10.5	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|118575560|ref|YP_875303.1|	-	1.2e-32	113.4	0.6	1.4e-32	113.1	0.4	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|118575560|ref|YP_875303.1|	-	1.7e-17	63.6	0.3	1.7e-17	63.6	0.2	2.7	3	1	1	4	4	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|118575560|ref|YP_875303.1|	-	6.1e-16	59.0	0.3	1.7e-10	41.3	0.0	3.1	1	1	2	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|118575560|ref|YP_875303.1|	-	2.3e-06	26.7	6.7	0.00036	19.5	0.1	3.8	2	1	3	5	5	5	1	FAD	binding	domain
DAO	PF01266.19	gi|118575560|ref|YP_875303.1|	-	6.7e-06	25.2	6.4	0.00022	20.2	0.0	2.8	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.1	gi|118575560|ref|YP_875303.1|	-	4.5e-05	22.5	0.2	0.0021	17.0	0.0	2.8	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Thi4	PF01946.12	gi|118575560|ref|YP_875303.1|	-	7.2e-05	21.9	0.0	0.011	14.8	0.0	2.5	2	0	0	2	2	2	1	Thi4	family
GIDA	PF01134.17	gi|118575560|ref|YP_875303.1|	-	0.00012	21.1	0.8	0.035	12.9	0.0	3.6	4	0	0	4	4	4	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|118575560|ref|YP_875303.1|	-	0.00032	19.2	1.3	0.015	13.8	0.0	3.3	4	1	1	5	5	5	1	HI0933-like	protein
NAD_binding_7	PF13241.1	gi|118575560|ref|YP_875303.1|	-	0.00089	19.4	0.2	0.0077	16.4	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|118575560|ref|YP_875303.1|	-	0.0012	18.6	3.9	1.4	8.7	0.0	3.3	3	0	0	3	3	3	2	FAD-NAD(P)-binding
FAD_oxidored	PF12831.2	gi|118575560|ref|YP_875303.1|	-	0.0052	15.9	0.1	0.06	12.4	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|118575560|ref|YP_875303.1|	-	0.0081	16.1	0.1	0.21	11.6	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|118575560|ref|YP_875303.1|	-	0.0093	15.0	0.0	0.17	10.9	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|118575560|ref|YP_875303.1|	-	0.024	13.5	1.5	3.9	6.2	0.1	3.1	3	1	1	4	4	4	0	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|118575560|ref|YP_875303.1|	-	0.043	12.4	0.8	0.71	8.4	0.1	2.7	3	0	0	3	3	3	0	Tryptophan	halogenase
Shikimate_DH	PF01488.15	gi|118575560|ref|YP_875303.1|	-	0.12	12.4	0.1	4.1	7.5	0.0	2.7	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
TusA	PF01206.12	gi|118575561|ref|YP_875304.1|	-	3.7e-24	84.1	0.0	4.1e-24	83.9	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
PHP_C	PF13263.1	gi|118575562|ref|YP_875305.1|	-	5.4e-15	54.6	0.4	1.6e-14	53.1	0.2	1.9	2	0	0	2	2	2	1	PHP-associated
PHP	PF02811.14	gi|118575562|ref|YP_875305.1|	-	0.0021	17.8	0.3	0.0054	16.5	0.2	1.6	1	1	0	1	1	1	1	PHP	domain
F420_ligase	PF01996.11	gi|118575563|ref|YP_875306.1|	-	3.8e-49	166.8	0.1	4.5e-49	166.5	0.1	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Hydrolase	PF00702.21	gi|118575564|ref|YP_875307.1|	-	2.8e-08	34.4	0.3	1.2e-07	32.3	0.2	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|118575564|ref|YP_875307.1|	-	1.1e-07	32.1	0.2	1.5e-07	31.7	0.1	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|118575564|ref|YP_875307.1|	-	1.6e-06	28.4	0.0	2.9e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|118575564|ref|YP_875307.1|	-	0.00015	21.4	0.1	0.0019	17.8	0.0	2.1	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
GATase_3	PF07685.9	gi|118575564|ref|YP_875307.1|	-	0.14	11.7	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
ProRS-C_1	PF09180.6	gi|118575566|ref|YP_875309.1|	-	1.1e-16	60.5	0.1	2.9e-16	59.1	0.1	1.8	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
HGTP_anticodon	PF03129.15	gi|118575566|ref|YP_875309.1|	-	4.8e-16	58.4	0.0	7.9e-16	57.7	0.0	1.4	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|118575566|ref|YP_875309.1|	-	1e-14	54.5	0.0	1.5e-14	53.9	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
FGE-sulfatase	PF03781.11	gi|118575568|ref|YP_875311.1|	-	1.4e-44	152.3	6.8	2.2e-44	151.7	4.7	1.3	1	0	0	1	1	1	1	Sulfatase-modifying	factor	enzyme	1
DinB_2	PF12867.2	gi|118575568|ref|YP_875311.1|	-	2.7e-15	56.8	0.0	2.3e-14	53.8	0.0	2.3	2	1	0	2	2	2	1	DinB	superfamily
Methyltransf_33	PF10017.4	gi|118575569|ref|YP_875312.1|	-	2.3e-43	147.1	0.0	3.1e-43	146.7	0.0	1.2	1	0	0	1	1	1	1	Histidine-specific	methyltransferase,	SAM-dependent
DUF3847	PF12958.2	gi|118575571|ref|YP_875314.1|	-	0.52	10.1	3.6	2.1	8.1	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3847)
SDH_sah	PF01972.11	gi|118575572|ref|YP_875315.1|	-	4.4e-17	61.7	0.0	7.3e-17	61.0	0.0	1.4	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.18	gi|118575572|ref|YP_875315.1|	-	0.00017	21.3	0.6	0.00029	20.5	0.0	1.7	2	0	0	2	2	2	1	Clp	protease
zf-ribbon_3	PF13248.1	gi|118575573|ref|YP_875316.1|	-	5.7e-05	22.1	1.5	0.00045	19.3	0.2	2.5	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118575573|ref|YP_875316.1|	-	8.6e-05	21.8	1.2	8.6e-05	21.8	0.8	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|118575573|ref|YP_875316.1|	-	0.00031	20.4	0.2	0.00095	18.9	0.0	1.9	2	0	0	2	2	2	1	Double	zinc	ribbon
RskA	PF10099.4	gi|118575573|ref|YP_875316.1|	-	0.019	14.7	0.1	0.04	13.6	0.1	1.4	1	0	0	1	1	1	0	Anti-sigma-K	factor	rskA
ABC_tran	PF00005.22	gi|118575574|ref|YP_875317.1|	-	6.1e-30	104.3	0.0	8.2e-30	103.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|118575574|ref|YP_875317.1|	-	4.5e-16	58.9	0.1	7.8e-16	58.1	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|118575574|ref|YP_875317.1|	-	1.2e-06	28.6	0.2	0.00061	19.8	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|118575574|ref|YP_875317.1|	-	3.3e-05	23.9	0.1	6.1e-05	23.0	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|118575574|ref|YP_875317.1|	-	0.00017	20.8	0.0	0.00029	20.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|118575574|ref|YP_875317.1|	-	0.00018	21.6	0.0	0.002	18.2	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|118575574|ref|YP_875317.1|	-	0.00031	20.1	0.0	0.00067	19.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|118575574|ref|YP_875317.1|	-	0.00074	18.9	0.2	0.0031	16.9	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|118575574|ref|YP_875317.1|	-	0.0041	16.5	0.2	0.025	14.0	0.0	2.0	1	1	0	2	2	2	1	AAA-like	domain
SMC_N	PF02463.14	gi|118575574|ref|YP_875317.1|	-	0.0064	15.7	0.0	0.34	10.1	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Zeta_toxin	PF06414.7	gi|118575574|ref|YP_875317.1|	-	0.0076	15.3	0.0	0.013	14.6	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
T2SE	PF00437.15	gi|118575574|ref|YP_875317.1|	-	0.02	13.8	0.0	0.051	12.4	0.0	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|118575574|ref|YP_875317.1|	-	0.022	14.9	0.1	0.28	11.4	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|118575574|ref|YP_875317.1|	-	0.039	13.6	0.0	0.1	12.3	0.0	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|118575574|ref|YP_875317.1|	-	0.044	14.6	0.0	0.079	13.7	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|118575574|ref|YP_875317.1|	-	0.046	14.0	0.0	0.07	13.4	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|118575574|ref|YP_875317.1|	-	0.063	13.1	0.0	0.36	10.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|118575574|ref|YP_875317.1|	-	0.064	13.2	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|118575574|ref|YP_875317.1|	-	0.1	12.8	0.0	0.17	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|118575574|ref|YP_875317.1|	-	0.12	11.9	0.0	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
Sigma54_activat	PF00158.21	gi|118575574|ref|YP_875317.1|	-	0.15	11.4	0.0	0.26	10.7	0.0	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
UPF0079	PF02367.12	gi|118575574|ref|YP_875317.1|	-	0.17	11.5	0.0	0.3	10.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|118575575|ref|YP_875318.1|	-	5.2e-60	202.4	0.1	6.8e-60	202.0	0.1	1.1	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SMC_hinge	PF06470.8	gi|118575575|ref|YP_875318.1|	-	1.2e-18	67.2	0.1	1.3e-17	63.8	0.0	2.7	3	0	0	3	3	3	1	SMC	proteins	Flexible	Hinge	Domain
AAA_23	PF13476.1	gi|118575575|ref|YP_875318.1|	-	1.3e-18	68.1	0.5	1.3e-18	68.1	0.3	3.8	3	2	1	4	4	4	1	AAA	domain
AAA_21	PF13304.1	gi|118575575|ref|YP_875318.1|	-	1.1e-13	51.7	0.1	1e-06	28.9	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|118575575|ref|YP_875318.1|	-	2.2e-09	36.9	0.0	1.4e-05	24.3	0.0	2.5	2	2	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|118575575|ref|YP_875318.1|	-	7.6e-06	25.3	0.0	1.9e-05	24.0	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|118575575|ref|YP_875318.1|	-	6.5e-05	23.2	1.2	0.0043	17.3	0.0	3.6	3	1	0	3	3	3	1	ABC	transporter
NAD_binding_5	PF07994.7	gi|118575576|ref|YP_875319.1|	-	1.5e-38	132.9	0.0	8.1e-38	130.5	0.0	1.8	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|118575576|ref|YP_875319.1|	-	2.8e-29	101.2	0.0	5.7e-29	100.2	0.0	1.5	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
DS	PF01916.12	gi|118575577|ref|YP_875320.1|	-	7.6e-65	218.9	0.0	8.9e-65	218.7	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Big_5	PF13205.1	gi|118575578|ref|YP_875321.1|	-	0.013	16.0	10.0	0.27	11.8	1.0	3.5	3	0	0	3	3	3	0	Bacterial	Ig-like	domain
NHL	PF01436.16	gi|118575578|ref|YP_875321.1|	-	0.014	15.3	0.0	0.014	15.3	0.0	3.5	4	0	0	4	4	4	0	NHL	repeat
Peptidase_S8	PF00082.17	gi|118575579|ref|YP_875322.1|	-	9.2e-23	80.7	6.2	1.5e-22	80.0	4.3	1.3	1	0	0	1	1	1	1	Subtilase	family
PAC2	PF09754.4	gi|118575580|ref|YP_875323.1|	-	6.1e-24	85.0	0.0	7.4e-24	84.8	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Alba	PF01918.16	gi|118575581|ref|YP_875324.1|	-	1.4e-10	40.5	0.8	2.1e-10	40.0	0.5	1.2	1	0	0	1	1	1	1	Alba
Waikav_capsid_1	PF12264.3	gi|118575581|ref|YP_875324.1|	-	0.046	12.9	0.2	0.058	12.6	0.1	1.1	1	0	0	1	1	1	0	Waikavirus	capsid	protein	1
CBFNT	PF08143.6	gi|118575581|ref|YP_875324.1|	-	1.5	9.9	6.8	2.2	9.4	4.7	1.2	1	0	0	1	1	1	0	CBFNT	(NUC161)	domain
DPCD	PF14913.1	gi|118575582|ref|YP_875325.1|	-	0.088	11.9	0.1	0.096	11.7	0.0	1.1	1	0	0	1	1	1	0	DPCD	protein	family
IMS	PF00817.15	gi|118575583|ref|YP_875326.1|	-	4.9e-38	130.2	0.0	8.7e-38	129.4	0.0	1.4	1	0	0	1	1	1	1	impB/mucB/samB	family
IMS_C	PF11799.3	gi|118575583|ref|YP_875326.1|	-	3.3e-17	62.6	0.9	5.3e-17	61.9	0.6	1.3	1	0	0	1	1	1	1	impB/mucB/samB	family	C-terminal	domain
IMS_HHH	PF11798.3	gi|118575583|ref|YP_875326.1|	-	9.8e-11	41.0	0.1	2.1e-10	40.0	0.1	1.6	1	0	0	1	1	1	1	IMS	family	HHH	motif
HHH_5	PF14520.1	gi|118575583|ref|YP_875326.1|	-	9.2e-05	22.5	0.0	0.0002	21.4	0.0	1.8	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
Cdd1	PF11731.3	gi|118575583|ref|YP_875326.1|	-	0.00059	19.7	0.0	0.0013	18.6	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
TfoX_C	PF04994.8	gi|118575583|ref|YP_875326.1|	-	0.00064	19.5	0.0	0.0062	16.4	0.0	2.6	3	0	0	3	3	3	1	TfoX	C-terminal	domain
Exosortase_EpsH	PF09721.5	gi|118575584|ref|YP_875327.1|	-	2.4e-06	26.9	21.7	3.8e-06	26.3	15.0	1.3	1	0	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
Lig_chan	PF00060.21	gi|118575584|ref|YP_875327.1|	-	6	6.5	7.4	14	5.3	5.1	1.8	1	1	0	1	1	1	0	Ligand-gated	ion	channel
DM13	PF10517.4	gi|118575585|ref|YP_875328.1|	-	2.2e-21	76.2	0.0	4.5e-21	75.2	0.0	1.5	1	0	0	1	1	1	1	Electron	transfer	DM13
FixQ	PF05545.6	gi|118575588|ref|YP_875331.1|	-	0.12	12.0	2.9	0.25	11.0	2.0	1.5	1	0	0	1	1	1	0	Cbb3-type	cytochrome	oxidase	component	FixQ
ABC2_membrane_4	PF12730.2	gi|118575588|ref|YP_875331.1|	-	0.21	10.7	5.8	0.25	10.4	4.0	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3671	PF12420.3	gi|118575588|ref|YP_875331.1|	-	0.56	10.2	2.6	0.71	9.8	1.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function
Monooxygenase_B	PF04744.7	gi|118575591|ref|YP_875334.1|	-	5e-06	25.4	0.0	9.3e-06	24.5	0.0	1.4	1	0	0	1	1	1	1	Monooxygenase	subunit	B	protein
Baculo_LEF5_C	PF11792.3	gi|118575592|ref|YP_875335.1|	-	0.15	11.4	1.1	0.58	9.5	0.0	2.1	2	0	0	2	2	2	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
AmoC	PF04896.7	gi|118575596|ref|YP_875339.1|	-	8.9e-16	57.6	5.6	1.1e-15	57.3	3.9	1.1	1	0	0	1	1	1	1	Ammonia	monooxygenase/methane	monooxygenase,	subunit	C
EGF_3	PF12947.2	gi|118575597|ref|YP_875340.1|	-	3.6	7.6	6.2	20	5.2	0.1	2.9	4	0	0	4	4	4	0	EGF	domain
Archaeal_AmoA	PF12942.2	gi|118575599|ref|YP_875342.1|	-	5.9e-105	348.8	10.0	7e-105	348.6	6.9	1.1	1	0	0	1	1	1	1	Archaeal	ammonia	monooxygenase	subunit	A	(AmoA)
MethyltransfD12	PF02086.10	gi|118575600|ref|YP_875343.1|	-	7.1e-53	179.7	0.0	7.9e-53	179.5	0.0	1.0	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_26	PF13659.1	gi|118575600|ref|YP_875343.1|	-	2.7e-05	24.1	0.9	4.8e-05	23.3	0.6	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
DUF576	PF04507.7	gi|118575601|ref|YP_875344.1|	-	0.031	13.1	0.1	0.038	12.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF576
DUF4500	PF14937.1	gi|118575601|ref|YP_875344.1|	-	0.038	13.8	0.1	0.05	13.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4500)
DUF2199	PF09965.4	gi|118575601|ref|YP_875344.1|	-	0.075	12.8	1.3	3.9	7.3	0.1	2.3	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2199)
GTP_EFTU	PF00009.22	gi|118575602|ref|YP_875345.1|	-	2.5e-48	164.0	0.0	3.4e-48	163.5	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|118575602|ref|YP_875345.1|	-	1.2e-28	99.1	0.3	4.8e-28	97.2	0.1	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|118575602|ref|YP_875345.1|	-	2.9e-19	68.9	1.0	8.9e-19	67.3	0.5	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|118575602|ref|YP_875345.1|	-	4.9e-08	32.5	0.5	1.3e-07	31.1	0.3	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|118575602|ref|YP_875345.1|	-	0.0025	17.7	0.0	0.0061	16.5	0.0	1.6	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Ribosomal_S10	PF00338.17	gi|118575603|ref|YP_875346.1|	-	2.3e-23	81.8	0.0	2.5e-23	81.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
DNA_RNApol_7kD	PF03604.8	gi|118575604|ref|YP_875347.1|	-	8e-05	22.0	1.6	0.00016	21.0	1.1	1.5	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2_4	PF13894.1	gi|118575605|ref|YP_875348.1|	-	4.3e-09	36.0	5.5	0.0002	21.4	0.5	2.2	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|118575605|ref|YP_875348.1|	-	1.1e-06	28.6	9.0	0.0042	17.3	1.2	2.2	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_6	PF13912.1	gi|118575605|ref|YP_875348.1|	-	1.1e-06	28.3	3.7	0.00054	19.7	0.2	2.1	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zinc_ribbon_5	PF13719.1	gi|118575605|ref|YP_875348.1|	-	0.00014	21.3	1.3	0.13	11.8	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|118575605|ref|YP_875348.1|	-	0.0002	21.0	0.9	0.16	11.6	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|118575605|ref|YP_875348.1|	-	0.00061	19.6	3.1	0.11	12.4	0.3	2.2	2	0	0	2	2	2	1	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|118575605|ref|YP_875348.1|	-	0.00062	20.0	0.4	0.00085	19.5	0.3	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-HIT	PF04438.11	gi|118575605|ref|YP_875348.1|	-	0.0012	18.4	1.1	0.42	10.3	0.1	2.1	2	0	0	2	2	2	1	HIT	zinc	finger
Prok-RING_1	PF14446.1	gi|118575605|ref|YP_875348.1|	-	0.0032	17.1	0.4	2.1	8.1	0.0	2.2	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
zinc_ribbon_2	PF13240.1	gi|118575605|ref|YP_875348.1|	-	0.0032	16.9	1.3	0.011	15.2	0.9	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
CpXC	PF14353.1	gi|118575605|ref|YP_875348.1|	-	0.0033	17.3	1.4	0.21	11.5	0.0	2.1	1	1	1	2	2	2	1	CpXC	protein
zf-Mss51	PF13824.1	gi|118575605|ref|YP_875348.1|	-	0.004	16.9	4.6	0.067	13.0	3.3	2.0	1	1	0	1	1	1	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Rubredoxin	PF00301.15	gi|118575605|ref|YP_875348.1|	-	0.0053	16.5	0.7	2.3	8.1	0.0	2.1	2	0	0	2	2	2	1	Rubredoxin
zf-C2H2_2	PF12756.2	gi|118575605|ref|YP_875348.1|	-	0.0066	16.5	5.3	0.28	11.3	1.2	2.0	1	1	1	2	2	2	2	C2H2	type	zinc-finger	(2	copies)
Ogr_Delta	PF04606.7	gi|118575605|ref|YP_875348.1|	-	0.0067	16.0	1.1	0.01	15.4	0.8	1.3	1	1	0	1	1	1	1	Ogr/Delta-like	zinc	finger
zf-ISL3	PF14690.1	gi|118575605|ref|YP_875348.1|	-	0.0067	16.4	2.3	0.46	10.5	0.2	2.3	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_ribbon_recom	PF13408.1	gi|118575605|ref|YP_875348.1|	-	0.01	16.1	4.5	0.026	14.7	3.1	1.7	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-Di19	PF05605.7	gi|118575605|ref|YP_875348.1|	-	0.01	15.9	3.4	0.11	12.6	2.4	1.9	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-CSL	PF05207.8	gi|118575605|ref|YP_875348.1|	-	0.014	14.8	2.1	0.63	9.5	1.9	2.0	1	1	1	2	2	2	0	CSL	zinc	finger
DZR	PF12773.2	gi|118575605|ref|YP_875348.1|	-	0.014	15.1	0.9	0.029	14.2	0.6	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
IBR	PF01485.16	gi|118575605|ref|YP_875348.1|	-	0.02	14.7	0.4	0.031	14.1	0.3	1.2	1	0	0	1	1	1	0	IBR	domain
zf-IS66	PF13005.2	gi|118575605|ref|YP_875348.1|	-	0.022	14.7	1.6	4.8	7.2	0.1	2.2	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DUF35_N	PF12172.3	gi|118575605|ref|YP_875348.1|	-	0.025	14.4	3.2	0.72	9.8	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ribbon_3	PF13248.1	gi|118575605|ref|YP_875348.1|	-	0.025	13.7	2.1	0.42	9.8	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_jaz	PF12171.3	gi|118575605|ref|YP_875348.1|	-	0.027	14.6	1.7	0.87	9.8	0.2	2.2	2	0	0	2	2	2	0	Zinc-finger	double-stranded	RNA-binding
DUF1610	PF07754.6	gi|118575605|ref|YP_875348.1|	-	0.043	13.9	3.4	1.1	9.4	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-C2H2_3	PF13878.1	gi|118575605|ref|YP_875348.1|	-	0.046	13.2	3.2	0.68	9.5	0.2	2.4	2	1	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-met	PF12874.2	gi|118575605|ref|YP_875348.1|	-	0.048	13.8	1.8	4.5	7.6	0.0	2.2	2	0	0	2	2	2	0	Zinc-finger	of	C2H2	type
HNH	PF01844.18	gi|118575605|ref|YP_875348.1|	-	0.061	13.1	3.7	0.87	9.5	0.2	2.2	2	0	0	2	2	2	0	HNH	endonuclease
Ribosomal_L34e	PF01199.13	gi|118575605|ref|YP_875348.1|	-	0.065	13.4	0.8	0.44	10.8	0.1	1.9	1	1	1	2	2	2	0	Ribosomal	protein	L34e
C1_1	PF00130.17	gi|118575605|ref|YP_875348.1|	-	0.067	12.9	1.9	0.22	11.2	1.3	1.8	1	1	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Terminase_GpA	PF05876.7	gi|118575605|ref|YP_875348.1|	-	0.086	11.1	2.2	0.09	11.1	1.5	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
zf-FPG_IleRS	PF06827.9	gi|118575605|ref|YP_875348.1|	-	0.099	12.3	1.3	1.8	8.2	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-AN1	PF01428.11	gi|118575605|ref|YP_875348.1|	-	0.11	12.3	1.5	3.1	7.7	0.1	2.2	2	0	0	2	2	2	0	AN1-like	Zinc	finger
zf-DNA_Pol	PF08996.5	gi|118575605|ref|YP_875348.1|	-	0.14	11.5	0.2	0.16	11.2	0.2	1.1	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
A2L_zn_ribbon	PF08792.5	gi|118575605|ref|YP_875348.1|	-	0.17	11.4	0.5	15	5.2	0.0	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
LIM	PF00412.17	gi|118575605|ref|YP_875348.1|	-	0.21	11.6	1.6	0.25	11.4	1.1	1.2	1	0	0	1	1	1	0	LIM	domain
zf-NADH-PPase	PF09297.6	gi|118575605|ref|YP_875348.1|	-	0.21	11.1	5.1	5.5	6.5	0.9	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
C1_4	PF07975.7	gi|118575605|ref|YP_875348.1|	-	0.23	11.5	1.8	1.9	8.5	1.3	2.0	1	1	1	2	2	2	0	TFIIH	C1-like	domain
GFA	PF04828.9	gi|118575605|ref|YP_875348.1|	-	0.23	11.3	3.1	3.3	7.7	0.1	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
TF_Zn_Ribbon	PF08271.7	gi|118575605|ref|YP_875348.1|	-	0.24	10.7	2.9	1.3	8.3	2.0	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
HypA	PF01155.14	gi|118575605|ref|YP_875348.1|	-	0.31	10.7	1.7	0.42	10.3	1.1	1.3	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF1644	PF07800.7	gi|118575605|ref|YP_875348.1|	-	0.34	10.7	2.5	0.41	10.5	1.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1644)
Tnp_zf-ribbon_2	PF13842.1	gi|118575605|ref|YP_875348.1|	-	0.38	11.2	3.9	3	8.3	0.2	2.1	1	1	1	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
TFIIS_C	PF01096.13	gi|118575605|ref|YP_875348.1|	-	0.39	10.3	2.6	9.7	5.9	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Ribosomal_L44	PF00935.14	gi|118575605|ref|YP_875348.1|	-	0.46	10.5	3.3	1.8	8.6	2.3	2.0	1	1	0	1	1	1	0	Ribosomal	protein	L44
zf-TFIIB	PF13453.1	gi|118575605|ref|YP_875348.1|	-	0.58	9.3	3.5	1.3	8.2	2.4	1.6	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-BED	PF02892.10	gi|118575605|ref|YP_875348.1|	-	0.67	9.7	6.0	17	5.2	2.9	2.3	1	1	1	2	2	2	0	BED	zinc	finger
UPF0547	PF10571.4	gi|118575605|ref|YP_875348.1|	-	0.73	9.5	4.6	2.3	7.9	0.2	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
ADK_lid	PF05191.9	gi|118575605|ref|YP_875348.1|	-	0.75	9.5	5.9	2.7	7.7	0.2	2.4	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF3505	PF12013.3	gi|118575605|ref|YP_875348.1|	-	0.8	9.9	3.1	2	8.7	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3505)
OrfB_Zn_ribbon	PF07282.6	gi|118575605|ref|YP_875348.1|	-	1	9.0	4.0	6.1	6.5	2.8	2.0	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-H2C2_2	PF13465.1	gi|118575605|ref|YP_875348.1|	-	1.2	9.5	11.8	0.37	11.1	1.3	2.8	3	0	0	3	3	3	0	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.2	gi|118575605|ref|YP_875348.1|	-	1.3	8.9	7.1	5.9	6.7	4.9	2.0	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Mu-like_Com	PF10122.4	gi|118575605|ref|YP_875348.1|	-	1.3	8.1	5.2	1.9	7.6	0.3	2.4	2	1	0	2	2	2	0	Mu-like	prophage	protein	Com
FYVE	PF01363.16	gi|118575605|ref|YP_875348.1|	-	1.5	8.7	4.8	6.1	6.8	0.3	2.0	1	1	1	2	2	2	0	FYVE	zinc	finger
zf-C2HC_2	PF13913.1	gi|118575605|ref|YP_875348.1|	-	2	8.1	6.5	3.8	7.3	0.6	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
DUF1059	PF06348.6	gi|118575605|ref|YP_875348.1|	-	2.2	8.1	5.2	0.9	9.4	0.3	2.3	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF1059)
zf-CCHC_5	PF14787.1	gi|118575605|ref|YP_875348.1|	-	5.9	6.4	8.3	8	6.0	0.8	2.4	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
DZR	PF12773.2	gi|118575606|ref|YP_875349.1|	-	0.0034	17.1	16.5	0.11	12.2	2.7	3.5	1	1	1	2	2	2	1	Double	zinc	ribbon
FYVE	PF01363.16	gi|118575606|ref|YP_875349.1|	-	0.006	16.4	22.3	1.1	9.1	6.5	3.9	1	1	1	2	2	2	1	FYVE	zinc	finger
zf-C4pol	PF14260.1	gi|118575606|ref|YP_875349.1|	-	0.014	15.3	8.0	0.12	12.3	0.7	3.3	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DUF983	PF06170.7	gi|118575606|ref|YP_875349.1|	-	0.016	15.2	3.1	5.1	7.2	0.1	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF983)
zf-CGNR	PF11706.3	gi|118575606|ref|YP_875349.1|	-	0.022	14.2	1.5	0.022	14.2	1.0	3.4	2	1	1	3	3	2	0	CGNR	zinc	finger
DUF2256	PF10013.4	gi|118575606|ref|YP_875349.1|	-	0.045	13.5	2.5	0.045	13.5	1.7	3.9	4	0	0	4	4	4	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Cytochrome_C7	PF14522.1	gi|118575606|ref|YP_875349.1|	-	0.052	13.1	19.2	0.061	12.9	6.6	2.9	1	1	2	3	3	3	0	Cytochrome	c7
zf-CHY	PF05495.7	gi|118575606|ref|YP_875349.1|	-	0.27	11.4	20.0	1.5	9.0	5.6	2.8	2	1	0	2	2	2	0	CHY	zinc	finger
GATA	PF00320.22	gi|118575606|ref|YP_875349.1|	-	0.68	9.3	22.4	0.14	11.4	2.1	4.6	3	2	2	5	5	5	0	GATA	zinc	finger
zf-NADH-PPase	PF09297.6	gi|118575606|ref|YP_875349.1|	-	0.69	9.4	0.1	0.69	9.4	0.1	4.0	4	0	0	4	4	4	0	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|118575606|ref|YP_875349.1|	-	0.95	9.2	0.1	0.95	9.2	0.1	4.6	5	1	0	5	5	5	0	Nudix	N-terminal
Ribosomal_S14	PF00253.16	gi|118575606|ref|YP_875349.1|	-	1.3	8.4	0.0	1.3	8.4	0.0	3.9	3	2	0	3	3	3	0	Ribosomal	protein	S14p/S29e
zf-ribbon_3	PF13248.1	gi|118575606|ref|YP_875349.1|	-	1.6	8.0	8.3	6.3	6.1	0.7	3.7	3	1	0	3	3	3	0	zinc-ribbon	domain
FYVE_2	PF02318.11	gi|118575606|ref|YP_875349.1|	-	2.1	8.2	13.6	3	7.7	3.8	2.4	1	1	0	2	2	2	0	FYVE-type	zinc	finger
Cytochrom_c3_2	PF14537.1	gi|118575606|ref|YP_875349.1|	-	2.3	8.6	17.0	0.15	12.4	5.5	2.9	1	1	1	2	2	2	0	Cytochrome	c3
zf-HIT	PF04438.11	gi|118575606|ref|YP_875349.1|	-	2.9	7.6	15.9	2.6	7.7	0.0	4.3	5	0	0	5	5	4	0	HIT	zinc	finger
Lysine_decarbox	PF03641.9	gi|118575608|ref|YP_875351.1|	-	1.2e-05	25.1	0.0	4.1e-05	23.3	0.0	1.9	2	1	0	2	2	2	1	Possible	lysine	decarboxylase
DNA_processg_A	PF02481.10	gi|118575608|ref|YP_875351.1|	-	0.00015	20.7	1.1	0.0084	15.0	0.3	2.2	2	0	0	2	2	2	2	DNA	recombination-mediator	protein	A
DAGK_cat	PF00781.19	gi|118575608|ref|YP_875351.1|	-	0.015	14.7	2.4	0.084	12.3	0.1	2.1	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
MoCo_carrier	PF12694.2	gi|118575608|ref|YP_875351.1|	-	0.016	14.6	0.2	0.028	13.8	0.1	1.4	1	1	0	1	1	1	0	Putative	molybdenum	carrier
UPF0150	PF03681.10	gi|118575608|ref|YP_875351.1|	-	0.13	11.9	0.0	0.25	11.0	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0150)
3HCDH_N	PF02737.13	gi|118575609|ref|YP_875352.1|	-	6.4e-61	205.1	0.0	9.5e-61	204.5	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|118575609|ref|YP_875352.1|	-	2.2e-37	127.3	0.7	1.9e-27	95.5	0.1	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
zf-BED	PF02892.10	gi|118575611|ref|YP_875354.1|	-	0.00059	19.5	0.5	0.0008	19.1	0.4	1.2	1	0	0	1	1	1	1	BED	zinc	finger
zf-C2H2_2	PF12756.2	gi|118575611|ref|YP_875354.1|	-	0.0073	16.3	0.1	0.0073	16.3	0.1	1.0	1	0	0	1	1	1	1	C2H2	type	zinc-finger	(2	copies)
zf-C2H2	PF00096.21	gi|118575611|ref|YP_875354.1|	-	0.0097	16.2	0.2	0.013	15.7	0.2	1.2	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
Ribosomal_L37e	PF01907.14	gi|118575611|ref|YP_875354.1|	-	0.043	13.6	0.3	0.055	13.2	0.2	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L37e
DUF1644	PF07800.7	gi|118575611|ref|YP_875354.1|	-	0.061	13.1	0.2	0.069	13.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1644)
zf-C2H2_4	PF13894.1	gi|118575611|ref|YP_875354.1|	-	0.11	12.8	0.2	0.16	12.3	0.1	1.3	1	0	0	1	1	1	0	C2H2-type	zinc	finger
ADK_lid	PF05191.9	gi|118575611|ref|YP_875354.1|	-	0.14	11.8	0.3	0.26	10.9	0.2	1.5	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-H2C2_5	PF13909.1	gi|118575611|ref|YP_875354.1|	-	0.46	10.8	2.1	1.1	9.6	0.1	2.0	2	0	0	2	2	2	0	C2H2-type	zinc-finger	domain
zf-H2C2_2	PF13465.1	gi|118575611|ref|YP_875354.1|	-	1.1	9.7	3.8	5.4	7.4	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
HIT	PF01230.18	gi|118575613|ref|YP_875356.1|	-	5.2e-21	75.0	0.0	6.1e-21	74.7	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|118575613|ref|YP_875356.1|	-	6e-10	39.3	0.0	7.5e-10	39.0	0.0	1.1	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|118575613|ref|YP_875356.1|	-	0.0014	18.2	0.0	0.0018	17.9	0.0	1.1	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DnaJ	PF00226.26	gi|118575614|ref|YP_875357.1|	-	2.8e-14	52.5	0.0	5.5e-14	51.6	0.0	1.4	1	0	0	1	1	1	1	DnaJ	domain
Fer4_15	PF13459.1	gi|118575614|ref|YP_875357.1|	-	6.2e-12	45.9	0.4	1.5e-11	44.7	0.3	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|118575614|ref|YP_875357.1|	-	7.3e-10	39.0	0.3	1.8e-09	37.7	0.2	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_19	PF06902.6	gi|118575614|ref|YP_875357.1|	-	3e-06	26.9	0.5	6.7e-06	25.8	0.3	1.6	1	0	0	1	1	1	1	Divergent	4Fe-4S	mono-cluster
Fer4_7	PF12838.2	gi|118575614|ref|YP_875357.1|	-	0.0019	18.5	0.6	0.031	14.6	0.1	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|118575614|ref|YP_875357.1|	-	0.0076	15.8	4.4	0.058	13.0	0.6	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|118575614|ref|YP_875357.1|	-	0.013	15.7	1.2	0.047	13.9	0.7	2.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118575614|ref|YP_875357.1|	-	0.019	14.8	0.3	0.052	13.4	0.2	1.8	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|118575614|ref|YP_875357.1|	-	0.031	14.0	1.3	0.092	12.5	0.9	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|118575614|ref|YP_875357.1|	-	0.09	12.6	2.3	0.62	10.0	0.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
eIF-5a	PF01287.15	gi|118575615|ref|YP_875358.1|	-	1.7e-12	47.0	3.4	2.4e-12	46.6	2.3	1.2	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|118575615|ref|YP_875358.1|	-	0.0055	16.5	0.1	0.18	11.6	0.0	2.4	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
ATP_bind_4	PF01902.12	gi|118575616|ref|YP_875359.1|	-	1e-53	181.9	0.0	1.2e-53	181.7	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
tRNA_Me_trans	PF03054.11	gi|118575616|ref|YP_875359.1|	-	0.18	10.2	0.0	0.25	9.8	0.0	1.1	1	0	0	1	1	1	0	tRNA	methyl	transferase
SRP54	PF00448.17	gi|118575617|ref|YP_875360.1|	-	8.5e-64	214.6	0.1	1.3e-63	214.0	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|118575617|ref|YP_875360.1|	-	6.4e-27	93.8	0.0	1.5e-26	92.6	0.0	1.7	1	0	0	1	1	1	1	Signal	peptide	binding	domain
CbiA	PF01656.18	gi|118575617|ref|YP_875360.1|	-	8.9e-08	31.7	0.3	4.2e-07	29.5	0.2	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArgK	PF03308.11	gi|118575617|ref|YP_875360.1|	-	1.2e-05	24.3	0.1	5.4e-05	22.1	0.1	1.9	2	0	0	2	2	2	1	ArgK	protein
AAA_16	PF13191.1	gi|118575617|ref|YP_875360.1|	-	0.00069	19.6	0.0	0.0014	18.6	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
APS_kinase	PF01583.15	gi|118575617|ref|YP_875360.1|	-	0.00086	18.9	0.1	0.0017	18.0	0.1	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
MobB	PF03205.9	gi|118575617|ref|YP_875360.1|	-	0.001	18.7	0.4	0.0021	17.7	0.3	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|118575617|ref|YP_875360.1|	-	0.0014	18.0	0.0	0.0032	16.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|118575617|ref|YP_875360.1|	-	0.0015	18.4	0.0	0.0039	17.1	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_17	PF13207.1	gi|118575617|ref|YP_875360.1|	-	0.0018	19.0	0.5	0.0081	16.9	0.3	2.2	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|118575617|ref|YP_875360.1|	-	0.0031	17.8	0.1	0.045	14.0	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_33	PF13671.1	gi|118575617|ref|YP_875360.1|	-	0.0039	17.0	0.0	0.0068	16.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
SRP54_N	PF02881.14	gi|118575617|ref|YP_875360.1|	-	0.0069	16.4	0.0	0.017	15.1	0.0	1.7	1	0	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_29	PF13555.1	gi|118575617|ref|YP_875360.1|	-	0.0072	15.8	0.2	0.016	14.6	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
KTI12	PF08433.5	gi|118575617|ref|YP_875360.1|	-	0.0079	15.4	0.0	0.012	14.7	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_31	PF13614.1	gi|118575617|ref|YP_875360.1|	-	0.0087	16.0	0.0	0.039	13.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|118575617|ref|YP_875360.1|	-	0.01	15.2	0.5	0.021	14.1	0.3	1.5	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_5	PF07728.9	gi|118575617|ref|YP_875360.1|	-	0.011	15.4	0.0	0.024	14.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
6PF2K	PF01591.13	gi|118575617|ref|YP_875360.1|	-	0.012	14.7	0.0	0.019	14.0	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
MipZ	PF09140.6	gi|118575617|ref|YP_875360.1|	-	0.015	14.4	0.2	1	8.3	0.2	2.2	1	1	0	1	1	1	0	ATPase	MipZ
cobW	PF02492.14	gi|118575617|ref|YP_875360.1|	-	0.015	14.7	0.3	0.058	12.8	0.2	1.8	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|118575617|ref|YP_875360.1|	-	0.023	15.0	0.4	0.023	15.0	0.3	2.1	2	1	0	2	2	1	0	AAA	domain
AAA_10	PF12846.2	gi|118575617|ref|YP_875360.1|	-	0.024	14.0	0.2	0.039	13.3	0.2	1.7	1	1	0	1	1	1	0	AAA-like	domain
PduV-EutP	PF10662.4	gi|118575617|ref|YP_875360.1|	-	0.03	13.8	0.3	3.8	6.9	0.1	2.3	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_26	PF13500.1	gi|118575617|ref|YP_875360.1|	-	0.042	13.4	0.1	2.1	7.9	0.2	2.4	2	1	0	2	2	2	0	AAA	domain
G-alpha	PF00503.15	gi|118575617|ref|YP_875360.1|	-	0.05	12.2	0.1	0.074	11.7	0.1	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
Arf	PF00025.16	gi|118575617|ref|YP_875360.1|	-	0.075	12.2	0.1	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	ADP-ribosylation	factor	family
NTPase_1	PF03266.10	gi|118575617|ref|YP_875360.1|	-	0.079	12.6	0.6	0.25	11.0	0.3	1.9	1	1	1	2	2	2	0	NTPase
ATP_bind_1	PF03029.12	gi|118575617|ref|YP_875360.1|	-	0.085	12.3	0.1	0.15	11.5	0.1	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Mur_ligase_M	PF08245.7	gi|118575617|ref|YP_875360.1|	-	0.14	12.1	0.0	0.35	10.9	0.0	1.6	2	0	0	2	2	1	0	Mur	ligase	middle	domain
Peptidase_M43	PF05572.8	gi|118575620|ref|YP_875363.1|	-	0.021	14.4	0.0	0.031	13.8	0.0	1.2	1	0	0	1	1	1	0	Pregnancy-associated	plasma	protein-A
Ribosomal_S27	PF01599.14	gi|118575621|ref|YP_875364.1|	-	7.1e-18	64.1	4.8	8.8e-18	63.8	3.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27a
GCC2_GCC3	PF07699.8	gi|118575621|ref|YP_875364.1|	-	0.0002	20.8	0.7	0.00024	20.6	0.5	1.2	1	0	0	1	1	1	1	GCC2	and	GCC3
Nudix_N_2	PF14803.1	gi|118575621|ref|YP_875364.1|	-	0.0034	17.0	2.5	0.21	11.2	0.1	2.2	2	0	0	2	2	2	1	Nudix	N-terminal
A2L_zn_ribbon	PF08792.5	gi|118575621|ref|YP_875364.1|	-	0.0052	16.2	0.6	0.0082	15.5	0.4	1.3	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|118575621|ref|YP_875364.1|	-	0.0066	16.2	3.6	0.0097	15.6	2.5	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L37e
HypA	PF01155.14	gi|118575621|ref|YP_875364.1|	-	0.0076	15.9	0.6	0.0081	15.8	0.4	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
C1_1	PF00130.17	gi|118575621|ref|YP_875364.1|	-	0.021	14.5	1.8	0.026	14.2	1.2	1.1	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-CCHC_5	PF14787.1	gi|118575621|ref|YP_875364.1|	-	0.024	14.1	0.4	0.024	14.1	0.3	2.0	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
zf-TFIIIC	PF12660.2	gi|118575621|ref|YP_875364.1|	-	0.024	14.5	0.8	0.024	14.5	0.5	1.1	1	0	0	1	1	1	0	Putative	zinc-finger	of	transcription	factor	IIIC	complex
zinc_ribbon_2	PF13240.1	gi|118575621|ref|YP_875364.1|	-	0.028	13.9	1.9	0.5	9.9	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|118575621|ref|YP_875364.1|	-	0.028	14.2	0.8	0.041	13.7	0.5	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
GFA	PF04828.9	gi|118575621|ref|YP_875364.1|	-	0.052	13.4	2.4	0.2	11.6	0.1	1.9	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
NCD3G	PF07562.9	gi|118575621|ref|YP_875364.1|	-	0.061	13.0	0.2	0.069	12.8	0.2	1.2	1	0	0	1	1	1	0	Nine	Cysteines	Domain	of	family	3	GPCR
zf-CHY	PF05495.7	gi|118575621|ref|YP_875364.1|	-	0.072	13.2	0.3	0.076	13.1	0.2	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
ADK_lid	PF05191.9	gi|118575621|ref|YP_875364.1|	-	0.093	12.4	4.6	3.8	7.2	1.0	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF2072	PF09845.4	gi|118575621|ref|YP_875364.1|	-	0.096	12.6	4.2	0.13	12.2	2.9	1.2	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS91	PF14319.1	gi|118575621|ref|YP_875364.1|	-	0.13	11.7	0.7	0.12	11.8	0.5	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
DUF1451	PF07295.6	gi|118575621|ref|YP_875364.1|	-	0.17	11.6	0.9	0.18	11.6	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
DUF1936	PF09151.5	gi|118575621|ref|YP_875364.1|	-	0.17	11.3	1.2	1.9	8.0	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
RRN7	PF11781.3	gi|118575621|ref|YP_875364.1|	-	0.25	10.8	5.4	4.4	6.8	1.4	3.0	2	1	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zf-C2H2	PF00096.21	gi|118575621|ref|YP_875364.1|	-	1.3	9.5	4.0	6.8	7.2	0.3	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-ribbon_3	PF13248.1	gi|118575621|ref|YP_875364.1|	-	1.4	8.1	5.0	5.8	6.2	0.3	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-CCHC_4	PF14392.1	gi|118575621|ref|YP_875364.1|	-	1.6	8.4	4.7	4	7.1	0.8	2.3	2	0	0	2	2	2	0	Zinc	knuckle
zf-C2H2_3	PF13878.1	gi|118575621|ref|YP_875364.1|	-	1.7	8.2	5.7	7.5	6.2	0.5	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-C2H2_4	PF13894.1	gi|118575621|ref|YP_875364.1|	-	2	8.9	4.6	31	5.2	3.2	2.3	1	1	0	1	1	1	0	C2H2-type	zinc	finger
zf-NADH-PPase	PF09297.6	gi|118575621|ref|YP_875364.1|	-	2.8	7.5	7.2	17	5.0	5.0	2.2	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|118575621|ref|YP_875364.1|	-	3	7.7	5.7	4.6	7.1	3.6	1.6	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
GXGXG	PF01493.14	gi|118575622|ref|YP_875365.1|	-	0.027	13.4	0.0	0.036	13.0	0.0	1.2	1	0	0	1	1	1	0	GXGXG	motif
Ribosomal_S24e	PF01282.14	gi|118575622|ref|YP_875365.1|	-	0.044	13.5	0.3	0.11	12.2	0.2	1.7	1	1	0	1	1	1	0	Ribosomal	protein	S24e
RNase_H2-Ydr279	PF09468.5	gi|118575622|ref|YP_875365.1|	-	0.23	10.6	2.3	0.27	10.3	1.6	1.1	1	0	0	1	1	1	0	Ydr279p	protein	family	(RNase	H2	complex	component)
Myco_arth_vir_N	PF09610.5	gi|118575624|ref|YP_875367.1|	-	0.1	12.5	0.3	0.2	11.6	0.2	1.5	1	0	0	1	1	1	0	Mycoplasma	virulence	signal	region	(Myco_arth_vir_N)
TetR_C_5	PF08360.6	gi|118575624|ref|YP_875367.1|	-	0.11	12.5	0.1	0.14	12.1	0.1	1.3	1	0	0	1	1	1	0	QacR-like	protein,	C-terminal	region
DUF309	PF03745.9	gi|118575626|ref|YP_875369.1|	-	8.9e-20	69.9	0.1	1.4e-19	69.3	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
PhosphMutase	PF10143.4	gi|118575627|ref|YP_875370.1|	-	2e-42	144.7	0.0	3.2e-42	144.1	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|118575627|ref|YP_875370.1|	-	3.2e-28	98.8	0.0	5.7e-28	97.9	0.0	1.3	1	1	0	1	1	1	1	Metalloenzyme	superfamily
GalP_UDP_transf	PF01087.17	gi|118575628|ref|YP_875371.1|	-	4.4e-10	39.9	0.0	7.2e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	N-terminal	domain
HIT	PF01230.18	gi|118575628|ref|YP_875371.1|	-	1.9e-05	25.0	0.0	0.0094	16.4	0.0	2.4	2	0	0	2	2	2	2	HIT	domain
zf-Di19	PF05605.7	gi|118575628|ref|YP_875371.1|	-	0.053	13.6	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF2339	PF10101.4	gi|118575629|ref|YP_875372.1|	-	0.0052	15.1	0.2	0.0054	15.0	0.2	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2339)
Cation_efflux	PF01545.16	gi|118575629|ref|YP_875372.1|	-	0.055	12.5	0.3	0.055	12.5	0.2	2.0	1	1	1	2	2	2	0	Cation	efflux	family
NfeD	PF01957.13	gi|118575629|ref|YP_875372.1|	-	0.11	12.6	0.3	0.11	12.6	0.2	2.2	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
MFS_1	PF07690.11	gi|118575629|ref|YP_875372.1|	-	0.61	8.7	14.3	11	4.5	10.7	1.8	1	1	1	2	2	2	0	Major	Facilitator	Superfamily
7TMR-DISM_7TM	PF07695.6	gi|118575629|ref|YP_875372.1|	-	5.2	6.6	11.1	1.5e+02	1.9	8.4	2.3	1	1	1	2	2	2	0	7TM	diverse	intracellular	signalling
DUF2975	PF11188.3	gi|118575629|ref|YP_875372.1|	-	5.9	6.6	10.1	0.3	10.7	0.3	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2975)
YajC	PF02699.10	gi|118575629|ref|YP_875372.1|	-	9.8	5.9	7.8	1.7	8.3	0.2	2.7	3	0	0	3	3	3	0	Preprotein	translocase	subunit
Acetyltransf_1	PF00583.19	gi|118575630|ref|YP_875373.1|	-	1.2e-14	54.1	0.2	1.6e-14	53.6	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|118575630|ref|YP_875373.1|	-	8e-14	51.5	0.0	1e-13	51.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|118575630|ref|YP_875373.1|	-	1.7e-09	37.7	0.0	2.2e-09	37.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|118575630|ref|YP_875373.1|	-	2.9e-07	30.3	0.0	3.2e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|118575630|ref|YP_875373.1|	-	0.00086	19.1	0.7	0.002	17.9	0.3	1.8	1	1	0	1	1	1	1	GCN5-related	N-acetyl-transferase
NTP_transferase	PF00483.18	gi|118575631|ref|YP_875374.1|	-	9.5e-25	87.3	0.0	1.1e-24	87.0	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|118575631|ref|YP_875374.1|	-	0.0083	16.2	0.0	0.01	15.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Peripla_BP_2	PF01497.13	gi|118575632|ref|YP_875375.1|	-	2.2e-35	121.9	0.0	2.5e-35	121.7	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
DM	PF00751.13	gi|118575633|ref|YP_875376.1|	-	0.1	12.1	0.4	0.16	11.4	0.3	1.3	1	0	0	1	1	1	0	DM	DNA	binding	domain
DUF650	PF04894.7	gi|118575634|ref|YP_875377.1|	-	3.4e-80	269.4	0.0	4.5e-80	269.0	0.0	1.1	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|118575634|ref|YP_875377.1|	-	1.1e-33	115.1	0.0	1.7e-33	114.5	0.0	1.3	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
FlgD_ig	PF13860.1	gi|118575635|ref|YP_875378.1|	-	1.6e-05	24.5	3.6	0.0015	18.1	0.1	3.0	2	1	0	2	2	2	2	FlgD	Ig-like	domain
NPCBM_assoc	PF10633.4	gi|118575635|ref|YP_875378.1|	-	0.011	15.8	0.9	1.1	9.3	0.0	3.3	3	1	0	3	3	3	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Big_3_4	PF13754.1	gi|118575635|ref|YP_875378.1|	-	0.015	15.6	7.4	0.98	9.7	0.1	4.2	2	2	2	4	4	4	0	Bacterial	Ig-like	domain	(group	3)
CxxCxxCC	PF03692.10	gi|118575638|ref|YP_875381.1|	-	1.6e-08	34.8	0.0	3.9e-08	33.6	0.0	1.7	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Ribosomal_S7	PF00177.16	gi|118575639|ref|YP_875382.1|	-	5.1e-38	129.9	0.6	7.5e-38	129.4	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
Ribosom_S12_S23	PF00164.20	gi|118575640|ref|YP_875383.1|	-	1.4e-38	131.0	0.6	1.8e-38	130.7	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.12	gi|118575641|ref|YP_875384.1|	-	3.6e-21	74.4	5.9	1.1e-13	50.5	0.5	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|118575641|ref|YP_875384.1|	-	3.8e-14	52.0	1.1	2.2e-06	27.2	0.2	2.2	2	0	0	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|118575641|ref|YP_875384.1|	-	1.4e-10	40.7	2.5	6.7e-10	38.6	0.1	2.2	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.24	gi|118575641|ref|YP_875384.1|	-	3.2e-08	33.0	2.6	0.001	18.6	0.1	2.5	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|118575641|ref|YP_875384.1|	-	0.024	14.2	7.9	0.083	12.5	0.6	3.0	3	0	0	3	3	3	0	KH	domain
Thymopoietin	PF08198.6	gi|118575641|ref|YP_875384.1|	-	0.052	13.0	0.1	0.1	12.1	0.1	1.5	1	0	0	1	1	1	0	Thymopoietin	protein
DUF310	PF03750.8	gi|118575641|ref|YP_875384.1|	-	0.052	13.7	0.1	0.078	13.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF310)
Ribosomal_L7Ae	PF01248.21	gi|118575642|ref|YP_875385.1|	-	4.5e-07	29.2	0.0	5.5e-07	29.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
Methyltransf_3	PF01596.12	gi|118575643|ref|YP_875386.1|	-	8.7e-33	113.0	0.0	1e-32	112.8	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_24	PF13578.1	gi|118575643|ref|YP_875386.1|	-	8e-19	68.4	0.0	1.4e-18	67.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575643|ref|YP_875386.1|	-	5.3e-10	39.8	0.1	7.7e-10	39.3	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118575643|ref|YP_875386.1|	-	1.5e-07	31.4	0.0	3.6e-07	30.2	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575643|ref|YP_875386.1|	-	0.00013	21.6	0.0	0.00017	21.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|118575643|ref|YP_875386.1|	-	0.00017	21.2	0.0	0.00029	20.4	0.0	1.4	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.7	gi|118575643|ref|YP_875386.1|	-	0.0047	17.3	0.0	0.01	16.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118575643|ref|YP_875386.1|	-	0.035	13.4	0.0	0.07	12.5	0.0	1.4	1	1	0	1	1	1	0	Conserved	hypothetical	protein	95
CmcI	PF04989.7	gi|118575643|ref|YP_875386.1|	-	0.055	12.7	0.0	0.076	12.3	0.0	1.2	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
UPF0020	PF01170.13	gi|118575643|ref|YP_875386.1|	-	0.084	12.4	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|118575643|ref|YP_875386.1|	-	0.086	13.2	0.0	0.13	12.6	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
ParBc	PF02195.13	gi|118575644|ref|YP_875387.1|	-	1.1e-19	70.3	0.3	2.9e-19	68.9	0.1	1.9	2	0	0	2	2	2	1	ParB-like	nuclease	domain
KorB	PF08535.5	gi|118575644|ref|YP_875387.1|	-	0.0003	20.8	0.0	0.0016	18.5	0.0	2.2	2	1	0	2	2	2	1	KorB	domain
UreD	PF01774.12	gi|118575645|ref|YP_875388.1|	-	1.5e-47	161.8	0.0	1.7e-47	161.5	0.0	1.1	1	0	0	1	1	1	1	UreD	urease	accessory	protein
cobW	PF02492.14	gi|118575646|ref|YP_875389.1|	-	3.4e-31	108.0	0.0	3.9e-31	107.8	0.0	1.0	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
ArgK	PF03308.11	gi|118575646|ref|YP_875389.1|	-	6e-09	35.0	2.2	1.9e-08	33.4	1.6	1.7	1	1	0	1	1	1	1	ArgK	protein
MobB	PF03205.9	gi|118575646|ref|YP_875389.1|	-	5.7e-07	29.3	0.0	1.1e-06	28.3	0.0	1.6	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|118575646|ref|YP_875389.1|	-	0.018	14.4	0.0	0.022	14.1	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
NTPase_1	PF03266.10	gi|118575646|ref|YP_875389.1|	-	0.039	13.6	0.0	0.063	12.9	0.0	1.3	1	0	0	1	1	1	0	NTPase
Mg_chelatase	PF01078.16	gi|118575646|ref|YP_875389.1|	-	0.072	12.2	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|118575646|ref|YP_875389.1|	-	0.099	12.5	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|118575646|ref|YP_875389.1|	-	0.1	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|118575646|ref|YP_875389.1|	-	0.13	11.7	0.0	0.21	11.1	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
UreF	PF01730.11	gi|118575647|ref|YP_875390.1|	-	4e-25	88.6	0.0	4.9e-25	88.3	0.0	1.1	1	0	0	1	1	1	1	UreF
UreE_N	PF02814.10	gi|118575648|ref|YP_875391.1|	-	9.5e-12	44.2	0.4	1.7e-11	43.4	0.3	1.4	1	0	0	1	1	1	1	UreE	urease	accessory	protein,	N-terminal	domain
UreE_C	PF05194.7	gi|118575648|ref|YP_875391.1|	-	8.3e-06	25.8	0.0	1.3e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	UreE	urease	accessory	protein,	C-terminal	domain
Glucokinase	PF02685.11	gi|118575648|ref|YP_875391.1|	-	0.14	10.9	0.1	0.27	9.9	0.0	1.4	1	1	0	1	1	1	0	Glucokinase
Urease_gamma	PF00547.13	gi|118575649|ref|YP_875392.1|	-	5.1e-43	145.1	0.0	5.7e-43	144.9	0.0	1.0	1	0	0	1	1	1	1	Urease,	gamma	subunit
Imm49	PF15660.1	gi|118575649|ref|YP_875392.1|	-	0.039	13.9	0.0	0.067	13.2	0.0	1.3	1	0	0	1	1	1	0	Immunity	protein	49
Urease_beta	PF00699.15	gi|118575650|ref|YP_875393.1|	-	1.1e-41	140.7	0.0	1.4e-41	140.4	0.0	1.1	1	0	0	1	1	1	1	Urease	beta	subunit
Amidohydro_1	PF01979.15	gi|118575651|ref|YP_875394.1|	-	2.5e-62	211.4	3.8	3.2e-62	211.1	2.6	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Urease_alpha	PF00449.15	gi|118575651|ref|YP_875394.1|	-	1.8e-46	157.2	3.0	3.7e-46	156.2	2.1	1.5	1	0	0	1	1	1	1	Urease	alpha-subunit,	N-terminal	domain
Amidohydro_3	PF07969.6	gi|118575651|ref|YP_875394.1|	-	8.3e-06	25.2	6.9	0.0051	16.0	1.9	2.2	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|118575651|ref|YP_875394.1|	-	1.2e-05	24.9	2.5	4.8e-05	23.0	1.7	2.0	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|118575651|ref|YP_875394.1|	-	0.00088	19.3	1.5	0.045	13.7	1.1	2.7	1	1	0	1	1	1	1	Amidohydrolase
SSF	PF00474.12	gi|118575652|ref|YP_875395.1|	-	1.1e-21	77.0	39.9	1.6e-21	76.4	27.6	1.2	1	0	0	1	1	1	1	Sodium:solute	symporter	family
DUF981	PF06168.6	gi|118575653|ref|YP_875396.1|	-	0.0069	16.1	1.3	0.01	15.6	0.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
C1_1	PF00130.17	gi|118575653|ref|YP_875396.1|	-	0.012	15.3	5.3	0.12	12.0	0.1	2.3	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF4040	PF13244.1	gi|118575653|ref|YP_875396.1|	-	0.04	13.8	0.9	0.066	13.1	0.6	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4040)
zf-SNAP50_C	PF12251.3	gi|118575653|ref|YP_875396.1|	-	0.21	10.9	2.0	6.2	6.1	0.1	2.3	1	1	2	3	3	3	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
TF_Zn_Ribbon	PF08271.7	gi|118575653|ref|YP_875396.1|	-	1.1	8.5	4.1	5.8	6.3	0.0	3.1	4	0	0	4	4	4	0	TFIIB	zinc-binding
zf-FCS	PF06467.9	gi|118575653|ref|YP_875396.1|	-	1.8	8.3	11.6	0.25	11.0	0.8	2.7	3	0	0	3	3	3	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
FYVE	PF01363.16	gi|118575653|ref|YP_875396.1|	-	2.5	8.0	5.9	8.7	6.3	4.1	1.9	1	1	0	1	1	1	0	FYVE	zinc	finger
DZR	PF12773.2	gi|118575653|ref|YP_875396.1|	-	2.6	7.9	6.8	2.5e+02	1.5	4.7	2.8	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF4095	PF13338.1	gi|118575654|ref|YP_875397.1|	-	1.3e-21	77.0	0.0	1.9e-21	76.4	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4095)
HTH_36	PF13730.1	gi|118575654|ref|YP_875397.1|	-	0.00074	19.5	0.0	0.0027	17.7	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|118575654|ref|YP_875397.1|	-	0.0032	16.8	0.0	0.008	15.5	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|118575654|ref|YP_875397.1|	-	0.025	14.2	0.0	0.048	13.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
MarR	PF01047.17	gi|118575654|ref|YP_875397.1|	-	0.1	12.3	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Penicillinase_R	PF03965.11	gi|118575654|ref|YP_875397.1|	-	0.16	12.0	0.0	0.32	11.0	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
DUF1814	PF08843.6	gi|118575655|ref|YP_875398.1|	-	3.4e-23	82.6	0.1	3.9e-23	82.4	0.1	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
OHCU_decarbox	PF09349.5	gi|118575657|ref|YP_875400.1|	-	0.066	13.5	0.2	0.27	11.5	0.0	2.0	2	0	0	2	2	2	0	OHCU	decarboxylase
PIN	PF01850.16	gi|118575659|ref|YP_875402.1|	-	5.1e-05	23.5	0.0	0.00032	21.0	0.0	2.0	1	1	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|118575659|ref|YP_875402.1|	-	0.043	13.5	0.0	0.059	13.0	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
UvrD-helicase	PF00580.16	gi|118575660|ref|YP_875403.1|	-	5.4e-53	180.3	0.0	1.2e-27	97.0	0.0	2.3	2	0	0	2	2	2	2	UvrD/REP	helicase	N-terminal	domain
PDDEXK_1	PF12705.2	gi|118575660|ref|YP_875403.1|	-	1.3e-40	139.4	0.0	2.1e-40	138.7	0.0	1.4	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
UvrD_C	PF13361.1	gi|118575660|ref|YP_875403.1|	-	3.4e-37	128.7	0.0	1.3e-36	126.8	0.0	1.9	2	0	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.1	gi|118575660|ref|YP_875403.1|	-	3.2e-13	49.2	0.1	3.2e-12	46.0	0.0	2.7	2	0	0	2	2	2	1	Part	of	AAA	domain
UvrD_C_2	PF13538.1	gi|118575660|ref|YP_875403.1|	-	8.4e-11	41.9	0.2	7.9e-10	38.8	0.2	2.5	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
Viral_helicase1	PF01443.13	gi|118575660|ref|YP_875403.1|	-	8.7e-07	28.6	0.1	1	8.8	0.1	4.0	3	1	0	3	3	3	3	Viral	(Superfamily	1)	RNA	helicase
Cas_Cas4	PF01930.12	gi|118575660|ref|YP_875403.1|	-	1.8e-06	27.9	0.0	1.4e-05	25.0	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF83
AAA_12	PF13087.1	gi|118575660|ref|YP_875403.1|	-	2.9e-05	23.5	0.0	0.00026	20.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
Dna2	PF08696.6	gi|118575660|ref|YP_875403.1|	-	9.7e-05	21.7	0.0	0.00018	20.8	0.0	1.3	1	0	0	1	1	1	1	DNA	replication	factor	Dna2
AAA_11	PF13086.1	gi|118575660|ref|YP_875403.1|	-	0.00022	20.8	0.0	0.00052	19.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|118575660|ref|YP_875403.1|	-	0.0036	16.8	0.0	0.012	15.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|118575660|ref|YP_875403.1|	-	0.0039	16.7	0.0	0.0072	15.8	0.0	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DUF1620	PF07774.8	gi|118575660|ref|YP_875403.1|	-	0.033	13.4	0.1	0.062	12.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1620)
Exonuc_V_gamma	PF04257.9	gi|118575660|ref|YP_875403.1|	-	0.26	9.2	0.0	0.38	8.6	0.0	1.1	1	0	0	1	1	1	0	Exodeoxyribonuclease	V,	gamma	subunit
Ribosomal_L21e	PF01157.13	gi|118575661|ref|YP_875404.1|	-	4.3e-14	52.1	1.0	5.7e-14	51.7	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L21e
RNA_pol_Rpb4	PF03874.11	gi|118575662|ref|YP_875405.1|	-	1.8e-12	47.2	0.4	2.1e-12	47.1	0.3	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
RPAP3_C	PF13877.1	gi|118575662|ref|YP_875405.1|	-	0.021	14.7	0.1	0.048	13.6	0.1	1.6	1	1	0	1	1	1	0	Potential	Monad-binding	region	of	RPAP3
HRDC	PF00570.18	gi|118575662|ref|YP_875405.1|	-	0.2	11.3	0.8	10	5.9	0.0	2.8	2	1	1	3	3	3	0	HRDC	domain
DUF655	PF04919.7	gi|118575663|ref|YP_875406.1|	-	4.9e-48	163.2	0.0	5.5e-48	163.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|118575663|ref|YP_875406.1|	-	0.00081	19.3	0.0	0.0017	18.3	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|118575663|ref|YP_875406.1|	-	0.0095	15.8	0.1	0.02	14.8	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
RrnaAD	PF00398.15	gi|118575664|ref|YP_875407.1|	-	1.6e-25	89.5	0.0	1.9e-25	89.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|118575664|ref|YP_875407.1|	-	3.4e-06	27.0	0.0	4.8e-06	26.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575664|ref|YP_875407.1|	-	3.9e-06	27.4	0.0	5.5e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|118575664|ref|YP_875407.1|	-	7.8e-05	22.3	0.0	0.00011	21.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.1	gi|118575664|ref|YP_875407.1|	-	0.00059	19.5	0.0	0.00092	18.9	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575664|ref|YP_875407.1|	-	0.0016	18.0	0.0	0.0022	17.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|118575664|ref|YP_875407.1|	-	0.0037	16.3	0.0	0.0055	15.8	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.9	gi|118575665|ref|YP_875408.1|	-	2.1e-12	46.7	0.0	2.3e-11	43.3	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|118575665|ref|YP_875408.1|	-	7.6e-10	38.8	0.1	4.2e-09	36.4	0.1	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575665|ref|YP_875408.1|	-	4.5e-06	26.3	0.1	0.003	17.1	0.1	2.1	2	0	0	2	2	2	2	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575665|ref|YP_875408.1|	-	1.4e-05	25.6	0.2	0.00057	20.4	0.2	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118575665|ref|YP_875408.1|	-	0.00048	19.8	0.0	0.015	14.9	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|118575665|ref|YP_875408.1|	-	0.00048	20.5	1.1	0.0021	18.4	0.3	2.2	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118575665|ref|YP_875408.1|	-	0.0063	16.9	0.6	0.018	15.5	0.4	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118575665|ref|YP_875408.1|	-	0.033	14.5	1.6	0.16	12.3	1.1	2.1	1	1	0	1	1	1	0	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|118575665|ref|YP_875408.1|	-	0.035	13.2	0.2	0.07	12.2	0.1	1.7	1	1	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
ACT_7	PF13840.1	gi|118575665|ref|YP_875408.1|	-	0.039	13.4	0.0	0.067	12.7	0.0	1.3	1	0	0	1	1	1	0	ACT	domain
PrmA	PF06325.8	gi|118575665|ref|YP_875408.1|	-	0.14	11.2	0.2	0.25	10.4	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Iso_dh	PF00180.15	gi|118575666|ref|YP_875409.1|	-	3.7e-70	236.6	0.0	4.3e-70	236.3	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Na_Ca_ex	PF01699.19	gi|118575667|ref|YP_875410.1|	-	5.5e-42	142.6	36.4	6.3e-23	80.9	10.4	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
PEP-utilizers_C	PF02896.13	gi|118575668|ref|YP_875411.1|	-	3.9e-92	308.2	0.0	6.1e-92	307.6	0.0	1.3	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PPDK_N	PF01326.14	gi|118575668|ref|YP_875411.1|	-	1.2e-63	215.2	0.0	3.2e-63	213.7	0.0	1.7	1	1	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers	PF00391.18	gi|118575668|ref|YP_875411.1|	-	9e-26	89.2	0.9	2.6e-25	87.7	0.6	1.8	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Phage_connect_1	PF05135.8	gi|118575668|ref|YP_875411.1|	-	0.016	15.3	0.0	0.039	14.1	0.0	1.6	1	0	0	1	1	1	0	Phage	gp6-like	head-tail	connector	protein
HTH_3	PF01381.17	gi|118575669|ref|YP_875412.1|	-	7.5e-14	51.3	1.1	4.6e-13	48.8	0.1	2.3	3	0	0	3	3	3	1	Helix-turn-helix
CBS	PF00571.23	gi|118575669|ref|YP_875412.1|	-	1.4e-13	50.3	0.3	7.9e-09	35.1	0.0	2.4	2	0	0	2	2	2	2	CBS	domain
HTH_31	PF13560.1	gi|118575669|ref|YP_875412.1|	-	1.8e-10	40.8	0.0	4e-10	39.7	0.0	1.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|118575669|ref|YP_875412.1|	-	6e-09	35.8	0.1	1.2e-08	34.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|118575669|ref|YP_875412.1|	-	0.018	14.6	0.0	0.029	14.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|118575669|ref|YP_875412.1|	-	0.024	14.8	0.2	0.067	13.4	0.0	1.8	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_37	PF13744.1	gi|118575669|ref|YP_875412.1|	-	0.024	14.4	0.2	0.054	13.3	0.1	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|118575669|ref|YP_875412.1|	-	0.047	13.4	0.4	0.34	10.7	0.0	2.4	3	0	0	3	3	3	0	Crp-like	helix-turn-helix	domain
Death	PF00531.17	gi|118575669|ref|YP_875412.1|	-	0.069	12.9	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	Death	domain
Sigma70_r4	PF04545.11	gi|118575669|ref|YP_875412.1|	-	0.42	9.9	2.1	1.4	8.2	0.1	2.6	3	0	0	3	3	3	0	Sigma-70,	region	4
Glyoxalase_4	PF13669.1	gi|118575670|ref|YP_875413.1|	-	1.4e-26	92.5	0.0	1.7e-26	92.3	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|118575670|ref|YP_875413.1|	-	1.3e-12	48.0	0.0	1.4e-12	47.8	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|118575670|ref|YP_875413.1|	-	6e-11	42.4	0.0	6.9e-11	42.2	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|118575670|ref|YP_875413.1|	-	3.8e-08	33.8	0.0	4.2e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
MM_CoA_mutase	PF01642.17	gi|118575671|ref|YP_875414.1|	-	5.2e-188	625.3	0.1	6e-188	625.1	0.1	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
ArgK	PF03308.11	gi|118575672|ref|YP_875415.1|	-	1.4e-68	230.6	5.3	1.8e-68	230.2	3.7	1.2	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|118575672|ref|YP_875415.1|	-	3.4e-05	23.3	0.1	0.00012	21.6	0.1	1.8	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|118575672|ref|YP_875415.1|	-	0.00047	20.9	1.1	0.0034	18.2	0.1	2.3	2	0	0	2	2	2	1	AAA	domain
KAP_NTPase	PF07693.9	gi|118575672|ref|YP_875415.1|	-	0.00054	19.0	0.0	0.00066	18.7	0.0	1.2	1	0	0	1	1	1	1	KAP	family	P-loop	domain
AAA_16	PF13191.1	gi|118575672|ref|YP_875415.1|	-	0.0006	19.8	0.2	0.0013	18.7	0.0	1.7	2	1	0	2	2	2	1	AAA	ATPase	domain
MobB	PF03205.9	gi|118575672|ref|YP_875415.1|	-	0.00078	19.1	0.0	0.0056	16.3	0.0	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|118575672|ref|YP_875415.1|	-	0.00082	18.8	0.0	0.0011	18.4	0.0	1.5	1	1	0	1	1	1	1	AAA-like	domain
ATP_bind_1	PF03029.12	gi|118575672|ref|YP_875415.1|	-	0.00085	18.9	0.0	0.076	12.5	0.0	2.2	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
GTP_EFTU	PF00009.22	gi|118575672|ref|YP_875415.1|	-	0.0012	18.3	0.0	0.039	13.3	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_18	PF13238.1	gi|118575672|ref|YP_875415.1|	-	0.0034	17.6	0.9	0.047	14.0	0.1	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|118575672|ref|YP_875415.1|	-	0.0057	16.7	0.0	0.13	12.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|118575672|ref|YP_875415.1|	-	0.0085	15.8	2.0	0.041	13.6	0.1	2.8	3	0	0	3	3	3	1	Part	of	AAA	domain
AAA_29	PF13555.1	gi|118575672|ref|YP_875415.1|	-	0.038	13.5	0.1	0.085	12.4	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|118575672|ref|YP_875415.1|	-	0.047	13.6	0.2	0.082	12.8	0.1	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
PRK	PF00485.13	gi|118575672|ref|YP_875415.1|	-	0.047	13.2	0.2	0.11	11.9	0.1	1.7	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
DUF258	PF03193.11	gi|118575672|ref|YP_875415.1|	-	0.061	12.5	0.0	0.13	11.4	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|118575672|ref|YP_875415.1|	-	0.065	13.5	0.2	0.19	12.0	0.1	1.7	2	0	0	2	2	2	0	ABC	transporter
Arch_ATPase	PF01637.13	gi|118575672|ref|YP_875415.1|	-	0.07	12.8	0.0	0.17	11.5	0.0	1.6	1	0	0	1	1	1	0	Archaeal	ATPase
NB-ARC	PF00931.17	gi|118575672|ref|YP_875415.1|	-	0.11	11.3	0.1	0.27	10.0	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
AAA_23	PF13476.1	gi|118575672|ref|YP_875415.1|	-	0.17	12.2	0.0	0.53	10.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Peptidase_M1	PF01433.15	gi|118575674|ref|YP_875417.1|	-	1.6e-130	435.7	0.0	2e-130	435.3	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M1
ERAP1_C	PF11838.3	gi|118575674|ref|YP_875417.1|	-	6e-53	180.1	0.0	8.7e-53	179.6	0.0	1.2	1	0	0	1	1	1	1	ERAP1-like	C-terminal	domain
Peptidase_MA_2	PF13485.1	gi|118575674|ref|YP_875417.1|	-	7.4e-19	68.0	0.1	1.6e-18	66.9	0.1	1.6	1	0	0	1	1	1	1	Peptidase	MA	superfamily
Defensin_1	PF00323.14	gi|118575676|ref|YP_875419.1|	-	1.1	9.7	6.4	2.3	8.6	4.4	1.5	1	0	0	1	1	1	0	Mammalian	defensin
B12-binding	PF02310.14	gi|118575677|ref|YP_875420.1|	-	8.3e-20	70.8	0.3	9.6e-20	70.6	0.2	1.1	1	0	0	1	1	1	1	B12	binding	domain
Glyco_transf_28	PF03033.15	gi|118575677|ref|YP_875420.1|	-	0.033	13.9	0.2	0.049	13.3	0.1	1.5	1	1	0	1	1	1	0	Glycosyltransferase	family	28	N-terminal	domain
Nitro_FeMo-Co	PF02579.12	gi|118575677|ref|YP_875420.1|	-	0.053	13.5	0.2	2.7	8.1	0.0	2.5	2	1	1	3	3	3	0	Dinitrogenase	iron-molybdenum	cofactor
IMPDH	PF00478.20	gi|118575677|ref|YP_875420.1|	-	0.092	11.6	0.0	0.11	11.3	0.0	1.1	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.16	gi|118575677|ref|YP_875420.1|	-	0.11	11.8	0.4	0.58	9.3	0.1	1.9	1	1	1	2	2	2	0	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|118575677|ref|YP_875420.1|	-	0.13	11.5	1.3	0.21	10.8	0.5	1.6	1	1	1	2	2	2	0	PcrB	family
Peripla_BP_6	PF13458.1	gi|118575678|ref|YP_875421.1|	-	3.6e-26	92.3	0.0	4e-25	88.8	0.0	1.9	1	1	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|118575678|ref|YP_875421.1|	-	5.8e-23	81.2	0.0	1.1e-22	80.3	0.0	1.4	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.1	gi|118575678|ref|YP_875421.1|	-	0.0016	17.2	0.0	0.0021	16.8	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
Peptidase_M3	PF01432.15	gi|118575679|ref|YP_875422.1|	-	3.5e-40	138.4	0.0	5.3e-40	137.8	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M3
Peptidase_M3_N	PF08439.5	gi|118575679|ref|YP_875422.1|	-	1.8e-06	27.9	1.7	1.3e-05	25.1	0.0	3.1	4	0	0	4	4	4	1	Oligopeptidase	F
Ferritin	PF00210.19	gi|118575680|ref|YP_875423.1|	-	1e-18	67.4	0.0	1.3e-18	67.0	0.0	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
T2SS-T3SS_pil_N	PF13629.1	gi|118575682|ref|YP_875425.1|	-	0.07	12.6	0.1	0.2	11.2	0.1	1.8	1	0	0	1	1	1	0	Pilus	formation	protein	N	terminal	region
PvlArgDC	PF01862.11	gi|118575683|ref|YP_875426.1|	-	4.1e-59	198.8	0.0	4.6e-59	198.6	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
Abi	PF02517.11	gi|118575684|ref|YP_875427.1|	-	0.012	15.7	10.3	0.013	15.5	3.0	2.8	3	0	0	3	3	3	0	CAAX	protease	self-immunity
DEAD	PF00270.24	gi|118575685|ref|YP_875428.1|	-	7.5e-48	162.2	0.1	1.6e-46	157.8	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118575685|ref|YP_875428.1|	-	7.4e-25	86.6	0.2	4.9e-24	83.9	0.3	2.2	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
CMS1	PF14617.1	gi|118575685|ref|YP_875428.1|	-	1.1e-05	24.6	0.2	0.011	14.8	0.0	2.7	2	1	0	2	2	2	2	U3-containing	90S	pre-ribosomal	complex	subunit
SNF2_N	PF00176.18	gi|118575685|ref|YP_875428.1|	-	0.00031	19.6	0.0	0.0005	18.9	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
AAA_30	PF13604.1	gi|118575685|ref|YP_875428.1|	-	0.001	18.6	0.3	0.0043	16.6	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|118575685|ref|YP_875428.1|	-	0.003	17.3	0.0	0.0052	16.6	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Ribosomal_S27e	PF01667.12	gi|118575686|ref|YP_875429.1|	-	0.018	14.5	1.2	0.047	13.2	0.8	1.7	1	1	0	1	1	1	0	Ribosomal	protein	S27
zinc_ribbon_4	PF13717.1	gi|118575686|ref|YP_875429.1|	-	0.11	12.2	5.0	0.98	9.1	3.4	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.7	gi|118575686|ref|YP_875429.1|	-	0.12	12.1	0.1	0.17	11.7	0.1	1.2	1	0	0	1	1	1	0	zinc-ribbons
IBR	PF01485.16	gi|118575686|ref|YP_875429.1|	-	0.14	12.0	0.4	0.19	11.6	0.3	1.2	1	0	0	1	1	1	0	IBR	domain
zinc_ribbon_5	PF13719.1	gi|118575686|ref|YP_875429.1|	-	0.17	11.4	5.2	1.4	8.5	3.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|118575686|ref|YP_875429.1|	-	0.19	12.0	1.6	0.65	10.3	1.1	1.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-TFIIB	PF13453.1	gi|118575686|ref|YP_875429.1|	-	0.24	10.6	1.5	0.36	10.0	0.4	1.8	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Mu-like_Com	PF10122.4	gi|118575686|ref|YP_875429.1|	-	2.8	7.0	6.2	0.56	9.3	1.4	1.9	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
PDT	PF00800.13	gi|118575687|ref|YP_875430.1|	-	0.052	13.0	0.0	0.082	12.4	0.0	1.2	1	0	0	1	1	1	0	Prephenate	dehydratase
CSD	PF00313.17	gi|118575691|ref|YP_875434.1|	-	1.2e-22	79.4	0.6	1.4e-22	79.2	0.4	1.1	1	0	0	1	1	1	1	'Cold-shock'	DNA-binding	domain
OB_RNB	PF08206.6	gi|118575691|ref|YP_875434.1|	-	6.3e-05	22.4	0.1	6.8e-05	22.2	0.1	1.1	1	0	0	1	1	1	1	Ribonuclease	B	OB	domain
RskA	PF10099.4	gi|118575692|ref|YP_875435.1|	-	0.1	12.2	0.2	0.18	11.5	0.1	1.3	1	0	0	1	1	1	0	Anti-sigma-K	factor	rskA
Thioredoxin_4	PF13462.1	gi|118575694|ref|YP_875437.1|	-	7.3e-38	130.1	0.0	9.2e-38	129.8	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|118575694|ref|YP_875437.1|	-	7.3e-16	58.2	0.0	4.9e-13	49.0	0.0	2.1	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|118575694|ref|YP_875437.1|	-	3.5e-07	30.3	0.0	1.5e-06	28.3	0.0	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
Glutaredoxin	PF00462.19	gi|118575694|ref|YP_875437.1|	-	0.033	14.1	0.0	3.8	7.5	0.0	2.4	2	0	0	2	2	2	0	Glutaredoxin
Thioredoxin	PF00085.15	gi|118575694|ref|YP_875437.1|	-	0.079	12.6	0.0	0.37	10.4	0.0	1.9	2	0	0	2	2	2	0	Thioredoxin
Thioredoxin_3	PF13192.1	gi|118575694|ref|YP_875437.1|	-	0.12	12.2	0.0	0.26	11.1	0.0	1.6	2	0	0	2	2	2	0	Thioredoxin	domain
Thioredox_DsbH	PF03190.10	gi|118575698|ref|YP_875441.1|	-	2.6e-74	248.3	0.0	3.9e-74	247.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|118575698|ref|YP_875441.1|	-	3.9e-11	42.8	0.0	1.1e-10	41.3	0.0	1.8	2	0	0	2	2	2	1	Thioredoxin-like
C5-epim_C	PF06662.8	gi|118575698|ref|YP_875441.1|	-	3.5e-09	36.2	0.8	0.016	14.5	0.0	3.9	3	1	1	4	4	4	3	D-glucuronyl	C5-epimerase	C-terminus
Glyco_hydro_76	PF03663.9	gi|118575698|ref|YP_875441.1|	-	4.1e-09	36.2	0.0	2.9e-07	30.2	0.0	2.8	2	1	0	2	2	2	1	Glycosyl	hydrolase	family	76
Glyco_hydro_88	PF07470.8	gi|118575698|ref|YP_875441.1|	-	6.7e-07	28.6	0.0	0.076	12.0	0.0	3.3	2	2	1	4	4	4	2	Glycosyl	Hydrolase	Family	88
GlcNAc_2-epim	PF07221.6	gi|118575698|ref|YP_875441.1|	-	7.4e-06	25.2	0.2	0.45	9.4	0.0	3.5	2	1	2	4	4	4	3	N-acylglucosamine	2-epimerase	(GlcNAc	2-epimerase)
Prenyltrans_1	PF13243.1	gi|118575698|ref|YP_875441.1|	-	0.00012	22.0	0.5	0.17	11.8	0.0	3.1	4	0	0	4	4	4	2	Prenyltransferase-like
LANC_like	PF05147.8	gi|118575698|ref|YP_875441.1|	-	0.001	17.7	0.1	0.66	8.4	0.0	3.1	4	0	0	4	4	4	2	Lanthionine	synthetase	C-like	protein
Thioredoxin_2	PF13098.1	gi|118575698|ref|YP_875441.1|	-	0.0039	17.3	0.0	0.018	15.2	0.0	2.1	2	0	0	2	2	2	1	Thioredoxin-like	domain
DUF1680	PF07944.7	gi|118575698|ref|YP_875441.1|	-	0.0041	15.4	0.1	1.4	7.1	0.0	3.0	2	1	0	2	2	2	1	Putative	glycosyl	hydrolase	of	unknown	function	(DUF1680)
Pec_lyase	PF09492.5	gi|118575698|ref|YP_875441.1|	-	0.11	11.6	0.0	6.3	5.8	0.0	2.2	2	0	0	2	2	2	0	Pectic	acid	lyase
DUF456	PF04306.8	gi|118575699|ref|YP_875442.1|	-	0.019	14.9	1.5	0.021	14.8	0.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF456)
YfhO	PF09586.5	gi|118575699|ref|YP_875442.1|	-	0.12	10.3	3.3	0.14	10.1	2.3	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
AsnC_trans_reg	PF01037.16	gi|118575700|ref|YP_875443.1|	-	1.8e-06	27.5	0.0	2.5e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|118575700|ref|YP_875443.1|	-	0.042	13.5	0.0	0.061	13.0	0.0	1.3	1	0	0	1	1	1	0	GYD	domain
Trans_reg_C	PF00486.23	gi|118575701|ref|YP_875444.1|	-	0.075	12.9	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulatory	protein,	C	terminal
SGL	PF08450.7	gi|118575702|ref|YP_875445.1|	-	2.8e-68	229.9	26.7	0.0013	18.2	0.0	35.4	21	10	7	35	35	35	16	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118575702|ref|YP_875445.1|	-	8.7e-64	215.7	22.0	0.00062	18.9	0.0	27.2	19	7	4	27	27	27	13	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118575702|ref|YP_875445.1|	-	3e-32	110.4	0.0	1.7	8.6	0.0	24.9	29	0	0	29	29	25	2	Arylesterase
Str_synth	PF03088.11	gi|118575702|ref|YP_875445.1|	-	1.6e-16	60.0	0.0	19	5.3	0.0	20.5	26	0	0	26	26	20	0	Strictosidine	synthase
WD40	PF00400.27	gi|118575702|ref|YP_875445.1|	-	2.9e-05	23.7	13.3	79	3.3	0.0	16.3	21	0	0	21	21	12	0	WD	domain,	G-beta	repeat
Glu_cyclase_2	PF05096.7	gi|118575702|ref|YP_875445.1|	-	6.1e-05	22.1	1.4	39	3.1	0.0	9.5	12	0	0	12	12	10	0	Glutamine	cyclotransferase
NHL	PF01436.16	gi|118575702|ref|YP_875445.1|	-	0.0059	16.5	43.4	41	4.3	0.0	23.2	33	0	0	33	33	29	0	NHL	repeat
DPPIV_N	PF00930.16	gi|118575702|ref|YP_875445.1|	-	0.017	13.7	0.0	2.8	6.4	0.0	4.4	5	0	0	5	5	5	0	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
DUF839	PF05787.8	gi|118575702|ref|YP_875445.1|	-	0.05	12.5	0.8	3.1	6.6	0.0	4.4	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF839)
TFIIIC_delta	PF12657.2	gi|118575702|ref|YP_875445.1|	-	0.25	11.0	0.0	8.2e+02	-0.5	0.0	6.6	6	0	0	6	6	6	0	Transcription	factor	IIIC	subunit	delta	N-term
Haemocyan_bet_s	PF14830.1	gi|118575702|ref|YP_875445.1|	-	0.59	9.8	0.0	44	3.8	0.0	3.7	3	0	0	3	3	3	0	Haemocyanin	beta-sandwich
DUF2874	PF11396.3	gi|118575702|ref|YP_875445.1|	-	1.1	9.2	0.0	7.4	6.6	0.0	2.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2874)
BBS2_Mid	PF14783.1	gi|118575702|ref|YP_875445.1|	-	2.5	7.9	0.0	4.5e+02	0.6	0.0	4.2	6	0	0	6	6	5	0	Ciliary	BBSome	complex	subunit	2,	middle	region
2-oxoacid_dh	PF00198.18	gi|118575702|ref|YP_875445.1|	-	2.9	7.0	0.1	7.2	5.8	0.1	1.6	1	1	0	1	1	1	0	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Cytochrom_D1	PF02239.11	gi|118575702|ref|YP_875445.1|	-	3	6.0	0.0	36	2.4	0.0	3.0	2	0	0	2	2	2	0	Cytochrome	D1	heme	domain
DUF3121	PF11319.3	gi|118575702|ref|YP_875445.1|	-	3	7.3	0.0	37	3.7	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3121)
DUF3484	PF11983.3	gi|118575702|ref|YP_875445.1|	-	3.4	8.5	0.0	8.7	7.2	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3484)
Phage_connector	PF05352.7	gi|118575702|ref|YP_875445.1|	-	3.5	6.7	0.3	3e+02	0.4	0.0	4.2	5	0	0	5	5	4	0	Phage	Connector	(GP10)
ThaI	PF15514.1	gi|118575702|ref|YP_875445.1|	-	5.2	6.3	0.0	7.3e+02	-0.8	0.0	4.3	8	0	0	8	8	4	0	Restriction	endonuclease	ThaI
SBP56	PF05694.6	gi|118575702|ref|YP_875445.1|	-	5.5	5.3	1.0	6.6e+02	-1.5	0.0	4.5	7	0	0	7	7	7	0	56kDa	selenium	binding	protein	(SBP56)
TF_Zn_Ribbon	PF08271.7	gi|118575702|ref|YP_875445.1|	-	6.5	6.1	0.1	14	5.1	0.1	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
PAX	PF00292.13	gi|118575702|ref|YP_875445.1|	-	7.5	6.2	6.8	1.6e+02	1.9	0.1	4.1	1	1	3	4	4	4	0	'Paired	box'	domain
Phage_stabilise	PF11134.3	gi|118575702|ref|YP_875445.1|	-	8.4	4.8	2.6	33	2.8	0.0	3.0	3	0	0	3	3	3	0	Phage	stabilisation	protein
ABC_tran_2	PF12848.2	gi|118575703|ref|YP_875446.1|	-	0.083	12.7	3.9	0.25	11.2	2.7	1.7	1	1	1	2	2	2	0	ABC	transporter
ADH_N	PF08240.7	gi|118575704|ref|YP_875447.1|	-	1.1e-30	105.5	0.4	2.1e-30	104.7	0.3	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|118575704|ref|YP_875447.1|	-	4e-14	52.2	3.2	3.5e-13	49.2	2.2	2.3	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|118575704|ref|YP_875447.1|	-	3.7e-05	24.6	0.2	0.0001	23.1	0.1	1.7	2	1	0	2	2	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|118575704|ref|YP_875447.1|	-	0.0021	17.6	0.9	0.0034	16.9	0.6	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|118575704|ref|YP_875447.1|	-	0.0026	16.9	0.2	0.0044	16.1	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|118575704|ref|YP_875447.1|	-	0.0071	16.6	0.1	0.014	15.7	0.0	1.4	1	1	0	1	1	1	1	XdhC	Rossmann	domain
GFO_IDH_MocA	PF01408.17	gi|118575704|ref|YP_875447.1|	-	0.014	15.9	0.5	0.068	13.6	0.2	2.0	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CoA_binding	PF02629.14	gi|118575704|ref|YP_875447.1|	-	0.015	15.7	2.3	0.11	12.9	1.6	2.4	1	1	1	2	2	2	0	CoA	binding	domain
CoA_binding_2	PF13380.1	gi|118575704|ref|YP_875447.1|	-	0.039	14.1	0.0	0.086	13.0	0.0	1.5	1	0	0	1	1	1	0	CoA	binding	domain
Peripla_BP_4	PF13407.1	gi|118575704|ref|YP_875447.1|	-	0.044	13.1	0.1	0.072	12.4	0.0	1.5	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
DUF4350	PF14258.1	gi|118575704|ref|YP_875447.1|	-	0.053	13.7	0.0	0.1	12.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4350)
ApbA	PF02558.11	gi|118575704|ref|YP_875447.1|	-	0.055	12.9	0.3	0.096	12.1	0.2	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.1	gi|118575704|ref|YP_875447.1|	-	0.081	12.9	1.2	0.15	12.0	0.8	1.6	1	1	0	1	1	1	0	NADH(P)-binding
Methyltransf_11	PF08241.7	gi|118575704|ref|YP_875447.1|	-	0.1	13.0	0.0	6.4	7.3	0.0	2.9	3	0	0	3	3	3	0	Methyltransferase	domain
HalX	PF08663.5	gi|118575705|ref|YP_875448.1|	-	0.056	13.4	0.2	0.15	12.0	0.1	1.7	1	1	0	1	1	1	0	HalX	domain
Cep57_MT_bd	PF06657.8	gi|118575705|ref|YP_875448.1|	-	0.11	12.3	0.9	0.25	11.3	0.3	1.7	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
2TM	PF13239.1	gi|118575708|ref|YP_875451.1|	-	0.72	9.9	0.1	0.72	9.9	0.0	2.4	3	0	0	3	3	3	0	2TM	domain
DUF4149	PF13664.1	gi|118575708|ref|YP_875451.1|	-	4.9	7.2	15.2	4.1	7.5	0.0	3.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4149)
TruD	PF01142.13	gi|118575709|ref|YP_875452.1|	-	2.3e-58	197.6	0.0	3.4e-58	197.1	0.0	1.3	1	1	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
SGL	PF08450.7	gi|118575710|ref|YP_875453.1|	-	6.4e-11	42.1	3.3	0.0002	20.8	0.0	5.1	3	2	2	5	5	5	3	SMP-30/Gluconolaconase/LRE-like	region
NHL	PF01436.16	gi|118575710|ref|YP_875453.1|	-	0.00011	21.9	0.0	0.034	14.1	0.0	3.1	2	0	0	2	2	2	1	NHL	repeat
Reg_prop	PF07494.6	gi|118575710|ref|YP_875453.1|	-	0.0008	19.1	3.0	1.1	9.4	0.0	4.4	4	0	0	4	4	4	2	Two	component	regulator	propeller
PA14	PF07691.7	gi|118575710|ref|YP_875453.1|	-	0.056	13.0	0.1	7.7	6.1	0.0	2.5	2	0	0	2	2	2	0	PA14	domain
N6_N4_Mtase	PF01555.13	gi|118575712|ref|YP_875455.1|	-	2.6e-41	141.6	0.0	3e-41	141.4	0.0	1.0	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118575712|ref|YP_875455.1|	-	1.6e-17	63.5	0.1	1e-07	31.9	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118575712|ref|YP_875455.1|	-	1.3e-07	31.3	0.0	1.1e-05	25.0	0.0	2.2	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|118575712|ref|YP_875455.1|	-	1.8e-06	28.3	0.0	0.1	13.0	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575712|ref|YP_875455.1|	-	1.1e-05	25.0	0.0	0.0027	17.3	0.0	2.3	2	0	0	2	2	2	2	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575712|ref|YP_875455.1|	-	1.3e-05	25.7	0.0	0.0084	16.6	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
CMAS	PF02353.15	gi|118575712|ref|YP_875455.1|	-	0.00053	19.1	0.0	0.0012	18.0	0.0	1.5	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_12	PF08242.7	gi|118575712|ref|YP_875455.1|	-	0.00057	20.3	0.0	0.043	14.2	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118575712|ref|YP_875455.1|	-	0.00092	18.9	0.0	0.0076	15.9	0.0	2.3	2	1	1	3	3	3	1	Methyltransferase	domain
TPMT	PF05724.6	gi|118575712|ref|YP_875455.1|	-	0.01	15.3	0.0	0.018	14.4	0.0	1.4	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
Methyltransf_25	PF13649.1	gi|118575712|ref|YP_875455.1|	-	0.017	15.4	0.0	0.088	13.1	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|118575712|ref|YP_875455.1|	-	0.048	13.2	0.0	0.85	9.1	0.0	2.3	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
PTH2	PF01981.11	gi|118575713|ref|YP_875456.1|	-	3.1e-40	136.4	0.0	3.6e-40	136.2	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Lycopene_cycl	PF05834.7	gi|118575714|ref|YP_875457.1|	-	1e-06	27.9	1.1	0.025	13.5	0.0	2.4	2	1	0	2	2	2	2	Lycopene	cyclase	protein
FAD_oxidored	PF12831.2	gi|118575714|ref|YP_875457.1|	-	5.9e-05	22.3	2.3	5.9e-05	22.3	1.6	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|118575714|ref|YP_875457.1|	-	9.4e-05	22.3	0.3	0.00097	19.0	0.1	2.1	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|118575714|ref|YP_875457.1|	-	0.00012	21.0	8.9	0.001	18.0	1.3	2.3	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|118575714|ref|YP_875457.1|	-	0.0005	19.0	1.3	0.0011	17.9	0.9	1.5	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|118575714|ref|YP_875457.1|	-	0.00066	18.2	0.1	0.00098	17.6	0.1	1.2	1	0	0	1	1	1	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|118575714|ref|YP_875457.1|	-	0.001	19.0	1.0	0.0035	17.3	0.7	2.0	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|118575714|ref|YP_875457.1|	-	0.0039	16.3	0.2	0.0071	15.4	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|118575714|ref|YP_875457.1|	-	0.061	12.3	3.2	0.34	9.9	0.9	2.7	2	1	0	2	2	2	0	FAD	binding	domain
GIDA	PF01134.17	gi|118575714|ref|YP_875457.1|	-	0.064	12.1	1.9	0.1	11.4	1.3	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
UbiA	PF01040.13	gi|118575715|ref|YP_875458.1|	-	1.2e-31	109.9	22.3	1.4e-31	109.6	15.4	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
GHMP_kinases_N	PF00288.21	gi|118575715|ref|YP_875458.1|	-	0.036	14.1	1.7	15	5.7	0.0	3.3	3	0	0	3	3	3	0	GHMP	kinases	N	terminal	domain
DUF3341	PF11821.3	gi|118575715|ref|YP_875458.1|	-	1.1	8.6	4.9	0.42	10.0	1.5	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3341)
AAA	PF00004.24	gi|118575717|ref|YP_875460.1|	-	4.6e-88	292.1	0.0	1.6e-47	160.9	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|118575717|ref|YP_875460.1|	-	2.5e-25	88.2	1.4	9.1e-25	86.4	1.0	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|118575717|ref|YP_875460.1|	-	8.7e-15	54.4	0.0	9.2e-09	34.6	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|118575717|ref|YP_875460.1|	-	1.2e-13	51.3	0.1	0.0014	18.7	0.0	4.5	2	2	1	3	3	3	2	AAA	domain
AAA_14	PF13173.1	gi|118575717|ref|YP_875460.1|	-	1.5e-12	47.5	0.0	1.6e-06	28.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|118575717|ref|YP_875460.1|	-	2.1e-12	47.3	0.0	4.8e-05	23.4	0.0	3.3	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_2	PF07724.9	gi|118575717|ref|YP_875460.1|	-	2.3e-12	47.1	0.0	2.2e-07	30.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_17	PF13207.1	gi|118575717|ref|YP_875460.1|	-	2.7e-12	47.5	0.0	1.6e-05	25.6	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|118575717|ref|YP_875460.1|	-	1.3e-10	41.3	0.0	0.00041	20.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|118575717|ref|YP_875460.1|	-	2.5e-10	40.2	0.1	0.00039	20.1	0.0	4.1	3	1	0	3	3	2	2	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.17	gi|118575717|ref|YP_875460.1|	-	4.8e-09	36.3	0.0	0.0011	19.1	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
AAA_25	PF13481.1	gi|118575717|ref|YP_875460.1|	-	4.9e-09	35.8	3.4	0.031	13.6	0.0	4.5	2	2	1	4	4	4	3	AAA	domain
Arch_ATPase	PF01637.13	gi|118575717|ref|YP_875460.1|	-	7.8e-09	35.5	0.0	0.0017	18.1	0.0	3.7	2	1	1	3	3	3	2	Archaeal	ATPase
AAA_18	PF13238.1	gi|118575717|ref|YP_875460.1|	-	1e-08	35.5	0.1	0.0021	18.3	0.0	3.0	3	0	0	3	3	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|118575717|ref|YP_875460.1|	-	2.6e-08	34.0	0.0	0.0065	16.5	0.0	2.8	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|118575717|ref|YP_875460.1|	-	2.9e-08	33.8	0.0	0.0087	16.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
CDC48_2	PF02933.12	gi|118575717|ref|YP_875460.1|	-	4.8e-08	32.5	0.1	1.5e-07	30.8	0.0	1.9	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
Zeta_toxin	PF06414.7	gi|118575717|ref|YP_875460.1|	-	1.6e-07	30.6	0.1	0.011	14.8	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|118575717|ref|YP_875460.1|	-	1.7e-07	30.8	0.0	0.016	14.6	0.0	2.7	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|118575717|ref|YP_875460.1|	-	3.4e-07	29.6	0.6	0.015	14.4	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
ABC_tran	PF00005.22	gi|118575717|ref|YP_875460.1|	-	1.2e-06	28.9	0.0	0.025	14.8	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
AAA_19	PF13245.1	gi|118575717|ref|YP_875460.1|	-	2.2e-06	27.2	0.3	0.097	12.4	0.0	3.1	2	0	0	2	2	2	2	Part	of	AAA	domain
Rad17	PF03215.10	gi|118575717|ref|YP_875460.1|	-	3.3e-06	26.0	0.0	0.047	12.3	0.0	2.3	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
TIP49	PF06068.8	gi|118575717|ref|YP_875460.1|	-	1.2e-05	24.2	0.0	0.041	12.6	0.0	2.6	3	0	0	3	3	2	2	TIP49	C-terminus
AAA_24	PF13479.1	gi|118575717|ref|YP_875460.1|	-	1.7e-05	24.5	0.1	0.15	11.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.13	gi|118575717|ref|YP_875460.1|	-	2.1e-05	24.1	0.0	0.013	15.0	0.0	2.5	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.7	gi|118575717|ref|YP_875460.1|	-	2.6e-05	23.9	0.1	0.61	9.7	0.0	3.7	4	0	0	4	4	3	2	NACHT	domain
ATP-synt_ab	PF00006.20	gi|118575717|ref|YP_875460.1|	-	6.9e-05	22.4	0.0	0.12	11.9	0.0	2.5	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Sigma54_activat	PF00158.21	gi|118575717|ref|YP_875460.1|	-	0.0001	21.8	0.0	0.55	9.6	0.0	3.1	2	1	0	2	2	2	2	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|118575717|ref|YP_875460.1|	-	0.00016	20.8	0.1	0.49	9.4	0.0	3.2	2	1	1	3	3	3	2	KaiC
PhoH	PF02562.11	gi|118575717|ref|YP_875460.1|	-	0.00067	18.9	0.2	2	7.6	0.0	3.5	4	0	0	4	4	4	1	PhoH-like	protein
AAA_3	PF07726.6	gi|118575717|ref|YP_875460.1|	-	0.0014	18.2	0.0	2.1	7.9	0.0	3.2	3	1	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|118575717|ref|YP_875460.1|	-	0.0023	16.9	0.0	1.3	7.9	0.0	2.5	2	1	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_11	PF13086.1	gi|118575717|ref|YP_875460.1|	-	0.003	17.1	0.0	1.1	8.7	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
SKI	PF01202.17	gi|118575717|ref|YP_875460.1|	-	0.0035	17.2	0.1	3.6	7.4	0.0	2.9	3	0	0	3	3	3	0	Shikimate	kinase
ResIII	PF04851.10	gi|118575717|ref|YP_875460.1|	-	0.0052	16.6	0.0	0.56	10.0	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Cytidylate_kin2	PF13189.1	gi|118575717|ref|YP_875460.1|	-	0.0062	16.4	0.0	1	9.2	0.0	2.5	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
Parvo_NS1	PF01057.12	gi|118575717|ref|YP_875460.1|	-	0.009	14.9	0.0	2.7	6.7	0.0	2.2	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
KTI12	PF08433.5	gi|118575717|ref|YP_875460.1|	-	0.017	14.3	0.0	6.8	5.8	0.0	2.8	3	0	0	3	3	3	0	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|118575717|ref|YP_875460.1|	-	0.024	14.3	0.6	13	5.4	0.0	4.1	3	2	1	4	4	4	0	NTPase
AAA_10	PF12846.2	gi|118575717|ref|YP_875460.1|	-	0.031	13.7	0.1	5.8	6.2	0.0	3.1	2	2	1	3	3	3	0	AAA-like	domain
NB-ARC	PF00931.17	gi|118575717|ref|YP_875460.1|	-	0.036	12.9	0.1	3.4	6.4	0.0	2.2	2	0	0	2	2	2	0	NB-ARC	domain
AAA_23	PF13476.1	gi|118575717|ref|YP_875460.1|	-	0.044	14.0	0.0	2.9	8.1	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
SRPRB	PF09439.5	gi|118575717|ref|YP_875460.1|	-	0.055	12.6	0.0	1.3	8.1	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
UPF0079	PF02367.12	gi|118575717|ref|YP_875460.1|	-	0.059	12.9	0.0	6.2	6.4	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
IPT	PF01745.11	gi|118575717|ref|YP_875460.1|	-	0.076	12.1	0.0	0.85	8.7	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
tRNA_lig_kinase	PF08303.6	gi|118575717|ref|YP_875460.1|	-	0.16	11.8	0.0	18	5.1	0.0	2.5	3	0	0	3	3	2	0	tRNA	ligase	kinase	domain
KAP_NTPase	PF07693.9	gi|118575717|ref|YP_875460.1|	-	0.16	10.8	0.1	6.7	5.6	0.0	2.7	2	2	1	3	3	3	0	KAP	family	P-loop	domain
AAA_13	PF13166.1	gi|118575717|ref|YP_875460.1|	-	0.17	10.2	0.0	5.7	5.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
EF1_GNE	PF00736.14	gi|118575718|ref|YP_875461.1|	-	2.8e-18	65.3	0.0	3.1e-18	65.2	0.0	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
PolC_DP2	PF03833.8	gi|118575719|ref|YP_875462.1|	-	9.9	3.6	9.0	10	3.6	6.2	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Ammonium_transp	PF00909.16	gi|118575720|ref|YP_875463.1|	-	2.3e-110	368.8	31.3	3.8e-110	368.0	21.7	1.3	1	1	0	1	1	1	1	Ammonium	Transporter	Family
Cupredoxin_1	PF13473.1	gi|118575724|ref|YP_875467.1|	-	0.13	12.1	0.0	0.35	10.7	0.0	1.7	2	0	0	2	2	2	0	Cupredoxin-like	domain
EamA	PF00892.15	gi|118575724|ref|YP_875467.1|	-	0.89	9.6	16.4	2.3	8.2	10.9	2.0	2	1	0	2	2	2	0	EamA-like	transporter	family
DUF2069	PF09842.4	gi|118575724|ref|YP_875467.1|	-	1.3	9.0	6.9	2.2	8.2	4.8	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2069)
Prok-JAB	PF14464.1	gi|118575725|ref|YP_875468.1|	-	1.5e-20	72.6	0.0	1.8e-20	72.4	0.0	1.0	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.16	gi|118575725|ref|YP_875468.1|	-	7e-07	28.9	0.0	9.5e-07	28.5	0.0	1.1	1	0	0	1	1	1	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
RadC	PF04002.10	gi|118575725|ref|YP_875468.1|	-	0.011	15.3	0.0	0.019	14.6	0.0	1.4	1	1	0	1	1	1	0	RadC-like	JAB	domain
PALP	PF00291.20	gi|118575726|ref|YP_875469.1|	-	2.1e-42	145.4	0.0	2.9e-42	144.9	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Serpin	PF00079.15	gi|118575731|ref|YP_875474.1|	-	1.3e-93	314.1	0.0	1.5e-93	313.9	0.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
