# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DNA_RNApol_7kD PF03604.8 AJA91819.1 - 1.1e-06 27.9 3.0 2.2e-06 27.0 2.1 1.5 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit TFIIS_C PF01096.13 AJA91819.1 - 0.049 13.2 0.4 0.049 13.2 0.3 1.6 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) RCR PF12273.3 AJA91820.1 - 2 8.9 5.4 2.5 8.6 3.8 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Phage_GPD PF05954.6 AJA91820.1 - 2.1 7.4 7.6 2.4 7.2 5.3 1.1 1 0 0 1 1 1 0 Phage late control gene D protein (GPD) Lactamase_B_3 PF13483.1 AJA91821.1 - 6.3e-12 45.4 0.0 1.2e-11 44.5 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 AJA91821.1 - 2.5e-07 30.4 0.0 3.7e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 AJA91821.1 - 0.00049 19.7 0.1 0.00071 19.2 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Glu-tRNAGln PF02686.10 AJA91822.1 - 7.5e-06 25.6 0.2 1.1e-05 25.1 0.1 1.4 1 1 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit NifU_N PF01592.11 AJA91825.1 - 6e-26 90.8 0.0 7.2e-26 90.6 0.0 1.1 1 0 0 1 1 1 1 NifU-like N terminal domain SufE PF02657.10 AJA91825.1 - 0.00059 19.4 0.0 0.00076 19.1 0.0 1.2 1 0 0 1 1 1 1 Fe-S metabolism associated domain NTP_transferase PF00483.18 AJA91826.1 - 1.1e-56 191.9 0.0 1.5e-56 191.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 AJA91826.1 - 4.9e-10 39.7 0.0 6.5e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.19 AJA91826.1 - 2.3e-08 33.1 18.2 1.6e-06 27.3 4.5 4.1 1 1 2 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 AJA91826.1 - 0.0021 17.5 14.1 0.007 15.9 4.9 2.9 2 1 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase DUF2272 PF10030.4 AJA91826.1 - 0.22 10.9 0.4 1.1 8.6 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2272) Glycos_transf_2 PF00535.21 AJA91826.1 - 0.72 9.5 4.6 0.11 12.2 0.2 1.8 2 1 0 2 2 2 0 Glycosyl transferase family 2 Cpn60_TCP1 PF00118.19 AJA91827.1 - 1.9e-164 547.8 19.4 2.2e-164 547.6 13.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.12 AJA91827.1 - 8.3e-05 22.3 1.1 0.44 10.2 0.0 2.8 3 0 0 3 3 3 2 DAK2 domain UDG PF03167.14 AJA91828.1 - 5.9e-38 129.7 0.0 8.2e-38 129.2 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Epimerase_2 PF02350.14 AJA91828.1 - 0.00083 18.2 0.0 0.0012 17.7 0.0 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase C1_1 PF00130.17 AJA91828.1 - 0.17 11.6 4.9 4.2 7.1 0.1 2.7 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) SBP_bac_5 PF00496.17 AJA91829.1 - 3.1e-26 92.0 7.9 1e-20 73.9 0.0 3.0 2 1 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle ScpA_ScpB PF02616.9 AJA91831.1 - 1.8e-15 57.1 6.6 2.8e-07 30.3 0.3 2.1 1 1 1 2 2 2 2 ScpA/B protein DUF2582 PF10771.4 AJA91831.1 - 0.0018 18.1 0.0 0.0034 17.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2582) Rad21_Rec8 PF04824.11 AJA91831.1 - 0.034 13.3 0.0 0.083 12.0 0.0 1.7 1 1 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein UPF0081 PF03652.10 AJA91832.1 - 0.00069 19.7 0.1 0.02 14.9 0.1 2.2 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0081) DUF460 PF04312.8 AJA91832.1 - 0.0014 18.1 0.1 0.003 17.0 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF460) UPF0182 PF03699.8 AJA91833.1 - 8e-35 119.9 12.3 1.4e-33 115.9 8.5 2.1 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0182) TMEM171 PF15471.1 AJA91835.1 - 0.22 10.2 2.4 0.37 9.5 1.7 1.3 1 0 0 1 1 1 0 Transmembrane protein family 171 DUF3408 PF11888.3 AJA91835.1 - 1.6 8.6 7.7 0.48 10.3 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3408) UPF0052 PF01933.13 AJA91836.1 - 7.8e-47 160.0 0.0 1.2e-46 159.3 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Flavodoxin_1 PF00258.20 AJA91837.1 - 3.1e-22 79.1 0.1 3.6e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 AJA91837.1 - 0.014 15.3 0.0 0.032 14.2 0.0 1.5 2 0 0 2 2 2 0 Flavodoxin domain Flavodoxin_3 PF12641.2 AJA91837.1 - 0.052 12.9 0.1 0.13 11.7 0.0 1.8 2 1 0 2 2 2 0 Flavodoxin domain Apc5 PF12862.2 AJA91837.1 - 0.059 13.2 0.1 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 AAA PF00004.24 AJA91838.1 - 7.6e-39 132.9 0.0 2e-38 131.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 AJA91838.1 - 4.4e-07 30.1 0.1 1.1e-05 25.5 0.0 3.0 2 1 1 3 3 2 1 AAA domain AAA_2 PF07724.9 AJA91838.1 - 4.9e-07 29.8 0.0 9.5e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) MIT PF04212.13 AJA91838.1 - 7e-07 29.0 4.4 7e-07 29.0 3.0 2.0 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain AAA_16 PF13191.1 AJA91838.1 - 9.7e-06 25.6 0.5 0.0067 16.4 0.0 3.7 2 1 2 4 4 4 1 AAA ATPase domain AAA_33 PF13671.1 AJA91838.1 - 2e-05 24.5 0.0 0.0004 20.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain Vps4_C PF09336.5 AJA91838.1 - 2.7e-05 23.9 0.1 9e-05 22.2 0.0 1.9 2 0 0 2 2 1 1 Vps4 C terminal oligomerisation domain RuvB_N PF05496.7 AJA91838.1 - 2.9e-05 23.2 0.0 0.00015 20.8 0.0 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 AJA91838.1 - 6.6e-05 22.8 0.0 0.00014 21.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.9 AJA91838.1 - 9.8e-05 22.1 0.1 0.0023 17.6 0.1 2.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_25 PF13481.1 AJA91838.1 - 0.00011 21.7 0.3 0.0035 16.7 0.1 2.5 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 AJA91838.1 - 0.00013 22.7 0.0 0.00059 20.6 0.0 2.3 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 AJA91838.1 - 0.00021 20.4 0.0 0.0007 18.7 0.0 1.9 2 0 0 2 2 2 1 Zeta toxin AAA_24 PF13479.1 AJA91838.1 - 0.00028 20.5 0.1 0.0014 18.2 0.0 2.1 2 1 1 3 3 3 1 AAA domain AAA_19 PF13245.1 AJA91838.1 - 0.0015 18.2 0.0 0.0062 16.2 0.0 2.0 2 0 0 2 2 2 1 Part of AAA domain Arch_ATPase PF01637.13 AJA91838.1 - 0.0016 18.1 0.1 2.3 7.8 0.0 2.9 1 1 2 3 3 3 2 Archaeal ATPase Mg_chelatase PF01078.16 AJA91838.1 - 0.0036 16.4 0.1 0.0076 15.4 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI KAP_NTPase PF07693.9 AJA91838.1 - 0.0053 15.7 0.0 0.031 13.2 0.0 1.9 1 1 1 2 2 2 1 KAP family P-loop domain IstB_IS21 PF01695.12 AJA91838.1 - 0.0055 16.1 0.0 0.011 15.1 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.8 AJA91838.1 - 0.011 14.4 0.0 0.02 13.6 0.0 1.4 1 1 0 1 1 1 0 TIP49 C-terminus AAA_18 PF13238.1 AJA91838.1 - 0.018 15.3 0.0 0.046 14.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 AJA91838.1 - 0.018 14.6 0.0 0.2 11.2 0.0 2.4 3 0 0 3 3 3 0 NACHT domain RNA_helicase PF00910.17 AJA91838.1 - 0.051 13.7 0.1 0.31 11.2 0.0 2.3 2 1 0 2 2 2 0 RNA helicase HTH_Tnp_Tc3_2 PF01498.13 AJA91838.1 - 0.061 13.3 0.2 0.75 9.8 0.0 2.3 2 0 0 2 2 2 0 Transposase DASH_Spc34 PF08657.5 AJA91838.1 - 0.061 12.9 1.7 0.1 12.2 1.2 1.3 1 0 0 1 1 1 0 DASH complex subunit Spc34 AAA_11 PF13086.1 AJA91838.1 - 0.067 12.7 0.1 0.27 10.7 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA-ATPase_like PF09820.4 AJA91838.1 - 0.072 12.2 0.1 0.56 9.3 0.0 2.3 3 0 0 3 3 3 0 Predicted AAA-ATPase Sigma54_activat PF00158.21 AJA91838.1 - 0.083 12.3 0.0 0.3 10.5 0.0 1.8 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_10 PF12846.2 AJA91838.1 - 0.095 12.1 0.0 6.5 6.0 0.0 2.4 2 0 0 2 2 2 0 AAA-like domain KaiC PF06745.8 AJA91838.1 - 0.097 11.7 0.1 1.3 8.0 0.0 2.4 2 1 1 3 3 3 0 KaiC ResIII PF04851.10 AJA91838.1 - 0.11 12.3 0.1 0.36 10.6 0.0 1.9 2 1 1 3 3 2 0 Type III restriction enzyme, res subunit PhoH PF02562.11 AJA91838.1 - 0.16 11.1 0.1 0.31 10.2 0.1 1.4 1 0 0 1 1 1 0 PhoH-like protein Zn_Tnp_IS1595 PF12760.2 AJA91839.1 - 0.044 13.5 0.2 0.079 12.7 0.1 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2H2_4 PF13894.1 AJA91839.1 - 0.22 11.9 2.7 0.37 11.2 1.9 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger UPF0547 PF10571.4 AJA91839.1 - 0.63 9.7 3.2 1.5 8.6 2.2 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 HTH_20 PF12840.2 AJA91840.1 - 2.7e-11 43.0 0.5 1e-10 41.2 0.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 AJA91840.1 - 1e-06 28.2 0.7 1.2e-05 24.8 0.3 2.5 2 1 0 2 2 2 1 Bacterial regulatory protein, arsR family FUR PF01475.14 AJA91840.1 - 0.00019 21.3 2.0 0.00039 20.3 1.3 1.7 1 1 0 1 1 1 1 Ferric uptake regulator family DUF2240 PF09999.4 AJA91840.1 - 0.025 14.0 0.3 0.037 13.4 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) DUF387 PF04079.11 AJA91840.1 - 0.032 13.5 1.7 0.18 11.1 0.1 2.4 1 1 1 2 2 2 0 Putative transcriptional regulators (Ypuh-like) HTH_12 PF08461.5 AJA91840.1 - 0.048 13.3 0.3 0.14 11.9 0.2 1.8 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Hydrolase_3 PF08282.7 AJA91840.1 - 0.35 10.3 4.5 4.6 6.7 2.9 1.8 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Lactamase_B_2 PF12706.2 AJA91841.1 - 8.9e-31 106.9 0.0 1.2e-30 106.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 AJA91841.1 - 4.4e-10 39.5 0.0 1.5e-08 34.5 0.0 2.3 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 AJA91841.1 - 9.9e-05 21.7 0.0 0.00017 20.9 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease Chromate_transp PF02417.10 AJA91842.1 - 0.15 11.6 3.6 0.19 11.3 2.5 1.0 1 0 0 1 1 1 0 Chromate transporter DUF4401 PF14351.1 AJA91842.1 - 0.16 10.9 2.9 0.19 10.7 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) Abi PF02517.11 AJA91842.1 - 0.16 12.1 0.8 0.22 11.6 0.5 1.2 1 0 0 1 1 1 0 CAAX protease self-immunity DUF4013 PF13197.1 AJA91842.1 - 0.22 10.8 8.7 0.65 9.3 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4013) DUF4181 PF13789.1 AJA91842.1 - 0.32 10.9 3.3 0.15 12.0 0.5 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) YqhR PF11085.3 AJA91842.1 - 0.36 10.3 2.2 0.43 10.0 1.5 1.1 1 0 0 1 1 1 0 Conserved membrane protein YqhR YrhC PF14143.1 AJA91842.1 - 0.47 10.4 3.5 7.3 6.6 1.3 2.0 1 1 1 2 2 2 0 YrhC-like protein DUF1418 PF07214.7 AJA91842.1 - 0.49 10.0 5.5 0.23 11.1 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) Glycos_transf_4 PF00953.16 AJA91842.1 - 0.55 10.0 4.1 0.64 9.7 2.8 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 4 TcpE PF12648.2 AJA91842.1 - 1.1 9.4 4.0 0.76 9.9 1.8 1.5 1 1 0 1 1 1 0 TcpE family DUF983 PF06170.7 AJA91842.1 - 2.9 8.0 6.1 2.5 8.2 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF983) DUF347 PF03988.7 AJA91842.1 - 4.4 7.2 5.5 7.6 6.5 0.4 2.2 1 1 1 2 2 2 0 Repeat of Unknown Function (DUF347) Trm112p PF03966.11 AJA91843.1 - 5.2e-08 33.1 2.4 5.2e-08 33.1 1.7 1.8 2 1 0 2 2 2 1 Trm112p-like protein Elf1 PF05129.8 AJA91843.1 - 0.017 14.8 0.2 0.017 14.8 0.1 1.6 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.1 AJA91843.1 - 0.051 13.8 0.1 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-C2H2_jaz PF12171.3 AJA91843.1 - 1.1 9.4 5.7 0.44 10.7 0.7 2.2 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding HTH_3 PF01381.17 AJA91845.1 - 2.6e-05 23.9 0.2 0.00024 20.9 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 AJA91845.1 - 0.00051 20.0 0.2 0.0061 16.5 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain Fe_dep_repress PF01325.14 AJA91845.1 - 0.094 12.6 0.3 3.8 7.5 0.0 2.8 2 1 1 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain Cro PF09048.5 AJA91845.1 - 0.14 11.8 0.0 0.74 9.5 0.0 1.9 2 0 0 2 2 2 0 Cro Rpr2 PF04032.11 AJA91845.1 - 0.22 11.3 1.1 1.7 8.5 0.1 2.4 1 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain F420_ligase PF01996.11 AJA91846.1 - 3.5e-69 232.3 0.6 3.9e-69 232.1 0.4 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase HpcH_HpaI PF03328.9 AJA91847.1 - 1.8e-46 157.8 0.0 2.1e-46 157.6 0.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.1 AJA91847.1 - 9.9e-13 47.6 0.4 3.1e-06 26.2 0.0 2.1 1 1 1 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold PK PF00224.16 AJA91847.1 - 0.0031 16.1 0.8 0.0054 15.4 0.5 1.3 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain ETRAMP PF09716.5 AJA91847.1 - 1.1 9.2 6.5 7.1 6.6 4.5 2.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Proteasome PF00227.21 AJA91848.1 - 1e-53 181.4 0.1 1.1e-53 181.3 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit DNA_methylase PF00145.12 AJA91849.1 - 6e-59 199.8 0.1 1e-58 199.1 0.0 1.2 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Methyltransf_26 PF13659.1 AJA91849.1 - 0.067 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF3892 PF13031.1 AJA91851.1 - 9.7e-05 22.7 0.9 0.00014 22.1 0.6 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3892) ASCH PF04266.9 AJA91851.1 - 0.019 15.3 1.3 0.75 10.2 0.3 2.2 1 1 0 2 2 2 0 ASCH domain DUF1287 PF06940.6 AJA91851.1 - 0.084 12.2 0.1 0.14 11.5 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1287) 2OG-FeII_Oxy_3 PF13640.1 AJA91852.1 - 1.7e-10 41.3 0.0 2.5e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.1 AJA91852.1 - 1.2e-06 28.7 0.0 3.4e-06 27.2 0.0 1.7 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Tet_JBP PF12851.2 AJA91852.1 - 0.0028 16.9 0.1 0.0047 16.2 0.0 1.5 1 1 0 1 1 1 1 Oxygenase domain of the 2OGFeDO superfamily ALIX_LYPXL_bnd PF13949.1 AJA91852.1 - 0.037 12.9 0.4 0.046 12.6 0.3 1.2 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Pox_C4_C10 PF03336.8 AJA91852.1 - 0.041 12.6 0.3 0.066 11.9 0.2 1.4 1 0 0 1 1 1 0 Poxvirus C4/C10 protein NAD_binding_2 PF03446.10 AJA91853.1 - 7.8e-42 142.8 2.1 1.3e-41 142.1 1.4 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.1 AJA91853.1 - 4.1e-21 75.2 0.1 8.4e-21 74.2 0.1 1.5 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.12 AJA91853.1 - 7.1e-09 35.9 0.3 2.1e-08 34.4 0.2 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 AJA91853.1 - 1.1e-06 27.9 0.2 1.8e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 AJA91853.1 - 4.2e-06 26.9 0.1 6.5e-06 26.2 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.7 AJA91853.1 - 5.4e-06 25.8 0.2 1e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain Rossmann-like PF10727.4 AJA91853.1 - 0.00014 21.6 0.2 0.00063 19.4 0.1 1.9 1 1 0 2 2 2 1 Rossmann-like domain ApbA PF02558.11 AJA91853.1 - 0.00019 20.9 0.1 0.00032 20.1 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.9 AJA91853.1 - 0.00053 19.4 0.7 0.0027 17.1 0.1 2.1 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.18 AJA91853.1 - 0.0011 18.6 0.3 0.012 15.3 0.1 2.5 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 AJA91853.1 - 0.0031 17.5 0.1 0.0075 16.2 0.1 1.7 1 0 0 1 1 1 1 NADH(P)-binding 3HCDH_N PF02737.13 AJA91853.1 - 0.0049 16.5 1.7 0.0081 15.8 0.2 2.2 3 1 1 4 4 4 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NmrA PF05368.8 AJA91853.1 - 0.013 14.7 0.1 0.02 14.1 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family TrkA_N PF02254.13 AJA91853.1 - 0.023 14.6 0.1 0.072 13.0 0.1 1.9 1 1 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.1 AJA91853.1 - 0.028 14.6 0.4 0.058 13.6 0.3 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding AraC_binding PF02311.14 AJA91855.1 - 0.075 12.7 0.0 0.095 12.3 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Rib_5-P_isom_A PF06026.9 AJA91856.1 - 4.7e-50 169.2 0.2 5.7e-50 169.0 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 AJA91856.1 - 1.2e-05 24.9 0.2 0.012 15.2 0.1 2.8 2 1 0 3 3 3 2 DeoR C terminal sensor domain Tubulin PF00091.20 AJA91858.1 - 3.7e-15 56.3 1.1 1.1e-13 51.4 0.2 2.3 1 1 1 2 2 2 2 Tubulin/FtsZ family, GTPase domain Copper-bind PF00127.15 AJA91859.1 - 3.8e-08 33.4 0.1 0.013 15.7 0.0 4.0 4 2 0 4 4 4 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 AJA91859.1 - 1.7e-06 27.8 0.0 0.0042 16.9 0.0 3.5 3 0 0 3 3 3 2 Cupredoxin-like domain A2M_N PF01835.14 AJA91859.1 - 0.0036 17.5 0.3 0.082 13.1 0.0 2.8 3 0 0 3 3 3 1 MG2 domain NAM-associated PF14303.1 AJA91859.1 - 0.68 10.2 2.6 1.1 9.6 1.8 1.2 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Glyco_hydro_3_C PF01915.17 AJA91859.1 - 0.84 9.1 5.3 1.4 8.3 3.7 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain ERM PF00769.14 AJA91859.1 - 1.2 8.5 9.5 1.7 8.1 6.6 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family BAT2_N PF07001.6 AJA91859.1 - 2.5 8.4 8.1 4.3 7.6 5.6 1.3 1 0 0 1 1 1 0 BAT2 N-terminus PAC2 PF09754.4 AJA91860.1 - 3.8e-19 69.4 0.0 4.7e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 PAC2 family MFS_1 PF07690.11 AJA91861.1 - 2.3e-25 89.0 42.2 8.4e-21 74.0 22.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Metallophos PF00149.23 AJA91862.1 - 1.5e-12 47.3 1.5 5.8e-11 42.1 0.0 2.2 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 AJA91862.1 - 9.9e-08 31.9 0.2 2.1e-07 30.9 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Epimerase_2 PF02350.14 AJA91862.1 - 0.0027 16.5 0.1 0.0062 15.3 0.0 1.5 2 0 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase ESAG1 PF03238.8 AJA91862.1 - 0.062 12.5 0.1 0.096 11.9 0.0 1.3 1 0 0 1 1 1 0 ESAG protein DNA_pol_E_B PF04042.11 AJA91862.1 - 0.092 11.9 0.3 0.34 10.1 0.2 1.9 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Metallophos_3 PF14582.1 AJA91862.1 - 0.11 11.6 0.1 0.61 9.2 0.1 2.0 1 1 1 2 2 2 0 Metallophosphoesterase, calcineurin superfamily DUF585 PF04522.7 AJA91862.1 - 0.12 11.6 0.0 12 5.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF585) Epimerase PF01370.16 AJA91863.1 - 5.7e-20 71.7 0.0 7.1e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 AJA91863.1 - 3.5e-12 46.6 0.0 4e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding 3Beta_HSD PF01073.14 AJA91863.1 - 3.1e-11 42.5 0.2 1.6e-10 40.1 0.1 2.0 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA91863.1 - 8.2e-10 38.0 0.0 1.1e-09 37.5 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 AJA91863.1 - 2.7e-09 36.3 0.0 2.6e-05 23.2 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.20 AJA91863.1 - 4e-05 23.5 0.0 0.01 15.7 0.0 2.2 1 1 1 2 2 2 2 short chain dehydrogenase Polysacc_synt_2 PF02719.10 AJA91863.1 - 0.0035 16.2 0.5 0.38 9.5 0.1 2.7 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein DapB_N PF01113.15 AJA91863.1 - 0.004 17.0 0.0 0.0084 16.0 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NmrA PF05368.8 AJA91863.1 - 0.033 13.4 0.0 0.13 11.4 0.0 1.9 2 0 0 2 2 2 0 NmrA-like family NAD_binding_5 PF07994.7 AJA91864.1 - 4.5e-44 151.1 0.0 1.3e-43 149.6 0.0 1.6 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.12 AJA91864.1 - 5.6e-29 100.2 0.0 9.2e-29 99.5 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase MS_channel PF00924.13 AJA91864.1 - 0.11 11.7 0.1 0.3 10.3 0.0 1.7 2 0 0 2 2 2 0 Mechanosensitive ion channel TBP PF00352.16 AJA91865.1 - 3.1e-60 199.5 0.0 1.2e-29 101.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 AJA91865.1 - 3.8e-05 23.6 0.0 0.13 12.3 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Oxidored_q1 PF00361.15 AJA91866.1 - 2.2e-65 220.6 19.5 2.2e-65 220.6 13.5 2.8 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains LRR19-TM PF15176.1 AJA91866.1 - 0.13 11.9 0.1 6.6 6.4 0.0 2.5 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain CopC PF04234.7 AJA91867.1 - 8.7e-13 48.7 0.0 2.4e-12 47.3 0.0 1.8 1 0 0 1 1 1 1 CopC domain CopD PF05425.8 AJA91867.1 - 1.6e-12 47.5 0.5 1.6e-12 47.5 0.4 2.8 2 1 0 2 2 2 1 Copper resistance protein D SGL PF08450.7 AJA91867.1 - 2.1e-10 40.3 0.1 0.0071 15.7 0.0 4.0 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region YtkA PF13115.1 AJA91867.1 - 0.0054 17.0 0.3 0.14 12.5 0.0 2.9 3 0 0 3 3 3 1 YtkA-like Reg_prop PF07494.6 AJA91867.1 - 0.014 15.3 10.7 2e+02 2.5 0.0 7.6 8 0 0 8 8 8 0 Two component regulator propeller PPC PF04151.10 AJA91867.1 - 0.015 16.2 1.5 0.054 14.4 1.1 2.0 1 0 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain TerD PF02342.13 AJA91867.1 - 0.096 12.0 0.0 0.2 10.9 0.0 1.5 1 0 0 1 1 1 0 TerD domain DUF1625 PF07787.7 AJA91867.1 - 4.5 6.4 9.6 0.21 10.8 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1625) Myosin_N PF02736.14 AJA91869.1 - 0.43 10.2 4.3 1.1 8.9 0.2 3.4 4 0 0 4 4 4 0 Myosin N-terminal SH3-like domain DUF524 PF04411.7 AJA91870.1 - 0.00016 21.5 0.8 0.00024 20.9 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF524) GvpG PF05120.7 AJA91870.1 - 0.11 12.2 1.9 0.23 11.3 1.1 1.7 1 1 0 1 1 1 0 Gas vesicle protein G Anthrax_toxA PF03497.11 AJA91870.1 - 0.13 12.1 1.8 0.97 9.2 0.4 2.1 1 1 1 2 2 2 0 Anthrax toxin LF subunit THOC7 PF05615.8 AJA91870.1 - 0.14 12.4 7.7 0.23 11.7 5.3 1.4 1 0 0 1 1 1 0 Tho complex subunit 7 ABC1 PF03109.11 AJA91871.1 - 4e-24 84.8 0.2 1.4e-23 83.1 0.0 1.9 2 0 0 2 2 2 1 ABC1 family RIO1 PF01163.17 AJA91871.1 - 0.00086 18.6 1.4 0.0013 18.1 0.3 1.8 2 0 0 2 2 2 1 RIO1 family APH PF01636.18 AJA91871.1 - 0.0014 18.3 0.0 0.023 14.4 0.0 2.3 2 0 0 2 2 2 1 Phosphotransferase enzyme family WaaY PF06176.6 AJA91871.1 - 0.005 16.0 0.4 0.005 16.0 0.3 1.9 2 0 0 2 2 2 1 Lipopolysaccharide core biosynthesis protein (WaaY) Pkinase PF00069.20 AJA91871.1 - 0.023 13.8 1.1 0.071 12.2 0.8 1.8 1 1 0 1 1 1 0 Protein kinase domain Ribosomal_L13 PF00572.13 AJA91872.1 - 5.2e-23 81.4 0.0 6.7e-23 81.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L13 A2M_N PF01835.14 AJA91873.1 - 0.042 14.1 0.0 13 6.1 0.0 2.8 2 1 1 3 3 3 0 MG2 domain Glycolytic PF00274.14 AJA91874.1 - 0.0021 16.4 0.1 0.0023 16.3 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I DUF3958 PF13125.1 AJA91874.1 - 0.11 12.4 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) Glyco_trans_1_2 PF13524.1 AJA91875.1 - 6.7e-06 26.2 0.0 1.1e-05 25.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 AJA91875.1 - 0.013 15.6 0.0 0.34 11.0 0.0 2.4 2 1 0 2 2 2 0 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 AJA91875.1 - 0.052 12.9 0.2 0.22 10.9 0.0 2.1 3 0 0 3 3 3 0 Glycosyl transferases group 1 4HBT PF03061.17 AJA91877.1 - 6.7e-17 61.3 0.1 1e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.14 AJA91877.1 - 7.8e-05 22.0 0.2 0.00012 21.4 0.1 1.2 1 0 0 1 1 1 1 MaoC like domain DUF4442 PF14539.1 AJA91877.1 - 0.00051 20.0 0.4 0.0023 17.9 0.2 1.8 1 1 1 2 2 2 2 Domain of unknown function (DUF4442) 4HBT_2 PF13279.1 AJA91877.1 - 0.051 14.0 0.0 0.058 13.8 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF3426 PF11906.3 AJA91878.1 - 3.2e-12 46.3 0.0 4.1e-07 29.7 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF3426) DUF2393 PF09624.5 AJA91878.1 - 3.3e-05 23.4 7.4 0.022 14.3 0.9 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2393) DUF3157 PF11355.3 AJA91878.1 - 0.0047 16.2 0.2 0.41 9.9 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF3157) DUF4352 PF11611.3 AJA91878.1 - 0.019 15.1 4.8 0.36 10.9 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4352) tRNA_anti-codon PF01336.20 AJA91879.1 - 0.0001 22.0 0.2 0.00014 21.6 0.1 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-like PF12869.2 AJA91879.1 - 0.044 13.2 1.0 0.057 12.9 0.7 1.2 1 0 0 1 1 1 0 tRNA_anti-like HlyD_2 PF12700.2 AJA91879.1 - 0.065 12.3 2.7 0.49 9.5 0.1 1.9 1 1 1 2 2 2 0 HlyD family secretion protein Cadherin-like PF12733.2 AJA91879.1 - 0.76 10.1 2.9 4.3 7.6 2.0 1.9 1 1 0 1 1 1 0 Cadherin-like beta sandwich domain FKBP_C PF00254.23 AJA91880.1 - 7.4e-12 45.1 2.9 5.5e-11 42.3 0.4 2.8 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase OstA PF03968.9 AJA91880.1 - 0.093 12.6 0.1 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 OstA-like protein Ribosomal_S8e PF01201.17 AJA91881.1 - 4.1e-23 81.9 5.5 4.4e-23 81.8 3.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e PRP3 PF08572.5 AJA91881.1 - 0.088 12.1 2.4 0.11 11.8 1.6 1.1 1 0 0 1 1 1 0 pre-mRNA processing factor 3 (PRP3) DUF4518 PF15008.1 AJA91883.1 - 0.054 12.5 0.1 0.082 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4518) DUF329 PF03884.9 AJA91883.1 - 0.13 11.8 2.7 0.25 10.9 1.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF329) zinc_ribbon_2 PF13240.1 AJA91883.1 - 0.37 10.3 6.4 0.91 9.0 4.4 1.7 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA91883.1 - 1.2 8.3 5.3 3.3 7.0 3.6 1.8 1 1 1 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.21 AJA91884.1 - 1.1e-06 28.6 9.1 7.5e-05 22.8 1.1 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 AJA91884.1 - 1.1e-05 25.4 5.8 0.015 15.5 0.4 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zinc_ribbon_2 PF13240.1 AJA91884.1 - 0.00048 19.5 3.1 0.0059 16.0 2.3 2.2 1 1 0 1 1 1 1 zinc-ribbon domain Zn-ribbon_8 PF09723.5 AJA91884.1 - 0.0014 18.5 3.8 0.11 12.4 0.1 2.3 2 0 0 2 2 2 1 Zinc ribbon domain zinc_ribbon_4 PF13717.1 AJA91884.1 - 0.0017 18.0 8.5 0.0033 17.0 0.3 2.5 3 0 0 3 3 2 1 zinc-ribbon domain zf-C2HC_2 PF13913.1 AJA91884.1 - 0.0023 17.5 2.5 0.0023 17.5 1.8 3.1 3 0 0 3 3 3 1 zinc-finger of a C2HC-type zinc_ribbon_5 PF13719.1 AJA91884.1 - 0.0026 17.2 8.8 0.0046 16.5 0.3 2.5 3 0 0 3 3 3 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA91884.1 - 0.0029 16.7 5.1 0.034 13.3 3.0 2.2 1 1 2 3 3 3 3 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 AJA91884.1 - 0.0037 16.5 2.1 1 8.7 0.0 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding DZR PF12773.2 AJA91884.1 - 0.0046 16.7 4.0 0.0083 15.9 2.8 1.6 1 1 0 1 1 1 1 Double zinc ribbon DUF678 PF05077.7 AJA91884.1 - 0.0066 16.4 2.8 0.015 15.2 0.5 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF678) Ribosomal_S27e PF01667.12 AJA91884.1 - 0.0078 15.7 0.3 1.3 8.6 0.0 2.2 2 0 0 2 2 2 1 Ribosomal protein S27 RNA_POL_M_15KD PF02150.11 AJA91884.1 - 0.012 15.2 0.8 2.1 8.1 0.1 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-C2H2_6 PF13912.1 AJA91884.1 - 0.013 15.4 1.8 0.013 15.4 1.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Lar_restr_allev PF14354.1 AJA91884.1 - 0.016 15.4 2.2 1.6 9.1 0.1 2.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar UPF0547 PF10571.4 AJA91884.1 - 0.018 14.7 0.5 1.1 9.0 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 C1_1 PF00130.17 AJA91884.1 - 0.019 14.6 2.1 0.062 13.0 1.5 1.9 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) XPA_N PF01286.13 AJA91884.1 - 0.021 14.4 2.6 1.4 8.6 0.2 2.3 2 0 0 2 2 2 0 XPA protein N-terminal HypA PF01155.14 AJA91884.1 - 0.028 14.1 4.8 0.3 10.7 3.3 2.0 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Prok-RING_1 PF14446.1 AJA91884.1 - 0.028 14.1 6.1 1.6 8.4 0.9 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF2688 PF10892.3 AJA91884.1 - 0.033 13.8 0.8 2 8.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) ADK_lid PF05191.9 AJA91884.1 - 0.033 13.8 2.7 1.8 8.2 0.1 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid DUF4187 PF13821.1 AJA91884.1 - 0.054 13.1 0.2 0.29 10.7 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) DUF1610 PF07754.6 AJA91884.1 - 0.06 13.4 2.9 0.31 11.1 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-IS66 PF13005.2 AJA91884.1 - 0.069 13.1 5.8 0.25 11.3 0.1 2.6 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 TFIIS_C PF01096.13 AJA91884.1 - 0.086 12.4 4.2 2.1 8.0 0.1 2.4 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-HYPF PF07503.7 AJA91884.1 - 0.09 12.2 5.8 1.1 8.7 0.8 2.3 2 0 0 2 2 2 0 HypF finger OrfB_Zn_ribbon PF07282.6 AJA91884.1 - 0.098 12.3 8.5 0.13 11.9 4.7 1.9 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2H2_2 PF12756.2 AJA91884.1 - 0.1 12.7 4.8 1.7 8.7 0.2 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) CpXC PF14353.1 AJA91884.1 - 0.12 12.3 3.2 1.9 8.4 2.2 2.0 1 1 1 2 2 2 0 CpXC protein Rpr2 PF04032.11 AJA91884.1 - 0.13 12.1 1.6 0.17 11.7 1.1 1.3 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-trcl PF13451.1 AJA91884.1 - 0.14 11.8 2.9 5.2 6.7 0.2 2.4 2 0 0 2 2 2 0 Probable zinc-binding domain IBR PF01485.16 AJA91884.1 - 0.18 11.6 4.1 0.74 9.7 2.9 1.9 1 1 0 1 1 1 0 IBR domain Terminase_GpA PF05876.7 AJA91884.1 - 0.19 10.0 1.1 0.21 9.8 0.7 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) zf-H2C2_2 PF13465.1 AJA91884.1 - 0.21 11.9 8.9 0.61 10.4 0.3 3.2 3 0 0 3 3 3 0 Zinc-finger double domain Elf1 PF05129.8 AJA91884.1 - 0.21 11.2 4.4 1.7 8.4 3.1 2.1 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Cytochrom_CIII PF02085.11 AJA91884.1 - 0.25 11.4 7.0 0.3 11.2 4.8 1.1 1 0 0 1 1 1 0 Class III cytochrome C family DUF983 PF06170.7 AJA91884.1 - 0.35 10.9 2.2 10 6.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) DNA_RNApol_7kD PF03604.8 AJA91884.1 - 0.4 10.1 8.5 4.5 6.8 0.5 2.5 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit PyrI_C PF02748.10 AJA91884.1 - 0.41 10.1 2.4 5.1 6.6 0.1 2.2 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-CCHC_3 PF13917.1 AJA91884.1 - 0.42 10.3 3.8 1.1 9.0 0.2 2.5 3 0 0 3 3 2 0 Zinc knuckle GCC2_GCC3 PF07699.8 AJA91884.1 - 0.44 10.1 4.7 1.1 8.9 0.1 2.3 2 1 0 2 2 2 0 GCC2 and GCC3 DUF2082 PF09855.4 AJA91884.1 - 0.48 10.2 2.4 12 5.8 1.6 2.1 1 1 0 1 1 1 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-CHY PF05495.7 AJA91884.1 - 0.53 10.4 6.5 1.2 9.3 4.5 1.6 1 1 0 1 1 1 0 CHY zinc finger zf-BED PF02892.10 AJA91884.1 - 0.71 9.6 11.8 0.37 10.5 1.1 2.7 1 1 1 2 2 2 0 BED zinc finger zf-FCS PF06467.9 AJA91884.1 - 0.98 9.1 4.3 0.73 9.5 0.6 2.0 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-C2H2_3 PF13878.1 AJA91884.1 - 0.99 9.0 9.5 4.9 6.7 1.7 2.5 2 1 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO FYVE PF01363.16 AJA91884.1 - 1.5 8.7 8.1 12 5.8 5.6 2.0 1 1 0 1 1 1 0 FYVE zinc finger Zn_Tnp_IS1595 PF12760.2 AJA91884.1 - 3.2 7.6 7.6 2.7 7.8 3.8 1.8 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Zn_ribbon_recom PF13408.1 AJA91884.1 - 4.4 7.6 7.5 19 5.6 5.2 1.9 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain DUF4379 PF14311.1 AJA91884.1 - 5.8 6.8 10.0 0.42 10.4 1.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4379) DBI_PRT PF02277.12 AJA91885.1 - 5.2e-31 107.9 0.0 8.1e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase EMG1 PF03587.9 AJA91886.1 - 6.9e-46 156.0 2.0 7.8e-46 155.9 1.4 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Methyltrn_RNA_3 PF02598.12 AJA91887.1 - 7e-43 147.0 0.0 8.1e-43 146.8 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase Methyltrn_RNA_4 PF09936.4 AJA91887.1 - 0.0067 15.9 0.0 0.9 9.0 0.0 2.2 2 0 0 2 2 2 2 SAM-dependent RNA methyltransferase SpoU_methylase PF00588.14 AJA91887.1 - 0.011 15.6 0.0 0.85 9.4 0.0 2.2 2 0 0 2 2 2 0 SpoU rRNA Methylase family SIS_2 PF13580.1 AJA91888.1 - 2.4e-27 95.3 1.5 3.7e-27 94.7 1.0 1.3 1 0 0 1 1 1 1 SIS domain SIS PF01380.17 AJA91888.1 - 4.8e-07 29.4 0.7 6.1e-05 22.6 0.0 2.3 1 1 0 2 2 2 2 SIS domain Fer4_12 PF13353.1 AJA91888.1 - 0.0017 18.4 0.2 0.0038 17.3 0.1 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain RYDR_ITPR PF01365.16 AJA91888.1 - 0.06 12.5 0.2 2.7 7.1 0.1 2.2 2 0 0 2 2 2 0 RIH domain ADH_zinc_N PF00107.21 AJA91888.1 - 0.067 12.7 0.0 1.5 8.4 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase NAD_binding_2 PF03446.10 AJA91888.1 - 0.12 12.1 0.3 1.9 8.2 0.1 2.0 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Epimerase PF01370.16 AJA91889.1 - 4.9e-38 130.8 0.0 6.1e-38 130.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 AJA91889.1 - 8.5e-31 106.8 0.0 1.1e-30 106.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 AJA91889.1 - 1.3e-19 69.9 0.9 1.7e-19 69.6 0.6 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 AJA91889.1 - 1.8e-17 63.1 0.6 1.3e-16 60.3 0.4 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 AJA91889.1 - 1.4e-12 47.0 0.0 3.1e-09 36.1 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.1 AJA91889.1 - 3.1e-07 30.5 0.0 4.6e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding O-FucT PF10250.4 AJA91889.1 - 0.0027 16.8 0.0 0.0049 16.0 0.0 1.4 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase Archaeal_AmoA PF12942.2 AJA91890.1 - 1.6e-83 279.0 6.2 1.8e-83 278.8 4.3 1.0 1 0 0 1 1 1 1 Archaeal ammonia monooxygenase subunit A (AmoA) BCD PF15461.1 AJA91890.1 - 0.067 12.6 3.0 0.092 12.1 2.1 1.2 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase Pho88 PF10032.4 AJA91891.1 - 0.003 16.7 0.1 0.0041 16.3 0.1 1.2 1 0 0 1 1 1 1 Phosphate transport (Pho88) DUF137 PF02006.11 AJA91892.1 - 1.1e-63 213.7 3.8 1.8e-63 213.1 2.6 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF137 TPP_enzyme_M PF00205.17 AJA91892.1 - 0.00015 21.5 0.9 0.0013 18.4 0.3 2.3 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain DUF2344 PF10105.4 AJA91892.1 - 0.064 12.7 2.8 2.7 7.4 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) FctA PF12892.2 AJA91892.1 - 1.2 10.0 6.3 0.33 11.7 0.9 2.3 2 1 0 2 2 2 0 T surface-antigen of pili CTP-dep_RFKase PF01982.11 AJA91893.1 - 7e-42 141.8 0.2 9.8e-42 141.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_20 PF12840.2 AJA91893.1 - 0.00011 21.9 0.0 0.0002 21.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.1 AJA91893.1 - 0.0017 18.4 0.2 0.04 14.0 0.0 2.8 3 0 0 3 3 3 1 Helix-turn-helix domain MarR_2 PF12802.2 AJA91893.1 - 0.0022 17.6 0.0 0.0062 16.1 0.0 1.8 2 0 0 2 2 2 1 MarR family MarR PF01047.17 AJA91893.1 - 0.0022 17.6 0.2 0.011 15.4 0.0 2.2 1 1 1 2 2 2 1 MarR family TrmB PF01978.14 AJA91893.1 - 0.0029 17.2 0.2 0.011 15.3 0.0 2.1 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 AJA91893.1 - 0.0082 15.5 0.5 0.035 13.4 0.0 2.3 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.1 AJA91893.1 - 0.013 15.2 0.1 0.028 14.1 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RepL PF05732.6 AJA91893.1 - 0.027 13.6 1.6 0.065 12.4 0.0 2.0 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) DUF4364 PF14277.1 AJA91893.1 - 0.04 13.5 1.4 0.068 12.7 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) LexA_DNA_bind PF01726.11 AJA91893.1 - 0.13 11.8 0.1 0.45 10.1 0.0 1.9 1 0 0 1 1 1 0 LexA DNA binding domain Na_Ca_ex PF01699.19 AJA91894.1 - 8e-42 142.1 39.8 2.6e-22 78.9 10.5 2.3 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Spore_YhaL PF14147.1 AJA91894.1 - 0.047 13.1 0.4 0.22 10.9 0.3 2.2 1 0 0 1 1 1 0 Sporulation protein YhaL MerC PF03203.9 AJA91894.1 - 0.48 10.7 21.6 0.32 11.3 2.8 4.0 1 1 3 4 4 4 0 MerC mercury resistance protein DUF2371 PF10177.4 AJA91894.1 - 1.6 8.5 0.0 1.6 8.5 0.0 3.4 4 1 1 5 5 5 0 Uncharacterised conserved protein (DUF2371) Ribosomal_L16 PF00252.13 AJA91895.1 - 5.2e-24 84.4 1.7 6.8e-24 84.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DeoC PF01791.4 AJA91896.1 - 6.1e-20 71.5 0.1 7.8e-20 71.1 0.1 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase ThiG PF05690.9 AJA91896.1 - 0.0077 15.3 0.1 0.017 14.1 0.0 1.4 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG tRNA_bind PF01588.15 AJA91897.1 - 4.8e-24 84.0 0.0 5.5e-24 83.8 0.0 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain DUF3990 PF13151.1 AJA91899.1 - 0.0028 17.0 0.1 0.0095 15.3 0.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3990) HpcH_HpaI PF03328.9 AJA91900.1 - 1.6e-06 27.2 0.0 2.1e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.16 AJA91900.1 - 2.1e-05 23.2 0.0 2.4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain DUF217 PF02697.9 AJA91900.1 - 0.03 14.5 0.6 0.03 14.5 0.4 2.3 3 0 0 3 3 3 0 Uncharacterized ACR, COG1753 ABC_trans_N PF14510.1 AJA91900.1 - 0.08 13.0 0.1 0.62 10.1 0.0 2.1 2 0 0 2 2 2 0 ABC-transporter extracellular N-terminal DPRP PF04244.8 AJA91901.1 - 4e-81 271.7 1.7 4e-81 271.7 1.2 2.0 2 0 0 2 2 2 1 Deoxyribodipyrimidine photo-lyase-related protein FAD_binding_7 PF03441.9 AJA91901.1 - 7.7e-09 35.1 0.0 1.5e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase NYN_YacP PF05991.6 AJA91901.1 - 0.0013 18.4 0.1 0.0029 17.3 0.1 1.5 1 0 0 1 1 1 1 YacP-like NYN domain Rootletin PF15035.1 AJA91901.1 - 0.56 10.1 4.1 12 5.8 0.3 2.4 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion PEP_mutase PF13714.1 AJA91903.1 - 1e-55 188.5 0.0 1.1e-55 188.4 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.16 AJA91903.1 - 1.1e-14 53.6 0.2 2e-14 52.7 0.1 1.5 1 0 0 1 1 1 1 Isocitrate lyase family NOP5NT PF08156.8 AJA91903.1 - 0.031 14.4 0.6 0.085 13.0 0.4 1.7 1 0 0 1 1 1 0 NOP5NT (NUC127) domain DUF1297 PF06973.7 AJA91905.1 - 6e-75 250.6 0.2 1.2e-74 249.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 AJA91905.1 - 5.4e-47 158.6 0.0 1.1e-46 157.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) DHquinase_I PF01487.10 AJA91906.1 - 5.1e-53 180.0 0.0 5.6e-53 179.8 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase NOP5NT PF08156.8 AJA91906.1 - 0.022 14.8 0.9 2.1 8.5 0.5 2.6 1 1 1 2 2 2 0 NOP5NT (NUC127) domain Ribosomal_S3_C PF00189.15 AJA91907.1 - 1.7e-14 53.8 0.1 3.5e-14 52.7 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 AJA91907.1 - 6.2e-14 51.3 1.1 8.5e-14 50.8 0.0 1.8 2 0 0 2 2 2 1 KH domain KH_1 PF00013.24 AJA91907.1 - 0.18 11.4 0.1 0.18 11.4 0.1 3.1 3 1 0 3 3 3 0 KH domain KH_3 PF13014.1 AJA91907.1 - 0.36 10.5 4.7 0.56 9.9 0.4 3.1 3 0 0 3 3 3 0 KH domain GTP_EFTU_D2 PF03144.20 AJA91908.1 - 8.6e-10 38.5 0.1 2e-09 37.4 0.0 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 AJA91908.1 - 0.0003 20.3 0.7 0.0011 18.5 0.2 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 4 T2SE PF00437.15 AJA91909.1 - 5.1e-15 55.1 0.0 7.3e-15 54.5 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 AJA91909.1 - 3.5e-07 29.7 0.0 1.3e-06 27.9 0.0 2.0 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 AJA91909.1 - 2.2e-05 24.0 0.9 5e-05 22.8 0.0 2.1 2 0 0 2 2 1 1 KH domain AAA_16 PF13191.1 AJA91909.1 - 0.00021 21.3 0.0 0.00041 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 AJA91909.1 - 0.0003 21.6 0.4 0.0015 19.3 0.2 2.3 2 1 0 2 2 1 1 AAA domain AAA_14 PF13173.1 AJA91909.1 - 0.00057 19.7 0.0 0.0014 18.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 AJA91909.1 - 0.00087 18.9 0.0 0.0017 18.0 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_29 PF13555.1 AJA91909.1 - 0.0016 17.9 0.1 0.004 16.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.1 AJA91909.1 - 0.0021 18.3 0.0 0.006 16.8 0.0 1.9 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 AJA91909.1 - 0.0024 16.7 0.0 0.004 15.9 0.0 1.3 1 0 0 1 1 1 1 ArgK protein KH_2 PF07650.12 AJA91909.1 - 0.0074 15.8 0.0 0.022 14.3 0.0 1.8 1 0 0 1 1 1 1 KH domain NB-ARC PF00931.17 AJA91909.1 - 0.014 14.2 0.0 0.023 13.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Zeta_toxin PF06414.7 AJA91909.1 - 0.016 14.3 0.0 0.028 13.5 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.10 AJA91909.1 - 0.019 14.6 0.0 0.088 12.5 0.0 2.1 2 0 0 2 2 2 0 NTPase AAA_5 PF07728.9 AJA91909.1 - 0.031 13.9 0.0 0.056 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.1 AJA91909.1 - 0.038 13.9 0.0 0.062 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.22 AJA91909.1 - 0.043 14.1 0.0 0.093 13.0 0.0 1.6 1 0 0 1 1 1 0 ABC transporter KH_5 PF13184.1 AJA91909.1 - 0.047 13.5 0.4 0.28 11.0 0.0 2.4 3 0 0 3 3 2 0 NusA-like KH domain AAA PF00004.24 AJA91909.1 - 0.05 13.8 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.13 AJA91909.1 - 0.053 13.0 0.0 0.08 12.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.1 AJA91909.1 - 0.053 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.5 AJA91909.1 - 0.059 12.5 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_33 PF13671.1 AJA91909.1 - 0.061 13.2 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 AJA91909.1 - 0.068 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.1 AJA91909.1 - 0.072 12.4 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain UPF0079 PF02367.12 AJA91909.1 - 0.076 12.6 0.0 0.19 11.3 0.0 1.7 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 IstB_IS21 PF01695.12 AJA91909.1 - 0.096 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.1 AJA91909.1 - 0.16 11.5 0.0 0.31 10.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain KH_4 PF13083.1 AJA91909.1 - 0.22 11.1 1.4 0.47 10.1 0.0 2.2 2 0 0 2 2 1 0 KH domain Nodulin_late PF07127.6 AJA91910.1 - 0.19 11.8 2.3 0.27 11.3 1.6 1.3 1 0 0 1 1 1 0 Late nodulin protein RNase_H PF00075.19 AJA91911.1 - 1.8e-14 54.2 0.0 2e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.1 AJA91911.1 - 2.8e-08 33.4 0.0 3.7e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like VPEP PF07589.6 AJA91912.1 - 0.21 11.5 3.2 0.22 11.4 0.4 2.1 2 0 0 2 2 2 0 PEP-CTERM motif PetM PF08041.6 AJA91912.1 - 0.63 9.5 0.1 0.63 9.5 0.1 2.2 2 0 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 SHS2_Rpb7-N PF03876.12 AJA91914.1 - 3.9e-15 55.7 0.0 8.9e-15 54.5 0.0 1.6 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 AJA91914.1 - 4e-13 49.2 0.0 7.4e-13 48.4 0.0 1.4 1 0 0 1 1 1 1 S1 RNA binding domain S1_2 PF13509.1 AJA91914.1 - 0.0082 16.0 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 S1 domain BPL_C PF02237.12 AJA91914.1 - 0.037 13.7 0.0 0.081 12.6 0.0 1.5 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain Spt5-NGN PF03439.8 AJA91915.1 - 5.2e-19 67.7 0.0 8.7e-19 67.0 0.0 1.4 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 AJA91915.1 - 6.5e-07 28.8 0.3 1.5e-06 27.6 0.2 1.6 1 0 0 1 1 1 1 KOW motif NusG PF02357.14 AJA91915.1 - 0.011 15.9 0.0 0.035 14.3 0.0 1.9 1 1 0 1 1 1 0 Transcription termination factor nusG DUF2220 PF09983.4 AJA91915.1 - 0.049 12.7 0.0 0.062 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) Metallophos_2 PF12850.2 AJA91916.1 - 2.2e-12 47.0 0.1 3.2e-12 46.5 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 AJA91916.1 - 2.5e-12 46.6 0.5 4.6e-12 45.7 0.4 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase AA_kinase PF00696.23 AJA91917.1 - 2.6e-27 95.9 0.5 4.4e-27 95.1 0.3 1.4 1 0 0 1 1 1 1 Amino acid kinase family DUF4116 PF13475.1 AJA91917.1 - 0.0048 16.3 0.6 0.014 14.9 0.4 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4116) ACT PF01842.20 AJA91917.1 - 0.02 14.3 1.5 0.08 12.4 0.5 2.4 2 0 0 2 2 2 0 ACT domain tRNA-synt_1b PF00579.20 AJA91918.1 - 1.3e-28 99.9 0.0 2.3e-28 99.1 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 AJA91918.1 - 0.026 13.2 0.0 0.3 9.7 0.0 2.4 3 0 0 3 3 3 0 tRNA synthetases class I (K) Thy1 PF02511.10 AJA91919.1 - 1.3e-27 96.4 7.4 1.8e-15 56.7 3.9 3.3 1 1 2 3 3 3 2 Thymidylate synthase complementing protein RimK PF08443.6 AJA91920.1 - 6.4e-43 146.4 0.0 8.2e-43 146.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 AJA91920.1 - 8.1e-12 45.2 0.0 1.2e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 AJA91920.1 - 8.7e-11 41.2 0.1 1.1e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.9 AJA91920.1 - 2.2e-09 37.3 0.2 4.8e-09 36.2 0.1 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 AJA91920.1 - 1.4e-06 27.3 0.0 3.3e-06 26.0 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.17 AJA91920.1 - 1.6e-05 24.3 0.0 4.5e-05 22.8 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.1 AJA91920.1 - 0.00052 18.8 0.0 0.033 12.9 0.0 2.2 2 0 0 2 2 2 1 YheC/D like ATP-grasp ATP-grasp_5 PF13549.1 AJA91920.1 - 0.0015 17.8 0.0 0.0026 17.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 AJA91920.1 - 0.002 17.4 0.0 0.0037 16.5 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain UvrC_HhH_N PF08459.6 AJA91920.1 - 0.13 11.8 0.0 0.37 10.3 0.0 1.7 2 0 0 2 2 2 0 UvrC Helix-hairpin-helix N-terminal CutA1 PF03091.10 AJA91921.1 - 2.7e-34 116.8 1.5 3e-34 116.7 1.0 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein Aminotran_3 PF00202.16 AJA91922.1 - 6.7e-103 344.0 0.0 8.1e-103 343.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 AJA91922.1 - 6.5e-05 22.0 0.0 0.00011 21.2 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 AJA91922.1 - 0.058 12.1 0.0 0.085 11.5 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V RNA_binding PF01877.12 AJA91923.1 - 0.089 12.8 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 RNA binding FokI_N PF02981.10 AJA91923.1 - 0.13 11.8 0.1 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, recognition domain PCNA_N PF00705.13 AJA91924.1 - 6.2e-20 70.9 0.1 2.3e-19 69.1 0.0 1.8 1 1 1 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 AJA91924.1 - 5.2e-18 65.1 0.3 2.3e-16 59.8 0.0 2.6 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.11 AJA91924.1 - 3.7e-10 39.0 0.0 8.8e-05 21.4 0.0 2.1 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.8 AJA91924.1 - 0.0026 16.8 0.0 0.0035 16.4 0.0 1.1 1 0 0 1 1 1 1 Rad9 Hus1 PF04005.7 AJA91924.1 - 0.11 11.3 0.0 0.21 10.4 0.0 1.4 1 1 0 1 1 1 0 Hus1-like protein DUF4488 PF14869.1 AJA91924.1 - 0.17 11.4 1.1 0.59 9.7 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4488) His_biosynth PF00977.16 AJA91925.1 - 4e-67 225.8 1.4 4.5e-67 225.6 1.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.10 AJA91925.1 - 0.00091 18.4 0.0 0.0052 15.9 0.0 1.9 2 0 0 2 2 2 1 Nitronate monooxygenase Trp_syntA PF00290.15 AJA91925.1 - 0.0061 15.1 0.5 0.35 9.3 0.0 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain ThiG PF05690.9 AJA91925.1 - 0.009 15.1 0.0 0.024 13.7 0.0 1.6 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.7 AJA91925.1 - 0.033 13.2 0.8 0.053 12.5 0.1 1.7 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator PcrB PF01884.12 AJA91925.1 - 0.079 12.2 1.7 0.75 9.0 0.1 2.1 2 0 0 2 2 2 0 PcrB family NeuB PF03102.9 AJA91925.1 - 0.097 11.7 0.1 2.5 7.1 0.0 2.1 2 0 0 2 2 2 0 NeuB family Iron_traffic PF04362.9 AJA91926.1 - 1.1e-07 31.1 3.8 3.8e-07 29.4 2.6 1.9 1 1 0 1 1 1 1 Bacterial Fe(2+) trafficking zinc_ribbon_2 PF13240.1 AJA91926.1 - 0.0087 15.5 1.3 0.02 14.3 0.9 1.6 1 1 0 1 1 1 1 zinc-ribbon domain FYVE PF01363.16 AJA91926.1 - 0.055 13.3 1.0 0.079 12.8 0.7 1.3 1 0 0 1 1 1 0 FYVE zinc finger ZZ PF00569.12 AJA91926.1 - 0.079 12.5 0.8 0.15 11.6 0.5 1.5 1 1 0 1 1 1 0 Zinc finger, ZZ type zf-CHY PF05495.7 AJA91926.1 - 0.22 11.7 2.9 0.48 10.6 1.8 1.5 1 1 0 1 1 1 0 CHY zinc finger DUF3039 PF11238.3 AJA91926.1 - 0.94 8.9 4.4 0.65 9.4 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3039) Cys_rich_KTR PF14205.1 AJA91926.1 - 2.9 7.4 5.4 41 3.7 3.7 2.2 1 1 0 1 1 1 0 Cysteine-rich KTR PAC2 PF09754.4 AJA91927.1 - 1.3e-40 139.5 0.0 1.6e-40 139.3 0.0 1.1 1 0 0 1 1 1 1 PAC2 family Aminotran_3 PF00202.16 AJA91927.1 - 0.03 13.1 0.0 0.53 9.0 0.0 2.0 2 0 0 2 2 2 0 Aminotransferase class-III LysE PF01810.13 AJA91928.1 - 3.1e-27 95.0 16.3 3.6e-27 94.8 11.3 1.0 1 0 0 1 1 1 1 LysE type translocator SIS PF01380.17 AJA91929.1 - 1.2e-47 160.7 1.8 2.4e-27 95.1 0.5 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.1 AJA91929.1 - 1.3e-24 86.6 0.0 2.5e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 AJA91929.1 - 2.2e-20 72.6 0.0 4.6e-16 58.4 0.0 2.4 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 AJA91929.1 - 8.1e-18 64.3 0.2 2.5e-17 62.7 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.1 AJA91929.1 - 2.4e-09 36.2 0.1 4.6e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferases class-II SIS_2 PF13580.1 AJA91929.1 - 7.7e-07 28.9 3.1 5.5e-05 22.8 0.3 3.8 3 1 1 4 4 4 1 SIS domain TSCPD PF12637.2 AJA91929.1 - 0.014 15.3 0.0 0.042 13.7 0.0 1.8 1 0 0 1 1 1 0 TSCPD domain HAUS-augmin3 PF14932.1 AJA91929.1 - 0.045 12.9 0.1 0.045 12.9 0.1 1.8 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 UDPG_MGDP_dh_N PF03721.9 AJA91930.1 - 6.3e-05 22.4 0.0 0.24 10.7 0.0 2.7 3 0 0 3 3 3 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Glyco_trans_4_2 PF13477.1 AJA91930.1 - 0.00051 19.8 0.2 0.001 18.9 0.2 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like TrkA_N PF02254.13 AJA91930.1 - 0.016 15.1 0.0 0.062 13.2 0.0 1.9 2 0 0 2 2 2 0 TrkA-N domain TroA PF01297.12 AJA91931.1 - 1.3e-85 286.7 3.5 1.5e-85 286.5 2.4 1.1 1 0 0 1 1 1 1 Periplasmic solute binding protein family RRN3 PF05327.6 AJA91931.1 - 0.17 9.9 5.6 0.24 9.4 3.9 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 SKG6 PF08693.5 AJA91931.1 - 0.26 10.6 3.2 0.45 9.8 2.2 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF3915 PF13054.1 AJA91931.1 - 0.36 10.8 3.6 0.22 11.4 0.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3915) TRAP_alpha PF03896.11 AJA91931.1 - 2.1 7.2 5.7 3.4 6.5 4.0 1.5 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit SDA1 PF05285.7 AJA91931.1 - 3.5 6.8 12.3 4.9 6.3 8.5 1.1 1 0 0 1 1 1 0 SDA1 CDC45 PF02724.9 AJA91931.1 - 4.9 5.0 7.9 7.9 4.3 5.5 1.3 1 0 0 1 1 1 0 CDC45-like protein Ribosomal_S24e PF01282.14 AJA91932.1 - 1.9e-05 24.3 0.3 3.3e-05 23.6 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S24e DUF2360 PF10152.4 AJA91932.1 - 0.15 12.3 4.2 0.16 12.2 2.9 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein (DUF2360) DUF4512 PF14975.1 AJA91932.1 - 0.4 11.5 1.9 0.76 10.6 1.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4512) THUMP PF02926.12 AJA91933.1 - 1.5e-10 41.1 2.1 2.1e-10 40.6 1.5 1.2 1 0 0 1 1 1 1 THUMP domain DUF1959 PF09218.5 AJA91933.1 - 0.066 13.0 0.3 0.14 11.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1959) DUF1616 PF07760.6 AJA91933.1 - 0.1 11.6 0.7 0.15 11.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) CBM_4_9 PF02018.12 AJA91934.1 - 0.0036 17.2 0.0 0.0054 16.7 0.0 1.3 1 0 0 1 1 1 1 Carbohydrate binding domain HEAT_2 PF13646.1 AJA91935.1 - 1.2e-22 79.9 0.0 4.6e-15 55.6 0.0 2.3 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.17 AJA91935.1 - 1.4e-15 55.8 0.6 0.0031 17.4 0.0 4.2 4 0 0 4 4 4 4 HEAT repeat HEAT_EZ PF13513.1 AJA91935.1 - 1.7e-11 44.2 0.1 0.01 16.3 0.0 4.1 4 0 0 4 4 4 3 HEAT-like repeat HEAT_PBS PF03130.11 AJA91935.1 - 3.2e-09 36.3 0.0 0.12 12.9 0.0 4.3 4 0 0 4 4 4 3 PBS lyase HEAT-like repeat Arm PF00514.18 AJA91935.1 - 2.2e-05 24.1 0.2 0.42 10.5 0.0 3.7 4 0 0 4 4 4 2 Armadillo/beta-catenin-like repeat Cnd1 PF12717.2 AJA91935.1 - 0.0051 16.6 0.1 1.5 8.6 0.0 2.8 3 1 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.15 AJA91935.1 - 0.063 11.5 0.0 0.56 8.4 0.0 2.1 1 1 0 1 1 1 0 Adaptin N terminal region DUF4042 PF13251.1 AJA91935.1 - 0.13 11.7 0.0 14 5.1 0.0 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4042) HIT PF01230.18 AJA91936.1 - 7.9e-24 84.0 0.1 1e-23 83.6 0.1 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 AJA91936.1 - 4.9e-12 46.0 0.1 6e-12 45.8 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding AAA_26 PF13500.1 AJA91937.1 - 1.8e-39 135.4 0.0 2.1e-39 135.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.18 AJA91937.1 - 2.6e-09 36.7 0.1 3.8e-09 36.2 0.1 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.9 AJA91937.1 - 0.0026 17.4 0.3 0.1 12.3 0.0 2.5 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B DUF1611 PF07755.6 AJA91937.1 - 0.0026 16.4 0.2 0.033 12.8 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1611) PuR_N PF09182.5 AJA91937.1 - 0.062 12.9 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal PI3K_p85B PF02192.11 AJA91938.1 - 0.038 13.4 0.5 0.04 13.3 0.3 1.1 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain ADH_zinc_N PF00107.21 AJA91939.1 - 1.7e-31 108.4 0.1 4.2e-31 107.1 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.7 AJA91939.1 - 1.2e-23 82.9 0.1 2e-23 82.2 0.1 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 AJA91939.1 - 1.2e-14 55.2 0.0 2e-14 54.5 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase HALZ PF02183.13 AJA91940.1 - 0.0022 17.6 4.5 0.0042 16.7 3.1 1.5 1 0 0 1 1 1 1 Homeobox associated leucine zipper TetR_C_8 PF14278.1 AJA91941.1 - 0.16 12.3 3.1 3 8.2 0.1 2.8 3 0 0 3 3 3 0 Transcriptional regulator C-terminal region VWA_2 PF13519.1 AJA91942.1 - 1.3e-33 116.5 0.0 1.6e-33 116.2 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 AJA91942.1 - 1.6e-25 89.8 0.1 2.4e-25 89.3 0.1 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain BatA PF07584.6 AJA91942.1 - 2e-10 40.7 1.1 2.2e-10 40.5 0.1 1.6 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_3 PF13768.1 AJA91942.1 - 5.2e-06 26.2 0.0 1.1e-05 25.1 0.0 1.5 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF1194 PF06707.6 AJA91942.1 - 0.0023 16.9 0.3 0.012 14.6 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1194) VWA_CoxE PF05762.9 AJA91942.1 - 0.0062 15.7 0.0 0.017 14.2 0.0 1.6 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein vWA-TerF-like PF10138.4 AJA91942.1 - 0.0071 16.1 0.0 0.017 14.9 0.0 1.7 1 1 0 1 1 1 1 vWA found in TerF C terminus Ssl1 PF04056.9 AJA91942.1 - 0.0083 15.7 0.0 0.029 13.9 0.0 1.8 2 0 0 2 2 2 1 Ssl1-like ANF_receptor PF01094.23 AJA91942.1 - 0.049 12.4 0.0 0.078 11.7 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region DUF4131 PF13567.1 AJA91942.1 - 0.058 12.8 0.1 0.24 10.7 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Ribosomal_L37e PF01907.14 AJA91943.1 - 3.2e-21 74.8 9.4 3.8e-21 74.6 6.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e OrfB_Zn_ribbon PF07282.6 AJA91943.1 - 0.0073 15.9 1.7 0.0095 15.5 1.2 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.14 AJA91943.1 - 0.014 15.0 0.4 0.016 14.9 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DZR PF12773.2 AJA91943.1 - 0.018 14.8 0.7 0.023 14.5 0.5 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.3 AJA91943.1 - 0.019 14.8 3.5 0.024 14.5 2.4 1.2 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_RNApol_7kD PF03604.8 AJA91943.1 - 0.041 13.3 1.0 0.041 13.3 0.7 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.5 AJA91943.1 - 0.05 13.5 2.1 0.52 10.3 0.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain Stc1 PF12898.2 AJA91943.1 - 0.054 13.5 0.7 0.061 13.3 0.5 1.1 1 0 0 1 1 1 0 Stc1 domain Ribosomal_S14 PF00253.16 AJA91943.1 - 0.061 12.7 5.8 0.15 11.4 0.1 2.1 1 1 1 2 2 2 0 Ribosomal protein S14p/S29e zinc_ribbon_6 PF14599.1 AJA91943.1 - 0.12 12.2 1.3 0.14 11.9 0.9 1.3 1 0 0 1 1 1 0 Zinc-ribbon zf-Mss51 PF13824.1 AJA91943.1 - 0.13 12.0 4.8 1.7 8.5 0.2 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ribbon_3 PF13248.1 AJA91943.1 - 0.14 11.3 2.5 0.38 10.0 1.8 1.6 1 1 0 1 1 1 0 zinc-ribbon domain DUF3624 PF12292.3 AJA91943.1 - 0.22 11.9 1.9 0.24 11.7 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) DUF2039 PF10217.4 AJA91943.1 - 0.23 11.4 4.5 0.22 11.5 2.6 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) Ribosomal_S27e PF01667.12 AJA91943.1 - 0.84 9.2 3.6 0.47 10.0 0.2 1.9 1 1 1 2 2 2 0 Ribosomal protein S27 BPL_LplA_LipB PF03099.14 AJA91944.1 - 3e-23 82.2 0.4 3.3e-22 78.8 0.0 2.2 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.7 AJA91944.1 - 1e-15 57.1 0.1 3.5e-15 55.3 0.1 2.0 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.12 AJA91944.1 - 7.9e-13 47.8 1.4 1.5e-12 46.9 1.0 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_24 PF13412.1 AJA91944.1 - 0.0055 16.0 0.0 0.012 15.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding UPF0122 PF04297.9 AJA91944.1 - 0.025 14.6 0.8 0.051 13.6 0.1 1.9 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like DUF1521 PF07481.6 AJA91944.1 - 0.15 11.7 3.1 0.14 11.8 0.8 1.8 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1521) Syntaxin-6_N PF09177.6 AJA91945.1 - 0.028 14.8 0.4 0.048 14.0 0.3 1.6 1 0 0 1 1 1 0 Syntaxin 6, N-terminal KxDL PF10241.4 AJA91945.1 - 0.065 13.1 0.3 0.17 11.7 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein DUF2092 PF09865.4 AJA91945.1 - 0.07 12.1 0.0 0.078 12.0 0.0 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2092) Vert_IL3-reg_TF PF06529.6 AJA91945.1 - 0.087 11.7 0.7 0.1 11.5 0.5 1.0 1 0 0 1 1 1 0 Vertebrate interleukin-3 regulated transcription factor Pterin_4a PF01329.14 AJA91945.1 - 0.37 10.5 2.4 0.49 10.1 0.1 2.1 1 1 1 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase HTH_45 PF14947.1 AJA91946.1 - 1.9e-11 43.5 0.5 2.3e-11 43.3 0.4 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.1 AJA91946.1 - 0.001 18.4 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Ftsk_gamma PF09397.5 AJA91946.1 - 0.0026 17.4 0.1 0.0042 16.7 0.0 1.4 1 0 0 1 1 1 1 Ftsk gamma domain Xol-1_GHMP-like PF09109.5 AJA91946.1 - 0.044 13.8 0.1 0.049 13.7 0.1 1.0 1 0 0 1 1 1 0 Switch protein XOL-1, GHMP-like Baculo_LEF5 PF04838.7 AJA91946.1 - 0.06 13.0 0.0 0.072 12.8 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 HSP33 PF01430.14 AJA91946.1 - 0.062 12.4 0.0 0.067 12.3 0.0 1.1 1 0 0 1 1 1 0 Hsp33 protein DUF976 PF06162.7 AJA91946.1 - 0.12 11.8 1.0 0.8 9.1 0.2 1.9 1 1 1 2 2 2 0 Caenorhabditis elegans protein of unknown function (DUF976) TFIIB PF00382.14 AJA91947.1 - 1e-31 108.5 7.1 1.2e-16 60.2 0.4 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 AJA91947.1 - 6.2e-11 41.4 1.0 1e-10 40.7 0.7 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_11 PF08279.7 AJA91947.1 - 0.0035 16.9 0.2 0.096 12.3 0.0 2.5 2 0 0 2 2 2 1 HTH domain Cyclin_N PF00134.18 AJA91947.1 - 0.007 15.9 0.2 0.026 14.1 0.0 1.9 2 0 0 2 2 2 1 Cyclin, N-terminal domain Sigma70_r4 PF04545.11 AJA91947.1 - 0.0077 15.5 0.0 0.022 14.0 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.7 AJA91947.1 - 0.017 14.5 0.3 0.24 10.8 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_AsnC-type PF13404.1 AJA91947.1 - 0.037 13.5 0.0 0.22 11.0 0.0 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Baculo_ME53 PF06061.6 AJA91947.1 - 0.038 12.9 0.1 0.055 12.4 0.1 1.2 1 0 0 1 1 1 0 Baculoviridae ME53 HTH_23 PF13384.1 AJA91947.1 - 0.047 13.3 1.3 0.17 11.5 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain DUF2387 PF09526.5 AJA91947.1 - 0.11 12.4 0.5 1 9.3 0.2 2.4 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) DZR PF12773.2 AJA91947.1 - 0.17 11.7 1.1 0.38 10.5 0.7 1.5 1 0 0 1 1 1 0 Double zinc ribbon Rep_fac-A_C PF08646.5 AJA91947.1 - 0.18 11.5 4.5 0.5 10.0 0.7 2.7 3 1 0 3 3 2 0 Replication factor-A C terminal domain zinc_ribbon_2 PF13240.1 AJA91947.1 - 0.19 11.2 0.3 0.19 11.2 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA91947.1 - 0.56 9.4 4.5 2 7.7 3.1 1.9 1 1 0 1 1 1 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 AJA91947.1 - 0.7 9.5 2.9 1.8 8.2 0.7 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Mrr_cat PF04471.7 AJA91949.1 - 1.3e-05 24.9 0.0 2.1e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease Hjc PF01870.13 AJA91949.1 - 0.0072 15.9 0.1 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) NERD PF08378.6 AJA91949.1 - 0.014 15.6 0.1 0.022 15.0 0.1 1.3 1 0 0 1 1 1 0 Nuclease-related domain ATP_bind_3 PF01171.15 AJA91950.1 - 3.4e-22 78.8 0.0 5.6e-22 78.1 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 AJA91950.1 - 3.2e-06 25.9 0.0 4.9e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.12 AJA91950.1 - 9.1e-06 24.7 0.0 1.5e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 NAD synthase PAPS_reduct PF01507.14 AJA91950.1 - 7.8e-05 22.5 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DUF2392 PF10288.4 AJA91950.1 - 0.007 16.6 0.0 0.017 15.4 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2392) QueC PF06508.8 AJA91950.1 - 0.0095 15.2 0.1 0.031 13.5 0.1 2.0 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC TF_Zn_Ribbon PF08271.7 AJA91950.1 - 5.7 6.3 13.9 6.3 6.1 1.3 3.6 3 0 0 3 3 3 0 TFIIB zinc-binding Glycos_transf_2 PF00535.21 AJA91951.1 - 3.3e-23 82.1 0.6 4.8e-23 81.6 0.4 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 AJA91951.1 - 0.011 15.5 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Thymidylate_kin PF02223.12 AJA91951.1 - 0.099 12.0 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase Glyco_tranf_2_4 PF13704.1 AJA91951.1 - 0.12 12.7 0.1 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF4491 PF14898.1 AJA91951.1 - 0.67 10.1 6.7 1.6 8.8 4.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) HEAT_2 PF13646.1 AJA91952.1 - 7.5e-16 58.1 0.6 1.5e-07 31.6 0.1 2.8 1 1 2 3 3 3 3 HEAT repeats HEAT_EZ PF13513.1 AJA91952.1 - 1.5e-07 31.7 0.0 0.41 11.2 0.0 4.2 3 1 1 4 4 4 3 HEAT-like repeat HEAT PF02985.17 AJA91952.1 - 7.7e-06 25.5 0.0 0.88 9.8 0.0 4.4 5 0 0 5 5 5 2 HEAT repeat DUF1175 PF06672.6 AJA91952.1 - 0.046 13.0 0.0 0.085 12.1 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1175) Vac14_Fab1_bd PF12755.2 AJA91952.1 - 0.081 13.3 0.2 2 8.8 0.0 2.9 1 1 3 4 4 4 0 Vacuolar 14 Fab1-binding region DUF2229 PF09989.4 AJA91952.1 - 0.29 10.5 2.8 9.7 5.5 0.1 2.1 2 0 0 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF4259 PF14078.1 AJA91952.1 - 1.4 9.3 4.0 7.4 7.0 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4259) DUF1059 PF06348.6 AJA91953.1 - 7.7e-19 67.2 0.9 8.1e-19 67.1 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Viral_DNA_bi PF02236.12 AJA91953.1 - 0.073 13.2 0.1 0.085 13.0 0.1 1.1 1 0 0 1 1 1 0 Viral DNA-binding protein, all alpha domain PUL PF08324.6 AJA91953.1 - 0.11 11.2 0.3 0.12 11.1 0.2 1.0 1 0 0 1 1 1 0 PUL domain S1FA PF04689.8 AJA91954.1 - 0.097 12.5 0.3 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 DNA binding protein S1FA RNA_pol_Rpb5_C PF01191.14 AJA91955.1 - 2.6e-27 94.1 0.0 3e-27 94.0 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain zf-C2H2 PF00096.21 AJA91956.1 - 0.00034 20.7 0.3 0.00034 20.7 0.2 1.9 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 AJA91956.1 - 0.00038 20.6 0.1 0.00038 20.6 0.1 1.7 2 0 0 2 2 2 1 C2H2-type zinc finger zf-BED PF02892.10 AJA91956.1 - 0.001 18.7 0.3 0.0015 18.2 0.2 1.3 1 0 0 1 1 1 1 BED zinc finger zf-C2HC_2 PF13913.1 AJA91956.1 - 0.0065 16.1 3.0 0.015 14.9 0.0 2.1 2 0 0 2 2 2 1 zinc-finger of a C2HC-type zf-C2H2_2 PF12756.2 AJA91956.1 - 0.018 15.1 0.1 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.1 AJA91956.1 - 0.028 14.3 0.1 0.028 14.3 0.0 1.6 2 0 0 2 2 2 0 C2H2-type zinc finger zf-Di19 PF05605.7 AJA91956.1 - 0.051 13.7 0.2 0.07 13.2 0.1 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_3 PF13878.1 AJA91956.1 - 0.055 13.0 0.9 0.066 12.7 0.0 1.6 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF2688 PF10892.3 AJA91956.1 - 0.056 13.1 0.3 0.069 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) Tox-HDC PF15656.1 AJA91956.1 - 0.11 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature zf-H2C2_2 PF13465.1 AJA91956.1 - 0.23 11.8 1.5 1.7 9.0 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger double domain THF_DHG_CYH_C PF02882.14 AJA91957.1 - 2e-58 196.0 1.7 3e-58 195.4 1.2 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 AJA91957.1 - 4.9e-41 139.4 1.0 8.6e-41 138.6 0.7 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IF2_N PF04760.10 AJA91957.1 - 0.0013 18.3 0.4 0.02 14.5 0.1 2.8 3 0 0 3 3 3 1 Translation initiation factor IF-2, N-terminal region Shikimate_DH PF01488.15 AJA91957.1 - 0.019 15.0 0.1 0.045 13.8 0.0 1.7 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Semialdhyde_dh PF01118.19 AJA91957.1 - 0.021 15.1 0.0 0.043 14.1 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain GTP_EFTU PF00009.22 AJA91958.1 - 6.5e-39 133.3 0.0 1e-38 132.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 AJA91958.1 - 8.2e-24 83.4 1.2 2.5e-23 81.9 0.0 2.4 3 0 0 3 3 3 1 Initiation factor eIF2 gamma, C terminal MMR_HSR1 PF01926.18 AJA91958.1 - 0.00043 20.2 0.0 0.00095 19.1 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.20 AJA91958.1 - 0.0012 18.8 0.6 0.0044 17.1 0.2 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 FeoB_N PF02421.13 AJA91958.1 - 0.041 13.1 0.7 3.9 6.7 0.0 2.4 2 1 0 2 2 2 0 Ferrous iron transport protein B Dynamin_N PF00350.18 AJA91958.1 - 0.043 13.6 0.0 2.7 7.7 0.0 2.5 1 1 1 2 2 2 0 Dynamin family PhnA_Zn_Ribbon PF08274.7 AJA91958.1 - 0.072 12.8 1.3 0.83 9.4 0.0 2.3 1 1 1 2 2 2 0 PhnA Zinc-Ribbon NOB1_Zn_bind PF08772.6 AJA91958.1 - 0.089 12.6 0.1 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like CpXC PF14353.1 AJA91958.1 - 0.12 12.3 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 CpXC protein Zn-ribbon_8 PF09723.5 AJA91958.1 - 0.22 11.5 3.1 20 5.2 3.4 2.3 1 1 1 2 2 2 0 Zinc ribbon domain COX1 PF00115.15 AJA91959.1 - 2.9e-138 461.2 61.5 3.7e-138 460.8 42.6 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I P-II PF00543.17 AJA91961.1 - 5.6e-05 23.5 0.1 8.7e-05 22.9 0.1 1.3 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.3 AJA91961.1 - 0.007 16.2 0.0 0.025 14.5 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3240) adh_short PF00106.20 AJA91962.1 - 9.4e-23 80.9 0.0 7.8e-20 71.4 0.0 3.2 3 1 1 4 4 4 2 short chain dehydrogenase adh_short_C2 PF13561.1 AJA91962.1 - 6.3e-19 68.6 0.6 2e-12 47.4 0.0 3.2 2 1 0 3 3 3 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 AJA91962.1 - 4.7e-11 42.6 0.0 3.9e-09 36.4 0.0 2.7 2 1 0 2 2 2 1 KR domain Epimerase PF01370.16 AJA91962.1 - 0.00084 18.8 0.0 0.009 15.4 0.0 2.3 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 AJA91962.1 - 0.0017 17.3 0.2 0.0036 16.2 0.1 1.5 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Pyr_redox PF00070.22 AJA91962.1 - 0.0041 17.4 0.5 0.059 13.7 0.1 2.9 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.1 AJA91962.1 - 0.0066 16.4 0.3 0.062 13.3 0.1 2.7 2 1 0 2 2 2 1 NADH(P)-binding 3HCDH_N PF02737.13 AJA91962.1 - 0.018 14.7 2.5 0.021 14.4 0.1 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Baculo_p47 PF05112.7 AJA91962.1 - 0.16 11.3 0.7 0.8 9.0 0.0 2.1 1 1 1 2 2 2 0 Baculovirus P47 protein RNA_binding PF01877.12 AJA91963.1 - 4.4e-23 81.5 2.4 5.4e-23 81.2 1.7 1.1 1 0 0 1 1 1 1 RNA binding Glyco_transf_7C PF02709.9 AJA91963.1 - 0.12 11.8 0.0 0.29 10.6 0.0 1.6 2 0 0 2 2 2 0 N-terminal domain of galactosyltransferase DUF3040 PF11239.3 AJA91963.1 - 0.16 12.0 0.1 0.26 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) HisK_N PF09385.5 AJA91963.1 - 0.94 9.0 5.3 3.1 7.4 1.7 2.0 1 1 1 2 2 2 0 Histidine kinase N terminal Beta-Casp PF10996.3 AJA91964.1 - 1.6e-19 70.0 0.0 3.1e-19 69.1 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 AJA91964.1 - 5e-15 55.6 0.0 1.6e-14 53.9 0.0 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 AJA91964.1 - 1.3e-13 50.9 0.0 2.5e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.7 AJA91964.1 - 2.3e-12 46.5 0.1 1.1e-11 44.3 0.0 2.2 2 0 0 2 2 2 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 AJA91964.1 - 3.2e-05 23.7 0.0 0.00051 19.7 0.0 2.4 2 1 0 2 2 2 1 Beta-lactamase superfamily domain tRNA-synt_1e PF01406.14 AJA91965.1 - 8e-121 402.7 0.5 1.4e-120 402.0 0.3 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.6 AJA91965.1 - 2.5e-12 46.8 0.4 8.4e-12 45.1 0.2 2.0 1 1 0 1 1 1 1 DALR domain tRNA-synt_1g PF09334.6 AJA91965.1 - 5.4e-12 45.0 0.5 2.1e-05 23.3 0.2 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 AJA91965.1 - 2.5e-08 32.4 0.6 6.7e-06 24.3 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.13 AJA91965.1 - 3e-07 29.4 0.4 0.0038 15.9 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) UVR PF02151.14 AJA91965.1 - 0.0023 17.3 0.5 0.014 14.8 0.4 2.3 1 0 0 1 1 1 1 UvrB/uvrC motif tRNA-synt_1d PF00750.14 AJA91965.1 - 0.042 12.6 3.2 0.076 11.8 0.0 2.8 4 1 0 4 4 4 0 tRNA synthetases class I (R) DNA_pol3_a_NII PF11490.3 AJA91965.1 - 0.17 11.4 6.1 0.8 9.3 0.1 2.7 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus II AAA PF00004.24 AJA91966.1 - 1.8e-90 299.9 0.0 1.9e-48 163.9 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 AJA91966.1 - 3.7e-25 87.6 1.9 8.1e-25 86.6 0.4 2.3 3 0 0 3 3 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.7 AJA91966.1 - 4.8e-15 55.2 0.0 1.4e-08 34.0 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_2 PF07724.9 AJA91966.1 - 4.9e-13 49.3 0.0 2.3e-08 34.1 0.0 2.6 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 AJA91966.1 - 1.2e-12 48.1 0.2 0.00066 19.8 0.0 4.4 2 2 2 4 4 4 2 AAA domain AAA_14 PF13173.1 AJA91966.1 - 2.8e-12 46.6 0.0 1.4e-06 28.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 AJA91966.1 - 3.6e-12 46.6 0.0 0.00011 22.1 0.0 3.7 3 1 1 4 4 3 2 AAA ATPase domain AAA_17 PF13207.1 AJA91966.1 - 4.5e-12 46.8 0.0 9.1e-06 26.4 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 AJA91966.1 - 1.3e-11 44.5 0.0 8.8e-05 22.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain Arch_ATPase PF01637.13 AJA91966.1 - 1.2e-10 41.4 0.1 0.00032 20.4 0.0 3.9 2 1 1 3 3 3 3 Archaeal ATPase AAA_5 PF07728.9 AJA91966.1 - 1.5e-10 40.9 0.4 0.00014 21.6 0.0 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_25 PF13481.1 AJA91966.1 - 1.2e-09 37.8 1.2 0.076 12.4 0.0 4.6 3 1 0 4 4 4 3 AAA domain RNA_helicase PF00910.17 AJA91966.1 - 3.7e-09 36.7 0.0 0.0014 18.7 0.0 2.6 2 0 0 2 2 2 2 RNA helicase CDC48_2 PF02933.12 AJA91966.1 - 1.9e-08 33.8 0.3 7e-08 31.9 0.1 2.0 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_18 PF13238.1 AJA91966.1 - 5.1e-08 33.2 0.1 0.0042 17.3 0.0 2.9 3 0 0 3 3 2 2 AAA domain ABC_tran PF00005.22 AJA91966.1 - 6e-08 33.0 0.3 0.0039 17.4 0.0 2.8 3 0 0 3 3 2 2 ABC transporter AAA_28 PF13521.1 AJA91966.1 - 7.3e-08 32.5 0.0 0.011 15.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 AJA91966.1 - 1.1e-07 31.5 0.0 0.016 14.6 0.0 2.7 3 0 0 3 3 2 2 IstB-like ATP binding protein Sigma54_activ_2 PF14532.1 AJA91966.1 - 2.7e-07 30.6 0.0 0.03 14.3 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.7 AJA91966.1 - 2.9e-07 29.7 0.0 0.018 14.1 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin Mg_chelatase PF01078.16 AJA91966.1 - 4.2e-07 29.3 0.4 0.014 14.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI NACHT PF05729.7 AJA91966.1 - 8.8e-07 28.7 0.2 0.19 11.3 0.0 3.7 4 0 0 4 4 4 2 NACHT domain AAA_24 PF13479.1 AJA91966.1 - 7e-06 25.7 0.4 0.11 12.0 0.0 2.9 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.8 AJA91966.1 - 1.2e-05 24.2 0.0 0.051 12.2 0.0 3.0 3 0 0 3 3 3 2 TIP49 C-terminus KaiC PF06745.8 AJA91966.1 - 1.4e-05 24.3 0.5 0.28 10.2 0.0 3.6 2 2 2 4 4 4 2 KaiC AAA_19 PF13245.1 AJA91966.1 - 3.7e-05 23.3 1.1 0.11 12.3 0.0 2.6 2 0 0 2 2 2 2 Part of AAA domain Viral_helicase1 PF01443.13 AJA91966.1 - 6.4e-05 22.5 0.0 0.086 12.3 0.0 2.8 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase Rad17 PF03215.10 AJA91966.1 - 8.1e-05 21.4 0.0 0.14 10.7 0.0 2.7 2 1 1 3 3 3 2 Rad17 cell cycle checkpoint protein KAP_NTPase PF07693.9 AJA91966.1 - 0.00065 18.7 0.1 3 6.7 0.0 3.3 2 2 1 3 3 3 1 KAP family P-loop domain PhoH PF02562.11 AJA91966.1 - 0.00079 18.7 0.8 1.7 7.7 0.0 3.5 4 0 0 4 4 3 2 PhoH-like protein DUF815 PF05673.8 AJA91966.1 - 0.00081 18.3 0.0 0.45 9.3 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) UPF0079 PF02367.12 AJA91966.1 - 0.0012 18.4 0.2 1.9 8.1 0.0 2.8 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 Sigma54_activat PF00158.21 AJA91966.1 - 0.0013 18.2 0.0 1.5 8.2 0.0 3.2 2 1 0 2 2 2 1 Sigma-54 interaction domain ATP-synt_ab PF00006.20 AJA91966.1 - 0.0014 18.1 0.0 1.5 8.2 0.0 2.9 2 1 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Parvo_NS1 PF01057.12 AJA91966.1 - 0.0021 16.9 0.0 1.5 7.6 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Bac_DnaA PF00308.13 AJA91966.1 - 0.0021 17.7 0.0 0.27 10.8 0.0 2.5 2 1 0 2 2 2 1 Bacterial dnaA protein SRPRB PF09439.5 AJA91966.1 - 0.0024 17.1 0.0 1.7 7.8 0.0 3.2 3 0 0 3 3 3 1 Signal recognition particle receptor beta subunit AAA_3 PF07726.6 AJA91966.1 - 0.0033 17.0 0.0 2.1 7.9 0.0 3.2 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.1 AJA91966.1 - 0.0044 17.0 1.9 7.2 6.4 0.0 4.0 3 2 0 3 3 3 0 AAA domain NB-ARC PF00931.17 AJA91966.1 - 0.0081 15.0 0.1 3.7 6.3 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain SKI PF01202.17 AJA91966.1 - 0.011 15.5 0.1 4.8 7.0 0.0 2.8 3 0 0 3 3 2 0 Shikimate kinase AAA_10 PF12846.2 AJA91966.1 - 0.016 14.6 0.2 15 4.9 0.0 3.5 2 2 2 4 4 4 0 AAA-like domain DUF2075 PF09848.4 AJA91966.1 - 0.023 13.6 0.0 1.7 7.5 0.0 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) PduV-EutP PF10662.4 AJA91966.1 - 0.041 13.3 0.0 7.7 5.9 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DAP3 PF10236.4 AJA91966.1 - 0.053 12.4 0.0 8.5 5.2 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_11 PF13086.1 AJA91966.1 - 0.054 13.0 0.0 6.1 6.3 0.0 2.5 2 1 0 2 2 2 0 AAA domain ResIII PF04851.10 AJA91966.1 - 0.088 12.6 0.0 4.9 6.9 0.0 2.6 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Prok-RING_4 PF14447.1 AJA91967.1 - 0.1 12.1 0.6 0.14 11.6 0.4 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.9 AJA91967.1 - 0.2 11.1 0.8 0.42 10.1 0.1 1.8 2 0 0 2 2 2 0 Rad50 zinc hook motif tRNA-synt_His PF13393.1 AJA91968.1 - 6.1e-46 156.9 0.0 7.6e-46 156.5 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 AJA91968.1 - 3.4e-20 72.3 0.1 6.1e-20 71.4 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 AJA91968.1 - 5.6e-11 42.2 0.4 1.3e-10 41.1 0.3 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2d PF01409.15 AJA91968.1 - 8.6e-05 21.8 0.0 0.00014 21.1 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) TPR_11 PF13414.1 AJA91969.1 - 3.3e-09 36.2 5.3 3.5e-05 23.3 0.5 2.3 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.12 AJA91969.1 - 1.3e-06 27.8 0.5 6.9e-06 25.5 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.23 AJA91969.1 - 2.2e-06 27.0 3.4 9.8e-06 24.9 0.4 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.1 AJA91969.1 - 2.3e-06 26.9 1.1 6.9e-06 25.4 0.8 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat Reprolysin_2 PF13574.1 AJA91969.1 - 3e-06 27.4 0.1 9.2e-06 25.8 0.0 1.8 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like TPR_12 PF13424.1 AJA91969.1 - 2.2e-05 24.2 0.0 4e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Peptidase_M54 PF07998.6 AJA91969.1 - 7.3e-05 22.6 0.0 0.00015 21.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M54 Reprolysin_4 PF13583.1 AJA91969.1 - 0.00073 19.1 0.0 0.0014 18.2 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.1 AJA91969.1 - 0.00081 19.3 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.1 AJA91969.1 - 0.0011 19.4 0.0 0.0027 18.2 0.0 1.7 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.4 AJA91969.1 - 0.0016 17.3 0.0 0.0031 16.