UvrC_HhH_N	PF08459.6	gi|118575737|ref|YP_875480.1|	-	1.2e-43	148.3	0.0	2.4e-43	147.3	0.0	1.5	1	0	0	1	1	1	1	UvrC	Helix-hairpin-helix	N-terminal
GIY-YIG	PF01541.19	gi|118575737|ref|YP_875480.1|	-	6.2e-12	45.7	0.4	1.5e-11	44.5	0.3	1.7	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
UVR	PF02151.14	gi|118575737|ref|YP_875480.1|	-	1.8e-09	36.7	0.9	6.9e-09	34.9	0.3	2.2	2	0	0	2	2	2	1	UvrB/uvrC	motif
ABC_tran	PF00005.22	gi|118575738|ref|YP_875481.1|	-	6.3e-21	75.1	0.2	0.0011	19.3	0.0	4.4	4	0	0	4	4	4	4	ABC	transporter
SMC_N	PF02463.14	gi|118575738|ref|YP_875481.1|	-	9.8e-10	38.0	0.0	0.02	14.1	0.0	4.1	4	0	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|118575738|ref|YP_875481.1|	-	6.3e-08	32.9	5.6	0.0037	17.2	0.0	3.8	4	0	0	4	4	4	2	AAA	domain
AAA_29	PF13555.1	gi|118575738|ref|YP_875481.1|	-	1.1e-07	31.2	0.1	0.014	14.9	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|118575738|ref|YP_875481.1|	-	1.2e-07	31.9	1.7	0.0013	18.8	0.1	3.4	4	0	0	4	4	3	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|118575738|ref|YP_875481.1|	-	1.5e-06	28.3	0.2	0.043	13.9	0.0	3.4	3	0	0	3	3	2	2	AAA	domain
AAA_17	PF13207.1	gi|118575738|ref|YP_875481.1|	-	2.5e-06	28.2	4.2	0.082	13.7	0.0	3.8	5	0	0	5	5	2	2	AAA	domain
AAA_25	PF13481.1	gi|118575738|ref|YP_875481.1|	-	6.8e-06	25.6	0.2	0.1	11.9	0.0	3.5	4	0	0	4	4	4	2	AAA	domain
AAA_10	PF12846.2	gi|118575738|ref|YP_875481.1|	-	8.5e-06	25.4	0.1	0.018	14.4	0.0	2.4	2	0	0	2	2	2	2	AAA-like	domain
DUF258	PF03193.11	gi|118575738|ref|YP_875481.1|	-	1.8e-05	23.9	0.4	0.063	12.4	0.2	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|118575738|ref|YP_875481.1|	-	1.9e-05	24.9	0.2	0.15	12.4	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|118575738|ref|YP_875481.1|	-	2.8e-05	24.0	0.1	0.21	11.4	0.0	2.7	3	0	0	3	3	2	2	AAA	domain
AAA_14	PF13173.1	gi|118575738|ref|YP_875481.1|	-	3.7e-05	23.6	0.2	0.19	11.6	0.0	3.2	4	0	0	4	4	3	2	AAA	domain
AAA_23	PF13476.1	gi|118575738|ref|YP_875481.1|	-	0.0001	22.7	0.0	0.022	15.0	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|118575738|ref|YP_875481.1|	-	0.00016	21.4	0.0	0.073	12.7	0.0	2.5	2	0	0	2	2	2	1	NACHT	domain
APS_kinase	PF01583.15	gi|118575738|ref|YP_875481.1|	-	0.00025	20.7	0.1	0.67	9.6	0.0	2.5	2	0	0	2	2	2	2	Adenylylsulphate	kinase
KaiC	PF06745.8	gi|118575738|ref|YP_875481.1|	-	0.00029	20.0	0.0	0.52	9.3	0.0	2.5	2	0	0	2	2	2	2	KaiC
AAA_19	PF13245.1	gi|118575738|ref|YP_875481.1|	-	0.00079	19.1	0.0	1.3	8.8	0.0	2.7	2	0	0	2	2	2	1	Part	of	AAA	domain
MobB	PF03205.9	gi|118575738|ref|YP_875481.1|	-	0.00094	18.8	0.1	0.15	11.7	0.0	2.6	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|118575738|ref|YP_875481.1|	-	0.0019	17.6	0.4	0.33	10.3	0.1	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.13	gi|118575738|ref|YP_875481.1|	-	0.002	17.7	0.1	0.17	11.4	0.0	2.5	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
FtsK_SpoIIIE	PF01580.13	gi|118575738|ref|YP_875481.1|	-	0.0026	17.2	0.2	1.6	8.1	0.0	2.5	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
NB-ARC	PF00931.17	gi|118575738|ref|YP_875481.1|	-	0.0026	16.6	0.0	1.5	7.5	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
T2SE	PF00437.15	gi|118575738|ref|YP_875481.1|	-	0.004	16.1	0.0	1.9	7.3	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ArgK	PF03308.11	gi|118575738|ref|YP_875481.1|	-	0.0046	15.7	0.6	0.25	10.0	0.1	3.0	3	1	1	4	4	4	1	ArgK	protein
DnaJ_CXXCXGXG	PF00684.14	gi|118575738|ref|YP_875481.1|	-	0.0055	16.7	15.3	0.0077	16.2	0.7	4.2	4	1	1	5	5	4	1	DnaJ	central	domain
NTPase_1	PF03266.10	gi|118575738|ref|YP_875481.1|	-	0.009	15.7	0.1	0.57	9.8	0.0	2.7	2	0	0	2	2	2	1	NTPase
Arch_ATPase	PF01637.13	gi|118575738|ref|YP_875481.1|	-	0.011	15.5	0.1	3.9	7.1	0.0	2.4	2	0	0	2	2	2	0	Archaeal	ATPase
DUF2075	PF09848.4	gi|118575738|ref|YP_875481.1|	-	0.011	14.7	0.1	3.8	6.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|118575738|ref|YP_875481.1|	-	0.013	15.6	0.1	2.3	8.4	0.0	2.5	2	0	0	2	2	2	0	RNA	helicase
MMR_HSR1	PF01926.18	gi|118575738|ref|YP_875481.1|	-	0.017	15.0	3.5	0.56	10.1	0.0	3.4	4	1	0	4	4	3	0	50S	ribosome-binding	GTPase
PRK	PF00485.13	gi|118575738|ref|YP_875481.1|	-	0.023	14.2	0.3	0.82	9.1	0.0	2.4	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
RNA12	PF10443.4	gi|118575738|ref|YP_875481.1|	-	0.037	12.5	0.1	4.2	5.7	0.0	2.1	2	0	0	2	2	2	0	RNA12	protein
SbcCD_C	PF13558.1	gi|118575738|ref|YP_875481.1|	-	0.045	13.6	1.4	16	5.5	0.0	3.8	4	2	0	4	4	3	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_28	PF13521.1	gi|118575738|ref|YP_875481.1|	-	0.066	13.1	0.0	11	5.9	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|118575738|ref|YP_875481.1|	-	0.078	13.4	0.4	14	6.2	0.0	2.8	3	0	0	3	3	2	0	Miro-like	protein
AAA_15	PF13175.1	gi|118575738|ref|YP_875481.1|	-	0.13	11.3	0.0	3.3	6.6	0.0	2.9	4	0	0	4	4	4	0	AAA	ATPase	domain
Septin	PF00735.13	gi|118575738|ref|YP_875481.1|	-	0.23	10.4	0.0	0.99	8.3	0.0	1.9	2	0	0	2	2	2	0	Septin
zinc_ribbon_2	PF13240.1	gi|118575738|ref|YP_875481.1|	-	1	8.9	6.1	11	5.5	0.0	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
UvrB	PF12344.3	gi|118575739|ref|YP_875482.1|	-	4.8e-21	74.0	1.8	1.2e-20	72.7	1.3	1.7	1	0	0	1	1	1	1	Ultra-violet	resistance	protein	B
Helicase_C	PF00271.26	gi|118575739|ref|YP_875482.1|	-	1.7e-15	56.6	0.1	5.1e-15	55.1	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|118575739|ref|YP_875482.1|	-	2.1e-09	37.4	0.0	1.2e-08	35.0	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UVR	PF02151.14	gi|118575739|ref|YP_875482.1|	-	1.1e-07	31.1	1.7	3.9e-07	29.3	1.2	2.1	1	0	0	1	1	1	1	UvrB/uvrC	motif
DEAD	PF00270.24	gi|118575739|ref|YP_875482.1|	-	2.6e-07	30.2	0.1	0.00027	20.4	0.1	3.4	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
AAA_19	PF13245.1	gi|118575739|ref|YP_875482.1|	-	0.00066	19.3	4.4	0.0018	18.0	0.1	3.2	4	0	0	4	4	4	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|118575739|ref|YP_875482.1|	-	0.086	12.4	0.4	0.37	10.3	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
N6_N4_Mtase	PF01555.13	gi|118575740|ref|YP_875483.1|	-	4.3e-41	140.9	0.0	7.1e-41	140.1	0.0	1.3	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118575740|ref|YP_875483.1|	-	8.5e-16	58.0	0.1	1.4e-06	28.3	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118575740|ref|YP_875483.1|	-	0.00017	21.2	0.0	0.15	11.6	0.0	2.3	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|118575740|ref|YP_875483.1|	-	0.0025	18.2	0.1	14	6.2	0.0	4.1	4	1	0	4	4	4	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118575740|ref|YP_875483.1|	-	0.064	12.6	0.0	6.2	6.1	0.0	2.6	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
tRNA_int_end_N2	PF12928.2	gi|118575740|ref|YP_875483.1|	-	0.099	12.1	0.0	0.21	11.0	0.0	1.5	1	0	0	1	1	1	0	tRNA-splicing	endonuclease	subunit	sen54	N-term
Pyridox_ox_2	PF12900.2	gi|118575741|ref|YP_875484.1|	-	4.1e-27	94.7	0.0	5.8e-27	94.2	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_oxidase	PF01243.15	gi|118575741|ref|YP_875484.1|	-	8.2e-15	54.5	0.0	1.6e-14	53.6	0.0	1.5	1	1	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
FMN_bind_2	PF04299.7	gi|118575741|ref|YP_875484.1|	-	0.032	13.7	0.0	0.056	12.9	0.0	1.5	1	1	0	1	1	1	0	Putative	FMN-binding	domain
Bac_luciferase	PF00296.15	gi|118575742|ref|YP_875485.1|	-	2e-53	181.5	0.0	2.5e-53	181.2	0.0	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Fe-ADH	PF00465.14	gi|118575743|ref|YP_875486.1|	-	1.1e-48	165.7	0.0	3e-48	164.2	0.0	1.6	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|118575743|ref|YP_875486.1|	-	2.1e-16	60.0	0.0	2.6e-16	59.7	0.0	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|118575743|ref|YP_875486.1|	-	0.0005	19.0	0.0	0.025	13.4	0.0	2.2	2	0	0	2	2	2	2	3-dehydroquinate	synthase
Ribosomal_S30	PF04758.9	gi|118575744|ref|YP_875487.1|	-	3.9e-09	36.1	6.7	5.5e-09	35.6	4.7	1.4	1	1	0	1	1	1	1	Ribosomal	protein	S30
Radical_SAM	PF04055.16	gi|118575748|ref|YP_875491.1|	-	2.5e-08	34.2	0.0	8.7e-08	32.5	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
NAD_binding_1	PF00175.16	gi|118575749|ref|YP_875492.1|	-	2.9e-15	56.7	0.0	4.8e-15	56.0	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|118575749|ref|YP_875492.1|	-	8.1e-11	41.2	8.6	1.4e-10	40.4	5.9	1.4	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.19	gi|118575749|ref|YP_875492.1|	-	0.00052	20.0	0.0	0.0009	19.3	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
GMC_oxred_N	PF00732.14	gi|118575749|ref|YP_875492.1|	-	0.059	12.5	1.1	0.81	8.7	0.1	2.3	2	1	0	2	2	2	0	GMC	oxidoreductase
DHO_dh	PF01180.16	gi|118575750|ref|YP_875493.1|	-	1.1e-47	162.4	0.5	1.4e-47	162.1	0.4	1.2	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|118575750|ref|YP_875493.1|	-	6.1e-08	31.8	1.2	0.00045	19.1	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.16	gi|118575750|ref|YP_875493.1|	-	0.0011	18.2	0.4	0.016	14.4	0.0	2.2	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NMO	PF03060.10	gi|118575750|ref|YP_875493.1|	-	0.0042	16.2	0.1	0.0042	16.2	0.1	2.0	1	1	1	2	2	2	1	Nitronate	monooxygenase
IMPDH	PF00478.20	gi|118575750|ref|YP_875493.1|	-	0.013	14.4	1.0	0.013	14.4	0.7	1.9	1	1	1	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
ThiG	PF05690.9	gi|118575750|ref|YP_875493.1|	-	0.02	13.9	3.2	1.8	7.5	0.4	2.2	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|118575750|ref|YP_875493.1|	-	0.18	11.0	1.8	1.1	8.4	0.0	2.1	2	0	0	2	2	2	0	PcrB	family
Nop	PF01798.13	gi|118575751|ref|YP_875494.1|	-	2.8e-49	166.2	1.0	4.4e-49	165.6	0.7	1.3	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|118575751|ref|YP_875494.1|	-	1.4e-15	56.7	0.0	2.6e-15	55.9	0.0	1.4	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
Fibrillarin	PF01269.12	gi|118575752|ref|YP_875495.1|	-	1.8e-71	239.7	0.0	1.9e-71	239.5	0.0	1.0	1	0	0	1	1	1	1	Fibrillarin
GCD14	PF08704.5	gi|118575752|ref|YP_875495.1|	-	0.014	14.8	0.0	0.018	14.5	0.0	1.1	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
PCMT	PF01135.14	gi|118575752|ref|YP_875495.1|	-	0.023	14.2	0.0	0.029	13.8	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RNase_HII	PF01351.13	gi|118575753|ref|YP_875496.1|	-	7.9e-40	136.6	0.0	9.1e-40	136.4	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
MethyltransfD12	PF02086.10	gi|118575754|ref|YP_875497.1|	-	4.6e-25	88.5	0.0	5.8e-25	88.2	0.0	1.1	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_26	PF13659.1	gi|118575754|ref|YP_875497.1|	-	0.0014	18.6	0.0	0.0035	17.3	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118575754|ref|YP_875497.1|	-	0.0039	16.6	0.0	1.1	8.6	0.0	2.2	2	0	0	2	2	2	2	Conserved	hypothetical	protein	95
TRM	PF02005.11	gi|118575755|ref|YP_875498.1|	-	8.4e-69	232.2	0.0	1.1e-68	231.8	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
MTS	PF05175.9	gi|118575755|ref|YP_875498.1|	-	0.0022	17.3	0.2	0.0035	16.7	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|118575755|ref|YP_875498.1|	-	0.013	15.1	0.0	0.019	14.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575755|ref|YP_875498.1|	-	0.019	15.5	0.1	0.031	14.8	0.1	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118575755|ref|YP_875498.1|	-	0.086	12.8	0.7	0.28	11.2	0.5	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118575755|ref|YP_875498.1|	-	0.14	11.5	0.0	0.19	11.0	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
FtsJ	PF01728.14	gi|118575756|ref|YP_875499.1|	-	4.5e-52	176.6	0.0	5.1e-52	176.4	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.1	gi|118575756|ref|YP_875499.1|	-	1.4e-05	24.8	0.0	3.9e-05	23.4	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118575756|ref|YP_875499.1|	-	0.00012	21.6	0.0	0.00035	20.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118575756|ref|YP_875499.1|	-	0.00056	20.4	0.1	0.0011	19.4	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118575756|ref|YP_875499.1|	-	0.0082	16.4	0.0	0.014	15.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|118575756|ref|YP_875499.1|	-	0.018	15.5	0.1	0.06	13.8	0.1	2.0	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltrans_Mon	PF14314.1	gi|118575756|ref|YP_875499.1|	-	0.063	11.1	0.0	0.075	10.8	0.0	1.1	1	0	0	1	1	1	0	Virus-capping	methyltransferase
Methyltransf_26	PF13659.1	gi|118575756|ref|YP_875499.1|	-	0.077	13.0	0.2	0.14	12.1	0.2	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
RNA_pol_Rpc34	PF05158.7	gi|118575757|ref|YP_875500.1|	-	5.5e-05	22.5	0.3	9.5e-05	21.7	0.2	1.6	1	1	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
COX16	PF14138.1	gi|118575757|ref|YP_875500.1|	-	0.94	9.6	5.2	2.3	8.4	3.6	1.6	1	0	0	1	1	1	0	Cytochrome	c	oxidase	assembly	protein	COX16
FBPase_3	PF01950.11	gi|118575758|ref|YP_875501.1|	-	3.3e-154	513.3	0.0	4.1e-154	512.9	0.0	1.1	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
HYR	PF02494.11	gi|118575759|ref|YP_875502.1|	-	6.1e-89	292.1	70.3	1.3e-08	34.7	0.3	15.6	15	0	0	15	15	15	15	HYR	domain
NHL	PF01436.16	gi|118575759|ref|YP_875502.1|	-	4.6e-43	143.0	2.3	3.1e-09	36.3	0.0	7.4	6	0	0	6	6	6	6	NHL	repeat
Big_3_4	PF13754.1	gi|118575759|ref|YP_875502.1|	-	6.8e-39	131.9	200.1	0.00041	20.6	4.1	17.5	15	3	1	16	16	16	14	Bacterial	Ig-like	domain	(group	3)
SGL	PF08450.7	gi|118575759|ref|YP_875502.1|	-	3.4e-10	39.7	0.8	1.1e-05	25.0	0.3	4.0	1	1	2	3	3	3	2	SMP-30/Gluconolaconase/LRE-like	region
REJ	PF02010.10	gi|118575759|ref|YP_875502.1|	-	3.3e-08	32.2	4.6	5.6	5.1	0.0	9.9	10	2	1	11	11	11	2	REJ	domain
LYTB	PF02401.13	gi|118575759|ref|YP_875502.1|	-	5.9e-05	22.1	8.2	1.2	7.9	0.0	6.0	5	2	1	6	6	6	2	LytB	protein
Big_3_2	PF12245.3	gi|118575759|ref|YP_875502.1|	-	0.0004	19.8	17.4	8.3	6.0	0.0	9.0	9	1	1	10	10	10	2	Bacterial	Ig-like	domain	(group	3)
HemolysinCabind	PF00353.14	gi|118575759|ref|YP_875502.1|	-	0.47	10.9	57.7	0.12	12.8	1.8	6.7	6	0	0	6	6	6	0	Hemolysin-type	calcium-binding	repeat	(2	copies)
SGL	PF08450.7	gi|118575760|ref|YP_875503.1|	-	2.6e-05	23.7	0.0	2.4	7.4	0.0	4.6	2	2	2	4	4	4	3	SMP-30/Gluconolaconase/LRE-like	region
NHL	PF01436.16	gi|118575760|ref|YP_875503.1|	-	0.0008	19.2	9.6	0.16	11.9	0.0	6.3	7	0	0	7	7	7	2	NHL	repeat
Lactonase	PF10282.4	gi|118575760|ref|YP_875503.1|	-	0.00096	18.3	0.0	0.32	10.0	0.0	3.2	2	1	1	3	3	3	2	Lactonase,	7-bladed	beta-propeller
MT-A70	PF05063.9	gi|118575763|ref|YP_875506.1|	-	2e-31	108.8	0.1	2.8e-31	108.4	0.1	1.2	1	0	0	1	1	1	1	MT-A70
Cons_hypoth95	PF03602.10	gi|118575763|ref|YP_875506.1|	-	0.018	14.4	0.1	0.026	13.9	0.1	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
PBP_like_2	PF12849.2	gi|118575764|ref|YP_875507.1|	-	1.2e-50	172.6	1.2	1.5e-50	172.2	0.9	1.1	1	0	0	1	1	1	1	PBP	superfamily	domain
SBP_bac_1	PF01547.20	gi|118575764|ref|YP_875507.1|	-	1.5e-12	47.9	0.0	2.3e-12	47.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
PBP_like	PF12727.2	gi|118575764|ref|YP_875507.1|	-	2.9e-06	26.3	0.0	1.1e-05	24.5	0.0	1.9	1	1	0	1	1	1	1	PBP	superfamily	domain
AsmA_1	PF13109.1	gi|118575765|ref|YP_875508.1|	-	0.014	14.6	0.0	0.23	10.7	0.0	2.1	2	0	0	2	2	2	0	AsmA-like	C-terminal	region
DUF1814	PF08843.6	gi|118575766|ref|YP_875509.1|	-	0.023	14.4	0.6	0.044	13.5	0.4	1.5	1	1	0	1	1	1	0	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
NOB1_Zn_bind	PF08772.6	gi|118575767|ref|YP_875510.1|	-	0.017	14.8	0.1	0.039	13.7	0.0	1.7	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FtsQ	PF03799.10	gi|118575769|ref|YP_875512.1|	-	0.0033	17.5	0.0	0.039	14.1	0.0	2.6	2	1	1	3	3	3	1	Cell	division	protein	FtsQ
BPD_transp_1	PF00528.17	gi|118575770|ref|YP_875513.1|	-	2.3e-15	56.6	15.0	2.3e-15	56.6	10.4	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3464	PF11947.3	gi|118575770|ref|YP_875513.1|	-	9.7	5.6	8.1	0.92	8.9	0.0	3.0	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF3464)
BPD_transp_1	PF00528.17	gi|118575771|ref|YP_875514.1|	-	2.2e-18	66.4	16.7	2.2e-18	66.4	11.6	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|118575772|ref|YP_875515.1|	-	2.7e-29	102.2	0.0	3.6e-29	101.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118575772|ref|YP_875515.1|	-	7.2e-15	55.7	0.0	5.2e-08	33.2	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|118575772|ref|YP_875515.1|	-	1.5e-09	37.4	0.0	3.4e-08	33.0	0.0	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|118575772|ref|YP_875515.1|	-	0.00011	22.3	0.1	0.00049	20.2	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|118575772|ref|YP_875515.1|	-	0.00011	21.4	0.1	0.21	10.6	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|118575772|ref|YP_875515.1|	-	0.00018	21.8	0.0	0.00033	21.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|118575772|ref|YP_875515.1|	-	0.0017	17.5	0.0	0.0029	16.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|118575772|ref|YP_875515.1|	-	0.0021	17.5	0.0	0.004	16.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|118575772|ref|YP_875515.1|	-	0.0022	18.0	0.1	0.012	15.6	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|118575772|ref|YP_875515.1|	-	0.0023	17.4	0.1	0.32	10.3	0.0	2.1	1	1	1	2	2	2	1	AAA-like	domain
Rad17	PF03215.10	gi|118575772|ref|YP_875515.1|	-	0.0095	14.6	0.0	0.013	14.2	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|118575772|ref|YP_875515.1|	-	0.017	15.3	0.2	0.24	11.5	0.0	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|118575772|ref|YP_875515.1|	-	0.02	14.7	0.0	0.031	14.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|118575772|ref|YP_875515.1|	-	0.032	13.9	0.0	0.54	9.9	0.0	2.1	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_17	PF13207.1	gi|118575772|ref|YP_875515.1|	-	0.032	15.0	0.2	0.056	14.2	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|118575772|ref|YP_875515.1|	-	0.053	13.1	0.0	0.11	12.1	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.1	gi|118575772|ref|YP_875515.1|	-	0.058	12.9	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|118575772|ref|YP_875515.1|	-	0.08	12.9	0.1	0.24	11.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|118575772|ref|YP_875515.1|	-	0.088	12.5	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|118575772|ref|YP_875515.1|	-	0.14	11.5	0.0	0.27	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|118575772|ref|YP_875515.1|	-	0.17	11.7	0.2	0.46	10.3	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
Hjc	PF01870.13	gi|118575773|ref|YP_875516.1|	-	1.5e-06	27.7	0.0	2.2e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|118575773|ref|YP_875516.1|	-	0.0066	16.7	0.0	0.0082	16.4	0.0	1.3	1	0	0	1	1	1	1	Nuclease-related	domain
Phytase	PF02333.10	gi|118575773|ref|YP_875516.1|	-	0.13	10.9	0.0	0.17	10.5	0.0	1.1	1	0	0	1	1	1	0	Phytase
Lactonase	PF10282.4	gi|118575775|ref|YP_875518.1|	-	3.3e-15	56.0	0.7	3.2e-07	29.7	0.0	5.6	3	2	2	5	5	5	2	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118575775|ref|YP_875518.1|	-	1.1e-08	34.7	3.9	0.12	11.7	0.0	7.7	4	3	3	8	8	8	2	SMP-30/Gluconolaconase/LRE-like	region
Str_synth	PF03088.11	gi|118575775|ref|YP_875518.1|	-	0.096	12.7	0.0	1.3e+02	2.7	0.0	5.4	7	0	0	7	7	7	0	Strictosidine	synthase
NESP55	PF06390.7	gi|118575775|ref|YP_875518.1|	-	0.51	9.6	2.8	0.79	9.0	1.9	1.2	1	0	0	1	1	1	0	Neuroendocrine-specific	golgi	protein	P55	(NESP55)
Trypan_PARP	PF05887.6	gi|118575775|ref|YP_875518.1|	-	1.6	8.4	20.3	4.8	6.9	14.0	1.7	1	0	0	1	1	1	0	Procyclic	acidic	repetitive	protein	(PARP)
SGL	PF08450.7	gi|118575776|ref|YP_875519.1|	-	7.6e-42	143.3	7.0	0.00011	21.7	0.0	14.9	5	4	2	11	11	11	7	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118575776|ref|YP_875519.1|	-	4.9e-29	101.4	0.1	0.0094	15.0	0.0	11.7	5	3	5	12	12	12	9	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118575776|ref|YP_875519.1|	-	2.7e-27	94.5	0.0	0.022	14.7	0.0	13.8	14	0	0	14	14	14	6	Arylesterase
Str_synth	PF03088.11	gi|118575776|ref|YP_875519.1|	-	8.1e-12	45.0	0.0	16	5.5	0.0	13.7	16	0	0	16	16	16	0	Strictosidine	synthase
Big_5	PF13205.1	gi|118575776|ref|YP_875519.1|	-	1.1e-08	35.6	21.9	0.013	16.0	0.5	6.7	7	0	0	7	7	6	4	Bacterial	Ig-like	domain
WD40	PF00400.27	gi|118575776|ref|YP_875519.1|	-	7e-06	25.7	0.6	1e+02	2.9	0.0	9.3	11	0	0	11	11	11	0	WD	domain,	G-beta	repeat
NHL	PF01436.16	gi|118575776|ref|YP_875519.1|	-	0.0001	22.0	25.6	8.8	6.5	0.0	14.8	18	1	1	19	19	18	1	NHL	repeat
Glu_cyclase_2	PF05096.7	gi|118575776|ref|YP_875519.1|	-	0.0015	17.6	0.1	17	4.3	0.0	6.2	7	1	1	8	8	8	0	Glutamine	cyclotransferase
PD40	PF07676.7	gi|118575776|ref|YP_875519.1|	-	0.015	14.9	30.8	16	5.2	0.0	13.7	18	0	0	18	18	18	0	WD40-like	Beta	Propeller	Repeat
ROS_MUCR	PF05443.6	gi|118575776|ref|YP_875519.1|	-	0.081	12.7	0.0	49	3.6	0.0	4.7	6	0	0	6	6	6	0	ROS/MUCR	transcriptional	regulator	protein
TFIIIC_delta	PF12657.2	gi|118575776|ref|YP_875519.1|	-	0.39	10.4	0.0	7.4e+02	-0.3	0.0	5.5	7	0	0	7	7	7	0	Transcription	factor	IIIC	subunit	delta	N-term
Trypan_PARP	PF05887.6	gi|118575776|ref|YP_875519.1|	-	1.1	9.0	28.6	2.8	7.7	19.8	1.6	1	0	0	1	1	1	0	Procyclic	acidic	repetitive	protein	(PARP)
ThaI	PF15514.1	gi|118575776|ref|YP_875519.1|	-	3.9	6.7	0.0	5.9e+02	-0.5	0.0	4.0	5	1	1	6	6	6	0	Restriction	endonuclease	ThaI
SGL	PF08450.7	gi|118575777|ref|YP_875520.1|	-	9e-05	21.9	0.1	23	4.2	0.0	4.9	2	2	1	4	4	4	3	SMP-30/Gluconolaconase/LRE-like	region
WD40	PF00400.27	gi|118575777|ref|YP_875520.1|	-	0.17	11.8	2.3	11	6.0	0.0	5.0	7	0	0	7	7	7	0	WD	domain,	G-beta	repeat
Sec5	PF15469.1	gi|118575778|ref|YP_875521.1|	-	0.044	13.5	0.4	0.14	11.8	0.3	1.8	1	1	0	1	1	1	0	Exocyst	complex	component	Sec5
Syntaxin-6_N	PF09177.6	gi|118575778|ref|YP_875521.1|	-	0.062	13.7	0.9	0.13	12.7	0.6	1.6	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF35_N	PF12172.3	gi|118575780|ref|YP_875523.1|	-	0.0023	17.7	6.7	0.0081	16.0	4.7	1.9	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Thiolase_C	PF02803.13	gi|118575781|ref|YP_875524.1|	-	1.4e-09	37.4	2.2	3.4e-09	36.1	1.5	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|118575781|ref|YP_875524.1|	-	2.1e-06	26.9	0.0	3.8e-06	26.0	0.0	1.5	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|118575781|ref|YP_875524.1|	-	1.1e-05	25.1	0.1	3.1e-05	23.5	0.1	1.8	1	0	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|118575781|ref|YP_875524.1|	-	0.0077	15.8	0.0	0.0077	15.8	0.0	2.3	4	0	0	4	4	4	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Bac_luciferase	PF00296.15	gi|118575782|ref|YP_875525.1|	-	2.7e-56	190.9	0.1	3.2e-56	190.7	0.1	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Glyco_trans_4_4	PF13579.1	gi|118575783|ref|YP_875526.1|	-	0.0093	16.1	0.2	0.0093	16.1	0.1	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
bact-PGI_C	PF10432.4	gi|118575784|ref|YP_875527.1|	-	1.6e-38	131.8	0.0	2.2e-38	131.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|118575784|ref|YP_875527.1|	-	1.4e-05	24.7	0.0	3.1e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	SIS	domain
IF-2B	PF01008.12	gi|118575785|ref|YP_875528.1|	-	1.7e-83	279.8	0.0	2e-83	279.6	0.0	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
TPPK_C	PF12555.3	gi|118575786|ref|YP_875529.1|	-	0.19	11.4	2.3	0.49	10.1	1.6	1.7	1	0	0	1	1	1	0	Thiamine	pyrophosphokinase	C	terminal
MT-A70	PF05063.9	gi|118575789|ref|YP_875532.1|	-	5.5e-31	107.4	0.1	7.7e-31	106.9	0.1	1.2	1	0	0	1	1	1	1	MT-A70
Cons_hypoth95	PF03602.10	gi|118575789|ref|YP_875532.1|	-	0.023	14.1	0.1	0.032	13.6	0.1	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
RestrictionMunI	PF11407.3	gi|118575790|ref|YP_875533.1|	-	1.9e-102	341.1	1.3	3.9e-102	340.0	0.9	1.5	1	1	0	1	1	1	1	Type	II	restriction	enzyme	MunI
UDG	PF03167.14	gi|118575792|ref|YP_875535.1|	-	4.4e-36	123.6	0.0	5.8e-36	123.2	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Pur_DNA_glyco	PF02245.11	gi|118575793|ref|YP_875536.1|	-	2.8e-55	186.3	0.1	3.1e-55	186.1	0.0	1.0	1	0	0	1	1	1	1	Methylpurine-DNA	glycosylase	(MPG)
DUF1491	PF07372.7	gi|118575793|ref|YP_875536.1|	-	0.027	14.3	0.0	0.047	13.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1491)
SNARE_assoc	PF09335.6	gi|118575794|ref|YP_875537.1|	-	2.4e-17	63.2	2.7	2.4e-17	63.2	1.9	2.3	2	1	1	3	3	3	1	SNARE	associated	Golgi	protein
RseC_MucC	PF04246.7	gi|118575794|ref|YP_875537.1|	-	7.4	6.1	7.4	5.2	6.6	0.9	2.2	2	0	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
ABC_tran	PF00005.22	gi|118575796|ref|YP_875539.1|	-	4.6e-23	82.0	0.0	6.3e-23	81.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|118575796|ref|YP_875539.1|	-	1.3e-17	63.8	0.1	2.2e-17	63.1	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|118575796|ref|YP_875539.1|	-	3.6e-13	50.1	0.1	2.1e-10	41.0	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|118575796|ref|YP_875539.1|	-	7e-05	22.1	0.0	0.00016	20.9	0.0	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.1	gi|118575796|ref|YP_875539.1|	-	0.01	16.1	0.0	0.18	12.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|118575796|ref|YP_875539.1|	-	0.013	15.4	0.1	0.029	14.3	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|118575796|ref|YP_875539.1|	-	0.026	13.9	0.0	0.7	9.2	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
AAA_15	PF13175.1	gi|118575796|ref|YP_875539.1|	-	0.038	13.0	0.1	0.063	12.3	0.1	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|118575796|ref|YP_875539.1|	-	0.056	12.8	0.1	0.28	10.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|118575796|ref|YP_875539.1|	-	0.079	12.5	0.1	0.15	11.5	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PRK	PF00485.13	gi|118575796|ref|YP_875539.1|	-	0.096	12.2	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_13	PF13166.1	gi|118575796|ref|YP_875539.1|	-	0.26	9.6	0.0	0.42	9.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
N6_N4_Mtase	PF01555.13	gi|118575798|ref|YP_875541.1|	-	3.1e-15	56.2	0.0	1.2e-11	44.5	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|118575798|ref|YP_875541.1|	-	4.6e-09	36.3	0.0	2.6e-08	33.9	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|118575798|ref|YP_875541.1|	-	6e-07	29.2	0.1	0.0086	15.6	0.0	2.7	2	1	1	3	3	3	2	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|118575798|ref|YP_875541.1|	-	0.015	14.4	0.0	0.023	13.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|118575798|ref|YP_875541.1|	-	0.11	11.9	0.0	3.3	7.0	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
Methyltransf_31	PF13847.1	gi|118575798|ref|YP_875541.1|	-	0.16	11.5	0.0	2.3	7.7	0.0	2.3	2	0	0	2	2	2	0	Methyltransferase	domain
Pyridox_oxidase	PF01243.15	gi|118575802|ref|YP_875545.1|	-	7e-20	70.8	0.0	9.5e-20	70.4	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|118575802|ref|YP_875545.1|	-	3.2e-11	43.2	0.0	4.1e-11	42.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
bPH_3	PF14470.1	gi|118575804|ref|YP_875547.1|	-	1.8e-15	56.9	0.0	2.8e-15	56.3	0.0	1.3	1	0	0	1	1	1	1	Bacterial	PH	domain
SHOCT	PF09851.4	gi|118575804|ref|YP_875547.1|	-	5.4e-07	28.8	5.0	1.2e-06	27.7	0.3	2.6	2	0	0	2	2	2	1	Short	C-terminal	domain
GvpG	PF05120.7	gi|118575804|ref|YP_875547.1|	-	0.024	14.4	1.3	0.086	12.6	0.9	2.0	1	1	0	1	1	1	0	Gas	vesicle	protein	G
AAA_assoc	PF14363.1	gi|118575804|ref|YP_875547.1|	-	0.035	14.1	0.2	0.062	13.3	0.1	1.3	1	0	0	1	1	1	0	Domain	associated	at	C-terminal	with	AAA
PRP1_N	PF06424.7	gi|118575804|ref|YP_875547.1|	-	0.047	14.0	0.6	0.047	14.0	0.4	1.6	2	0	0	2	2	2	0	PRP1	splicing	factor,	N-terminal
tRNA-synt_2	PF00152.15	gi|118575805|ref|YP_875548.1|	-	6.3e-83	278.3	0.0	1.1e-82	277.5	0.0	1.4	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|118575805|ref|YP_875548.1|	-	1.1e-13	50.8	0.2	1.3e-12	47.3	0.2	2.2	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
Ehrlichia_rpt	PF09528.5	gi|118575805|ref|YP_875548.1|	-	0.039	12.1	0.0	0.053	11.6	0.0	1.1	1	0	0	1	1	1	0	Ehrlichia	tandem	repeat	(Ehrlichia_rpt)
tRNA-synt_2d	PF01409.15	gi|118575805|ref|YP_875548.1|	-	0.063	12.4	0.2	0.39	9.8	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
Iso_dh	PF00180.15	gi|118575806|ref|YP_875549.1|	-	1.2e-96	323.6	0.0	1.4e-96	323.5	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|118575806|ref|YP_875549.1|	-	0.0031	16.7	0.0	0.0051	16.0	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal	phosphate	biosynthetic	protein	PdxA
HMGL-like	PF00682.14	gi|118575807|ref|YP_875550.1|	-	5.2e-75	252.1	1.4	5.2e-75	252.1	1.0	1.6	2	0	0	2	2	2	1	HMGL-like
LeuA_dimer	PF08502.5	gi|118575807|ref|YP_875550.1|	-	7.7e-26	90.4	0.2	1.3e-25	89.7	0.2	1.4	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
PTE	PF02126.13	gi|118575807|ref|YP_875550.1|	-	0.0054	15.7	0.8	0.18	10.8	0.0	2.6	3	0	0	3	3	3	1	Phosphotriesterase	family
Glyco_hydro_97	PF10566.4	gi|118575807|ref|YP_875550.1|	-	0.011	14.8	0.0	0.017	14.2	0.0	1.2	1	0	0	1	1	1	0	Glycoside	hydrolase	97
Amidohydro_3	PF07969.6	gi|118575807|ref|YP_875550.1|	-	0.044	13.0	0.9	0.22	10.7	0.6	2.2	2	1	0	2	2	2	0	Amidohydrolase	family
DUF442	PF04273.8	gi|118575807|ref|YP_875550.1|	-	0.046	13.5	0.1	4.7	7.1	0.0	2.5	2	0	0	2	2	2	0	Putative	phosphatase	(DUF442)
Radical_SAM	PF04055.16	gi|118575807|ref|YP_875550.1|	-	0.067	13.3	0.1	0.2	11.7	0.1	1.8	1	1	0	1	1	1	0	Radical	SAM	superfamily
ALS_ss_C	PF10369.4	gi|118575808|ref|YP_875551.1|	-	7.1e-25	86.5	0.3	7e-23	80.1	0.0	2.2	2	0	0	2	2	2	2	Small	subunit	of	acetolactate	synthase
ACT_5	PF13710.1	gi|118575808|ref|YP_875551.1|	-	1.9e-15	56.4	0.1	3.6e-15	55.4	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.20	gi|118575808|ref|YP_875551.1|	-	1.5e-13	49.9	0.0	2.7e-13	49.0	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.1	gi|118575808|ref|YP_875551.1|	-	0.0018	18.6	0.1	0.0042	17.3	0.1	1.7	1	1	0	1	1	1	1	ACT	domain
TPP_enzyme_N	PF02776.13	gi|118575809|ref|YP_875552.1|	-	1.4e-57	193.9	0.2	2.6e-56	189.7	0.1	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|118575809|ref|YP_875552.1|	-	1.7e-44	150.9	0.1	3.6e-44	149.8	0.1	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.16	gi|118575809|ref|YP_875552.1|	-	8.8e-44	148.7	0.1	8.8e-44	148.7	0.0	2.1	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
ANF_receptor	PF01094.23	gi|118575810|ref|YP_875553.1|	-	6.8e-26	90.8	0.0	8.4e-26	90.5	0.0	1.1	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_6	PF13458.1	gi|118575810|ref|YP_875553.1|	-	1.9e-25	89.9	0.0	3.8e-25	88.9	0.0	1.5	1	1	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|118575810|ref|YP_875553.1|	-	2.5e-05	23.2	0.0	3.6e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
Dam	PF05869.6	gi|118575811|ref|YP_875554.1|	-	1.4e-15	57.1	0.0	1.7e-15	56.9	0.0	1.0	1	0	0	1	1	1	1	DNA	N-6-adenine-methyltransferase	(Dam)
NAC	PF01849.13	gi|118575814|ref|YP_875557.1|	-	0.059	12.9	0.2	0.13	11.8	0.1	1.6	2	0	0	2	2	2	0	NAC	domain
Big_5	PF13205.1	gi|118575817|ref|YP_875560.1|	-	0.0012	19.4	25.0	0.02	15.4	1.5	5.3	5	0	0	5	5	5	2	Bacterial	Ig-like	domain
NHL	PF01436.16	gi|118575817|ref|YP_875560.1|	-	0.0075	16.1	0.9	0.052	13.5	0.2	2.9	2	0	0	2	2	2	1	NHL	repeat
DeoC	PF01791.4	gi|118575818|ref|YP_875561.1|	-	7.7e-20	71.1	0.0	9.3e-20	70.9	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
ThiG	PF05690.9	gi|118575818|ref|YP_875561.1|	-	0.0031	16.6	0.1	0.0047	16.0	0.1	1.4	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
DUF2376	PF09550.5	gi|118575820|ref|YP_875563.1|	-	0.00014	21.9	6.3	52	4.1	0.0	6.0	6	0	0	6	6	6	3	Conserved	hypothetical	phage	protein	(DUF2376)
ACC_epsilon	PF13822.1	gi|118575820|ref|YP_875563.1|	-	0.68	10.3	18.5	49	4.3	0.1	6.0	6	0	0	6	6	6	0	Acyl-CoA	carboxylase	epsilon	subunit
DDE_Tnp_IS66	PF03050.9	gi|118575821|ref|YP_875564.1|	-	0.11	11.6	0.0	0.12	11.6	0.0	1.1	1	0	0	1	1	1	0	Transposase	IS66	family
MethyltransfD12	PF02086.10	gi|118575822|ref|YP_875565.1|	-	1.5e-30	106.5	0.0	1.9e-30	106.2	0.0	1.0	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
ADH_N	PF08240.7	gi|118575823|ref|YP_875566.1|	-	2.7e-21	75.3	3.2	6.5e-21	74.1	2.2	1.6	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|118575823|ref|YP_875566.1|	-	2.2e-19	69.3	0.2	3.2e-19	68.7	0.2	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|118575823|ref|YP_875566.1|	-	4.7e-05	24.2	0.1	7.9e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|118575823|ref|YP_875566.1|	-	0.038	13.1	3.0	0.082	12.0	0.2	2.1	1	1	1	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|118575823|ref|YP_875566.1|	-	0.081	13.4	0.0	0.14	12.6	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Methyltransf_18	PF12847.2	gi|118575823|ref|YP_875566.1|	-	0.085	13.4	0.0	0.21	12.1	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|118575823|ref|YP_875566.1|	-	0.14	12.6	0.0	0.47	10.9	0.0	1.9	3	0	0	3	3	3	0	Methyltransferase	domain
ATP-synt_F	PF01990.12	gi|118575824|ref|YP_875567.1|	-	1.1e-13	51.3	0.0	1.2e-13	51.2	0.0	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DUF4350	PF14258.1	gi|118575824|ref|YP_875567.1|	-	0.069	13.3	0.3	3.3	7.9	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4350)
Trp_syntA	PF00290.15	gi|118575824|ref|YP_875567.1|	-	0.093	11.2	0.0	0.1	11.1	0.0	1.0	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
Copper-bind	PF00127.15	gi|118575831|ref|YP_875574.1|	-	0.00023	21.3	0.0	0.00076	19.6	0.0	1.9	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Trypan_PARP	PF05887.6	gi|118575831|ref|YP_875574.1|	-	0.066	13.0	18.4	0.79	9.5	8.9	2.3	2	0	0	2	2	2	0	Procyclic	acidic	repetitive	protein	(PARP)
Cupredoxin_1	PF13473.1	gi|118575831|ref|YP_875574.1|	-	0.081	12.8	0.0	0.36	10.7	0.0	2.2	2	0	0	2	2	2	0	Cupredoxin-like	domain
UBX	PF00789.15	gi|118575831|ref|YP_875574.1|	-	0.15	12.1	0.0	45	4.2	0.0	3.0	2	0	0	2	2	2	0	UBX	domain
PLDc_2	PF13091.1	gi|118575832|ref|YP_875575.1|	-	0.0017	18.0	0.0	0.0033	17.1	0.0	1.5	1	0	0	1	1	1	1	PLD-like	domain
HATPase_c_3	PF13589.1	gi|118575833|ref|YP_875576.1|	-	3.5e-26	91.4	0.0	1e-25	89.9	0.0	1.9	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|118575833|ref|YP_875576.1|	-	7.2e-07	28.9	0.0	2.1e-06	27.4	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
ResIII	PF04851.10	gi|118575834|ref|YP_875577.1|	-	3.8e-17	62.7	0.0	1.2e-16	61.1	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|118575834|ref|YP_875577.1|	-	9.2e-14	51.2	0.0	2.8e-13	49.6	0.0	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118575834|ref|YP_875577.1|	-	4.3e-09	36.0	0.0	1.9e-08	34.0	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
AAA_19	PF13245.1	gi|118575834|ref|YP_875577.1|	-	0.0015	18.2	0.1	0.056	13.1	0.0	3.0	3	0	0	3	3	3	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|118575834|ref|YP_875577.1|	-	0.0075	16.4	1.8	0.15	12.2	0.1	3.1	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|118575834|ref|YP_875577.1|	-	0.056	13.4	0.5	0.47	10.4	0.1	2.6	2	1	0	2	2	2	0	AAA	ATPase	domain
Resolvase	PF00239.16	gi|118575834|ref|YP_875577.1|	-	0.064	13.1	1.6	0.11	12.3	0.3	2.0	2	0	0	2	2	2	0	Resolvase,	N	terminal	domain
DEDD_Tnp_IS110	PF01548.12	gi|118575834|ref|YP_875577.1|	-	0.069	12.8	0.1	0.17	11.5	0.1	1.6	1	0	0	1	1	1	0	Transposase
PAPS_reduct	PF01507.14	gi|118575835|ref|YP_875578.1|	-	1.8e-10	40.9	0.0	3.2e-10	40.0	0.0	1.5	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.16	gi|118575835|ref|YP_875578.1|	-	0.0052	16.3	0.0	0.31	10.4	0.0	2.2	2	0	0	2	2	2	2	Asparagine	synthase
DUF262	PF03235.9	gi|118575837|ref|YP_875580.1|	-	9.1e-30	104.2	0.1	9.1e-30	104.2	0.1	3.2	2	1	1	3	3	3	1	Protein	of	unknown	function	DUF262
DUF1524	PF07510.6	gi|118575837|ref|YP_875580.1|	-	2.3e-21	76.1	7.4	2.3e-21	76.1	5.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1524)
Peptidase_S8	PF00082.17	gi|118575838|ref|YP_875581.1|	-	7.2e-25	87.6	0.1	1.6e-24	86.5	0.1	1.5	1	0	0	1	1	1	1	Subtilase	family
Big_5	PF13205.1	gi|118575838|ref|YP_875581.1|	-	5.3e-08	33.4	11.4	0.0033	17.9	0.3	5.3	4	1	0	4	4	4	3	Bacterial	Ig-like	domain
NHL	PF01436.16	gi|118575838|ref|YP_875581.1|	-	0.0074	16.1	3.7	0.055	13.4	0.1	4.1	3	0	0	3	3	3	1	NHL	repeat
TFIIIC_delta	PF12657.2	gi|118575838|ref|YP_875581.1|	-	0.46	10.1	0.0	1.4	8.6	0.0	1.7	2	0	0	2	2	2	0	Transcription	factor	IIIC	subunit	delta	N-term
PD40	PF07676.7	gi|118575841|ref|YP_875584.1|	-	0.0012	18.4	0.8	11	5.7	0.0	4.8	5	0	0	5	5	5	2	WD40-like	Beta	Propeller	Repeat
RIO1	PF01163.17	gi|118575842|ref|YP_875585.1|	-	0.0039	16.5	0.0	0.0057	16.0	0.0	1.1	1	0	0	1	1	1	1	RIO1	family
Pyridox_oxidase	PF01243.15	gi|118575843|ref|YP_875586.1|	-	8.8e-16	57.6	0.0	1.1e-15	57.3	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|118575843|ref|YP_875586.1|	-	1.2e-06	28.4	0.0	1.3e-06	28.2	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
TMEM213	PF15192.1	gi|118575843|ref|YP_875586.1|	-	0.05	13.6	0.1	0.093	12.7	0.0	1.4	1	0	0	1	1	1	0	TMEM213	family
NIR_SIR	PF01077.17	gi|118575843|ref|YP_875586.1|	-	0.11	11.8	0.0	0.16	11.3	0.0	1.3	1	0	0	1	1	1	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
ResIII	PF04851.10	gi|118575845|ref|YP_875588.1|	-	5.1e-15	55.7	0.0	2.6e-14	53.4	0.0	2.0	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DUF3365	PF11845.3	gi|118575845|ref|YP_875588.1|	-	0.035	13.9	0.1	0.063	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3365)
Helicase_C	PF00271.26	gi|118575845|ref|YP_875588.1|	-	0.084	12.7	0.0	0.18	11.6	0.0	1.6	1	0	0	1	1	1	0	Helicase	conserved	C-terminal	domain
N6_N4_Mtase	PF01555.13	gi|118575846|ref|YP_875589.1|	-	5.8e-31	107.7	2.0	1.9e-30	106.1	1.4	1.9	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118575846|ref|YP_875589.1|	-	3.7e-05	23.7	0.0	0.0011	18.9	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|118575846|ref|YP_875589.1|	-	0.0043	16.6	0.1	0.6	9.6	0.0	2.4	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
DUF1324	PF07038.6	gi|118575847|ref|YP_875590.1|	-	1.9	8.5	6.0	0.22	11.5	1.3	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1324)
Cupredoxin_1	PF13473.1	gi|118575848|ref|YP_875591.1|	-	0.00076	19.3	0.0	0.002	17.9	0.0	1.8	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.15	gi|118575848|ref|YP_875591.1|	-	0.0019	18.3	0.0	0.0055	16.9	0.0	1.8	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
DPM2	PF07297.7	gi|118575848|ref|YP_875591.1|	-	0.18	12.1	1.7	1.1e+02	3.2	0.1	4.4	5	0	0	5	5	5	0	Dolichol	phosphate-mannose	biosynthesis	regulatory	protein	(DPM2)
PAPS_reduct	PF01507.14	gi|118575850|ref|YP_875593.1|	-	2.4e-10	40.4	0.0	4.7e-10	39.5	0.0	1.5	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.16	gi|118575850|ref|YP_875593.1|	-	0.034	13.6	0.0	1.7	8.0	0.0	2.5	2	1	0	2	2	2	0	Asparagine	synthase
DUF4007	PF13182.1	gi|118575851|ref|YP_875594.1|	-	2.9e-90	302.0	0.0	3.2e-90	301.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4007)
Aminotran_5	PF00266.14	gi|118575852|ref|YP_875595.1|	-	2.6e-67	227.1	0.0	3.1e-67	226.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|118575852|ref|YP_875595.1|	-	4.9e-06	25.7	0.0	6.4e-06	25.3	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
GRAM	PF02893.15	gi|118575854|ref|YP_875597.1|	-	1.2e-05	24.6	0.0	3.3e-05	23.3	0.0	1.7	1	0	0	1	1	1	1	GRAM	domain
DDE_Tnp_IS66	PF03050.9	gi|118575856|ref|YP_875599.1|	-	1e-33	116.7	1.8	3.9e-33	114.8	0.0	2.1	2	0	0	2	2	2	1	Transposase	IS66	family
GRAM	PF02893.15	gi|118575857|ref|YP_875600.1|	-	4e-06	26.2	0.1	1.6e-05	24.2	0.0	2.1	3	0	0	3	3	3	1	GRAM	domain
Peptidase_A17	PF05380.8	gi|118575857|ref|YP_875600.1|	-	0.11	12.3	0.3	0.22	11.3	0.2	1.4	1	0	0	1	1	1	0	Pao	retrotransposon	peptidase
Cytochrome_CBB3	PF13442.1	gi|118575858|ref|YP_875601.1|	-	0.059	13.5	0.3	0.24	11.5	0.2	2.0	1	0	0	1	1	1	0	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Fork_head_N	PF08430.7	gi|118575858|ref|YP_875601.1|	-	1.8	8.9	11.7	3.8	7.9	8.1	1.5	1	0	0	1	1	1	0	Forkhead	N-terminal	region
DUF4290	PF14123.1	gi|118575859|ref|YP_875602.1|	-	0.033	13.3	0.0	0.045	12.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4290)
MreB_Mbl	PF06723.8	gi|118575860|ref|YP_875603.1|	-	7.3e-07	28.0	2.7	4.1e-05	22.3	0.1	2.3	2	1	0	2	2	2	2	MreB/Mbl	protein
Actin	PF00022.14	gi|118575860|ref|YP_875603.1|	-	0.0018	16.7	0.1	0.12	10.8	0.0	2.1	2	0	0	2	2	2	2	Actin
T2SE	PF00437.15	gi|118575861|ref|YP_875604.1|	-	6.1e-39	133.5	0.0	8.8e-39	133.0	0.0	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|118575861|ref|YP_875604.1|	-	0.00023	20.6	0.1	0.00055	19.3	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|118575861|ref|YP_875604.1|	-	0.0019	17.6	0.3	0.0062	15.9	0.1	1.9	3	0	0	3	3	3	1	AAA	domain
ABC_tran	PF00005.22	gi|118575861|ref|YP_875604.1|	-	0.0022	18.3	0.0	0.0036	17.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
MobB	PF03205.9	gi|118575861|ref|YP_875604.1|	-	0.0026	17.4	0.0	0.0048	16.6	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.13	gi|118575861|ref|YP_875604.1|	-	0.0027	17.2	0.1	0.0045	16.4	0.1	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|118575861|ref|YP_875604.1|	-	0.0048	17.0	0.0	0.01	15.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|118575861|ref|YP_875604.1|	-	0.0057	16.5	0.0	0.0089	15.8	0.0	1.2	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Miro	PF08477.8	gi|118575861|ref|YP_875604.1|	-	0.014	15.9	0.0	0.031	14.7	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
NACHT	PF05729.7	gi|118575861|ref|YP_875604.1|	-	0.023	14.3	0.1	0.038	13.6	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|118575861|ref|YP_875604.1|	-	0.024	15.4	0.0	0.077	13.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
cobW	PF02492.14	gi|118575861|ref|YP_875604.1|	-	0.03	13.7	0.0	0.048	13.1	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|118575861|ref|YP_875604.1|	-	0.034	14.1	0.0	0.06	13.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Pox_A32	PF04665.7	gi|118575861|ref|YP_875604.1|	-	0.039	13.2	0.0	0.064	12.5	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	A32	protein
DUF87	PF01935.12	gi|118575861|ref|YP_875604.1|	-	0.04	13.7	0.5	0.072	12.9	0.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
SRP54	PF00448.17	gi|118575861|ref|YP_875604.1|	-	0.045	13.2	0.1	0.23	10.8	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_19	PF13245.1	gi|118575861|ref|YP_875604.1|	-	0.053	13.2	0.1	0.2	11.4	0.1	1.9	2	0	0	2	2	1	0	Part	of	AAA	domain
AAA_23	PF13476.1	gi|118575861|ref|YP_875604.1|	-	0.1	12.9	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|118575861|ref|YP_875604.1|	-	0.11	12.1	0.0	0.21	11.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_18	PF13238.1	gi|118575861|ref|YP_875604.1|	-	0.12	12.6	0.0	0.27	11.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|118575861|ref|YP_875604.1|	-	0.12	11.7	0.0	0.2	11.0	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|118575861|ref|YP_875604.1|	-	0.13	10.8	0.1	0.2	10.2	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_33	PF13671.1	gi|118575861|ref|YP_875604.1|	-	0.16	11.8	0.0	0.27	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|118575861|ref|YP_875604.1|	-	0.18	11.6	1.0	0.44	10.4	0.0	2.1	3	0	0	3	3	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|118575861|ref|YP_875604.1|	-	0.19	11.2	0.0	0.28	10.6	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
DUF2075	PF09848.4	gi|118575861|ref|YP_875604.1|	-	0.21	10.5	0.0	5.4	5.8	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|118575863|ref|YP_875606.1|	-	3e-36	125.4	0.3	1.9e-35	122.8	0.2	2.0	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|118575863|ref|YP_875606.1|	-	1.3e-05	25.1	0.0	2.8e-05	24.0	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|118575863|ref|YP_875606.1|	-	0.00086	18.8	0.0	0.062	12.7	0.0	2.5	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|118575863|ref|YP_875606.1|	-	0.0017	18.4	0.1	0.21	11.7	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Pox_A32	PF04665.7	gi|118575863|ref|YP_875606.1|	-	0.0079	15.5	1.1	0.078	12.2	0.0	2.7	3	0	0	3	3	3	1	Poxvirus	A32	protein
AmoC	PF04896.7	gi|118575864|ref|YP_875607.1|	-	7e-16	58.0	5.2	9e-16	57.6	3.6	1.1	1	0	0	1	1	1	1	Ammonia	monooxygenase/methane	monooxygenase,	subunit	C
PDDEXK_1	PF12705.2	gi|118575865|ref|YP_875608.1|	-	3.1e-07	30.0	0.0	5.3e-07	29.2	0.0	1.4	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF4064	PF13273.1	gi|118575868|ref|YP_875611.1|	-	0.0043	17.1	0.4	0.0052	16.8	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4064)
YqjK	PF13997.1	gi|118575868|ref|YP_875611.1|	-	0.0052	16.9	0.1	0.0052	16.9	0.1	1.6	2	0	0	2	2	2	1	YqjK-like	protein
DUF2079	PF09852.4	gi|118575868|ref|YP_875611.1|	-	0.0095	14.6	0.1	0.011	14.5	0.1	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
CCSMST1	PF15013.1	gi|118575868|ref|YP_875611.1|	-	0.063	13.2	0.1	11	5.9	0.0	2.1	2	0	0	2	2	2	0	CCSMST1	family
7TM_GPCR_Srv	PF10323.4	gi|118575868|ref|YP_875611.1|	-	0.082	12.0	0.2	0.095	11.8	0.1	1.0	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srv
Renin_r	PF07850.9	gi|118575868|ref|YP_875611.1|	-	0.089	13.1	0.6	0.089	13.1	0.4	1.9	1	1	1	2	2	2	0	Renin	receptor-like	protein
DUF2964	PF11177.3	gi|118575868|ref|YP_875611.1|	-	0.1	12.5	1.5	0.47	10.4	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2964)
TBP	PF00352.16	gi|118575869|ref|YP_875612.1|	-	7.5e-05	22.0	0.1	0.0022	17.3	0.0	2.1	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
Gmad1	PF10647.4	gi|118575870|ref|YP_875613.1|	-	0.0083	15.5	0.1	0.011	15.1	0.1	1.2	1	0	0	1	1	1	1	Lipoprotein	LpqB	beta-propeller	domain
DUF2393	PF09624.5	gi|118575870|ref|YP_875613.1|	-	0.018	14.5	0.0	0.12	11.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2393)
bPH_3	PF14470.1	gi|118575871|ref|YP_875614.1|	-	6.8e-07	29.4	0.0	8.2e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Bacterial	PH	domain
DUF2408	PF10303.4	gi|118575873|ref|YP_875616.1|	-	0.0073	16.4	0.4	0.0081	16.2	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2408)
TFIIS_M	PF07500.9	gi|118575873|ref|YP_875616.1|	-	0.019	15.0	0.4	0.023	14.7	0.2	1.3	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS),	central	domain
RNase_E_G	PF10150.4	gi|118575873|ref|YP_875616.1|	-	0.042	13.0	0.8	0.043	13.0	0.6	1.1	1	0	0	1	1	1	0	Ribonuclease	E/G	family
DUF4315	PF14193.1	gi|118575873|ref|YP_875616.1|	-	0.05	13.5	1.4	0.1	12.5	1.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4315)
Spc7	PF08317.6	gi|118575873|ref|YP_875616.1|	-	0.078	11.6	2.3	0.088	11.4	1.6	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Snapin_Pallidin	PF14712.1	gi|118575873|ref|YP_875616.1|	-	0.084	13.1	3.6	1.7	8.9	0.1	2.1	1	1	1	2	2	2	0	Snapin/Pallidin
Prefoldin	PF02996.12	gi|118575873|ref|YP_875616.1|	-	0.09	12.4	0.8	0.19	11.3	0.2	1.8	1	1	0	1	1	1	0	Prefoldin	subunit
Occludin_ELL	PF07303.8	gi|118575873|ref|YP_875616.1|	-	0.22	12.3	0.9	0.26	12.0	0.6	1.1	1	0	0	1	1	1	0	Occludin	homology	domain
BLOC1_2	PF10046.4	gi|118575873|ref|YP_875616.1|	-	0.26	11.4	3.8	3.4	7.8	0.4	2.5	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Transcrip_act	PF04949.8	gi|118575873|ref|YP_875616.1|	-	0.29	10.7	3.1	0.38	10.3	2.1	1.1	1	0	0	1	1	1	0	Transcriptional	activator
COG2	PF06148.6	gi|118575875|ref|YP_875618.1|	-	0.025	14.4	0.0	0.028	14.3	0.0	1.2	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
MCPsignal	PF00015.16	gi|118575875|ref|YP_875618.1|	-	0.05	13.1	0.6	0.065	12.7	0.4	1.2	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF4226	PF10774.4	gi|118575875|ref|YP_875618.1|	-	0.05	13.6	0.1	0.086	12.8	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4226)
Spc7	PF08317.6	gi|118575875|ref|YP_875618.1|	-	0.058	12.0	0.7	0.065	11.8	0.5	1.0	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF3768	PF12599.3	gi|118575875|ref|YP_875618.1|	-	0.088	12.7	0.1	0.31	10.9	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3768)
BLOC1_2	PF10046.4	gi|118575875|ref|YP_875618.1|	-	0.091	12.9	1.2	0.67	10.1	0.7	2.0	1	1	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Snapin_Pallidin	PF14712.1	gi|118575875|ref|YP_875618.1|	-	0.096	13.0	0.5	0.18	12.1	0.4	1.6	1	1	0	1	1	1	0	Snapin/Pallidin
TBCA	PF02970.11	gi|118575875|ref|YP_875618.1|	-	0.12	12.4	0.2	0.23	11.5	0.1	1.6	1	1	0	1	1	1	0	Tubulin	binding	cofactor	A
SHP	PF03579.8	gi|118575876|ref|YP_875619.1|	-	0.32	10.3	5.4	2.2	7.6	0.2	2.3	2	0	0	2	2	2	0	Small	hydrophobic	protein
Methyltransf_26	PF13659.1	gi|118575877|ref|YP_875620.1|	-	3.5e-08	33.4	0.0	6.5e-08	32.6	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
GtrA	PF04138.9	gi|118575880|ref|YP_875623.1|	-	0.014	15.3	4.9	0.019	14.9	3.4	1.2	1	0	0	1	1	1	0	GtrA-like	protein
UcrQ	PF02939.11	gi|118575880|ref|YP_875623.1|	-	0.05	13.4	1.0	0.12	12.1	0.7	1.7	1	1	0	1	1	1	0	UcrQ	family
DUF4232	PF14016.1	gi|118575881|ref|YP_875624.1|	-	0.0065	16.1	0.0	0.0087	15.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4232)
SNase	PF00565.12	gi|118575882|ref|YP_875625.1|	-	7.3e-06	26.2	0.0	1.2e-05	25.4	0.0	1.3	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
Methyltransf_26	PF13659.1	gi|118575884|ref|YP_875627.1|	-	5.8e-13	48.9	0.0	1.9e-12	47.2	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|118575884|ref|YP_875627.1|	-	3.2e-11	43.1	0.0	1.2e-07	31.4	0.0	2.8	2	1	0	2	2	2	2	DNA	methylase
UPF0020	PF01170.13	gi|118575884|ref|YP_875627.1|	-	0.0023	17.5	0.1	0.038	13.5	0.0	2.2	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Copper-bind	PF00127.15	gi|118575887|ref|YP_875630.1|	-	0.0096	16.1	0.0	0.03	14.5	0.0	1.8	2	0	0	2	2	2	1	Copper	binding	proteins,	plastocyanin/azurin	family
T2SF	PF00482.18	gi|118575888|ref|YP_875631.1|	-	1e-12	48.0	0.8	5.1e-07	29.6	0.0	3.2	4	0	0	4	4	4	2	Type	II	secretion	system	(T2SS),	protein	F
AAA_10	PF12846.2	gi|118575889|ref|YP_875632.1|	-	2.6e-25	89.5	0.0	3.6e-25	89.0	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|118575889|ref|YP_875632.1|	-	1.7e-07	30.2	0.0	0.0046	15.6	0.0	2.3	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF87	PF01935.12	gi|118575889|ref|YP_875632.1|	-	8.1e-07	29.0	0.0	3.8e-06	26.8	0.0	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_30	PF13604.1	gi|118575889|ref|YP_875632.1|	-	6.8e-05	22.5	0.0	0.29	10.7	0.0	2.8	2	1	1	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|118575889|ref|YP_875632.1|	-	0.00086	19.4	0.0	0.63	10.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
TraG-D_C	PF12696.2	gi|118575889|ref|YP_875632.1|	-	0.0015	18.4	0.0	0.0033	17.2	0.0	1.6	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
ABC_tran	PF00005.22	gi|118575889|ref|YP_875632.1|	-	0.0039	17.4	0.0	0.01	16.1	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA	PF00004.24	gi|118575889|ref|YP_875632.1|	-	0.011	15.9	0.0	1.6	8.9	0.0	2.5	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|118575889|ref|YP_875632.1|	-	0.021	14.7	0.0	0.047	13.6	0.0	1.7	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_17	PF13207.1	gi|118575889|ref|YP_875632.1|	-	0.025	15.3	0.0	0.086	13.6	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|118575889|ref|YP_875632.1|	-	0.028	14.3	0.0	2.1	8.2	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|118575889|ref|YP_875632.1|	-	0.14	12.0	0.0	1.2	9.1	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
OsmC	PF02566.14	gi|118575892|ref|YP_875635.1|	-	0.0066	16.6	0.0	0.013	15.6	0.0	1.5	1	1	0	1	1	1	1	OsmC-like	protein
TF_Zn_Ribbon	PF08271.7	gi|118575894|ref|YP_875637.1|	-	0.0036	16.5	0.5	0.0061	15.8	0.4	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.12	gi|118575894|ref|YP_875637.1|	-	0.031	13.8	0.0	0.054	13.0	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
Peptidase_A24	PF01478.13	gi|118575898|ref|YP_875641.1|	-	0.0022	18.1	10.8	0.0022	18.1	7.5	1.7	2	0	0	2	2	2	1	Type	IV	leader	peptidase	family
O-antigen_lig	PF13425.1	gi|118575898|ref|YP_875641.1|	-	0.085	12.8	0.2	0.085	12.8	0.1	2.0	3	0	0	3	3	3	0	O-antigen	ligase	like	membrane	protein
SGL	PF08450.7	gi|118575902|ref|YP_875645.1|	-	2.3e-26	92.7	8.8	0.0087	15.4	0.0	15.1	10	4	6	18	18	18	10	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118575902|ref|YP_875645.1|	-	7.1e-24	84.5	7.8	3.4e-06	26.3	0.1	8.8	6	2	1	8	8	8	5	Lactonase,	7-bladed	beta-propeller
Str_synth	PF03088.11	gi|118575902|ref|YP_875645.1|	-	9e-08	32.0	0.0	19	5.3	0.0	8.2	9	0	0	9	9	9	2	Strictosidine	synthase
Arylesterase	PF01731.15	gi|118575902|ref|YP_875645.1|	-	6.6e-05	22.8	0.0	57	3.8	0.0	8.9	10	0	0	10	10	10	0	Arylesterase
NHL	PF01436.16	gi|118575902|ref|YP_875645.1|	-	0.00034	20.4	17.8	28	4.9	0.0	12.3	16	0	0	16	16	16	0	NHL	repeat
ThaI	PF15514.1	gi|118575902|ref|YP_875645.1|	-	0.85	8.8	0.0	1.3e+02	1.7	0.0	3.8	5	0	0	5	5	5	0	Restriction	endonuclease	ThaI
Lactonase	PF10282.4	gi|118575903|ref|YP_875646.1|	-	0.15	11.0	0.1	10	5.0	0.0	2.2	2	0	0	2	2	2	0	Lactonase,	7-bladed	beta-propeller
TruB_C	PF09142.6	gi|118575907|ref|YP_875650.1|	-	0.064	12.9	0.7	1.2	8.8	0.0	2.1	1	1	1	2	2	2	0	tRNA	Pseudouridine	synthase	II,	C	terminal
MerR-DNA-bind	PF09278.6	gi|118575908|ref|YP_875651.1|	-	3.7	8.0	8.2	3.7	8.0	0.6	3.1	3	0	0	3	3	3	0	MerR,	DNA	binding
DUF2723	PF11028.3	gi|118575910|ref|YP_875653.1|	-	0.013	15.0	0.0	0.41	10.1	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2723)
DUF1664	PF07889.7	gi|118575910|ref|YP_875653.1|	-	0.014	15.1	0.0	0.022	14.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
RmuC	PF02646.11	gi|118575910|ref|YP_875653.1|	-	0.017	13.9	0.0	0.026	13.3	0.0	1.2	1	0	0	1	1	1	0	RmuC	family
DUF948	PF06103.6	gi|118575910|ref|YP_875653.1|	-	0.038	13.8	0.0	1.4	8.8	0.0	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
DASH_Dad1	PF08649.5	gi|118575910|ref|YP_875653.1|	-	0.041	13.5	2.6	0.82	9.4	1.8	2.3	1	1	0	1	1	1	0	DASH	complex	subunit	Dad1
Laminin_II	PF06009.7	gi|118575910|ref|YP_875653.1|	-	0.077	12.7	0.0	0.19	11.4	0.0	1.6	1	1	1	2	2	2	0	Laminin	Domain	II
DUF730	PF05325.6	gi|118575910|ref|YP_875653.1|	-	0.15	11.8	0.1	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF730)
DASH_Duo1	PF08651.5	gi|118575910|ref|YP_875653.1|	-	0.19	11.3	0.1	0.42	10.2	0.1	1.5	1	0	0	1	1	1	0	DASH	complex	subunit	Duo1
YXWGXW	PF12779.2	gi|118575914|ref|YP_875657.1|	-	0.31	10.9	4.3	0.63	10.0	3.0	1.6	1	0	0	1	1	1	0	YXWGXW	repeat	(2	copies)
DUF2254	PF10011.4	gi|118575916|ref|YP_875659.1|	-	0.021	13.3	0.1	0.055	11.9	0.0	1.6	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2254)
GAS	PF13851.1	gi|118575916|ref|YP_875659.1|	-	0.023	13.8	4.7	0.036	13.2	3.2	1.2	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
CENP-Q	PF13094.1	gi|118575916|ref|YP_875659.1|	-	0.032	14.2	4.4	0.057	13.4	3.0	1.3	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Vps53_N	PF04100.7	gi|118575916|ref|YP_875659.1|	-	0.044	12.5	3.3	0.064	12.0	2.3	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
PA26	PF04636.8	gi|118575916|ref|YP_875659.1|	-	0.091	11.4	0.9	0.13	10.9	0.6	1.1	1	0	0	1	1	1	0	PA26	p53-induced	protein	(sestrin)
IncA	PF04156.9	gi|118575916|ref|YP_875659.1|	-	0.092	12.3	1.0	0.16	11.5	0.7	1.5	1	0	0	1	1	1	0	IncA	protein
HAUS6_N	PF14661.1	gi|118575916|ref|YP_875659.1|	-	0.13	11.6	1.8	0.2	10.9	1.2	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Sigma70_ner	PF04546.8	gi|118575916|ref|YP_875659.1|	-	0.14	11.7	3.6	0.22	11.1	2.2	1.4	2	0	0	2	2	2	0	Sigma-70,	non-essential	region
LKAAEAR	PF15478.1	gi|118575916|ref|YP_875659.1|	-	0.47	10.7	3.0	1	9.5	2.1	1.5	1	0	0	1	1	1	0	Family	of	unknown	function	with	LKAAEAR	motif
Tim17	PF02466.14	gi|118575921|ref|YP_875664.1|	-	0.002	18.1	0.5	0.024	14.6	0.0	2.2	2	0	0	2	2	2	1	Tim17/Tim22/Tim23/Pmp24	family
Imm41	PF15583.1	gi|118575921|ref|YP_875664.1|	-	0.022	14.5	10.7	2	8.2	0.3	3.7	1	1	3	4	4	4	0	Immunity	protein	41
DUF16	PF01519.11	gi|118575921|ref|YP_875664.1|	-	0.56	10.4	2.4	1.4	9.1	1.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
Tim17	PF02466.14	gi|118575922|ref|YP_875665.1|	-	0.0063	16.5	0.0	0.0072	16.3	0.0	1.1	1	0	0	1	1	1	1	Tim17/Tim22/Tim23/Pmp24	family
DUF16	PF01519.11	gi|118575922|ref|YP_875665.1|	-	0.038	14.2	0.1	0.05	13.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
CENP-Q	PF13094.1	gi|118575923|ref|YP_875666.1|	-	0.008	16.2	1.0	0.015	15.3	0.7	1.4	1	1	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF16	PF01519.11	gi|118575923|ref|YP_875666.1|	-	0.012	15.8	0.5	0.014	15.5	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
Bacillus_HBL	PF05791.6	gi|118575923|ref|YP_875666.1|	-	0.05	12.9	0.1	0.06	12.7	0.1	1.0	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
LTXXQ	PF07813.7	gi|118575923|ref|YP_875666.1|	-	0.15	12.5	2.0	0.19	12.2	1.4	1.1	1	0	0	1	1	1	0	LTXXQ	motif	family	protein
DUF16	PF01519.11	gi|118575924|ref|YP_875667.1|	-	0.0011	19.0	0.2	0.0013	18.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF16
Imm41	PF15583.1	gi|118575925|ref|YP_875668.1|	-	0.17	11.6	4.7	1.3	8.7	0.2	2.9	1	1	2	3	3	3	0	Immunity	protein	41
Laminin_G_3	PF13385.1	gi|118575928|ref|YP_875671.1|	-	0.073	13.2	0.0	0.11	12.7	0.0	1.5	1	1	0	1	1	1	0	Concanavalin	A-like	lectin/glucanases	superfamily
YXWGXW	PF12779.2	gi|118575929|ref|YP_875672.1|	-	0.31	10.9	4.3	0.63	10.0	3.0	1.6	1	0	0	1	1	1	0	YXWGXW	repeat	(2	copies)
DUF16	PF01519.11	gi|118575931|ref|YP_875674.1|	-	0.0052	16.9	1.1	0.0052	16.9	0.8	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF16
Tim17	PF02466.14	gi|118575931|ref|YP_875674.1|	-	0.0054	16.7	1.1	0.048	13.6	0.0	2.2	1	1	0	2	2	2	1	Tim17/Tim22/Tim23/Pmp24	family
DUF3160	PF11369.3	gi|118575931|ref|YP_875674.1|	-	0.17	10.2	0.1	0.22	9.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3160)
DUF16	PF01519.11	gi|118575932|ref|YP_875675.1|	-	4e-05	23.7	0.4	4.8e-05	23.5	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF16
Tim17	PF02466.14	gi|118575932|ref|YP_875675.1|	-	0.008	16.2	0.0	0.0086	16.1	0.0	1.1	1	0	0	1	1	1	1	Tim17/Tim22/Tim23/Pmp24	family
TMP_2	PF06791.8	gi|118575932|ref|YP_875675.1|	-	0.018	14.6	0.2	0.023	14.3	0.2	1.1	1	0	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
PBP_like	PF12727.2	gi|118575932|ref|YP_875675.1|	-	0.12	11.3	0.0	0.14	11.0	0.0	1.0	1	0	0	1	1	1	0	PBP	superfamily	domain
AAA_13	PF13166.1	gi|118575932|ref|YP_875675.1|	-	0.14	10.6	0.2	0.16	10.4	0.1	1.0	1	0	0	1	1	1	0	AAA	domain
DUF16	PF01519.11	gi|118575933|ref|YP_875676.1|	-	0.00095	19.3	2.4	0.0016	18.6	1.6	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF16
CENP-Q	PF13094.1	gi|118575933|ref|YP_875676.1|	-	0.0014	18.6	1.0	0.0018	18.2	0.7	1.1	1	0	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Tim17	PF02466.14	gi|118575933|ref|YP_875676.1|	-	0.0026	17.7	0.1	0.041	13.9	0.0	1.9	1	1	1	2	2	2	1	Tim17/Tim22/Tim23/Pmp24	family
AAA_13	PF13166.1	gi|118575933|ref|YP_875676.1|	-	0.01	14.3	0.8	0.012	14.0	0.5	1.0	1	0	0	1	1	1	0	AAA	domain
Phospholip_B	PF04916.8	gi|118575933|ref|YP_875676.1|	-	0.019	13.0	0.0	0.022	12.8	0.0	1.0	1	0	0	1	1	1	0	Phospholipase	B
MCPsignal	PF00015.16	gi|118575933|ref|YP_875676.1|	-	0.022	14.2	0.5	0.028	13.9	0.3	1.1	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF3160	PF11369.3	gi|118575933|ref|YP_875676.1|	-	0.032	12.5	0.3	0.037	12.3	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3160)
Bombolitin	PF08096.6	gi|118575933|ref|YP_875676.1|	-	0.045	13.8	1.4	32	4.8	0.0	3.3	3	0	0	3	3	3	0	Bombolitin	family
Laminin_II	PF06009.7	gi|118575933|ref|YP_875676.1|	-	0.046	13.4	0.5	0.18	11.5	0.1	1.8	1	1	1	2	2	2	0	Laminin	Domain	II
DUF948	PF06103.6	gi|118575933|ref|YP_875676.1|	-	0.06	13.2	1.3	4	7.3	0.8	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF241	PF03087.9	gi|118575933|ref|YP_875676.1|	-	0.065	12.7	0.7	0.081	12.3	0.5	1.1	1	0	0	1	1	1	0	Arabidopsis	protein	of	unknown	function
DUF1664	PF07889.7	gi|118575933|ref|YP_875676.1|	-	0.11	12.2	2.0	0.13	12.0	1.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Transposase_22	PF02994.9	gi|118575933|ref|YP_875676.1|	-	0.24	9.8	4.0	0.28	9.6	2.7	1.0	1	0	0	1	1	1	0	L1	transposable	element
Lumazine_bd	PF12870.2	gi|118575933|ref|YP_875676.1|	-	0.24	11.4	6.5	0.34	10.9	4.2	1.4	1	1	0	1	1	1	0	Lumazine-binding	domain
DUF16	PF01519.11	gi|118575934|ref|YP_875677.1|	-	0.012	15.7	0.1	0.016	15.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
Tim17	PF02466.14	gi|118575934|ref|YP_875677.1|	-	0.07	13.1	0.0	0.078	13.0	0.0	1.1	1	0	0	1	1	1	0	Tim17/Tim22/Tim23/Pmp24	family
DUF211	PF02680.9	gi|118575935|ref|YP_875678.1|	-	0.054	13.2	0.0	0.069	12.9	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	ArCR,	COG1888
Imm41	PF15583.1	gi|118575935|ref|YP_875678.1|	-	0.44	10.3	2.9	3.5	7.3	0.5	2.0	1	1	1	2	2	2	0	Immunity	protein	41
Polysacc_synt_3	PF13440.1	gi|118575938|ref|YP_875681.1|	-	0.021	14.3	0.6	0.028	13.8	0.4	1.1	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
Apolipoprotein	PF01442.13	gi|118575938|ref|YP_875681.1|	-	0.029	13.8	0.0	0.036	13.5	0.0	1.1	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
PIG-F	PF06699.6	gi|118575938|ref|YP_875681.1|	-	0.06	13.2	0.1	0.078	12.9	0.1	1.1	1	0	0	1	1	1	0	GPI	biosynthesis	protein	family	Pig-F
Sec5	PF15469.1	gi|118575939|ref|YP_875682.1|	-	0.13	11.9	0.1	0.16	11.6	0.0	1.1	1	0	0	1	1	1	0	Exocyst	complex	component	Sec5
MFS_1	PF07690.11	gi|118575940|ref|YP_875683.1|	-	6.4e-05	21.8	0.1	7.6e-05	21.5	0.1	1.1	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
TauE	PF01925.14	gi|118575940|ref|YP_875683.1|	-	0.0044	16.5	0.6	0.005	16.3	0.4	1.2	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF2721	PF11026.3	gi|118575940|ref|YP_875683.1|	-	0.013	15.1	0.1	0.021	14.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2721)
DUF948	PF06103.6	gi|118575940|ref|YP_875683.1|	-	0.014	15.2	0.9	0.44	10.4	0.1	2.5	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
BatA	PF07584.6	gi|118575940|ref|YP_875683.1|	-	0.023	14.8	0.0	0.049	13.8	0.0	1.5	1	0	0	1	1	1	0	Aerotolerance	regulator	N-terminal
Laminin_II	PF06009.7	gi|118575940|ref|YP_875683.1|	-	0.098	12.4	0.1	0.16	11.7	0.1	1.3	1	0	0	1	1	1	0	Laminin	Domain	II
Ribosomal_S30	PF04758.9	gi|118575942|ref|YP_875685.1|	-	0.0064	16.2	0.0	0.017	14.8	0.0	1.7	1	0	0	1	1	1	1	Ribosomal	protein	S30
RESP18	PF14948.1	gi|118575942|ref|YP_875685.1|	-	1.4	9.0	5.6	4	7.5	0.1	2.4	1	1	1	2	2	2	0	RESP18	domain
Totivirus_coat	PF05518.6	gi|118575943|ref|YP_875686.1|	-	5.4	4.7	6.0	5.2	4.7	4.2	1.0	1	0	0	1	1	1	0	Totivirus	coat	protein
RecR	PF02132.10	gi|118575944|ref|YP_875687.1|	-	0.00041	19.7	4.0	0.0031	16.9	2.8	2.2	1	1	0	1	1	1	1	RecR	protein
GFA	PF04828.9	gi|118575944|ref|YP_875687.1|	-	0.17	11.8	3.6	0.54	10.2	2.5	1.8	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
DZR	PF12773.2	gi|118575944|ref|YP_875687.1|	-	0.53	10.1	6.1	0.85	9.4	4.2	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
ASFV_p27	PF06556.6	gi|118575944|ref|YP_875687.1|	-	0.56	10.1	2.5	0.61	9.9	1.1	1.4	1	1	0	1	1	1	0	IAP-like	protein	p27	C-terminus
DUF1660	PF07874.6	gi|118575944|ref|YP_875687.1|	-	1	9.6	7.8	0.66	10.3	0.9	2.2	1	1	1	2	2	2	0	Prophage	protein	(DUF1660)
zf-TFIIB	PF13453.1	gi|118575944|ref|YP_875687.1|	-	7.1	5.9	7.8	3.9	6.7	0.3	2.7	2	1	1	3	3	3	0	Transcription	factor	zinc-finger
UbiA	PF01040.13	gi|118575946|ref|YP_875689.1|	-	0.0098	15.1	1.2	0.015	14.5	0.8	1.3	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
DUF4118	PF13493.1	gi|118575946|ref|YP_875689.1|	-	0.0098	16.0	1.3	0.0098	16.0	0.9	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4118)
ATP_synt_I	PF03899.10	gi|118575946|ref|YP_875689.1|	-	0.038	14.1	0.5	0.36	11.0	0.0	2.0	2	0	0	2	2	2	0	ATP	synthase	I	chain
DUF2975	PF11188.3	gi|118575946|ref|YP_875689.1|	-	0.04	13.6	1.5	0.068	12.8	1.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
MFS_1	PF07690.11	gi|118575946|ref|YP_875689.1|	-	0.098	11.3	2.0	0.13	10.9	1.4	1.3	1	1	0	1	1	1	0	Major	Facilitator	Superfamily
Frag1	PF10277.4	gi|118575946|ref|YP_875689.1|	-	0.1	12.0	0.6	0.21	11.0	0.4	1.5	1	1	0	1	1	1	0	Frag1/DRAM/Sfk1	family
Acyl_transf_3	PF01757.17	gi|118575946|ref|YP_875689.1|	-	0.13	11.0	4.3	0.037	12.8	0.5	1.7	1	1	1	2	2	2	0	Acyltransferase	family
DUF4131	PF13567.1	gi|118575946|ref|YP_875689.1|	-	0.13	11.6	1.8	0.94	8.8	0.1	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
YfhO	PF09586.5	gi|118575946|ref|YP_875689.1|	-	0.14	10.1	0.1	0.16	9.9	0.1	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
ATP-synt_8	PF00895.15	gi|118575946|ref|YP_875689.1|	-	5.8	7.2	10.1	35	4.7	2.2	3.0	1	1	2	3	3	3	0	ATP	synthase	protein	8
NinG	PF05766.7	gi|118575950|ref|YP_875693.1|	-	0.0039	16.9	2.9	0.0039	16.9	2.0	1.6	1	1	0	1	1	1	1	Bacteriophage	Lambda	NinG	protein
C1_1	PF00130.17	gi|118575950|ref|YP_875693.1|	-	0.4	10.4	15.2	1.7	8.4	3.8	2.7	3	0	0	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DisA_N	PF02457.11	gi|118575951|ref|YP_875694.1|	-	0.14	11.3	0.2	0.19	10.8	0.1	1.3	1	0	0	1	1	1	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
Herpes_U55	PF06501.6	gi|118575959|ref|YP_875702.1|	-	0.11	11.0	0.0	0.12	10.9	0.0	1.0	1	0	0	1	1	1	0	Human	herpesvirus	U55	protein
GXWXG	PF14231.1	gi|118575959|ref|YP_875702.1|	-	0.12	12.0	0.1	0.22	11.1	0.1	1.3	1	0	0	1	1	1	0	GXWXG	protein
Metallophos_2	PF12850.2	gi|118575962|ref|YP_875705.1|	-	6.7e-06	26.0	0.0	1.4e-05	25.0	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|118575962|ref|YP_875705.1|	-	7.9e-06	25.3	0.9	2.1e-05	24.0	0.0	1.8	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
CPSase_L_D2	PF02786.12	gi|118575963|ref|YP_875706.1|	-	1e-16	60.8	0.0	1.6e-16	60.2	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
MGS	PF02142.17	gi|118575963|ref|YP_875706.1|	-	1.1e-14	54.0	0.0	3.1e-14	52.6	0.0	1.8	1	0	0	1	1	1	1	MGS-like	domain
ATP-grasp_4	PF13535.1	gi|118575963|ref|YP_875706.1|	-	2.4e-12	46.9	0.0	7.9e-12	45.2	0.0	1.8	2	0	0	2	2	2	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118575963|ref|YP_875706.1|	-	1.2e-08	34.0	0.0	6e-08	31.7	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|118575963|ref|YP_875706.1|	-	0.0025	17.1	0.0	0.0045	16.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|118575963|ref|YP_875706.1|	-	0.08	12.8	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|118575964|ref|YP_875707.1|	-	2.4e-71	239.3	0.0	3.6e-71	238.8	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|118575964|ref|YP_875707.1|	-	7.8e-39	132.2	0.0	1.5e-38	131.3	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|118575964|ref|YP_875707.1|	-	8.1e-26	90.2	0.0	3.5e-16	59.2	0.0	3.0	3	0	0	3	3	3	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|118575964|ref|YP_875707.1|	-	1.8e-16	60.3	0.0	3.5e-16	59.4	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118575964|ref|YP_875707.1|	-	6.8e-07	28.3	0.0	0.015	14.0	0.0	2.7	3	0	0	3	3	3	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|118575964|ref|YP_875707.1|	-	6e-06	25.7	0.0	9.3e-06	25.1	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|118575964|ref|YP_875707.1|	-	0.0046	16.3	0.0	0.0089	15.4	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
GARS_A	PF01071.14	gi|118575964|ref|YP_875707.1|	-	0.094	12.2	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.1	gi|118575964|ref|YP_875707.1|	-	0.13	11.4	0.0	0.3	10.2	0.0	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
CPSase_sm_chain	PF00988.17	gi|118575965|ref|YP_875708.1|	-	4.2e-50	168.6	0.0	9e-50	167.5	0.0	1.5	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|118575965|ref|YP_875708.1|	-	2e-41	141.5	0.0	2.7e-41	141.1	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118575965|ref|YP_875708.1|	-	5.6e-08	32.4	0.1	5.5e-06	25.9	0.1	2.1	1	1	0	1	1	1	1	Peptidase	C26
GATase_5	PF13507.1	gi|118575965|ref|YP_875708.1|	-	0.13	11.0	0.0	2.3	7.0	0.0	2.1	2	0	0	2	2	2	0	CobB/CobQ-like	glutamine	amidotransferase	domain
PIN	PF01850.16	gi|118575967|ref|YP_875710.1|	-	0.0013	19.0	0.1	0.0025	18.1	0.0	1.4	1	0	0	1	1	1	1	PIN	domain
EF-hand_6	PF13405.1	gi|118575969|ref|YP_875712.1|	-	0.029	14.2	1.5	0.63	10.0	0.0	3.1	2	1	0	2	2	2	0	EF-hand	domain
PIN	PF01850.16	gi|118575969|ref|YP_875712.1|	-	0.13	12.5	0.1	0.93	9.8	0.1	2.2	1	1	0	1	1	1	0	PIN	domain
EF-hand_5	PF13202.1	gi|118575970|ref|YP_875713.1|	-	0.25	10.7	1.1	0.37	10.2	0.1	1.8	2	0	0	2	2	2	0	EF	hand
eIF-1a	PF01176.14	gi|118575973|ref|YP_875716.1|	-	3.2e-20	71.3	0.7	4.5e-20	70.8	0.5	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
TAF8_C	PF10406.4	gi|118575973|ref|YP_875716.1|	-	0.055	13.5	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	Transcription	factor	TFIID	complex	subunit	8	C-term
RIO1	PF01163.17	gi|118575974|ref|YP_875717.1|	-	8e-26	90.5	0.0	1e-25	90.2	0.0	1.1	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|118575974|ref|YP_875717.1|	-	0.043	13.5	0.1	0.055	13.2	0.1	1.3	1	1	0	1	1	1	0	Phosphotransferase	enzyme	family
KH_1	PF00013.24	gi|118575975|ref|YP_875718.1|	-	4.7e-17	61.3	3.8	5.9e-09	35.4	0.0	2.5	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|118575975|ref|YP_875718.1|	-	3.5e-09	36.1	5.0	0.0011	18.5	1.4	2.6	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.12	gi|118575975|ref|YP_875718.1|	-	0.0045	16.5	2.0	1.4	8.5	0.1	2.3	2	0	0	2	2	2	2	KH	domain
Vault	PF01505.13	gi|118575975|ref|YP_875718.1|	-	0.053	13.5	0.1	0.12	12.3	0.0	1.7	2	0	0	2	2	2	0	Major	Vault	Protein	repeat
Erythro-docking	PF09277.6	gi|118575975|ref|YP_875718.1|	-	0.055	13.1	0.3	0.13	12.0	0.2	1.6	1	0	0	1	1	1	0	Erythronolide	synthase,	docking
DUF3343	PF11823.3	gi|118575975|ref|YP_875718.1|	-	0.15	11.3	0.1	0.27	10.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3343)
HATPase_c	PF02518.21	gi|118575976|ref|YP_875719.1|	-	1.2e-07	31.3	0.0	3.9e-07	29.7	0.0	1.8	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|118575976|ref|YP_875719.1|	-	1.3e-07	31.3	0.0	2.5e-07	30.4	0.0	1.5	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Topo-VIb_trans	PF09239.6	gi|118575977|ref|YP_875720.1|	-	2.2e-56	189.7	0.0	3e-56	189.3	0.0	1.1	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
TP6A_N	PF04406.9	gi|118575978|ref|YP_875721.1|	-	9.3e-19	66.8	0.1	1.7e-18	66.0	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
Toprim	PF01751.17	gi|118575978|ref|YP_875721.1|	-	0.076	12.9	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Toprim	domain
SNARE_assoc	PF09335.6	gi|118575979|ref|YP_875722.1|	-	0.017	15.2	0.1	0.024	14.8	0.0	1.3	1	0	0	1	1	1	0	SNARE	associated	Golgi	protein
Beta-lactamase	PF00144.19	gi|118575981|ref|YP_875724.1|	-	0.074	12.0	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Beta-lactamase
Lant_dehyd_C	PF04738.8	gi|118575984|ref|YP_875727.1|	-	0.072	11.3	0.1	0.11	10.7	0.0	1.3	1	1	0	1	1	1	0	Lantibiotic	dehydratase,	C	terminus
PNP_UDP_1	PF01048.15	gi|118575985|ref|YP_875728.1|	-	2.6e-43	147.6	0.1	2.9e-43	147.5	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Pribosyltran	PF00156.22	gi|118575986|ref|YP_875729.1|	-	1.8e-17	63.1	0.1	2.3e-17	62.8	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|118575986|ref|YP_875729.1|	-	3.6e-05	23.0	0.0	4.3e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
A2M_N	PF01835.14	gi|118575987|ref|YP_875730.1|	-	7.7e-19	67.7	0.1	3.1e-05	24.1	0.0	5.1	5	0	0	5	5	5	4	MG2	domain
EF-hand_1	PF00036.27	gi|118575987|ref|YP_875730.1|	-	0.17	11.2	0.2	0.4	10.0	0.2	1.7	1	0	0	1	1	1	0	EF	hand
DUF1910	PF08928.5	gi|118575987|ref|YP_875730.1|	-	0.31	11.0	0.0	0.59	10.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1910)
AAA_15	PF13175.1	gi|118575988|ref|YP_875731.1|	-	6.2e-22	78.2	0.0	7.1e-13	48.3	0.0	2.4	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_21	PF13304.1	gi|118575988|ref|YP_875731.1|	-	4.6e-12	46.4	9.0	1.3e-06	28.6	3.5	3.6	2	1	0	3	3	3	2	AAA	domain
AAA_23	PF13476.1	gi|118575988|ref|YP_875731.1|	-	0.00011	22.6	3.1	0.00053	20.3	2.1	2.1	1	1	0	1	1	1	1	AAA	domain
DUF2813	PF11398.3	gi|118575988|ref|YP_875731.1|	-	0.00075	18.6	0.0	0.64	9.0	0.0	3.0	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF2813)
ABC_tran	PF00005.22	gi|118575988|ref|YP_875731.1|	-	0.00099	19.4	0.1	0.0052	17.0	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_29	PF13555.1	gi|118575988|ref|YP_875731.1|	-	0.0058	16.1	0.0	0.015	14.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|118575988|ref|YP_875731.1|	-	0.026	14.5	0.0	0.083	12.8	0.0	1.9	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF4147	PF13660.1	gi|118575993|ref|YP_875736.1|	-	8.1e-64	214.9	0.2	1e-63	214.6	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|118575993|ref|YP_875736.1|	-	1.8e-28	98.7	1.4	4e-28	97.6	1.0	1.6	1	0	0	1	1	1	1	MOFRL	family
Citrate_synt	PF00285.16	gi|118575996|ref|YP_875739.1|	-	3.7e-137	456.8	0.1	4.2e-137	456.6	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
DUF4284	PF14112.1	gi|118575997|ref|YP_875740.1|	-	0.0081	16.6	0.2	0.01	16.3	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4284)
Syntaxin-6_N	PF09177.6	gi|118575997|ref|YP_875740.1|	-	0.0087	16.4	0.7	0.013	15.9	0.5	1.3	1	0	0	1	1	1	1	Syntaxin	6,	N-terminal
RNB	PF00773.14	gi|118575997|ref|YP_875740.1|	-	0.0087	15.3	0.4	0.0097	15.2	0.3	1.1	1	0	0	1	1	1	1	RNB	domain
DUF445	PF04286.7	gi|118575997|ref|YP_875740.1|	-	0.014	14.9	0.6	0.016	14.7	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Mo25	PF08569.6	gi|118575997|ref|YP_875740.1|	-	0.018	14.0	1.8	0.056	12.4	0.9	1.8	1	1	1	2	2	2	0	Mo25-like
LXG	PF04740.7	gi|118575997|ref|YP_875740.1|	-	0.044	13.5	1.1	0.45	10.2	0.5	1.9	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
Copper-fist	PF00649.13	gi|118576001|ref|YP_875744.1|	-	1.1	8.5	6.8	0.87	8.8	1.5	2.1	2	0	0	2	2	2	0	Copper	fist	DNA	binding	domain
zf-TRAF	PF02176.13	gi|118576004|ref|YP_875747.1|	-	0.37	11.2	6.4	0.24	11.8	2.6	2.0	2	0	0	2	2	2	0	TRAF-type	zinc	finger
UBN2	PF14223.1	gi|118576005|ref|YP_875748.1|	-	0.058	13.1	0.1	0.07	12.9	0.1	1.2	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
Cas_Cas1	PF01867.11	gi|118576005|ref|YP_875748.1|	-	0.082	11.9	0.2	0.097	11.7	0.1	1.0	1	0	0	1	1	1	0	CRISPR	associated	protein	Cas1
IL2	PF00715.12	gi|118576005|ref|YP_875748.1|	-	0.12	12.1	0.1	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	Interleukin	2
P22_AR_C	PF10548.4	gi|118576007|ref|YP_875750.1|	-	0.024	14.4	0.1	0.034	14.0	0.1	1.2	1	0	0	1	1	1	0	P22AR	C-terminal	domain
Vps5	PF09325.5	gi|118576007|ref|YP_875750.1|	-	0.036	13.2	0.1	0.036	13.2	0.1	1.1	1	0	0	1	1	1	0	Vps5	C	terminal	like
BLOC1_2	PF10046.4	gi|118576007|ref|YP_875750.1|	-	0.065	13.3	0.0	0.074	13.1	0.0	1.1	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Syntaxin-6_N	PF09177.6	gi|118576007|ref|YP_875750.1|	-	0.14	12.5	0.2	0.3	11.5	0.1	1.6	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DHHA1	PF02272.14	gi|118576009|ref|YP_875752.1|	-	2.8e-09	36.5	0.5	6.7e-09	35.3	0.4	1.6	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.15	gi|118576009|ref|YP_875752.1|	-	0.00032	20.3	0.1	0.00088	18.9	0.1	1.7	1	1	0	1	1	1	1	DHH	family
SGL	PF08450.7	gi|118576010|ref|YP_875753.1|	-	1.2e-06	28.1	3.6	0.26	10.6	0.0	6.3	6	0	0	6	6	6	2	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576010|ref|YP_875753.1|	-	2.7e-05	23.4	0.1	0.53	9.3	0.0	4.8	3	2	0	3	3	3	2	Lactonase,	7-bladed	beta-propeller
WD40	PF00400.27	gi|118576010|ref|YP_875753.1|	-	0.0006	19.5	0.0	38	4.3	0.0	6.7	8	0	0	8	8	8	0	WD	domain,	G-beta	repeat
Arylesterase	PF01731.15	gi|118576010|ref|YP_875753.1|	-	0.058	13.3	0.1	43	4.1	0.0	4.2	6	0	0	6	6	6	0	Arylesterase
YjgF_endoribonc	PF14588.1	gi|118576012|ref|YP_875755.1|	-	4.6e-36	123.9	0.0	5.1e-36	123.8	0.0	1.0	1	0	0	1	1	1	1	YjgF/chorismate_mutase-like,	putative	endoribonuclease
Ribonuc_L-PSP	PF01042.16	gi|118576012|ref|YP_875755.1|	-	2.8e-23	81.9	0.0	3.5e-23	81.6	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Lactonase	PF10282.4	gi|118576013|ref|YP_875756.1|	-	4e-11	42.5	0.1	0.028	13.4	0.0	5.2	3	2	1	4	4	4	3	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118576013|ref|YP_875756.1|	-	1.4e-06	27.8	0.4	8	5.7	0.0	6.6	6	1	1	8	8	8	2	SMP-30/Gluconolaconase/LRE-like	region
WD40	PF00400.27	gi|118576013|ref|YP_875756.1|	-	4.3e-05	23.2	0.2	11	6.0	0.0	7.7	10	0	0	10	10	10	1	WD	domain,	G-beta	repeat
PD40	PF07676.7	gi|118576013|ref|YP_875756.1|	-	0.0011	18.5	8.3	30	4.4	0.0	6.4	6	0	0	6	6	6	0	WD40-like	Beta	Propeller	Repeat
SdiA-regulated	PF06977.6	gi|118576013|ref|YP_875756.1|	-	0.58	9.0	0.0	1.7	7.5	0.0	1.8	1	0	0	1	1	1	0	SdiA-regulated
SGL	PF08450.7	gi|118576014|ref|YP_875757.1|	-	1.5e-50	171.8	46.3	0.28	10.5	0.0	44.2	33	14	10	48	48	48	9	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576014|ref|YP_875757.1|	-	3.2e-48	164.5	8.9	0.00017	20.7	0.0	31.1	35	5	3	38	38	38	7	Lactonase,	7-bladed	beta-propeller
Str_synth	PF03088.11	gi|118576014|ref|YP_875757.1|	-	1.3e-14	53.9	0.0	0.46	10.5	0.0	16.4	22	0	0	22	22	17	2	Strictosidine	synthase
Arylesterase	PF01731.15	gi|118576014|ref|YP_875757.1|	-	3e-10	39.9	0.0	7.6	6.5	0.0	13.9	16	0	0	16	16	14	1	Arylesterase
NHL	PF01436.16	gi|118576014|ref|YP_875757.1|	-	0.00097	18.9	56.4	24	5.0	0.0	26.5	32	0	0	32	32	28	0	NHL	repeat
Cadherin-like	PF12733.2	gi|118576014|ref|YP_875757.1|	-	0.002	18.3	0.8	33	4.8	0.0	6.7	4	0	0	4	4	4	0	Cadherin-like	beta	sandwich	domain
GSDH	PF07995.6	gi|118576014|ref|YP_875757.1|	-	0.0056	15.8	0.0	21	4.0	0.0	6.5	5	0	0	5	5	5	0	Glucose	/	Sorbosone	dehydrogenase
DUF1513	PF07433.6	gi|118576014|ref|YP_875757.1|	-	0.01	14.7	4.1	2.7	6.7	0.0	6.5	7	0	0	7	7	7	0	Protein	of	unknown	function	(DUF1513)
DUF552	PF04472.7	gi|118576014|ref|YP_875757.1|	-	0.033	14.0	0.3	39	4.2	0.0	3.9	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF552)
WD40	PF00400.27	gi|118576014|ref|YP_875757.1|	-	0.23	11.3	43.1	1.6	8.7	0.1	15.1	16	0	0	16	16	13	0	WD	domain,	G-beta	repeat
SdiA-regulated	PF06977.6	gi|118576014|ref|YP_875757.1|	-	0.68	8.8	0.0	1.5e+02	1.1	0.0	4.8	4	0	0	4	4	4	0	SdiA-regulated
Nucleoporin_N	PF08801.6	gi|118576014|ref|YP_875757.1|	-	1.8	7.2	0.0	1.7e+02	0.7	0.0	3.8	5	0	0	5	5	5	0	Nup133	N	terminal	like
Haemocyan_bet_s	PF14830.1	gi|118576014|ref|YP_875757.1|	-	4	7.1	0.0	2.4e+02	1.5	0.0	3.7	4	0	0	4	4	4	0	Haemocyanin	beta-sandwich
NdhN	PF11909.3	gi|118576014|ref|YP_875757.1|	-	4.3	6.6	0.0	2.1e+02	1.1	0.0	2.9	4	0	0	4	4	4	0	NADH-quinone	oxidoreductase	cyanobacterial	subunit	N
DUF839	PF05787.8	gi|118576014|ref|YP_875757.1|	-	4.6	6.0	8.2	33	3.2	0.0	5.3	7	0	0	7	7	7	0	Bacterial	protein	of	unknown	function	(DUF839)
BON	PF04972.12	gi|118576014|ref|YP_875757.1|	-	4.7	7.0	0.3	4.8e+02	0.6	0.0	3.9	5	0	0	5	5	5	0	BON	domain
Phytase-like	PF13449.1	gi|118576014|ref|YP_875757.1|	-	5.1	6.2	12.4	48	3.0	0.0	7.0	6	0	0	6	6	6	0	Esterase-like	activity	of	phytase
TrmB	PF01978.14	gi|118576015|ref|YP_875758.1|	-	1.6e-18	66.1	0.0	2.6e-18	65.4	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|118576015|ref|YP_875758.1|	-	0.00053	19.5	1.1	0.0017	17.8	0.1	2.4	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
PadR	PF03551.9	gi|118576015|ref|YP_875758.1|	-	0.024	14.3	0.0	0.048	13.4	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_9	PF08221.6	gi|118576015|ref|YP_875758.1|	-	0.068	13.0	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
MarR	PF01047.17	gi|118576015|ref|YP_875758.1|	-	0.079	12.6	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	MarR	family
AAA	PF00004.24	gi|118576017|ref|YP_875760.1|	-	3.3e-35	121.1	0.0	5.5e-35	120.4	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|118576017|ref|YP_875760.1|	-	4.1e-09	36.1	2.2	7e-09	35.4	0.8	1.9	2	0	0	2	2	2	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_2	PF07724.9	gi|118576017|ref|YP_875760.1|	-	4.2e-07	30.0	0.0	7.5e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|118576017|ref|YP_875760.1|	-	2.6e-06	26.6	0.0	6e-06	25.4	0.0	1.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|118576017|ref|YP_875760.1|	-	2.6e-05	24.1	0.0	5.1e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|118576017|ref|YP_875760.1|	-	4.5e-05	23.5	0.1	0.0045	16.9	0.0	3.0	1	1	1	3	3	3	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|118576017|ref|YP_875760.1|	-	7.5e-05	22.8	0.0	0.00051	20.1	0.0	2.3	2	1	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|118576017|ref|YP_875760.1|	-	0.0001	23.0	0.1	0.00038	21.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|118576017|ref|YP_875760.1|	-	0.0003	19.9	0.0	0.00091	18.3	0.0	1.8	2	0	0	2	2	2	1	Zeta	toxin
Vps4_C	PF09336.5	gi|118576017|ref|YP_875760.1|	-	0.0018	18.0	0.1	0.0092	15.8	0.0	2.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_25	PF13481.1	gi|118576017|ref|YP_875760.1|	-	0.0024	17.3	0.2	0.012	15.0	0.1	2.0	1	1	1	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|118576017|ref|YP_875760.1|	-	0.0029	17.3	0.0	0.93	9.1	0.0	2.4	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_5	PF07728.9	gi|118576017|ref|YP_875760.1|	-	0.0033	17.1	0.0	0.061	13.0	0.0	2.7	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.1	gi|118576017|ref|YP_875760.1|	-	0.0064	16.0	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|118576017|ref|YP_875760.1|	-	0.008	16.0	0.0	0.031	14.1	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|118576017|ref|YP_875760.1|	-	0.01	15.2	0.1	0.039	13.3	0.1	1.9	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|118576017|ref|YP_875760.1|	-	0.017	15.3	0.0	0.05	13.9	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|118576017|ref|YP_875760.1|	-	0.025	13.7	0.0	0.055	12.6	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
TIP49	PF06068.8	gi|118576017|ref|YP_875760.1|	-	0.027	13.1	0.0	0.045	12.4	0.0	1.4	1	0	0	1	1	1	0	TIP49	C-terminus
KAP_NTPase	PF07693.9	gi|118576017|ref|YP_875760.1|	-	0.036	13.0	0.0	0.35	9.8	0.0	1.9	1	1	1	2	2	2	0	KAP	family	P-loop	domain
RNA_helicase	PF00910.17	gi|118576017|ref|YP_875760.1|	-	0.04	14.0	0.0	0.11	12.6	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
NACHT	PF05729.7	gi|118576017|ref|YP_875760.1|	-	0.083	12.5	0.0	0.2	11.3	0.0	1.6	2	0	0	2	2	1	0	NACHT	domain
AAA_19	PF13245.1	gi|118576017|ref|YP_875760.1|	-	0.087	12.5	0.0	0.22	11.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
N6_N4_Mtase	PF01555.13	gi|118576019|ref|YP_875762.1|	-	1.2e-10	41.2	0.0	1.7e-08	34.2	0.0	2.4	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576019|ref|YP_875762.1|	-	1.2e-05	25.3	0.0	2.8e-05	24.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576019|ref|YP_875762.1|	-	4.7e-05	23.0	0.0	9.9e-05	21.9	0.0	1.5	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_15	PF09445.5	gi|118576019|ref|YP_875762.1|	-	0.047	13.2	0.0	1.7	8.1	0.0	2.2	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
RE_TdeIII	PF09520.5	gi|118576020|ref|YP_875763.1|	-	1.1e-94	316.4	0.0	1.2e-94	316.2	0.0	1.0	1	0	0	1	1	1	1	Type	II	restriction	endonuclease,	TdeIII
eIF-5_eIF-2B	PF01873.12	gi|118576022|ref|YP_875765.1|	-	9e-27	93.2	0.0	1.1e-26	92.9	0.0	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
Lar_restr_allev	PF14354.1	gi|118576022|ref|YP_875765.1|	-	0.0015	18.8	0.5	0.0024	18.1	0.3	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|118576022|ref|YP_875765.1|	-	0.016	15.1	0.7	0.57	10.1	0.0	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
Elf1	PF05129.8	gi|118576022|ref|YP_875765.1|	-	0.023	14.3	0.1	0.039	13.6	0.1	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
TF_Zn_Ribbon	PF08271.7	gi|118576022|ref|YP_875765.1|	-	0.065	12.5	0.8	0.13	11.5	0.5	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
GATA	PF00320.22	gi|118576022|ref|YP_875765.1|	-	0.066	12.5	0.9	0.15	11.4	0.6	1.6	1	0	0	1	1	1	0	GATA	zinc	finger