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase M66 DUF3744 PF12558.3 AJA91969.1 - 0.008 16.5 0.2 0.02 15.2 0.1 1.7 1 0 0 1 1 1 1 ATP-binding cassette cobalt transporter Peptidase_M10 PF00413.19 AJA91969.1 - 0.015 15.0 0.2 0.039 13.6 0.1 1.8 1 1 0 1 1 1 0 Matrixin Metallopep PF12044.3 AJA91969.1 - 0.025 13.0 0.1 0.12 10.7 0.0 1.9 2 0 0 2 2 2 0 Putative peptidase family TPR_16 PF13432.1 AJA91969.1 - 0.04 14.6 0.0 0.066 13.8 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1025 PF06262.6 AJA91969.1 - 0.049 13.4 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 Possibl zinc metallo-peptidase TPR_10 PF13374.1 AJA91969.1 - 0.065 13.1 0.1 0.69 9.9 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.1 AJA91969.1 - 0.067 13.6 0.1 0.2 12.1 0.0 1.8 2 0 0 2 2 1 0 Tetratricopeptide repeat TPR_19 PF14559.1 AJA91969.1 - 0.1 12.9 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat OTCace_N PF02729.16 AJA91970.1 - 1.1e-52 177.4 0.0 1.7e-52 176.8 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 AJA91970.1 - 2e-48 164.2 0.2 3.9e-48 163.3 0.1 1.5 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TctA PF01970.11 AJA91971.1 - 0.042 12.2 2.0 0.055 11.8 1.4 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family MMR_HSR1 PF01926.18 AJA91972.1 - 7.7e-16 58.0 1.8 1.1e-15 57.6 0.2 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP-bdg_N PF13167.1 AJA91972.1 - 1.4e-09 37.9 1.4 1.4e-09 37.9 1.0 2.2 3 0 0 3 3 2 1 GTP-binding GTPase N-terminal FeoB_N PF02421.13 AJA91972.1 - 2.8e-05 23.4 0.9 2.8e-05 23.4 0.6 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B PduV-EutP PF10662.4 AJA91972.1 - 0.00066 19.1 2.4 0.01 15.3 1.7 2.5 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation DUF258 PF03193.11 AJA91972.1 - 0.00099 18.3 0.1 0.0026 16.9 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function, DUF258 Arf PF00025.16 AJA91972.1 - 0.0015 17.7 3.2 0.0047 16.1 2.2 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.22 AJA91972.1 - 0.0026 17.2 6.5 0.016 14.6 2.2 2.6 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.5 AJA91972.1 - 0.0029 16.8 1.3 0.0065 15.7 0.9 1.6 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit ABC_tran PF00005.22 AJA91972.1 - 0.003 17.8 0.8 0.011 16.0 0.1 2.1 2 1 0 2 2 2 1 ABC transporter AAA PF00004.24 AJA91972.1 - 0.0036 17.5 2.3 0.045 13.9 0.1 2.5 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Miro PF08477.8 AJA91972.1 - 0.011 16.1 0.6 0.027 14.9 0.1 1.9 2 0 0 2 2 2 0 Miro-like protein Dynamin_N PF00350.18 AJA91972.1 - 0.041 13.7 1.4 0.086 12.6 0.2 2.1 2 1 0 2 2 2 0 Dynamin family T2SE PF00437.15 AJA91972.1 - 0.15 10.9 0.7 0.26 10.1 0.3 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein LKAAEAR PF15478.1 AJA91972.1 - 0.27 11.4 2.5 0.45 10.7 1.0 1.8 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif cobW PF02492.14 AJA91972.1 - 1.5 8.2 4.5 2.7 7.4 0.2 2.8 2 2 1 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_14 PF13173.1 AJA91972.1 - 2.1 8.2 10.7 48 3.8 0.2 3.3 2 1 0 2 2 2 0 AAA domain TPR_11 PF13414.1 AJA91973.1 - 1.8e-18 65.9 2.3 7e-11 41.6 0.3 2.3 2 0 0 2 2 2 2 TPR repeat TPR_1 PF00515.23 AJA91973.1 - 2.5e-16 58.5 10.7 3.3e-06 26.4 0.3 4.7 4 1 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.12 AJA91973.1 - 2.7e-12 45.5 6.3 0.00043 19.9 0.2 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.1 AJA91973.1 - 2.9e-12 45.7 7.7 0.00026 20.9 0.1 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.1 AJA91973.1 - 5.5e-10 39.0 4.1 1.9e-06 27.7 0.1 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.1 AJA91973.1 - 2.8e-06 27.8 0.0 0.003 18.2 0.0 2.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 AJA91973.1 - 5.2e-06 25.8 12.5 0.014 15.1 0.4 4.7 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_9 PF13371.1 AJA91973.1 - 2.5e-05 24.0 0.0 9e-05 22.2 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.1 AJA91973.1 - 0.00035 20.9 0.0 3.4 8.5 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.1 AJA91973.1 - 0.0011 18.6 0.7 0.11 12.3 0.0 3.5 2 2 1 3 3 3 1 Tetratricopeptide repeat Peptidase_C39_2 PF13529.1 AJA91973.1 - 0.0072 16.6 0.3 0.058 13.7 0.0 2.4 2 1 0 2 2 2 1 Peptidase_C39 like family TPR_6 PF13174.1 AJA91973.1 - 0.026 14.9 1.5 20 5.9 0.1 3.6 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_19 PF14559.1 AJA91973.1 - 0.034 14.4 2.1 5.7 7.3 0.0 3.0 2 1 1 3 3 2 0 Tetratricopeptide repeat Fer4_12 PF13353.1 AJA91973.1 - 0.09 12.8 0.9 0.16 12.0 0.6 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain Glyco_hyd_65N_2 PF14498.1 AJA91973.1 - 0.14 11.8 0.2 0.19 11.3 0.2 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain Beta-Casp PF10996.3 AJA91974.1 - 2.8e-31 108.0 0.0 5.2e-31 107.1 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 AJA91974.1 - 6.1e-22 78.2 0.1 1.1e-21 77.3 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 AJA91974.1 - 3.8e-13 49.4 0.0 2.8e-12 46.5 0.0 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain RMMBL PF07521.7 AJA91974.1 - 1.1e-12 47.5 0.0 3.9e-12 45.7 0.0 2.0 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 AJA91974.1 - 0.0053 16.4 0.0 0.022 14.4 0.0 2.1 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Aminotran_3 PF00202.16 AJA91975.1 - 4.7e-70 236.0 0.0 7.1e-70 235.5 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 AJA91975.1 - 7.8e-07 28.3 0.0 1e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II DUF2672 PF10878.3 AJA91975.1 - 0.034 13.8 0.1 0.034 13.8 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2672) z-alpha PF02295.12 AJA91975.1 - 0.21 11.3 1.8 1.1 9.0 0.1 2.8 3 0 0 3 3 3 0 Adenosine deaminase z-alpha domain DUF86 PF01934.12 AJA91976.1 - 0.016 14.8 0.3 0.023 14.3 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF86 ENTH PF01417.15 AJA91976.1 - 0.033 14.0 0.7 0.11 12.3 0.5 1.8 1 1 0 1 1 1 0 ENTH domain zf-ribbon_3 PF13248.1 AJA91977.1 - 0.002 17.3 1.4 0.31 10.3 0.2 2.4 2 0 0 2 2 2 2 zinc-ribbon domain IZUMO PF15005.1 AJA91977.1 - 8.7 6.3 10.2 9.2 6.2 7.1 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion DUF1344 PF07076.6 AJA91978.1 - 0.087 12.4 0.1 1.6 8.3 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1344) DUF3997 PF13162.1 AJA91980.1 - 0.0016 18.2 0.1 0.0023 17.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3997) DNA_pol3_delta PF06144.8 AJA91980.1 - 0.012 15.0 0.1 0.15 11.5 0.0 2.0 2 0 0 2 2 2 0 DNA polymerase III, delta subunit DUF108 PF01958.13 AJA91982.1 - 3e-33 113.8 0.1 5.8e-33 112.9 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 AJA91982.1 - 8.6e-16 58.3 0.0 1.6e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.15 AJA91982.1 - 3.5e-05 23.7 0.0 7.5e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_Gly3P_dh_N PF01210.18 AJA91982.1 - 0.01 15.5 0.3 0.17 11.6 0.2 2.2 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFO_IDH_MocA PF01408.17 AJA91982.1 - 0.012 16.0 0.1 0.043 14.3 0.0 1.9 2 1 1 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.19 AJA91982.1 - 0.014 15.6 0.2 0.021 15.1 0.1 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 AJA91982.1 - 0.065 13.6 0.1 0.15 12.5 0.1 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 AJA91982.1 - 0.095 11.8 0.0 0.15 11.1 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PIG-L PF02585.12 AJA91983.1 - 9.8e-33 113.3 0.0 1.3e-32 113.0 0.0 1.1 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Glyco_trans_4_2 PF13477.1 AJA91983.1 - 0.017 14.9 1.8 0.66 9.7 0.1 2.3 1 1 1 2 2 2 0 Glycosyl transferase 4-like Spore_III_AB PF09548.5 AJA91983.1 - 0.019 14.7 0.3 18 4.9 0.0 3.1 3 0 0 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) QueC PF06508.8 AJA91983.1 - 0.023 13.9 0.1 0.064 12.5 0.0 1.8 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC Methyltransf_11 PF08241.7 AJA91983.1 - 0.11 13.0 0.1 0.34 11.4 0.0 1.9 1 1 1 2 2 2 0 Methyltransferase domain ABC_tran_2 PF12848.2 AJA91983.1 - 0.23 11.3 2.8 0.24 11.2 0.9 1.7 2 0 0 2 2 2 0 ABC transporter TrmB PF01978.14 AJA91985.1 - 5e-05 22.9 0.1 0.00012 21.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 AJA91985.1 - 0.0019 17.8 0.1 0.0037 16.9 0.1 1.5 1 1 0 1 1 1 1 MarR family HTH_27 PF13463.1 AJA91985.1 - 0.0048 17.2 0.1 0.0078 16.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 AJA91985.1 - 0.022 14.1 0.1 0.041 13.2 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 AJA91985.1 - 0.024 14.4 0.0 0.045 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 AJA91985.1 - 0.029 14.1 0.0 0.093 12.5 0.0 1.8 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain DUF2250 PF10007.4 AJA91985.1 - 0.048 13.5 0.1 0.25 11.2 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Crp PF00325.15 AJA91985.1 - 0.062 12.7 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_12 PF08461.5 AJA91985.1 - 0.074 12.7 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain DUF3287 PF11690.3 AJA91985.1 - 0.11 12.5 1.0 0.22 11.5 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) Endonuc-dimeris PF09124.5 AJA91986.1 - 0.071 12.7 0.1 0.11 12.1 0.0 1.4 1 1 0 1 1 1 0 T4 recombination endonuclease VII, dimerisation DUF3510 PF12022.3 AJA91986.1 - 0.073 13.1 0.1 0.078 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) A2M_N PF01835.14 AJA91987.1 - 4.2e-24 84.6 0.4 5.4e-07 29.7 0.0 6.1 5 1 0 6 6 6 3 MG2 domain FlgD_ig PF13860.1 AJA91987.1 - 0.00015 21.4 13.1 0.024 14.3 0.1 6.4 7 0 0 7 7 7 2 FlgD Ig-like domain Wzt_C PF14524.1 AJA91987.1 - 0.12 12.0 4.1 23 4.6 0.0 4.7 5 2 0 5 5 5 0 Wzt C-terminal domain ABC_tran PF00005.22 AJA91988.1 - 6.2e-35 120.4 0.1 1e-34 119.7 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 AJA91988.1 - 1.5e-07 31.6 2.1 1.1e-05 25.5 1.5 2.3 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 AJA91988.1 - 3.9e-06 26.1 8.7 0.0055 15.8 0.2 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 AJA91988.1 - 1.1e-05 25.6 0.7 5.9e-05 23.3 0.4 2.1 1 1 1 2 2 2 1 AAA domain AAA_10 PF12846.2 AJA91988.1 - 2.9e-05 23.6 0.0 0.00025 20.5 0.0 1.9 1 1 1 2 2 2 1 AAA-like domain AAA_13 PF13166.1 AJA91988.1 - 3.9e-05 22.3 0.4 0.057 11.8 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.1 AJA91988.1 - 4e-05 23.7 1.4 0.00025 21.2 1.0 2.0 1 1 0 1 1 1 1 AAA domain oligo_HPY PF08352.7 AJA91988.1 - 4.2e-05 23.7 0.0 0.0001 22.5 0.0 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.14 AJA91988.1 - 6.1e-05 22.3 1.4 0.00012 21.4 1.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 AJA91988.1 - 7.7e-05 21.9 0.0 0.00016 20.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 AJA91988.1 - 0.00021 20.7 0.0 0.00041 19.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.1 AJA91988.1 - 0.00026 21.8 0.3 0.0006 20.6 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 AJA91988.1 - 0.00034 20.6 0.1 0.00056 19.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.7 AJA91988.1 - 0.00039 19.5 0.0 0.00076 18.6 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin T2SE PF00437.15 AJA91988.1 - 0.0012 17.7 0.1 0.0032 16.4 0.0 1.8 1 1 1 2 2 2 1 Type II/IV secretion system protein DUF87 PF01935.12 AJA91988.1 - 0.0017 18.2 1.0 0.004 17.0 0.3 1.9 1 1 0 1 1 1 1 Domain of unknown function DUF87 G-alpha PF00503.15 AJA91988.1 - 0.0057 15.4 1.4 0.0069 15.1 1.0 1.1 1 0 0 1 1 1 1 G-protein alpha subunit AAA_25 PF13481.1 AJA91988.1 - 0.0079 15.6 0.1 0.036 13.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.13 AJA91988.1 - 0.01 15.3 0.0 0.027 13.9 0.0 1.7 1 0 0 1 1 1 1 FtsK/SpoIIIE family NB-ARC PF00931.17 AJA91988.1 - 0.017 13.9 0.0 0.037 12.9 0.0 1.6 1 0 0 1 1 1 0 NB-ARC domain PRK PF00485.13 AJA91988.1 - 0.018 14.6 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.17 AJA91988.1 - 0.021 15.0 0.2 0.13 12.4 0.1 2.4 1 1 0 2 2 2 0 RNA helicase AAA_19 PF13245.1 AJA91988.1 - 0.021 14.5 0.0 0.046 13.4 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain APS_kinase PF01583.15 AJA91988.1 - 0.022 14.4 0.1 0.25 10.9 0.0 2.5 2 1 1 3 3 3 0 Adenylylsulphate kinase DEAD PF00270.24 AJA91988.1 - 0.026 14.0 0.0 0.056 12.9 0.0 1.6 1 1 0 1 1 1 0 DEAD/DEAH box helicase MobB PF03205.9 AJA91988.1 - 0.03 14.0 0.1 0.08 12.6 0.0 1.8 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.1 AJA91988.1 - 0.031 14.6 4.5 0.07 13.4 3.0 1.9 1 1 0 1 1 1 0 AAA domain DUF4125 PF13526.1 AJA91988.1 - 0.036 13.5 0.5 1 8.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4125) UPF0079 PF02367.12 AJA91988.1 - 0.05 13.2 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 Sigma54_activat PF00158.21 AJA91988.1 - 0.057 12.8 0.0 0.18 11.2 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain NACHT PF05729.7 AJA91988.1 - 0.066 12.8 0.0 0.13 11.8 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.1 AJA91988.1 - 0.09 12.6 0.2 0.35 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 AJA91988.1 - 0.096 12.4 0.0 0.28 10.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.20 AJA91988.1 - 0.11 12.0 0.0 0.21 11.0 0.0 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.24 AJA91988.1 - 0.26 11.5 3.6 3 8.0 2.5 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.10 AJA91988.1 - 0.31 10.7 3.3 0.47 10.1 0.1 2.4 2 1 0 2 2 2 0 NTPase Terminase_2 PF03592.11 AJA91988.1 - 0.73 10.1 4.1 0.64 10.3 0.1 2.3 2 1 0 2 2 2 0 Terminase small subunit CbiA PF01656.18 AJA91988.1 - 1.6 8.1 4.5 2.2 7.6 0.1 2.3 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP-synt_D PF01813.12 AJA91989.1 - 2.5e-49 167.5 3.8 2.8e-49 167.3 2.6 1.0 1 0 0 1 1 1 1 ATP synthase subunit D PerC PF06069.6 AJA91989.1 - 0.011 15.7 0.4 0.044 13.8 0.0 2.2 2 1 1 3 3 3 0 PerC transcriptional activator DUF4356 PF14266.1 AJA91989.1 - 0.042 12.2 0.4 0.072 11.4 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4356) DUF489 PF04356.7 AJA91989.1 - 0.073 12.6 0.2 0.18 11.3 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF489) DUF1019 PF06254.6 AJA91989.1 - 0.29 11.3 4.7 0.22 11.7 0.6 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1019) ATP-grasp PF02222.17 AJA91990.1 - 1.9e-61 206.4 0.2 3.4e-61 205.5 0.2 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 AJA91990.1 - 6.6e-17 61.8 0.1 1e-16 61.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 AJA91990.1 - 1.4e-09 37.6 0.7 3e-09 36.5 0.5 1.5 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 AJA91990.1 - 2.1e-08 33.8 1.0 4.1e-08 32.9 0.7 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_Ter PF15632.1 AJA91990.1 - 1.4e-07 30.6 0.1 1.3e-05 24.1 0.0 2.1 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 AJA91990.1 - 2.4e-05 23.7 0.3 5.1e-05 22.6 0.2 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.9 AJA91990.1 - 3.7e-05 23.6 0.6 6.7e-05 22.8 0.4 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 AJA91990.1 - 0.00067 19.2 0.3 0.0014 18.2 0.2 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DUF1297 PF06973.7 AJA91990.1 - 0.0075 15.5 0.0 0.014 14.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) TrkA_N PF02254.13 AJA91990.1 - 0.015 15.3 0.5 0.2 11.6 0.0 2.8 2 2 0 3 3 3 0 TrkA-N domain 2-Hacid_dh_C PF02826.14 AJA91990.1 - 0.059 12.5 0.0 0.15 11.2 0.0 1.7 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.22 AJA91990.1 - 1.6 9.2 4.6 11 6.5 0.0 3.9 3 2 1 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase PEP-utilizers_C PF02896.13 AJA91991.1 - 1.1e-88 296.9 0.2 2.2e-88 295.9 0.2 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.14 AJA91991.1 - 2.5e-58 197.6 0.0 1.3e-57 195.3 0.0 2.0 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.18 AJA91991.1 - 5.1e-20 70.8 0.1 1.9e-19 68.9 0.1 2.1 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEARLI-4 PF05278.7 AJA91991.1 - 0.034 13.5 0.3 0.034 13.5 0.2 2.5 3 0 0 3 3 3 0 Arabidopsis phospholipase-like protein (PEARLI 4) Phage_connect_1 PF05135.8 AJA91991.1 - 0.035 14.2 0.7 0.27 11.4 0.0 2.7 3 0 0 3 3 3 0 Phage gp6-like head-tail connector protein Secretogranin_V PF05281.6 AJA91991.1 - 0.059 12.7 0.8 0.19 11.0 0.0 2.1 3 0 0 3 3 3 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) TGT PF01702.13 AJA91993.1 - 1.1e-42 145.9 0.0 1.6e-42 145.4 0.0 1.2 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Ribosomal_S2 PF00318.15 AJA91994.1 - 3e-33 114.8 0.1 3.4e-17 62.3 0.6 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 RecR PF02132.10 AJA91995.1 - 0.013 14.9 0.3 0.022 14.1 0.2 1.5 1 0 0 1 1 1 0 RecR protein DUF904 PF06005.7 AJA91995.1 - 0.026 14.8 0.3 0.031 14.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF904) TFIIS_C PF01096.13 AJA91996.1 - 3.3e-18 65.0 6.5 3.3e-18 65.0 4.5 2.9 2 1 1 3 3 3 1 Transcription factor S-II (TFIIS) OrfB_Zn_ribbon PF07282.6 AJA91996.1 - 0.00064 19.3 5.7 0.011 15.3 1.2 2.4 2 0 0 2 2 2 1 Putative transposase DNA-binding domain DZR PF12773.2 AJA91996.1 - 0.00096 18.9 8.6 0.0017 18.1 0.7 2.4 2 1 0 2 2 2 1 Double zinc ribbon zinc_ribbon_5 PF13719.1 AJA91996.1 - 0.026 14.0 1.3 0.026 14.0 0.9 3.8 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 AJA91996.1 - 0.029 14.0 1.6 0.029 14.0 1.1 3.8 4 0 0 4 4 4 0 zinc-ribbon domain Ribosomal_L37ae PF01780.14 AJA91996.1 - 0.034 14.0 2.7 0.072 12.9 0.0 2.2 2 1 0 2 2 2 0 Ribosomal L37ae protein family C1_4 PF07975.7 AJA91996.1 - 0.074 13.0 12.7 0.63 10.0 1.8 2.9 2 2 0 2 2 2 0 TFIIH C1-like domain Rubredoxin PF00301.15 AJA91996.1 - 0.1 12.4 4.0 16 5.4 0.0 3.4 3 0 0 3 3 3 0 Rubredoxin zf-DNA_Pol PF08996.5 AJA91996.1 - 0.13 11.5 5.1 0.43 9.9 0.5 2.1 1 1 1 2 2 2 0 DNA Polymerase alpha zinc finger Elf1 PF05129.8 AJA91996.1 - 0.15 11.7 9.1 0.55 9.9 0.5 2.7 2 1 0 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_2 PF13240.1 AJA91996.1 - 0.3 10.6 8.3 0.33 10.5 1.8 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DUF2387 PF09526.5 AJA91996.1 - 0.34 10.8 9.5 0.31 10.9 1.3 2.5 1 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) RNA_POL_M_15KD PF02150.11 AJA91996.1 - 0.38 10.4 9.6 2.1 8.0 4.6 3.1 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-PHD-like PF15446.1 AJA91996.1 - 0.47 9.7 6.3 35 3.6 4.4 2.1 1 1 0 1 1 1 0 PHD/FYVE-zinc-finger like domain DUF2296 PF10058.4 AJA91996.1 - 0.58 9.9 5.3 13 5.6 1.3 2.6 2 1 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) C1_1 PF00130.17 AJA91996.1 - 0.71 9.6 8.9 0.97 9.2 0.7 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) IBR PF01485.16 AJA91996.1 - 1 9.2 13.6 0.26 11.1 1.4 2.7 2 1 0 2 2 2 0 IBR domain zinc-ribbons_6 PF07191.7 AJA91996.1 - 1.1 9.0 7.2 0.2 11.4 0.3 2.5 3 0 0 3 3 2 0 zinc-ribbons zf-C3HC4_4 PF15227.1 AJA91996.1 - 1.4 8.8 11.3 0.17 11.7 1.4 2.8 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-TFIIB PF13453.1 AJA91996.1 - 1.7 7.8 7.0 26 4.1 2.7 3.0 2 1 1 3 3 3 0 Transcription factor zinc-finger Zn_Tnp_IS1595 PF12760.2 AJA91996.1 - 1.8 8.4 12.9 9.6 6.1 1.4 3.1 2 2 0 2 2 2 0 Transposase zinc-ribbon domain Baculo_LEF5_C PF11792.3 AJA91996.1 - 1.9 7.9 8.5 0.1 12.0 0.6 2.6 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain PhnA_Zn_Ribbon PF08274.7 AJA91996.1 - 3 7.6 5.7 9.9 6.0 0.0 3.2 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Rep_fac-A_C PF08646.5 AJA91996.1 - 3.4 7.3 11.0 3.7 7.2 1.7 2.2 1 1 1 2 2 2 0 Replication factor-A C terminal domain zf-RING_3 PF14369.1 AJA91996.1 - 4.6 7.3 7.1 3.8 7.6 2.5 2.6 2 1 0 2 2 2 0 zinc-finger HypA PF01155.14 AJA91996.1 - 6.2 6.5 6.5 2.4 7.8 0.3 2.3 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Tnp_zf-ribbon_2 PF13842.1 AJA91996.1 - 7.6 7.0 11.8 23 5.5 0.2 3.0 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Asn_synthase PF00733.16 AJA91997.1 - 7.3e-27 94.4 0.0 9.4e-27 94.1 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 AJA91997.1 - 7.9e-08 31.4 0.2 1.7e-07 30.3 0.1 1.5 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.15 AJA91997.1 - 0.00012 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 PP-loop family QueC PF06508.8 AJA91997.1 - 0.00064 19.0 0.0 0.001 18.3 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 AJA91997.1 - 0.00078 18.1 0.0 0.0012 17.4 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase Peptidase_M50 PF02163.17 AJA91998.1 - 1.1e-16 60.4 8.8 1.8e-15 56.4 6.1 2.3 1 1 0 1 1 1 1 Peptidase family M50 DUF371 PF04027.8 AJA91999.1 - 1.1e-40 138.3 0.1 1.3e-40 138.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) Sua5_yciO_yrdC PF01300.13 AJA92000.1 - 5.9e-44 149.4 0.0 6.7e-44 149.2 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination DUF4367 PF14285.1 AJA92000.1 - 0.081 12.2 3.9 0.17 11.2 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4367) DUF3875 PF12991.2 AJA92000.1 - 0.1 12.3 0.4 6.3 6.5 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3875) CPSase_L_D2 PF02786.12 AJA92001.1 - 1.3e-69 233.7 0.1 1.9e-69 233.1 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 AJA92001.1 - 1.6e-43 147.2 0.0 2.8e-43 146.4 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 AJA92001.1 - 1.1e-32 112.2 0.0 2.2e-32 111.2 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_4 PF13535.1 AJA92001.1 - 4.6e-19 68.8 0.0 8.2e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 AJA92001.1 - 4.1e-15 55.3 0.0 2.7e-14 52.6 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.17 AJA92001.1 - 8.2e-11 41.5 0.2 2.1e-10 40.2 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain RimK PF08443.6 AJA92001.1 - 2.3e-10 40.2 0.0 2.2e-09 37.0 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.8 AJA92001.1 - 3.6e-09 36.3 1.0 8.5e-09 35.0 0.2 2.0 2 1 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 AJA92001.1 - 7.9e-08 32.3 0.1 1.8e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.14 AJA92001.1 - 0.069 12.7 0.0 0.19 11.2 0.0 1.7 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DUF3182 PF11379.3 AJA92001.1 - 0.13 10.9 0.0 0.2 10.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3182) Pox_G7 PF05503.7 AJA92002.1 - 0.025 13.1 0.0 0.027 13.1 0.0 1.1 1 0 0 1 1 1 0 Poxvirus G7-like FISNA PF14484.1 AJA92002.1 - 0.041 13.8 1.3 0.065 13.2 0.9 1.3 1 0 0 1 1 1 0 Fish-specific NACHT associated domain MM_CoA_mutase PF01642.17 AJA92003.1 - 1.6e-187 623.8 0.3 1.8e-187 623.6 0.2 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase DUF2203 PF09969.4 AJA92003.1 - 0.16 12.2 1.1 1.3 9.2 0.0 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Glycophorin_A PF01102.13 AJA92004.1 - 0.014 15.1 0.1 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Glycophorin A DUF2628 PF10947.3 AJA92004.1 - 0.019 14.7 2.5 0.02 14.6 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) TauE PF01925.14 AJA92004.1 - 0.036 13.5 3.3 0.04 13.3 2.3 1.1 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE DUF2427 PF10348.4 AJA92004.1 - 0.067 12.7 3.1 0.073 12.6 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) DUF1469 PF07332.6 AJA92004.1 - 0.088 12.5 3.2 0.099 12.3 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF3487 PF11990.3 AJA92004.1 - 1.6 8.1 4.0 1.7 8.0 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF2207 PF09972.4 AJA92004.1 - 4.2 5.8 5.4 4.3 5.8 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1049 PF06305.6 AJA92004.1 - 7.7 6.0 6.9 1.8 8.1 2.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1049) Hydantoinase_A PF01968.13 AJA92005.1 - 1.5e-53 181.8 3.3 1.5e-53 181.8 2.3 2.6 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 AJA92005.1 - 4.1e-23 81.7 6.8 1.7e-21 76.5 2.8 2.6 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 AJA92005.1 - 1.7e-06 26.6 4.6 0.0012 17.2 0.3 2.4 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 AJA92005.1 - 2.2e-05 23.9 3.8 0.0032 16.8 1.1 3.0 2 1 1 3 3 3 2 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.16 AJA92005.1 - 0.0004 19.7 0.8 0.0015 17.9 0.6 2.0 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain GHMP_kinases_C PF08544.8 AJA92005.1 - 0.012 15.7 0.2 0.15 12.3 0.0 2.8 3 0 0 3 3 3 0 GHMP kinases C terminal UPF0565 PF10561.4 AJA92005.1 - 0.074 11.9 0.8 0.19 10.6 0.5 1.7 1 1 0 1 1 1 0 Uncharacterised protein family UPF0565 FtsA PF14450.1 AJA92005.1 - 8.1 6.3 17.2 5.5 6.8 3.9 3.7 4 2 1 5 5 5 0 Cell division protein FtsA DUF643 PF04867.7 AJA92006.1 - 0.76 10.1 4.5 0.74 10.2 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF643) CbiD PF01888.12 AJA92007.1 - 2.3e-85 285.7 5.2 3.4e-85 285.1 3.6 1.2 1 0 0 1 1 1 1 CbiD DUF4371 PF14291.1 AJA92007.1 - 0.061 12.8 0.1 0.098 12.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4371) DUF3042 PF11240.3 AJA92007.1 - 0.31 10.8 2.3 0.77 9.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) RNase_PH PF01138.16 AJA92008.1 - 5.5e-37 127.0 0.0 7.2e-37 126.6 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 AJA92008.1 - 2.3e-13 49.8 0.1 4.6e-13 48.9 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DBI_PRT PF02277.12 AJA92008.1 - 0.048 12.7 0.8 0.087 11.8 0.5 1.4 2 0 0 2 2 2 0 Phosphoribosyltransferase Arginase PF00491.16 AJA92009.1 - 2e-69 233.9 0.0 2.6e-69 233.6 0.0 1.0 1 0 0 1 1 1 1 Arginase family Ferritin PF00210.19 AJA92010.1 - 5.2e-18 65.1 4.4 6.5e-18 64.8 3.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 AJA92010.1 - 4e-06 27.1 3.3 8.1e-06 26.2 2.3 1.5 1 1 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.1 AJA92010.1 - 0.00015 21.7 0.9 0.00021 21.2 0.6 1.3 1 0 0 1 1 1 1 Ferritin-like domain DUF4352 PF11611.3 AJA92011.1 - 0.11 12.7 0.0 0.46 10.6 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4352) FixP_N PF14715.1 AJA92012.1 - 0.063 12.6 0.2 0.084 12.2 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP GATase_3 PF07685.9 AJA92013.1 - 1.3e-35 122.3 0.0 2e-35 121.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 AJA92013.1 - 1.4e-23 83.2 0.0 1.1e-22 80.3 0.0 2.1 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 AJA92013.1 - 6.6e-16 58.5 0.9 1.9e-09 37.4 0.0 2.9 2 1 1 3 3 3 2 AAA domain Fer4_NifH PF00142.13 AJA92013.1 - 0.012 14.8 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Peptidase_S51 PF03575.12 AJA92013.1 - 0.022 14.4 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 Peptidase family S51 CTP_synth_N PF06418.9 AJA92013.1 - 0.033 13.2 0.1 0.074 12.1 0.1 1.5 1 0 0 1 1 1 0 CTP synthase N-terminus SRP54 PF00448.17 AJA92013.1 - 0.06 12.7 0.5 0.28 10.6 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Glycos_transf_1 PF00534.15 AJA92014.1 - 1.1e-26 93.3 0.3 2.1e-24 85.8 0.0 2.2 1 1 1 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 AJA92014.1 - 8e-13 48.4 0.0 5.6e-12 45.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 AJA92014.1 - 1.8e-11 44.3 0.0 2.7e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 AJA92014.1 - 1e-05 25.7 0.0 0.0084 16.2 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 AJA92014.1 - 0.00011 22.0 0.4 0.00022 21.0 0.2 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 AJA92014.1 - 0.00014 21.6 0.5 0.0011 18.6 0.3 2.2 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Epimerase_2 PF02350.14 AJA92014.1 - 0.00039 19.3 0.1 0.00057 18.7 0.1 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase eIF-6 PF01912.13 AJA92014.1 - 0.063 12.3 0.6 0.18 10.8 0.5 1.7 1 1 0 1 1 1 0 eIF-6 family HTH_45 PF14947.1 AJA92015.1 - 0.0033 17.2 0.4 0.0048 16.6 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DUF3116 PF11313.3 AJA92015.1 - 0.015 14.8 0.9 0.055 13.0 0.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) DUF4364 PF14277.1 AJA92015.1 - 0.028 14.0 0.3 0.041 13.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DAO PF01266.19 AJA92016.1 - 3.7e-06 26.0 0.5 0.0017 17.3 0.2 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 AJA92016.1 - 3.5e-05 23.7 0.2 0.00022 21.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 AJA92016.1 - 0.0002 21.6 1.8 0.59 10.5 0.0 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 AJA92016.1 - 0.00042 19.3 0.0 0.43 9.4 0.0 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein FAD_binding_3 PF01494.14 AJA92016.1 - 0.00074 18.6 0.5 0.44 9.5 0.4 3.0 2 1 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 AJA92016.1 - 0.00099 18.2 1.4 0.0021 17.2 0.2 2.0 2 0 0 2 2 2 1 Thi4 family Toxin_39 PF15500.1 AJA92016.1 - 0.0011 19.0 0.2 0.0059 16.7 0.0 2.2 2 1 0 2 2 2 1 Putative RNase-like toxin FAD_binding_2 PF00890.19 AJA92016.1 - 0.0014 17.5 0.8 0.0025 16.7 0.6 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.2 AJA92016.1 - 0.0031 16.6 0.6 0.011 14.8 0.4 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 AJA92016.1 - 0.0064 15.0 0.1 0.013 13.9 0.0 1.5 1 0 0 1 1 1 1 HI0933-like protein Trp_halogenase PF04820.9 AJA92016.1 - 0.033 12.8 0.9 2.5 6.6 0.0 2.9 3 0 0 3 3 3 0 Tryptophan halogenase Pyr_redox_2 PF07992.9 AJA92016.1 - 0.04 13.7 0.2 0.11 12.4 0.0 1.8 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase EnY2 PF10163.4 AJA92016.1 - 0.14 12.1 0.8 0.31 11.0 0.1 2.0 2 0 0 2 2 2 0 Transcription factor e(y)2 Amino_oxidase PF01593.19 AJA92016.1 - 0.15 11.0 0.2 0.27 10.2 0.1 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase PALP PF00291.20 AJA92017.1 - 1.3e-40 139.5 0.0 2.3e-40 138.7 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PK_C PF02887.11 AJA92017.1 - 0.12 11.9 1.0 5.8 6.5 0.1 2.3 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain ABC_tran PF00005.22 AJA92018.1 - 9.1e-28 97.2 0.0 2.1e-27 96.0 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 AJA92018.1 - 6.8e-16 59.0 0.2 4.2e-09 36.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.1 AJA92018.1 - 5.4e-09 35.6 0.1 3.5e-05 23.0 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.14 AJA92018.1 - 7.4e-06 25.3 0.3 0.0092 15.2 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 AJA92018.1 - 2.7e-05 24.5 2.2 6.3e-05 23.3 1.6 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 AJA92018.1 - 0.00036 20.7 0.4 0.35 11.0 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.1 AJA92018.1 - 0.0011 18.4 0.0 0.0021 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.12 AJA92018.1 - 0.0018 17.6 0.1 0.59 9.5 0.0 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.1 AJA92018.1 - 0.014 15.3 0.3 2.8 7.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 AJA92018.1 - 0.014 14.3 0.5 0.062 12.1 0.0 1.9 2 0 0 2 2 2 0 NB-ARC domain AAA_16 PF13191.1 AJA92018.1 - 0.014 15.4 0.0 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.1 AJA92018.1 - 0.018 14.9 0.0 0.64 9.9 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.1 AJA92018.1 - 0.022 14.8 0.1 0.5 10.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.1 AJA92018.1 - 0.049 14.4 0.1 0.095 13.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 AJA92018.1 - 0.061 11.7 5.4 0.9 7.9 0.1 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 AJA92018.1 - 0.066 13.1 0.7 0.13 12.2 0.5 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF258 PF03193.11 AJA92018.1 - 0.078 12.1 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MobB PF03205.9 AJA92018.1 - 0.079 12.6 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B UPF0079 PF02367.12 AJA92018.1 - 0.11 12.1 0.0 0.27 10.8 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_33 PF13671.1 AJA92018.1 - 0.14 11.9 0.2 0.33 10.8 0.1 1.6 2 0 0 2 2 2 0 AAA domain cobW PF02492.14 AJA92018.1 - 0.15 11.5 0.1 0.15 11.5 0.1 1.9 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Tautomerase PF01361.16 AJA92020.1 - 2.6e-17 62.1 0.0 2.7e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.1 AJA92020.1 - 4.5e-11 42.6 0.0 4.7e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme DUF1904 PF08921.6 AJA92020.1 - 0.015 15.3 0.0 0.015 15.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1904) Tautomerase_3 PF14832.1 AJA92020.1 - 0.023 14.7 0.0 0.023 14.7 0.0 1.0 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme Arch_ATPase PF01637.13 AJA92020.1 - 0.044 13.4 0.0 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 Archaeal ATPase HTH_AsnC-type PF13404.1 AJA92021.1 - 3.7e-10 39.1 0.0 4.9e-05 22.7 0.0 2.4 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 AJA92021.1 - 1.5e-07 30.6 0.3 8.3e-06 25.0 0.1 3.0 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 AJA92021.1 - 0.0028 17.3 0.0 3.5 7.3 0.0 3.5 2 1 0 2 2 2 1 AsnC family Sigma70_r4 PF04545.11 AJA92021.1 - 0.013 14.7 0.0 0.3 10.4 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 DUF2316 PF10078.4 AJA92021.1 - 0.014 15.3 0.0 7.2 6.6 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2316) FeoC PF09012.5 AJA92021.1 - 0.018 14.7 0.0 0.04 13.6 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator LexA_DNA_bind PF01726.11 AJA92021.1 - 0.02 14.4 0.1 0.1 12.1 0.0 2.0 2 0 0 2 2 2 0 LexA DNA binding domain DUF3650 PF12368.3 AJA92021.1 - 0.028 13.9 0.0 3.1 7.3 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3650) DUF2250 PF10007.4 AJA92021.1 - 0.031 14.1 0.0 6 6.8 0.0 2.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_10 PF04967.7 AJA92021.1 - 0.045 13.3 0.0 4.4 6.9 0.0 2.7 2 0 0 2 2 2 0 HTH DNA binding domain Sigma70_r4_2 PF08281.7 AJA92021.1 - 0.049 13.1 0.0 0.21 11.0 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 DUF3791 PF12668.2 AJA92021.1 - 0.067 12.8 0.0 7.8 6.1 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) IF2_N PF04760.10 AJA92021.1 - 0.083 12.5 0.8 24 4.6 0.1 3.3 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region MarR_2 PF12802.2 AJA92021.1 - 0.083 12.5 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Tnp_IS630 PF01710.11 AJA92021.1 - 0.13 11.9 1.4 0.99 9.0 0.0 2.7 3 0 0 3 3 3 0 Transposase Hexapep PF00132.19 AJA92022.1 - 8.8e-10 37.6 11.0 3.8e-05 22.9 3.5 3.8 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 AJA92022.1 - 1.4e-07 30.9 7.6 0.0033 16.9 3.3 3.9 3 1 1 4 4 4 4 Hexapeptide repeat of succinyl-transferase Pkinase PF00069.20 AJA92023.1 - 1.6e-14 53.6 0.3 2.2e-14 53.2 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.9 AJA92023.1 - 6.4e-09 35.1 0.1 3.1e-07 29.6 0.1 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.12 AJA92023.1 - 1e-06 28.0 0.1 1.6e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.17 AJA92023.1 - 3.5e-06 26.5 0.0 5e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 AJA92023.1 - 3.9e-05 23.5 0.0 0.033 13.9 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family WaaY PF06176.6 AJA92023.1 - 4.1e-05 22.9 0.9 4.8e-05 22.7 0.6 1.4 1 1 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Kinase-like PF14531.1 AJA92023.1 - 0.0075 15.2 0.0 0.011 14.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.15 AJA92023.1 - 0.013 15.0 0.2 0.052 13.1 0.1 1.7 1 1 1 2 2 2 0 Choline/ethanolamine kinase EcKinase PF02958.15 AJA92023.1 - 0.061 12.4 0.1 0.077 12.1 0.1 1.2 1 0 0 1 1 1 0 Ecdysteroid kinase CxxCxxCC PF03692.10 AJA92024.1 - 6.8e-09 36.0 0.0 1.5e-08 35.0 0.0 1.6 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain NUDIX PF00293.23 AJA92025.1 - 3.2e-16 59.1 0.0 4.2e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Ribosomal_S10 PF00338.17 AJA92026.1 - 2.2e-25 88.3 0.0 2.4e-25 88.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e DHBP_synthase PF00926.14 AJA92027.1 - 4.8e-66 221.6 0.0 5.4e-66 221.5 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PAF-AH_p_II PF03403.8 AJA92027.1 - 0.00064 18.1 0.1 0.0011 17.3 0.0 1.4 2 0 0 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II PGPGW PF09656.5 AJA92028.1 - 0.071 12.4 0.7 0.12 11.6 0.5 1.3 1 0 0 1 1 1 0 Putative transmembrane protein (PGPGW) NAC PF01849.13 AJA92029.1 - 6.9e-16 57.5 5.3 3.6e-15 55.2 3.0 1.9 2 0 0 2 2 2 1 NAC domain UBA PF00627.26 AJA92029.1 - 8.8e-06 25.4 0.3 8.8e-06 25.4 0.2 2.3 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.1 AJA92029.1 - 0.0038 16.7 0.5 0.0056 16.1 0.3 1.3 1 0 0 1 1 1 1 UBA-like domain FdtA PF05523.6 AJA92029.1 - 0.049 13.1 0.2 0.063 12.7 0.2 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal ScdA_N PF04405.9 AJA92029.1 - 0.072 12.4 0.8 11 5.4 0.0 2.8 2 1 1 3 3 3 0 Domain of Unknown function (DUF542) Zein-binding PF04576.10 AJA92029.1 - 0.092 12.8 0.4 0.092 12.8 0.3 1.7 2 1 0 2 2 2 0 Zein-binding Na_H_Exchanger PF00999.16 AJA92030.1 - 9.9e-61 205.3 55.7 1.3e-60 204.9 38.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF655 PF04919.7 AJA92031.1 - 3.6e-47 160.3 0.9 4.1e-47 160.2 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_3 PF12836.2 AJA92031.1 - 0.0032 17.3 0.9 0.042 13.7 0.1 2.6 3 1 0 3 3 3 1 Helix-hairpin-helix motif Transposase_20 PF02371.11 AJA92031.1 - 0.02 15.0 0.0 0.27 11.3 0.0 2.2 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family HHH_6 PF14579.1 AJA92031.1 - 0.034 14.1 0.1 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif Formyl_trans_N PF00551.14 AJA92032.1 - 1.4e-13 50.8 0.0 1.9e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.13 AJA92032.1 - 0.011 15.8 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 0 Formyl transferase, C-terminal domain tRNA_int_endo PF01974.12 AJA92033.1 - 7.6e-18 64.0 0.1 1.5e-17 63.1 0.1 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 AJA92033.1 - 7.7e-12 44.5 0.5 6.7e-09 35.1 0.0 2.3 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain Ribosomal_60s PF00428.14 AJA92034.1 - 1.7e-14 53.9 18.9 1.9e-14 53.7 13.1 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Ribosomal_S28e PF01200.13 AJA92034.1 - 0.086 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S28e PepSY_2 PF13670.1 AJA92034.1 - 0.26 11.2 8.0 1.5 8.7 2.9 2.1 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain DUF3138 PF11336.3 AJA92034.1 - 0.54 8.3 4.9 0.6 8.2 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) YtkA PF13115.1 AJA92034.1 - 2.7 8.4 7.9 5 7.5 0.7 2.1 1 1 1 2 2 2 0 YtkA-like Abi PF02517.11 AJA92035.1 - 2.3e-15 56.4 4.8 2.3e-15 56.4 3.3 2.8 3 1 0 3 3 3 1 CAAX protease self-immunity NAD_binding_7 PF13241.1 AJA92036.1 - 5.3e-17 61.9 0.5 3.7e-16 59.2 0.0 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding Shikimate_DH PF01488.15 AJA92036.1 - 5e-05 23.4 2.2 5.8e-05 23.2 0.6 1.8 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.13 AJA92036.1 - 0.0011 18.9 0.2 0.0035 17.3 0.0 1.9 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.14 AJA92036.1 - 0.0095 15.1 0.0 0.016 14.3 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SIS PF01380.17 AJA92036.1 - 0.015 14.9 0.9 0.16 11.5 0.1 2.6 1 1 0 2 2 2 0 SIS domain CPSase_L_chain PF00289.17 AJA92036.1 - 0.015 15.3 0.1 0.091 12.8 0.0 2.0 1 1 1 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain IlvN PF07991.7 AJA92036.1 - 0.039 13.3 0.3 0.069 12.5 0.1 1.6 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Oxidored_nitro PF00148.14 AJA92036.1 - 0.045 12.4 0.0 0.076 11.6 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase XdhC_C PF13478.1 AJA92036.1 - 0.061 13.6 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain Peripla_BP_1 PF00532.16 AJA92036.1 - 0.14 11.3 1.9 2.3 7.3 0.1 2.6 2 1 1 3 3 3 0 Periplasmic binding proteins and sugar binding domain of LacI family FtsK_SpoIIIE_N PF12538.3 AJA92036.1 - 0.53 10.3 7.5 0.095 12.8 0.5 2.4 1 1 0 2 2 2 0 DNA transporter DUF3793 PF12672.2 AJA92036.1 - 2.3 7.7 7.2 0.74 9.3 1.5 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3793) Cupredoxin_1 PF13473.1 AJA92037.1 - 0.00024 20.9 0.0 0.00066 19.5 0.0 1.8 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 AJA92037.1 - 0.0055 16.9 0.0 0.022 15.0 0.0 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TFIIB PF00382.14 AJA92038.1 - 9.5e-22 76.6 5.0 1.6e-12 47.0 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 AJA92038.1 - 3e-05 23.2 1.2 6.2e-05 22.2 0.1 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Rrf2 PF02082.15 AJA92038.1 - 6.7e-05 22.9 0.4 0.023 14.8 0.1 2.5 2 1 0 2 2 2 1 Transcriptional regulator HTH_24 PF13412.1 AJA92038.1 - 0.00037 19.8 0.7 0.18 11.2 0.1 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding Cyclin_N PF00134.18 AJA92038.1 - 0.0018 17.8 0.3 0.011 15.3 0.0 2.1 1 1 1 2 2 2 1 Cyclin, N-terminal domain HTH_IclR PF09339.5 AJA92038.1 - 0.0036 16.8 0.0 0.057 13.0 0.0 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.14 AJA92038.1 - 0.0053 16.4 0.2 0.94 9.2 0.0 2.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.1 AJA92038.1 - 0.0087 15.8 0.4 2 8.2 0.0 2.7 3 0 0 3 3 2 1 Crp-like helix-turn-helix domain HTH_6 PF01418.12 AJA92038.1 - 0.019 14.6 1.0 0.54 10.0 0.2 3.1 2 1 1 3 3 3 0 Helix-turn-helix domain, rpiR family Cyclin_C PF02984.14 AJA92038.1 - 0.02 14.8 0.3 0.083 12.8 0.1 2.0 2 0 0 2 2 2 0 Cyclin, C-terminal domain HTH_26 PF13443.1 AJA92038.1 - 0.021 14.9 0.6 12 6.2 0.1 2.9 2 1 1 3 3 3 0 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.1 AJA92038.1 - 0.024 14.3 0.4 1.7 8.4 0.0 2.6 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.11 AJA92038.1 - 0.026 13.8 0.0 8.1 5.8 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_27 PF13463.1 AJA92038.1 - 0.027 14.7 0.2 1.5 9.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_3 PF01381.17 AJA92038.1 - 0.055 13.3 0.4 6.7 6.6 0.0 2.9 3 0 0 3 3 2 0 Helix-turn-helix Elf1 PF05129.8 AJA92038.1 - 0.059 13.0 1.0 0.16 11.7 0.7 1.6 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like IBR PF01485.16 AJA92038.1 - 0.063 13.1 0.9 0.14 12.0 0.6 1.6 1 0 0 1 1 1 0 IBR domain HTH_28 PF13518.1 AJA92038.1 - 0.066 13.2 0.1 0.36 10.8 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Mga PF08280.6 AJA92038.1 - 0.075 12.7 0.1 0.25 11.1 0.0 1.9 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_37 PF13744.1 AJA92038.1 - 0.12 12.1 0.6 0.63 9.8 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_S27e PF01667.12 AJA92038.1 - 0.36 10.3 2.4 0.71 9.4 1.7 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 HTH_11 PF08279.7 AJA92038.1 - 0.7 9.5 4.5 0.78 9.4 0.1 3.2 5 0 0 5 5 4 0 HTH domain ATP-synt_C PF00137.16 AJA92039.1 - 8.5e-20 70.4 16.6 8.5e-20 70.4 11.5 1.8 2 0 0 2 2 2 1 ATP synthase subunit C AA_permease_2 PF13520.1 AJA92039.1 - 0.046 12.2 6.8 0.054 12.0 4.7 1.0 1 0 0 1 1 1 0 Amino acid permease Trypan_PARP PF05887.6 AJA92039.1 - 0.16 11.7 0.7 0.21 11.3 0.5 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) 2-Hacid_dh_C PF02826.14 AJA92040.1 - 1.8e-62 209.6 0.1 2.7e-62 209.0 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 AJA92040.1 - 3.5e-32 110.6 0.0 3.9e-32 110.4 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 AJA92040.1 - 2.4e-09 37.2 0.1 3.6e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.7 AJA92040.1 - 6.7e-05 22.3 0.6 0.00014 21.2 0.2 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 AJA92040.1 - 0.00073 19.9 0.0 0.0016 18.8 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.16 AJA92040.1 - 0.022 14.6 0.8 0.037 13.8 0.1 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TrkA_N PF02254.13 AJA92040.1 - 0.063 13.2 0.1 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Gp_dh_N PF00044.19 AJA92040.1 - 0.17 11.8 1.8 0.3 11.0 1.3 1.6 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ribosomal_S8 PF00410.14 AJA92041.1 - 7e-23 80.8 0.1 8.6e-23 80.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 DUF4270 PF14092.1 AJA92041.1 - 0.057 12.0 0.1 0.059 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4270) ATP_bind_1 PF03029.12 AJA92042.1 - 5e-54 183.3 0.1 5.6e-54 183.1 0.1 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_17 PF13207.1 AJA92042.1 - 0.00046 20.9 0.1 0.00088 20.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 AJA92042.1 - 0.00078 19.4 0.0 0.0012 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain DUF2075 PF09848.4 AJA92042.1 - 0.0019 17.2 0.0 0.0025 16.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) GTP_EFTU PF00009.22 AJA92042.1 - 0.0042 16.5 0.3 0.79 9.1 0.0 2.9 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.18 AJA92042.1 - 0.023 14.6 0.1 0.075 12.9 0.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.1 AJA92042.1 - 0.034 14.4 0.0 0.057 13.7 0.0 1.4 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 AJA92042.1 - 0.038 13.0 0.0 0.068 12.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin PduV-EutP PF10662.4 AJA92042.1 - 0.044 13.2 0.9 12 5.4 0.0 3.1 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.1 AJA92042.1 - 0.054 13.6 0.0 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.17 AJA92042.1 - 0.054 12.9 0.2 1.8 7.9 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_24 PF13479.1 AJA92042.1 - 0.054 13.0 0.0 0.083 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 AJA92042.1 - 0.15 11.6 0.1 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.14 AJA92042.1 - 0.54 9.6 2.8 16 4.9 0.1 2.9 2 1 1 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain DNA_primase_S PF01896.14 AJA92043.1 - 5.9e-18 65.0 1.4 3.8e-16 59.1 0.0 2.3 2 0 0 2 2 2 2 Eukaryotic and archaeal DNA primase small subunit MutS_IV PF05190.13 AJA92043.1 - 0.0019 18.2 0.0 0.0047 17.0 0.0 1.6 1 0 0 1 1 1 1 MutS family domain IV Ribosomal_L32p PF01783.18 AJA92043.1 - 0.14 12.3 0.3 0.34 11.1 0.2 1.6 1 0 0 1 1 1 0 Ribosomal L32p protein family zinc_ribbon_6 PF14599.1 AJA92043.1 - 3.5 7.4 10.9 1.6 8.5 2.7 2.7 1 1 1 2 2 2 0 Zinc-ribbon Opy2 PF09463.5 AJA92043.1 - 9 6.4 9.4 19 5.4 6.5 1.6 1 0 0 1 1 1 0 Opy2 protein ALS_ss_C PF10369.4 AJA92044.1 - 1.4e-24 85.5 3.5 1.4e-22 79.1 0.2 2.2 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.1 AJA92044.1 - 6.3e-17 61.1 0.1 1.8e-16 59.7 0.1 1.8 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 AJA92044.1 - 4.6e-16 57.9 0.1 9.4e-16 56.9 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 AJA92044.1 - 2e-07 31.2 0.5 3.6e-07 30.4 0.4 1.4 1 0 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.7 AJA92044.1 - 0.082 13.0 0.4 0.17 12.0 0.1 1.6 1 1 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region DUF35_N PF12172.3 AJA92046.1 - 0.0049 16.7 0.1 0.0065 16.3 0.0 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-CCHC_2 PF13696.1 AJA92046.1 - 0.0065 15.9 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Zinc knuckle DUF2718 PF10918.3 AJA92047.1 - 0.043 13.8 0.8 0.069 13.2 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) Peptidase_M22 PF00814.20 AJA92048.1 - 6.5e-78 261.9 0.0 7.7e-78 261.6 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family CmcH_NodU PF02543.10 AJA92048.1 - 0.076 12.1 0.0 0.14 11.2 0.0 1.5 2 0 0 2 2 2 0 Carbamoyltransferase DUF539 PF04400.8 AJA92049.1 - 0.075 12.5 0.9 0.11 11.9 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF539) ACT_7 PF13840.1 AJA92050.1 - 0.011 15.2 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 0 ACT domain Aminotran_5 PF00266.14 AJA92051.1 - 2.3e-64 217.5 0.0 2.6e-64 217.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 AJA92051.1 - 0.0007 18.6 0.0 0.0014 17.6 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class I and II Sld5 PF05916.6 AJA92053.1 - 8.3e-08 32.4 0.7 1.1e-07 32.0 0.5 1.1 1 0 0 1 1 1 1 GINS complex protein GatB_N PF02934.10 AJA92054.1 - 0.22 10.3 2.8 0.26 10.0 1.9 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain H_PPase PF03030.11 AJA92055.1 - 1.4e-221 737.4 49.0 1.6e-221 737.2 34.0 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase Myc_target_1 PF15179.1 AJA92055.1 - 1.6 8.2 0.0 1.6 8.2 0.0 2.4 3 0 0 3 3 3 0 Myc target protein 1 Rieske PF00355.21 AJA92056.1 - 6.6e-17 60.8 0.0 7.3e-17 60.7 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 AJA92056.1 - 2.9e-10 39.7 0.0 3.4e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain PhoU PF01895.14 AJA92057.1 - 4.7e-11 42.9 6.2 2.2e-10 40.8 1.2 2.4 2 0 0 2 2 2 1 PhoU domain Antitoxin-MazE PF04014.13 AJA92057.1 - 4.3e-07 29.5 0.0 1.1e-06 28.2 0.0 1.8 1 0 0 1 1 1 1 Antidote-toxin recognition MazE P2 PF07194.6 AJA92057.1 - 0.13 12.1 3.5 0.14 12.0 0.1 2.7 3 0 0 3 3 3 0 P2 response regulator binding domain NAD_kinase PF01513.16 AJA92058.1 - 5.9e-34 117.1 1.0 7.7e-34 116.7 0.7 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 AJA92058.1 - 0.038 13.4 0.1 0.1 12.0 0.0 1.7 1 1 0 1 1 1 0 Diacylglycerol kinase catalytic domain IF-2B PF01008.12 AJA92059.1 - 1.5e-88 296.4 1.2 1.8e-88 296.2 0.8 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family CARDB PF07705.6 AJA92060.1 - 0.00044 20.2 3.1 0.26 11.3 0.0 2.3 2 0 0 2 2 2 2 CARDB Sulphotransf PF09037.5 AJA92061.1 - 0.051 13.0 0.1 0.058 12.8 0.1 1.1 1 0 0 1 1 1 0 Stf0 sulphotransferase Gag_p10 PF02337.12 AJA92061.1 - 0.13 12.0 0.2 0.22 11.2 0.1 1.6 1 1 0 1 1 1 0 Retroviral GAG p10 protein DUF217 PF02697.9 AJA92062.1 - 0.14 12.4 3.7 3 8.1 2.0 2.7 2 1 0 2 2 2 0 Uncharacterized ACR, COG1753 Acetyltransf_7 PF13508.1 AJA92063.1 - 2.9e-11 43.3 0.4 4.7e-11 42.6 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 AJA92063.1 - 2.2e-08 34.0 0.0 2.8e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_5 PF13444.1 AJA92063.1 - 3.4e-07 30.7 0.0 1.2e-06 29.0 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 AJA92063.1 - 0.0057 16.7 0.0 0.0068 16.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 AJA92063.1 - 0.0088 15.8 0.0 0.022 14.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain zinc_ribbon_2 PF13240.1 AJA92064.1 - 0.0061 16.0 0.7 0.008 15.6 0.5 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA92064.1 - 0.01 15.0 0.4 0.014 14.6 0.3 1.3 1 1 0 1 1 1 0 zinc-ribbon domain Rad50_zn_hook PF04423.9 AJA92064.1 - 0.033 13.6 0.6 0.039 13.4 0.4 1.1 1 0 0 1 1 1 0 Rad50 zinc hook motif Sgf11 PF08209.6 AJA92064.1 - 0.036 13.3 1.3 0.056 12.7 0.1 1.8 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-TFIIB PF13453.1 AJA92064.1 - 0.071 12.3 0.7 0.092 11.9 0.5 1.2 1 0 0 1 1 1 0 Transcription factor zinc-finger OrfB_Zn_ribbon PF07282.6 AJA92064.1 - 0.093 12.4 0.6 0.096 12.3 0.4 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.14 AJA92064.1 - 0.095 12.2 0.3 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Prok-RING_1 PF14446.1 AJA92064.1 - 0.11 12.2 0.8 0.17 11.6 0.5 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Ogr_Delta PF04606.7 AJA92064.1 - 0.12 12.1 0.9 0.13 11.9 0.6 1.2 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger DUF1451 PF07295.6 AJA92064.1 - 0.12 12.1 0.2 0.13 11.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) DUF329 PF03884.9 AJA92064.1 - 0.44 10.1 2.8 0.73 9.4 2.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF329) zf-C2HC_2 PF13913.1 AJA92064.1 - 1.4 8.6 6.6 0.6 9.8 2.7 1.8 1 1 0 1 1 1 0 zinc-finger of a C2HC-type DUF2161 PF09929.4 AJA92065.1 - 0.061 13.2 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2161) Ribonuc_red_lgN PF00317.16 AJA92066.1 - 0.069 12.9 0.1 0.08 12.7 0.1 1.1 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain Hydrolase_3 PF08282.7 AJA92067.1 - 1.3e-09 38.0 2.1 1.7e-09 37.6 0.8 1.6 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 AJA92067.1 - 8.2e-09 36.1 0.6 1.2e-05 25.8 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 AJA92067.1 - 4.1e-05 23.4 0.2 0.0014 18.5 0.1 2.3 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD PF12710.2 AJA92067.1 - 0.00022 21.4 1.0 0.0025 17.9 0.0 2.1 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase DUF3319 PF11782.3 AJA92067.1 - 0.019 14.7 0.1 0.89 9.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3319) GATase PF00117.23 AJA92068.1 - 2.9e-56 189.9 0.1 3.2e-56 189.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 AJA92068.1 - 1.3e-10 41.1 0.0 1.7e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 SNO PF01174.14 AJA92068.1 - 0.00018 21.1 0.2 0.00042 19.9 0.1 1.7 1 1 0 1 1 1 1 SNO glutamine amidotransferase family DJ-1_PfpI PF01965.19 AJA92068.1 - 0.0029 17.0 0.0 0.0046 16.4 0.0 1.4 1 0 0 1 1 1 1 DJ-1/PfpI family RNase_PH PF01138.16 AJA92069.1 - 1.4e-22 80.4 0.0 3.1e-22 79.2 0.0 1.6 2 0 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 AJA92069.1 - 6.6e-14 51.6 0.2 1.6e-13 50.4 0.1 1.7 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 AsnC_trans_reg PF01037.16 AJA92070.1 - 5e-11 42.1 0.2 5.6e-11 41.9 0.1 1.0 1 0 0 1 1 1 1 AsnC family DUF4041 PF13250.1 AJA92070.1 - 0.13 11.8 0.4 0.26 10.8 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) GHMP_kinases_N PF00288.21 AJA92071.1 - 1.2e-11 44.4 0.4 2.9e-11 43.2 0.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 AJA92071.1 - 0.024 14.8 0.0 0.058 13.5 0.0 1.7 1 1 0 1 1 1 0 GHMP kinases C terminal B12-binding PF02310.14 AJA92072.1 - 1.2e-10 41.3 0.0 1.9e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 AJA92072.1 - 6.2e-09 35.7 0.0 9.9e-09 35.1 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain OKR_DC_1_N PF03709.10 AJA92072.1 - 0.0058 16.6 0.0 0.14 12.2 0.0 2.3 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain Response_reg PF00072.19 AJA92072.1 - 0.0059 16.6 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain SAC3 PF12209.3 AJA92072.1 - 7.8 6.7 7.5 24 5.1 0.8 3.6 3 1 0 3 3 3 0 Leucine permease transcriptional regulator helical domain PALP PF00291.20 AJA92073.1 - 4.9e-23 81.8 0.0 8.5e-22 77.7 0.0 2.4 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme S10_plectin PF03501.10 AJA92073.1 - 0.06 13.2 0.0 0.26 11.1 0.0 2.0 1 1 1 2 2 2 0 Plectin/S10 domain SecY PF00344.15 AJA92074.1 - 2.7e-81 273.2 18.4 3.2e-81 272.9 12.8 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 AJA92074.1 - 1.1e-11 44.0 1.8 2.6e-11 42.8 0.3 2.4 2 0 0 2 2 2 1 Plug domain of Sec61p Phage_holin_5 PF06946.6 AJA92074.1 - 0.066 13.3 4.0 0.79 9.9 0.1 2.9 2 0 0 2 2 2 0 Phage holin Biotin_lipoyl PF00364.17 AJA92075.1 - 6.1e-17 61.0 5.2 6.1e-17 61.0 3.6 2.2 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 AJA92075.1 - 2e-13 49.7 10.5 1.7e-08 34.0 0.1 3.3 2 2 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.1 AJA92075.1 - 2e-06 28.1 1.2 0.055 13.8 0.1 2.9 3 1 0 3 3 3 2 HlyD family secretion protein HlyD_2 PF12700.2 AJA92075.1 - 2.3e-06 27.0 10.1 0.0052 15.9 0.1 3.1 2 1 1 3 3 3 2 HlyD family secretion protein HlyD PF00529.15 AJA92075.1 - 7.7e-06 25.4 3.5 0.0019 17.5 0.2 2.2 1 1 1 2 2 2 2 HlyD family secretion protein GCV_H PF01597.14 AJA92075.1 - 0.00069 19.2 1.5 0.00069 19.2 1.1 2.6 2 1 1 3 3 3 1 Glycine cleavage H-protein QRPTase_N PF02749.11 AJA92075.1 - 0.00074 19.2 1.4 0.24 11.2 0.0 2.8 2 1 1 3 3 3 2 Quinolinate phosphoribosyl transferase, N-terminal domain PASTA PF03793.14 AJA92075.1 - 0.0094 15.5 6.2 0.13 11.9 0.3 3.2 3 1 0 3 3 3 1 PASTA domain DUF2118 PF09891.4 AJA92075.1 - 0.015 15.0 0.4 0.015 15.0 0.3 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2118) DUF3114 PF11311.3 AJA92075.1 - 0.071 12.4 0.2 0.094 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3114) PYNP_C PF07831.8 AJA92075.1 - 0.11 12.0 0.6 4.6 6.7 0.1 2.5 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain NifU_N PF01592.11 AJA92075.1 - 0.12 12.3 0.8 0.41 10.5 0.4 2.0 1 1 1 2 2 2 0 NifU-like N terminal domain PTS_EIIA_1 PF00358.15 AJA92075.1 - 0.14 11.6 3.1 0.78 9.3 0.1 2.5 2 1 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Peptidase_M23 PF01551.17 AJA92075.1 - 0.16 12.0 2.6 10 6.2 0.0 3.2 2 1 0 3 3 3 0 Peptidase family M23 TP_methylase PF00590.15 AJA92076.1 - 1.5e-17 64.0 0.0 2.6e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.8 AJA92076.1 - 3.7e-11 42.5 0.8 3.7e-11 42.5 0.6 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF357) DUF2194 PF09960.4 AJA92076.1 - 0.00013 20.1 0.2 0.0064 14.5 0.0 2.1 1 1 1 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2194) Ala_racemase_C PF00842.16 AJA92076.1 - 0.039 13.3 0.0 0.15 11.4 0.0 1.9 2 0 0 2 2 2 0 Alanine racemase, C-terminal domain SH3BP5 PF05276.9 AJA92076.1 - 0.057 12.7 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) GatB_N PF02934.10 AJA92077.1 - 3e-97 324.9 0.0 4.2e-97 324.5 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 AJA92077.1 - 3.2e-31 108.0 8.2 5e-31 107.4 5.7 1.3 1 0 0 1 1 1 1 GatB domain TMP_2 PF06791.8 AJA92077.1 - 0.031 13.8 1.1 0.053 13.1 0.8 1.3 1 0 0 1 1 1 0 Prophage tail length tape measure protein DICT PF10069.4 AJA92078.1 - 0.014 14.8 0.0 0.022 14.2 0.0 1.2 1 0 0 1 1 1 0 Sensory domain found in DIguanylate Cyclases & Two-component systems GATase PF00117.23 AJA92080.1 - 4.5e-43 146.9 0.0 6.8e-43 146.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GMP_synt_C PF00958.17 AJA92080.1 - 5.4e-31 106.1 0.0 1.7e-30 104.5 0.1 1.9 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.12 AJA92080.1 - 2.7e-12 46.1 0.2 2.9e-06 26.3 0.0 2.2 2 0 0 2 2 2 2 NAD synthase Peptidase_C26 PF07722.8 AJA92080.1 - 3.4e-08 33.1 0.0 3.5e-07 29.8 0.0 2.2 1 1 0 1 1 1 1 Peptidase C26 tRNA_Me_trans PF03054.11 AJA92080.1 - 0.00024 19.8 0.0 0.0014 17.2 0.0 1.9 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.9 AJA92080.1 - 0.0036 16.7 0.0 0.073 12.5 0.0 2.2 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.14 AJA92080.1 - 0.024 14.4 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.16 AJA92080.1 - 0.024 14.1 0.0 0.054 12.9 0.0 1.6 1 0 0 1 1 1 0 Asparagine synthase HD PF01966.17 AJA92081.1 - 6.6e-16 58.4 0.2 1.5e-15 57.3 0.1 1.6 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 AJA92081.1 - 0.01 15.1 0.0 0.02 14.2 0.0 1.5 1 0 0 1 1 1 0 HDOD domain NusA_N PF08529.6 AJA92081.1 - 0.037 14.0 4.3 7.1 6.6 0.2 3.4 1 1 1 3 3 3 0 NusA N-terminal domain Zn-ribbon_8 PF09723.5 AJA92082.1 - 0.057 13.3 4.9 0.21 11.5 0.3 2.2 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.1 AJA92082.1 - 0.072 13.0 2.6 1.7 8.6 0.1 2.3 1 1 1 2 2 2 0 C2H2-type zinc finger zf-ribbon_3 PF13248.1 AJA92082.1 - 0.13 11.5 0.9 0.22 10.7 0.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain P12 PF12669.2 AJA92082.1 - 0.16 12.2 0.1 0.16 12.2 0.1 1.8 2 0 0 2 2 2 0 Virus attachment protein p12 family zf-C2H2 PF00096.21 AJA92082.1 - 0.32 11.4 2.5 3.9 8.0 0.1 2.2 1 1 1 2 2 2 0 Zinc finger, C2H2 type Ribosomal_L44 PF00935.14 AJA92082.1 - 4.3 7.4 5.9 12 5.9 4.0 1.8 1 1 0 1 1 1 0 Ribosomal protein L44 Rubredoxin PF00301.15 AJA92082.1 - 6.2 6.7 6.2 2.4e+02 1.6 4.3 2.1 1 1 0 1 1 1 0 Rubredoxin Iso_dh PF00180.15 AJA92083.1 - 5.3e-80 268.9 0.1 6.6e-80 268.6 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Imm46 PF15585.1 AJA92083.1 - 0.092 12.8 0.1 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 46 OTCace_N PF02729.16 AJA92084.1 - 3.1e-43 146.8 0.0 5.3e-43 146.0 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 AJA92084.1 - 7.2e-37 126.6 0.0 1.1e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ret_tiss PF10044.4 AJA92084.1 - 0.1 13.1 0.2 0.38 11.3 0.1 1.9 1 0 0 1 1 1 0 Retinal tissue protein DUF2149 PF09919.4 AJA92084.1 - 0.14 12.2 0.3 3.9 7.6 0.0 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) SNARE_assoc PF09335.6 AJA92085.1 - 4.7e-22 78.4 5.4 4.7e-22 78.4 3.8 1.7 1 1 1 2 2 2 1 SNARE associated Golgi protein MMPL PF03176.10 AJA92085.1 - 0.018 13.7 0.2 0.025 13.3 0.1 1.1 1 0 0 1 1 1 0 MMPL family Epimerase PF01370.16 AJA92086.1 - 2.8e-59 200.4 0.0 3.6e-59 200.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 AJA92086.1 - 9e-18 63.9 0.3 1.1e-17 63.6 0.2 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA92086.1 - 5.3e-17 61.6 0.0 7.6e-17 61.1 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 AJA92086.1 - 1.5e-15 56.8 0.1 4.5e-15 55.2 0.1 1.7 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.10 AJA92086.1 - 9e-12 44.4 0.1 4.4e-11 42.2 0.1 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Saccharop_dh PF03435.13 AJA92086.1 - 0.0044 16.0 0.0 0.0078 15.2 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 AJA92086.1 - 0.0055 16.7 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding Epimerase_Csub PF13950.1 AJA92086.1 - 0.032 14.1 0.0 0.071 13.0 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose 4-epimerase C-term subunit DapB_N PF01113.15 AJA92086.1 - 0.039 13.8 0.1 0.14 12.1 0.0 1.9 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus GrpE PF01025.14 AJA92087.1 - 2.9e-37 127.7 2.9 3.3e-37 127.5 2.0 1.0 1 0 0 1 1 1 1 GrpE RNA_pol_A_CTD PF03118.10 AJA92087.1 - 0.015 14.6 0.3 1.7 8.1 0.1 2.5 1 1 1 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain Prominin PF05478.6 AJA92087.1 - 0.038 11.5 0.3 0.045 11.2 0.2 1.1 1 0 0 1 1 1 0 Prominin M PF02370.11 AJA92087.1 - 0.23 11.9 2.6 2.3 8.8 0.7 2.9 2 0 0 2 2 2 0 M protein repeat ATP-grasp_5 PF13549.1 AJA92089.1 - 3e-67 226.0 0.2 4.4e-67 225.5 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 AJA92089.1 - 5.2e-48 162.1 0.2 1.4e-47 160.7 0.1 1.8 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 AJA92089.1 - 1.2e-25 89.9 0.1 4e-25 88.2 0.1 2.0 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 AJA92089.1 - 9.1e-11 42.1 0.2 3.5e-10 40.2 0.2 2.1 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.5 AJA92089.1 - 4.6e-07 29.4 2.0 7.9e-07 28.6 0.5 2.1 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_4 PF13535.1 AJA92089.1 - 0.0013 18.5 0.0 0.0029 17.3 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.6 AJA92089.1 - 0.0078 15.7 0.1 0.021 14.2 0.1 1.7 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.17 AJA92089.1 - 0.044 13.1 0.0 0.1 11.9 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain RNA_pol_Rpb5_C PF01191.14 AJA92089.1 - 0.1 12.2 0.0 0.31 10.6 0.0 1.8 1 0 0 1 1 1 0 RNA polymerase Rpb5, C-terminal domain TelA PF05816.6 AJA92090.1 - 0.09 11.4 0.7 0.1 11.2 0.5 1.0 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) ADIP PF11559.3 AJA92091.1 - 0.0093 15.8 0.2 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding CCDC144C PF14915.1 AJA92091.1 - 0.015 14.2 0.2 0.016 14.1 0.2 1.1 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region Toxin_52 PF15605.1 AJA92091.1 - 0.016 15.0 0.0 0.018 14.9 0.0 1.0 1 0 0 1 1 1 0 Putative toxin 52 DivIC PF04977.10 AJA92091.1 - 0.027 13.9 0.9 0.055 12.9 0.6 1.5 1 1 0 1 1 1 0 Septum formation initiator CorA PF01544.13 AJA92091.1 - 0.033 13.2 0.0 0.034 13.1 0.0 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF1192 PF06698.6 AJA92091.1 - 0.042 13.6 2.5 0.14 12.0 1.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) DUF2312 PF10073.4 AJA92091.1 - 0.079 12.3 1.2 0.11 11.8 0.8 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) Nup54 PF13874.1 AJA92091.1 - 0.11 12.2 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF2802 PF10975.3 AJA92091.1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2802) Kinetocho_Slk19 PF12709.2 AJA92091.1 - 0.33 11.0 1.4 2.2 8.4 0.6 1.9 1 1 1 2 2 2 0 Central kinetochore-associated Ribosomal_S27 PF01599.14 AJA92092.1 - 1.8e-20 72.4 6.2 2.1e-20 72.2 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a GCC2_GCC3 PF07699.8 AJA92092.1 - 0.00013 21.4 1.2 0.00017 21.1 0.8 1.2 1 0 0 1 1 1 1 GCC2 and GCC3 DZR PF12773.2 AJA92092.1 - 0.0051 16.5 0.8 0.007 16.1 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon IBR PF01485.16 AJA92092.1 - 0.0056 16.5 0.9 0.0061 16.4 0.6 1.1 1 0 0 1 1 1 1 IBR domain Nudix_N_2 PF14803.1 AJA92092.1 - 0.0057 16.3 3.7 0.94 9.2 0.1 2.2 2 0 0 2 2 2 2 Nudix N-terminal Ribosomal_L37e PF01907.14 AJA92092.1 - 0.033 13.9 3.6 0.051 13.3 2.5 1.3 1 0 0 1 1 1 0 Ribosomal protein L37e NCD3G PF07562.9 AJA92092.1 - 0.035 13.8 1.1 0.049 13.3 0.8 1.3 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR DUF1451 PF07295.6 AJA92092.1 - 0.065 12.9 0.7 0.07 12.9 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) G5 PF07501.7 AJA92092.1 - 0.08 12.8 0.1 0.098 12.6 0.1 1.1 1 0 0 1 1 1 0 G5 domain A2L_zn_ribbon PF08792.5 AJA92092.1 - 0.081 12.4 0.9 0.14 11.6 0.6 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain C1_1 PF00130.17 AJA92092.1 - 0.091 12.5 1.3 0.14 11.9 0.9 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_5 PF13719.1 AJA92092.1 - 0.12 12.0 4.0 0.94 9.1 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 AJA92092.1 - 0.13 11.7 1.4 8.7 5.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 AJA92092.1 - 0.14 11.8 1.2 0.16 11.6 0.8 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family GFA PF04828.9 AJA92092.1 - 0.31 11.0 4.0 0.43 10.5 0.2 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_4 PF13717.1 AJA92092.1 - 0.48 10.1 5.0 1.6 8.4 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA92092.1 - 0.51 9.6 4.9 1.3 8.2 3.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain YhfH PF14149.1 AJA92092.1 - 1.2 8.9 8.7 42 4.0 5.7 2.2 1 1 1 2 2 2 0 YhfH-like protein ADK_lid PF05191.9 AJA92092.1 - 1.2 8.8 6.0 0.81 9.3 0.2 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid Zn_Tnp_IS1595 PF12760.2 AJA92092.1 - 1.4 8.7 5.1 3.4 7.5 3.5 1.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C2H2_2 PF12756.2 AJA92093.1 - 0.0031 17.6 0.1 0.0032 17.5 0.0 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.7 AJA92093.1 - 0.012 15.7 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding C1_2 PF03107.11 AJA92093.1 - 0.069 13.2 0.3 0.091 12.8 0.2 1.3 1 0 0 1 1 1 0 C1 domain zf-C2H2 PF00096.21 AJA92093.1 - 0.1 12.9 0.5 0.17 12.3 0.3 1.3 1 0 0 1 1 1 0 Zinc finger, C2H2 type PfkB PF00294.19 AJA92094.1 - 1.1e-09 37.8 0.0 1.7e-09 37.2 0.0 1.4 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 AJA92094.1 - 0.055 12.6 0.0 0.083 12.0 0.0 1.3 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase NIR_SIR PF01077.17 AJA92095.1 - 1.9e-40 137.7 0.0 3e-28 98.1 0.0 2.3 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 AJA92095.1 - 1.1e-31 108.2 0.0 4e-16 58.4 0.0 2.9 2 1 1 3 3 3 2 Nitrite/Sulfite reductase ferredoxin-like half domain CobD_Cbib PF03186.8 AJA92096.1 - 3.2e-95 318.6 0.0 3.7e-95 318.3 0.0 1.0 1 0 0 1 1 1 1 CobD/Cbib protein Cys_rich_CWC PF14375.1 AJA92097.1 - 2.1e-06 27.5 10.7 2.8e-06 27.1 7.4 1.1 1 0 0 1 1 1 1 Cysteine-rich CWC DM PF00751.13 AJA92097.1 - 0.034 13.6 0.6 0.034 13.6 0.4 2.3 3 0 0 3 3 3 0 DM DNA binding domain Sprouty PF05210.8 AJA92097.1 - 0.06 13.3 4.6 0.066 13.2 3.2 1.1 1 0 0 1 1 1 0 Sprouty protein (Spry) DUF2769 PF10967.3 AJA92097.1 - 2.7 8.3 10.9 7 7.0 7.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2769) NinG PF05766.7 AJA92097.1 - 3.1 7.4 6.2 1.5 8.5 3.3 1.3 1 1 0 1 1 1 0 Bacteriophage Lambda NinG protein zf-B_box PF00643.19 AJA92097.1 - 4.4 7.2 13.4 4.9 7.1 1.0 2.1 2 0 0 2 2 2 0 B-box zinc finger FeoB_N PF02421.13 AJA92099.1 - 2.3e-15 56.2 0.1 3.6e-15 55.5 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B MMR_HSR1 PF01926.18 AJA92099.1 - 1.7e-14 53.7 0.8 2.7e-14 53.1 0.3 1.5 2 0 0 2 2 1 1 50S ribosome-binding GTPase Gate PF07670.9 AJA92099.1 - 7.5e-10 38.6 21.2 6.2e-08 32.5 1.5 3.3 3 0 0 3 3 3 2 Nucleoside recognition AIG1 PF04548.11 AJA92099.1 - 1e-06 28.0 0.5 1.9e-06 27.1 0.3 1.4 1 1 0 1 1 1 1 AIG1 family Miro PF08477.8 AJA92099.1 - 3e-05 24.4 0.3 7.4e-05 23.2 0.2 1.8 1 1 0 1 1 1 1 Miro-like protein PduV-EutP PF10662.4 AJA92099.1 - 0.0005 19.5 0.1 0.00084 18.8 0.1 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.18 AJA92099.1 - 0.00073 19.4 3.3 0.0029 17.4 0.0 2.3 1 1 1 2 2 2 1 Dynamin family SRPRB PF09439.5 AJA92099.1 - 0.027 13.6 0.1 0.053 12.7 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Arch_ATPase PF01637.13 AJA92099.1 - 0.035 13.8 0.2 0.052 13.2 0.2 1.3 1 0 0 1 1 1 0 Archaeal ATPase DUF258 PF03193.11 AJA92099.1 - 0.04 13.1 0.7 0.088 11.9 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF258 ABC_tran PF00005.22 AJA92099.1 - 0.047 13.9 0.0 0.082 13.2 0.0 1.5 1 0 0 1 1 1 0 ABC transporter Ras PF00071.17 AJA92099.1 - 0.05 12.9 0.1 0.088 12.2 0.1 1.4 1 0 0 1 1 1 0 Ras family AAA_22 PF13401.1 AJA92099.1 - 0.057 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.1 AJA92099.1 - 0.09 12.7 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Cob_adeno_trans PF01923.13 AJA92100.1 - 2.2e-57 193.3 0.0 2.5e-57 193.2 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase TFIIB PF00382.14 AJA92101.1 - 3.9e-20 71.4 1.6 4.3e-09 36.0 0.2 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 AJA92101.1 - 1.3e-05 24.4 5.2 1.3e-05 24.4 3.6 2.4 2 0 0 2 2 2 1 TFIIB zinc-binding HisG PF01634.13 AJA92101.1 - 0.02 14.4 0.1 0.063 12.8 0.0 1.8 2 1 0 2 2 2 0 ATP phosphoribosyltransferase Zn_Tnp_IS91 PF14319.1 AJA92101.1 - 0.041 13.3 4.4 0.49 9.9 0.0 2.8 3 0 0 3 3 3 0 Transposase zinc-binding domain Transketolase_N PF00456.16 AJA92102.1 - 1.5e-57 194.9 0.7 4.6e-56 190.0 0.5 2.2 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Ribul_P_3_epim PF00834.14 AJA92102.1 - 1.8e-52 177.3 0.2 2.6e-52 176.8 0.1 1.2 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family DXP_synthase_N PF13292.1 AJA92102.1 - 4.4e-06 25.8 0.1 0.0014 17.6 0.0 2.7 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.16 AJA92102.1 - 8e-05 22.2 0.0 0.00019 21.0 0.0 1.6 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.15 AJA92102.1 - 0.00011 21.0 0.0 0.00021 20.1 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component XFP_N PF09364.5 AJA92102.1 - 0.00012 20.8 0.6 0.00053 18.6 0.4 2.1 1 1 0 1 1 1 1 XFP N-terminal domain Acetyltransf_1 PF00583.19 AJA92103.1 - 8.1e-15 54.6 0.0 1.3e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 AJA92103.1 - 1.3e-08 34.9 0.2 2.2e-08 34.1 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 AJA92103.1 - 1.6e-08 34.2 0.1 1.2e-07 31.4 0.0 2.0 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_10 PF13673.1 AJA92103.1 - 4.4e-07 30.0 0.0 6.5e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 AJA92103.1 - 9.4e-05 22.3 0.0 0.00019 21.3 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 AJA92103.1 - 0.0034 17.5 0.1 0.0052 16.9 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 AJA92103.1 - 0.013 15.4 0.3 0.016 15.1 0.2 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 AJA92103.1 - 0.015 15.1 0.0 0.032 14.0 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 AJA92103.1 - 0.024 14.4 0.0 0.039 13.8 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF1743 PF08489.6 AJA92104.1 - 3.2e-35 120.4 0.0 6.6e-35 119.4 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) C1_1 PF00130.17 AJA92104.1 - 0.0082 15.8 4.8 0.015 14.9 3.3 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) PolC_DP2 PF03833.8 AJA92105.1 - 5.1e-265 881.5 0.7 2.5e-264 879.2 0.5 1.9 1 1 0 1 1 1 1 DNA polymerase II large subunit DP2 TusA PF01206.12 AJA92106.1 - 7.7e-21 73.4 0.1 8.6e-21 73.3 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 AJA92106.1 - 0.0047 16.4 0.0 0.0073 15.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) Ribosomal_L24e PF01246.15 AJA92107.1 - 8.9e-20 70.3 2.3 9.3e-20 70.2 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.9 AJA92107.1 - 0.0012 18.3 1.1 0.0022 17.6 0.8 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif DUF581 PF04570.9 AJA92107.1 - 0.0098 15.1 0.2 0.017 14.3 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF581) DUF2175 PF09943.4 AJA92107.1 - 0.014 15.4 0.4 0.016 15.2 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) zf-MYND PF01753.13 AJA92107.1 - 0.053 13.3 0.0 0.094 12.6 0.0 1.4 1 1 0 1 1 1 0 MYND finger DUF2256 PF10013.4 AJA92107.1 - 0.06 13.1 5.9 5.9 6.7 0.1 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) YHS PF04945.8 AJA92107.1 - 0.073 12.9 0.1 0.12 12.2 0.1 1.4 1 1 0 1 1 1 0 YHS domain DUF2116 PF09889.4 AJA92107.1 - 0.33 10.7 0.3 0.33 10.7 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Ribosomal_L31e PF01198.14 AJA92108.1 - 4.7e-24 83.8 0.5 8.8e-24 82.9 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L31e CTP_transf_2 PF01467.21 AJA92109.1 - 3.9e-16 59.4 0.0 4.7e-16 59.2 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 AJA92109.1 - 0.038 13.6 0.5 0.083 12.5 0.1 1.8 2 1 0 2 2 2 0 FAD synthetase UvrB PF12344.3 AJA92110.1 - 3.7e-21 74.3 4.5 3.7e-21 74.3 3.1 2.0 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.26 AJA92110.1 - 1.9e-15 56.4 0.0 7.1e-15 54.6 0.0 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 AJA92110.1 - 1.2e-08 34.9 0.2 1.2e-08 34.9 0.1 3.4 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit DEAD PF00270.24 AJA92110.1 - 7.8e-08 31.9 0.1 1.5e-05 24.5 0.0 3.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase UVR PF02151.14 AJA92110.1 - 1.7e-06 27.3 1.2 1.7e-06 27.3 0.9 2.7 2 0 0 2 2 2 1 UvrB/uvrC motif AAA_19 PF13245.1 AJA92110.1 - 0.0029 17.3 0.1 0.028 14.1 0.0 2.2 2 0 0 2 2 2 1 Part of AAA domain AAA PF00004.24 AJA92110.1 - 0.059 13.5 0.9 2.2 8.4 0.0 3.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF1816 PF08846.5 AJA92110.1 - 0.13 12.0 0.4 0.41 10.3 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) DUF393 PF04134.7 AJA92111.1 - 0.0084 17.2 0.0 0.011 16.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF393 Topo-VIb_trans PF09239.6 AJA92112.1 - 5.8e-60 201.4 0.0 9.2e-60 200.8 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 AJA92112.1 - 6.9e-10 38.6 0.0 1.5e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 AJA92112.1 - 2.4e-08 33.7 0.0 5.6e-08 32.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.6 AJA92112.1 - 0.0011 17.5 0.2 0.0026 16.3 0.0 1.6 2 0 0 2 2 2 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.17 AJA92112.1 - 0.073 13.5 0.0 2.8 8.4 0.0 2.5 2 0 0 2 2 2 0 Ribosomal protein S13/S18 Lyase_1 PF00206.15 AJA92113.1 - 3.5e-86 289.2 0.4 4.2e-86 288.9 0.3 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.4 AJA92113.1 - 8.1e-12 45.0 0.0 2.8e-11 43.2 0.0 2.0 1 0 0 1 1 1 1 Fumarase C C-terminus CaMKII_AD PF08332.5 AJA92113.1 - 0.022 14.6 0.0 3.2 7.6 0.0 3.0 3 1 0 3 3 3 0 Calcium/calmodulin dependent protein kinase II Association ToxN_toxin PF13958.1 AJA92113.1 - 0.031 13.9 1.0 0.07 12.7 0.1 2.0 2 0 0 2 2 2 0 Toxin ToxN, type III toxin-antitoxin system Chordopox_A30L PF06015.7 AJA92113.1 - 3.5 7.2 5.5 1.1 8.9 0.8 2.4 2 1 0 2 2 2 0 Chordopoxvirus A30L protein PAPS_reduct PF01507.14 AJA92114.1 - 1e-39 136.1 0.0 1.2e-39 135.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family RNA_pol_N PF01194.12 AJA92115.1 - 5.6e-07 29.4 1.8 8.5e-07 28.9 1.3 1.3 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit CmcH_NodU PF02543.10 AJA92116.1 - 2.2e-104 349.4 0.0 2.8e-104 349.0 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase Peptidase_M22 PF00814.20 AJA92116.1 - 0.00023 20.7 0.0 0.017 14.6 0.0 2.3 2 0 0 2 2 2 2 Glycoprotease family Sua5_yciO_yrdC PF01300.13 AJA92116.1 - 0.0043 16.3 0.0 0.0077 15.4 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination Pab87_oct PF13969.1 AJA92117.1 - 0.02 14.9 0.1 0.49 10.5 0.0 2.4 2 1 0 2 2 2 0 Pab87 octamerisation domain PepSY PF03413.14 AJA92118.1 - 0.023 15.3 1.0 0.19 12.4 0.7 2.2 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain His_Phos_1 PF00300.17 AJA92119.1 - 4.7e-34 117.7 0.0 5.6e-34 117.5 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Orthopox_A49R PF06489.6 AJA92120.1 - 0.22 11.4 1.6 2 8.3 0.1 2.1 2 0 0 2 2 2 0 Orthopoxvirus A49R protein Oxidored_q3 PF00499.15 AJA92121.1 - 6.2e-21 74.6 8.8 7.6e-21 74.3 6.