DZR	PF12773.2	gi|118576022|ref|YP_875765.1|	-	0.071	12.9	1.2	0.14	11.9	0.8	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2387	PF09526.5	gi|118576022|ref|YP_875765.1|	-	0.084	12.7	0.1	0.16	11.9	0.1	1.4	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zf-ISL3	PF14690.1	gi|118576022|ref|YP_875765.1|	-	0.13	12.2	0.5	1.1	9.3	0.3	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Cys_rich_KTR	PF14205.1	gi|118576022|ref|YP_875765.1|	-	0.19	11.2	1.2	17	4.9	0.0	2.6	3	0	0	3	3	3	0	Cysteine-rich	KTR
OrfB_Zn_ribbon	PF07282.6	gi|118576022|ref|YP_875765.1|	-	0.34	10.6	1.5	1	9.0	0.6	2.0	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|118576022|ref|YP_875765.1|	-	0.77	9.0	4.6	8.9	5.6	3.3	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF424	PF04242.8	gi|118576023|ref|YP_875766.1|	-	3e-24	84.8	0.0	3.6e-24	84.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
Methyltransf_26	PF13659.1	gi|118576025|ref|YP_875768.1|	-	5.8e-09	36.0	0.0	1.3e-08	34.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|118576025|ref|YP_875768.1|	-	6.7e-09	35.5	0.0	7.6e-06	25.5	0.0	2.7	2	1	0	2	2	2	2	DNA	methylase
UPF0020	PF01170.13	gi|118576025|ref|YP_875768.1|	-	8.2e-06	25.5	0.0	0.011	15.2	0.0	2.4	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
Methyltransf_15	PF09445.5	gi|118576025|ref|YP_875768.1|	-	0.06	12.8	0.0	20	4.6	0.0	2.8	3	0	0	3	3	3	0	RNA	cap	guanine-N2	methyltransferase
AsnC_trans_reg	PF01037.16	gi|118576026|ref|YP_875769.1|	-	0.028	14.1	0.3	0.034	13.8	0.2	1.2	1	0	0	1	1	1	0	AsnC	family
DUF1703	PF08011.6	gi|118576026|ref|YP_875769.1|	-	0.048	13.3	0.1	0.052	13.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
bPH_3	PF14470.1	gi|118576026|ref|YP_875769.1|	-	0.11	12.7	0.2	0.13	12.5	0.1	1.1	1	0	0	1	1	1	0	Bacterial	PH	domain
AsnC_trans_reg	PF01037.16	gi|118576027|ref|YP_875770.1|	-	1.3e-05	24.8	0.1	1.3e-05	24.7	0.0	1.0	1	0	0	1	1	1	1	AsnC	family
ACT_4	PF13291.1	gi|118576027|ref|YP_875770.1|	-	0.11	12.8	0.0	0.12	12.6	0.0	1.1	1	0	0	1	1	1	0	ACT	domain
Glyoxalase_2	PF12681.2	gi|118576028|ref|YP_875771.1|	-	5.7e-16	59.0	0.0	7.4e-16	58.7	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|118576028|ref|YP_875771.1|	-	1.7e-10	40.9	0.0	3.6e-10	39.9	0.0	1.5	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_4	PF13669.1	gi|118576028|ref|YP_875771.1|	-	0.0018	18.2	0.0	0.098	12.6	0.0	2.2	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Guanylate_cyc	PF00211.15	gi|118576032|ref|YP_875775.1|	-	5.6e-20	71.4	0.0	8e-20	70.9	0.0	1.1	1	0	0	1	1	1	1	Adenylate	and	Guanylate	cyclase	catalytic	domain
MtrF	PF09472.5	gi|118576033|ref|YP_875776.1|	-	0.088	12.0	0.1	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
His_kinase	PF06580.8	gi|118576034|ref|YP_875777.1|	-	0.11	12.4	1.5	0.13	12.2	1.0	1.3	1	1	0	1	1	1	0	Histidine	kinase
SGL	PF08450.7	gi|118576036|ref|YP_875779.1|	-	2.5e-26	92.5	2.4	0.093	12.0	0.0	15.7	8	5	8	18	18	18	7	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576036|ref|YP_875779.1|	-	2.5e-25	89.2	0.1	0.0006	18.9	0.0	10.4	7	3	2	10	10	10	6	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576036|ref|YP_875779.1|	-	4.8e-14	52.1	0.0	3.6	7.6	0.0	10.7	13	0	0	13	13	12	4	Arylesterase
Str_synth	PF03088.11	gi|118576036|ref|YP_875779.1|	-	1.1e-07	31.7	0.0	20	5.2	0.0	12.0	17	1	0	17	17	16	0	Strictosidine	synthase
WD40	PF00400.27	gi|118576036|ref|YP_875779.1|	-	9.8e-05	22.0	8.0	64	3.6	0.0	10.8	11	0	0	11	11	11	0	WD	domain,	G-beta	repeat
Cytochrom_D1	PF02239.11	gi|118576036|ref|YP_875779.1|	-	0.012	13.9	5.4	3.7	5.7	0.1	4.1	4	0	0	4	4	4	0	Cytochrome	D1	heme	domain
NHL	PF01436.16	gi|118576036|ref|YP_875779.1|	-	0.041	13.8	18.4	66	3.7	0.1	11.1	13	0	0	13	13	13	0	NHL	repeat
SBP56	PF05694.6	gi|118576036|ref|YP_875779.1|	-	2.9	6.2	0.1	74	1.6	0.0	3.1	4	0	0	4	4	4	0	56kDa	selenium	binding	protein	(SBP56)
TFIIIC_delta	PF12657.2	gi|118576036|ref|YP_875779.1|	-	4	7.1	0.0	5.1e+02	0.2	0.0	4.1	6	0	0	6	6	6	0	Transcription	factor	IIIC	subunit	delta	N-term
DUF839	PF05787.8	gi|118576036|ref|YP_875779.1|	-	4.7	6.0	0.0	56	2.4	0.0	2.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF839)
ThaI	PF15514.1	gi|118576036|ref|YP_875779.1|	-	5.9	6.1	0.0	1.5e+02	1.5	0.0	2.9	4	0	0	4	4	4	0	Restriction	endonuclease	ThaI
PALP	PF00291.20	gi|118576037|ref|YP_875780.1|	-	9.7e-81	271.3	2.5	1.7e-80	270.5	1.4	1.5	2	0	0	2	2	2	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|118576037|ref|YP_875780.1|	-	0.0002	20.7	1.1	0.00076	18.9	0.1	2.3	2	0	0	2	2	2	1	ACT	domain
SGL	PF08450.7	gi|118576038|ref|YP_875781.1|	-	3.2e-26	92.1	24.7	3.4e-05	23.3	0.1	14.2	9	5	5	15	15	15	7	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576038|ref|YP_875781.1|	-	3.3e-25	88.9	5.5	2.5e-05	23.5	0.1	9.5	6	4	4	10	10	10	8	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576038|ref|YP_875781.1|	-	1.7e-14	53.5	0.2	2	8.4	0.0	12.1	15	0	0	15	15	15	3	Arylesterase
Str_synth	PF03088.11	gi|118576038|ref|YP_875781.1|	-	1.6e-09	37.6	0.0	29	4.7	0.0	12.0	16	0	0	16	16	16	0	Strictosidine	synthase
Kelch_6	PF13964.1	gi|118576038|ref|YP_875781.1|	-	0.037	14.2	1.1	9.2	6.6	0.0	5.3	6	0	0	6	6	6	0	Kelch	motif
SBP56	PF05694.6	gi|118576038|ref|YP_875781.1|	-	0.046	12.2	0.0	13	4.1	0.0	3.1	3	0	0	3	3	3	0	56kDa	selenium	binding	protein	(SBP56)
NHL	PF01436.16	gi|118576038|ref|YP_875781.1|	-	0.23	11.4	18.5	66	3.7	0.0	11.2	15	0	0	15	15	15	0	NHL	repeat
Lactonase	PF10282.4	gi|118576040|ref|YP_875783.1|	-	1e-22	80.6	5.8	9.1e-07	28.2	0.1	7.6	5	2	1	7	7	7	6	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118576040|ref|YP_875783.1|	-	3.2e-18	66.0	12.4	0.021	14.1	0.0	11.9	9	4	4	13	13	13	7	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|118576040|ref|YP_875783.1|	-	2.6e-07	30.5	0.0	22	5.1	0.0	9.8	14	0	0	14	14	14	1	Arylesterase
NHL	PF01436.16	gi|118576040|ref|YP_875783.1|	-	3.7e-06	26.6	0.6	0.86	9.6	0.0	6.9	7	0	0	7	7	7	1	NHL	repeat
Str_synth	PF03088.11	gi|118576040|ref|YP_875783.1|	-	4.5e-05	23.4	0.0	35	4.5	0.0	7.0	7	0	0	7	7	7	0	Strictosidine	synthase
ATP-grasp	PF02222.17	gi|118576041|ref|YP_875784.1|	-	7.1e-54	181.7	0.0	1e-53	181.2	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118576041|ref|YP_875784.1|	-	6.9e-12	45.4	0.0	1.1e-11	44.7	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118576041|ref|YP_875784.1|	-	3.2e-06	26.1	0.0	1.7e-05	23.7	0.0	1.8	2	0	0	2	2	2	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Dala_Dala_lig_C	PF07478.8	gi|118576041|ref|YP_875784.1|	-	0.0005	19.5	0.0	0.00078	18.8	0.0	1.2	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
2-Hacid_dh_C	PF02826.14	gi|118576041|ref|YP_875784.1|	-	0.063	12.4	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GARS_A	PF01071.14	gi|118576041|ref|YP_875784.1|	-	0.065	12.7	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
SGL	PF08450.7	gi|118576042|ref|YP_875785.1|	-	1.5e-23	83.4	1.4	0.033	13.5	0.0	12.2	11	2	1	13	13	13	7	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576042|ref|YP_875785.1|	-	2.7e-07	29.9	0.1	0.56	9.2	0.0	5.8	7	1	0	7	7	7	2	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576042|ref|YP_875785.1|	-	4e-06	26.7	0.0	34	4.5	0.0	9.6	13	0	0	13	13	13	0	Arylesterase
Str_synth	PF03088.11	gi|118576042|ref|YP_875785.1|	-	1e-05	25.4	0.0	28	4.8	0.0	6.6	7	0	0	7	7	7	0	Strictosidine	synthase
NHL	PF01436.16	gi|118576042|ref|YP_875785.1|	-	0.068	13.1	16.2	20	5.3	0.0	8.9	10	0	0	10	10	10	0	NHL	repeat
SBP56	PF05694.6	gi|118576042|ref|YP_875785.1|	-	0.17	10.3	0.0	9.4	4.5	0.0	3.2	3	1	1	4	4	4	0	56kDa	selenium	binding	protein	(SBP56)
DUF839	PF05787.8	gi|118576042|ref|YP_875785.1|	-	1.1	8.1	0.0	17	4.1	0.0	2.7	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF839)
DUF3232	PF11554.3	gi|118576042|ref|YP_875785.1|	-	2.3	8.1	0.0	5.8	6.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3232)
Peptidase_M8	PF01457.11	gi|118576042|ref|YP_875785.1|	-	4.2	5.5	0.0	6.4	5.0	0.0	1.1	1	0	0	1	1	1	0	Leishmanolysin
SGL	PF08450.7	gi|118576043|ref|YP_875786.1|	-	1.4e-41	142.5	10.8	0.19	11.1	0.0	24.6	19	9	5	25	25	25	10	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576043|ref|YP_875786.1|	-	1.1e-33	116.7	0.0	0.07	12.1	0.0	19.0	17	2	2	19	19	19	10	Lactonase,	7-bladed	beta-propeller
Str_synth	PF03088.11	gi|118576043|ref|YP_875786.1|	-	3.4e-13	49.4	0.0	0.24	11.4	0.0	14.1	19	0	0	19	19	19	1	Strictosidine	synthase
Arylesterase	PF01731.15	gi|118576043|ref|YP_875786.1|	-	1.1e-09	38.1	0.0	70	3.4	0.0	13.9	16	1	1	17	17	17	0	Arylesterase
NHL	PF01436.16	gi|118576043|ref|YP_875786.1|	-	0.00066	19.5	32.5	36	4.5	0.0	17.7	21	0	0	21	21	21	0	NHL	repeat
WD40	PF00400.27	gi|118576043|ref|YP_875786.1|	-	0.0026	17.5	16.2	10	6.1	0.0	12.1	14	0	0	14	14	14	1	WD	domain,	G-beta	repeat
DUF2686	PF10887.3	gi|118576043|ref|YP_875786.1|	-	0.51	9.0	0.0	0.93	8.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2686)
Phytase-like	PF13449.1	gi|118576043|ref|YP_875786.1|	-	1.3	8.1	2.1	68	2.5	0.1	3.8	3	0	0	3	3	3	0	Esterase-like	activity	of	phytase
Cytochrom_D1	PF02239.11	gi|118576043|ref|YP_875786.1|	-	6.1	5.0	2.5	81	1.3	0.0	3.8	4	0	0	4	4	4	0	Cytochrome	D1	heme	domain
Coatomer_WDAD	PF04053.9	gi|118576043|ref|YP_875786.1|	-	6.4	5.4	0.0	31	3.1	0.0	2.0	2	0	0	2	2	2	0	Coatomer	WD	associated	region
Str_synth	PF03088.11	gi|118576044|ref|YP_875787.1|	-	0.26	11.3	0.0	18	5.4	0.0	3.2	2	1	1	3	3	3	0	Strictosidine	synthase
COX15-CtaA	PF02628.10	gi|118576045|ref|YP_875788.1|	-	0.041	12.7	1.0	0.06	12.2	0.7	1.4	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
DUF4401	PF14351.1	gi|118576045|ref|YP_875788.1|	-	0.64	8.9	6.2	0.047	12.6	1.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4401)
DUF4418	PF14387.1	gi|118576045|ref|YP_875788.1|	-	1.1	8.9	4.0	3.8	7.2	2.8	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4418)
SNARE_assoc	PF09335.6	gi|118576046|ref|YP_875789.1|	-	2e-18	66.7	6.9	2e-18	66.7	4.8	1.8	1	1	1	2	2	2	1	SNARE	associated	Golgi	protein
NTP_transferase	PF00483.18	gi|118576047|ref|YP_875790.1|	-	2.9e-27	95.5	0.0	6e-27	94.5	0.0	1.5	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|118576047|ref|YP_875790.1|	-	1.7e-13	50.9	0.1	2.6e-13	50.3	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|118576047|ref|YP_875790.1|	-	0.0096	15.4	0.0	0.014	14.8	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
PIN	PF01850.16	gi|118576050|ref|YP_875793.1|	-	0.0023	18.2	0.7	0.023	15.0	0.5	2.1	1	1	0	1	1	1	1	PIN	domain
Ribosomal_L3	PF00297.17	gi|118576052|ref|YP_875795.1|	-	9.3e-53	179.2	0.2	1.1e-52	179.0	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
Ribosomal_L4	PF00573.17	gi|118576053|ref|YP_875796.1|	-	6.8e-40	136.5	0.0	7.9e-40	136.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
ETRAMP	PF09716.5	gi|118576053|ref|YP_875796.1|	-	0.033	14.1	0.0	0.055	13.4	0.0	1.4	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Ribosomal_L23	PF00276.15	gi|118576054|ref|YP_875797.1|	-	1.6e-08	34.4	0.1	1.9e-08	34.1	0.1	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L23
RRM_5	PF13893.1	gi|118576054|ref|YP_875797.1|	-	0.037	13.8	0.5	0.29	11.0	0.0	2.1	2	0	0	2	2	2	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
Ribosomal_S19	PF00203.16	gi|118576055|ref|YP_875798.1|	-	4.9e-24	83.7	0.2	6.4e-24	83.3	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L22	PF00237.14	gi|118576056|ref|YP_875799.1|	-	7.7e-31	106.1	0.3	9e-31	105.9	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
KH_2	PF07650.12	gi|118576057|ref|YP_875800.1|	-	1.6e-15	56.4	0.5	1.6e-15	56.4	0.3	2.1	2	0	0	2	2	2	1	KH	domain
Ribosomal_S3_C	PF00189.15	gi|118576057|ref|YP_875800.1|	-	2.9e-14	53.0	0.3	9e-14	51.4	0.1	1.8	2	0	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_4	PF13083.1	gi|118576057|ref|YP_875800.1|	-	0.094	12.3	2.4	0.18	11.4	0.1	2.4	3	0	0	3	3	3	0	KH	domain
KH_1	PF00013.24	gi|118576057|ref|YP_875800.1|	-	0.13	11.9	2.6	0.61	9.7	0.1	2.9	3	0	0	3	3	3	0	KH	domain
KH_3	PF13014.1	gi|118576057|ref|YP_875800.1|	-	4.5	7.0	7.5	0.61	9.8	0.7	2.8	3	1	0	3	3	3	0	KH	domain
Ribosomal_L29	PF00831.18	gi|118576058|ref|YP_875801.1|	-	1e-12	47.4	0.8	1.2e-12	47.2	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
SPATA19	PF15212.1	gi|118576058|ref|YP_875801.1|	-	0.14	12.2	0.6	0.26	11.3	0.1	1.6	1	1	1	2	2	2	0	Spermatogenesis-associated	protein	19,	mitochondrial
UPF0086	PF01868.11	gi|118576059|ref|YP_875802.1|	-	1.2e-14	53.7	0.0	5.5e-14	51.5	0.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_S17	PF00366.15	gi|118576060|ref|YP_875803.1|	-	5e-17	61.7	1.0	6.2e-17	61.4	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L14	PF00238.14	gi|118576061|ref|YP_875804.1|	-	1.4e-33	115.2	0.2	1.6e-33	115.0	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
KOW	PF00467.24	gi|118576062|ref|YP_875805.1|	-	0.0031	17.1	3.0	0.0075	15.9	2.1	1.7	1	0	0	1	1	1	1	KOW	motif
eIF-1a	PF01176.14	gi|118576062|ref|YP_875805.1|	-	0.021	14.2	0.2	0.042	13.2	0.1	1.5	1	0	0	1	1	1	0	Translation	initiation	factor	1A	/	IF-1
Methyltrans_RNA	PF04452.9	gi|118576062|ref|YP_875805.1|	-	0.04	13.0	0.1	0.055	12.5	0.1	1.2	1	0	0	1	1	1	0	RNA	methyltransferase
Ribosomal_S4e	PF00900.15	gi|118576063|ref|YP_875806.1|	-	1.1e-22	79.4	0.0	2.3e-22	78.4	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.7	gi|118576063|ref|YP_875806.1|	-	3.7e-13	49.0	2.9	6.9e-13	48.2	2.0	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.20	gi|118576063|ref|YP_875806.1|	-	0.0002	20.7	0.0	0.00049	19.4	0.0	1.7	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.24	gi|118576063|ref|YP_875806.1|	-	0.0014	18.2	0.0	0.0062	16.2	0.0	2.1	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L5_C	PF00673.16	gi|118576064|ref|YP_875807.1|	-	9.1e-21	73.4	0.0	1.3e-20	72.8	0.0	1.2	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|118576064|ref|YP_875807.1|	-	6.1e-10	38.7	0.0	1.2e-09	37.8	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S14	PF00253.16	gi|118576065|ref|YP_875808.1|	-	9.8e-16	56.8	4.8	1.2e-15	56.5	3.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-FPG_IleRS	PF06827.9	gi|118576065|ref|YP_875808.1|	-	0.32	10.6	3.0	0.55	9.9	2.1	1.5	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
FYVE	PF01363.16	gi|118576065|ref|YP_875808.1|	-	0.67	9.8	3.7	1.4	8.8	2.6	1.6	1	1	0	1	1	1	0	FYVE	zinc	finger
zf-dskA_traR	PF01258.12	gi|118576065|ref|YP_875808.1|	-	1.6	8.5	4.6	21	4.9	3.2	2.1	1	1	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Ribosomal_S8	PF00410.14	gi|118576066|ref|YP_875809.1|	-	2.5e-19	69.3	0.0	3.4e-19	68.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L6	PF00347.18	gi|118576067|ref|YP_875810.1|	-	2.6e-09	37.4	3.0	0.0013	19.1	0.1	2.3	2	1	0	2	2	2	2	Ribosomal	protein	L6
SBP_bac_3	PF00497.15	gi|118576069|ref|YP_875812.1|	-	1.3e-24	86.6	0.0	2e-24	86.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
DZR	PF12773.2	gi|118576070|ref|YP_875813.1|	-	0.0042	16.8	0.2	0.0055	16.4	0.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-IS66	PF13005.2	gi|118576070|ref|YP_875813.1|	-	0.0087	16.0	0.5	1.1	9.2	0.1	2.5	2	0	0	2	2	2	1	zinc-finger	binding	domain	of	transposase	IS66
zf-C2H2	PF00096.21	gi|118576070|ref|YP_875813.1|	-	0.021	15.1	0.9	0.66	10.4	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
C1_4	PF07975.7	gi|118576070|ref|YP_875813.1|	-	0.075	13.0	0.1	6.3	6.8	0.0	2.1	2	0	0	2	2	2	0	TFIIH	C1-like	domain
zf-LYAR	PF08790.6	gi|118576070|ref|YP_875813.1|	-	0.087	12.5	0.5	9.5	6.0	0.0	2.3	2	0	0	2	2	2	0	LYAR-type	C2HC	zinc	finger
DUF35_N	PF12172.3	gi|118576070|ref|YP_875813.1|	-	0.13	12.2	2.0	4.4	7.3	0.2	2.3	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-HYPF	PF07503.7	gi|118576070|ref|YP_875813.1|	-	0.2	11.0	2.2	7.6	6.0	0.1	2.4	2	0	0	2	2	2	0	HypF	finger
SGL	PF08450.7	gi|118576072|ref|YP_875815.1|	-	9.8e-19	67.6	11.5	0.26	10.6	0.0	13.6	6	5	5	14	14	14	8	SMP-30/Gluconolaconase/LRE-like	region
Cytochrom_D1	PF02239.11	gi|118576072|ref|YP_875815.1|	-	0.06	11.6	0.1	6.1	5.0	0.0	2.9	3	0	0	3	3	3	0	Cytochrome	D1	heme	domain
CRAL_TRIO_N	PF03765.10	gi|118576072|ref|YP_875815.1|	-	2.2	8.4	0.0	88	3.3	0.0	2.4	2	0	0	2	2	2	0	CRAL/TRIO,	N-terminal	domain
Abhydrolase_3	PF07859.8	gi|118576073|ref|YP_875816.1|	-	2.8e-12	46.6	0.0	4.5e-12	46.0	0.0	1.5	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|118576073|ref|YP_875816.1|	-	5.3e-06	25.4	0.6	0.0013	17.5	0.0	2.1	2	0	0	2	2	2	2	Carboxylesterase	family
Abhydrolase_5	PF12695.2	gi|118576073|ref|YP_875816.1|	-	1.3e-05	25.0	0.1	2e-05	24.3	0.0	1.6	2	0	0	2	2	2	1	Alpha/beta	hydrolase	family
AXE1	PF05448.7	gi|118576073|ref|YP_875816.1|	-	0.079	11.4	0.3	0.16	10.4	0.2	1.5	1	1	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_2	PF02230.11	gi|118576073|ref|YP_875816.1|	-	0.094	12.1	0.3	0.4	10.1	0.1	2.0	1	1	1	2	2	2	0	Phospholipase/Carboxylesterase
HTH_29	PF13551.1	gi|118576075|ref|YP_875818.1|	-	0.0029	17.7	0.3	0.053	13.6	0.0	2.1	1	1	1	2	2	2	1	Winged	helix-turn	helix
HTH_IclR	PF09339.5	gi|118576075|ref|YP_875818.1|	-	0.021	14.4	0.0	0.042	13.4	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|118576075|ref|YP_875818.1|	-	0.11	12.1	0.0	0.29	10.8	0.0	1.7	1	0	0	1	1	1	0	MarR	family
Pyridox_oxidase	PF01243.15	gi|118576077|ref|YP_875820.1|	-	7.9e-13	48.2	0.0	1e-12	47.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|118576077|ref|YP_875820.1|	-	0.0031	17.3	0.0	0.0049	16.7	0.0	1.4	1	1	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
HTH_20	PF12840.2	gi|118576078|ref|YP_875821.1|	-	1e-13	50.8	0.1	1.7e-13	50.1	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|118576078|ref|YP_875821.1|	-	1.7e-08	33.9	0.2	1.1e-07	31.3	0.1	2.2	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_12	PF08461.5	gi|118576078|ref|YP_875821.1|	-	0.00018	21.1	0.8	0.00033	20.3	0.5	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
FUR	PF01475.14	gi|118576078|ref|YP_875821.1|	-	0.0029	17.5	0.1	0.0053	16.6	0.0	1.4	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_24	PF13412.1	gi|118576078|ref|YP_875821.1|	-	0.062	12.6	0.2	0.4	10.1	0.1	2.1	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Replic_Relax	PF13814.1	gi|118576078|ref|YP_875821.1|	-	0.069	13.0	0.3	0.16	11.8	0.1	1.6	2	0	0	2	2	2	0	Replication-relaxation
PadR	PF03551.9	gi|118576078|ref|YP_875821.1|	-	0.099	12.4	0.3	0.2	11.4	0.2	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2513	PF10711.4	gi|118576078|ref|YP_875821.1|	-	0.1	12.7	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Penicillinase_R	PF03965.11	gi|118576078|ref|YP_875821.1|	-	0.13	12.4	0.6	0.25	11.4	0.0	1.7	2	0	0	2	2	2	0	Penicillinase	repressor
HTH_11	PF08279.7	gi|118576078|ref|YP_875821.1|	-	0.21	11.2	2.8	0.47	10.1	0.4	2.6	2	1	0	2	2	2	0	HTH	domain
SAICAR_synt	PF01259.13	gi|118576080|ref|YP_875823.1|	-	4.4e-60	202.8	0.0	5.4e-60	202.5	0.0	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
RAMPs	PF03787.10	gi|118576080|ref|YP_875823.1|	-	0.052	13.3	0.0	0.073	12.8	0.0	1.2	1	0	0	1	1	1	0	RAMP	superfamily
N6_N4_Mtase	PF01555.13	gi|118576081|ref|YP_875824.1|	-	5e-48	163.6	0.6	6e-48	163.3	0.4	1.1	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576081|ref|YP_875824.1|	-	3.1e-08	33.6	0.0	0.0084	16.1	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576081|ref|YP_875824.1|	-	0.0063	16.0	0.0	0.12	11.8	0.0	2.2	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|118576081|ref|YP_875824.1|	-	0.011	16.2	0.0	0.11	12.9	0.0	2.5	3	0	0	3	3	3	0	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|118576082|ref|YP_875825.1|	-	8.3e-54	182.5	0.2	9.4e-54	182.3	0.1	1.0	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576082|ref|YP_875825.1|	-	8e-05	22.6	0.4	0.0028	17.6	0.0	2.4	2	1	0	2	2	2	1	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|118576082|ref|YP_875825.1|	-	0.00014	21.4	0.5	0.0022	17.5	0.0	2.5	2	1	1	3	3	3	1	D12	class	N6	adenine-specific	DNA	methyltransferase
UPF0020	PF01170.13	gi|118576082|ref|YP_875825.1|	-	0.0091	15.5	0.0	0.5	9.9	0.0	2.4	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Cons_hypoth95	PF03602.10	gi|118576082|ref|YP_875825.1|	-	0.036	13.4	0.1	3.6	6.9	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
Met_10	PF02475.11	gi|118576082|ref|YP_875825.1|	-	0.046	13.3	0.0	0.086	12.4	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Av_adeno_fibre	PF06536.6	gi|118576082|ref|YP_875825.1|	-	0.087	12.5	0.1	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	Avian	adenovirus	fibre
Crystall_2	PF09076.5	gi|118576082|ref|YP_875825.1|	-	0.12	12.1	0.4	1.6	8.5	0.0	2.5	2	1	1	3	3	3	0	Beta/Gamma	crystallin
Tsp45I	PF06300.7	gi|118576084|ref|YP_875827.1|	-	9.1e-06	25.3	0.7	1.1e-05	25.0	0.5	1.2	1	0	0	1	1	1	1	Tsp45I	type	II	restriction	enzyme
SANTA	PF09133.5	gi|118576084|ref|YP_875827.1|	-	0.0029	17.5	0.2	0.86	9.6	0.0	2.3	2	0	0	2	2	2	2	SANTA	(SANT	Associated)
Glyco_hydro_17	PF00332.13	gi|118576084|ref|YP_875827.1|	-	0.0045	16.0	1.1	0.0058	15.7	0.5	1.3	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	17
N6_Mtase	PF02384.11	gi|118576085|ref|YP_875828.1|	-	0.032	13.2	0.3	0.22	10.5	0.0	2.1	2	0	0	2	2	2	0	N-6	DNA	Methylase
Flexi_CP_N	PF08358.5	gi|118576085|ref|YP_875828.1|	-	0.069	12.9	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	Carlavirus	coat
DUF427	PF04248.7	gi|118576088|ref|YP_875831.1|	-	2.7e-30	103.8	0.2	3.5e-30	103.5	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF427)
SGL	PF08450.7	gi|118576090|ref|YP_875833.1|	-	4.6e-51	173.5	34.9	0.043	13.1	0.0	35.2	27	8	12	40	40	40	13	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576090|ref|YP_875833.1|	-	4e-50	170.8	18.8	0.0013	17.9	0.0	28.4	25	7	3	31	31	31	10	Lactonase,	7-bladed	beta-propeller
Str_synth	PF03088.11	gi|118576090|ref|YP_875833.1|	-	5.7e-18	64.7	0.0	8	6.5	0.0	22.3	30	0	0	30	30	29	1	Strictosidine	synthase
Arylesterase	PF01731.15	gi|118576090|ref|YP_875833.1|	-	1.2e-14	54.0	0.4	1.6	8.7	0.0	16.6	21	0	0	21	21	20	2	Arylesterase
PD40	PF07676.7	gi|118576090|ref|YP_875833.1|	-	1.3e-06	27.9	55.9	0.33	10.6	0.0	24.0	28	0	0	28	28	27	1	WD40-like	Beta	Propeller	Repeat
WD40	PF00400.27	gi|118576090|ref|YP_875833.1|	-	0.00064	19.5	16.0	1.5	8.8	0.5	12.9	13	1	1	14	14	13	1	WD	domain,	G-beta	repeat
HTH_20	PF12840.2	gi|118576090|ref|YP_875833.1|	-	0.71	9.7	7.8	2.6e+02	1.5	0.0	6.6	8	0	0	8	8	8	0	Helix-turn-helix	domain
NADH_Oxid_Nqo15	PF11497.3	gi|118576090|ref|YP_875833.1|	-	1.2	8.8	2.7	1.9e+02	1.7	0.1	6.2	4	1	0	4	4	3	0	NADH-quinone	oxidoreductase	chain	15
DUF228	PF02989.9	gi|118576090|ref|YP_875833.1|	-	1.5	8.3	0.0	13	5.3	0.0	2.4	2	0	0	2	2	2	0	Lyme	disease	proteins	of	unknown	function
Peptidase_S9_N	PF02897.10	gi|118576090|ref|YP_875833.1|	-	1.5	7.2	0.0	24	3.3	0.0	2.6	2	0	0	2	2	2	0	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Glu_cyclase_2	PF05096.7	gi|118576090|ref|YP_875833.1|	-	1.7	7.5	0.0	1e+02	1.7	0.0	3.8	2	0	0	2	2	2	0	Glutamine	cyclotransferase
DUF839	PF05787.8	gi|118576090|ref|YP_875833.1|	-	8	5.2	0.2	2.3e+02	0.4	0.0	3.3	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF839)
TatC	PF00902.13	gi|118576092|ref|YP_875835.1|	-	1.8e-59	200.7	5.7	2.2e-59	200.4	4.0	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
DUF4396	PF14342.1	gi|118576092|ref|YP_875835.1|	-	8.1	6.5	10.0	29	4.7	4.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4396)
MttA_Hcf106	PF02416.11	gi|118576093|ref|YP_875836.1|	-	1.9e-09	36.4	4.0	3.5e-09	35.6	2.8	1.5	1	1	0	1	1	1	1	mttA/Hcf106	family
TrbC	PF04956.8	gi|118576093|ref|YP_875836.1|	-	0.16	11.9	1.6	0.2	11.7	1.1	1.2	1	0	0	1	1	1	0	TrbC/VIRB2	family
COX4_pro_2	PF07835.7	gi|118576093|ref|YP_875836.1|	-	0.81	9.7	2.7	1.3	9.0	1.9	1.3	1	0	0	1	1	1	0	Bacterial	aa3	type	cytochrome	c	oxidase	subunit	IV
Polyketide_cyc2	PF10604.4	gi|118576094|ref|YP_875837.1|	-	4.5e-06	26.8	0.0	4.9e-06	26.7	0.0	1.0	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc	PF03364.15	gi|118576094|ref|YP_875837.1|	-	0.066	13.2	0.0	0.072	13.0	0.0	1.1	1	0	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Flavoprotein	PF02441.14	gi|118576095|ref|YP_875838.1|	-	6.3e-24	84.0	0.2	9.6e-24	83.5	0.1	1.2	1	0	0	1	1	1	1	Flavoprotein
DUF4065	PF13274.1	gi|118576097|ref|YP_875840.1|	-	0.00026	21.6	2.7	0.00068	20.3	1.8	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
Phage_Mu_Gam	PF07352.7	gi|118576097|ref|YP_875840.1|	-	0.19	11.2	4.1	0.34	10.4	2.8	1.5	1	1	0	1	1	1	0	Bacteriophage	Mu	Gam	like	protein
Spo0A_C	PF08769.6	gi|118576097|ref|YP_875840.1|	-	0.32	10.8	3.4	2.1	8.2	1.0	2.2	1	1	1	2	2	2	0	Sporulation	initiation	factor	Spo0A	C	terminal
DUF1297	PF06973.7	gi|118576100|ref|YP_875843.1|	-	1.6e-73	246.0	0.0	2.2e-73	245.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|118576100|ref|YP_875843.1|	-	1e-42	144.7	0.0	2.1e-42	143.8	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
DNase-RNase	PF02577.9	gi|118576101|ref|YP_875844.1|	-	4.7e-07	29.1	0.0	5.2e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	Bifunctional	nuclease
TrkH	PF02386.11	gi|118576102|ref|YP_875845.1|	-	1.4e-20	73.1	33.3	3.7e-19	68.5	13.3	3.5	1	1	2	3	3	3	2	Cation	transport	protein
CBS	PF00571.23	gi|118576102|ref|YP_875845.1|	-	1.9e-19	69.1	2.7	5.2e-12	45.3	0.1	2.4	2	0	0	2	2	2	2	CBS	domain
Herpes_glycop	PF01528.11	gi|118576103|ref|YP_875846.1|	-	4.9	5.7	10.1	0.043	12.4	0.5	2.0	2	0	0	2	2	2	0	Herpesvirus	glycoprotein	M
7tm_7	PF08395.7	gi|118576104|ref|YP_875847.1|	-	0.018	14.1	1.1	0.02	13.9	0.8	1.0	1	0	0	1	1	1	0	7tm	Chemosensory	receptor
VKOR	PF07884.9	gi|118576104|ref|YP_875847.1|	-	0.19	11.6	4.6	0.27	11.0	3.2	1.2	1	0	0	1	1	1	0	Vitamin	K	epoxide	reductase	family
TM2	PF05154.11	gi|118576104|ref|YP_875847.1|	-	0.93	9.7	24.7	0.083	13.1	8.3	3.8	3	1	0	3	3	3	0	TM2	domain
DUF4131	PF13567.1	gi|118576104|ref|YP_875847.1|	-	2.9	7.2	5.5	2.6	7.4	3.3	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Syntaphilin	PF15290.1	gi|118576106|ref|YP_875849.1|	-	0.24	10.8	6.7	0.29	10.5	4.6	1.0	1	0	0	1	1	1	0	Golgi-localised	syntaxin-1-binding	clamp
Med12-LCEWAV	PF12145.3	gi|118576106|ref|YP_875849.1|	-	8.8	4.6	9.8	12	4.2	6.8	1.3	1	0	0	1	1	1	0	Eukaryotic	Mediator	12	subunit	domain
GTP_EFTU	PF00009.22	gi|118576108|ref|YP_875851.1|	-	1.1e-56	191.2	0.4	1.8e-56	190.5	0.3	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|118576108|ref|YP_875851.1|	-	8e-29	99.6	0.0	3.4e-28	97.6	0.0	2.1	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|118576108|ref|YP_875851.1|	-	7.2e-21	73.8	0.5	1.6e-20	72.6	0.4	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|118576108|ref|YP_875851.1|	-	6.1e-20	70.8	0.0	2.1e-19	69.1	0.0	2.0	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|118576108|ref|YP_875851.1|	-	1.3e-13	50.8	0.1	4.8e-13	49.0	0.1	2.1	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
T4SS-DNA_transf	PF02534.9	gi|118576108|ref|YP_875851.1|	-	0.043	12.3	0.0	0.11	11.0	0.0	1.6	2	0	0	2	2	2	0	Type	IV	secretory	system	Conjugative	DNA	transfer
SIS	PF01380.17	gi|118576109|ref|YP_875852.1|	-	4.7e-08	32.7	1.0	2.2e-05	24.0	0.0	3.0	2	1	0	2	2	2	2	SIS	domain
SGL	PF08450.7	gi|118576110|ref|YP_875853.1|	-	2e-43	148.5	14.3	0.0067	15.8	0.1	26.1	12	6	7	25	25	25	11	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576110|ref|YP_875853.1|	-	1.7e-27	96.4	6.9	0.0033	16.5	0.0	15.0	12	4	3	15	15	15	6	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576110|ref|YP_875853.1|	-	7.6e-23	80.2	0.0	0.63	10.0	0.0	15.8	18	0	0	18	18	18	4	Arylesterase
Str_synth	PF03088.11	gi|118576110|ref|YP_875853.1|	-	4.4e-09	36.2	0.0	3.4	7.7	0.0	12.4	15	0	0	15	15	14	1	Strictosidine	synthase
Phytase-like	PF13449.1	gi|118576110|ref|YP_875853.1|	-	7.5e-05	22.1	0.1	8.8	5.4	0.1	6.2	6	0	0	6	6	6	1	Esterase-like	activity	of	phytase
Glu_cyclase_2	PF05096.7	gi|118576110|ref|YP_875853.1|	-	0.0024	16.9	0.0	85	2.0	0.0	7.4	9	0	0	9	9	9	0	Glutamine	cyclotransferase
ThaI	PF15514.1	gi|118576110|ref|YP_875853.1|	-	0.015	14.5	0.0	15	4.7	0.0	5.1	7	0	0	7	7	7	0	Restriction	endonuclease	ThaI
DUF1513	PF07433.6	gi|118576110|ref|YP_875853.1|	-	0.038	12.8	0.0	3.6	6.3	0.0	3.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1513)
DPPIV_N	PF00930.16	gi|118576110|ref|YP_875853.1|	-	0.12	10.9	0.0	7.1	5.1	0.0	3.2	3	0	0	3	3	3	0	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
TFIIIC_delta	PF12657.2	gi|118576110|ref|YP_875853.1|	-	0.2	11.3	0.0	1.6e+02	1.9	0.0	6.2	9	0	0	9	9	9	0	Transcription	factor	IIIC	subunit	delta	N-term
SBP56	PF05694.6	gi|118576110|ref|YP_875853.1|	-	1.2	7.5	0.1	2.3e+02	-0.0	0.0	4.4	5	0	0	5	5	5	0	56kDa	selenium	binding	protein	(SBP56)
DUF228	PF02989.9	gi|118576110|ref|YP_875853.1|	-	2.1	7.8	0.0	1.4e+02	1.9	0.0	3.6	4	1	1	5	5	5	0	Lyme	disease	proteins	of	unknown	function
VitK2_biosynth	PF02621.9	gi|118576112|ref|YP_875855.1|	-	1.3e-65	221.1	0.0	1.4e-65	220.9	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
Phosphonate-bd	PF12974.2	gi|118576112|ref|YP_875855.1|	-	0.039	13.3	0.0	0.061	12.6	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
Usp	PF00582.21	gi|118576113|ref|YP_875856.1|	-	2e-29	102.5	0.0	2.4e-29	102.3	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Form-deh_trans	PF09163.6	gi|118576114|ref|YP_875857.1|	-	0.12	11.8	0.0	0.23	10.9	0.0	1.4	1	0	0	1	1	1	0	Formate	dehydrogenase	N,	transmembrane
EMA	PF02488.10	gi|118576117|ref|YP_875860.1|	-	0.023	14.1	0.0	0.026	13.9	0.0	1.0	1	0	0	1	1	1	0	Merozoite	Antigen
Vps5	PF09325.5	gi|118576117|ref|YP_875860.1|	-	0.025	13.8	0.8	0.029	13.6	0.5	1.3	1	1	0	1	1	1	0	Vps5	C	terminal	like
IL2	PF00715.12	gi|118576117|ref|YP_875860.1|	-	0.1	12.2	0.1	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Interleukin	2
DUF4446	PF14584.1	gi|118576117|ref|YP_875860.1|	-	0.56	10.0	2.8	2.9	7.6	2.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
DnaJ	PF00226.26	gi|118576118|ref|YP_875861.1|	-	7.9e-13	47.9	0.1	1.9e-12	46.7	0.1	1.6	1	0	0	1	1	1	1	DnaJ	domain
DUF342	PF03961.8	gi|118576118|ref|YP_875861.1|	-	0.0013	17.2	0.2	1.1	7.6	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF342)
DUF2345	PF10106.4	gi|118576118|ref|YP_875861.1|	-	0.019	14.6	0.0	0.034	13.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
HAMP	PF00672.20	gi|118576119|ref|YP_875862.1|	-	1.8e-16	60.0	0.6	9.2e-16	57.7	0.1	2.3	2	0	0	2	2	2	1	HAMP	domain
Guanylate_cyc	PF00211.15	gi|118576119|ref|YP_875862.1|	-	4.7e-14	52.1	0.0	1e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	Adenylate	and	Guanylate	cyclase	catalytic	domain
RimK	PF08443.6	gi|118576120|ref|YP_875863.1|	-	1.9e-39	135.1	0.0	2.5e-39	134.7	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|118576120|ref|YP_875863.1|	-	1.2e-14	54.4	0.0	2.6e-14	53.3	0.0	1.5	1	1	1	2	2	2	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|118576120|ref|YP_875863.1|	-	2.6e-10	39.7	0.0	3.4e-10	39.3	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118576120|ref|YP_875863.1|	-	1.3e-08	33.9	0.0	3e-08	32.7	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|118576120|ref|YP_875863.1|	-	2.1e-07	30.9	0.0	6.1e-07	29.4	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|118576120|ref|YP_875863.1|	-	2.2e-05	23.8	0.0	0.00013	21.4	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|118576120|ref|YP_875863.1|	-	7.2e-05	22.1	0.0	0.00015	21.0	0.0	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|118576120|ref|YP_875863.1|	-	0.0099	15.2	0.0	1.4	8.2	0.0	2.2	2	0	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_5	PF13549.1	gi|118576120|ref|YP_875863.1|	-	0.048	12.8	0.0	0.097	11.8	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
ATPgrasp_YheCD	PF14398.1	gi|118576120|ref|YP_875863.1|	-	0.078	11.7	0.0	0.55	8.9	0.0	2.2	2	1	0	2	2	2	0	YheC/D	like	ATP-grasp
Arginosuc_synth	PF00764.14	gi|118576121|ref|YP_875864.1|	-	6.8e-145	482.9	0.0	7.8e-145	482.7	0.0	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
Asn_synthase	PF00733.16	gi|118576121|ref|YP_875864.1|	-	0.00012	21.6	0.0	0.00019	21.0	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|118576121|ref|YP_875864.1|	-	0.00023	20.4	0.0	0.00037	19.8	0.0	1.3	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|118576121|ref|YP_875864.1|	-	0.0012	18.3	0.1	0.002	17.6	0.1	1.4	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|118576121|ref|YP_875864.1|	-	0.0033	16.0	0.1	0.0046	15.5	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
NMT1_2	PF13379.1	gi|118576122|ref|YP_875865.1|	-	9.3e-24	84.1	0.0	1.2e-23	83.8	0.0	1.1	1	0	0	1	1	1	1	NMT1-like	family
NMT1	PF09084.6	gi|118576122|ref|YP_875865.1|	-	4.1e-09	36.3	0.0	5.4e-09	35.9	0.0	1.1	1	0	0	1	1	1	1	NMT1/THI5	like
Phosphonate-bd	PF12974.2	gi|118576122|ref|YP_875865.1|	-	0.0002	20.8	0.0	0.00043	19.7	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
ABC_tran	PF00005.22	gi|118576123|ref|YP_875866.1|	-	2.7e-27	95.7	0.0	4.4e-27	95.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576123|ref|YP_875866.1|	-	9.9e-12	45.4	0.0	3.3e-05	23.9	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|118576123|ref|YP_875866.1|	-	5.4e-06	26.5	0.2	1.4e-05	25.2	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|118576123|ref|YP_875866.1|	-	7.5e-05	21.9	0.0	0.0024	16.9	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|118576123|ref|YP_875866.1|	-	0.0002	22.1	0.0	0.00079	20.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|118576123|ref|YP_875866.1|	-	0.00025	21.2	0.1	0.0045	17.1	0.1	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|118576123|ref|YP_875866.1|	-	0.001	19.2	0.1	0.014	15.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|118576123|ref|YP_875866.1|	-	0.0022	17.2	0.0	0.0036	16.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|118576123|ref|YP_875866.1|	-	0.0034	16.1	0.0	0.0046	15.6	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
SMC_N	PF02463.14	gi|118576123|ref|YP_875866.1|	-	0.0035	16.5	0.2	0.65	9.1	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|118576123|ref|YP_875866.1|	-	0.0038	16.6	0.1	0.022	14.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|118576123|ref|YP_875866.1|	-	0.0067	16.0	0.2	0.25	10.8	0.0	2.6	2	1	1	3	3	3	1	AAA	domain
Arch_ATPase	PF01637.13	gi|118576123|ref|YP_875866.1|	-	0.0074	16.0	0.0	0.15	11.7	0.0	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_33	PF13671.1	gi|118576123|ref|YP_875866.1|	-	0.011	15.5	0.0	0.026	14.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|118576123|ref|YP_875866.1|	-	0.013	15.0	0.0	0.027	13.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|118576123|ref|YP_875866.1|	-	0.014	15.0	0.1	0.03	13.9	0.0	1.5	2	0	0	2	2	1	0	NACHT	domain
AAA_18	PF13238.1	gi|118576123|ref|YP_875866.1|	-	0.026	14.8	0.0	0.048	13.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|118576123|ref|YP_875866.1|	-	0.03	14.6	0.0	0.047	14.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|118576123|ref|YP_875866.1|	-	0.032	14.3	0.0	0.088	12.9	0.0	1.7	2	0	0	2	2	1	0	RNA	helicase
AAA_10	PF12846.2	gi|118576123|ref|YP_875866.1|	-	0.036	13.5	0.1	0.17	11.2	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_5	PF07728.9	gi|118576123|ref|YP_875866.1|	-	0.038	13.7	0.0	0.13	11.9	0.0	1.8	2	1	1	3	3	3	0	AAA	domain	(dynein-related	subfamily)
ABC_ATPase	PF09818.4	gi|118576123|ref|YP_875866.1|	-	0.042	12.4	0.1	0.46	9.0	0.0	1.9	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_28	PF13521.1	gi|118576123|ref|YP_875866.1|	-	0.044	13.7	0.1	0.14	12.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|118576123|ref|YP_875866.1|	-	0.064	12.7	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|118576123|ref|YP_875866.1|	-	0.069	13.0	0.0	0.23	11.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|118576123|ref|YP_875866.1|	-	0.075	12.9	0.0	0.21	11.5	0.0	1.7	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|118576123|ref|YP_875866.1|	-	0.088	13.3	0.1	0.21	12.1	0.0	1.6	2	0	0	2	2	1	0	Miro-like	protein
SbcCD_C	PF13558.1	gi|118576123|ref|YP_875866.1|	-	0.15	11.9	0.1	0.27	11.1	0.1	1.4	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
BPD_transp_1	PF00528.17	gi|118576124|ref|YP_875867.1|	-	3.6e-23	82.0	12.6	5.3e-23	81.4	8.7	1.2	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
MFS_1	PF07690.11	gi|118576125|ref|YP_875868.1|	-	1.4e-26	93.0	66.0	6.5e-23	81.0	22.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|118576125|ref|YP_875868.1|	-	0.053	13.3	4.7	1.1	9.1	0.2	3.4	3	0	0	3	3	3	0	MFS_1	like	family
Methyltransf_11	PF08241.7	gi|118576126|ref|YP_875869.1|	-	4e-08	33.6	0.0	7.8e-08	32.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118576126|ref|YP_875869.1|	-	3e-05	23.8	0.0	6.6e-05	22.6	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118576126|ref|YP_875869.1|	-	0.014	15.8	0.0	0.031	14.7	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|118576126|ref|YP_875869.1|	-	0.029	14.0	0.0	0.046	13.3	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	methyltransferase
Methyltransf_31	PF13847.1	gi|118576126|ref|YP_875869.1|	-	0.11	12.0	0.0	14	5.2	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
S-methyl_trans	PF02574.11	gi|118576127|ref|YP_875870.1|	-	1.1e-65	221.9	0.0	1.3e-65	221.7	0.0	1.0	1	0	0	1	1	1	1	Homocysteine	S-methyltransferase
Pterin_bind	PF00809.17	gi|118576128|ref|YP_875871.1|	-	6.3e-24	84.5	0.0	9.4e-24	83.9	0.0	1.3	1	0	0	1	1	1	1	Pterin	binding	enzyme
Met_synt_B12	PF02965.12	gi|118576128|ref|YP_875871.1|	-	4.6e-17	61.9	0.0	7.5e-17	61.2	0.0	1.4	1	0	0	1	1	1	1	Vitamin	B12	dependent	methionine	synthase,	activation	domain
B12-binding	PF02310.14	gi|118576128|ref|YP_875871.1|	-	1.5e-16	60.3	0.0	3.7e-16	59.0	0.0	1.7	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.12	gi|118576128|ref|YP_875871.1|	-	3.1e-15	55.9	0.0	3.7e-14	52.4	0.0	2.3	2	0	0	2	2	2	1	B12	binding	domain
CdhD	PF03599.11	gi|118576128|ref|YP_875871.1|	-	1e-05	24.2	0.0	2.3e-05	23.0	0.0	1.5	1	0	0	1	1	1	1	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
CDC37_N	PF03234.9	gi|118576128|ref|YP_875871.1|	-	0.15	12.3	0.1	0.28	11.4	0.1	1.3	1	0	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
MTHFR	PF02219.12	gi|118576129|ref|YP_875872.1|	-	0.0029	16.7	0.0	0.0075	15.3	0.0	1.6	2	0	0	2	2	2	1	Methylenetetrahydrofolate	reductase
Peripla_BP_6	PF13458.1	gi|118576129|ref|YP_875872.1|	-	0.049	12.9	0.2	0.084	12.2	0.1	1.3	1	0	0	1	1	1	0	Periplasmic	binding	protein
Glyco_tran_WecB	PF03808.8	gi|118576129|ref|YP_875872.1|	-	0.059	12.7	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	WecB/TagA/CpsF	family
NUDIX	PF00293.23	gi|118576130|ref|YP_875873.1|	-	2.7e-11	43.2	0.0	3.8e-11	42.7	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
DBC1	PF14443.1	gi|118576130|ref|YP_875873.1|	-	0.091	12.2	0.0	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	DBC1
Ribosomal_L39	PF00832.15	gi|118576131|ref|YP_875874.1|	-	1.8e-19	68.9	6.9	2e-19	68.7	4.8	1.0	1	0	0	1	1	1	1	Ribosomal	L39	protein
Ribosomal_L31e	PF01198.14	gi|118576132|ref|YP_875875.1|	-	2.6e-22	78.2	0.4	4.5e-22	77.5	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L31e
Trypan_PARP	PF05887.6	gi|118576132|ref|YP_875875.1|	-	0.34	10.7	36.7	0.75	9.6	14.3	2.1	1	1	1	2	2	2	0	Procyclic	acidic	repetitive	protein	(PARP)
Neisseria_TspB	PF05616.8	gi|118576132|ref|YP_875875.1|	-	7.8	4.7	23.6	6.8	4.9	15.1	1.6	1	1	0	1	1	1	0	Neisseria	meningitidis	TspB	protein
Med3	PF11593.3	gi|118576132|ref|YP_875875.1|	-	8.5	5.4	12.0	9.9	5.2	8.3	1.1	1	0	0	1	1	1	0	Mediator	complex	subunit	3	fungal
Tubulin	PF00091.20	gi|118576133|ref|YP_875876.1|	-	1.7e-11	44.3	0.2	3e-11	43.5	0.0	1.4	2	0	0	2	2	2	1	Tubulin/FtsZ	family,	GTPase	domain
KH_3	PF13014.1	gi|118576133|ref|YP_875876.1|	-	0.0082	15.7	0.0	0.028	14.0	0.0	1.9	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|118576133|ref|YP_875876.1|	-	0.1	12.2	0.0	0.24	11.0	0.0	1.7	1	0	0	1	1	1	0	KH	domain
UPF0004	PF00919.15	gi|118576134|ref|YP_875877.1|	-	3.2e-14	52.5	0.0	6.1e-14	51.6	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Radical_SAM	PF04055.16	gi|118576134|ref|YP_875877.1|	-	2.3e-12	47.3	0.0	4.5e-12	46.4	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
TRAM	PF01938.15	gi|118576134|ref|YP_875877.1|	-	0.00095	18.9	0.1	0.0045	16.7	0.1	2.2	1	0	0	1	1	1	1	TRAM	domain
Lyase_1	PF00206.15	gi|118576135|ref|YP_875878.1|	-	1.5e-83	280.6	0.0	1.8e-83	280.3	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|118576135|ref|YP_875878.1|	-	8.7e-12	44.9	0.0	3e-11	43.1	0.0	2.0	2	0	0	2	2	2	1	Fumarase	C	C-terminus
2-Hacid_dh_C	PF02826.14	gi|118576136|ref|YP_875879.1|	-	3.3e-60	202.2	0.0	4.6e-60	201.8	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|118576136|ref|YP_875879.1|	-	1.3e-25	89.3	0.0	1.5e-25	89.2	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|118576136|ref|YP_875879.1|	-	0.027	14.2	0.1	0.077	12.8	0.0	1.8	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
CutA1	PF03091.10	gi|118576140|ref|YP_875883.1|	-	0.041	13.5	0.4	0.072	12.7	0.3	1.4	1	1	0	1	1	1	0	CutA1	divalent	ion	tolerance	protein
Ribosomal_L15e	PF00827.12	gi|118576142|ref|YP_875885.1|	-	2.1e-45	154.5	3.2	2.7e-45	154.2	2.2	1.0	1	0	0	1	1	1	1	Ribosomal	L15
SGL	PF08450.7	gi|118576144|ref|YP_875887.1|	-	1.9e-13	50.3	2.5	0.6	9.4	0.0	9.0	7	2	3	10	10	10	4	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576144|ref|YP_875887.1|	-	1.1e-06	28.0	0.2	1.6	7.7	0.0	5.4	5	1	0	6	6	6	4	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576144|ref|YP_875887.1|	-	0.00014	21.7	0.0	0.26	11.2	0.0	5.5	6	0	0	6	6	6	1	Arylesterase
Redoxin	PF08534.5	gi|118576145|ref|YP_875888.1|	-	2.1e-07	30.5	0.0	0.00046	19.7	0.0	2.1	2	0	0	2	2	2	2	Redoxin
AhpC-TSA	PF00578.16	gi|118576145|ref|YP_875888.1|	-	9.2e-05	22.1	0.0	0.0022	17.6	0.0	2.3	2	1	0	2	2	2	1	AhpC/TSA	family
Thioredoxin_2	PF13098.1	gi|118576145|ref|YP_875888.1|	-	0.034	14.3	0.0	0.31	11.2	0.0	2.1	1	1	0	1	1	1	0	Thioredoxin-like	domain
HEAT_2	PF13646.1	gi|118576147|ref|YP_875890.1|	-	4.3e-25	87.8	0.1	2.9e-19	69.1	0.0	2.1	1	1	1	2	2	2	2	HEAT	repeats
HEAT	PF02985.17	gi|118576147|ref|YP_875890.1|	-	3.3e-13	48.5	0.0	0.031	14.3	0.0	4.1	4	0	0	4	4	4	4	HEAT	repeat
HEAT_PBS	PF03130.11	gi|118576147|ref|YP_875890.1|	-	1.7e-12	46.5	0.0	0.00027	21.1	0.0	3.4	4	0	0	4	4	4	2	PBS	lyase	HEAT-like	repeat
HEAT_EZ	PF13513.1	gi|118576147|ref|YP_875890.1|	-	8.6e-11	41.9	0.1	0.059	13.8	0.0	3.9	4	0	0	4	4	4	3	HEAT-like	repeat
Arm	PF00514.18	gi|118576147|ref|YP_875890.1|	-	0.0001	21.9	0.0	0.68	9.8	0.0	3.3	4	0	0	4	4	4	2	Armadillo/beta-catenin-like	repeat
Adaptin_N	PF01602.15	gi|118576147|ref|YP_875890.1|	-	0.00024	19.5	0.0	0.0007	18.0	0.0	1.6	1	1	1	2	2	2	1	Adaptin	N	terminal	region
SMC_N	PF02463.14	gi|118576148|ref|YP_875891.1|	-	4.4e-06	26.1	0.0	4.7e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|118576148|ref|YP_875891.1|	-	1.1e-05	25.2	1.8	1.9e-05	24.4	0.0	2.4	3	0	0	3	3	3	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|118576148|ref|YP_875891.1|	-	0.0059	15.1	3.5	0.17	10.2	0.0	3.6	4	0	0	4	4	4	1	AAA	domain
AAA_21	PF13304.1	gi|118576148|ref|YP_875891.1|	-	0.0065	16.4	0.0	0.011	15.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
FANCL_C	PF11793.3	gi|118576148|ref|YP_875891.1|	-	0.068	13.1	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	FANCL	C-terminal	domain
Metallophos	PF00149.23	gi|118576149|ref|YP_875892.1|	-	6.4e-16	58.3	0.2	1.8e-15	56.8	0.1	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|118576149|ref|YP_875892.1|	-	1.8e-13	50.6	0.0	2.8e-13	49.9	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF87	PF01935.12	gi|118576150|ref|YP_875893.1|	-	2.9e-25	89.4	0.0	5e-25	88.6	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|118576150|ref|YP_875893.1|	-	6.2e-17	61.9	0.0	9.1e-16	58.1	0.0	2.0	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|118576150|ref|YP_875893.1|	-	0.066	12.6	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DRTGG	PF07085.7	gi|118576150|ref|YP_875893.1|	-	0.11	12.1	0.4	0.27	10.8	0.1	1.9	2	0	0	2	2	2	0	DRTGG	domain
NurA	PF09376.5	gi|118576151|ref|YP_875894.1|	-	1.3e-06	28.1	0.0	5.3e-06	26.0	0.0	1.9	1	1	0	1	1	1	1	NurA	domain
DUF108	PF01958.13	gi|118576152|ref|YP_875895.1|	-	1.7e-31	108.2	0.1	3.5e-31	107.2	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.11	gi|118576152|ref|YP_875895.1|	-	2.6e-16	60.0	0.4	5.3e-16	59.0	0.1	1.6	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|118576152|ref|YP_875895.1|	-	0.00013	21.8	0.0	0.00021	21.1	0.0	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
F420_oxidored	PF03807.12	gi|118576152|ref|YP_875895.1|	-	0.002	18.5	0.3	0.0042	17.4	0.2	1.5	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|118576152|ref|YP_875895.1|	-	0.0041	17.6	0.0	0.0082	16.6	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_2	PF03446.10	gi|118576152|ref|YP_875895.1|	-	0.0067	16.2	0.1	0.021	14.6	0.0	1.8	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|118576152|ref|YP_875895.1|	-	0.012	15.3	0.2	0.02	14.5	0.1	1.5	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|118576152|ref|YP_875895.1|	-	0.069	12.2	0.0	0.097	11.8	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ADH_N_assoc	PF13823.1	gi|118576152|ref|YP_875895.1|	-	2.3	7.9	4.7	0.81	9.4	0.8	2.0	2	0	0	2	2	2	0	Alcohol	dehydrogenase	GroES-associated
NadA	PF02445.11	gi|118576153|ref|YP_875896.1|	-	4.8e-112	373.5	0.0	5.4e-112	373.3	0.0	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
QRPTase_C	PF01729.14	gi|118576154|ref|YP_875897.1|	-	4.2e-52	176.0	0.5	5.4e-52	175.7	0.3	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|118576154|ref|YP_875897.1|	-	1.9e-20	72.4	0.1	4.4e-20	71.2	0.0	1.6	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribul_P_3_epim	PF00834.14	gi|118576154|ref|YP_875897.1|	-	0.008	15.3	0.0	0.014	14.5	0.0	1.3	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
Methyltransf_30	PF05430.6	gi|118576154|ref|YP_875897.1|	-	0.019	14.6	0.0	0.038	13.6	0.0	1.4	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
Spt4	PF06093.8	gi|118576155|ref|YP_875898.1|	-	1.9e-13	50.0	0.4	2.4e-13	49.7	0.3	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Laminin_EGF	PF00053.19	gi|118576155|ref|YP_875898.1|	-	0.01	15.7	0.7	0.014	15.3	0.5	1.2	1	0	0	1	1	1	0	Laminin	EGF-like	(Domains	III	and	V)
RecR	PF02132.10	gi|118576155|ref|YP_875898.1|	-	0.068	12.6	0.9	0.088	12.2	0.6	1.2	1	0	0	1	1	1	0	RecR	protein
DZR	PF12773.2	gi|118576155|ref|YP_875898.1|	-	0.12	12.1	2.7	0.47	10.3	1.9	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.11	gi|118576155|ref|YP_875898.1|	-	0.66	9.7	6.0	0.41	10.3	0.6	2.2	1	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-ribbon_3	PF13248.1	gi|118576155|ref|YP_875898.1|	-	0.7	9.1	4.5	1.9	7.8	0.4	1.8	1	1	1	2	2	2	0	zinc-ribbon	domain
SHS2_Rpb7-N	PF03876.12	gi|118576156|ref|YP_875899.1|	-	2.2e-15	56.5	0.0	6.8e-15	54.9	0.0	1.8	2	0	0	2	2	2	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|118576156|ref|YP_875899.1|	-	2.7e-14	52.9	0.0	4.5e-14	52.3	0.0	1.3	1	0	0	1	1	1	1	S1	RNA	binding	domain
S1_2	PF13509.1	gi|118576156|ref|YP_875899.1|	-	0.035	14.0	0.0	0.059	13.3	0.0	1.4	1	0	0	1	1	1	0	S1	domain
BPL_C	PF02237.12	gi|118576156|ref|YP_875899.1|	-	0.04	13.5	0.1	0.11	12.2	0.0	1.7	1	0	0	1	1	1	0	Biotin	protein	ligase	C	terminal	domain
Chorion_1	PF01723.11	gi|118576156|ref|YP_875899.1|	-	0.062	13.1	0.1	0.098	12.5	0.1	1.3	1	0	0	1	1	1	0	Chorion	protein
ParA	PF10609.4	gi|118576158|ref|YP_875901.1|	-	2.2e-35	120.4	0.2	4.3e-35	119.4	0.2	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|118576158|ref|YP_875901.1|	-	1e-20	73.9	0.1	1.6e-20	73.3	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF59	PF01883.14	gi|118576158|ref|YP_875901.1|	-	9.9e-18	63.9	0.1	2.4e-17	62.6	0.1	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
AAA_31	PF13614.1	gi|118576158|ref|YP_875901.1|	-	3.7e-11	43.2	0.1	1.3e-10	41.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
MipZ	PF09140.6	gi|118576158|ref|YP_875901.1|	-	9.4e-08	31.4	0.0	1.5e-07	30.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.13	gi|118576158|ref|YP_875901.1|	-	2.9e-07	29.9	0.1	0.0026	17.0	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.1	gi|118576158|ref|YP_875901.1|	-	6.4e-05	22.6	1.4	0.021	14.4	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
ArsA_ATPase	PF02374.10	gi|118576158|ref|YP_875901.1|	-	0.002	17.2	1.6	0.002	17.2	1.1	1.9	2	0	0	2	2	2	1	Anion-transporting	ATPase
VirC1	PF07015.6	gi|118576158|ref|YP_875901.1|	-	0.0052	15.8	0.1	0.0088	15.1	0.0	1.3	1	0	0	1	1	1	1	VirC1	protein
AAA_25	PF13481.1	gi|118576158|ref|YP_875901.1|	-	0.022	14.1	0.6	0.047	13.0	0.4	1.5	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|118576158|ref|YP_875901.1|	-	0.04	12.6	0.6	0.065	12.0	0.4	1.2	1	0	0	1	1	1	0	ArgK	protein
APS_kinase	PF01583.15	gi|118576158|ref|YP_875901.1|	-	0.1	12.2	0.1	0.2	11.3	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
DUF359	PF04019.7	gi|118576159|ref|YP_875902.1|	-	7.7e-36	122.1	0.0	1.1e-35	121.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
SprT-like	PF10263.4	gi|118576160|ref|YP_875903.1|	-	0.0014	18.2	0.0	0.0017	17.9	0.0	1.2	1	0	0	1	1	1	1	SprT-like	family
DUF45	PF01863.12	gi|118576160|ref|YP_875903.1|	-	0.0047	16.7	0.0	0.006	16.3	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF45
Peptidase_M76	PF09768.4	gi|118576160|ref|YP_875903.1|	-	0.067	12.6	0.0	0.081	12.3	0.0	1.1	1	0	0	1	1	1	0	Peptidase	M76	family
H_PPase	PF03030.11	gi|118576161|ref|YP_875904.1|	-	5.1e-223	742.2	46.5	5.8e-223	742.0	32.2	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
PepSY_TM_1	PF13172.1	gi|118576161|ref|YP_875904.1|	-	0.024	14.3	2.2	0.091	12.5	0.1	3.1	2	0	0	2	2	2	0	PepSY-associated	TM	helix
Nudix_N_2	PF14803.1	gi|118576162|ref|YP_875905.1|	-	0.036	13.7	0.1	0.23	11.1	0.0	2.0	2	0	0	2	2	2	0	Nudix	N-terminal
UPF0262	PF06793.7	gi|118576162|ref|YP_875905.1|	-	0.14	11.8	0.0	0.18	11.4	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0262)
DUF2024	PF09630.5	gi|118576163|ref|YP_875906.1|	-	2.7e-38	129.5	0.5	2.9e-38	129.4	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2024)
Haem_bd	PF14376.1	gi|118576163|ref|YP_875906.1|	-	0.013	15.2	0.0	0.013	15.1	0.0	1.2	1	0	0	1	1	1	0	Haem-binding	domain
DUF21	PF01595.15	gi|118576164|ref|YP_875907.1|	-	3.8e-52	176.2	0.1	5.4e-52	175.7	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF21
CBS	PF00571.23	gi|118576164|ref|YP_875907.1|	-	1.6e-19	69.3	0.1	5.1e-09	35.7	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
CorC_HlyC	PF03471.12	gi|118576164|ref|YP_875907.1|	-	8.1e-19	67.1	0.5	8.1e-19	67.1	0.4	1.8	2	0	0	2	2	2	1	Transporter	associated	domain
Gp_dh_N	PF00044.19	gi|118576165|ref|YP_875908.1|	-	9e-07	28.9	0.0	0.00021	21.3	0.0	2.9	2	1	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|118576165|ref|YP_875908.1|	-	0.00051	19.9	0.0	0.002	18.0	0.0	2.0	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.19	gi|118576165|ref|YP_875908.1|	-	0.015	15.6	0.0	0.029	14.6	0.0	1.5	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|118576165|ref|YP_875908.1|	-	0.056	13.4	0.0	0.29	11.1	0.0	2.0	2	0	0	2	2	2	0	TrkA-N	domain
C1_3	PF07649.7	gi|118576166|ref|YP_875909.1|	-	0.12	12.4	3.6	3.3	7.8	0.1	2.4	2	0	0	2	2	2	0	C1-like	domain
Thioredoxin_4	PF13462.1	gi|118576169|ref|YP_875912.1|	-	4.9e-30	104.6	0.0	5.9e-30	104.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|118576169|ref|YP_875912.1|	-	1.3e-14	54.1	0.3	2e-13	50.3	0.2	2.0	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|118576169|ref|YP_875912.1|	-	5.8e-09	36.1	0.0	2.5e-08	34.0	0.0	1.9	1	1	0	1	1	1	1	Thioredoxin-like	domain
HMG_CoA_synt_N	PF01154.12	gi|118576170|ref|YP_875913.1|	-	1.2e-30	106.3	0.3	1.8e-30	105.7	0.2	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
HMG_CoA_synt_C	PF08540.5	gi|118576170|ref|YP_875913.1|	-	4.2e-29	101.9	0.1	1.6e-28	100.0	0.0	1.7	1	1	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
AAA_26	PF13500.1	gi|118576172|ref|YP_875915.1|	-	7.7e-36	123.5	0.0	8.9e-36	123.3	0.0	1.0	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.18	gi|118576172|ref|YP_875915.1|	-	3.4e-06	26.6	0.1	9.1e-06	25.2	0.1	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF1611	PF07755.6	gi|118576172|ref|YP_875915.1|	-	0.02	13.5	0.2	0.11	11.0	0.0	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1611)
Aminotran_3	PF00202.16	gi|118576173|ref|YP_875916.1|	-	1.2e-80	270.9	0.0	1.3e-80	270.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
BATS	PF06968.8	gi|118576174|ref|YP_875917.1|	-	2.6e-19	68.8	0.0	5.1e-19	67.9	0.0	1.5	1	0	0	1	1	1	1	Biotin	and	Thiamin	Synthesis	associated	domain
Radical_SAM	PF04055.16	gi|118576174|ref|YP_875917.1|	-	1.3e-17	64.5	0.6	3.6e-17	63.0	0.4	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
Aminotran_1_2	PF00155.16	gi|118576175|ref|YP_875918.1|	-	1.4e-48	165.7	0.0	1.6e-48	165.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|118576175|ref|YP_875918.1|	-	1.1e-06	28.0	0.0	3.4e-06	26.4	0.0	1.9	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|118576175|ref|YP_875918.1|	-	0.0014	16.9	0.0	0.0019	16.5	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DsbD	PF02683.10	gi|118576177|ref|YP_875920.1|	-	2.6e-46	157.8	20.4	3e-46	157.6	14.1	1.0	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
DsbD_2	PF13386.1	gi|118576177|ref|YP_875920.1|	-	2.1e-07	30.8	18.7	3.1e-07	30.3	12.9	1.2	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
DUF2910	PF11139.3	gi|118576177|ref|YP_875920.1|	-	0.00012	21.2	12.6	0.00021	20.4	5.1	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2910)
AhpC-TSA	PF00578.16	gi|118576178|ref|YP_875921.1|	-	6.6e-07	29.0	0.0	1.1e-06	28.3	0.0	1.4	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|118576178|ref|YP_875921.1|	-	3.6e-06	26.5	0.0	5.6e-06	25.9	0.0	1.3	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|118576178|ref|YP_875921.1|	-	0.0003	20.8	0.0	0.00056	19.9	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Snf7	PF03357.16	gi|118576179|ref|YP_875922.1|	-	0.001	18.4	0.6	0.0026	17.1	0.4	1.7	1	1	0	1	1	1	1	Snf7
HPP	PF04982.8	gi|118576181|ref|YP_875924.1|	-	0.06	13.1	0.5	0.069	12.9	0.3	1.1	1	0	0	1	1	1	0	HPP	family
DUF371	PF04027.8	gi|118576182|ref|YP_875925.1|	-	9.9e-39	132.0	0.0	1.1e-38	131.9	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
Phage_base_V	PF04717.7	gi|118576183|ref|YP_875926.1|	-	0.091	12.7	0.1	0.33	10.9	0.0	1.9	2	0	0	2	2	2	0	Phage-related	baseplate	assembly	protein
Proteasome	PF00227.21	gi|118576184|ref|YP_875927.1|	-	1.6e-52	177.5	0.7	1.2e-51	174.7	0.2	2.0	1	1	1	2	2	2	2	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|118576184|ref|YP_875927.1|	-	1.1e-14	53.4	1.5	5.1e-14	51.2	0.1	2.7	3	0	0	3	3	3	1	Proteasome	subunit	A	N-terminal	signature
Methyltrn_RNA_3	PF02598.12	gi|118576185|ref|YP_875928.1|	-	4.1e-51	174.0	0.0	8.1e-51	173.0	0.0	1.5	1	1	0	1	1	1	1	Putative	RNA	methyltransferase
SpoU_methylase	PF00588.14	gi|118576185|ref|YP_875928.1|	-	0.023	14.5	0.0	4.1	7.2	0.0	2.1	2	0	0	2	2	2	0	SpoU	rRNA	Methylase	family
UDPG_MGDP_dh_N	PF03721.9	gi|118576186|ref|YP_875929.1|	-	1.9e-28	99.1	0.0	3e-28	98.4	0.0	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.14	gi|118576186|ref|YP_875929.1|	-	1.3e-23	82.9	0.0	4e-23	81.4	0.0	1.8	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.10	gi|118576186|ref|YP_875929.1|	-	1.8e-14	53.7	0.0	3.4e-14	52.8	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.10	gi|118576186|ref|YP_875929.1|	-	0.0011	18.8	0.0	0.016	15.0	0.0	2.6	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.13	gi|118576186|ref|YP_875929.1|	-	0.037	14.0	0.0	0.17	11.9	0.0	2.0	2	0	0	2	2	2	0	TrkA-N	domain
Epimerase_2	PF02350.14	gi|118576187|ref|YP_875930.1|	-	6.6e-84	281.6	0.0	8.5e-84	281.2	0.0	1.1	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_4_2	PF13477.1	gi|118576187|ref|YP_875930.1|	-	0.14	11.9	0.0	0.24	11.2	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|118576188|ref|YP_875931.1|	-	7.3e-26	90.6	0.0	1.3e-25	89.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|118576188|ref|YP_875931.1|	-	2.7e-15	56.6	0.0	6.6e-15	55.4	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|118576188|ref|YP_875931.1|	-	4.6e-11	43.1	0.7	9e-11	42.1	0.5	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|118576188|ref|YP_875931.1|	-	6.5e-06	26.3	0.0	1.4e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|118576188|ref|YP_875931.1|	-	0.0038	16.9	0.1	0.0065	16.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|118576188|ref|YP_875931.1|	-	0.012	15.4	0.0	0.022	14.5	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|118576189|ref|YP_875932.1|	-	1.2e-25	89.8	0.0	2.5e-25	88.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|118576189|ref|YP_875932.1|	-	3e-13	50.1	0.1	9.2e-13	48.5	0.0	1.8	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|118576189|ref|YP_875932.1|	-	4e-11	43.3	0.2	7.5e-11	42.4	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|118576189|ref|YP_875932.1|	-	1.4e-05	25.2	0.0	3.8e-05	23.8	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|118576189|ref|YP_875932.1|	-	9.9e-05	22.1	0.0	0.00021	21.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|118576189|ref|YP_875932.1|	-	0.0022	17.8	0.0	0.011	15.5	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|118576191|ref|YP_875934.1|	-	2.5e-20	72.5	0.0	3.8e-20	71.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|118576191|ref|YP_875934.1|	-	1.1e-19	70.8	0.0	2.1e-19	69.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|118576191|ref|YP_875934.1|	-	2.7e-14	53.6	0.0	6e-14	52.4	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.1	gi|118576191|ref|YP_875934.1|	-	5.5e-12	45.7	0.0	8.4e-12	45.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|118576191|ref|YP_875934.1|	-	3.2e-11	43.3	0.0	7.2e-11	42.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|118576192|ref|YP_875935.1|	-	6.7e-26	91.2	0.0	9.1e-26	90.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
PCMT	PF01135.14	gi|118576192|ref|YP_875935.1|	-	0.0057	16.2	0.0	0.0093	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.1	gi|118576192|ref|YP_875935.1|	-	0.0059	16.3	0.0	0.018	14.7	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
V_cholerae_RfbT	PF05575.6	gi|118576192|ref|YP_875935.1|	-	0.079	12.0	0.0	0.42	9.6	0.0	2.0	1	1	1	2	2	2	0	Vibrio	cholerae	RfbT	protein
Methyltransf_3	PF01596.12	gi|118576192|ref|YP_875935.1|	-	0.12	11.3	0.0	0.22	10.5	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
Polysacc_synt_3	PF13440.1	gi|118576193|ref|YP_875936.1|	-	1.1e-05	25.0	22.2	1.1e-05	25.0	15.4	3.7	1	1	3	4	4	4	1	Polysaccharide	biosynthesis	protein
Glycos_transf_1	PF00534.15	gi|118576194|ref|YP_875937.1|	-	3.3e-25	88.4	0.0	1.6e-24	86.2	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|118576194|ref|YP_875937.1|	-	8e-15	55.1	0.1	2.3e-14	53.7	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|118576194|ref|YP_875937.1|	-	3.1e-07	30.6	0.2	7.7e-07	29.3	0.2	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|118576194|ref|YP_875937.1|	-	7e-05	23.0	0.0	0.00015	21.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|118576194|ref|YP_875937.1|	-	0.0079	16.0	0.0	0.014	15.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|118576195|ref|YP_875938.1|	-	7.5e-19	67.7	0.0	4.5e-18	65.2	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|118576195|ref|YP_875938.1|	-	3.5e-09	36.8	0.0	7.1e-09	35.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|118576195|ref|YP_875938.1|	-	8e-09	35.7	0.0	1.4e-08	35.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|118576195|ref|YP_875938.1|	-	2.3e-08	34.3	9.7	1.6e-07	31.6	6.7	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Epimerase_2	PF02350.14	gi|118576195|ref|YP_875938.1|	-	0.01	14.6	0.0	0.017	13.9	0.0	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
Epimerase	PF01370.16	gi|118576196|ref|YP_875939.1|	-	1.3e-58	198.1	0.3	1.8e-58	197.7	0.2	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|118576196|ref|YP_875939.1|	-	8.8e-27	93.5	0.0	1.2e-26	93.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|118576196|ref|YP_875939.1|	-	1.4e-19	70.0	0.0	1.8e-19	69.7	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|118576196|ref|YP_875939.1|	-	1.4e-14	53.6	0.2	1.4e-13	50.4	0.2	2.3	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|118576196|ref|YP_875939.1|	-	1.3e-13	50.5	0.6	1e-09	37.7	0.0	2.2	1	1	1	2	2	2	2	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|118576196|ref|YP_875939.1|	-	3.1e-13	50.1	0.6	6.2e-13	49.1	0.4	1.5	1	1	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|118576196|ref|YP_875939.1|	-	9.4e-09	35.3	2.8	1.2e-08	35.0	1.0	1.8	2	0	0	2	2	2	1	short	chain	dehydrogenase
NmrA	PF05368.8	gi|118576196|ref|YP_875939.1|	-	1.8e-07	30.6	0.3	3.3e-06	26.5	0.2	2.5	1	1	0	1	1	1	1	NmrA-like	family
KR	PF08659.5	gi|118576196|ref|YP_875939.1|	-	6.4e-05	22.7	4.4	0.0006	19.5	3.1	2.2	1	1	0	1	1	1	1	KR	domain
DAO	PF01266.19	gi|118576196|ref|YP_875939.1|	-	0.001	18.0	0.2	0.0024	16.8	0.1	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
TrkA_N	PF02254.13	gi|118576196|ref|YP_875939.1|	-	0.0024	17.8	0.1	0.0086	16.0	0.1	2.0	2	0	0	2	2	2	1	TrkA-N	domain
3HCDH_N	PF02737.13	gi|118576196|ref|YP_875939.1|	-	0.0045	16.6	0.0	0.0071	16.0	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DFP	PF04127.10	gi|118576196|ref|YP_875939.1|	-	0.021	14.4	0.0	0.041	13.4	0.0	1.5	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
NAD_binding_2	PF03446.10	gi|118576196|ref|YP_875939.1|	-	0.023	14.5	0.0	0.036	13.9	0.0	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_7	PF13241.1	gi|118576196|ref|YP_875939.1|	-	0.027	14.7	0.1	0.067	13.4	0.0	1.7	2	0	0	2	2	1	0	Putative	NAD(P)-binding
Glyco_trans_4_4	PF13579.1	gi|118576196|ref|YP_875939.1|	-	0.035	14.2	0.3	0.21	11.7	0.2	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.1	gi|118576196|ref|YP_875939.1|	-	0.04	13.6	0.1	0.26	10.9	0.1	2.0	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
UDPG_MGDP_dh_N	PF03721.9	gi|118576196|ref|YP_875939.1|	-	0.068	12.5	0.1	0.11	11.9	0.1	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|118576196|ref|YP_875939.1|	-	0.081	11.8	0.3	0.12	11.2	0.2	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
DUF1876	PF08962.6	gi|118576196|ref|YP_875939.1|	-	0.091	12.5	0.9	1.7	8.4	0.0	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1876)
Asn_synthase	PF00733.16	gi|118576197|ref|YP_875940.1|	-	5.5e-26	91.5	0.0	7.9e-26	91.0	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|118576197|ref|YP_875940.1|	-	0.0045	15.5	0.2	0.006	15.1	0.1	1.1	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|118576197|ref|YP_875940.1|	-	0.0057	15.5	0.0	0.0092	14.9	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.8	gi|118576197|ref|YP_875940.1|	-	0.013	14.7	0.0	0.019	14.2	0.0	1.1	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|118576197|ref|YP_875940.1|	-	0.057	12.9	0.1	0.085	12.3	0.1	1.3	1	0	0	1	1	1	0	PP-loop	family
Methyltransf_11	PF08241.7	gi|118576198|ref|YP_875941.1|	-	2.3e-14	53.6	0.0	5.6e-14	52.4	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118576198|ref|YP_875941.1|	-	4.3e-13	49.1	0.0	6.6e-13	48.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118576198|ref|YP_875941.1|	-	4.3e-12	46.0	0.0	7.9e-11	41.9	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118576198|ref|YP_875941.1|	-	1.1e-10	41.8	0.0	1.8e-10	41.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118576198|ref|YP_875941.1|	-	1.2e-09	38.7	0.0	2.4e-09	37.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118576198|ref|YP_875941.1|	-	4.8e-08	33.2	0.0	1.1e-07	32.1	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118576198|ref|YP_875941.1|	-	0.0001	22.3	0.0	0.00018	21.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|118576198|ref|YP_875941.1|	-	0.007	15.5	0.0	0.011	14.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
zf-RING_3	PF14369.1	gi|118576200|ref|YP_875943.1|	-	0.019	14.9	3.0	0.2	11.6	0.0	2.7	2	0	0	2	2	2	0	zinc-finger
HypA	PF01155.14	gi|118576200|ref|YP_875943.1|	-	0.17	11.5	1.6	0.24	11.1	1.1	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|118576200|ref|YP_875943.1|	-	0.41	10.4	6.2	0.86	9.4	4.4	1.5	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF1451	PF07295.6	gi|118576200|ref|YP_875943.1|	-	1.1	9.0	4.4	0.75	9.5	1.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1451)
Radical_SAM	PF04055.16	gi|118576201|ref|YP_875944.1|	-	6.7e-17	62.1	0.1	6.7e-17	62.1	0.1	2.7	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|118576201|ref|YP_875944.1|	-	3.2e-08	33.5	0.0	3.2e-08	33.5	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|118576201|ref|YP_875944.1|	-	1.6e-07	31.5	0.0	5.9e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
ResIII	PF04851.10	gi|118576202|ref|YP_875945.1|	-	1.6e-19	70.4	0.1	2e-18	66.8	0.0	2.8	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Mrr_cat_2	PF13156.1	gi|118576202|ref|YP_875945.1|	-	2.1e-14	53.5	4.0	4.3e-14	52.5	0.9	2.5	2	0	0	2	2	2	1	Restriction	endonuclease
Methyltransf_26	PF13659.1	gi|118576202|ref|YP_875945.1|	-	1.3e-08	34.8	0.0	7.5e-08	32.4	0.0	2.3	2	1	0	2	2	2	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|118576202|ref|YP_875945.1|	-	1.5e-07	30.8	0.2	3.7e-07	29.5	0.1	1.7	1	1	0	1	1	1	1	N-6	DNA	Methylase
DEAD	PF00270.24	gi|118576202|ref|YP_875945.1|	-	1.7e-07	30.8	0.0	1.2e-06	28.1	0.0	2.3	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118576202|ref|YP_875945.1|	-	3.1e-06	26.9	0.0	7.7e-06	25.6	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DUF234	PF03008.9	gi|118576202|ref|YP_875945.1|	-	0.00017	21.6	0.7	0.00062	19.8	0.5	1.9	1	0	0	1	1	1	1	Archaea	bacterial	proteins	of	unknown	function
UPF0020	PF01170.13	gi|118576202|ref|YP_875945.1|	-	0.06	12.9	0.0	0.53	9.8	0.0	2.6	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
SWIM	PF04434.12	gi|118576203|ref|YP_875946.1|	-	0.022	14.2	0.8	0.05	13.0	0.5	1.6	1	0	0	1	1	1	0	SWIM	zinc	finger
Radical_SAM	PF04055.16	gi|118576205|ref|YP_875948.1|	-	7.5e-17	61.9	0.1	7.5e-17	61.9	0.1	2.7	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|118576205|ref|YP_875948.1|	-	3.6e-08	33.4	0.0	3.6e-08	33.4	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|118576205|ref|YP_875948.1|	-	1.8e-07	31.3	0.0	6.5e-07	29.5	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
TrmB	PF01978.14	gi|118576206|ref|YP_875949.1|	-	1.4e-21	75.9	0.0	2.9e-21	74.9	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Regulator_TrmB	PF11495.3	gi|118576206|ref|YP_875949.1|	-	1.9e-06	27.0	0.0	2.4e-06	26.7	0.0	1.1	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
HTH_29	PF13551.1	gi|118576206|ref|YP_875949.1|	-	4.8e-05	23.4	0.0	8.7e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_IclR	PF09339.5	gi|118576206|ref|YP_875949.1|	-	9.8e-05	21.8	0.0	0.00061	19.3	0.0	2.1	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|118576206|ref|YP_875949.1|	-	9.9e-05	21.6	0.0	0.00025	20.3	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|118576206|ref|YP_875949.1|	-	0.00068	19.9	0.0	0.0015	18.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|118576206|ref|YP_875949.1|	-	0.0012	18.4	0.0	0.0022	17.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|118576206|ref|YP_875949.1|	-	0.0018	17.9	0.0	0.0032	17.1	0.0	1.4	1	0	0	1	1	1	1	MarR	family
FaeA	PF04703.7	gi|118576206|ref|YP_875949.1|	-	0.0029	17.7	0.4	0.22	11.7	0.1	2.8	2	1	0	2	2	2	1	FaeA-like	protein
Rrf2	PF02082.15	gi|118576206|ref|YP_875949.1|	-	0.0065	16.5	0.1	0.026	14.6	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_28	PF13518.1	gi|118576206|ref|YP_875949.1|	-	0.015	15.2	0.0	0.037	14.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|118576206|ref|YP_875949.1|	-	0.049	13.7	0.0	0.093	12.8	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_23	PF13384.1	gi|118576206|ref|YP_875949.1|	-	0.06	13.0	0.0	0.17	11.5	0.0	1.8	1	0	0	1	1	1	0	Homeodomain-like	domain
HemN_C	PF06969.11	gi|118576206|ref|YP_875949.1|	-	0.07	13.1	0.0	0.18	11.8	0.0	1.7	1	0	0	1	1	1	0	HemN	C-terminal	domain
PLDc_2	PF13091.1	gi|118576206|ref|YP_875949.1|	-	0.098	12.4	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	PLD-like	domain
Fe_dep_repr_C	PF02742.10	gi|118576207|ref|YP_875950.1|	-	4e-19	68.0	0.6	6e-19	67.5	0.0	1.6	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|118576207|ref|YP_875950.1|	-	1.3e-14	53.8	0.2	2.2e-14	53.1	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|118576207|ref|YP_875950.1|	-	0.00027	21.1	0.0	0.00043	20.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|118576207|ref|YP_875950.1|	-	0.00064	19.4	0.0	0.0014	18.3	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|118576207|ref|YP_875950.1|	-	0.0011	18.6	0.1	0.0017	18.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|118576207|ref|YP_875950.1|	-	0.0014	18.6	0.1	0.0025	17.8	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.2	gi|118576207|ref|YP_875950.1|	-	0.0022	17.6	0.0	0.0036	16.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|118576207|ref|YP_875950.1|	-	0.0072	16.0	0.2	0.012	15.3	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_1	PF00126.22	gi|118576207|ref|YP_875950.1|	-	0.011	15.4	0.0	0.024	14.3	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_45	PF14947.1	gi|118576207|ref|YP_875950.1|	-	0.015	15.1	0.1	0.021	14.6	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix
CutA1	PF03091.10	gi|118576208|ref|YP_875951.1|	-	1.8e-27	94.9	0.0	2e-27	94.8	0.0	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
eRF1_1	PF03463.10	gi|118576209|ref|YP_875952.1|	-	8.8e-18	64.1	0.0	1.3e-17	63.6	0.0	1.2	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|118576209|ref|YP_875952.1|	-	1.4e-06	28.5	0.0	1.6e-05	25.1	0.0	2.4	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|118576209|ref|YP_875952.1|	-	7.2e-05	23.1	0.0	0.00013	22.3	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	2
UPF0047	PF01894.12	gi|118576211|ref|YP_875954.1|	-	1.1e-36	125.2	0.0	1.3e-36	125.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
Lar_restr_allev	PF14354.1	gi|118576212|ref|YP_875955.1|	-	0.51	10.6	3.8	0.92	9.8	2.7	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DNA_ligase_A_M	PF01068.16	gi|118576214|ref|YP_875957.1|	-	1.1e-49	168.5	0.0	1.7e-49	167.9	0.0	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|118576214|ref|YP_875957.1|	-	5e-45	153.4	0.8	8.3e-45	152.7	0.3	1.5	2	0	0	2	2	2	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|118576214|ref|YP_875957.1|	-	4.6e-22	78.2	0.0	1.4e-21	76.6	0.0	1.9	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.1	gi|118576214|ref|YP_875957.1|	-	0.05	13.2	0.1	0.19	11.4	0.0	2.0	2	0	0	2	2	2	0	DNA	ligase	OB-like	domain
DUF3487	PF11990.3	gi|118576215|ref|YP_875958.1|	-	0.018	14.4	0.1	0.028	13.8	0.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3487)
CcoS	PF03597.10	gi|118576215|ref|YP_875958.1|	-	0.13	11.7	4.3	0.29	10.6	3.0	1.6	1	0	0	1	1	1	0	Cytochrome	oxidase	maturation	protein	cbb3-type
Pex2_Pex12	PF04757.9	gi|118576215|ref|YP_875958.1|	-	0.84	9.0	3.0	0.48	9.8	0.7	1.5	1	1	0	1	1	1	0	Pex2	/	Pex12	amino	terminal	region
zf-HC2	PF13490.1	gi|118576221|ref|YP_875964.1|	-	0.21	11.5	2.5	0.29	11.1	0.5	2.2	2	0	0	2	2	2	0	Putative	zinc-finger
Copper-bind	PF00127.15	gi|118576225|ref|YP_875968.1|	-	0.11	12.7	0.0	0.32	11.2	0.0	1.7	1	1	0	1	1	1	0	Copper	binding	proteins,	plastocyanin/azurin	family
PhoU_div	PF01865.11	gi|118576228|ref|YP_875971.1|	-	1.6e-20	73.2	6.3	1.9e-20	72.9	4.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|118576228|ref|YP_875971.1|	-	0.012	15.9	12.2	0.079	13.4	1.8	3.2	2	2	2	4	4	4	0	PhoU	domain
DUF458	PF04308.7	gi|118576228|ref|YP_875971.1|	-	0.082	12.6	2.1	6.2	6.5	0.0	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF458)
DUF677	PF05055.7	gi|118576228|ref|YP_875971.1|	-	0.097	11.3	3.8	0.13	10.9	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF677)
MobC	PF05713.6	gi|118576228|ref|YP_875971.1|	-	0.19	11.7	1.8	8.4	6.4	0.1	3.6	3	0	0	3	3	3	0	Bacterial	mobilisation	protein	(MobC)
UTP15_C	PF09384.5	gi|118576228|ref|YP_875971.1|	-	0.52	9.9	3.2	7.8	6.1	0.0	3.1	3	1	0	3	3	3	0	UTP15	C	terminal
Cauli_AT	PF03233.8	gi|118576228|ref|YP_875971.1|	-	0.96	9.1	3.9	0.78	9.4	0.2	2.3	2	1	0	2	2	2	0	Aphid	transmission	protein
tRNA_int_endo	PF01974.12	gi|118576229|ref|YP_875972.1|	-	2.2e-27	94.6	0.0	3.5e-27	94.0	0.0	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|118576229|ref|YP_875972.1|	-	2.4e-17	62.2	0.0	3.7e-17	61.6	0.0	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	N-terminal	domain
Mrr_cat_2	PF13156.1	gi|118576233|ref|YP_875976.1|	-	2.7e-06	27.3	0.1	3.3e-06	27.0	0.0	1.1	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat	PF04471.7	gi|118576233|ref|YP_875976.1|	-	4.4e-05	23.2	0.0	4.9e-05	23.0	0.0	1.1	1	0	0	1	1	1	1	Restriction	endonuclease
DUF4095	PF13338.1	gi|118576236|ref|YP_875979.1|	-	1.1e-19	70.7	0.0	2.1e-19	69.8	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4095)
DUF1814	PF08843.6	gi|118576237|ref|YP_875980.1|	-	5e-06	26.4	0.0	5.4e-06	26.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
DUF4095	PF13338.1	gi|118576238|ref|YP_875981.1|	-	3.3e-19	69.2	0.0	5.3e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4095)
DUF1814	PF08843.6	gi|118576239|ref|YP_875982.1|	-	1.2e-27	97.2	0.0	1.5e-27	96.9	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
DUF4095	PF13338.1	gi|118576240|ref|YP_875983.1|	-	6.2e-21	74.8	0.0	1.1e-20	74.0	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4095)
DUF1814	PF08843.6	gi|118576241|ref|YP_875984.1|	-	6.8e-08	32.5	0.3	7.6e-08	32.4	0.2	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
DUF4095	PF13338.1	gi|118576243|ref|YP_875986.1|	-	1.8e-20	73.3	0.0	3.5e-20	72.4	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4095)
DUF1814	PF08843.6	gi|118576244|ref|YP_875987.1|	-	2.5e-30	105.9	0.0	3.1e-30	105.7	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF1814)
ABC-3	PF00950.12	gi|118576245|ref|YP_875988.1|	-	3.9e-58	196.7	39.8	4.4e-58	196.5	27.6	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|118576245|ref|YP_875988.1|	-	0.0024	16.7	42.3	0.0064	15.3	29.3	1.7	1	1	0	1	1	1	1	FecCD	transport	family
ABC_tran	PF00005.22	gi|118576246|ref|YP_875989.1|	-	1.4e-24	86.9	0.0	2.1e-24	86.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576246|ref|YP_875989.1|	-	3e-11	43.8	0.0	0.00016	21.7	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|118576246|ref|YP_875989.1|	-	6.4e-05	23.3	0.1	0.00011	22.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|118576246|ref|YP_875989.1|	-	0.0037	16.5	0.0	0.019	14.1	0.0	1.8	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|118576246|ref|YP_875989.1|	-	0.0064	15.9	0.0	0.013	15.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|118576246|ref|YP_875989.1|	-	0.017	14.5	0.1	1.8	7.9	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_16	PF13191.1	gi|118576246|ref|YP_875989.1|	-	0.03	14.3	0.1	0.17	11.8	0.1	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|118576246|ref|YP_875989.1|	-	0.03	14.2	0.2	0.83	9.6	0.1	2.3	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.1	gi|118576246|ref|YP_875989.1|	-	0.055	13.0	0.0	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|118576246|ref|YP_875989.1|	-	0.091	12.9	0.1	0.8	9.9	0.1	2.1	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|118576246|ref|YP_875989.1|	-	0.12	11.4	0.0	0.2	10.7	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
TroA	PF01297.12	gi|118576247|ref|YP_875990.1|	-	1.3e-85	286.7	54.9	3.5e-85	285.3	38.1	1.7	1	1	0	1	1	1	1	Periplasmic	solute	binding	protein	family
DUF2970	PF11174.3	gi|118576247|ref|YP_875990.1|	-	2.7	7.6	5.2	12	5.5	3.6	2.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2970)
NikR_C	PF08753.6	gi|118576248|ref|YP_875991.1|	-	2.3e-07	30.6	0.0	3.5e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.16	gi|118576248|ref|YP_875991.1|	-	0.00014	21.6	0.1	0.00024	20.8	0.1	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2191	PF09957.4	gi|118576248|ref|YP_875991.1|	-	0.00051	19.7	0.0	0.0011	18.7	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
B12-binding	PF02310.14	gi|118576249|ref|YP_875992.1|	-	7.9e-14	51.5	0.0	1.1e-13	51.1	0.0	1.1	1	0	0	1	1	1	1	B12	binding	domain
Response_reg	PF00072.19	gi|118576249|ref|YP_875992.1|	-	0.0021	18.0	0.0	0.0029	17.5	0.0	1.2	1	0	0	1	1	1	1	Response	regulator	receiver	domain
B12-binding_2	PF02607.12	gi|118576249|ref|YP_875992.1|	-	0.0061	16.5	0.0	0.0097	15.9	0.0	1.3	1	0	0	1	1	1	1	B12	binding	domain
CBM_1	PF00734.13	gi|118576249|ref|YP_875992.1|	-	0.15	11.7	0.0	0.26	10.9	0.0	1.3	1	0	0	1	1	1	0	Fungal	cellulose	binding	domain
DUF3072	PF11272.3	gi|118576250|ref|YP_875993.1|	-	0.077	12.6	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3072)
Amino_oxidase	PF01593.19	gi|118576252|ref|YP_875995.1|	-	1.2e-17	64.1	0.0	2.1e-17	63.3	0.0	1.4	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|118576252|ref|YP_875995.1|	-	3.1e-15	55.9	0.4	7.3e-15	54.7	0.3	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|118576252|ref|YP_875995.1|	-	1.3e-11	44.0	0.8	9.4e-07	28.0	0.3	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|118576252|ref|YP_875995.1|	-	6e-08	32.9	0.2	3.1e-05	24.2	0.1	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|118576252|ref|YP_875995.1|	-	3.3e-06	25.7	0.2	0.00074	17.9	0.0	2.1	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
FAD_binding_2	PF00890.19	gi|118576252|ref|YP_875995.1|	-	4.2e-06	25.8	2.6	0.00014	20.9	1.9	2.2	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|118576252|ref|YP_875995.1|	-	2.9e-05	23.3	0.1	0.0016	17.5	0.2	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|118576252|ref|YP_875995.1|	-	2.9e-05	23.2	1.1	4.6e-05	22.6	0.7	1.3	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|118576252|ref|YP_875995.1|	-	3.4e-05	23.0	0.6	0.00012	21.2	0.9	1.5	2	0	0	2	2	2	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|118576252|ref|YP_875995.1|	-	0.00011	20.7	0.1	0.0085	14.6	0.7	2.3	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|118576252|ref|YP_875995.1|	-	0.00022	21.3	0.2	0.012	15.7	0.1	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|118576252|ref|YP_875995.1|	-	0.018	14.9	0.1	0.6	9.9	0.1	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Elong-fact-P_C	PF09285.6	gi|118576252|ref|YP_875995.1|	-	0.037	13.3	0.0	0.068	12.5	0.0	1.4	1	0	0	1	1	1	0	Elongation	factor	P,	C-terminal
UDPG_MGDP_dh_N	PF03721.9	gi|118576252|ref|YP_875995.1|	-	0.061	12.6	0.8	0.1	12.0	0.3	1.6	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|118576252|ref|YP_875995.1|	-	0.083	11.7	0.2	3.5	6.4	0.3	2.1	2	0	0	2	2	2	0	Lycopene	cyclase	protein
FMO-like	PF00743.14	gi|118576252|ref|YP_875995.1|	-	0.11	10.6	0.1	0.17	10.0	0.1	1.2	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
3HCDH_N	PF02737.13	gi|118576252|ref|YP_875995.1|	-	0.14	11.7	0.7	0.32	10.6	0.5	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
tRNA-synt_1	PF00133.17	gi|118576253|ref|YP_875996.1|	-	1.6e-96	323.6	0.0	1.9e-95	320.0	0.0	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|118576253|ref|YP_875996.1|	-	9.3e-33	113.1	0.0	1.5e-32	112.4	0.0	1.3	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|118576253|ref|YP_875996.1|	-	1.9e-20	72.8	0.0	1.4e-11	43.7	0.0	3.4	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|118576253|ref|YP_875996.1|	-	0.00037	19.8	0.0	0.00087	18.6	0.0	1.6	1	1	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
PTPS	PF01242.14	gi|118576254|ref|YP_875997.1|	-	4.9e-19	68.2	0.1	1.4e-18	66.7	0.0	1.7	2	0	0	2	2	2	1	6-pyruvoyl	tetrahydropterin	synthase
Vsr	PF03852.10	gi|118576254|ref|YP_875997.1|	-	0.035	13.7	0.0	0.093	12.3	0.0	1.6	1	0	0	1	1	1	0	DNA	mismatch	endonuclease	Vsr
Pterin_4a	PF01329.14	gi|118576255|ref|YP_875998.1|	-	3e-30	103.8	0.0	3.4e-30	103.6	0.0	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
ParBc	PF02195.13	gi|118576256|ref|YP_875999.1|	-	3e-16	59.2	0.2	8.6e-16	57.8	0.0	1.9	2	0	0	2	2	2	1	ParB-like	nuclease	domain
NUMOD1	PF07453.8	gi|118576256|ref|YP_875999.1|	-	0.00016	21.4	0.1	0.091	12.6	0.0	2.8	2	0	0	2	2	2	1	NUMOD1	domain
HTH_40	PF14493.1	gi|118576256|ref|YP_875999.1|	-	0.00095	19.3	0.5	0.0054	16.9	0.0	2.6	2	1	1	3	3	3	1	Helix-turn-helix	domain
Peptidase_C23	PF05379.6	gi|118576256|ref|YP_875999.1|	-	0.0023	17.8	0.0	0.0059	16.5	0.0	1.8	1	0	0	1	1	1	1	Carlavirus	endopeptidase
HTH_23	PF13384.1	gi|118576256|ref|YP_875999.1|	-	0.0055	16.3	0.1	0.025	14.2	0.0	2.2	1	1	0	1	1	1	1	Homeodomain-like	domain
HTH_Tnp_ISL3	PF13542.1	gi|118576256|ref|YP_875999.1|	-	0.02	14.0	0.0	0.047	12.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_29	PF13551.1	gi|118576256|ref|YP_875999.1|	-	0.047	13.8	0.1	0.61	10.2	0.0	2.4	1	1	1	2	2	2	0	Winged	helix-turn	helix
Bro-N	PF02498.12	gi|118576256|ref|YP_875999.1|	-	0.054	13.7	2.4	0.36	11.1	0.2	2.8	1	1	0	2	2	2	0	BRO	family,	N-terminal	domain
MerR_1	PF13411.1	gi|118576256|ref|YP_875999.1|	-	0.063	13.0	0.0	0.25	11.1	0.0	2.1	1	1	0	1	1	1	0	MerR	HTH	family	regulatory	protein
SRP_SPB	PF02978.14	gi|118576256|ref|YP_875999.1|	-	0.1	12.8	2.3	0.12	12.6	0.1	2.2	2	0	0	2	2	2	0	Signal	peptide	binding	domain
MerR	PF00376.18	gi|118576256|ref|YP_875999.1|	-	0.14	11.7	0.0	0.35	10.4	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
DUF2203	PF09969.4	gi|118576256|ref|YP_875999.1|	-	0.32	11.2	4.6	2.7	8.2	0.0	2.6	3	0	0	3	3	3	0	Uncharacterized	conserved	protein	(DUF2203)
HTH_22	PF13309.1	gi|118576256|ref|YP_875999.1|	-	1.4	8.7	4.7	1.3	8.8	0.8	2.8	2	1	0	2	2	2	0	HTH	domain
VP_N-CPKC	PF11475.3	gi|118576258|ref|YP_876001.1|	-	3.1	7.4	4.9	8.5	6.0	0.6	2.3	2	0	0	2	2	2	0	Virion	protein	N	terminal	domain
Asn_synthase	PF00733.16	gi|118576259|ref|YP_876002.1|	-	1.5e-27	96.6	0.1	6.1e-27	94.7	0.1	1.7	1	1	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|118576259|ref|YP_876002.1|	-	0.0019	17.5	0.0	0.0028	16.9	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|118576259|ref|YP_876002.1|	-	0.004	15.7	0.0	0.0061	15.1	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|118576259|ref|YP_876002.1|	-	0.0058	15.5	0.0	0.013	14.4	0.0	1.6	2	0	0	2	2	2	1	NAD	synthase
Lyase_1	PF00206.15	gi|118576260|ref|YP_876003.1|	-	2.9e-43	148.2	0.0	4.3e-43	147.6	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|118576260|ref|YP_876003.1|	-	5.9e-17	61.4	0.0	1.5e-16	60.1	0.0	1.7	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
DUF288	PF03385.12	gi|118576262|ref|YP_876005.1|	-	0.039	12.4	0.1	0.04	12.3	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF288
DUF1660	PF07874.6	gi|118576262|ref|YP_876005.1|	-	0.2	11.9	1.0	0.29	11.4	0.7	1.3	1	1	0	1	1	1	0	Prophage	protein	(DUF1660)
DUF1147	PF06615.6	gi|118576263|ref|YP_876006.1|	-	0.14	11.9	0.0	0.23	11.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1147)
RtcB	PF01139.12	gi|118576264|ref|YP_876007.1|	-	4.6e-149	496.9	0.1	5.1e-149	496.8	0.1	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
DUF3492	PF11997.3	gi|118576264|ref|YP_876007.1|	-	0.18	11.3	0.0	0.29	10.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3492)