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.1 AJA92121.1 - 0.0044 16.9 9.0 0.0044 16.9 6.2 2.1 3 0 0 3 3 3 1 Domain of unknown function (DUF4040) UPF0104 PF03706.8 AJA92121.1 - 0.64 9.2 13.7 3.8 6.6 9.1 2.1 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0104) AAA_3 PF07726.6 AJA92122.1 - 1.1e-64 215.8 0.0 2.1e-64 215.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 AJA92122.1 - 1.3e-15 57.3 0.0 2.3e-15 56.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 AJA92122.1 - 1.2e-08 34.1 0.3 3.1e-08 32.7 0.2 1.8 1 1 0 1 1 1 1 MCM2/3/5 family RuvB_N PF05496.7 AJA92122.1 - 1.8e-06 27.1 0.5 1.2e-05 24.4 0.3 2.4 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Sigma54_activat PF00158.21 AJA92122.1 - 7.7e-05 22.2 0.1 0.00068 19.1 0.1 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.16 AJA92122.1 - 0.00029 20.0 0.3 0.018 14.2 0.1 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.24 AJA92122.1 - 0.00055 20.1 0.4 0.0029 17.7 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 AJA92122.1 - 0.11 12.7 0.2 1.8 8.7 0.0 2.8 2 1 0 3 3 3 0 AAA domain HTH_20 PF12840.2 AJA92123.1 - 1.7e-05 24.5 0.0 2.6e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 AJA92123.1 - 0.00078 19.0 0.6 0.0021 17.7 0.1 2.0 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 AJA92123.1 - 0.0035 16.8 0.3 0.0041 16.6 0.2 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit DUF742 PF05331.6 AJA92123.1 - 0.0072 15.9 0.0 0.0094 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF742) DUF3839 PF12943.2 AJA92123.1 - 0.022 13.9 0.2 0.027 13.6 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3839) HTH_11 PF08279.7 AJA92123.1 - 0.061 12.9 0.1 0.13 11.9 0.1 1.7 1 1 0 1 1 1 0 HTH domain HTH_Tnp_IS630 PF01710.11 AJA92123.1 - 0.087 12.5 0.3 0.14 11.8 0.1 1.5 1 1 0 1 1 1 0 Transposase DUF3071 PF11268.3 AJA92123.1 - 0.11 12.2 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) PadR PF03551.9 AJA92123.1 - 0.14 11.9 0.1 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Mga PF05043.8 AJA92123.1 - 0.14 12.4 0.3 0.38 11.0 0.1 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain Ribosomal_S19 PF00203.16 AJA92124.1 - 1.6e-24 85.2 0.3 2.3e-24 84.7 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Peptidase_M56 PF05569.6 AJA92124.1 - 0.15 11.0 0.1 0.18 10.7 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 tRNA-synt_1d PF00750.14 AJA92125.1 - 2.1e-36 125.5 7.0 2.3e-25 89.1 3.1 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.10 AJA92125.1 - 6.5e-31 106.7 0.5 3.8e-29 101.0 0.0 2.4 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 AJA92125.1 - 8.6e-15 55.0 0.1 3e-14 53.3 0.0 2.0 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.13 AJA92125.1 - 0.0033 16.1 0.2 0.014 14.0 0.1 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 AJA92125.1 - 0.0052 15.9 0.9 0.014 14.4 0.6 1.8 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 AJA92125.1 - 0.017 13.7 2.7 0.16 10.5 0.0 2.5 2 0 0 2 2 2 0 tRNA synthetases class I (M) DUF3275 PF11679.3 AJA92125.1 - 0.071 12.7 0.1 0.16 11.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) PMSR PF01625.16 AJA92126.1 - 2.7e-63 212.5 4.7 3e-63 212.3 3.3 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase HMA PF00403.21 AJA92126.1 - 0.11 12.6 0.2 1.2 9.3 0.0 2.4 3 0 0 3 3 3 0 Heavy-metal-associated domain Glycos_transf_2 PF00535.21 AJA92127.1 - 1.3e-30 106.2 0.0 1.8e-30 105.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 AJA92127.1 - 1.4e-18 67.5 0.0 2e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 AJA92127.1 - 1.4e-12 47.2 0.0 2.1e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 AJA92127.1 - 4.2e-11 42.4 0.4 5.8e-11 42.0 0.3 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 AJA92127.1 - 0.00017 21.8 0.0 0.00028 21.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.1 AJA92127.1 - 0.0063 16.2 0.0 0.016 14.9 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Sarcolipin PF05366.6 AJA92127.1 - 4.6 6.7 6.7 1.5 8.3 1.8 2.2 2 0 0 2 2 2 0 Sarcolipin HIT PF01230.18 AJA92128.1 - 2.3e-24 85.7 1.1 2.8e-24 85.4 0.7 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 AJA92128.1 - 7.7e-15 55.1 1.0 1e-14 54.7 0.7 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 AJA92128.1 - 0.0021 17.7 0.2 0.0026 17.4 0.1 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 COX14 PF14880.1 AJA92129.1 - 0.0028 17.2 0.5 0.0041 16.7 0.4 1.2 1 0 0 1 1 1 1 Cytochrome oxidase c assembly Tox-WTIP PF15654.1 AJA92129.1 - 0.033 13.7 0.2 0.033 13.7 0.2 1.6 2 0 0 2 2 2 0 Toxin with a conserved tryptophan and TIP tripeptide motif DHHA1 PF02272.14 AJA92130.1 - 2.1e-11 43.3 0.1 5.6e-11 41.9 0.1 1.8 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 AJA92130.1 - 5.8e-05 22.7 2.3 0.00028 20.5 1.0 2.3 2 1 0 2 2 2 1 DHH family Ribosomal_L7Ae PF01248.21 AJA92131.1 - 2.1e-25 88.0 0.1 2.6e-25 87.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family His_biosynth PF00977.16 AJA92131.1 - 0.075 12.2 0.1 0.099 11.8 0.0 1.3 1 1 0 1 1 1 0 Histidine biosynthesis protein DUF3055 PF11256.3 AJA92131.1 - 0.092 12.8 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3055) Prok-JAB PF14464.1 AJA92133.1 - 1.5e-20 72.6 0.0 1.9e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 AJA92133.1 - 3.3e-08 33.2 0.1 6e-08 32.4 0.1 1.4 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Toxin-JAB1 PF15659.1 AJA92133.1 - 0.00036 20.4 0.7 0.00066 19.5 0.5 1.6 1 1 0 1 1 1 1 JAB-like toxin 1 RadC PF04002.10 AJA92133.1 - 0.0025 17.4 0.2 0.0051 16.4 0.1 1.7 1 1 0 1 1 1 1 RadC-like JAB domain PhoU_div PF01865.11 AJA92134.1 - 4.7e-22 78.2 8.3 5.8e-22 77.9 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 AJA92134.1 - 0.027 14.9 7.5 0.73 10.3 0.5 2.5 2 1 0 2 2 2 0 PhoU domain Terpene_synth PF01397.16 AJA92134.1 - 0.027 13.8 0.1 0.06 12.7 0.0 1.6 1 0 0 1 1 1 0 Terpene synthase, N-terminal domain YmgB PF10798.3 AJA92134.1 - 0.058 13.2 2.3 0.063 13.0 0.2 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR PUA PF01472.15 AJA92135.1 - 8e-18 63.9 0.0 1.4e-17 63.1 0.0 1.4 1 0 0 1 1 1 1 PUA domain SH3_1 PF00018.23 AJA92135.1 - 3 7.3 6.6 20 4.6 0.3 3.3 3 0 0 3 3 3 0 SH3 domain CbiG_N PF11760.3 AJA92136.1 - 1.9e-32 110.7 0.3 3.4e-32 109.9 0.2 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.11 AJA92136.1 - 5.3e-30 104.1 0.1 2.5e-29 101.9 0.0 1.9 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.3 AJA92136.1 - 1.6e-10 41.0 0.0 3.3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Cobalamin biosynthesis central region SpoU_sub_bind PF08032.7 AJA92136.1 - 0.024 14.8 0.2 0.16 12.1 0.0 2.4 3 0 0 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding FAD_binding_2 PF00890.19 AJA92138.1 - 3.1e-05 23.0 0.0 0.0054 15.6 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.19 AJA92138.1 - 0.00018 20.5 0.1 0.0069 15.3 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 AJA92138.1 - 0.0011 18.0 0.6 1 8.3 0.0 2.5 2 1 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.7 AJA92138.1 - 0.0048 15.8 0.0 0.011 14.6 0.0 1.7 1 1 0 1 1 1 1 Lycopene cyclase protein GDI PF00996.13 AJA92138.1 - 0.012 14.0 0.0 0.028 12.7 0.0 1.6 1 0 0 1 1 1 0 GDP dissociation inhibitor Trp_halogenase PF04820.9 AJA92138.1 - 0.019 13.6 0.0 0.21 10.1 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase FAD_oxidored PF12831.2 AJA92138.1 - 1.4 7.8 3.7 9.8 5.1 2.5 2.2 1 1 0 1 1 1 0 FAD dependent oxidoreductase GCC2_GCC3 PF07699.8 AJA92139.1 - 0.00029 20.3 6.3 0.00029 20.3 4.4 1.3 1 1 0 1 1 1 1 GCC2 and GCC3 Fer4_2 PF12797.2 AJA92139.1 - 7.3 6.7 12.9 2.8 8.0 0.2 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Latrotoxin_C PF15658.1 AJA92140.1 - 0.042 13.6 1.4 0.05 13.4 0.9 1.4 1 1 0 1 1 1 0 Latrotoxin C-terminal domain AIRC PF00731.15 AJA92141.1 - 8.8e-57 190.6 0.3 1.2e-56 190.1 0.2 1.2 1 0 0 1 1 1 1 AIR carboxylase Tospo_nucleocap PF01533.11 AJA92141.1 - 0.03 13.5 0.1 0.044 13.0 0.1 1.2 1 0 0 1 1 1 0 Tospovirus nucleocapsid protein PrpR_N PF06506.6 AJA92141.1 - 0.071 12.5 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Propionate catabolism activator DUF521 PF04412.8 AJA92142.1 - 1.6e-104 349.6 0.0 1.9e-104 349.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF521) TPR_11 PF13414.1 AJA92143.1 - 5e-16 58.0 0.4 4.1e-07 29.5 0.0 2.4 1 1 2 3 3 3 3 TPR repeat TPR_12 PF13424.1 AJA92143.1 - 7.9e-12 44.9 0.1 2e-06 27.6 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92143.1 - 1.3e-11 44.6 0.5 8.7e-07 29.1 0.1 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.23 AJA92143.1 - 2.7e-11 42.5 0.2 0.0014 18.0 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92143.1 - 1.9e-10 39.8 0.0 0.015 15.2 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92143.1 - 9.8e-09 34.3 4.0 0.0026 17.3 0.0 3.8 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92143.1 - 2e-08 34.1 0.0 0.015 15.8 0.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92143.1 - 5.7e-08 32.5 0.0 0.16 11.8 0.0 3.3 2 1 1 3 3 3 3 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.1 AJA92143.1 - 1.1e-06 28.3 0.4 0.074 13.2 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.1 AJA92143.1 - 1.4e-06 28.0 0.0 0.0068 16.2 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92143.1 - 9.3e-05 22.9 0.0 0.0094 16.5 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat Apc3 PF12895.2 AJA92143.1 - 0.0018 18.3 0.1 0.0074 16.4 0.1 2.1 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 AJA92143.1 - 0.005 15.6 0.1 0.2 10.3 0.0 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 Alkyl_sulf_dimr PF14863.1 AJA92143.1 - 0.0079 16.4 0.1 4 7.6 0.0 2.5 1 1 1 2 2 2 1 Alkyl sulfatase dimerisation Peptidase_C39 PF03412.10 AJA92143.1 - 0.015 15.1 0.2 0.044 13.6 0.0 1.8 1 1 1 2 2 2 0 Peptidase C39 family TPR_6 PF13174.1 AJA92143.1 - 0.047 14.1 0.0 21 5.8 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Orthopox_F6 PF06601.7 AJA92143.1 - 0.064 13.1 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 Orthopoxvirus F6 protein Bac_luciferase PF00296.15 AJA92145.1 - 3.8e-56 190.4 0.0 4.7e-56 190.1 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase SGL PF08450.7 AJA92146.1 - 0.00011 21.6 3.0 2.7 7.2 0.0 4.5 4 2 0 4 4 4 2 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 AJA92146.1 - 0.0016 18.2 0.1 0.37 10.8 0.0 3.0 3 0 0 3 3 3 1 NHL repeat FliD_N PF02465.13 AJA92146.1 - 0.029 14.7 1.5 0.061 13.6 1.0 1.5 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Reg_prop PF07494.6 AJA92146.1 - 0.035 14.0 5.8 16 5.9 0.1 4.7 4 0 0 4 4 4 0 Two component regulator propeller tRNA-synt_2b PF00587.20 AJA92148.1 - 1.6e-38 131.9 1.1 2.5e-38 131.3 0.1 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 AJA92148.1 - 6.2e-24 84.0 8.1 6.2e-24 84.0 5.6 1.8 2 0 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain DUF1024 PF06260.7 AJA92148.1 - 0.47 10.6 3.2 0.6 10.2 0.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF1024) Syntaxin-6_N PF09177.6 AJA92148.1 - 0.5 10.7 5.0 0.32 11.4 0.3 2.7 3 0 0 3 3 3 0 Syntaxin 6, N-terminal APG6 PF04111.7 AJA92148.1 - 4.2 6.3 10.3 15 4.5 2.0 3.2 4 0 0 4 4 4 0 Autophagy protein Apg6 BLOC1_2 PF10046.4 AJA92148.1 - 8.4 6.6 11.0 0.19 11.8 2.5 2.1 3 0 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA_15 PF13175.1 AJA92149.1 - 8.6e-23 81.0 3.2 8.6e-23 81.0 2.2 2.8 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.1 AJA92149.1 - 4.3e-14 53.1 25.3 6.4e-14 52.6 8.1 3.8 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.1 AJA92149.1 - 0.0055 16.1 0.0 0.015 14.8 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 AJA92149.1 - 0.0064 16.6 0.8 0.84 9.7 0.0 3.6 3 1 0 3 3 3 1 AAA domain ABC_tran PF00005.22 AJA92149.1 - 0.0089 16.3 0.1 0.0089 16.3 0.1 2.8 3 1 0 3 3 3 1 ABC transporter MMR_HSR1 PF01926.18 AJA92149.1 - 0.035 14.0 0.0 0.15 12.0 0.0 2.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase SMC_N PF02463.14 AJA92149.1 - 0.04 13.1 0.0 5.8 6.0 0.0 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 AJA92149.1 - 0.62 10.3 23.6 0.015 15.6 6.9 3.1 2 1 0 2 2 2 0 AAA domain Tox-GHH PF15636.1 AJA92150.1 - 0.0066 16.0 0.4 1 9.0 0.0 2.3 2 0 0 2 2 2 2 GHH signature containing HNH/Endo VII superfamily nuclease toxin DUF3980 PF13140.1 AJA92150.1 - 0.049 13.9 0.6 0.27 11.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) Etmic-2 PF06670.6 AJA92152.1 - 0.94 8.1 6.9 1.3 7.6 4.8 1.1 1 0 0 1 1 1 0 Microneme protein Etmic-2 DUF4613 PF15390.1 AJA92152.1 - 1.1 7.4 13.2 1.2 7.2 9.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4613) Allexi_40kDa PF05549.6 AJA92152.1 - 2.3 7.4 6.0 2.8 7.1 4.1 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF342 PF03961.8 AJA92152.1 - 4.4 5.5 14.1 5.9 5.1 9.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF342) GAGA_bind PF06217.7 AJA92152.1 - 5.5 6.8 18.4 7.1 6.4 12.7 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family Corona_nucleoca PF00937.13 AJA92152.1 - 5.7 5.7 16.4 7 5.4 11.3 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Methyltransf_23 PF13489.1 AJA92153.1 - 0.025 14.2 0.0 0.13 12.0 0.0 2.1 2 1 0 2 2 2 0 Methyltransferase domain Creatininase PF02633.9 AJA92154.1 - 4.6e-56 189.5 0.0 5.2e-56 189.3 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DUF4473 PF14747.1 AJA92154.1 - 0.046 13.9 0.1 0.12 12.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) GATase_5 PF13507.1 AJA92155.1 - 8.1e-43 146.1 0.0 1.6e-42 145.2 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 AJA92155.1 - 6.2e-09 35.5 0.0 9.4e-09 34.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 AJA92155.1 - 1.5e-08 34.4 0.0 7.7e-08 32.0 0.0 2.0 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DUF4066 PF13278.1 AJA92155.1 - 7.8e-06 25.2 0.0 1.2e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Putative amidotransferase DJ-1_PfpI PF01965.19 AJA92155.1 - 4.2e-05 23.0 0.0 5.9e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.8 AJA92155.1 - 0.0099 15.3 0.3 0.035 13.5 0.1 2.0 2 1 0 2 2 2 1 Peptidase C26 CheX PF13690.1 AJA92155.1 - 0.017 14.9 0.1 0.19 11.6 0.0 2.2 2 0 0 2 2 2 0 Chemotaxis phosphatase CheX PadR PF03551.9 AJA92156.1 - 0.071 12.8 0.3 0.086 12.6 0.2 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Cytidylate_kin PF02224.13 AJA92156.1 - 0.093 12.1 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Cytidylate kinase SHQ1 PF04925.10 AJA92157.1 - 0.007 15.8 0.5 0.007 15.8 0.3 1.8 2 0 0 2 2 2 1 SHQ1 protein CBFD_NFYB_HMF PF00808.18 AJA92158.1 - 8.7e-12 44.9 0.2 1e-11 44.7 0.1 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 AJA92158.1 - 4.4e-09 36.3 0.1 4.9e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 AJA92158.1 - 4.6e-05 23.5 0.1 7.6e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 Kinetochore component CENP-S TFIID-31kDa PF02291.10 AJA92158.1 - 0.0016 18.2 0.0 0.0018 18.0 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.8 AJA92158.1 - 0.0094 15.6 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TAF PF02969.12 AJA92158.1 - 0.026 14.4 0.4 0.033 14.1 0.3 1.2 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.11 AJA92158.1 - 0.026 14.3 0.0 0.028 14.2 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit TFIID_20kDa PF03847.8 AJA92158.1 - 0.1 12.9 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Helicase_C PF00271.26 AJA92159.1 - 1.2e-11 44.3 0.0 3.2e-11 42.9 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 AJA92159.1 - 1.7e-08 34.1 0.0 7.2e-05 22.3 0.0 3.0 3 0 0 3 3 3 2 DEAD/DEAH box helicase OrfB_Zn_ribbon PF07282.6 AJA92159.1 - 0.016 14.8 0.6 0.016 14.8 0.4 3.0 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DZR PF12773.2 AJA92159.1 - 0.095 12.5 7.0 0.19 11.5 0.8 2.5 2 0 0 2 2 2 0 Double zinc ribbon zf-LITAF-like PF10601.4 AJA92159.1 - 0.42 10.4 3.8 0.31 10.9 0.4 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DUF2387 PF09526.5 AJA92159.1 - 0.72 9.8 7.2 4.4 7.2 0.6 2.7 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) Zn_Tnp_IS1595 PF12760.2 AJA92159.1 - 2.7 7.8 10.0 1.1 9.1 0.4 3.1 2 1 1 3 3 3 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.1 AJA92159.1 - 3.1 8.1 6.8 9.4 6.6 0.7 2.5 2 0 0 2 2 2 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 AJA92159.1 - 6.5 6.7 13.3 9.9 6.2 0.9 3.1 2 1 1 3 3 3 0 Zinc ribbon domain zf-TFIIB PF13453.1 AJA92159.1 - 8.3 5.6 13.7 0.48 9.6 1.5 3.0 2 1 0 2 2 2 0 Transcription factor zinc-finger zf-C4_Topoisom PF01396.14 AJA92159.1 - 9.7 5.7 8.9 10 5.7 0.4 2.9 2 1 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Cys_rich_CPCC PF14206.1 AJA92160.1 - 0.11 12.0 2.5 0.16 11.5 0.2 2.2 2 0 0 2 2 2 0 Cysteine-rich CPCC Pyr_redox_3 PF13738.1 AJA92161.1 - 9.9e-47 159.6 0.0 9.2e-46 156.4 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.1 AJA92161.1 - 5.6e-11 41.9 0.1 8.8e-09 34.7 0.0 2.2 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 AJA92161.1 - 1.2e-10 40.8 0.0 0.014 14.2 0.0 4.1 4 0 0 4 4 4 3 FAD dependent oxidoreductase HI0933_like PF03486.9 AJA92161.1 - 2.2e-10 39.5 0.1 0.048 12.1 0.0 4.0 5 0 0 5 5 5 3 HI0933-like protein Pyr_redox PF00070.22 AJA92161.1 - 5.6e-10 39.4 2.9 0.0075 16.6 0.2 4.1 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.9 AJA92161.1 - 2e-07 31.1 0.0 3.5e-06 27.0 0.0 2.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 AJA92161.1 - 1.3e-06 28.2 0.1 0.011 15.4 0.1 3.2 2 2 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.1 AJA92161.1 - 1.8e-05 24.6 0.6 0.052 13.5 0.0 2.7 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 AJA92161.1 - 2.6e-05 23.2 0.2 1.5 7.6 0.0 3.9 3 1 1 4 4 4 2 Glucose inhibited division protein A FAD_binding_3 PF01494.14 AJA92161.1 - 6.5e-05 22.1 0.1 0.0022 17.1 0.2 2.6 3 0 0 3 3 3 1 FAD binding domain Thi4 PF01946.12 AJA92161.1 - 7.5e-05 21.9 0.3 0.037 13.1 0.1 2.3 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.19 AJA92161.1 - 0.0015 17.4 0.0 6.5 5.4 0.0 3.3 4 0 0 4 4 4 2 FAD binding domain Chorismate_synt PF01264.16 AJA92162.1 - 1.9e-137 457.4 0.4 2.1e-137 457.2 0.3 1.0 1 0 0 1 1 1 1 Chorismate synthase BCIP PF13862.1 AJA92162.1 - 0.084 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 p21-C-terminal region-binding protein dsDNA_bind PF01984.15 AJA92163.1 - 1.3e-22 79.8 0.4 1.4e-22 79.6 0.3 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF4503 PF14951.1 AJA92164.1 - 0.00045 18.4 0.4 0.00045 18.4 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4503) Zn-ribbon_8 PF09723.5 AJA92164.1 - 0.0017 18.2 2.0 0.018 14.9 0.4 2.1 2 0 0 2 2 2 1 Zinc ribbon domain zinc_ribbon_5 PF13719.1 AJA92164.1 - 0.0019 17.7 4.0 0.027 14.0 2.8 2.1 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 AJA92164.1 - 0.0036 16.9 4.1 0.051 13.2 2.8 2.1 1 1 0 1 1 1 1 zinc-ribbon domain Lar_restr_allev PF14354.1 AJA92164.1 - 0.0038 17.5 1.7 0.0038 17.5 1.2 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.2 AJA92164.1 - 0.0091 15.7 3.4 0.014 15.2 2.3 1.4 1 1 0 1 1 1 1 Transposase zinc-ribbon domain zf-BED PF02892.10 AJA92164.1 - 0.027 14.2 0.2 0.027 14.2 0.2 1.4 1 1 0 1 1 1 0 BED zinc finger DZR PF12773.2 AJA92164.1 - 0.054 13.3 3.0 0.094 12.5 2.1 1.5 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 AJA92164.1 - 0.058 12.7 3.4 0.096 12.0 2.4 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding TFIIS_C PF01096.13 AJA92164.1 - 0.074 12.7 2.0 3.8 7.2 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) OrfB_Zn_ribbon PF07282.6 AJA92164.1 - 0.081 12.5 1.6 0.083 12.5 1.1 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HypA PF01155.14 AJA92164.1 - 0.098 12.3 1.7 0.19 11.4 1.3 1.5 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF1451 PF07295.6 AJA92164.1 - 0.1 12.3 1.2 0.14 11.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) zf-ribbon_3 PF13248.1 AJA92164.1 - 0.22 10.7 6.2 0.92 8.7 0.9 2.6 2 1 0 2 2 2 0 zinc-ribbon domain DUF3039 PF11238.3 AJA92164.1 - 0.31 10.5 2.5 0.56 9.6 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) DNA_ligase_ZBD PF03119.11 AJA92164.1 - 0.54 10.0 7.9 2.4 7.9 5.4 2.2 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Auto_anti-p27 PF06677.7 AJA92164.1 - 0.89 9.3 5.9 1.9 8.3 4.1 1.7 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF2072 PF09845.4 AJA92164.1 - 0.96 9.3 3.8 0.53 10.2 0.2 1.9 1 1 1 2 2 2 0 Zn-ribbon containing protein (DUF2072) RRN7 PF11781.3 AJA92164.1 - 1 8.9 3.5 2.6 7.6 2.5 1.7 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zinc_ribbon_2 PF13240.1 AJA92164.1 - 1.2 8.7 4.6 3.5 7.2 1.9 2.4 2 1 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.6 AJA92164.1 - 2.9 7.4 5.5 7.3 6.2 1.9 2.4 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Sgf11 PF08209.6 AJA92164.1 - 4.1 6.8 5.8 2.1 7.7 0.1 2.2 2 1 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-ISL3 PF14690.1 AJA92164.1 - 5.4 7.1 6.6 18 5.4 4.6 1.9 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-RING_3 PF14369.1 AJA92164.1 - 7.8 6.5 6.3 5.1 7.1 1.7 2.2 1 1 1 2 2 2 0 zinc-finger GlutR_N PF05201.10 AJA92166.1 - 3.3e-31 107.9 0.0 4.9e-31 107.3 0.0 1.3 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 AJA92166.1 - 5.2e-14 52.4 0.1 1e-13 51.5 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 AJA92166.1 - 0.015 15.4 0.1 0.039 14.2 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF498 PF04430.9 AJA92166.1 - 0.066 12.7 0.3 4.1 7.0 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF498/DUF598) DUF2639 PF11121.3 AJA92167.1 - 0.014 14.8 0.1 0.023 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) DUF4419 PF14388.1 AJA92167.1 - 0.041 13.0 0.1 0.066 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) DUF373 PF04123.8 AJA92168.1 - 4.1e-107 358.1 10.3 4.8e-107 357.9 7.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DUF4231 PF14015.1 AJA92168.1 - 0.046 13.6 9.0 0.053 13.4 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SPC12 PF06645.8 AJA92168.1 - 0.11 12.3 0.2 0.43 10.4 0.2 2.0 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Aminotran_4 PF01063.14 AJA92169.1 - 2.4e-41 141.7 0.0 2.9e-41 141.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class IV Hemerythrin PF01814.18 AJA92170.1 - 6.6e-10 39.2 0.7 1.6e-09 38.0 0.1 1.7 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain BLOC1_2 PF10046.4 AJA92170.1 - 0.016 15.3 1.2 0.056 13.5 0.4 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PSCyt2 PF07583.6 AJA92170.1 - 0.097 12.1 0.5 1.1 8.7 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1549) Hexose_dehydrat PF03559.9 AJA92171.1 - 7.5e-65 217.8 0.0 8.8e-65 217.5 0.0 1.0 1 0 0 1 1 1 1 NDP-hexose 2,3-dehydratase Helicase_C PF00271.26 AJA92172.1 - 2.3e-20 72.2 0.2 6.6e-20 70.7 0.1 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 AJA92172.1 - 3.1e-20 72.3 0.5 7.8e-19 67.7 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 AJA92172.1 - 7.4e-18 65.0 0.0 2.8e-17 63.1 0.0 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.9 AJA92172.1 - 0.00014 21.6 0.0 0.00067 19.4 0.0 2.1 2 0 0 2 2 2 1 Flavivirus DEAD domain AAA_19 PF13245.1 AJA92172.1 - 0.00016 21.3 0.1 0.0011 18.6 0.0 2.2 2 0 0 2 2 2 1 Part of AAA domain Helicase_C_2 PF13307.1 AJA92172.1 - 0.00027 20.9 0.0 0.013 15.5 0.0 2.4 2 0 0 2 2 2 1 Helicase C-terminal domain DUF2075 PF09848.4 AJA92172.1 - 0.0029 16.6 0.0 0.0048 15.9 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) SNF2_N PF00176.18 AJA92172.1 - 0.0071 15.1 0.3 0.013 14.2 0.0 1.5 2 0 0 2 2 2 1 SNF2 family N-terminal domain AAA_11 PF13086.1 AJA92172.1 - 0.023 14.3 0.5 6.4 6.2 0.0 2.5 1 1 0 2 2 2 0 AAA domain AAA_25 PF13481.1 AJA92172.1 - 0.031 13.6 0.2 0.099 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain SRP1_TIP1 PF00660.12 AJA92172.1 - 0.097 12.5 0.1 0.72 9.6 0.0 2.2 2 0 0 2 2 2 0 Seripauperin and TIP1 family TPR_11 PF13414.1 AJA92173.1 - 1.2e-19 69.6 1.4 1.7e-09 37.1 0.0 3.3 2 1 1 3 3 3 3 TPR repeat TPR_2 PF07719.12 AJA92173.1 - 1.8e-14 52.3 2.1 4.1e-06 26.2 0.0 5.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92173.1 - 8.2e-14 51.6 0.0 4.1e-05 23.8 0.0 3.1 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92173.1 - 1.9e-13 50.6 0.0 1.1e-05 25.9 0.0 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.23 AJA92173.1 - 2.5e-12 45.8 4.8 3.4e-08 32.7 0.2 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92173.1 - 2.5e-10 39.7 2.6 0.034 14.3 0.1 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92173.1 - 2.7e-10 40.0 0.2 1.3 9.6 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92173.1 - 1.1e-08 34.9 0.2 0.0048 16.8 0.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92173.1 - 1.2e-08 34.8 0.0 1 10.2 0.0 4.4 1 1 4 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92173.1 - 6.1e-08 32.4 0.4 0.024 14.4 0.0 4.0 4 0 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat Apc3 PF12895.2 AJA92173.1 - 1.3e-07 31.6 2.1 1.7e-05 24.8 0.1 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 AJA92173.1 - 2.1e-05 23.4 0.5 0.0055 15.5 0.1 2.1 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_8 PF13181.1 AJA92173.1 - 0.00073 19.1 15.1 0.0023 17.6 0.3 4.9 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.1 AJA92173.1 - 0.0032 17.1 0.0 3 7.8 0.0 3.8 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.1 AJA92173.1 - 0.007 16.1 0.0 0.044 13.6 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.9 AJA92173.1 - 0.01 15.0 1.0 0.3 10.2 0.0 2.0 1 1 0 2 2 2 0 Coatomer epsilon subunit USP8_dimer PF08969.6 AJA92173.1 - 0.71 9.8 4.6 0.31 11.0 0.4 2.3 2 2 0 2 2 2 0 USP8 dimerisation domain OMPdecase PF00215.19 AJA92174.1 - 1.4e-24 86.7 0.0 1.7e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family TP_methylase PF00590.15 AJA92175.1 - 3e-48 164.3 0.0 3.4e-48 164.1 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases tRNA_deacylase PF04414.7 AJA92176.1 - 4.6e-63 212.1 0.0 7.1e-63 211.5 0.0 1.3 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Toprim_2 PF13155.1 AJA92176.1 - 0.11 12.7 0.2 0.35 11.2 0.1 1.8 1 0 0 1 1 1 0 Toprim-like SRP54 PF00448.17 AJA92177.1 - 8.7e-70 234.1 2.0 1.2e-69 233.6 1.4 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 AJA92177.1 - 3.3e-10 39.9 5.7 9.3e-10 38.4 4.0 1.7 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.1 AJA92177.1 - 5.5e-07 29.3 0.1 8e-07 28.8 0.1 1.2 1 0 0 1 1 1 1 AAA domain cobW PF02492.14 AJA92177.1 - 2.4e-06 27.0 0.7 4.1e-06 26.3 0.5 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.1 AJA92177.1 - 1.3e-05 25.3 0.0 3.4e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 AJA92177.1 - 4.9e-05 22.5 0.2 8.4e-05 21.7 0.1 1.3 1 0 0 1 1 1 1 Zeta toxin MobB PF03205.9 AJA92177.1 - 6.1e-05 22.7 0.6 0.00027 20.6 0.1 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 AJA92177.1 - 0.0008 19.3 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain B12-binding PF02310.14 AJA92177.1 - 0.0018 18.1 1.0 0.0077 16.0 0.7 2.0 1 1 1 2 2 2 1 B12 binding domain PIF1 PF05970.9 AJA92177.1 - 0.0061 15.5 0.2 0.0095 14.9 0.1 1.2 1 0 0 1 1 1 1 PIF1-like helicase CbiA PF01656.18 AJA92177.1 - 0.0087 15.4 0.8 0.022 14.1 0.5 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.10 AJA92177.1 - 0.012 15.3 0.9 0.26 11.0 0.1 2.4 1 1 0 2 2 2 0 NTPase AAA PF00004.24 AJA92177.1 - 0.012 15.7 0.2 0.036 14.2 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 AJA92177.1 - 0.014 15.1 1.1 0.051 13.2 0.1 2.2 1 1 1 2 2 2 0 Archaeal ATPase AAA_16 PF13191.1 AJA92177.1 - 0.014 15.3 0.0 0.027 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 AJA92177.1 - 0.015 15.5 0.2 0.043 14.1 0.1 1.7 1 1 0 1 1 1 0 ABC transporter AAA_19 PF13245.1 AJA92177.1 - 0.016 14.9 0.1 0.037 13.7 0.1 1.5 1 1 0 1 1 1 0 Part of AAA domain DUF2075 PF09848.4 AJA92177.1 - 0.026 13.5 0.1 0.041 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.17 AJA92177.1 - 0.026 13.3 0.0 0.045 12.6 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain TPP_enzyme_M PF00205.17 AJA92177.1 - 0.027 14.2 0.2 0.41 10.3 0.1 2.6 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain Thymidylate_kin PF02223.12 AJA92177.1 - 0.029 13.7 0.0 0.11 11.8 0.0 2.0 2 0 0 2 2 2 0 Thymidylate kinase 6PF2K PF01591.13 AJA92177.1 - 0.029 13.4 0.3 0.075 12.0 0.0 1.8 2 0 0 2 2 2 0 6-phosphofructo-2-kinase AAA_28 PF13521.1 AJA92177.1 - 0.029 14.3 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.15 AJA92177.1 - 0.044 13.4 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_14 PF13173.1 AJA92177.1 - 0.055 13.3 0.0 0.14 12.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATP-cone PF03477.11 AJA92177.1 - 0.066 13.6 0.9 0.97 9.9 0.4 2.7 2 0 0 2 2 2 0 ATP cone domain ArgK PF03308.11 AJA92177.1 - 0.1 11.3 0.8 0.38 9.5 0.2 2.2 2 1 0 2 2 2 0 ArgK protein Miro PF08477.8 AJA92177.1 - 0.12 12.9 1.6 1.7 9.1 0.1 2.4 1 1 1 2 2 2 0 Miro-like protein AAA_17 PF13207.1 AJA92177.1 - 0.15 12.9 1.6 0.29 11.9 0.0 2.2 3 1 0 3 3 1 0 AAA domain Response_reg PF00072.19 AJA92177.1 - 0.17 11.9 1.3 1.2 9.2 0.1 2.8 2 1 1 3 3 3 0 Response regulator receiver domain Trypan_PARP PF05887.6 AJA92177.1 - 8 6.2 103.0 1.5e+04 -25.1 70.7 2.8 1 1 0 1 1 0 0 Procyclic acidic repetitive protein (PARP) FlgD_ig PF13860.1 AJA92178.1 - 0.0024 17.5 0.0 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 FlgD Ig-like domain Methyltransf_11 PF08241.7 AJA92179.1 - 2.9e-08 34.0 0.0 5.2e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 AJA92179.1 - 2.4e-05 23.5 0.0 4.6e-05 22.6 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.1 AJA92179.1 - 0.00021 21.0 0.0 0.00044 20.0 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.10 AJA92179.1 - 0.00093 18.8 0.0 0.0026 17.4 0.0 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_12 PF08242.7 AJA92179.1 - 0.03 14.8 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF192 PF02643.10 AJA92180.1 - 6.6e-28 96.5 0.0 8.8e-28 96.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Ph1570 PF09638.5 AJA92180.1 - 0.059 13.1 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Ph1570 protein Snf7 PF03357.16 AJA92181.1 - 0.017 14.5 12.2 0.031 13.6 8.4 1.4 1 1 0 1 1 1 0 Snf7 DUF3552 PF12072.3 AJA92181.1 - 0.057 12.6 6.9 2.8 7.0 3.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DUF1062 PF06353.7 AJA92181.1 - 0.15 12.2 2.0 0.84 9.8 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1062) IFN-gamma PF00714.12 AJA92181.1 - 0.34 10.7 3.3 0.58 9.9 1.6 1.9 1 1 1 2 2 2 0 Interferon gamma CENP-H PF05837.7 AJA92181.1 - 1.9 8.7 7.3 4.6 7.4 5.1 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) LSM PF01423.17 AJA92183.1 - 5.8e-16 57.8 2.0 6.5e-16 57.6 1.4 1.0 1 0 0 1 1 1 1 LSM domain Gemin7 PF11095.3 AJA92183.1 - 0.0035 17.0 0.0 0.0049 16.5 0.0 1.2 1 1 0 1 1 1 1 Gem-associated protein 7 (Gemin7) Tim44 PF04280.10 AJA92183.1 - 0.043 13.8 0.1 0.043 13.7 0.1 1.0 1 0 0 1 1 1 0 Tim44-like domain SMC_Nse1 PF07574.8 AJA92183.1 - 0.1 12.2 0.1 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex HisG PF01634.13 AJA92184.1 - 9.7e-38 129.3 0.1 1.3e-37 128.8 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 AJA92184.1 - 1.3e-14 53.8 0.0 2.9e-14 52.7 0.0 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain PTCB-BRCT PF12738.2 AJA92184.1 - 0.058 13.2 0.1 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 twin BRCT domain Big_3_4 PF13754.1 AJA92185.1 - 0.0029 17.8 1.8 0.12 12.7 0.0 3.2 2 1 1 3 3 3 1 Bacterial Ig-like domain (group 3) DUF3244 PF11589.3 AJA92185.1 - 0.0037 16.9 2.3 0.61 9.8 0.2 2.9 2 1 0 2 2 2 2 Domain of unknown function (DUF3244) SWM_repeat PF13753.1 AJA92185.1 - 0.0081 15.2 1.6 0.0081 15.2 1.1 2.6 2 1 1 3 3 3 1 Putative flagellar system-associated repeat F420_ligase PF01996.11 AJA92186.1 - 7.7e-52 175.6 0.1 8.6e-52 175.4 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Ribosomal_L14 PF00238.14 AJA92187.1 - 1.6e-34 118.2 0.6 1.8e-34 118.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L32e PF01655.13 AJA92188.1 - 2.3e-34 117.7 0.2 2.8e-34 117.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Romo1 PF10247.4 AJA92189.1 - 0.0033 17.5 3.9 0.01 16.0 2.7 1.8 1 0 0 1 1 1 1 Reactive mitochondrial oxygen species modulator 1 PIRT PF15099.1 AJA92189.1 - 0.05 12.8 0.5 0.05 12.8 0.3 2.7 2 1 1 3 3 3 0 Phosphoinositide-interacting protein family DUF2878 PF11086.3 AJA92189.1 - 0.15 12.0 8.7 0.18 11.8 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2878) AA_permease_C PF13906.1 AJA92189.1 - 0.19 11.6 0.4 0.19 11.6 0.3 2.8 3 0 0 3 3 3 0 C-terminus of AA_permease DctQ PF04290.7 AJA92189.1 - 5.5 6.7 8.5 5 6.9 0.1 2.9 2 1 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component Aminotran_1_2 PF00155.16 AJA92190.1 - 2.2e-57 194.6 0.0 2.7e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 AJA92190.1 - 0.023 13.8 0.0 0.032 13.3 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase DUF871 PF05913.6 AJA92190.1 - 0.031 13.1 0.0 0.05 12.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF871) FbpA PF05833.6 AJA92191.1 - 5.7e-53 180.0 2.4 7.1e-53 179.7 1.7 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 AJA92191.1 - 1.6e-15 56.7 0.1 1.6e-14 53.5 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF814) H2TH PF06831.9 AJA92191.1 - 0.00025 20.7 0.1 0.015 15.0 0.0 3.3 3 0 0 3 3 3 1 Formamidopyrimidine-DNA glycosylase H2TH domain adh_short PF00106.20 AJA92192.1 - 1.2e-39 135.9 0.0 1.5e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 AJA92192.1 - 2.7e-18 66.2 0.1 3.9e-18 65.7 0.1 1.2 1 0 0 1 1 1 1 KR domain adh_short_C2 PF13561.1 AJA92192.1 - 1.1e-15 58.0 0.3 1.6e-15 57.5 0.2 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.10 AJA92192.1 - 3e-06 26.3 0.4 4.4e-06 25.8 0.3 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 AJA92192.1 - 1.1e-05 25.4 0.4 2.4e-05 24.4 0.1 1.7 2 1 0 2 2 2 1 NADH(P)-binding DFP PF04127.10 AJA92192.1 - 0.00034 20.2 0.2 0.00057 19.5 0.1 1.3 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Saccharop_dh PF03435.13 AJA92192.1 - 0.00056 19.0 0.3 0.00077 18.5 0.2 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase Epimerase PF01370.16 AJA92192.1 - 0.00083 18.8 0.1 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.5 AJA92192.1 - 0.00091 18.4 0.0 0.0037 16.4 0.0 1.8 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Shikimate_DH PF01488.15 AJA92192.1 - 0.001 19.2 0.3 0.0016 18.5 0.2 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.13 AJA92192.1 - 0.0014 18.3 1.5 0.0022 17.6 1.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Eno-Rase_NADH_b PF12242.3 AJA92192.1 - 0.0022 17.7 0.1 0.0063 16.2 0.0 1.8 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F420_oxidored PF03807.12 AJA92192.1 - 0.0032 17.8 0.3 0.006 16.9 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Adenylsucc_synt PF00709.16 AJA92192.1 - 0.0034 16.0 0.2 0.0049 15.5 0.1 1.2 1 0 0 1 1 1 1 Adenylosuccinate synthetase 3Beta_HSD PF01073.14 AJA92192.1 - 0.019 13.7 0.2 0.026 13.2 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Pox_J1 PF03338.10 AJA92192.1 - 0.032 13.9 0.5 0.069 12.8 0.2 1.6 2 0 0 2 2 2 0 Poxvirus J1 protein Wax2_C PF12076.3 AJA92192.1 - 0.066 12.9 0.5 0.1 12.2 0.3 1.3 1 0 0 1 1 1 0 WAX2 C-terminal domain 2-Hacid_dh_C PF02826.14 AJA92192.1 - 0.076 12.1 0.1 0.14 11.3 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 AJA92192.1 - 0.12 12.6 1.6 0.22 11.7 0.7 1.8 2 0 0 2 2 2 0 Putative NAD(P)-binding YjeF_N PF03853.10 AJA92192.1 - 0.12 11.9 0.1 0.2 11.2 0.1 1.3 1 0 0 1 1 1 0 YjeF-related protein N-terminus U3snoRNP10 PF12397.3 AJA92192.1 - 0.13 12.1 0.2 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 QRPTase_C PF01729.14 AJA92193.1 - 9.5e-54 181.4 2.8 1.5e-53 180.8 2.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 AJA92193.1 - 4.9e-25 87.1 0.1 1.3e-24 85.8 0.1 1.7 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.12 AJA92193.1 - 0.019 14.0 0.1 0.034 13.2 0.1 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI Lip_prot_lig_C PF10437.4 AJA92193.1 - 0.073 12.7 0.4 0.68 9.6 0.2 2.5 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Polyketide_cyc2 PF10604.4 AJA92194.1 - 2.2e-11 44.1 0.0 2.4e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport FbpA PF05833.6 AJA92194.1 - 0.012 14.1 0.1 0.012 14.1 0.1 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) AA_kinase PF00696.23 AJA92195.1 - 5e-24 85.1 0.1 5.8e-24 84.9 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family Copper-bind PF00127.15 AJA92196.1 - 2.6e-06 27.5 0.0 4.2e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF4448 PF14610.1 AJA92196.1 - 0.033 13.6 0.1 0.043 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) Cupredoxin_1 PF13473.1 AJA92196.1 - 0.047 13.5 0.0 0.075 12.9 0.0 1.5 1 1 0 1 1 1 0 Cupredoxin-like domain Peptidase_M3 PF01432.15 AJA92197.1 - 4.5e-43 147.9 0.2 1.2e-42 146.5 0.1 1.7 1 1 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.5 AJA92197.1 - 4.1e-07 29.9 1.6 2.1e-06 27.6 0.0 2.9 3 0 0 3 3 3 1 Oligopeptidase F DUF955 PF06114.8 AJA92197.1 - 0.012 15.3 0.0 0.029 14.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF955) DUF489 PF04356.7 AJA92197.1 - 0.05 13.2 0.9 2.1 7.8 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF489) Peptidase_MA_2 PF13485.1 AJA92197.1 - 0.077 13.0 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Peptidase MA superfamily ECH PF00378.15 AJA92198.1 - 1.5e-71 240.3 1.3 1.7e-71 240.2 0.9 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family Peptidase_S49 PF01343.13 AJA92198.1 - 0.03 14.0 0.1 2 8.1 0.0 2.3 2 0 0 2 2 2 0 Peptidase family S49 GHMP_kinases_C PF08544.8 AJA92199.1 - 1.9e-09 37.5 0.0 4.2e-09 36.4 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.21 AJA92199.1 - 7.2e-07 29.1 0.1 1.3e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF3023 PF11224.3 AJA92199.1 - 0.012 15.3 4.0 0.03 13.9 2.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3023) SeleniumBinding PF11524.3 AJA92199.1 - 0.028 14.5 0.1 0.12 12.5 0.1 2.1 1 0 0 1 1 1 0 Selenium binding protein PocR PF10114.4 AJA92199.1 - 0.061 12.4 0.1 0.12 11.5 0.1 1.5 1 0 0 1 1 1 0 Sensory domain found in PocR HEM4 PF02602.10 AJA92200.1 - 4.5e-43 147.1 0.0 5.1e-43 146.9 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD LEA_2 PF03168.8 AJA92201.1 - 0.024 15.0 0.1 0.04 14.2 0.0 1.5 1 1 0 1 1 1 0 Late embryogenesis abundant protein PBP PF01161.15 AJA92202.1 - 5.4e-27 94.4 0.0 6.7e-27 94.1 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Methyltransf_31 PF13847.1 AJA92203.1 - 2.2e-12 46.7 0.1 3.1e-12 46.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.8 AJA92203.1 - 3.9e-10 39.3 0.5 1.9e-08 33.8 0.4 2.1 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_18 PF12847.2 AJA92203.1 - 3.4e-09 37.2 0.0 5.6e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92203.1 - 3.7e-09 36.8 0.0 6.5e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 AJA92203.1 - 1.1e-06 29.0 0.0 2e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 AJA92203.1 - 5.6e-06 25.5 0.0 7.8e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 AJA92203.1 - 8.5e-06 24.9 0.1 1.5e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Putative methyltransferase PrmA PF06325.8 AJA92203.1 - 9.8e-05 21.6 0.1 0.00014 21.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.7 AJA92203.1 - 0.0004 20.8 0.0 0.00066 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 AJA92203.1 - 0.00063 19.3 0.0 0.00089 18.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.9 AJA92203.1 - 0.0011 18.4 0.1 0.0021 17.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain GidB PF02527.10 AJA92203.1 - 0.0014 17.8 0.1 0.002 17.3 0.1 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G DUF43 PF01861.11 AJA92203.1 - 0.017 14.0 0.1 0.026 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF43 CMAS PF02353.15 AJA92203.1 - 0.019 14.0 0.0 0.025 13.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 AJA92203.1 - 0.043 12.9 0.1 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Spb1_C PF07780.7 AJA92203.1 - 0.073 12.5 0.1 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Spb1 C-terminal domain A2M_N PF01835.14 AJA92204.1 - 9.6e-06 25.7 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 MG2 domain FlgD_ig PF13860.1 AJA92204.1 - 0.0029 17.3 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 FlgD Ig-like domain Pentapeptide PF00805.17 AJA92205.1 - 3.5e-73 239.9 64.8 1.1e-11 43.6 3.6 10.9 7 3 3 10 10 10 10 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.1 AJA92205.1 - 3.1e-52 174.2 57.5 4e-10 39.3 0.4 7.1 3 1 6 9 9 9 8 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 AJA92205.1 - 1.6e-36 123.9 23.6 1.5e-06 28.0 0.1 10.9 3 3 6 10 10 10 10 Pentapeptide repeats (9 copies) MEKHLA PF08670.6 AJA92205.1 - 0.019 14.5 0.1 33 3.9 0.0 3.3 3 0 0 3 3 3 0 MEKHLA domain Glycos_transf_2 PF00535.21 AJA92206.1 - 3.3e-26 91.9 0.4 6.8e-26 90.9 0.1 1.6 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 AJA92206.1 - 3.6e-11 43.3 0.0 4.9e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 AJA92206.1 - 2.5e-07 30.0 0.3 3.2e-07 29.7 0.2 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 AJA92206.1 - 0.0024 18.1 0.0 0.0067 16.7 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 DUF1888 PF08985.6 AJA92206.1 - 0.033 13.8 0.0 0.06 13.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1888) ABC_tran PF00005.22 AJA92207.1 - 1.9e-19 70.3 0.0 3.4e-19 69.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 AJA92207.1 - 3.7e-10 39.4 0.6 2e-05 23.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 AJA92207.1 - 1.3e-09 38.4 0.4 2e-07 31.3 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 AJA92207.1 - 0.00043 20.1 0.0 0.00062 19.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 AJA92207.1 - 0.0008 18.8 0.1 0.0019 17.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 AJA92207.1 - 0.0017 17.8 0.0 0.0047 16.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain MutS_V PF00488.16 AJA92207.1 - 0.0055 16.1 0.1 1.9 7.8 0.0 2.1 2 0 0 2 2 2 2 MutS domain V AAA_14 PF13173.1 AJA92207.1 - 0.0059 16.4 0.1 0.032 14.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 AJA92207.1 - 0.0073 14.8 1.1 0.032 12.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 AJA92207.1 - 0.011 15.9 0.6 2.1 8.6 0.0 2.7 2 1 1 3 3 3 0 AAA domain AAA_16 PF13191.1 AJA92207.1 - 0.012 15.6 0.2 0.043 13.8 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_17 PF13207.1 AJA92207.1 - 0.015 16.1 0.5 0.09 13.6 0.3 2.4 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.1 AJA92207.1 - 0.017 15.4 0.9 0.046 14.0 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.1 AJA92207.1 - 0.019 14.9 0.0 0.55 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 AJA92207.1 - 0.06 13.4 0.1 0.17 11.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain KaiC PF06745.8 AJA92207.1 - 0.064 12.3 0.2 6.9 5.7 0.0 2.4 3 0 0 3 3 3 0 KaiC Arch_ATPase PF01637.13 AJA92207.1 - 0.07 12.8 0.3 0.39 10.3 0.1 2.0 1 1 1 2 2 2 0 Archaeal ATPase AAA_15 PF13175.1 AJA92207.1 - 0.08 11.9 0.4 2.1 7.2 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain DUF258 PF03193.11 AJA92207.1 - 0.1 11.7 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 RNA_helicase PF00910.17 AJA92207.1 - 0.11 12.7 0.0 0.75 10.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase ArgK PF03308.11 AJA92207.1 - 0.12 11.1 0.0 0.22 10.2 0.0 1.4 1 0 0 1 1 1 0 ArgK protein NTP_transferase PF00483.18 AJA92209.1 - 3.7e-30 105.0 0.0 6.2e-30 104.2 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 AJA92209.1 - 1.3e-14 54.5 0.0 1.7e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 AJA92209.1 - 0.00024 20.8 0.0 0.00032 20.3 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 AJA92209.1 - 0.00025 20.6 0.0 0.00033 20.2 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.21 AJA92209.1 - 0.00097 18.8 0.0 0.0012 18.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Colicin_V PF02674.11 AJA92210.1 - 0.19 11.5 4.0 0.28 11.0 2.7 1.2 1 0 0 1 1 1 0 Colicin V production protein FixP_N PF14715.1 AJA92210.1 - 0.41 10.0 6.2 2.5 7.5 0.0 2.3 1 1 1 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Cpn60_TCP1 PF00118.19 AJA92211.1 - 1.3e-163 545.0 15.8 1.5e-163 544.8 10.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ustilago_mating PF05722.7 AJA92211.1 - 0.019 14.3 0.0 0.04 13.2 0.0 1.5 1 0 0 1 1 1 0 Ustilago B locus mating-type protein DNA_ligase_OB PF03120.11 AJA92211.1 - 0.089 12.4 3.0 5.3 6.7 0.0 3.1 3 0 0 3 3 3 0 NAD-dependent DNA ligase OB-fold domain Dak2 PF02734.12 AJA92211.1 - 0.15 11.7 5.8 1.1 8.8 0.2 2.9 2 1 0 2 2 2 0 DAK2 domain Methyltransf_21 PF05050.7 AJA92212.1 - 6.9e-23 81.4 0.1 1e-22 80.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain PCMT PF01135.14 AJA92212.1 - 3.9e-08 33.0 0.0 5.4e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.2 AJA92212.1 - 9.1e-07 29.4 0.0 1.3e-06 28.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 AJA92212.1 - 1.6e-06 27.8 0.1 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Fibrillarin PF01269.12 AJA92212.1 - 0.0015 17.4 0.0 0.0027 16.6 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin PrmA PF06325.8 AJA92212.1 - 0.021 13.9 0.1 0.03 13.4 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Ribosomal_L22e PF01776.12 AJA92212.1 - 0.026 14.5 1.7 0.58 10.1 0.2 2.7 2 0 0 2 2 2 0 Ribosomal L22e protein family Methyltransf_31 PF13847.1 AJA92212.1 - 0.05 13.1 0.1 0.085 12.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain PMT_2 PF13231.1 AJA92213.1 - 1.2e-08 35.0 20.3 1.2e-08 35.0 14.1 3.1 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Zds_C PF08632.5 AJA92213.1 - 0.0043 16.4 0.5 0.016 14.5 0.3 2.0 2 0 0 2 2 2 1 Activator of mitotic machinery Cdc14 phosphatase activation C-term Transport_MerF PF11431.3 AJA92213.1 - 0.03 13.9 0.5 0.03 13.9 0.3 4.1 4 0 0 4 4 4 0 Membrane transport protein MerF DNA_RNApol_7kD PF03604.8 AJA92214.1 - 0.0057 16.1 4.1 0.97 8.9 0.2 2.3 2 1 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit Antiterm PF03589.8 AJA92214.1 - 0.0061 16.6 0.8 0.0065 16.5 0.5 1.1 1 0 0 1 1 1 1 Antitermination protein HypA PF01155.14 AJA92214.1 - 0.011 15.4 0.8 0.012 15.2 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DZR PF12773.2 AJA92214.1 - 0.012 15.4 2.0 0.024 14.4 1.4 1.6 1 1 0 1 1 1 0 Double zinc ribbon GFA PF04828.9 AJA92214.1 - 0.02 14.8 2.2 0.1 12.5 1.5 1.8 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme ADK_lid PF05191.9 AJA92214.1 - 0.03 13.9 1.1 0.077 12.6 0.1 1.9 2 0 0 2 2 2 0 Adenylate kinase, active site lid Arif-1 PF06770.6 AJA92214.1 - 0.033 13.5 0.2 0.035 13.4 0.2 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) zinc_ribbon_2 PF13240.1 AJA92214.1 - 0.069 12.6 2.3 1 8.9 1.6 2.2 1 1 1 2 2 2 0 zinc-ribbon domain DUF2197 PF09963.4 AJA92214.1 - 0.08 12.9 0.2 0.093 12.7 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) Prok-RING_1 PF14446.1 AJA92214.1 - 0.11 12.2 1.9 5.5 6.7 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.1 AJA92214.1 - 0.35 10.1 2.6 3.9 6.7 0.4 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF4451 PF14616.1 AJA92214.1 - 0.99 9.1 3.3 2.7 7.7 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) NAD_binding_1 PF00175.16 AJA92215.1 - 8.4e-14 52.0 0.0 1.4e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 AJA92215.1 - 8.7e-11 41.8 0.0 1.3e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Radical_SAM PF04055.16 AJA92216.1 - 2.4e-08 34.3 0.3 3.2e-07 30.6 0.0 2.7 3 0 0 3 3 3 1 Radical SAM superfamily B12-binding PF02310.14 AJA92216.1 - 8.6e-08 32.0 0.0 1.7e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain Ribosomal_S6e PF01092.14 AJA92217.1 - 7.2e-20 70.9 0.6 9e-20 70.6 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S6e Ribosomal_60s PF00428.14 AJA92217.1 - 0.32 11.4 6.3 0.57 10.6 2.5 2.0 2 0 0 2 2 2 0 60s Acidic ribosomal protein SNF2_N PF00176.18 AJA92219.1 - 4.3e-39 134.0 0.1 6.4e-39 133.5 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 AJA92219.1 - 1.9e-08 34.0 0.1 4.2e-08 32.9 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 AJA92219.1 - 7.2e-06 25.5 0.0 2e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF445 PF04286.7 AJA92219.1 - 1.4 8.3 9.1 0.61 9.5 2.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF445) DUF359 PF04019.7 AJA92220.1 - 2.2e-34 117.4 0.0 2.9e-34 117.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF359) N6_N4_Mtase PF01555.13 AJA92221.1 - 1e-37 129.8 4.8 1.2e-37 129.5 3.3 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 AJA92221.1 - 5.6e-08 32.8 0.0 0.001 19.0 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 AJA92221.1 - 3.3e-06 26.8 0.0 0.089 12.3 0.0 2.2 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 N6_Mtase PF02384.11 AJA92221.1 - 6.6e-05 22.1 0.1 0.0038 16.3 0.1 2.1 2 0 0 2 2 2 1 N-6 DNA Methylase Rep_1 PF01446.12 AJA92221.1 - 0.026 13.8 0.7 0.041 13.2 0.5 1.3 1 0 0 1 1 1 0 Replication protein MTS PF05175.9 AJA92221.1 - 0.077 12.3 0.0 0.55 9.5 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase small domain AviRa PF11599.3 AJA92221.1 - 0.11 11.4 0.0 0.21 10.5 0.0 1.4 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Pyr_redox_2 PF07992.9 AJA92222.1 - 5e-19 68.9 0.0 1.3e-18 67.6 0.0 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 AJA92222.1 - 1.2e-15 57.6 1.5 1.7e-11 44.3 1.1 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 AJA92222.1 - 0.0014 17.6 0.0 0.42 9.4 0.1 3.4 3 1 1 4 4 4 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 AJA92222.1 - 0.0073 16.3 0.0 0.13 12.3 0.0 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 AJA92222.1 - 0.0094 14.8 0.0 0.94 8.2 0.0 2.6 3 0 0 3 3 3 1 Glucose inhibited division protein A NAD_binding_8 PF13450.1 AJA92222.1 - 0.039 13.9 0.0 18 5.4 0.0 2.8 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.1 AJA92222.1 - 0.079 12.7 0.0 34 4.1 0.0 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding Trp_halogenase PF04820.9 AJA92222.1 - 0.09 11.3 0.0 6.1 5.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.7 AJA92222.1 - 0.092 11.6 0.0 6.5 5.5 0.0 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_binding_2 PF00890.19 AJA92222.1 - 0.31 9.8 0.7 14 4.3 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain EF1_GNE PF00736.14 AJA92223.1 - 6.5e-20 70.6 0.9 7.1e-20 70.5 0.7 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain DUF948 PF06103.6 AJA92223.1 - 0.03 14.1 0.2 0.062 13.1 0.1 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) EzrA PF06160.7 AJA92223.1 - 0.083 11.0 0.1 0.091 10.9 0.0 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Tektin PF03148.9 AJA92223.1 - 0.12 10.8 0.0 0.13 10.7 0.0 1.0 1 0 0 1 1 1 0 Tektin family PALP PF00291.20 AJA92224.1 - 1.5e-63 214.8 0.6 1.8e-63 214.6 0.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Orn_Arg_deC_N PF02784.11 AJA92224.1 - 0.02 14.0 0.0 0.041 13.0 0.0 1.4 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HGTP_anticodon PF03129.15 AJA92225.1 - 3.5e-18 65.3 1.3 1.2e-17 63.6 0.9 1.9 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.20 AJA92225.1 - 6.7e-18 64.8 0.1 1.8e-17 63.5 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) ProRS-C_1 PF09180.6 AJA92225.1 - 1.8e-16 59.7 2.6 4.1e-16 58.6 0.5 2.4 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal FH2 PF02181.18 AJA92226.1 - 0.011 14.6 18.2 0.21 10.4 4.5 3.4 1 1 2 3 3 3 0 Formin Homology 2 Domain MCPsignal PF00015.16 AJA92226.1 - 0.022 14.3 30.4 0.1 12.1 3.0 3.3 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2730 PF10805.3 AJA92226.1 - 0.026 14.2 1.4 0.026 14.2 0.9 3.5 2 1 2 4 4 3 0 Protein of unknown function (DUF2730) Baculo_PEP_C PF04513.7 AJA92226.1 - 0.028 14.2 1.1 0.028 14.2 0.7 4.0 1 1 4 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.6 AJA92226.1 - 0.03 14.1 28.2 0.025 14.4 1.9 5.5 2 2 4 6 6 6 0 Bacterial protein of unknown function (DUF948) DUF3708 PF12501.3 AJA92226.1 - 0.036 13.8 5.2 0.042 13.6 0.5 2.8 2 1 1 3 3 3 0 Phosphate ATP-binding cassette transporter Syntaxin-6_N PF09177.6 AJA92226.1 - 0.1 13.0 19.4 1.1 9.7 1.0 4.6 1 1 4 5 5 5 0 Syntaxin 6, N-terminal ATG16 PF08614.6 AJA92226.1 - 0.14 11.9 23.8 0.027 14.3 1.5 2.9 2 2 1 3 3 3 0 Autophagy protein 16 (ATG16) ISG65-75 PF11727.3 AJA92226.1 - 0.2 10.7 21.6 0.084 11.9 3.2 2.5 1 1 1 2 2 2 0 Invariant surface glycoprotein Reo_sigmaC PF04582.7 AJA92226.1 - 0.4 9.8 16.4 0.81 8.8 1.0 2.8 1 1 2 3 3 3 0 Reovirus sigma C capsid protein DUF310 PF03750.8 AJA92226.1 - 0.88 9.7 0.0 0.88 9.7 0.0 4.3 2 1 3 5 5 5 0 Protein of unknown function (DUF310) DUF869 PF05911.6 AJA92226.1 - 0.94 7.6 36.1 0.026 12.7 15.2 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF869) Fib_alpha PF08702.5 AJA92226.1 - 1.2 9.2 31.4 5.2 7.1 6.0 3.9 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.7 AJA92226.1 - 1.2 8.8 31.7 0.041 13.6 3.5 4.2 1 1 3 4 4 4 0 Laminin Domain II DUF1515 PF07439.6 AJA92226.1 - 1.5 8.6 19.4 0.51 10.1 0.8 4.5 2 2 2 4 4 4 0 Protein of unknown function (DUF1515) DUF1664 PF07889.7 AJA92226.1 - 1.6 8.5 28.7 0.44 10.3 2.6 4.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Mitofilin PF09731.4 AJA92226.1 - 3.8 6.0 28.7 0.51 8.9 14.4 2.2 2 0 0 2 2 2 0 Mitochondrial inner membrane protein Smoothelin PF12510.3 AJA92227.1 - 0.079 12.8 0.5 0.71 9.7 0.0 2.1 2 0 0 2 2 2 0 Smoothelin cytoskeleton protein DUF3571 PF12095.3 AJA92227.1 - 0.093 12.9 0.4 0.63 10.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3571) DUF1978 PF09321.5 AJA92229.1 - 0.0068 15.8 0.9 0.0095 15.4 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1978) DUF3445 PF11927.3 AJA92229.1 - 0.023 14.0 0.1 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3445) TetR_C_2 PF08361.6 AJA92229.1 - 0.025 14.5 0.2 0.041 13.8 0.1 1.4 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region Cas_Csa5 PF09702.5 AJA92229.1 - 0.06 13.4 0.0 0.095 12.8 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa5) Erp_C PF06780.6 AJA92229.1 - 0.082 12.7 2.2 3.6 7.4 0.1 2.5 1 1 1 2 2 2 0 Erp protein C-terminus DEAD PF00270.24 AJA92230.1 - 3.1e-38 130.9 0.1 4e-37 127.3 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase DEAD_assoc PF08494.6 AJA92230.1 - 1.8e-24 86.5 0.4 3.3e-24 85.6 0.0 1.7 2 0 0 2 2 2 1 DEAD/H associated Helicase_C PF00271.26 AJA92230.1 - 2.4e-17 62.5 0.3 3.1e-15 55.8 0.0 3.1 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.10 AJA92230.1 - 1.4e-12 47.8 0.1 3.5e-12 46.5 0.1 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 AJA92230.1 - 9.5e-07 27.9 0.1 1.9e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain SpoU_sub_bind PF08032.7 AJA92230.1 - 0.00031 20.8 2.6 0.014 15.5 0.0 3.6 3 0 0 3 3 3 1 RNA 2'-O ribose methyltransferase substrate binding PhoH PF02562.11 AJA92230.1 - 0.024 13.8 0.0 0.064 12.4 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_16 PF13191.1 AJA92230.1 - 0.034 14.1 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain MGS PF02142.17 AJA92230.1 - 0.09 12.7 0.4 12 5.8 0.0 3.4 2 1 1 3 3 3 0 MGS-like domain UvrD-helicase PF00580.16 AJA92230.1 - 0.14 11.4 4.8 0.085 12.1 0.5 2.7 2 1 0 2 2 2 0 UvrD/REP helicase N-terminal domain Clc-like PF07062.7 AJA92230.1 - 0.15 11.3 0.3 0.26 10.5 0.2 1.3 1 0 0 1 1 1 0 Clc-like DNA_pol_E_B PF04042.11 AJA92231.1 - 1.8e-22 79.6 0.0 2.9e-22 78.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 AJA92231.1 - 1.1e-10 41.5 0.0 2.6e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 AJA92231.1 - 3.5e-07 29.8 0.1 7e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 AJA92231.1 - 0.054 13.3 0.0 0.16 11.8 0.0 1.8 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Nitroreductase PF00881.19 AJA92232.1 - 2.1e-27 95.9 0.0 3e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Arginosuc_synth PF00764.14 AJA92233.1 - 1.3e-159 531.4 0.2 1.4e-159 531.2 0.2 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 AJA92233.1 - 1.3e-07 31.3 0.0 2e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 AJA92233.1 - 0.00012 21.4 0.1 0.00025 20.4 0.0 1.5 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 AJA92233.1 - 0.098 12.1 0.1 0.26 10.7 0.1 1.7 1 1 1 2 2 2 0 PP-loop family DUF650 PF04894.7 AJA92234.1 - 1.3e-85 287.2 0.0 1.8e-85 286.7 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 AJA92234.1 - 7.1e-37 125.4 0.0 1.2e-36 124.6 0.0 1.4 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) PRA-CH PF01502.13 AJA92235.1 - 2.6e-35 119.8 0.1 3.2e-35 119.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase DUF59 PF01883.14 AJA92236.1 - 1.5e-14 53.7 0.6 3.7e-14 52.4 0.1 1.9 3 0 0 3 3 3 1 Domain of unknown function DUF59 PqqD PF05402.7 AJA92236.1 - 8.7e-08 32.0 0.0 1.3e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) HemN_C PF06969.11 AJA92236.1 - 0.048 13.7 0.2 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 HemN C-terminal domain NeuB PF03102.9 AJA92237.1 - 7.5e-77 257.7 0.4 9.2e-77 257.4 0.3 1.1 1 0 0 1 1 1 1 NeuB family DAHP_synth_1 PF00793.15 AJA92237.1 - 0.038 12.6 0.0 0.061 11.9 0.0 1.2 1 0 0 1 1 1 0 DAHP synthetase I family PHP_C PF13263.1 AJA92238.1 - 3.5e-14 52.0 0.1 1.1e-13 50.4 0.0 1.9 2 0 0 2 2 2 1 PHP-associated PHP PF02811.14 AJA92238.1 - 9.1e-06 25.5 0.7 2.4e-05 24.1 0.5 1.8 1 1 0 1 1 1 1 PHP domain 7TM_GPCR_Sri PF10327.4 AJA92238.1 - 0.072 12.0 1.7 0.12 11.3 1.2 1.3 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sri Pyridox_oxidase PF01243.15 AJA92239.1 - 7.4e-15 54.7 0.0 9.2e-15 54.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 AJA92239.1 - 0.0043 16.6 0.0 0.0049 16.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF447) UvrC_HhH_N PF08459.6 AJA92240.1 - 2.2e-51 173.4 2.2 3e-51 173.0 0.0 2.4 3 0 0 3 3 3 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 AJA92240.1 - 2.2e-12 47.1 2.7 2.2e-12 47.1 1.9 2.6 2 0 0 2 2 2 1 GIY-YIG catalytic domain UVR PF02151.14 AJA92240.1 - 1.2e-09 37.3 0.7 4.6e-09 35.5 0.5 2.1 1 0 0 1 1 1 1 UvrB/uvrC motif PP-binding PF00550.20 AJA92241.1 - 0.00015 21.9 0.1 0.00016 21.8 0.1 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF1938 PF09153.5 AJA92241.1 - 0.044 13.5 1.0 0.3 10.9 0.1 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1938) DUF111 PF01969.12 AJA92242.1 - 1e-113 380.0 1.5 1.1e-113 379.8 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Muted PF14942.1 AJA92242.1 - 0.62 9.9 6.6 0.15 11.9 0.6 2.3 3 0 0 3 3 3 0 Organelle biogenesis, Muted-like protein Radical_SAM PF04055.16 AJA92243.1 - 1.5e-20 74.0 0.0 4e-20 72.6 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 AJA92243.1 - 1.7e-05 24.7 0.0 3.8e-05 23.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Pterin_bind PF00809.17 AJA92243.1 - 0.078 12.3 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 Pterin binding enzyme DUF1599 PF07659.6 AJA92243.1 - 0.73 9.9 0.0 0.73 9.9 0.0 2.8 4 0 0 4 4 4 0 Domain of Unknown Function (DUF1599) Copper-bind PF00127.15 AJA92244.1 - 1.1e-07 31.9 0.1 3.2e-07 30.4 0.1 1.8 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 AJA92244.1 - 0.00039 20.2 0.0 0.00054 19.8 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain TP6A_N PF04406.9 AJA92245.1 - 1.3e-17 63.2 0.1 2.8e-17 62.1 0.1 1.6 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Toprim PF01751.17 AJA92245.1 - 0.011 15.6 0.5 0.2 11.6 0.0 2.4 2 0 0 2 2 2 0 Toprim domain DUF3635 PF12330.3 AJA92245.1 - 0.097 12.7 2.0 6.6 6.8 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3635) HD PF01966.17 AJA92247.1 - 2.1e-13 50.3 0.8 2.8e-13 49.9 0.1 1.5 2 0 0 2 2 2 1 HD domain Nuclease_act PF08133.6 AJA92247.1 - 1.5 8.3 5.2 0.25 10.8 0.2 2.2 2 0 0 2 2 2 0 Anticodon nuclease activator family TPR_1 PF00515.23 AJA92248.1 - 5.3e-06 25.8 0.3 0.0056 16.2 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92248.1 - 2e-05 24.1 0.0 5.2e-05 22.8 0.0 1.6 2 0 0 2 2 2 1 TPR repeat TPR_19 PF14559.1 AJA92248.1 - 4.7e-05 23.6 0.0 0.0093 16.2 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92248.1 - 5.5e-05 23.7 0.0 0.00021 21.8 0.0 1.9 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92248.1 - 0.00018 21.1 0.2 0.53 10.3 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Apc3 PF12895.2 AJA92248.1 - 0.00071 19.6 0.1 0.0014 18.6 0.0 1.5 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.1 AJA92248.1 - 0.00073 19.9 0.0 1.5 9.7 0.0 3.1 1 1 2 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92248.1 - 0.024 14.4 3.4 2.6 7.9 0.1 3.1 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat TPR_8 PF13181.1 AJA92248.1 - 0.039 13.7 0.1 2.5 8.1 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_15 PF13429.1 AJA92248.1 - 0.049 12.6 0.0 0.066 12.2 0.0 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92248.1 - 0.12 12.2 0.3 0.58 10.1 0.2 2.0 1 1 0 1 1 1 0 Tetratricopeptide repeat Homoserine_dh PF00742.14 AJA92249.1 - 5.9e-53 179.1 0.2 9.9e-53 178.4 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase ELFV_dehydrog PF00208.16 AJA92249.1 - 3.4e-07 30.0 0.0 7.3e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NAD_binding_3 PF03447.11 AJA92249.1 - 7.1e-05 23.1 0.0 0.00018 21.8 0.0 1.8 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain COX2 PF00116.15 AJA92250.1 - 7.7e-23 80.5 0.4 2.1e-20 72.7 0.3 2.1 1 1 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.1 AJA92250.1 - 1.2e-06 28.3 0.0 1.5e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain PRMT5 PF05185.11 AJA92250.1 - 0.1 11.4 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase RNA_pol_Rpb6 PF01192.17 AJA92251.1 - 1.1e-12 47.4 0.0 3e-12 46.0 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb6 Gluconate_2-dh3 PF13618.1 AJA92251.1 - 0.072 13.2 0.2 0.094 12.8 0.1 1.3 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Cortex-I_coil PF09304.5 AJA92252.1 - 0.012 15.6 2.1 0.61 10.1 0.0 2.1 1 1 1 2 2 2 0 Cortexillin I, coiled coil Sec5 PF15469.1 AJA92252.1 - 0.032 13.9 1.0 0.27 10.9 0.7 1.9 1 1 0 1 1 1 0 Exocyst complex component Sec5 FliD_C PF07195.7 AJA92252.1 - 0.04 13.1 2.1 0.048 12.9 1.5 1.0 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus ERp29 PF07749.7 AJA92252.1 - 0.049 14.2 3.5 0.35 11.5 0.6 2.1 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain DUF3135 PF11333.3 AJA92252.1 - 0.056 13.6 0.0 0.076 13.1 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3135) Baculo_PEP_C PF04513.7 AJA92252.1 - 0.075 12.8 0.5 0.47 10.2 0.1 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ParB PF08775.5 AJA92252.1 - 0.2 11.9 3.4 0.26 11.6 2.4 1.2 1 0 0 1 1 1 0 ParB family Fe_dep_repr_C PF02742.10 AJA92253.1 - 1.9e-16 59.4 0.0 3.8e-16 58.5 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 AJA92253.1 - 4e-16 58.6 0.1 7.8e-16 57.7 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.2 AJA92253.1 - 4.6e-06 26.2 0.0 7.7e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.17 AJA92253.1 - 1.4e-05 24.7 0.0 2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 AJA92253.1 - 1.4e-05 25.3 0.1 2.2e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 AJA92253.1 - 8e-05 22.6 0.0 0.00035 20.6 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulator TrmB PF01978.14 AJA92253.1 - 0.00075 19.1 0.1 0.0012 18.4 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.1 AJA92253.1 - 0.0024 17.6 0.0 0.0046 16.7 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF2250 PF10007.4 AJA92253.1 - 0.011 15.6 0.3 0.016 15.0 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.5 AJA92253.1 - 0.017 14.7 0.0 0.035 13.6 0.0 1.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_20 PF12840.2 AJA92253.1 - 0.022 14.5 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.15 AJA92253.1 - 0.053 13.1 0.1 0.18 11.5 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family IF2_N PF04760.10 AJA92253.1 - 0.058 13.0 0.5 0.17 11.5 0.1 2.1 3 1 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region HTH_45 PF14947.1 AJA92253.1 - 0.1 12.4 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_1 PF00126.22 AJA92253.1 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_6 PF01418.12 AJA92253.1 - 0.12 12.1 0.0 0.27 10.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family NLPC_P60 PF00877.14 AJA92253.1 - 0.14 11.9 0.0 0.59 9.9 0.0 1.8 2 0 0 2 2 2 0 NlpC/P60 family AHSA1 PF08327.6 AJA92254.1 - 6e-08 32.8 0.0 9.6e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc PF03364.15 AJA92254.1 - 1.5e-06 28.2 0.0 2.8e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.4 AJA92254.1 - 4.1e-06 27.0 0.0 5.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport IGPD PF00475.13 AJA92255.1 - 1.3e-48 164.5 2.1 1.6e-48 164.2 1.5 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase DUF916 PF06030.7 AJA92255.1 - 0.007 16.1 0.1 0.039 13.7 0.0 2.2 3 0 0 3 3 3 1 Bacterial protein of unknown function (DUF916) Histidinol_dh PF00815.15 AJA92256.1 - 7.9e-124 413.4 3.8 9.6e-124 413.1 2.6 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase T_Ag_DNA_bind PF02217.11 AJA92256.1 - 0.029 14.7 0.1 0.085 13.2 0.1 1.9 1 0 0 1 1 1 0 Origin of replication binding protein Aminotran_1_2 PF00155.16 AJA92257.1 - 4.2e-60 203.6 0.0 6e-60 203.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II CM_2 PF01817.16 AJA92257.1 - 8.5e-10 38.5 1.0 1.8e-09 37.5 0.7 1.6 1 0 0 1 1 1 1 Chorismate mutase type II Aminotran_5 PF00266.14 AJA92257.1 - 1.8e-07 30.2 0.0 6.3e-07 28.4 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 AJA92257.1 - 7.6e-05 21.9 0.0 0.00048 19.2 0.0 2.0 1 1 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 AJA92257.1 - 9e-05 20.9 0.0 0.00021 19.7 0.0 1.6 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme CENP-H PF05837.7 AJA92257.1 - 0.077 13.1 3.2 0.22 11.7 2.2 1.8 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Romo1 PF10247.4 AJA92257.1 - 0.13 12.4 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 zf-like PF04071.7 AJA92258.1 - 0.037 13.7 0.9 0.041 13.5 0.6 1.1 1 0 0 1 1 1 0 Cysteine-rich small domain Mgr1 PF08602.5 AJA92258.1 - 0.041 12.9 0.9 0.042 12.8 0.6 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit HSA PF07529.8 AJA92258.1 - 0.11 12.3 4.2 0.14 11.9 2.9 1.3 1 1 0 1 1 1 0 HSA Baculo_LEF-2 PF03041.9 AJA92258.1 - 0.11 12.1 1.4 0.11 12.1 1.0 1.1 1 0 0 1 1 1 0 lef-2 DUF1154 PF06631.6 AJA92258.1 - 4.4 7.0 12.1 0.099 12.3 3.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1154) OrfB_Zn_ribbon PF07282.6 AJA92259.1 - 0.1 12.2 8.1 0.072 12.7 1.7 2.0 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Pput2613-deam PF14427.1 AJA92259.1 - 0.12 12.0 0.3 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 Pput_2613-like deaminase dCMP_cyt_deam_1 PF00383.17 AJA92259.1 - 0.13 11.9 1.2 0.22 11.1 0.9 1.5 1 1 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Auto_anti-p27 PF06677.7 AJA92259.1 - 0.13 12.0 0.8 7.5 6.4 0.0 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DM PF00751.13 AJA92259.1 - 0.23 11.0 3.0 0.54 9.8 0.8 2.0 2 0 0 2 2 2 0 DM DNA binding domain DnaJ_CXXCXGXG PF00684.14 AJA92259.1 - 0.24 11.4 5.4 0.59 10.2 3.8 1.7 1 1 0 1 1 1 0 DnaJ central domain A2L_zn_ribbon PF08792.5 AJA92259.1 - 1.4 8.5 7.7 0.44 10.0 0.4 2.4 2 1 0 2 2 2 0 A2L zinc ribbon domain zf-CXXC PF02008.15 AJA92259.1 - 6 6.7 7.6 2 8.2 0.6 2.1 1 1 1 2 2 2 0 CXXC zinc finger domain ABC_tran PF00005.22 AJA92260.1 - 2.6e-24 86.0 0.2 3e-10 40.5 0.0 4.5 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.14 AJA92260.1 - 2.4e-09 36.7 3.3 0.037 13.2 0.0 4.2 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 AJA92260.1 - 6.5e-08 32.8 10.4 0.0013 18.7 0.2 4.4 4 0 0 4 4 4 2 AAA domain AAA_29 PF13555.1 AJA92260.1 - 1.5e-07 30.8 1.5 0.014 14.8 0.0 2.9 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_14 PF13173.1 AJA92260.1 - 1.6e-06 28.0 0.2 0.05 13.4 0.0 3.8 3 0 0 3 3 3 2 AAA domain DUF258 PF03193.11 AJA92260.1 - 6.8e-06 25.3 2.0 0.085 12.0 0.1 2.8 3 0 0 3 3 3 2 Protein of unknown function, DUF258 AAA_33 PF13671.1 AJA92260.1 - 1.2e-05 25.1 0.1 0.21 11.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 AJA92260.1 - 1.9e-05 24.7 0.1 0.14 12.1 0.1 2.8 2 0 0 2 2 2 2 AAA ATPase domain AAA_25 PF13481.1 AJA92260.1 - 3.1e-05 23.4 0.2 0.26 10.6 0.0 3.5 4 0 0 4 4 3 2 AAA domain AAA_18 PF13238.1 AJA92260.1 - 5e-05 23.6 3.7 0.41 10.9 0.1 4.4 4 0 0 4 4 3 2 AAA domain APS_kinase PF01583.15 AJA92260.1 - 0.00013 21.6 0.3 0.7 9.5 0.0 2.7 2 0 0 2 2 2 2 Adenylylsulphate kinase AAA_22 PF13401.1 AJA92260.1 - 0.00014 22.0 5.5 0.59 10.2 0.2 4.5 4 1 0 4 4 4 2 AAA domain AAA_10 PF12846.2 AJA92260.1 - 0.00014 21.4 1.6 0.18 11.2 0.1 2.9 3 0 0 3 3 3 2 AAA-like domain NB-ARC PF00931.17 AJA92260.1 - 0.0004 19.3 0.7 2.2 7.0 0.0 4.1 4 0 0 4 4 4 2 NB-ARC domain Viral_helicase1 PF01443.13 AJA92260.1 - 0.0004 19.9 0.0 0.048 13.1 0.1 2.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase MobB PF03205.9 AJA92260.1 - 0.00047 19.8 0.4 0.19 11.4 0.1 3.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 AJA92260.1 - 0.00047 19.3 0.0 0.44 9.6 0.0 2.8 2 0 0 2 2 2 2 KaiC AAA_19 PF13245.1 AJA92260.1 - 0.00065 19.3 0.0 1.3 8.8 0.0 3.3 3 0 0 3 3 3 1 Part of AAA domain T2SE PF00437.15 AJA92260.1 - 0.00099 18.0 0.1 0.92 8.3 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein NACHT PF05729.7 AJA92260.1 - 0.0012 18.5 0.0 0.63 9.6 0.0 2.6 2 0 0 2 2 2 1 NACHT domain Arch_ATPase PF01637.13 AJA92260.1 - 0.0013 18.5 4.5 1 8.9 0.1 4.0 3 1 0 3 3 3 2 Archaeal ATPase AAA_17 PF13207.1 AJA92260.1 - 0.0013 19.5 12.3 0.16 12.8 0.6 4.3 4 1 1 5 5 4 2 AAA domain AAA_23 PF13476.1 AJA92260.1 - 0.0014 18.9 12.9 0.0089 16.3 0.1 4.0 4 0 0 4 4 4 2 AAA domain MMR_HSR1 PF01926.18 AJA92260.1 - 0.0027 17.6 4.1 0.07 13.0 0.1 3.6 3 1 0 3 3 3 1 50S ribosome-binding GTPase DnaJ_CXXCXGXG PF00684.14 AJA92260.1 - 0.0032 17.4 0.8 0.0032 17.4 0.5 4.2 4 1 1 5 5 4 1 DnaJ central domain cobW PF02492.14 AJA92260.1 - 0.0034 16.8 0.9 0.62 9.4 0.1 2.8 3 0 0 3 3 2 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 AJA92260.1 - 0.01 14.6 0.0 0.76 8.5 0.0 2.7 2 0 0 2 2 2 0 ArgK protein FtsK_SpoIIIE PF01580.13 AJA92260.1 - 0.01 15.3 0.2 1.8 7.9 0.0 2.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF2075 PF09848.4 AJA92260.1 - 0.012 14.6 0.6 3.8 6.3 0.0 2.8 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.17 AJA92260.1 - 0.014 15.5 0.1 5.9 7.1 0.0 3.2 3 0 0 3 3 2 0 RNA helicase NTPase_1 PF03266.10 AJA92260.1 - 0.014 15.1 2.4 0.51 10.0 0.0 3.5 3 0 0 3 3 3 0 NTPase PRK PF00485.13 AJA92260.1 - 0.043 13.3 0.1 2.3 7.7 0.0 2.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.7 AJA92260.1 - 0.051 12.6 0.0 3.5 6.6 0.0 2.7 3 0 0 3 3 2 0 Zeta toxin Miro PF08477.8 AJA92260.1 - 0.051 14.0 1.8 15 6.1 0.1 3.7 3 0 0 3 3 3 0 Miro-like protein AAA_28 PF13521.1 AJA92260.1 - 0.099 12.5 0.2 19 5.1 0.2 2.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 AJA92260.1 - 0.18 11.3 0.3 17 4.9 0.0 2.9 3 0 0 3 3 2 0 AAA domain SbcCD_C PF13558.1 AJA92260.1 - 0.43 10.5 3.6 14 5.6 0.0 3.6 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit Amidohydro_4 PF13147.1 AJA92261.1 - 1e-21 78.2 0.0 5.9e-11 42.9 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_5 PF13594.1 AJA92261.1 - 7.6e-12 44.8 0.5 1.7e-11 43.7 0.3 1.6 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 AJA92261.1 - 8.3e-12 45.3 1.7 1.1e-07 31.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.6 AJA92261.1 - 3.3e-08 33.1 1.0 7.1e-06 25.4 0.0 2.6 3 1 0 3 3 3 2 Amidohydrolase family TatD_DNase PF01026.16 AJA92261.1 - 0.051 12.7 0.6 0.11 11.6 0.5 1.6 1 1 0 1 1 1 0 TatD related DNase NAD_binding_1 PF00175.16 AJA92263.1 - 1.4e-14 54.5 0.0 2.8e-14 53.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 AJA92263.1 - 3.8e-11 42.2 6.4 6.8e-11 41.4 4.4 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 AJA92263.1 - 3.5e-07 30.2 0.0 6.6e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain FAD_binding_8 PF08022.7 AJA92263.1 - 0.0092 15.8 0.0 0.021 14.6 0.0 1.7 1 1 0 1 1 1 1 FAD-binding domain AAA PF00004.24 AJA92264.1 - 5.8e-100 330.6 0.2 2.7e-49 166.7 0.0 2.7 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 AJA92264.1 - 3e-28 97.6 0.1 1.1e-27 95.7 0.1 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 AJA92264.1 - 4.2e-16 59.3 0.2 3.5e-07 30.2 0.0 3.0 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 AJA92264.1 - 8.6e-15 54.4 0.0 7.7e-09 34.9 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 AJA92264.1 - 2e-13 50.7 0.0 5.3e-06 26.5 0.0 3.2 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.1 AJA92264.1 - 1.3e-12 47.9 0.1 4.1e-05 23.7 0.0 4.2 2 2 1 3 3 3 2 AAA domain AAA_17 PF13207.1 AJA92264.1 - 4.7e-11 43.5 0.1 4.1e-05 24.3 0.0 3.0 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.8 AJA92264.1 - 1e-10 40.9 0.1 0.00011 21.0 0.0 2.5 2 0 0 2 2 2 2 TIP49 C-terminus AAA_14 PF13173.1 AJA92264.1 - 4.2e-10 39.6 0.0 0.00017 21.4 0.0 3.0 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.1 AJA92264.1 - 7e-10 38.9 0.0 0.0006 19.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.9 AJA92264.1 - 1.3e-09 37.9 0.7 0.00089 18.9 0.1 4.0 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.7 AJA92264.1 - 1.5e-09 37.2 0.1 6.8e-05 22.0 0.0 3.1 3 0 0 3 3 2 2 Zeta toxin IstB_IS21 PF01695.12 AJA92264.1 - 2.5e-08 33.5 0.2 0.0034 16.8 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein Arch_ATPase PF01637.13 AJA92264.1 - 2.9e-08 33.6 0.8 0.0045 16.7 0.0 4.5 3 2 2 5 5 5 2 Archaeal ATPase CDC48_2 PF02933.12 AJA92264.1 - 1.2e-07 31.2 0.1 3.2e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_19 PF13245.1 AJA92264.1 - 1.5e-07 31.0 3.6 0.0053 16.4 0.1 3.5 3 0 0 3 3 3 2 Part of AAA domain Sigma54_activat PF00158.21 AJA92264.1 - 1.7e-07 30.8 0.1 0.045 13.2 0.0 3.4 3 1 0 3 3 2 2 Sigma-54 interaction domain RNA_helicase PF00910.17 AJA92264.1 - 1.1e-06 28.7 0.0 0.038 14.1 0.0 2.7 2 0 0 2 2 2 2 RNA helicase KaiC PF06745.8 AJA92264.1 - 1.2e-06 27.8 1.1 0.1 11.7 0.0 3.8 3 1 1 4 4 3 2 KaiC AAA_28 PF13521.1 AJA92264.1 - 5e-06 26.5 0.5 0.011 15.6 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA_18 PF13238.1 AJA92264.1 - 6.1e-06 26.5 2.8 0.019 15.2 0.0 3.4 4 0 0 4 4 3 2 AAA domain Bac_DnaA PF00308.13 AJA92264.1 - 7.1e-06 25.8 0.0 0.003 17.2 0.0 2.5 2 0 0 2 2 2 1 Bacterial dnaA protein Mg_chelatase PF01078.16 AJA92264.1 - 1.4e-05 24.3 1.2 0.034 13.3 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI NACHT PF05729.7 AJA92264.1 - 1.4e-05 24.7 0.2 0.76 9.4 0.0 4.0 3 1 0 4 4 4 2 NACHT domain PhoH PF02562.11 AJA92264.1 - 1.6e-05 24.2 0.3 0.19 10.9 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein Sigma54_activ_2 PF14532.1 AJA92264.1 - 2.2e-05 24.5 0.0 0.11 12.5 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_24 PF13479.1 AJA92264.1 - 6.9e-05 22.5 0.1 0.026 14.