dsDNA_bind	PF01984.15	gi|118576265|ref|YP_876008.1|	-	0.00014	21.8	0.6	0.00017	21.5	0.4	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
CRISPR_Cse1	PF09481.5	gi|118576265|ref|YP_876008.1|	-	0.13	11.0	0.0	0.15	10.7	0.0	1.0	1	0	0	1	1	1	0	CRISPR-associated	protein	Cse1	(CRISPR_cse1)
SHOCT	PF09851.4	gi|118576265|ref|YP_876008.1|	-	0.36	10.3	3.2	4.9	6.7	0.1	2.5	2	0	0	2	2	2	0	Short	C-terminal	domain
Ribosomal_S11	PF00411.14	gi|118576267|ref|YP_876010.1|	-	1.2e-30	105.9	1.0	1.4e-30	105.7	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
AIRS	PF00586.19	gi|118576268|ref|YP_876011.1|	-	7e-15	55.0	0.1	1.3e-14	54.2	0.1	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|118576268|ref|YP_876011.1|	-	6.1e-08	32.8	0.0	1.1e-07	31.9	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
PGM_PMM_I	PF02878.11	gi|118576269|ref|YP_876012.1|	-	2.7e-22	78.7	0.0	7.1e-22	77.3	0.0	1.7	1	1	1	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.11	gi|118576269|ref|YP_876012.1|	-	1.7e-14	53.8	0.1	3.5e-14	52.8	0.1	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.11	gi|118576269|ref|YP_876012.1|	-	4.4e-12	46.2	0.0	9.9e-12	45.1	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|118576269|ref|YP_876012.1|	-	3.8e-08	33.2	0.4	2.5e-07	30.6	0.0	2.2	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF3784	PF12650.2	gi|118576270|ref|YP_876013.1|	-	0.025	14.4	0.1	0.027	14.4	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3784)
HTH_45	PF14947.1	gi|118576272|ref|YP_876015.1|	-	1.1e-15	57.1	0.0	1.3e-15	56.9	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|118576272|ref|YP_876015.1|	-	0.0012	18.7	0.0	0.0017	18.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RNA_pol_Rpc34	PF05158.7	gi|118576272|ref|YP_876015.1|	-	0.02	14.1	0.0	0.026	13.6	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
Pentapeptide	PF00805.17	gi|118576272|ref|YP_876015.1|	-	0.024	13.8	0.3	2.2	7.5	0.0	2.2	2	0	0	2	2	2	0	Pentapeptide	repeats	(8	copies)
Rrf2	PF02082.15	gi|118576272|ref|YP_876015.1|	-	0.048	13.7	0.2	0.068	13.3	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
Mrr_N	PF14338.1	gi|118576272|ref|YP_876015.1|	-	0.055	13.5	0.0	0.062	13.3	0.0	1.2	1	0	0	1	1	1	0	Mrr	N-terminal	domain
MarR	PF01047.17	gi|118576272|ref|YP_876015.1|	-	0.059	13.0	0.1	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
DUF4364	PF14277.1	gi|118576272|ref|YP_876015.1|	-	0.11	12.1	0.0	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DDE_Tnp_IS66	PF03050.9	gi|118576276|ref|YP_876019.1|	-	6.9e-07	28.7	0.1	7.8e-07	28.5	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS66	family
DDE_Tnp_IS66	PF03050.9	gi|118576277|ref|YP_876020.1|	-	0.00017	20.8	0.0	0.00019	20.7	0.0	1.1	1	0	0	1	1	1	1	Transposase	IS66	family
N6_N4_Mtase	PF01555.13	gi|118576278|ref|YP_876021.1|	-	3.8e-15	56.0	0.2	5.6e-14	52.1	0.1	2.5	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576278|ref|YP_876021.1|	-	0.011	15.7	0.0	0.27	11.2	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576278|ref|YP_876021.1|	-	0.033	13.7	0.1	1.4	8.4	0.0	2.2	2	0	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
DDE_Tnp_4	PF13359.1	gi|118576279|ref|YP_876022.1|	-	9.7e-14	51.2	0.0	1.1e-13	51.0	0.0	1.1	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
PolyA_pol_RNAbd	PF12627.2	gi|118576279|ref|YP_876022.1|	-	0.0017	17.8	0.0	0.52	9.9	0.0	2.3	2	0	0	2	2	2	2	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
DDE_Tnp_1	PF01609.16	gi|118576279|ref|YP_876022.1|	-	0.05	13.1	0.7	0.059	12.9	0.5	1.3	1	1	0	1	1	1	0	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|118576279|ref|YP_876022.1|	-	0.055	13.6	0.1	0.085	13.0	0.1	1.3	1	0	0	1	1	1	0	Transposase	DDE	domain
Mrr_cat_2	PF13156.1	gi|118576280|ref|YP_876023.1|	-	4.1e-12	46.1	0.1	5.5e-12	45.6	0.1	1.2	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat	PF04471.7	gi|118576280|ref|YP_876023.1|	-	8.7e-06	25.5	0.0	1.3e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
Hjc	PF01870.13	gi|118576280|ref|YP_876023.1|	-	0.0047	16.4	0.0	0.008	15.7	0.0	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
DDE_Tnp_IS66	PF03050.9	gi|118576281|ref|YP_876024.1|	-	0.055	12.6	0.0	0.07	12.3	0.0	1.1	1	0	0	1	1	1	0	Transposase	IS66	family
TraA	PF05513.6	gi|118576290|ref|YP_876033.1|	-	0.053	13.6	0.2	0.75	9.9	0.0	2.1	2	0	0	2	2	2	0	TraA
Phage_integrase	PF00589.17	gi|118576293|ref|YP_876036.1|	-	1e-08	35.0	0.0	2.5e-08	33.8	0.0	1.6	1	0	0	1	1	1	1	Phage	integrase	family
ResIII	PF04851.10	gi|118576297|ref|YP_876040.1|	-	4.4e-12	46.2	0.0	9.4e-12	45.1	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|118576297|ref|YP_876040.1|	-	5.4e-06	26.0	0.0	0.02	14.4	0.0	2.3	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118576297|ref|YP_876040.1|	-	0.00063	19.5	0.0	0.0015	18.3	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
N6_N4_Mtase	PF01555.13	gi|118576298|ref|YP_876041.1|	-	7.3e-41	140.1	0.0	1.6e-40	139.0	0.0	1.6	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576298|ref|YP_876041.1|	-	0.00071	19.5	0.0	0.03	14.3	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118576298|ref|YP_876041.1|	-	0.0053	16.1	0.0	0.2	11.0	0.0	2.5	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
HDNR	PF15115.1	gi|118576298|ref|YP_876041.1|	-	0.04	13.8	0.3	4.4	7.1	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	with	conserved	HDNR	motif
MethyltransfD12	PF02086.10	gi|118576298|ref|YP_876041.1|	-	0.24	10.8	4.4	1.4	8.3	0.1	3.1	4	0	0	4	4	4	0	D12	class	N6	adenine-specific	DNA	methyltransferase
D5_N	PF08706.6	gi|118576298|ref|YP_876041.1|	-	0.27	11.2	5.2	0.73	9.9	0.6	2.9	3	0	0	3	3	3	0	D5	N	terminal	like
DUF4475	PF14753.1	gi|118576299|ref|YP_876042.1|	-	0.004	16.6	1.8	0.0054	16.2	1.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4475)
CHD5	PF04420.9	gi|118576302|ref|YP_876045.1|	-	0.19	11.3	0.0	0.28	10.8	0.0	1.2	1	0	0	1	1	1	0	CHD5-like	protein
DDE_Tnp_4	PF13359.1	gi|118576304|ref|YP_876047.1|	-	0.027	14.0	0.0	0.036	13.6	0.0	1.2	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
HHH_5	PF14520.1	gi|118576306|ref|YP_876049.1|	-	2.2e-07	30.9	0.0	4.9e-07	29.8	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|118576306|ref|YP_876049.1|	-	9.7e-07	28.5	0.0	2.9e-06	27.0	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
RNA_pol_A_CTD	PF03118.10	gi|118576306|ref|YP_876049.1|	-	0.00015	21.1	0.2	0.00047	19.5	0.1	1.9	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
HHH	PF00633.18	gi|118576306|ref|YP_876049.1|	-	0.00016	21.1	0.0	0.00035	20.0	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|118576306|ref|YP_876049.1|	-	0.072	13.2	0.0	0.19	11.9	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
HTH_IclR	PF09339.5	gi|118576307|ref|YP_876050.1|	-	0.00071	19.1	0.0	0.0035	16.8	0.0	2.1	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_23	PF13384.1	gi|118576307|ref|YP_876050.1|	-	0.0035	16.9	0.1	0.012	15.2	0.0	1.9	1	0	0	1	1	1	1	Homeodomain-like	domain
FaeA	PF04703.7	gi|118576307|ref|YP_876050.1|	-	0.014	15.5	0.0	0.026	14.6	0.0	1.4	1	0	0	1	1	1	0	FaeA-like	protein
HTH_Crp_2	PF13545.1	gi|118576307|ref|YP_876050.1|	-	0.06	13.1	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF4423	PF14394.1	gi|118576308|ref|YP_876051.1|	-	0.039	13.5	0.0	0.083	12.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DUF262	PF03235.9	gi|118576310|ref|YP_876053.1|	-	3.7e-34	118.6	0.1	9.2e-34	117.3	0.1	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF262
DUF1524	PF07510.6	gi|118576310|ref|YP_876053.1|	-	5.7e-26	91.0	1.4	1e-25	90.2	0.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1524)
zf-FCS	PF06467.9	gi|118576312|ref|YP_876055.1|	-	0.032	13.8	0.1	0.036	13.6	0.0	1.2	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
PyrI_C	PF02748.10	gi|118576312|ref|YP_876055.1|	-	0.093	12.1	2.9	0.14	11.6	1.5	1.6	1	1	1	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
NPV_P10	PF05531.7	gi|118576313|ref|YP_876056.1|	-	1.5e-05	25.1	0.6	3.1	8.1	0.0	6.1	3	2	0	4	4	4	1	Nucleopolyhedrovirus	P10	protein
Reo_sigmaC	PF04582.7	gi|118576313|ref|YP_876056.1|	-	0.00011	21.5	2.0	0.15	11.1	0.1	3.5	3	1	0	3	3	3	2	Reovirus	sigma	C	capsid	protein
PilJ	PF13675.1	gi|118576313|ref|YP_876056.1|	-	0.002	18.4	4.7	0.9	9.8	0.0	5.1	2	2	3	5	5	5	1	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Spectrin	PF00435.16	gi|118576313|ref|YP_876056.1|	-	0.02	15.1	2.8	81	3.5	0.0	5.0	2	1	3	6	6	6	0	Spectrin	repeat
COG5	PF10392.4	gi|118576313|ref|YP_876056.1|	-	0.029	14.3	0.3	4.2	7.3	0.0	3.2	3	0	0	3	3	3	0	Golgi	transport	complex	subunit	5
NBP1	PF08537.5	gi|118576313|ref|YP_876056.1|	-	0.2	10.8	5.2	0.4	9.8	3.6	1.5	1	0	0	1	1	1	0	Fungal	Nap	binding	protein	NBP1
T2SF	PF00482.18	gi|118576313|ref|YP_876056.1|	-	2.4	8.1	8.3	0.75	9.7	0.5	3.7	3	2	2	5	5	5	0	Type	II	secretion	system	(T2SS),	protein	F
HpaP	PF09483.5	gi|118576313|ref|YP_876056.1|	-	3.5	7.5	17.2	0.5	10.2	7.5	2.4	2	0	0	2	2	2	0	Type	III	secretion	protein	(HpaP)
DUF3708	PF12501.3	gi|118576313|ref|YP_876056.1|	-	5.6	6.7	10.2	0.27	11.0	0.2	3.5	2	2	2	4	4	4	0	Phosphate	ATP-binding	cassette	transporter
Glyco_tranf_2_3	PF13641.1	gi|118576315|ref|YP_876058.1|	-	6.3e-41	140.6	0.2	8.5e-41	140.2	0.2	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|118576315|ref|YP_876058.1|	-	4.9e-23	81.8	0.2	8.8e-23	81.0	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|118576315|ref|YP_876058.1|	-	2.4e-18	66.4	0.0	3.5e-18	65.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|118576315|ref|YP_876058.1|	-	2.9e-14	52.7	0.3	6.3e-14	51.6	0.1	1.6	1	1	1	2	2	2	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|118576315|ref|YP_876058.1|	-	0.0039	15.5	1.2	0.0082	14.5	0.0	1.8	2	0	0	2	2	2	1	Cellulose	synthase
Glyco_tranf_2_2	PF10111.4	gi|118576315|ref|YP_876058.1|	-	0.0047	16.0	0.0	0.0082	15.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Fer4	PF00037.22	gi|118576316|ref|YP_876059.1|	-	8.2e-10	37.8	16.1	3.9e-06	26.2	2.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|118576316|ref|YP_876059.1|	-	1.6e-08	34.8	5.8	3.1e-08	33.8	4.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|118576316|ref|YP_876059.1|	-	1.6e-07	30.9	5.1	2.9e-07	30.1	3.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|118576316|ref|YP_876059.1|	-	3.3e-07	30.4	5.8	7.7e-07	29.2	4.0	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|118576316|ref|YP_876059.1|	-	8.7e-06	25.5	3.9	1.4e-05	24.8	2.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|118576316|ref|YP_876059.1|	-	2.1e-05	24.8	2.5	0.21	12.0	0.0	2.8	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|118576316|ref|YP_876059.1|	-	2.7e-05	23.8	15.8	0.0005	19.8	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|118576316|ref|YP_876059.1|	-	3.6e-05	23.4	12.2	0.00066	19.4	0.7	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|118576316|ref|YP_876059.1|	-	8.5e-05	22.5	5.7	0.049	13.9	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|118576316|ref|YP_876059.1|	-	0.0002	21.3	4.2	0.0008	19.3	3.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|118576316|ref|YP_876059.1|	-	0.0059	17.0	15.6	0.12	12.9	1.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|118576316|ref|YP_876059.1|	-	0.0064	17.0	10.0	0.041	14.4	0.5	3.1	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|118576316|ref|YP_876059.1|	-	0.058	13.7	5.0	3.5	8.0	0.0	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|118576316|ref|YP_876059.1|	-	0.16	12.7	8.7	3.1	8.5	1.9	2.9	3	0	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Na_H_Exchanger	PF00999.16	gi|118576319|ref|YP_876062.1|	-	1.3e-60	205.0	58.6	1.5e-60	204.7	40.6	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
PsbH	PF00737.15	gi|118576319|ref|YP_876062.1|	-	0.022	14.3	1.2	0.022	14.3	0.8	2.7	2	0	0	2	2	2	0	Photosystem	II	10	kDa	phosphoprotein
UvrD-helicase	PF00580.16	gi|118576323|ref|YP_876066.1|	-	1.3e-41	142.9	0.0	4.8e-23	81.9	0.1	2.2	1	1	0	2	2	2	2	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.1	gi|118576323|ref|YP_876066.1|	-	4.2e-28	98.8	0.0	4.8e-13	49.2	0.0	2.4	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
PDDEXK_1	PF12705.2	gi|118576323|ref|YP_876066.1|	-	2.1e-15	56.7	0.0	3.4e-15	56.1	0.0	1.4	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
UvrD_C_2	PF13538.1	gi|118576323|ref|YP_876066.1|	-	1.6e-09	37.8	0.0	1.5e-08	34.7	0.0	2.7	2	1	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.1	gi|118576323|ref|YP_876066.1|	-	1.3e-08	34.4	0.0	3.6e-08	33.0	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
Cas_Cas4	PF01930.12	gi|118576323|ref|YP_876066.1|	-	0.0035	17.2	0.0	0.0063	16.4	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
AAA_30	PF13604.1	gi|118576323|ref|YP_876066.1|	-	0.0056	16.2	0.0	0.64	9.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
Ribosomal_L16	PF00252.13	gi|118576324|ref|YP_876067.1|	-	3e-26	91.7	0.8	3.9e-26	91.3	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
tRNA_int_endo	PF01974.12	gi|118576325|ref|YP_876068.1|	-	5e-17	61.4	0.1	8.1e-17	60.7	0.1	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|118576325|ref|YP_876068.1|	-	1.1e-13	50.4	1.8	6.4e-13	48.0	0.2	2.2	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.2	gi|118576325|ref|YP_876068.1|	-	0.046	13.1	0.1	0.084	12.3	0.1	1.4	1	0	0	1	1	1	0	tRNA-splicing	endonuclease	subunit	sen54	N-term
PLDc_2	PF13091.1	gi|118576326|ref|YP_876069.1|	-	6.8e-06	25.8	0.2	9.4e-06	25.3	0.1	1.2	1	0	0	1	1	1	1	PLD-like	domain
Avidin	PF01382.12	gi|118576326|ref|YP_876069.1|	-	0.063	13.5	0.0	0.1	12.8	0.0	1.2	1	0	0	1	1	1	0	Avidin	family
SIMPL	PF04402.9	gi|118576327|ref|YP_876070.1|	-	5.7e-41	140.6	2.6	6.9e-41	140.4	1.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF541)
DUF1454	PF07305.7	gi|118576327|ref|YP_876070.1|	-	0.13	11.3	0.0	0.66	9.0	0.0	1.9	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1454)
AIRC	PF00731.15	gi|118576329|ref|YP_876072.1|	-	2.1e-58	195.8	1.2	2.5e-58	195.6	0.8	1.0	1	0	0	1	1	1	1	AIR	carboxylase
GCV_H	PF01597.14	gi|118576335|ref|YP_876078.1|	-	0.12	12.0	0.0	0.18	11.4	0.0	1.2	1	0	0	1	1	1	0	Glycine	cleavage	H-protein
DUF385	PF04075.9	gi|118576336|ref|YP_876079.1|	-	6.2e-09	35.9	0.1	7e-09	35.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF385)
DUF2255	PF10012.4	gi|118576336|ref|YP_876079.1|	-	0.0067	16.3	0.0	0.0079	16.1	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2255)
PRC	PF05239.11	gi|118576337|ref|YP_876080.1|	-	3.3e-10	39.6	0.6	2e-05	24.3	0.0	2.1	2	0	0	2	2	2	2	PRC-barrel	domain
MCE	PF02470.15	gi|118576337|ref|YP_876080.1|	-	0.0014	18.5	0.2	1.9	8.5	0.0	2.1	2	0	0	2	2	2	2	mce	related	protein
DUF3659	PF12396.3	gi|118576337|ref|YP_876080.1|	-	0.068	12.8	0.4	6.2	6.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3659)
N6_N4_Mtase	PF01555.13	gi|118576338|ref|YP_876081.1|	-	1.9e-12	47.2	0.0	7.4e-11	41.9	0.0	2.1	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576338|ref|YP_876081.1|	-	0.031	14.3	0.0	0.48	10.4	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
AIRS_C	PF02769.17	gi|118576339|ref|YP_876082.1|	-	8.7e-23	81.0	0.0	1.5e-22	80.2	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|118576339|ref|YP_876082.1|	-	3e-16	59.4	3.1	6e-16	58.4	2.1	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Na_H_Exchanger	PF00999.16	gi|118576340|ref|YP_876083.1|	-	5.7e-65	219.3	54.4	7.3e-65	218.9	37.7	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
PspB	PF06667.7	gi|118576340|ref|YP_876083.1|	-	0.44	10.5	2.6	0.46	10.4	0.1	2.3	2	0	0	2	2	2	0	Phage	shock	protein	B
SGL	PF08450.7	gi|118576342|ref|YP_876085.1|	-	4.3e-22	78.6	8.7	0.0015	17.9	0.0	17.7	16	4	1	18	18	18	4	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576342|ref|YP_876085.1|	-	5.9e-22	78.2	0.0	0.00016	20.9	0.0	10.4	8	5	2	10	10	10	6	Lactonase,	7-bladed	beta-propeller
Arylesterase	PF01731.15	gi|118576342|ref|YP_876085.1|	-	1.6e-09	37.6	0.0	7.3	6.6	0.0	9.9	11	0	0	11	11	11	3	Arylesterase
Str_synth	PF03088.11	gi|118576342|ref|YP_876085.1|	-	1.2e-08	34.9	0.0	4.7	7.3	0.0	12.1	17	0	0	17	17	17	1	Strictosidine	synthase
Glu_cyclase_2	PF05096.7	gi|118576342|ref|YP_876085.1|	-	0.15	11.0	0.0	1.9e+02	0.8	0.0	5.5	8	0	0	8	8	8	0	Glutamine	cyclotransferase
SBP56	PF05694.6	gi|118576342|ref|YP_876085.1|	-	0.17	10.3	0.2	80	1.5	0.0	4.9	5	0	0	5	5	5	0	56kDa	selenium	binding	protein	(SBP56)
AAA_13	PF13166.1	gi|118576343|ref|YP_876086.1|	-	0.15	10.4	14.7	0.18	10.1	10.2	1.0	1	0	0	1	1	1	0	AAA	domain
Atg14	PF10186.4	gi|118576343|ref|YP_876086.1|	-	0.18	10.6	12.0	0.24	10.2	8.3	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
KGG	PF10685.4	gi|118576343|ref|YP_876086.1|	-	7.5	6.6	9.6	4.3	7.4	0.7	3.4	2	0	0	2	2	2	0	Stress-induced	bacterial	acidophilic	repeat	motif
Radical_SAM	PF04055.16	gi|118576344|ref|YP_876087.1|	-	5.3e-20	72.2	0.1	4.3e-19	69.2	0.0	2.4	2	1	1	3	3	3	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|118576344|ref|YP_876087.1|	-	0.0002	21.3	0.1	0.0018	18.2	0.0	2.6	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	family
UCR_UQCRX_QCR9	PF05365.7	gi|118576344|ref|YP_876087.1|	-	0.019	14.5	0.0	0.05	13.2	0.0	1.7	2	0	0	2	2	2	0	Ubiquinol-cytochrome	C	reductase,	UQCRX/QCR9	like
Acetyltransf_10	PF13673.1	gi|118576344|ref|YP_876087.1|	-	0.024	14.7	0.0	0.1	12.6	0.0	2.2	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
tRNA-synt_1f	PF01921.13	gi|118576345|ref|YP_876088.1|	-	1.6e-111	372.5	0.0	2e-111	372.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
PolyA_pol_RNAbd	PF12627.2	gi|118576345|ref|YP_876088.1|	-	0.0017	17.8	0.0	0.02	14.4	0.0	2.5	2	0	0	2	2	2	1	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
tRNA-synt_1	PF00133.17	gi|118576345|ref|YP_876088.1|	-	0.048	11.6	0.0	0.07	11.1	0.0	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Zn_ribbon_recom	PF13408.1	gi|118576345|ref|YP_876088.1|	-	0.052	13.8	1.8	0.1	12.8	1.2	1.4	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
tRNA-synt_1g	PF09334.6	gi|118576345|ref|YP_876088.1|	-	0.18	10.4	0.5	0.32	9.6	0.0	1.7	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(M)
TPR_MLP1_2	PF07926.7	gi|118576347|ref|YP_876090.1|	-	1.8e-05	24.4	19.3	0.0016	18.1	1.7	3.1	1	1	1	2	2	2	2	TPR/MLP1/MLP2-like	protein
MscS_porin	PF12795.2	gi|118576347|ref|YP_876090.1|	-	0.00018	20.9	11.3	0.097	11.9	0.1	3.2	1	1	2	3	3	3	3	Mechanosensitive	ion	channel	porin	domain
Spc7	PF08317.6	gi|118576347|ref|YP_876090.1|	-	0.0006	18.5	14.6	0.083	11.5	4.9	2.4	1	1	2	3	3	3	3	Spc7	kinetochore	protein
Laminin_II	PF06009.7	gi|118576347|ref|YP_876090.1|	-	0.00082	19.1	10.4	0.0084	15.8	0.8	2.9	2	1	1	3	3	3	2	Laminin	Domain	II
AAA_13	PF13166.1	gi|118576347|ref|YP_876090.1|	-	0.0037	15.8	6.6	0.0047	15.4	4.6	1.2	1	0	0	1	1	1	1	AAA	domain
FliJ	PF02050.11	gi|118576347|ref|YP_876090.1|	-	0.0088	16.0	18.5	0.14	12.2	2.5	3.2	1	1	1	3	3	3	1	Flagellar	FliJ	protein
IncA	PF04156.9	gi|118576347|ref|YP_876090.1|	-	0.014	14.9	19.6	0.061	12.9	4.5	2.5	1	1	1	2	2	2	0	IncA	protein
Atg14	PF10186.4	gi|118576347|ref|YP_876090.1|	-	0.034	13.0	17.1	0.011	14.6	3.3	2.3	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
CENP-F_leu_zip	PF10473.4	gi|118576347|ref|YP_876090.1|	-	0.14	12.0	22.8	5.4	6.8	1.6	3.3	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Tup_N	PF08581.5	gi|118576347|ref|YP_876090.1|	-	0.14	12.3	3.4	6.8	6.9	0.6	3.0	2	0	0	2	2	2	0	Tup	N-terminal
DUF2968	PF11180.3	gi|118576347|ref|YP_876090.1|	-	0.26	10.6	16.4	0.1	11.9	4.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
Seryl_tRNA_N	PF02403.17	gi|118576347|ref|YP_876090.1|	-	0.28	11.2	19.9	0.17	11.9	3.4	3.2	1	1	2	3	3	3	0	Seryl-tRNA	synthetase	N-terminal	domain
GAS	PF13851.1	gi|118576347|ref|YP_876090.1|	-	0.29	10.2	17.0	0.092	11.9	4.6	2.9	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Spectrin	PF00435.16	gi|118576347|ref|YP_876090.1|	-	0.3	11.3	13.2	0.14	12.4	1.3	3.3	1	1	3	4	4	4	0	Spectrin	repeat
Tropomyosin	PF00261.15	gi|118576347|ref|YP_876090.1|	-	0.33	10.0	30.3	67	2.4	20.9	2.9	1	1	0	1	1	1	0	Tropomyosin
Mod_r	PF07200.8	gi|118576347|ref|YP_876090.1|	-	0.47	10.3	14.7	0.53	10.1	1.4	2.9	2	1	1	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
bZIP_1	PF00170.16	gi|118576347|ref|YP_876090.1|	-	0.78	9.7	8.4	0.21	11.5	0.3	3.4	3	1	1	4	4	3	0	bZIP	transcription	factor
DUF4558	PF15104.1	gi|118576347|ref|YP_876090.1|	-	0.9	9.5	9.4	0.087	12.7	1.5	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4558)
APG6	PF04111.7	gi|118576347|ref|YP_876090.1|	-	1.1	8.2	15.2	0.32	10.0	3.7	2.2	1	1	1	2	2	2	0	Autophagy	protein	Apg6
Reo_sigmaC	PF04582.7	gi|118576347|ref|YP_876090.1|	-	1.1	8.3	4.7	3.7	6.6	1.0	2.1	1	1	1	2	2	2	0	Reovirus	sigma	C	capsid	protein
WEMBL	PF05701.6	gi|118576347|ref|YP_876090.1|	-	1.1	7.6	32.2	3.2	6.1	9.5	2.9	1	1	1	2	2	2	0	Weak	chloroplast	movement	under	blue	light
Fez1	PF06818.10	gi|118576347|ref|YP_876090.1|	-	1.2	9.1	24.8	0.51	10.3	3.0	2.1	1	1	1	2	2	2	0	Fez1
DUF3552	PF12072.3	gi|118576347|ref|YP_876090.1|	-	1.4	8.0	26.5	0.21	10.7	7.3	3.4	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF3552)
Mnd1	PF03962.10	gi|118576347|ref|YP_876090.1|	-	1.8	8.1	20.2	1.6	8.3	1.6	3.0	1	1	2	3	3	3	0	Mnd1	family
IFT57	PF10498.4	gi|118576347|ref|YP_876090.1|	-	2.2	6.9	11.0	1.1	7.8	1.0	2.8	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
Snapin_Pallidin	PF14712.1	gi|118576347|ref|YP_876090.1|	-	4.8	7.5	7.6	3.1	8.1	0.8	3.1	1	1	0	2	2	2	0	Snapin/Pallidin
BRE1	PF08647.6	gi|118576347|ref|YP_876090.1|	-	5.4	7.0	13.4	1.6	8.7	0.5	3.3	2	2	1	3	3	3	0	BRE1	E3	ubiquitin	ligase
ADIP	PF11559.3	gi|118576347|ref|YP_876090.1|	-	9.2	6.1	16.2	2.2	8.1	3.6	2.8	1	1	2	3	3	3	0	Afadin-	and	alpha	-actinin-Binding
Flagellin_N	PF00669.15	gi|118576347|ref|YP_876090.1|	-	9.3	6.0	9.5	13	5.5	3.4	2.7	1	1	2	3	3	3	0	Bacterial	flagellin	N-terminal	helical	region
Pyridox_oxidase	PF01243.15	gi|118576348|ref|YP_876091.1|	-	4.3e-13	49.0	0.0	5.5e-13	48.7	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
SLR1-BP	PF07333.7	gi|118576349|ref|YP_876092.1|	-	0.32	11.2	9.1	0.36	11.0	6.3	1.2	1	0	0	1	1	1	0	S	locus-related	glycoprotein	1	binding	pollen	coat	protein	(SLR1-BP)
PGC7_Stella	PF15549.1	gi|118576349|ref|YP_876092.1|	-	0.9	9.5	4.3	0.95	9.4	3.0	1.1	1	0	0	1	1	1	0	PGC7/Stella/Dppa3	domain
SDH_sah	PF01972.11	gi|118576353|ref|YP_876096.1|	-	1.7e-14	53.3	0.1	3.7e-12	45.6	0.0	2.2	2	0	0	2	2	2	2	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.18	gi|118576353|ref|YP_876096.1|	-	1.5e-05	24.7	0.1	3.2e-05	23.6	0.1	1.5	1	0	0	1	1	1	1	Clp	protease
Aminotran_3	PF00202.16	gi|118576354|ref|YP_876097.1|	-	2.2e-49	168.1	0.0	3.1e-49	167.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
TPR_11	PF13414.1	gi|118576355|ref|YP_876098.1|	-	1.4e-28	98.3	19.4	1e-11	44.2	1.7	4.5	1	1	3	5	5	5	5	TPR	repeat
TPR_1	PF00515.23	gi|118576355|ref|YP_876098.1|	-	5.1e-28	95.4	11.1	6.1e-06	25.6	0.5	7.2	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|118576355|ref|YP_876098.1|	-	1.5e-25	87.0	18.0	0.00068	19.3	0.5	7.6	8	0	0	8	8	8	6	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118576355|ref|YP_876098.1|	-	7.3e-23	80.6	18.0	3.7e-06	27.4	1.9	5.7	2	2	4	6	6	6	5	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118576355|ref|YP_876098.1|	-	3.8e-21	73.4	4.4	4.1e-06	26.5	0.0	6.5	7	0	0	7	7	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118576355|ref|YP_876098.1|	-	2.9e-19	69.1	8.1	5.1e-05	23.5	0.3	4.4	2	2	2	4	4	4	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118576355|ref|YP_876098.1|	-	6.8e-19	67.5	12.9	1.2e-06	28.3	0.9	5.1	1	1	4	5	5	5	5	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118576355|ref|YP_876098.1|	-	1.2e-18	65.4	4.1	0.0028	17.3	0.1	6.2	5	1	1	6	6	6	4	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118576355|ref|YP_876098.1|	-	1.8e-18	65.3	15.5	0.033	14.7	1.1	7.5	1	1	7	8	8	8	6	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118576355|ref|YP_876098.1|	-	2.7e-15	55.6	1.5	1	9.9	0.0	7.3	7	1	1	8	8	8	4	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118576355|ref|YP_876098.1|	-	7.8e-15	53.4	4.5	0.053	13.3	0.0	6.5	7	0	0	7	7	6	4	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118576355|ref|YP_876098.1|	-	1.5e-12	47.1	11.5	8.6e-06	25.5	0.2	4.8	2	1	4	6	6	6	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|118576355|ref|YP_876098.1|	-	1.7e-11	44.0	0.1	0.0038	17.3	0.0	3.4	2	1	2	4	4	4	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_4	PF07721.9	gi|118576355|ref|YP_876098.1|	-	8e-09	35.0	8.9	0.19	12.2	0.9	5.6	5	0	0	5	5	5	1	Tetratricopeptide	repeat
TPR_5	PF12688.2	gi|118576355|ref|YP_876098.1|	-	4.7e-07	29.8	2.1	0.005	16.8	0.0	3.3	1	1	2	3	3	3	1	Tetratrico	peptide	repeat
DUF3856	PF12968.2	gi|118576355|ref|YP_876098.1|	-	8.2e-07	28.9	1.1	1.2	8.9	0.0	4.8	3	2	2	5	5	5	2	Domain	of	Unknown	Function	(DUF3856)
BTAD	PF03704.12	gi|118576355|ref|YP_876098.1|	-	1.3e-06	28.8	9.6	0.07	13.4	1.3	3.6	2	2	0	3	3	3	3	Bacterial	transcriptional	activator	domain
TPR_10	PF13374.1	gi|118576355|ref|YP_876098.1|	-	0.00013	21.7	10.4	3.8	7.5	0.1	5.7	6	0	0	6	6	6	1	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|118576355|ref|YP_876098.1|	-	0.00016	21.7	9.5	1.4	9.1	0.1	4.6	2	2	3	5	5	5	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|118576355|ref|YP_876098.1|	-	0.00018	20.4	0.3	0.24	10.1	0.0	2.8	2	2	0	2	2	2	2	NMDA	receptor-regulated	protein	1
TPR_15	PF13429.1	gi|118576355|ref|YP_876098.1|	-	0.00043	19.4	4.5	0.15	11.0	0.1	3.1	1	1	1	3	3	3	2	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|118576355|ref|YP_876098.1|	-	0.004	17.0	0.5	2	8.3	0.0	3.9	4	1	1	5	5	4	1	Fis1	C-terminal	tetratricopeptide	repeat
PPR	PF01535.15	gi|118576355|ref|YP_876098.1|	-	0.0095	15.8	1.2	4.2	7.5	0.1	3.9	4	0	0	4	4	3	1	PPR	repeat
HEAT_2	PF13646.1	gi|118576355|ref|YP_876098.1|	-	0.013	15.7	1.7	0.12	12.6	0.9	2.6	1	1	0	1	1	1	0	HEAT	repeats
Coatomer_E	PF04733.9	gi|118576355|ref|YP_876098.1|	-	0.02	14.0	0.0	0.71	9.0	0.0	2.1	2	0	0	2	2	2	0	Coatomer	epsilon	subunit
MIT	PF04212.13	gi|118576355|ref|YP_876098.1|	-	0.043	13.7	9.3	16	5.4	0.9	5.0	4	1	0	4	4	4	0	MIT	(microtubule	interacting	and	transport)	domain
Alkyl_sulf_dimr	PF14863.1	gi|118576355|ref|YP_876098.1|	-	0.083	13.1	0.4	5.7	7.1	0.1	2.7	2	1	1	3	3	3	0	Alkyl	sulfatase	dimerisation
SHOCT	PF09851.4	gi|118576357|ref|YP_876100.1|	-	3.8e-09	35.7	4.8	1.3e-08	34.0	3.3	2.0	1	0	0	1	1	1	1	Short	C-terminal	domain
DUF1707	PF08044.6	gi|118576357|ref|YP_876100.1|	-	0.0045	16.7	1.6	0.43	10.3	0.1	2.6	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF1707)
DUF3015	PF11220.3	gi|118576357|ref|YP_876100.1|	-	0.11	12.0	0.1	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3015)
DMAP_binding	PF06464.6	gi|118576357|ref|YP_876100.1|	-	0.11	13.0	1.0	0.11	13.0	0.7	2.0	2	0	0	2	2	2	0	DMAP1-binding	Domain
Ribosomal_S11	PF00411.14	gi|118576357|ref|YP_876100.1|	-	1.4	9.1	3.7	5.4	7.2	0.1	2.1	1	1	1	2	2	2	0	Ribosomal	protein	S11
Cupin_2	PF07883.6	gi|118576358|ref|YP_876101.1|	-	1.8e-06	27.3	0.1	4.7e-05	22.7	0.1	2.2	1	1	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|118576358|ref|YP_876101.1|	-	0.0015	17.9	0.0	0.0019	17.6	0.0	1.1	1	0	0	1	1	1	1	Cupin
Auxin_BP	PF02041.11	gi|118576358|ref|YP_876101.1|	-	0.014	14.8	0.0	0.015	14.7	0.0	1.1	1	0	0	1	1	1	0	Auxin	binding	protein
DUF552	PF04472.7	gi|118576358|ref|YP_876101.1|	-	0.062	13.2	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF552)
AraC_binding	PF02311.14	gi|118576358|ref|YP_876101.1|	-	0.14	11.8	0.1	0.34	10.5	0.0	1.7	1	1	1	2	2	2	0	AraC-like	ligand	binding	domain
BCNT	PF07572.7	gi|118576360|ref|YP_876103.1|	-	0.023	14.6	0.1	0.042	13.7	0.1	1.5	1	0	0	1	1	1	0	Bucentaur	or	craniofacial	development
ParBc	PF02195.13	gi|118576361|ref|YP_876104.1|	-	8.8e-17	61.0	0.0	1.7e-16	60.0	0.0	1.5	1	0	0	1	1	1	1	ParB-like	nuclease	domain
Ribophorin_II	PF05817.9	gi|118576361|ref|YP_876104.1|	-	0.019	13.2	0.0	0.022	12.9	0.0	1.1	1	0	0	1	1	1	0	Oligosaccharyltransferase	subunit	Ribophorin	II
HTH_AsnC-type	PF13404.1	gi|118576361|ref|YP_876104.1|	-	0.032	13.7	0.2	1.1	8.7	0.1	3.2	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
HTH_28	PF13518.1	gi|118576361|ref|YP_876104.1|	-	0.073	13.0	1.8	12	6.0	0.0	3.4	3	0	0	3	3	3	0	Helix-turn-helix	domain
TIM	PF00121.13	gi|118576362|ref|YP_876105.1|	-	1.5e-29	102.8	0.0	2.7e-20	72.4	0.0	2.0	1	1	1	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|118576362|ref|YP_876105.1|	-	0.00014	20.9	0.4	0.00022	20.3	0.2	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|118576362|ref|YP_876105.1|	-	0.0027	16.7	0.0	0.0035	16.4	0.0	1.3	1	1	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
FMN_dh	PF01070.13	gi|118576362|ref|YP_876105.1|	-	0.016	14.0	0.7	0.025	13.4	0.5	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|118576362|ref|YP_876105.1|	-	0.064	12.5	0.1	0.1	11.8	0.0	1.3	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Trp_syntA	PF00290.15	gi|118576362|ref|YP_876105.1|	-	0.13	10.7	0.1	0.19	10.2	0.1	1.2	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
TBP	PF00352.16	gi|118576363|ref|YP_876106.1|	-	1.3e-24	85.3	0.0	4e-17	61.3	0.0	2.1	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
MtN3_slv	PF03083.11	gi|118576364|ref|YP_876107.1|	-	1.1e-08	34.8	1.8	1.2e-08	34.7	1.3	1.1	1	0	0	1	1	1	1	Sugar	efflux	transporter	for	intercellular	exchange
PQ-loop	PF04193.9	gi|118576364|ref|YP_876107.1|	-	0.008	15.7	0.5	0.008	15.7	0.3	1.8	2	1	0	2	2	2	1	PQ	loop	repeat
Borrelia_P13	PF05628.7	gi|118576364|ref|YP_876107.1|	-	0.048	13.4	1.3	0.29	10.9	0.2	1.9	1	1	1	2	2	2	0	Borrelia	membrane	protein	P13
Claudin_2	PF13903.1	gi|118576364|ref|YP_876107.1|	-	0.15	11.7	2.1	0.27	10.9	1.5	1.4	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DNA_pol_B	PF00136.16	gi|118576365|ref|YP_876108.1|	-	2e-87	293.9	1.8	2.6e-87	293.5	1.3	1.1	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|118576365|ref|YP_876108.1|	-	8.7e-56	189.1	0.0	1.4e-55	188.4	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|118576365|ref|YP_876108.1|	-	0.00028	20.7	0.0	0.00064	19.5	0.0	1.7	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|118576365|ref|YP_876108.1|	-	0.00077	19.0	0.0	0.0019	17.7	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
dCMP_cyt_deam_1	PF00383.17	gi|118576366|ref|YP_876109.1|	-	3.7e-20	71.4	2.3	5e-20	71.0	1.6	1.2	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
APOBEC_N	PF08210.6	gi|118576366|ref|YP_876109.1|	-	0.024	14.2	0.2	0.028	14.0	0.1	1.3	1	0	0	1	1	1	0	APOBEC-like	N-terminal	domain
MafB19-deam	PF14437.1	gi|118576366|ref|YP_876109.1|	-	0.11	12.0	0.5	0.19	11.3	0.3	1.5	2	0	0	2	2	2	0	MafB19-like	deaminase
Neocarzinostat	PF00960.13	gi|118576366|ref|YP_876109.1|	-	0.18	11.7	2.3	6.7	6.6	0.2	2.6	1	1	2	3	3	3	0	Neocarzinostatin	family
Helicase_C	PF00271.26	gi|118576367|ref|YP_876110.1|	-	4.6e-20	71.2	0.1	1e-19	70.1	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|118576367|ref|YP_876110.1|	-	1.4e-19	70.2	0.0	1.4e-18	66.9	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|118576367|ref|YP_876110.1|	-	2.2e-14	53.7	0.0	2.4e-13	50.3	0.0	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|118576367|ref|YP_876110.1|	-	3.9e-06	26.5	0.9	7.8e-05	22.3	0.1	2.8	2	0	0	2	2	2	1	Part	of	AAA	domain
Flavi_DEAD	PF07652.9	gi|118576367|ref|YP_876110.1|	-	0.0087	15.8	0.0	0.025	14.3	0.0	1.8	1	1	0	1	1	1	1	Flavivirus	DEAD	domain
SNF2_N	PF00176.18	gi|118576367|ref|YP_876110.1|	-	0.015	14.1	0.0	0.023	13.5	0.0	1.2	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
DUF2075	PF09848.4	gi|118576367|ref|YP_876110.1|	-	0.048	12.6	0.0	0.077	11.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Rotamase	PF00639.16	gi|118576368|ref|YP_876111.1|	-	5.7e-26	91.0	0.0	6.7e-26	90.8	0.0	1.1	1	0	0	1	1	1	1	PPIC-type	PPIASE	domain
Rotamase_3	PF13616.1	gi|118576368|ref|YP_876111.1|	-	8.6e-25	87.2	0.0	1.1e-24	86.9	0.0	1.1	1	0	0	1	1	1	1	PPIC-type	PPIASE	domain
Rotamase_2	PF13145.1	gi|118576368|ref|YP_876111.1|	-	2.1e-11	44.4	0.0	2.3e-11	44.3	0.0	1.0	1	0	0	1	1	1	1	PPIC-type	PPIASE	domain
DUF2203	PF09969.4	gi|118576369|ref|YP_876112.1|	-	3.3e-37	127.3	0.1	3.7e-37	127.1	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
UbiA	PF01040.13	gi|118576370|ref|YP_876113.1|	-	3.2e-40	137.9	19.7	4e-40	137.6	13.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
WIYLD	PF10440.4	gi|118576373|ref|YP_876116.1|	-	0.12	12.3	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Ubiquitin-binding	WIYLD	domain
CFC	PF09443.5	gi|118576373|ref|YP_876116.1|	-	0.28	10.8	2.7	2.3	7.9	0.1	2.2	2	0	0	2	2	2	0	Cripto_Frl-1_Cryptic	(CFC)
WIYLD	PF10440.4	gi|118576375|ref|YP_876118.1|	-	0.12	12.3	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Ubiquitin-binding	WIYLD	domain
CFC	PF09443.5	gi|118576375|ref|YP_876118.1|	-	0.28	10.8	2.7	2.3	7.9	0.1	2.2	2	0	0	2	2	2	0	Cripto_Frl-1_Cryptic	(CFC)
Elf1	PF05129.8	gi|118576377|ref|YP_876120.1|	-	0.00055	19.5	0.5	0.00055	19.5	0.4	2.1	2	1	1	3	3	3	1	Transcription	elongation	factor	Elf1	like
Zn_Tnp_IS1	PF03811.8	gi|118576377|ref|YP_876120.1|	-	0.0013	18.1	0.8	0.0013	18.1	0.6	2.0	2	0	0	2	2	2	1	InsA	N-terminal	domain
Zn_Tnp_IS1595	PF12760.2	gi|118576377|ref|YP_876120.1|	-	0.012	15.4	0.6	0.012	15.4	0.4	2.1	2	1	0	2	2	1	0	Transposase	zinc-ribbon	domain
zf-RING_2	PF13639.1	gi|118576377|ref|YP_876120.1|	-	0.013	15.2	1.2	0.013	15.2	0.9	2.2	2	1	1	3	3	3	0	Ring	finger	domain
zf-Sec23_Sec24	PF04810.10	gi|118576377|ref|YP_876120.1|	-	0.016	14.7	4.6	1.2	8.7	0.1	3.2	2	1	1	3	3	3	0	Sec23/Sec24	zinc	finger
ATPase-cat_bd	PF12156.3	gi|118576377|ref|YP_876120.1|	-	0.036	14.6	0.5	0.036	14.6	0.4	2.1	2	0	0	2	2	2	0	Putative	metal-binding	domain	of	cation	transport	ATPase
Sgf11	PF08209.6	gi|118576377|ref|YP_876120.1|	-	0.06	12.6	3.7	20	4.6	0.0	3.4	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-CHY	PF05495.7	gi|118576377|ref|YP_876120.1|	-	0.22	11.7	0.2	0.22	11.7	0.2	2.8	2	1	0	2	2	2	0	CHY	zinc	finger
Thioredoxin_4	PF13462.1	gi|118576377|ref|YP_876120.1|	-	0.31	11.0	3.2	5.1	7.0	0.1	2.4	2	1	0	2	2	2	0	Thioredoxin
PHD	PF00628.24	gi|118576377|ref|YP_876120.1|	-	0.82	9.4	15.2	2	8.1	3.1	3.5	1	1	2	3	3	3	0	PHD-finger
Zn-ribbon_8	PF09723.5	gi|118576377|ref|YP_876120.1|	-	1.5	8.8	10.4	1.6	8.7	1.0	3.6	2	2	1	3	3	3	0	Zinc	ribbon	domain
zf-Di19	PF05605.7	gi|118576377|ref|YP_876120.1|	-	1.8	8.7	6.9	4	7.6	0.1	2.7	3	0	0	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
Aldo_ket_red	PF00248.16	gi|118576379|ref|YP_876122.1|	-	3.2e-33	114.7	0.0	1.4e-32	112.6	0.0	1.8	1	1	0	1	1	1	1	Aldo/keto	reductase	family
DUF321	PF03778.8	gi|118576379|ref|YP_876122.1|	-	0.82	9.1	3.3	0.38	10.2	0.8	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF321)
N6_N4_Mtase	PF01555.13	gi|118576380|ref|YP_876123.1|	-	7.1e-43	146.7	0.0	3.4e-42	144.5	0.0	1.8	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576380|ref|YP_876123.1|	-	4.7e-10	39.5	0.0	0.0011	19.0	0.0	2.3	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576380|ref|YP_876123.1|	-	0.029	13.9	0.0	0.13	11.8	0.0	1.9	2	0	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
DUF1624	PF07786.7	gi|118576381|ref|YP_876124.1|	-	1	8.6	5.9	0.65	9.2	2.9	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1624)
adh_short	PF00106.20	gi|118576382|ref|YP_876125.1|	-	6.2e-27	94.5	3.0	3.2e-22	79.2	0.1	2.9	3	0	0	3	3	3	2	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|118576382|ref|YP_876125.1|	-	2e-18	67.0	0.1	2.1e-11	44.0	0.0	3.1	3	0	0	3	3	3	3	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|118576382|ref|YP_876125.1|	-	2.9e-14	53.1	1.0	2.9e-10	40.1	0.1	2.6	2	0	0	2	2	2	2	KR	domain
Epimerase	PF01370.16	gi|118576382|ref|YP_876125.1|	-	0.021	14.2	0.0	0.076	12.4	0.0	1.9	2	1	0	2	2	2	0	NAD	dependent	epimerase/dehydratase	family
Pyr_redox	PF00070.22	gi|118576382|ref|YP_876125.1|	-	0.044	14.1	0.2	0.21	12.0	0.2	2.2	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|118576382|ref|YP_876125.1|	-	0.051	13.2	1.3	0.14	11.7	0.2	2.1	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Polysacc_synt_2	PF02719.10	gi|118576382|ref|YP_876125.1|	-	0.14	11.0	0.0	0.23	10.3	0.0	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
TauE	PF01925.14	gi|118576383|ref|YP_876126.1|	-	3.5e-46	157.5	46.0	4.3e-46	157.3	31.9	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF192	PF02643.10	gi|118576384|ref|YP_876127.1|	-	4.7e-30	103.4	0.0	7e-30	102.9	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1430
Fe_dep_repress	PF01325.14	gi|118576386|ref|YP_876129.1|	-	1.9e-15	56.5	0.1	2.8e-15	56.0	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.10	gi|118576386|ref|YP_876129.1|	-	3.1e-12	46.0	0.0	4.9e-12	45.3	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
TrmB	PF01978.14	gi|118576386|ref|YP_876129.1|	-	2.9e-05	23.6	0.0	4.6e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|118576386|ref|YP_876129.1|	-	6.9e-05	22.4	0.0	0.00025	20.6	0.0	1.9	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|118576386|ref|YP_876129.1|	-	0.00014	22.1	0.0	0.00073	19.8	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|118576386|ref|YP_876129.1|	-	0.00019	20.7	0.0	0.00057	19.2	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|118576386|ref|YP_876129.1|	-	0.00027	20.5	0.0	0.0006	19.4	0.0	1.5	2	0	0	2	2	2	1	MarR	family
HTH_28	PF13518.1	gi|118576386|ref|YP_876129.1|	-	0.00031	20.6	0.0	0.012	15.5	0.0	2.7	3	0	0	3	3	3	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|118576386|ref|YP_876129.1|	-	0.0021	17.5	0.0	0.01	15.3	0.0	2.0	2	0	0	2	2	2	1	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|118576386|ref|YP_876129.1|	-	0.0048	16.6	0.0	0.011	15.4	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|118576386|ref|YP_876129.1|	-	0.0053	16.3	0.0	0.0083	15.7	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_6	PF01418.12	gi|118576386|ref|YP_876129.1|	-	0.012	15.3	0.0	0.02	14.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
FeoC	PF09012.5	gi|118576386|ref|YP_876129.1|	-	0.016	14.9	0.0	0.025	14.2	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_23	PF13384.1	gi|118576386|ref|YP_876129.1|	-	0.039	13.6	0.0	1.3	8.7	0.0	2.5	3	0	0	3	3	3	0	Homeodomain-like	domain
DUF4423	PF14394.1	gi|118576386|ref|YP_876129.1|	-	0.054	13.0	0.0	0.11	12.0	0.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
FaeA	PF04703.7	gi|118576386|ref|YP_876129.1|	-	0.057	13.5	0.0	0.2	11.8	0.0	1.8	2	0	0	2	2	2	0	FaeA-like	protein
HTH_5	PF01022.15	gi|118576386|ref|YP_876129.1|	-	0.069	12.8	0.0	0.16	11.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_10	PF04967.7	gi|118576386|ref|YP_876129.1|	-	0.074	12.6	0.2	0.41	10.2	0.0	2.2	1	1	1	2	2	2	0	HTH	DNA	binding	domain
Rrf2	PF02082.15	gi|118576386|ref|YP_876129.1|	-	0.082	13.0	0.0	0.17	12.0	0.0	1.6	2	0	0	2	2	1	0	Transcriptional	regulator
HTH_DeoR	PF08220.7	gi|118576386|ref|YP_876129.1|	-	0.085	12.3	0.0	0.49	9.9	0.0	2.3	2	1	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
PAX	PF00292.13	gi|118576386|ref|YP_876129.1|	-	0.11	12.2	0.0	0.18	11.5	0.0	1.4	1	1	0	1	1	1	0	'Paired	box'	domain
GntR	PF00392.16	gi|118576386|ref|YP_876129.1|	-	0.11	11.9	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_12	PF08461.5	gi|118576386|ref|YP_876129.1|	-	0.13	11.9	0.1	0.27	10.9	0.0	1.7	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
T2SE	PF00437.15	gi|118576387|ref|YP_876130.1|	-	3.7e-13	49.0	0.0	6.5e-13	48.1	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.24	gi|118576387|ref|YP_876130.1|	-	2.1e-06	27.2	0.3	7.3e-06	25.5	0.2	2.0	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|118576387|ref|YP_876130.1|	-	1.2e-05	24.8	0.3	3.8e-05	23.2	0.2	2.0	1	0	0	1	1	1	1	KH	domain
IstB_IS21	PF01695.12	gi|118576387|ref|YP_876130.1|	-	0.0001	21.7	0.0	0.00018	20.9	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_17	PF13207.1	gi|118576387|ref|YP_876130.1|	-	0.00017	22.4	0.0	0.00065	20.5	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|118576387|ref|YP_876130.1|	-	0.0002	21.2	0.0	0.00047	20.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
PIN	PF01850.16	gi|118576387|ref|YP_876130.1|	-	0.00027	21.2	0.3	0.00084	19.6	0.0	2.0	2	0	0	2	2	1	1	PIN	domain
AAA_18	PF13238.1	gi|118576387|ref|YP_876130.1|	-	0.0007	19.9	0.0	0.0032	17.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
PIN_4	PF13638.1	gi|118576387|ref|YP_876130.1|	-	0.0013	18.7	0.0	0.0042	17.1	0.0	1.9	1	1	0	1	1	1	1	PIN	domain
AAA_19	PF13245.1	gi|118576387|ref|YP_876130.1|	-	0.0019	17.9	0.0	0.0051	16.5	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_29	PF13555.1	gi|118576387|ref|YP_876130.1|	-	0.0027	17.1	0.0	0.0061	16.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|118576387|ref|YP_876130.1|	-	0.003	17.4	0.3	0.058	13.2	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|118576387|ref|YP_876130.1|	-	0.0036	17.4	0.0	0.029	14.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|118576387|ref|YP_876130.1|	-	0.0038	17.2	0.1	0.014	15.3	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
ArgK	PF03308.11	gi|118576387|ref|YP_876130.1|	-	0.0066	15.2	0.0	0.014	14.1	0.0	1.5	1	0	0	1	1	1	1	ArgK	protein
KH_5	PF13184.1	gi|118576387|ref|YP_876130.1|	-	0.01	15.6	0.3	0.039	13.7	0.2	2.0	1	0	0	1	1	1	0	NusA-like	KH	domain
AAA_25	PF13481.1	gi|118576387|ref|YP_876130.1|	-	0.012	15.0	0.0	0.044	13.1	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
KH_2	PF07650.12	gi|118576387|ref|YP_876130.1|	-	0.015	14.8	0.2	0.044	13.3	0.2	1.8	1	0	0	1	1	1	0	KH	domain
ATP_bind_1	PF03029.12	gi|118576387|ref|YP_876130.1|	-	0.025	14.1	0.1	0.12	11.9	0.1	2.0	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
ABC_tran	PF00005.22	gi|118576387|ref|YP_876130.1|	-	0.031	14.5	0.0	0.07	13.4	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_28	PF13521.1	gi|118576387|ref|YP_876130.1|	-	0.037	14.0	0.0	0.12	12.3	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|118576387|ref|YP_876130.1|	-	0.064	13.4	0.0	0.17	12.1	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|118576387|ref|YP_876130.1|	-	0.07	12.2	0.0	0.13	11.3	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_5	PF07728.9	gi|118576387|ref|YP_876130.1|	-	0.071	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Thymidylate_kin	PF02223.12	gi|118576387|ref|YP_876130.1|	-	0.078	12.3	0.1	0.91	8.8	0.0	2.6	2	1	1	3	3	3	0	Thymidylate	kinase
AAA_10	PF12846.2	gi|118576387|ref|YP_876130.1|	-	0.08	12.3	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
Sigma54_activ_2	PF14532.1	gi|118576387|ref|YP_876130.1|	-	0.087	12.8	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_30	PF13604.1	gi|118576387|ref|YP_876130.1|	-	0.089	12.3	0.3	0.38	10.2	0.0	2.2	3	0	0	3	3	2	0	AAA	domain
NB-ARC	PF00931.17	gi|118576387|ref|YP_876130.1|	-	0.09	11.6	0.0	0.15	10.8	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
ADK	PF00406.17	gi|118576387|ref|YP_876130.1|	-	0.12	12.2	0.8	22	4.9	0.1	2.7	3	0	0	3	3	2	0	Adenylate	kinase
Semialdhyde_dh	PF01118.19	gi|118576388|ref|YP_876131.1|	-	1.1e-33	116.1	0.0	1.8e-33	115.4	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|118576388|ref|YP_876131.1|	-	1.1e-16	61.2	0.0	1.5e-16	60.7	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
GFO_IDH_MocA	PF01408.17	gi|118576388|ref|YP_876131.1|	-	0.00021	21.7	0.0	0.0004	20.8	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DapB_N	PF01113.15	gi|118576388|ref|YP_876131.1|	-	0.00027	20.8	0.0	0.00044	20.1	0.0	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Saccharop_dh	PF03435.13	gi|118576388|ref|YP_876131.1|	-	0.0055	15.7	0.0	0.009	15.0	0.0	1.3	1	1	0	1	1	1	1	Saccharopine	dehydrogenase
AA_kinase	PF00696.23	gi|118576389|ref|YP_876132.1|	-	1.4e-36	126.2	2.1	1.6e-36	126.1	1.4	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Aminotran_3	PF00202.16	gi|118576390|ref|YP_876133.1|	-	7.6e-104	347.1	0.0	9.1e-104	346.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
AsnC_trans_reg	PF01037.16	gi|118576391|ref|YP_876134.1|	-	1.8e-12	46.7	0.2	2.3e-12	46.4	0.1	1.2	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|118576391|ref|YP_876134.1|	-	0.00049	19.7	0.2	0.13	11.9	0.0	2.1	1	1	1	2	2	2	2	GYD	domain
ACT_4	PF13291.1	gi|118576391|ref|YP_876134.1|	-	0.001	19.3	0.1	0.31	11.3	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
HTH_24	PF13412.1	gi|118576391|ref|YP_876134.1|	-	0.0013	18.0	0.2	0.017	14.5	0.1	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|118576391|ref|YP_876134.1|	-	0.0059	16.1	1.0	0.057	12.9	0.1	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
NapD	PF03927.8	gi|118576391|ref|YP_876134.1|	-	0.023	14.5	0.4	0.16	11.7	0.2	1.9	1	1	1	2	2	2	0	NapD	protein
Stk19	PF10494.4	gi|118576391|ref|YP_876134.1|	-	0.028	13.8	0.0	0.029	13.7	0.0	1.1	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
HMGL-like	PF00682.14	gi|118576392|ref|YP_876135.1|	-	8.5e-63	212.1	0.4	1.3e-62	211.5	0.3	1.2	1	0	0	1	1	1	1	HMGL-like
Radical_SAM	PF04055.16	gi|118576392|ref|YP_876135.1|	-	0.074	13.2	0.0	0.2	11.7	0.0	1.7	2	0	0	2	2	2	0	Radical	SAM	superfamily
ParBc	PF02195.13	gi|118576393|ref|YP_876136.1|	-	1.4e-18	66.7	0.8	6.5e-17	61.4	0.0	2.5	2	1	0	3	3	3	1	ParB-like	nuclease	domain
HTH_Tnp_1	PF01527.15	gi|118576393|ref|YP_876136.1|	-	0.013	15.4	0.0	0.039	13.9	0.0	1.7	2	0	0	2	2	2	0	Transposase
Auto_anti-p27	PF06677.7	gi|118576394|ref|YP_876137.1|	-	2.3e-06	27.2	2.1	3.4e-06	26.6	1.4	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
SUI1	PF01253.17	gi|118576397|ref|YP_876140.1|	-	2.2e-20	72.2	0.1	2.7e-20	71.9	0.1	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
PG_binding_2	PF08823.6	gi|118576397|ref|YP_876140.1|	-	0.11	12.6	0.3	0.39	10.8	0.0	1.9	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
Abi	PF02517.11	gi|118576398|ref|YP_876141.1|	-	3.3e-13	49.5	2.3	3.3e-13	49.5	1.6	2.7	2	1	0	2	2	2	1	CAAX	protease	self-immunity
Selenoprotein_S	PF06936.6	gi|118576398|ref|YP_876141.1|	-	0.16	11.4	0.0	0.25	10.8	0.0	1.2	1	0	0	1	1	1	0	Selenoprotein	S	(SelS)
Peptidase_M10	PF00413.19	gi|118576399|ref|YP_876142.1|	-	2.6e-07	30.4	0.2	2.5e-06	27.2	0.1	2.1	1	1	0	1	1	1	1	Matrixin
Peptidase_M43	PF05572.8	gi|118576399|ref|YP_876142.1|	-	1.5e-06	27.8	0.2	2.4e-06	27.2	0.1	1.2	1	0	0	1	1	1	1	Pregnancy-associated	plasma	protein-A
Reprolysin_5	PF13688.1	gi|118576399|ref|YP_876142.1|	-	0.00028	20.8	0.0	0.00041	20.3	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12
Peptidase_M66	PF10462.4	gi|118576399|ref|YP_876142.1|	-	0.00057	18.8	2.0	0.00081	18.3	1.4	1.1	1	0	0	1	1	1	1	Peptidase	M66
Reprolysin_4	PF13583.1	gi|118576399|ref|YP_876142.1|	-	0.0024	17.4	0.2	0.0033	16.9	0.1	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_2	PF13574.1	gi|118576399|ref|YP_876142.1|	-	0.015	15.3	0.1	0.022	14.8	0.1	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
TfuA	PF07812.7	gi|118576399|ref|YP_876142.1|	-	0.03	13.7	0.0	0.058	12.8	0.0	1.4	1	0	0	1	1	1	0	TfuA-like	protein
Reprolysin_3	PF13582.1	gi|118576399|ref|YP_876142.1|	-	0.035	14.6	0.3	0.062	13.8	0.2	1.4	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Peptidase_M54	PF07998.6	gi|118576399|ref|YP_876142.1|	-	0.078	12.7	0.1	0.17	11.6	0.1	1.5	1	0	0	1	1	1	0	Peptidase	family	M54
CofC	PF01983.11	gi|118576401|ref|YP_876144.1|	-	2.9e-15	55.8	0.0	3.7e-15	55.4	0.0	1.0	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transf_3	PF12804.2	gi|118576401|ref|YP_876144.1|	-	2.5e-10	40.6	0.1	3e-10	40.4	0.1	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
DUF188	PF02639.9	gi|118576401|ref|YP_876144.1|	-	0.28	10.6	1.1	0.5	9.8	0.3	1.7	1	1	1	2	2	2	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
UPF0052	PF01933.13	gi|118576402|ref|YP_876145.1|	-	1.3e-45	156.0	0.0	1.7e-45	155.6	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
DUF367	PF04034.8	gi|118576405|ref|YP_876148.1|	-	7e-35	119.4	0.0	8.9e-35	119.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|118576405|ref|YP_876148.1|	-	3.2e-11	42.6	0.3	5.1e-11	41.9	0.2	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
TPR_4	PF07721.9	gi|118576405|ref|YP_876148.1|	-	1	9.9	6.0	0.28	11.7	0.7	2.5	2	1	1	3	3	3	0	Tetratricopeptide	repeat
A2M_N	PF01835.14	gi|118576406|ref|YP_876149.1|	-	3e-20	72.3	2.0	0.00047	20.3	0.0	7.8	8	1	1	9	9	9	4	MG2	domain
LTD	PF00932.14	gi|118576406|ref|YP_876149.1|	-	6.2e-13	48.8	0.1	4.3e-12	46.1	0.1	2.5	2	0	0	2	2	2	1	Lamin	Tail	Domain
Arrestin_C	PF02752.17	gi|118576406|ref|YP_876149.1|	-	0.0016	18.5	0.3	38	4.3	0.0	4.9	5	0	0	5	5	5	0	Arrestin	(or	S-antigen),	C-terminal	domain
CarboxypepD_reg	PF13620.1	gi|118576406|ref|YP_876149.1|	-	0.033	14.2	6.3	0.52	10.3	0.0	5.4	6	0	0	6	6	6	0	Carboxypeptidase	regulatory-like	domain
zf-C3HC4_3	PF13920.1	gi|118576407|ref|YP_876150.1|	-	0.051	13.2	0.5	0.06	13.0	0.3	1.1	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1272	PF06906.6	gi|118576407|ref|YP_876150.1|	-	0.056	13.2	0.8	0.074	12.9	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
TF_Zn_Ribbon	PF08271.7	gi|118576407|ref|YP_876150.1|	-	1.1	8.6	6.0	0.35	10.2	0.4	2.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
PhnA_Zn_Ribbon	PF08274.7	gi|118576407|ref|YP_876150.1|	-	1.6	8.5	6.4	0.97	9.2	0.4	2.1	1	1	1	2	2	2	0	PhnA	Zinc-Ribbon
zf-dskA_traR	PF01258.12	gi|118576407|ref|YP_876150.1|	-	2.1	8.1	7.3	12	5.6	5.0	1.9	1	1	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zinc_ribbon_2	PF13240.1	gi|118576407|ref|YP_876150.1|	-	4.4	6.9	6.3	47	3.6	4.3	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
BPD_transp_2	PF02653.11	gi|118576408|ref|YP_876151.1|	-	8.6e-48	162.6	30.2	1e-47	162.3	20.9	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.11	gi|118576409|ref|YP_876152.1|	-	1.4e-32	112.7	41.1	1.7e-32	112.4	28.5	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
YbgT_YccB	PF08173.6	gi|118576409|ref|YP_876152.1|	-	0.017	14.8	5.9	0.017	14.8	4.1	4.1	4	0	0	4	4	4	0	Membrane	bound	YbgT-like	protein
ABC_tran	PF00005.22	gi|118576410|ref|YP_876153.1|	-	5.2e-25	88.3	0.0	6.9e-25	87.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576410|ref|YP_876153.1|	-	1.9e-11	44.4	0.0	0.00017	21.6	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|118576410|ref|YP_876153.1|	-	2.4e-10	40.0	0.9	0.00047	19.4	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|118576410|ref|YP_876153.1|	-	4e-06	27.3	0.1	7.4e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|118576410|ref|YP_876153.1|	-	3.5e-05	23.0	0.0	0.0067	15.5	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|118576410|ref|YP_876153.1|	-	4.1e-05	23.1	0.6	0.0048	16.3	0.3	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_22	PF13401.1	gi|118576410|ref|YP_876153.1|	-	5e-05	23.4	0.0	0.00015	21.9	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|118576410|ref|YP_876153.1|	-	0.00014	21.3	0.2	0.00038	19.9	0.2	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|118576410|ref|YP_876153.1|	-	0.00016	21.1	0.1	0.0023	17.3	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
ABC_ATPase	PF09818.4	gi|118576410|ref|YP_876153.1|	-	0.00062	18.4	0.6	0.071	11.6	0.1	2.3	2	1	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_16	PF13191.1	gi|118576410|ref|YP_876153.1|	-	0.0013	18.7	0.2	0.0038	17.2	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|118576410|ref|YP_876153.1|	-	0.0056	15.8	0.3	0.011	14.9	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
FtsK_SpoIIIE	PF01580.13	gi|118576410|ref|YP_876153.1|	-	0.0086	15.5	1.3	0.013	15.0	0.1	1.8	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|118576410|ref|YP_876153.1|	-	0.012	15.5	0.1	0.021	14.6	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|118576410|ref|YP_876153.1|	-	0.014	15.2	0.2	0.13	12.1	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_19	PF13245.1	gi|118576410|ref|YP_876153.1|	-	0.019	14.7	0.3	0.051	13.3	0.1	1.8	2	0	0	2	2	1	0	Part	of	AAA	domain
AAA_30	PF13604.1	gi|118576410|ref|YP_876153.1|	-	0.023	14.2	0.2	0.066	12.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|118576410|ref|YP_876153.1|	-	0.029	14.5	0.0	0.19	11.9	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.9	gi|118576410|ref|YP_876153.1|	-	0.03	14.0	0.5	0.055	13.1	0.3	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Viral_helicase1	PF01443.13	gi|118576410|ref|YP_876153.1|	-	0.034	13.6	0.0	0.086	12.3	0.0	1.7	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.7	gi|118576410|ref|YP_876153.1|	-	0.037	13.6	0.1	0.092	12.3	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
Dynamin_N	PF00350.18	gi|118576410|ref|YP_876153.1|	-	0.037	13.8	0.3	0.048	13.4	0.2	1.4	1	1	0	1	1	1	0	Dynamin	family
AAA_14	PF13173.1	gi|118576410|ref|YP_876153.1|	-	0.075	12.9	0.0	0.33	10.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|118576410|ref|YP_876153.1|	-	0.075	12.4	0.2	0.13	11.6	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
TrwB_AAD_bind	PF10412.4	gi|118576410|ref|YP_876153.1|	-	0.079	11.5	0.1	0.12	10.9	0.1	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Arch_ATPase	PF01637.13	gi|118576410|ref|YP_876153.1|	-	0.11	12.2	0.0	0.29	10.7	0.0	1.6	2	0	0	2	2	2	0	Archaeal	ATPase
Miro	PF08477.8	gi|118576410|ref|YP_876153.1|	-	0.13	12.7	0.2	0.29	11.6	0.1	1.6	2	0	0	2	2	1	0	Miro-like	protein
AAA_13	PF13166.1	gi|118576410|ref|YP_876153.1|	-	0.19	10.1	0.0	0.24	9.8	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|118576411|ref|YP_876154.1|	-	2.4e-28	99.1	0.0	3.1e-28	98.8	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576411|ref|YP_876154.1|	-	1.4e-13	51.5	0.1	5.3e-07	29.8	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|118576411|ref|YP_876154.1|	-	2e-07	30.4	0.1	4.1e-07	29.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|118576411|ref|YP_876154.1|	-	8.9e-07	29.4	0.0	1.1e-06	29.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|118576411|ref|YP_876154.1|	-	5.2e-05	22.5	0.2	0.00092	18.4	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
BCA_ABC_TP_C	PF12399.3	gi|118576411|ref|YP_876154.1|	-	0.00042	19.9	0.1	0.00074	19.1	0.0	1.4	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_15	PF13175.1	gi|118576411|ref|YP_876154.1|	-	0.00087	18.4	0.0	0.0012	18.0	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|118576411|ref|YP_876154.1|	-	0.002	17.8	0.0	0.0048	16.6	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_13	PF13166.1	gi|118576411|ref|YP_876154.1|	-	0.0028	16.1	0.0	0.0037	15.8	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|118576411|ref|YP_876154.1|	-	0.01	15.0	0.0	0.016	14.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
FtsK_SpoIIIE	PF01580.13	gi|118576411|ref|YP_876154.1|	-	0.074	12.5	0.0	0.13	11.6	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_17	PF13207.1	gi|118576411|ref|YP_876154.1|	-	0.1	13.4	0.0	0.22	12.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|118576411|ref|YP_876154.1|	-	0.1	12.5	0.1	0.3	11.0	0.1	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_30	PF13604.1	gi|118576411|ref|YP_876154.1|	-	0.11	12.0	0.1	0.6	9.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|118576411|ref|YP_876154.1|	-	0.13	11.6	0.0	0.2	11.0	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
T2SE	PF00437.15	gi|118576411|ref|YP_876154.1|	-	0.13	11.1	0.1	0.36	9.6	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Mg_chelatase	PF01078.16	gi|118576411|ref|YP_876154.1|	-	0.13	11.3	0.0	0.19	10.8	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
G-alpha	PF00503.15	gi|118576411|ref|YP_876154.1|	-	0.16	10.6	0.0	0.22	10.1	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
ANF_receptor	PF01094.23	gi|118576412|ref|YP_876155.1|	-	2e-29	102.4	0.1	2.7e-29	102.0	0.0	1.1	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_6	PF13458.1	gi|118576412|ref|YP_876155.1|	-	7.3e-26	91.3	0.1	1.3e-25	90.4	0.0	1.4	1	1	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|118576412|ref|YP_876155.1|	-	5.5e-06	25.3	0.0	1.9e-05	23.6	0.0	1.7	2	0	0	2	2	2	1	Periplasmic	binding	protein	domain
Serpin	PF00079.15	gi|118576413|ref|YP_876156.1|	-	2.9e-90	303.1	0.0	3.3e-90	302.8	0.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
TSP_3	PF02412.13	gi|118576414|ref|YP_876157.1|	-	2.2e-06	27.0	16.2	0.00033	20.0	0.3	3.4	2	2	1	3	3	3	2	Thrombospondin	type	3	repeat
Peptidase_S32	PF05579.8	gi|118576414|ref|YP_876157.1|	-	0.021	13.7	0.2	0.038	12.9	0.1	1.3	1	0	0	1	1	1	0	Equine	arteritis	virus	serine	endopeptidase	S32
PSCyt2	PF07583.6	gi|118576414|ref|YP_876157.1|	-	0.37	10.2	2.0	3.1	7.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1549)
Peptidase_M24	PF00557.19	gi|118576415|ref|YP_876158.1|	-	2e-36	125.5	0.1	2.3e-36	125.3	0.1	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Tn7_Tnp_TnsA_C	PF08721.6	gi|118576415|ref|YP_876158.1|	-	0.047	13.6	0.0	0.87	9.6	0.0	2.3	2	0	0	2	2	2	0	TnsA	endonuclease	C	terminal
DUF1512	PF07431.7	gi|118576417|ref|YP_876160.1|	-	2.2e-92	309.5	1.0	2.7e-92	309.2	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
TBP	PF00352.16	gi|118576418|ref|YP_876161.1|	-	2.6e-61	202.9	0.0	1.8e-30	104.1	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|118576418|ref|YP_876161.1|	-	7.2e-07	29.1	0.0	0.00055	19.9	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
Polyketide_cyc2	PF10604.4	gi|118576419|ref|YP_876162.1|	-	6.8e-08	32.7	0.0	8e-08	32.5	0.0	1.1	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc	PF03364.15	gi|118576419|ref|YP_876162.1|	-	5.7e-07	29.5	0.0	1.1e-06	28.6	0.0	1.5	1	1	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
AHSA1	PF08327.6	gi|118576419|ref|YP_876162.1|	-	0.048	13.7	0.0	0.067	13.2	0.0	1.3	1	1	0	1	1	1	0	Activator	of	Hsp90	ATPase	homolog	1-like	protein
Glycos_transf_2	PF00535.21	gi|118576420|ref|YP_876163.1|	-	9e-30	103.5	0.0	1.2e-29	103.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|118576420|ref|YP_876163.1|	-	1.8e-24	86.8	0.0	2.7e-24	86.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|118576420|ref|YP_876163.1|	-	6.2e-13	48.3	0.0	9.7e-13	47.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|118576420|ref|YP_876163.1|	-	0.00019	21.6	0.0	0.00033	20.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
DUF2067	PF09840.4	gi|118576421|ref|YP_876164.1|	-	0.001	18.6	0.2	0.002	17.6	0.2	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
SLEI_Leptospira	PF07620.6	gi|118576421|ref|YP_876164.1|	-	0.1	12.4	0.9	0.44	10.4	0.2	2.3	2	0	0	2	2	2	0	SLEI
Trypsin_2	PF13365.1	gi|118576422|ref|YP_876165.1|	-	1.2e-20	73.7	0.5	2.2e-20	72.8	0.3	1.5	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
Trypsin	PF00089.21	gi|118576422|ref|YP_876165.1|	-	8.4e-13	48.4	0.1	2e-12	47.1	0.0	1.6	1	1	0	1	1	1	1	Trypsin
PDZ_2	PF13180.1	gi|118576422|ref|YP_876165.1|	-	1.6e-12	47.0	0.3	1.6e-12	47.0	0.2	2.4	3	0	0	3	3	3	1	PDZ	domain
Peptidase_S29	PF02907.10	gi|118576422|ref|YP_876165.1|	-	0.0054	16.2	0.2	0.015	14.8	0.0	1.9	2	0	0	2	2	2	1	Hepatitis	C	virus	NS3	protease
Peptidase_S46	PF10459.4	gi|118576422|ref|YP_876165.1|	-	0.025	13.0	1.7	0.027	12.9	0.2	1.6	2	0	0	2	2	2	0	Peptidase	S46
Peptidase_S32	PF05579.8	gi|118576422|ref|YP_876165.1|	-	0.091	11.7	1.1	5.7	5.8	0.1	2.2	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
PDZ	PF00595.19	gi|118576422|ref|YP_876165.1|	-	0.14	12.3	3.7	11	6.2	0.0	3.3	3	0	0	3	3	3	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|118576422|ref|YP_876165.1|	-	0.15	11.9	0.8	0.75	9.6	0.1	2.4	2	1	0	2	2	2	0	Tricorn	protease	PDZ	domain
Peptidase_S7	PF00949.16	gi|118576422|ref|YP_876165.1|	-	0.15	11.4	0.1	0.31	10.4	0.1	1.4	1	0	0	1	1	1	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
Radical_SAM	PF04055.16	gi|118576423|ref|YP_876166.1|	-	3.1e-07	30.7	0.0	4.4e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Radical_SAM	PF04055.16	gi|118576424|ref|YP_876167.1|	-	1.6e-18	67.4	0.1	2.2e-18	67.0	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Abhydrolase_3	PF07859.8	gi|118576425|ref|YP_876168.1|	-	2.3e-05	24.0	0.1	3.4e-05	23.5	0.1	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|118576425|ref|YP_876168.1|	-	0.007	16.1	0.1	0.0098	15.6	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Ribosomal_60s	PF00428.14	gi|118576426|ref|YP_876169.1|	-	8.7e-12	45.2	18.8	1.1e-11	45.0	13.0	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|118576426|ref|YP_876169.1|	-	0.82	9.6	11.7	1.4	8.8	4.2	2.2	1	1	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
AsnC_trans_reg	PF01037.16	gi|118576430|ref|YP_876173.1|	-	0.074	12.7	0.0	0.1	12.3	0.0	1.3	1	0	0	1	1	1	0	AsnC	family
Ly-6_related	PF06579.7	gi|118576430|ref|YP_876173.1|	-	0.14	12.4	0.1	0.15	12.2	0.0	1.2	1	0	0	1	1	1	0	Caenorhabditis	elegans	ly-6-related	protein
Arabinose_trans	PF04602.7	gi|118576431|ref|YP_876174.1|	-	0.068	11.3	1.0	0.066	11.3	0.7	1.0	1	0	0	1	1	1	0	Mycobacterial	cell	wall	arabinan	synthesis	protein
DUF4448	PF14610.1	gi|118576431|ref|YP_876174.1|	-	0.15	11.5	0.5	0.15	11.5	0.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4448)
Peptidase_S32	PF05579.8	gi|118576433|ref|YP_876176.1|	-	0.16	10.9	0.2	0.18	10.7	0.2	1.1	1	0	0	1	1	1	0	Equine	arteritis	virus	serine	endopeptidase	S32
Ribosomal_L10	PF00466.15	gi|118576434|ref|YP_876177.1|	-	4.9e-15	55.2	0.2	8.3e-15	54.5	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_L1	PF00687.16	gi|118576435|ref|YP_876178.1|	-	4e-43	147.3	0.1	4.8e-43	147.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Robl_LC7	PF03259.12	gi|118576435|ref|YP_876178.1|	-	0.087	12.3	0.1	1.1	8.8	0.0	2.2	2	0	0	2	2	2	0	Roadblock/LC7	domain
tRNA-synt_2c	PF01411.14	gi|118576438|ref|YP_876181.1|	-	1.3e-70	238.2	0.0	1.2e-56	192.1	0.0	2.3	2	1	0	2	2	2	2	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|118576438|ref|YP_876181.1|	-	6.8e-13	48.2	1.8	2.5e-12	46.4	1.2	2.1	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|118576438|ref|YP_876181.1|	-	7.1e-06	25.6	3.3	2e-05	24.1	2.3	1.8	1	0	0	1	1	1	1	DHHA1	domain
tRNA-synt_1	PF00133.17	gi|118576439|ref|YP_876182.1|	-	4.3e-38	130.7	0.0	5.6e-38	130.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|118576439|ref|YP_876182.1|	-	1.2e-12	47.2	0.0	4.6e-12	45.3	0.2	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|118576439|ref|YP_876182.1|	-	4.6e-06	26.0	0.0	1.3e-05	24.6	0.0	1.6	1	1	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|118576439|ref|YP_876182.1|	-	0.0082	15.2	0.0	0.014	14.5	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1	PF00133.17	gi|118576440|ref|YP_876183.1|	-	6.1e-19	67.4	0.0	2.2e-10	39.2	0.0	2.0	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|118576440|ref|YP_876183.1|	-	2.6e-17	63.0	0.0	4.3e-17	62.2	0.0	1.3	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|118576440|ref|YP_876183.1|	-	2e-09	36.6	0.0	3.1e-09	35.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|118576440|ref|YP_876183.1|	-	6.2e-07	28.8	0.0	1e-06	28.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
fn3	PF00041.16	gi|118576441|ref|YP_876184.1|	-	5.6e-25	87.2	0.2	7.8e-17	61.1	0.0	2.2	2	0	0	2	2	2	2	Fibronectin	type	III	domain
PepSY_2	PF13670.1	gi|118576441|ref|YP_876184.1|	-	0.6	10.0	3.2	4.5	7.2	0.1	2.6	3	0	0	3	3	3	0	Peptidase	propeptide	and	YPEB	domain
fn3	PF00041.16	gi|118576442|ref|YP_876185.1|	-	1.9e-51	172.1	16.7	3.1e-15	56.0	2.1	4.2	4	0	0	4	4	4	4	Fibronectin	type	III	domain
SusE	PF14292.1	gi|118576442|ref|YP_876185.1|	-	8.1e-09	35.3	8.7	0.0059	16.4	0.1	5.1	3	2	2	5	5	5	4	SusE	outer	membrane	protein
CBM_6	PF03422.10	gi|118576442|ref|YP_876185.1|	-	2.5	8.2	12.7	5.1	7.2	1.0	3.4	3	1	1	4	4	4	0	Carbohydrate	binding	module	(family	6)
CbiQ	PF02361.11	gi|118576443|ref|YP_876186.1|	-	0.092	12.3	3.4	0.11	12.0	2.4	1.1	1	0	0	1	1	1	0	Cobalt	transport	protein
Glyoxalase_2	PF12681.2	gi|118576445|ref|YP_876188.1|	-	4e-14	53.1	0.0	4.7e-14	52.9	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|118576445|ref|YP_876188.1|	-	6.7e-12	45.4	0.0	8.5e-12	45.1	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_4	PF13669.1	gi|118576445|ref|YP_876188.1|	-	4.7e-08	33.0	0.0	3.8e-07	30.0	0.0	2.0	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|118576445|ref|YP_876188.1|	-	0.0075	16.1	0.0	0.34	10.8	0.0	2.0	2	0	0	2	2	2	1	Glyoxalase-like	domain
BPD_transp_1	PF00528.17	gi|118576446|ref|YP_876189.1|	-	1.4e-22	80.1	14.5	1.4e-22	80.1	10.1	1.9	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
PrgI	PF12666.2	gi|118576446|ref|YP_876189.1|	-	2.9	8.0	13.3	0.11	12.6	0.5	2.6	2	1	1	3	3	3	0	PrgI	family	protein
ABC_tran	PF00005.22	gi|118576447|ref|YP_876190.1|	-	3.3e-29	101.9	0.0	4.8e-29	101.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576447|ref|YP_876190.1|	-	4.2e-07	30.2	0.0	0.0056	16.6	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|118576447|ref|YP_876190.1|	-	9.2e-05	21.7	0.2	0.18	11.0	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|118576447|ref|YP_876190.1|	-	0.00016	21.1	0.0	0.00032	20.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|118576447|ref|YP_876190.1|	-	0.0002	21.5	0.0	0.38	10.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|118576447|ref|YP_876190.1|	-	0.00062	19.2	0.5	0.0011	18.5	0.1	1.5	2	0	0	2	2	2	1	AAA-like	domain
AAA_16	PF13191.1	gi|118576447|ref|YP_876190.1|	-	0.0017	18.4	0.5	0.0031	17.5	0.4	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|118576447|ref|YP_876190.1|	-	0.0054	15.9	0.0	0.0078	15.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|118576447|ref|YP_876190.1|	-	0.012	15.0	0.0	0.24	10.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|118576447|ref|YP_876190.1|	-	0.026	13.6	0.0	0.044	12.8	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_17	PF13207.1	gi|118576447|ref|YP_876190.1|	-	0.03	15.1	0.0	0.1	13.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|118576447|ref|YP_876190.1|	-	0.049	13.1	0.3	0.57	9.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|118576447|ref|YP_876190.1|	-	0.069	12.2	0.0	0.15	11.2	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF87	PF01935.12	gi|118576447|ref|YP_876190.1|	-	0.087	12.6	0.1	0.2	11.4	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_23	PF13476.1	gi|118576447|ref|YP_876190.1|	-	0.12	12.7	0.0	0.18	12.1	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|118576447|ref|YP_876190.1|	-	0.13	10.8	0.4	0.47	8.9	0.0	1.9	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
Miro	PF08477.8	gi|118576447|ref|YP_876190.1|	-	0.15	12.5	0.0	0.28	11.6	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
Phosphonate-bd	PF12974.2	gi|118576448|ref|YP_876191.1|	-	1.7e-40	138.9	0.2	2.3e-40	138.5	0.1	1.1	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
Transferrin	PF00405.12	gi|118576448|ref|YP_876191.1|	-	6.5e-06	25.2	0.0	1.3e-05	24.2	0.0	1.5	2	0	0	2	2	2	1	Transferrin
NMT1_2	PF13379.1	gi|118576448|ref|YP_876191.1|	-	0.00011	21.6	0.1	0.001	18.5	0.0	2.4	2	1	1	3	3	3	1	NMT1-like	family
NMT1	PF09084.6	gi|118576448|ref|YP_876191.1|	-	0.00013	21.6	0.0	0.00035	20.2	0.0	1.6	2	0	0	2	2	2	1	NMT1/THI5	like
SBP_bac_3	PF00497.15	gi|118576448|ref|YP_876191.1|	-	0.0012	18.1	0.0	0.0055	15.9	0.0	1.9	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
YhfZ_C	PF14503.1	gi|118576448|ref|YP_876191.1|	-	0.0079	15.5	0.0	1.1	8.5	0.0	2.3	2	0	0	2	2	2	2	YhfZ	C-terminal	domain
SHOCT	PF09851.4	gi|118576448|ref|YP_876191.1|	-	0.03	13.8	0.1	1.7	8.2	0.0	2.7	2	0	0	2	2	2	0	Short	C-terminal	domain
LysR_substrate	PF03466.15	gi|118576448|ref|YP_876191.1|	-	0.061	12.4	0.1	0.88	8.6	0.0	2.3	2	0	0	2	2	2	0	LysR	substrate	binding	domain
Dioxygenase_N	PF04444.9	gi|118576448|ref|YP_876191.1|	-	0.099	12.6	0.0	5.4	7.0	0.0	2.3	2	0	0	2	2	2	0	Catechol	dioxygenase	N	terminus
PSD3	PF07626.6	gi|118576448|ref|YP_876191.1|	-	0.14	12.1	0.1	0.45	10.5	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1587)
HTH_7	PF02796.10	gi|118576449|ref|YP_876192.1|	-	0.00029	20.6	0.1	0.015	15.1	0.0	2.9	3	0	0	3	3	3	1	Helix-turn-helix	domain	of	resolvase
HTH_20	PF12840.2	gi|118576449|ref|YP_876192.1|	-	0.00067	19.4	0.0	0.00096	18.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|118576449|ref|YP_876192.1|	-	0.0018	18.1	0.1	0.0031	17.4	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.1	gi|118576449|ref|YP_876192.1|	-	0.0061	16.1	0.0	0.014	15.0	0.0	1.7	1	1	0	1	1	1	1	Homeodomain-like	domain
TrmB	PF01978.14	gi|118576449|ref|YP_876192.1|	-	0.0077	15.9	0.1	0.013	15.1	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1492	PF07374.6	gi|118576449|ref|YP_876192.1|	-	0.0094	16.0	0.1	0.014	15.5	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1492)
HTH_11	PF08279.7	gi|118576449|ref|YP_876192.1|	-	0.012	15.2	0.3	0.02	14.4	0.0	1.6	2	0	0	2	2	2	0	HTH	domain
HTH_45	PF14947.1	gi|118576449|ref|YP_876192.1|	-	0.02	14.6	0.2	0.059	13.1	0.0	1.8	1	1	1	2	2	2	0	Winged	helix-turn-helix
FUR	PF01475.14	gi|118576449|ref|YP_876192.1|	-	0.022	14.6	0.0	0.026	14.4	0.0	1.3	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
N1221	PF07923.8	gi|118576449|ref|YP_876192.1|	-	0.036	12.9	0.2	0.04	12.7	0.1	1.0	1	0	0	1	1	1	0	N1221-like	protein
HTH_5	PF01022.15	gi|118576449|ref|YP_876192.1|	-	0.049	13.3	0.0	0.091	12.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|118576450|ref|YP_876193.1|	-	7.7e-06	25.6	0.0	1.1e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|118576450|ref|YP_876193.1|	-	2.1e-05	24.1	0.3	6.6e-05	22.5	0.2	2.0	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|118576450|ref|YP_876193.1|	-	0.00041	19.8	0.1	0.00049	19.5	0.1	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|118576450|ref|YP_876193.1|	-	0.012	15.2	0.0	0.034	13.8	0.0	1.7	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DUF742	PF05331.6	gi|118576450|ref|YP_876193.1|	-	0.025	14.1	0.0	0.031	13.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
HTH_26	PF13443.1	gi|118576450|ref|YP_876193.1|	-	0.037	14.2	0.1	1.1	9.5	0.0	2.2	1	1	1	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
PadR	PF03551.9	gi|118576450|ref|YP_876193.1|	-	0.061	13.1	0.1	0.12	12.1	0.0	1.5	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
CbtA	PF09490.5	gi|118576451|ref|YP_876194.1|	-	2.3e-17	63.0	13.1	6e-17	61.7	9.1	1.6	1	1	0	1	1	1	1	Probable	cobalt	transporter	subunit	(CbtA)
PTS_EIIC_2	PF13303.1	gi|118576451|ref|YP_876194.1|	-	0.0066	15.3	0.4	0.0066	15.3	0.3	1.8	3	0	0	3	3	3	1	Phosphotransferase	system,	EIIC
CbtB	PF09489.5	gi|118576452|ref|YP_876195.1|	-	9.9e-06	25.3	9.6	0.00016	21.5	6.6	2.1	1	1	0	1	1	1	1	Probable	cobalt	transporter	subunit	(CbtB)
SecE	PF00584.15	gi|118576452|ref|YP_876195.1|	-	0.018	14.6	1.1	0.024	14.1	0.7	1.2	1	0	0	1	1	1	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
DUF4443	PF14544.1	gi|118576453|ref|YP_876196.1|	-	0.00045	20.0	0.0	0.0023	17.7	0.0	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4443)
Thioredoxin_4	PF13462.1	gi|118576454|ref|YP_876197.1|	-	1.4e-23	83.7	0.0	1.6e-23	83.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.15	gi|118576454|ref|YP_876197.1|	-	1.3e-06	28.1	0.2	1.6e-05	24.5	0.1	2.0	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|118576455|ref|YP_876198.1|	-	0.059	13.3	0.0	0.061	13.3	0.0	1.0	1	0	0	1	1	1	0	Thioredoxin
Phos_pyr_kin	PF08543.7	gi|118576456|ref|YP_876199.1|	-	0.015	14.5	0.0	0.021	14.0	0.0	1.1	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
NAD_kinase	PF01513.16	gi|118576457|ref|YP_876200.1|	-	6.3e-29	100.6	0.1	8.5e-29	100.2	0.1	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
MarR	PF01047.17	gi|118576457|ref|YP_876200.1|	-	9e-05	22.1	1.0	0.00018	21.1	0.3	1.8	2	0	0	2	2	2	1	MarR	family
HTH_24	PF13412.1	gi|118576457|ref|YP_876200.1|	-	0.00067	18.9	0.7	0.0013	18.0	0.1	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|118576457|ref|YP_876200.1|	-	0.0028	17.9	1.0	0.0048	17.1	0.2	1.8	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|118576457|ref|YP_876200.1|	-	0.0049	16.5	0.4	0.012	15.2	0.3	1.7	1	0	0	1	1	1	1	MarR	family
FeoC	PF09012.5	gi|118576457|ref|YP_876200.1|	-	0.0092	15.6	0.2	0.029	14.0	0.0	1.9	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
TrmB	PF01978.14	gi|118576457|ref|YP_876200.1|	-	0.0096	15.6	0.1	0.02	14.5	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|118576457|ref|YP_876200.1|	-	0.074	12.5	0.3	0.18	11.3	0.1	1.6	1	1	1	2	2	2	0	TFIIE	alpha	subunit
Sigma70_r4_2	PF08281.7	gi|118576457|ref|YP_876200.1|	-	0.11	11.9	0.3	0.32	10.4	0.0	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|118576457|ref|YP_876200.1|	-	0.66	9.5	3.5	1.1	8.8	0.1	3.0	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
CTP_synth_N	PF06418.9	gi|118576458|ref|YP_876201.1|	-	2.1e-117	391.1	0.1	2.8e-117	390.7	0.1	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|118576458|ref|YP_876201.1|	-	7.6e-41	139.6	0.0	1.2e-40	139.0	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118576458|ref|YP_876201.1|	-	2.3e-07	30.4	0.0	1.5e-05	24.5	0.0	2.5	2	1	0	2	2	2	1	Peptidase	C26
CbiA	PF01656.18	gi|118576458|ref|YP_876201.1|	-	0.00028	20.3	0.0	0.00051	19.4	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Trp_syntA	PF00290.15	gi|118576459|ref|YP_876202.1|	-	3.8e-69	232.1	0.0	4.2e-69	231.9	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|118576459|ref|YP_876202.1|	-	0.00019	20.7	0.3	0.00036	19.8	0.2	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.16	gi|118576459|ref|YP_876202.1|	-	0.015	14.2	0.0	0.022	13.7	0.0	1.2	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
PcrB	PF01884.12	gi|118576459|ref|YP_876202.1|	-	0.019	14.1	2.3	0.018	14.2	0.7	1.8	2	1	0	2	2	2	0	PcrB	family
TPR_15	PF13429.1	gi|118576459|ref|YP_876202.1|	-	0.028	13.4	0.0	1.6	7.7	0.0	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
FMN_dh	PF01070.13	gi|118576459|ref|YP_876202.1|	-	0.051	12.4	2.1	0.11	11.3	1.4	1.5	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
NanE	PF04131.9	gi|118576459|ref|YP_876202.1|	-	0.065	12.2	0.2	0.1	11.5	0.1	1.3	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
ThiG	PF05690.9	gi|118576459|ref|YP_876202.1|	-	0.078	12.0	0.4	0.12	11.4	0.3	1.3	1	0	0	1	1	1	0	Thiazole	biosynthesis	protein	ThiG
GYD	PF08734.6	gi|118576459|ref|YP_876202.1|	-	0.16	11.7	0.7	0.35	10.6	0.2	1.8	2	0	0	2	2	2	0	GYD	domain
IMPDH	PF00478.20	gi|118576459|ref|YP_876202.1|	-	0.17	10.7	4.6	0.033	13.0	1.1	1.6	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
PALP	PF00291.20	gi|118576460|ref|YP_876203.1|	-	7.4e-47	160.0	3.1	9e-47	159.7	2.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
IGPS	PF00218.16	gi|118576461|ref|YP_876204.1|	-	4.4e-65	219.2	0.0	5.1e-65	219.0	0.0	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
FMN_dh	PF01070.13	gi|118576461|ref|YP_876204.1|	-	0.00036	19.5	2.6	0.0037	16.1	0.2	2.3	2	1	0	2	2	2	2	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|118576461|ref|YP_876204.1|	-	0.028	13.7	0.2	0.065	12.4	0.1	1.6	2	0	0	2	2	2	0	Histidine	biosynthesis	protein
Glycos_transf_3	PF00591.16	gi|118576462|ref|YP_876205.1|	-	1.9e-73	246.9	0.7	2.6e-73	246.5	0.5	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|118576462|ref|YP_876205.1|	-	1.2e-10	40.8	1.6	2.7e-10	39.6	1.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
GATase	PF00117.23	gi|118576463|ref|YP_876206.1|	-	5e-57	192.4	0.0	5.6e-57	192.3	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118576463|ref|YP_876206.1|	-	2.6e-12	46.6	0.4	6.4e-12	45.3	0.2	1.5	1	1	0	1	1	1	1	Peptidase	C26
Chorismate_bind	PF00425.13	gi|118576464|ref|YP_876207.1|	-	8.4e-90	300.5	0.0	1e-89	300.2	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|118576464|ref|YP_876207.1|	-	5.9e-16	58.7	0.1	7.3e-15	55.2	0.0	2.4	3	0	0	3	3	3	1	Anthranilate	synthase	component	I,	N	terminal	region
N6_N4_Mtase	PF01555.13	gi|118576466|ref|YP_876209.1|	-	3.9e-21	75.6	0.0	6e-21	74.9	0.0	1.5	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576466|ref|YP_876209.1|	-	2.8e-06	27.3	0.1	6.4e-05	22.9	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576466|ref|YP_876209.1|	-	0.0015	18.1	0.0	0.0024	17.4	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.1	gi|118576466|ref|YP_876209.1|	-	0.16	11.5	0.0	0.26	10.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
eIF2_C	PF09173.6	gi|118576467|ref|YP_876210.1|	-	0.13	12.3	0.0	0.16	12.0	0.0	1.2	1	0	0	1	1	1	0	Initiation	factor	eIF2	gamma,	C	terminal
ILVD_EDD	PF00920.16	gi|118576469|ref|YP_876212.1|	-	1.1e-214	713.7	1.8	1.2e-214	713.5	1.2	1.0	1	0	0	1	1	1	1	Dehydratase	family
FeoA	PF04023.9	gi|118576469|ref|YP_876212.1|	-	0.0087	16.0	0.0	3.8	7.5	0.0	3.2	3	0	0	3	3	3	2	FeoA	domain
HIT	PF01230.18	gi|118576473|ref|YP_876216.1|	-	1.6e-21	76.6	0.0	2.1e-21	76.2	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|118576473|ref|YP_876216.1|	-	3.1e-11	43.5	0.0	4e-11	43.1	0.0	1.1	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|118576473|ref|YP_876216.1|	-	0.037	13.6	1.1	0.038	13.6	0.0	1.5	2	1	0	2	2	2	0	Protein	similar	to	CwfJ	C-terminus	1
eRF1_2	PF03464.10	gi|118576474|ref|YP_876217.1|	-	2.8e-27	95.6	0.0	5.1e-27	94.8	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|118576474|ref|YP_876217.1|	-	6.3e-18	65.0	0.0	1.4e-17	64.0	0.0	1.6	1	0	0	1	1	1	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|118576474|ref|YP_876217.1|	-	1.2e-14	54.0	0.0	1.9e-14	53.3	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	1
zf-FPG_IleRS	PF06827.9	gi|118576474|ref|YP_876217.1|	-	0.0038	16.8	1.5	0.21	11.2	0.4	2.6	2	0	0	2	2	2	1	Zinc	finger	found	in	FPG	and	IleRS
HypA	PF01155.14	gi|118576474|ref|YP_876217.1|	-	0.12	12.1	0.0	0.21	11.2	0.0	1.5	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Radical_SAM	PF04055.16	gi|118576476|ref|YP_876219.1|	-	1.8e-11	44.5	0.3	3.4e-11	43.5	0.2	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|118576476|ref|YP_876219.1|	-	2.6e-08	33.8	0.0	5.5e-08	32.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|118576476|ref|YP_876219.1|	-	3.4e-07	30.4	0.2	7.6e-07	29.3	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DSPc	PF00782.15	gi|118576481|ref|YP_876224.1|	-	2e-14	53.3	0.0	2.4e-14	53.0	0.0	1.1	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.22	gi|118576481|ref|YP_876224.1|	-	5.9e-07	29.0	0.0	9.9e-07	28.3	0.0	1.4	1	1	0	1	1	1	1	Protein-tyrosine	phosphatase
PTPlike_phytase	PF14566.1	gi|118576481|ref|YP_876224.1|	-	7.3e-07	29.3	0.0	1.1e-06	28.7	0.0	1.3	1	0	0	1	1	1	1	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|118576481|ref|YP_876224.1|	-	0.001	19.3	0.0	0.0012	19.1	0.0	1.4	1	0	0	1	1	1	1	Tyrosine	phosphatase	family
CDKN3	PF05706.7	gi|118576481|ref|YP_876224.1|	-	0.034	13.6	0.1	0.046	13.1	0.1	1.2	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase2	PF03162.8	gi|118576481|ref|YP_876224.1|	-	0.043	13.1	0.0	0.23	10.8	0.0	1.8	1	1	0	1	1	1	0	Tyrosine	phosphatase	family
HTH_AsnC-type	PF13404.1	gi|118576485|ref|YP_876228.1|	-	1.9e-09	36.9	0.0	0.0001	21.7	0.0	2.7	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|118576485|ref|YP_876228.1|	-	0.00096	18.4	0.2	0.025	13.9	0.1	3.0	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|118576485|ref|YP_876228.1|	-	0.0071	16.0	0.0	3.3	7.4	0.0	3.0	2	1	0	2	2	2	2	AsnC	family
Aldo_ket_red	PF00248.16	gi|118576486|ref|YP_876229.1|	-	8.9e-50	169.0	0.0	1e-49	168.8	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
HTH_Tnp_Mu_1	PF02316.11	gi|118576486|ref|YP_876229.1|	-	0.057	13.1	0.0	0.18	11.5	0.0	1.8	2	0	0	2	2	2	0	Mu	DNA-binding	domain
Plasmid_stabil	PF05016.9	gi|118576487|ref|YP_876230.1|	-	0.067	13.5	0.3	3.8	7.9	0.0	2.9	2	0	0	2	2	2	0	Plasmid	stabilisation	system	protein
TMF_DNA_bd	PF12329.3	gi|118576487|ref|YP_876230.1|	-	0.069	12.9	2.4	8.9	6.2	0.2	3.6	3	0	0	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
CENP-F_leu_zip	PF10473.4	gi|118576487|ref|YP_876230.1|	-	0.12	12.2	4.9	0.29	11.0	0.0	3.3	3	1	0	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Tropomyosin	PF00261.15	gi|118576487|ref|YP_876230.1|	-	0.48	9.4	0.0	0.48	9.4	0.0	3.3	4	0	0	4	4	4	0	Tropomyosin
Hemerythrin	PF01814.18	gi|118576487|ref|YP_876230.1|	-	1.2	9.3	4.2	28	4.8	0.1	3.8	2	2	2	4	4	4	0	Hemerythrin	HHE	cation	binding	domain
FliJ	PF02050.11	gi|118576487|ref|YP_876230.1|	-	2.5	8.1	5.5	12	5.9	0.0	3.9	4	1	1	5	5	5	0	Flagellar	FliJ	protein
Myosin_tail_1	PF01576.14	gi|118576487|ref|YP_876230.1|	-	3.5	5.2	6.0	1.4	6.5	0.1	2.7	3	0	0	3	3	3	0	Myosin	tail
Prok-JAB	PF14464.1	gi|118576488|ref|YP_876231.1|	-	1.9e-11	43.4	0.0	2.3e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.16	gi|118576488|ref|YP_876231.1|	-	0.075	12.7	0.0	0.3	10.8	0.0	1.8	1	1	0	1	1	1	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
Toxin-JAB1	PF15659.1	gi|118576488|ref|YP_876231.1|	-	0.17	11.7	0.0	0.31	10.9	0.0	1.4	1	0	0	1	1	1	0	JAB-like	toxin	1
Peptidase_C74	PF12387.3	gi|118576489|ref|YP_876232.1|	-	0.035	13.2	1.2	0.046	12.8	0.8	1.1	1	0	0	1	1	1	0	Pestivirus	NS2	peptidase
Laminin_EGF	PF00053.19	gi|118576489|ref|YP_876232.1|	-	0.057	13.3	1.0	0.076	12.9	0.7	1.2	1	0	0	1	1	1	0	Laminin	EGF-like	(Domains	III	and	V)
Nramp	PF01566.13	gi|118576489|ref|YP_876232.1|	-	0.069	11.9	0.3	0.088	11.5	0.2	1.1	1	0	0	1	1	1	0	Natural	resistance-associated	macrophage	protein
TFIIS_C	PF01096.13	gi|118576489|ref|YP_876232.1|	-	0.081	12.5	3.0	0.91	9.2	0.0	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C3HC4_3	PF13920.1	gi|118576489|ref|YP_876232.1|	-	0.1	12.2	1.6	0.14	11.8	1.1	1.1	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-NADH-PPase	PF09297.6	gi|118576489|ref|YP_876232.1|	-	0.15	11.6	3.1	0.31	10.6	0.3	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|118576489|ref|YP_876232.1|	-	0.31	10.7	2.7	0.32	10.7	0.2	2.0	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn-ribbon_8	PF09723.5	gi|118576489|ref|YP_876232.1|	-	1.1	9.3	4.7	0.91	9.5	0.8	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-HIT	PF04438.11	gi|118576489|ref|YP_876232.1|	-	2.7	7.7	6.9	12	5.6	4.8	1.8	1	1	0	1	1	1	0	HIT	zinc	finger
Rubredoxin	PF00301.15	gi|118576489|ref|YP_876232.1|	-	4.6	7.1	6.3	10	6.1	0.4	2.1	1	1	1	2	2	2	0	Rubredoxin
Glyco_hydro_14	PF01373.12	gi|118576490|ref|YP_876233.1|	-	0.09	11.5	0.0	0.11	11.1	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	14
BPD_transp_1	PF00528.17	gi|118576491|ref|YP_876234.1|	-	5.9e-25	87.8	12.2	5.9e-25	87.8	8.5	2.0	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|118576492|ref|YP_876235.1|	-	3.8e-37	127.6	15.9	3.8e-37	127.6	11.0	1.7	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF1345	PF07077.6	gi|118576492|ref|YP_876235.1|	-	0.045	13.2	0.2	0.045	13.2	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1345)
His_binding	PF02098.11	gi|118576493|ref|YP_876236.1|	-	0.12	12.1	0.1	0.14	11.9	0.1	1.1	1	0	0	1	1	1	0	Tick	histamine	binding	protein
Sec61_beta	PF03911.11	gi|118576494|ref|YP_876237.1|	-	1.4e-16	59.9	0.3	1.6e-16	59.7	0.2	1.1	1	0	0	1	1	1	1	Sec61beta	family
DUF2070	PF09843.4	gi|118576495|ref|YP_876238.1|	-	9.8e-44	148.9	0.0	1.4e-43	148.4	0.0	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Mrr_cat	PF04471.7	gi|118576496|ref|YP_876239.1|	-	2.9e-05	23.8	0.0	4.8e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Restriction	endonuclease