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.17 AJA92264.1 - 0.00014 20.8 0.0 0.098 11.5 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain DUF815 PF05673.8 AJA92264.1 - 0.00022 20.2 0.0 0.088 11.7 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF815) ABC_tran PF00005.22 AJA92264.1 - 0.00026 21.3 0.0 0.69 10.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_3 PF07726.6 AJA92264.1 - 0.00043 19.8 0.0 0.38 10.3 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.1 AJA92264.1 - 0.00052 19.6 0.1 0.6 9.6 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 AJA92264.1 - 0.00058 19.3 11.1 0.7 9.2 0.2 4.7 3 2 1 4 4 4 1 AAA domain NTPase_1 PF03266.10 AJA92264.1 - 0.0006 19.5 0.3 3.6 7.2 0.0 4.0 2 1 1 3 3 3 0 NTPase ResIII PF04851.10 AJA92264.1 - 0.00069 19.4 0.1 0.51 10.1 0.0 2.9 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DUF2075 PF09848.4 AJA92264.1 - 0.0012 17.9 0.5 0.32 9.9 0.0 2.7 3 0 0 3 3 3 1 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.12 AJA92264.1 - 0.0015 17.4 0.0 0.26 10.1 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 T2SE PF00437.15 AJA92264.1 - 0.0035 16.2 0.0 1.8 7.4 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein UPF0079 PF02367.12 AJA92264.1 - 0.0036 16.9 1.1 2.7 7.6 0.0 2.9 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 SKI PF01202.17 AJA92264.1 - 0.0036 17.1 0.0 0.76 9.6 0.0 2.6 2 0 0 2 2 2 1 Shikimate kinase ATP-synt_ab PF00006.20 AJA92264.1 - 0.0037 16.7 0.0 0.97 8.8 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Guanylate_kin PF00625.16 AJA92264.1 - 0.0058 16.0 0.1 4.3 6.7 0.0 3.6 2 1 1 3 3 3 0 Guanylate kinase CPT PF07931.7 AJA92264.1 - 0.016 14.8 0.0 2.3 7.8 0.0 2.8 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_11 PF13086.1 AJA92264.1 - 0.016 14.7 0.1 1.5 8.3 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.1 AJA92264.1 - 0.021 14.3 0.0 4.3 6.9 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AFG1_ATPase PF03969.11 AJA92264.1 - 0.024 13.4 0.0 3.4 6.3 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase IPT PF01745.11 AJA92264.1 - 0.053 12.6 0.1 11 5.1 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase Viral_helicase1 PF01443.13 AJA92264.1 - 0.055 12.9 0.0 2.4 7.5 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase KAP_NTPase PF07693.9 AJA92264.1 - 0.095 11.6 0.2 7.2 5.5 0.0 2.9 2 2 1 3 3 3 0 KAP family P-loop domain Torsin PF06309.6 AJA92264.1 - 0.17 11.7 0.1 10 6.0 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_10 PF12846.2 AJA92264.1 - 0.2 11.0 1.0 24 4.2 0.1 3.1 2 2 0 2 2 2 0 AAA-like domain polyprenyl_synt PF00348.12 AJA92265.1 - 2e-70 236.6 0.6 2.4e-70 236.3 0.4 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Terpene_synth_C PF03936.11 AJA92265.1 - 0.0021 17.3 0.0 0.0031 16.8 0.0 1.3 1 0 0 1 1 1 1 Terpene synthase family, metal binding domain HEPPP_synt_1 PF07307.6 AJA92265.1 - 0.0031 16.9 0.0 0.0055 16.1 0.0 1.4 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 Rsd_AlgQ PF04353.8 AJA92265.1 - 0.07 12.8 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ TPR_1 PF00515.23 AJA92266.1 - 5.2e-52 171.4 14.9 2.9e-08 32.9 0.0 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92266.1 - 5.2e-50 166.9 11.2 1.8e-14 53.0 0.1 5.1 2 1 1 5 5 5 5 TPR repeat TPR_2 PF07719.12 AJA92266.1 - 1.9e-47 155.3 6.6 7.5e-06 25.4 0.0 8.2 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92266.1 - 2.6e-42 142.6 8.6 2.7e-12 46.4 0.0 5.3 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92266.1 - 2.8e-39 132.9 0.0 4.3e-10 39.9 0.0 5.2 3 2 1 5 5 5 4 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92266.1 - 6e-36 119.6 14.3 9.8e-06 25.3 0.0 8.5 9 0 0 9 9 8 7 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92266.1 - 3.1e-33 111.2 0.0 0.00011 22.5 0.1 8.1 1 1 7 8 8 8 7 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92266.1 - 1.9e-30 105.0 5.6 8.1e-10 38.9 0.0 5.2 2 1 1 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92266.1 - 2.8e-29 98.6 13.0 0.00087 18.8 0.2 8.2 5 1 3 8 8 8 7 Tetratricopeptide repeat Apc3 PF12895.2 AJA92266.1 - 4.4e-24 84.4 13.8 7.5e-08 32.4 0.0 4.9 3 2 1 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 AJA92266.1 - 6.2e-23 78.7 0.7 0.00071 19.1 0.0 7.4 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92266.1 - 2.7e-21 74.4 2.2 0.016 15.6 0.0 8.1 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_9 PF13371.1 AJA92266.1 - 1.9e-19 69.2 0.0 1.3e-07 31.4 0.0 5.0 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_20 PF14561.1 AJA92266.1 - 5.7e-14 52.0 7.4 0.0072 16.4 0.0 6.0 2 1 5 7 7 7 4 Tetratricopeptide repeat TPR_10 PF13374.1 AJA92266.1 - 6.5e-12 44.9 0.2 0.0036 17.1 0.0 6.1 6 0 0 6 6 6 2 Tetratricopeptide repeat Coatomer_E PF04733.9 AJA92266.1 - 2.1e-10 40.2 9.0 0.0051 16.0 0.1 4.5 1 1 4 5 5 5 4 Coatomer epsilon subunit Fis1_TPR_C PF14853.1 AJA92266.1 - 6.2e-10 38.8 8.6 0.0071 16.1 0.0 7.1 6 2 2 8 8 8 1 Fis1 C-terminal tetratricopeptide repeat ChAPs PF09295.5 AJA92266.1 - 8.1e-09 34.7 0.8 2.3e-05 23.3 0.0 2.4 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_15 PF13429.1 AJA92266.1 - 4.6e-08 32.4 0.1 3e-05 23.2 0.0 3.2 1 1 1 2 2 2 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 AJA92266.1 - 6e-06 26.5 2.4 0.0088 16.2 0.0 3.8 4 0 0 4 4 4 1 Alkyl sulfatase dimerisation Rapsyn_N PF10579.4 AJA92266.1 - 1.6e-05 24.6 0.1 0.28 11.0 0.0 4.2 3 1 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region MIT PF04212.13 AJA92266.1 - 5.2e-05 23.0 2.7 2.2 8.1 0.0 5.2 6 0 0 6 6 6 1 MIT (microtubule interacting and transport) domain TPR_5 PF12688.2 AJA92266.1 - 6.6e-05 22.9 0.0 0.31 11.0 0.0 3.3 2 1 1 3 3 3 2 Tetratrico peptide repeat TPR_3 PF07720.7 AJA92266.1 - 8.5e-05 22.2 11.9 0.28 11.0 0.0 6.2 6 0 0 6 6 6 1 Tetratricopeptide repeat DUF3856 PF12968.2 AJA92266.1 - 0.0011 18.8 0.1 6.1 6.6 0.0 4.3 4 1 1 5 5 4 0 Domain of Unknown Function (DUF3856) TPR_4 PF07721.9 AJA92266.1 - 0.0012 19.0 0.0 0.33 11.5 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.12 AJA92266.1 - 0.0016 18.7 0.0 0.034 14.4 0.0 2.7 1 1 2 3 3 2 1 Bacterial transcriptional activator domain TPR_21 PF09976.4 AJA92266.1 - 0.002 18.1 0.6 0.073 13.0 0.1 3.3 2 1 3 5 5 5 2 Tetratricopeptide repeat NARP1 PF12569.3 AJA92266.1 - 0.0073 15.1 14.6 0.06 12.0 0.2 3.8 1 1 3 5 5 5 2 NMDA receptor-regulated protein 1 FAT PF02259.18 AJA92266.1 - 0.011 14.7 0.2 0.011 14.7 0.1 2.6 1 1 1 2 2 2 0 FAT domain TOM20_plant PF06552.7 AJA92266.1 - 0.032 13.8 10.8 5.9 6.4 0.1 5.0 2 1 2 5 5 5 0 Plant specific mitochondrial import receptor subunit TOM20 SelP_N PF04592.9 AJA92266.1 - 0.19 11.0 9.0 0.32 10.3 6.2 1.3 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Zip PF02535.17 AJA92266.1 - 0.84 8.5 2.8 1.1 8.1 2.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF2796 PF10986.3 AJA92266.1 - 1.3 8.9 15.7 0.88 9.5 8.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2796) TPR_11 PF13414.1 AJA92267.1 - 1.9e-31 107.4 2.7 9.6e-17 60.3 0.0 3.0 1 1 2 3 3 3 3 TPR repeat TPR_1 PF00515.23 AJA92267.1 - 6.3e-31 104.7 4.5 6.7e-10 38.1 0.0 4.0 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92267.1 - 3e-25 86.0 2.8 4.6e-07 29.2 0.0 4.0 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92267.1 - 1.1e-18 66.8 3.1 3.5e-08 33.2 0.1 3.3 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92267.1 - 1.9e-17 61.8 0.8 1.5e-08 34.1 0.0 3.6 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92267.1 - 7.3e-16 56.6 7.6 1.4e-05 24.5 0.0 4.1 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92267.1 - 5.5e-14 52.4 0.1 1.2e-07 32.2 0.1 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92267.1 - 1.7e-13 50.7 1.1 3.2e-07 30.5 0.0 2.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.1 AJA92267.1 - 1.9e-11 42.8 2.3 0.0095 15.6 0.0 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92267.1 - 9.4e-11 41.3 0.0 3.7e-05 23.9 0.0 3.7 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92267.1 - 3.8e-07 30.1 0.4 1.3 9.6 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat Apc3 PF12895.2 AJA92267.1 - 7.5e-07 29.1 3.5 0.00052 20.0 0.3 2.5 1 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 AJA92267.1 - 1.6e-06 27.2 1.4 0.00017 20.4 0.0 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_9 PF13371.1 AJA92267.1 - 2.2e-06 27.4 0.0 1.3e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat MIT PF04212.13 AJA92267.1 - 2.4e-06 27.3 6.0 0.27 11.1 0.1 3.4 2 1 1 3 3 3 3 MIT (microtubule interacting and transport) domain TPR_15 PF13429.1 AJA92267.1 - 0.0016 17.5 0.5 0.0033 16.5 0.3 1.5 1 1 1 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.9 AJA92267.1 - 0.005 16.0 0.2 0.0096 15.1 0.1 1.4 1 1 0 1 1 1 1 Coatomer epsilon subunit SHNi-TPR PF10516.4 AJA92267.1 - 0.0094 15.1 0.3 4.7 6.5 0.0 3.1 3 0 0 3 3 3 1 SHNi-TPR TPR_10 PF13374.1 AJA92267.1 - 0.017 15.0 0.0 14 5.7 0.0 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat DUF3856 PF12968.2 AJA92267.1 - 0.027 14.3 0.3 1.5 8.6 0.0 3.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF3856) SNAP PF14938.1 AJA92267.1 - 0.032 13.3 5.6 0.068 12.3 0.5 2.5 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP FAT PF02259.18 AJA92267.1 - 0.1 11.5 0.4 0.59 9.0 0.3 2.0 1 1 0 1 1 1 0 FAT domain NSF PF02071.15 AJA92267.1 - 0.26 11.9 2.6 94 4.3 0.1 3.9 3 1 0 3 3 3 0 Aromatic-di-Alanine (AdAR) repeat Sdh_cyt PF01127.17 AJA92268.1 - 4.4e-09 36.1 1.5 5.6e-09 35.8 0.9 1.2 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF4027 PF13219.1 AJA92268.1 - 0.0043 16.4 0.2 0.015 14.7 0.0 2.0 3 0 0 3 3 3 1 Protein of unknown function (DUF4027) NfeD PF01957.13 AJA92269.1 - 2.3 8.3 5.9 0.5 10.5 1.2 1.8 1 1 1 2 2 2 0 NfeD-like C-terminal, partner-binding Colicin_V PF02674.11 AJA92269.1 - 7 6.4 11.6 0.98 9.2 2.9 2.4 2 1 1 3 3 3 0 Colicin V production protein Rhodanese PF00581.15 AJA92270.1 - 8.6e-41 138.8 0.0 4e-19 69.0 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF3562 PF12085.3 AJA92270.1 - 0.047 13.5 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) Polysacc_synt_4 PF04669.8 AJA92271.1 - 0.15 11.3 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis Peptidase_M50 PF02163.17 AJA92272.1 - 2.2e-25 88.7 0.0 2.5e-24 85.3 0.0 2.4 2 1 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 AJA92272.1 - 4.6e-12 45.6 0.1 7.7e-12 44.9 0.1 1.3 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.19 AJA92272.1 - 2.3e-06 27.6 0.5 5e-06 26.6 0.3 1.6 2 0 0 2 2 2 1 PDZ domain (Also known as DHR or GLGF) Ammonium_transp PF00909.16 AJA92273.1 - 4.8e-107 357.8 32.0 8.7e-107 357.0 22.2 1.4 1 1 0 1 1 1 1 Ammonium Transporter Family Ribosomal_L11_N PF03946.9 AJA92274.1 - 1.4e-24 85.3 0.7 1.4e-24 85.3 0.5 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 AJA92274.1 - 5.8e-17 61.6 1.6 8.7e-17 61.0 1.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_S10 PF00338.17 AJA92274.1 - 0.12 12.2 0.1 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein S10p/S20e DUF3137 PF11335.3 AJA92275.1 - 0.079 12.6 0.1 0.088 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3137) DEAD PF00270.24 AJA92276.1 - 1.5e-25 89.6 0.1 5.1e-25 87.9 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 AJA92276.1 - 5.6e-10 39.3 4.0 1.7e-09 37.7 0.0 3.1 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 AJA92276.1 - 5e-09 35.8 0.0 1.4e-08 34.4 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HHH_2 PF12826.2 AJA92276.1 - 5.7e-06 26.1 0.2 4.3e-05 23.3 0.0 2.5 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.1 AJA92276.1 - 0.00012 22.1 0.2 0.00044 20.3 0.2 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain T2SE PF00437.15 AJA92276.1 - 0.028 13.3 0.0 0.056 12.3 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein PUA PF01472.15 AJA92277.1 - 1.5e-08 34.2 0.0 2.3e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.1 AJA92277.1 - 1.7e-08 34.1 0.0 3e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase zf-piccolo PF05715.8 AJA92278.1 - 0.16 12.0 0.8 0.22 11.5 0.5 1.2 1 0 0 1 1 1 0 Piccolo Zn-finger zf-A20 PF01754.11 AJA92278.1 - 4 7.1 5.6 0.47 10.0 0.6 1.8 2 0 0 2 2 2 0 A20-like zinc finger GHMP_kinases_N PF00288.21 AJA92279.1 - 3.6e-18 65.3 1.6 8.3e-18 64.2 1.1 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 AJA92279.1 - 4.4e-11 42.8 0.0 1.1e-10 41.5 0.0 1.7 2 0 0 2 2 2 1 GHMP kinases C terminal FlpD PF02662.11 AJA92279.1 - 0.12 12.0 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit TatC PF00902.13 AJA92280.1 - 1.8e-59 200.7 17.1 2.2e-59 200.4 11.9 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) BATS PF06968.8 AJA92281.1 - 4.1e-22 77.8 0.0 2.1e-21 75.5 0.0 2.1 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.16 AJA92281.1 - 2.9e-20 73.0 1.2 1.5e-18 67.5 0.5 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 AJA92281.1 - 0.048 13.6 1.9 0.4 10.7 0.5 2.4 1 1 0 2 2 2 0 4Fe-4S single cluster domain FAD_binding_7 PF03441.9 AJA92283.1 - 8.3e-93 310.5 0.4 1e-92 310.2 0.3 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.13 AJA92283.1 - 1.9e-33 115.5 0.0 3.6e-33 114.6 0.0 1.4 1 0 0 1 1 1 1 DNA photolyase ECR1_N PF14382.1 AJA92284.1 - 2.1e-08 33.2 0.0 5.7e-08 31.9 0.0 1.7 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region Prok-RING_1 PF14446.1 AJA92284.1 - 0.0039 16.8 1.2 0.0076 15.9 0.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 DNA_RNApol_7kD PF03604.8 AJA92284.1 - 0.32 10.5 4.7 0.75 9.3 2.7 2.1 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit AAA_18 PF13238.1 AJA92285.1 - 1.1e-11 45.1 0.0 1.6e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 AJA92285.1 - 1.9e-06 27.9 0.0 3.6e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 AJA92285.1 - 5.4e-06 27.2 0.0 8.9e-06 26.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 AJA92285.1 - 8.8e-06 25.2 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_16 PF13191.1 AJA92285.1 - 9.6e-05 22.4 0.0 0.00015 21.8 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain Miro PF08477.8 AJA92285.1 - 0.00011 22.7 0.1 0.00021 21.7 0.1 1.5 1 0 0 1 1 1 1 Miro-like protein MMR_HSR1 PF01926.18 AJA92285.1 - 0.00035 20.4 0.1 0.00052 19.9 0.1 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase NACHT PF05729.7 AJA92285.1 - 0.00044 19.9 0.0 0.00056 19.6 0.0 1.4 1 1 0 1 1 1 1 NACHT domain AAA_33 PF13671.1 AJA92285.1 - 0.0014 18.5 0.0 0.0021 17.9 0.0 1.3 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.5 AJA92285.1 - 0.0015 17.7 0.1 0.0019 17.4 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA PF00004.24 AJA92285.1 - 0.0017 18.5 0.1 0.0042 17.2 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 AJA92285.1 - 0.0018 18.4 0.1 0.0028 17.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.9 AJA92285.1 - 0.003 17.2 0.0 0.0052 16.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Ras PF00071.17 AJA92285.1 - 0.0047 16.3 1.1 0.029 13.7 0.1 2.2 1 1 1 2 2 2 1 Ras family Arch_ATPase PF01637.13 AJA92285.1 - 0.0052 16.5 0.0 0.0072 16.0 0.0 1.4 1 1 0 1 1 1 1 Archaeal ATPase cobW PF02492.14 AJA92285.1 - 0.0063 15.9 0.4 0.014 14.8 0.0 1.8 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.10 AJA92285.1 - 0.0074 16.0 0.3 0.016 14.9 0.2 1.8 1 1 0 1 1 1 1 NTPase ABC_tran PF00005.22 AJA92285.1 - 0.008 16.4 0.1 0.012 15.9 0.1 1.5 1 1 0 1 1 1 1 ABC transporter AAA_30 PF13604.1 AJA92285.1 - 0.012 15.1 0.1 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.10 AJA92285.1 - 0.014 14.3 0.1 0.055 12.3 0.0 1.9 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain MobB PF03205.9 AJA92285.1 - 0.015 15.0 0.5 0.033 13.9 0.3 1.7 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.1 AJA92285.1 - 0.017 14.8 0.1 0.085 12.6 0.0 2.1 3 0 0 3 3 2 0 Part of AAA domain ATP_bind_1 PF03029.12 AJA92285.1 - 0.02 14.4 0.2 0.037 13.5 0.1 1.6 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.1 AJA92285.1 - 0.02 14.8 0.1 0.037 13.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF258 PF03193.11 AJA92285.1 - 0.02 14.1 0.2 0.033 13.3 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF258 SRPRB PF09439.5 AJA92285.1 - 0.026 13.7 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_24 PF13479.1 AJA92285.1 - 0.03 13.9 1.7 0.11 12.0 1.2 2.0 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.16 AJA92285.1 - 0.032 13.4 0.0 0.065 12.3 0.0 1.5 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.7 AJA92285.1 - 0.041 12.9 0.2 0.13 11.3 0.2 1.9 1 1 1 2 2 2 0 Zeta toxin 6PF2K PF01591.13 AJA92285.1 - 0.048 12.7 0.0 0.064 12.3 0.0 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Viral_helicase1 PF01443.13 AJA92285.1 - 0.082 12.4 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase PRK PF00485.13 AJA92285.1 - 0.1 12.1 0.1 0.22 11.0 0.0 1.6 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_11 PF13086.1 AJA92285.1 - 0.2 11.1 1.6 1.3 8.5 1.1 2.2 1 1 0 1 1 1 0 AAA domain HTH_34 PF13601.1 AJA92286.1 - 0.0062 16.5 0.1 0.0093 15.9 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 AJA92286.1 - 0.013 15.2 0.1 0.02 14.7 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix TrmB PF01978.14 AJA92286.1 - 0.059 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB AphA_like PF14557.1 AJA92286.1 - 0.069 12.6 0.0 0.086 12.3 0.0 1.3 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator FeoC PF09012.5 AJA92286.1 - 0.1 12.3 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator ATP-synt_F PF01990.12 AJA92287.1 - 3.4e-15 56.2 0.0 3.7e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit DUF162 PF02589.10 AJA92287.1 - 0.059 12.8 0.0 0.061 12.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised ACR, YkgG family COG1556 DUF4350 PF14258.1 AJA92287.1 - 0.11 12.7 0.1 0.18 11.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4350) KH_1 PF00013.24 AJA92288.1 - 3.7e-09 36.0 0.7 9.1e-09 34.8 0.1 1.9 2 0 0 2 2 2 1 KH domain KH_3 PF13014.1 AJA92288.1 - 2.9e-05 23.5 0.1 9.5e-05 21.9 0.0 1.9 1 0 0 1 1 1 1 KH domain KH_2 PF07650.12 AJA92288.1 - 0.021 14.3 0.2 0.043 13.3 0.2 1.5 1 0 0 1 1 1 0 KH domain KH_4 PF13083.1 AJA92288.1 - 0.088 12.4 0.0 0.26 10.9 0.0 1.8 1 0 0 1 1 1 0 KH domain APS_kinase PF01583.15 AJA92289.1 - 6.7e-49 165.5 0.0 7.8e-49 165.3 0.0 1.0 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_17 PF13207.1 AJA92289.1 - 2.2e-07 31.7 0.0 3.2e-07 31.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 AJA92289.1 - 3.4e-07 30.2 0.0 4.3e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 AJA92289.1 - 1.1e-05 25.7 0.0 2.3e-05 24.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.5 AJA92289.1 - 0.00053 19.2 0.0 0.00092 18.4 0.0 1.4 2 0 0 2 2 2 1 Chromatin associated protein KTI12 Zeta_toxin PF06414.7 AJA92289.1 - 0.00058 19.0 0.0 0.00079 18.5 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_28 PF13521.1 AJA92289.1 - 0.0031 17.4 0.0 0.0044 16.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 AJA92289.1 - 0.075 12.7 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 NTPase DSPc PF00782.15 AJA92290.1 - 6.1e-20 71.1 0.0 7.2e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.22 AJA92290.1 - 2.1e-11 43.6 0.1 2.6e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.1 AJA92290.1 - 2.8e-06 27.4 0.0 4.4e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase2 PF03162.8 AJA92290.1 - 0.00022 20.6 0.0 0.0003 20.1 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase3 PF13350.1 AJA92290.1 - 0.00049 20.3 0.1 0.0041 17.3 0.0 2.1 1 1 1 2 2 2 1 Tyrosine phosphatase family CDKN3 PF05706.7 AJA92290.1 - 0.013 14.9 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) zf-C2H2_2 PF12756.2 AJA92290.1 - 0.067 13.3 0.6 0.13 12.3 0.4 1.5 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) ChuX_HutX PF06228.8 AJA92291.1 - 5.2e-09 35.6 0.2 5.4e-09 35.5 0.1 1.1 1 0 0 1 1 1 1 Haem utilisation ChuX/HutX HemS PF05171.7 AJA92291.1 - 5.9e-06 26.1 0.1 6.8e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 Haemin-degrading HemS.ChuX domain Na_H_Exchanger PF00999.16 AJA92292.1 - 1.7e-37 128.8 53.3 2.3e-37 128.4 36.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Sulfate_tra_GLY PF13792.1 AJA92292.1 - 1.9 8.1 16.4 0.039 13.6 1.4 3.6 3 0 0 3 3 3 0 Sulfate transporter N-terminal domain with GLY motif Iso_dh PF00180.15 AJA92293.1 - 5.2e-101 338.0 0.2 5.8e-101 337.9 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.7 AJA92293.1 - 0.009 15.2 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA DUF3420 PF11900.3 AJA92293.1 - 0.078 13.0 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) Hemerythrin PF01814.18 AJA92294.1 - 8.1e-10 38.9 7.4 0.00016 21.8 1.8 2.5 2 1 0 2 2 2 2 Hemerythrin HHE cation binding domain DUF2309 PF10070.4 AJA92294.1 - 0.044 11.8 0.3 0.048 11.7 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) DUF2972 PF11186.3 AJA92294.1 - 0.084 12.7 5.3 1.3 8.8 0.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2972) Trp_halogenase PF04820.9 AJA92295.1 - 3.2e-05 22.7 0.0 0.00013 20.7 0.0 1.8 1 1 0 1 1 1 1 Tryptophan halogenase NAD_binding_2 PF03446.10 AJA92295.1 - 0.00074 19.3 0.1 0.0015 18.4 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.11 AJA92295.1 - 0.014 14.8 0.0 0.025 13.9 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.9 AJA92295.1 - 0.014 15.2 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.14 AJA92295.1 - 0.069 12.2 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 AJA92295.1 - 0.12 12.4 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.9 AJA92295.1 - 0.12 11.7 0.0 0.22 10.8 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HTH_24 PF13412.1 AJA92297.1 - 1.8e-11 43.2 1.6 5.8e-06 25.6 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 AJA92297.1 - 7.3e-06 25.5 0.1 0.1 12.3 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 AJA92297.1 - 2.4e-05 23.9 0.0 0.0036 16.9 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.1 AJA92297.1 - 0.00011 22.1 0.2 0.34 10.9 0.1 2.2 2 0 0 2 2 2 2 Winged helix DNA-binding domain TrmB PF01978.14 AJA92297.1 - 0.00022 20.8 3.4 0.08 12.6 0.2 2.6 1 1 2 3 3 3 2 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 AJA92297.1 - 0.00027 20.5 0.1 0.0054 16.4 0.0 2.2 2 0 0 2 2 2 1 MarR family MotA_activ PF09114.5 AJA92297.1 - 0.00078 19.1 0.4 0.0018 17.9 0.3 1.6 1 0 0 1 1 1 1 Transcription factor MotA, activation domain HTH_20 PF12840.2 AJA92297.1 - 0.008 15.9 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HxlR PF01638.12 AJA92297.1 - 0.016 14.7 1.2 2.9 7.5 0.1 2.2 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_45 PF14947.1 AJA92297.1 - 0.031 14.0 0.8 0.094 12.5 0.0 2.0 2 1 0 2 2 2 0 Winged helix-turn-helix DUF387 PF04079.11 AJA92297.1 - 0.033 13.5 0.6 2.6 7.3 0.1 2.4 2 1 0 2 2 2 0 Putative transcriptional regulators (Ypuh-like) PAX PF00292.13 AJA92297.1 - 0.086 12.5 0.6 9.6 5.9 0.1 2.1 1 1 0 2 2 2 0 'Paired box' domain HTH_11 PF08279.7 AJA92297.1 - 0.29 10.8 1.4 3.1 7.5 0.1 2.2 2 0 0 2 2 2 0 HTH domain Nsp1_C PF05064.8 AJA92300.1 - 0.0016 18.1 0.0 0.0022 17.6 0.0 1.2 1 0 0 1 1 1 1 Nsp1-like C-terminal region DUF2854 PF11016.3 AJA92300.1 - 0.046 13.2 0.1 0.083 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) DMRL_synthase PF00885.14 AJA92301.1 - 1.3e-35 122.1 0.8 1.5e-35 122.0 0.6 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Metallophos_3 PF14582.1 AJA92301.1 - 0.0063 15.6 0.0 0.0089 15.2 0.0 1.3 1 0 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily EVE PF01878.13 AJA92302.1 - 1.4e-37 128.8 0.2 1.6e-37 128.6 0.1 1.0 1 0 0 1 1 1 1 EVE domain vATP-synt_E PF01991.13 AJA92303.1 - 3.1e-25 88.6 10.1 5.9e-25 87.7 6.3 1.8 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit DivIVA PF05103.8 AJA92303.1 - 0.027 14.5 9.7 0.37 10.8 1.0 2.2 1 1 1 2 2 2 0 DivIVA protein ATP-synt_B PF00430.13 AJA92303.1 - 0.036 13.8 8.0 0.058 13.2 5.3 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) KxDL PF10241.4 AJA92303.1 - 0.043 13.7 0.6 0.22 11.4 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein AAA_13 PF13166.1 AJA92303.1 - 0.14 10.6 6.6 0.15 10.4 4.6 1.0 1 0 0 1 1 1 0 AAA domain DUF2762 PF10960.3 AJA92303.1 - 0.65 9.7 3.4 1.7 8.3 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2762) DUF3510 PF12022.3 AJA92303.1 - 0.96 9.5 5.0 0.42 10.7 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3510) DUF2564 PF10819.3 AJA92303.1 - 1.4 9.0 4.3 38 4.5 0.3 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2564) tRNA-synt_2b PF00587.20 AJA92304.1 - 1.3e-45 155.0 0.5 3.7e-45 153.6 0.2 1.9 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 AJA92304.1 - 5.2e-16 58.3 0.3 1.5e-15 56.8 0.1 1.9 2 0 0 2 2 2 1 Anticodon binding domain Zn-ribbon_8 PF09723.5 AJA92304.1 - 0.031 14.2 0.4 12 5.9 0.0 2.8 2 0 0 2 2 2 0 Zinc ribbon domain zf-H2C2_2 PF13465.1 AJA92304.1 - 0.19 12.1 1.2 14 6.1 0.0 2.8 2 0 0 2 2 2 0 Zinc-finger double domain YokU PF14122.1 AJA92304.1 - 0.2 11.4 1.7 0.44 10.2 0.0 2.3 2 1 0 3 3 3 0 YokU-like protein NMT1_2 PF13379.1 AJA92305.1 - 1.2e-29 103.4 0.0 1.6e-29 103.0 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 AJA92305.1 - 7.6e-16 58.3 0.0 1.1e-15 57.8 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 AJA92305.1 - 2.8e-08 33.4 0.0 4.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.15 AJA92305.1 - 0.00019 20.7 0.0 0.21 10.7 0.0 2.2 1 1 1 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 ABC2_membrane_3 PF12698.2 AJA92305.1 - 0.19 10.7 6.2 0.56 9.1 4.3 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein LigT_PEase PF02834.11 AJA92306.1 - 1.1e-24 86.2 0.0 7.4e-14 51.4 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.4 AJA92306.1 - 4.6e-16 59.1 0.9 8.2e-16 58.3 0.6 1.3 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.1 AJA92306.1 - 3.5e-10 39.7 0.0 4.4e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily dCMP_cyt_deam_1 PF00383.17 AJA92307.1 - 4e-26 90.6 0.8 5.1e-26 90.2 0.6 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region TctA PF01970.11 AJA92308.1 - 0.059 11.7 0.0 0.06 11.7 0.0 1.0 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family TRM PF02005.11 AJA92309.1 - 8.4e-80 268.4 0.0 9.7e-80 268.2 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase FYVE PF01363.16 AJA92309.1 - 0.0015 18.4 0.3 0.0027 17.5 0.2 1.4 1 0 0 1 1 1 1 FYVE zinc finger HypA PF01155.14 AJA92309.1 - 0.07 12.8 1.4 0.18 11.5 0.9 1.6 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family MTS PF05175.9 AJA92309.1 - 0.085 12.2 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_31 PF13847.1 AJA92309.1 - 0.12 11.9 0.4 0.34 10.4 0.0 1.9 2 1 1 3 3 3 0 Methyltransferase domain RNA_POL_M_15KD PF02150.11 AJA92309.1 - 0.29 10.8 3.6 1.2 8.8 2.5 2.1 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit Sipho_Gp157 PF05565.6 AJA92310.1 - 0.032 13.7 0.6 0.039 13.5 0.4 1.2 1 0 0 1 1 1 0 Siphovirus Gp157 Translin PF01997.11 AJA92311.1 - 1.8e-29 102.7 2.3 2.5e-29 102.3 1.6 1.2 1 0 0 1 1 1 1 Translin family DUF3829 PF12889.2 AJA92311.1 - 0.062 12.4 1.9 0.098 11.8 1.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) AsnC_trans_reg PF01037.16 AJA92312.1 - 2.5e-09 36.7 0.2 2.6e-09 36.6 0.2 1.0 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 AJA92312.1 - 0.00079 19.1 0.0 0.0009 18.9 0.0 1.1 1 0 0 1 1 1 1 GYD domain Mut7-C PF01927.11 AJA92313.1 - 4e-05 23.6 0.0 4.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain AsnC_trans_reg PF01037.16 AJA92314.1 - 6.2e-12 45.0 0.0 7.1e-12 44.8 0.0 1.0 1 0 0 1 1 1 1 AsnC family IlvN PF07991.7 AJA92315.1 - 1.8e-66 222.6 0.3 2.4e-66 222.1 0.2 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 AJA92315.1 - 7.8e-47 158.8 0.1 1.2e-46 158.2 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.14 AJA92315.1 - 8.4e-08 31.5 0.0 1.6e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 AJA92315.1 - 3.6e-07 30.1 0.1 3.2e-06 27.0 0.0 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 AJA92315.1 - 0.00015 22.1 0.1 0.00031 21.1 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.16 AJA92315.1 - 0.0029 17.4 0.1 0.006 16.4 0.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HTH_AsnC-type PF13404.1 AJA92316.1 - 3.3e-14 52.1 0.1 6.7e-14 51.1 0.0 1.6 2 0 0 2 2 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 AJA92316.1 - 6.4e-14 51.4 0.4 1e-13 50.7 0.3 1.3 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 AJA92316.1 - 5e-13 48.2 0.7 5e-13 48.2 0.5 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 AJA92316.1 - 0.00021 20.8 0.2 0.00049 19.6 0.1 1.6 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.11 AJA92316.1 - 0.00085 18.5 0.1 0.0022 17.2 0.0 1.8 2 0 0 2 2 1 1 Sigma-70, region 4 ACT_4 PF13291.1 AJA92316.1 - 0.002 18.4 0.7 2 8.8 0.0 2.2 1 1 1 2 2 2 2 ACT domain Mga PF05043.8 AJA92316.1 - 0.0021 18.2 0.5 0.0072 16.5 0.1 1.8 2 0 0 2 2 2 1 Mga helix-turn-helix domain HTH_IclR PF09339.5 AJA92316.1 - 0.0029 17.1 0.0 0.0053 16.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 AJA92316.1 - 0.0029 16.7 0.0 0.006 15.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.2 AJA92316.1 - 0.0034 17.0 0.2 0.007 16.0 0.0 1.5 2 0 0 2 2 1 1 MarR family HTH_Mga PF08280.6 AJA92316.1 - 0.0088 15.7 0.0 0.022 14.5 0.0 1.6 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain NapD PF03927.8 AJA92316.1 - 0.0089 15.8 0.4 0.045 13.5 0.3 2.0 1 1 0 1 1 1 1 NapD protein HTH_DeoR PF08220.7 AJA92316.1 - 0.0094 15.4 0.4 0.021 14.3 0.1 1.7 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HECT_2 PF09814.4 AJA92316.1 - 0.013 14.2 0.1 0.014 14.1 0.1 1.1 1 0 0 1 1 1 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding HTH_27 PF13463.1 AJA92316.1 - 0.021 15.1 0.2 0.068 13.5 0.0 2.0 2 1 1 3 3 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 AJA92316.1 - 0.029 14.1 0.0 0.065 13.0 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_5 PF01022.15 AJA92316.1 - 0.035 13.7 0.0 0.083 12.5 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family z-alpha PF02295.12 AJA92316.1 - 0.04 13.6 0.0 0.1 12.3 0.0 1.7 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain TrmB PF01978.14 AJA92316.1 - 0.049 13.3 2.3 0.22 11.2 0.3 2.1 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HHH PF00633.18 AJA92316.1 - 0.055 13.1 0.1 0.34 10.7 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif B-block_TFIIIC PF04182.7 AJA92316.1 - 0.065 13.0 0.1 0.49 10.2 0.0 2.2 1 1 1 2 2 2 0 B-block binding subunit of TFIIIC DUF3871 PF12987.2 AJA92316.1 - 0.069 11.8 0.1 0.085 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) GYD PF08734.6 AJA92316.1 - 0.072 12.8 0.1 0.18 11.5 0.0 1.7 1 1 0 1 1 1 0 GYD domain MarR PF01047.17 AJA92316.1 - 0.079 12.6 1.3 0.11 12.2 0.1 1.8 2 0 0 2 2 2 0 MarR family HTH_34 PF13601.1 AJA92316.1 - 0.081 12.9 0.2 0.23 11.4 0.0 1.8 1 1 1 2 2 2 0 Winged helix DNA-binding domain FeoC PF09012.5 AJA92316.1 - 0.14 11.8 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator polyprenyl_synt PF00348.12 AJA92317.1 - 3.1e-41 140.9 0.1 4.2e-41 140.5 0.1 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase Hydrolase_3 PF08282.7 AJA92318.1 - 1.4e-32 113.2 1.6 3.7e-20 72.5 0.2 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.8 AJA92318.1 - 3.9e-09 36.1 0.0 0.00014 21.2 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.21 AJA92318.1 - 0.00051 20.5 0.3 0.14 12.5 0.0 2.3 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.11 AJA92318.1 - 0.0012 17.8 0.0 1.2 8.0 0.0 2.2 2 0 0 2 2 2 2 Trehalose-phosphatase HAD PF12710.2 AJA92318.1 - 0.0015 18.7 3.4 0.026 14.6 0.2 2.8 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 AJA92318.1 - 0.047 13.5 0.0 0.085 12.7 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Ribosomal_S13_N PF08069.7 AJA92319.1 - 4.4e-25 87.2 0.2 8.8e-25 86.3 0.1 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 AJA92319.1 - 8.1e-16 57.5 1.2 1.5e-15 56.7 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein S15 HhH-GPD PF00730.20 AJA92320.1 - 3e-19 69.2 0.0 6.7e-19 68.1 0.0 1.6 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein RIO1 PF01163.17 AJA92320.1 - 2.8e-07 30.0 0.1 5.9e-07 29.0 0.1 1.5 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.20 AJA92320.1 - 2.8e-05 23.4 0.5 5.4e-05 22.4 0.4 1.5 1 0 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.15 AJA92320.1 - 0.014 14.9 0.0 0.23 10.9 0.0 2.6 3 0 0 3 3 3 0 Choline/ethanolamine kinase TMEM51 PF15345.1 AJA92321.1 - 0.00028 20.6 0.0 0.00031 20.5 0.0 1.1 1 0 0 1 1 1 1 Transmembrane protein 51 DUF4345 PF14248.1 AJA92321.1 - 0.0021 17.5 0.0 0.0029 17.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4345) DUF4097 PF13349.1 AJA92321.1 - 0.0053 16.3 1.4 0.076 12.5 0.1 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4097) Tetraspannin PF00335.15 AJA92321.1 - 0.022 14.0 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF4064 PF13273.1 AJA92321.1 - 0.026 14.6 0.2 0.037 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Rnf-Nqr PF02508.9 AJA92321.1 - 0.05 13.1 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein Ribosomal_L44 PF00935.14 AJA92322.1 - 6.6e-25 86.9 8.0 6.6e-25 86.9 5.5 1.4 1 1 1 2 2 2 1 Ribosomal protein L44 zf-ISL3 PF14690.1 AJA92322.1 - 0.03 14.3 5.1 2.4 8.2 1.5 2.5 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Elf1 PF05129.8 AJA92322.1 - 0.03 13.9 1.2 0.73 9.5 0.0 2.2 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like NOB1_Zn_bind PF08772.6 AJA92322.1 - 0.053 13.3 0.4 0.053 13.3 0.3 2.1 1 1 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like RNHCP PF12647.2 AJA92322.1 - 0.066 13.0 3.1 3.8 7.4 2.1 2.1 1 1 0 1 1 1 0 RNHCP domain zf-TFIIB PF13453.1 AJA92322.1 - 0.069 12.3 0.4 1.5 8.1 0.0 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger Cys_rich_KTR PF14205.1 AJA92322.1 - 0.1 12.0 3.2 0.18 11.2 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich KTR zf-piccolo PF05715.8 AJA92322.1 - 0.23 11.4 2.4 2.6 8.1 0.3 2.1 2 0 0 2 2 2 0 Piccolo Zn-finger TFIIS_C PF01096.13 AJA92322.1 - 0.31 10.6 5.0 2.4 7.8 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Rpr2 PF04032.11 AJA92322.1 - 0.33 10.8 3.3 0.49 10.3 2.3 1.3 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-PARP PF00645.13 AJA92322.1 - 0.5 10.6 4.9 4.2 7.6 0.5 2.2 2 0 0 2 2 2 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region Tnp_zf-ribbon_2 PF13842.1 AJA92322.1 - 0.66 10.4 6.3 1.9 8.9 0.2 2.4 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Opy2 PF09463.5 AJA92322.1 - 1.3 9.1 5.7 5.8 7.0 0.2 2.1 2 0 0 2 2 2 0 Opy2 protein DZR PF12773.2 AJA92322.1 - 2.9 7.8 6.0 22 4.9 4.2 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-C4_Topoisom PF01396.14 AJA92322.1 - 3.4 7.2 6.1 5.3 6.6 0.1 2.6 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Ribosomal_S17e PF00833.13 AJA92323.1 - 7.1e-19 67.7 4.5 8.3e-19 67.5 3.1 1.2 1 0 0 1 1 1 1 Ribosomal S17 DUF4525 PF15027.1 AJA92323.1 - 0.028 13.9 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Selenoprotein_S PF06936.6 AJA92323.1 - 0.3 10.6 4.5 0.34 10.4 3.2 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) Cid2 PF09774.4 AJA92323.1 - 0.36 10.9 6.2 0.41 10.7 4.3 1.2 1 0 0 1 1 1 0 Caffeine-induced death protein 2 Nop25 PF09805.4 AJA92323.1 - 0.5 10.4 11.9 0.63 10.1 8.2 1.2 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Mit_KHE1 PF10173.4 AJA92323.1 - 1.2 8.9 4.0 1 9.1 2.2 1.3 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related KH_2 PF07650.12 AJA92324.1 - 1.2e-19 69.6 7.1 2.4e-14 52.6 0.3 2.1 1 1 1 2 2 2 2 KH domain KH_4 PF13083.1 AJA92324.1 - 1.9e-11 43.4 2.5 5.4e-05 22.7 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_5 PF13184.1 AJA92324.1 - 5.8e-09 35.6 1.0 5.8e-09 35.6 0.7 1.8 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 AJA92324.1 - 4.2e-06 26.2 2.8 0.0003 20.3 0.3 2.6 2 1 0 2 2 2 2 KH domain DUF3837 PF12939.2 AJA92324.1 - 0.036 14.0 0.8 0.39 10.7 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) KH_3 PF13014.1 AJA92324.1 - 0.4 10.3 2.6 0.35 10.5 0.2 2.1 2 0 0 2 2 2 0 KH domain Glyphos_transf PF04464.9 AJA92325.1 - 8.8e-12 44.4 3.0 1.5e-11 43.7 1.8 1.4 1 1 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DUF1944 PF09175.5 AJA92325.1 - 0.12 11.9 0.0 0.24 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1944) Ribosomal_L23 PF00276.15 AJA92326.1 - 2.1e-12 46.8 1.1 2.3e-11 43.4 0.7 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 DUF2299 PF10061.4 AJA92328.1 - 0.00012 21.5 0.1 0.00013 21.4 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) zf-C4_Topoisom PF01396.14 AJA92329.1 - 7e-05 22.2 11.5 0.00033 20.0 1.7 2.8 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger Zn-ribbon_8 PF09723.5 AJA92329.1 - 0.013 15.4 1.4 1.4 8.8 0.1 2.6 2 0 0 2 2 2 0 Zinc ribbon domain Phage_Mu_Gam PF07352.7 AJA92329.1 - 0.07 12.6 0.4 0.084 12.3 0.3 1.2 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein Ribosomal_S27e PF01667.12 AJA92329.1 - 0.072 12.6 0.6 0.072 12.6 0.4 2.5 2 0 0 2 2 2 0 Ribosomal protein S27 DUF2614 PF11023.3 AJA92329.1 - 0.11 12.2 0.3 2.6 7.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2614) OS-D PF03392.8 AJA92329.1 - 0.55 10.2 7.3 0.064 13.2 1.5 2.1 2 1 0 2 2 2 0 Insect pheromone-binding family, A10/OS-D Ribosomal_L37ae PF01780.14 AJA92330.1 - 1.6e-18 66.3 1.4 1.8e-18 66.1 0.9 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family OrfB_Zn_ribbon PF07282.6 AJA92330.1 - 0.0016 18.0 0.9 0.0023 17.5 0.6 1.5 1 1 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.2 AJA92330.1 - 0.0029 17.4 0.3 0.0042 16.8 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.5 AJA92330.1 - 0.0056 16.6 1.9 0.065 13.2 0.1 2.1 2 0 0 2 2 2 1 Zinc ribbon domain DNA_ligase_ZBD PF03119.11 AJA92330.1 - 0.0066 16.1 0.7 0.011 15.4 0.5 1.3 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain TF_Zn_Ribbon PF08271.7 AJA92330.1 - 0.0068 15.7 1.9 0.013 14.7 1.3 1.5 1 1 0 1 1 1 1 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 AJA92330.1 - 0.0076 16.0 1.9 0.014 15.2 1.3 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.17 AJA92330.1 - 0.011 15.5 1.3 0.015 14.9 0.9 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) A2L_zn_ribbon PF08792.5 AJA92330.1 - 0.018 14.5 0.7 0.033 13.6 0.5 1.4 1 1 0 1 1 1 0 A2L zinc ribbon domain zf-ribbon_3 PF13248.1 AJA92330.1 - 0.021 14.0 1.7 0.38 10.0 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 AJA92330.1 - 0.048 13.1 3.6 1.7 8.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.1 AJA92330.1 - 0.053 13.2 1.6 0.096 12.4 1.1 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-C4_Topoisom PF01396.14 AJA92330.1 - 0.059 12.8 3.6 0.079 12.4 0.3 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger UPF0547 PF10571.4 AJA92330.1 - 0.078 12.6 3.8 0.13 12.0 2.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Rep_fac-A_C PF08646.5 AJA92330.1 - 0.099 12.3 0.5 0.098 12.3 0.4 1.2 1 0 0 1 1 1 0 Replication factor-A C terminal domain DUF2039 PF10217.4 AJA92330.1 - 0.11 12.5 0.5 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) ADK_lid PF05191.9 AJA92330.1 - 0.11 12.1 1.6 1.1 9.0 0.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-C2H2_3 PF13878.1 AJA92330.1 - 0.12 12.0 0.9 11 5.7 0.0 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-C3HC4_3 PF13920.1 AJA92330.1 - 0.12 12.0 1.7 1 9.1 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-tcix PF14952.1 AJA92330.1 - 0.16 11.3 6.2 0.98 8.8 0.6 2.4 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DUF3797 PF12677.2 AJA92330.1 - 0.17 11.5 3.6 0.37 10.4 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Nudix_N_2 PF14803.1 AJA92330.1 - 0.19 11.4 2.9 0.64 9.7 0.2 2.1 2 0 0 2 2 2 0 Nudix N-terminal YhfH PF14149.1 AJA92330.1 - 0.3 10.9 3.2 5.4 6.8 0.3 2.2 2 0 0 2 2 2 0 YhfH-like protein DnaJ_CXXCXGXG PF00684.14 AJA92330.1 - 0.65 10.0 3.5 1.4 9.0 2.5 1.5 1 1 0 1 1 1 0 DnaJ central domain zf-Mss51 PF13824.1 AJA92330.1 - 0.69 9.8 3.5 2.8 7.8 0.3 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF4379 PF14311.1 AJA92330.1 - 0.73 9.6 3.6 10 6.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zf-ISL3 PF14690.1 AJA92330.1 - 0.84 9.7 4.4 3.5 7.7 0.2 2.6 3 0 0 3 3 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-TFIIB PF13453.1 AJA92330.1 - 1.2 8.3 4.7 14 4.9 3.3 2.1 1 1 0 1 1 1 0 Transcription factor zinc-finger Auto_anti-p27 PF06677.7 AJA92330.1 - 1.3 8.8 5.0 8.1 6.2 3.6 2.0 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_RNApol_7kD PF03604.8 AJA92330.1 - 2.1 7.8 5.2 14 5.2 3.2 2.2 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-IS66 PF13005.2 AJA92330.1 - 4.5 7.3 8.1 2.5 8.1 1.0 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 DUF1610 PF07754.6 AJA92330.1 - 8.5 6.5 9.3 18 5.5 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) PAT1 PF09770.4 AJA92331.1 - 0.046 11.9 0.0 0.058 11.6 0.0 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 tRNA-synt_2c PF01411.14 AJA92332.1 - 4.1e-83 279.5 0.0 8.9e-83 278.4 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 AJA92332.1 - 2.4e-16 59.3 1.2 9.2e-16 57.4 0.8 2.1 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 AJA92332.1 - 2.5e-06 27.0 2.3 6.1e-06 25.8 1.6 1.7 1 0 0 1 1 1 1 DHHA1 domain UbiA PF01040.13 AJA92333.1 - 6.3e-31 107.5 21.5 8.4e-31 107.1 14.9 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF3488 PF11992.3 AJA92333.1 - 0.15 10.7 2.7 0.22 10.1 1.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) Aconitase_C PF00694.14 AJA92335.1 - 9.4e-23 80.7 0.2 6.2e-22 78.1 0.0 2.2 2 1 0 2 2 2 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 AJA92335.1 - 0.015 14.7 0.3 0.092 12.1 0.2 2.0 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus TrmB PF01978.14 AJA92336.1 - 6.2e-05 22.6 0.1 7.9e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 AJA92336.1 - 0.00012 21.6 0.0 0.00015 21.3 0.0 1.2 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.14 AJA92336.1 - 0.0011 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.2 AJA92336.1 - 0.0024 17.6 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 AJA92336.1 - 0.003 16.8 0.1 0.0043 16.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding FUR PF01475.14 AJA92336.1 - 0.0044 16.9 0.0 0.0057 16.5 0.0 1.3 1 0 0 1 1 1 1 Ferric uptake regulator family DUF2250 PF10007.4 AJA92336.1 - 0.0044 16.8 0.1 0.0052 16.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_34 PF13601.1 AJA92336.1 - 0.007 16.3 0.1 0.0086 16.0 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.1 AJA92336.1 - 0.0097 15.4 0.1 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) MarR_2 PF12802.2 AJA92336.1 - 0.013 15.1 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.10 AJA92336.1 - 0.014 15.2 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.15 AJA92336.1 - 0.031 13.9 0.1 0.047 13.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_30 PF13556.1 AJA92336.1 - 0.036 13.6 0.0 0.074 12.6 0.0 1.5 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain TFIIE_alpha PF02002.12 AJA92336.1 - 0.04 13.4 0.1 0.047 13.1 0.1 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit Sigma70_r4_2 PF08281.7 AJA92336.1 - 0.044 13.2 0.1 0.11 11.9 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 PadR PF03551.9 AJA92336.1 - 0.049 13.4 0.0 0.063 13.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_28 PF13518.1 AJA92336.1 - 0.049 13.6 0.0 0.081 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain UPF0122 PF04297.9 AJA92336.1 - 0.051 13.5 0.3 0.12 12.3 0.2 1.7 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_23 PF13384.1 AJA92336.1 - 0.13 11.9 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Oxidored_q6 PF01058.17 AJA92337.1 - 1.7e-24 85.9 0.1 2.3e-24 85.4 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF309 PF03745.9 AJA92338.1 - 8.4e-20 69.9 0.1 1.4e-19 69.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF309) rve_2 PF13333.1 AJA92338.1 - 0.14 12.2 0.3 0.39 10.8 0.0 1.9 2 0 0 2 2 2 0 Integrase core domain GCD14 PF08704.5 AJA92339.1 - 8.1e-34 117.2 0.0 1.1e-33 116.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.1 AJA92339.1 - 6e-14 51.8 0.0 8.8e-14 51.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 AJA92339.1 - 3.2e-10 39.8 0.1 4.6e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.13 AJA92339.1 - 2.1e-09 36.8 0.1 4e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 AJA92339.1 - 2.2e-09 37.8 0.0 3.6e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.1 AJA92339.1 - 4e-08 34.0 0.0 9.8e-08 32.7 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 AJA92339.1 - 9.2e-07 28.9 0.0 7.7e-06 25.9 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 AJA92339.1 - 2.6e-05 23.6 0.0 0.00011 21.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase small domain RrnaAD PF00398.15 AJA92339.1 - 2.8e-05 23.3 0.0 3.7e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_3 PF01596.12 AJA92339.1 - 3e-05 23.1 0.0 4.3e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_11 PF08241.7 AJA92339.1 - 3.5e-05 24.2 0.0 0.0001 22.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92339.1 - 6.5e-05 23.3 0.0 0.00021 21.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 AJA92339.1 - 8.9e-05 21.7 0.0 0.00012 21.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_16 PF10294.4 AJA92339.1 - 0.00011 21.6 0.0 0.00017 21.0 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.1 AJA92339.1 - 0.00015 21.4 0.0 0.00031 20.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92339.1 - 0.0029 17.9 0.0 0.0057 17.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain DUF3115 PF11312.3 AJA92339.1 - 0.0047 15.8 0.0 0.0057 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3115) Fibrillarin PF01269.12 AJA92339.1 - 0.011 14.6 0.0 0.018 13.9 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin FtsJ PF01728.14 AJA92339.1 - 0.021 14.8 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase UPF0020 PF01170.13 AJA92339.1 - 0.047 13.2 0.0 0.069 12.7 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Met_10 PF02475.11 AJA92339.1 - 0.06 12.9 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Met-10+ like-protein PfkB PF00294.19 AJA92340.1 - 1.9e-23 83.0 0.4 3.7e-23 82.1 0.3 1.4 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 AJA92340.1 - 5.7e-05 22.4 0.2 0.00013 21.3 0.0 1.6 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase DUF3714 PF12508.3 AJA92341.1 - 0.081 12.3 0.3 0.12 11.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3714) ATP-synt_E_2 PF08112.6 AJA92341.1 - 0.22 11.6 5.5 0.24 11.4 3.8 1.1 1 0 0 1 1 1 0 ATP synthase epsilon subunit UPF0181 PF03701.9 AJA92341.1 - 0.48 9.7 0.1 0.48 9.7 0.1 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0181) IFP_35_N PF07334.8 AJA92341.1 - 1.3 9.0 4.6 1.2 9.1 2.9 1.3 1 1 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF4399 PF14347.1 AJA92342.1 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) Ribosomal_S28e PF01200.13 AJA92343.1 - 9.4e-26 89.3 4.5 1.1e-25 89.1 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Peptidase_M1 PF01433.15 AJA92344.1 - 8.5e-136 453.0 2.1 1.5e-135 452.2 1.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 ERAP1_C PF11838.3 AJA92344.1 - 1.8e-55 188.4 3.7 2.8e-55 187.8 1.1 2.1 2 0 0 2 2 2 1 ERAP1-like C-terminal domain Peptidase_MA_2 PF13485.1 AJA92344.1 - 1.2e-18 67.4 0.0 2.5e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 Peptidase MA superfamily zinc_ribbon_2 PF13240.1 AJA92345.1 - 1.9e-07 30.3 5.0 3.1e-07 29.6 3.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA92345.1 - 1.3e-06 27.3 4.5 2.4e-06 26.5 3.1 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 AJA92345.1 - 2.8e-05 23.8 0.9 4.2e-05 23.2 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon YhfH PF14149.1 AJA92345.1 - 1.6 8.5 7.7 17 5.3 0.7 3.1 2 1 1 3 3 3 0 YhfH-like protein Peptidase_M17 PF00883.16 AJA92346.1 - 1.7e-114 381.9 0.3 2.2e-114 381.5 0.2 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.12 AJA92346.1 - 3.8e-19 68.6 0.1 9.2e-19 67.4 0.1 1.7 1 0 0 1 1 1 1 Cytosol aminopeptidase family, N-terminal domain UPF0172 PF03665.8 AJA92346.1 - 0.012 15.0 0.2 0.027 13.9 0.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) SnoaL_3 PF13474.1 AJA92347.1 - 2e-05 24.6 0.0 2.7e-05 24.1 0.0 1.4 1 1 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.5 AJA92347.1 - 0.003 17.4 0.2 0.0066 16.3 0.1 1.7 1 1 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II Association DUF4440 PF14534.1 AJA92347.1 - 0.08 13.1 0.0 0.084 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) Lysine_decarbox PF03641.9 AJA92348.1 - 2.1e-05 24.3 0.0 3.5e-05 23.6 0.0 1.6 1 1 0 1 1 1 1 Possible lysine decarboxylase DNA_processg_A PF02481.10 AJA92348.1 - 0.0033 16.3 0.1 0.17 10.7 0.1 2.1 2 0 0 2 2 2 2 DNA recombination-mediator protein A DAGK_cat PF00781.19 AJA92348.1 - 0.018 14.4 1.6 0.22 10.9 0.0 2.2 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain Sod_Fe_C PF02777.13 AJA92349.1 - 2.3e-43 146.3 0.2 4.7e-43 145.3 0.1 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 AJA92349.1 - 1.9e-29 101.7 0.9 3.1e-29 101.0 0.7 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DNA_gyraseB PF00204.20 AJA92349.1 - 0.0076 15.4 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 DNA gyrase B Ribosomal_L15e PF00827.12 AJA92350.1 - 1.2e-43 148.9 5.0 1.4e-43 148.6 3.5 1.0 1 0 0 1 1 1 1 Ribosomal L15 DUF367 PF04034.8 AJA92351.1 - 4.1e-34 116.9 0.0 5.3e-34 116.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 AJA92351.1 - 6.6e-07 28.8 0.1 1.3e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI DUF1847 PF08901.6 AJA92351.1 - 0.098 12.1 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) Lyase_1 PF00206.15 AJA92352.1 - 1.2e-50 172.4 0.0 2.3e-50 171.5 0.0 1.5 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 AJA92352.1 - 2.7e-15 56.1 0.0 1.2e-13 50.9 0.0 2.8 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Aconitase PF00330.15 AJA92353.1 - 5.2e-80 269.1 3.2 4e-53 180.5 0.3 2.1 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) FBPase_3 PF01950.11 AJA92354.1 - 1.2e-153 511.4 0.1 1.3e-153 511.3 0.1 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Ribosomal_L6 PF00347.18 AJA92355.1 - 7.8e-14 51.9 5.8 1e-07 32.3 0.4 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 DUF3244 PF11589.3 AJA92355.1 - 0.033 13.8 0.1 9 6.0 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3244) BON PF04972.12 AJA92355.1 - 0.061 13.0 2.4 9.9 6.0 0.2 4.1 4 1 1 5 5 5 0 BON domain FMN_red PF03358.10 AJA92356.1 - 3.2e-26 91.6 0.0 3.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 AJA92356.1 - 5.2e-11 42.4 0.0 7.3e-11 41.9 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold Flp_Fap PF04964.9 AJA92356.1 - 0.078 12.5 0.6 5.2 6.7 0.1 2.5 2 0 0 2 2 2 0 Flp/Fap pilin component PS_pyruv_trans PF04230.8 AJA92356.1 - 0.091 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase Pentapeptide PF00805.17 AJA92357.1 - 7e-98 318.8 70.7 3e-14 51.8 1.2 14.9 5 4 11 17 17 17 17 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.1 AJA92357.1 - 9.4e-74 243.2 57.2 1.4e-13 50.4 2.3 8.9 1 1 8 9 9 9 9 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 AJA92357.1 - 4.7e-55 183.2 25.1 2.3e-05 24.2 2.8 13.1 2 2 10 12 12 12 11 Pentapeptide repeats (9 copies) CfAFP PF05264.6 AJA92357.1 - 2.6e-05 24.0 9.7 0.71 9.6 0.0 5.4 1 1 5 7 7 7 3 Choristoneura fumiferana antifreeze protein (CfAFP) DZR PF12773.2 AJA92358.1 - 5.2e-06 26.1 7.9 7.7e-05 22.4 0.8 2.5 2 1 0 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.1 AJA92358.1 - 2.8e-05 23.1 4.2 2.8e-05 23.1 2.9 2.0 2 0 0 2 2 2 1 zinc-ribbon domain PRC PF05239.11 AJA92358.1 - 0.00027 20.7 1.5 0.0011 18.7 1.0 1.9 1 1 0 1 1 1 1 PRC-barrel domain zinc_ribbon_2 PF13240.1 AJA92358.1 - 0.00032 20.0 4.5 0.00084 18.7 3.1 1.8 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.13 AJA92358.1 - 0.012 14.6 3.7 0.012 14.6 2.6 2.3 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others DUF2199 PF09965.4 AJA92358.1 - 0.019 14.7 0.3 0.1 12.4 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2199) Zn_Tnp_IS1595 PF12760.2 AJA92358.1 - 0.92 9.3 7.2 36 4.2 0.0 3.7 3 1 0 3 3 3 0 Transposase zinc-ribbon domain zinc-ribbons_6 PF07191.7 AJA92358.1 - 0.96 9.2 7.6 6.5 6.6 0.3 3.0 2 1 0 2 2 2 0 zinc-ribbons Gin PF10764.4 AJA92358.1 - 6.2 6.6 7.5 22 4.8 0.0 3.1 3 0 0 3 3 3 0 Inhibitor of sigma-G Gin zf-B_box PF00643.19 AJA92358.1 - 9.1 6.2 8.8 5 7.0 0.6 3.0 3 0 0 3 3 3 0 B-box zinc finger AhpC-TSA PF00578.16 AJA92359.1 - 1.1e-32 112.2 0.1 1.3e-32 112.0 0.1 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92359.1 - 2.6e-21 75.7 0.1 2.9e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.9 AJA92359.1 - 0.03 13.9 0.1 0.038 13.6 0.1 1.2 1 0 0 1 1 1 0 SCO1/SenC Fer4 PF00037.22 AJA92360.1 - 6.2e-12 44.5 10.8 2.6e-09 36.2 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 AJA92360.1 - 4.6e-10 39.1 17.2 3e-07 30.1 6.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 AJA92360.1 - 1.4e-09 38.2 6.7 2.3e-09 37.5 4.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 AJA92360.1 - 3e-08 33.1 10.6 6.8e-05 22.5 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 AJA92360.1 - 6.5e-08 32.3 20.2 2.9e-05 23.8 7.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 AJA92360.1 - 3e-07 30.6 2.5 0.0021 18.3 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 AJA92360.1 - 3.9e-06 27.0 8.5 2.2e-05 24.5 6.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 AJA92360.1 - 4.2e-06 27.3 15.7 0.00023 21.8 5.6 1.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 AJA92360.1 - 5.1e-06 26.1 1.8 5.1e-06 26.1 1.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.1 AJA92360.1 - 7e-06 25.9 7.3 0.00062 19.7 7.2 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 AJA92360.1 - 3.2e-05 23.9 9.2 0.0026 17.9 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 AJA92360.1 - 0.00011 22.7 2.6 0.065 13.7 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 AJA92360.1 - 0.003 17.9 17.3 0.0057 17.1 2.8 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.1 AJA92360.1 - 0.0086 16.4 12.1 0.013 15.9 0.9 2.3 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 AJA92360.1 - 0.011 16.0 7.3 0.13 12.6 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain Cytochrom_B_N_2 PF13631.1 AJA92361.1 - 3.1e-24 85.6 8.8 3.1e-24 85.6 6.1 3.8 3 1 1 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.12 AJA92361.1 - 3.8e-08 33.4 2.0 3.8e-08 33.4 1.4 3.3 5 0 0 5 5 5 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.1 AJA92361.1 - 0.0047 17.0 2.7 0.0047 17.0 1.9 3.6 4 0 0 4 4 4 1 Domain of unknown function (DUF4405) TPR_1 PF00515.23 AJA92363.1 - 1.1e-11 43.7 3.5 3.2e-05 23.3 0.2 3.9 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92363.1 - 2.6e-10 39.3 1.9 0.00037 20.0 0.3 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92363.1 - 1.1e-09 37.7 0.1 8.7e-06 25.2 0.0 2.2 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.12 AJA92363.1 - 9.8e-09 34.4 0.1 0.0093 15.8 0.0 3.6 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92363.1 - 0.00057 20.1 0.0 0.035 14.4 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92363.1 - 0.00089 19.1 0.0 0.18 11.7 0.0 2.6 1 1 1 2 2 2 1 Tetratricopeptide repeat Apc3 PF12895.2 AJA92363.1 - 0.0044 17.1 0.2 0.064 13.3 0.2 2.2 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF1240 PF06836.7 AJA92363.1 - 0.04 14.1 0.1 0.052 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1240) TPR_14 PF13428.1 AJA92363.1 - 0.093 13.4 0.0 3.3 8.5 0.0 2.7 1 1 2 3 3 3 0 Tetratricopeptide repeat Ribosomal_S30 PF04758.9 AJA92364.1 - 2.8e-10 39.7 2.8 6.4e-10 38.6 2.0 1.6 1 1 0 1 1 1 1 Ribosomal protein S30 MafB19-deam PF14437.1 AJA92364.1 - 0.055 13.1 0.0 0.058 13.0 0.0 1.1 1 0 0 1 1 1 0 MafB19-like deaminase AA_permease_2 PF13520.1 AJA92365.1 - 5.3e-44 150.4 55.1 8.4e-44 149.7 38.2 1.3 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 AJA92365.1 - 2.4e-37 128.4 47.6 3e-37 128.0 33.0 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.21 AJA92365.1 - 3e-08 33.9 0.0 0.00012 22.3 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family AA_permease_C PF13906.1 AJA92365.1 - 1e-07 31.6 4.5 1e-07 31.6 3.1 3.6 5 0 0 5 5 5 1 C-terminus of AA_permease RseC_MucC PF04246.7 AJA92365.1 - 0.034 13.7 0.4 0.034 13.7 0.3 4.1 4 0 0 4 4 4 0 Positive regulator of sigma(E), RseC/MucC DUF2560 PF10834.3 AJA92365.1 - 0.078 12.9 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) FGE-sulfatase PF03781.11 AJA92366.1 - 1.9e-45 155.2 2.0 2.7e-45 154.7 1.4 1.2 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DinB_2 PF12867.2 AJA92366.1 - 5.9e-14 52.4 0.2 1.4e-13 51.3 0.0 1.7 2 0 0 2 2 2 1 DinB superfamily E3_UbLigase_R4 PF13764.1 AJA92366.1 - 0.27 9.0 0.6 0.42 8.4 0.4 1.2 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase UBR4 CTP_transf_2 PF01467.21 AJA92367.1 - 1.2e-14 54.6 0.2 1.8e-14 54.1 0.1 1.3 1 0 0 1 1 1 1 Cytidylyltransferase Citrate_ly_lig PF08218.6 AJA92367.1 - 0.041 13.3 0.0 0.29 10.5 0.0 2.0 2 0 0 2 2 2 0 Citrate lyase ligase C-terminal domain Peptidase_M20 PF01546.23 AJA92368.1 - 9.5e-28 96.9 0.0 1.3e-27 96.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 AJA92368.1 - 5.1e-19 68.0 0.0 9.9e-19 67.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain WG_beta_rep PF14903.1 AJA92368.1 - 0.06 13.6 0.8 0.75 10.1 0.1 2.7 2 0 0 2 2 2 0 WG containing repeat EnY2 PF10163.4 AJA92368.1 - 0.12 12.3 0.0 2.6 8.0 0.0 2.4 2 0 0 2 2 2 0 Transcription factor e(y)2 Aminotran_4 PF01063.14 AJA92369.1 - 5.7e-49 166.6 0.0 6.6e-49 166.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class IV Radical_SAM PF04055.16 AJA92370.1 - 5.1e-12 46.2 0.0 1.1e-11 45.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 AJA92370.1 - 0.0071 16.2 0.1 0.021 14.6 0.1 1.8 1 1 0 1 1 1 1 B12 binding domain Aminotran_1_2 PF00155.16 AJA92371.1 - 1.3e-59 201.9 0.0 1.6e-59 201.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 AJA92371.1 - 4.8e-08 32.1 0.0 7.8e-08 31.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 AJA92371.1 - 5.9e-08 32.1 0.0 8.5e-08 31.6 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 AJA92371.1 - 1.1e-05 23.9 0.0 1.6e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF4116 PF13475.1 AJA92371.1 - 0.0065 15.9 0.5 0.91 9.0 0.1 2.6 1 1 1 2 2 2 1 Domain of unknown function (DUF4116) Beta_elim_lyase PF01212.16 AJA92371.1 - 0.013 14.6 0.0 0.04 13.0 0.0 1.7 1 1 0 1 1 1 0 Beta-eliminating lyase DUF2711 PF10924.3 AJA92371.1 - 0.11 11.9 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2711) CcmD PF04995.9 AJA92372.1 - 0.0038 16.9 0.3 0.0053 16.4 0.2 1.2 1 0 0 1 1 1 1 Heme exporter protein D (CcmD) PRP3 PF08572.5 AJA92372.1 - 0.78 9.0 5.4 0.9 8.8 3.8 1.1 1 0 0 1 1 1 0 pre-mRNA processing factor 3 (PRP3) UreD PF01774.12 AJA92373.1 - 1.7e-46 158.3 0.0 1.9e-46 158.1 0.0 1.0 1 0 0 1 1 1 1 UreD urease accessory protein Gemini_C4 PF01492.12 AJA92373.1 - 0.13 12.0 1.1 6.2 6.6 0.1 2.6 2 1 0 2 2 2 0 Geminivirus C4 protein Cdc6_C PF09079.6 AJA92374.1 - 3.9e-20 71.3 0.3 9e-20 70.2 0.2 1.6 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 AJA92374.1 - 4.9e-14 52.6 0.3 1.4e-13 51.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 AJA92374.1 - 3.6e-11 43.4 0.0 2.3e-10 40.7 0.0 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 AJA92374.1 - 2.2e-10 40.8 0.9 9.4e-10 38.7 0.0 2.4 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 AJA92374.1 - 1.7e-06 27.8 0.1 5e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 NACHT domain KAP_NTPase PF07693.9 AJA92374.1 - 6.6e-05 22.0 0.4 0.3 10.0 0.0 2.4 1 1 1 2 2 2 2 KAP family P-loop domain Arch_ATPase PF01637.13 AJA92374.1 - 6.7e-05 22.7 0.3 6.7e-05 22.7 0.2 1.9 2 1 0 2 2 2 1 Archaeal ATPase PIF1 PF05970.9 AJA92374.1 - 0.00025 20.1 0.1 0.00093 18.2 0.0 1.9 3 0 0 3 3 3 1 PIF1-like helicase DUF2075 PF09848.4 AJA92374.1 - 0.00035 19.6 0.0 0.00057 18.9 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.17 AJA92374.1 - 0.00039 19.3 0.1 0.0015 17.4 0.0 1.9 2 0 0 2 2 2 1 NB-ARC domain AAA_32 PF13654.1 AJA92374.1 - 0.00094 17.9 0.9 0.071 11.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.9 AJA92374.1 - 0.0011 18.6 1.3 0.0088 15.7 0.3 2.8 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.10 AJA92374.1 - 0.0017 18.0 2.2 0.0055 16.4 0.9 2.3 2 1 0 2 2 1 1 NTPase TrwB_AAD_bind PF10412.4 AJA92374.1 - 0.0025 16.4 0.2 0.015 13.9 0.0 2.0 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain DUF359 PF04019.7 AJA92374.1 - 0.0028 17.0 0.7 1.9 7.9 0.0 2.9 2 1 0 2 2 2 1 Protein of unknown function (DUF359) AAA_24 PF13479.1 AJA92374.1 - 0.0029 17.2 0.5 0.0079 15.8 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 AJA92374.1 - 0.0041 16.8 0.0 0.012 15.3 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain DUF815 PF05673.8 AJA92374.1 - 0.0057 15.6 0.0 0.011 14.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RNA_helicase PF00910.17 AJA92374.1 - 0.013 15.6 0.0 0.039 14.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase T2SE PF00437.15 AJA92374.1 - 0.013 14.3 0.2 0.044 12.6 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein KaiC PF06745.8 AJA92374.1 - 0.014 14.5 0.8 0.13 11.4 0.6 2.4 1 1 0 1 1 1 0 KaiC Phage-MuB_C PF09077.6 AJA92374.1 - 0.017 14.8 0.5 0.056 13.1 0.1 2.1 2 0 0 2 2 1 0 Mu B transposition protein, C terminal Rad17 PF03215.10 AJA92374.1 - 0.02 13.6 0.0 0.049 12.3 0.0 1.6 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_11 PF13086.1 AJA92374.1 - 0.031 13.8 2.5 0.083 12.4 1.7 1.8 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 AJA92374.1 - 0.09 11.9 0.0 0.21 10.7 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SF PF00482.18 AJA92374.1 - 0.11 12.3 1.3 0.99 9.3 0.7 2.6 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F AAA_25 PF13481.1 AJA92374.1 - 0.15 11.4 0.7 1.2 8.4 0.0 2.7 3 1 1 4 4 4 0 AAA domain AAA_33 PF13671.1 AJA92374.1 - 0.39 10.5 1.9 3.8 7.3 1.3 2.4 1 1 0 1 1 1 0 AAA domain Complex1_30kDa PF00329.14 AJA92375.1 - 2.6e-26 91.8 0.1 7.5e-26 90.3 0.0 1.7 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NapD PF03927.8 AJA92376.1 - 0.042 13.6 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 NapD protein Hydrolase_3 PF08282.7 AJA92376.1 - 0.077 12.5 0.5 0.084 12.4 0.3 1.0 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Ribosomal_L18e PF00828.14 AJA92377.1 - 4.6e-11 43.2 1.3 5.9e-11 42.8 0.9 1.3 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Rab5ip PF07019.7 AJA92378.1 - 0.0018 18.3 5.8 0.052 13.6 2.5 2.1 2 0 0 2 2 2 1 Rab5-interacting protein (Rab5ip) TctB PF07331.6 AJA92378.1 - 0.0021 17.7 0.1 0.0029 17.2 0.0 1.2 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Trypan_PARP PF05887.6 AJA92378.1 - 0.0027 17.5 4.1 0.0035 17.1 2.9 1.2 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) DUF979 PF06166.7 AJA92378.1 - 0.006 15.5 0.0 0.0077 15.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF979) DNA_pol_phi PF04931.8 AJA92378.1 - 0.0063 14.3 3.1 0.0083 13.9 2.2 1.1 1 0 0 1 1 1 1 DNA polymerase phi DUF3021 PF11457.3 AJA92378.1 - 0.011 15.6 3.4 0.013 15.3 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) NESP55 PF06390.7 AJA92378.1 - 0.045 13.1 4.0 0.062 12.6 2.8 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) DUF2512 PF10710.4 AJA92378.1 - 0.077 12.4 2.5 0.12 11.7 1.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) Polysacc_synt_C PF14667.1 AJA92378.1 - 0.29 10.9 6.5 0.11 12.2 2.5 1.6 2 0 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain Rer1 PF03248.8 AJA92378.1 - 0.77 9.3 5.3 0.96 9.0 0.3 2.5 1 1 1 2 2 2 0 Rer1 family TIM PF00121.13 AJA92379.1 - 4.3e-28 98.0 6.1 6.2e-26 90.9 4.2 2.0 1 1 0 1 1 1 1 Triosephosphate isomerase IGPS PF00218.16 AJA92379.1 - 0.0001 21.4 0.1 0.00017 20.7 0.0 1.3 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase ThiG PF05690.9 AJA92379.1 - 0.0014 17.7 0.1 0.0034 16.4 0.1 1.6 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG Autoind_synth PF00765.12 AJA92379.1 - 0.029 13.6 0.0 0.045 12.9 0.0 1.3 1 0 0 1 1 1 0 Autoinducer synthetase FMN_dh PF01070.13 AJA92379.1 - 0.041 12.7 1.6 0.041 12.7 0.1 1.7 2 1 0 2 2 2 0 FMN-dependent dehydrogenase PcrB PF01884.12 AJA92379.1 - 0.063 12.5 2.9 0.37 9.9 0.1 2.7 3 0 0 3 3 3 0 PcrB family DUF561 PF04481.7 AJA92379.1 - 0.47 9.3 6.8 2.2 7.1 4.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF561) HTH_24 PF13412.1 AJA92380.1 - 5.5e-16 57.6 0.1 7.2e-11 41.3 0.1 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 AJA92380.1 - 1.1e-10 41.0 0.0 2.6e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_34 PF13601.1 AJA92380.1 - 9.6e-10 38.3 0.3 0.00076 19.4 0.0 2.2 2 0 0 2 2 2 2 Winged helix DNA-binding domain MarR PF01047.17 AJA92380.1 - 8.2e-09 35.0 0.1 0.00098 18.7 0.0 2.2 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 AJA92380.1 - 1.2e-08 34.4 0.5 6.2e-05 22.6 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 AJA92380.1 - 9.3e-06 25.3 0.0 0.031 14.0 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.2 AJA92380.1 - 1.1e-05 25.0 0.0 0.015 14.9 0.0 2.3 2 0 0 2 2 2 2 MarR family HxlR PF01638.12 AJA92380.1 - 0.00027 20.5 0.2 0.011 15.3 0.1 2.2 1 1 1 2 2 2 1 HxlR-like helix-turn-helix HTH_45 PF14947.1 AJA92380.1 - 0.0003 20.5 0.4 0.075 12.8 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_27 PF13463.1 AJA92380.1 - 0.00062 20.0 0.0 0.11 12.8 0.0 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain FaeA PF04703.7 AJA92380.1 - 0.0037 17.3 0.0 1 9.5 0.0 2.2 2 0 0 2 2 2 1 FaeA-like protein HTH_IclR PF09339.5 AJA92380.1 - 0.0044 16.5 0.0 0.25 10.9 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.15 AJA92380.1 - 0.006 16.6 0.2 0.24 11.5 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator RNA_pol_Rpc34 PF05158.7 AJA92380.1 - 0.016 14.4 1.1 0.12 11.5 0.1 2.0 2 0 0 2 2 2 0 RNA polymerase Rpc34 subunit Penicillinase_R PF03965.11 AJA92380.1 - 0.038 14.0 1.0 1.2 9.2 0.1 2.5 1 1 1 2 2 2 0 Penicillinase repressor Fe_dep_repress PF01325.14 AJA92380.1 - 0.041 13.8 0.5 1.5 8.8 0.0 2.7 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain RPA_C PF08784.6 AJA92380.1 - 0.046 14.1 0.0 1.2 9.6 0.0 2.3 1 1 1 2 2 2 0 Replication protein A C terminal MerR_2 PF13591.1 AJA92380.1 - 0.049 13.2 0.1 0.77 9.3 0.0 2.2 2 0 0 2 2 2 0 MerR HTH family regulatory protein TFIIE_alpha PF02002.12 AJA92380.1 - 0.068 12.6 0.4 0.19 11.2 0.1 1.8 1 1 1 2 2 2 0 TFIIE alpha subunit UPF0128 PF03673.8 AJA92380.1 - 0.075 12.3 0.2 0.095 11.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) RP-C PF03428.8 AJA92380.1 - 0.084 12.3 0.0 0.23 10.8 0.0 1.7 2 0 0 2 2 2 0 Replication protein C N-terminal domain RNR_N PF08343.5 AJA92380.1 - 0.092 12.5 0.5 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal MGDG_synth PF06925.6 AJA92380.1 - 0.11 12.3 0.1 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase HTH_40 PF14493.1 AJA92380.1 - 0.11 12.6 0.0 0.4 10.9 0.0 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain UPF0104 PF03706.8 AJA92381.1 - 1.4e-23 83.6 22.5 2e-23 83.1 15.6 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) DUF1218 PF06749.7 AJA92381.1 - 0.32 11.4 5.5 0.33 11.4 0.3 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1218) CoA_binding PF02629.14 AJA92382.1 - 2.1e-22 79.4 2.4 1.6e-21 76.6 0.3 2.4 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.14 AJA92382.1 - 1.3e-09 37.7 0.2 2.4e-09 36.9 0.1 1.4 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.1 AJA92382.1 - 2.1e-06 27.3 0.0 3.6e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 AJA92382.1 - 7.1e-06 26.1 0.1 1.3e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 CoA binding domain GFO_IDH_MocA PF01408.17 AJA92382.1 - 8.7e-06 26.2 0.2 2.5e-05 24.7 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.7 AJA92382.1 - 0.00063 19.1 0.5 0.0011 18.3 0.4 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain AsnC_trans_reg PF01037.16 AJA92383.1 - 3.6e-09 36.2 0.2 4e-09 36.0 0.1 1.0 1 0 0 1 1 1 1 AsnC family Ribosom_S12_S23 PF00164.20 AJA92384.1 - 1.5e-39 134.1 0.4 1.8e-39 133.9 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Methyltransf_18 PF12847.2 AJA92385.1 - 0.0023 18.4 0.0 0.0048 17.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 AJA92385.1 - 0.012 14.6 0.0 0.02 13.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 AJA92385.1 - 0.017 14.1 0.0 0.028 13.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_23 PF13489.1 AJA92385.1 - 0.019 14.7 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.1 AJA92385.1 - 0.035 13.7 0.0 0.052 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.1 AJA92385.1 - 0.078 12.5 0.2 0.2 11.2 0.1 1.7 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_26 PF13659.1 AJA92385.1 - 0.13 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain TauE PF01925.14 AJA92386.1 - 2.2e-46 158.2 37.9 2.7e-46 157.9 26.3 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Glycos_transf_2 PF00535.21 AJA92387.1 - 1.4e-28 99.6 0.5 2.8e-28 98.6 0.3 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 AJA92387.1 - 8e-18 65.0 0.0 1e-17 64.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 AJA92387.1 - 2.6e-07 30.1 3.2 0.0009 18.5 0.1 3.0 1 1 1 2 2 2 2 Glycosyltransferase like family Glyco_trans_2_3 PF13632.1 AJA92387.1 - 5.7e-06 26.1 0.0 8.9e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 AJA92387.1 - 4.3e-05 22.7 3.2 9.5e-05 21.6 2.2 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 AJA92387.1 - 0.14 11.4 0.0 0.31 10.2 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 21 HTH_24 PF13412.1 AJA92388.1 - 8.4e-12 44.2 3.2 1.7e-11 43.3 1.6 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 AJA92388.1 - 9.8e-12 44.4 0.1 1.7e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 AsnC family HTH_AsnC-type PF13404.1 AJA92388.1 - 5e-10 38.7 0.0 9e-10 37.9 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.17 AJA92388.1 - 3.8e-06 26.5 0.3 5.5e-06 25.9 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 AJA92388.1 - 0.00016 21.2 0.4 0.00034 20.2 0.3 1.6 1 0 0 1 1 1 1 HTH domain Sulfolobus_pRN PF05584.6 AJA92388.1 - 0.0034 17.3 0.2 0.0061 16.5 0.1 1.4 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein B-block_TFIIIC PF04182.7 AJA92388.1 - 0.0042 16.8 0.9 0.0071 16.1 0.3 1.7 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC TrmB PF01978.14 AJA92388.1 - 0.0063 16.1 1.7 0.0095 15.6 0.3 1.9 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Ribosomal_S25 PF03297.10 AJA92388.1 - 0.0093 15.9 1.1 0.017 15.1 0.3 1.7 2 0 0 2 2 2 1 S25 ribosomal protein HTH_20 PF12840.2 AJA92388.1 - 0.013 15.2 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.1 AJA92388.1 - 0.018 15.0 0.2 0.034 14.1 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MotA_activ PF09114.5 AJA92388.1 - 0.022 14.4 0.8 0.038 13.7 0.1 1.6 2 0 0 2 2 2 0 Transcription factor MotA, activation domain MarR_2 PF12802.2 AJA92388.1 - 0.034 13.8 0.0 0.054 13.1 0.0 1.3 1 0 0 1 1 1 0 MarR family Mga PF05043.8 AJA92388.1 - 0.037 14.2 0.4 0.073 13.3 0.3 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain Rrf2 PF02082.15 AJA92388.1 - 0.084 12.9 0.3 0.26 11.4 0.1 1.8 2 0 0 2 2 2 0 Transcriptional regulator HTH_28 PF13518.1 AJA92388.1 - 0.09 12.8 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain BPD_transp_1 PF00528.17 AJA92389.1 - 3e-27 95.3 9.5 3e-27 95.3 6.6 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 AJA92389.1 - 0.033 13.5 0.1 0.033 13.5 0.0 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C XPG_N PF00752.12 AJA92390.1 - 1.8e-21 76.3 0.0 4.3e-21 75.0 0.0 1.6 2 0 0 2 2 2 1 XPG N-terminal domain XPG_I PF00867.13 AJA92390.1 - 2.6e-21 75.4 0.0 6.1e-21 74.2 0.0 1.7 1 0 0 1 1 1 1 XPG I-region 5_3_exonuc PF01367.15 AJA92390.1 - 0.00031 20.9 0.0 0.0013 18.9 0.0 2.0 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold Lumazine_bd PF12870.2 AJA92390.1 - 0.033 14.2 2.1 0.64 10.0 0.1 2.6 2 0 0 2 2 2 0 Lumazine-binding domain Ribosomal_L9_C PF03948.9 AJA92391.1 - 0.013 15.5 0.1 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain tRNA-synt_1g PF09334.6 AJA92392.1 - 4.4e-134 447.0 0.5 5.5e-134 446.6 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 AJA92392.1 - 2e-22 78.9 0.5 3.7e-07 28.5 0.0 4.1 2 2 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 AJA92392.1 - 1.8e-12 47.0 0.3 4.2e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.8 AJA92392.1 - 4.5e-08 32.9 0.3 1.5e-07 31.2 0.0 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.13 AJA92392.1 - 4.6e-06 25.5 0.1 0.0078 14.9 0.0 3.2 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 AJA92392.1 - 0.0027 16.5 0.0 0.016 14.0 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (R) Endotoxin_N PF03945.9 AJA92392.1 - 0.04 13.3 0.0 0.075 12.4 0.0 1.4 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain FhuF PF06276.7 AJA92392.1 - 0.062 13.2 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter PolC_DP2 PF03833.8 AJA92392.1 - 0.071 10.7 0.8 0.1 10.2 0.5 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Gene66 PF02053.10 AJA92392.1 - 0.11 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Gene 66 (IR5) protein Ribosomal_L37e PF01907.14 AJA92392.1 - 0.13 12.0 0.4 0.27 11.0 0.3 1.5 1 0 0 1 1 1 0 Ribosomal protein L37e zf-C3HC4_3 PF13920.1 AJA92392.1 - 1.1 8.9 8.3 0.58 9.8 0.4 2.3 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.7 AJA92392.1 - 2.4 8.3 6.8 2 8.6 3.6 1.7 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding DUF424 PF04242.8 AJA92394.1 - 2.7e-20 72.2 0.1 2.9e-20 72.