Hjc	PF01870.13	gi|118576496|ref|YP_876239.1|	-	0.0093	15.5	0.0	0.016	14.7	0.0	1.4	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|118576496|ref|YP_876239.1|	-	0.12	12.6	0.0	0.16	12.2	0.0	1.3	1	0	0	1	1	1	0	Nuclease-related	domain
SBP_bac_5	PF00496.17	gi|118576497|ref|YP_876240.1|	-	8.6e-25	87.3	0.0	6.6e-20	71.2	0.0	3.7	3	1	0	3	3	3	3	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Methyltransf_23	PF13489.1	gi|118576498|ref|YP_876241.1|	-	1.3e-14	54.2	0.0	1.6e-14	53.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118576498|ref|YP_876241.1|	-	4.5e-10	40.0	0.0	7.8e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118576498|ref|YP_876241.1|	-	6.4e-10	38.8	0.0	1e-09	38.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|118576498|ref|YP_876241.1|	-	3.9e-09	36.8	0.0	8.4e-09	35.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118576498|ref|YP_876241.1|	-	3.7e-07	30.5	0.0	6.9e-07	29.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118576498|ref|YP_876241.1|	-	1.5e-06	28.4	0.0	4.4e-06	26.9	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_9	PF08003.6	gi|118576498|ref|YP_876241.1|	-	4.3e-05	22.3	0.0	6e-05	21.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
DOT1	PF08123.8	gi|118576498|ref|YP_876241.1|	-	0.0013	18.1	0.0	0.0017	17.7	0.0	1.1	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_4	PF02390.12	gi|118576498|ref|YP_876241.1|	-	0.024	13.6	0.0	0.081	11.9	0.0	1.7	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_32	PF13679.1	gi|118576498|ref|YP_876241.1|	-	0.035	13.7	0.0	0.051	13.2	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
AdoMet_MTase	PF07757.8	gi|118576498|ref|YP_876241.1|	-	0.055	13.5	0.0	0.1	12.7	0.0	1.4	1	0	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
MTS	PF05175.9	gi|118576498|ref|YP_876241.1|	-	0.059	12.7	0.0	0.089	12.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
MetW	PF07021.7	gi|118576498|ref|YP_876241.1|	-	0.062	12.6	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_26	PF13659.1	gi|118576498|ref|YP_876241.1|	-	0.12	12.4	0.1	0.33	10.9	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
rve	PF00665.21	gi|118576499|ref|YP_876242.1|	-	2.8e-09	37.1	0.0	5e-09	36.3	0.0	1.4	1	0	0	1	1	1	1	Integrase	core	domain
rve_3	PF13683.1	gi|118576499|ref|YP_876242.1|	-	6.2e-07	28.8	0.4	8.3e-06	25.2	0.1	2.7	2	1	0	2	2	2	1	Integrase	core	domain
FlgD_ig	PF13860.1	gi|118576500|ref|YP_876243.1|	-	0.00045	19.8	0.1	0.19	11.5	0.0	2.6	2	0	0	2	2	2	2	FlgD	Ig-like	domain
DUF4363	PF14276.1	gi|118576500|ref|YP_876243.1|	-	0.0039	16.8	0.0	0.087	12.5	0.0	3.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4363)
Nro1	PF12753.2	gi|118576500|ref|YP_876243.1|	-	0.013	14.4	0.7	2.3	7.0	0.1	2.5	2	0	0	2	2	2	0	Nuclear	pore	complex	subunit	Nro1
DAO	PF01266.19	gi|118576501|ref|YP_876244.1|	-	1.9e-08	33.6	1.5	2.4e-08	33.3	1.0	1.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|118576501|ref|YP_876244.1|	-	6.8e-06	24.9	0.1	9e-06	24.5	0.0	1.4	1	1	0	1	1	1	1	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|118576501|ref|YP_876244.1|	-	4.7e-05	22.6	0.1	4.7e-05	22.6	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|118576501|ref|YP_876244.1|	-	0.0064	15.4	0.0	0.011	14.6	0.0	1.3	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.14	gi|118576501|ref|YP_876244.1|	-	0.023	13.7	0.0	0.041	12.9	0.0	1.4	2	0	0	2	2	2	0	FAD	binding	domain
FAM74	PF15026.1	gi|118576503|ref|YP_876246.1|	-	0.051	13.2	0.0	0.064	12.8	0.0	1.1	1	0	0	1	1	1	0	FAM74	protein
CHIPS	PF11434.3	gi|118576506|ref|YP_876249.1|	-	0.1	12.2	0.0	0.12	12.0	0.0	1.1	1	0	0	1	1	1	0	Chemotaxis-inhibiting	protein	CHIPS
DUF3797	PF12677.2	gi|118576506|ref|YP_876249.1|	-	0.15	11.7	0.3	0.21	11.2	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3797)
adh_short_C2	PF13561.1	gi|118576507|ref|YP_876250.1|	-	2.3e-35	122.4	0.0	2.8e-35	122.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|118576507|ref|YP_876250.1|	-	5.9e-30	104.3	1.0	7.3e-30	104.0	0.7	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|118576507|ref|YP_876250.1|	-	1e-10	41.6	0.6	1.4e-10	41.1	0.4	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|118576507|ref|YP_876250.1|	-	3.4e-07	30.4	0.6	4.3e-07	30.1	0.4	1.5	1	1	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|118576507|ref|YP_876250.1|	-	8.9e-06	25.3	0.4	2.4e-05	23.8	0.3	1.8	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|118576507|ref|YP_876250.1|	-	0.008	14.9	0.0	0.011	14.4	0.0	1.3	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
THF_DHG_CYH_C	PF02882.14	gi|118576507|ref|YP_876250.1|	-	0.04	12.9	0.4	0.27	10.3	0.0	2.4	3	0	0	3	3	3	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NmrA	PF05368.8	gi|118576507|ref|YP_876250.1|	-	0.047	12.9	0.1	0.12	11.5	0.0	1.7	2	0	0	2	2	2	0	NmrA-like	family
Glyco_transf_9	PF01075.12	gi|118576507|ref|YP_876250.1|	-	0.054	12.6	0.0	0.081	12.1	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	family	9	(heptosyltransferase)
Glyco_tran_WecB	PF03808.8	gi|118576507|ref|YP_876250.1|	-	0.056	12.8	0.0	0.21	10.9	0.0	2.0	2	1	1	3	3	3	0	Glycosyl	transferase	WecB/TagA/CpsF	family
F420_oxidored	PF03807.12	gi|118576507|ref|YP_876250.1|	-	0.07	13.5	0.1	0.13	12.6	0.1	1.5	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DAO	PF01266.19	gi|118576507|ref|YP_876250.1|	-	0.086	11.7	0.0	0.089	11.6	0.0	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
PMSR	PF01625.16	gi|118576508|ref|YP_876251.1|	-	1.1e-60	204.0	0.1	1.2e-60	203.9	0.1	1.0	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
Usp	PF00582.21	gi|118576509|ref|YP_876252.1|	-	4.3e-30	104.7	0.0	4.9e-30	104.5	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Abhydrolase_6	PF12697.2	gi|118576510|ref|YP_876253.1|	-	3.7e-44	151.3	0.2	4.3e-44	151.0	0.1	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|118576510|ref|YP_876253.1|	-	8.2e-24	84.4	0.0	4.3e-14	52.6	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|118576510|ref|YP_876253.1|	-	1.4e-20	73.5	0.0	2.6e-20	72.6	0.0	1.4	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|118576510|ref|YP_876253.1|	-	2.6e-05	23.5	0.0	0.052	12.8	0.0	2.3	2	0	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_2	PF02230.11	gi|118576510|ref|YP_876253.1|	-	5.3e-05	22.7	0.0	0.67	9.3	0.0	3.0	3	0	0	3	3	3	2	Phospholipase/Carboxylesterase
Hydrolase_4	PF12146.3	gi|118576510|ref|YP_876253.1|	-	0.00083	19.1	0.0	0.0018	18.0	0.0	1.5	1	0	0	1	1	1	1	Putative	lysophospholipase
Peptidase_S9	PF00326.16	gi|118576510|ref|YP_876253.1|	-	0.0087	15.3	0.0	1.5	7.9	0.0	2.2	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
Thioesterase	PF00975.15	gi|118576510|ref|YP_876253.1|	-	0.019	15.1	0.1	0.023	14.9	0.0	1.2	1	0	0	1	1	1	0	Thioesterase	domain
Esterase	PF00756.15	gi|118576510|ref|YP_876253.1|	-	0.038	13.4	0.1	0.092	12.1	0.1	1.6	1	1	0	1	1	1	0	Putative	esterase
Abhydrolase_4	PF08386.5	gi|118576510|ref|YP_876253.1|	-	0.047	13.5	0.0	0.077	12.8	0.0	1.3	1	0	0	1	1	1	0	TAP-like	protein
Ndr	PF03096.9	gi|118576510|ref|YP_876253.1|	-	0.1	11.0	0.0	0.14	10.5	0.0	1.2	1	0	0	1	1	1	0	Ndr	family
Antitoxin-MazE	PF04014.13	gi|118576511|ref|YP_876254.1|	-	6.5e-06	25.7	0.2	9.7e-06	25.1	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DFP	PF04127.10	gi|118576511|ref|YP_876254.1|	-	0.027	14.1	0.0	0.039	13.5	0.0	1.2	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
AbrB-like	PF14250.1	gi|118576511|ref|YP_876254.1|	-	0.057	13.3	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	AbrB-like	transcriptional	regulator
Repressor_Mnt	PF11423.3	gi|118576511|ref|YP_876254.1|	-	0.085	12.1	0.3	3.2	7.1	0.1	2.5	2	0	0	2	2	2	0	Regulatory	protein	Mnt
DUF3452	PF11934.3	gi|118576512|ref|YP_876255.1|	-	0.06	12.6	0.8	0.21	10.9	0.1	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3452)
ATP-synt_ab	PF00006.20	gi|118576512|ref|YP_876255.1|	-	0.077	12.4	0.4	0.17	11.3	0.1	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Glucodextran_B	PF09136.5	gi|118576512|ref|YP_876255.1|	-	0.11	12.6	0.2	1.6	8.9	0.0	2.1	2	0	0	2	2	2	0	Glucodextranase,	domain	B
Abhydrolase_1	PF00561.15	gi|118576513|ref|YP_876256.1|	-	8.7e-10	38.5	0.0	1e-09	38.3	0.0	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.2	gi|118576513|ref|YP_876256.1|	-	9.9e-10	38.6	0.0	1.7e-09	37.9	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
PhaC_N	PF07167.8	gi|118576513|ref|YP_876256.1|	-	2.9e-09	36.6	0.0	4.6e-09	35.9	0.0	1.3	1	0	0	1	1	1	1	Poly-beta-hydroxybutyrate	polymerase	(PhaC)	N-terminus
Abhydrolase_5	PF12695.2	gi|118576513|ref|YP_876256.1|	-	7.2e-08	32.2	0.0	3.7e-07	30.0	0.0	1.9	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF3141	PF11339.3	gi|118576513|ref|YP_876256.1|	-	1.7e-05	23.3	0.0	5.4e-05	21.7	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3141)
DLH	PF01738.13	gi|118576513|ref|YP_876256.1|	-	0.0043	16.3	0.0	0.051	12.8	0.0	2.1	2	0	0	2	2	2	1	Dienelactone	hydrolase	family
PHB_depo_C	PF06850.6	gi|118576513|ref|YP_876256.1|	-	0.016	14.4	0.0	0.063	12.4	0.0	1.9	1	1	0	1	1	1	0	PHB	de-polymerase	C-terminus
AXE1	PF05448.7	gi|118576513|ref|YP_876256.1|	-	0.053	12.0	0.1	7.4	4.9	0.0	2.2	2	0	0	2	2	2	0	Acetyl	xylan	esterase	(AXE1)
BAAT_C	PF08840.6	gi|118576513|ref|YP_876256.1|	-	0.11	12.1	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
PHA_synth_III_E	PF09712.5	gi|118576514|ref|YP_876257.1|	-	7.1e-11	42.0	0.1	8.2e-11	41.8	0.1	1.1	1	0	0	1	1	1	1	Poly(R)-hydroxyalkanoic	acid	synthase	subunit	(PHA_synth_III_E)
Myb_DNA-bind_5	PF13873.1	gi|118576514|ref|YP_876257.1|	-	0.00022	21.0	0.6	0.0096	15.8	0.0	2.4	2	0	0	2	2	2	1	Myb/SANT-like	DNA-binding	domain
ATP-synt_B	PF00430.13	gi|118576514|ref|YP_876257.1|	-	0.013	15.2	1.9	0.029	14.1	1.3	1.5	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
Phasin	PF05597.6	gi|118576514|ref|YP_876257.1|	-	0.064	13.0	0.5	0.12	12.0	0.1	1.6	2	0	0	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
HalX	PF08663.5	gi|118576514|ref|YP_876257.1|	-	0.077	12.9	1.1	0.48	10.4	0.1	2.5	2	0	0	2	2	2	0	HalX	domain
PilJ	PF13675.1	gi|118576514|ref|YP_876257.1|	-	0.08	13.2	2.5	0.52	10.6	0.2	2.6	2	2	1	3	3	3	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF1311	PF07007.7	gi|118576514|ref|YP_876257.1|	-	0.2	11.7	1.3	0.2	11.7	0.2	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1311)
BMFP	PF04380.8	gi|118576514|ref|YP_876257.1|	-	0.35	11.0	2.9	0.6	10.2	0.5	2.3	2	1	1	3	3	3	0	Membrane	fusogenic	activity
TFIIB	PF00382.14	gi|118576516|ref|YP_876259.1|	-	8.1e-36	121.6	5.7	1.6e-19	69.5	0.4	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|118576516|ref|YP_876259.1|	-	3.5e-12	45.4	0.6	5.8e-12	44.7	0.4	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.18	gi|118576516|ref|YP_876259.1|	-	6.8e-06	25.6	0.2	0.00075	19.0	0.1	2.3	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
zf-ribbon_3	PF13248.1	gi|118576516|ref|YP_876259.1|	-	0.00015	20.8	1.5	0.00029	19.9	1.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|118576516|ref|YP_876259.1|	-	0.00093	18.5	1.9	0.0017	17.7	1.3	1.3	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Ribosomal_S27e	PF01667.12	gi|118576516|ref|YP_876259.1|	-	0.0033	16.9	2.1	0.0064	16.0	1.4	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
RRN7	PF11781.3	gi|118576516|ref|YP_876259.1|	-	0.017	14.5	0.2	0.037	13.5	0.1	1.6	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DZR	PF12773.2	gi|118576516|ref|YP_876259.1|	-	0.019	14.7	0.8	0.039	13.7	0.6	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|118576516|ref|YP_876259.1|	-	0.025	14.2	1.1	0.054	13.1	0.7	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Ribosomal_L37ae	PF01780.14	gi|118576516|ref|YP_876259.1|	-	0.054	13.3	0.3	0.19	11.6	0.2	1.9	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
Cys_rich_CPCC	PF14206.1	gi|118576516|ref|YP_876259.1|	-	0.085	12.4	0.4	0.2	11.2	0.3	1.6	1	0	0	1	1	1	0	Cysteine-rich	CPCC
Lar_restr_allev	PF14354.1	gi|118576516|ref|YP_876259.1|	-	0.11	12.8	0.4	0.3	11.4	0.3	1.7	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF329	PF03884.9	gi|118576516|ref|YP_876259.1|	-	0.17	11.4	1.6	0.34	10.4	1.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
DUF1610	PF07754.6	gi|118576516|ref|YP_876259.1|	-	0.18	11.9	2.3	6	7.0	0.2	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Auto_anti-p27	PF06677.7	gi|118576516|ref|YP_876259.1|	-	0.21	11.3	2.2	0.42	10.4	1.5	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_2	PF13240.1	gi|118576516|ref|YP_876259.1|	-	0.79	9.2	5.1	2.3	7.7	3.6	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF374	PF04028.8	gi|118576516|ref|YP_876259.1|	-	1.2	8.4	3.9	3.9	6.7	2.7	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF374)
TPR_11	PF13414.1	gi|118576519|ref|YP_876262.1|	-	3.3e-11	42.6	1.8	1.3e-05	24.7	0.1	2.4	2	0	0	2	2	2	2	TPR	repeat
TPR_1	PF00515.23	gi|118576519|ref|YP_876262.1|	-	3.3e-08	32.7	1.2	0.0041	16.6	0.1	3.8	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118576519|ref|YP_876262.1|	-	4.9e-08	33.4	18.5	1.3e-07	32.0	1.5	3.7	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118576519|ref|YP_876262.1|	-	1.2e-07	31.7	15.6	0.0014	19.0	0.3	4.3	2	1	2	4	4	3	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|118576519|ref|YP_876262.1|	-	3.4e-07	29.6	7.9	0.0024	17.6	0.3	4.0	4	0	0	4	4	4	2	Tetratricopeptide	repeat
Peptidase_M10	PF00413.19	gi|118576519|ref|YP_876262.1|	-	0.00026	20.7	0.0	0.0004	20.1	0.0	1.3	1	0	0	1	1	1	1	Matrixin
TPR_17	PF13431.1	gi|118576519|ref|YP_876262.1|	-	0.00068	19.6	4.4	0.27	11.5	0.0	4.0	4	0	0	4	4	4	1	Tetratricopeptide	repeat
Reprolysin_5	PF13688.1	gi|118576519|ref|YP_876262.1|	-	0.00069	19.5	0.0	0.0011	18.9	0.0	1.3	1	0	0	1	1	1	1	Metallo-peptidase	family	M12
TPR_7	PF13176.1	gi|118576519|ref|YP_876262.1|	-	0.00081	19.0	0.9	1.6	8.7	0.1	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118576519|ref|YP_876262.1|	-	0.00098	18.7	0.2	0.55	10.1	0.0	3.6	4	0	0	4	4	3	1	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118576519|ref|YP_876262.1|	-	0.0022	17.8	0.4	0.0022	17.8	0.3	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
Reprolysin_2	PF13574.1	gi|118576519|ref|YP_876262.1|	-	0.0026	17.8	0.5	0.004	17.2	0.4	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Fis1_TPR_C	PF14853.1	gi|118576519|ref|YP_876262.1|	-	0.0056	16.5	0.3	3.2	7.6	0.0	2.6	2	0	0	2	2	2	1	Fis1	C-terminal	tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118576519|ref|YP_876262.1|	-	0.0059	16.9	0.6	0.16	12.5	0.0	2.9	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118576519|ref|YP_876262.1|	-	0.013	15.8	10.0	0.45	10.8	0.6	2.8	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Peptidase_M57	PF12388.3	gi|118576519|ref|YP_876262.1|	-	0.015	14.6	0.1	0.024	13.9	0.0	1.2	1	0	0	1	1	1	0	Dual-action	HEIGH	metallo-peptidase
TPR_12	PF13424.1	gi|118576519|ref|YP_876262.1|	-	0.018	14.9	5.7	0.19	11.7	0.8	2.7	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Peptidase_M54	PF07998.6	gi|118576519|ref|YP_876262.1|	-	0.031	14.0	0.1	0.046	13.4	0.0	1.2	1	0	0	1	1	1	0	Peptidase	family	M54
Metallopep	PF12044.3	gi|118576519|ref|YP_876262.1|	-	0.038	12.4	0.2	0.068	11.6	0.1	1.3	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin_3	PF13582.1	gi|118576519|ref|YP_876262.1|	-	0.1	13.1	0.4	0.18	12.3	0.3	1.4	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_4	PF13583.1	gi|118576519|ref|YP_876262.1|	-	0.12	11.8	0.1	0.19	11.2	0.1	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Astacin	PF01400.19	gi|118576519|ref|YP_876262.1|	-	0.12	11.7	0.1	0.19	11.1	0.0	1.2	1	0	0	1	1	1	0	Astacin	(Peptidase	family	M12A)
Peptidase_M66	PF10462.4	gi|118576519|ref|YP_876262.1|	-	0.17	10.7	0.1	0.26	10.1	0.1	1.2	1	0	0	1	1	1	0	Peptidase	M66
Peptidase_M43	PF05572.8	gi|118576519|ref|YP_876262.1|	-	0.22	11.1	0.1	0.38	10.3	0.0	1.3	1	0	0	1	1	1	0	Pregnancy-associated	plasma	protein-A
Syntaxin	PF00804.20	gi|118576520|ref|YP_876263.1|	-	0.015	15.4	0.9	0.11	12.6	0.2	2.0	1	1	1	2	2	2	0	Syntaxin
COMP	PF11598.3	gi|118576520|ref|YP_876263.1|	-	0.018	15.1	1.1	4.9	7.3	0.0	2.3	2	1	0	2	2	2	0	Cartilage	oligomeric	matrix	protein
DUF342	PF03961.8	gi|118576520|ref|YP_876263.1|	-	0.019	13.4	0.3	0.021	13.2	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF972	PF06156.8	gi|118576520|ref|YP_876263.1|	-	0.068	13.5	0.3	5.9	7.2	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Sof1	PF04158.9	gi|118576520|ref|YP_876263.1|	-	0.11	12.4	0.1	0.18	11.8	0.1	1.3	1	0	0	1	1	1	0	Sof1-like	domain
Prefoldin_2	PF01920.15	gi|118576520|ref|YP_876263.1|	-	0.13	11.9	0.7	2	8.2	0.0	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
TBPIP	PF07106.8	gi|118576520|ref|YP_876263.1|	-	0.17	11.4	0.7	0.85	9.1	0.2	1.9	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
BPL_LplA_LipB	PF03099.14	gi|118576521|ref|YP_876264.1|	-	3.5e-23	81.9	0.0	5.8e-23	81.2	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
HTH_11	PF08279.7	gi|118576521|ref|YP_876264.1|	-	6.1e-12	45.0	0.0	1.4e-11	43.8	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
BPL_C	PF02237.12	gi|118576521|ref|YP_876264.1|	-	1.6e-06	27.6	0.3	4.5e-06	26.2	0.2	1.7	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
HTH_10	PF04967.7	gi|118576521|ref|YP_876264.1|	-	0.0029	17.1	0.0	0.014	15.0	0.0	2.1	2	0	0	2	2	2	1	HTH	DNA	binding	domain
DUF2642	PF10842.3	gi|118576521|ref|YP_876264.1|	-	0.009	15.4	0.0	0.019	14.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2642)
Rrf2	PF02082.15	gi|118576521|ref|YP_876264.1|	-	0.018	15.1	0.1	0.088	12.9	0.0	2.1	2	0	0	2	2	2	0	Transcriptional	regulator
DUF603	PF04645.7	gi|118576521|ref|YP_876264.1|	-	0.095	12.6	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF603
DUF4423	PF14394.1	gi|118576522|ref|YP_876265.1|	-	0.00012	21.7	0.1	0.00018	21.0	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
TrmB	PF01978.14	gi|118576522|ref|YP_876265.1|	-	0.0037	16.9	0.0	0.0056	16.3	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|118576522|ref|YP_876265.1|	-	0.0056	16.4	0.1	0.011	15.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|118576522|ref|YP_876265.1|	-	0.0079	16.2	0.1	0.014	15.4	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2250	PF10007.4	gi|118576522|ref|YP_876265.1|	-	0.0089	15.9	0.2	0.015	15.2	0.1	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|118576522|ref|YP_876265.1|	-	0.014	15.6	0.1	0.03	14.6	0.0	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
z-alpha	PF02295.12	gi|118576522|ref|YP_876265.1|	-	0.015	15.0	0.4	0.051	13.3	0.0	1.8	2	0	0	2	2	2	0	Adenosine	deaminase	z-alpha	domain
MarR_2	PF12802.2	gi|118576522|ref|YP_876265.1|	-	0.021	14.4	0.0	0.031	13.9	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Rio2_N	PF09202.6	gi|118576522|ref|YP_876265.1|	-	0.033	14.2	0.0	0.067	13.2	0.0	1.6	1	0	0	1	1	1	0	Rio2,	N-terminal
MarR	PF01047.17	gi|118576522|ref|YP_876265.1|	-	0.067	12.9	0.1	0.14	11.8	0.0	1.5	1	1	0	1	1	1	0	MarR	family
FeoC	PF09012.5	gi|118576522|ref|YP_876265.1|	-	0.069	12.8	0.7	0.13	12.0	0.1	1.7	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
Sulfolobus_pRN	PF05584.6	gi|118576522|ref|YP_876265.1|	-	0.079	12.9	0.1	0.12	12.3	0.1	1.3	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
CDC37_C	PF08564.5	gi|118576522|ref|YP_876265.1|	-	0.13	12.0	1.4	0.2	11.4	1.0	1.3	1	0	0	1	1	1	0	Cdc37	C	terminal	domain
A_deaminase_N	PF08451.6	gi|118576522|ref|YP_876265.1|	-	0.78	9.8	3.8	2.8	8.0	0.2	2.1	1	1	1	2	2	2	0	Adenosine/AMP	deaminase	N-terminal
CoA_binding_2	PF13380.1	gi|118576524|ref|YP_876267.1|	-	2.1e-15	56.8	0.0	2.3e-15	56.7	0.0	1.0	1	0	0	1	1	1	1	CoA	binding	domain
Glyco_hydro_57	PF03065.10	gi|118576524|ref|YP_876267.1|	-	0.071	12.0	0.0	0.08	11.8	0.0	1.0	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	57
Pterin_4a	PF01329.14	gi|118576525|ref|YP_876268.1|	-	0.089	12.5	0.0	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Pterin	4	alpha	carbinolamine	dehydratase
MMR_HSR1_C	PF08438.5	gi|118576526|ref|YP_876269.1|	-	1.8e-33	115.0	0.0	3.5e-33	114.0	0.0	1.5	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|118576526|ref|YP_876269.1|	-	2.2e-17	63.0	0.0	5.1e-16	58.6	0.0	2.3	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|118576526|ref|YP_876269.1|	-	1.2e-07	31.4	0.0	2.4e-07	30.4	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
GTP_EFTU	PF00009.22	gi|118576526|ref|YP_876269.1|	-	3.3e-06	26.6	0.0	0.033	13.6	0.0	2.5	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.13	gi|118576526|ref|YP_876269.1|	-	8.5e-06	25.1	0.0	0.00055	19.2	0.0	3.1	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|118576526|ref|YP_876269.1|	-	0.00026	20.8	0.0	0.15	11.8	0.0	2.9	2	1	0	3	3	3	1	Dynamin	family
MobB	PF03205.9	gi|118576526|ref|YP_876269.1|	-	0.13	11.9	0.1	0.27	10.9	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
tRNA-synt_1e	PF01406.14	gi|118576528|ref|YP_876271.1|	-	2.3e-112	375.0	0.0	2.7e-112	374.8	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|118576528|ref|YP_876271.1|	-	1.5e-11	43.5	0.1	4.2e-06	25.6	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|118576528|ref|YP_876271.1|	-	6.1e-05	21.8	0.1	0.018	13.7	0.1	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1	PF00133.17	gi|118576528|ref|YP_876271.1|	-	0.00067	17.7	0.1	0.0098	13.9	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.6	gi|118576528|ref|YP_876271.1|	-	0.0037	17.4	0.7	0.012	15.8	0.5	1.9	1	1	0	1	1	1	1	DALR	domain
tRNA-synt_1d	PF00750.14	gi|118576528|ref|YP_876271.1|	-	0.15	10.8	0.1	0.29	9.9	0.1	1.4	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
NAD_synthase	PF02540.12	gi|118576529|ref|YP_876272.1|	-	1.4e-67	227.1	0.0	1.6e-67	226.9	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|118576529|ref|YP_876272.1|	-	0.0061	15.1	0.1	0.018	13.6	0.1	1.7	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|118576529|ref|YP_876272.1|	-	0.021	14.3	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
SGL	PF08450.7	gi|118576530|ref|YP_876273.1|	-	6.7e-34	117.3	27.6	0.034	13.5	0.1	28.3	26	10	7	35	35	34	6	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|118576530|ref|YP_876273.1|	-	5.3e-16	58.3	0.9	69	3.5	0.0	20.2	24	0	0	24	24	23	0	Arylesterase
NHL	PF01436.16	gi|118576530|ref|YP_876273.1|	-	5.4e-10	38.7	43.2	0.00068	19.4	0.1	21.6	24	0	0	24	24	22	1	NHL	repeat
Str_synth	PF03088.11	gi|118576530|ref|YP_876273.1|	-	3.5e-09	36.5	0.0	31	4.6	0.0	14.9	18	0	0	18	18	14	0	Strictosidine	synthase
SBP56	PF05694.6	gi|118576530|ref|YP_876273.1|	-	2.1e-08	33.1	0.3	3.6	5.9	0.0	8.9	10	0	0	10	10	10	1	56kDa	selenium	binding	protein	(SBP56)
Trypan_PARP	PF05887.6	gi|118576530|ref|YP_876273.1|	-	3.9e-05	23.5	29.4	8.3e-05	22.4	20.4	1.5	1	0	0	1	1	1	1	Procyclic	acidic	repetitive	protein	(PARP)
Baculo_gp64	PF03273.8	gi|118576530|ref|YP_876273.1|	-	0.0036	15.5	0.1	8.4	4.4	0.0	4.4	6	0	0	6	6	6	1	Baculovirus	gp64	envelope	glycoprotein	family
DUF91	PF01939.11	gi|118576530|ref|YP_876273.1|	-	0.0046	16.1	0.0	29	3.6	0.0	5.3	6	0	0	6	6	6	0	Protein	of	unknown	function	DUF91
CRA	PF06589.6	gi|118576530|ref|YP_876273.1|	-	0.11	11.8	1.3	20	4.4	0.0	4.2	4	0	0	4	4	4	0	Circumsporozoite-related	antigen	(CRA)
NADH_Oxid_Nqo15	PF11497.3	gi|118576530|ref|YP_876273.1|	-	0.58	9.9	0.8	2.5e+02	1.3	0.0	6.1	7	0	0	7	7	7	0	NADH-quinone	oxidoreductase	chain	15
DUF2511	PF10709.4	gi|118576530|ref|YP_876273.1|	-	1.1	9.6	0.6	1e+03	0.1	0.0	4.9	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2511)
DUF4161	PF13722.1	gi|118576530|ref|YP_876273.1|	-	2.7	8.2	0.0	2e+02	2.2	0.0	3.6	5	0	0	5	5	4	0	C-terminal	domain	on	CstA	(DUF4161)
ThaI	PF15514.1	gi|118576530|ref|YP_876273.1|	-	4	6.6	0.0	5.4e+02	-0.3	0.0	4.2	5	0	0	5	5	4	0	Restriction	endonuclease	ThaI
DUF3143	PF11341.3	gi|118576530|ref|YP_876273.1|	-	4.1	7.3	0.6	2.7e+02	1.5	0.0	3.9	5	0	0	5	5	4	0	Protein	of	unknown	function	(DUF3143)
Ribosomal_L6	PF00347.18	gi|118576530|ref|YP_876273.1|	-	6.2	7.3	0.0	2.6e+03	-1.1	0.0	4.8	8	0	0	8	8	4	0	Ribosomal	protein	L6
DUF2173	PF09941.4	gi|118576530|ref|YP_876273.1|	-	6.4	6.7	0.7	4.6e+02	0.7	0.0	4.2	5	0	0	5	5	4	0	Uncharacterized	conserved	protein	(DUF2173)
DUF1861	PF08950.5	gi|118576530|ref|YP_876273.1|	-	7.3	5.2	0.1	4.1e+02	-0.5	0.0	3.5	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF1861)
PGK	PF00162.14	gi|118576531|ref|YP_876274.1|	-	8.7e-107	357.0	0.0	9.9e-107	356.8	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
DUF218	PF02698.12	gi|118576531|ref|YP_876274.1|	-	0.006	16.0	0.5	0.094	12.2	0.1	2.3	2	0	0	2	2	2	1	DUF218	domain
IBR	PF01485.16	gi|118576532|ref|YP_876275.1|	-	0.69	9.8	3.1	4.9	7.0	0.4	2.2	1	1	1	2	2	2	0	IBR	domain
Ribosomal_S27	PF01599.14	gi|118576532|ref|YP_876275.1|	-	1.8	8.4	6.7	3.5	7.5	0.4	2.3	2	0	0	2	2	2	0	Ribosomal	protein	S27a
NifU_N	PF01592.11	gi|118576533|ref|YP_876276.1|	-	3.2e-22	78.7	0.0	3.7e-22	78.5	0.0	1.0	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
Phos_pyr_kin	PF08543.7	gi|118576533|ref|YP_876276.1|	-	0.052	12.7	0.0	0.067	12.3	0.0	1.1	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
Aminotran_5	PF00266.14	gi|118576534|ref|YP_876277.1|	-	9.3e-146	485.3	0.0	1.1e-145	485.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|118576534|ref|YP_876277.1|	-	6.8e-07	28.7	0.0	1.8e-06	27.3	0.0	1.6	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|118576534|ref|YP_876277.1|	-	4.8e-05	22.5	0.0	6.5e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Pyridoxal_deC	PF00282.14	gi|118576534|ref|YP_876277.1|	-	0.00036	19.0	0.0	0.00058	18.4	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
SLA_LP_auto_ag	PF05889.8	gi|118576534|ref|YP_876277.1|	-	0.11	10.9	0.0	0.21	10.0	0.0	1.4	1	0	0	1	1	1	0	Soluble	liver	antigen/liver	pancreas	antigen	(SLA/LP	autoantigen)
Rieske	PF00355.21	gi|118576535|ref|YP_876278.1|	-	4.9e-13	48.4	0.0	5.2e-13	48.3	0.0	1.0	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|118576535|ref|YP_876278.1|	-	2.1e-09	37.0	0.0	2.5e-09	36.7	0.0	1.0	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
UPF0051	PF01458.12	gi|118576536|ref|YP_876279.1|	-	3.1e-66	223.1	0.0	3.8e-66	222.8	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|118576537|ref|YP_876280.1|	-	8.6e-70	234.7	0.2	1.2e-69	234.3	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
YcgL	PF05166.8	gi|118576537|ref|YP_876280.1|	-	0.0011	19.0	0.9	3.2	7.9	0.0	3.5	3	0	0	3	3	3	2	YcgL	domain
HEM4	PF02602.10	gi|118576538|ref|YP_876281.1|	-	3.6e-48	163.8	0.0	4.2e-48	163.5	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
TP_methylase	PF00590.15	gi|118576539|ref|YP_876282.1|	-	3.4e-49	167.3	0.0	3.9e-49	167.2	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NPL4	PF05021.10	gi|118576539|ref|YP_876282.1|	-	0.14	11.3	0.1	0.2	10.7	0.0	1.2	1	0	0	1	1	1	0	NPL4	family
Porphobil_deam	PF01379.15	gi|118576540|ref|YP_876283.1|	-	5.3e-61	205.2	0.0	6.6e-61	204.9	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|118576540|ref|YP_876283.1|	-	3.2e-10	39.9	0.1	6.1e-10	39.0	0.1	1.5	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
Aminotran_3	PF00202.16	gi|118576541|ref|YP_876284.1|	-	2.7e-61	207.3	0.0	3.6e-61	206.8	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Peripla_BP_6	PF13458.1	gi|118576542|ref|YP_876285.1|	-	3.9e-26	92.2	0.0	1.9e-25	89.9	0.0	1.8	1	1	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|118576542|ref|YP_876285.1|	-	8.7e-22	77.3	0.0	4.5e-21	75.0	0.0	1.8	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.1	gi|118576542|ref|YP_876285.1|	-	0.04	12.6	0.0	0.079	11.6	0.0	1.5	2	0	0	2	2	2	0	Periplasmic	binding	protein	domain
BC10	PF06726.7	gi|118576542|ref|YP_876285.1|	-	0.14	12.1	0.0	0.36	10.8	0.0	1.6	1	0	0	1	1	1	0	Bladder	cancer-related	protein	BC10
MIP	PF00230.15	gi|118576543|ref|YP_876286.1|	-	6.1e-35	120.7	22.5	8.5e-35	120.2	15.6	1.1	1	0	0	1	1	1	1	Major	intrinsic	protein
adh_short	PF00106.20	gi|118576544|ref|YP_876287.1|	-	8.4e-33	113.6	0.2	1.6e-32	112.7	0.1	1.5	2	0	0	2	2	2	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|118576544|ref|YP_876287.1|	-	1.8e-19	70.5	0.0	2.3e-19	70.1	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|118576544|ref|YP_876287.1|	-	7.2e-13	48.6	0.0	1.2e-12	47.8	0.0	1.3	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|118576544|ref|YP_876287.1|	-	2e-05	23.9	0.0	4.2e-05	22.8	0.0	1.6	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Eno-Rase_NADH_b	PF12242.3	gi|118576544|ref|YP_876287.1|	-	0.03	14.0	0.3	0.082	12.6	0.2	1.7	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
PD40	PF07676.7	gi|118576545|ref|YP_876288.1|	-	7.1e-05	22.3	6.8	48	3.7	0.0	8.0	9	0	0	9	9	9	1	WD40-like	Beta	Propeller	Repeat
WD40	PF00400.27	gi|118576545|ref|YP_876288.1|	-	0.018	14.8	0.0	23	5.0	0.0	5.5	6	0	0	6	6	6	0	WD	domain,	G-beta	repeat
MtrE	PF04206.7	gi|118576546|ref|YP_876289.1|	-	0.016	14.2	0.0	0.021	13.8	0.0	1.1	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	E
UPF0697	PF15117.1	gi|118576546|ref|YP_876289.1|	-	0.086	12.6	0.0	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0697
DUF2834	PF11196.3	gi|118576546|ref|YP_876289.1|	-	0.095	12.8	0.4	0.13	12.4	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2834)
TM2	PF05154.11	gi|118576547|ref|YP_876290.1|	-	0.063	13.5	1.5	0.12	12.5	1.1	1.5	1	0	0	1	1	1	0	TM2	domain
VIT1	PF01988.14	gi|118576547|ref|YP_876290.1|	-	0.12	11.8	3.1	0.13	11.7	2.2	1.0	1	0	0	1	1	1	0	VIT	family
PepSY_2	PF13670.1	gi|118576550|ref|YP_876293.1|	-	0.018	14.9	0.3	0.021	14.6	0.2	1.1	1	0	0	1	1	1	0	Peptidase	propeptide	and	YPEB	domain
PhoU	PF01895.14	gi|118576551|ref|YP_876294.1|	-	8.8e-19	67.7	1.5	1.2e-09	38.4	0.9	2.1	2	0	0	2	2	2	2	PhoU	domain
DUF2482	PF10655.4	gi|118576551|ref|YP_876294.1|	-	0.02	14.9	0.0	0.034	14.1	0.0	1.4	1	0	0	1	1	1	0	Hypothetical	protein	of	unknown	function	(DUF2482)
HSCB_C	PF07743.8	gi|118576551|ref|YP_876294.1|	-	0.026	14.9	0.1	0.72	10.3	0.1	2.3	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
N6_N4_Mtase	PF01555.13	gi|118576552|ref|YP_876295.1|	-	2.4e-36	125.3	0.1	3e-36	125.0	0.0	1.1	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576552|ref|YP_876295.1|	-	6.2e-10	39.1	0.0	3e-05	24.0	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576552|ref|YP_876295.1|	-	4.3e-05	23.1	0.0	0.27	10.8	0.0	2.5	3	0	0	3	3	3	2	Putative	RNA	methylase	family	UPF0020
N6_Mtase	PF02384.11	gi|118576552|ref|YP_876295.1|	-	0.051	12.6	0.0	4.2	6.3	0.0	2.3	2	0	0	2	2	2	0	N-6	DNA	Methylase
MTS	PF05175.9	gi|118576552|ref|YP_876295.1|	-	0.077	12.3	0.0	0.54	9.6	0.0	2.3	2	1	0	2	2	2	0	Methyltransferase	small	domain
NAD_kinase	PF01513.16	gi|118576553|ref|YP_876296.1|	-	5.2e-32	110.7	0.7	6e-32	110.5	0.5	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|118576553|ref|YP_876296.1|	-	0.039	13.3	0.2	0.07	12.5	0.1	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
BTB_2	PF02214.17	gi|118576553|ref|YP_876296.1|	-	0.11	12.6	0.0	0.19	11.9	0.0	1.3	1	0	0	1	1	1	0	BTB/POZ	domain
Glyco_trans_1_3	PF13528.1	gi|118576554|ref|YP_876297.1|	-	8.5e-13	48.1	0.0	1.4e-12	47.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|118576554|ref|YP_876297.1|	-	4.4e-08	32.9	0.0	6.5e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_4	PF13692.1	gi|118576554|ref|YP_876297.1|	-	0.0048	17.0	0.0	0.009	16.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
AA_kinase	PF00696.23	gi|118576555|ref|YP_876298.1|	-	8e-23	81.2	0.2	1.9e-22	80.0	0.1	1.6	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|118576555|ref|YP_876298.1|	-	0.084	12.3	0.4	0.2	11.1	0.3	1.6	1	0	0	1	1	1	0	ACT	domain
MTH865	PF07747.6	gi|118576555|ref|YP_876298.1|	-	0.11	12.1	0.1	0.31	10.7	0.0	1.7	2	0	0	2	2	2	0	MTH865-like	family
DUF1170	PF06663.8	gi|118576556|ref|YP_876299.1|	-	4e-05	23.6	12.0	1	9.2	0.2	4.0	1	1	3	4	4	4	4	Protein	of	unknown	function	(DUF1170)
PPO1_DWL	PF12142.3	gi|118576556|ref|YP_876299.1|	-	0.0061	16.0	0.0	1e+02	2.5	0.0	4.1	4	0	0	4	4	4	0	Polyphenol	oxidase	middle	domain
DUF4555	PF15093.1	gi|118576556|ref|YP_876299.1|	-	0.034	13.0	10.0	13	4.6	0.1	4.1	1	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4555)
TPR_4	PF07721.9	gi|118576556|ref|YP_876299.1|	-	0.2	12.2	2.3	3.4e+02	2.1	0.0	3.9	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Aminotran_4	PF01063.14	gi|118576559|ref|YP_876302.1|	-	3.9e-45	154.1	0.0	4.6e-45	153.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	IV
KRBA1	PF15287.1	gi|118576560|ref|YP_876303.1|	-	0.08	12.3	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	KRBA1	family	repeat
Cys_rich_CWC	PF14375.1	gi|118576560|ref|YP_876303.1|	-	3.4	7.6	6.9	8	6.4	4.8	1.7	1	1	0	1	1	1	0	Cysteine-rich	CWC
Methyltransf_11	PF08241.7	gi|118576561|ref|YP_876304.1|	-	1.1e-09	38.6	0.0	1.7e-09	38.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118576561|ref|YP_876304.1|	-	1.8e-08	34.0	0.0	2.3e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118576561|ref|YP_876304.1|	-	1.8e-07	31.4	0.0	3.3e-07	30.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|118576561|ref|YP_876304.1|	-	0.00015	22.2	0.0	0.00024	21.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118576561|ref|YP_876304.1|	-	0.00051	20.4	0.0	0.00079	19.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|118576561|ref|YP_876304.1|	-	0.00064	18.9	0.0	0.00093	18.3	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|118576561|ref|YP_876304.1|	-	0.14	12.2	0.0	0.2	11.7	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Rhodanese	PF00581.15	gi|118576562|ref|YP_876305.1|	-	9.2e-37	125.8	0.0	2.6e-22	79.2	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
Arginase	PF00491.16	gi|118576564|ref|YP_876307.1|	-	2.5e-68	230.3	1.3	2.8e-68	230.2	0.9	1.0	1	0	0	1	1	1	1	Arginase	family
CDP-OH_P_transf	PF01066.16	gi|118576565|ref|YP_876308.1|	-	8.1e-15	54.9	7.5	1.8e-14	53.8	5.2	1.6	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
VirB3	PF05101.8	gi|118576565|ref|YP_876308.1|	-	2.7	8.0	10.6	8.9	6.3	1.6	3.2	3	0	0	3	3	3	0	Type	IV	secretory	pathway,	VirB3-like	protein
Ribosomal_S26e	PF01283.14	gi|118576566|ref|YP_876309.1|	-	4.6e-32	110.6	1.0	5e-32	110.5	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
Fer4_10	PF13237.1	gi|118576566|ref|YP_876309.1|	-	0.063	13.0	0.8	1.8	8.3	0.6	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
PHD	PF00628.24	gi|118576566|ref|YP_876309.1|	-	0.066	12.9	0.2	11	5.8	0.0	2.2	2	0	0	2	2	2	0	PHD-finger
zf-ribbon_3	PF13248.1	gi|118576566|ref|YP_876309.1|	-	0.11	11.6	0.3	0.11	11.6	0.2	1.7	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|118576566|ref|YP_876309.1|	-	0.27	10.9	1.5	0.63	9.7	0.2	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118576566|ref|YP_876309.1|	-	0.39	10.3	2.0	0.64	9.6	0.3	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
ThiS	PF02597.15	gi|118576567|ref|YP_876310.1|	-	4.4e-13	49.4	0.1	2.1e-12	47.2	0.1	2.1	2	0	0	2	2	2	1	ThiS	family
CGI-121	PF08617.5	gi|118576567|ref|YP_876310.1|	-	2.4e-06	27.3	0.0	3.8e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
Urm1	PF09138.6	gi|118576567|ref|YP_876310.1|	-	0.00097	19.2	0.0	0.0052	16.8	0.0	2.0	2	0	0	2	2	2	1	Urm1	(Ubiquitin	related	modifier)
THUMP	PF02926.12	gi|118576568|ref|YP_876311.1|	-	2.4e-08	33.9	0.0	3e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	THUMP	domain
IlvN	PF07991.7	gi|118576569|ref|YP_876312.1|	-	8.4e-65	217.1	0.3	1.1e-64	216.7	0.2	1.1	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|118576569|ref|YP_876312.1|	-	1e-47	161.7	0.0	1.5e-47	161.1	0.0	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.14	gi|118576569|ref|YP_876312.1|	-	3.1e-06	26.4	0.1	5.3e-06	25.7	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|118576569|ref|YP_876312.1|	-	9.5e-05	22.7	0.1	0.00021	21.6	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|118576569|ref|YP_876312.1|	-	0.00013	21.8	0.2	0.00027	20.8	0.1	1.6	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|118576569|ref|YP_876312.1|	-	0.0011	18.8	0.2	0.002	17.9	0.1	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
CTP_transf_2	PF01467.21	gi|118576570|ref|YP_876313.1|	-	3.6e-11	43.3	0.0	4.2e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
GTP_EFTU_D2	PF03144.20	gi|118576571|ref|YP_876314.1|	-	3.2e-11	43.1	0.2	7.6e-11	41.9	0.2	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|118576571|ref|YP_876314.1|	-	3.3e-06	26.6	0.3	1.1e-05	24.9	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
DUF900	PF05990.7	gi|118576572|ref|YP_876315.1|	-	7e-06	25.5	0.0	8.8e-06	25.2	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
Abhydrolase_6	PF12697.2	gi|118576572|ref|YP_876315.1|	-	0.00049	20.0	4.3	0.00062	19.7	3.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|118576572|ref|YP_876315.1|	-	0.00051	19.8	0.3	0.00068	19.4	0.2	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
LCAT	PF02450.10	gi|118576572|ref|YP_876315.1|	-	0.0051	15.8	0.0	0.0062	15.5	0.0	1.1	1	0	0	1	1	1	1	Lecithin:cholesterol	acyltransferase
Thioesterase	PF00975.15	gi|118576572|ref|YP_876315.1|	-	0.014	15.6	0.1	0.026	14.7	0.1	1.5	1	0	0	1	1	1	0	Thioesterase	domain
DUF726	PF05277.7	gi|118576572|ref|YP_876315.1|	-	0.015	14.2	0.1	0.019	13.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF726)
Abhydrolase_8	PF06259.7	gi|118576572|ref|YP_876315.1|	-	0.048	13.1	0.1	0.18	11.3	0.1	1.8	1	1	1	2	2	2	0	Alpha/beta	hydrolase
Abhydrolase_1	PF00561.15	gi|118576572|ref|YP_876315.1|	-	0.059	12.9	0.0	0.069	12.7	0.0	1.2	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
Transketolase_C	PF02780.15	gi|118576572|ref|YP_876315.1|	-	0.14	12.0	0.0	0.23	11.3	0.0	1.3	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
tRNA-synt_1g	PF09334.6	gi|118576573|ref|YP_876316.1|	-	4.5e-134	446.9	0.0	5.2e-134	446.7	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|118576573|ref|YP_876316.1|	-	5e-16	57.8	0.0	5.8e-08	31.2	0.0	3.8	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.14	gi|118576573|ref|YP_876316.1|	-	5.3e-10	38.9	0.0	0.00087	18.4	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|118576573|ref|YP_876316.1|	-	1.5e-06	27.1	0.0	0.12	11.0	0.0	3.1	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(K)
Anticodon_1	PF08264.8	gi|118576573|ref|YP_876316.1|	-	0.00011	22.0	0.0	0.00016	21.4	0.0	1.3	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
FhuF	PF06276.7	gi|118576573|ref|YP_876316.1|	-	0.06	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Ferric	iron	reductase	FhuF-like	transporter
zf-ribbon_3	PF13248.1	gi|118576573|ref|YP_876316.1|	-	6.9	6.0	9.1	1.5e+02	1.7	6.3	2.4	1	1	0	1	1	1	0	zinc-ribbon	domain
AdoHcyase	PF05221.12	gi|118576574|ref|YP_876317.1|	-	5.2e-52	176.4	0.0	6.4e-52	176.1	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|118576574|ref|YP_876317.1|	-	2.8e-51	173.5	0.2	4.6e-51	172.8	0.1	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|118576574|ref|YP_876317.1|	-	2.9e-10	39.5	0.1	6.7e-10	38.3	0.0	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|118576574|ref|YP_876317.1|	-	0.00011	21.6	0.0	0.00018	20.9	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
TrkA_N	PF02254.13	gi|118576574|ref|YP_876317.1|	-	0.0036	17.2	0.0	0.011	15.6	0.0	1.9	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|118576574|ref|YP_876317.1|	-	0.0066	16.0	0.2	0.022	14.3	0.1	1.9	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ADH_zinc_N	PF00107.21	gi|118576574|ref|YP_876317.1|	-	0.016	14.7	0.1	5.4	6.5	0.0	3.1	3	0	0	3	3	3	0	Zinc-binding	dehydrogenase
Rieske	PF00355.21	gi|118576575|ref|YP_876318.1|	-	2e-12	46.5	0.0	2.1e-12	46.4	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|118576575|ref|YP_876318.1|	-	8.1e-09	35.1	0.0	9.1e-09	34.9	0.0	1.0	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
PAP2	PF01569.16	gi|118576576|ref|YP_876319.1|	-	5.9e-21	74.4	1.7	5.9e-21	74.4	1.2	1.6	2	0	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.1	gi|118576576|ref|YP_876319.1|	-	6e-05	22.6	3.9	0.00017	21.1	2.7	1.7	1	1	0	1	1	1	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|118576576|ref|YP_876319.1|	-	0.066	13.4	1.4	0.52	10.6	0.0	2.3	2	0	0	2	2	2	0	PAP2	superfamily	C-terminal
Wzy_C	PF04932.10	gi|118576576|ref|YP_876319.1|	-	1.2	8.9	5.8	0.42	10.3	1.9	1.9	1	1	1	2	2	2	0	O-Antigen	ligase
FxsA	PF04186.8	gi|118576581|ref|YP_876324.1|	-	0.033	13.7	0.3	2.3	7.8	0.0	2.3	2	0	0	2	2	2	0	FxsA	cytoplasmic	membrane	protein
tRNA_anti-codon	PF01336.20	gi|118576582|ref|YP_876325.1|	-	5.6e-07	29.3	1.0	9.8e-07	28.5	0.7	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
JmjN	PF02375.12	gi|118576584|ref|YP_876327.1|	-	0.23	11.0	4.6	3.9	7.0	0.1	2.9	3	1	0	3	3	3	0	jmjN	domain
ALAD	PF00490.16	gi|118576585|ref|YP_876328.1|	-	3.4e-132	440.2	0.2	3.8e-132	440.0	0.2	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
MR_MLE_C	PF13378.1	gi|118576585|ref|YP_876328.1|	-	0.022	14.7	0.2	0.07	13.1	0.1	1.9	1	1	1	2	2	2	0	Enolase	C-terminal	domain-like
GlutR_N	PF05201.10	gi|118576586|ref|YP_876329.1|	-	2.2e-37	127.9	0.0	3.5e-37	127.3	0.0	1.3	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.15	gi|118576586|ref|YP_876329.1|	-	2.4e-20	72.3	0.2	3.9e-20	71.6	0.1	1.3	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Shikimate_DH	PF01488.15	gi|118576586|ref|YP_876329.1|	-	3.6e-20	72.4	0.0	6.2e-20	71.6	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_10	PF13460.1	gi|118576586|ref|YP_876329.1|	-	0.0028	17.6	0.0	0.0065	16.4	0.0	1.6	1	0	0	1	1	1	1	NADH(P)-binding
F420_oxidored	PF03807.12	gi|118576586|ref|YP_876329.1|	-	0.035	14.5	0.0	0.08	13.3	0.0	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.1	gi|118576587|ref|YP_876330.1|	-	4.4e-18	65.4	0.0	8.3e-18	64.5	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Sirohm_synth_M	PF14824.1	gi|118576587|ref|YP_876330.1|	-	7.1e-05	21.6	0.0	0.00019	20.3	0.0	1.8	1	0	0	1	1	1	1	Sirohaem	biosynthesis	protein	central
Cas_Csa5	PF09702.5	gi|118576587|ref|YP_876330.1|	-	0.0061	16.6	0.8	0.0061	16.6	0.5	1.7	2	0	0	2	2	2	1	CRISPR-associated	protein	(Cas_Csa5)
Shikimate_DH	PF01488.15	gi|118576587|ref|YP_876330.1|	-	0.009	16.1	0.0	0.014	15.5	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.13	gi|118576587|ref|YP_876330.1|	-	0.081	12.9	0.2	0.32	10.9	0.1	2.0	1	1	0	1	1	1	0	TrkA-N	domain
Phage_Mu_F	PF04233.9	gi|118576587|ref|YP_876330.1|	-	0.1	13.1	0.6	0.19	12.2	0.4	1.4	1	0	0	1	1	1	0	Phage	Mu	protein	F	like	protein
ADH_N	PF08240.7	gi|118576590|ref|YP_876333.1|	-	4.2e-33	113.3	0.1	7.1e-33	112.6	0.1	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|118576590|ref|YP_876333.1|	-	4.6e-29	100.5	0.6	6.5e-29	100.1	0.4	1.2	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|118576590|ref|YP_876333.1|	-	8.8e-09	36.3	0.0	1.6e-08	35.5	0.0	1.5	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
3HCDH_N	PF02737.13	gi|118576590|ref|YP_876333.1|	-	0.042	13.4	0.6	0.063	12.9	0.4	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Methyltransf_18	PF12847.2	gi|118576590|ref|YP_876333.1|	-	0.046	14.3	0.1	0.095	13.2	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
TrkA_N	PF02254.13	gi|118576590|ref|YP_876333.1|	-	0.084	12.8	0.1	0.2	11.6	0.1	1.6	1	0	0	1	1	1	0	TrkA-N	domain
NADH_4Fe-4S	PF10589.4	gi|118576590|ref|YP_876333.1|	-	0.33	10.1	4.9	0.84	8.8	3.4	1.7	1	0	0	1	1	1	0	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
ScpA_ScpB	PF02616.9	gi|118576591|ref|YP_876334.1|	-	7.1e-09	35.6	0.0	4.1e-05	23.2	0.0	2.1	2	0	0	2	2	2	2	ScpA/B	protein
DUF387	PF04079.11	gi|118576592|ref|YP_876335.1|	-	1e-34	119.1	0.0	1.3e-34	118.8	0.0	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
Ribosomal_S8e	PF01201.17	gi|118576593|ref|YP_876336.1|	-	3.7e-22	78.8	3.5	4.1e-22	78.7	2.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
McrBC	PF10117.4	gi|118576593|ref|YP_876336.1|	-	0.035	13.0	0.0	0.043	12.7	0.0	1.0	1	0	0	1	1	1	0	McrBC	5-methylcytosine	restriction	system	component
SRP19	PF01922.12	gi|118576594|ref|YP_876337.1|	-	4.2e-17	62.5	0.0	4.9e-17	62.2	0.0	1.1	1	0	0	1	1	1	1	SRP19	protein
Gar1	PF04410.9	gi|118576595|ref|YP_876338.1|	-	0.00021	20.8	0.0	0.00022	20.7	0.0	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
TFIIB	PF00382.14	gi|118576596|ref|YP_876339.1|	-	9.3e-18	63.8	0.8	3.3e-09	36.4	0.2	2.6	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|118576596|ref|YP_876339.1|	-	4.7e-11	41.8	5.2	2.7e-10	39.3	1.2	2.4	2	0	0	2	2	2	1	TFIIB	zinc-binding
RRN7	PF11781.3	gi|118576596|ref|YP_876339.1|	-	0.011	15.2	6.9	0.057	12.9	0.1	3.2	2	1	1	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zinc_ribbon_2	PF13240.1	gi|118576596|ref|YP_876339.1|	-	0.034	13.6	1.4	0.12	11.8	0.1	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|118576596|ref|YP_876339.1|	-	0.067	12.9	5.2	0.071	12.8	0.9	2.5	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DZR	PF12773.2	gi|118576596|ref|YP_876339.1|	-	0.3	10.9	5.5	0.2	11.5	0.5	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|118576596|ref|YP_876339.1|	-	0.33	10.2	7.0	0.16	11.1	1.3	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|118576596|ref|YP_876339.1|	-	0.34	10.4	2.1	0.83	9.1	0.0	2.2	2	0	0	2	2	2	0	Transposase	zinc-binding	domain
RNA_POL_M_15KD	PF02150.11	gi|118576596|ref|YP_876339.1|	-	0.41	10.3	1.9	2.3	7.9	0.5	2.4	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.6	gi|118576596|ref|YP_876339.1|	-	0.61	9.7	4.1	0.43	10.2	0.3	2.2	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Spt4	PF06093.8	gi|118576596|ref|YP_876339.1|	-	1	9.3	8.7	0.64	9.9	0.8	3.1	2	2	1	3	3	3	0	Spt4/RpoE2	zinc	finger
zinc-ribbons_6	PF07191.7	gi|118576596|ref|YP_876339.1|	-	1.1	9.0	4.8	0.31	10.8	0.5	2.0	2	0	0	2	2	2	0	zinc-ribbons
ABC_tran	PF00005.22	gi|118576597|ref|YP_876340.1|	-	2.1e-20	73.4	0.0	3.2e-20	72.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576597|ref|YP_876340.1|	-	2.3e-11	44.1	0.1	1.7e-09	38.0	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|118576597|ref|YP_876340.1|	-	1.3e-10	40.8	0.2	1.8e-05	24.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_33	PF13671.1	gi|118576597|ref|YP_876340.1|	-	0.00011	22.1	0.0	0.00015	21.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|118576597|ref|YP_876340.1|	-	0.00018	20.9	0.1	0.00041	19.8	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|118576597|ref|YP_876340.1|	-	0.0012	19.1	0.1	0.8	10.0	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|118576597|ref|YP_876340.1|	-	0.0014	18.0	0.1	0.0035	16.7	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
MutS_V	PF00488.16	gi|118576597|ref|YP_876340.1|	-	0.0015	17.9	0.1	1.2	8.5	0.0	2.1	2	0	0	2	2	2	2	MutS	domain	V
AAA_23	PF13476.1	gi|118576597|ref|YP_876340.1|	-	0.0047	17.2	0.6	0.014	15.6	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|118576597|ref|YP_876340.1|	-	0.0094	16.7	0.2	0.021	15.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|118576597|ref|YP_876340.1|	-	0.01	15.7	0.0	0.059	13.2	0.0	2.0	1	1	0	2	2	2	0	AAA	domain
AAA_13	PF13166.1	gi|118576597|ref|YP_876340.1|	-	0.017	13.6	1.2	0.099	11.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|118576597|ref|YP_876340.1|	-	0.022	14.9	0.2	0.67	10.1	0.1	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|118576597|ref|YP_876340.1|	-	0.024	14.6	0.1	0.089	12.7	0.0	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF258	PF03193.11	gi|118576597|ref|YP_876340.1|	-	0.027	13.6	0.0	0.053	12.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|118576597|ref|YP_876340.1|	-	0.078	13.1	0.1	0.15	12.2	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|118576597|ref|YP_876340.1|	-	0.094	11.8	0.1	8.1	5.4	0.0	2.2	2	0	0	2	2	2	0	KaiC
T2SE	PF00437.15	gi|118576597|ref|YP_876340.1|	-	0.11	11.3	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|118576597|ref|YP_876340.1|	-	0.12	12.2	0.0	0.35	10.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.17	gi|118576597|ref|YP_876340.1|	-	0.14	12.3	0.0	0.36	11.0	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Cna_B	PF05738.8	gi|118576598|ref|YP_876341.1|	-	0.0072	16.0	0.1	0.018	14.8	0.0	1.6	1	0	0	1	1	1	1	Cna	protein	B-type	domain
Baculo_PEP_C	PF04513.7	gi|118576598|ref|YP_876341.1|	-	0.0097	15.7	3.2	0.019	14.7	2.2	1.4	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Hemagglutinin	PF00509.13	gi|118576598|ref|YP_876341.1|	-	0.098	10.7	0.1	0.14	10.3	0.1	1.2	1	0	0	1	1	1	0	Haemagglutinin
Reo_sigmaC	PF04582.7	gi|118576598|ref|YP_876341.1|	-	0.16	11.1	5.9	0.04	13.1	1.8	1.6	2	0	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
NPV_P10	PF05531.7	gi|118576598|ref|YP_876341.1|	-	0.21	11.8	2.2	11	6.3	1.5	2.5	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
SNARE	PF05739.14	gi|118576598|ref|YP_876341.1|	-	1.1	8.9	3.2	27	4.5	2.3	2.4	1	1	0	1	1	1	0	SNARE	domain
Chlor_dismutase	PF06778.7	gi|118576599|ref|YP_876342.1|	-	4.2e-49	166.8	0.0	5.2e-49	166.5	0.0	1.1	1	0	0	1	1	1	1	Chlorite	dismutase
Cas_Cas02710	PF09670.5	gi|118576600|ref|YP_876343.1|	-	0.005	15.5	0.0	0.0073	14.9	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DrrA_P4M	PF14860.1	gi|118576600|ref|YP_876343.1|	-	0.068	12.9	0.2	0.14	11.9	0.2	1.5	1	0	0	1	1	1	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
Asparaginase_2	PF01112.13	gi|118576602|ref|YP_876345.1|	-	8.8e-55	185.6	17.5	2.2e-29	102.1	7.6	2.0	1	1	1	2	2	2	2	Asparaginase
RNA_pol_L_2	PF13656.1	gi|118576603|ref|YP_876346.1|	-	1.8e-18	65.7	0.0	2.1e-18	65.5	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|118576603|ref|YP_876346.1|	-	0.061	12.4	0.0	0.08	12.0	0.0	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
TFIIS_C	PF01096.13	gi|118576604|ref|YP_876347.1|	-	4.8e-21	74.0	14.3	1e-20	73.0	2.8	3.0	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.11	gi|118576604|ref|YP_876347.1|	-	5.9e-06	25.8	6.1	2.6e-05	23.7	0.8	2.8	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
DZR	PF12773.2	gi|118576604|ref|YP_876347.1|	-	1.3e-05	24.9	8.6	0.00017	21.3	0.9	2.4	2	1	0	2	2	2	2	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|118576604|ref|YP_876347.1|	-	0.00027	20.5	1.1	0.00027	20.5	0.8	2.8	3	0	0	3	3	3	1	Prokaryotic	RING	finger	family	1
Zn_Tnp_IS1595	PF12760.2	gi|118576604|ref|YP_876347.1|	-	0.0025	17.5	12.8	0.074	12.8	0.6	3.3	2	1	1	3	3	3	2	Transposase	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|118576604|ref|YP_876347.1|	-	0.0034	16.7	9.6	0.8	9.2	0.0	4.1	4	0	0	4	4	4	1	A2L	zinc	ribbon	domain
zinc-ribbons_6	PF07191.7	gi|118576604|ref|YP_876347.1|	-	0.016	14.9	0.6	0.016	14.9	0.4	2.6	2	1	1	3	3	3	0	zinc-ribbons
zinc_ribbon_4	PF13717.1	gi|118576604|ref|YP_876347.1|	-	0.028	14.0	15.9	0.49	10.1	0.6	4.1	3	1	0	3	3	3	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|118576604|ref|YP_876347.1|	-	0.052	13.2	1.7	0.052	13.2	1.2	2.7	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
zf-DNA_Pol	PF08996.5	gi|118576604|ref|YP_876347.1|	-	0.053	12.8	0.1	0.053	12.8	0.1	1.8	2	1	0	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
Zn-ribbon_8	PF09723.5	gi|118576604|ref|YP_876347.1|	-	0.054	13.4	13.9	7.5	6.5	0.0	4.0	3	1	0	3	3	3	0	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118576604|ref|YP_876347.1|	-	0.06	12.9	16.6	0.59	9.7	0.7	4.0	3	1	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118576604|ref|YP_876347.1|	-	0.077	12.5	15.9	0.51	9.8	5.0	3.6	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|118576604|ref|YP_876347.1|	-	0.17	11.1	17.6	0.11	11.7	5.5	3.4	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-Mss51	PF13824.1	gi|118576604|ref|YP_876347.1|	-	0.21	11.4	5.2	7.2	6.5	0.7	2.9	3	0	0	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
PHF5	PF03660.9	gi|118576604|ref|YP_876347.1|	-	0.25	11.3	3.2	2.4	8.2	0.2	2.1	1	1	0	2	2	2	0	PHF5-like	protein
zf-C3HC4	PF00097.20	gi|118576604|ref|YP_876347.1|	-	0.36	10.5	9.4	0.39	10.4	1.5	3.0	3	0	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-GRF	PF06839.7	gi|118576604|ref|YP_876347.1|	-	0.37	10.7	0.1	0.37	10.7	0.1	2.7	3	0	0	3	3	3	0	GRF	zinc	finger
DUF2082	PF09855.4	gi|118576604|ref|YP_876347.1|	-	0.38	10.6	12.1	5.4	6.9	0.2	4.0	3	1	1	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF2039	PF10217.4	gi|118576604|ref|YP_876347.1|	-	0.4	10.7	5.0	6.1	6.9	0.3	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
UPF0547	PF10571.4	gi|118576604|ref|YP_876347.1|	-	0.43	10.3	12.0	2.2	8.0	0.1	3.9	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
IBR	PF01485.16	gi|118576604|ref|YP_876347.1|	-	0.72	9.7	9.8	5	7.0	3.6	2.9	2	1	0	2	2	2	0	IBR	domain
Baculo_ME53	PF06061.6	gi|118576604|ref|YP_876347.1|	-	0.91	8.4	3.1	1.8	7.4	0.3	2.1	2	0	0	2	2	2	0	Baculoviridae	ME53
HypA	PF01155.14	gi|118576604|ref|YP_876347.1|	-	1.4	8.5	9.5	0.35	10.5	0.7	2.6	2	1	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DUF2387	PF09526.5	gi|118576604|ref|YP_876347.1|	-	1.6	8.7	13.9	9.8	6.1	2.1	3.5	1	1	1	3	3	3	0	Probable	metal-binding	protein	(DUF2387)
Elf1	PF05129.8	gi|118576604|ref|YP_876347.1|	-	1.6	8.4	5.8	0.72	9.5	0.3	2.6	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
DNA_RNApol_7kD	PF03604.8	gi|118576604|ref|YP_876347.1|	-	1.6	8.2	12.1	5.9	6.4	0.1	3.2	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
C1_4	PF07975.7	gi|118576604|ref|YP_876347.1|	-	1.9	8.5	6.5	5.1	7.1	0.0	3.1	3	1	0	3	3	3	0	TFIIH	C1-like	domain
Ribosomal_L37e	PF01907.14	gi|118576604|ref|YP_876347.1|	-	2.2	8.1	6.8	15	5.4	0.7	2.8	3	0	0	3	3	3	0	Ribosomal	protein	L37e
zf-C4_Topoisom	PF01396.14	gi|118576604|ref|YP_876347.1|	-	3	7.4	12.5	14	5.3	0.1	3.4	3	1	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
PolC_DP2	PF03833.8	gi|118576604|ref|YP_876347.1|	-	3	5.3	5.1	2.5	5.6	0.1	1.9	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Rubredoxin	PF00301.15	gi|118576604|ref|YP_876347.1|	-	4.4	7.2	8.9	3.5	7.5	0.1	3.8	4	0	0	4	4	4	0	Rubredoxin
zf-C3HC4_2	PF13923.1	gi|118576604|ref|YP_876347.1|	-	4.7	7.3	7.6	2.8	8.0	0.8	2.9	3	0	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
Lar_restr_allev	PF14354.1	gi|118576604|ref|YP_876347.1|	-	5.7	7.3	10.1	1.1e+02	3.1	7.0	2.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Baculo_LEF5_C	PF11792.3	gi|118576604|ref|YP_876347.1|	-	6.8	6.1	11.4	0.8	9.1	1.5	3.4	3	1	1	4	4	4	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
TF_Zn_Ribbon	PF08271.7	gi|118576604|ref|YP_876347.1|	-	8.7	5.7	14.3	0.83	9.0	2.4	3.1	2	2	0	2	2	2	0	TFIIB	zinc-binding
PCNA_N	PF00705.13	gi|118576605|ref|YP_876348.1|	-	2.5e-20	72.2	0.1	9.8e-20	70.3	0.0	1.8	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|118576605|ref|YP_876348.1|	-	2.2e-19	69.6	0.9	2.2e-17	63.1	0.0	2.7	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|118576605|ref|YP_876348.1|	-	2.4e-11	42.9	0.0	1.2e-05	24.2	0.0	2.2	1	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|118576605|ref|YP_876348.1|	-	0.00033	19.8	0.0	0.00043	19.4	0.0	1.1	1	0	0	1	1	1	1	Rad9
Hus1	PF04005.7	gi|118576605|ref|YP_876348.1|	-	0.063	12.2	0.0	0.1	11.5	0.0	1.4	1	1	0	1	1	1	0	Hus1-like	protein
AA_kinase	PF00696.23	gi|118576606|ref|YP_876349.1|	-	7.6e-39	133.6	0.2	1e-38	133.2	0.1	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|118576606|ref|YP_876349.1|	-	4.4e-20	70.7	1.3	1.4e-09	37.2	0.0	2.9	3	0	0	3	3	3	2	ACT	domain
ACT_7	PF13840.1	gi|118576606|ref|YP_876349.1|	-	6.5e-18	64.0	0.8	6.1e-11	41.6	0.1	2.6	2	0	0	2	2	2	2	ACT	domain
LytR_C	PF13399.1	gi|118576606|ref|YP_876349.1|	-	0.02	15.2	0.0	1.3	9.4	0.0	2.6	1	1	1	2	2	2	0	LytR	cell	envelope-related	transcriptional	attenuator
DUF4164	PF13747.1	gi|118576606|ref|YP_876349.1|	-	0.027	14.5	0.4	0.1	12.7	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
N6_N4_Mtase	PF01555.13	gi|118576608|ref|YP_876351.1|	-	2.1e-24	86.3	0.0	7.9e-21	74.5	0.0	2.8	1	1	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|118576608|ref|YP_876351.1|	-	1.1e-07	31.8	0.0	0.0057	16.6	0.0	2.5	2	1	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|118576608|ref|YP_876351.1|	-	0.00014	21.4	0.0	0.087	12.3	0.0	2.3	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
Cons_hypoth95	PF03602.10	gi|118576608|ref|YP_876351.1|	-	0.0083	15.5	0.0	2.2	7.6	0.0	2.4	2	0	0	2	2	2	2	Conserved	hypothetical	protein	95
TP_methylase	PF00590.15	gi|118576610|ref|YP_876353.1|	-	1.3e-34	119.7	0.1	1.7e-34	119.4	0.1	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
GTP_EFTU_D4	PF14578.1	gi|118576610|ref|YP_876353.1|	-	0.073	12.7	0.3	0.21	11.2	0.0	1.8	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	4
tRNA-synt_1b	PF00579.20	gi|118576611|ref|YP_876354.1|	-	3.6e-38	131.3	0.0	4.6e-38	130.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
GP120	PF00516.13	gi|118576611|ref|YP_876354.1|	-	0.18	10.0	0.0	0.24	9.5	0.0	1.1	1	0	0	1	1	1	0	Envelope	glycoprotein	GP120
AsnC_trans_reg	PF01037.16	gi|118576612|ref|YP_876355.1|	-	1.2e-12	47.3	0.1	1.4e-12	47.1	0.0	1.0	1	0	0	1	1	1	1	AsnC	family
DUF457	PF04307.9	gi|118576613|ref|YP_876356.1|	-	1	8.6	4.0	0.44	9.8	0.8	2.0	2	1	0	2	2	2	0	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DegT_DnrJ_EryC1	PF01041.12	gi|118576614|ref|YP_876357.1|	-	9.7e-107	357.1	0.0	1.1e-106	356.9	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|118576614|ref|YP_876357.1|	-	2e-09	37.0	0.0	5.9e-09	35.4	0.0	1.7	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|118576614|ref|YP_876357.1|	-	7e-09	35.1	0.0	1.1e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|118576614|ref|YP_876357.1|	-	3.6e-06	25.9	0.0	5.1e-06	25.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|118576614|ref|YP_876357.1|	-	1.1e-05	23.9	0.0	1.7e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
PEP_mutase	PF13714.1	gi|118576614|ref|YP_876357.1|	-	0.0041	16.3	0.1	0.0068	15.6	0.1	1.3	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
OKR_DC_1	PF01276.15	gi|118576614|ref|YP_876357.1|	-	0.18	10.3	0.0	0.26	9.8	0.0	1.1	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
MtrA	PF04208.9	gi|118576615|ref|YP_876358.1|	-	1.9e-25	89.2	0.0	2.1e-25	89.1	0.0	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
dUTPase_2	PF08761.6	gi|118576616|ref|YP_876359.1|	-	1.7e-18	67.2	0.8	3.8e-11	43.3	0.1	2.0	1	1	1	2	2	2	2	dUTPase
PRA-PH	PF01503.12	gi|118576616|ref|YP_876359.1|	-	0.00012	22.2	0.0	0.00014	22.0	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
DUF550	PF04447.7	gi|118576616|ref|YP_876359.1|	-	0.0012	18.4	1.5	0.02	14.5	0.1	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF550)
PfkB	PF00294.19	gi|118576617|ref|YP_876360.1|	-	5.7e-23	81.4	0.1	1.5e-22	80.1	0.1	1.6	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|118576617|ref|YP_876360.1|	-	1.5e-05	24.3	0.0	2.3e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
NGF	PF00243.13	gi|118576617|ref|YP_876360.1|	-	0.061	13.0	0.1	0.09	12.5	0.1	1.2	1	0	0	1	1	1	0	Nerve	growth	factor	family
DUF1561	PF07598.6	gi|118576617|ref|YP_876360.1|	-	0.16	9.8	0.0	0.21	9.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1561)
LEA_2	PF03168.8	gi|118576618|ref|YP_876361.1|	-	0.0032	17.8	0.0	0.006	16.9	0.0	1.5	1	1	0	1	1	1	1	Late	embryogenesis	abundant	protein
DUF3795	PF12675.2	gi|118576619|ref|YP_876362.1|	-	0.71	10.0	12.3	1.1	9.5	8.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3795)
RNA_POL_M_15KD	PF02150.11	gi|118576619|ref|YP_876362.1|	-	6.3	6.5	9.1	0.88	9.3	1.5	2.7	2	2	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Pro_isomerase	PF00160.16	gi|118576621|ref|YP_876364.1|	-	1e-49	168.6	0.0	1.2e-49	168.5	0.0	1.0	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
HTH_23	PF13384.1	gi|118576622|ref|YP_876365.1|	-	0.0017	17.9	0.0	0.0048	16.4	0.0	1.8	1	1	0	1	1	1	1	Homeodomain-like	domain
GntR	PF00392.16	gi|118576622|ref|YP_876365.1|	-	0.063	12.7	0.3	0.47	9.9	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
MADF_DNA_bdg	PF10545.4	gi|118576622|ref|YP_876365.1|	-	0.087	13.0	0.0	0.11	12.6	0.0	1.4	1	1	0	1	1	1	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
OTCace_N	PF02729.16	gi|118576623|ref|YP_876366.1|	-	1.6e-39	134.8	0.0	2.4e-39	134.2	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|118576623|ref|YP_876366.1|	-	6.4e-32	110.6	0.0	1.1e-31	109.9	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PyrI	PF01948.13	gi|118576624|ref|YP_876367.1|	-	3e-35	120.1	0.1	7.6e-35	118.8	0.0	1.6	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|118576624|ref|YP_876367.1|	-	1.4e-15	56.4	0.5	2.3e-15	55.7	0.3	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
ATP-synt_C	PF00137.16	gi|118576625|ref|YP_876368.1|	-	2e-20	72.4	14.3	2e-20	72.4	9.9	1.6	2	0	0	2	2	2	1	ATP	synthase	subunit	C
ATP-synt_D	PF01813.12	gi|118576627|ref|YP_876370.1|	-	5.6e-35	120.6	0.4	6.2e-35	120.5	0.3	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF4356	PF14266.1	gi|118576627|ref|YP_876370.1|	-	0.0041	15.5	0.6	0.0044	15.5	0.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4356)
DUF1019	PF06254.6	gi|118576627|ref|YP_876370.1|	-	0.032	14.3	1.4	0.19	11.9	0.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1019)
ATP-synt_ab	PF00006.20	gi|118576628|ref|YP_876371.1|	-	1.5e-62	210.9	0.0	2e-62	210.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.18	gi|118576628|ref|YP_876371.1|	-	4.4e-11	42.8	2.7	1.3e-10	41.3	1.9	1.9	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
ATP-synt_ab_C	PF00306.22	gi|118576628|ref|YP_876371.1|	-	1.7e-09	38.1	0.0	3.4e-09	37.1	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
HAS-barrel	PF09378.5	gi|118576628|ref|YP_876371.1|	-	4.9e-05	23.1	0.9	0.00013	21.7	0.6	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
DUF561	PF04481.7	gi|118576628|ref|YP_876371.1|	-	0.011	14.6	0.0	0.019	13.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
ATP-synt_ab	PF00006.20	gi|118576629|ref|YP_876372.1|	-	1.3e-96	322.2	0.0	1.8e-96	321.8	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|118576629|ref|YP_876372.1|	-	6.2e-15	55.6	0.5	1.3e-14	54.6	0.4	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|118576629|ref|YP_876372.1|	-	1.6e-12	47.4	0.3	4.2e-12	46.1	0.2	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_19	PF13245.1	gi|118576629|ref|YP_876372.1|	-	0.00043	19.9	0.1	0.028	14.1	0.0	2.6	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|118576629|ref|YP_876372.1|	-	0.1	12.7	0.0	0.34	11.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
vATP-synt_E	PF01991.13	gi|118576630|ref|YP_876373.1|	-	1.5e-18	66.7	0.5	5e-18	65.1	0.4	1.7	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
ATP-synt_B	PF00430.13	gi|118576630|ref|YP_876373.1|	-	0.049	13.4	1.0	0.085	12.6	0.7	1.4	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
COX8	PF02285.10	gi|118576632|ref|YP_876375.1|	-	0.2	11.2	0.3	0.37	10.3	0.2	1.4	1	0	0	1	1	1	0	Cytochrome	oxidase	c	subunit	VIII
V_ATPase_I	PF01496.14	gi|118576634|ref|YP_876377.1|	-	1.4e-49	168.7	2.7	1.9e-48	164.9	1.8	2.2	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
TMF_TATA_bd	PF12325.3	gi|118576634|ref|YP_876377.1|	-	0.00092	18.9	0.7	0.15	11.8	0.2	2.4	2	0	0	2	2	2	2	TATA	element	modulatory	factor	1	TATA	binding
DUF2365	PF10157.4	gi|118576634|ref|YP_876377.1|	-	0.095	12.5	0.5	0.61	9.9	0.3	2.2	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2365)
TMF_DNA_bd	PF12329.3	gi|118576634|ref|YP_876377.1|	-	0.18	11.6	5.0	6.2	6.7	0.3	2.5	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Claudin_2	PF13903.1	gi|118576634|ref|YP_876377.1|	-	0.24	11.0	0.1	0.24	11.0	0.0	3.1	2	1	0	3	3	3	0	PMP-22/EMP/MP20/Claudin	tight	junction
Prefoldin_2	PF01920.15	gi|118576634|ref|YP_876377.1|	-	0.44	10.3	1.8	8.8	6.1	0.2	2.4	2	0	0	2	2	2	0	Prefoldin	subunit
DivIVA	PF05103.8	gi|118576634|ref|YP_876377.1|	-	0.55	10.2	2.8	1	9.3	0.1	2.1	2	0	0	2	2	2	0	DivIVA	protein
Rhodanese	PF00581.15	gi|118576635|ref|YP_876378.1|	-	2.3e-32	111.6	0.0	1.4e-16	60.8	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
Ammonium_transp	PF00909.16	gi|118576636|ref|YP_876379.1|	-	9e-108	360.2	31.6	9e-108	360.2	21.9	1.8	2	1	0	2	2	2	1	Ammonium	Transporter	Family
zinc_ribbon_5	PF13719.1	gi|118576638|ref|YP_876381.1|	-	0.0007	19.1	1.0	0.028	14.0	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|118576638|ref|YP_876381.1|	-	0.0019	17.8	0.8	0.11	12.2	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-HYPF	PF07503.7	gi|118576638|ref|YP_876381.1|	-	0.0038	16.6	2.6	0.029	13.7	1.8	2.0	1	1	0	1	1	1	1	HypF	finger
Prok-RING_1	PF14446.1	gi|118576638|ref|YP_876381.1|	-	0.0091	15.7	2.7	0.023	14.4	1.9	1.7	1	1	0	1	1	1	1	Prokaryotic	RING	finger	family	1
HypA	PF01155.14	gi|118576638|ref|YP_876381.1|	-	0.012	15.3	0.5	0.013	15.2	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
PhnA_Zn_Ribbon	PF08274.7	gi|118576638|ref|YP_876381.1|	-	0.012	15.3	2.3	0.26	11.0	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
DUF35_N	PF12172.3	gi|118576638|ref|YP_876381.1|	-	0.025	14.4	1.3	0.79	9.7	0.9	2.1	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C4_Topoisom	PF01396.14	gi|118576638|ref|YP_876381.1|	-	0.036	13.5	1.5	0.52	9.8	0.0	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-Sec23_Sec24	PF04810.10	gi|118576638|ref|YP_876381.1|	-	0.039	13.5	0.4	0.22	11.1	0.3	1.9	1	1	0	1	1	1	0	Sec23/Sec24	zinc	finger
zf-ribbon_3	PF13248.1	gi|118576638|ref|YP_876381.1|	-	0.04	13.1	0.6	4.2	6.7	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|118576638|ref|YP_876381.1|	-	0.062	13.6	2.6	0.4	11.0	1.8	1.9	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.6	gi|118576638|ref|YP_876381.1|	-	0.076	12.6	0.2	0.11	12.1	0.2	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|118576638|ref|YP_876381.1|	-	0.1	12.4	1.1	0.32	10.8	0.7	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.11	gi|118576638|ref|YP_876381.1|	-	0.1	12.2	0.9	0.21	11.3	0.6	1.5	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
TF_Zn_Ribbon	PF08271.7	gi|118576638|ref|YP_876381.1|	-	0.12	11.7	4.2	0.18	11.1	0.2	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
Zn_Tnp_IS1	PF03811.8	gi|118576638|ref|YP_876381.1|	-	0.12	11.8	0.8	0.33	10.5	0.0	1.8	2	0	0	2	2	2	0	InsA	N-terminal	domain
Zn-ribbon_8	PF09723.5	gi|118576638|ref|YP_876381.1|	-	0.14	12.0	3.3	0.39	10.7	2.3	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|118576638|ref|YP_876381.1|	-	0.19	11.7	1.6	0.29	11.1	1.1	1.3	1	0	0	1	1	1	0	zinc-finger
A2L_zn_ribbon	PF08792.5	gi|118576638|ref|YP_876381.1|	-	0.22	11.0	1.6	0.92	9.0	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF164	PF02591.10	gi|118576638|ref|YP_876381.1|	-	0.24	11.2	2.0	4.2	7.2	1.4	2.3	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
UPF0547	PF10571.4	gi|118576638|ref|YP_876381.1|	-	0.28	10.9	3.5	1.2	8.9	2.4	1.9	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
ADK_lid	PF05191.9	gi|118576638|ref|YP_876381.1|	-	0.32	10.7	3.5	0.54	9.9	0.0	2.5	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF1272	PF06906.6	gi|118576638|ref|YP_876381.1|	-	0.36	10.6	2.9	1	9.2	2.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
DNA_RNApol_7kD	PF03604.8	gi|118576638|ref|YP_876381.1|	-	2.8	7.4	6.4	12	5.4	3.6	2.4	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
vATP-synt_AC39	PF01992.11	gi|118576639|ref|YP_876382.1|	-	1.8e-28	99.6	0.1	2.1e-28	99.4	0.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
FCD	PF07729.7	gi|118576639|ref|YP_876382.1|	-	0.0025	18.1	0.8	0.51	10.6	0.0	2.9	3	0	0	3	3	3	2	FCD	domain
Pmp3	PF01679.12	gi|118576640|ref|YP_876383.1|	-	0.039	13.6	1.6	0.045	13.4	0.4	1.6	2	0	0	2	2	2	0	Proteolipid	membrane	potential	modulator
DUF202	PF02656.10	gi|118576640|ref|YP_876383.1|	-	0.43	10.8	4.4	0.5	10.6	3.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
Cas_Cas4	PF01930.12	gi|118576641|ref|YP_876384.1|	-	0.00053	19.9	0.0	0.00069	19.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|118576641|ref|YP_876384.1|	-	0.0063	15.9	0.7	0.089	12.1	0.5	2.1	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
HTH_45	PF14947.1	gi|118576642|ref|YP_876385.1|	-	1.5e-10	40.7	0.0	1.9e-10	40.4	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.2	gi|118576642|ref|YP_876385.1|	-	0.0014	18.2	0.1	0.0019	17.7	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|118576642|ref|YP_876385.1|	-	0.0016	18.7	0.1	0.0021	18.3	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|118576642|ref|YP_876385.1|	-	0.014	15.1	0.0	0.018	14.7	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.14	gi|118576642|ref|YP_876385.1|	-	0.015	14.9	0.0	0.021	14.5	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Mrr_N	PF14338.1	gi|118576642|ref|YP_876385.1|	-	0.091	12.8	0.0	0.11	12.6	0.0	1.4	1	1	0	1	1	1	0	Mrr	N-terminal	domain
Cdc6_C	PF09079.6	gi|118576642|ref|YP_876385.1|	-	0.11	12.2	0.0	0.28	10.9	0.0	1.6	1	1	1	2	2	2	0	CDC6,	C	terminal
RP-C	PF03428.8	gi|118576642|ref|YP_876385.1|	-	0.13	11.6	0.1	0.15	11.4	0.1	1.2	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
PIRT	PF15099.1	gi|118576643|ref|YP_876386.1|	-	0.0043	16.2	0.3	0.0043	16.2	0.2	2.3	1	1	2	3	3	3	1	Phosphoinositide-interacting	protein	family
UPF0233	PF06781.7	gi|118576643|ref|YP_876386.1|	-	0.35	10.5	4.7	0.12	11.9	1.0	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0233)
Adenylsucc_synt	PF00709.16	gi|118576646|ref|YP_876389.1|	-	2.1e-84	283.6	3.5	1.1e-40	139.6	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
OMPdecase	PF00215.19	gi|118576651|ref|YP_876394.1|	-	9.8e-33	113.4	0.0	1.1e-32	113.2	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
NUDIX	PF00293.23	gi|118576652|ref|YP_876395.1|	-	2.9e-14	52.8	0.2	3.6e-14	52.5	0.1	1.1	1	0	0	1	1	1	1	NUDIX	domain
Prenyltransf	PF01255.14	gi|118576653|ref|YP_876396.1|	-	2.6e-76	255.6	0.0	3.1e-76	255.4	0.0	1.1	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
DUF373	PF04123.8	gi|118576654|ref|YP_876397.1|	-	1.3e-108	363.0	8.3	1.5e-108	362.8	5.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
DUF4229	PF14012.1	gi|118576654|ref|YP_876397.1|	-	0.011	15.5	0.8	0.011	15.5	0.6	3.6	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF4229)
Cupredoxin_1	PF13473.1	gi|118576655|ref|YP_876398.1|	-	0.033	14.0	0.0	0.058	13.2	0.0	1.3	1	0	0	1	1	1	0	Cupredoxin-like	domain
Trypsin	PF00089.21	gi|118576657|ref|YP_876400.1|	-	0.00063	19.3	0.2	0.0017	17.9	0.2	1.6	1	1	0	1	1	1	1	Trypsin
Peptidase_S32	PF05579.8	gi|118576657|ref|YP_876400.1|	-	0.0071	15.3	0.1	0.012	14.6	0.1	1.3	1	0	0	1	1	1	1	Equine	arteritis	virus	serine	endopeptidase	S32
AsnC_trans_reg	PF01037.16	gi|118576659|ref|YP_876402.1|	-	0.046	13.4	0.0	0.076	12.7	0.0	1.3	1	0	0	1	1	1	0	AsnC	family
Copper-bind	PF00127.15	gi|118576660|ref|YP_876403.1|	-	0.032	14.4	0.0	0.047	13.9	0.0	1.3	1	0	0	1	1	1	0	Copper	binding	proteins,	plastocyanin/azurin	family
Peptidase_S32	PF05579.8	gi|118576662|ref|YP_876405.1|	-	0.033	13.1	0.7	0.054	12.4	0.5	1.3	1	0	0	1	1	1	0	Equine	arteritis	virus	serine	endopeptidase	S32
HypA	PF01155.14	gi|118576665|ref|YP_876408.1|	-	0.023	14.3	0.5	0.024	14.3	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|118576665|ref|YP_876408.1|	-	0.025	14.0	1.2	0.2	11.2	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
GFA	PF04828.9	gi|118576665|ref|YP_876408.1|	-	0.027	14.4	2.2	0.093	12.6	1.5	1.7	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
DNA_ligase_ZBD	PF03119.11	gi|118576665|ref|YP_876408.1|	-	0.034	13.8	0.8	0.058	13.1	0.1	1.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.2	gi|118576665|ref|YP_876408.1|	-	0.038	13.7	3.0	0.065	13.0	2.1	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
DNA_RNApol_7kD	PF03604.8	gi|118576665|ref|YP_876408.1|	-	0.041	13.3	2.4	2.6	7.5	0.1	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Auto_anti-p27	PF06677.7	gi|118576665|ref|YP_876408.1|	-	0.05	13.3	2.6	0.15	11.8	0.1	2.2	2	1	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Antiterm	PF03589.8	gi|118576665|ref|YP_876408.1|	-	0.11	12.6	0.4	0.12	12.4	0.3	1.1	1	0	0	1	1	1	0	Antitermination	protein
zf-ribbon_3	PF13248.1	gi|118576665|ref|YP_876408.1|	-	0.11	11.7	0.5	0.11	11.7	0.4	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|118576665|ref|YP_876408.1|	-	0.21	10.9	1.8	1	8.7	0.2	2.0	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-C4_Topoisom	PF01396.14	gi|118576665|ref|YP_876408.1|	-	0.22	11.0	2.6	0.31	10.5	0.1	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF2072	PF09845.4	gi|118576665|ref|YP_876408.1|	-	0.24	11.3	1.2	0.36	10.7	0.8	1.4	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
zf-ISL3	PF14690.1	gi|118576665|ref|YP_876408.1|	-	0.27	11.2	3.1	2.6	8.1	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-dskA_traR	PF01258.12	gi|118576665|ref|YP_876408.1|	-	0.28	10.9	3.1	4.1	7.2	0.1	2.1	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Zn-ribbon_8	PF09723.5	gi|118576665|ref|YP_876408.1|	-	0.29	11.1	3.5	3	7.8	2.4	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
ADK_lid	PF05191.9	gi|118576665|ref|YP_876408.1|	-	0.75	9.5	3.4	5.1	6.8	2.5	2.0	1	1	1	2	2	2	0	Adenylate	kinase,	active	site	lid
zinc_ribbon_4	PF13717.1	gi|118576665|ref|YP_876408.1|	-	1.8	8.2	6.1	9	6.0	4.2	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118576665|ref|YP_876408.1|	-	1.9	8.1	6.5	9.4	5.9	4.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF3263	PF11662.3	gi|118576666|ref|YP_876409.1|	-	0.067	12.6	0.0	0.083	12.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3263)
Aconitase	PF00330.15	gi|118576667|ref|YP_876410.1|	-	6.7e-69	232.5	1.3	8.7e-45	153.0	0.1	2.3	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|118576668|ref|YP_876411.1|	-	9e-22	77.5	0.1	8.3e-20	71.2	0.1	2.1	1	1	1	2	2	2	2	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|118576668|ref|YP_876411.1|	-	0.0059	16.0	0.0	0.025	13.9	0.0	1.9	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.15	gi|118576669|ref|YP_876412.1|	-	1.9e-159	531.0	0.0	2.1e-159	530.9	0.0	1.0	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|118576669|ref|YP_876412.1|	-	0.0056	15.2	0.0	0.0091	14.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Aconitase_C	PF00694.14	gi|118576670|ref|YP_876413.1|	-	2.5e-33	114.9	0.0	3.2e-33	114.6	0.0	1.1	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
NTP_transferase	PF00483.18	gi|118576671|ref|YP_876414.1|	-	1e-16	61.0	0.0	1.2e-16	60.7	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|118576671|ref|YP_876414.1|	-	1.5e-09	38.1	0.0	1.7e-09	37.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|118576671|ref|YP_876414.1|	-	0.0026	17.3	0.0	0.0037	16.8	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Ribosomal_S9	PF00380.14	gi|118576672|ref|YP_876415.1|	-	4.5e-34	117.2	1.5	5.4e-34	117.0	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.13	gi|118576673|ref|YP_876416.1|	-	2.7e-24	85.6	0.0	3.5e-24	85.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_L18e	PF00828.14	gi|118576674|ref|YP_876417.1|	-	2.1e-08	34.5	0.0	2.6e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
SGL	PF08450.7	gi|118576675|ref|YP_876418.1|	-	1.7e-27	96.3	8.2	0.0076	15.6	0.0	15.0	8	5	7	17	17	17	9	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|118576675|ref|YP_876418.1|	-	4.8e-21	75.2	7.8	3.7e-05	22.9	0.0	8.7	6	5	3	9	9	9	5	Lactonase,	7-bladed	beta-propeller
Str_synth	PF03088.11	gi|118576675|ref|YP_876418.1|	-	1.1e-08	35.0	0.0	17	5.5	0.0	9.3	11	0	0	11	11	11	1	Strictosidine	synthase
WD40	PF00400.27	gi|118576675|ref|YP_876418.1|	-	9.2e-06	25.3	3.9	2.5	8.0	0.0	9.4	11	1	1	12	12	12	1	WD	domain,	G-beta	repeat
Arylesterase	PF01731.15	gi|118576675|ref|YP_876418.1|	-	1.2e-05	25.2	0.0	36	4.4	0.0	8.1	10	0	0	10	10	10	0	Arylesterase
NHL	PF01436.16	gi|118576675|ref|YP_876418.1|	-	0.00033	20.4	15.4	40	4.4	0.0	11.3	13	0	0	13	13	13	0	NHL	repeat
Lactonase	PF10282.4	gi|118576677|ref|YP_876420.1|	-	1.4e-31	109.9	6.0	1.7e-05	24.1	0.0	8.9	5	3	2	7	7	7	6	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118576677|ref|YP_876420.1|	-	1.3e-22	80.4	14.8	0.0053	16.1	0.0	11.7	5	3	5	13	13	13	6	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|118576677|ref|YP_876420.1|	-	2.9e-08	33.5	0.0	84	3.2	0.0	10.8	14	0	0	14	14	14	0	Arylesterase
Str_synth	PF03088.11	gi|118576677|ref|YP_876420.1|	-	0.0003	20.7	0.0	2.7e+02	1.6	0.0	8.9	14	0	0	14	14	14	0	Strictosidine	synthase
PD40	PF07676.7	gi|118576677|ref|YP_876420.1|	-	0.00043	19.8	34.5	4.8	6.9	0.0	14.3	18	0	0	18	18	18	2	WD40-like	Beta	Propeller	Repeat
Glu_cyclase_2	PF05096.7	gi|118576677|ref|YP_876420.1|	-	0.009	15.0	0.0	98	1.8	0.0	6.4	7	0	0	7	7	7	0	Glutamine	cyclotransferase
DPPIV_N	PF00930.16	gi|118576677|ref|YP_876420.1|	-	0.71	8.3	0.0	9	4.7	0.0	2.7	3	0	0	3	3	3	0	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
NHL	PF01436.16	gi|118576677|ref|YP_876420.1|	-	2.5	8.2	28.7	58	3.9	0.0	13.3	17	0	0	17	17	17	0	NHL	repeat
DUF552	PF04472.7	gi|118576678|ref|YP_876421.1|	-	8.6e-15	54.4	0.1	1e-14	54.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF552)
ThiI	PF02568.9	gi|118576679|ref|YP_876422.1|	-	4.1e-13	49.2	0.0	6.1e-13	48.6	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|118576679|ref|YP_876422.1|	-	2.3e-08	32.9	0.0	3.5e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
DUF814	PF05670.8	gi|118576679|ref|YP_876422.1|	-	3e-05	23.8	0.0	7.5e-05	22.5	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF814)
Asn_synthase	PF00733.16	gi|118576679|ref|YP_876422.1|	-	0.00028	20.4	0.0	0.00041	19.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|118576679|ref|YP_876422.1|	-	0.0041	16.4	0.1	0.0076	15.5	0.1	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
DUF374	PF04028.8	gi|118576679|ref|YP_876422.1|	-	0.0069	15.5	0.4	3.6	6.8	0.0	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF374)
NAD_synthase	PF02540.12	gi|118576679|ref|YP_876422.1|	-	0.17	10.7	0.0	0.26	10.1	0.0	1.3	1	0	0	1	1	1	0	NAD	synthase
ATP_bind_4	PF01902.12	gi|118576679|ref|YP_876422.1|	-	0.18	11.1	0.0	0.6	9.4	0.0	1.7	2	0	0	2	2	2	0	ATP-binding	region
Peptidase_M24	PF00557.19	gi|118576680|ref|YP_876423.1|	-	5.9e-58	195.8	0.0	8.9e-58	195.2	0.0	1.3	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|118576680|ref|YP_876423.1|	-	9.5e-08	32.6	0.0	1.5e-07	31.9	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Methyltransf_31	PF13847.1	gi|118576681|ref|YP_876424.1|	-	8.6e-17	61.1	0.0	1.1e-16	60.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|118576681|ref|YP_876424.1|	-	4e-16	58.8	0.0	2.6e-15	56.1	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|118576681|ref|YP_876424.1|	-	1.4e-15	57.8	0.3	2.1e-15	57.2	0.2	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|118576681|ref|YP_876424.1|	-	4.1e-15	56.0	0.0	8.6e-15	55.0	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118576681|ref|YP_876424.1|	-	1.1e-14	54.4	0.0	1.8e-14	53.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|118576681|ref|YP_876424.1|	-	1.1e-11	44.9	0.0	1.9e-11	44.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118576681|ref|YP_876424.1|	-	1.9e-11	44.3	0.0	3e-11	43.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118576681|ref|YP_876424.1|	-	8.8e-11	41.8	1.9	1.8e-10	40.8	1.3	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|118576681|ref|YP_876424.1|	-	4.5e-06	26.3	0.1	6.3e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|118576681|ref|YP_876424.1|	-	2.1e-05	23.9	0.2	5.2e-05	22.6	0.2	1.6	1	1	0	1	1	1	1	Methyltransferase	small	domain
CMAS	PF02353.15	gi|118576681|ref|YP_876424.1|	-	0.0013	17.9	0.1	0.0022	17.1	0.1	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
PrmA	PF06325.8	gi|118576681|ref|YP_876424.1|	-	0.0063	15.6	0.4	0.0088	15.1	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
UPF0020	PF01170.13	gi|118576681|ref|YP_876424.1|	-	0.062	12.8	0.1	0.094	12.2	0.1	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
DFP	PF04127.10	gi|118576682|ref|YP_876425.1|	-	3.5e-52	176.7	0.3	8.5e-50	168.9	0.1	2.1	2	0	0	2	2	2	2	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|118576682|ref|YP_876425.1|	-	3.5e-22	78.4	0.1	7.1e-22	77.4	0.0	1.5	1	0	0	1	1	1	1	Flavoprotein
Glyco_trans_4_4	PF13579.1	gi|118576682|ref|YP_876425.1|	-	0.037	14.1	3.0	3.5	7.7	0.3	3.0	2	1	0	2	2	2	0	Glycosyl	transferase	4-like	domain
NAD_binding_10	PF13460.1	gi|118576682|ref|YP_876425.1|	-	0.09	12.7	0.8	0.51	10.3	0.2	2.4	3	0	0	3	3	3	0	NADH(P)-binding
Pantoate_transf	PF02548.10	gi|118576683|ref|YP_876426.1|	-	2.5e-100	334.9	1.6	2.8e-100	334.7	1.1	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
DUF137	PF02006.11	gi|118576684|ref|YP_876427.1|	-	3.5e-67	225.2	0.2	4.4e-67	224.9	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
TPP_enzyme_M	PF00205.17	gi|118576684|ref|YP_876427.1|	-	4.9e-05	23.1	0.4	8e-05	22.4	0.3	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
GHMP_kinases_N	PF00288.21	gi|118576685|ref|YP_876428.1|	-	2.2e-08	34.0	2.8	4.7e-08	32.9	0.8	2.3	2	1	0	2	2	2	1	GHMP	kinases	N	terminal	domain
PhoU	PF01895.14	gi|118576686|ref|YP_876429.1|	-	1.9e-14	53.8	0.9	2.2e-11	44.0	0.0	2.8	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|118576686|ref|YP_876429.1|	-	5.8e-07	29.0	0.3	1.4e-06	27.8	0.2	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF2080	PF09853.4	gi|118576686|ref|YP_876429.1|	-	0.0032	17.1	0.0	0.56	9.9	0.0	2.4	2	0	0	2	2	2	2	Putative	transposon-encoded	protein	(DUF2080)
HTH_AsnC-type	PF13404.1	gi|118576687|ref|YP_876430.1|	-	2.6e-20	71.6	3.9	2e-09	36.8	0.1	2.9	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|118576687|ref|YP_876430.1|	-	1.1e-17	63.0	0.5	2.7e-09	36.2	0.0	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|118576687|ref|YP_876430.1|	-	1.4e-09	37.5	0.7	0.00059	19.4	0.1	2.6	2	1	0	2	2	2	2	MarR	family
TrmB	PF01978.14	gi|118576687|ref|YP_876430.1|	-	2.1e-08	33.7	0.0	0.006	16.2	0.0	2.3	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|118576687|ref|YP_876430.1|	-	1.8e-05	24.9	0.1	0.32	11.3	0.0	2.6	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
HTH_23	PF13384.1	gi|118576687|ref|YP_876430.1|	-	7e-05	22.3	0.2	0.17	11.5	0.0	2.5	2	0	0	2	2	2	2	Homeodomain-like	domain
LacI	PF00356.16	gi|118576687|ref|YP_876430.1|	-	0.00097	18.7	0.1	0.0021	17.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	lacI	family
HTH_5	PF01022.15	gi|118576687|ref|YP_876430.1|	-	0.005	16.4	0.0	0.96	9.1	0.0	3.2	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.1	gi|118576687|ref|YP_876430.1|	-	0.0056	16.4	0.1	1.5	8.6	0.0	2.7	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|118576687|ref|YP_876430.1|	-	0.0063	16.2	0.1	0.81	9.5	0.0	2.5	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|118576687|ref|YP_876430.1|	-	0.0069	16.0	0.2	1.4	8.5	0.0	2.4	2	0	0	2	2	2	1	HTH	domain
RepL	PF05732.6	gi|118576687|ref|YP_876430.1|	-	0.049	12.8	0.0	0.58	9.3	0.0	2.0	2	0	0	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
LexA_DNA_bind	PF01726.11	gi|118576687|ref|YP_876430.1|	-	0.051	13.1	0.7	3.5	7.2	0.1	3.1	3	0	0	3	3	3	0	LexA	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|118576687|ref|YP_876430.1|	-	0.062	12.6	2.8	0.13	11.5	0.0	2.7	3	0	0	3	3	3	0	Sigma-70,	region	4
MarR	PF01047.17	gi|118576687|ref|YP_876430.1|	-	0.063	13.0	0.1	7.5	6.3	0.0	2.4	2	0	0	2	2	2	0	MarR	family
Fe_dep_repress	PF01325.14	gi|118576687|ref|YP_876430.1|	-	0.11	12.4	0.1	8.3	6.4	0.0	2.4	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Mga	PF05043.8	gi|118576687|ref|YP_876430.1|	-	0.12	12.6	0.0	0.99	9.7	0.0	2.1	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|118576687|ref|YP_876430.1|	-	0.13	11.7	0.1	3.5	7.1	0.0	2.4	3	0	0	3	3	3	0	TFIIE	alpha	subunit
MacB_PCD	PF12704.2	gi|118576688|ref|YP_876431.1|	-	4.6e-19	68.9	3.3	4.6e-19	68.9	2.3	1.6	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.16	gi|118576688|ref|YP_876431.1|	-	1.2e-18	66.9	5.4	1.2e-18	66.9	3.7	1.7	2	0	0	2	2	2	1	FtsX-like	permease	family
ABC_tran	PF00005.22	gi|118576689|ref|YP_876432.1|	-	1e-31	110.0	0.0	1.3e-31	109.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|118576689|ref|YP_876432.1|	-	8.3e-08	32.5	0.0	5.9e-06	26.4	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|118576689|ref|YP_876432.1|	-	5.6e-07	29.0	0.0	9.9e-07	28.2	0.0	1.3	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|118576689|ref|YP_876432.1|	-	2.6e-05	23.6	0.1	4.7e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|118576689|ref|YP_876432.1|	-	0.0004	20.4	0.2	0.00056	19.9	0.2	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|118576689|ref|YP_876432.1|	-	0.00053	19.5	0.3	0.0023	17.4	0.1	1.9	2	0	0	2	2	2	1	AAA-like	domain
DUF258	PF03193.11	gi|118576689|ref|YP_876432.1|	-	0.0006	19.0	0.1	0.00086	18.5	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AviRa	PF11599.3	gi|118576689|ref|YP_876432.1|	-	0.0018	17.3	0.1	0.031	13.2	0.0	2.0	2	0	0	2	2	2	1	RRNA	methyltransferase	AviRa
AAA_22	PF13401.1	gi|118576689|ref|YP_876432.1|	-	0.0023	18.0	0.2	0.022	14.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|118576689|ref|YP_876432.1|	-	0.0038	16.6	2.0	0.032	13.6	0.2	2.4	2	2	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|118576689|ref|YP_876432.1|	-	0.0051	16.2	0.0	0.0083	15.5	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|118576689|ref|YP_876432.1|	-	0.0051	15.7	0.1	0.0074	15.2	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|118576689|ref|YP_876432.1|	-	0.0056	16.1	0.0	0.0095	15.4	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_15	PF13175.1	gi|118576689|ref|YP_876432.1|	-	0.0059	15.7	0.0	1.5	7.8	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|118576689|ref|YP_876432.1|	-	0.0082	16.0	0.5	0.01	15.7	0.3	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|118576689|ref|YP_876432.1|	-	0.0093	16.3	0.1	0.012	15.9	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|118576689|ref|YP_876432.1|	-	0.014	15.0	1.4	0.045	13.4	0.3	2.4	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|118576689|ref|YP_876432.1|	-	0.015	14.8	0.4	0.057	12.9	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
G-alpha	PF00503.15	gi|118576689|ref|YP_876432.1|	-	0.021	13.5	0.0	0.023	13.3	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
NACHT	PF05729.7	gi|118576689|ref|YP_876432.1|	-	0.024	14.3	0.3	0.075	12.6	0.2	1.8	1	1	1	2	2	2	0	NACHT	domain
AAA_17	PF13207.1	gi|118576689|ref|YP_876432.1|	-	0.024	15.4	0.5	0.061	14.1	0.3	1.6	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|118576689|ref|YP_876432.1|	-	0.036	13.1	0.0	0.058	12.4	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
ABC_ATPase	PF09818.4	gi|118576689|ref|YP_876432.1|	-	0.043	12.3	1.4	1.1	7.8	0.0	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
KaiC	PF06745.8	gi|118576689|ref|YP_876432.1|	-	0.049	12.7	0.0	2.4	7.2	0.0	2.2	2	0	0	2	2	2	0	KaiC
MMR_HSR1	PF01926.18	gi|118576689|ref|YP_876432.1|	-	0.056	13.3	0.8	0.12	12.3	0.4	1.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Dynamin_N	PF00350.18	gi|118576689|ref|YP_876432.1|	-	0.057	13.2	0.2	0.11	12.2	0.1	1.5	1	0	0	1	1	1	0	Dynamin	family
Lig_chan-Glu_bd	PF10613.4	gi|118576689|ref|YP_876432.1|	-	0.071	13.0	0.0	0.17	11.9	0.0	1.6	1	0	0	1	1	1	0	Ligated	ion	channel	L-glutamate-	and	glycine-binding	site
Miro	PF08477.8	gi|118576689|ref|YP_876432.1|	-	0.094	13.2	0.0	0.19	12.2	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
cobW	PF02492.14	gi|118576689|ref|YP_876432.1|	-	0.096	12.1	0.3	0.22	10.9	0.1	1.7	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
NPCBM_assoc	PF10633.4	gi|118576690|ref|YP_876433.1|	-	3.3e-05	23.8	0.0	0.035	14.1	0.0	3.6	3	1	0	3	3	3	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
EPSP_synthase	PF00275.15	gi|118576690|ref|YP_876433.1|	-	0.0088	14.5	0.0	0.012	14.0	0.0	1.2	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
ABC1	PF03109.11	gi|118576692|ref|YP_876435.1|	-	2.4e-25	88.8	0.0	1.6e-24	86.1	0.0	2.1	2	0	0	2	2	2	1	ABC1	family
APH	PF01636.18	gi|118576692|ref|YP_876435.1|	-	0.0098	15.6	0.1	0.29	10.8	0.1	2.5	1	1	0	1	1	1	1	Phosphotransferase	enzyme	family
Dala_Dala_lig_N	PF01820.16	gi|118576692|ref|YP_876435.1|	-	0.11	12.8	0.0	0.29	11.4	0.0	1.7	1	0	0	1	1	1	0	D-ala	D-ala	ligase	N-terminus
NAAA-beta	PF15508.1	gi|118576692|ref|YP_876435.1|	-	0.34	11.2	1.9	94	3.4	0.0	3.9	4	0	0	4	4	4	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
HSP20	PF00011.16	gi|118576693|ref|YP_876436.1|	-	3.7e-08	33.1	0.0	5.1e-08	32.6	0.0	1.3	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
DDE_Tnp_IS240	PF13610.1	gi|118576695|ref|YP_876438.1|	-	4.5e-07	29.9	5.4	1.2e-05	25.2	0.1	2.8	3	0	0	3	3	3	2	DDE	domain
Rod_C	PF10493.4	gi|118576695|ref|YP_876438.1|	-	0.051	11.8	0.2	0.075	11.3	0.2	1.1	1	0	0	1	1	1	0	Rough	deal	protein	C-terminal	region
PLDc_2	PF13091.1	gi|118576696|ref|YP_876439.1|	-	1.2e-16	60.6	0.0	3.9e-16	58.9	0.0	2.0	1	0	0	1	1	1	1	PLD-like	domain
Helicase_C	PF00271.26	gi|118576696|ref|YP_876439.1|	-	1.7e-13	50.2	0.0	5.4e-13	48.6	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|118576696|ref|YP_876439.1|	-	3.2e-11	42.5	0.1	3.2e-07	29.4	0.0	2.4	2	0	0	2	2	2	2	SNF2	family	N-terminal	domain
DEAD	PF00270.24	gi|118576696|ref|YP_876439.1|	-	2e-08	33.9	0.5	0.0006	19.3	0.0	3.0	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
PLDc	PF00614.17	gi|118576696|ref|YP_876439.1|	-	0.055	13.3	0.1	0.14	12.0	0.1	1.7	1	0	0	1	1	1	0	Phospholipase	D	Active	site	motif
Methyltransf_26	PF13659.1	gi|118576697|ref|YP_876440.1|	-	2.8e-09	37.0	0.0	2.2e-08	34.1	0.0	2.3	1	1	0	1	1	1	1	Methyltransferase	domain
Eco57I	PF07669.6	gi|118576697|ref|YP_876440.1|	-	2.5e-06	27.8	6.5	0.00026	21.2	0.0	3.7	5	0	0	5	5	5	2	Eco57I	restriction-modification	methylase
TaqI_C	PF12950.2	gi|118576697|ref|YP_876440.1|	-	0.0043	16.7	0.3	0.022	14.4	0.2	2.3	1	0	0	1	1	1	1	TaqI-like	C-terminal	specificity	domain
UPF0020	PF01170.13	gi|118576697|ref|YP_876440.1|	-	0.0085	15.6	0.0	0.26	10.8	0.0	2.6	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Prefoldin_2	PF01920.15	gi|118576699|ref|YP_876442.1|	-	0.042	13.6	1.3	0.052	13.3	0.9	1.1	1	0	0	1	1	1	0	Prefoldin	subunit
CCDC-167	PF15188.1	gi|118576699|ref|YP_876442.1|	-	0.056	13.3	1.5	0.056	13.3	1.0	1.4	2	0	0	2	2	2	0	Coiled-coil	domain-containing	protein	167
Atg14	PF10186.4	gi|118576699|ref|YP_876442.1|	-	0.059	12.3	0.6	0.059	12.3	0.4	1.1	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Sugarporin_N	PF11471.3	gi|118576699|ref|YP_876442.1|	-	0.077	12.6	0.3	0.09	12.4	0.2	1.1	1	0	0	1	1	1	0	Maltoporin	periplasmic	N-terminal	extension
TPPK_C	PF12555.3	gi|118576701|ref|YP_876444.1|	-	0.16	11.7	1.5	0.37	10.5	1.0	1.6	1	0	0	1	1	1	0	Thiamine	pyrophosphokinase	C	terminal
TPPK_C	PF12555.3	gi|118576703|ref|YP_876446.1|	-	1.3	8.8	4.8	0.41	10.3	0.9	1.9	2	0	0	2	2	2	0	Thiamine	pyrophosphokinase	C	terminal
Ecotin	PF03974.8	gi|118576705|ref|YP_876448.1|	-	0.065	12.9	0.0	0.073	12.7	0.0	1.1	1	0	0	1	1	1	0	Ecotin
DDE_Tnp_IS240	PF13610.1	gi|118576706|ref|YP_876449.1|	-	5e-18	65.4	0.0	8.6e-18	64.6	0.0	1.4	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|118576706|ref|YP_876449.1|	-	3.4e-07	29.7	0.1	4.5e-07	29.3	0.1	1.1	1	0	0	1	1	1	1	Transposase	IS66	family
rve_3	PF13683.1	gi|118576706|ref|YP_876449.1|	-	1.7e-06	27.4	0.1	5.6e-06	25.7	0.0	1.8	2	0	0	2	2	2	1	Integrase	core	domain
Zn_Tnp_IS1595	PF12760.2	gi|118576706|ref|YP_876449.1|	-	0.00071	19.3	2.0	0.00071	19.3	1.4	2.5	2	1	0	2	2	1	1	Transposase	zinc-ribbon	domain
Transposase_mut	PF00872.13	gi|118576706|ref|YP_876449.1|	-	0.00097	17.7	0.1	0.04	12.4	0.0	2.1	2	0	0	2	2	2	1	Transposase,	Mutator	family
HTH_psq	PF05225.11	gi|118576706|ref|YP_876449.1|	-	0.023	14.2	0.1	0.047	13.2	0.1	1.5	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_Tnp_1	PF01527.15	gi|118576706|ref|YP_876449.1|	-	0.07	13.1	0.0	0.2	11.6	0.0	1.8	1	0	0	1	1	1	0	Transposase
zf-CSL	PF05207.8	gi|118576706|ref|YP_876449.1|	-	0.12	11.9	8.0	0.063	12.8	2.4	2.5	2	1	0	2	2	2	0	CSL	zinc	finger
DUF2387	PF09526.5	gi|118576706|ref|YP_876449.1|	-	0.17	11.8	0.2	0.17	11.8	0.1	2.4	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Zn_ribbon_recom	PF13408.1	gi|118576706|ref|YP_876449.1|	-	0.39	11.0	12.1	2.8	8.2	1.6	2.5	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Elf1	PF05129.8	gi|118576706|ref|YP_876449.1|	-	1.7	8.4	6.2	0.16	11.7	0.7	1.9	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-C4_Topoisom	PF01396.14	gi|118576706|ref|YP_876449.1|	-	8.9	5.9	10.6	0.52	9.8	1.6	2.4	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Anillin	PF08174.6	gi|118576709|ref|YP_876452.1|	-	0.13	12.3	0.0	0.21	11.6	0.0	1.3	1	0	0	1	1	1	0	Cell	division	protein	anillin
DUF1474	PF07342.6	gi|118576709|ref|YP_876452.1|	-	0.19	11.9	2.6	0.27	11.4	1.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1474)
Peptidase_S3	PF00944.14	gi|118576710|ref|YP_876453.1|	-	0.051	12.9	0.5	0.13	11.6	0.1	1.7	1	1	1	2	2	2	0	Alphavirus	core	protein
Thymidylate_kin	PF02223.12	gi|118576712|ref|YP_876455.1|	-	3e-23	82.1	0.0	3.6e-23	81.9	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
HD	PF01966.17	gi|118576713|ref|YP_876456.1|	-	7.6e-14	51.7	0.0	1.3e-13	50.9	0.0	1.4	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|118576713|ref|YP_876456.1|	-	0.12	11.6	0.0	0.22	10.7	0.0	1.4	1	0	0	1	1	1	0	HDOD	domain
AA_kinase	PF00696.23	gi|118576714|ref|YP_876457.1|	-	1.1e-30	106.9	0.4	1.3e-30	106.6	0.3	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
Proho_convert	PF12177.3	gi|118576714|ref|YP_876457.1|	-	0.12	12.0	0.7	0.2	11.2	0.1	1.6	2	0	0	2	2	2	0	Prohormone	convertase	enzyme
LEA_2	PF03168.8	gi|118576716|ref|YP_876459.1|	-	0.016	15.5	0.0	0.026	14.8	0.0	1.5	1	1	0	1	1	1	0	Late	embryogenesis	abundant	protein
Ribosomal_L37ae	PF01780.14	gi|118576717|ref|YP_876460.1|	-	1.3e-18	66.6	3.7	1.4e-18	66.5	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|118576717|ref|YP_876460.1|	-	5.9e-05	22.7	2.7	8.4e-05	22.2	1.9	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|118576717|ref|YP_876460.1|	-	0.0041	16.7	1.8	0.0062	16.1	1.2	1.6	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
RRN7	PF11781.3	gi|118576717|ref|YP_876460.1|	-	0.0072	15.7	0.8	0.011	15.2	0.5	1.3	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Zn-ribbon_8	PF09723.5	gi|118576717|ref|YP_876460.1|	-	0.012	15.5	1.5	0.23	11.4	0.0	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|118576717|ref|YP_876460.1|	-	0.029	13.5	2.2	1.2	8.4	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
C1_1	PF00130.17	gi|118576717|ref|YP_876460.1|	-	0.064	12.9	1.2	0.091	12.5	0.8	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DZR	PF12773.2	gi|118576717|ref|YP_876460.1|	-	0.081	12.7	1.3	0.19	11.5	0.9	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ISL3	PF14690.1	gi|118576717|ref|YP_876460.1|	-	0.11	12.5	1.8	3.2	7.8	0.2	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RNA_POL_M_15KD	PF02150.11	gi|118576717|ref|YP_876460.1|	-	0.14	11.8	2.1	1.1	9.0	1.4	2.0	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
NOB1_Zn_bind	PF08772.6	gi|118576717|ref|YP_876460.1|	-	0.15	11.9	1.7	0.43	10.4	0.9	2.0	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Rubredoxin	PF00301.15	gi|118576717|ref|YP_876460.1|	-	0.15	11.9	1.4	13	5.7	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
DNA_RNApol_7kD	PF03604.8	gi|118576717|ref|YP_876460.1|	-	0.17	11.3	2.1	2.5	7.6	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1451	PF07295.6	gi|118576717|ref|YP_876460.1|	-	0.28	10.9	1.9	1.1	8.9	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1451)
TF_Zn_Ribbon	PF08271.7	gi|118576717|ref|YP_876460.1|	-	0.33	10.3	1.8	0.79	9.0	0.1	2.0	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|118576717|ref|YP_876460.1|	-	0.36	10.3	6.0	6.2	6.4	0.3	2.3	1	1	2	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|118576717|ref|YP_876460.1|	-	1.7	8.4	6.4	20	4.9	4.4	2.1	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Prim_Zn_Ribbon	PF08273.7	gi|118576717|ref|YP_876460.1|	-	1.8	8.7	8.7	16	5.6	6.0	2.0	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-tcix	PF14952.1	gi|118576717|ref|YP_876460.1|	-	1.8	7.9	7.1	4.2	6.7	0.9	2.4	1	1	1	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
RNase_PH	PF01138.16	gi|118576718|ref|YP_876461.1|	-	1.9e-22	80.0	0.0	3.4e-22	79.1	0.0	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|118576718|ref|YP_876461.1|	-	5e-14	51.9	0.4	1.1e-13	50.8	0.0	1.8	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|118576719|ref|YP_876462.1|	-	3.8e-35	121.0	0.0	5.1e-35	120.6	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|118576719|ref|YP_876462.1|	-	5.2e-13	48.7	0.3	1e-12	47.7	0.2	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.24	gi|118576720|ref|YP_876463.1|	-	1.8e-11	43.5	0.5	3.3e-11	42.6	0.4	1.4	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|118576720|ref|YP_876463.1|	-	5.9e-06	25.8	0.1	1.4e-05	24.6	0.1	1.6	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.12	gi|118576720|ref|YP_876463.1|	-	6.4e-05	22.4	0.2	0.00016	21.1	0.1	1.6	1	0	0	1	1	1	1	KH	domain
ECR1_N	PF14382.1	gi|118576720|ref|YP_876463.1|	-	0.0069	15.6	0.1	0.015	14.6	0.0	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.18	gi|118576720|ref|YP_876463.1|	-	0.014	15.5	0.1	0.11	12.6	0.0	2.5	3	1	0	3	3	3	0	S1	RNA	binding	domain
KH_4	PF13083.1	gi|118576720|ref|YP_876463.1|	-	0.015	14.9	0.2	0.052	13.1	0.1	2.0	1	1	0	1	1	1	0	KH	domain
SBDS	PF01172.13	gi|118576721|ref|YP_876464.1|	-	5.1e-25	87.0	0.0	8.6e-25	86.3	0.0	1.4	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|118576721|ref|YP_876464.1|	-	2e-19	69.5	0.0	2.9e-19	68.9	0.0	1.2	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|118576721|ref|YP_876464.1|	-	0.065	13.1	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
EGF_2	PF07974.8	gi|118576724|ref|YP_876467.1|	-	2.2	8.4	7.2	18	5.6	5.0	2.3	1	1	0	1	1	1	0	EGF-like	domain
UPF0180	PF03698.8	gi|118576726|ref|YP_876469.1|	-	2	8.3	5.0	7.6	6.4	0.3	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
RNA_pol_A_bac	PF01000.21	gi|118576727|ref|YP_876470.1|	-	8.7e-25	87.0	0.0	1.4e-24	86.4	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|118576727|ref|YP_876470.1|	-	5.8e-11	41.3	0.0	7.4e-11	41.0	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Beta-Casp	PF10996.3	gi|118576728|ref|YP_876471.1|	-	1.7e-31	108.8	0.0	2.9e-31	108.0	0.0	1.4	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|118576728|ref|YP_876471.1|	-	3.3e-20	72.5	0.2	7.1e-20	71.4	0.1	1.6	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|118576728|ref|YP_876471.1|	-	1.4e-12	47.2	0.0	4.3e-12	45.6	0.0	1.9	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|118576728|ref|YP_876471.1|	-	1.3e-10	41.1	0.0	2.4e-10	40.3	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|118576728|ref|YP_876471.1|	-	0.074	12.7	0.1	0.17	11.5	0.0	1.7	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Proteasome	PF00227.21	gi|118576729|ref|YP_876472.1|	-	1e-47	161.9	0.1	1.1e-47	161.7	0.1	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Fe-ADH_2	PF13685.1	gi|118576730|ref|YP_876473.1|	-	3.6e-67	226.2	0.1	4.5e-67	225.9	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|118576730|ref|YP_876473.1|	-	1.4e-23	83.1	1.4	2.9e-23	82.1	1.0	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|118576730|ref|YP_876473.1|	-	0.00014	20.8	3.8	0.0006	18.8	0.5	2.9	2	1	0	2	2	2	1	3-dehydroquinate	synthase
FKBP_C	PF00254.23	gi|118576731|ref|YP_876474.1|	-	0.00029	20.8	0.0	0.00067	19.6	0.0	1.6	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Aminotran_5	PF00266.14	gi|118576732|ref|YP_876475.1|	-	1.5e-34	119.3	0.0	1.9e-34	119.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|118576732|ref|YP_876475.1|	-	2.1e-05	23.8	0.0	0.00014	21.0	0.0	2.0	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|118576732|ref|YP_876475.1|	-	9.7e-05	20.8	0.0	0.00016	20.1	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
CTP_transf_2	PF01467.21	gi|118576734|ref|YP_876477.1|	-	3.9e-05	23.7	0.0	3.9e-05	23.7	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase
DUF543	PF04418.7	gi|118576734|ref|YP_876477.1|	-	0.11	12.5	0.3	0.13	12.2	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF543)
RTC	PF01137.16	gi|118576735|ref|YP_876478.1|	-	1.8e-69	232.9	0.0	2.1e-69	232.8	0.0	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
CopD	PF05425.8	gi|118576736|ref|YP_876479.1|	-	3e-11	43.4	4.6	3e-11	43.4	3.2	1.8	2	0	0	2	2	2	1	Copper	resistance	protein	D
DUF2269	PF10027.4	gi|118576736|ref|YP_876479.1|	-	0.0032	17.2	6.3	0.005	16.6	4.3	1.3	1	1	0	1	1	1	1	Predicted	integral	membrane	protein	(DUF2269)
DUF4149	PF13664.1	gi|118576736|ref|YP_876479.1|	-	0.036	14.1	6.0	0.023	14.7	2.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4149)
DUF989	PF06181.6	gi|118576736|ref|YP_876479.1|	-	0.079	12.0	0.1	0.079	12.0	0.1	1.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF989)
UPF0093	PF03653.8	gi|118576736|ref|YP_876479.1|	-	0.11	12.4	4.1	0.19	11.6	2.9	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0093)
DUF2407_C	PF13373.1	gi|118576736|ref|YP_876479.1|	-	0.52	10.2	1.9	1.1	9.1	0.3	2.0	2	0	0	2	2	2	0	DUF2407	C-terminal	domain
LEA_2	PF03168.8	gi|118576737|ref|YP_876480.1|	-	0.00086	19.6	0.0	0.0013	19.0	0.0	1.3	1	0	0	1	1	1	1	Late	embryogenesis	abundant	protein
Usher	PF00577.15	gi|118576737|ref|YP_876480.1|	-	0.1	11.3	0.0	0.12	11.0	0.0	1.0	1	0	0	1	1	1	0	Outer	membrane	usher	protein
Nitroreductase	PF00881.19	gi|118576738|ref|YP_876481.1|	-	6.1e-26	91.1	0.0	9.1e-26	90.6	0.0	1.3	1	0	0	1	1	1	1	Nitroreductase	family
FMN_red	PF03358.10	gi|118576739|ref|YP_876482.1|	-	4.4e-24	84.7	0.0	5.3e-24	84.4	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|118576739|ref|YP_876482.1|	-	4.9e-09	35.9	0.0	6.5e-09	35.5	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin-like	fold
DUF3800	PF12686.2	gi|118576741|ref|YP_876484.1|	-	3e-24	85.9	0.1	3.6e-24	85.6	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3800)
Peptidase_C1_2	PF03051.10	gi|118576741|ref|YP_876484.1|	-	0.029	12.9	0.0	0.041	12.4	0.0	1.2	1	0	0	1	1	1	0	Peptidase	C1-like	family
NTS	PF15447.1	gi|118576741|ref|YP_876484.1|	-	0.15	12.4	0.2	0.48	10.8	0.1	1.8	1	0	0	1	1	1	0	N-terminal	segments	of	PfEMP1
HTH_Tnp_4	PF13613.1	gi|118576743|ref|YP_876486.1|	-	0.0095	15.4	0.0	0.016	14.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
KRBA1	PF15287.1	gi|118576743|ref|YP_876486.1|	-	0.081	12.2	0.0	0.19	11.1	0.0	1.5	1	0	0	1	1	1	0	KRBA1	family	repeat
RNA_pol_Rpb1_1	PF04997.7	gi|118576747|ref|YP_876490.1|	-	1.1e-84	284.5	0.1	3.6e-83	279.6	0.1	2.2	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_5	PF04998.12	gi|118576747|ref|YP_876490.1|	-	4.9e-83	278.5	0.3	7.3e-83	278.0	0.2	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_2	PF00623.15	gi|118576747|ref|YP_876490.1|	-	2.1e-69	232.7	0.0	3.9e-69	231.8	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|118576747|ref|YP_876490.1|	-	7.7e-33	113.4	0.0	1.7e-32	112.2	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|118576747|ref|YP_876490.1|	-	6.3e-23	80.5	0.0	1.8e-22	79.1	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
TniQ	PF06527.6	gi|118576747|ref|YP_876490.1|	-	0.0087	16.2	0.0	0.84	9.8	0.0	2.5	2	0	0	2	2	2	1	TniQ
NMD3	PF04981.8	gi|118576747|ref|YP_876490.1|	-	4.1	6.4	4.4	3.9	6.5	0.0	2.4	2	1	0	2	2	2	0	NMD3	family
RNA_pol_Rpb2_6	PF00562.23	gi|118576748|ref|YP_876491.1|	-	1.2e-118	396.2	0.0	2.2e-118	395.3	0.0	1.4	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|118576748|ref|YP_876491.1|	-	3.4e-53	179.6	0.0	5.5e-53	178.9	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_7	PF04560.15	gi|118576748|ref|YP_876491.1|	-	2.7e-30	104.4	0.0	5.6e-30	103.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|118576748|ref|YP_876491.1|	-	9.1e-28	95.8	0.1	2.5e-27	94.3	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_2	PF04561.9	gi|118576748|ref|YP_876491.1|	-	4.8e-22	78.2	0.0	1.3e-21	76.8	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_5	PF04567.12	gi|118576748|ref|YP_876491.1|	-	3.5e-12	46.0	0.2	7.2e-12	45.0	0.2	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb2_4	PF04566.8	gi|118576748|ref|YP_876491.1|	-	7e-12	44.9	0.1	1.8e-11	43.6	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
Ribosomal_L37e	PF01907.14	gi|118576748|ref|YP_876491.1|	-	0.25	11.1	0.8	0.61	9.9	0.6	1.6	1	0	0	1	1	1	0	Ribosomal	protein	L37e
Zn_Tnp_IS1595	PF12760.2	gi|118576748|ref|YP_876491.1|	-	0.32	10.8	0.6	0.66	9.8	0.4	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
RNA_pol_Rpb5_C	PF01191.14	gi|118576749|ref|YP_876492.1|	-	1.1e-26	92.2	0.1	1.2e-26	92.0	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
A2M_N	PF01835.14	gi|118576750|ref|YP_876493.1|	-	2.4e-06	27.7	0.0	4.5e-06	26.8	0.0	1.4	1	0	0	1	1	1	1	MG2	domain
A2M_N	PF01835.14	gi|118576751|ref|YP_876494.1|	-	0.0033	17.6	0.0	0.0076	16.4	0.0	1.6	2	0	0	2	2	2	1	MG2	domain
DUF3060	PF11259.3	gi|118576751|ref|YP_876494.1|	-	0.1	12.2	1.5	14	5.3	0.2	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3060)
rOmpB	PF12334.3	gi|118576752|ref|YP_876495.1|	-	0.0026	17.1	0.3	0.0058	16.0	0.1	1.6	1	1	0	1	1	1	1	Rickettsia	outer	membrane	protein	B
Big_2	PF02368.13	gi|118576752|ref|YP_876495.1|	-	0.16	11.8	1.7	7.2	6.5	0.2	2.6	1	1	1	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
Big_3_4	PF13754.1	gi|118576752|ref|YP_876495.1|	-	0.23	11.8	0.2	0.23	11.8	0.1	2.6	3	0	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
Aminotran_5	PF00266.14	gi|118576753|ref|YP_876496.1|	-	4.4e-76	256.0	0.0	5.3e-76	255.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|118576753|ref|YP_876496.1|	-	0.0062	15.7	0.2	0.013	14.6	0.2	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
Asn_synthase	PF00733.16	gi|118576754|ref|YP_876497.1|	-	1.8e-09	37.5	0.1	3e-09	36.7	0.1	1.3	1	0	0	1	1	1	1	Asparagine	synthase
NAD_synthase	PF02540.12	gi|118576754|ref|YP_876497.1|	-	1.4e-07	30.7	0.0	2e-07	30.1	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.8	gi|118576754|ref|YP_876497.1|	-	3.7e-07	29.6	0.1	2.8e-06	26.7	0.0	2.1	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|118576754|ref|YP_876497.1|	-	1.1e-06	27.4	0.1	1.2e-05	24.0	0.1	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|118576754|ref|YP_876497.1|	-	2.3e-05	23.9	0.0	3.7e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|118576754|ref|YP_876497.1|	-	0.0048	16.3	0.0	0.012	15.0	0.0	1.8	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
DUF111	PF01969.12	gi|118576755|ref|YP_876498.1|	-	7.2e-108	360.8	0.3	8.1e-108	360.6	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
Ldh_1_N	PF00056.18	gi|118576756|ref|YP_876499.1|	-	2.2e-39	134.4	1.0	2.5e-39	134.3	0.2	1.5	2	0	0	2	2	2	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|118576756|ref|YP_876499.1|	-	1.9e-26	92.8	0.1	2.9e-26	92.2	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
AIRC	PF00731.15	gi|118576757|ref|YP_876500.1|	-	2e-26	92.0	5.2	3.1e-26	91.4	3.6	1.2	1	0	0	1	1	1	1	AIR	carboxylase
Radical_SAM	PF04055.16	gi|118576758|ref|YP_876501.1|	-	1e-11	45.2	0.0	2.2e-11	44.2	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|118576758|ref|YP_876501.1|	-	0.022	14.6	0.0	0.082	12.7	0.0	2.0	2	1	0	2	2	2	0	B12	binding	domain
DUF3820	PF12843.2	gi|118576759|ref|YP_876502.1|	-	0.1	12.1	0.1	0.16	11.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3820)
Trypan_PARP	PF05887.6	gi|118576760|ref|YP_876503.1|	-	9.7e-16	57.8	25.7	2e-15	56.8	17.8	1.5	1	0	0	1	1	1	1	Procyclic	acidic	repetitive	protein	(PARP)
A2M_N	PF01835.14	gi|118576760|ref|YP_876503.1|	-	2.9e-06	27.4	0.0	5.1e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	MG2	domain
Neisseria_TspB	PF05616.8	gi|118576760|ref|YP_876503.1|	-	0.0016	16.9	21.1	0.0023	16.3	14.6	1.1	1	0	0	1	1	1	1	Neisseria	meningitidis	TspB	protein
DUF2360	PF10152.4	gi|118576760|ref|YP_876503.1|	-	0.12	12.6	1.6	0.16	12.2	1.1	1.2	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
MelC1	PF06236.6	gi|118576761|ref|YP_876504.1|	-	0.015	15.2	4.3	0.019	14.9	0.1	2.7	3	0	0	3	3	3	0	Tyrosinase	co-factor	MelC1
Zip	PF02535.17	gi|118576762|ref|YP_876505.1|	-	2.8e-05	23.3	16.7	2.8e-05	23.3	11.6	1.9	2	0	0	2	2	2	1	ZIP	Zinc	transporter
Cu-oxidase_3	PF07732.10	gi|118576763|ref|YP_876506.1|	-	6.1e-24	84.0	2.9	5.3e-21	74.5	0.4	2.2	2	0	0	2	2	2	2	Multicopper	oxidase
Cu-oxidase_2	PF07731.9	gi|118576763|ref|YP_876506.1|	-	3.7e-18	65.3	8.8	8.9e-08	31.7	0.1	3.2	3	0	0	3	3	3	3	Multicopper	oxidase
DUF4423	PF14394.1	gi|118576765|ref|YP_876508.1|	-	0.00018	21.1	0.0	0.00024	20.6	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|118576765|ref|YP_876508.1|	-	0.0006	19.5	0.0	0.00099	18.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|118576765|ref|YP_876508.1|	-	0.006	16.2	0.0	0.009	15.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_9	PF08221.6	gi|118576765|ref|YP_876508.1|	-	0.0084	15.9	0.0	0.01	15.6	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Cullin_Nedd8	PF10557.4	gi|118576765|ref|YP_876508.1|	-	0.015	15.1	0.0	0.046	13.5	0.0	1.7	2	0	0	2	2	2	0	Cullin	protein	neddylation	domain
HTH_45	PF14947.1	gi|118576765|ref|YP_876508.1|	-	0.025	14.4	0.0	0.038	13.8	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|118576765|ref|YP_876508.1|	-	0.058	13.7	0.0	0.13	12.5	0.0	1.6	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|118576765|ref|YP_876508.1|	-	0.068	12.8	0.0	0.098	12.3	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
FeoC	PF09012.5	gi|118576765|ref|YP_876508.1|	-	0.077	12.7	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_5	PF01022.15	gi|118576765|ref|YP_876508.1|	-	0.14	11.7	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
VWA_2	PF13519.1	gi|118576766|ref|YP_876509.1|	-	1.5e-13	51.2	0.0	6.7e-13	49.0	0.0	2.0	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|118576766|ref|YP_876509.1|	-	0.054	13.2	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	von	Willebrand	factor	type	A	domain
AAA_5	PF07728.9	gi|118576767|ref|YP_876510.1|	-	7e-11	42.0	0.0	1.4e-06	28.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|118576767|ref|YP_876510.1|	-	5.4e-06	26.0	0.0	0.00015	21.3	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|118576767|ref|YP_876510.1|	-	0.00016	21.2	0.0	0.00093	18.7	0.0	2.1	3	0	0	3	3	3	1	Sigma-54	interaction	domain
AAA_PrkA	PF08298.6	gi|118576767|ref|YP_876510.1|	-	0.00021	20.1	0.0	0.0012	17.6	0.0	1.9	1	1	0	1	1	1	1	PrkA	AAA	domain
Mg_chelatase	PF01078.16	gi|118576767|ref|YP_876510.1|	-	0.0023	17.1	0.0	0.19	10.8	0.0	2.5	2	1	1	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
MCM	PF00493.18	gi|118576767|ref|YP_876510.1|	-	0.0046	15.8	0.0	0.012	14.3	0.0	1.6	2	0	0	2	2	2	1	MCM2/3/5	family
Med12-PQL	PF12144.3	gi|118576767|ref|YP_876510.1|	-	0.059	12.7	1.0	0.1	11.9	0.7	1.4	1	0	0	1	1	1	0	Eukaryotic	Mediator	12	catenin-binding	domain
CwfJ_C_1	PF04677.10	gi|118576768|ref|YP_876511.1|	-	0.0049	16.5	0.7	0.019	14.5	0.5	1.8	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
Terminase_GpA	PF05876.7	gi|118576768|ref|YP_876511.1|	-	0.023	13.0	0.3	0.025	12.9	0.2	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
zf-PHD-like	PF15446.1	gi|118576768|ref|YP_876511.1|	-	0.066	12.5	1.6	0.11	11.7	0.1	1.8	1	1	1	2	2	2	0	PHD/FYVE-zinc-finger	like	domain
DUF164	PF02591.10	gi|118576768|ref|YP_876511.1|	-	0.085	12.6	0.5	1.4	8.8	0.0	2.2	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
Sgf11	PF08209.6	gi|118576768|ref|YP_876511.1|	-	0.21	10.9	1.3	1.9	7.8	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
DUF2946	PF11162.3	gi|118576770|ref|YP_876513.1|	-	0.11	12.7	0.0	0.11	12.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2946)
zf-PHD-like	PF15446.1	gi|118576776|ref|YP_876519.1|	-	0.03	13.5	0.1	0.03	13.5	0.1	1.3	1	1	0	1	1	1	0	PHD/FYVE-zinc-finger	like	domain
Ribosomal_S13	PF00416.17	gi|118576779|ref|YP_876522.1|	-	1.2e-26	93.2	0.0	1.5e-26	92.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
S4	PF01479.20	gi|118576780|ref|YP_876523.1|	-	3.3e-10	39.2	0.0	8.2e-10	37.9	0.0	1.7	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|118576780|ref|YP_876523.1|	-	8e-05	22.9	0.6	0.00012	22.3	0.4	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
SIS	PF01380.17	gi|118576781|ref|YP_876524.1|	-	2.8e-42	143.4	0.1	9.3e-23	80.2	0.3	2.4	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|118576781|ref|YP_876524.1|	-	2.1e-22	79.4	0.1	4.2e-22	78.5	0.1	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|118576781|ref|YP_876524.1|	-	7.9e-18	64.2	0.1	6.1e-14	51.4	0.0	2.4	2	0	0	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|118576781|ref|YP_876524.1|	-	6.4e-17	61.4	0.0	1.7e-16	60.0	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|118576781|ref|YP_876524.1|	-	1.6e-06	27.0	0.0	2.5e-06	26.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|118576781|ref|YP_876524.1|	-	9.2e-05	22.1	5.8	0.00014	21.5	0.4	3.0	2	1	1	3	3	3	1	SIS	domain
DBI_PRT	PF02277.12	gi|118576782|ref|YP_876525.1|	-	2.4e-26	92.5	0.7	4.2e-26	91.8	0.5	1.4	1	0	0	1	1	1	1	Phosphoribosyltransferase
Lactamase_B	PF00753.22	gi|118576783|ref|YP_876526.1|	-	2.2e-22	79.6	3.3	2.8e-22	79.3	2.3	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|118576783|ref|YP_876526.1|	-	0.0027	17.2	0.1	0.003	17.1	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
YjeF_N	PF03853.10	gi|118576784|ref|YP_876527.1|	-	4e-46	156.7	0.0	4.7e-46	156.4	0.0	1.0	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
Serpin	PF00079.15	gi|118576786|ref|YP_876529.1|	-	3.5e-89	299.5	0.0	4e-89	299.3	0.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
CBM27	PF09212.5	gi|118576786|ref|YP_876529.1|	-	0.041	13.9	0.0	0.066	13.2	0.0	1.2	1	0	0	1	1	1	0	Carbohydrate	binding	module	27
DUF4623	PF15416.1	gi|118576787|ref|YP_876530.1|	-	0.097	11.0	0.0	0.11	10.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4623)
DUF262	PF03235.9	gi|118576788|ref|YP_876531.1|	-	9.5e-36	123.8	0.0	1.6e-35	123.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF262
DUF1524	PF07510.6	gi|118576788|ref|YP_876531.1|	-	7.9e-20	71.1	0.0	1.4e-19	70.3	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1524)
3HCDH	PF00725.17	gi|118576788|ref|YP_876531.1|	-	0.096	13.1	0.0	0.24	11.8	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
Translin	PF01997.11	gi|118576789|ref|YP_876532.1|	-	3.7e-25	88.6	0.0	5e-25	88.2	0.0	1.1	1	0	0	1	1	1	1	Translin	family
PseudoU_synth_1	PF01416.15	gi|118576789|ref|YP_876532.1|	-	0.014	15.8	0.0	0.023	15.1	0.0	1.3	1	0	0	1	1	1	0	tRNA	pseudouridine	synthase
DUF2379	PF09543.5	gi|118576789|ref|YP_876532.1|	-	0.48	10.3	5.8	0.23	11.4	0.3	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2379)
RNA_pol_N	PF01194.12	gi|118576790|ref|YP_876533.1|	-	9.5e-28	96.0	0.3	1.3e-27	95.6	0.2	1.2	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|118576790|ref|YP_876533.1|	-	0.014	15.4	0.4	0.029	14.4	0.3	1.5	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Enolase_C	PF00113.17	gi|118576791|ref|YP_876534.1|	-	8.9e-54	182.4	0.0	1.2e-53	182.0	0.0	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|118576791|ref|YP_876534.1|	-	1.8e-25	89.3	0.1	3.9e-25	88.3	0.0	1.6	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.1	gi|118576791|ref|YP_876534.1|	-	0.00084	19.2	3.0	0.0046	16.9	0.3	2.9	3	1	0	3	3	3	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|118576791|ref|YP_876534.1|	-	0.021	15.3	0.1	0.12	12.9	0.0	2.4	1	1	1	2	2	2	0	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Ribosomal_S2	PF00318.15	gi|118576792|ref|YP_876535.1|	-	7.9e-33	113.4	0.0	4.7e-16	58.6	0.0	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Peripla_BP_4	PF13407.1	gi|118576792|ref|YP_876535.1|	-	0.029	13.7	0.1	0.056	12.7	0.0	1.4	2	0	0	2	2	2	0	Periplasmic	binding	protein	domain
Memo	PF01875.12	gi|118576793|ref|YP_876536.1|	-	1e-59	201.6	0.0	1.2e-59	201.4	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
GHMP_kinases_N	PF00288.21	gi|118576794|ref|YP_876537.1|	-	8.4e-17	60.9	5.0	2e-16	59.7	3.5	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|118576794|ref|YP_876537.1|	-	3.3e-09	36.8	3.0	4.1e-09	36.4	0.4	2.1	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
AA_kinase	PF00696.23	gi|118576795|ref|YP_876538.1|	-	7e-27	94.5	0.0	8.4e-27	94.2	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
NUDIX	PF00293.23	gi|118576796|ref|YP_876539.1|	-	1.5e-15	57.0	0.0	2.1e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
polyprenyl_synt	PF00348.12	gi|118576797|ref|YP_876540.1|	-	1.2e-67	227.4	0.1	1.5e-67	227.1	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
tRNA-synt_1c	PF00749.16	gi|118576798|ref|YP_876541.1|	-	6.1e-69	232.0	0.0	7.4e-69	231.7	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|118576798|ref|YP_876541.1|	-	1.1e-17	64.3	0.0	1.9e-17	63.4	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
FAA_hydrolase	PF01557.13	gi|118576799|ref|YP_876542.1|	-	2.3e-68	229.9	0.0	2.7e-68	229.6	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
DUF2437	PF10370.4	gi|118576799|ref|YP_876542.1|	-	0.0043	17.3	0.0	0.013	15.8	0.0	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2437)
UPF0147	PF03685.8	gi|118576800|ref|YP_876543.1|	-	2e-31	107.6	0.1	2.3e-31	107.4	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|118576800|ref|YP_876543.1|	-	0.017	15.1	0.0	2.9	8.0	0.0	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0253)
PPDK_N	PF01326.14	gi|118576800|ref|YP_876543.1|	-	0.063	12.2	0.0	0.066	12.2	0.0	1.1	1	0	0	1	1	1	0	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
DOT1	PF08123.8	gi|118576801|ref|YP_876544.1|	-	7.2e-08	31.9	0.1	1.7e-06	27.4	0.0	2.2	1	1	1	2	2	2	1	Histone	methylation	protein	DOT1
Methyltransf_18	PF12847.2	gi|118576801|ref|YP_876544.1|	-	0.0069	16.9	0.2	0.01	16.3	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|118576801|ref|YP_876544.1|	-	0.15	12.0	0.1	0.41	10.6	0.1	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
tRNA_anti-codon	PF01336.20	gi|118576804|ref|YP_876547.1|	-	7.9e-08	32.0	0.1	2.3e-07	30.5	0.0	1.8	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
DUF3006	PF11213.3	gi|118576804|ref|YP_876547.1|	-	0.058	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
Mpt_N	PF09176.6	gi|118576804|ref|YP_876547.1|	-	0.089	12.6	0.0	0.21	11.4	0.0	1.6	1	0	0	1	1	1	0	Methylene-tetrahydromethanopterin	dehydrogenase,	N-terminal
ResIII	PF04851.10	gi|118576805|ref|YP_876548.1|	-	4.2e-20	72.3	0.0	7.2e-20	71.5	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|118576805|ref|YP_876548.1|	-	9.5e-15	54.4	0.0	1.9e-14	53.5	0.0	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118576805|ref|YP_876548.1|	-	8.8e-09	35.1	0.1	3e-08	33.4	0.0	1.9	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
T2SE	PF00437.15	gi|118576805|ref|YP_876548.1|	-	7.5e-05	21.7	0.0	0.00014	20.8	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|118576805|ref|YP_876548.1|	-	0.00011	21.9	0.0	0.0052	16.5	0.0	2.8	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_11	PF13086.1	gi|118576805|ref|YP_876548.1|	-	0.00082	19.0	0.4	0.26	10.8	0.0	3.0	2	1	1	3	3	3	1	AAA	domain
UvrD-helicase	PF00580.16	gi|118576805|ref|YP_876548.1|	-	0.024	13.9	0.2	0.4	9.9	0.0	2.4	1	1	1	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
AAA_22	PF13401.1	gi|118576805|ref|YP_876548.1|	-	0.032	14.3	0.2	0.24	11.5	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|118576805|ref|YP_876548.1|	-	0.18	11.3	0.1	0.57	9.7	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
PLDc_2	PF13091.1	gi|118576806|ref|YP_876549.1|	-	5.8e-11	42.2	0.0	1.1e-10	41.3	0.0	1.4	1	0	0	1	1	1	1	PLD-like	domain
DUF1998	PF09369.5	gi|118576807|ref|YP_876550.1|	-	2e-15	57.1	0.9	4.6e-15	55.9	0.6	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.26	gi|118576808|ref|YP_876551.1|	-	9.4e-11	41.4	0.1	2.4e-10	40.1	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DUF2605	PF10792.4	gi|118576808|ref|YP_876551.1|	-	0.029	14.0	0.0	0.061	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2605)
HATPase_c	PF02518.21	gi|118576809|ref|YP_876552.1|	-	4e-27	94.1	1.0	6e-19	67.7	0.0	3.4	3	0	0	3	3	3	2	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|118576809|ref|YP_876552.1|	-	1e-24	86.7	1.0	7.9e-21	74.1	0.6	2.8	2	0	0	2	2	2	2	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_5	PF14501.1	gi|118576809|ref|YP_876552.1|	-	6.1e-08	32.2	2.4	4e-07	29.6	0.0	3.1	3	0	0	3	3	3	1	GHKL	domain
HATPase_c_2	PF13581.1	gi|118576809|ref|YP_876552.1|	-	0.00041	20.1	0.0	0.0042	16.8	0.0	2.5	2	0	0	2	2	2	1	Histidine	kinase-like	ATPase	domain
DNA_methylase	PF00145.12	gi|118576810|ref|YP_876553.1|	-	1.2e-81	274.4	0.0	2.4e-81	273.4	0.0	1.4	1	1	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.5	gi|118576810|ref|YP_876553.1|	-	0.015	14.8	0.0	0.024	14.1	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Vsr	PF03852.10	gi|118576811|ref|YP_876554.1|	-	6.2e-17	60.9	0.1	1.5e-16	59.7	0.0	1.7	2	0	0	2	2	2	1	DNA	mismatch	endonuclease	Vsr
DUF559	PF04480.7	gi|118576811|ref|YP_876554.1|	-	3.9e-05	23.2	0.0	0.00014	21.5	0.0	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF559)
DUF2502	PF10697.4	gi|118576811|ref|YP_876554.1|	-	6.3	6.9	7.8	16	5.6	5.4	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2502)
CorA	PF01544.13	gi|118576812|ref|YP_876555.1|	-	7.8e-64	215.4	0.4	8.9e-64	215.3	0.3	1.0	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
AAA_13	PF13166.1	gi|118576812|ref|YP_876555.1|	-	0.005	15.3	0.5	0.0065	14.9	0.3	1.0	1	0	0	1	1	1	1	AAA	domain
TSP_3	PF02412.13	gi|118576813|ref|YP_876556.1|	-	1.1e-24	85.6	283.2	0.00026	20.3	0.3	30.7	30	11	2	32	32	32	22	Thrombospondin	type	3	repeat
ChitinaseA_N	PF08329.5	gi|118576813|ref|YP_876556.1|	-	0.21	11.3	4.2	11	5.7	0.1	3.6	3	0	0	3	3	3	0	Chitinase	A,	N-terminal	domain
TSP_3	PF02412.13	gi|118576815|ref|YP_876558.1|	-	4.5e-35	118.8	177.5	0.00013	21.3	2.3	21.1	19	10	1	20	20	20	14	Thrombospondin	type	3	repeat
ChitinaseA_N	PF08329.5	gi|118576815|ref|YP_876558.1|	-	0.32	10.7	5.3	0.85	9.3	0.0	3.5	3	0	0	3	3	3	0	Chitinase	A,	N-terminal	domain
Phage_endo_I	PF05367.6	gi|118576818|ref|YP_876561.1|	-	0.015	14.6	0.5	11	5.3	0.0	3.2	3	0	0	3	3	3	0	Phage	endonuclease	I
Ham1p_like	PF01725.11	gi|118576819|ref|YP_876562.1|	-	1.9e-28	99.1	0.0	2.1e-28	98.9	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
APH	PF01636.18	gi|118576820|ref|YP_876563.1|	-	8.7e-10	38.7	2.1	5.6e-06	26.2	0.8	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|118576820|ref|YP_876563.1|	-	3.9e-09	35.8	0.0	2.6e-05	23.3	0.0	2.1	2	0	0	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.20	gi|118576820|ref|YP_876563.1|	-	1.2e-07	31.1	0.0	1.7e-07	30.6	0.0	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
RIO1	PF01163.17	gi|118576820|ref|YP_876563.1|	-	2.1e-05	23.9	0.0	3.3e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
Pkinase_Tyr	PF07714.12	gi|118576820|ref|YP_876563.1|	-	0.01	14.8	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Peptidase_M22	PF00814.20	gi|118576821|ref|YP_876564.1|	-	8e-49	166.5	0.0	9.1e-49	166.3	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
CmcH_NodU	PF02543.10	gi|118576821|ref|YP_876564.1|	-	0.089	11.9	0.0	0.11	11.6	0.0	1.1	1	0	0	1	1	1	0	Carbamoyltransferase
MMR_HSR1_C	PF08438.5	gi|118576823|ref|YP_876566.1|	-	8e-28	96.8	0.0	1.3e-27	96.1	0.0	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|118576823|ref|YP_876566.1|	-	7.7e-17	61.3	0.0	1.7e-16	60.1	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|118576823|ref|YP_876566.1|	-	1.1e-11	44.4	0.1	2.3e-11	43.3	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|118576823|ref|YP_876566.1|	-	1.9e-07	30.4	0.1	4.2e-07	29.3	0.0	1.6	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.8	gi|118576823|ref|YP_876566.1|	-	0.00015	21.5	0.1	0.00045	19.9	0.0	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF933)
AAA_18	PF13238.1	gi|118576824|ref|YP_876567.1|	-	0.017	15.4	0.0	0.027	14.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
TGT	PF01702.13	gi|118576825|ref|YP_876568.1|	-	2.8e-44	151.2	0.0	3.8e-44	150.7	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
Fer4	PF00037.22	gi|118576826|ref|YP_876569.1|	-	7.9e-12	44.2	11.5	1.7e-06	27.4	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|118576826|ref|YP_876569.1|	-	1.7e-10	40.3	8.7	3.6e-05	23.4	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|118576826|ref|YP_876569.1|	-	6.4e-10	39.2	4.4	9.3e-10	38.7	3.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|118576826|ref|YP_876569.1|	-	1.3e-08	34.5	4.0	2.3e-08	33.6	2.8	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118576826|ref|YP_876569.1|	-	1.4e-08	34.1	9.3	0.00011	21.9	1.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|118576826|ref|YP_876569.1|	-	4.8e-08	32.7	1.6	6.7e-08	32.2	1.1	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|118576826|ref|YP_876569.1|	-	4.7e-06	26.7	7.0	1.5e-05	25.1	4.9	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|118576826|ref|YP_876569.1|	-	7.6e-06	26.4	10.2	0.00052	20.5	7.1	2.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|118576826|ref|YP_876569.1|	-	1.1e-05	26.0	1.4	0.045	14.4	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|118576826|ref|YP_876569.1|	-	1.5e-05	25.2	5.9	0.008	16.5	1.0	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|118576826|ref|YP_876569.1|	-	1.8e-05	24.6	8.5	0.038	14.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|118576826|ref|YP_876569.1|	-	4e-05	23.5	3.7	9.6e-05	22.3	2.6	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|118576826|ref|YP_876569.1|	-	8.1e-05	22.8	12.5	0.044	14.3	2.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|118576826|ref|YP_876569.1|	-	0.0022	18.3	6.4	0.047	14.0	4.4	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|118576826|ref|YP_876569.1|	-	0.0034	17.7	6.7	0.19	12.1	1.6	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
DUF3000	PF11452.3	gi|118576827|ref|YP_876570.1|	-	0.09	12.0	0.2	0.089	12.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3000)
Beta-Casp	PF10996.3	gi|118576828|ref|YP_876571.1|	-	1.9e-21	76.2	0.0	3.4e-21	75.4	0.0	1.4	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|118576828|ref|YP_876571.1|	-	1.2e-16	60.9	0.0	2.3e-16	60.0	0.0	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|118576828|ref|YP_876571.1|	-	2.7e-11	43.3	0.0	4.8e-11	42.5	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|118576828|ref|YP_876571.1|	-	3.2e-11	42.8	0.3	1.2e-10	41.0	0.0	2.1	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|118576828|ref|YP_876571.1|	-	6.9e-06	25.8	0.0	3.3e-05	23.6	0.0	2.0	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
HhH-GPD	PF00730.20	gi|118576830|ref|YP_876573.1|	-	6.4e-08	32.8	0.0	8.5e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|118576830|ref|YP_876573.1|	-	0.00013	21.4	0.1	0.0031	17.1	0.0	2.5	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
OGG_N	PF07934.7	gi|118576830|ref|YP_876573.1|	-	0.0086	16.0	0.0	0.014	15.3	0.0	1.4	1	0	0	1	1	1	1	8-oxoguanine	DNA	glycosylase,	N-terminal	domain
HHH_2	PF12826.2	gi|118576830|ref|YP_876573.1|	-	0.14	12.0	0.0	0.34	10.8	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Inositol_P	PF00459.20	gi|118576831|ref|YP_876574.1|	-	1.4e-31	109.7	0.0	1.6e-31	109.6	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|118576831|ref|YP_876574.1|	-	2.2e-05	23.4	0.0	3.8e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
AAA	PF00004.24	gi|118576833|ref|YP_876576.1|	-	3.5e-13	49.8	0.0	1.3e-12	48.0	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|118576833|ref|YP_876576.1|	-	8.3e-08	33.0	0.0	1.5e-07	32.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|118576833|ref|YP_876576.1|	-	1.3e-06	28.0	0.0	3.3e-06	26.7	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|118576833|ref|YP_876576.1|	-	1.6e-06	28.2	0.0	0.00026	21.0	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|118576833|ref|YP_876576.1|	-	1.1e-05	24.5	0.0	1.8e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|118576833|ref|YP_876576.1|	-	2.3e-05	24.2	0.0	3.5e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|118576833|ref|YP_876576.1|	-	4.1e-05	23.4	0.0	7.2e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|118576833|ref|YP_876576.1|	-	4.5e-05	23.7	0.0	9.4e-05	22.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Rad17	PF03215.10	gi|118576833|ref|YP_876576.1|	-	4.8e-05	22.2	0.0	0.016	13.9	0.0	2.2	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|118576833|ref|YP_876576.1|	-	9.3e-05	22.5	0.0	0.0012	19.0	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|118576833|ref|YP_876576.1|	-	0.00021	21.0	0.1	0.00044	19.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.7	gi|118576833|ref|YP_876576.1|	-	0.00036	19.6	0.0	0.00058	19.0	0.0	1.2	1	0	0	1	1	1	1	Zeta	toxin
TIP49	PF06068.8	gi|118576833|ref|YP_876576.1|	-	0.00085	18.1	0.0	0.0016	17.2	0.0	1.4	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_2	PF07724.9	gi|118576833|ref|YP_876576.1|	-	0.0013	18.6	0.0	0.0022	17.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
NACHT	PF05729.7	gi|118576833|ref|YP_876576.1|	-	0.0022	17.6	0.0	2.4	7.7	0.0	2.4	2	0	0	2	2	2	2	NACHT	domain
Sigma54_activ_2	PF14532.1	gi|118576833|ref|YP_876576.1|	-	0.0024	17.9	0.0	0.0042	17.1	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|118576833|ref|YP_876576.1|	-	0.0086	15.2	0.1	0.018	14.1	0.0	1.5	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|118576833|ref|YP_876576.1|	-	0.0096	15.8	0.0	0.015	15.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|118576833|ref|YP_876576.1|	-	0.013	15.1	0.1	0.022	14.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|118576833|ref|YP_876576.1|	-	0.026	13.9	0.0	0.065	12.6	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_24	PF13479.1	gi|118576833|ref|YP_876576.1|	-	0.029	13.9	0.0	0.049	13.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
IPT	PF01745.11	gi|118576833|ref|YP_876576.1|	-	0.033	13.3	0.0	0.062	12.4	0.0	1.4	1	0	0	1	1	1	0	Isopentenyl	transferase
NB-ARC	PF00931.17	gi|118576833|ref|YP_876576.1|	-	0.044	12.6	0.0	0.059	12.2	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
PPR_3	PF13812.1	gi|118576833|ref|YP_876576.1|	-	0.071	13.4	0.0	2.2	8.7	0.0	2.7	2	0	0	2	2	2	0	Pentatricopeptide	repeat	domain
SKI	PF01202.17	gi|118576833|ref|YP_876576.1|	-	0.072	12.9	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	Shikimate	kinase
AAA_25	PF13481.1	gi|118576833|ref|YP_876576.1|	-	0.078	12.3	0.0	0.14	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|118576833|ref|YP_876576.1|	-	0.078	12.4	0.0	0.19	11.1	0.0	1.7	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_11	PF13086.1	gi|118576833|ref|YP_876576.1|	-	0.089	12.3	0.0	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
RFC1	PF08519.7	gi|118576833|ref|YP_876576.1|	-	0.099	12.3	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	Replication	factor	RFC1	C	terminal	domain
DUF2116	PF09889.4	gi|118576834|ref|YP_876577.1|	-	0.83	9.4	0.1	0.83	9.4	0.1	2.5	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF2175	PF09943.4	gi|118576834|ref|YP_876577.1|	-	1.5	8.9	5.5	0.65	10.0	0.8	2.3	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
GlutR_N	PF05201.10	gi|118576836|ref|YP_876579.1|	-	1.3e-30	106.0	0.0	2.2e-30	105.2	0.0	1.4	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|118576836|ref|YP_876579.1|	-	4.4e-12	46.2	0.0	9.3e-12	45.2	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
LVIVD	PF08309.6	gi|118576836|ref|YP_876579.1|	-	0.071	12.1	0.0	0.14	11.1	0.0	1.5	1	0	0	1	1	1	0	LVIVD	repeat
DUF1059	PF06348.6	gi|118576837|ref|YP_876580.1|	-	7.8e-08	32.0	0.1	8.8e-08	31.8	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1059)
Imm31	PF15595.1	gi|118576837|ref|YP_876580.1|	-	0.12	12.1	0.0	0.13	12.0	0.0	1.1	1	0	0	1	1	1	0	Immunity	protein	31
NAD_binding_1	PF00175.16	gi|118576838|ref|YP_876581.1|	-	1.5e-13	51.2	0.0	3.2e-13	50.2	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.19	gi|118576838|ref|YP_876581.1|	-	1.2e-10	41.3	0.0	1.9e-10	40.7	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
Carboxyl_trans	PF01039.17	gi|118576839|ref|YP_876582.1|	-	9.8e-182	604.6	0.5	1.1e-181	604.5	0.3	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|118576839|ref|YP_876582.1|	-	0.0001	21.6	0.2	0.00024	20.3	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
CPSase_L_D2	PF02786.12	gi|118576840|ref|YP_876583.1|	-	1.5e-68	230.1	0.0	2.7e-68	229.4	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_C	PF02785.14	gi|118576840|ref|YP_876583.1|	-	4.2e-31	107.0	0.0	7.4e-31	106.3	0.0	1.4	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
CPSase_L_chain	PF00289.17	gi|118576840|ref|YP_876583.1|	-	1.5e-30	105.5	0.0	2.5e-30	104.7	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|118576840|ref|YP_876583.1|	-	1.6e-14	54.0	0.0	2.8e-14	53.2	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|118576840|ref|YP_876583.1|	-	2.6e-09	36.3	0.0	0.00036	19.3	0.0	2.1	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|118576840|ref|YP_876583.1|	-	1.7e-07	30.7	0.0	2.7e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|118576840|ref|YP_876583.1|	-	2.3e-07	30.5	0.0	2e-06	27.4	0.0	2.1	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|118576840|ref|YP_876583.1|	-	0.00026	20.4	0.0	0.00076	18.9	0.0	1.7	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|118576840|ref|YP_876583.1|	-	0.00066	19.5	0.0	0.002	18.0	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|118576840|ref|YP_876583.1|	-	0.069	12.3	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	ATP-grasp	domain
Biotin_lipoyl	PF00364.17	gi|118576841|ref|YP_876584.1|	-	3.6e-17	61.7	4.7	5.7e-17	61.1	3.3	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|118576841|ref|YP_876584.1|	-	5.1e-14	51.6	2.9	1.6e-08	34.0	0.2	2.3	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_3	PF13437.1	gi|118576841|ref|YP_876584.1|	-	3e-08	33.9	0.5	0.0029	17.9	0.1	2.6	3	0	0	3	3	3	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|118576841|ref|YP_876584.1|	-	7.5e-06	25.3	2.7	0.031	13.4	0.1	2.1	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|118576841|ref|YP_876584.1|	-	1.2e-05	24.7	1.5	0.0022	17.3	0.1	2.3	1	1	1	2	2	2	2	HlyD	family	secretion	protein
DUF2118	PF09891.4	gi|118576841|ref|YP_876584.1|	-	0.00032	20.4	0.2	0.00057	19.6	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
GCV_H	PF01597.14	gi|118576841|ref|YP_876584.1|	-	0.001	18.7	1.8	0.0015	18.2	0.7	1.6	1	1	1	2	2	2	1	Glycine	cleavage	H-protein
PASTA	PF03793.14	gi|118576841|ref|YP_876584.1|	-	0.002	17.7	5.4	0.29	10.8	0.3	2.6	2	1	1	3	3	3	2	PASTA	domain
RnfC_N	PF13375.1	gi|118576841|ref|YP_876584.1|	-	0.0092	15.6	1.8	0.019	14.6	1.3	1.6	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.17	gi|118576841|ref|YP_876584.1|	-	0.025	14.6	3.4	0.79	9.8	0.4	2.8	1	1	1	2	2	2	0	Peptidase	family	M23
QRPTase_N	PF02749.11	gi|118576841|ref|YP_876584.1|	-	0.034	13.9	0.2	7	6.5	0.0	2.4	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
NQRA	PF05896.6	gi|118576841|ref|YP_876584.1|	-	0.072	12.2	0.5	0.11	11.6	0.3	1.3	1	0	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
Big_3_3	PF13750.1	gi|118576841|ref|YP_876584.1|	-	0.16	11.3	0.2	0.3	10.5	0.1	1.4	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	3)
AhpC-TSA	PF00578.16	gi|118576842|ref|YP_876585.1|	-	2.4e-33	114.4	0.0	2.7e-33	114.2	0.0	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|118576842|ref|YP_876585.1|	-	8.7e-22	77.2	0.0	1e-21	77.0	0.0	1.0	1	0	0	1	1	1	1	Redoxin
M60-like	PF13402.1	gi|118576842|ref|YP_876585.1|	-	0.07	12.0	0.0	0.078	11.8	0.0	1.1	1	0	0	1	1	1	0	Peptidase	M60-like	family
Oxidored_q4	PF00507.14	gi|118576843|ref|YP_876586.1|	-	2.4e-15	56.2	0.6	3e-15	55.8	0.4	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
RTA1	PF04479.8	gi|118576843|ref|YP_876586.1|	-	0.013	15.0	0.4	0.017	14.5	0.3	1.2	1	0	0	1	1	1	0	RTA1	like	protein
DUF805	PF05656.9	gi|118576843|ref|YP_876586.1|	-	0.27	11.0	3.0	0.33	10.7	1.5	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF805)
Oxidored_q6	PF01058.17	gi|118576844|ref|YP_876587.1|	-	1.4e-24	86.2	0.1	1.9e-24	85.7	0.1	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.14	gi|118576845|ref|YP_876588.1|	-	3.6e-26	91.3	0.0	7.9e-26	90.3	0.0	1.6	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Complex1_49kDa	PF00346.14	gi|118576846|ref|YP_876589.1|	-	2.2e-62	210.5	0.0	1.4e-48	165.2	0.0	2.3	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
DUF3195	PF11424.3	gi|118576846|ref|YP_876589.1|	-	0.009	16.1	1.1	0.06	13.5	0.2	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3195)
NADHdh	PF00146.16	gi|118576847|ref|YP_876590.1|	-	1e-77	261.2	14.5	1.5e-77	260.7	10.0	1.2	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.22	gi|118576848|ref|YP_876591.1|	-	2.3e-12	45.9	11.0	2.6e-09	36.2	1.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|118576848|ref|YP_876591.1|	-	3.7e-10	40.0	7.8	6.2e-10	39.2	5.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|118576848|ref|YP_876591.1|	-	1.6e-09	37.3	18.1	1.7e-06	27.6	7.3	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|118576848|ref|YP_876591.1|	-	2e-08	33.9	19.9	2.7e-06	27.1	7.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118576848|ref|YP_876591.1|	-	2.4e-08	33.4	10.8	6.9e-05	22.5	1.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|118576848|ref|YP_876591.1|	-	9.8e-08	32.6	15.8	1.3e-05	25.8	6.1	1.8	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|118576848|ref|YP_876591.1|	-	5.5e-07	29.7	8.1	1.8e-06	28.0	5.9	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|118576848|ref|YP_876591.1|	-	5.8e-07	29.7	3.4	0.002	18.4	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|118576848|ref|YP_876591.1|	-	5.1e-06	26.4	17.9	0.00039	20.3	7.1	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|118576848|ref|YP_876591.1|	-	5.2e-06	26.0	1.8	5.2e-06	26.0	1.2	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|118576848|ref|YP_876591.1|	-	1e-05	25.4	8.9	0.0024	18.0	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|118576848|ref|YP_876591.1|	-	8e-05	23.1	3.5	0.062	13.8	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|118576848|ref|YP_876591.1|	-	0.0025	18.1	11.7	0.0062	16.9	0.7	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|118576848|ref|YP_876591.1|	-	0.0058	17.1	4.0	0.0058	17.1	2.8	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
DUF2607	PF10795.4	gi|118576848|ref|YP_876591.1|	-	0.035	13.9	0.2	0.063	13.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2607)
Fer4_13	PF13370.1	gi|118576848|ref|YP_876591.1|	-	0.051	13.9	9.7	0.11	12.8	0.2	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Oxidored_q3	PF00499.15	gi|118576849|ref|YP_876592.1|	-	6.8e-20	71.3	7.7	7.8e-20	71.1	5.4	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF4040	PF13244.1	gi|118576849|ref|YP_876592.1|	-	0.0013	18.6	7.9	0.0013	18.6	5.5	2.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4040)
DUF4131	PF13567.1	gi|118576849|ref|YP_876592.1|	-	0.067	12.5	4.9	0.34	10.2	2.6	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
HlyIII	PF03006.15	gi|118576849|ref|YP_876592.1|	-	9.4	5.5	8.7	0.46	9.8	2.4	1.4	2	0	0	2	2	2	0	Haemolysin-III	related
Oxidored_q2	PF00420.19	gi|118576850|ref|YP_876593.1|	-	2.2e-22	78.4	4.0	2.3e-22	78.3	2.8	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
Oxidored_q1	PF00361.15	gi|118576851|ref|YP_876594.1|	-	2.5e-63	213.9	22.1	2.5e-63	213.9	15.3	2.2	2	0	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|118576851|ref|YP_876594.1|	-	0.0056	16.2	0.1	0.0056	16.2	0.1	2.5	3	0	0	3	3	3	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q1	PF00361.15	gi|118576852|ref|YP_876595.1|	-	4.2e-57	193.4	18.5	5e-52	176.8	12.2	3.7	3	1	1	4	4	4	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|118576852|ref|YP_876595.1|	-	3.4e-11	42.5	2.7	4.5e-11	42.1	0.6	2.2	2	0	0	2	2	2	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q1_C	PF01010.14	gi|118576852|ref|YP_876595.1|	-	0.00094	18.7	0.1	1.1	8.6	0.0	2.3	1	1	1	2	2	2	2	NADH-Ubiquinone	oxidoreductase	(complex	I)	subunit	C-terminus
Oxidored_q2	PF00420.19	gi|118576852|ref|YP_876595.1|	-	0.0032	17.0	1.2	0.0032	17.0	0.9	4.0	4	2	0	4	4	4	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
Oxidored_q1	PF00361.15	gi|118576853|ref|YP_876596.1|	-	6.9e-63	212.4	16.4	6.9e-63	212.4	11.3	2.5	2	0	0	2	2	2	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
polyprenyl_synt	PF00348.12	gi|118576854|ref|YP_876597.1|	-	8e-44	149.4	0.1	1.1e-43	148.9	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
DUF454	PF04304.8	gi|118576855|ref|YP_876598.1|	-	0.1	12.6	2.7	4.1	7.5	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF454)
PsaM	PF07465.8	gi|118576857|ref|YP_876600.1|	-	0.22	11.1	0.8	0.27	10.8	0.6	1.1	1	0	0	1	1	1	0	Photosystem	I	protein	M	(PsaM)
Serpin	PF00079.15	gi|118576860|ref|YP_876603.1|	-	1.6e-89	300.6	0.0	1.8e-89	300.4	0.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
TENA_THI-4	PF03070.11	gi|118576862|ref|YP_876605.1|	-	1.3e-11	44.6	0.0	1.6e-11	44.3	0.0	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|118576862|ref|YP_876605.1|	-	1.8e-06	28.0	0.2	4.1e-06	26.9	0.1	1.6	2	0	0	2	2	2	1	Iron-containing	redox	enzyme
Pribosyltran	PF00156.22	gi|118576863|ref|YP_876606.1|	-	5.5e-11	42.2	4.3	2e-10	40.4	3.0	1.9	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
Peptidase_M50	PF02163.17	gi|118576865|ref|YP_876608.1|	-	1.9e-17	62.8	3.1	4.8e-16	58.2	2.2	2.4	1	1	0	1	1	1	1	Peptidase	family	M50
DUF1129	PF06570.6	gi|118576865|ref|YP_876608.1|	-	0.56	9.4	2.7	4.5	6.5	0.7	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
eRF1_2	PF03464.10	gi|118576866|ref|YP_876609.1|	-	1.7e-08	34.8	0.0	2.6e-08	34.2	0.0	1.3	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|118576866|ref|YP_876609.1|	-	0.0074	16.5	0.0	0.021	15.0	0.0	1.8	1	1	0	1	1	1	1	eRF1	domain	3
Acetyltransf_1	PF00583.19	gi|118576867|ref|YP_876610.1|	-	5.5e-19	67.9	0.1	8.1e-19	67.4	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
FR47	PF08445.5	gi|118576867|ref|YP_876610.1|	-	5.8e-10	38.7	0.1	1.9e-09	37.1	0.0	1.8	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_7	PF13508.1	gi|118576867|ref|YP_876610.1|	-	7.3e-09	35.6	0.1	1.1e-08	35.1	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|118576867|ref|YP_876610.1|	-	4.9e-08	33.1	0.0	7.4e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|118576867|ref|YP_876610.1|	-	6.2e-06	26.1	0.0	1e-05	25.4	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|118576867|ref|YP_876610.1|	-	7.8e-05	22.5	0.0	0.00011	22.1	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|118576867|ref|YP_876610.1|	-	0.001	19.0	0.0	0.0014	18.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|118576867|ref|YP_876610.1|	-	0.0038	17.0	0.0	0.0063	16.3	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.1	gi|118576867|ref|YP_876610.1|	-	0.075	13.1	0.0	0.1	12.7	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF4027	PF13219.1	gi|118576868|ref|YP_876611.1|	-	0.1	12.0	1.6	0.19	11.2	1.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4027)
DUF1469	PF07332.6	gi|118576868|ref|YP_876611.1|	-	0.47	10.1	3.0	0.58	9.9	2.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
Zip	PF02535.17	gi|118576868|ref|YP_876611.1|	-	0.55	9.1	2.5	0.65	8.9	1.7	1.0	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF3487	PF11990.3	gi|118576868|ref|YP_876611.1|	-	2.1	7.7	4.7	2.4	7.5	3.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3487)
DUF4064	PF13273.1	gi|118576868|ref|YP_876611.1|	-	2.4	8.3	7.7	4.7	7.3	1.1	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Met_10	PF02475.11	gi|118576869|ref|YP_876612.1|	-	1.9e-56	190.8	0.0	2.3e-56	190.5	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|118576869|ref|YP_876612.1|	-	1.5e-08	34.6	0.1	2.3e-08	34.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|118576869|ref|YP_876612.1|	-	5e-05	22.5	0.0	7e-05	22.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.2	gi|118576869|ref|YP_876612.1|	-	0.00014	22.4	0.0	0.00023	21.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|118576869|ref|YP_876612.1|	-	0.00018	21.1	0.0	0.00025	20.6	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.9	gi|118576869|ref|YP_876612.1|	-	0.00052	19.4	0.1	0.00083	18.7	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|118576869|ref|YP_876612.1|	-	0.0008	19.0	0.0	0.0011	18.5	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.1	gi|118576869|ref|YP_876612.1|	-	0.0029	17.1	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|118576869|ref|YP_876612.1|	-	0.019	14.3	0.3	0.04	13.2	0.1	1.6	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
ABC_tran	PF00005.22	gi|118576871|ref|YP_876614.1|	-	1.5e-38	132.2	0.1	6.7e-18	65.3	0.1	2.7	2	1	0	2	2	2	2	ABC	transporter
RLI	PF04068.10	gi|118576871|ref|YP_876614.1|	-	2.7e-12	46.0	2.6	2.7e-12	46.0	1.8	1.9	2	0	0	2	2	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.1	gi|118576871|ref|YP_876614.1|	-	5e-11	43.1	0.2	0.019	14.9	0.1	4.2	2	2	1	3	3	3	3	AAA	domain
SMC_N	PF02463.14	gi|118576871|ref|YP_876614.1|	-	3e-08	33.1	0.1	0.0018	17.5	0.0	3.2	3	0	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
Fer4_6	PF12837.2	gi|118576871|ref|YP_876614.1|	-	3.6e-05	23.4	12.4	0.00071	19.3	0.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|118576871|ref|YP_876614.1|	-	7.3e-05	22.1	0.9	7.3e-05	22.1	0.6	2.8	3	0	0	3	3	3	1	4Fe-4S	binding	domain
AAA_29	PF13555.1	gi|118576871|ref|YP_876614.1|	-	0.00011	21.5	0.1	0.036	13.5	0.0	2.7	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Fer4_21	PF14697.1	gi|118576871|ref|YP_876614.1|	-	0.00015	21.5	9.5	0.00024	20.8	6.6	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|118576871|ref|YP_876614.1|	-	0.00016	21.9	9.1	0.00049	20.4	6.2	1.9	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
AAA_25	PF13481.1	gi|118576871|ref|YP_876614.1|	-	0.00033	20.1	0.1	0.052	12.9	0.0	2.7	3	0	0	3	3	3	1	AAA	domain
DUF258	PF03193.11	gi|118576871|ref|YP_876614.1|	-	0.00068	18.8	0.1	0.022	13.9	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
MMR_HSR1	PF01926.18	gi|118576871|ref|YP_876614.1|	-	0.002	18.0	0.3	0.2	11.6	0.0	2.6	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
SbcCD_C	PF13558.1	gi|118576871|ref|YP_876614.1|	-	0.0023	17.7	0.4	3.9	7.4	0.1	2.9	2	1	0	2	2	2	2	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|118576871|ref|YP_876614.1|	-	0.003	16.6	0.0	1.3	7.9	0.0	2.9	3	0	0	3	3	3	1	AAA	ATPase	domain
HflK_N	PF12221.3	gi|118576871|ref|YP_876614.1|	-	0.0046	16.6	0.0	0.011	15.3	0.0	1.7	1	0	0	1	1	1	1	Bacterial	membrane	protein	N	terminal
Miro	PF08477.8	gi|118576871|ref|YP_876614.1|	-	0.0062	17.0	0.0	0.5	10.8	0.0	2.5	2	0	0	2	2	2	1	Miro-like	protein
Fer4_10	PF13237.1	gi|118576871|ref|YP_876614.1|	-	0.0067	16.2	9.6	0.012	15.4	6.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_23	PF13476.1	gi|118576871|ref|YP_876614.1|	-	0.011	16.0	0.0	1.9	8.7	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Fer4_11	PF13247.1	gi|118576871|ref|YP_876614.1|	-	0.049	13.5	3.3	0.088	12.7	2.3	1.3	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
MobB	PF03205.9	gi|118576871|ref|YP_876614.1|	-	0.11	12.1	0.3	15	5.2	0.0	3.0	3	0	0	3	3	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Dynamin_N	PF00350.18	gi|118576871|ref|YP_876614.1|	-	0.13	12.1	0.3	10	5.9	0.1	2.3	2	0	0	2	2	2	0	Dynamin	family
AAA_16	PF13191.1	gi|118576871|ref|YP_876614.1|	-	0.15	12.0	2.8	0.4	10.6	0.2	2.8	2	2	0	2	2	2	0	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|118576871|ref|YP_876614.1|	-	0.16	10.8	1.0	5.5	5.7	0.0	2.4	2	0	0	2	2	2	0	NB-ARC	domain
RNA_helicase	PF00910.17	gi|118576871|ref|YP_876614.1|	-	0.18	12.0	0.0	2.8	8.1	0.0	2.4	2	0	0	2	2	2	0	RNA	helicase
FeoB_N	PF02421.13	gi|118576871|ref|YP_876614.1|	-	0.23	10.7	0.4	4.3	6.5	0.1	2.3	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Fer4_3	PF12798.2	gi|118576871|ref|YP_876614.1|	-	0.23	12.1	8.7	0.36	11.5	0.4	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DLIC	PF05783.6	gi|118576871|ref|YP_876614.1|	-	0.25	9.9	0.0	1.2	7.6	0.0	1.8	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
Fer4_2	PF12797.2	gi|118576871|ref|YP_876614.1|	-	0.35	10.8	7.5	1.1	9.2	0.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|118576871|ref|YP_876614.1|	-	0.39	11.0	8.4	0.9	9.8	5.8	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|118576871|ref|YP_876614.1|	-	1.8	9.3	8.4	0.73	10.6	0.1	2.4	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.1	gi|118576871|ref|YP_876614.1|	-	2	9.0	9.6	24	5.5	6.7	2.7	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Ribosomal_S27e	PF01667.12	gi|118576872|ref|YP_876615.1|	-	1.9e-14	52.9	0.3	2.8e-14	52.3	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-ribbon_3	PF13248.1	gi|118576872|ref|YP_876615.1|	-	0.011	14.8	0.6	0.02	14.1	0.4	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|118576872|ref|YP_876615.1|	-	0.033	13.6	0.8	0.06	12.8	0.5	1.4	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
Sua5_yciO_yrdC	PF01300.13	gi|118576874|ref|YP_876617.1|	-	4.9e-22	78.0	0.0	6.4e-22	77.6	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
Lyase_1	PF00206.15	gi|118576875|ref|YP_876618.1|	-	7.9e-50	169.8	0.0	1.4e-49	168.9	0.0	1.4	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.1	gi|118576875|ref|YP_876618.1|	-	1.9e-14	53.4	0.1	4.4e-14	52.3	0.1	1.7	1	0	0	1	1	1	1	Argininosuccinate	lyase	C-terminal
DUF59	PF01883.14	gi|118576876|ref|YP_876619.1|	-	1.3e-14	53.9	0.1	1.7e-14	53.5	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
Fer2_3	PF13085.1	gi|118576877|ref|YP_876620.1|	-	3.3e-29	100.9	0.0	6e-29	100.0	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|118576877|ref|YP_876620.1|	-	3.2e-12	46.2	6.2	7.4e-12	45.1	2.6	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|118576877|ref|YP_876620.1|	-	2.5e-09	37.4	1.3	2.5e-09	37.4	0.9	2.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|118576877|ref|YP_876620.1|	-	3.4e-09	36.3	2.7	3.4e-09	36.3	1.9	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|118576877|ref|YP_876620.1|	-	8.9e-09	35.5	2.0	8.9e-09	35.5	1.4	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|118576877|ref|YP_876620.1|	-	9e-08	32.2	3.9	9e-08	32.2	2.7	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|118576877|ref|YP_876620.1|	-	1.4e-06	28.5	8.4	3.2e-06	27.4	4.0	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118576877|ref|YP_876620.1|	-	3.1e-05	23.6	1.0	3.1e-05	23.6	0.7	3.3	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|118576877|ref|YP_876620.1|	-	0.0001	21.9	1.4	0.00024	20.8	0.1	2.2	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_16	PF13484.1	gi|118576877|ref|YP_876620.1|	-	0.00057	20.5	6.6	0.00069	20.3	3.1	2.2	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|118576877|ref|YP_876620.1|	-	0.00064	19.2	1.3	0.00064	19.2	0.9	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|118576877|ref|YP_876620.1|	-	0.12	12.7	0.9	0.12	12.7	0.6	3.3	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|118576877|ref|YP_876620.1|	-	0.15	12.7	0.8	0.15	12.7	0.5	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|118576877|ref|YP_876620.1|	-	1.6	8.6	13.1	1.6	8.6	5.7	2.8	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|118576877|ref|YP_876620.1|	-	9.3	6.7	12.7	0.19	12.1	1.6	3.0	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Sdh_cyt	PF01127.17	gi|118576878|ref|YP_876621.1|	-	1.4e-07	31.3	1.8	1.8e-07	30.9	1.3	1.1	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
NADHdeh_related	PF10125.4	gi|118576878|ref|YP_876621.1|	-	0.00062	18.9	0.4	0.00086	18.5	0.3	1.4	1	0	0	1	1	1	1	NADH	dehydrogenase	I,	subunit	N	related	protein
Flp_Fap	PF04964.9	gi|118576878|ref|YP_876621.1|	-	1.4	8.5	4.9	9.2	5.9	0.0	2.5	3	0	0	3	3	3	0	Flp/Fap	pilin	component
Sdh_cyt	PF01127.17	gi|118576879|ref|YP_876622.1|	-	4.7e-08	32.8	3.0	6.7e-08	32.3	1.9	1.4	1	1	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
DUF1590	PF07629.6	gi|118576879|ref|YP_876622.1|	-	0.043	13.4	0.0	0.1	12.2	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1590)
FAD_binding_2	PF00890.19	gi|118576880|ref|YP_876623.1|	-	1e-42	146.4	0.1	1.3e-42	146.0	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|118576880|ref|YP_876623.1|	-	1.3e-36	125.2	0.9	1.9e-36	124.7	0.6	1.2	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
FAD_binding_2	PF00890.19	gi|118576881|ref|YP_876624.1|	-	1.1e-24	87.1	0.2	1.2e-24	86.9	0.2	1.0	1	0	0	1	1	1	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|118576881|ref|YP_876624.1|	-	0.0022	17.0	0.1	0.0031	16.4	0.1	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox_2	PF07992.9	gi|118576881|ref|YP_876624.1|	-	0.0026	17.6	0.1	0.0032	17.3	0.0	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|118576881|ref|YP_876624.1|	-	0.0057	15.7	0.3	0.0067	15.5	0.2	1.2	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|118576881|ref|YP_876624.1|	-	0.035	13.0	0.3	0.035	13.0	0.2	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|118576881|ref|YP_876624.1|	-	0.056	12.2	0.4	0.073	11.9	0.3	1.1	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
HXXSHH	PF07586.6	gi|118576882|ref|YP_876625.1|	-	0.083	11.8	0.8	0.12	11.2	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1552)
PadR	PF03551.9	gi|118576883|ref|YP_876626.1|	-	2e-09	37.1	0.0	4.1e-09	36.0	0.0	1.6	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|118576883|ref|YP_876626.1|	-	0.0011	18.7	0.0	0.0026	17.5	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
PEP_mutase	PF13714.1	gi|118576885|ref|YP_876628.1|	-	6.3e-54	182.7	1.0	7.7e-54	182.4	0.7	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|118576885|ref|YP_876628.1|	-	7.5e-16	57.4	0.0	1.1e-15	56.8	0.0	1.1	1	0	0	1	1	1	1	Isocitrate	lyase	family
Alba	PF01918.16	gi|118576886|ref|YP_876629.1|	-	3.3e-11	42.6	0.1	4.5e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|118576886|ref|YP_876629.1|	-	0.029	14.0	0.4	0.43	10.2	0.0	2.1	1	1	1	2	2	2	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Waikav_capsid_1	PF12264.3	gi|118576886|ref|YP_876629.1|	-	0.07	12.4	0.0	0.08	12.2	0.0	1.2	1	0	0	1	1	1	0	Waikavirus	capsid	protein	1
T-box	PF00907.17	gi|118576887|ref|YP_876630.1|	-	0.099	12.1	0.0	0.11	11.9	0.0	1.1	1	0	0	1	1	1	0	T-box
NAD_binding_1	PF00175.16	gi|118576888|ref|YP_876631.1|	-	3.3e-12	46.9	0.0	6.6e-12	45.9	0.0	1.5	1	1	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.19	gi|118576888|ref|YP_876631.1|	-	7.3e-09	35.6	0.0	1.1e-08	35.1	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.7	gi|118576888|ref|YP_876631.1|	-	0.14	12.0	0.0	0.32	10.8	0.0	1.6	2	0	0	2	2	2	0	Ferric	reductase	NAD	binding	domain
Aminotran_4	PF01063.14	gi|118576890|ref|YP_876633.1|	-	1.8e-37	129.0	0.0	2.3e-37	128.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	IV
GFO_IDH_MocA	PF01408.17	gi|118576891|ref|YP_876634.1|	-	5.8e-26	91.3	0.0	9.7e-26	90.6	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|118576891|ref|YP_876634.1|	-	1.1e-08	34.8	0.0	2.5e-08	33.6	0.0	1.7	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_3	PF03447.11	gi|118576891|ref|YP_876634.1|	-	0.00039	20.8	0.1	0.00063	20.1	0.0	1.3	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|118576891|ref|YP_876634.1|	-	0.0017	18.6	0.1	0.0032	17.7	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
CoA_binding	PF02629.14	gi|118576891|ref|YP_876634.1|	-	0.008	16.6	0.0	0.016	15.7	0.0	1.6	1	0	0	1	1	1	1	CoA	binding	domain
Aminoglyc_resit	PF10706.4	gi|118576891|ref|YP_876634.1|	-	0.11	12.0	0.0	0.25	10.9	0.0	1.6	2	0	0	2	2	2	0	Aminoglycoside-2''-adenylyltransferase
F420_oxidored	PF03807.12	gi|118576891|ref|YP_876634.1|	-	0.12	12.8	0.1	0.42	11.0	0.0	1.9	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Trm112p	PF03966.11	gi|118576892|ref|YP_876635.1|	-	1.1e-08	35.2	0.9	6.9e-08	32.7	0.6	2.1	1	1	0	1	1	1	1	Trm112p-like	protein
Hexapep	PF00132.19	gi|118576893|ref|YP_876636.1|	-	1.2e-23	81.4	15.3	1e-08	34.2	0.3	3.6	4	0	0	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|118576893|ref|YP_876636.1|	-	2.9e-13	49.1	12.2	5.4e-06	25.8	2.3	4.4	2	1	2	4	4	4	4	Hexapeptide	repeat	of	succinyl-transferase
Glycos_transf_4	PF00953.16	gi|118576894|ref|YP_876637.1|	-	2e-27	95.9	10.3	4.6e-27	94.7	7.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	4
DEAD	PF00270.24	gi|118576895|ref|YP_876638.1|	-	9.2e-29	100.0	0.0	1.4e-28	99.4	0.0	1.3	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|118576895|ref|YP_876638.1|	-	1e-10	41.3	0.0	1.8e-10	40.4	0.0	1.4	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.1	gi|118576895|ref|YP_876638.1|	-	1.7e-09	37.6	2.4	2.2e-09	37.3	0.1	2.5	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
ResIII	PF04851.10	gi|118576895|ref|YP_876638.1|	-	0.00047	20.0	0.0	0.00089	19.1	0.0	1.4	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_2	PF12826.2	gi|118576895|ref|YP_876638.1|	-	0.032	14.1	0.0	0.52	10.2	0.0	2.7	2	1	0	2	2	2	0	Helix-hairpin-helix	motif
Sec63	PF02889.11	gi|118576895|ref|YP_876638.1|	-	0.17	11.0	0.0	0.34	10.0	0.0	1.5	1	1	0	1	1	1	0	Sec63	Brl	domain
AAA_19	PF13245.1	gi|118576895|ref|YP_876638.1|	-	1.3	8.8	6.2	0.29	10.9	0.4	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
MCM	PF00493.18	gi|118576896|ref|YP_876639.1|	-	8.7e-123	409.3	0.0	1.1e-122	408.9	0.0	1.1	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|118576896|ref|YP_876639.1|	-	1.3e-14	54.7	0.0	4.4e-14	53.0	0.0	1.9	1	0	0	1	1	1	1	MCM	N-terminal	domain
Mg_chelatase	PF01078.16	gi|118576896|ref|YP_876639.1|	-	7.2e-07	28.5	0.1	7.5e-05	21.9	0.0	2.7	2	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|118576896|ref|YP_876639.1|	-	3.1e-06	26.9	0.0	5.9e-05	22.8	0.0	2.5	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|118576896|ref|YP_876639.1|	-	0.0014	18.2	0.0	0.0038	16.8	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sld5	PF05916.6	gi|118576897|ref|YP_876640.1|	-	6e-08	32.9	0.3	8.1e-08	32.5	0.2	1.1	1	0	0	1	1	1	1	GINS	complex	protein
DoxA	PF07680.6	gi|118576897|ref|YP_876640.1|	-	0.11	12.1	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	TQO	small	subunit	DoxA
DNA_pol3_delta2	PF13177.1	gi|118576898|ref|YP_876641.1|	-	4.2e-16	59.0	0.6	4.2e-14	52.5	0.4	2.2	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA	PF00004.24	gi|118576898|ref|YP_876641.1|	-	3.8e-13	49.7	0.1	8.3e-13	48.6	0.1	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rep_fac_C	PF08542.6	gi|118576898|ref|YP_876641.1|	-	6.4e-11	42.0	0.0	1.8e-10	40.6	0.0	1.8	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
Rad17	PF03215.10	gi|118576898|ref|YP_876641.1|	-	1.1e-10	40.8	0.2	1.3e-05	24.1	0.0	2.2	1	1	1	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|118576898|ref|YP_876641.1|	-	3.3e-07	29.5	0.2	3.2e-06	26.3	0.1	2.1	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|118576898|ref|YP_876641.1|	-	1.7e-05	24.6	0.0	3.3e-05	23.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|118576898|ref|YP_876641.1|	-	5.1e-05	23.3	1.7	0.012	15.6	0.0	3.0	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|118576898|ref|YP_876641.1|	-	5.8e-05	23.2	0.9	0.37	10.9	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|118576898|ref|YP_876641.1|	-	0.00039	19.6	0.0	0.045	12.9	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DNA_pol3_delta	PF06144.8	gi|118576898|ref|YP_876641.1|	-	0.00065	19.2	0.1	0.0012	18.4	0.1	1.3	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
PhoH	PF02562.11	gi|118576898|ref|YP_876641.1|	-	0.004	16.4	0.2	1.8	7.7	0.0	2.3	2	0	0	2	2	2	2	PhoH-like	protein
AAA_10	PF12846.2	gi|118576898|ref|YP_876641.1|	-	0.0094	15.4	0.6	0.067	12.6	0.4	2.2	1	1	0	1	1	1	1	AAA-like	domain
AAA_19	PF13245.1	gi|118576898|ref|YP_876641.1|	-	0.0097	15.6	0.0	0.026	14.2	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
TIP49	PF06068.8	gi|118576898|ref|YP_876641.1|	-	0.016	13.9	3.2	2.2	6.9	0.1	2.9	1	1	1	2	2	2	0	TIP49	C-terminus
PTPlike_phytase	PF14566.1	gi|118576898|ref|YP_876641.1|	-	0.016	15.2	0.0	0.036	14.1	0.0	1.6	1	0	0	1	1	1	0	Inositol	hexakisphosphate
Sigma54_activ_2	PF14532.1	gi|118576898|ref|YP_876641.1|	-	0.016	15.2	0.0	0.051	13.6	0.0	1.8	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ResIII	PF04851.10	gi|118576898|ref|YP_876641.1|	-	0.023	14.5	0.2	0.12	12.1	0.1	2.1	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Sigma54_activat	PF00158.21	gi|118576898|ref|YP_876641.1|	-	0.031	13.7	0.0	6.7	6.1	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NB-ARC	PF00931.17	gi|118576898|ref|YP_876641.1|	-	0.033	13.0	0.1	0.17	10.6	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
AAA_18	PF13238.1	gi|118576898|ref|YP_876641.1|	-	0.062	13.6	0.1	0.14	12.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|118576898|ref|YP_876641.1|	-	0.083	12.3	0.6	2	7.9	0.0	2.3	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
Viral_helicase1	PF01443.13	gi|118576898|ref|YP_876641.1|	-	0.085	12.3	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_25	PF13481.1	gi|118576898|ref|YP_876641.1|	-	0.1	12.0	1.1	0.59	9.5	0.8	2.3	1	1	0	1	1	1	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|118576898|ref|YP_876641.1|	-	0.11	11.1	0.0	0.24	9.9	0.0	1.5	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Fer4_7	PF12838.2	gi|118576899|ref|YP_876642.1|	-	2.4e-11	43.8	1.8	6.1e-05	23.3	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|118576899|ref|YP_876642.1|	-	1.8e-09	36.7	9.4	1.3e-05	24.5	1.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|118576899|ref|YP_876642.1|	-	2e-09	37.0	2.6	5.8e-05	22.8	0.5	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|118576899|ref|YP_876642.1|	-	2.7e-09	36.8	17.1	2.1e-07	30.8	7.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|118576899|ref|YP_876642.1|	-	5.4e-08	33.0	3.1	1.3e-07	31.8	2.1	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|118576899|ref|YP_876642.1|	-	3.1e-07	30.1	4.4	0.0016	18.2	0.5	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|118576899|ref|YP_876642.1|	-	4.4e-07	30.0	9.1	1.4e-06	28.4	6.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|118576899|ref|YP_876642.1|	-	4.3e-06	26.6	8.6	0.019	15.2	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|118576899|ref|YP_876642.1|	-	6.2e-06	26.8	7.4	0.00022	21.9	0.6	2.4	2	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|118576899|ref|YP_876642.1|	-	1.2e-05	24.9	11.2	0.0022	17.7	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|118576899|ref|YP_876642.1|	-	4.1e-05	23.9	5.9	4.1e-05	23.9	4.1	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118576899|ref|YP_876642.1|	-	0.00029	20.5	10.9	0.006	16.4	1.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|118576899|ref|YP_876642.1|	-	0.001	19.4	15.2	0.064	13.8	4.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|118576899|ref|YP_876642.1|	-	0.0054	17.0	12.3	0.62	10.4	0.3	3.0	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Furin-like	PF00757.15	gi|118576899|ref|YP_876642.1|	-	0.012	15.2	4.3	0.016	14.8	3.0	1.2	1	0	0	1	1	1	0	Furin-like	cysteine	rich	region
Fer4_15	PF13459.1	gi|118576899|ref|YP_876642.1|	-	0.098	13.2	14.6	1.4	9.5	8.9	2.8	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|118576899|ref|YP_876642.1|	-	0.27	11.1	6.1	3.8	7.4	0.9	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|118576900|ref|YP_876643.1|	-	8.5e-11	42.0	26.4	8.2e-07	29.3	6.3	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|118576900|ref|YP_876643.1|	-	2.6e-10	39.4	11.9	2.1e-06	27.1	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|118576900|ref|YP_876643.1|	-	7.6e-09	35.7	5.0	2.2e-08	34.2	3.4	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|118576900|ref|YP_876643.1|	-	4.2e-08	33.0	22.7	2.8e-05	24.0	5.3	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|118576900|ref|YP_876643.1|	-	1.4e-07	31.0	12.5	0.00063	19.4	2.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|118576900|ref|YP_876643.1|	-	1.5e-07	31.0	18.9	6.3e-06	25.8	5.9	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|118576900|ref|YP_876643.1|	-	7.2e-07	28.7	11.4	0.0035	17.1	1.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|118576900|ref|YP_876643.1|	-	3.8e-06	27.5	5.1	0.0024	18.5	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|118576900|ref|YP_876643.1|	-	6.4e-06	25.9	7.6	0.00057	19.6	5.4	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|118576900|ref|YP_876643.1|	-	9.9e-06	25.4	6.1	0.029	14.6	1.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|118576900|ref|YP_876643.1|	-	3.5e-05	24.2	11.7	0.0026	18.2	1.6	2.8	3	1	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|118576900|ref|YP_876643.1|	-	3.7e-05	23.9	4.7	0.0028	17.9	4.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|118576900|ref|YP_876643.1|	-	5.4e-05	23.5	9.2	0.0088	16.4	0.5	2.8	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|118576900|ref|YP_876643.1|	-	0.00011	22.4	9.0	0.00087	19.6	4.8	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|118576900|ref|YP_876643.1|	-	0.0049	16.7	1.1	2.7	7.9	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|118576900|ref|YP_876643.1|	-	0.024	15.2	15.4	0.11	13.0	0.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
eIF-6	PF01912.13	gi|118576901|ref|YP_876644.1|	-	1.5e-63	213.4	0.1	1.8e-63	213.2	0.1	1.0	1	0	0	1	1	1	1	eIF-6	family
TAF	PF02969.12	gi|118576901|ref|YP_876644.1|	-	0.099	12.6	0.1	0.79	9.7	0.0	2.1	2	0	0	2	2	2	0	TATA	box	binding	protein	associated	factor	(TAF)
tRNA-synt_His	PF13393.1	gi|118576902|ref|YP_876645.1|	-	1.7e-43	148.8	0.0	2.2e-43	148.4	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|118576902|ref|YP_876645.1|	-	3.9e-15	55.8	0.0	5.6e-15	55.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|118576902|ref|YP_876645.1|	-	2.5e-08	33.7	0.0	4.7e-08	32.8	0.0	1.4	1	0	0	1	1	1	1	Anticodon	binding	domain