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) FB_lectin PF07367.6 AJA92394.1 - 0.045 13.3 0.0 0.055 13.0 0.0 1.1 1 0 0 1 1 1 0 Fungal fruit body lectin MethyltransfD12 PF02086.10 AJA92395.1 - 5.8e-65 219.3 2.6 6.6e-65 219.1 1.8 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase DUF2089 PF09862.4 AJA92395.1 - 0.047 13.4 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Cons_hypoth95 PF03602.10 AJA92395.1 - 0.13 11.6 0.0 0.28 10.5 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Sulfatase PF00884.18 AJA92396.1 - 1.5e-24 86.8 0.0 1e-23 83.9 0.0 2.3 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.17 AJA92396.1 - 7e-12 45.3 0.2 1.1e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.13 AJA92396.1 - 0.00048 19.5 0.0 0.0033 16.8 0.0 2.2 3 0 0 3 3 3 1 Metalloenzyme superfamily NUDIX PF00293.23 AJA92397.1 - 1.3e-11 44.3 0.0 1.5e-11 44.1 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain RNA_pol_Rpb6 PF01192.17 AJA92397.1 - 0.076 12.7 0.3 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb6 CN_hydrolase PF00795.17 AJA92398.1 - 7.3e-34 116.7 0.0 9.3e-34 116.3 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Glyoxalase_2 PF12681.2 AJA92399.1 - 2.4e-16 60.2 0.0 2.9e-16 60.0 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 AJA92399.1 - 9.9e-09 35.2 0.0 1.8e-08 34.4 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.1 AJA92399.1 - 0.016 15.2 0.0 3.3 7.7 0.0 2.1 2 0 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CppA_N PF14506.1 AJA92399.1 - 0.11 12.1 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 CppA N-terminal PNP_UDP_1 PF01048.15 AJA92400.1 - 2e-46 157.8 0.0 2.2e-46 157.7 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DUF4368 PF14287.1 AJA92400.1 - 0.018 14.8 0.1 0.037 13.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) ABC2_membrane PF01061.19 AJA92401.1 - 9.4e-33 113.1 20.9 9.4e-33 113.1 14.5 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 AJA92401.1 - 4.9e-16 58.7 34.4 6.2e-16 58.3 23.8 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 AJA92401.1 - 4e-09 35.9 25.4 5e-09 35.6 17.6 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 AJA92401.1 - 2.4e-08 33.1 27.0 1.3e-07 30.7 18.7 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein Acylphosphatase PF00708.13 AJA92403.1 - 1.2e-27 95.8 1.1 1.3e-27 95.7 0.8 1.0 1 0 0 1 1 1 1 Acylphosphatase Big_3 PF07523.7 AJA92404.1 - 0.055 13.5 0.7 0.095 12.7 0.5 1.3 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Metallophos_2 PF12850.2 AJA92405.1 - 1.2e-19 70.6 0.1 1.6e-19 70.3 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 AJA92405.1 - 2.6e-16 59.6 0.4 3.8e-16 59.0 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF2124 PF09897.4 AJA92405.1 - 0.00014 21.5 0.0 0.00029 20.5 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) Metallophos_3 PF14582.1 AJA92405.1 - 0.0003 20.0 0.1 0.00078 18.6 0.1 1.8 2 1 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily MutL PF13941.1 AJA92405.1 - 0.019 13.3 0.0 0.033 12.5 0.0 1.3 1 0 0 1 1 1 0 MutL protein DUF3877 PF12993.2 AJA92406.1 - 0.15 11.5 3.2 10 5.6 0.1 2.9 2 1 1 3 3 3 0 Domain of unknown function, E. rectale Gene description (DUF3877) PBS_linker_poly PF00427.16 AJA92407.1 - 0.07 12.7 0.2 0.088 12.4 0.1 1.1 1 0 0 1 1 1 0 Phycobilisome Linker polypeptide Alba PF01918.16 AJA92408.1 - 4.7e-05 22.8 0.1 6.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Alba YycI PF09648.5 AJA92408.1 - 0.017 14.6 0.2 0.018 14.5 0.1 1.3 1 1 0 1 1 1 0 YycH protein MTS PF05175.9 AJA92408.1 - 0.05 12.9 0.1 0.067 12.5 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Band_7 PF01145.20 AJA92409.1 - 3.7e-25 88.8 6.9 6e-25 88.1 4.8 1.4 1 1 0 1 1 1 1 SPFH domain / Band 7 family GFO_IDH_MocA PF01408.17 AJA92410.1 - 3.6e-22 79.1 0.0 6e-22 78.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 AJA92410.1 - 1.3e-05 24.9 0.0 3.6e-05 23.5 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain Rotamase PF00639.16 AJA92411.1 - 8.9e-27 93.6 0.1 1e-26 93.4 0.1 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.1 AJA92411.1 - 4.9e-25 88.0 0.1 5.8e-25 87.8 0.1 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.1 AJA92411.1 - 1.9e-08 34.9 0.0 2.1e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Trm56 PF01994.11 AJA92413.1 - 3.3e-48 162.4 0.6 4.7e-48 161.9 0.4 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.14 AJA92413.1 - 3.2e-06 27.0 0.1 4.5e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family SPOUT_MTase_2 PF14419.1 AJA92413.1 - 0.019 14.1 0.1 0.034 13.3 0.0 1.4 1 1 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Trp_syntA PF00290.15 AJA92414.1 - 6.2e-84 280.5 1.9 6.8e-84 280.4 1.3 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 AJA92414.1 - 1.2e-07 31.2 0.8 1.4e-06 27.7 0.2 2.3 1 1 0 2 2 2 1 Histidine biosynthesis protein FMN_dh PF01070.13 AJA92414.1 - 5e-07 28.8 0.1 1.1e-05 24.5 0.0 2.2 2 0 0 2 2 2 1 FMN-dependent dehydrogenase DHO_dh PF01180.16 AJA92414.1 - 2.5e-05 23.3 3.7 4e-05 22.7 2.5 1.4 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase Ribul_P_3_epim PF00834.14 AJA92414.1 - 2.7e-05 23.3 0.3 3.9e-05 22.8 0.2 1.2 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family IGPS PF00218.16 AJA92414.1 - 0.00035 19.7 0.1 0.004 16.2 0.1 2.1 1 1 0 1 1 1 1 Indole-3-glycerol phosphate synthase PcrB PF01884.12 AJA92414.1 - 0.0012 18.1 3.4 0.038 13.2 0.4 2.8 2 1 1 3 3 3 1 PcrB family TMP-TENI PF02581.12 AJA92414.1 - 0.0056 15.8 0.6 0.013 14.5 0.4 1.6 2 1 0 2 2 2 1 Thiamine monophosphate synthase/TENI PEP_mutase PF13714.1 AJA92414.1 - 0.0068 15.6 0.0 0.4 9.8 0.0 2.9 2 1 0 2 2 2 1 Phosphoenolpyruvate phosphomutase DHDPS PF00701.17 AJA92414.1 - 0.0082 14.7 0.5 0.34 9.4 0.2 2.4 1 1 1 2 2 2 1 Dihydrodipicolinate synthetase family IMPDH PF00478.20 AJA92414.1 - 0.012 14.5 0.8 0.1 11.4 0.8 2.3 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NeuB PF03102.9 AJA92415.1 - 1.4e-71 240.4 0.3 1.6e-71 240.2 0.2 1.0 1 0 0 1 1 1 1 NeuB family Ribonuc_red_lgC PF02867.10 AJA92416.1 - 2.9e-152 507.9 0.0 7.1e-152 506.7 0.0 1.6 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.16 AJA92416.1 - 1.9e-27 94.8 0.0 5e-27 93.5 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.11 AJA92416.1 - 7.2e-24 84.0 0.0 2.2e-23 82.4 0.0 1.9 1 0 0 1 1 1 1 ATP cone domain UBA_2 PF08587.6 AJA92416.1 - 0.046 13.9 0.0 16 5.7 0.0 3.2 2 1 0 2 2 2 0 Ubiquitin associated domain (UBA) GPS PF01825.16 AJA92417.1 - 0.0064 16.5 3.6 0.018 15.1 2.5 1.8 1 1 0 1 1 1 1 Latrophilin/CL-1-like GPS domain YABBY PF04690.8 AJA92417.1 - 0.016 15.4 0.4 0.018 15.3 0.3 1.1 1 0 0 1 1 1 0 YABBY protein zf-BED PF02892.10 AJA92417.1 - 0.18 11.5 1.1 0.28 10.9 0.8 1.5 1 1 0 1 1 1 0 BED zinc finger Sgf11 PF08209.6 AJA92417.1 - 0.3 10.4 0.2 0.3 10.4 0.1 2.0 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) RNA_pol_A_bac PF01000.21 AJA92418.1 - 1.7e-22 79.6 0.0 3.8e-22 78.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 AJA92418.1 - 2.4e-11 42.5 0.0 3e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Zip PF02535.17 AJA92419.1 - 1.2e-06 27.7 17.0 1.2e-06 27.7 11.7 2.3 1 1 1 2 2 2 1 ZIP Zinc transporter YrhC PF14143.1 AJA92419.1 - 9.6 6.2 9.8 8.1 6.4 0.7 4.1 3 1 1 4 4 4 0 YrhC-like protein Saccharop_dh_N PF04455.7 AJA92420.1 - 2.2e-34 117.6 0.2 6.7e-34 116.1 0.2 1.8 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region Gar1 PF04410.9 AJA92422.1 - 3.1e-07 29.9 0.0 3.3e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region DUF1668 PF07893.8 AJA92422.1 - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1668) ThiC PF01964.13 AJA92423.1 - 2.9e-173 576.2 0.6 3.4e-173 576.0 0.4 1.0 1 0 0 1 1 1 1 ThiC family TP_methylase PF00590.15 AJA92424.1 - 2.4e-35 122.1 0.0 2.9e-35 121.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF4127 PF13552.1 AJA92424.1 - 0.0074 14.7 0.0 0.013 13.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4127) DUF457 PF04307.9 AJA92425.1 - 3.4e-08 32.9 7.1 3.4e-08 32.9 4.9 1.5 2 0 0 2 2 2 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) FAM165 PF14981.1 AJA92426.1 - 0.014 14.8 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 FAM165 family TMEM154 PF15102.1 AJA92426.1 - 0.098 12.3 0.1 0.1 12.2 0.1 1.0 1 0 0 1 1 1 0 TMEM154 protein family TIM21 PF08294.6 AJA92426.1 - 0.11 12.1 0.1 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 TIM21 CDP-OH_P_transf PF01066.16 AJA92427.1 - 4.2e-15 55.8 6.9 1.3e-14 54.2 4.8 1.8 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase Gln-synt_C PF00120.19 AJA92428.1 - 3.9e-87 291.6 0.0 5e-87 291.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 AJA92428.1 - 5.5e-26 89.9 0.1 1.2e-25 88.8 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain DUF2527 PF10736.4 AJA92428.1 - 0.24 11.0 2.9 2.5 7.7 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2627) Ribosomal_S27e PF01667.12 AJA92429.1 - 6.9e-17 60.7 0.9 7.6e-17 60.6 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.7 AJA92429.1 - 2.7e-06 26.6 0.7 4.1e-06 26.0 0.5 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Zn_Tnp_IS91 PF14319.1 AJA92429.1 - 0.00029 20.3 0.8 0.00033 20.1 0.6 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain zf-CHY PF05495.7 AJA92429.1 - 0.0042 17.2 1.1 0.0049 17.0 0.8 1.2 1 0 0 1 1 1 1 CHY zinc finger DUF2318 PF10080.4 AJA92429.1 - 0.011 15.5 0.4 0.012 15.4 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF4206 PF13901.1 AJA92429.1 - 0.017 14.6 0.8 0.017 14.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4206) ZZ PF00569.12 AJA92429.1 - 0.017 14.6 3.5 1.8 8.1 0.4 2.2 2 0 0 2 2 2 0 Zinc finger, ZZ type OrfB_Zn_ribbon PF07282.6 AJA92429.1 - 0.046 13.3 1.1 0.049 13.3 0.7 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2H2_7 PF15269.1 AJA92429.1 - 0.05 13.4 0.6 0.06 13.2 0.4 1.1 1 0 0 1 1 1 0 Zinc-finger zf-BED PF02892.10 AJA92429.1 - 0.056 13.2 4.2 0.18 11.6 0.1 2.1 1 1 1 2 2 2 0 BED zinc finger zf-C4_Topoisom PF01396.14 AJA92429.1 - 0.066 12.7 0.8 5.3 6.6 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger RNA_POL_M_15KD PF02150.11 AJA92429.1 - 0.066 12.9 0.4 6.4 6.5 0.0 2.1 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Lar_restr_allev PF14354.1 AJA92429.1 - 0.072 13.4 2.3 4 7.7 0.2 2.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar DZR PF12773.2 AJA92429.1 - 0.085 12.6 1.7 0.13 12.0 1.2 1.4 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_6 PF14599.1 AJA92429.1 - 0.13 12.0 4.2 0.45 10.3 2.9 1.7 1 1 0 1 1 1 0 Zinc-ribbon GCC2_GCC3 PF07699.8 AJA92429.1 - 0.16 11.5 3.6 0.28 10.7 2.5 1.5 1 1 0 1 1 1 0 GCC2 and GCC3 zf-ribbon_3 PF13248.1 AJA92429.1 - 0.16 11.1 3.2 1.6 7.9 2.3 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-RING_3 PF14369.1 AJA92429.1 - 0.18 11.8 4.3 0.29 11.1 3.0 1.3 1 0 0 1 1 1 0 zinc-finger PhnA_Zn_Ribbon PF08274.7 AJA92429.1 - 0.23 11.2 2.5 0.37 10.5 1.8 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon A2L_zn_ribbon PF08792.5 AJA92429.1 - 0.25 10.8 5.3 0.53 9.8 3.7 1.5 1 1 0 1 1 1 0 A2L zinc ribbon domain Rpr2 PF04032.11 AJA92429.1 - 0.31 10.9 3.1 0.96 9.3 0.4 2.0 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Zn_Tnp_IS1595 PF12760.2 AJA92429.1 - 0.34 10.7 3.2 0.68 9.7 2.3 1.4 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 AJA92429.1 - 0.38 10.7 2.6 0.71 9.8 1.7 1.6 1 1 0 1 1 1 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.8 AJA92429.1 - 0.43 10.0 5.2 5.1 6.6 3.7 2.1 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit PADR1 PF08063.7 AJA92429.1 - 0.47 9.8 2.6 2 7.8 0.6 2.0 1 1 1 2 2 2 0 PADR1 (NUC008) domain TFIIS_C PF01096.13 AJA92429.1 - 0.89 9.2 4.2 6.8 6.4 0.3 2.2 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) zf-C2H2_3 PF13878.1 AJA92429.1 - 0.93 9.1 5.9 1.3 8.6 0.6 2.2 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Zn_Tnp_IS1 PF03811.8 AJA92429.1 - 3.8 7.0 5.7 14 5.2 3.9 1.9 1 1 0 1 1 1 0 InsA N-terminal domain Amidohydro_1 PF01979.15 AJA92430.1 - 7.1e-29 101.5 0.1 1.5e-28 100.4 0.0 1.5 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 AJA92430.1 - 4.3e-10 39.2 0.0 1.2e-09 37.8 0.0 1.8 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 AJA92430.1 - 1.9e-08 34.7 0.0 0.0018 18.4 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 AJA92430.1 - 0.00029 20.1 0.0 0.55 9.3 0.0 2.5 1 1 0 2 2 2 2 Amidohydrolase family RIO1 PF01163.17 AJA92431.1 - 1.6e-47 161.3 0.0 2.3e-47 160.7 0.0 1.2 1 0 0 1 1 1 1 RIO1 family DUF1811 PF08838.5 AJA92431.1 - 0.63 10.0 2.8 2.7 8.0 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1811) MerT PF02411.10 AJA92432.1 - 0.017 14.9 0.6 0.02 14.6 0.4 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein Hydrolase_like PF13242.1 AJA92433.1 - 5.8e-12 45.1 0.0 9.4e-12 44.4 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.1 AJA92433.1 - 1e-11 45.3 0.0 4e-11 43.4 0.0 1.7 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PNK3P PF08645.6 AJA92433.1 - 1.8e-10 40.4 0.1 2.1e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase Hydrolase PF00702.21 AJA92433.1 - 0.0012 19.3 0.0 0.0015 18.9 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 AJA92433.1 - 0.0019 18.0 0.1 0.0033 17.2 0.1 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF2608 PF11019.3 AJA92433.1 - 0.0077 15.2 1.2 0.0077 15.2 0.2 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2608) Hydrolase_3 PF08282.7 AJA92433.1 - 0.028 13.9 3.6 0.15 11.5 0.1 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase 5TM-5TMR_LYT PF07694.7 AJA92434.1 - 0.038 13.3 0.1 0.041 13.2 0.1 1.0 1 0 0 1 1 1 0 5TMR of 5TMR-LYT DUF4064 PF13273.1 AJA92434.1 - 0.054 13.5 0.1 0.11 12.5 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4190 PF13828.1 AJA92434.1 - 0.077 12.5 0.3 0.092 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4190) DUF805 PF05656.9 AJA92434.1 - 0.1 12.4 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) ATPase_gene1 PF09527.5 AJA92434.1 - 0.82 9.5 6.6 0.32 10.8 0.8 2.0 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit (ATPase_gene1) CobA_CobO_BtuR PF02572.10 AJA92435.1 - 1.5e-64 216.7 0.1 1.7e-64 216.5 0.1 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_14 PF13173.1 AJA92435.1 - 0.0033 17.3 0.5 0.0045 16.8 0.4 1.5 1 1 0 1 1 1 1 AAA domain Response_reg PF00072.19 AJA92435.1 - 0.021 14.7 0.2 0.038 13.9 0.1 1.5 2 0 0 2 2 2 0 Response regulator receiver domain AAA_22 PF13401.1 AJA92435.1 - 0.048 13.8 1.2 0.18 11.9 0.8 1.8 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 AJA92435.1 - 0.067 12.6 0.8 2.3 7.6 0.1 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein CbiA PF01656.18 AJA92435.1 - 0.098 12.0 0.5 0.22 10.9 0.3 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain FeoB_C PF07664.7 AJA92436.1 - 0.042 13.2 5.2 2 7.9 0.4 2.2 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus Peptidase_M56 PF05569.6 AJA92436.1 - 0.11 11.4 1.5 0.13 11.1 1.0 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 HTH_24 PF13412.1 AJA92437.1 - 3.2e-10 39.2 7.2 8.9e-05 21.7 1.9 2.8 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 AJA92437.1 - 8.8e-08 31.5 1.4 5.7e-05 22.5 0.4 2.7 3 0 0 3 3 3 2 AsnC-type helix-turn-helix domain HTH_5 PF01022.15 AJA92437.1 - 3.7e-05 23.2 0.7 0.0059 16.2 0.0 2.6 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 AJA92437.1 - 4.7e-05 22.9 0.0 0.24 11.1 0.0 2.3 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 AJA92437.1 - 0.0012 18.4 0.1 0.008 15.8 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 AJA92437.1 - 0.005 17.1 0.1 0.21 11.9 0.1 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR PF01047.17 AJA92437.1 - 0.0064 16.1 0.9 1.6 8.4 0.3 2.5 2 0 0 2 2 2 1 MarR family HTH_41 PF14502.1 AJA92437.1 - 0.0074 15.8 0.1 0.1 12.2 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain Mga PF05043.8 AJA92437.1 - 0.01 16.1 0.3 0.027 14.7 0.2 1.8 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_11 PF08279.7 AJA92437.1 - 0.012 15.2 0.8 0.36 10.5 0.2 2.7 3 0 0 3 3 3 0 HTH domain HTH_34 PF13601.1 AJA92437.1 - 0.018 15.0 0.1 0.86 9.6 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_36 PF13730.1 AJA92437.1 - 0.08 13.0 0.4 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain GvpK PF05121.7 AJA92437.1 - 0.2 11.5 2.9 0.69 9.7 2.0 1.9 1 1 0 1 1 1 0 Gas vesicle protein K HTH_DeoR PF08220.7 AJA92437.1 - 1.9 8.0 4.8 0.43 10.1 0.2 2.3 3 0 0 3 3 3 0 DeoR-like helix-turn-helix domain DUF948 PF06103.6 AJA92437.1 - 3 7.7 5.7 14 5.6 0.1 2.8 2 1 1 3 3 2 0 Bacterial protein of unknown function (DUF948) HSBP1 PF06825.7 AJA92437.1 - 8.9 5.9 8.3 1.7 8.3 0.0 3.4 5 0 0 5 5 5 0 Heat shock factor binding protein 1 vATP-synt_AC39 PF01992.11 AJA92438.1 - 6.4e-34 117.5 9.1 8.1e-34 117.2 6.3 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit DUF4454 PF14628.1 AJA92438.1 - 0.0043 16.7 0.4 0.011 15.3 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4454) TraO PF10626.4 AJA92438.1 - 0.017 14.4 0.3 0.044 13.1 0.0 1.8 2 0 0 2 2 2 0 Conjugative transposon protein TraO Rieske PF00355.21 AJA92439.1 - 3.3e-17 61.8 0.1 4e-17 61.5 0.1 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 AJA92439.1 - 2e-08 33.8 0.0 2.4e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain TFIIB PF00382.14 AJA92440.1 - 5e-39 131.9 2.9 2.9e-19 68.6 0.2 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 AJA92440.1 - 2.3e-12 46.0 0.3 3.8e-12 45.3 0.2 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.18 AJA92440.1 - 2.9e-05 23.6 0.2 0.0017 17.8 0.1 2.3 3 0 0 3 3 3 1 Cyclin, N-terminal domain Ribosomal_S27e PF01667.12 AJA92440.1 - 0.0022 17.4 0.5 0.0047 16.4 0.4 1.5 1 0 0 1 1 1 1 Ribosomal protein S27 HTH_Mga PF08280.6 AJA92440.1 - 0.0068 16.1 0.9 0.078 12.7 0.0 2.4 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain zf-ribbon_3 PF13248.1 AJA92440.1 - 0.011 14.9 0.4 0.02 14.0 0.3 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Sigma70_r4 PF04545.11 AJA92440.1 - 0.022 14.0 0.0 0.17 11.2 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_11 PF08279.7 AJA92440.1 - 0.023 14.3 0.2 0.11 12.1 0.0 2.1 3 0 0 3 3 3 0 HTH domain Cyclin_C PF02984.14 AJA92440.1 - 0.045 13.6 0.0 1.4 8.8 0.0 2.5 3 0 0 3 3 3 0 Cyclin, C-terminal domain RPA_interact_C PF14768.1 AJA92440.1 - 0.054 13.8 0.1 0.13 12.6 0.1 1.6 1 0 0 1 1 1 0 Replication protein A interacting C-terminal HMG_CoA_synt_C PF08540.5 AJA92440.1 - 0.06 12.8 0.1 0.087 12.2 0.0 1.2 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal Sigma70_r4_2 PF08281.7 AJA92440.1 - 0.12 11.8 0.5 0.64 9.5 0.0 2.3 3 0 0 3 3 3 0 Sigma-70, region 4 RNA_POL_M_15KD PF02150.11 AJA92440.1 - 0.26 11.0 1.4 0.57 9.9 0.9 1.5 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Pyridox_ox_2 PF12900.2 AJA92441.1 - 7.9e-22 77.6 0.0 1e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 AJA92441.1 - 1.6e-11 44.0 0.0 3.2e-11 43.0 0.0 1.5 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TPR_11 PF13414.1 AJA92442.1 - 2e-13 49.7 2.7 3.3e-07 29.8 0.0 2.3 2 0 0 2 2 2 2 TPR repeat TPR_1 PF00515.23 AJA92442.1 - 1.1e-12 46.9 2.6 1e-05 24.8 0.1 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92442.1 - 1.9e-11 42.9 0.4 0.0002 21.0 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat Peptidase_M10 PF00413.19 AJA92442.1 - 2e-10 40.5 0.1 7.4e-10 38.7 0.1 1.9 1 1 0 1 1 1 1 Matrixin TPR_12 PF13424.1 AJA92442.1 - 1.1e-07 31.7 0.4 0.013 15.4 0.0 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat Reprolysin_5 PF13688.1 AJA92442.1 - 4.6e-07 29.9 0.1 8.7e-07 29.0 0.0 1.5 1 1 0 1 1 1 1 Metallo-peptidase family M12 TPR_8 PF13181.1 AJA92442.1 - 4.3e-06 26.1 4.5 0.027 14.2 0.1 3.5 2 1 1 3 3 3 2 Tetratricopeptide repeat Apc3 PF12895.2 AJA92442.1 - 4.8e-06 26.6 1.3 0.0068 16.5 0.0 2.5 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.1 AJA92442.1 - 7.2e-06 26.5 0.0 0.01 16.5 0.0 2.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92442.1 - 2.2e-05 24.6 0.0 1.3 9.8 0.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92442.1 - 4.2e-05 23.3 0.4 0.25 11.2 0.0 2.8 3 0 0 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.1 AJA92442.1 - 4.3e-05 23.3 1.1 0.24 11.6 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92442.1 - 4.5e-05 23.6 0.4 0.45 10.8 0.1 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 AJA92442.1 - 5.4e-05 22.6 0.1 0.53 10.2 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat Reprolysin_2 PF13574.1 AJA92442.1 - 0.00045 20.3 0.1 0.00074 19.6 0.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.3 AJA92442.1 - 0.0008 18.7 0.1 0.0015 17.8 0.0 1.5 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Peptidase_M54 PF07998.6 AJA92442.1 - 0.0053 16.5 0.1 0.012 15.3 0.1 1.6 1 0 0 1 1 1 1 Peptidase family M54 Reprolysin_3 PF13582.1 AJA92442.1 - 0.02 15.4 0.2 0.043 14.3 0.1 1.6 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.1 AJA92442.1 - 0.022 14.2 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.4 AJA92442.1 - 0.025 13.4 2.3 0.044 12.6 1.6 1.3 1 0 0 1 1 1 0 Peptidase M66 TPR_6 PF13174.1 AJA92442.1 - 0.04 14.3 0.0 13 6.4 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 AJA92442.1 - 0.05 13.8 0.0 0.22 11.7 0.0 2.1 2 0 0 2 2 2 0 Alkyl sulfatase dimerisation Reprolysin PF01421.14 AJA92442.1 - 0.098 12.2 0.1 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease TPR_3 PF07720.7 AJA92442.1 - 0.3 10.9 6.6 0.55 10.0 0.1 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat DNA_primase_lrg PF04104.9 AJA92443.1 - 9.1e-24 84.1 0.4 2.1e-23 82.9 0.2 1.6 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit GrpE PF01025.14 AJA92443.1 - 0.037 13.5 0.0 0.081 12.4 0.0 1.5 1 0 0 1 1 1 0 GrpE adh_short PF00106.20 AJA92444.1 - 2.3e-40 138.2 0.2 3.2e-40 137.7 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 AJA92444.1 - 3.6e-18 66.2 0.3 4.7e-18 65.8 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 AJA92444.1 - 2.1e-17 63.3 0.1 2.9e-17 62.9 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 AJA92444.1 - 1.8e-05 24.2 0.1 8.3e-05 22.1 0.0 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 AJA92444.1 - 6.7e-05 22.9 2.0 0.00018 21.5 1.4 1.8 1 1 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 AJA92444.1 - 0.018 14.3 2.0 0.096 11.9 0.2 2.2 2 1 0 2 2 2 0 NmrA-like family Eno-Rase_NADH_b PF12242.3 AJA92444.1 - 0.034 13.9 2.5 0.11 12.2 0.8 2.3 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ClpB_D2-small PF10431.4 AJA92444.1 - 0.04 13.8 0.2 0.63 9.9 0.0 2.3 2 0 0 2 2 2 0 C-terminal, D2-small domain, of ClpB protein POR_N PF01855.14 AJA92445.1 - 7.9e-54 182.5 0.0 1.2e-53 182.0 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 AJA92445.1 - 6.1e-32 110.8 0.2 1.1e-31 110.0 0.1 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Transketolase_C PF02780.15 AJA92445.1 - 3.7e-07 30.1 0.0 8.9e-07 28.8 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 AJA92445.1 - 0.0015 18.0 0.0 0.0029 17.1 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FAD_binding_2 PF00890.19 AJA92447.1 - 4.9e-99 332.0 0.2 6e-99 331.7 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 AJA92447.1 - 2e-36 124.6 0.3 3.3e-36 123.9 0.2 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.9 AJA92447.1 - 6.7e-05 22.8 11.5 0.00062 19.7 5.6 3.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 AJA92447.1 - 0.00091 18.1 0.1 0.084 11.7 0.2 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.9 AJA92447.1 - 0.0016 17.0 1.3 0.67 8.3 0.4 2.6 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.2 AJA92447.1 - 0.0034 16.5 0.4 0.056 12.5 0.3 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.19 AJA92447.1 - 0.0039 16.1 0.0 0.56 9.0 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.12 AJA92447.1 - 0.0091 15.1 1.9 0.021 13.9 0.1 2.2 2 0 0 2 2 2 1 Thi4 family Lycopene_cycl PF05834.7 AJA92447.1 - 0.011 14.6 0.2 0.017 14.0 0.1 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Vps51 PF08700.6 AJA92447.1 - 0.15 11.8 0.2 0.3 10.9 0.1 1.5 1 0 0 1 1 1 0 Vps51/Vps67 DsbD PF02683.10 AJA92449.1 - 9.1e-45 152.8 20.1 1.1e-44 152.6 13.9 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region NadA PF02445.11 AJA92450.1 - 8.6e-115 382.6 5.5 9.7e-115 382.4 3.8 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Toxin_59 PF15537.1 AJA92450.1 - 0.052 13.6 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative toxin 59 DegT_DnrJ_EryC1 PF01041.12 AJA92451.1 - 9.8e-103 343.9 0.0 1.1e-102 343.7 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 AJA92451.1 - 0.00034 19.8 0.4 0.0015 17.7 0.3 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 AJA92451.1 - 0.062 11.5 0.0 0.11 10.7 0.0 1.4 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Pterin_4a PF01329.14 AJA92452.1 - 6.3e-30 102.7 0.0 7.4e-30 102.5 0.0 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase IF-2 PF11987.3 AJA92452.1 - 0.034 14.0 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 Translation-initiation factor 2 ATP-synt_ab PF00006.20 AJA92453.1 - 9.1e-64 214.8 0.0 1.3e-63 214.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.18 AJA92453.1 - 1e-10 41.6 3.9 2.4e-10 40.4 2.1 2.1 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain ATP-synt_ab_C PF00306.22 AJA92453.1 - 7.8e-09 36.0 0.1 1.4e-08 35.1 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain HAS-barrel PF09378.5 AJA92453.1 - 7.4e-05 22.5 1.2 0.0002 21.1 0.8 1.7 1 0 0 1 1 1 1 HAS barrel domain tRNA-synt_1f PF01921.13 AJA92454.1 - 4.7e-106 354.5 0.0 6.3e-106 354.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 AJA92454.1 - 0.0065 15.1 0.2 0.027 13.1 0.0 2.1 1 1 1 2 2 2 1 tRNA synthetases class I (M) THUMP PF02926.12 AJA92454.1 - 0.037 13.9 0.8 5.2 6.9 0.1 2.8 2 1 0 2 2 2 0 THUMP domain tRNA-synt_1 PF00133.17 AJA92454.1 - 0.053 11.5 0.0 0.1 10.5 0.0 1.4 2 0 0 2 2 2 0 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 AJA92454.1 - 0.082 12.0 0.0 0.14 11.2 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain PolyA_pol_RNAbd PF12627.2 AJA92454.1 - 0.11 12.0 0.4 0.4 10.2 0.0 2.0 2 0 0 2 2 2 0 Probable RNA and SrmB- binding site of polymerase A UPF0047 PF01894.12 AJA92455.1 - 4.7e-38 129.6 0.1 5.3e-38 129.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 RimK PF08443.6 AJA92456.1 - 9.4e-47 158.9 0.0 1.4e-46 158.4 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 AJA92456.1 - 2.3e-10 40.5 0.0 3.1e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 AJA92456.1 - 3.5e-07 29.5 0.0 4.7e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.9 AJA92456.1 - 2e-06 27.7 0.0 3e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 AJA92456.1 - 6.9e-05 22.2 0.0 0.00015 21.1 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.1 AJA92456.1 - 0.00021 20.1 0.0 0.0011 17.8 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Synapsin_C PF02750.9 AJA92456.1 - 0.0059 15.7 0.0 0.0092 15.1 0.0 1.3 1 0 0 1 1 1 1 Synapsin, ATP binding domain ATP-grasp PF02222.17 AJA92456.1 - 0.012 14.9 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_5 PF13549.1 AJA92456.1 - 0.047 12.9 0.0 0.09 11.9 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain Methyltransf_31 PF13847.1 AJA92457.1 - 1.3e-17 63.7 0.0 1.6e-17 63.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92457.1 - 2.3e-17 63.1 0.0 2.9e-17 62.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 AJA92457.1 - 6.2e-15 55.4 0.0 1e-14 54.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92457.1 - 9.4e-14 51.9 0.0 1.4e-13 51.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92457.1 - 8.1e-12 45.4 0.0 1.2e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92457.1 - 1.5e-10 41.2 0.0 3.8e-10 40.0 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_9 PF08003.6 AJA92457.1 - 1e-08 34.2 0.1 2.3e-08 33.1 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1698) NodS PF05401.6 AJA92457.1 - 1.1e-08 34.7 0.0 1.4e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.12 AJA92457.1 - 5.4e-08 32.1 0.0 6.5e-06 25.3 0.0 2.2 2 0 0 2 2 2 1 Putative methyltransferase CMAS PF02353.15 AJA92457.1 - 6.3e-08 32.0 0.0 7.6e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 AJA92457.1 - 1.3e-06 27.8 0.0 1.9e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DOT1 PF08123.8 AJA92457.1 - 3.6e-06 26.4 0.1 4.3e-05 22.9 0.0 2.0 1 1 1 2 2 2 1 Histone methylation protein DOT1 Ubie_methyltran PF01209.13 AJA92457.1 - 4.2e-05 22.7 0.2 0.0002 20.5 0.0 1.9 1 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family PCMT PF01135.14 AJA92457.1 - 5.1e-05 22.8 0.0 6.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.7 AJA92457.1 - 8.4e-05 22.0 0.0 0.00016 21.1 0.0 1.4 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW DREV PF05219.7 AJA92457.1 - 0.0033 16.3 0.0 0.0046 15.8 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.1 AJA92457.1 - 0.0037 16.9 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 AJA92457.1 - 0.0044 16.1 0.0 0.0068 15.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 AJA92457.1 - 0.0046 16.9 0.0 0.016 15.2 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 AJA92457.1 - 0.0059 15.6 0.0 0.012 14.7 0.0 1.3 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_5 PF01795.14 AJA92457.1 - 0.0083 15.4 0.0 0.02 14.1 0.0 1.5 2 0 0 2 2 2 1 MraW methylase family Pox_MCEL PF03291.11 AJA92457.1 - 0.015 14.2 0.2 0.041 12.7 0.1 1.8 1 1 0 1 1 1 0 mRNA capping enzyme AdoMet_MTase PF07757.8 AJA92457.1 - 0.019 15.0 0.0 0.053 13.6 0.0 1.8 2 0 0 2 2 1 0 Predicted AdoMet-dependent methyltransferase TehB PF03848.9 AJA92457.1 - 0.02 14.0 0.0 0.027 13.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB CheR PF01739.13 AJA92457.1 - 0.021 14.0 0.0 1.6 7.9 0.0 2.4 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_2 PF00891.13 AJA92457.1 - 0.058 12.5 0.0 0.13 11.4 0.0 1.6 2 0 0 2 2 2 0 O-methyltransferase Formyl_trans_N PF00551.14 AJA92458.1 - 5.1e-50 169.5 0.1 6e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase SWIM PF04434.12 AJA92461.1 - 0.0058 16.0 0.6 0.0095 15.3 0.4 1.3 1 0 0 1 1 1 1 SWIM zinc finger tRNA-synt_1c_C PF03950.13 AJA92462.1 - 0.019 14.6 0.1 0.023 14.3 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain NADH_Oxid_Nqo15 PF11497.3 AJA92462.1 - 0.097 12.3 0.2 1.4 8.6 0.0 2.1 1 1 1 2 2 2 0 NADH-quinone oxidoreductase chain 15 NAD_binding_10 PF13460.1 AJA92463.1 - 2.4e-13 50.4 0.0 2.5e-12 47.1 0.0 2.0 1 1 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 AJA92463.1 - 8.3e-12 45.0 0.0 2e-09 37.2 0.0 3.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 AJA92463.1 - 2.1e-09 36.6 0.3 0.00099 18.0 0.0 2.9 1 1 2 3 3 3 2 Male sterility protein 3Beta_HSD PF01073.14 AJA92463.1 - 2.4e-09 36.3 2.0 1.7e-05 23.6 0.1 3.6 2 1 2 4 4 4 3 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA92463.1 - 2.6e-05 23.2 0.0 0.0012 17.7 0.0 2.5 1 1 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.8 AJA92463.1 - 3.5e-05 23.1 0.1 0.0011 18.2 0.1 2.1 1 1 0 1 1 1 1 NmrA-like family DDE_Tnp_1_3 PF13612.1 AJA92463.1 - 0.0041 16.8 0.1 0.013 15.2 0.0 1.9 2 0 0 2 2 2 1 Transposase DDE domain NTP_transferase PF00483.18 AJA92464.1 - 1.7e-26 93.0 0.0 2.7e-26 92.3 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 AJA92464.1 - 1.4e-05 25.2 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Ribosomal_S5 PF00333.15 AJA92465.1 - 2.4e-19 68.8 0.1 3.8e-19 68.2 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 AJA92465.1 - 4.1e-15 54.8 0.2 6.8e-15 54.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain DOMON PF03351.12 AJA92465.1 - 0.14 12.1 0.1 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 DOMON domain DUF3628 PF12300.3 AJA92465.1 - 0.28 11.2 12.2 0.49 10.4 8.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3628) NAD_Gly3P_dh_N PF01210.18 AJA92466.1 - 0.067 12.9 0.0 0.15 11.7 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF427 PF04248.7 AJA92467.1 - 3.2e-30 103.6 1.1 3.6e-30 103.4 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF427) ERCC4 PF02732.10 AJA92468.1 - 2.4e-25 88.9 0.0 3.7e-25 88.3 0.0 1.3 1 0 0 1 1 1 1 ERCC4 domain HHH_5 PF14520.1 AJA92468.1 - 4.6e-07 29.9 0.1 1.5e-06 28.2 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.2 AJA92468.1 - 0.001 18.9 0.0 0.0026 17.5 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.18 AJA92468.1 - 0.0031 17.1 1.7 2.2 8.1 0.1 3.2 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_3 PF12836.2 AJA92468.1 - 0.028 14.3 0.4 0.19 11.6 0.0 2.5 3 1 0 3 3 3 0 Helix-hairpin-helix motif HHH_8 PF14716.1 AJA92468.1 - 0.06 13.5 0.1 0.19 11.9 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix domain 5_3_exonuc PF01367.15 AJA92468.1 - 0.1 12.8 0.1 0.34 11.1 0.1 1.9 1 1 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold HpaB_N PF11794.3 AJA92469.1 - 1.2e-88 296.8 0.0 2.2e-88 296.0 0.0 1.4 2 0 0 2 2 2 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.8 AJA92469.1 - 1e-71 240.0 0.5 1.5e-71 239.5 0.3 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal DEP PF00610.16 AJA92469.1 - 0.067 12.9 0.0 1.4 8.7 0.0 2.5 2 0 0 2 2 2 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) tRNA-synt_2 PF00152.15 AJA92470.1 - 2.4e-89 299.4 0.0 3.5e-89 298.8 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 AJA92470.1 - 1.9e-12 46.8 0.2 3.6e-12 45.9 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 AJA92470.1 - 0.00032 19.9 0.7 0.068 12.3 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) DUF4163 PF13739.1 AJA92471.1 - 0.062 14.0 0.2 0.11 13.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4163) HTH_45 PF14947.1 AJA92473.1 - 3.3e-11 42.8 0.1 4e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 AJA92473.1 - 7.7e-06 25.4 0.0 9.8e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 AJA92473.1 - 0.00081 19.6 0.0 0.00097 19.4 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.1 AJA92473.1 - 0.0095 15.5 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) TrmB PF01978.14 AJA92473.1 - 0.065 12.9 0.0 0.12 12.1 0.0 1.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 AJA92473.1 - 0.074 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_20 PF12840.2 AJA92473.1 - 0.11 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain ATP-sulfurylase PF01747.12 AJA92474.1 - 1.4e-88 295.8 0.3 2.1e-88 295.2 0.2 1.3 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.1 AJA92474.1 - 4.6e-44 149.6 0.0 9.1e-44 148.6 0.0 1.5 1 0 0 1 1 1 1 PUA-like domain RNase_HII PF01351.13 AJA92476.1 - 1.4e-41 142.3 0.5 1.6e-41 142.1 0.3 1.0 1 0 0 1 1 1 1 Ribonuclease HII SLH PF00395.15 AJA92477.1 - 0.14 11.9 0.4 21 4.9 0.0 2.9 2 1 0 2 2 2 0 S-layer homology domain Lactamase_B PF00753.22 AJA92478.1 - 4.2e-25 88.5 0.6 5.5e-25 88.1 0.4 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 AJA92478.1 - 0.013 15.0 0.5 0.018 14.6 0.3 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Rhomboid PF01694.17 AJA92479.1 - 7e-30 103.9 22.9 7e-30 103.9 15.9 1.5 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.5 AJA92479.1 - 0.03 14.6 1.3 0.12 12.7 0.1 2.2 2 0 0 2 2 2 0 Eukaryotic integral membrane protein (DUF1751) Fer4 PF00037.22 AJA92480.1 - 1.4e-10 40.3 11.1 2.4e-05 23.7 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 AJA92480.1 - 1.2e-09 38.4 3.8 1.7e-09 37.8 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 AJA92480.1 - 4.9e-09 35.6 10.4 0.00012 21.7 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 AJA92480.1 - 6.7e-09 35.1 8.4 6.1e-05 22.7 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 AJA92480.1 - 8e-09 35.1 3.1 1.3e-08 34.4 2.2 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 AJA92480.1 - 6e-08 32.4 1.4 8.8e-08 31.8 1.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 AJA92480.1 - 5.3e-06 26.9 8.6 0.00076 19.9 6.0 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 AJA92480.1 - 5.9e-06 26.5 4.7 0.0065 16.8 0.8 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_9 PF13187.1 AJA92480.1 - 2.1e-05 24.6 6.2 7.5e-05 22.9 4.4 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 AJA92480.1 - 3e-05 24.0 9.1 0.053 13.8 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 AJA92480.1 - 5.3e-05 23.1 4.1 0.00012 22.0 2.9 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 AJA92480.1 - 0.00015 22.4 1.7 0.34 11.6 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 AJA92480.1 - 0.00031 21.0 11.5 0.068 13.7 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 AJA92480.1 - 0.00062 20.0 5.6 0.01 16.1 3.9 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 AJA92480.1 - 0.0046 17.3 6.4 0.27 11.6 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain CAT_RBD PF03123.10 AJA92481.1 - 0.0015 18.1 0.3 0.0041 16.7 0.2 1.7 1 0 0 1 1 1 1 CAT RNA binding domain Cas_Cmr5 PF09701.5 AJA92481.1 - 0.0097 16.0 0.1 0.026 14.6 0.0 1.7 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_Cmr5) zf-CHY PF05495.7 AJA92482.1 - 1.4 9.1 5.7 1.6 8.9 3.9 1.3 1 1 0 1 1 1 0 CHY zinc finger YhjQ PF06564.7 AJA92483.1 - 0.0042 16.4 0.0 0.006 15.9 0.0 1.2 1 0 0 1 1 1 1 YhjQ protein CarboxypepD_reg PF13620.1 AJA92483.1 - 0.0058 16.6 0.0 0.013 15.5 0.0 1.6 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Y_Y_Y PF07495.8 AJA92483.1 - 0.016 14.9 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 Y_Y_Y domain Toprim_4 PF13662.1 AJA92485.1 - 7.8e-08 32.2 0.2 1.6e-07 31.1 0.2 1.6 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 AJA92485.1 - 0.0026 17.6 0.1 0.0084 16.0 0.1 2.0 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 AJA92485.1 - 0.017 15.4 0.1 0.047 13.9 0.0 1.8 2 0 0 2 2 2 0 Toprim-like Osmo_CC PF08946.5 AJA92485.1 - 0.03 14.3 0.6 3.1 7.8 0.1 3.1 2 0 0 2 2 2 0 Osmosensory transporter coiled coil DUF2790 PF10976.3 AJA92486.1 - 0.12 12.1 0.1 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2790) MIP PF00230.15 AJA92487.1 - 2.8e-38 131.6 19.0 3.1e-38 131.5 13.2 1.0 1 0 0 1 1 1 1 Major intrinsic protein TruB_N PF01509.13 AJA92488.1 - 3.5e-25 88.9 0.3 2.2e-14 53.8 0.0 3.4 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) DKCLD PF08068.7 AJA92488.1 - 5.3e-14 51.8 0.0 1.4e-13 50.5 0.0 1.7 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.15 AJA92488.1 - 8.6e-14 51.0 0.1 1.5e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 PUA domain GTP_cyclohydroI PF01227.17 AJA92488.1 - 0.15 11.3 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 GTP cyclohydrolase I Na_H_Exchanger PF00999.16 AJA92489.1 - 1.8e-64 217.6 51.3 2.3e-64 217.3 35.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Phage_Gp23 PF10669.4 AJA92489.1 - 0.19 11.8 0.3 0.54 10.3 0.2 1.7 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) MFS_1_like PF12832.2 AJA92489.1 - 2 8.2 8.8 0.25 11.1 0.2 3.4 3 0 0 3 3 3 0 MFS_1 like family Metallothio PF00131.15 AJA92490.1 - 0.014 15.2 13.2 0.014 15.2 9.1 1.9 1 1 1 2 2 2 0 Metallothionein VESA1_N PF12785.2 AJA92490.1 - 0.95 8.3 14.5 1 8.2 10.1 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 AhpC-TSA PF00578.16 AJA92491.1 - 4.2e-37 126.5 0.2 4.8e-37 126.3 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92491.1 - 8e-25 87.0 0.1 9.1e-25 86.9 0.1 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.1 AJA92491.1 - 7.1e-07 29.1 0.0 9.5e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme SCO1-SenC PF02630.9 AJA92491.1 - 9.2e-05 22.1 0.3 0.00024 20.7 0.2 1.6 1 1 0 1 1 1 1 SCO1/SenC Thioredoxin_8 PF13905.1 AJA92491.1 - 0.00046 20.2 0.1 0.00062 19.8 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like DUF899 PF05988.7 AJA92491.1 - 0.005 16.2 0.0 0.006 16.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) zf-ribbon_3 PF13248.1 AJA92492.1 - 1.9e-07 30.0 3.6 3.5e-07 29.2 2.5 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 AJA92492.1 - 4.5e-07 29.5 0.4 5.4e-07 29.3 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 AJA92492.1 - 4.5e-07 29.1 4.8 8.8e-07 28.2 3.4 1.6 1 0 0 1 1 1 1 zinc-ribbon domain zf-DHHC PF01529.15 AJA92492.1 - 0.00044 19.6 0.1 0.00058 19.3 0.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase GFA PF04828.9 AJA92492.1 - 0.0012 18.6 1.8 0.23 11.4 0.0 2.6 2 1 1 3 3 3 2 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.1 AJA92492.1 - 0.0049 16.5 4.7 0.72 9.5 0.2 2.4 2 0 0 2 2 2 2 Nudix N-terminal UPF0547 PF10571.4 AJA92492.1 - 0.052 13.2 4.0 3.3 7.4 0.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 C1_1 PF00130.17 AJA92492.1 - 0.13 12.0 1.2 0.22 11.2 0.8 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RNA_POL_M_15KD PF02150.11 AJA92492.1 - 0.21 11.3 5.6 5 6.9 0.2 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DNA_RNApol_7kD PF03604.8 AJA92492.1 - 0.29 10.6 3.1 0.73 9.3 2.1 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-NADH-PPase PF09297.6 AJA92492.1 - 0.42 10.1 5.0 1.4 8.4 3.5 1.8 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 AJA92492.1 - 0.56 10.0 7.6 1.7 8.5 0.6 2.5 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like LSM PF01423.17 AJA92493.1 - 1e-22 79.4 0.2 1.2e-22 79.2 0.1 1.0 1 0 0 1 1 1 1 LSM domain BPL_C PF02237.12 AJA92493.1 - 0.073 12.7 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain Gemin7 PF11095.3 AJA92493.1 - 0.076 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) RTBV_P12 PF06361.6 AJA92493.1 - 0.079 13.2 0.0 0.088 13.0 0.0 1.2 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein SM-ATX PF14438.1 AJA92493.1 - 0.091 12.6 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain HTH_5 PF01022.15 AJA92494.1 - 5.8e-09 35.4 0.0 0.0034 16.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 AJA92494.1 - 6.2e-08 31.9 4.0 1.4e-05 24.3 1.0 2.9 2 1 1 3 3 3 2 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 AJA92494.1 - 7.1e-06 25.5 0.0 0.0074 15.9 0.0 2.1 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 AJA92494.1 - 2.6e-05 23.8 1.2 0.038 13.6 0.1 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB RepL PF05732.6 AJA92494.1 - 7.4e-05 22.0 6.4 9.5e-05 21.6 4.2 1.4 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_34 PF13601.1 AJA92494.1 - 0.00019 21.4 1.1 0.37 10.8 0.2 2.3 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_38 PF13936.1 AJA92494.1 - 0.00049 19.5 0.1 0.0096 15.4 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.17 AJA92494.1 - 0.0012 18.5 0.4 0.044 13.4 0.1 2.2 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.15 AJA92494.1 - 0.011 15.8 0.9 2.7 8.1 0.1 2.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_28 PF13518.1 AJA92494.1 - 0.014 15.3 0.0 0.69 9.9 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 AJA92494.1 - 0.02 14.6 0.2 0.086 12.6 0.1 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_40 PF14493.1 AJA92494.1 - 0.024 14.8 0.4 0.085 13.0 0.3 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.7 AJA92494.1 - 0.028 14.5 0.1 0.26 11.4 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein PAX PF00292.13 AJA92494.1 - 0.028 14.1 0.2 0.052 13.2 0.1 1.6 1 1 0 1 1 1 0 'Paired box' domain DUF2911 PF11138.3 AJA92494.1 - 0.036 13.6 0.3 0.051 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) FeoC PF09012.5 AJA92494.1 - 0.043 13.5 0.2 0.51 10.0 0.0 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_45 PF14947.1 AJA92494.1 - 0.059 13.2 0.3 0.059 13.2 0.2 2.4 2 1 0 2 2 2 0 Winged helix-turn-helix HTH_IclR PF09339.5 AJA92494.1 - 0.06 12.9 0.0 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain Ribosomal_S25 PF03297.10 AJA92494.1 - 0.065 13.2 1.0 0.092 12.7 0.7 1.3 1 0 0 1 1 1 0 S25 ribosomal protein LexA_DNA_bind PF01726.11 AJA92494.1 - 0.078 12.5 0.1 1 8.9 0.0 2.2 2 0 0 2 2 2 0 LexA DNA binding domain Phage_rep_org_N PF09681.5 AJA92494.1 - 0.083 12.4 3.2 0.68 9.5 0.2 2.5 1 1 1 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) DUF977 PF06163.6 AJA92494.1 - 0.1 12.3 0.3 0.21 11.3 0.1 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF977) HxlR PF01638.12 AJA92494.1 - 0.12 11.9 1.2 0.5 10.0 0.1 2.3 1 1 2 3 3 3 0 HxlR-like helix-turn-helix Fe_dep_repress PF01325.14 AJA92494.1 - 0.13 12.2 0.4 0.58 10.1 0.0 2.2 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.2 AJA92494.1 - 0.14 11.9 0.0 2.3 8.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain RPA_C PF08784.6 AJA92494.1 - 0.16 12.4 0.9 3.2 8.2 0.0 2.2 2 0 0 2 2 2 0 Replication protein A C terminal B-block_TFIIIC PF04182.7 AJA92494.1 - 0.26 11.1 3.3 1 9.2 0.6 2.5 2 1 0 2 2 2 0 B-block binding subunit of TFIIIC tRNA-synt_2d PF01409.15 AJA92495.1 - 8e-88 293.7 0.0 1.5e-87 292.9 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 AJA92495.1 - 2.1e-05 23.5 0.2 0.00074 18.3 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 AJA92495.1 - 0.00013 21.6 0.0 0.00031 20.3 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HTH_24 PF13412.1 AJA92495.1 - 0.002 17.4 0.3 0.019 14.3 0.1 2.8 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding HTH_9 PF08221.6 AJA92495.1 - 0.012 15.4 0.0 0.026 14.4 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain ABC2_membrane_3 PF12698.2 AJA92495.1 - 0.048 12.6 0.3 0.076 12.0 0.2 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein HTH_AsnC-type PF13404.1 AJA92495.1 - 0.09 12.3 0.1 0.25 10.9 0.0 1.8 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF1410 PF07198.6 AJA92496.1 - 0.0088 16.3 0.3 0.0088 16.3 0.2 2.6 3 1 0 3 3 3 1 Protein of unknown function (DUF1410) SLEI_Leptospira PF07620.6 AJA92496.1 - 5.5 7.0 5.7 2.2 8.2 0.9 2.4 2 0 0 2 2 2 0 SLEI Diphthamide_syn PF01866.12 AJA92498.1 - 5.7e-79 265.5 0.0 6.9e-79 265.2 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein DUF1938 PF09153.5 AJA92498.1 - 0.12 12.2 0.2 0.61 9.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1938) Archease PF01951.11 AJA92499.1 - 8.2e-33 113.2 3.9 9.1e-33 113.1 2.7 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) DUF2703 PF10865.3 AJA92499.1 - 0.073 12.9 0.6 0.15 12.0 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF2703) VitK2_biosynth PF02621.9 AJA92501.1 - 5.6e-70 235.4 0.0 6.3e-70 235.2 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis Prefoldin_2 PF01920.15 AJA92502.1 - 3.8e-20 71.6 22.6 4.2e-20 71.4 15.7 1.0 1 0 0 1 1 1 1 Prefoldin subunit KIP1 PF07765.7 AJA92502.1 - 0.31 10.8 5.3 3 7.7 0.1 2.5 2 1 1 3 3 3 0 KIP1-like protein Ribosomal_S2 PF00318.15 AJA92502.1 - 0.45 9.6 4.6 0.58 9.3 3.2 1.2 1 0 0 1 1 1 0 Ribosomal protein S2 IncA PF04156.9 AJA92502.1 - 0.99 8.9 18.3 1.4 8.5 12.7 1.1 1 0 0 1 1 1 0 IncA protein AAA_23 PF13476.1 AJA92502.1 - 1.4 9.1 17.9 2 8.6 12.4 1.1 1 0 0 1 1 1 0 AAA domain DUF2346 PF09803.4 AJA92502.1 - 2.2 8.1 5.3 0.72 9.7 0.7 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2346) AHSP PF09236.5 AJA92502.1 - 3 8.1 6.7 0.97 9.6 0.5 2.5 1 1 2 3 3 3 0 Alpha-haemoglobin stabilising protein CDC37_N PF03234.9 AJA92502.1 - 3.7 7.8 18.1 31 4.8 12.5 1.9 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding DUF4407 PF14362.1 AJA92502.1 - 4.5 6.1 6.4 5.3 5.8 4.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GBS_Bsp-like PF08481.5 AJA92503.1 - 0.055 13.3 0.0 10 6.1 0.0 2.1 2 0 0 2 2 2 0 GBS Bsp-like repeat Lipoprotein_17 PF04200.7 AJA92503.1 - 5.2 7.2 9.6 0.87 9.7 3.1 2.1 2 1 0 2 2 2 0 Lipoprotein associated domain Ribosomal_L3 PF00297.17 AJA92504.1 - 8.2e-56 189.2 3.3 9.6e-56 189.0 2.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 DUF35 PF01796.12 AJA92505.1 - 4.1e-13 49.3 0.2 5.8e-13 48.8 0.1 1.1 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 AJA92505.1 - 0.00021 21.0 0.0 0.00036 20.3 0.0 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.1 AJA92505.1 - 0.0073 15.4 1.0 2.6 7.3 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 AJA92505.1 - 0.0084 15.9 0.3 0.012 15.3 0.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 AJA92505.1 - 0.018 14.5 1.9 0.03 13.7 1.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF1802 PF08819.6 AJA92506.1 - 3.3e-44 150.6 0.5 3.6e-44 150.4 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) PIN PF01850.16 AJA92507.1 - 5.1e-07 30.0 0.1 7.4e-07 29.5 0.1 1.2 1 0 0 1 1 1 1 PIN domain zinc-ribbons_6 PF07191.7 AJA92507.1 - 0.0024 17.6 0.1 0.0052 16.5 0.1 1.5 1 0 0 1 1 1 1 zinc-ribbons UPF0278 PF08745.6 AJA92507.1 - 0.0026 17.0 0.3 0.12 11.6 0.0 2.1 1 1 1 2 2 2 1 UPF0278 family DUF3279 PF11682.3 AJA92507.1 - 0.0043 16.6 1.3 0.015 14.9 0.6 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF3279) PIN_2 PF10130.4 AJA92507.1 - 0.0046 17.0 0.7 0.0078 16.2 0.5 1.3 1 1 0 1 1 1 1 PIN domain RecR PF02132.10 AJA92507.1 - 0.0076 15.6 0.1 0.018 14.4 0.1 1.6 1 0 0 1 1 1 1 RecR protein DUF4411 PF14367.1 AJA92507.1 - 0.0093 15.6 0.4 0.015 15.0 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4411) zf-C3HC4_3 PF13920.1 AJA92507.1 - 0.013 15.1 0.9 0.021 14.4 0.6 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 AJA92507.1 - 0.023 14.5 0.5 0.038 13.8 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 AJA92507.1 - 0.026 13.7 2.5 0.054 12.7 1.7 1.5 1 0 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.4 AJA92507.1 - 0.047 13.3 3.2 2.9 7.6 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-RING_5 PF14634.1 AJA92507.1 - 0.092 12.4 2.6 0.17 11.6 1.8 1.4 1 0 0 1 1 1 0 zinc-RING finger domain NOB1_Zn_bind PF08772.6 AJA92507.1 - 0.1 12.4 1.8 0.2 11.4 1.3 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Cript PF10235.4 AJA92507.1 - 0.16 12.3 3.0 0.63 10.4 2.1 2.0 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT Nudix_N_2 PF14803.1 AJA92507.1 - 0.19 11.4 1.7 14 5.5 0.2 2.4 2 0 0 2 2 2 0 Nudix N-terminal zf-C2H2_jaz PF12171.3 AJA92507.1 - 0.23 11.6 0.4 0.23 11.6 0.3 2.0 1 1 1 2 2 2 0 Zinc-finger double-stranded RNA-binding zinc_ribbon_2 PF13240.1 AJA92507.1 - 0.25 10.8 5.2 4.9 6.7 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF4428 PF14471.1 AJA92507.1 - 0.28 10.9 5.6 2.9 7.6 0.5 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) zf-C3HC4_2 PF13923.1 AJA92507.1 - 0.32 11.0 2.5 0.58 10.2 1.7 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2 PF00096.21 AJA92507.1 - 0.4 11.1 3.2 3.9 7.9 0.2 2.5 1 1 1 2 2 2 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.5 AJA92507.1 - 0.68 9.9 3.6 3.1 7.8 1.7 2.5 2 1 0 2 2 1 0 Zinc ribbon domain zf-C2H2_4 PF13894.1 AJA92507.1 - 0.71 10.3 3.9 25 5.5 2.7 2.4 1 1 0 1 1 1 0 C2H2-type zinc finger zf-C2HC_2 PF13913.1 AJA92507.1 - 0.72 9.5 3.8 13 5.6 0.8 2.3 1 1 1 2 2 2 0 zinc-finger of a C2HC-type Cys_rich_KTR PF14205.1 AJA92507.1 - 0.74 9.3 4.9 0.52 9.7 0.4 2.7 1 1 1 2 2 2 0 Cysteine-rich KTR zf-C2H2_6 PF13912.1 AJA92507.1 - 1.1 9.2 4.7 0.76 9.7 0.4 2.3 1 1 1 2 2 2 0 C2H2-type zinc finger Radical_SAM PF04055.16 AJA92509.1 - 5.7e-17 62.3 0.0 1.9e-16 60.7 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily 5-FTHF_cyc-lig PF01812.15 AJA92510.1 - 6.8e-41 140.0 0.0 7.7e-41 139.9 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Sulfotransfer_2 PF03567.9 AJA92510.1 - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Sulfotransferase family TENA_THI-4 PF03070.11 AJA92511.1 - 2e-15 57.1 0.2 2.3e-15 56.9 0.1 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Haem_oxygenas_2 PF14518.1 AJA92511.1 - 7.8e-10 38.8 0.1 5.8e-09 36.0 0.0 2.0 1 1 1 2 2 2 1 Iron-containing redox enzyme Gly_radical PF01228.16 AJA92511.1 - 0.044 14.1 0.0 0.1 12.9 0.0 1.6 1 0 0 1 1 1 0 Glycine radical Death PF00531.17 AJA92511.1 - 0.098 12.4 0.0 0.27 11.0 0.0 1.8 1 0 0 1 1 1 0 Death domain NDK PF00334.14 AJA92512.1 - 1.2e-53 180.4 0.1 1.4e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GtrA PF04138.9 AJA92513.1 - 8.9e-24 83.6 12.9 1e-23 83.4 8.9 1.0 1 0 0 1 1 1 1 GtrA-like protein Rhomboid PF01694.17 AJA92513.1 - 0.35 10.8 11.8 6.5 6.7 8.2 2.3 1 1 0 1 1 1 0 Rhomboid family AMP-binding PF00501.23 AJA92514.1 - 4.5e-96 321.7 0.0 5.4e-96 321.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 AJA92514.1 - 4.8e-20 72.2 0.0 9.1e-20 71.3 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF3201 PF11447.3 AJA92514.1 - 0.021 14.2 0.0 0.043 13.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3201) Cyclophil_like PF04126.8 AJA92515.1 - 2e-10 40.2 0.0 2.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin-like Ubie_methyltran PF01209.13 AJA92516.1 - 1.5e-21 76.6 0.0 1.7e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 AJA92516.1 - 1.5e-12 47.8 0.0 2.1e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 AJA92516.1 - 2.4e-07 30.4 0.0 3.8e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92516.1 - 3.9e-07 29.9 0.0 5.3e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92516.1 - 4.5e-07 30.4 0.0 6.6e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92516.1 - 6.3e-07 29.6 0.0 9.2e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92516.1 - 6.6e-05 23.3 0.0 0.0001 22.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 AJA92516.1 - 0.012 15.0 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_8 PF05148.10 AJA92516.1 - 0.018 14.6 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase CMAS PF02353.15 AJA92516.1 - 0.032 13.3 0.0 0.051 12.6 0.0 1.5 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ribosomal_S4e PF00900.15 AJA92517.1 - 1.5e-18 66.1 0.2 4.6e-18 64.6 0.2 1.9 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 AJA92517.1 - 1.5e-08 34.3 1.1 3e-08 33.3 0.7 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.20 AJA92517.1 - 0.0038 16.6 0.1 0.0076 15.6 0.0 1.5 1 0 0 1 1 1 1 S4 domain Pox_T4_C PF04490.7 AJA92518.1 - 0.096 12.4 0.3 0.087 12.5 0.2 1.2 1 0 0 1 1 1 0 Poxvirus T4 protein, C terminus dsDNA_bind PF01984.15 AJA92519.1 - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Double-stranded DNA-binding domain EF-1_beta_acid PF10587.4 AJA92519.1 - 0.013 15.6 2.5 0.029 14.5 1.8 1.6 1 0 0 1 1 1 0 Eukaryotic elongation factor 1 beta central acidic region DUF535 PF04393.8 AJA92519.1 - 0.099 11.5 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF535) Pox_RNA_Pol_19 PF05320.7 AJA92519.1 - 0.66 9.6 4.5 2.5 7.8 0.0 2.7 1 1 2 3 3 3 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Pterin_bind PF00809.17 AJA92520.1 - 2.6e-35 121.7 0.8 6.8e-35 120.3 0.6 1.7 1 1 0 1 1 1 1 Pterin binding enzyme DnaJ PF00226.26 AJA92521.1 - 1.2e-23 82.6 5.3 2.5e-23 81.5 3.7 1.6 1 0 0 1 1 1 1 DnaJ domain SCIMP PF15050.1 AJA92521.1 - 0.028 14.3 0.1 0.064 13.1 0.0 1.6 2 0 0 2 2 2 0 SCIMP protein P12 PF12669.2 AJA92521.1 - 0.32 11.2 2.1 0.71 10.1 1.5 1.6 1 0 0 1 1 1 0 Virus attachment protein p12 family YMF19 PF02326.10 AJA92521.1 - 2.8 8.5 6.6 6.8 7.3 0.1 2.7 2 1 1 3 3 3 0 Plant ATP synthase F0 zinc_ribbon_6 PF14599.1 AJA92522.1 - 0.0038 16.9 17.4 0.49 10.2 0.6 4.0 2 2 2 4 4 4 3 Zinc-ribbon DUF4001 PF13165.1 AJA92522.1 - 0.012 15.2 4.7 0.48 10.1 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4001) Molybdop_Fe4S4 PF04879.11 AJA92522.1 - 0.015 15.0 8.0 0.11 12.2 0.9 2.3 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain DZR PF12773.2 AJA92522.1 - 0.15 11.8 15.4 1 9.2 2.8 2.3 2 0 0 2 2 2 0 Double zinc ribbon GFA PF04828.9 AJA92522.1 - 1.1 9.2 6.0 6.4 6.7 0.5 2.3 2 0 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme C1_1 PF00130.17 AJA92522.1 - 1.5 8.6 13.1 0.95 9.2 1.5 2.7 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-UBR PF02207.15 AJA92522.1 - 1.6 8.4 10.3 4 7.2 1.0 2.4 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) LIM PF00412.17 AJA92522.1 - 1.7 8.7 15.3 2.9 8.0 2.4 2.2 2 0 0 2 2 2 0 LIM domain DNA_RNApol_7kD PF03604.8 AJA92522.1 - 8.2 5.9 17.0 11 5.6 3.2 3.1 2 2 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit HTH_23 PF13384.1 AJA92524.1 - 0.00043 19.8 0.0 0.0012 18.3 0.0 1.9 1 1 0 1 1 1 1 Homeodomain-like domain TrmB PF01978.14 AJA92524.1 - 0.0044 16.6 0.1 0.29 10.8 0.0 2.2 1 1 1 2 2 2 2 Sugar-specific transcriptional regulator TrmB GntR PF00392.16 AJA92524.1 - 0.04 13.3 0.1 0.12 11.8 0.1 1.9 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.5 AJA92524.1 - 0.084 12.4 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain TPP_enzyme_N PF02776.13 AJA92525.1 - 3.6e-60 202.3 0.1 2.6e-59 199.5 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.17 AJA92525.1 - 1.3e-45 154.4 0.0 2.8e-45 153.4 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.16 AJA92525.1 - 2.5e-44 150.5 0.6 5.4e-44 149.4 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pyridox_oxidase PF01243.15 AJA92526.1 - 4.2e-15 55.5 0.0 5.6e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 AJA92526.1 - 0.017 14.9 0.0 0.025 14.4 0.0 1.4 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase ACPS PF01648.15 AJA92527.1 - 1.1e-15 57.3 0.9 1.4e-15 57.1 0.6 1.1 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily MTHFR PF02219.12 AJA92528.1 - 6.6e-08 31.9 0.0 5.4e-07 28.9 0.0 2.0 1 1 0 1 1 1 1 Methylenetetrahydrofolate reductase Aminotran_3 PF00202.16 AJA92529.1 - 3e-53 180.8 0.0 4.3e-53 180.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Ribosomal_L10 PF00466.15 AJA92530.1 - 2.5e-17 62.6 0.8 6.8e-17 61.2 0.5 1.8 1 1 0 1 1 1 1 Ribosomal protein L10 ATP-synt_B PF00430.13 AJA92530.1 - 0.12 12.1 7.9 0.3 10.8 5.5 1.6 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) CbtB PF09489.5 AJA92531.1 - 1.3e-07 31.3 11.4 1.2e-05 25.0 7.9 2.1 1 1 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) SecE PF00584.15 AJA92531.1 - 0.05 13.1 3.3 0.073 12.6 2.3 1.3 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex Spore_II_R PF09551.5 AJA92532.1 - 0.14 12.1 0.6 0.14 12.2 0.4 1.0 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) DUF1604 PF07713.8 AJA92532.1 - 0.22 11.3 0.9 0.22 11.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Methyltransf_31 PF13847.1 AJA92534.1 - 1.3e-23 83.2 0.7 2e-23 82.6 0.4 1.5 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 AJA92534.1 - 1.6e-20 73.2 0.8 1.5e-19 70.0 0.6 2.1 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 AJA92534.1 - 6.5e-18 65.0 0.0 1.1e-17 64.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92534.1 - 2.3e-16 60.3 0.0 3.9e-16 59.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92534.1 - 1.9e-14 53.8 0.0 3.7e-14 52.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92534.1 - 8.8e-14 51.5 0.0 1.7e-13 50.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92534.1 - 9.6e-13 48.4 0.0 1.8e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 AJA92534.1 - 5.2e-08 32.4 0.1 1.1e-07 31.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 AJA92534.1 - 4.8e-07 29.8 0.0 7.7e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 AJA92534.1 - 2.6e-06 26.6 0.0 4.6e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.6 AJA92534.1 - 3.4e-06 26.5 0.0 5.2e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.14 AJA92534.1 - 1.5e-05 24.6 0.0 2.4e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CheR PF01739.13 AJA92534.1 - 1.8e-05 24.1 0.7 0.013 14.7 0.1 2.6 1 1 1 2 2 2 2 CheR methyltransferase, SAM binding domain Fibrillarin PF01269.12 AJA92534.1 - 3.2e-05 22.9 0.0 5e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin CMAS PF02353.15 AJA92534.1 - 0.00024 20.3 0.1 0.00031 19.9 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.14 AJA92534.1 - 0.00031 20.7 0.1 0.00058 19.8 0.1 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase DREV PF05219.7 AJA92534.1 - 0.00066 18.6 0.0 0.00089 18.2 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase N6_N4_Mtase PF01555.13 AJA92534.1 - 0.0022 17.5 2.5 0.28 10.6 0.8 2.3 2 1 0 2 2 2 1 DNA methylase SieB PF14163.1 AJA92534.1 - 0.0026 17.3 0.4 0.056 13.0 0.1 2.7 3 0 0 3 3 3 1 Superinfection exclusion protein B Methyltransf_3 PF01596.12 AJA92534.1 - 0.0047 15.9 0.1 0.0078 15.2 0.1 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_32 PF13679.1 AJA92534.1 - 0.0067 16.1 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 AJA92534.1 - 0.011 15.2 0.0 0.036 13.6 0.0 1.8 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 GidB PF02527.10 AJA92534.1 - 0.012 14.7 0.1 0.03 13.4 0.1 1.8 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G Rsm22 PF09243.5 AJA92534.1 - 0.012 14.6 0.0 0.034 13.1 0.0 1.6 1 1 1 2 2 2 0 Mitochondrial small ribosomal subunit Rsm22 MetW PF07021.7 AJA92534.1 - 0.015 14.6 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW ADH_zinc_N PF00107.21 AJA92534.1 - 0.016 14.7 0.0 0.034 13.7 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase PrmA PF06325.8 AJA92534.1 - 0.02 14.0 0.0 0.032 13.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GCD14 PF08704.5 AJA92534.1 - 0.053 13.0 0.0 0.084 12.3 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Rhodanese PF00581.15 AJA92535.1 - 2.5e-15 56.8 0.0 3e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF3715 PF12509.3 AJA92535.1 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3715) DUF4147 PF13660.1 AJA92536.1 - 6.6e-65 218.5 0.0 8.9e-65 218.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.8 AJA92536.1 - 2.6e-29 101.4 0.1 6.5e-29 100.1 0.1 1.8 1 0 0 1 1 1 1 MOFRL family Peptidase_S8 PF00082.17 AJA92537.1 - 7.8e-34 117.1 0.0 1.7e-33 115.9 0.0 1.6 1 1 0 1 1 1 1 Subtilase family Big_3_4 PF13754.1 AJA92537.1 - 2e-08 34.3 0.1 0.0019 18.4 0.0 3.0 2 0 0 2 2 2 2 Bacterial Ig-like domain (group 3) DUF1034 PF06280.7 AJA92537.1 - 0.00045 20.5 2.9 0.00074 19.8 0.0 2.8 3 0 0 3 3 3 1 Fn3-like domain (DUF1034) DUF916 PF06030.7 AJA92537.1 - 0.00082 19.1 0.1 0.55 10.0 0.0 3.5 3 0 0 3 3 3 2 Bacterial protein of unknown function (DUF916) PurS PF02700.9 AJA92538.1 - 8.4e-16 57.7 0.2 9.2e-16 57.5 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase MMR_HSR1_C PF08438.5 AJA92539.1 - 3.2e-31 107.7 0.4 6.5e-31 106.7 0.3 1.6 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 AJA92539.1 - 2.1e-16 59.9 0.0 6.5e-16 58.3 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 AJA92539.1 - 1.8e-13 50.1 0.1 4.3e-13 48.8 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 AJA92539.1 - 2.5e-06 26.8 0.4 1.1e-05 24.8 0.1 2.3 3 0 0 3 3 3 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.8 AJA92539.1 - 0.057 13.2 0.1 0.17 11.7 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF933) Fe-ADH PF00465.14 AJA92540.1 - 2.3e-49 167.9 0.0 5.3e-49 166.7 0.0 1.5 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 AJA92540.1 - 4.4e-19 68.7 0.0 6.4e-19 68.2 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 AJA92540.1 - 5.7e-06 25.4 0.0 0.0015 17.4 0.0 2.2 2 0 0 2 2 2 2 3-dehydroquinate synthase NUC194 PF08163.7 AJA92540.1 - 0.15 10.8 0.0 0.25 10.1 0.0 1.3 1 0 0 1 1 1 0 NUC194 domain DUF202 PF02656.10 AJA92541.1 - 0.54 10.5 13.9 3.2 8.0 1.2 4.0 3 2 1 4 4 4 0 Domain of unknown function (DUF202) DUF1459 PF07312.6 AJA92541.1 - 0.56 10.1 4.7 0.15 12.0 0.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1459) CDC37_M PF08565.6 AJA92542.1 - 0.0053 16.2 0.1 0.0056 16.1 0.1 1.1 1 0 0 1 1 1 1 Cdc37 Hsp90 binding domain Zn_ribbon_2 PF12674.2 AJA92542.1 - 0.0087 16.3 0.2 0.0087 16.3 0.2 1.8 2 0 0 2 2 2 1 Putative zinc ribbon domain DUF1272 PF06906.6 AJA92542.1 - 0.3 10.9 9.1 0.074 12.9 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zinc_ribbon_2 PF13240.1 AJA92542.1 - 0.52 9.8 8.8 1.3 8.5 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 AJA92542.1 - 1.2 8.9 12.2 9.2 6.1 8.5 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF2318 PF10080.4 AJA92542.1 - 1.4 8.7 6.7 3 7.6 4.7 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF3795 PF12675.2 AJA92542.1 - 4.2 7.6 12.7 57 3.9 8.8 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3795) DnaJ_CXXCXGXG PF00684.14 AJA92542.1 - 6.1 6.9 10.0 9.7 6.3 6.9 1.4 1 0 0 1 1 1 0 DnaJ central domain DHODB_Fe-S_bind PF10418.4 AJA92542.1 - 7.9 6.0 7.2 1.3 8.5 0.4 2.5 2 1 1 3 3 3 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Cytochrom_c3_2 PF14537.1 AJA92542.1 - 8.6 6.7 9.8 0.25 11.7 2.0 1.8 1 1 1 2 2 2 0 Cytochrome c3 UPF0086 PF01868.11 AJA92543.1 - 1.9e-16 59.4 0.3 2.1e-16 59.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 DHQS PF01959.11 AJA92543.1 - 0.043 12.5 0.1 0.048 12.3 0.0 1.1 1 0 0 1 1 1 0 3-dehydroquinate synthase (EC 4.6.1.3) Pur_DNA_glyco PF02245.11 AJA92544.1 - 3.7e-59 198.9 0.0 4e-59 198.8 0.0 1.0 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) RHH_1 PF01402.16 AJA92545.1 - 0.021 14.7 0.0 0.022 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family CBS PF00571.23 AJA92546.1 - 7.9e-15 54.3 0.1 8.2e-10 38.3 0.0 2.2 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.17 AJA92546.1 - 1.6e-13 50.2 0.2 2.7e-13 49.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 AJA92546.1 - 4.7e-09 36.1 0.2 9.8e-09 35.1 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 AJA92546.1 - 2.5e-08 34.0 0.0 3.8e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.1 AJA92546.1 - 0.01 15.6 0.1 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.1 AJA92546.1 - 0.018 15.2 0.5 0.089 13.0 0.1 2.2 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.11 AJA92546.1 - 0.028 13.7 0.0 0.053 12.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_25 PF13413.1 AJA92546.1 - 0.033 13.8 0.0 0.057 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Pou PF00157.12 AJA92546.1 - 0.14 11.8 0.1 1.3 8.7 0.0 2.2 2 1 0 2 2 2 0 Pou domain - N-terminal to homeobox domain DUF3953 PF13129.1 AJA92547.1 - 0.021 14.4 1.4 0.27 10.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3953) DUF1772 PF08592.6 AJA92547.1 - 0.029 14.0 0.0 0.033 13.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) DUF872 PF05915.7 AJA92547.1 - 0.069 13.0 0.1 0.082 12.7 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) P12 PF12669.2 AJA92547.1 - 2 8.7 0.0 2 8.7 0.0 2.4 3 0 0 3 3 3 0 Virus attachment protein p12 family DUF3185 PF11381.3 AJA92547.1 - 5 6.9 6.2 16 5.3 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) Acetyltransf_1 PF00583.19 AJA92548.1 - 1.2e-10 41.2 0.0 3.1e-10 39.9 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 AJA92548.1 - 1.2e-06 28.6 0.0 2.2e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 AJA92548.1 - 7.6e-05 22.7 1.0 0.00014 21.7 0.1 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 AJA92548.1 - 0.00028 20.7 0.0 0.00047 20.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 AJA92548.1 - 0.00048 19.8 0.0 0.00083 19.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 AJA92548.1 - 0.0016 18.3 0.0 0.0029 17.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 AJA92548.1 - 0.0026 17.8 0.0 0.0081 16.2 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 AJA92548.1 - 0.0087 16.2 0.4 0.024 14.8 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Glyco_trans_1_3 PF13528.1 AJA92549.1 - 4.9e-17 62.0 0.0 7.4e-17 61.5 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 AJA92549.1 - 1.7e-13 50.5 0.0 6.6e-13 48.6 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase family 28 C-terminal domain DUF3797 PF12677.2 AJA92549.1 - 0.025 14.1 0.0 0.059 12.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) Pro_isomerase PF00160.16 AJA92550.1 - 2.5e-44 151.2 0.1 4.7e-44 150.3 0.0 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3573 PF12097.3 AJA92551.1 - 0.016 13.8 0.1 0.022 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DivIVA PF05103.8 AJA92551.1 - 0.03 14.3 1.4 0.07 13.1 0.3 1.9 2 0 0 2 2 2 0 DivIVA protein Golgin_A5 PF09787.4 AJA92551.1 - 0.053 12.0 0.3 0.085 11.3 0.2 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 Snf7 PF03357.16 AJA92551.1 - 0.29 10.5 3.6 1.2 8.4 2.5 1.8 1 1 0 1 1 1 0 Snf7 DoxX PF07681.7 AJA92552.1 - 5.2e-14 52.4 7.5 5.2e-14 52.4 5.2 1.6 1 1 1 2 2 2 2 DoxX DoxD PF04173.8 AJA92552.1 - 3.6e-07 29.9 0.8 3.6e-07 29.9 0.6 1.5 2 0 0 2 2 2 1 TQO small subunit DoxD DoxX_2 PF13564.1 AJA92552.1 - 0.002 18.1 6.1 0.0028 17.6 4.2 1.4 1 1 0 1 1 1 1 DoxX-like family DUF2892 PF11127.3 AJA92552.1 - 4.3 7.2 12.8 1.6 8.6 4.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2892) GATase PF00117.23 AJA92553.1 - 5.4e-33 114.0 0.0 6.2e-33 113.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 AJA92553.1 - 5.9e-07 29.1 0.1 7e-06 25.6 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 AJA92553.1 - 3.5e-05 23.5 0.0 0.00019 21.1 0.0 1.9 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.9 AJA92553.1 - 0.0028 17.2 0.0 0.0038 16.8 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain ParA PF10609.4 AJA92554.1 - 2.8e-36 123.2 0.2 6e-36 122.1 0.1 1.6 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 AJA92554.1 - 1.3e-19 70.4 0.1 2e-19 69.7 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF59 PF01883.14 AJA92554.1 - 2.4e-18 65.8 2.4 4.5e-18 64.9 0.1 2.7 3 1 0 3 3 3 1 Domain of unknown function DUF59 AAA_31 PF13614.1 AJA92554.1 - 2.4e-11 43.7 0.1 1.1e-10 41.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain MipZ PF09140.6 AJA92554.1 - 3.3e-08 32.9 0.0 5.1e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.1 AJA92554.1 - 4e-07 29.8 0.6 0.0043 16.6 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.13 AJA92554.1 - 7.9e-06 25.2 0.1 0.0013 17.9 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 AJA92554.1 - 4.6e-05 22.6 1.7 4.6e-05 22.6 1.2 2.1 3 0 0 3 3 3 1 Anion-transporting ATPase VirC1 PF07015.6 AJA92554.1 - 0.0027 16.8 0.4 0.0066 15.5 0.2 1.7 1 1 0 1 1 1 1 VirC1 protein FTHFS PF01268.14 AJA92554.1 - 0.0089 14.0 0.0 0.012 13.6 0.0 1.1 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase AAA_25 PF13481.1 AJA92554.1 - 0.013 14.9 0.5 0.031 13.6 0.3 1.6 1 0 0 1 1 1 0 AAA domain ArgK PF03308.11 AJA92554.1 - 0.019 13.7 0.3 0.031 13.0 0.2 1.3 1 0 0 1 1 1 0 ArgK protein APS_kinase PF01583.15 AJA92554.1 - 0.11 12.1 0.1 0.22 11.1 0.1 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase YhjQ PF06564.7 AJA92554.1 - 0.15 11.4 0.3 0.34 10.2 0.2 1.6 1 1 0 1 1 1 0 YhjQ protein DUF258 PF03193.11 AJA92554.1 - 0.17 11.0 0.1 0.31 10.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 DUF2024 PF09630.5 AJA92555.1 - 2.3e-37 126.5 1.4 2.5e-37 126.4 1.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) RE_TdeIII PF09520.5 AJA92555.1 - 0.0083 15.4 0.0 0.009 15.3 0.0 1.1 1 0 0 1 1 1 1 Type II restriction endonuclease, TdeIII AA_kinase PF00696.23 AJA92556.1 - 8.8e-53 179.3 0.4 1.3e-52 178.7 0.3 1.3 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.1 AJA92556.1 - 2.8e-14 52.3 3.7 4.8e-08 32.3 0.1 3.3 4 0 0 4 4 4 2 ACT domain ACT PF01842.20 AJA92556.1 - 2.1e-13 49.4 0.4 5e-06 25.8 0.1 2.7 2 0 0 2 2 2 2 ACT domain EzrA PF06160.7 AJA92556.1 - 0.0041 15.3 0.2 0.0064 14.7 0.1 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF4364 PF14277.1 AJA92556.1 - 0.026 14.1 0.4 0.066 12.8 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) MMR_HSR1_C PF08438.5 AJA92557.1 - 2.9e-32 111.1 0.6 1e-31 109.3 0.1 2.0 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 AJA92557.1 - 2.3e-17 63.0 0.0 5.2e-16 58.6 0.0 2.5 1 1 1 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 AJA92557.1 - 1.6e-08 34.1 0.3 0.0025 17.2 0.1 2.6 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain TGS PF02824.16 AJA92557.1 - 1.6e-06 27.8 0.0 3.1e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 AJA92557.1 - 1.4e-05 24.4 0.1 0.00033 19.9 0.1 2.6 3 0 0 3 3 3 1 Ferrous iron transport protein B Dynamin_N PF00350.18 AJA92557.1 - 9.7e-05 22.2 2.0 0.12 12.1 0.0 3.3 1 1 2 3 3 3 2 Dynamin family Miro PF08477.8 AJA92557.1 - 0.015 15.8 0.2 0.12 12.8 0.1 2.6 2 1 0 2 2 2 0 Miro-like protein YchF-GTPase_C PF06071.8 AJA92557.1 - 0.061 13.1 0.0 0.22 11.3 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF933) MobB PF03205.9 AJA92557.1 - 0.1 12.3 0.2 0.5 10.0 0.1 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B PduV-EutP PF10662.4 AJA92557.1 - 0.13 11.7 1.0 19 4.6 0.1 3.8 3 1 1 4 4 4 0 Ethanolamine utilisation - propanediol utilisation AAA_23 PF13476.1 AJA92557.1 - 0.22 11.8 4.8 0.81 9.9 3.4 1.9 1 1 0 1 1 1 0 AAA domain Prok-JAB PF14464.1 AJA92558.1 - 2.8e-10 39.6 0.0 3.3e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.10 AJA92558.1 - 0.03 13.9 0.1 0.064 12.9 0.0 1.5 2 0 0 2 2 2 0 RadC-like JAB domain Toxin-JAB1 PF15659.1 AJA92558.1 - 0.053 13.4 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 JAB-like toxin 1 S4 PF01479.20 AJA92559.1 - 3.6e-12 45.4 0.7 7.9e-12 44.4 0.0 1.9 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.14 AJA92559.1 - 9e-08 32.4 1.6 1.5e-07 31.7 0.9 1.5 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain DUF4418 PF14387.1 AJA92560.1 - 0.25 11.1 3.7 0.53 10.0 2.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4418) NAD_binding_1 PF00175.16 AJA92561.1 - 4e-14 53.1 0.0 8.8e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 AJA92561.1 - 1.3e-10 41.2 0.0 2e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 AJA92561.1 - 0.076 12.9 0.1 0.29 11.0 0.0 1.8 1 1 0 2 2 2 0 Ferric reductase NAD binding domain F420_oxidored PF03807.12 AJA92562.1 - 1.2e-17 64.1 0.0 1.9e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 AJA92562.1 - 0.00034 20.3 0.1 0.00059 19.6 0.1 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Semialdhyde_dh PF01118.19 AJA92562.1 - 0.0011 19.2 0.0 0.0023 18.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain ApbA PF02558.11 AJA92562.1 - 0.012 15.1 0.0 0.02 14.3 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DapB_N PF01113.15 AJA92562.1 - 0.019 14.9 0.2 0.065 13.1 0.0 1.9 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus adh_short PF00106.20 AJA92562.1 - 0.032 14.1 0.1 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase DUF1284 PF06935.6 AJA92562.1 - 0.042 14.0 0.1 0.063 13.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) PDH PF02153.12 AJA92562.1 - 0.053 12.3 0.2 0.09 11.6 0.1 1.6 1 1 0 1 1 1 0 Prephenate dehydrogenase ABC_tran PF00005.22 AJA92563.1 - 9.8e-34 116.5 0.2 1.6e-33 115.8 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 AJA92563.1 - 3e-07 30.7 0.1 0.0069 16.3 0.5 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 AJA92563.1 - 5.5e-07 29.0 1.1 2e-06 27.1 0.8 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 AJA92563.1 - 2.1e-05 23.9 0.2 4.2e-05 22.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 AJA92563.1 - 4.7e-05 22.6 0.1 8.6e-05 21.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 AJA92563.1 - 9.2e-05 22.5 1.6 0.00052 20.0 1.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 AJA92563.1 - 0.00019 20.9 0.1 0.0071 15.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 AJA92563.1 - 0.001 18.1 0.1 0.13 11.2 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_23 PF13476.1 AJA92563.1 - 0.0018 18.6 0.3 0.0021 18.4 0.2 1.6 1 1 0 1 1 1 1 AAA domain KaiC PF06745.8 AJA92563.1 - 0.0027 16.8 0.1 0.1 11.7 0.0 2.2 2 0 0 2 2 2 1 KaiC AAA_33 PF13671.1 AJA92563.1 - 0.0043 16.9 1.2 0.015 15.1 0.8 2.0 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 AJA92563.1 - 0.0049 16.3 2.0 0.007 15.8 1.1 1.6 1 1 1 2 2 2 1 AAA-like domain T2SE PF00437.15 AJA92563.1 - 0.0054 15.6 0.0 0.0096 14.8 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.13 AJA92563.1 - 0.0057 16.1 0.1 0.0091 15.4 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family G-alpha PF00503.15 AJA92563.1 - 0.0057 15.4 0.0 0.0057 15.4 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit Zeta_toxin PF06414.7 AJA92563.1 - 0.0075 15.3 0.3 0.07 12.2 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin AAA_22 PF13401.1 AJA92563.1 - 0.0079 16.3 0.2 0.013 15.6 0.1 1.7 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 AJA92563.1 - 0.0083 16.0 1.1 0.013 15.4 0.7 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_30 PF13604.1 AJA92563.1 - 0.0086 15.6 0.3 0.19 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.4 AJA92563.1 - 0.013 14.0 0.4 0.048 12.2 0.0 2.0 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_17 PF13207.1 AJA92563.1 - 0.015 16.1 0.6 0.021 15.6 0.4 1.8 1 1 0 1 1 1 0 AAA domain MobB PF03205.9 AJA92563.1 - 0.024 14.3 0.4 0.083 12.5 0.1 1.9 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.7 AJA92563.1 - 0.027 14.1 0.4 0.061 12.9 0.1 1.7 1 1 0 1 1 1 0 NACHT domain Arch_ATPase PF01637.13 AJA92563.1 - 0.032 13.9 0.0 0.078 12.6 0.0 1.7 2 0 0 2 2 2 0 Archaeal ATPase AAA_13 PF13166.1 AJA92563.1 - 0.042 12.3 0.1 2.5 6.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.18 AJA92563.1 - 0.051 13.3 0.9 0.27 11.0 0.1 2.1 2 0 0 2 2 2 0 Dynamin family Thioredox_DsbH PF03190.10 AJA92563.1 - 0.053 13.2 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF255 APS_kinase PF01583.15 AJA92563.1 - 0.056 13.1 0.0 0.091 12.4 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase SbcCD_C PF13558.1 AJA92563.1 - 0.062 13.2 0.0 0.96 9.4 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit T4SS-DNA_transf PF02534.9 AJA92563.1 - 0.066 11.7 0.0 0.075 11.5 0.0 1.2 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer Miro PF08477.8 AJA92563.1 - 0.068 13.6 0.0 0.16 12.4 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein cobW PF02492.14 AJA92563.1 - 0.08 12.3 2.4 0.15 11.5 0.4 2.1 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.1 AJA92563.1 - 0.2 11.9 1.4 0.38 11.0 1.0 1.8 1 1 0 1 1 1 0 AAA domain eRF1_2 PF03464.10 AJA92564.1 - 3.7e-30 104.9 0.1 7.8e-29 100.6 0.0 2.4 1 1 1 2 2 2 1 eRF1 domain 2 eRF1_1 PF03463.10 AJA92564.1 - 8.2e-19 67.4 0.1 2e-18 66.2 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 AJA92564.1 - 1.3e-17 64.0 3.7 3e-17 62.8 0.7 2.5 2 0 0 2 2 2 1 eRF1 domain 3 Ribosomal_L7Ae PF01248.21 AJA92564.1 - 0.0019 17.6 0.1 0.0049 16.3 0.1 1.7 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YmgB PF10798.3 AJA92564.1 - 0.071 12.9 0.2 0.91 9.3 0.0 2.5 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR DUF2341 PF10102.4 AJA92565.1 - 1.9e-08 34.3 2.4 2.5e-08 33.9 0.5 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF2341) Methyltransf_16 PF10294.4 AJA92565.1 - 0.14 11.6 0.9 15 4.9 0.0 2.9 4 0 0 4 4 4 0 Putative methyltransferase Ribosomal_L2_C PF03947.13 AJA92567.1 - 6.6e-33 113.2 0.6 1.1e-32 112.5 0.4 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 AJA92567.1 - 3.2e-06 27.0 0.0 1.1e-05 25.3 0.0 2.0 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Pyr_redox_2 PF07992.9 AJA92568.1 - 5.6e-33 114.5 0.0 9.1e-33 113.8 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 AJA92568.1 - 7.9e-19 67.8 1.4 1.3e-17 63.9 0.1 2.7 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 AJA92568.1 - 1e-15 58.3 1.0 4.8e-12 46.3 0.0 3.1 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 AJA92568.1 - 1e-07 31.2 1.0 0.00069 18.6 0.0 3.0 3 0 0 3 3 3 2 FAD dependent oxidoreductase Thi4 PF01946.12 AJA92568.1 - 2.3e-06 26.8 0.2 0.0098 15.0 0.0 2.7 2 1 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.19 AJA92568.1 - 9.3e-06 24.7 1.8 0.00026 19.9 0.0 3.1 2 1 0 2 2 2 1 FAD binding domain K_oxygenase PF13434.1 AJA92568.1 - 1.3e-05 24.2 0.3 0.066 12.1 0.0 3.1 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.17 AJA92568.1 - 0.0003 19.7 7.8 0.0099 14.7 0.0 4.2 3 1 1 5 5 5 1 Glucose inhibited division protein A NAD_binding_9 PF13454.1 AJA92568.1 - 0.00068 19.4 2.1 0.4 10.4 0.0 3.3 3 0 0 3 3 3 1 FAD-NAD(P)-binding FAD_binding_3 PF01494.14 AJA92568.1 - 0.0015 17.6 0.3 0.19 10.7 0.0 2.8 2 1 1 3 3 3 1 FAD binding domain HI0933_like PF03486.9 AJA92568.1 - 0.0017 16.8 2.9 0.014 13.9 0.0 3.2 3 1 1 4 4 4 1 HI0933-like protein FAD_oxidored PF12831.2 AJA92568.1 - 0.003 16.7 0.6 0.091 11.8 0.0 2.5 3 0 0 3 3 3 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.1 AJA92568.1 - 0.0041 17.3 0.2 0.043 14.0 0.0 2.3 2 1 0 2 2 2 1 Putative NAD(P)-binding Lycopene_cycl PF05834.7 AJA92568.1 - 0.0051 15.7 1.9 3.8 6.3 0.1 3.3 3 1 1 4 4 4 2 Lycopene cyclase protein NAD_binding_8 PF13450.1 AJA92568.1 - 0.013 15.4 0.1 0.06 13.3 0.0 2.0 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.9 AJA92568.1 - 0.068 11.7 0.4 0.54 8.8 0.1 2.4 3 0 0 3 3 3 0 Tryptophan halogenase P-II PF00543.17 AJA92569.1 - 1.1e-11 45.0 0.4 1.4e-11 44.7 0.3 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ribosomal_L18p PF00861.17 AJA92570.1 - 1.4e-21 76.9 0.7 1.7e-21 76.5 0.5 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Methyltransf_27 PF13708.1 AJA92571.1 - 0.0014 18.1 0.2 0.0022 17.5 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Baculo_19 PF04798.7 AJA92571.1 - 0.018 14.4 0.3 0.26 10.6 0.1 2.4 2 1 1 3 3 3 0 Baculovirus 19 kDa protein conserved region TK PF00265.13 AJA92571.1 - 0.1 12.1 2.2 2.3 7.7 0.6 2.1 1 1 1 2 2 2 0 Thymidine kinase CARDB PF07705.6 AJA92572.1 - 0.0006 19.8 7.0 0.47 10.5 2.4 3.7 2 1 1 3 3 3 2 CARDB NPCBM_assoc PF10633.4 AJA92572.1 - 0.0013 18.6 0.3 1.4 9.0 0.0 4.0 3 1 0 4 4 4 1 NPCBM-associated, NEW3 domain of alpha-galactosidase EPSP_synthase PF00275.15 AJA92572.1 - 0.014 13.8 0.0 0.022 13.2 0.0 1.2 1 0 0 1 1 1 0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Sec23_BS PF08033.7 AJA92572.1 - 0.03 14.8 0.1 0.085 13.3 0.1 1.8 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain DUF11 PF01345.13 AJA92572.1 - 0.051 13.6 2.2 9.4 6.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function DUF11 DUF1034 PF06280.7 AJA92572.1 - 0.082 13.3 0.5 0.75 10.2 0.1 2.8 2 1 0 2 2 2 0 Fn3-like domain (DUF1034) eIF-5a PF01287.15 AJA92573.1 - 2e-11 43.6 2.9 2.6e-11 43.2 2.0 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 AJA92573.1 - 0.032 14.1 0.0 0.2 11.5 0.0 2.1 2 0 0 2 2 2 0 Elongation factor P (EF-P) KOW-like domain Glycos_transf_1 PF00534.15 AJA92574.1 - 2.6e-26 92.0 0.0 6.3e-26 90.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 AJA92574.1 - 7.5e-19 68.2 0.0 1.2e-18 67.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 AJA92574.1 - 3.5e-08 33.6 0.0 8e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 PmrD PF11183.3 AJA92574.1 - 0.04 13.7 0.0 0.093 12.5 0.0 1.6 1 0 0 1 1 1 0 Polymyxin resistance protein PmrD DUF72 PF01904.13 AJA92574.1 - 0.05 13.3 0.0 0.07 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF72 NAD_binding_10 PF13460.1 AJA92575.1 - 1.5e-19 70.7 0.0 2.1e-19 70.2 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 AJA92575.1 - 9.1e-14 51.2 0.0 1.5e-13 50.5 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.16 AJA92575.1 - 1.8e-12 47.1 0.1 1.3e-11 44.3 0.1 2.1 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 AJA92575.1 - 1.3e-07 30.6 0.0 2.4e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA92575.1 - 0.00074 18.4 0.0 0.0016 17.3 0.0 1.5 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 AJA92575.1 - 0.00092 18.2 0.2 0.0027 16.6 0.0 1.8 2 0 0 2 2 2 1 Male sterility protein adh_short PF00106.20 AJA92575.1 - 0.0045 16.9 0.0 0.0089 15.9 0.0 1.5 1 0 0 1 1 1 1 short chain dehydrogenase 2-Hacid_dh_C PF02826.14 AJA92575.1 - 0.013 14.7 0.0 0.031 13.4 0.0 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.10 AJA92575.1 - 0.066 12.0 0.2 0.21 10.4 0.1 1.8 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_2 PF03446.10 AJA92575.1 - 0.073 12.9 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase CGI-121 PF08617.5 AJA92576.1 - 7.6e-09 35.4 9.1 7.6e-09 35.4 6.3 1.6 2 0 0 2 2 2 1 Kinase binding protein CGI-121 ThiS PF02597.15 AJA92576.1 - 1.1e-08 35.3 0.2 4.1e-08 33.5 0.0 2.1 3 0 0 3 3 3 1 ThiS family Urm1 PF09138.6 AJA92576.1 - 0.019 15.0 1.1 0.05 13.7 0.1 2.3 2 1 0 2 2 2 0 Urm1 (Ubiquitin related modifier) TGS PF02824.16 AJA92576.1 - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 TGS domain Endotoxin_C PF03944.9 AJA92576.1 - 0.19 11.8 5.6 0.046 13.8 1.3 1.8 2 0 0 2 2 2 0 delta endotoxin Peptidase_M24 PF00557.19 AJA92578.1 - 6.4e-55 185.9 0.0 1e-54 185.2 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 AJA92578.1 - 6.1e-09 36.4 0.0 1.3e-08 35.4 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Toxin-deaminase PF14424.1 AJA92578.1 - 0.21 11.5 3.8 0.42 10.5 0.2 2.3 1 1 1 2 2 2 0 The BURPS668_1122 family of deaminases DnaJ PF00226.26 AJA92579.1 - 2.3e-18 65.6 3.5 5.6e-18 64.4 2.4 1.7 1 0 0 1 1 1 1 DnaJ domain Fer4_15 PF13459.1 AJA92579.1 - 2.5e-12 47.1 1.2 5.3e-12 46.1 0.9 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 AJA92579.1 - 1.2e-09 38.4 1.8 1.2e-09 38.4 1.2 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_19 PF06902.6 AJA92579.1 - 0.00026 20.7 1.0 0.00059 19.6 0.7 1.6 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4 PF00037.22 AJA92579.1 - 0.063 12.9 9.3 0.21 11.2 3.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 AJA92579.1 - 0.15 12.0 3.2 0.38 10.7 2.2 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_7 PF12838.2 AJA92579.1 - 0.19 12.1 4.4 2 8.8 1.3 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF4548 PF15081.1 AJA92579.1 - 0.21 11.1 1.6 0.86 9.1 0.1 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4548) CCER1 PF15482.1 AJA92579.1 - 0.51 9.9 5.1 1.4 8.5 3.5 1.7 1 1 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 GatB_N PF02934.10 AJA92581.1 - 1.3e-70 237.5 0.1 2.1e-70 236.8 0.1 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 AJA92581.1 - 2.5e-19 69.4 9.6 2.5e-19 69.4 6.7 2.7 3 0 0 3 3 3 1 GatB domain GAD PF02938.9 AJA92581.1 - 1.2e-07 31.8 1.0 8.9e-07 28.9 0.4 2.8 2 0 0 2 2 2 1 GAD domain YqeY PF09424.5 AJA92581.1 - 0.0011 18.8 4.3 0.0011 18.8 3.0 2.2 2 0 0 2 2 2 1 Yqey-like protein FdhE PF04216.7 AJA92581.1 - 0.14 11.8 0.3 0.28 10.8 0.0 1.5 2 0 0 2 2 2 0 Protein involved in formate dehydrogenase formation FumaraseC_C PF10415.4 AJA92582.1 - 0.15 12.1 0.7 0.3 11.1 0.2 1.7 2 0 0 2 2 2 0 Fumarase C C-terminus DUF95 PF01944.12 AJA92583.1 - 3e-11 43.2 11.6 3.9e-11 42.8 8.1 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF95 ETRAMP PF09716.5 AJA92583.1 - 1.5 8.8 5.5 5 7.1 3.8 2.0 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4046 PF13255.1 AJA92584.1 - 0.0085 14.8 0.4 0.012 14.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4046) SprT-like PF10263.4 AJA92584.1 - 0.011 15.3 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 SprT-like family DUF1062 PF06353.7 AJA92584.1 - 0.027 14.6 0.5 0.053 13.7 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) Nop PF01798.13 AJA92585.1 - 2.5e-49 166.4 1.8 4.8e-49 165.5 1.3 1.4 1 0 0 1 1 1 1 Putative snoRNA binding domain NOSIC PF08060.8 AJA92585.1 - 1.7e-20 72.5 0.1 5.3e-20 70.9 0.0 1.9 2 0 0 2 2 2 1 NOSIC (NUC001) domain DUF1129 PF06570.6 AJA92586.1 - 7.6 5.7 6.8 6.1 6.0 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) Usp PF00582.21 AJA92587.1 - 4.8e-26 91.6 0.0 5.6e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family DcpS_C PF11969.3 AJA92587.1 - 0.071 13.3 0.0 0.094 12.9 0.0 1.2 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding AA_kinase PF00696.23 AJA92588.1 - 1.9e-35 122.5 3.8 2.2e-35 122.3 2.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family Ribosomal_L32e PF01655.13 AJA92588.1 - 0.11 12.5 0.2 7.1 6.7 0.0 2.8 2 1 1 3 3 3 0 Ribosomal protein L32 ArgK PF03308.11 AJA92590.1 - 1.7e-73 246.6 6.1 2.1e-73 246.3 4.2 1.0 1 0 0 1 1 1 1 ArgK protein KAP_NTPase PF07693.9 AJA92590.1 - 3.9e-07 29.3 0.0 9.1e-07 28.1 0.0 1.6 1 1 0 1 1 1 1 KAP family P-loop domain cobW PF02492.14 AJA92590.1 - 6e-07 29.0 0.2 1.2e-06 28.1 0.1 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.12 AJA92590.1 - 2.5e-06 27.2 0.2 0.0019 17.8 0.0 2.3 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein DUF258 PF03193.11 AJA92590.1 - 0.00019 20.6 1.3 0.00064 18.9 0.1 2.3 2 1 1 3 3 3 1 Protein of unknown function, DUF258 AAA_10 PF12846.2 AJA92590.1 - 0.00071 19.1 0.5 0.0044 16.5 0.4 2.1 1 1 0 1 1 1 1 AAA-like domain AAA_17 PF13207.1 AJA92590.1 - 0.00077 20.2 0.7 0.0028 18.4 0.1 2.1 2 0 0 2 2 2 1 AAA domain IIGP PF05049.8 AJA92590.1 - 0.0011 17.8 5.8 0.024 13.4 0.1 2.4 3 0 0 3 3 2 2 Interferon-inducible GTPase (IIGP) AAA_16 PF13191.1 AJA92590.1 - 0.0011 18.9 0.2 0.0021 18.0 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 AJA92590.1 - 0.0012 18.9 1.3 0.015 15.4 0.0 2.7 2 1 0 2 2 2 1 AAA domain PRK PF00485.13 AJA92590.1 - 0.0014 18.2 0.8 0.0025 17.3 0.1 1.8 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family MMR_HSR1 PF01926.18 AJA92590.1 - 0.0015 18.5 2.1 0.0059 16.5 1.4 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase MobB PF03205.9 AJA92590.1 - 0.0015 18.2 2.5 0.008 15.8 0.1 2.8 3 1 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B GTP_EFTU PF00009.22 AJA92590.1 - 0.0016 17.8 0.9 1.2 8.5 0.1 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain NB-ARC PF00931.17 AJA92590.1 - 0.0018 17.1 2.0 0.054 12.3 0.1 2.2 2 0 0 2 2 2 1 NB-ARC domain Miro PF08477.8 AJA92590.1 - 0.005 17.3 0.9 0.22 12.0 0.0 2.7 1 1 1 2 2 2 1 Miro-like protein ABC_tran PF00005.22 AJA92590.1 - 0.0052 17.0 0.2 0.0052 17.0 0.2 2.2 2 0 0 2 2 2 1 ABC transporter AAA_18 PF13238.1 AJA92590.1 - 0.0059 16.9 1.8 0.019 15.2 0.1 2.4 2 1 0 2 2 2 1 AAA domain NACHT PF05729.7 AJA92590.1 - 0.0099 15.5 0.8 0.032 13.8 0.0 2.0 2 0 0 2 2 2 1 NACHT domain NTPase_1 PF03266.10 AJA92590.1 - 0.017 14.8 0.9 0.058 13.1 0.0 2.2 2 1 0 2 2 2 0 NTPase AAA_35 PF14516.1 AJA92590.1 - 0.018 13.6 2.2 0.082 11.5 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain DUF87 PF01935.12 AJA92590.1 - 0.026 14.3 3.9 2.1 8.0 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF87 APS_kinase PF01583.15 AJA92590.1 - 0.031 13.9 0.0 0.1 12.2 0.0 1.9 2 0 0 2 2 1 0 Adenylylsulphate kinase RNA_helicase PF00910.17 AJA92590.1 - 0.036 14.2 0.4 0.2 11.8 0.0 2.4 2 1 0 2 2 2 0 RNA helicase AAA_19 PF13245.1 AJA92590.1 - 0.043 13.5 0.7 0.11 12.2 0.1 2.0 2 0 0 2 2 2 0 Part of AAA domain Zeta_toxin PF06414.7 AJA92590.1 - 0.044 12.8 0.1 0.099 11.7 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin GBP PF02263.14 AJA92590.1 - 0.049 12.6 2.6 0.18 10.8 0.0 2.2 2 1 0 2 2 2 0 Guanylate-binding protein, N-terminal domain AAA_30 PF13604.1 AJA92590.1 - 0.05 13.1 1.0 0.09 12.3 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 AJA92590.1 - 0.051 13.0 0.3 0.12 11.8 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF1725 PF08333.6 AJA92590.1 - 0.052 12.8 0.1 0.16 11.2 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1725) LpxK PF02606.9 AJA92590.1 - 0.061 12.2 0.9 0.93 8.3 0.0 2.1 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase Arch_ATPase PF01637.13 AJA92590.1 - 0.13 11.9 0.1 0.13 11.9 0.0 2.6 2 1 0 2 2 2 0 Archaeal ATPase AAA_23 PF13476.1 AJA92590.1 - 0.53 10.5 16.4 1.3 9.3 0.1 2.5 2 1 0 2 2 2 0 AAA domain NfeD PF01957.13 AJA92591.1 - 0.46 10.6 6.5 0.53 10.4 4.5 1.1 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF4191 PF13829.1 AJA92591.1 - 0.83 8.7 3.6 0.85 8.6 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) IncA PF04156.9 AJA92591.1 - 1 8.9 10.8 1 8.9 7.5 1.0 1 0 0 1 1 1 0 IncA protein SdpI PF13630.1 AJA92591.1 - 1.3 8.7 13.7 1.9 8.2 9.5 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family PrgI PF12666.2 AJA92591.1 - 1.4 9.1 5.5 1.5 9.0 3.8 1.1 1 0 0 1 1 1 0 PrgI family protein DUF4013 PF13197.1 AJA92591.1 - 2 7.7 17.1 2.4 7.4 11.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) Tic20 PF09685.5 AJA92591.1 - 2.1 8.3 10.4 2.6 8.0 7.2 1.1 1 0 0 1 1 1 0 Tic20-like protein VIT1 PF01988.14 AJA92591.1 - 2.3 7.6 6.6 2.4 7.5 4.6 1.0 1 0 0 1 1 1 0 VIT family DUF2207 PF09972.4 AJA92591.1 - 3.5 6.1 9.9 3.8 5.9 6.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SUR7 PF06687.7 AJA92591.1 - 6 6.3 8.5 7.2 6.1 5.9 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF2273 PF10031.4 AJA92591.1 - 8.5 6.0 20.6 0.21 11.1 4.2 2.2 1 1 1 2 2 2 0 Small integral membrane protein (DUF2273) Guanylate_cyc PF00211.15 AJA92593.1 - 1.8e-15 56.7 0.0 2.6e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain UbiD PF01977.11 AJA92594.1 - 8.5e-102 340.6 0.0 9.7e-102 340.4 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Epimerase PF01370.16 AJA92595.1 - 9e-45 152.9 0.0 1.1e-44 152.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 AJA92595.1 - 2.2e-18 65.9 0.1 3.1e-18 65.4 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 AJA92595.1 - 1.6e-06 28.2 0.0 2.6e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_4 PF07993.7 AJA92595.1 - 9.5e-05 21.4 0.0 0.0017 17.2 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.10 AJA92595.1 - 0.00067 18.6 0.0 0.0025 16.7 0.0 1.8 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein adh_short PF00106.20 AJA92595.1 - 0.00097 19.0 0.0 0.0036 17.2 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase Epimerase_Csub PF13950.1 AJA92595.1 - 0.072 13.0 0.0 0.23 11.4 0.0 1.8 2 0 0 2 2 2 0 UDP-glucose 4-epimerase C-term subunit DUF3586 PF12131.3 AJA92595.1 - 0.16 12.0 0.1 0.33 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) Lipase_3 PF01764.20 AJA92596.1 - 0.14 11.7 0.1 0.25 10.9 0.1 1.5 1 1 0 1 1 1 0 Lipase (class 3) TP_methylase PF00590.15 AJA92597.1 - 6.7e-34 117.4 0.0 7.7e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Transglut_core2 PF13369.1 AJA92598.1 - 3.7e-41 140.1 0.0 9.8e-41 138.7 0.0 1.6 2 0 0 2 2 2 1 Transglutaminase-like superfamily TPR_9 PF13371.1 AJA92598.1 - 7.1e-13 48.2 0.0 1.2e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92598.1 - 7.8e-05 22.1 2.6 0.00013 21.5 0.4 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.23 AJA92598.1 - 0.00032 20.1 0.5 0.0017 17.8 0.3 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92598.1 - 0.00049 19.9 2.9 0.0016 18.2 0.2 2.7 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_2 PF07719.12 AJA92598.1 - 0.0034 17.1 0.2 0.011 15.6 0.2 1.9 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92598.1 - 0.0039 17.0 0.3 0.023 14.6 0.1 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92598.1 - 0.0052 16.4 0.1 0.013 15.1 0.1 1.7 1 0 0 1 1 1 1 TPR repeat DUF2451 PF10474.4 AJA92598.1 - 0.033 13.9 0.1 0.068 12.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) TPR_14 PF13428.1 AJA92598.1 - 0.043 14.4 0.0 0.11 13.1 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat Penicillinase_R PF03965.11 AJA92599.1 - 0.00091 19.3 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor Carboxyl_trans PF01039.17 AJA92600.1 - 4e-185 615.8 0.1 4.5e-185 615.7 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.6 AJA92600.1 - 1.9e-06 27.2 0.0 5.3e-06 25.8 0.0 1.7 2 0 0 2 2 2 1 Malonate decarboxylase gamma subunit (MdcE) Radical_SAM PF04055.16 AJA92601.1 - 1.5e-12 47.9 0.1 4e-12 46.6 0.1 1.8 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 AJA92601.1 - 2.3e-09 37.1 0.0 7.5e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 B12 binding domain DUF3791 PF12668.2 AJA92601.1 - 0.0059 16.1 0.6 0.017 14.6 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3791) CbiX PF01903.12 AJA92602.1 - 6.5e-32 109.7 0.0 3.8e-15 55.8 0.0 2.1 2 0 0 2 2 2 2 CbiX CbiK PF06180.6 AJA92602.1 - 4.2e-06 26.0 0.8 5.7e-06 25.6 0.5 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 AJA92602.1 - 5.6e-06 25.5 0.0 0.001 18.1 0.0 2.0 2 0 0 2 2 2 2 Ferrochelatase GTP_EFTU PF00009.22 AJA92603.1 - 4.7e-32 110.9 0.0 3.2e-31 108.2 0.0 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 AJA92603.1 - 1.4e-23 82.8 1.1 1.4e-22 79.6 0.2 2.5 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 AJA92603.1 - 2e-10 40.1 0.8 5.8e-10 38.6 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.18 AJA92603.1 - 3e-07 30.4 0.0 9.6e-07 28.7 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.20 AJA92603.1 - 1.2e-05 25.2 0.2 0.00036 20.5 0.0 2.7 2 0 0 2 2 2 1 Elongation factor Tu domain 2 ATP_bind_1 PF03029.12 AJA92603.1 - 0.00017 21.2 0.0 0.00086 18.9 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Miro PF08477.8 AJA92603.1 - 0.00023 21.6 0.0 0.0012 19.3 0.0 2.3 2 0 0 2 2 2 1 Miro-like protein Dynamin_N PF00350.18 AJA92603.1 - 0.00059 19.6 1.0 0.051 13.4 0.1 3.1 3 0 0 3 3 3 1 Dynamin family Ras PF00071.17 AJA92603.1 - 0.015 14.7 0.0 0.093 12.1 0.0 2.3 1 1 0 1 1 1 0 Ras family MobB PF03205.9 AJA92603.1 - 0.057 13.1 0.1 0.18 11.5 0.0 1.9 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PhoU PF01895.14 AJA92604.1 - 1.4e-27 95.9 13.4 8.8e-20 70.9 0.8 2.3 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 AJA92604.1 - 5.2e-08 32.4 0.3 1e-06 28.3 0.0 2.7 2 0 0 2 2 2 1 Antidote-toxin recognition MazE DUF1905 PF08922.6 AJA92604.1 - 0.056 13.0 0.0 0.16 11.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1905) HD_4 PF13328.1 AJA92605.1 - 1.4e-23 83.2 0.1 1.9e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 HD domain HD PF01966.17 AJA92605.1 - 0.00048 20.1 0.2 0.0013 18.7 0.1 1.7 1 1 0 1 1 1 1 HD domain NAD_binding_6 PF08030.7 AJA92605.1 - 0.011 15.6 1.5 0.014 15.2 1.1 1.2 1 0 0 1 1 1 0 Ferric reductase NAD binding domain DCA16 PF15349.1 AJA92605.1 - 0.057 12.7 0.0 0.086 12.1 0.0 1.3 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 2-ph_phosp PF04029.9 AJA92605.1 - 0.061 12.2 0.2 0.085 11.8 0.1 1.3 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase ILVD_EDD PF00920.16 AJA92606.1 - 2.8e-216 718.9 5.4 3.2e-216 718.7 3.7 1.0 1 0 0 1 1 1 1 Dehydratase family Ribosomal_L5_C PF00673.16 AJA92607.1 - 2.3e-23 81.7 0.0 4.6e-23 80.7 0.0 1.5 2 0 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 AJA92607.1 - 4.8e-10 39.0 0.1 8.8e-10 38.2 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_L21e PF01157.13 AJA92607.1 - 0.046 13.5 0.1 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein L21e Rad51 PF08423.6 AJA92608.1 - 1.1e-94 316.1 0.2 1.4e-94 315.8 0.2 1.1 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.1 AJA92608.1 - 5e-10 39.1 0.0 7.7e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain KaiC PF06745.8 AJA92608.1 - 8.2e-10 38.1 0.1 1.3e-09 37.4 0.1 1.3 1 0 0 1 1 1 1 KaiC RecA PF00154.16 AJA92608.1 - 1.3e-09 37.6 0.2 1.9e-09 37.0 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.1 AJA92608.1 - 7e-05 22.9 0.2 0.00027 21.0 0.1 2.0 2 0 0 2 2 1 1 Helix-hairpin-helix domain AAA_22 PF13401.1 AJA92608.1 - 0.0074 16.4 0.0 0.016 15.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.22 AJA92608.1 - 0.024 14.9 0.0 0.05 13.9 0.0 1.5 1 0 0 1 1 1 0 ABC transporter Arch_ATPase PF01637.13 AJA92608.1 - 0.025 14.2 0.1 1.6 8.3 0.0 2.5 2 1 1 3 3 3 0 Archaeal ATPase AAA_31 PF13614.1 AJA92608.1 - 0.04 13.8 0.0 0.082 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 AJA92608.1 - 0.044 13.4 0.0 0.075 12.6 0.0 1.3 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.17 AJA92608.1 - 0.07 13.3 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ABC2_membrane PF01061.19 AJA92609.1 - 4.2e-21 75.0 23.8 4.2e-21 75.0 16.5 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 AJA92609.1 - 4.4e-15 55.5 39.6 8.7e-15 54.5 19.8 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 AJA92609.1 - 3.1e-11 42.9 34.3 3.8e-11 42.6 23.8 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 AJA92609.1 - 0.03 13.6 34.2 0.46 9.7 23.7 2.2 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF3493 PF11998.3 AJA92609.1 - 0.25 11.2 0.0 0.25 11.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3493) Thioredox_DsbH PF03190.10 AJA92610.1 - 1e-74 249.6 0.1 2.2e-74 248.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.1 AJA92610.1 - 1.8e-13 50.2 0.0 3.6e-13 49.3 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.8 AJA92610.1 - 9e-08 31.6 7.3 0.00018 20.8 0.3 4.2 3 1 1 4 4 4 2 D-glucuronyl C5-epimerase C-terminus DUF1680 PF07944.7 AJA92610.1 - 9.1e-07 27.5 1.2 4.6e-05 21.9 0.2 2.8 2 1 1 3 3 3 1 Putative glycosyl hydrolase of unknown function (DUF1680) Thioredoxin_2 PF13098.1 AJA92610.1 - 0.00027 21.1 0.0 0.0007 19.7 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like domain Glyco_hydro_88 PF07470.8 AJA92610.1 - 0.00033 19.8 1.3 0.41 9.6 0.0 2.7 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 GlcNAc_2-epim PF07221.6 AJA92610.1 - 0.02 13.9 0.1 0.11 11.5 0.0 2.0 2 1 0 2 2 2 0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LANC_like PF05147.8 AJA92610.1 - 0.81 8.1 6.9 1.5 7.2 0.3 3.8 3 1 1 4 4 4 0 Lanthionine synthetase C-like protein DAO PF01266.19 AJA92611.1 - 1.3e-35 122.9 0.0 2.1e-35 122.2 0.0 1.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Mqo PF06039.10 AJA92611.1 - 3.7e-06 25.3 0.3 0.053 11.6 0.0 2.6 2 1 1 3 3 3 2 Malate:quinone oxidoreductase (Mqo) Sda PF08970.5 AJA92611.1 - 0.0016 17.9 0.0 0.0051 16.2 0.0 1.9 1 0 0 1 1 1 1 Sporulation inhibitor A FAD_binding_3 PF01494.14 AJA92611.1 - 0.0031 16.6 0.0 0.023 13.7 0.0 2.2 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.9 AJA92611.1 - 0.047 12.1 0.0 0.2 10.0 0.0 1.8 2 0 0 2 2 2 0 HI0933-like protein Trp_halogenase PF04820.9 AJA92611.1 - 0.087 11.4 0.6 0.41 9.2 0.4 1.9 1 1 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.7 AJA92611.1 - 0.15 10.9 0.0 9.2 5.0 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein DUF900 PF05990.7 AJA92613.1 - 1.6e-14 53.7 0.2 2.5e-14 53.1 0.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF726 PF05277.7 AJA92613.1 - 4.9e-09 35.5 0.0 7e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) Cutinase PF01083.17 AJA92613.1 - 7.3e-08 32.3 0.1 9.9e-08 31.9 0.1 1.2 1 0 0 1 1 1 1 Cutinase Lipase_3 PF01764.20 AJA92613.1 - 2.4e-07 30.4 0.1 4.1e-07 29.6 0.1 1.4 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.9 AJA92613.1 - 1.3e-05 24.6 3.0 2.5e-05 23.6 2.1 1.5 1 1 0 1 1 1 1 Putative serine esterase (DUF676) DUF2305 PF10230.4 AJA92613.1 - 0.00013 21.4 0.1 0.00018 21.0 0.1 1.3 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2305) Abhydrolase_5 PF12695.2 AJA92613.1 - 0.00017 21.3 0.0 0.00023 20.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.7 AJA92613.1 - 0.0014 18.2 0.0 0.0022 17.5 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase Lipase PF00151.14 AJA92613.1 - 0.0044 16.2 0.8 0.0086 15.3 0.2 1.6 1 1 1 2 2 2 1 Lipase DUF1749 PF08538.5 AJA92613.1 - 0.0065 15.3 0.1 0.012 14.4 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1749) LCAT PF02450.10 AJA92613.1 - 0.011 14.7 0.1 0.016 14.1 0.0 1.4 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase VirJ PF06057.6 AJA92613.1 - 0.071 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) DUF4295 PF14128.1 AJA92613.1 - 0.61 9.7 3.4 1.8 8.2 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4295) Myosin_N PF02736.14 AJA92614.1 - 0.43 10.2 4.3 1.1 8.9 0.2 3.4 4 0 0 4 4 4 0 Myosin N-terminal SH3-like domain GHMP_kinases_N PF00288.21 AJA92615.1 - 3.7e-18 65.3 2.2 6.4e-18 64.5 0.8 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 AJA92615.1 - 2.7e-12 46.7 0.0 6.8e-12 45.4 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal DUF3091 PF11291.3 AJA92615.1 - 0.023 14.6 2.1 0.023 14.6 1.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3091) DUF778 PF05608.7 AJA92615.1 - 0.14 12.1 0.8 1.5 8.7 0.6 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF778) HD_3 PF13023.1 AJA92616.1 - 6.9e-36 123.4 0.2 7.7e-36 123.3 0.1 1.0 1 0 0 1 1 1 1 HD domain HD PF01966.17 AJA92616.1 - 0.00012 22.0 0.0 0.0003 20.7 0.0 1.6 1 1 0 1 1 1 1 HD domain Cas_Cas4 PF01930.12 AJA92617.1 - 0.00024 21.0 0.3 0.00031 20.7 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function DUF83 DUF2067 PF09840.4 AJA92617.1 - 0.052 13.0 0.1 0.098 12.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) AAA PF00004.24 AJA92618.1 - 0.013 15.7 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 AJA92618.1 - 0.025 13.9 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AsnC_trans_reg PF01037.16 AJA92619.1 - 3.5e-07 29.8 0.6 4.1e-07 29.6 0.4 1.2 1 1 0 1 1 1 1 AsnC family BPL_N PF09825.4 AJA92620.1 - 0.099 11.4 0.1 0.18 10.5 0.1 1.3 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF3098 PF11297.3 AJA92621.1 - 0.87 9.3 3.2 0.37 10.5 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) ATP_bind_4 PF01902.12 AJA92622.1 - 6.9e-59 198.8 0.0 7.8e-59 198.6 0.0 1.0 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 AJA92622.1 - 0.0077 15.5 0.0 0.032 13.5 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 AJA92622.1 - 0.013 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase PAPS_reduct PF01507.14 AJA92622.1 - 0.065 13.0 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family DZR PF12773.2 AJA92623.1 - 0.0027 17.4 4.6 0.006 16.3 3.2 1.7 1 1 0 1 1 1 1 Double zinc ribbon UPF0547 PF10571.4 AJA92623.1 - 0.0072 15.9 1.3 0.013 15.1 0.9 1.5 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 AJA92623.1 - 0.045 13.2 4.3 0.65 9.5 1.6 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.6 AJA92623.1 - 3.7 7.1 5.4 13 5.4 0.1 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TrmB PF01978.14 AJA92625.1 - 0.0014 18.3 0.0 0.0027 17.3 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Glycos_trans_3N PF02885.12 AJA92625.1 - 0.048 13.2 0.1 0.075 12.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain Glycolipid_bind PF06475.6 AJA92625.1 - 0.14 11.3 0.0 0.19 10.8 0.0 1.3 1 1 0 1 1 1 0 Putative glycolipid-binding Asp_Glu_race PF01177.17 AJA92626.1 - 9.9e-23 81.1 0.0 1.4e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase DUF3884 PF13024.1 AJA92626.1 - 0.045 13.1 0.3 0.1 12.0 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) KH_1 PF00013.24 AJA92626.1 - 0.084 12.5 0.1 12 5.6 0.0 2.4 2 0 0 2 2 2 0 KH domain Pyr_redox PF00070.22 AJA92626.1 - 0.13 12.6 0.3 1.6 9.1 0.0 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase FTR1 PF03239.9 AJA92627.1 - 1.6e-18 66.7 19.2 2.1e-17 63.0 12.9 2.4 1 1 0 1 1 1 1 Iron permease FTR1 family GATase PF00117.23 AJA92628.1 - 5.6e-23 81.3 0.0 6.3e-23 81.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 AJA92628.1 - 3.4e-11 42.9 0.1 2.9e-09 36.6 0.1 2.1 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 AJA92628.1 - 0.0047 16.5 0.0 0.063 12.8 0.0 2.0 2 0 0 2 2 2 1 SNO glutamine amidotransferase family DUF3473 PF11959.3 AJA92629.1 - 5.1e-30 103.6 0.0 7.2e-30 103.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.16 AJA92629.1 - 2.3e-12 46.5 0.0 4.9e-11 42.3 0.0 2.2 2 0 0 2 2 2 1 Polysaccharide deacetylase DapB_N PF01113.15 AJA92630.1 - 3.4e-08 33.4 0.0 9.4e-08 32.0 0.0 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.19 AJA92630.1 - 4.5e-07 29.9 0.0 8.7e-06 25.7 0.0 2.5 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 AJA92630.1 - 0.00076 19.7 0.0 0.0015 18.7 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.15 AJA92630.1 - 0.0059 16.0 0.2 0.12 11.8 0.0 2.5 1 1 1 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NAD_binding_3 PF03447.11 AJA92630.1 - 0.0061 16.9 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Spc7 PF08317.6 AJA92631.1 - 0.0019 16.9 8.6 0.0021 16.8 5.9 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Apolipoprotein PF01442.13 AJA92631.1 - 0.0097 15.4 3.1 0.011 15.2 2.2 1.0 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4618 PF15397.1 AJA92631.1 - 0.033 13.5 4.7 0.041 13.2 3.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Ferritin-like PF12902.2 AJA92631.1 - 0.054 13.0 0.6 0.06 12.9 0.4 1.0 1 0 0 1 1 1 0 Ferritin-like EzrA PF06160.7 AJA92631.1 - 0.083 11.0 5.4 0.087 10.9 3.7 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA ATG16 PF08614.6 AJA92631.1 - 0.092 12.5 6.2 0.17 11.7 4.3 1.5 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF848 PF05852.6 AJA92631.1 - 0.095 12.5 4.9 0.1 12.4 3.4 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) IncA PF04156.9 AJA92631.1 - 0.15 11.6 5.3 0.24 11.0 3.7 1.3 1 1 0 1 1 1 0 IncA protein Iron_permease PF04120.7 AJA92631.1 - 0.17 11.4 2.8 0.17 11.4 1.9 1.1 1 0 0 1 1 1 0 Low affinity iron permease Fib_alpha PF08702.5 AJA92631.1 - 0.17 11.9 4.9 0.42 10.7 3.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Prefoldin_2 PF01920.15 AJA92631.1 - 0.21 11.3 12.8 0.95 9.2 3.9 2.0 1 1 1 2 2 2 0 Prefoldin subunit Pfg27 PF09216.5 AJA92631.1 - 0.3 10.6 3.1 0.33 10.5 2.1 1.0 1 0 0 1 1 1 0 Pfg27 TBPIP PF07106.8 AJA92631.1 - 0.37 10.3 8.6 0.41 10.1 6.0 1.1 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) TMF_DNA_bd PF12329.3 AJA92631.1 - 0.38 10.5 11.5 0.44 10.3 6.9 1.7 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.10 AJA92631.1 - 0.58 9.6 8.6 3.6 7.1 2.0 2.1 2 0 0 2 2 2 0 Septum formation initiator DUF3735 PF12537.3 AJA92631.1 - 0.58 10.2 2.4 2.7 8.1 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3735) DUF342 PF03961.8 AJA92631.1 - 0.73 8.1 9.0 0.76 8.1 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) DUF812 PF05667.6 AJA92631.1 - 0.89 7.9 7.2 1.6 7.1 5.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Seryl_tRNA_N PF02403.17 AJA92631.1 - 0.9 9.5 8.9 3.5 7.7 6.1 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Atg14 PF10186.4 AJA92631.1 - 1 8.2 6.3 5.6 5.8 4.3 1.8 1 1 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 SlyX PF04102.7 AJA92631.1 - 1.2 9.5 3.7 4 7.8 2.6 1.8 1 1 0 1 1 1 0 SlyX DUF4201 PF13870.1 AJA92631.1 - 1.8 7.9 11.1 6.5 6.1 7.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) DivIVA PF05103.8 AJA92631.1 - 3.4 7.7 7.8 1.5 8.8 0.4 2.0 1 1 0 2 2 2 0 DivIVA protein DASH_Spc34 PF08657.5 AJA92631.1 - 4.2 6.9 9.3 2 8.0 0.2 2.0 1 1 1 2 2 2 0 DASH complex subunit Spc34 Med28 PF11594.3 AJA92631.1 - 4.8 7.4 8.7 33 4.7 6.0 1.9 1 1 0 1 1 1 0 Mediator complex subunit 28 SAB PF04382.8 AJA92631.1 - 5.3 6.8 6.9 6.4 6.5 2.5 2.5 1 1 1 2 2 2 0 SAB domain AAA_13 PF13166.1 AJA92631.1 - 5.5 5.3 8.7 6.8 5.0 1.8 1.7 1 1 1 2 2 2 0 AAA domain Med9 PF07544.8 AJA92631.1 - 7.4 6.3 9.5 10 5.9 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 SecE PF00584.15 AJA92632.1 - 0.0064 16.0 0.0 0.0073 15.8 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Frag1 PF10277.4 AJA92632.1 - 0.1 12.0 0.1 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family Met_10 PF02475.11 AJA92634.1 - 1.3e-59 201.1 0.0 1.6e-59 200.8 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 AJA92634.1 - 6.2e-08 32.6 0.0 1e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 AJA92634.1 - 5.2e-06 26.1 0.2 9.6e-06 25.2 0.1 1.5 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.8 AJA92634.1 - 1.4e-05 24.3 0.1 2.6e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.2 AJA92634.1 - 1.7e-05 25.3 0.0 2.8e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 AJA92634.1 - 0.00026 20.6 0.1 0.00056 19.5 0.0 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 AJA92634.1 - 0.0003 20.2 0.1 0.00053 19.4 0.0 1.4 2 0 0 2 2 2 1 Conserved hypothetical protein 95 TRM PF02005.11 AJA92634.1 - 0.00052 19.0 0.1 0.00066 18.7 0.0 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase MTS PF05175.9 AJA92634.1 - 0.0011 18.3 0.1 0.0025 17.2 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 AJA92634.1 - 0.027 14.9 0.0 0.055 13.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain A2M_N PF01835.14 AJA92635.1 - 0.0017 18.5 0.1 0.0032 17.6 0.0 1.4 1 0 0 1 1 1 1 MG2 domain DNA_PPF PF02916.10 AJA92635.1 - 1 9.4 4.5 0.71 9.9 0.1 2.5 3 0 0 3 3 3 0 DNA polymerase processivity factor Big_3_4 PF13754.1 AJA92635.1 - 9.3 6.6 7.8 1.5 9.2 0.8 2.8 4 0 0 4 4 4 0 Bacterial Ig-like domain (group 3) ADH_N PF08240.7 AJA92636.1 - 6.5e-31 106.3 0.6 1.4e-30 105.2 0.4 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 AJA92636.1 - 3.3e-16 59.0 0.4 5.4e-16 58.3 0.3 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_31 PF13847.1 AJA92636.1 - 0.00017 21.2 0.2 0.00034 20.2 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N_2 PF13602.1 AJA92636.1 - 0.00031 21.6 0.0 0.00053 20.8 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.16 AJA92636.1 - 0.00035 20.1 1.2 0.00082 18.9 0.8 1.6 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.14 AJA92636.1 - 0.0015 17.7 0.6 0.0031 16.7 0.3 1.6 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Methyltransf_18 PF12847.2 AJA92636.1 - 0.0023 18.5 0.1 0.0066 17.0 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain ELFV_dehydrog PF00208.16 AJA92636.1 - 0.0028 17.2 1.7 0.016 14.8 0.2 2.1 1 1 1 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_IDH_MocA PF01408.17 AJA92636.1 - 0.0029 18.1 0.3 0.058 13.9 0.1 2.4 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.13 AJA92636.1 - 0.01 15.8 0.1 0.02 14.9 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain ApbA PF02558.11 AJA92636.1 - 0.016 14.6 0.1 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 AJA92636.1 - 0.025 14.4 0.1 0.053 13.3 0.1 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding PF02629.14 AJA92636.1 - 0.03 14.8 5.3 0.085 13.3 1.8 3.0 2 1 0 2 2 2 0 CoA binding domain NAD_binding_7 PF13241.1 AJA92636.1 - 0.042 14.1 0.1 0.1 12.8 0.1 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding DOT1 PF08123.8 AJA92636.1 - 0.055 12.7 2.5 0.3 10.3 1.8 1.9 1 1 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_11 PF08241.7 AJA92636.1 - 0.055 13.9 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain S1-like PF14444.1 AJA92636.1 - 0.11 12.2 2.2 0.67 9.7 0.1 2.9 2 2 1 3 3 3 0 S1-like zf-IS66 PF13005.2 AJA92636.1 - 9.3 6.3 6.8 0.29 11.1 0.2 1.9 2 0 0 2 2 1 0 zinc-finger binding domain of transposase IS66 UbiA PF01040.13 AJA92637.1 - 2.2e-31 109.0 23.7 2.8e-31 108.6 16.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF373 PF04123.8 AJA92637.1 - 5.4 5.9 16.0 0.16 10.9 1.7 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF373) DUF897 PF05982.7 AJA92638.1 - 8.1e-93 310.7 22.7 9.4e-93 310.5 15.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF897) WSS_VP PF12175.3 AJA92638.1 - 0.031 13.3 0.1 0.054 12.5 0.1 1.4 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP SMC_N PF02463.14 AJA92639.1 - 1.8e-15 56.7 25.0 3e-09 36.4 0.4 2.9 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 AJA92639.1 - 1.7e-09 38.3 82.3 2.5e-05 24.7 43.1 4.1 1 1 1 2 2 1 1 AAA domain AAA_29 PF13555.1 AJA92639.1 - 2.4e-09 36.5 0.1 4.7e-09 35.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.1 AJA92639.1 - 6.7e-09 35.2 49.7 2.2e-06 27.0 16.4 2.4 1 1 1 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.1 AJA92639.1 - 6.6e-08 32.3 0.0 1.4e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.1 AJA92639.1 - 1.4e-06 28.5 31.5 0.00015 21.7 5.2 3.7 1 1 0 2 2 2 2 AAA domain AAA_13 PF13166.1 AJA92639.1 - 0.00049 18.7 60.4 0.0046 15.4 16.0 4.1 2 1 2 4 4 4 3 AAA domain DUF258 PF03193.11 AJA92639.1 - 0.002 17.3 0.5 0.0063 15.7 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Snapin_Pallidin PF14712.1 AJA92639.1 - 0.0064 16.7 6.7 0.0064 16.7 4.7 5.9 4 2 1 5 5 4 1 Snapin/Pallidin DUF641 PF04859.7 AJA92639.1 - 0.0076 15.9 5.1 0.0076 15.9 3.5 4.1 1 1 4 6 6 6 1 Plant protein of unknown function (DUF641) ABC_tran PF00005.22 AJA92639.1 - 0.0086 16.3 0.0 0.0086 16.3 0.0 4.8 2 1 0 2 2 1 1 ABC transporter AAA_16 PF13191.1 AJA92639.1 - 0.72 9.8 0.0 0.72 9.8 0.0 3.0 2 2 0 3 3 3 0 AAA ATPase domain MMR_HSR1 PF01926.18 AJA92639.1 - 1.5 8.8 8.1 0.092 12.7 0.5 2.9 2 1 1 3 3 3 0 50S ribosome-binding GTPase Adenine_deam_C PF13382.1 AJA92641.1 - 4.8e-47 159.2 0.0 5.2e-46 155.9 0.0 2.1 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 AJA92641.1 - 1.6e-15 57.6 0.0 2.6e-13 50.3 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 AJA92641.1 - 2.2e-10 40.1 0.4 1.6e-09 37.4 0.1 2.4 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 AJA92641.1 - 0.012 15.6 0.0 0.082 12.9 0.0 1.9 2 0 0 2 2 2 0 Amidohydrolase IF-2B PF01008.12 AJA92641.1 - 0.036 13.0 0.1 0.078 11.9 0.1 1.5 1 0 0 1 1 1 0 Initiation factor 2 subunit family DUF2099 PF09872.4 AJA92641.1 - 0.06 12.3 1.9 0.78 8.7 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2099) Amidohydro_3 PF07969.6 AJA92641.1 - 0.72 9.0 1.6 4.8 6.3 1.2 1.9 2 0 0 2 2 2 0 Amidohydrolase family DUF1059 PF06348.6 AJA92642.1 - 1.4e-07 31.2 0.1 1.6e-07 31.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HMG-CoA_red PF00368.13 AJA92643.1 - 1.6e-81 273.8 6.5 1.9e-81 273.6 4.5 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Lipase_GDSL_2 PF13472.1 AJA92644.1 - 1.9e-10 41.1 0.0 3.4e-10 40.3 0.0 1.5 2 0 0 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.17 AJA92644.1 - 1.2e-08 35.0 0.6 2.1e-08 34.2 0.4 1.4 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Glyco_hydro_42 PF02449.10 AJA92645.1 - 0.0016 17.6 0.0 0.0027 16.8 0.0 1.4 1 0 0 1 1 1 1 Beta-galactosidase Thiolase_C PF02803.13 AJA92646.1 - 2e-12 46.6 0.1 3.3e-12 45.9 0.1 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 AJA92646.1 - 2.1e-05 23.6 0.0 3.6e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 AJA92646.1 - 0.027 13.9 0.0 0.054 12.9 0.0 1.6 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 AJA92646.1 - 0.049 13.4 1.5 2.9 7.7 0.0 2.9 2 1 1 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain 3HCDH_N PF02737.13 AJA92647.1 - 1e-65 220.7 1.9 1e-65 220.7 1.3 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 AJA92647.1 - 2.6e-37 127.1 0.2 1.3e-25 89.5 0.0 3.3 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 AJA92647.1 - 4.3e-09 36.3 0.4 7.9e-09 35.4 0.3 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 AJA92647.1 - 1.6e-06 28.0 0.1 3.8e-06 26.8 0.1 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 AJA92647.1 - 7.8e-05 23.0 0.3 0.00034 20.9 0.2 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 AJA92647.1 - 0.0098 15.2 0.2 0.019 14.3 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4078 PF13300.1 AJA92647.1 - 0.011 15.7 0.2 0.022 14.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4078) IlvN PF07991.7 AJA92647.1 - 1.1 8.5 4.5 43 3.4 3.1 2.3 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain DUF643 PF04867.7 AJA92647.1 - 2.7 8.3 7.5 0.6 10.5 0.6 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF643) zf-CHY PF05495.7 AJA92648.1 - 0.015 15.3 5.0 0.015 15.3 3.4 2.1 2 0 0 2 2 2 0 CHY zinc finger zf-nanos PF05741.8 AJA92648.1 - 0.084 12.8 3.0 1.4 8.9 0.0 2.8 2 1 0 2 2 2 0 Nanos RNA binding domain zf-AD PF07776.10 AJA92648.1 - 3.3 7.7 7.1 8.6 6.4 1.2 2.5 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) zf-UBR PF02207.15 AJA92648.1 - 3.5 7.4 10.7 0.62 9.8 0.4 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) CofC PF01983.11 AJA92649.1 - 9.7e-26 90.0 5.5 1.2e-25 89.8 3.8 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 AJA92649.1 - 1.2e-09 38.4 0.0 1.5e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 AJA92649.1 - 0.00016 21.3 0.5 0.00025 20.7 0.3 1.3 1 0 0 1 1 1 1 Cytidylyltransferase Saw1 PF11561.3 AJA92649.1 - 0.043 13.1 8.8 0.037 13.4 3.5 2.0 1 1 1 2 2 2 0 Single strand annealing-weakened 1 GatB_Yqey PF02637.13 AJA92649.1 - 0.097 12.3 1.8 0.18 11.5 1.3 1.4 1 0 0 1 1 1 0 GatB domain Pantoate_transf PF02548.10 AJA92650.1 - 4.6e-98 327.4 2.0 5.2e-98 327.3 1.4 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.1 AJA92650.1 - 3.2e-05 23.2 2.5 0.0006 19.1 0.3 1.7 1 1 1 2 2 2 2 Phosphoenolpyruvate phosphomutase ORF6N PF10543.4 AJA92650.1 - 0.0066 16.4 0.6 0.018 15.0 0.2 1.9 2 0 0 2 2 2 1 ORF6N domain Peptidase_M41 PF01434.13 AJA92650.1 - 0.23 10.9 2.7 3 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase family M41 ATP-grasp_2 PF08442.5 AJA92652.1 - 7.6e-47 159.3 0.6 1.6e-46 158.2 0.4 1.5 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.14 AJA92652.1 - 5.3e-17 61.8 0.5 1.4e-16 60.4 0.4 1.7 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.1 AJA92652.1 - 1.8e-14 53.4 0.3 4.9e-14 52.0 0.1 1.8 2 1 0 2 2 2 1 ATP-grasp domain ATP-grasp_4 PF13535.1 AJA92652.1 - 1.1e-06 28.5 0.0 2.3e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 AJA92652.1 - 1.3e-06 27.8 0.0 2.4e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.17 AJA92652.1 - 0.00054 19.3 0.0 0.0013 18.0 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain DUF362 PF04015.7 AJA92652.1 - 0.11 11.9 0.2 0.61 9.5 0.0 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF362) Dus PF01207.12 AJA92653.1 - 3.9e-76 255.8 0.0 4.4e-76 255.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Oxidored_FMN PF00724.15 AJA92653.1 - 2.8e-05 23.2 0.0 7.1e-05 21.9 0.0 1.8 2 0 0 2 2 2 1 NADH:flavin oxidoreductase / NADH oxidase family NanE PF04131.9 AJA92653.1 - 0.0048 15.8 0.1 0.032 13.2 0.0 2.1 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase SOR_SNZ PF01680.12 AJA92653.1 - 0.024 14.2 0.0 0.86 9.1 0.0 2.3 1 1 1 2 2 2 0 SOR/SNZ family His_biosynth PF00977.16 AJA92653.1 - 0.062 12.5 0.0 0.17 11.1 0.0 1.7 2 0 0 2 2 2 0 Histidine biosynthesis protein TMP-TENI PF02581.12 AJA92653.1 - 0.069 12.2 0.0 0.14 11.2 0.0 1.6 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI Prefoldin PF02996.12 AJA92654.1 - 3.9e-20 71.6 10.2 1.3e-19 69.9 7.1 1.7 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 AJA92654.1 - 0.0018 17.9 14.7 0.0051 16.5 2.3 2.1 2 0 0 2 2 2 1 Prefoldin subunit DASH_Dad2 PF08654.5 AJA92654.1 - 0.0042 17.0 0.7 0.0042 17.0 0.5 2.1 2 0 0 2 2 2 1 DASH complex subunit Dad2 PhoQ_Sensor PF08918.5 AJA92654.1 - 0.01 15.3 1.1 0.017 14.6 0.1 1.7 1 1 1 2 2 2 0 PhoQ Sensor Laminin_II PF06009.7 AJA92654.1 - 0.014 15.1 8.3 0.26 11.0 0.5 2.2 2 0 0 2 2 2 0 Laminin Domain II Med28 PF11594.3 AJA92654.1 - 0.022 14.9 6.0 0.07 13.3 0.8 2.1 2 0 0 2 2 2 0 Mediator complex subunit 28 DUF2299 PF10061.4 AJA92654.1 - 0.033 13.6 2.0 0.46 9.9 0.1 2.6 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2299) LMP PF04778.7 AJA92654.1 - 0.034 13.9 4.1 0.069 12.9 0.2 2.1 2 0 0 2 2 2 0 LMP repeated region DUF2363 PF10155.4 AJA92654.1 - 0.041 13.8 0.5 0.078 12.9 0.1 1.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2363) 5_3_exonuc PF01367.15 AJA92654.1 - 0.045 13.9 2.7 0.053 13.7 0.2 2.0 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Uds1 PF15456.1 AJA92654.1 - 0.05 13.5 3.1 0.099 12.6 2.2 1.6 1 1 0 1 1 1 0 Up-regulated During Septation BBP1_C PF15272.1 AJA92654.1 - 0.055 13.0 8.3 0.17 11.4 5.8 1.7 1 1 0 1 1 1 0 Spindle pole body component BBP1, C-terminal Reo_sigmaC PF04582.7 AJA92654.1 - 0.077 12.1 3.4 0.52 9.4 0.3 2.0 2 0 0 2 2 2 0 Reovirus sigma C capsid protein Ax_dynein_light PF10211.4 AJA92654.1 - 0.12 12.2 14.3 0.67 9.7 2.2 2.0 2 0 0 2 2 2 0 Axonemal dynein light chain Sec20 PF03908.8 AJA92654.1 - 0.14 11.8 9.2 1.9 8.2 2.1 2.4 2 0 0 2 2 2 0 Sec20 NuA4 PF09340.5 AJA92654.1 - 0.16 11.6 3.9 0.29 10.7 0.0 2.4 2 1 0 2 2 2 0 Histone acetyltransferase subunit NuA4 TMF_TATA_bd PF12325.3 AJA92654.1 - 0.18 11.5 10.7 1.5 8.6 1.1 2.1 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding 4HB_MCP_1 PF12729.2 AJA92654.1 - 0.23 10.8 6.8 0.47 9.7 0.7 2.2 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction IL15 PF02372.10 AJA92654.1 - 0.32 10.7 3.7 1.7 8.3 0.1 2.1 2 0 0 2 2 2 0 Interleukin 15 RasGAP_C PF03836.10 AJA92654.1 - 0.45 10.1 8.1 0.12 12.0 0.2 2.1 2 0 0 2 2 2 0 RasGAP C-terminus Spc7 PF08317.6 AJA92654.1 - 0.46 9.0 15.0 0.057 12.0 3.4 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1664 PF07889.7 AJA92654.1 - 0.47 10.2 5.9 2.8 7.7 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF972 PF06156.8 AJA92654.1 - 0.56 10.5 8.7 1.3 9.4 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF972) FlaC_arch PF05377.6 AJA92654.1 - 0.57 10.1 10.1 0.12 12.2 1.2 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Uso1_p115_C PF04871.8 AJA92654.1 - 0.61 10.0 8.0 0.23 11.3 0.5 2.1 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Striatin PF08232.7 AJA92654.1 - 0.96 9.7 9.2 1.4 9.2 2.2 2.1 2 0 0 2 2 2 0 Striatin family WXG100 PF06013.7 AJA92654.1 - 1.1 9.3 13.7 1.4 8.9 2.2 2.4 2 0 0 2 2 2 0 Proteins of 100 residues with WXG CENP-F_leu_zip PF10473.4 AJA92654.1 - 1.1 9.0 14.4 0.27 11.0 2.8 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MCPsignal PF00015.16 AJA92654.1 - 1.2 8.6 9.5 3.1 7.2 1.2 2.1 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain BSD PF03909.12 AJA92654.1 - 1.5 8.6 6.9 0.31 10.8 0.9 2.3 2 0 0 2 2 2 0 BSD domain DUF2664 PF10867.3 AJA92654.1 - 1.5 9.4 8.8 4.5 7.9 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2664) Seryl_tRNA_N PF02403.17 AJA92654.1 - 1.7 8.6 13.0 0.56 10.2 1.9 2.3 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF948 PF06103.6 AJA92654.1 - 1.9 8.4 7.4 3.3 7.6 0.6 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Fib_alpha PF08702.5 AJA92654.1 - 2.1 8.4 12.4 2.9 8.0 1.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family eIF3_N PF09440.5 AJA92654.1 - 2.5 8.2 8.5 6.6 6.9 1.0 2.2 2 0 0 2 2 2 0 eIF3 subunit 6 N terminal domain DUF4164 PF13747.1 AJA92654.1 - 2.5 8.2 8.0 1.5 8.9 1.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF812 PF05667.6 AJA92654.1 - 2.7 6.3 14.0 6.1 5.2 9.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF607 PF04678.8 AJA92654.1 - 3.5 7.5 6.8 0.7 9.7 0.8 1.9 1 1 1 2 2 2 0 Protein of unknown function, DUF607 Tropomyosin_1 PF12718.2 AJA92654.1 - 4.8 7.0 14.4 1.8 8.3 2.6 2.1 2 0 0 2 2 2 0 Tropomyosin like GrpE PF01025.14 AJA92654.1 - 4.8 6.7 8.7 3.4 7.2 1.4 2.1 2 0 0 2 2 2 0 GrpE PilO PF04350.8 AJA92654.1 - 6 6.7 12.8 0.55 10.1 3.6 2.1 2 0 0 2 2 2 0 Pilus assembly protein, PilO Cluap1 PF10234.4 AJA92654.1 - 6.7 5.8 11.9 5.2 6.1 1.5 2.0 2 0 0 2 2 2 0 Clusterin-associated protein-1 DUF724 PF05266.9 AJA92654.1 - 7.6 6.1 14.8 0.48 10.0 2.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF745 PF05335.8 AJA92654.1 - 9 5.7 14.3 7.4 6.0 2.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF745) ADH_zinc_N PF00107.21 AJA92655.1 - 5.4e-29 100.3 0.0 9.6e-29 99.5 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.7 AJA92655.1 - 3e-21 75.2 0.1 4.9e-21 74.5 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 AJA92655.1 - 4.1e-17 63.2 0.1 6.8e-17 62.5 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.5 AJA92655.1 - 0.15 12.0 0.7 0.34 10.9 0.2 1.8 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RGP PF03214.8 AJA92657.1 - 8.5e-21 74.0 0.2 1.2e-20 73.5 0.2 1.1 1 0 0 1 1 1 1 Reversibly glycosylated polypeptide Glycos_transf_2 PF00535.21 AJA92657.1 - 0.017 14.8 1.0 0.36 10.4 0.1 2.4 2 1 0 2 2 2 0 Glycosyl transferase family 2 Collagen PF01391.13 AJA92659.1 - 4.2e-43 144.7 162.7 4.2e-10 39.0 19.7 5.3 1 1 3 4 4 4 4 Collagen triple helix repeat (20 copies) DsbD PF02683.10 AJA92660.1 - 3.9e-54 183.4 16.8 3.3e-43 147.7 7.2 2.1 2 0 0 2 2 2 2 Cytochrome C biogenesis protein transmembrane region AhpC-TSA PF00578.16 AJA92660.1 - 3.4e-11 42.9 0.0 5.6e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92660.1 - 4.4e-10 39.2 0.0 7.4e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.1 AJA92660.1 - 1e-07 31.9 0.0 2.1e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like DUF2910 PF11139.3 AJA92660.1 - 0.0016 17.6 10.7 0.0025 16.9 5.9 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2910) DUF2182 PF09948.4 AJA92660.1 - 0.014 15.3 2.9 0.044 13.6 2.0 1.8 1 1 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) Thioredoxin PF00085.15 AJA92660.1 - 0.04 13.6 0.0 0.076 12.7 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin DUF1625 PF07787.7 AJA92660.1 - 0.046 12.9 5.7 0.19 10.9 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1625) Thioredoxin_2 PF13098.1 AJA92660.1 - 0.051 13.7 0.0 0.097 12.8 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain CPSase_L_D2 PF02786.12 AJA92661.1 - 1.2e-101 338.3 0.1 2.4e-74 249.1 0.1 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 AJA92661.1 - 3.5e-40 137.7 0.0 2.9e-19 69.5 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain CPSase_L_D3 PF02787.14 AJA92661.1 - 1e-39 135.1 0.1 2.5e-39 133.8 0.1 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPSase_L_chain PF00289.17 AJA92661.1 - 3.1e-34 117.3 0.1 1.1e-17 64.0 0.0 3.1 3 0 0 3 3 3 2 Carbamoyl-phosphate synthase L chain, N-terminal domain ATPgrasp_Ter PF15632.1 AJA92661.1 - 5.6e-21 74.6 0.2 2e-09 36.6 0.0 3.9 3 2 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.17 AJA92661.1 - 2.2e-19 69.4 0.3 6.8e-09 35.3 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.8 AJA92661.1 - 3.5e-14 52.6 3.2 3e-07 30.0 0.0 2.7 3 0 0 3 3 3 2 D-ala D-ala ligase C-terminus MGS PF02142.17 AJA92661.1 - 4.9e-14 52.0 0.1 4.4e-13 48.9 0.0 2.8 3 0 0 3 3 3 1 MGS-like domain GARS_A PF01071.14 AJA92661.1 - 2.7e-10 40.1 0.5 0.00016 21.3 0.0 2.6 2 1 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.9 AJA92661.1 - 1.6e-07 31.3 0.5 0.006 16.4 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_2 PF08442.5 AJA92661.1 - 0.0081 15.5 0.1 0.049 13.0 0.1 2.4 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_5 PF13549.1 AJA92661.1 - 0.043 13.0 0.0 0.37 9.9 0.0 2.3 2 0 0 2 2 2 0 ATP-grasp domain GARS_A PF01071.14 AJA92662.1 - 4.8e-77 257.9 0.3 6.6e-77 257.4 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 AJA92662.1 - 6.7e-33 113.1 0.1 1.3e-32 112.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 AJA92662.1 - 2.7e-32 110.7 0.0 5.3e-32 109.8 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 AJA92662.1 - 1.4e-11 44.4 0.0 2.6e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 AJA92662.1 - 8.9e-08 31.6 0.0 1.8e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 AJA92662.1 - 4.9e-07 29.7 0.0 7.7e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.6 AJA92662.1 - 1.7e-06 27.6 0.1 4.7e-06 26.2 0.1 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain CPSase_L_D2 PF02786.12 AJA92662.1 - 6.7e-06 25.5 0.1 1.2e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.1 AJA92662.1 - 0.00015 20.6 0.0 0.0019 17.0 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_2 PF08442.5 AJA92662.1 - 0.00018 20.9 0.0 0.0003 20.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 AJA92662.1 - 0.0003 20.2 0.0 0.00054 19.3 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.1 AJA92662.1 - 0.03 13.4 0.1 0.069 12.2 0.0 1.6 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp MS_channel PF00924.13 AJA92663.1 - 2.6e-29 102.0 0.1 5e-29 101.1 0.1 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF161 PF02588.10 AJA92663.1 - 1.6 9.0 9.4 2.1 8.7 4.9 2.2 2 1 0 2 2 2 0 Uncharacterized BCR, YitT family COG1284 Radical_SAM PF04055.16 AJA92664.1 - 3e-15 56.7 0.2 3e-15 56.7 0.1 2.7 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 AJA92664.1 - 1.3e-07 31.6 0.0 1.3e-07 31.6 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 AJA92664.1 - 5e-07 29.9 0.0 1.2e-06 28.6 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DegT_DnrJ_EryC1 PF01041.12 AJA92665.1 - 2.6e-93 312.9 0.0 2.9e-93 312.8 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 AJA92665.1 - 7.8e-10 38.3 0.0 1.2e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 AJA92665.1 - 7.6e-07 28.3 0.0 1.5e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II SLA_LP_auto_ag PF05889.8 AJA92665.1 - 4.4e-05 22.1 0.2 5.2e-05 21.8 0.1 1.1 1 0 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Cys_Met_Meta_PP PF01053.15 AJA92665.1 - 0.00019 19.8 0.0 0.0003 19.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Surfac_D-trimer PF09006.6 AJA92665.1 - 0.022 14.5 0.0 0.46 10.2 0.0 2.5 2 0 0 2 2 2 0 Lung surfactant protein D coiled-coil trimerisation Toprim_N PF08275.6 AJA92666.1 - 0.028 14.3 0.8 0.14 12.0 0.6 2.1 1 1 0 1 1 1 0 DNA primase catalytic core, N-terminal domain Abhydrolase_7 PF12715.2 AJA92667.1 - 1.3e-15 57.2 0.0 1.3e-14 53.9 0.0 2.0 1 1 0 1 1 1 1 Abhydrolase family Abhydrolase_5 PF12695.2 AJA92667.1 - 0.00072 19.3 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 AJA92667.1 - 0.081 12.7 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 Putative lysophospholipase Fer4 PF00037.22 AJA92669.1 - 7.3e-08 31.7 15.8 0.00018 20.9 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 AJA92669.1 - 3.4e-07 30.4 5.6 6.6e-07 29.4 3.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 AJA92669.1 - 1.4e-06 28.5 4.9 3e-06 27.5 3.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 AJA92669.1 - 4.5e-06 26.3 3.8 8.3e-06 25.5 2.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 AJA92669.1 - 3.1e-05 23.7 4.5 4.9e-05 23.1 3.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 AJA92669.1 - 0.0002 21.2 3.3 0.00049 20.0 2.3 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 AJA92669.1 - 0.00028 21.2 1.3 0.56 10.6 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 AJA92669.1 - 0.0026 17.5 11.2 0.02 14.7 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 AJA92669.1 - 0.0047 16.7 15.3 0.02 14.7 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 AJA92669.1 - 0.0072 16.5 6.0 0.39 11.1 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 AJA92669.1 - 0.29 11.9 7.2 5 7.9 5.1 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 AJA92669.1 - 0.31 11.4 5.1 11 6.4 0.1 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 AJA92669.1 - 0.45 11.2 14.8 1.6 9.5 1.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain HMGL-like PF00682.14 AJA92670.1 - 2.6e-76 256.4 0.1 6.1e-76 255.2 0.1 1.6 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 AJA92670.1 - 9.9e-28 96.5 1.7 1.7e-27 95.8 1.2 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Glyco_hydro_97 PF10566.4 AJA92670.1 - 0.013 14.6 0.0 0.035 13.2 0.0 1.7 2 0 0 2 2 2 0 Glycoside hydrolase 97 AP_endonuc_2 PF01261.19 AJA92670.1 - 0.062 12.5 0.0 0.14 11.4 0.0 1.6 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Trypan_PARP PF05887.6 AJA92671.1 - 0.00029 20.6 10.3 0.00045 20.0 7.1 1.3 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) A2M_N PF01835.14 AJA92671.1 - 0.051 13.8 0.1 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 MG2 domain Cuticle_1 PF08140.6 AJA92671.1 - 0.11 12.3 0.8 9.1 6.1 0.0 3.4 3 0 0 3 3 3 0 Crustacean cuticle protein repeat RtcB PF01139.12 AJA92673.1 - 1.1e-153 512.1 0.2 1.2e-153 512.0 0.2 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB DUF3492 PF11997.3 AJA92673.1 - 0.0065 16.0 0.1 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3492) FIBP PF05427.6 AJA92673.1 - 0.11 11.6 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Acidic fibroblast growth factor binding (FIBP) DUF552 PF04472.7 AJA92674.1 - 2.3e-15 56.2 0.4 2.6e-15 56.0 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF552) H_kinase_N PF12282.3 AJA92674.1 - 0.0039 16.8 0.0 0.0058 16.2 0.0 1.2 1 0 0 1 1 1 1 Signal transduction histidine kinase Herpes_IE68 PF02479.11 AJA92674.1 - 0.056 12.6 0.0 0.078 12.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus immediate early protein DUF4546 PF15079.1 AJA92674.1 - 0.093 11.8 0.3 0.1 11.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4546) Proteasome PF00227.21 AJA92675.1 - 2.7e-52 176.8 0.9 3.4e-52 176.4 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 AJA92675.1 - 3.8e-12 45.3 0.9 2.2e-11 42.8 0.1 2.5 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Cupin_2 PF07883.6 AJA92676.1 - 1.8e-06 27.3 0.0 1.4e-05 24.4 0.0 2.0 1 1 0 1 1 1 1 Cupin domain Auxin_BP PF02041.11 AJA92676.1 - 3.9e-06 26.3 0.0 4.5e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Auxin binding protein Cupin_1 PF00190.17 AJA92676.1 - 0.00017 21.0 0.0 0.00023 20.6 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_8 PF13621.1 AJA92676.1 - 0.012 15.1 0.0 0.2 11.1 0.0 2.0 1 1 1 2 2 2 0 Cupin-like domain DUF1498 PF07385.7 AJA92676.1 - 0.055 12.5 0.1 0.098 11.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1498) DUF1358 PF07096.6 AJA92676.1 - 0.068 12.8 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) SIMPL PF04402.9 AJA92677.1 - 3.8e-46 157.5 2.1 4.9e-46 157.2 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) OmpA PF00691.15 AJA92677.1 - 0.03 14.7 0.9 0.73 10.2 0.0 2.5 1 1 1 2 2 2 0 OmpA family PUD PF03714.9 AJA92677.1 - 0.13 12.3 0.6 0.96 9.6 0.1 2.4 2 1 0 2 2 2 0 Bacterial pullanase-associated domain Glycos_transf_3 PF00591.16 AJA92678.1 - 7.3e-79 264.7 0.2 9.7e-79 264.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 AJA92678.1 - 4.6e-07 29.3 0.0 1.4e-06 27.7 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Phosphodiest PF01663.17 AJA92678.1 - 0.044 13.0 0.1 0.089 12.1 0.0 1.4 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase Snf7 PF03357.16 AJA92678.1 - 1.4 8.2 5.9 0.52 9.6 1.3 2.2 2 0 0 2 2 2 0 Snf7 ABC_tran PF00005.22 AJA92680.1 - 4.2e-31 108.0 0.0 9.5e-31 106.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 AJA92680.1 - 3.3e-13 50.2 6.3 3.3e-10 40.3 0.0 2.8 2 1 1 3 3 3 2 AAA domain AAA_15 PF13175.1 AJA92680.1 - 7.6e-07 28.5 11.8 8.6e-05 21.7 0.0 3.1 3 0 0 3 3 3 2 AAA ATPase domain DUF4162 PF13732.1 AJA92680.1 - 7.8e-05 23.1 2.0 7.8e-05 23.1 1.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_29 PF13555.1 AJA92680.1 - 0.00067 19.1 0.2 0.0016 17.9 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 AJA92680.1 - 0.0014 17.9 2.0 0.0014 17.9 0.1 1.9 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 AJA92680.1 - 0.018 15.4 11.2 0.081 13.2 7.8 2.0 1 1 0 1 1 1 0 AAA domain DUF258 PF03193.11 AJA92680.1 - 0.038 13.1 0.0 0.064 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SbcCD_C PF13558.1 AJA92680.1 - 0.09 12.6 0.0 0.26 11.2 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Helicase_C_2 PF13307.1 AJA92681.1 - 9.2e-21 74.5 0.5 1.4e-19 70.6 0.0 2.4 2 0 0 2 2 2 1 Helicase C-terminal domain ResIII PF04851.10 AJA92681.1 - 9.9e-12 45.0 2.5 1.8e-11 44.2 0.2 2.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.10 AJA92681.1 - 6.5e-06 25.6 7.0 0.00011 21.7 1.8 2.4 2 0 0 2 2 2 2 DEAD_2 DEAD PF00270.24 AJA92681.1 - 8.6e-06 25.3 0.2 0.046 13.2 0.0 3.6 4 0 0 4 4 4 2 DEAD/DEAH box helicase AAA PF00004.24 AJA92681.1 - 0.00095 19.3 0.1 0.0076 16.4 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 AJA92681.1 - 0.1 12.7 0.8 12 6.0 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.1 AJA92681.1 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain ACT_4 PF13291.1 AJA92682.1 - 0.041 14.2 0.6 0.12 12.6 0.2 2.0 2 0 0 2 2 2 0 ACT domain DUF4366 PF14283.1 AJA92682.1 - 0.052 12.9 0.0 0.088 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) DUF3149 PF11346.3 AJA92682.1 - 9.2 5.9 9.9 1.3 8.6 1.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) MTS PF05175.9 AJA92683.1 - 2.2e-11 43.4 0.0 3e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 AJA92683.1 - 3.9e-08 33.0 2.3 7.4e-08 32.1 1.6 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92683.1 - 1.1e-07 31.7 0.0 2.1e-07 30.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 AJA92683.1 - 1.6e-06 28.1 0.0 2.4e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 AJA92683.1 - 3.8e-06 27.3 0.0 6.4e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 AJA92683.1 - 8.7e-06 26.0 0.2 1.7e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92683.1 - 4.1e-05 24.1 0.1 7.4e-05 23.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.6 AJA92683.1 - 4.7e-05 22.2 0.0 5.4e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_12 PF08242.7 AJA92683.1 - 0.0002 21.7 0.2 0.00039 20.8 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 AJA92683.1 - 0.00036 19.5 0.0 0.00049 19.0 0.0 1.1 1 0 0 1 1 1 1 DREV methyltransferase RrnaAD PF00398.15 AJA92683.1 - 0.0021 17.1 0.0 0.0036 16.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 AJA92683.1 - 0.0023 17.5 0.0 0.003 17.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.1 AJA92683.1 - 0.0031 17.1 0.0 0.0045 16.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 AJA92683.1 - 0.004 16.3 0.1 0.0058 15.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.14 AJA92683.1 - 0.021 14.7 0.1 0.031 14.2 0.1 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase AdoMet_MTase PF07757.8 AJA92683.1 - 0.086 12.9 0.1 0.34 11.0 0.0 1.9 2 0 0 2 2 2 0 Predicted AdoMet-dependent methyltransferase dUTPase_2 PF08761.6 AJA92684.1 - 1.1e-19 71.1 6.6 2.8e-15 56.7 0.4 2.0 1 1 1 2 2 2 2 dUTPase PRA-PH PF01503.12 AJA92684.1 - 0.008 16.4 0.0 0.0097 16.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase DUF550 PF04447.7 AJA92684.1 - 0.087 12.4 1.9 0.34 10.5 1.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF550) Epimerase_2 PF02350.14 AJA92685.1 - 1.7e-05 23.7 0.0 3e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Metallophos_2 PF12850.2 AJA92686.1 - 7.7e-25 87.5 0.5 9.2e-25 87.2 0.4 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 AJA92686.1 - 2e-06 27.3 3.1 3.2e-05 23.4 2.1 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Fucose_iso_N1 PF07881.7 AJA92686.1 - 0.032 13.7 0.1 0.064 12.7 0.1 1.6 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain Radical_SAM PF04055.16 AJA92687.1 - 3e-17 63.2 0.0 5.2e-17 62.5 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.15 AJA92687.1 - 1.4e-14 53.7 1.4 1.8e-14 53.3 0.1 1.8 2 0 0 2 2 2 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 AJA92687.1 - 4.5e-05 23.1 0.2 0.00012 21.7 0.1 1.7 1 0 0 1 1 1 1 TRAM domain DUF1059 PF06348.6 AJA92688.1 - 2.3e-10 40.1 0.0 2.7e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Alba PF01918.16 AJA92689.1 - 5.4e-07 29.1 0.2 7.7e-07 28.6 0.1 1.3 1 0 0 1 1 1 1 Alba Trypan_PARP PF05887.6 AJA92689.1 - 0.00012 21.9 16.3 0.00015 21.5 11.3 1.1 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) DUF2659 PF10858.3 AJA92689.1 - 0.053 12.9 0.2 0.4 10.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2659) PAT1 PF09770.4 AJA92689.1 - 0.16 10.1 7.0 0.16 10.1 4.9 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 DUF4106 PF13388.1 AJA92689.1 - 0.23 10.4 8.5 0.3 9.9 5.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) DUF3597 PF12200.3 AJA92689.1 - 0.3 11.4 3.9 0.69 10.3 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3597) DUF4366 PF14283.1 AJA92689.1 - 1 8.7 4.3 1.4 8.2 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) RR_TM4-6 PF06459.7 AJA92689.1 - 2.3 8.0 6.2 2.9 7.7 4.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF2360 PF10152.4 AJA92689.1 - 2.9 8.1 9.7 4.2 7.6 6.7 1.3 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein (DUF2360) Neisseria_TspB PF05616.8 AJA92689.1 - 5.7 5.1 13.3 7.9 4.7 9.2 1.2 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein eIF3_subunit PF08597.5 AJA92689.1 - 8.2 5.8 8.6 13 5.3 6.0 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit PT PF04886.7 AJA92689.1 - 10 5.5 28.6 2.7 7.3 17.0 2.2 2 1 0 2 2 2 0 PT repeat ROK PF00480.15 AJA92690.1 - 1e-47 162.2 4.3 1.3e-47 161.9 3.0 1.1 1 0 0 1 1 1 1 ROK family Hydant_A_N PF05378.8 AJA92690.1 - 0.00028 20.4 0.1 0.00044 19.8 0.1 1.3 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region BcrAD_BadFG PF01869.15 AJA92690.1 - 0.0016 17.7 0.1 0.0056 16.0 0.1 1.9 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family Glucokinase PF02685.11 AJA92690.1 - 0.0078 15.0 1.0 0.03 13.0 0.7 1.8 1 1 0 1 1 1 1 Glucokinase Peptidase_M24 PF00557.19 AJA92691.1 - 1e-35 123.1 0.6 1.3e-35 122.9 0.4 1.2 1 1 0 1 1 1 1 Metallopeptidase family M24 DUF2070 PF09843.4 AJA92692.1 - 2.1e-39 134.8 0.2 3.1e-39 134.2 0.1 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Hexapep PF00132.19 AJA92693.1 - 2.5e-26 89.9 17.5 1.5e-09 36.8 0.1 3.6 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 AJA92693.1 - 1.9e-14 52.8 11.2 8.6e-09 34.8 2.5 4.8 4 1 1 5 5 5 4 Hexapeptide repeat of succinyl-transferase UPF0051 PF01458.12 AJA92694.1 - 9.6e-66 221.5 1.7 1.8e-65 220.6 1.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) SNase PF00565.12 AJA92696.1 - 2.2e-05 24.6 0.0 3.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue P-II PF00543.17 AJA92698.1 - 0.06 13.8 0.1 0.14 12.6 0.0 1.6 1 1 0 1 1 1 0 Nitrogen regulatory protein P-II Peptidase_S8 PF00082.17 AJA92699.1 - 4.7e-63 212.9 0.1 6.7e-63 212.4 0.1 1.2 1 0 0 1 1 1 1 Subtilase family PA PF02225.17 AJA92699.1 - 3.2e-09 36.3 0.0 5.6e-08 32.4 0.0 2.5 2 0 0 2 2 2 1 PA domain Ham1p_like PF01725.11 AJA92700.1 - 3.4e-46 157.0 0.0 3.8e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Ham1 family AA_kinase PF00696.23 AJA92701.1 - 7.8e-32 110.7 1.2 9.6e-32 110.4 0.9 1.1 1 0 0 1 1 1 1 Amino acid kinase family Citrate_synt PF00285.16 AJA92702.1 - 7e-134 446.0 0.0 7.8e-134 445.8 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase DUF2811 PF10929.3 AJA92702.1 - 0.13 12.2 0.1 0.28 11.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2811) GTP_cyclohydroI PF01227.17 AJA92703.1 - 2.2e-65 219.2 0.1 2.5e-65 219.1 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.1 AJA92703.1 - 0.00089 19.1 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 QueF-like protein PDEase_I PF00233.14 AJA92703.1 - 0.034 13.8 0.1 0.084 12.6 0.0 1.7 1 1 1 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase Fe-ADH_2 PF13685.1 AJA92704.1 - 2.1e-69 233.6 0.6 2.8e-69 233.1 0.4 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 AJA92704.1 - 7.9e-24 83.9 0.2 1.6e-23 82.9 0.2 1.5 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 AJA92704.1 - 4.8e-07 28.9 0.3 7e-06 25.1 0.2 2.5 1 1 0 1 1 1 1 3-dehydroquinate synthase PASTA PF03793.14 AJA92704.1 - 0.0069 16.0 0.1 0.027 14.1 0.0 2.0 1 1 1 2 2 2 1 PASTA domain Radical_SAM PF04055.16 AJA92705.1 - 7e-20 71.8 0.0 1.5e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Wyosine_form PF08608.7 AJA92705.1 - 1.3e-18 66.8 0.0 4.6e-18 65.0 0.1 2.0 2 0 0 2 2 2 1 Wyosine base formation Fer4_14 PF13394.1 AJA92705.1 - 0.00076 19.5 0.1 0.0068 16.4 0.1 2.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 AJA92705.1 - 0.012 15.7 0.1 0.14 12.2 0.1 2.4 1 1 0 1 1 1 0 4Fe-4S single cluster domain AAT PF03417.11 AJA92705.1 - 0.073 12.5 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase SAS4 PF15460.1 AJA92705.1 - 0.076 12.8 1.2 0.18 11.7 0.3 2.1 1 1 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 UPF0104 PF03706.8 AJA92706.1 - 3.3e-34 118.4 22.2 4.2e-34 118.1 15.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Sdh_cyt PF01127.17 AJA92707.1 - 1.5e-10 40.9 1.6 2.3e-10 40.3 1.1 1.4 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit tRNA-synt_1 PF00133.17 AJA92708.1 - 2.6e-62 210.7 3.1 4.1e-61 206.7 2.2 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 AJA92708.1 - 8.4e-25 87.2 0.3 2.7e-12 46.0 0.1 2.8 2 0 0 2 2 2 2 tRNA synthetases class I (M) Anticodon_1 PF08264.8 AJA92708.1 - 6.6e-24 84.3 1.2 1.5e-23 83.2 0.8 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 AJA92708.1 - 1.1e-12 47.6 0.0 2.8e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 AJA92708.1 - 1.3e-10 40.8 6.3 2.9e-07 29.9 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain DeoC PF01791.4 AJA92710.1 - 1.9e-47 161.5 0.0 2.3e-47 161.2 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 AJA92710.1 - 0.014 14.6 0.0 0.032 13.4 0.0 1.6 1 1 0 1 1 1 0 Phosphoenolpyruvate phosphomutase His_biosynth PF00977.16 AJA92710.1 - 0.053 12.7 0.0 0.12 11.5 0.0 1.6 1 0 0 1 1 1 0 Histidine biosynthesis protein YjgF_endoribonc PF14588.1 AJA92711.1 - 2.4e-33 115.1 0.0 2.7e-33 114.9 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.16 AJA92711.1 - 6.1e-18 64.7 0.0 1e-17 64.0 0.0 1.3 1 1 0 1 1 1 1 Endoribonuclease L-PSP BON PF04972.12 AJA92711.1 - 0.085 12.6 0.0 0.83 9.4 0.0 2.5 2 1 1 3 3 3 0 BON domain Oxidored_q1 PF00361.15 AJA92712.1 - 5.6e-56 189.7 18.4 1.8e-51 174.9 12.5 3.9 3 2 1 4 4 4 2 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 AJA92712.1 - 1.6e-10 40.3 2.2 1.6e-10 40.3 1.5 2.3 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1_C PF01010.14 AJA92712.1 - 0.00014 21.4 0.2 0.1 12.0 0.0 2.7 2 1 1 3 3 3 2 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q2 PF00420.19 AJA92712.1 - 0.59 9.7 17.6 0.25 10.9 4.7 4.2 3 1 0 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HhH-GPD PF00730.20 AJA92713.1 - 1.7e-24 86.2 0.1 2.3e-24 85.7 0.1 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 AJA92713.1 - 5.6e-09 35.2 0.1 2.1e-08 33.4 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif DUF2400 PF09674.5 AJA92713.1 - 0.0011 18.6 0.1 0.005 16.5 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2400) HHH_5 PF14520.1 AJA92713.1 - 0.0081 16.3 0.4 0.073 13.2 0.3 2.3 1 1 0 1 1 1 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.4 AJA92713.1 - 0.093 12.9 2.8 0.17 12.1 2.0 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III KH_1 PF00013.24 AJA92714.1 - 1.7e-13 49.9 13.1 5.4e-08 32.3 3.2 2.3 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 AJA92714.1 - 5.2e-07 29.1 9.5 9.9e-05 21.9 1.6 2.4 2 0 0 2 2 2 2 KH domain KH_2 PF07650.12 AJA92714.1 - 0.1 12.1 5.9 0.15 11.6 0.3 2.4 2 0 0 2 2 2 0 KH domain DUF3842 PF12953.2 AJA92714.1 - 0.12 12.5 0.3 0.36 10.9 0.0 1.9 2 1 1 3 3 3 0 Domain of unknown function (DUF3842) KH_5 PF13184.1 AJA92714.1 - 0.84 9.4 3.6 0.99 9.2 0.4 2.3 2 0 0 2 2 2 0 NusA-like KH domain KH_4 PF13083.1 AJA92714.1 - 2.2 7.9 4.3 3.5 7.3 0.4 2.6 2 1 0 2 2 2 0 KH domain Pribosyltran PF00156.22 AJA92715.1 - 1.4e-09 37.7 0.0 2.4e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_3 PF15610.1 AJA92715.1 - 1.9e-05 23.6 0.2 3e-05 23.0 0.2 1.2 1 0 0 1 1 1 1 PRTase ComF-like PRTase_2 PF15609.1 AJA92715.1 - 0.0003 20.1 0.1 0.00045 19.