M20_dimer	PF07687.9	gi|118576902|ref|YP_876645.1|	-	0.026	14.2	0.0	0.39	10.4	0.0	2.3	1	1	1	2	2	2	0	Peptidase	dimerisation	domain
DUF3892	PF13031.1	gi|118576904|ref|YP_876647.1|	-	2.9e-05	24.3	0.0	5e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3892)
DUF2508	PF10704.4	gi|118576904|ref|YP_876647.1|	-	0.058	13.5	0.3	1.3	9.2	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2508)
MscS_porin	PF12795.2	gi|118576904|ref|YP_876647.1|	-	0.13	11.5	7.2	0.28	10.4	5.0	1.5	1	1	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
Med9	PF07544.8	gi|118576904|ref|YP_876647.1|	-	0.23	11.2	2.6	0.31	10.7	0.8	1.9	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
CorA	PF01544.13	gi|118576904|ref|YP_876647.1|	-	0.27	10.2	0.7	0.4	9.6	0.5	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Ribosomal_L29	PF00831.18	gi|118576904|ref|YP_876647.1|	-	0.39	10.4	6.5	0.23	11.1	0.7	2.5	2	1	0	2	2	2	0	Ribosomal	L29	protein
Myb_DNA-binding	PF00249.26	gi|118576905|ref|YP_876648.1|	-	0.048	13.7	0.5	0.89	9.6	0.0	2.3	2	0	0	2	2	2	0	Myb-like	DNA-binding	domain
DUF2332	PF10094.4	gi|118576905|ref|YP_876648.1|	-	0.058	12.3	0.0	0.07	12.0	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2332)
He_PIG	PF05345.7	gi|118576906|ref|YP_876649.1|	-	0.00039	20.3	0.2	0.039	13.9	0.0	2.6	2	0	0	2	2	2	2	Putative	Ig	domain
UbiD	PF01977.11	gi|118576907|ref|YP_876650.1|	-	7.4e-108	360.6	0.1	8.4e-108	360.4	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Trm56	PF01994.11	gi|118576909|ref|YP_876652.1|	-	1.4e-45	153.8	0.0	1.9e-45	153.5	0.0	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
MMR_HSR1	PF01926.18	gi|118576910|ref|YP_876653.1|	-	3.5e-15	55.9	0.0	8.4e-15	54.7	0.0	1.6	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|118576910|ref|YP_876653.1|	-	8.6e-07	28.3	0.0	1.6e-06	27.4	0.0	1.4	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|118576910|ref|YP_876653.1|	-	1e-05	25.0	0.0	0.0062	15.9	0.0	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
GTP-bdg_N	PF13167.1	gi|118576910|ref|YP_876653.1|	-	1.6e-05	24.9	0.0	3.9e-05	23.6	0.0	1.7	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
PduV-EutP	PF10662.4	gi|118576910|ref|YP_876653.1|	-	0.00046	19.7	0.0	0.01	15.3	0.0	2.6	1	1	1	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
Arf	PF00025.16	gi|118576910|ref|YP_876653.1|	-	0.0017	17.5	0.0	0.38	9.9	0.0	2.2	2	0	0	2	2	2	2	ADP-ribosylation	factor	family
cobW	PF02492.14	gi|118576910|ref|YP_876653.1|	-	0.0099	15.3	0.6	3.2	7.1	0.0	2.5	1	1	1	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
Miro	PF08477.8	gi|118576910|ref|YP_876653.1|	-	0.01	16.3	0.0	0.032	14.7	0.0	1.9	1	0	0	1	1	1	0	Miro-like	protein
SRPRB	PF09439.5	gi|118576910|ref|YP_876653.1|	-	0.019	14.2	0.0	0.031	13.4	0.0	1.4	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
T2SE	PF00437.15	gi|118576910|ref|YP_876653.1|	-	0.027	13.3	0.0	0.23	10.3	0.0	2.1	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|118576910|ref|YP_876653.1|	-	0.035	13.8	0.0	0.065	12.9	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Dynamin_N	PF00350.18	gi|118576910|ref|YP_876653.1|	-	0.097	12.4	0.0	0.95	9.2	0.0	2.2	1	1	1	2	2	2	0	Dynamin	family
PhoU	PF01895.14	gi|118576911|ref|YP_876654.1|	-	2.6e-27	95.0	8.5	1e-17	64.3	1.8	2.4	2	0	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|118576911|ref|YP_876654.1|	-	1.9e-08	33.8	0.1	1.7e-07	30.8	0.0	2.4	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
MCPsignal	PF00015.16	gi|118576911|ref|YP_876654.1|	-	0.0046	16.5	1.1	0.0093	15.5	0.7	1.4	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
TGT_C2	PF14810.1	gi|118576913|ref|YP_876656.1|	-	1.4e-07	31.1	0.1	2.2e-07	30.6	0.1	1.3	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|118576913|ref|YP_876656.1|	-	1.7e-06	27.6	0.3	5.4e-06	26.0	0.2	1.8	2	1	0	2	2	2	1	PUA	domain
NAC	PF01849.13	gi|118576914|ref|YP_876657.1|	-	4.3e-14	51.7	1.9	6.4e-14	51.2	0.9	1.6	2	0	0	2	2	2	1	NAC	domain
UBA	PF00627.26	gi|118576914|ref|YP_876657.1|	-	2.3e-06	27.2	3.8	3.5e-06	26.6	0.1	2.2	2	0	0	2	2	2	1	UBA/TS-N	domain
Gpi16	PF04113.9	gi|118576914|ref|YP_876657.1|	-	0.023	12.7	0.0	0.025	12.6	0.0	1.0	1	0	0	1	1	1	0	Gpi16	subunit,	GPI	transamidase	component
UBA_4	PF14555.1	gi|118576914|ref|YP_876657.1|	-	0.041	13.4	0.1	0.059	12.9	0.0	1.3	1	0	0	1	1	1	0	UBA-like	domain
SPT6_acidic	PF14632.1	gi|118576914|ref|YP_876657.1|	-	0.096	12.8	0.6	0.15	12.2	0.1	1.5	2	0	0	2	2	2	0	Acidic	N-terminal	SPT6
CHASE3	PF05227.8	gi|118576915|ref|YP_876658.1|	-	0.0007	19.2	2.4	0.0009	18.9	1.6	1.2	1	0	0	1	1	1	1	CHASE3	domain
ATP-synt_B	PF00430.13	gi|118576915|ref|YP_876658.1|	-	0.00078	19.2	6.8	0.0013	18.5	4.7	1.4	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
DivIVA	PF05103.8	gi|118576915|ref|YP_876658.1|	-	0.0012	18.8	3.5	0.0018	18.3	2.4	1.2	1	0	0	1	1	1	1	DivIVA	protein
Mitofilin	PF09731.4	gi|118576915|ref|YP_876658.1|	-	0.0024	16.5	2.6	0.0028	16.3	1.8	1.0	1	0	0	1	1	1	1	Mitochondrial	inner	membrane	protein
Peptidase_M75	PF09375.5	gi|118576915|ref|YP_876658.1|	-	0.0052	16.1	2.4	0.0063	15.8	1.5	1.3	1	1	0	1	1	1	1	Imelysin
OmpH	PF03938.9	gi|118576915|ref|YP_876658.1|	-	0.0055	16.6	1.6	0.0066	16.4	1.1	1.1	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
CCDC66	PF15236.1	gi|118576915|ref|YP_876658.1|	-	0.021	14.4	4.9	0.025	14.2	3.4	1.1	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	66
Apolipoprotein	PF01442.13	gi|118576915|ref|YP_876658.1|	-	0.027	13.9	1.4	0.04	13.4	0.9	1.3	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
TBPIP	PF07106.8	gi|118576915|ref|YP_876658.1|	-	0.037	13.5	0.8	0.047	13.2	0.6	1.2	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
RapA_C	PF12137.3	gi|118576915|ref|YP_876658.1|	-	0.041	12.7	0.4	0.042	12.6	0.3	1.2	1	0	0	1	1	1	0	RNA	polymerase	recycling	family	C-terminal
DUF883	PF05957.8	gi|118576915|ref|YP_876658.1|	-	0.042	14.2	8.3	0.25	11.7	0.9	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
FlxA	PF14282.1	gi|118576915|ref|YP_876658.1|	-	0.046	13.6	2.2	0.061	13.2	1.6	1.3	1	0	0	1	1	1	0	FlxA-like	protein
DUF972	PF06156.8	gi|118576915|ref|YP_876658.1|	-	0.048	14.0	1.3	0.066	13.5	0.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Baculo_PEP_C	PF04513.7	gi|118576915|ref|YP_876658.1|	-	0.081	12.7	0.3	1.3	8.8	0.0	2.2	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
LPP	PF04728.8	gi|118576915|ref|YP_876658.1|	-	0.089	12.5	2.3	0.13	12.0	0.6	2.1	1	1	1	2	2	2	0	Lipoprotein	leucine-zipper
Spore_III_AF	PF09581.5	gi|118576915|ref|YP_876658.1|	-	0.12	12.2	2.1	0.12	12.1	1.5	1.1	1	0	0	1	1	1	0	Stage	III	sporulation	protein	AF	(Spore_III_AF)
Phasin	PF05597.6	gi|118576915|ref|YP_876658.1|	-	0.12	12.0	5.2	1.5	8.5	0.8	2.2	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
TMCO5	PF14992.1	gi|118576915|ref|YP_876658.1|	-	0.14	11.3	2.8	0.16	11.0	1.9	1.0	1	0	0	1	1	1	0	TMCO5	family
DUF2317	PF10079.4	gi|118576915|ref|YP_876658.1|	-	0.14	10.7	1.9	0.19	10.3	0.8	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2317)
DUF2894	PF11445.3	gi|118576915|ref|YP_876658.1|	-	0.32	11.2	2.3	0.38	10.9	1.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2894)
DUF3154	PF11351.3	gi|118576915|ref|YP_876658.1|	-	0.36	10.6	2.5	0.47	10.2	0.4	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3154)
SBP_bac_7	PF03480.8	gi|118576915|ref|YP_876658.1|	-	0.37	9.8	2.5	0.47	9.4	1.8	1.1	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein,	family	7
SlyX	PF04102.7	gi|118576915|ref|YP_876658.1|	-	0.38	11.1	1.8	0.79	10.1	0.9	1.8	1	1	1	2	2	2	0	SlyX
DUF3209	PF11483.3	gi|118576915|ref|YP_876658.1|	-	0.53	10.6	4.3	0.97	9.7	2.8	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3209)
HSCB_C	PF07743.8	gi|118576915|ref|YP_876658.1|	-	0.84	10.1	9.3	2.4	8.6	1.6	2.2	1	1	1	2	2	2	0	HSCB	C-terminal	oligomerisation	domain
KfrA_N	PF11740.3	gi|118576915|ref|YP_876658.1|	-	2.4	8.6	10.7	3.6	8.0	7.1	1.5	1	1	1	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
DUF460	PF04312.8	gi|118576916|ref|YP_876659.1|	-	0.0017	17.8	0.1	0.0026	17.2	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
PIN_3	PF13470.1	gi|118576918|ref|YP_876661.1|	-	0.0084	16.7	0.0	0.0093	16.6	0.0	1.3	1	0	0	1	1	1	1	PIN	domain
Arena_nucleocap	PF00843.12	gi|118576918|ref|YP_876661.1|	-	0.078	10.8	0.0	0.084	10.7	0.0	1.1	1	0	0	1	1	1	0	Arenavirus	nucleocapsid	protein
PIN	PF01850.16	gi|118576918|ref|YP_876661.1|	-	0.11	12.7	0.7	0.84	9.9	0.5	2.0	1	1	0	1	1	1	0	PIN	domain
AvrRpt-cleavage	PF05627.6	gi|118576918|ref|YP_876661.1|	-	0.12	11.4	0.3	0.3	10.1	0.2	1.6	2	0	0	2	2	2	0	Cleavage	site	for	pathogenic	type	III	effector	avirulence	factor	Avr
H_kinase_N	PF12282.3	gi|118576920|ref|YP_876663.1|	-	0.022	14.4	1.5	32	4.1	0.0	5.1	3	2	4	7	7	7	0	Signal	transduction	histidine	kinase
ADH_zinc_N	PF00107.21	gi|118576923|ref|YP_876666.1|	-	2.4e-29	101.4	0.0	4.4e-29	100.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|118576923|ref|YP_876666.1|	-	7.2e-22	77.2	0.1	1.2e-21	76.5	0.0	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|118576923|ref|YP_876666.1|	-	4e-15	56.8	0.1	6.9e-15	56.0	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ACP_syn_III_C	PF08541.5	gi|118576923|ref|YP_876666.1|	-	0.01	15.8	0.2	0.026	14.5	0.0	1.9	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HpcH_HpaI	PF03328.9	gi|118576924|ref|YP_876667.1|	-	1.8e-47	161.0	0.0	2.3e-47	160.7	0.0	1.1	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|118576924|ref|YP_876667.1|	-	9.1e-08	31.2	0.0	0.00022	20.1	0.0	2.4	1	1	0	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
DUF4442	PF14539.1	gi|118576924|ref|YP_876667.1|	-	0.11	12.5	0.0	0.22	11.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4442)
TPR_11	PF13414.1	gi|118576925|ref|YP_876668.1|	-	1.3e-17	63.1	10.2	3e-06	26.7	0.2	3.5	1	1	4	5	5	5	5	TPR	repeat
TPR_2	PF07719.12	gi|118576925|ref|YP_876668.1|	-	1.6e-14	52.5	5.1	0.00062	19.5	0.0	4.9	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118576925|ref|YP_876668.1|	-	4e-13	48.3	1.9	6.1e-05	22.4	0.0	4.2	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118576925|ref|YP_876668.1|	-	2.1e-11	44.1	5.1	1.2e-06	29.0	0.2	3.2	2	1	1	3	3	3	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118576925|ref|YP_876668.1|	-	5.1e-09	35.2	6.1	0.002	17.7	0.1	5.2	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118576925|ref|YP_876668.1|	-	6.8e-09	35.2	4.1	0.22	11.8	0.1	4.3	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118576925|ref|YP_876668.1|	-	4.8e-08	33.2	8.0	0.00064	20.0	0.0	3.2	2	1	2	4	4	4	3	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|118576925|ref|YP_876668.1|	-	8.9e-08	31.8	6.1	0.043	13.7	0.0	4.3	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118576925|ref|YP_876668.1|	-	1.3e-07	31.5	9.1	0.41	11.4	0.0	5.1	2	2	3	5	5	5	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118576925|ref|YP_876668.1|	-	1.7e-07	31.0	4.3	0.057	13.3	0.0	3.7	2	1	2	4	4	4	3	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|118576925|ref|YP_876668.1|	-	2.8e-07	30.2	5.7	0.0026	17.5	0.0	5.0	3	2	3	6	6	6	1	Fis1	C-terminal	tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118576925|ref|YP_876668.1|	-	4.3e-07	29.2	5.4	0.16	11.8	0.0	4.4	2	1	2	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|118576925|ref|YP_876668.1|	-	6.1e-07	29.4	2.7	0.015	15.4	0.0	2.7	3	1	0	3	3	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.1	gi|118576925|ref|YP_876668.1|	-	0.00011	21.9	4.9	0.0068	16.2	0.1	3.0	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118576925|ref|YP_876668.1|	-	0.00026	21.2	6.9	3.8	8.1	0.2	4.1	4	0	0	4	4	4	2	Tetratricopeptide	repeat
PPTA	PF01239.17	gi|118576925|ref|YP_876668.1|	-	0.041	13.2	0.0	24	4.4	0.0	3.4	3	0	0	3	3	3	0	Protein	prenyltransferase	alpha	subunit	repeat
BTAD	PF03704.12	gi|118576925|ref|YP_876668.1|	-	0.048	13.9	2.0	1.1	9.5	0.4	2.3	2	0	0	2	2	2	0	Bacterial	transcriptional	activator	domain
TPR_20	PF14561.1	gi|118576925|ref|YP_876668.1|	-	0.13	12.4	6.1	1.3	9.1	0.0	3.1	2	1	1	3	3	3	0	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.1	gi|118576925|ref|YP_876668.1|	-	0.23	11.6	1.8	1	9.5	0.5	2.3	2	1	1	3	3	3	0	Alkyl	sulfatase	dimerisation
TPR_4	PF07721.9	gi|118576925|ref|YP_876668.1|	-	1.2	9.7	5.6	8.6	7.1	0.1	4.2	5	0	0	5	5	4	0	Tetratricopeptide	repeat
Lum_binding	PF00677.12	gi|118576926|ref|YP_876669.1|	-	2.8e-44	148.9	1.2	5.9e-26	90.1	1.0	2.0	2	0	0	2	2	2	2	Lumazine	binding	domain
DHBP_synthase	PF00926.14	gi|118576927|ref|YP_876670.1|	-	4.4e-64	215.2	0.0	4.9e-64	215.1	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|118576928|ref|YP_876671.1|	-	8.2e-30	103.3	0.0	9.1e-30	103.2	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
GGDN	PF05165.7	gi|118576929|ref|YP_876672.1|	-	1.6e-22	79.7	0.0	2.1e-22	79.3	0.0	1.1	1	0	0	1	1	1	1	GGDN	family
Guanylate_cyc	PF00211.15	gi|118576929|ref|YP_876672.1|	-	0.0064	15.8	0.0	0.0089	15.4	0.0	1.3	1	0	0	1	1	1	1	Adenylate	and	Guanylate	cyclase	catalytic	domain
Amidohydro_1	PF01979.15	gi|118576930|ref|YP_876673.1|	-	3.1e-27	96.1	0.8	1.7e-26	93.7	0.5	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|118576930|ref|YP_876673.1|	-	4.2e-11	43.3	2.5	0.00016	21.8	0.1	2.6	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|118576930|ref|YP_876673.1|	-	1.2e-07	31.4	0.1	3.3e-07	30.0	0.1	1.8	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|118576930|ref|YP_876673.1|	-	1.4e-06	27.8	5.5	6.2e-06	25.6	0.6	2.4	1	1	1	2	2	2	2	Amidohydrolase	family
RibD_C	PF01872.12	gi|118576931|ref|YP_876674.1|	-	5.8e-47	159.8	0.1	6.5e-47	159.7	0.1	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
TFIIE_alpha	PF02002.12	gi|118576932|ref|YP_876675.1|	-	3.9e-19	68.0	0.7	3.9e-19	68.0	0.5	1.5	2	0	0	2	2	2	1	TFIIE	alpha	subunit
IBR	PF01485.16	gi|118576932|ref|YP_876675.1|	-	0.047	13.5	0.3	0.077	12.8	0.2	1.4	1	0	0	1	1	1	0	IBR	domain
D5_N	PF08706.6	gi|118576932|ref|YP_876675.1|	-	0.06	13.4	0.2	0.081	13.0	0.1	1.2	1	0	0	1	1	1	0	D5	N	terminal	like
TrmB	PF01978.14	gi|118576932|ref|YP_876675.1|	-	0.06	13.0	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Phe_tRNA-synt_N	PF02912.13	gi|118576932|ref|YP_876675.1|	-	0.068	12.8	2.8	0.87	9.3	0.2	3.0	3	0	0	3	3	3	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
Sigma70_r3	PF04539.11	gi|118576932|ref|YP_876675.1|	-	0.073	12.9	0.1	0.3	10.9	0.0	2.0	2	0	0	2	2	2	0	Sigma-70	region	3
zf-ribbon_3	PF13248.1	gi|118576932|ref|YP_876675.1|	-	0.22	10.7	1.5	0.23	10.7	0.1	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
Hemerythrin	PF01814.18	gi|118576933|ref|YP_876676.1|	-	2.7e-11	43.7	6.0	2.8e-11	43.7	0.3	2.4	1	1	0	2	2	2	1	Hemerythrin	HHE	cation	binding	domain
StbA	PF06406.6	gi|118576933|ref|YP_876676.1|	-	0.037	12.9	0.0	0.071	12.0	0.0	1.4	1	1	0	1	1	1	0	StbA	protein
Methyltransf_4	PF02390.12	gi|118576933|ref|YP_876676.1|	-	0.04	12.9	0.3	0.073	12.1	0.2	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
zf-ZPR1	PF03367.8	gi|118576933|ref|YP_876676.1|	-	0.059	12.5	0.1	0.12	11.5	0.0	1.5	1	0	0	1	1	1	0	ZPR1	zinc-finger	domain
dsDNA_bind	PF01984.15	gi|118576936|ref|YP_876679.1|	-	2.5e-25	88.5	1.8	3e-25	88.2	1.2	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
PCI	PF01399.22	gi|118576936|ref|YP_876679.1|	-	0.016	15.5	0.0	0.017	15.4	0.0	1.2	1	0	0	1	1	1	0	PCI	domain
YqeY	PF09424.5	gi|118576936|ref|YP_876679.1|	-	0.098	12.5	0.8	0.13	12.0	0.6	1.2	1	0	0	1	1	1	0	Yqey-like	protein
Ribosomal_S19e	PF01090.14	gi|118576937|ref|YP_876680.1|	-	3.7e-43	146.3	0.0	4.1e-43	146.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
Rpr2	PF04032.11	gi|118576938|ref|YP_876681.1|	-	1.8e-17	62.9	0.1	2.4e-17	62.5	0.1	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-Sec23_Sec24	PF04810.10	gi|118576938|ref|YP_876681.1|	-	0.014	14.8	2.7	0.12	11.9	1.8	2.0	1	1	0	1	1	1	0	Sec23/Sec24	zinc	finger
zinc_ribbon_4	PF13717.1	gi|118576938|ref|YP_876681.1|	-	0.2	11.4	1.6	1.3	8.8	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118576938|ref|YP_876681.1|	-	0.2	11.2	1.4	1.2	8.7	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
EMG1	PF03587.9	gi|118576939|ref|YP_876682.1|	-	1.2e-46	158.5	0.0	1.4e-46	158.3	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Glyco_hydro_42	PF02449.10	gi|118576940|ref|YP_876683.1|	-	9.4e-05	21.6	0.0	0.00017	20.8	0.0	1.3	1	0	0	1	1	1	1	Beta-galactosidase
Glyco_hydro_35	PF01301.14	gi|118576940|ref|YP_876683.1|	-	0.0018	17.6	0.0	0.0027	17.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	35
Ribonuc_red_lgC	PF02867.10	gi|118576941|ref|YP_876684.1|	-	7.8e-152	506.5	0.0	3.2e-151	504.5	0.0	1.8	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|118576941|ref|YP_876684.1|	-	4.2e-29	100.1	0.0	1.5e-28	98.4	0.0	2.0	2	0	0	2	2	2	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|118576941|ref|YP_876684.1|	-	1.6e-26	92.5	0.2	7.7e-26	90.3	0.1	2.2	2	0	0	2	2	2	1	ATP	cone	domain
RNA_POL_M_15KD	PF02150.11	gi|118576941|ref|YP_876684.1|	-	0.22	11.2	2.4	0.55	9.9	1.7	1.6	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
NRDD	PF13597.1	gi|118576942|ref|YP_876685.1|	-	7.3e-14	50.7	0.0	8.5e-14	50.5	0.0	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
HpaB	PF03241.8	gi|118576942|ref|YP_876685.1|	-	0.095	11.5	0.0	0.14	10.9	0.0	1.2	1	0	0	1	1	1	0	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
HTH_20	PF12840.2	gi|118576943|ref|YP_876686.1|	-	2.7e-10	39.8	0.1	1.3e-09	37.6	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
ATP-cone	PF03477.11	gi|118576943|ref|YP_876686.1|	-	1.7e-07	31.5	0.0	4.1e-07	30.3	0.0	1.6	1	0	0	1	1	1	1	ATP	cone	domain
NRDD	PF13597.1	gi|118576943|ref|YP_876686.1|	-	0.01	13.9	0.0	0.51	8.3	0.0	2.3	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
DUF4364	PF14277.1	gi|118576943|ref|YP_876686.1|	-	0.13	11.9	1.3	0.26	10.8	0.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4364)
DUF3071	PF11268.3	gi|118576943|ref|YP_876686.1|	-	0.19	11.4	0.2	0.47	10.1	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3071)
zf-C4_Topoisom	PF01396.14	gi|118576945|ref|YP_876688.1|	-	0.098	12.1	0.3	0.14	11.7	0.2	1.2	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
Tsp45I	PF06300.7	gi|118576946|ref|YP_876689.1|	-	0.0013	18.2	0.0	0.0014	18.1	0.0	1.1	1	0	0	1	1	1	1	Tsp45I	type	II	restriction	enzyme
DUF1289	PF06945.8	gi|118576946|ref|YP_876689.1|	-	0.11	11.9	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1289)
Methyltransf_26	PF13659.1	gi|118576947|ref|YP_876690.1|	-	0.0082	16.1	0.0	0.17	11.9	0.0	2.3	1	1	0	1	1	1	1	Methyltransferase	domain
Eco57I	PF07669.6	gi|118576947|ref|YP_876690.1|	-	0.014	15.7	0.0	0.026	14.8	0.0	1.4	1	0	0	1	1	1	0	Eco57I	restriction-modification	methylase
N6_Mtase	PF02384.11	gi|118576947|ref|YP_876690.1|	-	0.029	13.4	0.0	1.1	8.3	0.0	2.5	3	0	0	3	3	3	0	N-6	DNA	Methylase
TSP_3	PF02412.13	gi|118576948|ref|YP_876691.1|	-	8.7e-25	85.9	283.5	0.00023	20.5	0.5	29.8	29	10	2	31	31	31	22	Thrombospondin	type	3	repeat
ChitinaseA_N	PF08329.5	gi|118576948|ref|YP_876691.1|	-	0.34	10.6	3.0	47	3.7	0.1	3.8	3	0	0	3	3	3	0	Chitinase	A,	N-terminal	domain
zf-ribbon_3	PF13248.1	gi|118576949|ref|YP_876692.1|	-	0.00027	20.0	1.0	0.12	11.6	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118576949|ref|YP_876692.1|	-	0.00043	19.6	1.8	0.036	13.5	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|118576949|ref|YP_876692.1|	-	0.0032	17.2	1.1	0.0065	16.2	0.8	1.5	1	1	0	1	1	1	1	Double	zinc	ribbon
DiS_P_DiS	PF06750.8	gi|118576949|ref|YP_876692.1|	-	0.0072	16.1	0.4	0.0098	15.6	0.3	1.3	1	1	0	1	1	1	1	Bacterial	Peptidase	A24	N-terminal	domain
zf-DNA_Pol	PF08996.5	gi|118576949|ref|YP_876692.1|	-	0.0083	15.4	0.1	0.0083	15.4	0.1	1.0	1	0	0	1	1	1	1	DNA	Polymerase	alpha	zinc	finger
Zn-ribbon_8	PF09723.5	gi|118576949|ref|YP_876692.1|	-	0.01	15.7	1.9	0.089	12.7	1.3	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|118576949|ref|YP_876692.1|	-	0.011	15.2	2.0	1.1	8.8	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-IS66	PF13005.2	gi|118576949|ref|YP_876692.1|	-	0.017	15.1	0.3	0.29	11.1	0.0	2.1	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-LITAF-like	PF10601.4	gi|118576949|ref|YP_876692.1|	-	0.017	14.9	0.8	0.67	9.8	0.0	2.1	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
zf-NADH-PPase	PF09297.6	gi|118576949|ref|YP_876692.1|	-	0.02	14.4	3.5	1.7	8.2	0.2	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|118576949|ref|YP_876692.1|	-	0.02	14.5	1.9	1.9	8.2	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Chordopox_RPO7	PF05864.7	gi|118576949|ref|YP_876692.1|	-	0.025	14.6	0.7	2.5	8.2	0.0	2.2	1	1	1	2	2	2	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Prok-RING_1	PF14446.1	gi|118576949|ref|YP_876692.1|	-	0.026	14.2	0.2	1.5	8.5	0.0	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-C4_Topoisom	PF01396.14	gi|118576949|ref|YP_876692.1|	-	0.027	13.9	1.1	0.58	9.7	0.1	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-ISL3	PF14690.1	gi|118576949|ref|YP_876692.1|	-	0.027	14.4	1.3	3.2	7.8	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HypA	PF01155.14	gi|118576949|ref|YP_876692.1|	-	0.03	14.0	0.3	0.039	13.6	0.2	1.3	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Sgf11	PF08209.6	gi|118576949|ref|YP_876692.1|	-	0.051	12.9	0.9	1.6	8.1	0.0	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Lar_restr_allev	PF14354.1	gi|118576949|ref|YP_876692.1|	-	0.055	13.7	1.6	0.18	12.1	1.1	1.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-Di19	PF05605.7	gi|118576949|ref|YP_876692.1|	-	0.066	13.3	0.1	0.57	10.3	0.1	1.9	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF4428	PF14471.1	gi|118576949|ref|YP_876692.1|	-	0.09	12.5	1.0	6	6.6	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zf-HYPF	PF07503.7	gi|118576949|ref|YP_876692.1|	-	0.09	12.2	0.9	7.4	6.0	0.0	2.1	2	0	0	2	2	2	0	HypF	finger
DUF329	PF03884.9	gi|118576949|ref|YP_876692.1|	-	0.096	12.2	0.8	4.1	7.0	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
NOB1_Zn_bind	PF08772.6	gi|118576949|ref|YP_876692.1|	-	0.1	12.4	0.8	7.1	6.5	0.0	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
LIM	PF00412.17	gi|118576949|ref|YP_876692.1|	-	0.12	12.4	0.1	0.41	10.7	0.1	1.8	1	1	0	1	1	1	0	LIM	domain
DUF983	PF06170.7	gi|118576949|ref|YP_876692.1|	-	0.12	12.4	0.1	11	6.1	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF983)
Zn_Tnp_IS1595	PF12760.2	gi|118576949|ref|YP_876692.1|	-	0.13	12.0	2.2	3.2	7.6	0.2	2.0	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
FANCL_C	PF11793.3	gi|118576949|ref|YP_876692.1|	-	0.14	12.1	0.8	0.41	10.6	0.1	1.8	1	1	1	2	2	2	0	FANCL	C-terminal	domain
Zn_Tnp_IS1	PF03811.8	gi|118576949|ref|YP_876692.1|	-	0.16	11.5	1.6	7.6	6.1	0.0	2.1	2	0	0	2	2	2	0	InsA	N-terminal	domain
zf-C2HC5	PF06221.8	gi|118576949|ref|YP_876692.1|	-	0.19	11.5	1.9	0.87	9.3	1.3	1.9	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DNA_RNApol_7kD	PF03604.8	gi|118576949|ref|YP_876692.1|	-	0.19	11.2	3.8	7.5	6.1	2.6	2.2	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
YhfH	PF14149.1	gi|118576949|ref|YP_876692.1|	-	0.2	11.4	1.9	12	5.7	0.0	2.3	2	0	0	2	2	2	0	YhfH-like	protein
zf-C3HC4_3	PF13920.1	gi|118576949|ref|YP_876692.1|	-	0.21	11.2	1.1	0.38	10.4	0.7	1.4	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF2688	PF10892.3	gi|118576949|ref|YP_876692.1|	-	0.27	10.9	2.4	1.3	8.7	1.7	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2688)
Nudix_N_2	PF14803.1	gi|118576949|ref|YP_876692.1|	-	0.27	10.9	1.9	4.3	7.0	0.2	2.1	2	0	0	2	2	2	0	Nudix	N-terminal
TF_Zn_Ribbon	PF08271.7	gi|118576949|ref|YP_876692.1|	-	0.44	9.8	4.2	3.1	7.2	0.1	2.3	2	1	0	2	2	2	0	TFIIB	zinc-binding
zf-dskA_traR	PF01258.12	gi|118576949|ref|YP_876692.1|	-	0.56	9.9	6.1	7	6.5	4.2	2.0	1	1	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zf-CSL	PF05207.8	gi|118576949|ref|YP_876692.1|	-	0.63	9.6	2.9	3.2	7.3	1.9	1.9	1	1	1	2	2	2	0	CSL	zinc	finger
Zn_ribbon_recom	PF13408.1	gi|118576949|ref|YP_876692.1|	-	1.5	9.1	3.9	49	4.2	3.3	2.0	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DUF35	PF01796.12	gi|118576950|ref|YP_876693.1|	-	3.6e-10	39.9	0.2	5.9e-10	39.2	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|118576950|ref|YP_876693.1|	-	5.7e-07	29.2	2.2	9.2e-07	28.5	1.5	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_2	PF13240.1	gi|118576950|ref|YP_876693.1|	-	0.013	14.9	1.4	0.021	14.2	1.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|118576950|ref|YP_876693.1|	-	0.04	13.6	3.9	1.4	8.6	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
DZR	PF12773.2	gi|118576950|ref|YP_876693.1|	-	0.048	13.4	0.5	0.073	12.8	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|118576950|ref|YP_876693.1|	-	0.07	12.9	1.7	0.1	12.4	1.2	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
GFA	PF04828.9	gi|118576950|ref|YP_876693.1|	-	0.087	12.7	1.4	0.36	10.7	1.0	1.9	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-CCHC_4	PF14392.1	gi|118576950|ref|YP_876693.1|	-	0.3	10.7	3.6	9.2	6.0	0.1	2.2	2	0	0	2	2	2	0	Zinc	knuckle
zf-ribbon_3	PF13248.1	gi|118576950|ref|YP_876693.1|	-	0.68	9.2	3.8	2.2	7.5	2.7	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
Ribosomal_L37e	PF01907.14	gi|118576950|ref|YP_876693.1|	-	1.8	8.3	6.4	30	4.5	0.4	2.2	1	1	1	2	2	2	0	Ribosomal	protein	L37e
DNA_RNApol_7kD	PF03604.8	gi|118576950|ref|YP_876693.1|	-	3.4	7.2	5.9	19	4.8	0.2	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Thiolase_C	PF02803.13	gi|118576951|ref|YP_876694.1|	-	3.3e-11	42.6	2.2	7.4e-10	38.3	0.1	3.0	2	2	2	4	4	4	2	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|118576951|ref|YP_876694.1|	-	1.6e-05	24.0	0.0	6.9e-05	21.9	0.0	2.0	3	0	0	3	3	3	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|118576951|ref|YP_876694.1|	-	0.004	16.6	0.2	0.065	12.7	0.1	2.6	3	0	0	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|118576951|ref|YP_876694.1|	-	0.017	14.7	0.1	1.4	8.5	0.0	2.5	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Ketoacyl-synt_C	PF02801.17	gi|118576951|ref|YP_876694.1|	-	0.021	14.6	0.2	0.46	10.3	0.0	2.8	3	0	0	3	3	3	0	Beta-ketoacyl	synthase,	C-terminal	domain
zf-C4_Topoisom	PF01396.14	gi|118576953|ref|YP_876696.1|	-	4.5e-09	35.6	3.7	4e-07	29.4	1.1	2.5	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
zf-ribbon_3	PF13248.1	gi|118576953|ref|YP_876696.1|	-	0.0039	16.3	1.2	0.38	10.0	0.1	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|118576953|ref|YP_876696.1|	-	0.01	16.0	4.6	0.01	16.0	3.2	2.1	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-ISL3	PF14690.1	gi|118576953|ref|YP_876696.1|	-	0.015	15.3	3.9	0.66	10.0	0.2	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2072	PF09845.4	gi|118576953|ref|YP_876696.1|	-	0.033	14.0	1.3	2	8.3	0.1	2.2	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
Auto_anti-p27	PF06677.7	gi|118576953|ref|YP_876696.1|	-	0.046	13.4	0.3	2.7	7.8	0.0	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Lar_restr_allev	PF14354.1	gi|118576953|ref|YP_876696.1|	-	0.055	13.7	1.7	7.5	6.9	0.0	2.4	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|118576953|ref|YP_876696.1|	-	0.099	12.6	0.3	2.4	8.1	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
Ribosomal_S27e	PF01667.12	gi|118576953|ref|YP_876696.1|	-	0.1	12.1	1.4	3.6	7.2	0.1	2.4	2	0	0	2	2	2	0	Ribosomal	protein	S27
zf-tcix	PF14952.1	gi|118576953|ref|YP_876696.1|	-	0.16	11.3	8.9	1.3	8.3	0.1	3.4	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF1936	PF09151.5	gi|118576953|ref|YP_876696.1|	-	0.19	11.2	5.2	0.84	9.1	0.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
UPF0547	PF10571.4	gi|118576953|ref|YP_876696.1|	-	0.36	10.5	3.4	3.4	7.4	0.1	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn_Tnp_IS1595	PF12760.2	gi|118576953|ref|YP_876696.1|	-	4.4	7.1	7.1	3.4	7.5	0.2	2.4	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
CN_hydrolase	PF00795.17	gi|118576954|ref|YP_876697.1|	-	4.5e-32	110.9	0.0	6.5e-32	110.3	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
AP_endonuc_2	PF01261.19	gi|118576954|ref|YP_876697.1|	-	0.076	12.2	0.0	0.15	11.3	0.0	1.5	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
Tautomerase	PF01361.16	gi|118576955|ref|YP_876698.1|	-	1.6e-18	66.0	0.0	1.7e-18	65.9	0.0	1.0	1	0	0	1	1	1	1	Tautomerase	enzyme
Tautomerase_2	PF14552.1	gi|118576955|ref|YP_876698.1|	-	1.4e-09	37.8	0.0	1.5e-09	37.7	0.0	1.0	1	0	0	1	1	1	1	Tautomerase	enzyme
Tautomerase_3	PF14832.1	gi|118576955|ref|YP_876698.1|	-	0.0048	16.8	0.0	0.0052	16.8	0.0	1.0	1	0	0	1	1	1	1	Putative	oxalocrotonate	tautomerase	enzyme
DUF1904	PF08921.6	gi|118576955|ref|YP_876698.1|	-	0.023	14.7	0.0	0.024	14.6	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1904)
Rhomboid	PF01694.17	gi|118576956|ref|YP_876699.1|	-	9.7e-33	113.2	20.2	1.6e-32	112.5	14.0	1.3	1	0	0	1	1	1	1	Rhomboid	family
DUF1331	PF07048.6	gi|118576956|ref|YP_876699.1|	-	0.039	13.4	0.0	0.11	11.9	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1331)
Lar_restr_allev	PF14354.1	gi|118576957|ref|YP_876700.1|	-	0.033	14.4	1.9	0.041	14.1	1.3	1.2	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|118576957|ref|YP_876700.1|	-	0.15	12.0	1.0	1.9	8.5	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|118576957|ref|YP_876700.1|	-	0.21	11.6	2.9	0.87	9.6	0.1	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-RanBP	PF00641.13	gi|118576957|ref|YP_876700.1|	-	0.57	9.3	5.6	0.57	9.3	0.6	2.4	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Zn_Tnp_IS1595	PF12760.2	gi|118576957|ref|YP_876700.1|	-	1.5	8.7	8.2	43	4.0	5.7	2.2	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|118576958|ref|YP_876701.1|	-	0.013	15.7	1.7	0.018	15.3	1.2	1.3	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|118576958|ref|YP_876701.1|	-	0.014	15.1	3.7	0.18	11.6	0.0	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|118576958|ref|YP_876701.1|	-	0.021	14.1	1.4	0.068	12.5	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|118576958|ref|YP_876701.1|	-	0.025	14.5	2.1	0.51	10.3	0.2	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|118576958|ref|YP_876701.1|	-	0.031	13.4	0.9	0.089	12.0	0.1	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|118576958|ref|YP_876701.1|	-	0.099	12.6	5.3	0.55	10.3	0.2	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TFIIS_C	PF01096.13	gi|118576958|ref|YP_876701.1|	-	0.15	11.7	0.2	0.15	11.7	0.2	2.4	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
DUF2082	PF09855.4	gi|118576958|ref|YP_876701.1|	-	0.16	11.8	2.1	2.2	8.1	0.2	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-B_box	PF00643.19	gi|118576958|ref|YP_876701.1|	-	1.3	8.9	6.0	11	5.9	1.6	2.2	2	0	0	2	2	2	0	B-box	zinc	finger
zf-Mss51	PF13824.1	gi|118576958|ref|YP_876701.1|	-	8.5	6.3	7.5	8.9	6.2	1.0	2.4	3	0	0	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HTH_5	PF01022.15	gi|118576959|ref|YP_876702.1|	-	8e-13	47.8	0.2	6.6e-06	25.6	0.0	2.9	2	1	1	3	3	3	2	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|118576959|ref|YP_876702.1|	-	1.1e-12	47.0	0.0	4e-06	26.1	0.0	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|118576959|ref|YP_876702.1|	-	7.5e-07	28.7	0.4	0.0027	17.3	0.1	2.4	2	1	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|118576959|ref|YP_876702.1|	-	9.1e-07	28.3	0.0	0.022	14.3	0.0	2.3	2	0	0	2	2	2	2	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|118576959|ref|YP_876702.1|	-	1.3e-06	27.9	0.1	0.039	13.6	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_20	PF12840.2	gi|118576959|ref|YP_876702.1|	-	2.4e-06	27.2	0.0	0.0092	15.7	0.0	2.2	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|118576959|ref|YP_876702.1|	-	0.00016	21.8	0.0	0.57	10.3	0.0	2.4	1	1	2	3	3	3	2	Winged	helix-turn	helix
MarR	PF01047.17	gi|118576959|ref|YP_876702.1|	-	0.00032	20.3	0.1	0.44	10.2	0.0	2.3	2	0	0	2	2	2	2	MarR	family
FeoC	PF09012.5	gi|118576959|ref|YP_876702.1|	-	0.00041	20.0	0.1	0.42	10.3	0.0	2.2	2	0	0	2	2	2	2	FeoC	like	transcriptional	regulator
HTH_34	PF13601.1	gi|118576959|ref|YP_876702.1|	-	0.00047	20.1	0.0	0.003	17.5	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|118576959|ref|YP_876702.1|	-	0.00093	19.2	0.0	0.085	12.9	0.0	2.4	2	1	0	2	2	2	1	Penicillinase	repressor
HTH_40	PF14493.1	gi|118576959|ref|YP_876702.1|	-	0.0018	18.4	0.0	0.16	12.2	0.0	2.2	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|118576959|ref|YP_876702.1|	-	0.0048	16.6	0.0	1.3	8.8	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
LexA_DNA_bind	PF01726.11	gi|118576959|ref|YP_876702.1|	-	0.011	15.2	0.1	0.19	11.2	0.0	2.3	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_27	PF13463.1	gi|118576959|ref|YP_876702.1|	-	0.014	15.7	0.0	3.5	8.0	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
PaaX	PF07848.7	gi|118576959|ref|YP_876702.1|	-	0.026	14.4	0.1	1.4	8.9	0.0	2.3	2	0	0	2	2	2	0	PaaX-like	protein
Rrf2	PF02082.15	gi|118576959|ref|YP_876702.1|	-	0.076	13.1	0.0	1.2	9.2	0.0	2.3	2	1	0	2	2	2	0	Transcriptional	regulator
DUF839	PF05787.8	gi|118576959|ref|YP_876702.1|	-	0.11	11.4	0.0	0.14	11.0	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF839)
DUF1673	PF07895.6	gi|118576960|ref|YP_876703.1|	-	0.046	13.2	3.0	0.045	13.2	1.2	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1673)
Syndecan	PF01034.15	gi|118576960|ref|YP_876703.1|	-	0.8	9.4	4.5	0.32	10.6	0.7	2.1	1	1	1	2	2	2	0	Syndecan	domain
DUF11	PF01345.13	gi|118576964|ref|YP_876707.1|	-	0.00057	19.8	0.8	0.0011	18.9	0.5	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF11
Cupredoxin_1	PF13473.1	gi|118576965|ref|YP_876708.1|	-	5e-05	23.1	0.0	8.3e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.15	gi|118576965|ref|YP_876708.1|	-	0.00013	22.0	0.0	0.00031	20.9	0.0	1.6	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Copper-bind	PF00127.15	gi|118576966|ref|YP_876709.1|	-	3.5e-06	27.1	0.0	6.9e-06	26.2	0.0	1.5	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|118576966|ref|YP_876709.1|	-	0.0028	17.5	0.0	0.0044	16.8	0.0	1.3	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.15	gi|118576967|ref|YP_876710.1|	-	5.5e-07	29.7	0.1	2e-06	27.9	0.0	1.9	2	0	0	2	2	2	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|118576967|ref|YP_876710.1|	-	9e-06	25.5	0.0	3.5e-05	23.6	0.0	2.0	1	1	0	1	1	1	1	Cupredoxin-like	domain
GYD	PF08734.6	gi|118576968|ref|YP_876711.1|	-	0.024	14.3	0.3	0.063	13.0	0.1	1.7	2	0	0	2	2	2	0	GYD	domain
Lipase_3	PF01764.20	gi|118576968|ref|YP_876711.1|	-	0.1	12.2	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	Lipase	(class	3)
CopD	PF05425.8	gi|118576969|ref|YP_876712.1|	-	5.5e-18	65.1	3.8	5.5e-18	65.1	2.7	3.5	2	1	0	2	2	2	1	Copper	resistance	protein	D
SGL	PF08450.7	gi|118576969|ref|YP_876712.1|	-	4.5e-12	45.8	0.8	3.2e-09	36.5	0.4	5.0	1	1	1	2	2	2	1	SMP-30/Gluconolaconase/LRE-like	region
CopC	PF04234.7	gi|118576969|ref|YP_876712.1|	-	3.9e-10	40.2	0.2	1.1e-09	38.8	0.0	1.9	2	0	0	2	2	2	1	CopC	domain
Reg_prop	PF07494.6	gi|118576969|ref|YP_876712.1|	-	2.6e-05	23.6	2.9	11	6.3	0.0	6.5	7	0	0	7	7	7	1	Two	component	regulator	propeller
YtkA	PF13115.1	gi|118576969|ref|YP_876712.1|	-	0.0012	19.2	0.0	0.0031	17.8	0.0	1.7	1	0	0	1	1	1	1	YtkA-like
NHL	PF01436.16	gi|118576969|ref|YP_876712.1|	-	0.036	14.0	0.0	1.4e+02	2.7	0.0	4.4	4	0	0	4	4	4	0	NHL	repeat
PPC	PF04151.10	gi|118576969|ref|YP_876712.1|	-	0.04	14.8	2.8	0.5	11.3	0.6	2.9	2	0	0	2	2	2	0	Bacterial	pre-peptidase	C-terminal	domain
Toxin_57	PF15535.1	gi|118576969|ref|YP_876712.1|	-	0.18	11.8	0.0	18	5.4	0.0	2.7	2	0	0	2	2	2	0	Putative	toxin	57
CarboxypepD_reg	PF13620.1	gi|118576971|ref|YP_876714.1|	-	3e-05	23.9	0.2	6e-05	23.0	0.1	1.5	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|118576971|ref|YP_876714.1|	-	0.0056	16.6	0.0	0.012	15.6	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4480)
Dioxygenase_C	PF00775.16	gi|118576971|ref|YP_876714.1|	-	0.037	13.2	0.0	0.069	12.3	0.0	1.4	1	0	0	1	1	1	0	Dioxygenase
Big_1	PF02369.11	gi|118576971|ref|YP_876714.1|	-	0.049	13.5	0.2	0.13	12.1	0.0	1.8	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	1)
TPR_14	PF13428.1	gi|118576971|ref|YP_876714.1|	-	0.31	11.7	2.0	0.54	11.0	0.5	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
SNF2_N	PF00176.18	gi|118576973|ref|YP_876716.1|	-	3.8e-37	127.6	0.0	5.1e-37	127.2	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.26	gi|118576973|ref|YP_876716.1|	-	1.8e-08	34.1	0.1	4.7e-08	32.7	0.1	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|118576973|ref|YP_876716.1|	-	4.5e-06	26.2	0.0	2.1e-05	24.0	0.0	2.0	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
MarR_2	PF12802.2	gi|118576974|ref|YP_876717.1|	-	6.3e-05	22.5	0.1	0.00028	20.5	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_5	PF01022.15	gi|118576974|ref|YP_876717.1|	-	0.00065	19.3	0.0	0.0013	18.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|118576974|ref|YP_876717.1|	-	0.0012	19.1	0.0	0.016	15.5	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Crp	PF00325.15	gi|118576974|ref|YP_876717.1|	-	0.0035	16.7	0.4	0.049	13.1	0.0	2.5	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	crp	family
HTH_20	PF12840.2	gi|118576974|ref|YP_876717.1|	-	0.0093	15.7	0.3	0.066	13.0	0.0	2.4	2	1	1	3	3	3	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|118576974|ref|YP_876717.1|	-	0.12	12.0	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
BUD22	PF09073.5	gi|118576975|ref|YP_876718.1|	-	0.98	8.4	3.3	1.3	7.9	2.3	1.1	1	0	0	1	1	1	0	BUD22
Glyco_hydro_2	PF00703.16	gi|118576978|ref|YP_876721.1|	-	0.11	12.8	0.0	0.16	12.4	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	2
Big_5	PF13205.1	gi|118576979|ref|YP_876722.1|	-	1.6e-06	28.6	11.1	0.026	15.0	0.9	4.3	3	0	0	3	3	3	3	Bacterial	Ig-like	domain
NHL	PF01436.16	gi|118576979|ref|YP_876722.1|	-	0.0037	17.1	0.1	0.0037	17.1	0.1	5.1	5	0	0	5	5	5	2	NHL	repeat
DUF3215	PF11503.3	gi|118576979|ref|YP_876722.1|	-	0.042	13.4	0.1	0.31	10.6	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3215)
FAD-oxidase_C	PF02913.14	gi|118576980|ref|YP_876723.1|	-	4e-38	131.1	0.0	7.6e-38	130.2	0.0	1.5	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|118576980|ref|YP_876723.1|	-	1.6e-35	121.5	1.7	1.6e-35	121.5	1.2	1.9	2	1	0	2	2	2	1	FAD	binding	domain
SpaB_C	PF14028.1	gi|118576980|ref|YP_876723.1|	-	0.0091	15.5	0.2	0.02	14.4	0.2	1.5	1	0	0	1	1	1	1	SpaB	C-terminal	domain
HD	PF01966.17	gi|118576981|ref|YP_876724.1|	-	0.0019	18.2	0.1	0.0034	17.3	0.1	1.4	1	0	0	1	1	1	1	HD	domain
DnaJ	PF00226.26	gi|118576983|ref|YP_876726.1|	-	8.1e-24	83.1	0.1	1.2e-23	82.6	0.0	1.3	1	0	0	1	1	1	1	DnaJ	domain
HTH_24	PF13412.1	gi|118576984|ref|YP_876727.1|	-	3.3e-12	45.6	0.6	7.1e-12	44.5	0.3	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|118576984|ref|YP_876727.1|	-	6.7e-12	44.7	3.0	1.1e-11	44.0	2.1	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|118576984|ref|YP_876727.1|	-	7.3e-11	41.6	0.4	1.1e-10	41.0	0.3	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|118576984|ref|YP_876727.1|	-	9.9e-05	21.9	0.2	0.0002	20.9	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
MarR_2	PF12802.2	gi|118576984|ref|YP_876727.1|	-	0.0027	17.3	0.3	0.0049	16.5	0.2	1.4	1	0	0	1	1	1	1	MarR	family
DDRGK	PF09756.4	gi|118576984|ref|YP_876727.1|	-	0.016	14.6	0.0	0.026	13.9	0.0	1.4	1	0	0	1	1	1	0	DDRGK	domain
HTH_CodY	PF08222.6	gi|118576984|ref|YP_876727.1|	-	0.017	14.4	1.4	0.024	13.9	0.2	1.8	2	0	0	2	2	2	0	CodY	helix-turn-helix	domain
HTH_20	PF12840.2	gi|118576984|ref|YP_876727.1|	-	0.019	14.7	0.1	0.034	13.9	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|118576984|ref|YP_876727.1|	-	0.044	13.8	0.2	0.8	9.7	0.0	2.2	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
GYD	PF08734.6	gi|118576984|ref|YP_876727.1|	-	0.059	13.0	0.1	0.094	12.4	0.0	1.3	1	0	0	1	1	1	0	GYD	domain
HTH_27	PF13463.1	gi|118576984|ref|YP_876727.1|	-	0.07	13.4	0.1	0.26	11.6	0.1	1.9	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|118576984|ref|YP_876727.1|	-	0.1	12.2	0.0	0.23	11.1	0.0	1.6	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF603	PF04645.7	gi|118576984|ref|YP_876727.1|	-	0.11	12.3	4.0	6.2	6.7	0.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function,	DUF603
TPR_2	PF07719.12	gi|118576985|ref|YP_876728.1|	-	2.1e-14	52.1	0.1	3.9e-07	29.4	0.0	2.0	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|118576985|ref|YP_876728.1|	-	4.1e-14	51.9	0.0	4.7e-14	51.7	0.0	1.0	1	0	0	1	1	1	1	TPR	repeat
TPR_19	PF14559.1	gi|118576985|ref|YP_876728.1|	-	7.1e-14	51.9	0.0	7.7e-14	51.7	0.0	1.0	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118576985|ref|YP_876728.1|	-	3.4e-12	46.6	0.2	3.8e-12	46.5	0.2	1.1	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118576985|ref|YP_876728.1|	-	3.2e-11	42.3	0.0	2.3e-06	26.9	0.0	2.1	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118576985|ref|YP_876728.1|	-	1.3e-09	37.8	0.8	6.1e-05	23.3	0.0	2.1	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118576985|ref|YP_876728.1|	-	2.3e-09	36.3	0.1	0.0015	18.1	0.0	2.1	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118576985|ref|YP_876728.1|	-	3.5e-09	36.4	0.1	2.8e-08	33.6	0.1	1.9	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118576985|ref|YP_876728.1|	-	9e-08	31.3	0.0	0.00012	21.6	0.0	2.1	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118576985|ref|YP_876728.1|	-	2.2e-06	27.4	0.2	3e-06	26.9	0.1	1.2	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118576985|ref|YP_876728.1|	-	1.4e-05	24.8	0.1	0.0011	18.9	0.0	2.7	3	0	0	3	3	3	1	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|118576985|ref|YP_876728.1|	-	0.00012	21.4	0.0	0.00025	20.3	0.0	1.5	1	1	0	1	1	1	1	Coatomer	epsilon	subunit
TPR_6	PF13174.1	gi|118576985|ref|YP_876728.1|	-	0.00017	21.8	0.0	0.32	11.5	0.0	2.1	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|118576985|ref|YP_876728.1|	-	0.0018	18.5	0.3	0.66	10.5	0.1	2.3	2	0	0	2	2	2	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|118576985|ref|YP_876728.1|	-	0.0018	17.0	0.0	0.0022	16.8	0.0	1.0	1	0	0	1	1	1	1	NMDA	receptor-regulated	protein	1
TPR_10	PF13374.1	gi|118576985|ref|YP_876728.1|	-	0.0043	16.9	1.7	0.66	10.0	0.0	2.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_5	PF12688.2	gi|118576985|ref|YP_876728.1|	-	0.0073	16.3	0.2	0.16	11.9	0.1	2.0	1	1	1	2	2	2	1	Tetratrico	peptide	repeat
Fis1_TPR_C	PF14853.1	gi|118576985|ref|YP_876728.1|	-	0.0094	15.8	0.2	0.69	9.8	0.0	2.1	2	0	0	2	2	2	1	Fis1	C-terminal	tetratricopeptide	repeat
PPR	PF01535.15	gi|118576985|ref|YP_876728.1|	-	0.019	14.9	0.5	0.56	10.3	0.1	2.4	2	1	0	2	2	2	0	PPR	repeat
Apc3	PF12895.2	gi|118576985|ref|YP_876728.1|	-	0.028	14.5	0.0	0.078	13.1	0.0	1.3	1	1	0	1	1	1	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
PPR_1	PF12854.2	gi|118576985|ref|YP_876728.1|	-	0.057	12.9	0.4	0.26	10.7	0.1	2.1	2	0	0	2	2	2	0	PPR	repeat
TPR_15	PF13429.1	gi|118576985|ref|YP_876728.1|	-	0.15	11.1	0.0	0.72	8.8	0.0	1.8	1	1	1	2	2	2	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118576986|ref|YP_876729.1|	-	4.4e-21	73.5	3.9	1.3e-07	30.8	0.2	4.4	4	1	0	4	4	4	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|118576986|ref|YP_876729.1|	-	1.8e-18	64.8	11.3	8e-06	25.3	0.3	4.9	4	1	1	5	5	5	4	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|118576986|ref|YP_876729.1|	-	8.5e-18	63.7	7.0	1.3e-09	37.6	2.3	2.4	2	1	0	2	2	2	2	TPR	repeat
TPR_16	PF13432.1	gi|118576986|ref|YP_876729.1|	-	4.6e-16	58.9	27.1	2.7e-07	31.0	2.5	3.6	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118576986|ref|YP_876729.1|	-	1.9e-15	55.4	0.3	8.8e-05	22.0	0.1	4.5	4	1	1	5	5	5	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118576986|ref|YP_876729.1|	-	2.4e-14	53.0	7.1	7.3e-09	35.4	1.2	2.9	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118576986|ref|YP_876729.1|	-	8.2e-14	50.2	4.6	6.4e-05	22.4	0.2	4.4	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118576986|ref|YP_876729.1|	-	7.1e-12	44.5	0.5	0.00013	21.8	0.0	3.9	3	1	0	3	3	3	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|118576986|ref|YP_876729.1|	-	3.5e-11	43.0	2.0	5.4e-06	26.4	0.0	2.0	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|118576986|ref|YP_876729.1|	-	3.4e-10	39.6	12.5	0.0089	16.5	0.3	4.2	1	1	3	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118576986|ref|YP_876729.1|	-	5.5e-09	36.2	8.4	0.0002	21.5	0.2	3.1	1	1	3	4	4	4	4	Tetratricopeptide	repeat
DUF3856	PF12968.2	gi|118576986|ref|YP_876729.1|	-	1.2e-06	28.4	0.2	0.38	10.5	0.0	3.2	1	1	2	3	3	3	3	Domain	of	Unknown	Function	(DUF3856)
TPR_9	PF13371.1	gi|118576986|ref|YP_876729.1|	-	1.5e-06	27.9	11.9	0.00097	18.9	1.5	3.2	1	1	3	4	4	4	4	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|118576986|ref|YP_876729.1|	-	2e-06	27.5	6.7	0.17	11.8	0.1	3.9	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118576986|ref|YP_876729.1|	-	3.4e-06	27.1	5.0	2.6	8.7	0.1	4.6	4	1	0	4	4	4	1	Tetratricopeptide	repeat
TPR_5	PF12688.2	gi|118576986|ref|YP_876729.1|	-	0.001	19.0	3.4	0.0018	18.3	1.7	1.9	1	1	1	2	2	2	1	Tetratrico	peptide	repeat
MIT	PF04212.13	gi|118576986|ref|YP_876729.1|	-	0.003	17.4	8.8	1	9.3	0.4	4.0	4	1	0	4	4	4	1	MIT	(microtubule	interacting	and	transport)	domain
TPR_4	PF07721.9	gi|118576986|ref|YP_876729.1|	-	0.0085	16.4	4.0	6.2	7.5	0.2	4.2	4	1	0	4	4	3	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|118576986|ref|YP_876729.1|	-	0.025	13.3	0.1	4.3	5.9	0.0	2.0	1	1	1	2	2	2	0	NMDA	receptor-regulated	protein	1
BTAD	PF03704.12	gi|118576986|ref|YP_876729.1|	-	0.22	11.7	3.7	0.37	11.0	0.9	2.1	1	1	0	1	1	1	0	Bacterial	transcriptional	activator	domain
Rad50_zn_hook	PF04423.9	gi|118576987|ref|YP_876730.1|	-	0.0084	15.5	0.2	0.01	15.2	0.1	1.3	1	1	0	1	1	1	1	Rad50	zinc	hook	motif
zf-C2H2	PF00096.21	gi|118576987|ref|YP_876730.1|	-	0.013	15.8	2.5	0.019	15.2	0.3	1.9	1	1	1	2	2	2	0	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|118576987|ref|YP_876730.1|	-	0.027	14.7	0.4	0.027	14.7	0.3	1.8	1	1	1	2	2	2	0	C2H2-type	zinc	finger
zf-C2H2_jaz	PF12171.3	gi|118576987|ref|YP_876730.1|	-	0.086	13.0	0.4	0.12	12.5	0.3	1.3	1	0	0	1	1	1	0	Zinc-finger	double-stranded	RNA-binding
PSCyt1	PF07635.6	gi|118576987|ref|YP_876730.1|	-	0.17	12.2	1.0	0.23	11.8	0.7	1.3	1	1	0	1	1	1	0	Planctomycete	cytochrome	C
Radical_SAM	PF04055.16	gi|118576988|ref|YP_876731.1|	-	2.6e-17	63.4	0.1	4e-17	62.8	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|118576988|ref|YP_876731.1|	-	0.0062	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|118576988|ref|YP_876731.1|	-	0.052	13.6	0.0	0.09	12.8	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF1133	PF06576.6	gi|118576988|ref|YP_876731.1|	-	0.13	11.4	0.0	0.2	10.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1133)
DUF77	PF01910.12	gi|118576989|ref|YP_876732.1|	-	3.2e-27	94.0	0.1	3.6e-27	93.8	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
Ykof	PF07615.6	gi|118576989|ref|YP_876732.1|	-	0.12	12.5	0.0	0.18	12.0	0.0	1.3	1	0	0	1	1	1	0	YKOF-related	Family
DUF4345	PF14248.1	gi|118576990|ref|YP_876733.1|	-	9.2e-06	25.1	0.1	1.2e-05	24.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4345)
Rnf-Nqr	PF02508.9	gi|118576990|ref|YP_876733.1|	-	0.032	13.8	0.0	0.048	13.2	0.0	1.3	1	0	0	1	1	1	0	Rnf-Nqr	subunit,	membrane	protein
RHH_1	PF01402.16	gi|118576992|ref|YP_876735.1|	-	0.00025	20.8	0.2	0.00058	19.6	0.0	1.7	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
HicB	PF05534.7	gi|118576992|ref|YP_876735.1|	-	0.11	12.0	0.0	0.24	11.0	0.0	1.6	1	0	0	1	1	1	0	HicB	family
CBS	PF00571.23	gi|118576993|ref|YP_876736.1|	-	3.3e-41	138.7	4.4	2.4e-12	46.4	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
HTH_20	PF12840.2	gi|118576994|ref|YP_876737.1|	-	1.5e-08	34.3	0.0	2.1e-08	33.8	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|118576994|ref|YP_876737.1|	-	6.3e-05	22.4	0.0	0.0001	21.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|118576994|ref|YP_876737.1|	-	7.1e-05	22.4	0.0	9.8e-05	21.9	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|118576994|ref|YP_876737.1|	-	0.0013	18.3	0.0	0.0019	17.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|118576994|ref|YP_876737.1|	-	0.0038	16.5	0.0	0.0055	16.0	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FUR	PF01475.14	gi|118576994|ref|YP_876737.1|	-	0.015	15.2	0.0	0.018	14.9	0.0	1.1	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
HTH_23	PF13384.1	gi|118576994|ref|YP_876737.1|	-	0.019	14.6	0.0	0.032	13.8	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|118576994|ref|YP_876737.1|	-	0.035	14.1	0.0	0.065	13.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|118576994|ref|YP_876737.1|	-	0.039	14.0	0.0	0.061	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF742	PF05331.6	gi|118576994|ref|YP_876737.1|	-	0.04	13.4	0.0	0.05	13.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
Sigma70_r4	PF04545.11	gi|118576994|ref|YP_876737.1|	-	0.05	12.9	0.0	0.076	12.3	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_27	PF13463.1	gi|118576994|ref|YP_876737.1|	-	0.078	13.3	0.0	0.1	12.9	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|118576994|ref|YP_876737.1|	-	0.095	12.3	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	HTH	domain
Sigma70_r4_2	PF08281.7	gi|118576994|ref|YP_876737.1|	-	0.12	11.8	0.1	0.27	10.7	0.0	1.6	1	1	0	1	1	1	0	Sigma-70,	region	4
P-II	PF00543.17	gi|118576995|ref|YP_876738.1|	-	2.5e-16	59.9	0.5	3.5e-16	59.5	0.3	1.2	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
TFIIB	PF00382.14	gi|118576996|ref|YP_876739.1|	-	3.7e-30	103.5	1.7	4.8e-14	51.9	0.2	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|118576996|ref|YP_876739.1|	-	5.4e-06	25.6	0.1	1e-05	24.7	0.1	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
HTH_11	PF08279.7	gi|118576996|ref|YP_876739.1|	-	0.0051	16.4	0.5	0.26	10.9	0.0	2.8	3	0	0	3	3	3	1	HTH	domain
Cyclin_N	PF00134.18	gi|118576996|ref|YP_876739.1|	-	0.019	14.5	0.0	1.7	8.2	0.0	2.1	1	1	1	2	2	2	0	Cyclin,	N-terminal	domain
Rrf2	PF02082.15	gi|118576996|ref|YP_876739.1|	-	0.057	13.5	0.1	5.5	7.1	0.1	3.0	1	1	2	3	3	3	0	Transcriptional	regulator
Ferritin	PF00210.19	gi|118576997|ref|YP_876740.1|	-	2e-35	121.6	2.0	2.3e-35	121.3	1.4	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
Rubrerythrin	PF02915.12	gi|118576997|ref|YP_876740.1|	-	9.2e-06	26.0	1.0	1.4e-05	25.4	0.7	1.4	1	0	0	1	1	1	1	Rubrerythrin
ATP-grasp_5	PF13549.1	gi|118576997|ref|YP_876740.1|	-	0.11	11.6	0.3	0.14	11.3	0.2	1.2	1	0	0	1	1	1	0	ATP-grasp	domain
DUF892	PF05974.7	gi|118576997|ref|YP_876740.1|	-	0.51	10.1	4.0	3	7.6	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF892)
PolC_DP2	PF03833.8	gi|118576998|ref|YP_876741.1|	-	2.9e-245	816.1	0.0	1.5e-244	813.7	0.0	1.9	1	1	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DZR	PF12773.2	gi|118576998|ref|YP_876741.1|	-	0.97	9.3	18.1	0.41	10.4	7.6	3.0	2	1	0	2	2	2	0	Double	zinc	ribbon
PcrB	PF01884.12	gi|118576999|ref|YP_876742.1|	-	9.6e-63	211.5	0.0	1.2e-62	211.2	0.0	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|118576999|ref|YP_876742.1|	-	1.6e-07	30.8	0.1	6e-07	28.9	0.0	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
IMPDH	PF00478.20	gi|118576999|ref|YP_876742.1|	-	0.00016	20.6	0.0	0.0024	16.8	0.0	2.0	2	0	0	2	2	2	1	IMP	dehydrogenase	/	GMP	reductase	domain
Dus	PF01207.12	gi|118576999|ref|YP_876742.1|	-	0.0011	17.8	0.0	0.036	12.8	0.0	2.1	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
ThiG	PF05690.9	gi|118576999|ref|YP_876742.1|	-	0.0015	17.6	1.2	0.049	12.6	0.1	2.2	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.15	gi|118576999|ref|YP_876742.1|	-	0.0016	17.0	0.0	0.0054	15.2	0.0	1.8	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
B12-binding	PF02310.14	gi|118576999|ref|YP_876742.1|	-	0.0033	17.3	1.1	0.64	9.9	0.1	3.4	3	1	0	3	3	3	1	B12	binding	domain
FMN_dh	PF01070.13	gi|118576999|ref|YP_876742.1|	-	0.0064	15.3	0.0	0.065	12.0	0.0	2.0	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
TMP-TENI	PF02581.12	gi|118576999|ref|YP_876742.1|	-	0.0073	15.4	0.1	0.024	13.7	0.0	1.8	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase/TENI
NMO	PF03060.10	gi|118576999|ref|YP_876742.1|	-	0.011	14.9	1.7	0.9	8.6	0.4	2.2	2	0	0	2	2	2	0	Nitronate	monooxygenase
IGPS	PF00218.16	gi|118576999|ref|YP_876742.1|	-	0.012	14.6	0.2	0.47	9.4	0.0	2.5	3	0	0	3	3	3	0	Indole-3-glycerol	phosphate	synthase
Amidohydro_2	PF04909.9	gi|118576999|ref|YP_876742.1|	-	0.021	14.3	0.1	0.18	11.3	0.0	2.0	1	1	1	2	2	2	0	Amidohydrolase
NanE	PF04131.9	gi|118576999|ref|YP_876742.1|	-	0.03	13.3	0.2	0.43	9.5	0.0	2.2	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Ribul_P_3_epim	PF00834.14	gi|118576999|ref|YP_876742.1|	-	0.032	13.3	0.0	0.069	12.2	0.0	1.5	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
Hydrolase_like	PF13242.1	gi|118576999|ref|YP_876742.1|	-	0.12	12.0	3.6	1.1	9.0	0.1	3.3	3	1	1	4	4	4	0	HAD-hyrolase-like
DSBA	PF01323.15	gi|118576999|ref|YP_876742.1|	-	0.16	11.5	0.0	4.1	6.9	0.0	2.1	2	0	0	2	2	2	0	DSBA-like	thioredoxin	domain
G3P_antiterm	PF04309.7	gi|118576999|ref|YP_876742.1|	-	0.16	10.9	0.0	0.31	10.0	0.0	1.3	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
oligo_HPY	PF08352.7	gi|118577001|ref|YP_876744.1|	-	0.052	13.9	0.0	0.12	12.6	0.0	1.6	2	0	0	2	2	2	0	Oligopeptide/dipeptide	transporter,	C-terminal	region
Copper-bind	PF00127.15	gi|118577002|ref|YP_876745.1|	-	4.5e-05	23.6	0.2	0.67	10.2	0.0	2.9	2	2	0	2	2	2	2	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|118577002|ref|YP_876745.1|	-	7.2e-05	22.6	0.0	0.62	9.9	0.0	2.7	2	0	0	2	2	2	2	Cupredoxin-like	domain
DUF3852	PF12963.2	gi|118577003|ref|YP_876746.1|	-	0.014	15.3	0.1	0.018	15.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3852)
DUF4307	PF14155.1	gi|118577003|ref|YP_876746.1|	-	0.032	13.9	0.2	0.038	13.7	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4307)
TrmB	PF01978.14	gi|118577006|ref|YP_876749.1|	-	9.3e-06	25.2	0.1	2e-05	24.1	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|118577006|ref|YP_876749.1|	-	8.1e-05	21.9	0.3	0.0034	16.7	0.3	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|118577006|ref|YP_876749.1|	-	0.0013	18.9	1.8	0.0062	16.8	0.2	2.6	3	0	0	3	3	3	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|118577006|ref|YP_876749.1|	-	0.0016	18.0	0.7	0.008	15.8	0.1	2.3	3	0	0	3	3	3	1	MarR	family
MarR	PF01047.17	gi|118577006|ref|YP_876749.1|	-	0.005	16.5	0.5	0.015	15.0	0.4	1.8	1	0	0	1	1	1	1	MarR	family
Replic_Relax	PF13814.1	gi|118577006|ref|YP_876749.1|	-	0.013	15.3	0.1	0.025	14.4	0.1	1.5	1	0	0	1	1	1	0	Replication-relaxation
DUF3460	PF11943.3	gi|118577006|ref|YP_876749.1|	-	0.022	14.8	0.0	7.9	6.6	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3460)
Penicillinase_R	PF03965.11	gi|118577006|ref|YP_876749.1|	-	0.03	14.4	0.2	0.079	13.0	0.1	1.8	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_34	PF13601.1	gi|118577006|ref|YP_876749.1|	-	0.038	14.0	0.0	0.074	13.0	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|118577006|ref|YP_876749.1|	-	0.044	13.5	0.2	0.1	12.3	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_Crp_2	PF13545.1	gi|118577006|ref|YP_876749.1|	-	0.053	13.3	0.1	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Crp	PF00325.15	gi|118577006|ref|YP_876749.1|	-	0.08	12.4	0.8	0.18	11.2	0.5	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	crp	family
Rrf2	PF02082.15	gi|118577006|ref|YP_876749.1|	-	0.12	12.4	0.1	0.44	10.7	0.1	1.8	1	1	0	1	1	1	0	Transcriptional	regulator
HTH_20	PF12840.2	gi|118577006|ref|YP_876749.1|	-	0.15	11.9	0.9	0.31	10.8	0.1	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
Antitoxin-MazE	PF04014.13	gi|118577007|ref|YP_876750.1|	-	0.00012	21.6	0.0	0.00015	21.3	0.0	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|118577007|ref|YP_876750.1|	-	0.066	12.6	0.1	0.089	12.2	0.0	1.4	1	1	0	1	1	1	0	Translation	initiation	factor	1A	/	IF-1
AbrB-like	PF14250.1	gi|118577007|ref|YP_876750.1|	-	0.12	12.3	0.0	0.13	12.1	0.0	1.1	1	0	0	1	1	1	0	AbrB-like	transcriptional	regulator
Penicillinase_R	PF03965.11	gi|118577009|ref|YP_876752.1|	-	0.0099	15.9	0.0	0.014	15.5	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
Cdc6_C	PF09079.6	gi|118577010|ref|YP_876753.1|	-	2.1e-18	65.7	0.1	7.7e-18	63.9	0.1	1.9	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|118577010|ref|YP_876753.1|	-	4.2e-14	52.7	0.1	1.1e-13	51.4	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|118577010|ref|YP_876753.1|	-	4.2e-12	46.4	0.1	3.4e-11	43.4	0.0	2.3	2	1	0	2	2	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|118577010|ref|YP_876753.1|	-	2.7e-11	43.8	0.0	6.5e-11	42.5	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|118577010|ref|YP_876753.1|	-	2.6e-06	27.2	0.0	3.9e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|118577010|ref|YP_876753.1|	-	5.1e-06	26.3	0.7	2e-05	24.4	0.5	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
DUF2075	PF09848.4	gi|118577010|ref|YP_876753.1|	-	0.00026	20.1	0.0	0.00035	19.6	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
T2SE	PF00437.15	gi|118577010|ref|YP_876753.1|	-	0.00079	18.4	0.1	0.0033	16.3	0.0	1.9	2	1	0	2	2	2	1	Type	II/IV	secretion	system	protein
PIF1	PF05970.9	gi|118577010|ref|YP_876753.1|	-	0.0012	17.8	0.0	0.0024	16.9	0.0	1.4	1	0	0	1	1	1	1	PIF1-like	helicase
KAP_NTPase	PF07693.9	gi|118577010|ref|YP_876753.1|	-	0.0013	17.8	0.1	0.33	9.9	0.0	2.2	1	1	0	2	2	2	1	KAP	family	P-loop	domain
AAA_19	PF13245.1	gi|118577010|ref|YP_876753.1|	-	0.0017	18.0	0.0	0.006	16.3	0.0	1.9	1	0	0	1	1	1	1	Part	of	AAA	domain
DUF815	PF05673.8	gi|118577010|ref|YP_876753.1|	-	0.0019	17.1	0.0	0.0056	15.6	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.17	gi|118577010|ref|YP_876753.1|	-	0.0025	17.9	0.0	0.0067	16.5	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
AAA_5	PF07728.9	gi|118577010|ref|YP_876753.1|	-	0.0026	17.4	0.6	0.021	14.5	0.4	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.10	gi|118577010|ref|YP_876753.1|	-	0.0035	17.0	1.0	0.079	12.6	0.7	2.4	1	1	0	1	1	1	1	NTPase
AAA_25	PF13481.1	gi|118577010|ref|YP_876753.1|	-	0.0035	16.7	0.4	0.065	12.6	0.1	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_32	PF13654.1	gi|118577010|ref|YP_876753.1|	-	0.0042	15.8	0.1	0.034	12.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|118577010|ref|YP_876753.1|	-	0.0048	15.5	0.0	0.0092	14.6	0.0	1.4	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
KaiC	PF06745.8	gi|118577010|ref|YP_876753.1|	-	0.0077	15.3	1.1	0.3	10.1	0.8	2.2	1	1	0	1	1	1	1	KaiC
Zot	PF05707.7	gi|118577010|ref|YP_876753.1|	-	0.0084	15.5	0.0	0.034	13.6	0.0	1.9	1	1	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_24	PF13479.1	gi|118577010|ref|YP_876753.1|	-	0.0099	15.4	0.2	0.023	14.2	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|118577010|ref|YP_876753.1|	-	0.01	14.7	0.0	0.015	14.1	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
DEAD	PF00270.24	gi|118577010|ref|YP_876753.1|	-	0.024	14.1	0.1	2.2	7.7	0.0	2.3	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
AAA_11	PF13086.1	gi|118577010|ref|YP_876753.1|	-	0.026	14.0	0.0	0.048	13.2	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|118577010|ref|YP_876753.1|	-	0.041	13.3	0.0	0.085	12.3	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|118577010|ref|YP_876753.1|	-	0.046	13.3	0.0	0.14	11.7	0.0	1.8	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|118577010|ref|YP_876753.1|	-	0.063	12.6	0.0	3.3	7.0	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|118577010|ref|YP_876753.1|	-	0.067	12.2	0.0	0.15	11.1	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
AAA_33	PF13671.1	gi|118577010|ref|YP_876753.1|	-	0.068	13.0	0.0	0.18	11.6	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Torsin	PF06309.6	gi|118577010|ref|YP_876753.1|	-	0.091	12.6	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Torsin
Mg_chelatase	PF01078.16	gi|118577010|ref|YP_876753.1|	-	0.1	11.7	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DNA_pol_E_B	PF04042.11	gi|118577011|ref|YP_876754.1|	-	1.2e-23	83.4	0.0	1.7e-23	82.9	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos_2	PF12850.2	gi|118577011|ref|YP_876754.1|	-	5.4e-10	39.3	0.1	2.8e-09	36.9	0.0	2.0	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|118577011|ref|YP_876754.1|	-	2.2e-05	23.9	0.1	4e-05	23.1	0.0	1.5	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
tRNA_anti-codon	PF01336.20	gi|118577011|ref|YP_876754.1|	-	0.0061	16.3	0.0	0.014	15.1	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DUF95	PF01944.12	gi|118577012|ref|YP_876755.1|	-	1e-09	38.2	9.5	1.3e-09	37.8	6.6	1.1	1	0	0	1	1	1	1	Integral	membrane	protein	DUF95
TP_methylase	PF00590.15	gi|118577013|ref|YP_876756.1|	-	1.1e-35	123.2	0.2	1.3e-35	123.0	0.1	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
bPH_3	PF14470.1	gi|118577014|ref|YP_876757.1|	-	7.7e-05	22.8	0.0	0.11	12.7	0.0	2.2	2	0	0	2	2	2	2	Bacterial	PH	domain
CUE	PF02845.11	gi|118577014|ref|YP_876757.1|	-	0.019	14.4	0.1	0.033	13.6	0.1	1.4	1	0	0	1	1	1	0	CUE	domain
Pro_isomerase	PF00160.16	gi|118577015|ref|YP_876758.1|	-	2.7e-42	144.5	0.0	4.2e-42	143.9	0.0	1.2	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
Pyr_redox_2	PF07992.9	gi|118577016|ref|YP_876759.1|	-	6.8e-13	48.9	0.0	2.8e-12	46.9	0.0	2.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|118577016|ref|YP_876759.1|	-	5.2e-10	39.6	0.0	1.7e-09	37.9	0.0	1.9	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|118577016|ref|YP_876759.1|	-	3.1e-05	23.0	1.5	0.063	12.1	0.0	3.1	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|118577016|ref|YP_876759.1|	-	0.0064	16.5	0.0	0.065	13.2	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|118577016|ref|YP_876759.1|	-	0.078	12.7	0.0	9.9	5.9	0.0	2.3	2	0	0	2	2	2	0	FAD-NAD(P)-binding
SecD-TM1	PF13721.1	gi|118577017|ref|YP_876760.1|	-	0.1	12.8	0.0	0.83	9.9	0.0	2.1	2	0	0	2	2	2	0	SecD	export	protein	N-terminal	TM	region
HSP20	PF00011.16	gi|118577018|ref|YP_876761.1|	-	4.1e-09	36.2	2.3	8e-08	32.0	1.6	2.1	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|118577018|ref|YP_876761.1|	-	0.0033	17.9	0.0	0.0047	17.4	0.0	1.2	1	0	0	1	1	1	1	CS	domain
PIH1	PF08190.7	gi|118577018|ref|YP_876761.1|	-	0.015	14.7	0.0	0.018	14.4	0.0	1.1	1	0	0	1	1	1	0	pre-RNA	processing	PIH1/Nop17
GvpH	PF05455.6	gi|118577018|ref|YP_876761.1|	-	0.015	14.9	0.0	0.018	14.6	0.0	1.2	1	0	0	1	1	1	0	GvpH
AAA	PF00004.24	gi|118577019|ref|YP_876762.1|	-	7e-97	320.7	0.0	3.7e-48	163.0	0.0	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|118577019|ref|YP_876762.1|	-	2e-22	78.9	0.0	7.6e-22	77.0	0.0	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.9	gi|118577019|ref|YP_876762.1|	-	5.8e-15	55.6	0.0	1e-06	28.8	0.0	2.3	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.9	gi|118577019|ref|YP_876762.1|	-	6.3e-15	55.1	0.3	2.1e-07	30.7	0.0	3.5	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|118577019|ref|YP_876762.1|	-	5.1e-13	48.6	0.0	4.5e-07	29.1	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|118577019|ref|YP_876762.1|	-	7.1e-13	48.8	0.5	0.0028	17.7	0.1	4.3	2	2	0	2	2	2	2	AAA	domain
CDC48_2	PF02933.12	gi|118577019|ref|YP_876762.1|	-	2.8e-12	46.0	0.1	6.3e-12	44.9	0.1	1.6	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_16	PF13191.1	gi|118577019|ref|YP_876762.1|	-	3.7e-12	46.5	0.0	4.3e-06	26.8	0.0	3.2	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|118577019|ref|YP_876762.1|	-	3.8e-11	43.8	0.0	0.00011	22.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|118577019|ref|YP_876762.1|	-	2.7e-10	39.8	1.6	0.00021	20.9	0.1	3.1	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_14	PF13173.1	gi|118577019|ref|YP_876762.1|	-	6.2e-10	39.0	0.0	9.7e-05	22.2	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|118577019|ref|YP_876762.1|	-	2.6e-09	37.0	0.0	0.00093	19.0	0.0	2.6	2	1	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|118577019|ref|YP_876762.1|	-	1.2e-08	34.0	0.0	0.004	15.9	0.0	2.4	2	0	0	2	2	2	2	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|118577019|ref|YP_876762.1|	-	1.8e-07	30.7	0.2	0.0099	15.3	0.0	2.3	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|118577019|ref|YP_876762.1|	-	2.4e-07	30.1	0.5	0.021	14.0	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|118577019|ref|YP_876762.1|	-	2.7e-07	29.9	0.0	0.014	14.5	0.0	2.3	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.1	gi|118577019|ref|YP_876762.1|	-	8.7e-07	29.3	0.1	0.049	13.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_28	PF13521.1	gi|118577019|ref|YP_876762.1|	-	1.9e-06	27.9	0.0	0.0091	15.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.21	gi|118577019|ref|YP_876762.1|	-	2.4e-06	27.1	0.0	0.69	9.3	0.0	3.7	4	0	0	4	4	4	2	Sigma-54	interaction	domain
AAA_25	PF13481.1	gi|118577019|ref|YP_876762.1|	-	4.2e-06	26.3	5.6	0.25	10.7	0.2	4.1	2	2	0	3	3	3	2	AAA	domain
RNA_helicase	PF00910.17	gi|118577019|ref|YP_876762.1|	-	6.5e-06	26.2	0.0	0.17	12.0	0.0	2.7	3	0	0	3	3	2	2	RNA	helicase
AAA_3	PF07726.6	gi|118577019|ref|YP_876762.1|	-	1.5e-05	24.6	0.0	0.21	11.1	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|118577019|ref|YP_876762.1|	-	1.6e-05	24.5	0.1	0.027	14.0	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
NACHT	PF05729.7	gi|118577019|ref|YP_876762.1|	-	3.4e-05	23.5	0.2	1.2	8.7	0.0	4.1	5	0	0	5	5	5	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|118577019|ref|YP_876762.1|	-	4.2e-05	23.3	0.0	0.0043	16.7	0.0	2.9	2	1	1	3	3	3	1	Archaeal	ATPase
NTPase_1	PF03266.10	gi|118577019|ref|YP_876762.1|	-	7.3e-05	22.5	1.0	0.47	10.1	0.0	3.6	2	1	1	3	3	3	1	NTPase
PhoH	PF02562.11	gi|118577019|ref|YP_876762.1|	-	7.9e-05	21.9	0.4	0.3	10.3	0.0	2.4	2	0	0	2	2	2	2	PhoH-like	protein
ABC_tran	PF00005.22	gi|118577019|ref|YP_876762.1|	-	8.3e-05	22.9	0.0	0.58	10.4	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_11	PF13086.1	gi|118577019|ref|YP_876762.1|	-	0.00032	20.3	0.0	0.24	10.9	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.17	gi|118577019|ref|YP_876762.1|	-	0.0004	19.3	0.2	0.65	8.7	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
AAA_24	PF13479.1	gi|118577019|ref|YP_876762.1|	-	0.00053	19.6	2.3	0.049	13.1	0.3	2.8	2	1	1	3	3	3	1	AAA	domain
KaiC	PF06745.8	gi|118577019|ref|YP_876762.1|	-	0.00068	18.8	0.2	0.35	9.9	0.0	3.0	3	0	0	3	3	3	1	KaiC
Bac_DnaA	PF00308.13	gi|118577019|ref|YP_876762.1|	-	0.001	18.7	0.0	0.073	12.6	0.0	2.4	2	0	0	2	2	2	1	Bacterial	dnaA	protein
Parvo_NS1	PF01057.12	gi|118577019|ref|YP_876762.1|	-	0.0011	17.8	0.1	0.84	8.4	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
DUF2075	PF09848.4	gi|118577019|ref|YP_876762.1|	-	0.0014	17.7	0.0	0.97	8.3	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|118577019|ref|YP_876762.1|	-	0.0015	18.3	0.0	0.11	12.3	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Sigma54_activ_2	PF14532.1	gi|118577019|ref|YP_876762.1|	-	0.0019	18.2	0.0	1.6	8.7	0.0	2.5	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AFG1_ATPase	PF03969.11	gi|118577019|ref|YP_876762.1|	-	0.0087	14.8	0.1	3.5	6.3	0.1	2.3	2	0	0	2	2	2	0	AFG1-like	ATPase
DUF815	PF05673.8	gi|118577019|ref|YP_876762.1|	-	0.013	14.4	0.0	1.3	7.8	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
UPF0079	PF02367.12	gi|118577019|ref|YP_876762.1|	-	0.023	14.3	0.6	8.7	6.0	0.0	2.7	2	1	1	3	3	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
ATP-synt_ab	PF00006.20	gi|118577019|ref|YP_876762.1|	-	0.034	13.6	0.0	5.8	6.3	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
SKI	PF01202.17	gi|118577019|ref|YP_876762.1|	-	0.069	13.0	0.1	3.3	7.5	0.0	2.4	2	0	0	2	2	2	0	Shikimate	kinase
Torsin	PF06309.6	gi|118577019|ref|YP_876762.1|	-	0.074	12.9	0.0	2.5	8.0	0.0	2.5	2	0	0	2	2	2	0	Torsin
Viral_helicase1	PF01443.13	gi|118577019|ref|YP_876762.1|	-	0.084	12.3	0.0	0.28	10.6	0.0	1.8	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Zot	PF05707.7	gi|118577019|ref|YP_876762.1|	-	0.23	10.8	0.1	1.2e+02	2.0	0.0	3.6	4	0	0	4	4	4	0	Zonular	occludens	toxin	(Zot)
KTI12	PF08433.5	gi|118577019|ref|YP_876762.1|	-	0.29	10.3	0.2	18	4.4	0.0	2.6	2	1	0	2	2	2	0	Chromatin	associated	protein	KTI12
DAP3	PF10236.4	gi|118577019|ref|YP_876762.1|	-	0.29	10.0	0.0	14	4.5	0.0	2.2	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
SHMT	PF00464.14	gi|118577020|ref|YP_876763.1|	-	3.5e-75	252.8	0.0	4.4e-75	252.5	0.0	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|118577020|ref|YP_876763.1|	-	9.6e-07	28.0	0.0	4.4e-06	25.8	0.0	2.0	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|118577020|ref|YP_876763.1|	-	1.1e-06	28.0	0.1	1.7e-06	27.4	0.1	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.8	gi|118577020|ref|YP_876763.1|	-	5.7e-05	22.0	0.0	8.9e-05	21.3	0.0	1.2	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Aminotran_5	PF00266.14	gi|118577020|ref|YP_876763.1|	-	0.00012	21.0	0.1	0.0003	19.6	0.1	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
Cpn60_TCP1	PF00118.19	gi|118577022|ref|YP_876765.1|	-	4.7e-163	543.2	14.5	5.5e-163	543.0	10.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Ustilago_mating	PF05722.7	gi|118577022|ref|YP_876765.1|	-	0.064	12.5	0.0	0.13	11.5	0.0	1.4	1	0	0	1	1	1	0	Ustilago	B	locus	mating-type	protein
TMEM125	PF15109.1	gi|118577023|ref|YP_876766.1|	-	0.037	14.1	2.8	0.052	13.6	1.9	1.2	1	0	0	1	1	1	0	TMEM125	protein	family
5TM-5TMR_LYT	PF07694.7	gi|118577023|ref|YP_876766.1|	-	0.22	10.8	6.8	0.27	10.5	4.7	1.1	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
RTA1	PF04479.8	gi|118577023|ref|YP_876766.1|	-	0.81	9.1	3.6	0.95	8.8	2.5	1.1	1	0	0	1	1	1	0	RTA1	like	protein
DUF2628	PF10947.3	gi|118577023|ref|YP_876766.1|	-	0.93	9.3	5.6	0.15	11.8	1.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2628)
DUF2788	PF10981.3	gi|118577023|ref|YP_876766.1|	-	2.9	7.7	10.8	5.9	6.7	3.5	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2788)
Gln-synt_C	PF00120.19	gi|118577024|ref|YP_876767.1|	-	1.8e-87	292.7	0.0	2.3e-87	292.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|118577024|ref|YP_876767.1|	-	4e-25	87.1	0.0	7.9e-25	86.2	0.0	1.5	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
MgtE	PF01769.11	gi|118577026|ref|YP_876769.1|	-	0.087	13.1	1.0	0.11	12.7	0.7	1.2	1	0	0	1	1	1	0	Divalent	cation	transporter
DUF1772	PF08592.6	gi|118577026|ref|YP_876769.1|	-	0.09	12.5	7.1	0.11	12.2	4.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
DUF4131	PF13567.1	gi|118577026|ref|YP_876769.1|	-	0.93	8.8	4.7	1.1	8.5	3.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
zf-AN1	PF01428.11	gi|118577027|ref|YP_876770.1|	-	2.3e-13	49.7	6.1	2.9e-13	49.4	4.2	1.1	1	0	0	1	1	1	1	AN1-like	Zinc	finger
Nop10p	PF04135.7	gi|118577027|ref|YP_876770.1|	-	0.11	12.2	0.4	0.19	11.5	0.2	1.5	1	1	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
RecR	PF02132.10	gi|118577027|ref|YP_876770.1|	-	0.11	11.8	0.4	0.21	11.0	0.3	1.4	1	0	0	1	1	1	0	RecR	protein
UPF1_Zn_bind	PF09416.5	gi|118577027|ref|YP_876770.1|	-	0.19	11.3	1.1	0.22	11.0	0.8	1.1	1	0	0	1	1	1	0	RNA	helicase	(UPF2	interacting	domain)
Transp_Tc5_C	PF04236.10	gi|118577027|ref|YP_876770.1|	-	0.36	11.0	3.4	0.74	10.0	2.4	1.5	1	1	0	1	1	1	0	Tc5	transposase	C-terminal	domain
DZR	PF12773.2	gi|118577027|ref|YP_876770.1|	-	0.62	9.9	4.8	1	9.2	3.3	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
Cys_rich_CPXG	PF14255.1	gi|118577027|ref|YP_876770.1|	-	9.8	6.0	7.7	2.2	8.1	0.9	2.3	1	1	1	2	2	2	0	Cysteine-rich	CPXCG
adh_short	PF00106.20	gi|118577028|ref|YP_876771.1|	-	2.2e-36	125.2	1.2	2.2e-36	125.2	0.8	1.6	2	0	0	2	2	2	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|118577028|ref|YP_876771.1|	-	1.2e-18	67.7	0.3	1.7e-18	67.3	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|118577028|ref|YP_876771.1|	-	1.6e-13	50.7	0.5	2.5e-13	50.1	0.4	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|118577028|ref|YP_876771.1|	-	0.00018	21.5	4.4	0.00068	19.6	3.0	1.8	1	1	0	1	1	1	1	NADH(P)-binding
THF_DHG_CYH_C	PF02882.14	gi|118577028|ref|YP_876771.1|	-	0.0005	19.1	0.2	0.0036	16.3	0.0	2.1	1	1	1	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Eno-Rase_NADH_b	PF12242.3	gi|118577028|ref|YP_876771.1|	-	0.0022	17.7	2.9	0.0057	16.4	2.0	1.7	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Epimerase	PF01370.16	gi|118577028|ref|YP_876771.1|	-	0.0023	17.4	0.8	0.016	14.6	0.6	2.2	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
TPM	PF04536.9	gi|118577028|ref|YP_876771.1|	-	0.052	13.4	0.1	3.2	7.6	0.0	2.3	2	0	0	2	2	2	0	TLP18.3,	Psb32	and	MOLO-1	founding	proteins	of	phosphatase
HEM4	PF02602.10	gi|118577028|ref|YP_876771.1|	-	0.061	12.5	1.1	0.22	10.7	0.2	2.2	2	0	0	2	2	2	0	Uroporphyrinogen-III	synthase	HemD
IlvN	PF07991.7	gi|118577028|ref|YP_876771.1|	-	0.094	12.0	0.2	0.23	10.8	0.2	1.7	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
HhH-GPD	PF00730.20	gi|118577030|ref|YP_876773.1|	-	2.5e-16	59.8	0.0	3.4e-16	59.4	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH_5	PF14520.1	gi|118577030|ref|YP_876773.1|	-	0.047	13.8	0.0	8.1	6.7	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
APH	PF01636.18	gi|118577031|ref|YP_876774.1|	-	0.0029	17.3	0.0	0.0044	16.7	0.0	1.4	1	1	0	1	1	1	1	Phosphotransferase	enzyme	family
RIO1	PF01163.17	gi|118577031|ref|YP_876774.1|	-	0.0073	15.6	0.0	0.0096	15.2	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
tRNA_NucTransf2	PF09249.6	gi|118577032|ref|YP_876775.1|	-	4.6e-36	123.1	0.0	6.9e-36	122.5	0.0	1.3	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|118577032|ref|YP_876775.1|	-	4.1e-09	36.6	0.0	8.6e-09	35.6	0.0	1.5	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
LigT_PEase	PF02834.11	gi|118577033|ref|YP_876776.1|	-	6.4e-22	77.3	0.0	8e-14	51.3	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|118577033|ref|YP_876776.1|	-	3.1e-10	39.9	0.0	3.7e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|118577033|ref|YP_876776.1|	-	0.00014	21.6	0.0	0.00021	21.0	0.0	1.3	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
AAA_17	PF13207.1	gi|118577034|ref|YP_876777.1|	-	2.5e-05	25.0	0.0	4e-05	24.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|118577034|ref|YP_876777.1|	-	0.00025	21.3	0.0	0.00036	20.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RNA_binding	PF01877.12	gi|118577035|ref|YP_876778.1|	-	2.5e-12	46.8	0.0	5.9e-12	45.6	0.0	1.6	1	1	0	1	1	1	1	RNA	binding
Lactamase_B_2	PF12706.2	gi|118577037|ref|YP_876780.1|	-	9.5e-30	103.5	0.0	1.3e-29	103.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|118577037|ref|YP_876780.1|	-	3.7e-11	43.0	0.0	1.4e-10	41.1	0.0	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|118577037|ref|YP_876780.1|	-	0.013	14.9	0.0	0.024	14.0	0.0	1.4	1	0	0	1	1	1	0	tRNase	Z	endonuclease
Aldo_ket_red	PF00248.16	gi|118577038|ref|YP_876781.1|	-	4.6e-50	170.0	0.0	5e-50	169.9	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Pribosyltran_N	PF13793.1	gi|118577039|ref|YP_876782.1|	-	5.9e-15	55.0	0.0	9.5e-15	54.3	0.0	1.3	1	0	0	1	1	1	1	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyl_synth	PF14572.1	gi|118577039|ref|YP_876782.1|	-	1.1e-13	51.3	1.0	4.3e-13	49.4	0.1	2.2	2	1	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
Pribosyltran	PF00156.22	gi|118577039|ref|YP_876782.1|	-	1.2e-13	50.8	0.0	2.7e-13	49.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|118577039|ref|YP_876782.1|	-	0.0015	17.8	0.0	0.0022	17.2	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
MS_channel	PF00924.13	gi|118577040|ref|YP_876783.1|	-	6.9e-28	97.3	0.1	6.9e-28	97.3	0.1	1.8	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF373	PF04123.8	gi|118577040|ref|YP_876783.1|	-	0.26	10.2	4.9	1.7	7.5	0.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF373)
DUF4293	PF14126.1	gi|118577040|ref|YP_876783.1|	-	6.5	6.6	6.6	4	7.3	0.1	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4293)
Fer4_14	PF13394.1	gi|118577041|ref|YP_876784.1|	-	0.00018	21.5	0.0	0.00045	20.2	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|118577041|ref|YP_876784.1|	-	0.00054	20.1	0.1	0.0046	17.1	0.0	2.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|118577041|ref|YP_876784.1|	-	0.009	16.1	0.0	0.02	14.9	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF919	PF06034.6	gi|118577041|ref|YP_876784.1|	-	0.093	12.3	1.1	0.18	11.4	0.8	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Gln-synt_C	PF00120.19	gi|118577042|ref|YP_876785.1|	-	3.4e-84	282.0	0.0	4.3e-84	281.7	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|118577042|ref|YP_876785.1|	-	3.9e-23	80.8	0.0	7e-23	80.0	0.0	1.5	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
SHOCT	PF09851.4	gi|118577044|ref|YP_876787.1|	-	0.2	11.1	0.0	4.7	6.8	0.0	2.4	2	0	0	2	2	2	0	Short	C-terminal	domain
Sec23_BS	PF08033.7	gi|118577045|ref|YP_876788.1|	-	0.11	12.9	0.0	0.2	12.1	0.0	1.4	1	0	0	1	1	1	0	Sec23/Sec24	beta-sandwich	domain
TFIIB	PF00382.14	gi|118577046|ref|YP_876789.1|	-	3.5e-32	110.0	6.5	7.2e-17	60.9	0.4	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|118577046|ref|YP_876789.1|	-	7.2e-11	41.2	0.6	1.2e-10	40.5	0.4	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|118577046|ref|YP_876789.1|	-	0.0011	18.0	1.4	0.002	17.2	1.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
HTH_11	PF08279.7	gi|118577046|ref|YP_876789.1|	-	0.0087	15.6	0.1	0.16	11.6	0.0	2.5	2	0	0	2	2	2	1	HTH	domain
Sigma70_r4	PF04545.11	gi|118577046|ref|YP_876789.1|	-	0.014	14.7	0.0	0.031	13.5	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_23	PF13384.1	gi|118577046|ref|YP_876789.1|	-	0.047	13.3	0.1	0.28	10.8	0.0	2.5	2	0	0	2	2	2	0	Homeodomain-like	domain
A2L_zn_ribbon	PF08792.5	gi|118577046|ref|YP_876789.1|	-	0.048	13.1	1.8	0.09	12.2	1.3	1.4	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DZR	PF12773.2	gi|118577046|ref|YP_876789.1|	-	0.072	12.9	0.9	0.16	11.8	0.6	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
Cyclin_N	PF00134.18	gi|118577046|ref|YP_876789.1|	-	0.13	11.8	0.2	1	8.9	0.0	2.0	2	0	0	2	2	2	0	Cyclin,	N-terminal	domain
Baculo_ME53	PF06061.6	gi|118577046|ref|YP_876789.1|	-	0.13	11.2	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	Baculoviridae	ME53
DUF2318	PF10080.4	gi|118577046|ref|YP_876789.1|	-	0.16	11.7	0.8	0.35	10.6	0.6	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
zinc_ribbon_2	PF13240.1	gi|118577046|ref|YP_876789.1|	-	0.21	11.1	3.1	0.83	9.2	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|118577046|ref|YP_876789.1|	-	0.69	9.6	3.7	1.5	8.5	0.6	2.4	3	0	0	3	3	3	0	Replication	factor-A	C	terminal	domain
Na_H_Exchanger	PF00999.16	gi|118577047|ref|YP_876790.1|	-	3e-39	134.6	48.3	4.1e-39	134.2	33.5	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
HNH_4	PF13395.1	gi|118577048|ref|YP_876791.1|	-	3.2e-15	55.4	0.0	6e-15	54.6	0.0	1.5	1	0	0	1	1	1	1	HNH	endonuclease
HNH	PF01844.18	gi|118577048|ref|YP_876791.1|	-	1.8e-07	30.8	1.5	2.5e-07	30.4	0.1	2.0	2	0	0	2	2	2	1	HNH	endonuclease
Hemerythrin	PF01814.18	gi|118577049|ref|YP_876792.1|	-	1.4e-11	44.7	11.6	6.5e-11	42.5	2.3	2.0	1	1	1	2	2	2	2	Hemerythrin	HHE	cation	binding	domain
HisKA	PF00512.20	gi|118577049|ref|YP_876792.1|	-	0.11	12.4	0.1	0.28	11.2	0.0	1.7	1	0	0	1	1	1	0	His	Kinase	A	(phospho-acceptor)	domain
APS_kinase	PF01583.15	gi|118577050|ref|YP_876793.1|	-	6.2e-46	155.9	0.0	7.2e-46	155.7	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.1	gi|118577050|ref|YP_876793.1|	-	8.8e-07	28.8	0.0	1.1e-06	28.6	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|118577050|ref|YP_876793.1|	-	1.1e-05	26.2	0.0	1.3e-05	26.0	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|118577050|ref|YP_876793.1|	-	3e-05	24.3	0.0	6.6e-05	23.2	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|118577050|ref|YP_876793.1|	-	0.0017	17.6	0.0	0.0022	17.2	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|118577050|ref|YP_876793.1|	-	0.0024	16.9	0.0	0.0035	16.4	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.1	gi|118577050|ref|YP_876793.1|	-	0.041	13.8	0.0	0.066	13.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Inositol_P	PF00459.20	gi|118577051|ref|YP_876794.1|	-	4.4e-45	154.0	0.0	5.5e-45	153.7	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|118577051|ref|YP_876794.1|	-	0.014	14.2	0.0	0.02	13.7	0.0	1.2	1	0	0	1	1	1	0	Fructose-1-6-bisphosphatase
TFIIB	PF00382.14	gi|118577054|ref|YP_876797.1|	-	1.7e-33	114.2	4.7	1.6e-16	59.8	0.1	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|118577054|ref|YP_876797.1|	-	2.4e-10	39.5	0.6	4.3e-10	38.7	0.4	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.11	gi|118577054|ref|YP_876797.1|	-	0.00034	19.8	0.1	0.012	14.8	0.0	2.7	2	0	0	2	2	2	1	Sigma-70,	region	4
Cyclin_C	PF02984.14	gi|118577054|ref|YP_876797.1|	-	0.00039	20.3	0.0	0.31	10.9	0.0	2.6	2	1	0	2	2	2	2	Cyclin,	C-terminal	domain
Cyclin_N	PF00134.18	gi|118577054|ref|YP_876797.1|	-	0.0012	18.4	0.1	0.05	13.1	0.0	2.1	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_AsnC-type	PF13404.1	gi|118577054|ref|YP_876797.1|	-	0.0063	16.0	0.0	0.84	9.2	0.0	2.9	3	0	0	3	3	3	1	AsnC-type	helix-turn-helix	domain
zf-ribbon_3	PF13248.1	gi|118577054|ref|YP_876797.1|	-	0.0076	15.4	1.4	0.015	14.4	1.0	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
HTH_23	PF13384.1	gi|118577054|ref|YP_876797.1|	-	0.016	14.8	0.2	0.086	12.5	0.0	2.3	2	0	0	2	2	2	0	Homeodomain-like	domain
Ribosomal_L37e	PF01907.14	gi|118577054|ref|YP_876797.1|	-	0.024	14.4	0.6	0.074	12.8	0.4	1.8	1	0	0	1	1	1	0	Ribosomal	protein	L37e
DZR	PF12773.2	gi|118577054|ref|YP_876797.1|	-	0.053	13.3	1.1	0.1	12.4	0.8	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
HTH_3	PF01381.17	gi|118577054|ref|YP_876797.1|	-	0.055	13.3	0.4	0.29	10.9	0.0	2.3	3	0	0	3	3	3	0	Helix-turn-helix
OrfB_Zn_ribbon	PF07282.6	gi|118577054|ref|YP_876797.1|	-	0.061	12.9	1.8	0.15	11.7	1.2	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
GCC2_GCC3	PF07699.8	gi|118577054|ref|YP_876797.1|	-	0.082	12.5	0.7	0.15	11.6	0.5	1.4	1	0	0	1	1	1	0	GCC2	and	GCC3
HTH_11	PF08279.7	gi|118577054|ref|YP_876797.1|	-	0.087	12.4	0.6	2.5	7.8	0.0	2.9	3	0	0	3	3	3	0	HTH	domain
MerR	PF00376.18	gi|118577054|ref|YP_876797.1|	-	0.12	11.9	0.5	2.1	7.9	0.0	2.6	2	0	0	2	2	2	0	MerR	family	regulatory	protein
A2L_zn_ribbon	PF08792.5	gi|118577054|ref|YP_876797.1|	-	0.4	10.1	3.0	0.9	9.0	2.1	1.5	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|118577054|ref|YP_876797.1|	-	0.45	10.0	5.6	0.43	10.1	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
LacI	PF00356.16	gi|118577054|ref|YP_876797.1|	-	0.49	10.0	2.2	1.1	8.9	0.1	2.6	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
zf-CCHC_5	PF14787.1	gi|118577054|ref|YP_876797.1|	-	4.2	6.9	5.3	2.2	7.8	0.6	2.6	3	0	0	3	3	3	0	GAG-polyprotein	viral	zinc-finger