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase UPRTase PF14681.1 AJA92715.1 - 0.0068 15.6 0.1 0.012 14.8 0.1 1.5 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase Ribosomal_S26e PF01283.14 AJA92716.1 - 2.7e-31 108.1 2.8 2.9e-31 108.0 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e DUF3279 PF11682.3 AJA92716.1 - 0.016 14.7 1.2 0.059 12.9 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3279) DUF2387 PF09526.5 AJA92716.1 - 0.43 10.5 1.9 1.5 8.8 0.1 2.0 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) ADH_zinc_N PF00107.21 AJA92717.1 - 3e-32 110.9 0.1 4.3e-32 110.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.7 AJA92717.1 - 9.2e-32 109.0 0.5 1.4e-31 108.4 0.3 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 AJA92717.1 - 2.5e-10 41.3 0.0 4.1e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Urocanase PF01175.13 AJA92717.1 - 0.0028 15.7 0.0 0.0041 15.2 0.0 1.2 1 0 0 1 1 1 1 Urocanase Methyltransf_18 PF12847.2 AJA92717.1 - 0.02 15.4 0.0 0.032 14.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 AJA92717.1 - 0.022 14.1 0.1 0.038 13.3 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase small domain NAD_binding_2 PF03446.10 AJA92717.1 - 0.053 13.3 0.0 0.094 12.5 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 AJA92717.1 - 0.066 12.8 0.1 0.099 12.2 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_16 PF10294.4 AJA92717.1 - 0.084 12.3 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 Putative methyltransferase CoA_binding PF02629.14 AJA92717.1 - 0.11 13.0 2.2 6.1 7.4 0.2 3.6 2 1 1 3 3 3 0 CoA binding domain Methyltransf_11 PF08241.7 AJA92717.1 - 0.12 12.8 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain VirK PF06903.7 AJA92718.1 - 0.033 13.9 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 VirK protein Yopt PF09467.5 AJA92719.1 - 0.0078 16.0 0.1 0.023 14.5 0.0 1.8 1 0 0 1 1 1 1 Hypothetical protein Yopt ATP-grasp_5 PF13549.1 AJA92720.1 - 1.8e-78 262.8 0.5 3.1e-78 261.9 0.3 1.4 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 AJA92720.1 - 1.4e-52 176.9 0.6 3e-52 175.9 0.4 1.6 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 AJA92720.1 - 1.3e-23 83.3 0.3 6.4e-23 81.1 0.1 2.3 2 1 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 AJA92720.1 - 1.4e-07 31.9 0.7 1.4e-07 31.9 0.5 2.6 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.5 AJA92720.1 - 1.5e-06 27.7 2.0 3.5e-06 26.5 1.4 1.6 1 0 0 1 1 1 1 ATP-grasp domain Dak1_2 PF13684.1 AJA92720.1 - 0.0013 17.7 1.1 0.002 17.1 0.0 1.8 2 0 0 2 2 2 1 Dihydroxyacetone kinase family ATP-grasp_4 PF13535.1 AJA92720.1 - 0.0014 18.3 0.0 0.0036 17.0 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain Bromodomain PF00439.20 AJA92720.1 - 0.049 13.5 0.1 0.2 11.5 0.0 2.1 1 1 0 1 1 1 0 Bromodomain BLUF PF04940.7 AJA92720.1 - 0.1 12.3 0.3 0.31 10.7 0.0 1.9 2 0 0 2 2 2 0 Sensors of blue-light using FAD TINF2_N PF14973.1 AJA92720.1 - 0.13 12.3 0.2 0.64 10.1 0.1 2.2 2 0 0 2 2 2 0 TERF1-interacting nuclear factor 2 N-terminus Aconitase_C PF00694.14 AJA92721.1 - 7.8e-39 132.7 0.0 1.2e-38 132.1 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 AJA92721.1 - 0.0084 15.5 0.0 0.18 11.1 0.0 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Synaptobrevin PF00957.16 AJA92721.1 - 0.24 11.0 2.3 0.33 10.5 0.2 1.9 2 0 0 2 2 2 0 Synaptobrevin Hydrolase PF00702.21 AJA92722.1 - 4.2e-09 37.1 0.3 1.2e-08 35.6 0.2 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 AJA92722.1 - 1.5e-08 35.0 0.1 1.9e-08 34.7 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 AJA92722.1 - 1.7e-07 31.0 0.4 3e-05 23.7 0.1 2.5 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 AJA92722.1 - 9.8e-07 29.1 0.0 1.7e-06 28.3 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.8 AJA92722.1 - 0.00096 18.5 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Rpr2 PF04032.11 AJA92723.1 - 0.0011 18.8 0.2 0.0019 17.9 0.0 1.6 2 0 0 2 2 2 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain TF_Zn_Ribbon PF08271.7 AJA92723.1 - 0.0016 17.7 0.1 0.26 10.6 0.0 2.5 2 0 0 2 2 2 2 TFIIB zinc-binding TFIIS_C PF01096.13 AJA92723.1 - 0.049 13.2 0.7 5.1 6.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF1178 PF06676.6 AJA92723.1 - 0.15 12.2 1.4 2.6 8.2 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1178) Lipase_GDSL_2 PF13472.1 AJA92724.1 - 2.5e-09 37.5 0.0 4.5e-09 36.6 0.0 1.5 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family FtsX PF02687.16 AJA92725.1 - 0.041 13.6 5.1 0.49 10.1 0.1 2.1 2 0 0 2 2 2 0 FtsX-like permease family DNA_repr_REX1B PF14966.1 AJA92726.1 - 0.017 15.5 0.8 0.022 15.1 0.6 1.3 1 1 0 1 1 1 0 DNA repair REX1-B Dak2 PF02734.12 AJA92726.1 - 0.079 12.6 0.0 0.084 12.5 0.0 1.1 1 0 0 1 1 1 0 DAK2 domain Synaptobrevin PF00957.16 AJA92726.1 - 0.16 11.6 0.7 0.43 10.2 0.2 1.8 2 0 0 2 2 2 0 Synaptobrevin Alba PF01918.16 AJA92727.1 - 0.058 12.9 0.1 0.1 12.2 0.0 1.5 2 0 0 2 2 2 0 Alba QueC PF06508.8 AJA92728.1 - 2.6e-09 36.7 0.7 3.1e-08 33.1 0.1 2.5 2 1 1 3 3 3 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 AJA92728.1 - 1.2e-08 34.1 0.1 3.3e-08 32.7 0.0 1.7 2 0 0 2 2 2 1 NAD synthase Asn_synthase PF00733.16 AJA92728.1 - 1.4e-08 34.5 0.1 2.5e-08 33.7 0.1 1.3 1 1 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.11 AJA92728.1 - 1.8e-08 33.3 0.2 1.5e-05 23.7 0.1 2.2 2 0 0 2 2 2 2 tRNA methyl transferase ATP_bind_3 PF01171.15 AJA92728.1 - 2.4e-05 23.8 0.3 0.0012 18.3 0.2 2.2 1 1 0 1 1 1 1 PP-loop family ThiI PF02568.9 AJA92728.1 - 0.014 14.8 0.1 0.055 12.9 0.1 2.1 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) Arginosuc_synth PF00764.14 AJA92728.1 - 0.021 13.8 0.1 0.038 13.0 0.1 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase Asparaginase PF00710.15 AJA92729.1 - 2e-78 263.4 0.0 2.4e-78 263.1 0.0 1.0 1 0 0 1 1 1 1 Asparaginase Thi4 PF01946.12 AJA92730.1 - 5.4e-65 218.6 0.1 6.3e-65 218.4 0.0 1.0 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.19 AJA92730.1 - 5.6e-13 48.5 0.3 4.5e-06 25.7 0.0 3.0 3 0 0 3 3 3 2 FAD binding domain FAD_oxidored PF12831.2 AJA92730.1 - 8.5e-09 34.9 0.0 1.5e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.19 AJA92730.1 - 5.1e-08 32.2 0.2 4.4e-05 22.5 0.1 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 AJA92730.1 - 6.4e-08 32.5 0.0 1.3e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 AJA92730.1 - 1.3e-06 28.4 0.1 2.4e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 AJA92730.1 - 2.8e-06 26.0 0.0 4.1e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.14 AJA92730.1 - 3.5e-06 26.3 0.0 5.4e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.7 AJA92730.1 - 0.0002 20.4 0.2 0.0055 15.6 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.1 AJA92730.1 - 0.00045 20.3 0.2 0.00077 19.5 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 AJA92730.1 - 0.0012 17.7 0.1 0.0018 17.1 0.1 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.9 AJA92730.1 - 0.015 13.9 0.0 1.6 7.2 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase GDI PF00996.13 AJA92730.1 - 0.021 13.1 0.0 0.031 12.5 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor TrkA_N PF02254.13 AJA92730.1 - 0.027 14.4 0.1 0.057 13.4 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_9 PF13454.1 AJA92730.1 - 0.034 13.9 0.1 0.077 12.7 0.1 1.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding Pyr_redox PF00070.22 AJA92730.1 - 0.055 13.8 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF4366 PF14283.1 AJA92731.1 - 0.021 14.2 0.4 0.036 13.4 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) Podoplanin PF05808.6 AJA92731.1 - 0.047 13.2 1.6 0.073 12.6 1.1 1.2 1 0 0 1 1 1 0 Podoplanin Glyco_hydro_63 PF03200.11 AJA92731.1 - 0.099 10.4 1.2 0.12 10.1 0.9 1.0 1 0 0 1 1 1 0 Mannosyl oligosaccharide glucosidase PMP22_Claudin PF00822.15 AJA92731.1 - 0.16 11.5 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family DUF2839 PF10999.3 AJA92731.1 - 0.19 11.7 0.8 0.72 9.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2839) DUF2052 PF09747.4 AJA92731.1 - 1.3 8.8 9.0 2.1 8.2 6.2 1.3 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Ribosomal_L39 PF00832.15 AJA92732.1 - 4.7e-19 67.5 7.1 5.5e-19 67.3 4.9 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein PhosphMutase PF10143.4 AJA92733.1 - 2.7e-45 154.0 0.0 4.1e-45 153.5 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 AJA92733.1 - 4.8e-32 111.3 0.9 6.3e-32 110.9 0.6 1.1 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 AJA92733.1 - 0.00085 18.7 0.0 0.0059 15.9 0.0 2.1 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Rad51 PF08423.6 AJA92734.1 - 4.1e-27 94.7 0.2 1.2e-26 93.1 0.1 1.7 1 1 0 1 1 1 1 Rad51 KaiC PF06745.8 AJA92734.1 - 2.9e-11 42.9 1.7 2.2e-10 40.0 1.2 2.1 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 AJA92734.1 - 1.3e-06 27.9 0.0 2e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 AJA92734.1 - 1.8e-05 23.9 0.0 2.3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_14 PF13173.1 AJA92734.1 - 0.00015 21.6 2.6 0.0002 21.2 0.6 2.1 1 1 1 2 2 2 1 AAA domain Zot PF05707.7 AJA92734.1 - 0.00026 20.5 0.1 0.00035 20.0 0.1 1.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_22 PF13401.1 AJA92734.1 - 0.0011 19.1 0.1 0.0024 18.0 0.1 1.6 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 AJA92734.1 - 0.0019 17.6 0.3 0.059 12.7 0.1 2.5 2 1 0 2 2 2 1 IstB-like ATP binding protein PhoH PF02562.11 AJA92734.1 - 0.0062 15.7 0.0 0.016 14.4 0.0 1.7 2 0 0 2 2 2 1 PhoH-like protein AAA PF00004.24 AJA92734.1 - 0.01 16.0 0.3 0.019 15.1 0.2 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 AJA92734.1 - 0.023 14.3 1.0 0.054 13.1 0.7 1.6 1 1 0 1 1 1 0 Archaeal ATPase AAA_18 PF13238.1 AJA92734.1 - 0.048 13.9 0.9 0.11 12.8 0.6 1.7 1 1 0 1 1 1 0 AAA domain AAA_31 PF13614.1 AJA92734.1 - 0.061 13.2 0.3 0.094 12.6 0.2 1.4 1 1 0 1 1 1 0 AAA domain DnaB_C PF03796.10 AJA92734.1 - 0.1 11.4 0.9 0.34 9.7 0.0 1.9 1 1 1 2 2 2 0 DnaB-like helicase C terminal domain TBP PF00352.16 AJA92735.1 - 2e-62 206.5 0.1 9.7e-31 104.9 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 AJA92735.1 - 1.6e-06 28.0 0.0 0.0016 18.4 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF373 PF04123.8 AJA92735.1 - 0.047 12.7 0.0 0.061 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) AAA_5 PF07728.9 AJA92736.1 - 3.7e-25 88.2 0.1 5.1e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 AJA92736.1 - 4.8e-13 48.8 0.0 6.8e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 AJA92736.1 - 2.2e-08 34.3 0.0 3.6e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 AJA92736.1 - 1.1e-07 31.8 0.0 2.2e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain MCM PF00493.18 AJA92736.1 - 1.1e-05 24.4 0.0 1.6e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 MCM2/3/5 family AAA_16 PF13191.1 AJA92736.1 - 1.4e-05 25.1 0.1 2.2e-05 24.5 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain Arch_ATPase PF01637.13 AJA92736.1 - 1.7e-05 24.6 0.3 5.3e-05 23.0 0.1 1.8 2 0 0 2 2 2 1 Archaeal ATPase Sigma54_activat PF00158.21 AJA92736.1 - 3.3e-05 23.4 0.1 6.3e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_17 PF13207.1 AJA92736.1 - 3.9e-05 24.4 0.1 9.7e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.7 AJA92736.1 - 6.1e-05 22.1 0.1 0.00084 18.4 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 AJA92736.1 - 0.00013 22.1 0.1 0.00027 21.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain CbbQ_C PF08406.5 AJA92736.1 - 0.00019 21.3 0.1 0.00042 20.2 0.0 1.6 2 0 0 2 2 1 1 CbbQ/NirQ/NorQ C-terminal AAA_18 PF13238.1 AJA92736.1 - 0.0004 20.6 0.1 0.00092 19.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.1 AJA92736.1 - 0.00043 20.3 0.0 0.001 19.1 0.0 1.6 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_33 PF13671.1 AJA92736.1 - 0.00053 19.8 0.1 0.001 18.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 AJA92736.1 - 0.00059 19.5 0.1 0.0013 18.4 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Rad17 PF03215.10 AJA92736.1 - 0.0011 17.7 0.0 0.0014 17.4 0.0 1.2 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein KAP_NTPase PF07693.9 AJA92736.1 - 0.0014 17.7 0.1 0.016 14.2 0.0 2.0 2 0 0 2 2 2 1 KAP family P-loop domain Miro PF08477.8 AJA92736.1 - 0.0019 18.6 0.0 0.0041 17.5 0.0 1.6 1 0 0 1 1 1 1 Miro-like protein AAA_28 PF13521.1 AJA92736.1 - 0.002 18.1 0.0 0.0062 16.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain KaiC PF06745.8 AJA92736.1 - 0.0029 16.7 0.0 0.0036 16.4 0.0 1.2 1 0 0 1 1 1 1 KaiC Mg_chelatase PF01078.16 AJA92736.1 - 0.0036 16.4 0.1 1.6 7.8 0.0 2.2 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI NB-ARC PF00931.17 AJA92736.1 - 0.0039 16.0 0.0 0.006 15.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain ABC_tran PF00005.22 AJA92736.1 - 0.0063 16.8 0.6 0.029 14.6 0.1 2.1 2 1 1 3 3 2 1 ABC transporter UPF0079 PF02367.12 AJA92736.1 - 0.0078 15.8 0.0 0.016 14.8 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 Septin PF00735.13 AJA92736.1 - 0.0081 15.2 0.8 0.16 10.9 0.0 2.1 2 0 0 2 2 2 1 Septin AAA_24 PF13479.1 AJA92736.1 - 0.0084 15.7 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.9 AJA92736.1 - 0.011 15.7 0.5 0.039 13.8 0.4 2.0 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) cobW PF02492.14 AJA92736.1 - 0.011 15.1 0.1 0.02 14.3 0.1 1.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.1 AJA92736.1 - 0.013 15.1 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain DUF258 PF03193.11 AJA92736.1 - 0.015 14.5 0.0 0.03 13.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 NACHT PF05729.7 AJA92736.1 - 0.015 14.9 0.0 0.028 14.0 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Viral_helicase1 PF01443.13 AJA92736.1 - 0.02 14.4 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.1 AJA92736.1 - 0.021 14.4 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 AJA92736.1 - 0.022 13.6 0.0 0.043 12.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.1 AJA92736.1 - 0.028 13.9 0.2 0.083 12.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 AJA92736.1 - 0.031 14.4 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_29 PF13555.1 AJA92736.1 - 0.031 13.7 0.0 0.066 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_32 PF13654.1 AJA92736.1 - 0.041 12.5 0.0 0.066 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 AJA92736.1 - 0.08 12.3 0.1 0.14 11.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain PduV-EutP PF10662.4 AJA92736.1 - 0.085 12.3 0.0 0.29 10.5 0.0 1.9 2 0 0 2 2 1 0 Ethanolamine utilisation - propanediol utilisation Aldo_ket_red PF00248.16 AJA92737.1 - 2.1e-52 177.6 0.1 2.4e-52 177.5 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family ATP-synt_ab PF00006.20 AJA92738.1 - 4.1e-95 317.3 0.0 5.6e-95 316.8 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 AJA92738.1 - 2.3e-14 53.8 0.7 4.3e-14 52.9 0.5 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 AJA92738.1 - 1e-12 48.0 0.2 2.5e-12 46.8 0.1 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_19 PF13245.1 AJA92738.1 - 0.0052 16.5 0.1 0.15 11.8 0.0 2.5 2 0 0 2 2 2 1 Part of AAA domain AAA_22 PF13401.1 AJA92738.1 - 0.084 13.0 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF853 PF05872.7 AJA92738.1 - 0.084 11.2 0.2 0.13 10.5 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) RnfC_N PF13375.1 AJA92738.1 - 0.19 11.4 0.7 13 5.5 0.0 3.2 2 1 1 3 3 3 0 RnfC Barrel sandwich hybrid domain HTH_Tnp_Tc5 PF03221.11 AJA92739.1 - 0.013 15.3 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain DUF58 PF01882.13 AJA92740.1 - 8.7e-22 77.0 0.0 1.5e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 Ribosomal_L19e PF01280.15 AJA92741.1 - 2e-42 144.4 10.7 2.4e-42 144.2 7.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e PHA_synth_III_E PF09712.5 AJA92742.1 - 0.016 14.6 0.1 0.021 14.2 0.1 1.2 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) DUF399 PF04187.8 AJA92742.1 - 0.029 13.8 0.0 0.03 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF399 FBD PF08387.5 AJA92742.1 - 0.038 13.4 0.2 0.062 12.7 0.1 1.4 1 0 0 1 1 1 0 FBD DUF1068 PF06364.7 AJA92742.1 - 0.082 12.5 0.1 0.087 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) DUF1297 PF06973.7 AJA92743.1 - 2.1e-73 245.6 0.3 2.8e-73 245.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 AJA92743.1 - 6.5e-50 168.0 0.0 1.1e-49 167.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_3 PF02655.9 AJA92743.1 - 0.0055 16.5 0.0 0.018 14.9 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain SPO22 PF08631.5 AJA92744.1 - 0.0057 15.7 1.0 0.0067 15.5 0.7 1.2 1 0 0 1 1 1 1 Meiosis protein SPO22/ZIP4 like Scramblase PF03803.10 AJA92744.1 - 0.067 12.2 0.1 0.079 12.0 0.1 1.1 1 0 0 1 1 1 0 Scramblase USP8_interact PF08941.5 AJA92744.1 - 0.1 11.8 0.4 0.13 11.5 0.3 1.2 1 0 0 1 1 1 0 USP8 interacting DUF2115 PF09888.4 AJA92744.1 - 0.12 12.5 3.7 0.15 12.1 2.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) DMPK_coil PF08826.5 AJA92744.1 - 0.17 11.8 6.0 0.074 12.9 2.3 1.9 2 0 0 2 2 2 0 DMPK coiled coil domain like Flp_N PF03930.9 AJA92744.1 - 0.3 10.8 3.0 5.5 6.8 0.4 2.4 1 1 0 2 2 2 0 Recombinase Flp protein N-terminus RRP7 PF12923.2 AJA92744.1 - 0.39 10.7 5.2 2.8 7.9 1.2 2.2 2 0 0 2 2 2 0 Ribosomal RNA-processing protein 7 (RRP7) Bac_small_YrzI PF09501.5 AJA92744.1 - 0.84 9.5 6.2 0.68 9.8 0.2 2.4 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) Kinesin-relat_1 PF12711.2 AJA92744.1 - 1.3 9.4 8.5 4.4 7.7 5.9 1.9 1 1 0 1 1 1 0 Kinesin motor Cir_N PF10197.4 AJA92744.1 - 1.8 8.6 5.9 5.2 7.1 4.1 1.9 1 0 0 1 1 1 0 N-terminal domain of CBF1 interacting co-repressor CIR 7TMR-DISM_7TM PF07695.6 AJA92747.1 - 0.035 13.7 12.7 0.05 13.2 8.8 1.2 1 0 0 1 1 1 0 7TM diverse intracellular signalling Pentapeptide_4 PF13599.1 AJA92747.1 - 0.098 12.4 0.5 0.29 10.9 0.1 1.8 2 0 0 2 2 2 0 Pentapeptide repeats (9 copies) MerC PF03203.9 AJA92747.1 - 0.1 12.9 4.5 0.18 12.1 3.0 1.5 1 1 0 1 1 1 0 MerC mercury resistance protein DUF998 PF06197.8 AJA92747.1 - 0.16 11.3 5.1 0.21 10.8 3.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF998) Peptidase_U4 PF03419.8 AJA92747.1 - 3 6.8 13.2 3.7 6.5 9.1 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Gram_pos_anchor PF00746.16 AJA92747.1 - 4.3 7.2 6.9 18 5.3 0.0 3.2 4 0 0 4 4 4 0 Gram positive anchor DUF2393 PF09624.5 AJA92747.1 - 9.9 5.6 10.7 2.4 7.6 1.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2393) Rhodanese PF00581.15 AJA92748.1 - 2.2e-43 147.2 0.1 8.6e-21 74.4 0.0 2.0 2 0 0 2 2 2 2 Rhodanese-like domain Gcd10p PF04189.8 AJA92748.1 - 0.15 11.2 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Gcd10p family Ribosomal_S3Ae PF01015.13 AJA92749.1 - 2.9e-62 209.4 8.7 3.3e-62 209.2 6.1 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF4468 PF14730.1 AJA92749.1 - 0.016 14.8 0.5 0.045 13.4 0.3 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold DUF1062 PF06353.7 AJA92749.1 - 0.037 14.2 0.2 0.062 13.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) TPR_11 PF13414.1 AJA92750.1 - 7.9e-24 83.1 7.0 2.9e-11 42.8 0.2 3.5 2 2 2 4 4 4 4 TPR repeat TPR_1 PF00515.23 AJA92750.1 - 9.8e-22 75.6 8.0 5.7e-05 22.5 0.0 5.6 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92750.1 - 2.9e-19 67.3 3.4 0.0054 16.5 0.0 5.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92750.1 - 2.6e-17 61.5 2.9 1.5e-05 24.8 0.0 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92750.1 - 3.1e-14 53.1 0.0 1e-05 26.0 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92750.1 - 1.5e-13 50.4 0.6 0.006 16.4 0.1 3.4 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92750.1 - 3.3e-13 49.7 2.9 1.2e-06 28.7 0.1 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92750.1 - 3.8e-13 48.8 0.1 0.0053 17.2 0.0 4.8 1 1 4 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.1 AJA92750.1 - 8.8e-12 43.8 1.1 0.25 11.2 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 AJA92750.1 - 1.1e-08 35.0 6.9 6.3e-05 23.0 0.2 2.9 2 1 1 3 3 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.1 AJA92750.1 - 1.2e-08 34.1 5.8 1.6 8.6 0.0 5.2 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_10 PF13374.1 AJA92750.1 - 1.6e-08 34.1 0.1 0.12 12.3 0.0 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA92750.1 - 1.3e-07 31.3 3.0 0.1 12.4 0.0 4.8 3 2 2 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.1 AJA92750.1 - 3.1e-07 30.1 0.0 0.029 14.2 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat DUF3856 PF12968.2 AJA92750.1 - 8e-06 25.7 0.2 0.8 9.5 0.0 4.1 2 2 2 4 4 4 2 Domain of Unknown Function (DUF3856) TPR_20 PF14561.1 AJA92750.1 - 1.2e-05 25.3 3.1 0.0084 16.2 0.0 3.5 2 1 2 4 4 3 1 Tetratricopeptide repeat Coatomer_E PF04733.9 AJA92750.1 - 1.4e-05 24.4 4.7 0.03 13.5 0.2 3.0 1 1 2 3 3 3 2 Coatomer epsilon subunit TPR_15 PF13429.1 AJA92750.1 - 0.0012 17.9 0.0 0.0027 16.8 0.0 1.6 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92750.1 - 0.0013 19.0 4.0 4.6 7.9 0.0 4.6 5 0 0 5 5 4 1 Tetratricopeptide repeat MIT PF04212.13 AJA92750.1 - 0.0046 16.8 4.7 0.067 13.0 0.0 3.8 5 0 0 5 5 4 1 MIT (microtubule interacting and transport) domain TPR_5 PF12688.2 AJA92750.1 - 0.019 14.9 0.3 0.8 9.7 0.1 2.8 2 1 1 3 3 3 0 Tetratrico peptide repeat Alkyl_sulf_dimr PF14863.1 AJA92750.1 - 0.048 13.8 0.5 8.4 6.6 0.0 2.8 2 2 1 3 3 3 0 Alkyl sulfatase dimerisation SBP_bac_3 PF00497.15 AJA92750.1 - 0.063 12.5 0.1 0.13 11.4 0.1 1.6 1 1 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 Fibrillarin PF01269.12 AJA92751.1 - 1.6e-83 279.1 0.1 1.9e-83 278.8 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.5 AJA92751.1 - 0.00059 19.4 0.0 0.00073 19.1 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.14 AJA92751.1 - 0.003 17.1 0.0 0.0046 16.5 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Disulph_isomer PF06491.6 AJA92751.1 - 0.077 12.8 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Disulphide isomerase eIF-6 PF01912.13 AJA92752.1 - 5.8e-61 205.0 3.3 6.9e-61 204.8 2.3 1.1 1 0 0 1 1 1 1 eIF-6 family MBA1 PF07961.6 AJA92752.1 - 0.057 12.2 0.0 0.093 11.5 0.0 1.3 1 0 0 1 1 1 0 MBA1-like protein YjeF_N PF03853.10 AJA92753.1 - 6.4e-47 159.2 0.0 7.5e-47 159.0 0.0 1.0 1 0 0 1 1 1 1 YjeF-related protein N-terminus MEDS PF14417.1 AJA92754.1 - 0.0022 17.0 0.3 0.0033 16.5 0.2 1.5 1 1 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF3655 PF12379.3 AJA92754.1 - 0.25 11.3 0.2 0.25 11.3 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3655) EPSP_synthase PF00275.15 AJA92755.1 - 5.1e-98 328.2 0.1 6.2e-98 327.9 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Clp_N PF02861.15 AJA92755.1 - 0.026 14.4 0.2 32 4.5 0.0 3.4 3 0 0 3 3 3 0 Clp amino terminal domain eRF1_1 PF03463.10 AJA92756.1 - 2.1e-17 62.9 1.5 3.6e-17 62.1 1.1 1.3 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.10 AJA92756.1 - 1.4e-11 44.8 0.5 3.1e-11 43.7 0.0 1.8 2 0 0 2 2 2 1 eRF1 domain 2 eRF1_3 PF03465.10 AJA92756.1 - 2.4e-10 40.6 0.7 1.2e-09 38.3 0.1 2.3 2 0 0 2 2 2 1 eRF1 domain 3 HTH_34 PF13601.1 AJA92757.1 - 0.0018 18.2 0.1 0.0032 17.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 AJA92757.1 - 0.0033 17.1 0.0 0.0052 16.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 AJA92757.1 - 0.0033 17.5 0.0 0.0059 16.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.12 AJA92757.1 - 0.0065 15.9 0.9 0.01 15.3 0.6 1.5 1 1 0 1 1 1 1 TFIIE alpha subunit DUF4423 PF14394.1 AJA92757.1 - 0.01 15.4 0.1 0.015 14.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) EAP30 PF04157.11 AJA92757.1 - 0.015 14.4 0.6 2.1 7.4 0.1 2.0 2 0 0 2 2 2 0 EAP30/Vps36 family HTH_27 PF13463.1 AJA92757.1 - 0.016 15.5 0.1 0.033 14.5 0.0 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.1 AJA92757.1 - 0.035 13.9 0.0 0.063 13.1 0.0 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix DUF2031 PF09592.5 AJA92757.1 - 0.056 12.5 0.4 0.066 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2031) HxlR PF01638.12 AJA92757.1 - 0.06 12.9 0.2 0.12 11.9 0.1 1.6 1 1 1 2 2 2 0 HxlR-like helix-turn-helix B-block_TFIIIC PF04182.7 AJA92757.1 - 0.076 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Fe_dep_repress PF01325.14 AJA92757.1 - 0.084 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Myb_DNA-bind_4 PF13837.1 AJA92757.1 - 0.14 12.3 1.3 0.22 11.6 0.8 1.4 1 1 0 1 1 1 0 Myb/SANT-like DNA-binding domain DUF2250 PF10007.4 AJA92757.1 - 0.17 11.8 0.4 0.79 9.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) A_deaminase_N PF08451.6 AJA92757.1 - 0.18 11.8 1.7 1.3 9.0 0.4 2.1 1 1 1 2 2 2 0 Adenosine/AMP deaminase N-terminal zf-C3HC4_3 PF13920.1 AJA92761.1 - 0.0088 15.7 1.0 0.011 15.4 0.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) P12 PF12669.2 AJA92761.1 - 0.012 15.7 2.8 0.018 15.2 1.9 1.3 1 1 0 1 1 1 0 Virus attachment protein p12 family PolC_DP2 PF03833.8 AJA92761.1 - 0.014 13.0 0.6 0.014 13.0 0.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Laminin_EGF PF00053.19 AJA92761.1 - 0.035 14.0 1.7 0.039 13.8 1.2 1.1 1 0 0 1 1 1 0 Laminin EGF-like (Domains III and V) DUF3565 PF12088.3 AJA92761.1 - 0.18 11.5 2.3 0.43 10.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3565) zf-MYND PF01753.13 AJA92761.1 - 0.19 11.5 4.1 0.29 11.0 2.8 1.3 1 0 0 1 1 1 0 MYND finger PhnA_Zn_Ribbon PF08274.7 AJA92761.1 - 0.28 11.0 5.4 5.6 6.8 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.1 AJA92761.1 - 0.35 10.1 5.9 3.7 6.8 0.4 2.1 1 1 2 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 AJA92761.1 - 1.2 9.0 6.4 1.1 9.1 0.2 2.1 1 1 0 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 AJA92761.1 - 2.6 8.0 7.8 2.1e+02 1.9 5.4 2.1 1 1 0 1 1 1 0 Zinc ribbon domain TFIIS_C PF01096.13 AJA92761.1 - 3.4 7.3 6.4 9.5 5.9 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) CcmH PF03918.9 AJA92761.1 - 4.1 6.4 4.8 11 5.0 0.6 2.0 1 1 1 2 2 2 0 Cytochrome C biogenesis protein Cupin_2 PF07883.6 AJA92762.1 - 1.9e-10 40.1 0.0 2.6e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 AJA92762.1 - 3.6e-08 32.9 0.0 4.5e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 Cupin MannoseP_isomer PF01050.13 AJA92762.1 - 1.3e-07 31.3 0.0 1.3e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.14 AJA92762.1 - 2.1e-05 24.2 0.0 2.7e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain GPI PF06560.6 AJA92762.1 - 0.00067 18.7 0.1 0.0011 18.0 0.1 1.4 1 1 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Ectoine_synth PF06339.7 AJA92762.1 - 0.0033 17.3 0.1 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Ectoine synthase Auxin_BP PF02041.11 AJA92762.1 - 0.0077 15.6 0.0 0.016 14.6 0.0 1.6 1 1 0 1 1 1 1 Auxin binding protein CENP-C_C PF11699.3 AJA92762.1 - 0.041 13.8 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like Cupin_5 PF06172.6 AJA92762.1 - 0.044 13.6 0.0 6.1 6.7 0.0 2.6 1 1 1 2 2 2 0 Cupin superfamily (DUF985) A2M_N PF01835.14 AJA92764.1 - 0.0043 17.2 0.0 0.0091 16.2 0.0 1.6 1 1 1 2 2 2 1 MG2 domain Gmad2 PF10648.4 AJA92764.1 - 0.032 14.3 0.5 0.16 12.1 0.2 2.0 1 1 1 2 2 2 0 Immunoglobulin-like domain of bacterial spore germination DUF4369 PF14289.1 AJA92764.1 - 0.047 13.7 0.1 0.097 12.6 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4369) DegT_DnrJ_EryC1 PF01041.12 AJA92765.1 - 1.7e-53 181.9 0.0 5.1e-36 124.4 0.0 2.0 2 0 0 2 2 2 2 DegT/DnrJ/EryC1/StrS aminotransferase family CoA_binding_2 PF13380.1 AJA92766.1 - 6.6e-39 132.6 0.1 7.7e-39 132.4 0.1 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.14 AJA92766.1 - 1e-07 32.3 0.1 1.6e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 CoA binding domain TroA PF01297.12 AJA92766.1 - 0.0051 16.1 0.0 0.0087 15.3 0.0 1.3 1 0 0 1 1 1 1 Periplasmic solute binding protein family Glyco_hydro_57 PF03065.10 AJA92766.1 - 0.019 13.9 0.0 0.027 13.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 SpoU_sub_bind PF08032.7 AJA92766.1 - 0.075 13.2 0.7 1.3 9.2 0.1 2.3 2 1 1 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding Coatomer_b_Cpla PF14806.1 AJA92767.1 - 0.091 12.4 0.1 2.5 7.8 0.0 2.3 1 1 1 2 2 2 0 Coatomer beta subunit appendage platform DUF1771 PF08590.5 AJA92768.1 - 9e-06 25.6 0.5 0.13 12.2 0.0 3.4 3 0 0 3 3 3 2 Domain of unknown function (DUF1771) Lamp PF01299.12 AJA92768.1 - 0.031 13.4 0.2 0.057 12.5 0.1 1.4 1 0 0 1 1 1 0 Lysosome-associated membrane glycoprotein (Lamp) HPS3_C PF14763.1 AJA92768.1 - 0.057 12.3 0.0 0.11 11.4 0.0 1.4 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, C-terminal DUF1180 PF06679.7 AJA92768.1 - 0.35 10.7 2.2 0.72 9.7 1.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) LON PF02190.11 AJA92770.1 - 5.3e-09 36.0 0.0 6.2e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 ATP-dependent protease La (LON) domain Latrotoxin_C PF15658.1 AJA92770.1 - 0.035 13.9 0.2 0.053 13.3 0.1 1.2 1 0 0 1 1 1 0 Latrotoxin C-terminal domain DUF4047 PF13256.1 AJA92770.1 - 0.037 13.9 1.7 0.056 13.4 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) Guanylin PF02058.10 AJA92770.1 - 0.081 12.9 0.5 1.1 9.3 0.3 2.4 1 1 1 2 2 2 0 Guanylin precursor Asn_synthase PF00733.16 AJA92771.1 - 1.1e-34 120.0 0.0 1.4e-33 116.4 0.0 2.0 1 1 0 1 1 1 1 Asparagine synthase zinc_ribbon_2 PF13240.1 AJA92771.1 - 4.6e-05 22.7 1.9 0.00011 21.5 1.3 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 AJA92771.1 - 0.00024 20.8 4.2 0.00026 20.7 1.9 1.7 2 0 0 2 2 2 1 Double zinc ribbon zf-ribbon_3 PF13248.1 AJA92771.1 - 0.0012 17.9 3.2 0.0022 17.1 2.2 1.4 1 0 0 1 1 1 1 zinc-ribbon domain UPF0547 PF10571.4 AJA92771.1 - 0.0069 16.0 1.9 0.013 15.1 1.3 1.4 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 NAD_synthase PF02540.12 AJA92771.1 - 0.0074 15.2 0.0 0.011 14.6 0.0 1.3 1 0 0 1 1 1 1 NAD synthase zf-DHHC PF01529.15 AJA92771.1 - 0.026 13.9 0.4 0.041 13.2 0.3 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase ATP_bind_3 PF01171.15 AJA92771.1 - 0.039 13.4 0.0 0.065 12.7 0.0 1.4 1 0 0 1 1 1 0 PP-loop family tRNA_Me_trans PF03054.11 AJA92771.1 - 0.04 12.4 0.0 0.07 11.6 0.0 1.4 1 0 0 1 1 1 0 tRNA methyl transferase QueC PF06508.8 AJA92771.1 - 0.079 12.2 0.0 0.18 11.0 0.0 1.7 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.14 AJA92771.1 - 0.1 12.4 0.0 0.21 11.4 0.0 1.5 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Formyl_trans_N PF00551.14 AJA92772.1 - 2.3e-45 154.3 0.1 3.2e-45 153.9 0.1 1.2 1 0 0 1 1 1 1 Formyl transferase ACT_6 PF13740.1 AJA92772.1 - 9.8e-09 34.8 0.1 3.6e-08 33.0 0.0 2.0 2 0 0 2 2 2 1 ACT domain LCD1 PF09798.4 AJA92772.1 - 0.0083 14.1 0.5 0.011 13.7 0.4 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein Ctf8 PF09696.5 AJA92772.1 - 0.05 13.3 0.5 0.083 12.6 0.3 1.3 1 0 0 1 1 1 0 Ctf8 ACT PF01842.20 AJA92772.1 - 0.072 12.6 0.0 0.19 11.2 0.0 1.8 1 0 0 1 1 1 0 ACT domain Phage_Cox PF10743.4 AJA92772.1 - 0.12 12.4 0.1 0.33 11.0 0.1 1.7 1 1 0 1 1 1 0 Regulatory phage protein cox M PF02370.11 AJA92773.1 - 0.033 14.5 2.3 0.033 14.5 1.6 2.9 3 0 0 3 3 3 0 M protein repeat Striatin PF08232.7 AJA92773.1 - 2.5 8.3 6.9 1.2 9.4 0.8 2.3 2 0 0 2 2 2 0 Striatin family ERM PF00769.14 AJA92773.1 - 3.4 7.1 10.1 0.15 11.5 3.1 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family UPF0126 PF03458.8 AJA92774.1 - 4.7e-45 151.1 21.9 4.8e-23 80.5 3.7 2.3 2 0 0 2 2 2 2 UPF0126 domain TRIC PF05197.8 AJA92774.1 - 0.001 18.5 4.7 0.0023 17.3 0.2 2.1 1 1 1 2 2 2 2 TRIC channel DUF1212 PF06738.7 AJA92774.1 - 6.6 6.1 18.4 0.45 9.9 3.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1212) RNA_pol_Rpb2_6 PF00562.23 AJA92775.1 - 1.5e-122 409.1 0.3 2.1e-122 408.6 0.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.10 AJA92775.1 - 3.6e-54 182.7 0.0 5.5e-54 182.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.11 AJA92775.1 - 1.6e-27 94.9 0.2 4.3e-27 93.6 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.15 AJA92775.1 - 4.1e-27 94.2 0.0 1e-26 92.9 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.9 AJA92775.1 - 4.6e-25 88.1 0.0 9.9e-25 87.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_4 PF04566.8 AJA92775.1 - 5.4e-15 54.9 0.1 1.4e-14 53.6 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 AJA92775.1 - 2.6e-12 46.5 0.1 5.4e-12 45.4 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Ribosomal_L37e PF01907.14 AJA92775.1 - 0.051 13.3 0.5 0.11 12.2 0.3 1.5 1 0 0 1 1 1 0 Ribosomal protein L37e OrfB_Zn_ribbon PF07282.6 AJA92775.1 - 0.22 11.2 1.3 0.75 9.5 0.9 1.9 1 0 0 1 1 1 0 Putative transposase DNA-binding domain SMC_N PF02463.14 AJA92776.1 - 3.7e-51 173.4 25.2 8.8e-30 103.5 0.1 4.3 3 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 AJA92776.1 - 5.3e-21 75.8 6.2 5.3e-21 75.8 4.3 6.4 3 2 1 4 4 4 1 AAA domain SMC_hinge PF06470.8 AJA92776.1 - 4.4e-16 58.9 0.0 1.9e-15 56.8 0.0 2.2 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.1 AJA92776.1 - 3.6e-08 33.7 5.5 3.6e-08 33.7 3.8 5.3 2 2 0 3 3 3 1 AAA domain AAA_29 PF13555.1 AJA92776.1 - 6.3e-06 25.6 0.0 1.8e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 AJA92776.1 - 0.012 15.5 0.8 0.078 12.9 0.0 2.7 3 0 0 3 3 3 0 AAA ATPase domain AAA_13 PF13166.1 AJA92776.1 - 0.012 14.0 112.8 0.0047 15.4 8.0 7.3 3 2 4 7 7 7 0 AAA domain Reo_sigmaC PF04582.7 AJA92776.1 - 1.4 8.0 51.5 0.37 9.9 5.0 5.6 2 2 4 6 6 6 0 Reovirus sigma C capsid protein APG6 PF04111.7 AJA92776.1 - 3.5 6.5 94.5 0.29 10.1 10.8 6.5 3 2 4 7 7 7 0 Autophagy protein Apg6 DNase-RNase PF02577.9 AJA92777.1 - 4.5e-09 35.6 0.0 4.9e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease Chorismate_bind PF00425.13 AJA92778.1 - 1.1e-94 316.5 0.1 1e-92 310.1 0.0 2.4 2 1 1 3 3 3 2 chorismate binding enzyme Anth_synt_I_N PF04715.8 AJA92778.1 - 3e-22 79.1 0.1 2.2e-20 73.1 0.0 2.6 3 0 0 3 3 3 1 Anthranilate synthase component I, N terminal region HTH_40 PF14493.1 AJA92778.1 - 0.091 12.9 2.9 3 8.1 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain Usp PF00582.21 AJA92779.1 - 5.9e-29 101.0 0.0 6.8e-29 100.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family CobS PF02654.10 AJA92780.1 - 1.6e-53 181.6 15.4 1.9e-53 181.4 10.7 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase PRA1 PF03208.14 AJA92780.1 - 0.33 10.2 8.9 4.4 6.6 2.0 2.2 1 1 1 2 2 2 0 PRA1 family protein CopD PF05425.8 AJA92780.1 - 7.6 6.7 12.8 1.1 9.5 1.4 3.0 1 1 1 3 3 3 0 Copper resistance protein D GlutR_N PF05201.10 AJA92781.1 - 1e-40 138.8 0.0 1.9e-40 137.8 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 AJA92781.1 - 2.9e-24 85.7 0.2 8.7e-24 84.1 0.0 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.15 AJA92781.1 - 1.3e-20 73.2 1.6 2.5e-20 72.2 1.1 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.12 AJA92781.1 - 0.0013 19.1 0.0 0.0035 17.7 0.0 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 AJA92781.1 - 0.0039 16.3 0.0 0.013 14.6 0.0 1.9 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 AJA92781.1 - 0.0098 15.9 0.0 0.031 14.2 0.0 1.9 3 0 0 3 3 3 1 NADH(P)-binding NAD_binding_7 PF13241.1 AJA92781.1 - 0.034 14.3 0.0 0.11 12.7 0.0 1.9 1 1 0 1 1 1 0 Putative NAD(P)-binding HMG_CoA_synt_C PF08540.5 AJA92781.1 - 0.072 12.5 0.2 0.15 11.5 0.2 1.5 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal ALIX_LYPXL_bnd PF13949.1 AJA92781.1 - 0.25 10.2 6.9 0.13 11.2 2.4 2.1 2 1 0 2 2 2 0 ALIX V-shaped domain binding to HIV ATP-cone PF03477.11 AJA92781.1 - 0.26 11.7 5.2 3.6 8.0 0.1 4.0 3 2 0 3 3 3 0 ATP cone domain Copper-bind PF00127.15 AJA92782.1 - 0.0018 18.4 0.0 0.0064 16.6 0.0 1.8 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 AJA92782.1 - 0.0021 17.9 0.0 0.0033 17.2 0.0 1.4 1 0 0 1 1 1 1 Cupredoxin-like domain PTPS_related PF10131.4 AJA92782.1 - 0.19 9.8 3.7 0.22 9.6 2.6 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein DUF998 PF06197.8 AJA92782.1 - 9.1 5.5 18.3 12 5.1 9.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF998) Glycos_transf_1 PF00534.15 AJA92783.1 - 5.4e-24 84.5 0.4 1.9e-23 82.7 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 AJA92783.1 - 6.8e-15 55.4 0.0 1.1e-14 54.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 AJA92783.1 - 2.6e-10 40.4 0.0 4.8e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 AJA92783.1 - 4.1e-06 25.8 0.0 0.022 13.5 0.0 2.2 2 0 0 2 2 2 2 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.1 AJA92783.1 - 0.041 13.7 0.2 0.23 11.2 0.1 2.1 1 1 0 1 1 1 0 Glycosyl transferase 4-like Exosortase_EpsH PF09721.5 AJA92784.1 - 4.1e-06 26.2 25.9 7.3e-06 25.3 18.0 1.4 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) DUF998 PF06197.8 AJA92784.1 - 3.4 6.9 24.2 0.013 14.7 5.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF998) PALP PF00291.20 AJA92785.1 - 8.6e-81 271.5 0.8 1.1e-80 271.1 0.6 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.1 AJA92785.1 - 0.00016 21.9 1.1 0.00075 19.7 0.6 2.1 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 AJA92785.1 - 0.05 13.0 0.1 0.16 11.5 0.1 1.8 1 0 0 1 1 1 0 ACT domain RNA_pol_Rpb4 PF03874.11 AJA92786.1 - 1.7e-14 53.8 4.5 2.3e-14 53.3 3.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF421 PF04239.7 AJA92786.1 - 0.013 14.9 0.6 0.014 14.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF421) Blo-t-5 PF11642.3 AJA92786.1 - 0.015 15.0 0.6 0.021 14.5 0.3 1.5 1 1 0 1 1 1 0 Mite allergen Blo t 5 Vitellogenin_N PF01347.17 AJA92786.1 - 0.018 13.2 0.2 0.02 13.1 0.1 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region Fer2_BFD PF04324.10 AJA92786.1 - 0.031 14.3 0.1 0.19 11.8 0.0 2.1 2 0 0 2 2 2 0 BFD-like [2Fe-2S] binding domain Integrase_Zn PF02022.14 AJA92786.1 - 0.04 13.3 0.2 0.072 12.5 0.1 1.4 1 0 0 1 1 1 0 Integrase Zinc binding domain LRR_5 PF13306.1 AJA92786.1 - 0.046 13.4 0.5 0.13 11.9 0.1 1.7 1 1 0 1 1 1 0 Leucine rich repeats (6 copies) Nit_Regul_Hom PF10126.4 AJA92786.1 - 0.14 11.9 1.3 9.8 6.0 0.0 2.2 1 1 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Hexokinase_2 PF03727.11 AJA92786.1 - 0.15 11.2 1.0 0.18 10.9 0.7 1.1 1 0 0 1 1 1 0 Hexokinase Orbi_VP5 PF00901.12 AJA92786.1 - 0.24 9.5 2.8 0.27 9.3 1.9 1.0 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 DUF970 PF06153.6 AJA92787.1 - 0.005 16.7 0.4 0.0073 16.2 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF970) Toprim_N PF08275.6 AJA92787.1 - 0.027 14.4 0.3 0.061 13.2 0.2 1.6 1 1 1 2 2 2 0 DNA primase catalytic core, N-terminal domain DUF619 PF04768.8 AJA92787.1 - 0.044 13.1 0.7 0.056 12.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF619) OGG_N PF07934.7 AJA92788.1 - 1.1e-15 57.6 4.1 1.1e-14 54.3 0.5 3.0 2 1 0 2 2 2 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.20 AJA92788.1 - 3.5e-11 43.3 0.0 5.7e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 AJA92788.1 - 0.0012 18.4 0.0 0.023 14.3 0.0 2.7 3 0 0 3 3 3 1 Helix-hairpin-helix motif Ribosomal_S13 PF00416.17 AJA92788.1 - 0.019 15.3 0.1 3.7 8.0 0.0 2.8 2 1 0 2 2 2 0 Ribosomal protein S13/S18 AlkA_N PF06029.6 AJA92788.1 - 0.031 14.3 0.0 0.076 13.0 0.0 1.6 1 0 0 1 1 1 0 AlkA N-terminal domain PYRIN PF02758.11 AJA92788.1 - 0.034 13.8 0.6 0.38 10.4 0.0 2.4 2 0 0 2 2 2 0 PAAD/DAPIN/Pyrin domain Transket_pyr PF02779.19 AJA92789.1 - 6.4e-34 116.9 0.0 8.8e-34 116.5 0.0 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.15 AJA92789.1 - 4.8e-30 104.0 0.0 9.4e-30 103.0 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain Asp_Glu_race PF01177.17 AJA92789.1 - 0.052 13.4 0.2 0.1 12.4 0.1 1.5 1 1 0 1 1 1 0 Asp/Glu/Hydantoin racemase DUF1998 PF09369.5 AJA92790.1 - 3e-06 27.6 0.1 9.9e-06 26.0 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Cys_rich_CPCC PF14206.1 AJA92790.1 - 0.024 14.1 5.7 0.55 9.8 0.0 2.7 2 0 0 2 2 2 0 Cysteine-rich CPCC Zn_Tnp_IS1595 PF12760.2 AJA92790.1 - 0.42 10.4 10.5 26 4.7 6.9 2.8 1 1 1 2 2 2 0 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.7 AJA92790.1 - 0.86 8.9 7.2 5.1 6.4 1.9 3.1 1 1 1 2 2 2 0 TFIIB zinc-binding NCD3G PF07562.9 AJA92790.1 - 6.1 6.6 18.3 3.2 7.5 2.0 3.5 2 1 1 3 3 3 0 Nine Cysteines Domain of family 3 GPCR Zn-ribbon_8 PF09723.5 AJA92790.1 - 6.8 6.7 14.0 0.23 11.4 0.3 3.0 3 0 0 3 3 3 0 Zinc ribbon domain HypA PF01155.14 AJA92790.1 - 6.8 6.4 9.0 17 5.1 3.0 3.0 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF4131 PF13567.1 AJA92791.1 - 0.0009 18.6 3.7 0.14 11.5 0.0 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF4131) Tetraspannin PF00335.15 AJA92791.1 - 0.0013 18.0 4.4 0.0022 17.3 3.0 1.4 1 0 0 1 1 1 1 Tetraspanin family Sulfatase PF00884.18 AJA92791.1 - 0.13 11.4 0.0 0.43 9.7 0.0 1.7 1 1 0 1 1 1 0 Sulfatase Pox_A28 PF04584.9 AJA92791.1 - 0.15 11.9 6.3 0.38 10.6 0.0 3.3 3 0 0 3 3 3 0 Poxvirus A28 family DUF1705 PF08019.7 AJA92791.1 - 2.5 7.5 10.1 0.28 10.6 1.7 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF1705) PhoU_div PF01865.11 AJA92792.1 - 1.8e-15 56.7 10.7 2.1e-15 56.4 7.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 AJA92792.1 - 0.0053 17.1 12.9 0.15 12.5 3.2 3.0 2 2 1 3 3 3 2 PhoU domain DUF904 PF06005.7 AJA92792.1 - 0.015 15.6 8.8 0.086 13.1 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF904) Reo_sigmaC PF04582.7 AJA92792.1 - 0.02 14.0 3.9 0.031 13.4 2.6 1.4 1 1 0 1 1 1 0 Reovirus sigma C capsid protein Laminin_I PF06008.9 AJA92792.1 - 0.045 13.0 4.6 0.062 12.6 0.3 2.7 1 1 2 3 3 3 0 Laminin Domain I WD40_alt PF14077.1 AJA92792.1 - 0.079 12.6 0.7 0.17 11.5 0.1 1.9 2 0 0 2 2 2 0 Alternative WD40 repeat motif MCPsignal PF00015.16 AJA92792.1 - 0.13 11.8 6.7 0.45 10.0 2.0 2.8 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF465 PF04325.8 AJA92792.1 - 0.47 10.1 6.1 10 5.9 0.0 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF465) CorA PF01544.13 AJA92792.1 - 0.96 8.4 6.1 0.7 8.8 0.3 2.4 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein FlxA PF14282.1 AJA92792.1 - 2.3 8.1 9.2 3.2 7.7 1.7 2.7 2 1 1 3 3 3 0 FlxA-like protein TSC22 PF01166.13 AJA92792.1 - 2.7 8.0 6.4 3.3 7.7 0.0 3.7 3 1 1 4 4 4 0 TSC-22/dip/bun family ISG65-75 PF11727.3 AJA92792.1 - 3.3 6.7 5.3 0.76 8.7 0.1 2.0 2 1 0 2 2 2 0 Invariant surface glycoprotein DUF1192 PF06698.6 AJA92792.1 - 3.8 7.3 8.7 17 5.3 0.1 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF1192) bZIP_2 PF07716.10 AJA92792.1 - 4 7.3 7.6 1.1 9.1 0.4 2.8 3 0 0 3 3 3 0 Basic region leucine zipper RNA_pol_L_2 PF13656.1 AJA92794.1 - 2.7e-14 52.3 0.1 3e-14 52.2 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Pcc1 PF09341.5 AJA92795.1 - 2.8e-05 24.0 0.0 3.3e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Cript PF10235.4 AJA92796.1 - 0.079 13.3 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT ABC_tran PF00005.22 AJA92797.1 - 3.6e-39 134.2 1.0 2.1e-19 70.1 0.1 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 AJA92797.1 - 6.5e-12 46.0 2.9 0.046 13.6 0.7 4.4 2 2 1 3 3 3 3 AAA domain RLI PF04068.10 AJA92797.1 - 2.5e-11 42.9 3.0 2.5e-11 42.9 2.1 1.8 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.14 AJA92797.1 - 2.6e-10 39.9 3.3 0.00023 20.4 0.0 2.8 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain Fer4 PF00037.22 AJA92797.1 - 2.5e-09 36.3 12.0 6.5e-09 35.0 4.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 AJA92797.1 - 1.7e-08 33.9 16.7 5.1e-08 32.4 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 AJA92797.1 - 1.8e-06 28.2 10.7 3.7e-06 27.2 7.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 AJA92797.1 - 3.9e-06 26.4 12.8 1.1e-05 25.0 2.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 AJA92797.1 - 1.1e-05 25.1 12.3 1.9e-05 24.3 8.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_29 PF13555.1 AJA92797.1 - 0.0001 21.7 0.1 0.016 14.7 0.0 3.0 3 0 0 3 3 3 1 P-loop containing region of AAA domain Fer4_10 PF13237.1 AJA92797.1 - 0.00022 20.9 1.9 0.00022 20.9 1.3 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_15 PF13175.1 AJA92797.1 - 0.00077 18.6 3.3 1.2 8.1 0.0 3.4 2 1 1 3 3 3 1 AAA ATPase domain SbcCD_C PF13558.1 AJA92797.1 - 0.0024 17.7 0.4 3.5 7.6 0.1 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Fer4_3 PF12798.2 AJA92797.1 - 0.0025 18.2 5.4 0.0025 18.2 3.7 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain NB-ARC PF00931.17 AJA92797.1 - 0.0025 16.7 1.4 0.6 8.9 0.1 2.5 2 0 0 2 2 2 2 NB-ARC domain DUF258 PF03193.11 AJA92797.1 - 0.0029 16.7 0.1 0.049 12.8 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 AJA92797.1 - 0.0041 17.4 3.9 0.94 9.7 0.1 2.9 2 1 0 2 2 2 2 AAA domain Fer4_4 PF12800.2 AJA92797.1 - 0.011 15.9 3.2 0.011 15.9 2.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Miro PF08477.8 AJA92797.1 - 0.016 15.6 0.2 1.2 9.6 0.1 2.7 2 0 0 2 2 2 0 Miro-like protein Fer4_15 PF13459.1 AJA92797.1 - 0.019 15.5 2.8 0.019 15.5 1.9 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_11 PF13247.1 AJA92797.1 - 0.037 13.9 4.9 0.068 13.0 3.4 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 AJA92797.1 - 0.041 14.6 12.2 0.53 11.0 8.6 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 AJA92797.1 - 0.045 13.7 1.0 0.045 13.7 0.7 1.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 AJA92797.1 - 0.062 13.5 13.8 0.15 12.3 9.5 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain MMR_HSR1 PF01926.18 AJA92797.1 - 0.069 13.1 0.1 0.7 9.8 0.0 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.1 AJA92797.1 - 0.073 13.0 2.5 0.76 9.7 0.2 3.1 2 2 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.1 AJA92797.1 - 0.19 11.1 0.6 11 5.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain Fer4_17 PF13534.1 AJA92797.1 - 0.65 10.3 8.1 0.22 11.8 0.7 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 AJA92797.1 - 8.9 6.8 11.4 0.66 10.4 2.9 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain Herpes_U15 PF05613.6 AJA92799.1 - 0.11 12.8 1.6 0.2 12.0 1.1 1.5 1 0 0 1 1 1 0 Human herpesvirus U15 protein DUF1514 PF07438.6 AJA92799.1 - 0.12 12.3 1.2 0.24 11.3 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) PgaD PF13994.1 AJA92799.1 - 0.14 11.6 0.4 0.23 10.9 0.3 1.3 1 0 0 1 1 1 0 PgaD-like protein PufQ PF05398.6 AJA92799.1 - 1.6 8.7 10.5 4 7.5 0.0 3.3 1 1 2 3 3 3 0 PufQ cytochrome subunit SRP54 PF00448.17 AJA92800.1 - 2.2e-69 232.8 0.3 4.6e-69 231.8 0.2 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 AJA92800.1 - 1.8e-30 105.2 5.9 7.1e-30 103.3 2.6 2.7 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.14 AJA92800.1 - 1.1e-16 60.6 1.0 1.1e-16 60.6 0.7 2.4 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.18 AJA92800.1 - 3.5e-10 39.6 0.6 1.6e-09 37.4 0.4 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.9 AJA92800.1 - 2.7e-05 23.9 0.2 9.4e-05 22.1 0.1 2.0 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 AJA92800.1 - 5e-05 22.2 0.2 0.00038 19.3 0.2 2.3 1 1 0 1 1 1 1 ArgK protein cobW PF02492.14 AJA92800.1 - 9.1e-05 21.9 1.0 0.00023 20.6 0.7 1.6 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.1 AJA92800.1 - 0.0002 22.1 0.0 0.00072 20.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain 6PF2K PF01591.13 AJA92800.1 - 0.00021 20.4 0.0 0.00043 19.4 0.0 1.5 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_18 PF13238.1 AJA92800.1 - 0.00035 20.8 1.4 0.0011 19.3 0.1 2.6 3 0 0 3 3 2 1 AAA domain PduV-EutP PF10662.4 AJA92800.1 - 0.00039 19.9 1.2 0.29 10.6 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation MipZ PF09140.6 AJA92800.1 - 0.00088 18.4 0.6 0.027 13.5 0.4 2.3 1 1 0 1 1 1 1 ATPase MipZ MMR_HSR1 PF01926.18 AJA92800.1 - 0.00088 19.2 0.2 0.0032 17.4 0.1 2.0 2 0 0 2 2 1 1 50S ribosome-binding GTPase AAA_33 PF13671.1 AJA92800.1 - 0.0012 18.7 0.0 0.0025 17.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.15 AJA92800.1 - 0.0012 18.5 0.2 0.0034 17.0 0.0 1.8 2 0 0 2 2 2 1 Adenylylsulphate kinase Zeta_toxin PF06414.7 AJA92800.1 - 0.0013 17.8 0.0 0.0023 17.0 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_31 PF13614.1 AJA92800.1 - 0.002 18.0 0.3 0.16 11.9 0.0 2.9 2 1 1 3 3 3 1 AAA domain AAA_30 PF13604.1 AJA92800.1 - 0.0026 17.3 0.1 0.0087 15.6 0.0 1.9 2 0 0 2 2 1 1 AAA domain KTI12 PF08433.5 AJA92800.1 - 0.0036 16.5 1.0 0.0084 15.3 0.0 2.0 2 1 0 2 2 2 1 Chromatin associated protein KTI12 AAA_16 PF13191.1 AJA92800.1 - 0.004 17.1 0.0 0.011 15.7 0.0 1.8 2 0 0 2 2 1 1 AAA ATPase domain VirC1 PF07015.6 AJA92800.1 - 0.006 15.6 0.0 0.013 14.6 0.0 1.4 1 0 0 1 1 1 1 VirC1 protein Thymidylate_kin PF02223.12 AJA92800.1 - 0.012 14.9 1.1 0.039 13.3 0.1 2.2 2 0 0 2 2 2 0 Thymidylate kinase AAA PF00004.24 AJA92800.1 - 0.013 15.7 1.2 0.14 12.3 0.0 3.0 2 2 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Arf PF00025.16 AJA92800.1 - 0.015 14.5 0.2 0.097 11.9 0.0 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_5 PF07728.9 AJA92800.1 - 0.015 15.0 0.3 0.057 13.1 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) SRPRB PF09439.5 AJA92800.1 - 0.027 13.6 0.6 2.1 7.5 0.1 2.5 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit NTPase_1 PF03266.10 AJA92800.1 - 0.035 13.7 0.8 0.11 12.2 0.4 2.0 1 1 0 1 1 1 0 NTPase AAA_22 PF13401.1 AJA92800.1 - 0.038 14.1 0.2 0.25 11.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.22 AJA92800.1 - 0.063 13.5 0.9 0.24 11.6 0.1 2.1 2 0 0 2 2 2 0 ABC transporter DUF815 PF05673.8 AJA92800.1 - 0.065 12.1 0.1 0.12 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) LpxK PF02606.9 AJA92800.1 - 0.085 11.7 0.0 0.15 11.0 0.0 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_26 PF13500.1 AJA92800.1 - 0.14 11.7 0.5 0.7 9.4 0.3 2.1 1 1 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.10 AJA92800.1 - 0.53 9.2 5.0 1.8 7.5 0.3 3.0 3 0 0 3 3 3 0 Anion-transporting ATPase DNA_pol3_delta2 PF13177.1 AJA92801.1 - 4.3e-18 65.5 1.6 3.4e-16 59.3 1.1 2.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.24 AJA92801.1 - 3.3e-12 46.7 0.1 7.5e-12 45.5 0.1 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.6 AJA92801.1 - 8e-11 41.7 0.5 3e-10 39.9 0.1 2.2 2 0 0 2 2 2 1 Replication factor C C-terminal domain Rad17 PF03215.10 AJA92801.1 - 2.2e-10 39.8 1.7 0.00024 19.9 0.0 2.1 1 1 1 2 2 2 2 Rad17 cell cycle checkpoint protein RuvB_N PF05496.7 AJA92801.1 - 6.9e-09 35.0 0.0 1.7e-07 30.5 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 AJA92801.1 - 6.8e-06 25.9 0.1 1.6e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 AJA92801.1 - 0.00011 22.3 0.4 0.0098 15.8 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain AAA_22 PF13401.1 AJA92801.1 - 0.00021 21.4 2.8 0.1 12.7 0.1 2.9 2 1 1 3 3 3 2 AAA domain DNA_pol3_delta PF06144.8 AJA92801.1 - 0.00037 20.0 0.7 0.00085 18.8 0.1 1.8 2 0 0 2 2 2 1 DNA polymerase III, delta subunit TIP49 PF06068.8 AJA92801.1 - 0.00076 18.2 0.1 0.096 11.3 0.0 2.4 1 1 0 2 2 2 1 TIP49 C-terminus DEAD PF00270.24 AJA92801.1 - 0.0012 18.3 0.3 0.054 12.9 0.0 2.5 1 1 1 2 2 2 1 DEAD/DEAH box helicase AAA_3 PF07726.6 AJA92801.1 - 0.0016 18.0 0.0 0.0027 17.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.11 AJA92801.1 - 0.0029 16.8 0.2 1.2 8.3 0.0 2.6 2 0 0 2 2 2 1 PhoH-like protein Mg_chelatase PF01078.16 AJA92801.1 - 0.004 16.3 0.0 0.18 10.9 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI MAP PF03642.8 AJA92801.1 - 0.0085 16.2 0.8 0.021 15.0 0.1 2.0 2 0 0 2 2 1 1 MAP domain AAA_5 PF07728.9 AJA92801.1 - 0.012 15.3 0.4 0.092 12.4 0.3 2.3 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.17 AJA92801.1 - 0.015 14.1 0.1 0.034 13.0 0.0 1.6 1 1 0 1 1 1 0 NB-ARC domain AAA_10 PF12846.2 AJA92801.1 - 0.016 14.6 2.2 1.2 8.5 0.1 2.6 2 1 1 3 3 3 0 AAA-like domain TrwB_AAD_bind PF10412.4 AJA92801.1 - 0.018 13.6 0.0 0.15 10.6 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Sigma54_activat PF00158.21 AJA92801.1 - 0.024 14.1 0.0 3.4 7.1 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain NACHT PF05729.7 AJA92801.1 - 0.025 14.2 0.2 2.3 7.8 0.1 2.5 1 1 1 2 2 2 0 NACHT domain Shikimate_dh_N PF08501.6 AJA92801.1 - 0.027 14.5 0.0 0.11 12.5 0.0 2.1 2 0 0 2 2 1 0 Shikimate dehydrogenase substrate binding domain T2SE PF00437.15 AJA92801.1 - 0.028 13.3 0.0 0.058 12.2 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.1 AJA92801.1 - 0.039 14.2 0.8 0.38 11.0 0.1 2.4 2 1 0 2 2 2 0 AAA domain AAA_31 PF13614.1 AJA92801.1 - 0.052 13.4 0.3 0.47 10.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.1 AJA92801.1 - 0.054 12.9 0.4 0.22 10.8 0.3 2.0 1 1 0 1 1 1 0 AAA domain DUF258 PF03193.11 AJA92801.1 - 0.06 12.5 0.0 0.18 10.9 0.0 1.8 2 0 0 2 2 1 0 Protein of unknown function, DUF258 SpoOE-like PF09388.5 AJA92801.1 - 0.066 12.7 0.1 0.52 9.8 0.0 2.4 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein AAA_30 PF13604.1 AJA92801.1 - 0.24 10.9 2.3 4.5 6.7 1.0 2.7 1 1 0 1 1 1 0 AAA domain Inositol_P PF00459.20 AJA92802.1 - 8.4e-51 172.8 0.2 1.1e-50 172.4 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family Snf7 PF03357.16 AJA92803.1 - 0.00011 21.6 8.4 0.0002 20.7 5.9 1.4 1 1 0 1 1 1 1 Snf7 YkyA PF10368.4 AJA92803.1 - 0.032 13.5 0.1 0.056 12.7 0.1 1.4 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF3958 PF13125.1 AJA92803.1 - 0.072 12.9 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) NPV_P10 PF05531.7 AJA92803.1 - 0.22 11.7 6.3 6.1 7.1 1.5 3.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Spc24 PF08286.6 AJA92803.1 - 0.41 10.3 4.1 0.31 10.7 0.6 2.2 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 YlqD PF11068.3 AJA92803.1 - 0.8 9.7 5.5 2.8 7.9 2.4 2.2 2 0 0 2 2 2 0 YlqD protein Flagellin_C PF00700.16 AJA92803.1 - 0.97 9.6 7.6 1.5 8.9 1.1 2.6 2 1 0 2 2 2 0 Bacterial flagellin C-terminal helical region OmpH PF03938.9 AJA92803.1 - 1 9.3 8.2 3.2 7.6 2.4 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) AIRS_C PF02769.17 AJA92804.1 - 5.2e-47 159.6 0.2 2.9e-23 82.5 0.1 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 AJA92804.1 - 2.2e-39 133.5 0.8 2e-21 76.0 0.3 2.5 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain TPP_enzyme_M PF00205.17 AJA92804.1 - 0.032 13.9 0.0 0.71 9.6 0.0 2.7 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, central domain Polyketide_cyc PF03364.15 AJA92805.1 - 5e-06 26.5 0.0 6.4e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.4 AJA92805.1 - 4.5e-05 23.6 0.0 5.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport CaM_bdg_C0 PF10562.4 AJA92806.1 - 0.052 13.4 0.1 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit DUF1272 PF06906.6 AJA92806.1 - 0.098 12.5 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Vps39_2 PF10367.4 AJA92806.1 - 0.17 12.0 0.5 0.21 11.7 0.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Enolase_C PF00113.17 AJA92807.1 - 6.3e-58 196.0 1.0 9.4e-58 195.5 0.7 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 AJA92807.1 - 8.9e-25 87.1 0.9 1.5e-24 86.4 0.1 1.8 2 0 0 2 2 2 1 Enolase, N-terminal domain CW_binding_2 PF04122.7 AJA92807.1 - 0.00016 21.8 0.9 0.00044 20.3 0.3 2.0 2 0 0 2 2 2 1 Putative cell wall binding repeat 2 tRNA-synt_1 PF00133.17 AJA92809.1 - 9e-109 364.1 0.1 5e-108 361.6 0.1 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 AJA92809.1 - 3.9e-32 111.1 3.3 5.3e-32 110.6 0.7 2.2 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 AJA92809.1 - 1.2e-23 83.4 9.5 3e-14 52.4 0.0 4.0 3 1 2 5 5 5 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 AJA92809.1 - 0.00073 18.8 0.0 0.062 12.5 0.0 2.9 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 Ferritin PF00210.19 AJA92810.1 - 1.8e-29 102.3 1.6 2.1e-29 102.1 1.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 AJA92810.1 - 0.00098 19.4 1.0 0.0018 18.5 0.7 1.5 1 1 0 1 1 1 1 Rubrerythrin FANCI_S4 PF14678.1 AJA92810.1 - 0.037 13.1 0.2 0.064 12.3 0.1 1.4 1 1 0 1 1 1 0 FANCI solenoid 4 Pribosyltran_N PF13793.1 AJA92813.1 - 5.9e-25 87.2 0.3 7.1e-24 83.7 0.0 2.4 2 1 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.1 AJA92813.1 - 4.3e-14 52.6 6.6 1.2e-13 51.2 1.1 2.9 1 1 1 3 3 3 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.22 AJA92813.1 - 1.3e-12 47.5 0.2 1.3e-12 47.5 0.2 2.4 3 0 0 3 3 3 1 Phosphoribosyl transferase domain UPRTase PF14681.1 AJA92813.1 - 1.2e-05 24.6 0.0 2.2e-05 23.7 0.0 1.4 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 AJA92813.1 - 0.0032 16.7 0.1 0.0056 15.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase Asp_Glu_race PF01177.17 AJA92813.1 - 0.0088 15.9 0.1 0.015 15.2 0.1 1.5 1 1 0 1 1 1 1 Asp/Glu/Hydantoin racemase PduV-EutP PF10662.4 AJA92813.1 - 0.051 13.0 0.3 3 7.3 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Flavodoxin_1 PF00258.20 AJA92813.1 - 0.1 12.6 0.0 0.22 11.5 0.0 1.7 1 1 0 1 1 1 0 Flavodoxin Thiolase_C PF02803.13 AJA92814.1 - 2.6e-11 42.9 1.1 9.3e-11 41.2 0.1 2.4 2 2 1 3 3 3 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 AJA92814.1 - 2.8e-06 26.5 0.0 9.7e-06 24.7 0.0 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 AJA92814.1 - 0.00073 19.0 0.9 0.066 12.6 0.3 2.7 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 AJA92814.1 - 0.0044 16.6 0.0 0.3 10.7 0.0 2.6 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.17 AJA92814.1 - 0.093 12.5 1.0 0.81 9.5 0.5 2.6 2 1 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain SUI1 PF01253.17 AJA92815.1 - 8.8e-22 76.7 0.4 1.1e-21 76.4 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 PG_binding_2 PF08823.6 AJA92815.1 - 0.056 13.5 0.1 0.16 12.0 0.0 1.7 2 0 0 2 2 2 0 Putative peptidoglycan binding domain BNR_2 PF13088.1 AJA92816.1 - 2e-13 50.2 0.5 2.2e-12 46.8 0.3 2.3 1 1 0 1 1 1 1 BNR repeat-like domain BNR PF02012.15 AJA92816.1 - 0.12 12.2 21.5 0.12 12.2 0.0 6.3 7 0 0 7 7 7 0 BNR/Asp-box repeat zf-C4pol PF14260.1 AJA92817.1 - 0.0001 22.2 9.2 0.049 13.6 1.1 3.2 2 1 0 2 2 2 2 C4-type zinc-finger of DNA polymerase delta Ribosomal_S14 PF00253.16 AJA92817.1 - 0.0021 17.3 3.2 0.4 10.1 0.5 3.4 2 1 1 3 3 3 2 Ribosomal protein S14p/S29e zf-CHY PF05495.7 AJA92817.1 - 0.035 14.2 22.0 1.7 8.8 5.9 3.4 2 2 0 3 3 3 0 CHY zinc finger DUF2180 PF09947.4 AJA92817.1 - 0.12 12.1 12.3 29 4.4 5.6 4.1 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2180) zf-C3HC4_3 PF13920.1 AJA92817.1 - 0.15 11.7 16.6 5.4 6.7 0.6 4.2 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) FYVE PF01363.16 AJA92817.1 - 0.18 11.7 16.6 8.2 6.4 1.3 2.9 1 1 1 2 2 2 0 FYVE zinc finger zf-RING_5 PF14634.1 AJA92817.1 - 0.98 9.1 19.3 2.3 8.0 0.9 3.9 4 0 0 4 4 4 0 zinc-RING finger domain Cytochrome_C7 PF14522.1 AJA92817.1 - 1.8 8.2 17.3 2.4 7.8 2.1 3.0 1 1 2 3 3 3 0 Cytochrome c7 zf-C2H2_jaz PF12171.3 AJA92817.1 - 3.8 7.7 10.7 15 5.9 0.1 3.8 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding Radical_SAM PF04055.16 AJA92819.1 - 2.7e-17 63.4 0.1 5.2e-17 62.5 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily DUF1007 PF06226.8 AJA92820.1 - 0.054 13.2 0.7 0.056 13.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1007) Aminotran_3 PF00202.16 AJA92821.1 - 6.2e-84 281.7 0.1 7.2e-84 281.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.16 AJA92821.1 - 9.7e-05 21.6 0.0 0.00024 20.3 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Inositol_P PF00459.20 AJA92823.1 - 3.4e-30 105.2 0.0 4.1e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 AJA92823.1 - 5.1e-05 22.2 0.0 0.00011 21.1 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase RNA_pol_Rpb1_5 PF04998.12 AJA92825.1 - 1.7e-85 286.6 2.0 3.1e-85 285.8 1.4 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.7 AJA92825.1 - 9.5e-84 281.5 0.1 2.3e-82 276.9 0.1 2.4 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 AJA92825.1 - 7.8e-69 230.8 0.0 1.9e-68 229.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.13 AJA92825.1 - 1.1e-33 116.2 0.1 3e-33 114.7 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.12 AJA92825.1 - 7.5e-24 83.5 0.1 7.5e-24 83.5 0.1 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 Peptidase_C34 PF05413.6 AJA92825.1 - 0.0039 17.2 0.3 0.52 10.4 0.1 3.3 4 0 0 4 4 4 1 Putative closterovirus papain-like endopeptidase MAS20 PF02064.10 AJA92826.1 - 0.0098 15.8 0.6 0.0098 15.8 0.4 2.5 2 1 1 3 3 3 1 MAS20 protein import receptor KID PF02524.9 AJA92826.1 - 0.46 10.7 3.0 1.7 9.0 0.3 3.5 3 0 0 3 3 3 0 KID repeat Adenylsucc_synt PF00709.16 AJA92827.1 - 3.8e-85 286.0 0.5 1.6e-40 139.0 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase YtxH PF12732.2 AJA92828.1 - 0.51 10.7 2.7 0.52 10.7 1.8 1.1 1 0 0 1 1 1 0 YtxH-like protein GFO_IDH_MocA PF01408.17 AJA92829.1 - 3.6e-27 95.2 0.0 6.3e-27 94.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 AJA92829.1 - 1.5e-08 34.4 0.0 2.7e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Shikimate_DH PF01488.15 AJA92829.1 - 0.00053 20.0 0.0 0.0011 19.0 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Semialdhyde_dh PF01118.19 AJA92829.1 - 0.0027 17.9 0.0 0.0052 17.0 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 AJA92829.1 - 0.052 13.9 0.0 0.16 12.4 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 AJA92829.1 - 0.055 12.6 0.0 0.085 12.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 AJA92829.1 - 0.062 13.1 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 AJA92829.1 - 0.11 11.9 0.1 0.7 9.2 0.1 2.1 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TylF PF05711.6 AJA92830.1 - 2.7e-20 72.5 0.0 3.5e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) Methyltransf_24 PF13578.1 AJA92830.1 - 1.3e-09 38.7 0.0 1.8e-09 38.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DS PF01916.12 AJA92831.1 - 3.8e-59 200.2 0.0 4.5e-59 200.0 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Capsule_synth PF05159.9 AJA92832.1 - 2.1e-08 33.9 0.6 2.1e-08 33.9 0.4 2.2 2 1 1 3 3 3 1 Capsule polysaccharide biosynthesis protein ALAD PF00490.16 AJA92834.1 - 2.8e-138 460.2 0.5 3.2e-138 460.0 0.3 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase FtsJ PF01728.14 AJA92835.1 - 3.4e-51 173.7 0.0 3.9e-51 173.5 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.1 AJA92835.1 - 0.00014 21.4 0.3 0.0083 15.7 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92835.1 - 0.0011 18.7 0.0 0.0024 17.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 AJA92835.1 - 0.0015 17.9 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.2 AJA92835.1 - 0.0022 18.5 0.2 0.044 14.3 0.1 2.5 1 1 1 2 2 2 1 Methyltransferase domain NSP13 PF06460.7 AJA92835.1 - 0.0041 16.0 0.3 0.0057 15.5 0.2 1.2 1 0 0 1 1 1 1 Coronavirus NSP13 Radical_SAM PF04055.16 AJA92836.1 - 2.2e-15 57.2 0.2 6.5e-15 55.6 0.1 1.8 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 AJA92836.1 - 2.7e-05 24.1 0.0 9.5e-05 22.4 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 AJA92836.1 - 0.00072 19.6 0.1 0.0013 18.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peptidase_C71 PF12386.3 AJA92836.1 - 0.023 14.1 0.1 0.95 8.8 0.0 2.9 2 1 0 2 2 2 0 Pseudomurein endo-isopeptidase Pei Rpr2 PF04032.11 AJA92837.1 - 5.1e-18 64.7 0.7 6.1e-18 64.4 0.5 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain C1_1 PF00130.17 AJA92837.1 - 0.0085 15.8 0.6 0.013 15.1 0.4 1.3 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) PRESAN PF09687.5 AJA92837.1 - 0.064 13.3 0.3 0.1 12.6 0.2 1.3 1 0 0 1 1 1 0 Plasmodium RESA N-terminal SBDS_C PF09377.5 AJA92837.1 - 0.12 12.0 0.2 0.18 11.4 0.0 1.4 2 0 0 2 2 2 0 SBDS protein C-terminal domain zinc_ribbon_4 PF13717.1 AJA92837.1 - 0.19 11.4 2.8 7 6.4 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 AJA92837.1 - 0.31 10.6 2.8 7.7 6.1 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-C4_ClpX PF06689.8 AJA92837.1 - 1.9 8.0 5.4 1.2 8.6 0.1 2.5 3 0 0 3 3 3 0 ClpX C4-type zinc finger DUF21 PF01595.15 AJA92838.1 - 1.4e-52 177.6 0.2 2e-52 177.1 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF21 CBS PF00571.23 AJA92838.1 - 7.6e-20 70.4 0.1 8.8e-10 38.2 0.1 2.6 2 0 0 2 2 2 2 CBS domain CorC_HlyC PF03471.12 AJA92838.1 - 4e-18 64.9 1.5 1e-17 63.6 0.2 2.1 1 1 1 2 2 2 1 Transporter associated domain DUF2889 PF11136.3 AJA92838.1 - 0.1 12.8 0.1 0.97 9.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2889) Ribosomal_L18e PF00828.14 AJA92839.1 - 2.9e-18 66.4 0.2 3.9e-18 66.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 OmpH PF03938.9 AJA92840.1 - 0.8 9.6 14.2 2.7 7.9 8.4 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) PLRV_ORF5 PF01690.12 AJA92840.1 - 1 8.4 7.6 1 8.4 5.3 1.2 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein HisKA_3 PF07730.8 AJA92840.1 - 1.1 9.6 4.0 36 4.8 0.0 2.6 2 1 0 2 2 2 0 Histidine kinase IncA PF04156.9 AJA92840.1 - 1.4 8.5 9.0 1.8 8.1 0.1 2.1 2 0 0 2 2 2 0 IncA protein Vps53_N PF04100.7 AJA92840.1 - 3.1 6.4 6.4 44 2.6 4.7 2.1 2 0 0 2 2 2 0 Vps53-like, N-terminal FbpA PF05833.6 AJA92840.1 - 3.5 6.0 17.4 0.68 8.4 0.0 2.1 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) DUF3892 PF13031.1 AJA92841.1 - 0.0014 19.0 0.2 0.0014 19.0 0.1 3.4 4 0 0 4 4 4 1 Protein of unknown function (DUF3892) DUF3816 PF12822.2 AJA92843.1 - 0.0061 16.4 3.7 0.0064 16.4 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3816) DUF4010 PF13194.1 AJA92843.1 - 0.05 12.9 0.1 0.05 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) DUF4271 PF14093.1 AJA92843.1 - 0.099 12.3 0.7 0.099 12.3 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Amidase PF01425.16 AJA92844.1 - 9.4e-132 439.9 0.0 1.1e-131 439.8 0.0 1.0 1 0 0 1 1 1 1 Amidase Senescence PF06911.7 AJA92844.1 - 0.13 11.9 0.5 5.9 6.5 0.0 2.5 2 1 0 2 2 2 0 Senescence-associated protein RrnaAD PF00398.15 AJA92846.1 - 3.3e-41 141.0 1.6 3.8e-41 140.8 1.1 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 AJA92846.1 - 5.9e-06 25.9 0.0 1.7e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 AJA92846.1 - 0.0039 17.1 0.0 0.0055 16.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92846.1 - 0.0051 17.3 0.0 0.0085 16.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 AJA92846.1 - 0.0088 15.1 0.1 0.019 14.0 0.1 1.5 1 0 0 1 1 1 1 Putative methyltransferase Recep_L_domain PF01030.19 AJA92846.1 - 0.046 13.6 0.2 0.046 13.6 0.2 1.6 2 0 0 2 2 2 0 Receptor L domain Methyltransf_23 PF13489.1 AJA92846.1 - 0.064 12.9 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain BPL_N PF09825.4 AJA92846.1 - 0.09 11.5 0.3 0.49 9.1 0.1 1.9 2 0 0 2 2 2 0 Biotin-protein ligase, N terminal CTP_synth_N PF06418.9 AJA92847.1 - 7.2e-122 405.7 0.4 9.4e-122 405.3 0.3 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 AJA92847.1 - 1.6e-47 161.4 0.0 3.1e-47 160.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 AJA92847.1 - 4.4e-12 45.9 0.0 1.1e-11 44.6 0.0 1.6 2 0 0 2 2 2 1 Peptidase C26 CbiA PF01656.18 AJA92847.1 - 3.6e-05 23.2 0.0 6.6e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF600 PF04634.7 AJA92847.1 - 0.037 14.0 0.1 0.094 12.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function, DUF600 Polysacc_synt_2 PF02719.10 AJA92848.1 - 2.6e-97 325.2 0.1 3.3e-97 324.9 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.16 AJA92848.1 - 4e-27 95.1 0.0 7.5e-26 91.0 0.0 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 AJA92848.1 - 4.4e-22 78.0 0.0 4.2e-19 68.3 0.0 2.2 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA92848.1 - 7.7e-14 51.2 0.0 8.2e-12 44.5 0.0 2.2 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 AJA92848.1 - 2e-10 41.0 0.0 2.5e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_4 PF07993.7 AJA92848.1 - 4.5e-10 38.8 0.1 2.6e-07 29.8 0.0 2.9 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.20 AJA92848.1 - 6.4e-07 29.4 0.0 1e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 AJA92848.1 - 8.2e-06 25.2 0.0 2.7e-05 23.5 0.0 1.8 2 0 0 2 2 2 1 NmrA-like family Shikimate_DH PF01488.15 AJA92848.1 - 0.00019 21.5 0.1 0.00055 20.0 0.0 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 AJA92848.1 - 0.00043 20.6 0.0 0.0021 18.4 0.0 2.2 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent KR PF08659.5 AJA92848.1 - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 KR domain Semialdhyde_dh PF01118.19 AJA92848.1 - 0.0042 17.3 0.0 0.03 14.6 0.0 2.2 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 AJA92848.1 - 0.0094 14.9 0.0 0.015 14.2 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase DUF4309 PF14172.1 AJA92848.1 - 0.024 14.5 0.7 0.1 12.5 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4309) TrkA_N PF02254.13 AJA92848.1 - 0.045 13.7 0.0 0.13 12.2 0.0 1.9 2 1 0 2 2 2 0 TrkA-N domain PMT_2 PF13231.1 AJA92849.1 - 3.4e-16 59.5 17.7 3.4e-16 59.5 12.3 3.2 4 0 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2723 PF11028.3 AJA92849.1 - 0.23 10.9 12.4 0.026 13.9 5.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2723) DnaJ PF00226.26 AJA92850.1 - 1e-20 73.2 1.4 1.6e-20 72.5 0.9 1.3 1 0 0 1 1 1 1 DnaJ domain YvbH_ext PF11724.3 AJA92850.1 - 0.021 14.4 1.0 0.097 12.3 0.4 2.1 1 1 1 2 2 2 0 YvbH-like oligomerisation region TetR_C_8 PF14278.1 AJA92850.1 - 0.11 12.9 0.1 2.1 8.8 0.0 2.7 2 1 1 3 3 3 0 Transcriptional regulator C-terminal region OmpH PF03938.9 AJA92850.1 - 1.3 8.9 4.9 2 8.3 3.4 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) CAP_assoc_N PF14504.1 AJA92851.1 - 0.058 13.1 0.7 0.12 12.1 0.2 1.6 1 1 1 2 2 2 0 CAP-associated N-terminal HAND PF09110.6 AJA92851.1 - 0.11 12.9 0.5 0.14 12.5 0.3 1.3 1 0 0 1 1 1 0 HAND PDT PF00800.13 AJA92852.1 - 4.3e-55 186.0 0.1 8e-55 185.2 0.1 1.4 2 0 0 2 2 2 1 Prephenate dehydratase ACT PF01842.20 AJA92852.1 - 4.1e-05 22.9 0.0 7.7e-05 22.0 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 AJA92852.1 - 0.053 13.8 0.1 0.14 12.4 0.1 1.8 1 0 0 1 1 1 0 ACT domain SAICAR_synt PF01259.13 AJA92853.1 - 2.5e-69 233.1 0.0 2.9e-69 232.9 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase Plectin PF00681.15 AJA92853.1 - 0.025 14.0 0.0 0.25 10.9 0.0 2.4 2 0 0 2 2 2 0 Plectin repeat HMG_CoA_synt_C PF08540.5 AJA92854.1 - 1.2e-33 116.8 1.2 2.5e-33 115.7 0.8 1.5 1 1 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.12 AJA92854.1 - 6.3e-28 97.4 0.1 1.1e-27 96.7 0.1 1.4 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Ribosomal_S14 PF00253.16 AJA92855.1 - 8.2e-11 41.1 6.1 1.4e-10 40.4 4.2 1.5 1 1 0 1 1 1 1 Ribosomal protein S14p/S29e DZR PF12773.2 AJA92855.1 - 0.03 14.1 0.8 0.038 13.8 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon NikR_C PF08753.6 AJA92856.1 - 5.9e-13 48.5 0.8 8.9e-13 47.9 0.6 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 AJA92856.1 - 0.00053 19.7 0.0 0.00085 19.1 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF1387 PF07139.6 AJA92856.1 - 0.067 12.7 0.1 0.093 12.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1387) DUF2191 PF09957.4 AJA92856.1 - 0.13 12.0 0.0 0.36 10.6 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2191) Ribosomal_S11 PF00411.14 AJA92857.1 - 5.2e-38 129.6 1.0 7.4e-38 129.1 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 DUF3898 PF13037.1 AJA92857.1 - 0.0024 17.7 0.1 0.0033 17.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3898) Tagatose_6_P_K PF08013.6 AJA92857.1 - 0.095 11.1 0.1 0.12 10.7 0.0 1.4 1 1 0 1 1 1 0 Tagatose 6 phosphate kinase DivIVA PF05103.8 AJA92858.1 - 0.0059 16.6 7.4 0.0077 16.2 5.1 1.2 1 0 0 1 1 1 1 DivIVA protein Muted PF14942.1 AJA92858.1 - 0.014 15.3 3.7 0.017 14.9 2.6 1.1 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Mitofilin PF09731.4 AJA92858.1 - 0.017 13.8 7.7 0.019 13.6 5.3 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Spore_III_AB PF09548.5 AJA92858.1 - 0.017 14.9 3.3 0.03 14.0 2.3 1.4 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DUF883 PF05957.8 AJA92858.1 - 0.023 15.1 5.2 0.052 13.9 1.3 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) HAUS2 PF15003.1 AJA92858.1 - 0.031 13.3 1.1 0.034 13.2 0.