Snf7	PF03357.16	gi|118577055|ref|YP_876798.1|	-	0.00048	19.5	5.1	0.00099	18.5	3.5	1.5	1	1	0	1	1	1	1	Snf7
DivIVA	PF05103.8	gi|118577055|ref|YP_876798.1|	-	0.27	11.2	2.4	2.7	8.0	0.1	2.3	2	0	0	2	2	2	0	DivIVA	protein
HTH_45	PF14947.1	gi|118577056|ref|YP_876799.1|	-	1.7e-09	37.3	0.0	2.4e-09	36.8	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|118577056|ref|YP_876799.1|	-	0.0013	19.0	0.0	0.0017	18.6	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|118577056|ref|YP_876799.1|	-	0.009	15.6	0.1	0.013	15.1	0.1	1.2	1	0	0	1	1	1	1	MarR	family
Mrr_N	PF14338.1	gi|118577056|ref|YP_876799.1|	-	0.028	14.5	0.0	0.046	13.7	0.0	1.5	1	0	0	1	1	1	0	Mrr	N-terminal	domain
Vhr1	PF04001.8	gi|118577056|ref|YP_876799.1|	-	0.052	13.4	0.1	0.089	12.7	0.0	1.4	1	0	0	1	1	1	0	Transcription	factor	Vhr1
PadR	PF03551.9	gi|118577056|ref|YP_876799.1|	-	0.055	13.2	0.0	0.089	12.5	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF4364	PF14277.1	gi|118577056|ref|YP_876799.1|	-	0.085	12.4	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
HTH_24	PF13412.1	gi|118577057|ref|YP_876800.1|	-	0.001	18.4	0.1	0.0026	17.0	0.0	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|118577057|ref|YP_876800.1|	-	0.012	15.0	0.0	0.024	14.0	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
TrmB	PF01978.14	gi|118577057|ref|YP_876800.1|	-	0.037	13.7	0.0	0.069	12.8	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|118577057|ref|YP_876800.1|	-	0.051	13.2	0.2	0.39	10.4	0.0	2.2	1	1	1	2	2	2	0	MarR	family
MarR_2	PF12802.2	gi|118577057|ref|YP_876800.1|	-	0.053	13.1	0.0	0.14	11.8	0.0	1.8	1	0	0	1	1	1	0	MarR	family
Cytochrom_B562	PF07361.6	gi|118577058|ref|YP_876801.1|	-	0.093	13.1	2.7	17	5.9	0.1	3.7	3	1	2	5	5	5	0	Cytochrome	b562
CysG_dimeriser	PF10414.4	gi|118577058|ref|YP_876801.1|	-	4.4	6.8	10.5	0.39	10.2	0.2	3.4	3	0	0	3	3	3	0	Sirohaem	synthase	dimerisation	region
YtxH	PF12732.2	gi|118577061|ref|YP_876804.1|	-	0.21	11.9	1.4	0.21	11.9	1.0	2.3	2	1	0	2	2	2	0	YtxH-like	protein
DUF2892	PF11127.3	gi|118577061|ref|YP_876804.1|	-	0.43	10.4	4.6	0.56	10.0	3.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
Fer4_14	PF13394.1	gi|118577062|ref|YP_876805.1|	-	4.8e-15	55.6	0.0	6.9e-15	55.1	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|118577062|ref|YP_876805.1|	-	5.3e-13	49.2	0.0	8e-13	48.6	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|118577062|ref|YP_876805.1|	-	2.7e-11	43.9	0.1	4.4e-11	43.2	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
GTP_cyclohydroI	PF01227.17	gi|118577063|ref|YP_876806.1|	-	4.7e-63	211.6	0.0	5.4e-63	211.5	0.0	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
QueF	PF14489.1	gi|118577063|ref|YP_876806.1|	-	0.0028	17.5	0.0	0.0044	16.9	0.0	1.3	1	0	0	1	1	1	1	QueF-like	protein
Corona_S2	PF01601.11	gi|118577064|ref|YP_876807.1|	-	0.077	11.0	0.2	0.085	10.9	0.1	1.1	1	0	0	1	1	1	0	Coronavirus	S2	glycoprotein
SPW	PF03779.9	gi|118577064|ref|YP_876807.1|	-	1.8	8.0	8.7	0.088	12.1	1.4	2.1	2	0	0	2	2	2	0	SPW	repeat
QueC	PF06508.8	gi|118577065|ref|YP_876808.1|	-	1.4e-46	158.4	0.0	1.6e-46	158.2	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|118577065|ref|YP_876808.1|	-	0.0021	17.5	0.0	0.0031	17.0	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ATP_bind_3	PF01171.15	gi|118577065|ref|YP_876808.1|	-	0.021	14.3	0.0	0.03	13.7	0.0	1.3	1	0	0	1	1	1	0	PP-loop	family
GHMP_kinases_N	PF00288.21	gi|118577066|ref|YP_876809.1|	-	6e-16	58.2	4.4	6e-16	58.2	3.1	1.9	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|118577066|ref|YP_876809.1|	-	6.1e-09	35.9	0.6	1.7e-08	34.5	0.4	1.8	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
Calici_MSP	PF05752.6	gi|118577066|ref|YP_876809.1|	-	0.053	13.1	1.0	0.093	12.3	0.2	1.7	2	0	0	2	2	2	0	Calicivirus	minor	structural	protein
ATP_bind_1	PF03029.12	gi|118577067|ref|YP_876810.1|	-	1.5e-53	181.8	0.0	1.8e-53	181.5	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
CbiA	PF01656.18	gi|118577067|ref|YP_876810.1|	-	0.0092	15.4	0.0	0.013	14.9	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArgK	PF03308.11	gi|118577067|ref|YP_876810.1|	-	0.048	12.4	0.0	0.081	11.6	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
LigB	PF02900.13	gi|118577067|ref|YP_876810.1|	-	0.069	12.1	0.0	0.36	9.7	0.0	1.9	1	1	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
UPF0104	PF03706.8	gi|118577068|ref|YP_876811.1|	-	7.2e-24	84.5	18.7	9.6e-24	84.1	12.9	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
SIS	PF01380.17	gi|118577068|ref|YP_876811.1|	-	0.087	12.4	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	SIS	domain
DUF3353	PF11833.3	gi|118577068|ref|YP_876811.1|	-	0.52	9.7	6.1	1.1	8.7	4.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
adh_short	PF00106.20	gi|118577069|ref|YP_876812.1|	-	3.1e-33	115.0	1.4	3.9e-33	114.7	0.9	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|118577069|ref|YP_876812.1|	-	2.6e-13	50.3	0.1	3.5e-13	49.9	0.1	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|118577069|ref|YP_876812.1|	-	6e-13	48.8	0.7	8.4e-13	48.3	0.5	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|118577069|ref|YP_876812.1|	-	0.0005	20.1	0.4	0.0012	18.8	0.3	1.9	1	1	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|118577069|ref|YP_876812.1|	-	0.0036	16.7	0.1	0.0047	16.4	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Eno-Rase_NADH_b	PF12242.3	gi|118577069|ref|YP_876812.1|	-	0.0043	16.7	0.9	0.013	15.2	0.6	1.8	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DFP	PF04127.10	gi|118577069|ref|YP_876812.1|	-	0.013	15.1	0.5	0.032	13.8	0.4	1.6	1	1	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
DUF1660	PF07874.6	gi|118577070|ref|YP_876813.1|	-	0.021	15.0	1.4	0.026	14.8	0.8	1.3	1	1	0	1	1	1	0	Prophage	protein	(DUF1660)
Ribosomal_L32p	PF01783.18	gi|118577070|ref|YP_876813.1|	-	0.1	12.7	0.2	0.23	11.6	0.0	1.7	2	0	0	2	2	2	0	Ribosomal	L32p	protein	family
Glyco_trans_1_3	PF13528.1	gi|118577071|ref|YP_876814.1|	-	8.6e-07	28.4	0.0	0.00022	20.5	0.0	2.2	2	0	0	2	2	2	2	Glycosyl	transferase	family	1
PAPS_reduct	PF01507.14	gi|118577073|ref|YP_876816.1|	-	9.1e-42	142.8	0.0	1.1e-41	142.5	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP-sulfurylase	PF01747.12	gi|118577074|ref|YP_876817.1|	-	3.9e-87	291.0	0.1	5e-87	290.7	0.1	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|118577074|ref|YP_876817.1|	-	8.7e-45	151.9	0.0	1.5e-44	151.2	0.0	1.4	1	0	0	1	1	1	1	PUA-like	domain
HhH-GPD	PF00730.20	gi|118577076|ref|YP_876819.1|	-	2.9e-23	82.2	0.0	4.7e-23	81.5	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|118577076|ref|YP_876819.1|	-	3.7e-08	32.6	0.0	8.1e-08	31.5	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF2400	PF09674.5	gi|118577076|ref|YP_876819.1|	-	0.0049	16.5	0.0	0.0098	15.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2400)
EndIII_4Fe-2S	PF10576.4	gi|118577076|ref|YP_876819.1|	-	0.0095	16.0	1.9	0.025	14.7	1.3	1.8	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH_5	PF14520.1	gi|118577076|ref|YP_876819.1|	-	0.013	15.6	0.0	0.073	13.2	0.0	2.0	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
DUF521	PF04412.8	gi|118577077|ref|YP_876820.1|	-	9.5e-106	353.7	0.1	2.3e-105	352.4	0.0	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
DUF126	PF01989.11	gi|118577078|ref|YP_876821.1|	-	6.2e-32	109.1	0.1	7.2e-32	108.9	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF126
GATase_2	PF00310.16	gi|118577080|ref|YP_876823.1|	-	7e-20	71.0	0.0	8.3e-11	41.1	0.0	3.2	3	0	0	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|118577080|ref|YP_876823.1|	-	8.4e-17	61.3	0.0	3.7e-16	59.2	0.0	2.0	3	0	0	3	3	3	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|118577080|ref|YP_876823.1|	-	6.1e-14	51.8	0.0	1.3e-13	50.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_7	PF13537.1	gi|118577080|ref|YP_876823.1|	-	5.7e-13	48.7	0.0	1e-12	47.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|118577080|ref|YP_876823.1|	-	2e-05	23.4	0.0	3.2e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF411	PF04214.8	gi|118577080|ref|YP_876823.1|	-	0.1	12.0	0.1	0.41	10.1	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF
PRTase_3	PF15610.1	gi|118577080|ref|YP_876823.1|	-	0.11	11.3	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	PRTase	ComF-like
AIRS_C	PF02769.17	gi|118577081|ref|YP_876824.1|	-	2.7e-47	160.6	2.3	3.5e-28	98.5	0.6	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|118577081|ref|YP_876824.1|	-	1.8e-39	133.8	4.9	1.4e-21	76.5	0.2	3.2	3	1	0	3	3	3	2	AIR	synthase	related	protein,	N-terminal	domain
GATase_5	PF13507.1	gi|118577082|ref|YP_876825.1|	-	1.9e-41	141.6	0.0	3.2e-41	140.9	0.0	1.3	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|118577082|ref|YP_876825.1|	-	1.3e-07	31.3	0.0	9.3e-07	28.5	0.0	2.0	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|118577082|ref|YP_876825.1|	-	1.4e-07	31.1	0.0	2.1e-07	30.5	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|118577082|ref|YP_876825.1|	-	5.6e-07	29.1	0.0	7.9e-07	28.6	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|118577082|ref|YP_876825.1|	-	0.00027	20.2	0.0	0.00043	19.5	0.0	1.2	1	0	0	1	1	1	1	Putative	amidotransferase
Peptidase_C26	PF07722.8	gi|118577082|ref|YP_876825.1|	-	0.0043	16.5	0.0	0.0086	15.5	0.0	1.4	1	0	0	1	1	1	1	Peptidase	C26
UDG	PF03167.14	gi|118577083|ref|YP_876826.1|	-	1.8e-28	98.9	0.0	2.2e-28	98.6	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
JmjN	PF02375.12	gi|118577083|ref|YP_876826.1|	-	0.11	12.0	0.4	0.33	10.5	0.3	1.8	1	0	0	1	1	1	0	jmjN	domain
Glycos_transf_2	PF00535.21	gi|118577084|ref|YP_876827.1|	-	7.4e-28	97.3	0.0	1.3e-27	96.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GtrA	PF04138.9	gi|118577084|ref|YP_876827.1|	-	4.4e-20	71.7	7.5	4.4e-19	68.5	5.8	2.0	1	1	0	1	1	1	1	GtrA-like	protein
Glyco_tranf_2_3	PF13641.1	gi|118577084|ref|YP_876827.1|	-	9.2e-10	38.6	0.0	1.9e-09	37.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|118577084|ref|YP_876827.1|	-	0.0012	18.1	0.0	0.0027	16.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
NTP_transf_3	PF12804.2	gi|118577084|ref|YP_876827.1|	-	0.005	16.9	0.0	0.011	15.8	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Snf7	PF03357.16	gi|118577085|ref|YP_876828.1|	-	0.00059	19.2	2.7	0.0011	18.3	1.9	1.5	1	1	0	1	1	1	1	Snf7
TP_methylase	PF00590.15	gi|118577086|ref|YP_876829.1|	-	6.3e-42	143.6	0.4	7.7e-42	143.3	0.3	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Radical_SAM	PF04055.16	gi|118577086|ref|YP_876829.1|	-	0.021	14.9	0.0	0.07	13.2	0.0	1.8	2	1	0	2	2	2	0	Radical	SAM	superfamily
TP_methylase	PF00590.15	gi|118577087|ref|YP_876830.1|	-	1.1e-48	165.7	0.0	1.2e-48	165.6	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Methyltransf_18	PF12847.2	gi|118577088|ref|YP_876831.1|	-	1.5e-16	60.9	0.1	2.2e-16	60.4	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|118577088|ref|YP_876831.1|	-	1.2e-13	50.8	0.0	1.5e-13	50.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|118577088|ref|YP_876831.1|	-	5.8e-11	42.0	0.2	7.7e-11	41.6	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_26	PF13659.1	gi|118577088|ref|YP_876831.1|	-	7.5e-11	42.0	0.4	1.7e-10	40.9	0.1	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|118577088|ref|YP_876831.1|	-	1.5e-10	41.0	0.0	1.8e-10	40.6	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|118577088|ref|YP_876831.1|	-	4.9e-09	35.7	0.0	1.1e-08	34.6	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|118577088|ref|YP_876831.1|	-	4.5e-07	29.6	0.0	7.7e-07	28.8	0.0	1.4	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|118577088|ref|YP_876831.1|	-	7e-07	29.5	0.0	1.2e-06	28.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|118577088|ref|YP_876831.1|	-	2.9e-06	27.6	0.0	7.1e-06	26.4	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|118577088|ref|YP_876831.1|	-	4e-06	26.5	0.0	5.1e-06	26.2	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_11	PF08241.7	gi|118577088|ref|YP_876831.1|	-	4.1e-06	27.1	0.0	7.4e-06	26.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|118577088|ref|YP_876831.1|	-	1.6e-05	24.7	0.0	2.5e-05	24.0	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|118577088|ref|YP_876831.1|	-	9.3e-05	21.5	0.0	0.00012	21.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Cons_hypoth95	PF03602.10	gi|118577088|ref|YP_876831.1|	-	9.4e-05	21.8	0.0	0.00013	21.3	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
FtsJ	PF01728.14	gi|118577088|ref|YP_876831.1|	-	0.00014	21.9	0.0	0.0022	18.0	0.0	2.0	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Ubie_methyltran	PF01209.13	gi|118577088|ref|YP_876831.1|	-	0.00017	20.8	0.0	0.00022	20.4	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_24	PF13578.1	gi|118577088|ref|YP_876831.1|	-	0.00017	22.3	0.0	0.00033	21.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|118577088|ref|YP_876831.1|	-	0.00024	20.2	0.0	0.00034	19.7	0.0	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_3	PF01596.12	gi|118577088|ref|YP_876831.1|	-	0.0003	19.9	0.0	0.00047	19.2	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_4	PF02390.12	gi|118577088|ref|YP_876831.1|	-	0.00035	19.6	0.0	0.00059	18.9	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_15	PF09445.5	gi|118577088|ref|YP_876831.1|	-	0.00086	18.8	0.0	0.0012	18.4	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Nol1_Nop2_Fmu	PF01189.12	gi|118577088|ref|YP_876831.1|	-	0.00091	18.6	0.0	0.0012	18.2	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
FmrO	PF07091.6	gi|118577088|ref|YP_876831.1|	-	0.0022	17.0	0.0	0.0031	16.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
GCD14	PF08704.5	gi|118577088|ref|YP_876831.1|	-	0.006	16.1	0.0	0.0069	15.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
N6_Mtase	PF02384.11	gi|118577088|ref|YP_876831.1|	-	0.024	13.7	0.0	0.032	13.3	0.0	1.1	1	0	0	1	1	1	0	N-6	DNA	Methylase
Methyltransf_32	PF13679.1	gi|118577088|ref|YP_876831.1|	-	0.036	13.7	0.0	0.051	13.2	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
GidB	PF02527.10	gi|118577088|ref|YP_876831.1|	-	0.06	12.4	0.0	0.085	11.9	0.0	1.1	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
DOT1	PF08123.8	gi|118577088|ref|YP_876831.1|	-	0.17	11.1	0.0	0.4	9.9	0.0	1.6	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
Rab5ip	PF07019.7	gi|118577089|ref|YP_876832.1|	-	0.00028	20.9	5.0	0.00046	20.2	3.4	1.4	1	1	0	1	1	1	1	Rab5-interacting	protein	(Rab5ip)
ATP-synt_8	PF00895.15	gi|118577089|ref|YP_876832.1|	-	0.13	12.5	1.5	2.2	8.5	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	protein	8
DUF202	PF02656.10	gi|118577089|ref|YP_876832.1|	-	0.19	11.9	5.5	0.16	12.1	0.8	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
PspC	PF04024.7	gi|118577089|ref|YP_876832.1|	-	2.6	7.5	6.9	7	6.1	4.8	1.7	1	1	0	1	1	1	0	PspC	domain
FbpA	PF05833.6	gi|118577090|ref|YP_876833.1|	-	2.5e-37	128.5	0.0	3.2e-37	128.1	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|118577090|ref|YP_876833.1|	-	2.6e-15	56.0	0.0	4.8e-15	55.2	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
AMMECR1	PF01871.12	gi|118577093|ref|YP_876836.1|	-	1.6e-56	190.1	0.0	1.9e-56	189.8	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
tRNA-synt_2b	PF00587.20	gi|118577094|ref|YP_876837.1|	-	1.4e-43	148.4	0.0	2.1e-43	147.9	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|118577094|ref|YP_876837.1|	-	1.2e-15	57.1	0.1	2.2e-15	56.3	0.0	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
AP_endonuc_2	PF01261.19	gi|118577095|ref|YP_876838.1|	-	4.2e-31	107.9	0.0	5.4e-29	101.0	0.0	2.0	2	0	0	2	2	2	2	Xylose	isomerase-like	TIM	barrel
DNA_primase_lrg	PF04104.9	gi|118577096|ref|YP_876839.1|	-	2.5e-20	72.8	0.0	5.9e-20	71.6	0.0	1.5	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DNA_primase_S	PF01896.14	gi|118577097|ref|YP_876840.1|	-	3.7e-14	52.7	0.0	8.3e-14	51.6	0.0	1.5	2	0	0	2	2	2	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
NMD3	PF04981.8	gi|118577097|ref|YP_876840.1|	-	0.77	8.8	3.7	0.53	9.3	0.6	1.9	2	0	0	2	2	2	0	NMD3	family
UPF0182	PF03699.8	gi|118577098|ref|YP_876841.1|	-	2.1e-31	108.6	6.4	2.1e-31	108.6	4.4	2.4	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0182)
GATase	PF00117.23	gi|118577099|ref|YP_876842.1|	-	1.7e-18	66.7	0.0	2e-18	66.5	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118577099|ref|YP_876842.1|	-	3.8e-11	42.8	0.1	2.5e-09	36.9	0.1	2.0	1	1	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.9	gi|118577099|ref|YP_876842.1|	-	0.049	13.2	0.3	0.52	9.8	0.2	2.0	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.14	gi|118577099|ref|YP_876842.1|	-	0.11	12.1	0.0	0.34	10.5	0.0	1.7	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
TPR_11	PF13414.1	gi|118577100|ref|YP_876843.1|	-	4.3e-21	74.3	0.9	4.3e-11	42.2	0.5	2.2	2	0	0	2	2	2	2	TPR	repeat
TPR_2	PF07719.12	gi|118577100|ref|YP_876843.1|	-	6.8e-13	47.4	3.8	8.1e-06	25.3	0.2	4.5	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118577100|ref|YP_876843.1|	-	1.7e-12	46.4	0.5	6e-06	26.0	0.1	3.6	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118577100|ref|YP_876843.1|	-	2.5e-12	45.8	4.8	5.7e-06	25.7	0.1	4.6	4	1	0	4	4	4	3	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|118577100|ref|YP_876843.1|	-	2.5e-09	37.5	0.2	3e-05	24.5	0.2	2.7	1	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118577100|ref|YP_876843.1|	-	1.3e-08	34.6	1.5	0.00011	22.0	0.0	2.7	1	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118577100|ref|YP_876843.1|	-	1.7e-08	34.2	0.3	2.4e-07	30.5	0.0	2.7	3	1	0	3	3	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118577100|ref|YP_876843.1|	-	8.6e-08	32.1	0.2	0.022	15.3	0.0	3.7	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118577100|ref|YP_876843.1|	-	1.1e-05	25.6	0.0	0.18	12.1	0.0	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|118577100|ref|YP_876843.1|	-	0.0017	18.2	0.4	0.006	16.4	0.1	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118577100|ref|YP_876843.1|	-	0.0065	16.1	1.8	0.61	10.0	0.3	3.7	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118577100|ref|YP_876843.1|	-	0.0085	15.8	0.2	0.17	11.7	0.0	2.9	3	1	0	3	3	3	1	Tetratricopeptide	repeat
Peptidase_C39_2	PF13529.1	gi|118577100|ref|YP_876843.1|	-	0.014	15.7	0.0	0.046	14.0	0.0	1.8	1	1	0	1	1	1	0	Peptidase_C39	like	family
TPR_4	PF07721.9	gi|118577100|ref|YP_876843.1|	-	0.14	12.6	0.3	4	8.1	0.0	3.4	3	0	0	3	3	3	0	Tetratricopeptide	repeat
zf-ribbon_3	PF13248.1	gi|118577101|ref|YP_876844.1|	-	1.1e-05	24.4	2.8	2.3e-05	23.4	1.9	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|118577101|ref|YP_876844.1|	-	1.9e-05	23.9	2.2	2.7e-05	23.3	1.5	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|118577101|ref|YP_876844.1|	-	7.3e-05	22.1	1.5	0.00015	21.1	1.1	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|118577101|ref|YP_876844.1|	-	0.00033	20.6	0.6	0.36	10.8	0.1	2.1	2	0	0	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
CpXC	PF14353.1	gi|118577101|ref|YP_876844.1|	-	0.00063	19.7	1.9	0.0045	16.9	0.0	2.0	1	1	1	2	2	2	1	CpXC	protein
DZR	PF12773.2	gi|118577101|ref|YP_876844.1|	-	0.0013	18.4	1.1	0.0022	17.7	0.7	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
Ogr_Delta	PF04606.7	gi|118577101|ref|YP_876844.1|	-	0.0016	18.0	1.4	1.3	8.7	0.0	2.3	2	0	0	2	2	2	2	Ogr/Delta-like	zinc	finger
OrfB_Zn_ribbon	PF07282.6	gi|118577101|ref|YP_876844.1|	-	0.0018	17.9	1.1	0.0028	17.2	0.7	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF35_N	PF12172.3	gi|118577101|ref|YP_876844.1|	-	0.0035	17.2	2.0	0.62	10.0	0.2	2.2	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_4	PF13717.1	gi|118577101|ref|YP_876844.1|	-	0.0056	16.3	2.8	0.14	11.8	2.0	2.1	1	1	0	1	1	1	1	zinc-ribbon	domain
DUF2387	PF09526.5	gi|118577101|ref|YP_876844.1|	-	0.0057	16.5	1.7	0.0083	16.0	1.2	1.3	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_5	PF13719.1	gi|118577101|ref|YP_876844.1|	-	0.0064	16.0	2.8	0.1	12.1	2.0	2.1	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|118577101|ref|YP_876844.1|	-	0.0074	16.5	1.5	0.42	10.9	0.2	2.1	2	0	0	2	2	2	1	Zinc-finger	double	domain
IBR	PF01485.16	gi|118577101|ref|YP_876844.1|	-	0.0093	15.8	0.6	0.014	15.2	0.4	1.3	1	0	0	1	1	1	1	IBR	domain
Zn_Tnp_IS91	PF14319.1	gi|118577101|ref|YP_876844.1|	-	0.0095	15.4	0.1	0.01	15.3	0.0	1.1	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
HypA	PF01155.14	gi|118577101|ref|YP_876844.1|	-	0.0099	15.5	0.3	0.01	15.5	0.2	1.2	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DNA_ligase_ZBD	PF03119.11	gi|118577101|ref|YP_876844.1|	-	0.012	15.3	2.9	0.39	10.4	0.4	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Prok-RING_1	PF14446.1	gi|118577101|ref|YP_876844.1|	-	0.014	15.1	1.6	0.02	14.5	1.1	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Ribosomal_S27e	PF01667.12	gi|118577101|ref|YP_876844.1|	-	0.018	14.5	0.7	0.026	14.0	0.5	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S27
TerY-C	PF15616.1	gi|118577101|ref|YP_876844.1|	-	0.023	14.6	0.3	0.027	14.3	0.2	1.2	1	0	0	1	1	1	0	TerY-C	metal	binding	domain
Zn_ribbon_recom	PF13408.1	gi|118577101|ref|YP_876844.1|	-	0.024	14.8	0.3	1.6	9.0	0.0	2.2	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Rota_NS26	PF01525.11	gi|118577101|ref|YP_876844.1|	-	0.027	14.2	0.1	0.031	14.0	0.0	1.0	1	0	0	1	1	1	0	Rotavirus	NS26
DUF1610	PF07754.6	gi|118577101|ref|YP_876844.1|	-	0.037	14.1	3.2	2.7	8.1	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Zn_Tnp_IS1595	PF12760.2	gi|118577101|ref|YP_876844.1|	-	0.049	13.4	7.2	0.09	12.5	0.6	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
DUF329	PF03884.9	gi|118577101|ref|YP_876844.1|	-	0.054	13.0	1.7	3.1	7.4	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF329)
Zn-ribbon_8	PF09723.5	gi|118577101|ref|YP_876844.1|	-	0.055	13.4	5.0	1.2	9.1	3.5	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|118577101|ref|YP_876844.1|	-	0.058	13.7	2.2	0.21	11.9	1.5	1.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Mu-like_Com	PF10122.4	gi|118577101|ref|YP_876844.1|	-	0.07	12.1	0.3	0.099	11.7	0.2	1.3	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
DUF164	PF02591.10	gi|118577101|ref|YP_876844.1|	-	0.077	12.8	3.2	3.8	7.4	0.3	2.3	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|118577101|ref|YP_876844.1|	-	0.087	12.5	0.3	0.18	11.5	0.2	1.5	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF2072	PF09845.4	gi|118577101|ref|YP_876844.1|	-	0.091	12.6	0.2	0.099	12.5	0.1	1.1	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
UPF0547	PF10571.4	gi|118577101|ref|YP_876844.1|	-	0.097	12.3	12.3	2	8.2	8.6	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C2H2	PF00096.21	gi|118577101|ref|YP_876844.1|	-	0.1	13.0	1.1	12	6.4	0.0	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-NADH-PPase	PF09297.6	gi|118577101|ref|YP_876844.1|	-	0.11	12.0	4.5	0.46	10.0	3.1	1.8	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|118577101|ref|YP_876844.1|	-	0.11	12.4	1.5	5.5	6.9	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
zf-C4_Topoisom	PF01396.14	gi|118577101|ref|YP_876844.1|	-	0.11	11.9	1.9	4.1	6.9	0.1	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF2225	PF09986.4	gi|118577101|ref|YP_876844.1|	-	0.12	11.8	0.9	0.16	11.3	0.0	1.5	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
zf-ZPR1	PF03367.8	gi|118577101|ref|YP_876844.1|	-	0.13	11.4	1.2	0.49	9.5	0.8	1.8	1	1	0	1	1	1	0	ZPR1	zinc-finger	domain
DNA_RNApol_7kD	PF03604.8	gi|118577101|ref|YP_876844.1|	-	0.15	11.5	4.3	0.89	9.0	3.0	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
PhnA_Zn_Ribbon	PF08274.7	gi|118577101|ref|YP_876844.1|	-	0.17	11.6	4.2	0.5	10.2	2.9	1.7	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
Sgf11	PF08209.6	gi|118577101|ref|YP_876844.1|	-	0.22	10.8	2.9	4.7	6.6	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-RING_3	PF14369.1	gi|118577101|ref|YP_876844.1|	-	0.23	11.4	5.9	0.71	9.9	0.3	2.2	1	1	1	2	2	2	0	zinc-finger
zf-FPG_IleRS	PF06827.9	gi|118577101|ref|YP_876844.1|	-	0.32	10.6	4.8	0.6	9.8	3.3	1.5	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Nudix_N_2	PF14803.1	gi|118577101|ref|YP_876844.1|	-	0.35	10.6	4.5	13	5.5	3.1	2.1	1	1	0	1	1	1	0	Nudix	N-terminal
Auto_anti-p27	PF06677.7	gi|118577101|ref|YP_876844.1|	-	0.39	10.5	5.3	0.26	11.0	2.3	1.7	2	1	0	2	2	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF3797	PF12677.2	gi|118577101|ref|YP_876844.1|	-	0.42	10.2	2.2	1.8	8.2	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Cys_rich_CPCC	PF14206.1	gi|118577101|ref|YP_876844.1|	-	0.44	10.1	2.4	1	8.9	1.7	1.7	1	1	0	1	1	1	0	Cysteine-rich	CPCC
DUF2296	PF10058.4	gi|118577101|ref|YP_876844.1|	-	0.54	10.0	3.0	3	7.6	0.1	2.1	1	1	2	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-Mss51	PF13824.1	gi|118577101|ref|YP_876844.1|	-	0.88	9.4	3.4	17	5.3	0.1	2.2	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Ribosomal_L32p	PF01783.18	gi|118577101|ref|YP_876844.1|	-	0.9	9.7	3.0	3.1	8.0	2.1	1.8	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
zf-tcix	PF14952.1	gi|118577101|ref|YP_876844.1|	-	0.95	8.8	3.6	11	5.4	0.2	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-RING_4	PF14570.1	gi|118577101|ref|YP_876844.1|	-	3	7.4	5.4	10	5.7	0.1	2.2	1	1	1	2	2	2	0	RING/Ubox	like	zinc-binding	domain
TFIIS_C	PF01096.13	gi|118577101|ref|YP_876844.1|	-	7.2	6.3	5.8	15	5.2	0.3	2.2	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Ribosomal_S6e	PF01092.14	gi|118577103|ref|YP_876846.1|	-	3.9e-18	65.2	0.2	4.8e-18	65.0	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.22	gi|118577104|ref|YP_876847.1|	-	2.5e-34	118.3	0.0	4e-34	117.7	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|118577104|ref|YP_876847.1|	-	1.2e-22	79.7	0.2	1.5e-21	76.2	0.0	2.3	2	0	0	2	2	2	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|118577104|ref|YP_876847.1|	-	4.5e-05	23.4	0.7	0.00016	21.6	0.3	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|118577104|ref|YP_876847.1|	-	0.013	15.4	0.0	0.023	14.6	0.0	1.4	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
PhnA_Zn_Ribbon	PF08274.7	gi|118577104|ref|YP_876847.1|	-	0.028	14.1	0.4	0.29	10.9	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Zn-ribbon_8	PF09723.5	gi|118577104|ref|YP_876847.1|	-	0.088	12.7	2.4	21	5.1	0.1	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
CpXC	PF14353.1	gi|118577104|ref|YP_876847.1|	-	0.14	12.1	0.0	3.8	7.4	0.0	2.2	2	0	0	2	2	2	0	CpXC	protein
Fcf1	PF04900.7	gi|118577105|ref|YP_876848.1|	-	1.2e-07	31.7	0.0	1.4e-07	31.4	0.0	1.1	1	0	0	1	1	1	1	Fcf1
DUF188	PF02639.9	gi|118577105|ref|YP_876848.1|	-	0.089	12.2	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
PBP	PF01161.15	gi|118577106|ref|YP_876849.1|	-	1e-32	112.9	0.0	1.2e-32	112.7	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
STT3	PF02516.9	gi|118577108|ref|YP_876851.1|	-	9.5e-32	110.5	21.1	1.9e-31	109.5	14.7	1.4	1	0	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
PMT_2	PF13231.1	gi|118577108|ref|YP_876851.1|	-	1.5e-06	28.2	12.8	1.5e-06	28.2	8.8	3.5	3	2	1	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
CbiD	PF01888.12	gi|118577109|ref|YP_876852.1|	-	1.1e-72	244.2	2.6	1.3e-72	243.8	1.8	1.1	1	0	0	1	1	1	1	CbiD
CbiG_N	PF11760.3	gi|118577110|ref|YP_876853.1|	-	1.7e-30	104.5	0.3	2.6e-30	103.9	0.2	1.3	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|118577110|ref|YP_876853.1|	-	8.1e-30	103.5	0.0	1.7e-29	102.5	0.0	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|118577110|ref|YP_876853.1|	-	3.3e-15	56.0	0.0	1.1e-14	54.3	0.0	1.9	2	0	0	2	2	2	1	Cobalamin	biosynthesis	central	region
SpoU_sub_bind	PF08032.7	gi|118577110|ref|YP_876853.1|	-	0.14	12.3	0.0	0.3	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
CbiX	PF01903.12	gi|118577111|ref|YP_876854.1|	-	1.4e-33	115.1	0.0	1e-17	64.1	0.0	2.1	2	0	0	2	2	2	2	CbiX
Ferrochelatase	PF00762.14	gi|118577111|ref|YP_876854.1|	-	0.024	13.5	0.0	0.33	9.8	0.0	2.0	1	1	0	1	1	1	0	Ferrochelatase
CbiC	PF02570.10	gi|118577112|ref|YP_876855.1|	-	7.3e-65	218.1	0.1	8.1e-65	217.9	0.1	1.0	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
GATase_3	PF07685.9	gi|118577113|ref|YP_876856.1|	-	8.4e-31	106.7	0.2	1.2e-30	106.1	0.1	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|118577113|ref|YP_876856.1|	-	2.9e-09	36.6	0.0	7e-09	35.3	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|118577113|ref|YP_876856.1|	-	4.9e-08	32.8	0.0	7.2e-08	32.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SNO	PF01174.14	gi|118577113|ref|YP_876856.1|	-	0.18	11.4	0.0	0.28	10.8	0.0	1.2	1	0	0	1	1	1	0	SNO	glutamine	amidotransferase	family
Lactonase	PF10282.4	gi|118577114|ref|YP_876857.1|	-	1.3e-10	40.8	2.3	0.0014	17.8	0.0	4.4	3	2	1	4	4	4	2	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118577114|ref|YP_876857.1|	-	1.5e-09	37.6	6.9	0.03	13.7	0.0	8.1	5	3	0	8	8	8	2	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|118577114|ref|YP_876857.1|	-	5.4e-07	29.5	0.0	0.15	12.0	0.0	7.0	8	1	1	9	9	9	1	Arylesterase
Str_synth	PF03088.11	gi|118577114|ref|YP_876857.1|	-	0.036	14.1	0.0	67	3.6	0.0	4.8	5	0	0	5	5	5	0	Strictosidine	synthase
NHL	PF01436.16	gi|118577114|ref|YP_876857.1|	-	0.19	11.7	8.3	70	3.6	0.0	6.7	7	0	0	7	7	7	0	NHL	repeat
Trypan_PARP	PF05887.6	gi|118577114|ref|YP_876857.1|	-	1.2	8.9	16.6	2.7	7.7	11.5	1.5	1	0	0	1	1	1	0	Procyclic	acidic	repetitive	protein	(PARP)
Lactonase	PF10282.4	gi|118577115|ref|YP_876858.1|	-	2e-14	53.4	1.3	5.1e-05	22.5	0.0	4.2	5	0	0	5	5	5	3	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|118577115|ref|YP_876858.1|	-	1.4e-10	41.0	3.7	0.24	10.7	0.0	7.1	2	2	4	8	8	8	6	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|118577115|ref|YP_876858.1|	-	2.9e-05	23.9	0.0	0.35	10.8	0.0	5.3	5	0	0	5	5	5	1	Arylesterase
CobA_CobO_BtuR	PF02572.10	gi|118577116|ref|YP_876859.1|	-	1.3e-59	200.6	0.0	1.4e-59	200.5	0.0	1.0	1	0	0	1	1	1	1	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
CbiA	PF01656.18	gi|118577116|ref|YP_876859.1|	-	0.0018	17.7	0.5	0.0028	17.0	0.3	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.12	gi|118577116|ref|YP_876859.1|	-	0.0071	15.7	1.4	0.58	9.5	0.0	2.3	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|118577116|ref|YP_876859.1|	-	0.073	12.8	0.1	0.15	11.8	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|118577116|ref|YP_876859.1|	-	0.24	10.7	1.8	0.34	10.2	1.1	1.6	1	1	0	1	1	1	0	AAA	domain
EIF_2_alpha	PF07541.7	gi|118577117|ref|YP_876860.1|	-	7.5e-22	77.2	0.0	1.7e-21	76.0	0.0	1.6	1	1	1	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|118577117|ref|YP_876860.1|	-	7.7e-12	45.1	0.0	1.7e-11	44.0	0.0	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
EXOSC1	PF10447.4	gi|118577117|ref|YP_876860.1|	-	0.049	13.5	0.0	0.31	11.0	0.0	2.1	2	0	0	2	2	2	0	Exosome	component	EXOSC1/CSL4
NAD_binding_10	PF13460.1	gi|118577118|ref|YP_876861.1|	-	3.4e-09	36.9	0.0	4.9e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
S-AdoMet_synt_C	PF02773.11	gi|118577119|ref|YP_876862.1|	-	3.7e-67	224.3	0.1	5.9e-67	223.6	0.1	1.3	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	C-terminal	domain
S-AdoMet_synt_M	PF02772.11	gi|118577119|ref|YP_876862.1|	-	1.8e-49	166.6	0.0	5.8e-48	161.7	0.0	2.7	3	0	0	3	3	3	1	S-adenosylmethionine	synthetase,	central	domain
S-AdoMet_synt_N	PF00438.15	gi|118577119|ref|YP_876862.1|	-	8.2e-39	131.8	2.8	2.3e-38	130.4	0.2	2.2	2	0	0	2	2	2	1	S-adenosylmethionine	synthetase,	N-terminal	domain
LSM	PF01423.17	gi|118577120|ref|YP_876863.1|	-	2.6e-18	65.3	0.5	3.2e-18	65.0	0.3	1.1	1	0	0	1	1	1	1	LSM	domain
Rad51	PF08423.6	gi|118577121|ref|YP_876864.1|	-	9e-26	90.3	0.0	1.1e-25	90.0	0.0	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|118577121|ref|YP_876864.1|	-	1.9e-11	43.6	0.0	2.6e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|118577121|ref|YP_876864.1|	-	7.4e-05	22.2	0.0	0.00016	21.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|118577121|ref|YP_876864.1|	-	0.00082	18.5	0.4	0.0015	17.7	0.3	1.5	1	0	0	1	1	1	1	KaiC
Zot	PF05707.7	gi|118577121|ref|YP_876864.1|	-	0.023	14.1	0.0	0.028	13.8	0.0	1.2	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_10	PF12846.2	gi|118577121|ref|YP_876864.1|	-	0.08	12.3	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|118577121|ref|YP_876864.1|	-	0.094	11.3	0.0	0.14	10.7	0.0	1.1	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DEAD	PF00270.24	gi|118577122|ref|YP_876865.1|	-	2.8e-34	118.0	0.0	5.6e-34	117.0	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|118577122|ref|YP_876865.1|	-	6.1e-33	114.1	0.1	1.7e-32	112.6	0.0	1.8	2	0	0	2	2	2	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|118577122|ref|YP_876865.1|	-	2.5e-17	62.5	0.0	2e-14	53.1	0.0	2.8	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|118577122|ref|YP_876865.1|	-	7.2e-09	35.7	0.0	1.5e-08	34.6	0.0	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|118577122|ref|YP_876865.1|	-	7.6e-05	21.6	0.0	0.00012	21.0	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
tRNA_anti-codon	PF01336.20	gi|118577123|ref|YP_876866.1|	-	0.0058	16.4	0.0	5.6	6.8	0.0	3.3	3	0	0	3	3	3	2	OB-fold	nucleic	acid	binding	domain
ABC_tran	PF00005.22	gi|118577124|ref|YP_876867.1|	-	9.6e-30	103.6	0.0	2.5e-29	102.3	0.0	1.7	2	1	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|118577124|ref|YP_876867.1|	-	5.4e-14	52.8	0.0	1.1e-08	35.3	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|118577124|ref|YP_876867.1|	-	3.4e-06	26.3	0.0	4e-05	22.8	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
DUF4162	PF13732.1	gi|118577124|ref|YP_876867.1|	-	0.00011	22.6	0.1	0.00022	21.6	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|118577124|ref|YP_876867.1|	-	0.0004	19.8	0.0	0.00084	18.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|118577124|ref|YP_876867.1|	-	0.00041	20.7	0.2	0.00065	20.0	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|118577124|ref|YP_876867.1|	-	0.0024	17.8	0.0	0.027	14.4	0.0	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
SbcCD_C	PF13558.1	gi|118577124|ref|YP_876867.1|	-	0.0065	16.3	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_33	PF13671.1	gi|118577124|ref|YP_876867.1|	-	0.014	15.2	0.1	0.063	13.1	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.15	gi|118577124|ref|YP_876867.1|	-	0.015	14.9	0.1	0.038	13.6	0.0	1.7	2	0	0	2	2	2	0	Adenylylsulphate	kinase
ACT	PF01842.20	gi|118577124|ref|YP_876867.1|	-	0.018	14.5	0.1	0.038	13.4	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
AAA_10	PF12846.2	gi|118577124|ref|YP_876867.1|	-	0.02	14.3	0.1	0.052	12.9	0.0	1.7	2	0	0	2	2	2	0	AAA-like	domain
Zeta_toxin	PF06414.7	gi|118577124|ref|YP_876867.1|	-	0.02	13.9	0.0	0.045	12.8	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
DUF258	PF03193.11	gi|118577124|ref|YP_876867.1|	-	0.051	12.7	0.0	0.12	11.5	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|118577124|ref|YP_876867.1|	-	0.054	12.7	0.0	7.8	5.6	0.0	2.4	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
SRP54	PF00448.17	gi|118577124|ref|YP_876867.1|	-	0.064	12.6	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.1	gi|118577124|ref|YP_876867.1|	-	0.075	13.0	0.0	0.22	11.4	0.0	1.9	2	1	0	2	2	1	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|118577124|ref|YP_876867.1|	-	0.095	13.5	0.2	0.46	11.3	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.19	gi|118577125|ref|YP_876868.1|	-	6.9e-18	64.5	21.8	6.9e-18	64.5	15.1	1.4	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|118577125|ref|YP_876868.1|	-	7.3e-12	44.9	27.1	7.3e-12	44.9	18.8	1.5	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|118577125|ref|YP_876868.1|	-	5.2e-08	32.3	26.7	7.2e-08	31.8	18.5	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
Syndecan	PF01034.15	gi|118577125|ref|YP_876868.1|	-	0.16	11.6	0.3	0.16	11.6	0.2	3.0	3	1	0	3	3	3	0	Syndecan	domain
PepSY_TM_1	PF13172.1	gi|118577125|ref|YP_876868.1|	-	2.8	7.8	6.0	0.51	10.1	0.4	2.7	2	0	0	2	2	2	0	PepSY-associated	TM	helix
ABC2_membrane_5	PF13346.1	gi|118577125|ref|YP_876868.1|	-	3	7.0	25.8	14	4.8	17.9	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
DUF354	PF04007.7	gi|118577126|ref|YP_876869.1|	-	1.3e-39	136.0	0.0	1.7e-39	135.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF354)
Glyco_trans_1_4	PF13692.1	gi|118577126|ref|YP_876869.1|	-	0.0024	18.0	0.0	0.0044	17.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_3	PF13528.1	gi|118577126|ref|YP_876869.1|	-	0.015	14.5	0.0	1.6	7.8	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	transferase	family	1
LpxB	PF02684.10	gi|118577126|ref|YP_876869.1|	-	0.19	10.2	0.0	0.28	9.7	0.0	1.2	1	0	0	1	1	1	0	Lipid-A-disaccharide	synthetase
GrpE	PF01025.14	gi|118577128|ref|YP_876871.1|	-	9.6e-35	119.5	0.0	1.1e-34	119.3	0.0	1.1	1	0	0	1	1	1	1	GrpE
Prefoldin_2	PF01920.15	gi|118577128|ref|YP_876871.1|	-	0.32	10.7	2.4	0.54	10.0	1.7	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
HSP70	PF00012.15	gi|118577129|ref|YP_876872.1|	-	1.6e-214	713.2	13.3	1.3e-193	644.2	6.2	2.0	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.8	gi|118577129|ref|YP_876872.1|	-	3.9e-18	65.1	5.1	1.2e-17	63.5	3.6	1.8	1	1	0	1	1	1	1	MreB/Mbl	protein
FtsA	PF14450.1	gi|118577129|ref|YP_876872.1|	-	0.03	14.1	9.0	2.7	7.8	0.4	4.2	3	1	0	3	3	3	0	Cell	division	protein	FtsA
EcsC	PF12787.2	gi|118577129|ref|YP_876872.1|	-	0.052	12.9	1.2	0.083	12.2	0.3	1.8	2	0	0	2	2	2	0	EcsC	protein	family
StbA	PF06406.6	gi|118577129|ref|YP_876872.1|	-	0.072	12.0	3.7	0.08	11.8	0.5	2.3	2	1	1	3	3	3	0	StbA	protein
CTDII	PF01556.13	gi|118577130|ref|YP_876873.1|	-	5.3e-27	93.5	5.7	8e-22	76.9	0.7	3.3	3	0	0	3	3	3	3	DnaJ	C	terminal	domain
DnaJ	PF00226.26	gi|118577130|ref|YP_876873.1|	-	2.2e-25	88.1	0.3	3.4e-25	87.5	0.2	1.3	1	0	0	1	1	1	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.14	gi|118577130|ref|YP_876873.1|	-	3.3e-12	46.2	21.0	5.7e-12	45.5	14.5	1.4	1	0	0	1	1	1	1	DnaJ	central	domain
Serpin	PF00079.15	gi|118577132|ref|YP_876875.1|	-	9.1e-97	324.4	0.0	1e-96	324.2	0.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
GatB_N	PF02934.10	gi|118577134|ref|YP_876877.1|	-	1.1e-67	227.9	0.0	1.4e-67	227.6	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|118577134|ref|YP_876877.1|	-	1.4e-17	63.7	0.1	2.4e-17	63.0	0.1	1.4	1	0	0	1	1	1	1	GatB	domain
GAD	PF02938.9	gi|118577134|ref|YP_876877.1|	-	2.9e-06	27.3	0.0	8.1e-06	25.9	0.0	1.7	1	0	0	1	1	1	1	GAD	domain
YqeY	PF09424.5	gi|118577134|ref|YP_876877.1|	-	0.036	13.9	0.2	0.074	12.9	0.2	1.5	1	0	0	1	1	1	0	Yqey-like	protein
Asparaginase	PF00710.15	gi|118577135|ref|YP_876878.1|	-	9.8e-75	251.3	0.0	1.1e-74	251.1	0.0	1.0	1	0	0	1	1	1	1	Asparaginase
AAA	PF00004.24	gi|118577136|ref|YP_876879.1|	-	2.1e-97	322.4	0.0	2.6e-49	166.7	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|118577136|ref|YP_876879.1|	-	7.9e-28	96.2	0.2	2.5e-27	94.6	0.1	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_16	PF13191.1	gi|118577136|ref|YP_876879.1|	-	4.2e-15	56.2	0.2	3.6e-06	27.0	0.0	3.2	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_2	PF07724.9	gi|118577136|ref|YP_876879.1|	-	1.9e-14	53.9	0.0	3.5e-07	30.3	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|118577136|ref|YP_876879.1|	-	2.1e-13	49.8	0.0	8.9e-09	34.7	0.0	2.7	3	0	0	3	3	3	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|118577136|ref|YP_876879.1|	-	9e-13	48.5	0.3	4e-05	23.7	0.0	4.2	2	2	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|118577136|ref|YP_876879.1|	-	5.2e-11	43.4	0.1	3.6e-05	24.5	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|118577136|ref|YP_876879.1|	-	1.4e-10	41.0	1.2	0.00088	19.0	0.1	3.8	3	2	0	3	3	2	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|118577136|ref|YP_876879.1|	-	2.6e-10	39.6	1.9	0.00011	21.0	0.0	2.7	3	0	0	3	3	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|118577136|ref|YP_876879.1|	-	9.3e-10	38.4	0.0	0.00017	21.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|118577136|ref|YP_876879.1|	-	1e-09	38.3	0.0	0.00061	19.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|118577136|ref|YP_876879.1|	-	3.7e-09	35.9	0.3	6.7e-05	22.0	0.0	2.8	3	0	0	3	3	3	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|118577136|ref|YP_876879.1|	-	1.1e-07	31.4	0.8	0.0033	16.8	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Sigma54_activat	PF00158.21	gi|118577136|ref|YP_876879.1|	-	1.2e-07	31.3	0.2	0.036	13.5	0.0	3.4	3	1	0	3	3	3	2	Sigma-54	interaction	domain
CDC48_2	PF02933.12	gi|118577136|ref|YP_876879.1|	-	1.2e-07	31.1	0.1	3.1e-07	29.9	0.0	1.6	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_28	PF13521.1	gi|118577136|ref|YP_876879.1|	-	3.1e-07	30.5	0.1	0.011	15.7	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|118577136|ref|YP_876879.1|	-	4.7e-07	29.4	2.6	0.0051	16.5	0.1	3.3	3	0	0	3	3	3	2	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|118577136|ref|YP_876879.1|	-	7.4e-07	29.1	0.0	0.0043	16.7	0.0	3.5	2	2	1	3	3	3	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|118577136|ref|YP_876879.1|	-	1.5e-06	28.5	0.1	0.021	15.1	0.0	3.0	3	0	0	3	3	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|118577136|ref|YP_876879.1|	-	3.7e-06	27.0	0.0	0.037	14.1	0.0	2.5	2	0	0	2	2	2	2	RNA	helicase
AAA_25	PF13481.1	gi|118577136|ref|YP_876879.1|	-	4.6e-06	26.1	7.3	0.46	9.8	0.6	4.3	2	2	1	3	3	3	2	AAA	domain
NACHT	PF05729.7	gi|118577136|ref|YP_876879.1|	-	5.5e-06	26.1	0.6	0.69	9.5	0.3	3.9	3	1	1	4	4	4	2	NACHT	domain
Bac_DnaA	PF00308.13	gi|118577136|ref|YP_876879.1|	-	6.6e-06	25.9	0.0	0.0074	15.9	0.0	2.6	2	0	0	2	2	2	1	Bacterial	dnaA	protein
KaiC	PF06745.8	gi|118577136|ref|YP_876879.1|	-	6.8e-06	25.3	3.5	0.098	11.7	0.0	3.9	3	2	2	5	5	4	2	KaiC
PhoH	PF02562.11	gi|118577136|ref|YP_876879.1|	-	1.8e-05	24.0	0.4	0.2	10.8	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
Sigma54_activ_2	PF14532.1	gi|118577136|ref|YP_876879.1|	-	1.8e-05	24.8	0.0	0.1	12.6	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|118577136|ref|YP_876879.1|	-	2.1e-05	23.7	0.7	0.033	13.3	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.8	gi|118577136|ref|YP_876879.1|	-	3.9e-05	22.6	0.0	0.084	11.7	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
NB-ARC	PF00931.17	gi|118577136|ref|YP_876879.1|	-	6.5e-05	21.9	0.0	0.095	11.5	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
AAA_24	PF13479.1	gi|118577136|ref|YP_876879.1|	-	0.00017	21.2	0.2	0.026	14.1	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|118577136|ref|YP_876879.1|	-	0.00019	21.7	0.0	0.67	10.2	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_3	PF07726.6	gi|118577136|ref|YP_876879.1|	-	0.00019	21.0	0.0	0.37	10.4	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|118577136|ref|YP_876879.1|	-	0.00022	20.3	0.0	0.32	9.9	0.0	2.4	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.10	gi|118577136|ref|YP_876879.1|	-	0.00042	20.0	1.6	3.5	7.3	0.0	4.5	3	1	1	4	4	4	0	NTPase
ATP-synt_ab	PF00006.20	gi|118577136|ref|YP_876879.1|	-	0.001	18.6	0.0	0.99	8.8	0.0	2.3	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
CPT	PF07931.7	gi|118577136|ref|YP_876879.1|	-	0.0013	18.4	0.0	0.16	11.5	0.0	2.7	2	0	0	2	2	2	1	Chloramphenicol	phosphotransferase-like	protein
UPF0079	PF02367.12	gi|118577136|ref|YP_876879.1|	-	0.0014	18.2	0.1	2.2	7.9	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
ResIII	PF04851.10	gi|118577136|ref|YP_876879.1|	-	0.0016	18.3	0.0	0.54	10.0	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.1	gi|118577136|ref|YP_876879.1|	-	0.0018	17.8	0.2	1.9	8.0	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
SKI	PF01202.17	gi|118577136|ref|YP_876879.1|	-	0.0019	18.0	0.0	0.74	9.6	0.0	2.4	2	0	0	2	2	2	1	Shikimate	kinase
Parvo_NS1	PF01057.12	gi|118577136|ref|YP_876879.1|	-	0.0037	16.1	0.1	0.26	10.1	0.0	2.2	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
T2SE	PF00437.15	gi|118577136|ref|YP_876879.1|	-	0.0068	15.3	0.0	1.8	7.4	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.13	gi|118577136|ref|YP_876879.1|	-	0.014	14.9	0.0	0.58	9.6	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.1	gi|118577136|ref|YP_876879.1|	-	0.024	14.1	0.1	5.7	6.5	0.0	2.7	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
PduV-EutP	PF10662.4	gi|118577136|ref|YP_876879.1|	-	0.035	13.6	0.0	15	5.0	0.0	3.1	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
Guanylate_kin	PF00625.16	gi|118577136|ref|YP_876879.1|	-	0.046	13.1	0.2	22	4.4	0.0	3.3	2	1	1	3	3	3	0	Guanylate	kinase
Torsin	PF06309.6	gi|118577136|ref|YP_876879.1|	-	0.064	13.1	0.1	4	7.3	0.0	2.5	2	0	0	2	2	2	0	Torsin
AFG1_ATPase	PF03969.11	gi|118577136|ref|YP_876879.1|	-	0.085	11.6	0.0	12	4.6	0.0	2.3	2	0	0	2	2	2	0	AFG1-like	ATPase
PIF1	PF05970.9	gi|118577136|ref|YP_876879.1|	-	0.086	11.7	0.0	10	4.9	0.0	2.3	2	0	0	2	2	2	0	PIF1-like	helicase
AAA_10	PF12846.2	gi|118577136|ref|YP_876879.1|	-	0.087	12.2	0.3	15	4.9	0.0	3.2	2	2	0	2	2	2	0	AAA-like	domain
DUF2493	PF10686.4	gi|118577136|ref|YP_876879.1|	-	0.088	12.3	0.0	0.63	9.6	0.0	2.5	3	0	0	3	3	1	0	Protein	of	unknown	function	(DUF2493)
AAA_11	PF13086.1	gi|118577136|ref|YP_876879.1|	-	0.12	11.8	0.0	1.6	8.2	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
KAP_NTPase	PF07693.9	gi|118577136|ref|YP_876879.1|	-	0.13	11.2	0.0	6.5	5.6	0.0	2.6	2	1	1	3	3	3	0	KAP	family	P-loop	domain
IPT	PF01745.11	gi|118577136|ref|YP_876879.1|	-	0.15	11.2	0.5	10	5.1	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
Ribosomal_L2_C	PF03947.13	gi|118577137|ref|YP_876880.1|	-	3e-31	107.9	2.8	5.3e-31	107.1	1.9	1.4	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|118577137|ref|YP_876880.1|	-	4.7e-07	29.6	0.0	1.2e-06	28.3	0.0	1.8	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
DUF59	PF01883.14	gi|118577138|ref|YP_876881.1|	-	1.6e-17	63.2	0.1	4e-17	61.9	0.1	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF59
PqqD	PF05402.7	gi|118577138|ref|YP_876881.1|	-	1.9e-07	30.9	0.0	3.9e-07	29.9	0.0	1.6	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
adh_short	PF00106.20	gi|118577139|ref|YP_876882.1|	-	6.5e-08	32.6	0.1	0.0019	18.1	0.0	2.2	1	1	1	2	2	2	2	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|118577139|ref|YP_876882.1|	-	3.2e-05	23.8	0.0	0.00089	19.0	0.0	2.1	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
NAD_binding_10	PF13460.1	gi|118577139|ref|YP_876882.1|	-	0.0012	18.8	0.0	0.0017	18.3	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
RmlD_sub_bind	PF04321.12	gi|118577139|ref|YP_876882.1|	-	0.005	15.7	0.1	0.012	14.5	0.0	1.5	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
2-Hacid_dh_C	PF02826.14	gi|118577139|ref|YP_876882.1|	-	0.11	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Aminotran_1_2	PF00155.16	gi|118577140|ref|YP_876883.1|	-	8e-55	186.2	0.0	9.7e-55	185.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|118577140|ref|YP_876883.1|	-	4.1e-07	29.3	0.0	1.2e-06	27.8	0.0	1.6	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|118577140|ref|YP_876883.1|	-	0.00055	18.7	0.0	0.0014	17.4	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|118577140|ref|YP_876883.1|	-	0.0043	16.2	0.0	0.0083	15.2	0.0	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|118577140|ref|YP_876883.1|	-	0.019	13.2	0.0	0.028	12.7	0.0	1.1	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Pyridox_oxidase	PF01243.15	gi|118577141|ref|YP_876884.1|	-	1.7e-08	34.3	0.0	2.5e-08	33.8	0.0	1.3	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.2	gi|118577141|ref|YP_876884.1|	-	1.8e-06	27.8	0.0	2.2e-06	27.5	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
DUF308	PF03729.8	gi|118577142|ref|YP_876885.1|	-	0.015	15.2	0.4	0.096	12.6	0.0	2.0	2	0	0	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
F420_oxidored	PF03807.12	gi|118577143|ref|YP_876886.1|	-	1.2e-11	44.8	0.0	2.5e-11	43.8	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
His_Phos_1	PF00300.17	gi|118577144|ref|YP_876887.1|	-	1.3e-30	106.6	0.0	1.5e-30	106.3	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
DUF2567	PF10821.3	gi|118577145|ref|YP_876888.1|	-	0.038	13.5	0.2	0.045	13.2	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2567)
BPD_transp_2	PF02653.11	gi|118577145|ref|YP_876888.1|	-	0.075	11.9	0.5	0.094	11.6	0.3	1.2	1	1	0	1	1	1	0	Branched-chain	amino	acid	transport	system	/	permease	component
Acyl_transf_3	PF01757.17	gi|118577145|ref|YP_876888.1|	-	0.11	11.2	1.2	0.19	10.4	0.1	1.6	1	1	1	2	2	2	0	Acyltransferase	family
TatC	PF00902.13	gi|118577145|ref|YP_876888.1|	-	0.37	10.1	3.0	3	7.1	2.6	1.7	1	1	0	1	1	1	0	Sec-independent	protein	translocase	protein	(TatC)
DUF3099	PF11298.3	gi|118577145|ref|YP_876888.1|	-	6.6	6.5	9.8	5.7	6.7	0.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3099)
COX2	PF00116.15	gi|118577146|ref|YP_876889.1|	-	1e-19	70.4	1.9	2.9e-17	62.6	1.3	2.1	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|118577146|ref|YP_876889.1|	-	6.4e-05	22.7	0.0	6.9e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Cupredoxin-like	domain
COX1	PF00115.15	gi|118577147|ref|YP_876890.1|	-	7.1e-142	473.1	57.3	9.1e-142	472.8	39.7	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Copper-bind	PF00127.15	gi|118577148|ref|YP_876891.1|	-	7.2e-05	22.9	0.0	9.7e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cu-oxidase_3	PF07732.10	gi|118577148|ref|YP_876891.1|	-	0.00058	19.5	0.0	0.0012	18.5	0.0	1.5	1	1	0	1	1	1	1	Multicopper	oxidase
SoxE	PF06525.6	gi|118577148|ref|YP_876891.1|	-	0.032	13.4	0.1	0.048	12.9	0.0	1.3	1	0	0	1	1	1	0	Sulfocyanin	(SoxE)
COX15-CtaA	PF02628.10	gi|118577149|ref|YP_876892.1|	-	1.4e-20	73.3	12.1	2.1e-20	72.8	8.4	1.3	1	1	0	1	1	1	1	Cytochrome	oxidase	assembly	protein
Tetraspannin	PF00335.15	gi|118577149|ref|YP_876892.1|	-	0.097	11.9	5.3	0.12	11.6	3.7	1.1	1	0	0	1	1	1	0	Tetraspanin	family
DUF2892	PF11127.3	gi|118577149|ref|YP_876892.1|	-	3.1	7.6	10.5	0.15	11.9	1.4	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2892)
Polyketide_cyc2	PF10604.4	gi|118577151|ref|YP_876894.1|	-	6.3e-05	23.1	0.1	8.5e-05	22.7	0.1	1.2	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc	PF03364.15	gi|118577151|ref|YP_876894.1|	-	7.3e-05	22.7	0.1	9.9e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Thioredoxin	PF00085.15	gi|118577152|ref|YP_876895.1|	-	3.4e-27	94.1	0.0	4e-27	93.9	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|118577152|ref|YP_876895.1|	-	3.4e-09	36.8	0.0	2.7e-08	33.9	0.0	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|118577152|ref|YP_876895.1|	-	5.7e-09	35.9	0.0	1.8e-06	27.9	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|118577152|ref|YP_876895.1|	-	1.7e-06	27.6	0.0	2.2e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Redoxin	PF08534.5	gi|118577152|ref|YP_876895.1|	-	3.9e-06	26.4	0.0	4.5e-06	26.2	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Thioredoxin_3	PF13192.1	gi|118577152|ref|YP_876895.1|	-	0.00034	20.3	0.0	0.00054	19.7	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_7	PF13899.1	gi|118577152|ref|YP_876895.1|	-	0.0009	19.2	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
AhpC-TSA	PF00578.16	gi|118577152|ref|YP_876895.1|	-	0.0018	17.9	0.0	0.0028	17.3	0.0	1.5	1	1	0	1	1	1	1	AhpC/TSA	family
HyaE	PF07449.6	gi|118577152|ref|YP_876895.1|	-	0.0097	15.7	0.0	0.027	14.3	0.0	1.6	2	0	0	2	2	2	1	Hydrogenase-1	expression	protein	HyaE
Phosducin	PF02114.11	gi|118577152|ref|YP_876895.1|	-	0.012	14.3	0.0	0.012	14.3	0.0	1.1	1	0	0	1	1	1	0	Phosducin
TraF	PF13728.1	gi|118577152|ref|YP_876895.1|	-	0.019	14.4	0.0	0.026	14.0	0.0	1.2	1	0	0	1	1	1	0	F	plasmid	transfer	operon	protein
Toxin-deaminase	PF14424.1	gi|118577152|ref|YP_876895.1|	-	0.039	13.9	0.0	0.067	13.1	0.0	1.3	1	0	0	1	1	1	0	The	BURPS668_1122	family	of	deaminases
Archease	PF01951.11	gi|118577153|ref|YP_876896.1|	-	3.5e-32	111.2	0.0	3.9e-32	111.0	0.0	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
TMEM206	PF15122.1	gi|118577153|ref|YP_876896.1|	-	0.14	11.0	0.0	0.18	10.6	0.0	1.1	1	0	0	1	1	1	0	TMEM206	protein	family
Tcp10_C	PF07202.8	gi|118577154|ref|YP_876897.1|	-	0.00099	18.6	0.1	0.0014	18.1	0.1	1.3	1	0	0	1	1	1	1	T-complex	protein	10	C-terminus
DUF2158	PF09926.4	gi|118577154|ref|YP_876897.1|	-	0.057	12.8	0.4	6.7	6.2	0.0	2.7	2	1	1	3	3	3	0	Uncharacterized	small	protein	(DUF2158)
DUF2345	PF10106.4	gi|118577154|ref|YP_876897.1|	-	0.066	12.8	0.3	0.066	12.8	0.2	1.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
Pro_CA	PF00484.14	gi|118577155|ref|YP_876898.1|	-	0.097	12.6	2.2	0.11	12.4	0.5	1.8	2	1	0	2	2	2	0	Carbonic	anhydrase
UbiA	PF01040.13	gi|118577156|ref|YP_876899.1|	-	1.8e-26	92.9	27.9	2.3e-26	92.5	19.3	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
AsnC_trans_reg	PF01037.16	gi|118577157|ref|YP_876900.1|	-	3.1e-11	42.8	0.1	5.3e-11	42.0	0.1	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|118577157|ref|YP_876900.1|	-	3.7e-11	42.2	1.4	1.2e-10	40.6	0.4	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|118577157|ref|YP_876900.1|	-	8.8e-10	37.9	0.1	2.8e-09	36.3	0.0	1.9	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|118577157|ref|YP_876900.1|	-	3.9e-05	23.2	0.1	9.5e-05	22.0	0.1	1.6	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|118577157|ref|YP_876900.1|	-	0.00058	19.4	0.3	0.0011	18.6	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
MotA_activ	PF09114.5	gi|118577157|ref|YP_876900.1|	-	0.0022	17.7	0.4	0.0039	16.9	0.3	1.4	1	0	0	1	1	1	1	Transcription	factor	MotA,	activation	domain
B-block_TFIIIC	PF04182.7	gi|118577157|ref|YP_876900.1|	-	0.0026	17.5	0.2	0.0058	16.4	0.1	1.6	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
Ribosomal_S25	PF03297.10	gi|118577157|ref|YP_876900.1|	-	0.0049	16.8	0.6	0.009	16.0	0.4	1.4	1	0	0	1	1	1	1	S25	ribosomal	protein
MarR_2	PF12802.2	gi|118577157|ref|YP_876900.1|	-	0.0057	16.2	0.2	0.017	14.8	0.0	1.8	2	1	0	2	2	2	1	MarR	family
TrmB	PF01978.14	gi|118577157|ref|YP_876900.1|	-	0.01	15.5	1.5	0.013	15.1	0.4	1.6	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|118577157|ref|YP_876900.1|	-	0.014	15.4	0.1	0.022	14.7	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|118577157|ref|YP_876900.1|	-	0.015	15.1	0.0	0.036	13.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|118577157|ref|YP_876900.1|	-	0.015	15.2	0.1	0.027	14.4	0.1	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
GntR	PF00392.16	gi|118577157|ref|YP_876900.1|	-	0.016	14.6	0.1	0.03	13.7	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF4342	PF14242.1	gi|118577157|ref|YP_876900.1|	-	0.081	12.7	0.2	0.15	11.8	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4342)
Rrf2	PF02082.15	gi|118577157|ref|YP_876900.1|	-	0.083	13.0	0.1	0.35	10.9	0.1	1.9	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_5	PF01022.15	gi|118577157|ref|YP_876900.1|	-	0.16	11.6	0.7	0.49	10.0	0.4	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Semialdhyde_dhC	PF02774.13	gi|118577158|ref|YP_876901.1|	-	8.5e-35	120.2	0.0	1.6e-34	119.3	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.19	gi|118577158|ref|YP_876901.1|	-	1.5e-28	99.5	0.0	2.8e-28	98.6	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|118577158|ref|YP_876901.1|	-	0.025	14.4	0.0	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_C	PF02800.15	gi|118577158|ref|YP_876901.1|	-	0.031	13.7	0.1	1.8	7.9	0.0	2.7	3	0	0	3	3	3	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.11	gi|118577158|ref|YP_876901.1|	-	0.037	14.5	0.0	0.077	13.5	0.0	1.5	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NAD_binding_10	PF13460.1	gi|118577158|ref|YP_876901.1|	-	0.1	12.6	0.0	0.22	11.5	0.0	1.6	1	0	0	1	1	1	0	NADH(P)-binding
Aminotran_1_2	PF00155.16	gi|118577159|ref|YP_876902.1|	-	4.6e-47	160.7	0.0	5.3e-47	160.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
CbiA	PF01656.18	gi|118577160|ref|YP_876903.1|	-	6.6e-27	94.1	0.0	8.1e-27	93.9	0.0	1.0	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|118577160|ref|YP_876903.1|	-	1.7e-17	63.6	0.0	2.7e-17	63.0	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|118577160|ref|YP_876903.1|	-	0.0035	17.0	0.0	0.091	12.4	0.0	2.3	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|118577160|ref|YP_876903.1|	-	0.032	15.0	0.0	0.54	11.0	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
FTR	PF01913.13	gi|118577160|ref|YP_876903.1|	-	0.07	12.8	0.0	0.22	11.2	0.0	1.7	2	0	0	2	2	2	0	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
CobD_Cbib	PF03186.8	gi|118577161|ref|YP_876904.1|	-	3e-96	321.9	2.0	3.7e-96	321.6	1.4	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
CobS	PF02654.10	gi|118577162|ref|YP_876905.1|	-	4e-46	157.5	20.6	4.5e-46	157.3	14.3	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
NTP_transf_3	PF12804.2	gi|118577163|ref|YP_876906.1|	-	2.1e-15	57.1	0.1	2.3e-15	57.0	0.1	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|118577163|ref|YP_876906.1|	-	0.00012	21.6	0.0	0.00017	21.1	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|118577163|ref|YP_876906.1|	-	0.0078	15.8	0.0	0.048	13.2	0.0	1.9	1	1	0	1	1	1	1	Cytidylyltransferase
CofC	PF01983.11	gi|118577163|ref|YP_876906.1|	-	0.11	11.3	0.0	0.15	11.0	0.0	1.2	1	0	0	1	1	1	0	Guanylyl	transferase	CofC	like
Ribosomal_L44	PF00935.14	gi|118577164|ref|YP_876907.1|	-	3.2e-25	87.9	5.9	3.2e-25	87.9	4.1	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L44
zf-C2H2	PF00096.21	gi|118577164|ref|YP_876907.1|	-	0.0045	17.2	4.7	0.17	12.2	0.2	2.4	2	0	0	2	2	2	1	Zinc	finger,	C2H2	type
zf-H2C2_2	PF13465.1	gi|118577164|ref|YP_876907.1|	-	0.0083	16.3	6.8	0.08	13.2	0.6	2.6	2	0	0	2	2	2	1	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.2	gi|118577164|ref|YP_876907.1|	-	0.014	15.1	1.1	2.4	8.0	0.1	2.2	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|118577164|ref|YP_876907.1|	-	0.015	15.1	0.4	0.015	15.1	0.2	2.1	1	1	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Ribosomal_L33	PF00471.15	gi|118577164|ref|YP_876907.1|	-	0.025	14.8	1.9	0.025	14.8	1.3	2.4	2	1	1	3	3	3	0	Ribosomal	protein	L33
zf-C2H2_4	PF13894.1	gi|118577164|ref|YP_876907.1|	-	0.026	14.8	3.6	1.7	9.1	0.1	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Cys_rich_KTR	PF14205.1	gi|118577164|ref|YP_876907.1|	-	0.029	13.8	4.2	0.35	10.3	0.5	2.2	2	0	0	2	2	2	0	Cysteine-rich	KTR
Zn-ribbon_8	PF09723.5	gi|118577164|ref|YP_876907.1|	-	0.031	14.2	2.6	4.6	7.2	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|118577164|ref|YP_876907.1|	-	0.032	13.4	1.4	4.8	6.5	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|118577164|ref|YP_876907.1|	-	0.04	13.9	3.4	1.1	9.3	0.6	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc-ribbons_6	PF07191.7	gi|118577164|ref|YP_876907.1|	-	0.041	13.6	0.5	4.8	7.0	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbons
ADK_lid	PF05191.9	gi|118577164|ref|YP_876907.1|	-	0.041	13.5	2.5	3.6	7.3	0.0	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF329	PF03884.9	gi|118577164|ref|YP_876907.1|	-	0.042	13.4	2.0	4.1	7.0	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
DUF2296	PF10058.4	gi|118577164|ref|YP_876907.1|	-	0.046	13.4	0.7	1.7	8.4	0.0	2.1	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-C4_Topoisom	PF01396.14	gi|118577164|ref|YP_876907.1|	-	0.085	12.3	2.1	2.3	7.8	0.2	2.7	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C2H2_6	PF13912.1	gi|118577164|ref|YP_876907.1|	-	0.09	12.7	0.2	0.09	12.7	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zinc_ribbon_5	PF13719.1	gi|118577164|ref|YP_876907.1|	-	0.1	12.2	4.8	0.34	10.5	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-RING_4	PF14570.1	gi|118577164|ref|YP_876907.1|	-	0.11	12.0	3.4	2.3	7.8	0.1	2.2	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
zinc_ribbon_4	PF13717.1	gi|118577164|ref|YP_876907.1|	-	0.12	12.1	5.0	0.42	10.3	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|118577164|ref|YP_876907.1|	-	0.12	11.5	0.8	4.3	6.6	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
C1_4	PF07975.7	gi|118577164|ref|YP_876907.1|	-	0.13	12.2	1.5	2	8.4	0.1	2.2	2	0	0	2	2	2	0	TFIIH	C1-like	domain
Elf1	PF05129.8	gi|118577164|ref|YP_876907.1|	-	0.16	11.7	2.3	6.8	6.4	0.3	2.2	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
Integrase_Zn	PF02022.14	gi|118577164|ref|YP_876907.1|	-	0.42	10.0	2.8	2.2	7.8	0.2	2.2	2	0	0	2	2	2	0	Integrase	Zinc	binding	domain
TFIIS_C	PF01096.13	gi|118577164|ref|YP_876907.1|	-	0.91	9.2	6.9	4.7	6.9	0.2	2.4	2	1	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C3HC4_3	PF13920.1	gi|118577164|ref|YP_876907.1|	-	0.93	9.2	3.7	12	5.6	0.5	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
IBR	PF01485.16	gi|118577164|ref|YP_876907.1|	-	1.1	9.1	4.3	4.6	7.1	3.0	1.8	1	1	0	1	1	1	0	IBR	domain
DZR	PF12773.2	gi|118577164|ref|YP_876907.1|	-	1.2	9.0	6.2	5.1	7.0	4.3	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|118577164|ref|YP_876907.1|	-	3.6	7.2	8.9	2.6	7.6	1.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|118577164|ref|YP_876907.1|	-	7.3	6.3	7.1	4	7.2	0.2	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Adenine_deam_C	PF13382.1	gi|118577165|ref|YP_876908.1|	-	1.2e-46	157.9	0.0	1.8e-46	157.4	0.0	1.2	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.15	gi|118577165|ref|YP_876908.1|	-	6.6e-15	55.5	0.0	1e-12	48.3	0.0	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|118577165|ref|YP_876908.1|	-	5.3e-10	38.9	0.3	2.2e-09	36.9	0.2	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|118577165|ref|YP_876908.1|	-	7.8e-06	26.1	1.0	0.0022	18.0	0.1	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|118577165|ref|YP_876908.1|	-	0.066	12.4	0.6	0.11	11.6	0.2	1.5	2	0	0	2	2	2	0	Amidohydrolase	family
Cpn60_TCP1	PF00118.19	gi|118577166|ref|YP_876909.1|	-	4.2e-160	533.5	9.3	5.1e-160	533.2	6.4	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
ROK	PF00480.15	gi|118577167|ref|YP_876910.1|	-	1.9e-45	154.8	0.1	2.4e-45	154.5	0.1	1.1	1	0	0	1	1	1	1	ROK	family
BcrAD_BadFG	PF01869.15	gi|118577167|ref|YP_876910.1|	-	0.00019	20.8	0.1	0.0014	18.0	0.1	2.1	2	1	0	2	2	2	1	BadF/BadG/BcrA/BcrD	ATPase	family
Hydant_A_N	PF05378.8	gi|118577167|ref|YP_876910.1|	-	0.00038	20.0	0.1	0.00056	19.4	0.1	1.2	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
GATase	PF00117.23	gi|118577168|ref|YP_876911.1|	-	3.9e-37	127.5	0.0	5.8e-37	127.0	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GMP_synt_C	PF00958.17	gi|118577168|ref|YP_876911.1|	-	3.3e-31	106.8	0.0	5.9e-31	106.0	0.0	1.4	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|118577168|ref|YP_876911.1|	-	1.5e-10	40.4	0.0	3.9e-05	22.6	0.0	2.4	2	0	0	2	2	2	2	NAD	synthase
Peptidase_C26	PF07722.8	gi|118577168|ref|YP_876911.1|	-	3.9e-06	26.4	0.0	5.3e-05	22.7	0.0	2.3	2	1	0	2	2	2	1	Peptidase	C26
Asn_synthase	PF00733.16	gi|118577168|ref|YP_876911.1|	-	6.4e-05	22.5	0.2	0.00048	19.7	0.0	2.1	2	0	0	2	2	2	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|118577168|ref|YP_876911.1|	-	0.00031	19.4	0.0	0.014	14.0	0.0	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
QueC	PF06508.8	gi|118577168|ref|YP_876911.1|	-	0.0017	17.6	0.0	0.031	13.5	0.0	2.1	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|118577168|ref|YP_876911.1|	-	0.0018	17.7	0.0	0.022	14.2	0.0	2.3	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.14	gi|118577168|ref|YP_876911.1|	-	0.011	15.5	0.0	0.018	14.8	0.0	1.3	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_3	PF01171.15	gi|118577168|ref|YP_876911.1|	-	0.19	11.2	0.0	0.42	10.0	0.0	1.6	2	0	0	2	2	2	0	PP-loop	family
Med9	PF07544.8	gi|118577169|ref|YP_876912.1|	-	0.032	13.9	3.3	0.15	11.8	0.4	2.5	3	0	0	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
MAF_flag10	PF01973.13	gi|118577171|ref|YP_876914.1|	-	5.7e-32	110.5	0.0	7.4e-32	110.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|118577171|ref|YP_876914.1|	-	0.057	13.0	0.3	6.6	6.3	0.0	2.3	2	0	0	2	2	2	0	Thiamin	pyrophosphokinase,	catalytic	domain
Pterin_bind	PF00809.17	gi|118577172|ref|YP_876915.1|	-	8.8e-36	123.2	0.0	1.4e-35	122.6	0.0	1.3	1	1	0	1	1	1	1	Pterin	binding	enzyme
PEP_mutase	PF13714.1	gi|118577172|ref|YP_876915.1|	-	0.0012	18.0	0.5	0.0012	18.0	0.4	1.7	2	0	0	2	2	2	1	Phosphoenolpyruvate	phosphomutase
IMPDH	PF00478.20	gi|118577173|ref|YP_876916.1|	-	1.1e-133	445.4	3.3	1.3e-133	445.3	2.3	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.23	gi|118577173|ref|YP_876916.1|	-	1.3e-20	72.8	0.5	1.5e-10	40.7	0.1	2.7	2	0	0	2	2	2	2	CBS	domain
NMO	PF03060.10	gi|118577173|ref|YP_876916.1|	-	3.1e-11	43.0	5.0	3.4e-06	26.4	2.2	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|118577173|ref|YP_876916.1|	-	7.8e-06	24.9	5.2	2.6e-05	23.2	3.5	1.9	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
DHO_dh	PF01180.16	gi|118577173|ref|YP_876916.1|	-	0.00029	19.9	1.7	0.00036	19.6	0.3	1.6	1	1	0	2	2	2	1	Dihydroorotate	dehydrogenase
NanE	PF04131.9	gi|118577173|ref|YP_876916.1|	-	0.00047	19.1	1.2	0.0011	17.9	0.8	1.6	1	0	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.16	gi|118577173|ref|YP_876916.1|	-	0.0018	17.5	3.4	0.033	13.4	0.1	2.6	2	1	1	3	3	3	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|118577173|ref|YP_876916.1|	-	0.028	13.4	0.4	0.028	13.4	0.3	2.0	1	1	1	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
DUF561	PF04481.7	gi|118577173|ref|YP_876916.1|	-	0.058	12.3	3.1	0.44	9.4	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
PcrB	PF01884.12	gi|118577173|ref|YP_876916.1|	-	0.064	12.4	6.1	0.64	9.2	0.2	3.9	3	2	2	5	5	5	0	PcrB	family
PEP_mutase	PF13714.1	gi|118577173|ref|YP_876916.1|	-	0.07	12.3	1.4	0.086	12.0	0.1	1.8	2	0	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
PIN	PF01850.16	gi|118577174|ref|YP_876917.1|	-	2.4e-07	31.1	0.0	0.0022	18.3	0.0	2.2	2	0	0	2	2	2	2	PIN	domain
PIN_3	PF13470.1	gi|118577174|ref|YP_876917.1|	-	1e-05	26.1	0.0	1.5e-05	25.5	0.0	1.6	1	1	0	1	1	1	1	PIN	domain
zinc-ribbons_6	PF07191.7	gi|118577174|ref|YP_876917.1|	-	0.19	11.5	2.8	0.2	11.4	1.0	1.7	2	0	0	2	2	2	0	zinc-ribbons
zinc_ribbon_2	PF13240.1	gi|118577174|ref|YP_876917.1|	-	0.64	9.5	5.0	1.3	8.6	3.5	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
PIN	PF01850.16	gi|118577175|ref|YP_876918.1|	-	2.5e-10	40.7	0.1	2.6e-05	24.5	0.0	2.1	2	0	0	2	2	2	2	PIN	domain
PIN_3	PF13470.1	gi|118577175|ref|YP_876918.1|	-	5.9e-06	26.9	0.0	2.1e-05	25.1	0.0	1.9	1	1	0	1	1	1	1	PIN	domain
DZR	PF12773.2	gi|118577175|ref|YP_876918.1|	-	0.0076	16.0	1.8	0.018	14.8	1.2	1.6	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-C3HC4_3	PF13920.1	gi|118577175|ref|YP_876918.1|	-	0.022	14.4	2.7	0.039	13.6	1.9	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc-ribbons_6	PF07191.7	gi|118577175|ref|YP_876918.1|	-	0.098	12.4	3.8	0.12	12.1	1.6	1.9	2	0	0	2	2	2	0	zinc-ribbons
zf-RING_4	PF14570.1	gi|118577175|ref|YP_876918.1|	-	0.098	12.2	4.6	0.35	10.5	3.3	2.0	1	1	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
DUF736	PF05284.7	gi|118577175|ref|YP_876918.1|	-	0.15	11.9	0.0	0.27	11.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF736)
zf-C2H2_jaz	PF12171.3	gi|118577175|ref|YP_876918.1|	-	8	6.7	7.7	6.6	7.0	0.2	3.9	5	0	0	5	5	5	0	Zinc-finger	double-stranded	RNA-binding
PDT	PF00800.13	gi|118577178|ref|YP_876921.1|	-	9.1e-44	149.1	0.0	1.1e-43	148.8	0.0	1.1	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|118577178|ref|YP_876921.1|	-	4.1e-06	26.1	0.0	7e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	ACT	domain
ECR1_N	PF14382.1	gi|118577179|ref|YP_876922.1|	-	1.2e-05	24.4	0.0	2e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
Lar_restr_allev	PF14354.1	gi|118577179|ref|YP_876922.1|	-	0.031	14.5	0.4	3	8.1	0.0	2.7	2	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
Borrelia_REV	PF03978.8	gi|118577180|ref|YP_876923.1|	-	0.013	15.2	0.2	0.014	15.0	0.1	1.1	1	0	0	1	1	1	0	Borrelia	burgdorferi	REV	protein
PhoU	PF01895.14	gi|118577180|ref|YP_876923.1|	-	0.032	14.6	0.3	0.035	14.5	0.2	1.1	1	0	0	1	1	1	0	PhoU	domain
Snapin_Pallidin	PF14712.1	gi|118577180|ref|YP_876923.1|	-	0.11	12.7	0.2	0.12	12.6	0.2	1.1	1	0	0	1	1	1	0	Snapin/Pallidin
ADH_zinc_N	PF00107.21	gi|118577181|ref|YP_876924.1|	-	1.4e-30	105.4	0.0	2.5e-30	104.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|118577181|ref|YP_876924.1|	-	6.7e-22	77.3	1.5	7.3e-22	77.2	0.2	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|118577181|ref|YP_876924.1|	-	1.8e-20	74.0	0.0	3e-20	73.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TPR_11	PF13414.1	gi|118577182|ref|YP_876925.1|	-	6.1e-23	80.2	0.2	8e-12	44.6	0.3	3.6	3	1	1	4	4	4	3	TPR	repeat
TPR_16	PF13432.1	gi|118577182|ref|YP_876925.1|	-	2.2e-18	66.3	0.0	8.3e-07	29.5	0.0	3.2	1	1	3	4	4	4	4	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|118577182|ref|YP_876925.1|	-	8.6e-18	62.7	0.0	0.00013	21.6	0.0	5.3	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|118577182|ref|YP_876925.1|	-	2.7e-17	62.8	0.0	4.1e-05	23.8	0.0	3.4	1	1	3	4	4	4	4	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|118577182|ref|YP_876925.1|	-	1.4e-16	59.2	0.0	0.00013	21.4	0.1	4.6	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|118577182|ref|YP_876925.1|	-	3.2e-12	45.9	0.0	0.62	10.8	0.1	5.3	2	2	3	5	5	5	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|118577182|ref|YP_876925.1|	-	1.3e-10	41.1	0.1	6.4e-08	32.4	0.0	3.4	2	1	2	4	4	4	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|118577182|ref|YP_876925.1|	-	8.4e-10	37.7	0.0	0.0026	17.4	0.1	4.3	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|118577182|ref|YP_876925.1|	-	8.3e-09	34.9	0.0	0.029	14.5	0.0	4.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|118577182|ref|YP_876925.1|	-	2.1e-08	33.9	0.0	6.3e-05	22.7	0.2	2.4	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|118577182|ref|YP_876925.1|	-	3.1e-08	32.8	0.1	0.035	13.8	0.0	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|118577182|ref|YP_876925.1|	-	3.4e-08	33.4	0.0	4	8.1	0.0	5.9	5	1	1	6	6	6	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|118577182|ref|YP_876925.1|	-	6.4e-06	26.2	0.0	0.0086	16.1	0.0	2.5	1	1	3	4	4	4	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_10	PF13374.1	gi|118577182|ref|YP_876925.1|	-	3e-05	23.8	0.1	0.68	9.9	0.0	3.6	4	0	0	4	4	4	2	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|118577182|ref|YP_876925.1|	-	3.1e-05	23.7	0.1	2.3	8.1	0.0	4.2	4	1	0	4	4	4	1	Fis1	C-terminal	tetratricopeptide	repeat
TPR_3	PF07720.7	gi|118577182|ref|YP_876925.1|	-	0.0041	16.8	0.6	0.015	15.0	0.0	2.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
PPR	PF01535.15	gi|118577182|ref|YP_876925.1|	-	0.044	13.7	3.3	22	5.3	0.0	4.0	3	1	1	4	4	4	0	PPR	repeat
TPR_4	PF07721.9	gi|118577182|ref|YP_876925.1|	-	0.062	13.7	0.3	2.3	8.9	0.0	3.0	3	0	0	3	3	2	0	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|118577182|ref|YP_876925.1|	-	0.12	11.0	0.0	0.57	8.8	0.0	1.8	2	0	0	2	2	2	0	NMDA	receptor-regulated	protein	1
SNAP	PF14938.1	gi|118577182|ref|YP_876925.1|	-	0.13	11.4	0.0	2.4	7.2	0.0	2.1	1	1	1	2	2	2	0	Soluble	NSF	attachment	protein,	SNAP
Coatomer_E	PF04733.9	gi|118577182|ref|YP_876925.1|	-	0.14	11.3	0.0	0.2	10.8	0.0	1.1	1	0	0	1	1	1	0	Coatomer	epsilon	subunit
Diphthamide_syn	PF01866.12	gi|118577183|ref|YP_876926.1|	-	1.3e-78	264.3	0.0	1.6e-78	264.0	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
CAP	PF00188.21	gi|118577184|ref|YP_876927.1|	-	8.9e-18	64.9	0.1	4.2e-17	62.7	0.0	2.0	2	0	0	2	2	2	1	Cysteine-rich	secretory	protein	family
MethyltransfD12	PF02086.10	gi|118577185|ref|YP_876928.1|	-	5.4e-08	32.6	0.0	0.00029	20.3	0.0	2.2	2	0	0	2	2	2	2	D12	class	N6	adenine-specific	DNA	methyltransferase
DUF979	PF06166.7	gi|118577186|ref|YP_876929.1|	-	0.023	13.6	0.8	0.033	13.1	0.2	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF979)
NfeD	PF01957.13	gi|118577186|ref|YP_876929.1|	-	0.044	13.9	3.5	1.1	9.3	0.0	2.6	3	0	0	3	3	3	0	NfeD-like	C-terminal,	partner-binding
DUF3481	PF11980.3	gi|118577186|ref|YP_876929.1|	-	0.045	13.5	0.3	0.16	11.7	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3481)
DctM	PF06808.7	gi|118577186|ref|YP_876929.1|	-	0.058	11.9	1.8	0.096	11.2	1.3	1.3	1	0	0	1	1	1	0	DctM-like	transporters
MLANA	PF14991.1	gi|118577186|ref|YP_876929.1|	-	0.08	12.9	1.7	7.2	6.6	0.2	2.6	3	0	0	3	3	3	0	Protein	melan-A
BacA	PF02673.13	gi|118577186|ref|YP_876929.1|	-	0.63	9.1	5.7	0.36	9.9	1.0	2.0	1	1	0	2	2	2	0	Bacitracin	resistance	protein	BacA
DUF3169	PF11368.3	gi|118577186|ref|YP_876929.1|	-	0.88	8.7	12.7	0.015	14.4	3.5	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
DUF1673	PF07895.6	gi|118577186|ref|YP_876929.1|	-	3.8	6.9	10.0	0.15	11.5	0.8	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
Pox_P21	PF05313.7	gi|118577186|ref|YP_876929.1|	-	3.8	6.7	10.6	16	4.6	4.4	2.4	1	1	1	2	2	2	0	Poxvirus	P21	membrane	protein
DUF1743	PF08489.6	gi|118577188|ref|YP_876931.1|	-	4.6e-29	100.5	0.0	7.4e-29	99.9	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
C1_1	PF00130.17	gi|118577188|ref|YP_876931.1|	-	0.013	15.2	1.3	0.03	14.0	0.9	1.6	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
tRNA_anti_2	PF13742.1	gi|118577188|ref|YP_876931.1|	-	0.07	12.9	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.20	gi|118577188|ref|YP_876931.1|	-	0.1	12.4	0.0	0.21	11.4	0.0	1.4	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
GSDH	PF07995.6	gi|118577189|ref|YP_876932.1|	-	7.5e-79	265.1	0.0	1.1e-78	264.6	0.0	1.2	1	0	0	1	1	1	1	Glucose	/	Sorbosone	dehydrogenase
HMG-CoA_red	PF00368.13	gi|118577190|ref|YP_876933.1|	-	1.7e-80	270.4	8.7	2.4e-80	270.0	6.0	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
Phospholip_A2_1	PF00068.14	gi|118577193|ref|YP_876936.1|	-	0.0082	16.3	0.3	0.014	15.6	0.2	1.5	1	0	0	1	1	1	1	Phospholipase	A2
ACT_4	PF13291.1	gi|118577193|ref|YP_876936.1|	-	0.073	13.4	0.1	0.19	12.1	0.0	1.7	2	0	0	2	2	2	0	ACT	domain
DUF4047	PF13256.1	gi|118577196|ref|YP_876939.1|	-	0.077	12.9	0.4	0.2	11.6	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4047)
HTH_27	PF13463.1	gi|118577197|ref|YP_876940.1|	-	0.025	14.8	0.0	0.22	11.8	0.0	2.5	4	0	0	4	4	4	0	Winged	helix	DNA-binding	domain
DUF3024	PF11225.3	gi|118577197|ref|YP_876940.1|	-	0.043	13.7	0.1	0.14	12.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3024)
HisG	PF01634.13	gi|118577199|ref|YP_876942.1|	-	2.5e-36	124.7	0.0	3.3e-36	124.3	0.0	1.1	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|118577199|ref|YP_876942.1|	-	1.3e-12	47.4	0.0	2.6e-12	46.5	0.0	1.5	1	0	0	1	1	1	1	HisG,	C-terminal	domain
Histidinol_dh	PF00815.15	gi|118577200|ref|YP_876943.1|	-	1.3e-130	435.7	0.1	1.5e-130	435.5	0.0	1.0	1	0	0	1	1	1	1	Histidinol	dehydrogenase
Aminotran_1_2	PF00155.16	gi|118577201|ref|YP_876944.1|	-	5.4e-42	144.0	0.0	6.5e-42	143.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.8	gi|118577201|ref|YP_876944.1|	-	0.0003	19.5	0.0	0.00049	18.8	0.0	1.3	1	0	0	1	1	1	1	Allinase
Hydrolase_like	PF13242.1	gi|118577202|ref|YP_876945.1|	-	2.2e-05	24.0	0.0	4.2e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|118577202|ref|YP_876945.1|	-	4.3e-05	23.7	0.0	0.038	14.2	0.0	2.3	2	0	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|118577202|ref|YP_876945.1|	-	0.0053	17.1	0.0	2.4	8.5	0.0	2.2	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
IGPD	PF00475.13	gi|118577203|ref|YP_876946.1|	-	4.7e-49	165.9	0.4	5.7e-49	165.7	0.2	1.1	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
GATase	PF00117.23	gi|118577204|ref|YP_876947.1|	-	5.6e-33	114.0	0.0	6.5e-33	113.8	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|118577204|ref|YP_876947.1|	-	5.2e-06	26.0	0.0	1.1e-05	24.9	0.0	1.6	1	1	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.9	gi|118577204|ref|YP_876947.1|	-	0.045	13.3	0.1	0.074	12.6	0.1	1.5	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
His_biosynth	PF00977.16	gi|118577205|ref|YP_876948.1|	-	3.5e-68	229.2	2.7	4e-68	229.1	1.9	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NMO	PF03060.10	gi|118577205|ref|YP_876948.1|	-	1.1e-05	24.7	2.5	0.018	14.1	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
IMPDH	PF00478.20	gi|118577205|ref|YP_876948.1|	-	0.00026	20.0	1.7	0.035	13.0	0.2	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
TMP-TENI	PF02581.12	gi|118577205|ref|YP_876948.1|	-	0.0017	17.4	0.2	1.2	8.2	0.0	2.3	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
IGPS	PF00218.16	gi|118577205|ref|YP_876948.1|	-	0.0026	16.8	0.0	0.16	10.9	0.0	2.1	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
PcrB	PF01884.12	gi|118577205|ref|YP_876948.1|	-	0.0034	16.6	0.9	0.17	11.1	0.1	2.1	2	0	0	2	2	2	1	PcrB	family
Dus	PF01207.12	gi|118577205|ref|YP_876948.1|	-	0.0087	14.9	0.3	0.74	8.5	0.0	2.1	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
NanE	PF04131.9	gi|118577205|ref|YP_876948.1|	-	0.014	14.3	0.3	0.03	13.2	0.2	1.7	1	1	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.16	gi|118577205|ref|YP_876948.1|	-	0.017	14.1	0.7	1.1	8.1	0.2	2.1	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
SOR_SNZ	PF01680.12	gi|118577205|ref|YP_876948.1|	-	0.068	12.7	0.1	2.3	7.7	0.0	2.2	2	0	0	2	2	2	0	SOR/SNZ	family
ThiG	PF05690.9	gi|118577205|ref|YP_876948.1|	-	0.36	9.8	2.5	13	4.7	0.2	2.5	2	1	1	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
His_biosynth	PF00977.16	gi|118577206|ref|YP_876949.1|	-	2.3e-72	242.9	0.4	2.7e-72	242.7	0.3	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.12	gi|118577206|ref|YP_876949.1|	-	8.8e-07	28.0	0.0	0.00015	20.7	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
ThiG	PF05690.9	gi|118577206|ref|YP_876949.1|	-	3.3e-05	23.0	0.4	0.0002	20.5	0.0	1.9	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|118577206|ref|YP_876949.1|	-	0.0001	21.6	0.2	0.00021	20.6	0.1	1.5	1	1	0	1	1	1	1	PcrB	family
NMO	PF03060.10	gi|118577206|ref|YP_876949.1|	-	0.0018	17.5	0.9	0.14	11.2	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
TMP-TENI	PF02581.12	gi|118577206|ref|YP_876949.1|	-	0.0051	15.9	0.2	0.27	10.3	0.0	2.2	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase/TENI
DHO_dh	PF01180.16	gi|118577206|ref|YP_876949.1|	-	0.0051	15.7	0.1	0.0084	15.0	0.0	1.3	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
PRA-CH	PF01502.13	gi|118577207|ref|YP_876950.1|	-	2.2e-35	120.1	0.1	2.7e-35	119.8	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
PALP	PF00291.20	gi|118577209|ref|YP_876952.1|	-	5.9e-63	212.9	0.3	6.9e-63	212.7	0.2	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
NinF	PF05810.7	gi|118577209|ref|YP_876952.1|	-	0.13	12.1	0.2	0.3	10.9	0.2	1.6	1	0	0	1	1	1	0	NinF	protein
ThiF	PF00899.16	gi|118577210|ref|YP_876953.1|	-	4.1e-45	152.9	0.8	7.4e-45	152.1	0.6	1.4	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|118577210|ref|YP_876953.1|	-	9.3e-16	57.2	0.0	1.8e-15	56.3	0.0	1.4	1	0	0	1	1	1	1	MoeZ/MoeB	domain
ThiS	PF02597.15	gi|118577210|ref|YP_876953.1|	-	1.6e-09	38.0	0.0	4.1e-09	36.7	0.0	1.7	1	0	0	1	1	1	1	ThiS	family
Saccharop_dh	PF03435.13	gi|118577210|ref|YP_876953.1|	-	2.9e-05	23.2	0.3	4.3e-05	22.6	0.2	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Shikimate_DH	PF01488.15	gi|118577210|ref|YP_876953.1|	-	0.00014	21.9	0.1	0.00028	21.0	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|118577210|ref|YP_876953.1|	-	0.0019	17.4	0.1	0.0031	16.6	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|118577210|ref|YP_876953.1|	-	0.012	15.8	0.4	0.032	14.4	0.3	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
F420_oxidored	PF03807.12	gi|118577210|ref|YP_876953.1|	-	0.069	13.5	0.6	0.52	10.7	0.3	2.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
YmgB	PF10798.3	gi|118577211|ref|YP_876954.1|	-	0.0073	16.0	0.2	0.54	10.1	0.0	3.6	2	0	0	2	2	2	1	Biofilm	development	protein	YmgB/AriR
DUF2254	PF10011.4	gi|118577212|ref|YP_876955.1|	-	0.028	12.9	7.7	0.034	12.6	5.3	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
ATG27	PF09451.5	gi|118577212|ref|YP_876955.1|	-	0.1	11.8	0.5	0.2	10.8	0.4	1.4	1	0	0	1	1	1	0	Autophagy-related	protein	27
KbaA	PF14089.1	gi|118577212|ref|YP_876955.1|	-	0.95	8.9	15.5	0.064	12.8	3.4	2.4	1	1	0	2	2	2	0	KinB-signalling	pathway	activation	in	sporulation
RhgB_N	PF09284.5	gi|118577216|ref|YP_876959.1|	-	0.12	11.6	0.0	0.14	11.4	0.0	1.1	1	0	0	1	1	1	0	Rhamnogalacturonase	B,	N-terminal
HTH_Tnp_4	PF13613.1	gi|118577219|ref|YP_876962.1|	-	0.0026	17.2	0.0	0.0045	16.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
DDE_Tnp_4	PF13359.1	gi|118577219|ref|YP_876962.1|	-	0.0042	16.6	0.0	0.0075	15.8	0.0	1.4	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
Amidinotransf	PF02274.12	gi|118577219|ref|YP_876962.1|	-	0.022	13.8	0.0	0.036	13.1	0.0	1.3	1	0	0	1	1	1	0	Amidinotransferase
DUF2570	PF10828.3	gi|118577219|ref|YP_876962.1|	-	0.21	11.2	1.2	4.3	6.9	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2570)
HTH_Tnp_4	PF13613.1	gi|118577220|ref|YP_876963.1|	-	0.0045	16.5	0.0	1.1	8.8	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	of	DDE	superfamily	endonuclease
OTOS	PF15182.1	gi|118577220|ref|YP_876963.1|	-	0.018	14.6	0.0	0.04	13.5	0.0	1.5	1	0	0	1	1	1	0	Otospiralin
HTH_Crp_2	PF13545.1	gi|118577220|ref|YP_876963.1|	-	0.035	13.8	0.1	0.56	10.0	0.0	2.8	2	1	1	3	3	3	0	Crp-like	helix-turn-helix	domain
HTH_Tnp_4	PF13613.1	gi|118577221|ref|YP_876964.1|	-	0.00036	20.0	0.0	0.00073	19.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
DDE_Tnp_1_5	PF13737.1	gi|118577226|ref|YP_876969.1|	-	2e-05	24.6	0.0	3.1e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
Mt_ATP-synt_D	PF05873.7	gi|118577227|ref|YP_876970.1|	-	0.1	12.2	2.7	0.12	12.0	0.3	2.1	2	0	0	2	2	2	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
Fork_head	PF00250.13	gi|118577227|ref|YP_876970.1|	-	0.3	11.1	3.3	0.94	9.5	0.7	2.9	3	0	0	3	3	3	0	Fork	head	domain
Toprim_4	PF13662.1	gi|118577228|ref|YP_876971.1|	-	0.00078	19.4	0.0	0.0016	18.3	0.0	1.5	1	0	0	1	1	1	1	Toprim	domain
Ribosomal_S17	PF00366.15	gi|118577228|ref|YP_876971.1|	-	0.039	13.9	1.2	0.039	13.9	0.8	2.4	3	0	0	3	3	3	0	Ribosomal	protein	S17
PIG-P	PF08510.7	gi|118577228|ref|YP_876971.1|	-	2.4	7.8	7.4	0.72	9.4	2.4	2.1	2	1	0	2	2	2	0	PIG-P
Peptidase_S8	PF00082.17	gi|118577230|ref|YP_876973.1|	-	1e-30	106.9	2.3	1.4e-30	106.4	0.4	2.0	2	0	0	2	2	2	1	Subtilase	family
DUF1034	PF06280.7	gi|118577230|ref|YP_876973.1|	-	9e-05	22.8	0.0	0.0012	19.2	0.0	2.4	2	0	0	2	2	2	1	Fn3-like	domain	(DUF1034)
EF-hand_5	PF13202.1	gi|118577230|ref|YP_876973.1|	-	0.03	13.6	0.0	2.9	7.3	0.0	2.8	2	0	0	2	2	2	0	EF	hand
NPCBM_assoc	PF10633.4	gi|118577230|ref|YP_876973.1|	-	0.061	13.3	0.2	1.4	9.0	0.1	2.5	2	0	0	2	2	2	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
EF-hand_1	PF00036.27	gi|118577230|ref|YP_876973.1|	-	0.11	11.9	1.7	3.5	7.1	0.1	3.2	3	0	0	3	3	3	0	EF	hand
EF-hand_6	PF13405.1	gi|118577230|ref|YP_876973.1|	-	0.18	11.7	0.3	7.7	6.6	0.1	2.8	2	0	0	2	2	2	0	EF-hand	domain