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 2 DUF972 PF06156.8 AJA92858.1 - 0.032 14.5 4.8 0.043 14.1 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF972) DUF948 PF06103.6 AJA92858.1 - 0.034 13.9 5.4 0.13 12.1 0.4 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Mnd1 PF03962.10 AJA92858.1 - 0.051 13.2 5.7 0.062 12.9 3.9 1.0 1 0 0 1 1 1 0 Mnd1 family OmpH PF03938.9 AJA92858.1 - 0.057 13.3 4.5 0.063 13.2 3.1 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1395 PF07160.7 AJA92858.1 - 0.065 12.7 5.4 0.079 12.4 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1395) ATP-synt_B PF00430.13 AJA92858.1 - 0.08 12.7 11.2 0.15 11.8 7.8 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) RmuC PF02646.11 AJA92858.1 - 0.081 11.7 5.1 0.078 11.8 2.8 1.5 1 1 0 1 1 1 0 RmuC family Spc24 PF08286.6 AJA92858.1 - 0.11 12.1 8.5 0.63 9.7 5.9 1.9 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 CsoSCA PF08936.5 AJA92858.1 - 0.12 10.7 0.8 0.14 10.5 0.5 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase Baculo_PEP_C PF04513.7 AJA92858.1 - 0.14 11.9 5.3 0.26 11.1 0.9 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MitMem_reg PF13012.1 AJA92858.1 - 0.19 11.8 4.9 0.37 10.8 3.4 1.5 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Reo_sigmaC PF04582.7 AJA92858.1 - 0.19 10.8 8.4 0.22 10.6 5.8 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein DUF3154 PF11351.3 AJA92858.1 - 0.25 11.1 1.1 0.44 10.2 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3154) Phasin PF05597.6 AJA92858.1 - 0.25 11.1 6.6 0.32 10.7 3.0 1.9 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) V-ATPase_G PF03179.10 AJA92858.1 - 0.26 11.5 8.4 0.48 10.7 5.2 1.7 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF342 PF03961.8 AJA92858.1 - 0.28 9.5 6.2 0.31 9.3 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) Het-C PF07217.6 AJA92858.1 - 0.28 9.3 5.2 0.31 9.1 3.6 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C FlaC_arch PF05377.6 AJA92858.1 - 0.37 10.7 7.1 0.13 12.2 2.0 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) CENP-Q PF13094.1 AJA92858.1 - 0.42 10.6 7.0 0.62 10.0 4.9 1.4 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit HR1 PF02185.11 AJA92858.1 - 0.47 10.2 12.8 6.7 6.5 0.5 3.0 1 1 1 2 2 2 0 Hr1 repeat Prominin PF05478.6 AJA92858.1 - 0.58 7.6 6.0 0.69 7.3 4.2 1.2 1 0 0 1 1 1 0 Prominin Sox_N PF12444.3 AJA92858.1 - 0.77 10.9 6.6 1.3 10.2 4.6 1.6 1 1 0 1 1 1 0 Sox developmental protein N terminal RP-C_C PF11800.3 AJA92858.1 - 1.1 8.9 5.2 1.1 8.9 3.6 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Prefoldin_2 PF01920.15 AJA92858.1 - 1.1 9.0 9.1 2.8 7.7 6.3 1.6 1 1 0 1 1 1 0 Prefoldin subunit cwf21 PF08312.7 AJA92858.1 - 1.2 9.0 3.7 1.6 8.6 0.3 2.2 2 0 0 2 2 2 0 cwf21 domain DUF4163 PF13739.1 AJA92858.1 - 1.3 9.8 5.4 4.2 8.2 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4163) COG5 PF10392.4 AJA92858.1 - 2.4 8.1 7.5 17 5.3 5.2 1.9 1 1 0 1 1 1 0 Golgi transport complex subunit 5 UPF0270 PF06794.7 AJA92859.1 - 0.08 12.7 0.4 0.19 11.4 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0270) Rifin_STEVOR PF02009.11 AJA92859.1 - 0.082 12.5 1.4 0.13 11.8 0.6 1.6 1 1 1 2 2 2 0 Rifin/stevor family CTV_P13 PF06922.6 AJA92860.1 - 0.078 12.8 0.1 0.094 12.5 0.1 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein DUF915 PF06028.6 AJA92861.1 - 0.0034 16.5 0.0 0.0057 15.7 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) CbiA PF01656.18 AJA92862.1 - 6.1e-25 87.7 0.0 7.9e-25 87.3 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 AJA92862.1 - 1.4e-18 67.2 0.0 6.6e-18 65.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain SelA PF03841.8 AJA92862.1 - 0.0019 17.0 0.1 0.0027 16.5 0.0 1.1 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase MobB PF03205.9 AJA92862.1 - 0.025 14.2 0.0 0.31 10.7 0.0 2.3 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B TPR_1 PF00515.23 AJA92863.1 - 3.2e-17 61.3 7.2 1e-06 28.0 0.0 4.9 5 1 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92863.1 - 7.9e-17 60.6 3.5 1.8e-09 37.1 0.0 2.4 3 0 0 3 3 3 2 TPR repeat TPR_12 PF13424.1 AJA92863.1 - 4.8e-15 55.2 0.7 1.7e-08 34.2 0.0 3.3 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92863.1 - 9.7e-13 46.9 4.8 0.0038 17.0 0.0 4.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92863.1 - 1.7e-10 41.2 0.0 3.3e-05 24.4 0.0 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92863.1 - 1.2e-09 37.2 8.5 0.0019 17.8 0.0 4.5 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92863.1 - 4.3e-09 35.8 0.8 0.081 13.1 0.0 4.5 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92863.1 - 6.2e-08 32.6 0.0 2.3 9.1 0.0 4.2 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92863.1 - 1.1e-07 32.0 3.2 0.00051 20.3 0.7 3.4 1 1 1 3 3 3 2 Tetratricopeptide repeat Apc3 PF12895.2 AJA92863.1 - 2e-07 31.0 0.7 3.3e-06 27.1 0.1 2.2 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 AJA92863.1 - 1e-06 28.0 1.7 0.67 9.9 0.1 4.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92863.1 - 6.7e-05 23.0 1.6 13 6.4 0.1 4.5 4 1 1 5 5 5 0 Tetratricopeptide repeat MIT PF04212.13 AJA92863.1 - 7.3e-05 22.5 6.8 0.87 9.5 0.0 3.8 2 1 1 4 4 4 2 MIT (microtubule interacting and transport) domain TPR_9 PF13371.1 AJA92863.1 - 0.00061 19.5 0.0 0.56 10.1 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 AJA92863.1 - 0.0023 18.1 0.2 0.0093 16.1 0.1 1.8 2 0 0 2 2 2 1 Alkyl sulfatase dimerisation NARP1 PF12569.3 AJA92863.1 - 0.0026 16.6 0.3 0.41 9.3 0.0 2.1 2 0 0 2 2 2 2 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.1 AJA92863.1 - 0.048 13.5 0.6 25 4.8 0.0 3.6 4 0 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat 4HB_MCP_1 PF12729.2 AJA92863.1 - 0.11 11.8 3.3 0.21 10.9 0.3 2.4 2 1 1 3 3 3 0 Four helix bundle sensory module for signal transduction Glyco_transf_25 PF01755.12 AJA92863.1 - 0.12 11.9 0.7 0.16 11.5 0.1 1.5 2 0 0 2 2 2 0 Glycosyltransferase family 25 (LPS biosynthesis protein) SHNi-TPR PF10516.4 AJA92863.1 - 1.1 8.5 0.0 1.1 8.5 0.0 3.4 4 0 0 4 4 4 0 SHNi-TPR Acetyltransf_10 PF13673.1 AJA92864.1 - 2e-06 27.8 0.0 4.8e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain NIF PF03031.13 AJA92864.1 - 3.4e-05 23.5 0.1 7.7e-05 22.4 0.1 1.7 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Acid_PPase PF12689.2 AJA92864.1 - 9.6e-05 22.0 0.6 9.6e-05 22.0 0.4 2.5 2 1 0 2 2 2 1 Acid Phosphatase Acetyltransf_1 PF00583.19 AJA92864.1 - 0.00041 20.3 0.0 0.00077 19.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.1 AJA92864.1 - 0.0015 18.5 0.1 0.0059 16.5 0.1 2.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 AJA92864.1 - 0.0081 15.8 0.0 0.018 14.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.1 AJA92864.1 - 0.022 14.8 0.0 0.059 13.5 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 AJA92864.1 - 0.047 13.5 0.0 0.093 12.6 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MAF_flag10 PF01973.13 AJA92865.1 - 3.3e-38 130.8 0.6 4.5e-38 130.4 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.11 AJA92865.1 - 0.038 13.5 0.0 2.1 7.9 0.0 2.3 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, catalytic domain Guanylin PF02058.10 AJA92865.1 - 0.039 14.0 0.0 3.4 7.8 0.0 2.3 2 0 0 2 2 2 0 Guanylin precursor THF_DHG_CYH_C PF02882.14 AJA92865.1 - 0.091 11.8 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tox-URI2 PF15653.1 AJA92865.1 - 0.11 12.6 0.1 0.11 12.6 0.1 2.9 3 1 0 3 3 3 0 URI fold toxin 2 TPR_1 PF00515.23 AJA92866.1 - 6.4e-18 63.5 0.3 1.5e-11 43.3 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92866.1 - 1.7e-16 58.7 0.1 1.6e-09 36.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.1 AJA92866.1 - 2.1e-16 59.2 0.1 2.3e-16 59.1 0.1 1.1 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.1 AJA92866.1 - 1.8e-12 46.1 0.4 9e-08 31.3 0.1 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92866.1 - 1e-10 40.9 0.3 1.9e-07 30.7 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92866.1 - 3.1e-10 40.2 0.0 3.7e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.1 AJA92866.1 - 6.8e-10 38.6 0.1 8.5e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92866.1 - 1.8e-09 37.3 0.0 2.8e-09 36.7 0.0 1.3 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92866.1 - 2.3e-08 34.4 0.0 2.6e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.1 AJA92866.1 - 4.1e-08 32.4 0.1 0.0088 15.7 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92866.1 - 2e-07 31.0 0.1 0.0091 16.5 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.1 AJA92866.1 - 3.3e-05 23.6 0.1 0.018 14.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat NARP1 PF12569.3 AJA92866.1 - 0.00076 18.3 0.0 0.0009 18.1 0.0 1.0 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 MIT PF04212.13 AJA92866.1 - 0.013 15.3 0.0 3.9 7.4 0.1 2.1 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain DUF3856 PF12968.2 AJA92866.1 - 0.013 15.3 0.0 0.028 14.2 0.0 1.5 1 1 1 2 2 2 0 Domain of Unknown Function (DUF3856) Apc3 PF12895.2 AJA92866.1 - 0.014 15.5 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Coatomer_E PF04733.9 AJA92866.1 - 0.014 14.5 0.0 0.019 14.2 0.0 1.2 1 0 0 1 1 1 0 Coatomer epsilon subunit SHNi-TPR PF10516.4 AJA92866.1 - 0.024 13.8 1.6 0.97 8.7 0.4 2.5 2 1 0 2 2 2 0 SHNi-TPR Fis1_TPR_C PF14853.1 AJA92866.1 - 0.035 13.9 0.2 5.7 6.8 0.0 2.6 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat PHO4 PF01384.15 AJA92867.1 - 6.6e-88 294.4 32.6 7.9e-88 294.2 22.6 1.1 1 0 0 1 1 1 1 Phosphate transporter family Lum_binding PF00677.12 AJA92868.1 - 1.6e-44 149.6 11.0 1e-25 89.4 0.7 2.0 2 0 0 2 2 2 2 Lumazine binding domain DUF4354 PF14263.1 AJA92868.1 - 0.51 10.0 3.5 6.5 6.4 0.2 3.0 2 2 0 2 2 2 0 Domain of unknown function (DUF4354) GGDN PF05165.7 AJA92869.1 - 1.3e-51 174.9 0.0 1.6e-51 174.7 0.0 1.0 1 0 0 1 1 1 1 GGDN family Guanylate_cyc PF00211.15 AJA92869.1 - 0.0086 15.4 0.6 0.014 14.7 0.1 1.7 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain Peptidase_M32 PF02074.10 AJA92869.1 - 0.019 13.6 0.0 0.025 13.2 0.0 1.2 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase IMS PF00817.15 AJA92869.1 - 0.093 12.5 0.0 0.7 9.6 0.0 2.1 1 1 0 1 1 1 0 impB/mucB/samB family NOG1 PF06858.9 AJA92869.1 - 0.14 12.0 1.1 0.62 9.9 0.1 2.5 3 0 0 3 3 3 0 Nucleolar GTP-binding protein 1 (NOG1) Proteasome PF00227.21 AJA92870.1 - 3.8e-52 176.3 0.5 4.9e-52 175.9 0.4 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 AJA92870.1 - 6.3e-14 50.9 0.2 6.3e-14 50.9 0.1 2.9 4 0 0 4 4 4 1 Proteasome subunit A N-terminal signature adh_short PF00106.20 AJA92871.1 - 4.7e-28 98.1 0.0 6.9e-28 97.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 AJA92871.1 - 7.6e-21 74.9 0.0 9.9e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.5 AJA92871.1 - 3.2e-07 29.8 0.0 2.5e-05 23.5 0.0 2.4 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) KR PF08659.5 AJA92871.1 - 4.3e-07 29.7 0.0 6.5e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 KR domain Pex19 PF04614.7 AJA92871.1 - 0.05 13.2 0.1 0.081 12.5 0.0 1.3 1 0 0 1 1 1 0 Pex19 protein family GvpH PF05455.6 AJA92872.1 - 0.0002 21.0 0.0 0.00025 20.7 0.0 1.2 1 0 0 1 1 1 1 GvpH RseC_MucC PF04246.7 AJA92872.1 - 0.078 12.5 0.5 0.13 11.8 0.4 1.3 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC UL2 PF08196.6 AJA92872.1 - 0.42 10.3 2.5 0.73 9.6 1.1 1.8 2 0 0 2 2 2 0 UL2 protein Ribosomal_L22 PF00237.14 AJA92873.1 - 1.2e-27 95.9 0.3 1.4e-27 95.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e RelB PF04221.7 AJA92873.1 - 0.075 12.7 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 RelB antitoxin Fer4_14 PF13394.1 AJA92874.1 - 5.8e-18 65.0 1.7 7.5e-18 64.6 0.1 1.8 1 1 1 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 AJA92874.1 - 8e-14 52.1 0.0 1.5e-13 51.2 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 AJA92874.1 - 3.3e-13 49.9 1.2 1.4e-12 47.8 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain Lipocalin_4 PF13648.1 AJA92874.1 - 0.0063 17.1 1.1 0.0063 17.1 0.7 2.0 2 0 0 2 2 2 1 Lipocalin-like domain Latrotoxin_C PF15658.1 AJA92874.1 - 0.014 15.2 0.2 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Latrotoxin C-terminal domain DUF385 PF04075.9 AJA92875.1 - 2.2e-11 43.8 0.0 2.8e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF385) DUF2255 PF10012.4 AJA92875.1 - 0.0062 16.4 0.1 0.0074 16.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2255) AhpC-TSA PF00578.16 AJA92876.1 - 4.6e-27 94.1 0.4 5.7e-27 93.8 0.3 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92876.1 - 3.3e-13 49.4 0.3 4.1e-13 49.1 0.2 1.1 1 0 0 1 1 1 1 Redoxin PcfK PF14058.1 AJA92877.1 - 0.004 17.3 0.4 0.0044 17.1 0.3 1.1 1 0 0 1 1 1 1 PcfK-like protein DUF1977 PF09320.6 AJA92877.1 - 0.031 14.5 0.2 0.036 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1977) ELFV_dehydrog PF00208.16 AJA92878.1 - 2e-64 217.5 0.7 3e-64 216.9 0.5 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 AJA92878.1 - 1.9e-45 153.6 0.0 3.1e-45 152.9 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FdtA PF05523.6 AJA92880.1 - 5.5e-18 64.7 0.2 6.4e-18 64.5 0.1 1.0 1 0 0 1 1 1 1 WxcM-like, C-terminal Cupin_2 PF07883.6 AJA92880.1 - 0.0046 16.4 0.0 0.0078 15.6 0.0 1.5 1 1 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 AJA92880.1 - 0.016 14.6 0.0 0.024 14.0 0.0 1.3 1 1 0 1 1 1 0 Cupin Methyltransf_31 PF13847.1 AJA92882.1 - 7.4e-22 77.5 0.0 1.8e-21 76.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 AJA92882.1 - 1.2e-20 73.9 0.0 1.6e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92882.1 - 8.5e-17 61.4 0.0 1.7e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 AJA92882.1 - 3.7e-15 56.1 0.0 7.2e-15 55.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92882.1 - 4.3e-15 56.2 0.0 7.2e-15 55.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 AJA92882.1 - 1.1e-10 41.1 0.0 3.1e-10 39.6 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.1 AJA92882.1 - 4.3e-09 36.6 0.0 1.2e-08 35.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 AJA92882.1 - 7.2e-09 34.9 0.0 1.2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.15 AJA92882.1 - 1.1e-08 34.4 0.0 3.2e-08 32.9 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.6 AJA92882.1 - 7e-08 31.5 0.0 1.2e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.7 AJA92882.1 - 1.1e-07 31.4 0.0 6.5e-07 28.9 0.0 1.9 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.9 AJA92882.1 - 1.8e-06 27.2 0.1 4.2e-06 26.0 0.0 1.6 2 0 0 2 2 2 1 Tellurite resistance protein TehB PrmA PF06325.8 AJA92882.1 - 4.9e-06 25.8 0.0 7.2e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.6 AJA92882.1 - 5e-06 26.0 0.0 7.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_26 PF13659.1 AJA92882.1 - 0.00036 20.5 0.0 0.00078 19.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.13 AJA92882.1 - 0.00078 18.7 0.0 0.0012 18.0 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_32 PF13679.1 AJA92882.1 - 0.00085 19.0 0.0 0.0013 18.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 AJA92882.1 - 0.0013 17.9 0.1 0.0033 16.5 0.1 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.12 AJA92882.1 - 0.0061 15.6 0.0 0.025 13.6 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase TPMT PF05724.6 AJA92882.1 - 0.0076 15.7 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) PCMT PF01135.14 AJA92882.1 - 0.013 15.0 0.0 0.021 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AdoMet_MTase PF07757.8 AJA92882.1 - 0.014 15.5 0.0 0.032 14.3 0.0 1.7 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Methyltransf_8 PF05148.10 AJA92882.1 - 0.049 13.2 0.0 0.096 12.3 0.0 1.5 1 0 0 1 1 1 0 Hypothetical methyltransferase CheR PF01739.13 AJA92882.1 - 0.059 12.6 0.0 11 5.2 0.0 2.3 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain N2227 PF07942.7 AJA92882.1 - 0.064 12.2 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 N2227-like protein FtsJ PF01728.14 AJA92882.1 - 0.068 13.1 0.0 0.081 12.9 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase FmrO PF07091.6 AJA92882.1 - 0.1 11.5 0.0 0.19 10.6 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) POR PF01558.13 AJA92882.1 - 0.11 12.3 0.0 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 Pyruvate ferredoxin/flavodoxin oxidoreductase Ada3 PF10198.4 AJA92883.1 - 0.13 11.9 0.6 0.14 11.8 0.4 1.0 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 CorA PF01544.13 AJA92884.1 - 5.9e-28 97.7 5.1 7e-28 97.4 3.5 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF1664 PF07889.7 AJA92884.1 - 0.0084 15.9 1.0 0.099 12.4 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) zf-C3HC4_3 PF13920.1 AJA92885.1 - 0.00078 19.0 1.8 0.0011 18.6 1.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 AJA92885.1 - 0.037 13.7 2.0 0.049 13.3 1.4 1.2 1 0 0 1 1 1 0 zinc-RING finger domain DZR PF12773.2 AJA92885.1 - 0.077 12.8 0.9 0.1 12.4 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_2 PF13923.1 AJA92885.1 - 0.13 12.3 1.6 0.17 11.9 1.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TF_Zn_Ribbon PF08271.7 AJA92885.1 - 0.26 10.6 6.0 1.2 8.4 0.4 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding SOR_SNZ PF01680.12 AJA92886.1 - 3.5e-90 301.1 3.4 4.6e-90 300.7 2.3 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 AJA92886.1 - 1.1e-07 31.2 1.6 6.6e-06 25.3 0.1 2.4 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG His_biosynth PF00977.16 AJA92886.1 - 8.7e-07 28.4 0.6 0.0028 16.9 0.0 3.2 2 1 0 2 2 2 1 Histidine biosynthesis protein IGPS PF00218.16 AJA92886.1 - 0.00022 20.3 0.0 0.0026 16.8 0.0 2.3 3 0 0 3 3 3 1 Indole-3-glycerol phosphate synthase NMO PF03060.10 AJA92886.1 - 0.00097 18.3 5.3 0.026 13.6 0.2 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.12 AJA92886.1 - 0.002 17.0 0.7 0.36 9.6 0.2 2.2 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) NanE PF04131.9 AJA92886.1 - 0.0057 15.6 2.3 0.087 11.7 0.0 3.0 2 2 1 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase PcrB PF01884.12 AJA92886.1 - 0.011 15.0 0.1 0.24 10.6 0.0 2.5 1 1 1 2 2 2 0 PcrB family OMPdecase PF00215.19 AJA92886.1 - 0.041 13.2 0.9 1.2 8.4 0.1 2.6 2 1 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Phos_pyr_kin PF08543.7 AJA92886.1 - 0.046 12.9 0.4 0.075 12.2 0.3 1.3 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Thymidylate_kin PF02223.12 AJA92887.1 - 1.2e-35 122.5 0.1 1.3e-35 122.4 0.1 1.0 1 0 0 1 1 1 1 Thymidylate kinase HPHLAWLY PF14925.1 AJA92887.1 - 0.00028 19.0 0.6 0.094 10.6 0.0 2.2 2 1 0 2 2 2 2 Domain of unknown function SPOB_a PF14689.1 AJA92887.1 - 0.06 12.9 0.0 0.14 11.7 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain tRNA_anti-codon PF01336.20 AJA92888.1 - 6.8e-10 38.6 0.2 0.019 14.7 0.0 3.4 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain PadR PF03551.9 AJA92889.1 - 9.1e-11 41.3 0.0 1.9e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 AJA92889.1 - 1.7e-05 24.5 0.3 5.3e-05 22.9 0.0 2.0 2 1 0 2 2 2 1 Winged helix-turn-helix Mrr_N PF14338.1 AJA92889.1 - 0.0035 17.3 0.1 0.046 13.8 0.0 2.3 2 0 0 2 2 2 1 Mrr N-terminal domain AphA_like PF14557.1 AJA92889.1 - 0.0094 15.5 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Putative AphA-like transcriptional regulator DUF1828 PF08861.5 AJA92889.1 - 0.073 12.7 2.3 0.41 10.3 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF1828 Copper-bind PF00127.15 AJA92890.1 - 7.1e-16 58.2 0.1 1.2e-07 31.8 0.0 2.3 2 0 0 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_3 PF07732.10 AJA92890.1 - 5.9e-13 48.5 0.5 1e-05 25.2 0.0 2.8 2 1 0 2 2 2 2 Multicopper oxidase Cupredoxin_1 PF13473.1 AJA92890.1 - 5.6e-10 39.0 0.0 0.00096 19.0 0.0 2.4 2 0 0 2 2 2 2 Cupredoxin-like domain SoxE PF06525.6 AJA92890.1 - 3.9e-07 29.5 1.1 0.024 13.9 0.0 2.8 2 2 0 2 2 2 2 Sulfocyanin (SoxE) Cu_bind_like PF02298.12 AJA92890.1 - 2e-06 27.5 0.0 0.058 13.1 0.0 2.5 2 1 0 2 2 2 2 Plastocyanin-like domain Cu-oxidase_2 PF07731.9 AJA92890.1 - 2.7e-06 26.9 0.0 0.023 14.2 0.0 2.6 2 1 0 2 2 2 2 Multicopper oxidase COX2 PF00116.15 AJA92890.1 - 0.0024 17.6 0.1 1.7 8.4 0.0 2.8 2 1 0 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain CHU_C PF13585.1 AJA92890.1 - 0.08 12.8 0.2 15 5.5 0.0 2.4 2 0 0 2 2 2 0 C-terminal domain of CHU protein family PPC PF04151.10 AJA92890.1 - 0.58 11.1 7.5 2.2 9.2 0.3 2.9 2 1 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain Glyco_hydro_2 PF00703.16 AJA92891.1 - 0.035 14.5 0.1 0.083 13.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 RPA_C PF08784.6 AJA92891.1 - 0.12 12.7 0.0 2.5 8.5 0.0 2.3 2 0 0 2 2 2 0 Replication protein A C terminal CTP_transf_2 PF01467.21 AJA92893.1 - 6.5e-14 52.2 0.1 1.2e-13 51.4 0.1 1.4 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 AJA92893.1 - 0.0058 16.2 0.2 0.014 14.9 0.1 1.7 1 1 1 2 2 2 1 FAD synthetase Pantoate_ligase PF02569.10 AJA92893.1 - 0.02 13.6 0.3 1 8.0 0.0 2.1 2 0 0 2 2 2 0 Pantoate-beta-alanine ligase Aldo_ket_red PF00248.16 AJA92894.1 - 4.7e-48 163.4 0.0 5.4e-48 163.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF3052 PF11253.3 AJA92894.1 - 0.058 12.9 0.3 0.11 12.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3052) AIRS PF00586.19 AJA92895.1 - 3.7e-11 43.1 0.0 8.2e-11 42.0 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 AJA92895.1 - 0.0018 18.2 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain FAA_hydrolase_N PF09298.6 AJA92895.1 - 0.14 12.2 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal SHMT PF00464.14 AJA92896.1 - 4.1e-75 252.6 0.1 5.6e-75 252.1 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.16 AJA92896.1 - 1e-08 34.7 0.1 1.4e-08 34.2 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 AJA92896.1 - 2.2e-07 30.1 0.0 5.3e-07 28.9 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 AJA92896.1 - 0.00018 20.3 0.3 0.00041 19.2 0.2 1.7 1 1 0 1 1 1 1 Aminotransferase class-V SelA PF03841.8 AJA92896.1 - 0.0002 20.2 0.0 0.0003 19.6 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DUF3469 PF11952.3 AJA92896.1 - 0.11 12.1 0.0 9 6.0 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3469) CaMKII_AD PF08332.5 AJA92897.1 - 6.4e-10 39.0 0.2 1.6e-09 37.7 0.1 1.6 1 1 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II Association SnoaL_3 PF13474.1 AJA92897.1 - 2.4e-09 37.2 0.0 3.5e-09 36.7 0.0 1.2 1 1 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 AJA92897.1 - 2.8e-07 30.7 0.0 3.2e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.2 AJA92897.1 - 1.1e-05 25.7 0.0 1.3e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.15 AJA92897.1 - 0.00071 19.9 0.0 0.00081 19.7 0.0 1.1 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_4 PF13577.1 AJA92897.1 - 0.062 13.2 0.0 1.2 9.0 0.0 2.1 1 1 0 1 1 1 0 SnoaL-like domain Glyco_trans_4_2 PF13477.1 AJA92897.1 - 0.079 12.7 0.0 0.09 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like Lumazine_bd_2 PF12893.2 AJA92897.1 - 0.081 13.4 0.1 0.25 11.8 0.1 1.8 1 1 0 1 1 1 0 Putative lumazine-binding Lumazine_bd PF12870.2 AJA92897.1 - 0.12 12.4 0.5 0.41 10.6 0.4 2.1 1 1 0 1 1 1 0 Lumazine-binding domain Glycoprotein_G PF00802.14 AJA92898.1 - 0.054 12.6 9.8 0.054 12.6 6.8 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G MRP-L28 PF09812.4 AJA92898.1 - 0.18 11.6 6.5 0.2 11.5 4.5 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L28 RloB PF13707.1 AJA92898.1 - 0.51 9.9 4.2 0.62 9.6 2.9 1.1 1 0 0 1 1 1 0 RloB-like protein DUF3464 PF11947.3 AJA92898.1 - 2.9 7.3 5.4 2.8 7.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3464) Rtf2 PF04641.7 AJA92898.1 - 9.6 5.3 12.4 11 5.0 8.6 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger DUF87 PF01935.12 AJA92899.1 - 5.3e-38 131.1 0.5 1.4e-37 129.7 0.4 1.7 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 AJA92899.1 - 3.7e-19 69.3 1.7 1.6e-16 60.6 0.8 2.7 2 1 0 2 2 2 1 AAA-like domain DUF853 PF05872.7 AJA92899.1 - 0.0026 16.2 0.0 0.28 9.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) HAS-barrel PF09378.5 AJA92899.1 - 0.005 16.7 0.6 0.013 15.3 0.4 1.7 1 0 0 1 1 1 1 HAS barrel domain AAA_16 PF13191.1 AJA92899.1 - 0.0066 16.4 0.2 0.23 11.4 0.1 2.4 1 1 0 1 1 1 1 AAA ATPase domain TrwB_AAD_bind PF10412.4 AJA92899.1 - 0.0093 14.6 0.0 0.019 13.6 0.0 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain ABC_tran PF00005.22 AJA92899.1 - 0.018 15.3 0.1 0.044 14.0 0.1 1.8 1 1 0 1 1 1 0 ABC transporter Zot PF05707.7 AJA92899.1 - 0.047 13.1 0.0 0.096 12.1 0.0 1.5 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) FtsK_SpoIIIE PF01580.13 AJA92899.1 - 0.1 12.0 1.0 7.2 6.0 0.7 2.9 1 1 0 1 1 1 0 FtsK/SpoIIIE family LEA_2 PF03168.8 AJA92900.1 - 0.055 13.8 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 Late embryogenesis abundant protein Neurexophilin PF06312.7 AJA92901.1 - 0.27 10.4 3.0 0.27 10.4 2.1 1.1 1 0 0 1 1 1 0 Neurexophilin zf-C3HC4_4 PF15227.1 AJA92901.1 - 0.71 9.7 8.1 0.75 9.7 0.1 2.2 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING DUF2039 PF10217.4 AJA92901.1 - 0.81 9.7 11.4 0.68 9.9 7.0 1.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) GATA PF00320.22 AJA92901.1 - 3.1 7.2 8.1 13 5.2 5.6 2.3 1 1 0 1 1 1 0 GATA zinc finger DZR PF12773.2 AJA92901.1 - 4.2 7.2 8.7 11 5.8 6.2 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-DHHC PF01529.15 AJA92901.1 - 4.2 6.7 12.3 14 5.0 8.5 1.8 1 1 0 1 1 1 0 DHHC palmitoyltransferase Cript PF10235.4 AJA92901.1 - 4.8 7.5 10.9 6.5 7.1 7.6 1.3 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT Ribosomal_L32p PF01783.18 AJA92901.1 - 7.5 6.8 8.2 6.7 6.9 5.0 1.6 1 1 0 1 1 1 0 Ribosomal L32p protein family Rieske PF00355.21 AJA92902.1 - 2.3e-14 52.7 0.0 2.4e-14 52.6 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 AJA92902.1 - 1.4e-12 47.1 0.0 1.6e-12 47.0 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Peptidase_M20 PF01546.23 AJA92903.1 - 1.1e-30 106.5 0.2 1.4e-30 106.2 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 AJA92903.1 - 7e-15 54.7 0.7 8.4e-14 51.2 0.1 2.2 1 1 1 2 2 2 1 Peptidase dimerisation domain Peptidase_M42 PF05343.9 AJA92903.1 - 3.9e-06 25.8 0.6 0.062 12.0 0.0 2.4 1 1 1 2 2 2 2 M42 glutamyl aminopeptidase Peptidase_M1 PF01433.15 AJA92904.1 - 0.06 12.4 0.0 0.061 12.3 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M1 DUF4469 PF14734.1 AJA92904.1 - 0.1 12.5 1.0 0.45 10.4 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4469) with IG-like fold ABC2_membrane_3 PF12698.2 AJA92904.1 - 0.23 10.4 5.0 0.58 9.1 3.5 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF4097 PF13349.1 AJA92904.1 - 7.9 5.9 15.7 0.14 11.6 4.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4097) DUF4352 PF11611.3 AJA92905.1 - 2.5e-10 40.5 0.7 4.6e-10 39.6 0.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4352) Chlor_dismutase PF06778.7 AJA92906.1 - 5.7e-50 169.7 0.7 7.1e-50 169.4 0.5 1.1 1 0 0 1 1 1 1 Chlorite dismutase Baculo_PEP_C PF04513.7 AJA92907.1 - 0.0047 16.7 9.7 0.15 11.8 0.7 2.9 2 1 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Seryl_tRNA_N PF02403.17 AJA92907.1 - 0.021 14.8 14.9 0.021 14.8 10.3 4.0 2 1 0 3 3 2 0 Seryl-tRNA synthetase N-terminal domain EzrA PF06160.7 AJA92907.1 - 0.021 13.0 25.3 0.092 10.9 10.2 2.0 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA DUF745 PF05335.8 AJA92907.1 - 0.048 13.1 24.1 0.014 14.9 7.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF745) TPR_MLP1_2 PF07926.7 AJA92907.1 - 0.057 13.1 41.2 0.18 11.5 10.9 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein CENP-Q PF13094.1 AJA92907.1 - 0.074 13.0 25.4 0.025 14.6 8.5 2.4 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit UPF0184 PF03670.8 AJA92907.1 - 0.094 12.9 3.2 12 6.1 0.1 3.4 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0184) DASH_Duo1 PF08651.5 AJA92907.1 - 0.12 11.9 10.3 1.3 8.6 0.5 3.4 2 2 1 3 3 3 0 DASH complex subunit Duo1 MtrG PF04210.8 AJA92907.1 - 0.15 11.7 4.7 3.7 7.2 0.1 3.6 3 1 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G CHASE3 PF05227.8 AJA92907.1 - 0.17 11.5 12.9 0.76 9.4 0.8 2.7 1 1 1 2 2 2 0 CHASE3 domain FCH PF00611.18 AJA92907.1 - 0.68 10.1 24.2 1 9.5 7.4 3.6 2 2 0 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain DUF904 PF06005.7 AJA92907.1 - 0.69 10.2 26.3 2.7 8.3 0.4 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF904) TMPIT PF07851.8 AJA92907.1 - 0.93 8.5 28.2 0.19 10.8 7.7 2.2 2 0 0 2 2 2 0 TMPIT-like protein DUF3300 PF11737.3 AJA92907.1 - 1.6 7.9 6.4 2 7.6 3.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3300) DUF479 PF04336.7 AJA92907.1 - 3 7.9 5.0 3.2 7.9 0.1 2.9 2 2 1 3 3 3 0 Protein of unknown function, DUF479 IncA PF04156.9 AJA92907.1 - 5.2 6.6 34.5 11 5.6 12.0 2.5 1 1 2 3 3 3 0 IncA protein MCPsignal PF00015.16 AJA92907.1 - 5.6 6.4 21.6 28 4.1 11.2 2.4 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain COG2 PF06148.6 AJA92907.1 - 6 6.7 20.9 2.1 8.2 3.2 3.6 1 1 3 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Syntaxin-6_N PF09177.6 AJA92907.1 - 7 7.1 24.3 0.55 10.6 8.3 3.3 1 1 1 3 3 3 0 Syntaxin 6, N-terminal Cyclase PF04199.8 AJA92908.1 - 8.7e-38 129.6 0.0 1.1e-37 129.4 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase TrmB PF01978.14 AJA92909.1 - 1.7e-21 75.6 0.0 3.4e-21 74.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 AJA92909.1 - 9e-07 28.0 0.0 1.2e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.5 AJA92909.1 - 0.0001 21.7 0.0 0.00027 20.4 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.1 AJA92909.1 - 0.006 15.9 0.0 0.017 14.5 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.11 AJA92909.1 - 0.0061 16.6 0.0 0.073 13.1 0.0 2.2 2 0 0 2 2 2 1 Penicillinase repressor Rrf2 PF02082.15 AJA92909.1 - 0.018 15.1 0.0 0.046 13.8 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR PF03551.9 AJA92909.1 - 0.037 13.7 0.0 0.095 12.4 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_29 PF13551.1 AJA92909.1 - 0.047 13.8 0.0 0.097 12.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix PLDc_2 PF13091.1 AJA92909.1 - 0.065 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 PLD-like domain HTH_27 PF13463.1 AJA92909.1 - 0.072 13.4 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain PGM_PMM_I PF02878.11 AJA92910.1 - 4.3e-40 136.3 0.0 8.2e-40 135.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 AJA92910.1 - 1.5e-24 86.3 0.0 3.7e-24 85.0 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 AJA92910.1 - 7.4e-21 74.3 0.0 1.6e-20 73.2 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 AJA92910.1 - 4.8e-10 39.2 0.0 1.6e-09 37.6 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain NADHdh PF00146.16 AJA92911.1 - 1.9e-79 266.9 5.1 3.3e-79 266.1 3.5 1.4 1 1 0 1 1 1 1 NADH dehydrogenase Methyltransf_25 PF13649.1 AJA92912.1 - 1.2e-12 48.0 0.0 1.9e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 AJA92912.1 - 1.2e-10 41.2 0.3 1.9e-10 40.5 0.1 1.7 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 AJA92912.1 - 2.4e-09 37.7 0.0 4e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA92912.1 - 6e-08 33.0 0.0 1.1e-07 32.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 AJA92912.1 - 1.2e-06 27.8 0.0 1.8e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.1 AJA92912.1 - 1.8e-06 27.7 0.0 2.6e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 AJA92912.1 - 4.3e-06 27.1 0.0 9.7e-06 25.9 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain MTS PF05175.9 AJA92912.1 - 4.1e-05 23.0 0.0 6.8e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 AJA92912.1 - 0.00036 19.6 0.0 0.00062 18.8 0.0 1.4 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_26 PF13659.1 AJA92912.1 - 0.00048 20.1 0.0 0.00059 19.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Rsm22 PF09243.5 AJA92912.1 - 0.00073 18.6 0.0 0.001 18.1 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_23 PF13489.1 AJA92912.1 - 0.00093 18.9 0.0 0.0012 18.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 AJA92912.1 - 0.0057 15.5 0.0 0.0096 14.8 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase DOT1 PF08123.8 AJA92912.1 - 0.011 15.1 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_PK PF05891.7 AJA92912.1 - 0.053 12.8 0.0 0.071 12.4 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_16 PF10294.4 AJA92912.1 - 0.054 12.9 0.1 0.09 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase TPMT PF05724.6 AJA92912.1 - 0.061 12.7 0.0 0.082 12.3 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) TPR_11 PF13414.1 AJA92913.1 - 1.4e-44 149.5 19.6 1.8e-14 53.1 1.9 4.1 2 1 3 5 5 5 5 TPR repeat TPR_1 PF00515.23 AJA92913.1 - 4.2e-35 117.9 13.7 7.4e-08 31.6 0.1 6.7 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.12 AJA92913.1 - 2e-31 105.3 6.3 2.5e-06 26.9 0.2 7.1 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 AJA92913.1 - 3.8e-26 91.1 0.2 2.9e-08 34.1 0.0 4.6 2 2 3 5 5 5 4 Tetratricopeptide repeat TPR_17 PF13431.1 AJA92913.1 - 4.6e-25 85.6 5.8 7.2e-05 22.6 0.1 6.5 7 0 0 7 7 6 4 Tetratricopeptide repeat TPR_8 PF13181.1 AJA92913.1 - 2.8e-23 79.8 12.9 1.5e-05 24.4 0.3 6.9 5 2 2 7 7 7 6 Tetratricopeptide repeat TPR_14 PF13428.1 AJA92913.1 - 1e-22 78.5 0.1 0.00014 22.1 0.1 7.1 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.1 AJA92913.1 - 4.5e-21 74.9 4.8 3.9e-06 27.1 0.0 4.4 2 1 2 5 5 5 4 Tetratricopeptide repeat TPR_6 PF13174.1 AJA92913.1 - 6.6e-20 70.1 1.1 0.0078 16.6 0.0 7.0 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_12 PF13424.1 AJA92913.1 - 6.3e-19 67.6 10.9 5.3e-07 29.4 0.2 5.2 1 1 5 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 AJA92913.1 - 1.6e-14 53.5 0.0 1.2e-05 25.0 0.0 4.3 2 2 3 5 5 5 4 Tetratricopeptide repeat Apc3 PF12895.2 AJA92913.1 - 1.6e-14 53.7 1.0 5.3e-05 23.2 0.0 3.7 2 1 2 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 AJA92913.1 - 6.6e-10 38.0 0.1 0.21 11.4 0.0 6.1 6 0 0 6 6 6 1 Tetratricopeptide repeat NARP1 PF12569.3 AJA92913.1 - 4.3e-08 32.3 3.8 0.0035 16.1 0.2 3.4 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 TPR_20 PF14561.1 AJA92913.1 - 7.1e-06 26.0 3.5 0.96 9.6 0.5 4.4 2 2 3 5 5 5 2 Tetratricopeptide repeat FAT PF02259.18 AJA92913.1 - 3.2e-05 23.0 0.8 1.3 7.9 0.1 3.1 1 1 1 3 3 3 2 FAT domain TPR_10 PF13374.1 AJA92913.1 - 3.3e-05 23.6 1.0 0.022 14.6 0.2 4.3 5 0 0 5 5 4 1 Tetratricopeptide repeat PPR PF01535.15 AJA92913.1 - 0.0008 19.2 6.6 23 5.2 0.0 6.2 7 0 0 7 7 7 0 PPR repeat Thioredoxin_6 PF13848.1 AJA92913.1 - 0.0011 18.8 1.1 0.033 14.0 0.3 2.7 2 2 0 2 2 2 1 Thioredoxin-like domain Coatomer_E PF04733.9 AJA92913.1 - 0.0011 18.2 4.7 0.15 11.2 0.7 2.9 2 1 1 3 3 3 1 Coatomer epsilon subunit Paf67 PF10255.4 AJA92913.1 - 0.0032 16.4 0.0 0.12 11.2 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase I-associated factor PAF67 TPR_21 PF09976.4 AJA92913.1 - 0.0059 16.5 4.3 0.012 15.6 0.1 2.5 2 1 0 3 3 3 1 Tetratricopeptide repeat TPR_15 PF13429.1 AJA92913.1 - 0.007 15.4 1.5 0.1 11.6 0.2 2.8 1 1 1 2 2 2 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 AJA92913.1 - 0.0088 16.2 0.6 8.9 6.5 0.1 3.3 2 1 0 3 3 3 0 Alkyl sulfatase dimerisation DUF3856 PF12968.2 AJA92913.1 - 0.017 14.9 0.2 6.6 6.5 0.0 3.8 2 2 1 3 3 3 0 Domain of Unknown Function (DUF3856) Rapsyn_N PF10579.4 AJA92913.1 - 0.035 13.8 0.1 11 5.8 0.0 4.0 2 2 1 4 4 4 0 Rapsyn N-terminal myristoylation and linker region MIT PF04212.13 AJA92913.1 - 0.093 12.6 7.1 3.4 7.6 0.3 4.9 4 2 1 5 5 5 0 MIT (microtubule interacting and transport) domain Proteasome PF00227.21 AJA92914.1 - 7.9e-46 155.7 0.0 9.7e-46 155.4 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Sec61_beta PF03911.11 AJA92915.1 - 2.6e-15 55.9 0.3 3e-15 55.7 0.2 1.1 1 0 0 1 1 1 1 Sec61beta family Ribosomal_S7 PF00177.16 AJA92916.1 - 5.3e-36 123.4 0.2 8.4e-36 122.7 0.1 1.3 1 1 0 1 1 1 1 Ribosomal protein S7p/S5e ABC_tran PF00005.22 AJA92917.1 - 1.5e-31 109.5 0.0 2.8e-31 108.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 AJA92917.1 - 7.9e-13 49.0 0.0 1.2e-05 25.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.1 AJA92917.1 - 4.1e-05 22.8 0.0 0.0069 15.4 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_17 PF13207.1 AJA92917.1 - 0.00012 22.8 0.1 0.00024 21.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 AJA92917.1 - 0.0004 20.4 0.1 0.00092 19.2 0.0 1.5 2 0 0 2 2 1 1 AAA ATPase domain AAA PF00004.24 AJA92917.1 - 0.00069 19.8 0.4 0.0081 16.3 0.3 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 AJA92917.1 - 0.0016 17.6 0.0 0.0022 17.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function, DUF258 SMC_N PF02463.14 AJA92917.1 - 0.0018 17.5 0.4 0.56 9.3 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 AJA92917.1 - 0.0026 18.0 0.0 0.0047 17.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.4 AJA92917.1 - 0.0029 16.2 0.6 0.32 9.5 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_22 PF13401.1 AJA92917.1 - 0.0049 17.0 0.0 0.015 15.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain Miro PF08477.8 AJA92917.1 - 0.0057 17.1 0.0 0.018 15.5 0.0 1.8 2 0 0 2 2 2 1 Miro-like protein Rad17 PF03215.10 AJA92917.1 - 0.0064 15.2 0.0 0.011 14.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_25 PF13481.1 AJA92917.1 - 0.007 15.7 0.0 0.016 14.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.1 AJA92917.1 - 0.0092 15.4 0.0 0.019 14.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RNA_helicase PF00910.17 AJA92917.1 - 0.0096 16.0 0.1 0.077 13.1 0.0 2.3 2 1 1 3 3 3 1 RNA helicase NACHT PF05729.7 AJA92917.1 - 0.015 14.9 0.0 0.028 14.0 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.1 AJA92917.1 - 0.016 15.1 0.0 0.031 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.9 AJA92917.1 - 0.018 14.7 0.1 0.11 12.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.1 AJA92917.1 - 0.02 15.2 0.2 0.031 14.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.10 AJA92917.1 - 0.021 13.4 0.1 0.58 8.7 0.0 2.3 3 0 0 3 3 3 0 Adenovirus IVa2 protein Arch_ATPase PF01637.13 AJA92917.1 - 0.034 13.8 0.1 0.096 12.3 0.0 1.8 1 1 0 1 1 1 0 Archaeal ATPase AAA_28 PF13521.1 AJA92917.1 - 0.044 13.7 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.1 AJA92917.1 - 0.047 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 AJA92917.1 - 0.05 13.1 0.0 0.21 11.1 0.0 1.9 2 1 0 2 2 2 0 AAA domain MobB PF03205.9 AJA92917.1 - 0.053 13.2 0.0 0.12 12.0 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B T2SE PF00437.15 AJA92917.1 - 0.069 12.0 0.2 4.6 6.0 0.0 2.6 2 1 0 2 2 2 0 Type II/IV secretion system protein AAA_10 PF12846.2 AJA92917.1 - 0.081 12.3 0.1 0.19 11.1 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain IstB_IS21 PF01695.12 AJA92917.1 - 0.093 12.1 0.7 0.78 9.1 0.1 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.18 AJA92917.1 - 0.11 12.4 0.1 0.16 11.9 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATP-synt_ab PF00006.20 AJA92917.1 - 0.15 11.5 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain adh_short_C2 PF13561.1 AJA92918.1 - 1.5e-08 34.7 0.0 1.9e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase THF_DHG_CYH_C PF02882.14 AJA92918.1 - 0.0043 16.1 0.0 0.011 14.8 0.0 1.7 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain adh_short PF00106.20 AJA92918.1 - 0.0081 16.0 0.0 2.3 8.1 0.0 2.2 1 1 1 2 2 2 2 short chain dehydrogenase RmlD_sub_bind PF04321.12 AJA92918.1 - 0.076 11.8 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Fer4 PF00037.22 AJA92919.1 - 1.7e-10 40.0 14.3 5.3e-05 22.6 2.1 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 AJA92919.1 - 1.1e-08 35.3 2.5 0.0001 22.6 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 AJA92919.1 - 3.7e-08 33.2 0.8 0.0012 18.8 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 AJA92919.1 - 3e-07 30.7 9.2 9.6e-07 29.0 6.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 AJA92919.1 - 3.9e-07 30.2 9.3 2e-06 27.9 6.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 AJA92919.1 - 8.3e-07 28.7 17.5 7.1e-05 22.5 5.7 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 AJA92919.1 - 8.8e-06 26.3 15.4 0.0014 19.3 5.5 2.8 1 1 2 3 3 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 AJA92919.1 - 1.5e-05 24.9 7.2 0.0081 16.4 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 AJA92919.1 - 3.2e-05 23.6 12.9 0.007 16.2 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 AJA92919.1 - 8.4e-05 22.2 12.6 0.01 15.7 1.5 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 AJA92919.1 - 0.00017 21.8 6.8 0.018 15.3 5.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 AJA92919.1 - 0.00089 19.0 9.8 0.16 11.8 6.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 AJA92919.1 - 0.0097 16.4 16.9 0.42 11.2 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 AJA92919.1 - 0.012 16.1 12.9 0.31 11.6 2.1 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 AJA92919.1 - 0.027 14.8 11.9 0.9 9.9 1.9 2.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain 2-Hacid_dh_C PF02826.14 AJA92920.1 - 3.7e-61 205.3 0.0 5.9e-61 204.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 AJA92920.1 - 1e-29 102.6 0.2 1.2e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 AJA92920.1 - 0.00051 19.9 0.9 0.0076 16.0 0.0 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 AJA92921.1 - 1.8e-49 167.6 0.7 3.6e-49 166.6 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 AJA92921.1 - 8.8e-32 109.1 1.6 1.1e-31 108.9 0.1 1.9 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 AJA92921.1 - 5.3e-27 94.0 1.3 3.9e-26 91.2 0.5 2.5 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.12 AJA92921.1 - 4e-08 33.5 0.8 0.00083 19.7 0.0 3.8 3 1 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 AJA92921.1 - 1.4e-06 28.2 0.3 5.5e-05 23.0 0.0 2.7 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 AJA92921.1 - 0.00014 21.6 0.3 0.0013 18.4 0.0 2.7 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 AJA92921.1 - 0.00042 20.0 0.0 0.002 17.7 0.0 2.2 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 AJA92921.1 - 0.0014 17.8 1.8 0.69 9.0 0.1 3.0 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 AJA92921.1 - 0.0024 17.8 0.0 0.012 15.6 0.0 2.2 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.1 AJA92921.1 - 0.0066 16.6 0.2 1.5 9.1 0.1 2.8 2 0 0 2 2 2 1 Putative NAD(P)-binding Sugar-bind PF04198.8 AJA92921.1 - 0.014 14.3 0.0 0.026 13.4 0.0 1.4 1 0 0 1 1 1 0 Putative sugar-binding domain AAA_17 PF13207.1 AJA92923.1 - 3.4e-12 47.2 0.1 4.7e-12 46.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 AJA92923.1 - 9.3e-11 42.1 0.2 1.4e-10 41.5 0.1 1.3 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 AJA92923.1 - 7.8e-05 22.4 1.0 0.0032 17.1 0.1 2.5 2 1 1 3 3 3 1 NTPase ArgK PF03308.11 AJA92923.1 - 0.00023 20.0 0.1 0.0005 18.9 0.0 1.5 1 0 0 1 1 1 1 ArgK protein AAA_28 PF13521.1 AJA92923.1 - 0.00028 20.8 0.1 0.00067 19.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 AJA92923.1 - 0.00037 20.3 0.1 0.00096 19.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 AJA92923.1 - 0.00038 20.6 0.3 0.00093 19.4 0.2 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.17 AJA92923.1 - 0.00038 19.9 0.0 0.00058 19.3 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_16 PF13191.1 AJA92923.1 - 0.00044 20.2 0.0 0.00064 19.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain ADK PF00406.17 AJA92923.1 - 0.00045 20.1 0.3 0.00075 19.3 0.1 1.5 1 1 0 1 1 1 1 Adenylate kinase APS_kinase PF01583.15 AJA92923.1 - 0.00049 19.7 0.0 0.0063 16.1 0.0 2.2 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_22 PF13401.1 AJA92923.1 - 0.0005 20.2 0.1 0.00088 19.4 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 AJA92923.1 - 0.0024 17.7 0.0 0.0052 16.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 AJA92923.1 - 0.0054 16.6 0.4 0.021 14.7 0.2 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.1 AJA92923.1 - 0.0081 15.5 0.8 0.91 8.8 0.2 2.4 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 AJA92923.1 - 0.013 14.5 0.3 0.042 12.9 0.0 1.9 2 1 0 2 2 2 0 Zeta toxin KTI12 PF08433.5 AJA92923.1 - 0.025 13.7 0.6 0.046 12.9 0.1 1.8 2 1 0 2 2 2 0 Chromatin associated protein KTI12 NB-ARC PF00931.17 AJA92923.1 - 0.032 13.1 0.1 0.045 12.6 0.1 1.4 1 1 0 1 1 1 0 NB-ARC domain AAA_5 PF07728.9 AJA92923.1 - 0.041 13.6 0.6 0.2 11.4 0.3 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.1 AJA92923.1 - 0.041 13.3 0.2 0.073 12.6 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain cobW PF02492.14 AJA92923.1 - 0.042 13.3 0.3 0.051 13.0 0.2 1.6 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.18 AJA92923.1 - 0.061 12.7 1.1 0.18 11.2 0.5 1.8 1 1 1 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_10 PF12846.2 AJA92923.1 - 0.061 12.7 0.3 0.15 11.4 0.2 1.5 1 1 0 1 1 1 0 AAA-like domain AAA_30 PF13604.1 AJA92923.1 - 0.068 12.7 0.1 0.094 12.2 0.1 1.4 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 AJA92923.1 - 0.08 12.4 0.1 0.13 11.7 0.0 1.5 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.1 AJA92923.1 - 0.11 12.2 0.0 0.32 10.7 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain CoaE PF01121.15 AJA92923.1 - 0.11 11.8 0.3 0.87 8.9 0.0 2.0 2 0 0 2 2 2 0 Dephospho-CoA kinase Cu-oxidase_3 PF07732.10 AJA92924.1 - 6.6e-05 22.6 0.6 0.00016 21.4 0.2 1.9 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.9 AJA92924.1 - 0.0019 17.6 0.9 1.9 8.0 0.1 2.7 2 1 0 2 2 2 2 Multicopper oxidase BPD_transp_1 PF00528.17 AJA92927.1 - 4.4e-40 137.1 17.1 4.4e-40 137.1 11.9 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component FtsX PF02687.16 AJA92927.1 - 0.0012 18.6 21.5 0.014 15.1 2.8 2.4 2 0 0 2 2 2 2 FtsX-like permease family DUF373 PF04123.8 AJA92927.1 - 0.64 8.9 7.3 0.4 9.6 3.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF373) DUF3169 PF11368.3 AJA92927.1 - 1.2 8.3 8.2 4 6.5 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) DUF204 PF02659.10 AJA92927.1 - 5.3 7.2 10.5 0.18 11.9 1.2 2.9 2 2 1 3 3 3 0 Domain of unknown function DUF B-block_TFIIIC PF04182.7 AJA92928.1 - 0.0024 17.6 0.2 0.0045 16.8 0.1 1.5 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR PF01047.17 AJA92928.1 - 0.0039 16.8 0.2 0.0083 15.8 0.1 1.6 1 0 0 1 1 1 1 MarR family RPA_C PF08784.6 AJA92928.1 - 0.14 12.5 2.2 0.73 10.2 1.5 2.1 1 1 0 1 1 1 0 Replication protein A C terminal MIP-T3 PF10243.4 AJA92928.1 - 1.9 6.8 44.4 2.2 6.6 30.8 1.1 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 CDC27 PF09507.5 AJA92928.1 - 5.3 6.1 46.2 6.9 5.7 32.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Aminotran_1_2 PF00155.16 AJA92929.1 - 7.3e-49 166.6 0.0 8.6e-49 166.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 AJA92929.1 - 3.2e-05 23.2 0.1 0.00015 21.0 0.1 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 AJA92929.1 - 0.00093 17.5 0.0 0.0014 16.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 AJA92929.1 - 0.0019 17.0 0.4 0.0037 16.0 0.3 1.4 1 1 0 1 1 1 1 Aminotransferase class-V DUF930 PF06059.7 AJA92929.1 - 0.085 13.1 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) PilP PF04351.8 AJA92929.1 - 0.11 12.4 0.1 19 5.1 0.0 2.4 2 0 0 2 2 2 0 Pilus assembly protein, PilP Epimerase PF01370.16 AJA92930.1 - 1.1e-57 195.2 0.0 1.3e-57 194.9 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 AJA92930.1 - 1.4e-26 92.8 0.1 2.1e-26 92.3 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 AJA92930.1 - 4e-23 81.7 0.0 4.6e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 AJA92930.1 - 1.1e-21 76.9 0.1 6e-21 74.5 0.1 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 AJA92930.1 - 1.8e-16 59.8 0.1 8e-14 51.1 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 AJA92930.1 - 1.5e-09 38.1 0.0 3.4e-09 36.9 0.0 1.5 2 0 0 2 2 2 1 NADH(P)-binding adh_short PF00106.20 AJA92930.1 - 3.5e-09 36.7 0.0 5.5e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 AJA92930.1 - 2.1e-07 30.7 0.0 3.9e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 KR domain Saccharop_dh PF03435.13 AJA92930.1 - 5.9e-05 22.2 0.1 8.7e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NmrA PF05368.8 AJA92930.1 - 0.00014 21.1 0.1 0.00029 20.1 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family Epimerase_Csub PF13950.1 AJA92930.1 - 0.0017 18.2 0.0 0.0028 17.5 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit UDPG_MGDP_dh_N PF03721.9 AJA92930.1 - 0.013 14.8 0.1 0.026 13.9 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.15 AJA92930.1 - 0.027 14.5 0.0 0.048 13.7 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.13 AJA92930.1 - 0.039 13.9 0.2 0.18 11.8 0.0 2.1 3 0 0 3 3 2 0 TrkA-N domain ELFV_dehydrog PF00208.16 AJA92930.1 - 0.049 13.2 0.1 0.084 12.4 0.1 1.5 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.13 AJA92930.1 - 0.061 12.9 0.0 0.095 12.3 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1031 PF06275.6 AJA92930.1 - 0.092 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1031) DUF4369 PF14289.1 AJA92931.1 - 0.014 15.3 0.1 0.028 14.4 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4369) Big_3_4 PF13754.1 AJA92931.1 - 0.13 12.5 1.3 0.19 12.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) A2L_zn_ribbon PF08792.5 AJA92932.1 - 0.013 14.9 3.2 0.046 13.2 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain Rpr2 PF04032.11 AJA92932.1 - 0.052 13.4 0.1 2.2 8.2 0.0 2.2 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain HNH_5 PF14279.1 AJA92932.1 - 0.056 13.4 5.1 1.5 8.8 0.3 2.8 1 1 1 2 2 2 0 HNH endonuclease zinc-ribbons_6 PF07191.7 AJA92932.1 - 0.068 12.9 0.1 11 5.9 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbons DUF4182 PF13790.1 AJA92932.1 - 0.081 12.7 2.7 0.13 12.0 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4182) TF_Zn_Ribbon PF08271.7 AJA92932.1 - 0.11 11.8 1.2 0.79 9.0 0.9 2.2 1 1 0 1 1 1 0 TFIIB zinc-binding zf-HIT PF04438.11 AJA92932.1 - 0.12 12.0 1.8 3.1 7.5 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger SAP30_Sin3_bdg PF13867.1 AJA92932.1 - 0.14 12.0 0.1 0.24 11.2 0.1 1.5 1 1 0 1 1 1 0 Sin3 binding region of histone deacetylase complex subunit SAP30 DZR PF12773.2 AJA92932.1 - 0.19 11.5 1.9 0.47 10.3 1.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon Gin PF10764.4 AJA92932.1 - 0.22 11.2 2.6 0.22 11.2 0.1 2.0 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin Prim_Zn_Ribbon PF08273.7 AJA92932.1 - 0.31 11.1 3.3 1.4 9.0 0.5 2.6 2 1 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-C2H2_6 PF13912.1 AJA92932.1 - 0.35 10.8 4.9 2.3 8.2 0.3 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Inhibitor_I67 PF11405.3 AJA92932.1 - 0.69 9.9 3.2 5.5 7.1 0.2 2.3 2 1 1 3 3 3 0 Bromelain inhibitor VI DegT_DnrJ_EryC1 PF01041.12 AJA92933.1 - 7.6e-119 396.9 0.0 8.7e-119 396.7 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 AJA92933.1 - 8.4e-11 41.4 0.2 1.5e-10 40.6 0.2 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 AJA92933.1 - 4.1e-05 22.0 0.4 6.4e-05 21.3 0.2 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 AJA92933.1 - 4.2e-05 22.4 1.0 0.00015 20.6 0.7 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 AJA92933.1 - 0.0095 15.1 0.4 0.019 14.0 0.3 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Surfac_D-trimer PF09006.6 AJA92933.1 - 0.0097 15.6 0.0 0.024 14.3 0.0 1.7 1 0 0 1 1 1 1 Lung surfactant protein D coiled-coil trimerisation DUF1967 PF09269.6 AJA92933.1 - 0.042 13.5 0.0 1.1 8.9 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1967) Auto_anti-p27 PF06677.7 AJA92934.1 - 1.3e-09 37.6 1.3 1.9e-09 37.0 0.9 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) ERM PF00769.14 AJA92934.1 - 0.011 15.3 0.8 0.012 15.1 0.6 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF1178 PF06676.6 AJA92934.1 - 0.11 12.7 0.4 0.14 12.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Prim_Zn_Ribbon PF08273.7 AJA92934.1 - 0.14 12.2 3.1 0.36 10.9 2.1 1.6 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase TF_Zn_Ribbon PF08271.7 AJA92934.1 - 0.19 11.0 1.9 0.41 10.0 1.3 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 AJA92934.1 - 0.51 10.6 2.4 2.3 8.6 1.6 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-RING_3 PF14369.1 AJA92934.1 - 1.6 8.7 3.7 22 5.1 0.0 2.3 1 1 1 2 2 2 0 zinc-finger DUF3733 PF12534.3 AJA92935.1 - 0.033 13.4 0.0 0.13 11.5 0.0 2.1 1 0 0 1 1 1 0 Leucine-rich repeat containing protein 8 SBDS PF01172.13 AJA92936.1 - 1.5e-24 85.5 0.8 2.7e-24 84.7 0.5 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 AJA92936.1 - 3.2e-18 65.6 0.0 5.1e-18 64.9 0.0 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.19 AJA92936.1 - 0.049 13.4 0.0 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 Elongation factor G C-terminus Radical_SAM PF04055.16 AJA92938.1 - 1.4e-05 25.3 0.2 0.0034 17.5 0.0 2.4 1 1 1 2 2 2 2 Radical SAM superfamily Fer4_14 PF13394.1 AJA92938.1 - 0.00011 22.1 0.0 0.00026 20.9 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 AJA92938.1 - 0.0027 17.8 0.0 0.0068 16.5 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF106 PF01956.11 AJA92940.1 - 1.1e-12 47.8 12.4 3.5e-12 46.1 8.6 1.7 1 1 0 1 1 1 1 Integral membrane protein DUF106 ISK_Channel PF02060.10 AJA92940.1 - 0.11 12.0 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel DUF912 PF06024.7 AJA92940.1 - 0.12 12.4 0.2 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) Phage_int_SAM_2 PF12834.2 AJA92940.1 - 0.14 12.5 0.5 0.14 12.5 0.3 1.9 1 1 1 2 2 2 0 Phage integrase, N-terminal DUF4199 PF13858.1 AJA92940.1 - 0.51 10.2 5.7 0.56 10.1 2.3 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4199) Coiled-coil_56 PF09813.4 AJA92941.1 - 0.029 14.3 0.9 0.12 12.4 0.0 2.2 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 56 DUF4179 PF13786.1 AJA92941.1 - 0.064 13.4 1.5 0.11 12.6 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF106 PF01956.11 AJA92941.1 - 0.067 12.7 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Integral membrane protein DUF106 PAP2 PF01569.16 AJA92943.1 - 6.5e-24 84.0 1.8 9.4e-24 83.5 1.3 1.2 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.1 AJA92943.1 - 2.9e-07 30.1 1.4 4.2e-07 29.6 1.0 1.3 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.1 AJA92943.1 - 1.4e-05 25.2 0.8 1.4e-05 25.2 0.5 2.0 2 0 0 2 2 2 1 PAP2 superfamily C-terminal O-antigen_lig PF13425.1 AJA92943.1 - 0.1 12.5 0.2 0.1 12.5 0.1 2.5 2 1 0 2 2 2 0 O-antigen ligase like membrane protein VanZ PF04892.7 AJA92943.1 - 0.21 11.5 2.2 0.62 10.0 0.1 2.2 2 1 0 2 2 2 0 VanZ like family Wzy_C PF04932.10 AJA92943.1 - 1.3 8.7 4.6 2 8.1 3.1 1.6 1 1 0 1 1 1 0 O-Antigen ligase RibD_C PF01872.12 AJA92945.1 - 2.8e-48 164.1 0.2 3.2e-48 164.0 0.2 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Sep15_SelM PF08806.6 AJA92945.1 - 0.11 12.1 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 Sep15/SelM redox domain Polyketide_cyc2 PF10604.4 AJA92947.1 - 2.7e-09 37.3 0.0 3.1e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.15 AJA92947.1 - 2.2e-07 30.9 0.0 5.1e-07 29.7 0.0 1.6 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport GHMP_kinases_N PF00288.21 AJA92948.1 - 3e-10 40.0 0.3 6.5e-10 38.9 0.2 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 AJA92948.1 - 0.0038 17.3 0.0 0.0079 16.3 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal PHP PF02811.14 AJA92948.1 - 0.043 13.6 0.0 0.047 13.4 0.0 1.2 1 0 0 1 1 1 0 PHP domain DUF1722 PF08349.6 AJA92948.1 - 0.065 13.1 0.2 3.3 7.6 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1722) SASP PF00269.15 AJA92948.1 - 0.075 12.9 0.1 0.23 11.3 0.0 1.8 1 0 0 1 1 1 0 Small, acid-soluble spore proteins, alpha/beta type PGM_PMM_II PF02879.11 AJA92948.1 - 0.081 13.2 0.0 0.18 12.1 0.0 1.6 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Spc7 PF08317.6 AJA92949.1 - 1.2e-05 24.1 5.5 1.6e-05 23.7 3.8 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein AAA_13 PF13166.1 AJA92949.1 - 0.00039 19.0 3.7 0.00046 18.8 2.6 1.0 1 0 0 1 1 1 1 AAA domain DUF1664 PF07889.7 AJA92949.1 - 0.0018 18.0 2.9 0.0026 17.5 2.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) CENP-Q PF13094.1 AJA92949.1 - 0.0019 18.2 1.6 0.0031 17.5 0.9 1.4 1 1 0 1 1 1 1 CENP-Q, a CENPA-CAD centromere complex subunit DUF3450 PF11932.3 AJA92949.1 - 0.0034 16.7 0.4 0.0039 16.5 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) IncA PF04156.9 AJA92949.1 - 0.0036 16.9 3.6 0.0055 16.3 2.1 1.4 1 1 0 1 1 1 1 IncA protein ADIP PF11559.3 AJA92949.1 - 0.0064 16.3 2.5 0.014 15.2 1.7 1.7 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Tropomyosin_1 PF12718.2 AJA92949.1 - 0.0065 16.3 11.1 0.056 13.2 7.7 2.0 1 1 1 2 2 2 1 Tropomyosin like FAM92 PF06730.6 AJA92949.1 - 0.0076 15.6 1.1 0.0091 15.3 0.7 1.1 1 0 0 1 1 1 1 FAM92 protein AKNA PF12443.3 AJA92949.1 - 0.0087 16.0 0.7 0.03 14.3 0.2 1.9 1 1 1 2 2 2 1 AT-hook-containing transcription factor Reo_sigmaC PF04582.7 AJA92949.1 - 0.015 14.4 0.9 0.017 14.3 0.6 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein Atg14 PF10186.4 AJA92949.1 - 0.025 13.5 1.9 0.031 13.2 1.3 1.3 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 DUF3552 PF12072.3 AJA92949.1 - 0.055 12.6 8.2 0.22 10.7 5.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) FemAB PF02388.11 AJA92949.1 - 0.059 12.0 1.9 0.075 11.7 1.3 1.2 1 0 0 1 1 1 0 FemAB family Mod_r PF07200.8 AJA92949.1 - 0.06 13.2 3.1 3.3 7.6 2.2 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Prefoldin PF02996.12 AJA92949.1 - 0.064 12.9 4.4 0.16 11.6 0.7 2.3 1 1 2 3 3 3 0 Prefoldin subunit Spectrin PF00435.16 AJA92949.1 - 0.087 13.1 2.7 0.17 12.1 1.6 1.6 1 1 0 1 1 1 0 Spectrin repeat DUF4200 PF13863.1 AJA92949.1 - 0.17 11.8 7.0 0.19 11.6 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) TBPIP PF07106.8 AJA92949.1 - 0.19 11.2 8.9 4 6.9 4.4 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Mnd1 PF03962.10 AJA92949.1 - 0.21 11.2 5.4 0.33 10.6 3.7 1.4 1 1 0 1 1 1 0 Mnd1 family DUF4618 PF15397.1 AJA92949.1 - 0.21 10.8 5.5 0.45 9.8 3.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Laminin_II PF06009.7 AJA92949.1 - 0.22 11.2 3.4 0.37 10.5 2.3 1.5 1 1 0 1 1 1 0 Laminin Domain II DUF724 PF05266.9 AJA92949.1 - 0.23 11.0 7.8 0.27 10.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF4201 PF13870.1 AJA92949.1 - 0.29 10.5 6.7 1.6 8.1 3.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Sec2p PF06428.6 AJA92949.1 - 0.32 10.8 7.2 3.7 7.4 1.7 2.4 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p TMF_DNA_bd PF12329.3 AJA92949.1 - 0.37 10.6 12.5 0.38 10.5 5.5 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF972 PF06156.8 AJA92949.1 - 0.38 11.1 5.8 0.61 10.4 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF972) GAS PF13851.1 AJA92949.1 - 0.66 9.1 9.2 0.6 9.2 5.3 1.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Enkurin PF13864.1 AJA92949.1 - 0.81 9.9 6.2 0.8 9.9 2.0 2.2 1 1 1 2 2 2 0 Calmodulin-binding DUF848 PF05852.6 AJA92949.1 - 0.83 9.4 4.9 1.8 8.3 3.0 1.7 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Bap31 PF05529.7 AJA92949.1 - 0.88 8.9 3.6 0.27 10.6 0.7 1.5 2 0 0 2 2 2 0 B-cell receptor-associated protein 31-like Syntaxin PF00804.20 AJA92949.1 - 1.4 9.0 8.9 6.7 6.9 5.5 2.0 1 1 1 2 2 2 0 Syntaxin XhlA PF10779.4 AJA92949.1 - 2.6 8.0 9.1 4.4 7.3 0.9 2.4 1 1 1 2 2 2 0 Haemolysin XhlA CCDC-167 PF15188.1 AJA92949.1 - 3.1 7.8 6.9 3.7 7.5 3.5 2.0 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Prefoldin_2 PF01920.15 AJA92949.1 - 3.3 7.5 9.3 5.4 6.8 3.0 2.4 1 1 3 4 4 4 0 Prefoldin subunit DivIC PF04977.10 AJA92949.1 - 4.2 6.9 7.2 7.6 6.1 3.0 2.3 1 1 1 2 2 2 0 Septum formation initiator His_biosynth PF00977.16 AJA92950.1 - 8.8e-83 277.0 1.1 1e-82 276.8 0.7 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 AJA92950.1 - 1.7e-07 30.3 0.1 9.8e-05 21.3 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.9 AJA92950.1 - 4.4e-05 22.6 0.1 0.024 13.7 0.0 2.3 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 AJA92950.1 - 0.00014 21.1 0.1 0.055 12.5 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase PcrB PF01884.12 AJA92950.1 - 0.00017 20.9 0.5 0.00032 20.0 0.1 1.6 2 0 0 2 2 2 1 PcrB family TMP-TENI PF02581.12 AJA92950.1 - 0.0014 17.7 0.1 0.36 9.9 0.0 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI Trp_syntA PF00290.15 AJA92950.1 - 0.0066 15.0 0.1 0.01 14.3 0.0 1.2 1 0 0 1 1 1 1 Tryptophan synthase alpha chain DHO_dh PF01180.16 AJA92950.1 - 0.0072 15.3 0.1 0.46 9.3 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase IMPDH PF00478.20 AJA92950.1 - 0.043 12.7 1.3 0.98 8.2 0.2 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Rieske PF00355.21 AJA92951.1 - 8.9e-09 34.8 0.0 1.3e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Oxidored_q2 PF00420.19 AJA92952.1 - 6.9e-22 76.8 2.0 7.4e-22 76.7 1.4 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MarC PF01914.12 AJA92952.1 - 0.083 11.9 2.0 0.1 11.6 1.4 1.3 1 1 0 1 1 1 0 MarC family integral membrane protein DoxX PF07681.7 AJA92952.1 - 0.086 13.2 2.9 0.11 12.8 2.0 1.2 1 0 0 1 1 1 0 DoxX DUF3165 PF11364.3 AJA92952.1 - 0.28 11.3 3.4 4.9 7.3 2.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3165) Pcc1 PF09341.5 AJA92953.1 - 6.6e-09 35.6 0.0 7.5e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 Ribosomal_S17 PF00366.15 AJA92954.1 - 1.4e-17 63.4 1.1 1.4e-17 63.4 0.8 1.4 2 0 0 2 2 2 1 Ribosomal protein S17 Pribosyltran PF00156.22 AJA92955.1 - 1.2e-18 67.0 0.1 1.4e-18 66.7 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 AJA92955.1 - 0.01 15.0 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase tRNA-synt_2 PF00152.15 AJA92956.1 - 5.6e-86 288.3 0.6 1.6e-85 286.8 0.5 1.7 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 AJA92956.1 - 1.3e-10 40.9 0.5 3.4e-10 39.6 0.4 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 AJA92956.1 - 0.041 13.0 0.2 0.1 11.7 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) Aminotran_1_2 PF00155.16 AJA92959.1 - 2.5e-43 148.4 0.0 3e-43 148.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.8 AJA92959.1 - 2.6e-05 23.0 0.0 3.6e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Allinase UbiD PF01977.11 AJA92960.1 - 2e-148 494.2 0.3 2.4e-148 493.9 0.2 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HTH_24 PF13412.1 AJA92961.1 - 3.5e-06 26.3 0.1 1.1e-05 24.7 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 AJA92961.1 - 5e-05 22.8 0.0 0.00025 20.6 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain B12-binding_2 PF02607.12 AJA92961.1 - 0.00014 21.7 0.0 0.00022 21.1 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain HTH_11 PF08279.7 AJA92961.1 - 0.00015 21.2 0.0 0.00038 20.0 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.1 AJA92961.1 - 0.0016 18.1 0.0 0.025 14.3 0.0 2.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_Mga PF08280.6 AJA92961.1 - 0.0078 15.9 0.1 0.77 9.5 0.0 2.9 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain MarR PF01047.17 AJA92961.1 - 0.019 14.6 0.1 0.048 13.3 0.0 1.6 1 0 0 1 1 1 0 MarR family PAX PF00292.13 AJA92961.1 - 0.047 13.4 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 'Paired box' domain HTH_28 PF13518.1 AJA92961.1 - 0.055 13.4 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.7 AJA92961.1 - 0.078 12.5 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_26 PF13443.1 AJA92961.1 - 0.081 13.1 0.2 0.29 11.3 0.0 2.0 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain NAD_synthase PF02540.12 AJA92962.1 - 1.5e-75 253.2 0.1 1.7e-75 253.0 0.1 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 AJA92962.1 - 5.5e-06 25.1 0.0 0.0014 17.2 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.16 AJA92962.1 - 0.00042 19.9 0.0 0.00082 18.9 0.0 1.5 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.8 AJA92962.1 - 0.0014 17.9 0.0 0.0065 15.7 0.0 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC HTH_25 PF13413.1 AJA92962.1 - 0.021 14.4 1.0 3.2 7.4 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain ATP_bind_3 PF01171.15 AJA92962.1 - 0.025 14.0 0.0 0.046 13.2 0.0 1.5 1 0 0 1 1 1 0 PP-loop family Fe_hyd_lg_C PF02906.9 AJA92962.1 - 0.046 12.9 0.0 0.061 12.5 0.0 1.3 1 0 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain ThiI PF02568.9 AJA92962.1 - 0.076 12.4 0.0 0.98 8.8 0.0 2.3 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Latrotoxin_C PF15658.1 AJA92962.1 - 0.52 10.1 3.8 12 5.7 0.1 3.4 3 1 1 4 4 4 0 Latrotoxin C-terminal domain PsbX PF06596.6 AJA92963.1 - 1.5 8.5 3.9 2.2 8.0 2.7 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) Oxidored_q4 PF00507.14 AJA92964.1 - 3.5e-16 58.8 0.7 4.7e-16 58.4 0.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF805 PF05656.9 AJA92964.1 - 0.13 12.0 1.3 0.54 10.1 0.8 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF805) PGM_PMM_I PF02878.11 AJA92965.1 - 7.9e-24 83.7 0.0 1.9e-23 82.4 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.11 AJA92965.1 - 4.6e-16 58.8 0.2 1.4e-15 57.2 0.1 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.11 AJA92965.1 - 5.4e-14 52.3 0.0 1.1e-13 51.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.15 AJA92965.1 - 8e-08 32.1 0.1 1.7e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhpC-TSA PF00578.16 AJA92966.1 - 1.1e-22 79.9 0.2 1.5e-22 79.5 0.2 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92966.1 - 4.3e-15 55.5 0.1 5.5e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.1 AJA92966.1 - 2.2e-08 34.1 0.2 3.8e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.1 AJA92966.1 - 8e-07 29.2 0.1 1.1e-06 28.7 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain GSHPx PF00255.14 AJA92966.1 - 0.0039 16.5 0.0 0.0064 15.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione peroxidase Thioredoxin PF00085.15 AJA92966.1 - 0.023 14.3 0.3 0.31 10.7 0.1 2.2 1 1 0 2 2 2 0 Thioredoxin T4_deiodinase PF00837.12 AJA92966.1 - 0.062 12.2 0.0 0.09 11.7 0.0 1.2 1 0 0 1 1 1 0 Iodothyronine deiodinase tRNA_int_endo PF01974.12 AJA92967.1 - 1.6e-30 104.7 0.1 3e-30 103.8 0.0 1.4 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 AJA92967.1 - 8.7e-16 57.2 0.0 1.3e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain AIPR PF10592.4 AJA92968.1 - 1.1e-47 162.7 11.8 1.1e-47 162.7 8.2 2.0 2 1 0 2 2 2 1 AIPR protein CYTL1 PF15153.1 AJA92968.1 - 0.047 13.3 0.7 0.11 12.1 0.1 1.9 2 0 0 2 2 2 0 Cytokine-like protein 1 MFS_1 PF07690.11 AJA92970.1 - 0.001 17.9 3.1 0.0013 17.5 2.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily CcmB PF03379.8 AJA92970.1 - 0.045 12.9 5.1 0.12 11.5 1.0 2.0 2 0 0 2 2 2 0 CcmB protein Claudin_2 PF13903.1 AJA92970.1 - 0.14 11.8 1.3 0.25 10.9 0.9 1.6 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF3098 PF11297.3 AJA92970.1 - 0.38 10.5 6.6 0.11 12.2 0.6 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3098) DUF2955 PF11168.3 AJA92970.1 - 0.61 9.7 6.0 0.085 12.5 1.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2955) YesK PF14150.1 AJA92970.1 - 0.81 9.8 5.1 0.37 10.9 0.2 2.5 3 0 0 3 3 3 0 YesK-like protein Monooxygenase_B PF04744.7 AJA92971.1 - 1.1e-07 30.8 0.3 3e-07 29.5 0.0 1.7 2 1 1 3 3 3 1 Monooxygenase subunit B protein tRNA_NucTransf2 PF09249.6 AJA92973.1 - 3.2e-37 126.8 0.1 7e-37 125.8 0.1 1.6 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 AJA92973.1 - 7.7e-11 42.1 0.2 2.1e-10 40.7 0.2 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 AJA92973.1 - 0.05 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm HIT PF01230.18 AJA92974.1 - 1e-07 32.3 0.0 0.0051 17.3 0.0 2.3 2 0 0 2 2 2 2 HIT domain GalP_UDP_transf PF01087.17 AJA92974.1 - 1.7e-06 28.2 0.0 4.8e-06 26.7 0.0 1.7 2 0 0 2 2 2 1 Galactose-1-phosphate uridyl transferase, N-terminal domain DcpS_C PF11969.3 AJA92974.1 - 0.00013 22.1 0.0 0.014 15.5 0.0 2.3 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.12 AJA92974.1 - 0.0018 17.8 0.0 0.0031 17.0 0.0 1.4 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF2002 PF09400.5 AJA92974.1 - 0.055 13.2 0.4 0.89 9.3 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2002) Aldo_ket_red PF00248.16 AJA92975.1 - 6.8e-34 116.9 0.0 3e-33 114.8 0.0 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family Aconitase PF00330.15 AJA92976.1 - 2.1e-163 544.1 0.0 2.4e-163 543.9 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.8 AJA92976.1 - 0.049 12.1 0.0 0.077 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) DUF3901 PF13040.1 AJA92976.1 - 0.093 12.0 0.1 0.23 10.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3901) THUMP PF02926.12 AJA92976.1 - 0.11 12.3 0.0 0.7 9.7 0.0 2.0 2 0 0 2 2 2 0 THUMP domain Fer2_3 PF13085.1 AJA92977.1 - 2.3e-29 101.4 0.1 2.3e-29 101.4 0.1 1.5 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 AJA92977.1 - 2.8e-12 46.4 4.7 7.6e-12 45.0 1.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 AJA92977.1 - 5e-11 42.8 6.5 2.6e-09 37.3 0.5 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 AJA92977.1 - 6.6e-10 39.1 11.9 3e-08 33.8 2.0 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 AJA92977.1 - 1.3e-08 34.4 2.9 1.3e-08 34.4 2.0 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 AJA92977.1 - 2.6e-08 34.0 6.4 2.6e-08 33.9 2.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 AJA92977.1 - 7.6e-08 32.6 4.3 7.6e-08 32.6 3.0 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 AJA92977.1 - 1.2e-05 24.7 0.7 1.2e-05 24.7 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer2 PF00111.22 AJA92977.1 - 2.8e-05 23.7 0.8 6.2e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_2 PF12797.2 AJA92977.1 - 3.3e-05 23.5 1.6 3.3e-05 23.5 1.1 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.1 AJA92977.1 - 4e-05 24.2 3.8 4e-05 24.2 2.6 2.3 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 AJA92977.1 - 0.0026 17.5 1.4 0.0026 17.5 1.0 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_21 PF14697.1 AJA92977.1 - 0.054 13.3 11.3 0.06 13.2 4.8 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 AJA92977.1 - 0.078 13.3 1.8 0.078 13.3 1.2 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.2 AJA92977.1 - 0.15 12.6 0.9 0.15 12.6 0.6 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 AJA92977.1 - 0.2 12.2 0.2 0.2 12.2 0.1 2.8 3 0 0 3 3 2 0 4Fe-4S single cluster domain tRNA-synt_1 PF00133.17 AJA92978.1 - 2.2e-140 468.5 5.3 3.3e-140 467.9 3.7 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 AJA92978.1 - 3e-29 101.7 2.0 9.7e-29 100.1 1.4 1.9 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 AJA92978.1 - 8.2e-26 90.5 4.1 1.2e-09 37.3 0.1 4.4 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 AJA92978.1 - 3.1e-07 29.8 0.2 1.1e-05 24.6 0.0 2.7 3 0 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 AJA92978.1 - 3.1e-06 26.1 0.0 2.8e-05 22.9 0.1 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) Zn-ribbon_8 PF09723.5 AJA92978.1 - 0.23 11.4 1.5 6.9 6.7 0.0 3.3 3 0 0 3 3 3 0 Zinc ribbon domain DHH PF01368.15 AJA92979.1 - 2.8e-09 36.7 0.1 4.5e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 AJA92979.1 - 4.6e-08 32.6 2.8 5.3e-08 32.4 0.3 2.4 2 1 0 2 2 2 1 DHHA1 domain HTH_36 PF13730.1 AJA92980.1 - 0.065 13.3 0.0 0.084 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2310 PF10071.4 AJA92981.1 - 0.042 12.8 0.0 0.047 12.6 0.0 1.2 1 0 0 1 1 1 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DSX_dimer PF08828.5 AJA92981.1 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Doublesex dimerisation domain PPC PF04151.10 AJA92982.1 - 0.0079 17.1 0.0 0.028 15.3 0.0 2.0 1 1 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain TMEMspv1-c74-12 PF11044.3 AJA92982.1 - 0.025 14.1 1.9 0.058 12.9 1.3 1.6 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein NurA PF09376.5 AJA92983.1 - 3.6e-19 69.2 0.1 1.1e-18 67.5 0.1 1.8 1 1 0 1 1 1 1 NurA domain TPP_enzyme_M PF00205.17 AJA92983.1 - 0.081 12.6 0.0 0.18 11.5 0.0 1.5 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Copper-bind PF00127.15 AJA92984.1 - 1.8e-06 28.0 0.0 5.1e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 AJA92984.1 - 0.0007 19.4 0.0 0.0021 17.9 0.0 1.8 2 0 0 2 2 2 1 Cupredoxin-like domain zf-C2H2 PF00096.21 AJA92985.1 - 1.4e-10 40.8 5.1 0.00012 22.2 0.2 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 AJA92985.1 - 3.7e-10 39.4 2.7 0.00057 20.0 0.2 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.3 AJA92985.1 - 1e-06 28.6 2.4 0.011 15.8 0.1 2.4 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.1 AJA92985.1 - 1.4e-06 27.9 3.0 0.014 15.2 0.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.2 AJA92985.1 - 3.9e-05 23.6 1.7 0.039 14.1 0.1 2.3 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_2 PF13465.1 AJA92985.1 - 6.3e-05 23.0 11.4 0.0008 19.5 0.1 3.0 3 0 0 3 3 3 2 Zinc-finger double domain DUF629 PF04780.7 AJA92985.1 - 0.00028 19.5 6.3 0.052 12.0 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF629) zf-C2H2_2 PF12756.2 AJA92985.1 - 0.00036 20.5 6.8 0.063 13.3 1.0 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) Prok-RING_1 PF14446.1 AJA92985.1 - 0.0026 17.4 1.9 0.91 9.3 0.1 2.1 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 zf-BED PF02892.10 AJA92985.1 - 0.0061 16.2 3.3 0.25 11.1 0.7 2.4 1 1 1 2 2 2 1 BED zinc finger zf-H2C2_5 PF13909.1 AJA92985.1 - 0.0097 16.0 9.8 0.13 12.5 0.5 2.6 2 1 0 2 2 2 2 C2H2-type zinc-finger domain Zn-ribbon_8 PF09723.5 AJA92985.1 - 0.013 15.4 2.5 0.079 12.9 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-Di19 PF05605.7 AJA92985.1 - 0.017 15.2 4.7 0.079 13.0 3.2 1.8 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Transpos_assoc PF13963.1 AJA92985.1 - 0.018 15.0 4.8 0.22 11.5 0.3 2.1 1 1 1 2 2 2 0 Transposase-associated domain zf-3CxxC PF13695.1 AJA92985.1 - 0.028 14.6 0.7 0.034 14.3 0.5 1.1 1 0 0 1 1 1 0 Zinc-binding domain Evr1_Alr PF04777.8 AJA92985.1 - 0.046 13.6 4.3 0.49 10.3 0.3 2.1 1 1 1 2 2 2 0 Erv1 / Alr family DUF3505 PF12013.3 AJA92985.1 - 0.074 13.2 2.5 1.7 8.9 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3505) C1_4 PF07975.7 AJA92985.1 - 0.088 12.8 1.2 0.12 12.4 0.8 1.3 1 0 0 1 1 1 0 TFIIH C1-like domain DUF2321 PF10083.4 AJA92985.1 - 0.089 12.2 0.1 0.099 12.1 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-TRAF PF02176.13 AJA92985.1 - 0.091 13.1 3.1 4.8 7.6 0.1 2.1 1 1 1 2 2 2 0 TRAF-type zinc finger zf-DBF PF07535.7 AJA92985.1 - 0.13 11.9 5.0 0.7 9.6 0.2 2.2 2 0 0 2 2 2 0 DBF zinc finger zf-AN1 PF01428.11 AJA92985.1 - 0.25 11.2 0.2 0.25 11.2 0.1 2.4 3 0 0 3 3 2 0 AN1-like Zinc finger YhfH PF14149.1 AJA92985.1 - 0.59 9.9 3.8 0.91 9.3 0.1 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-C2H2_3 PF13878.1 AJA92985.1 - 0.61 9.6 5.1 5.6 6.6 0.0 2.6 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO PDDEXK_1 PF12705.2 AJA92986.1 - 2.2e-08 33.8 0.1 9.7e-07 28.4 0.0 2.2 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Dna2 PF08696.6 AJA92986.1 - 0.0027 17.0 0.0 0.0065 15.7 0.0 1.5 1 1 0 1 1 1 1 DNA replication factor Dna2 Oxidored_q1 PF00361.15 AJA92987.1 - 1.4e-59 201.5 20.5 1.4e-59 201.5 14.2 3.1 2 1 1 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains DUF4112 PF13430.1 AJA92988.1 - 0.1 12.5 0.3 0.14 12.0 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4112) Thioredoxin PF00085.15 AJA92989.1 - 1e-29 102.2 0.0 1.1e-29 102.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 AJA92989.1 - 1.7e-11 44.0 0.2 4.4e-08 33.1 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.1 AJA92989.1 - 5.8e-11 42.5 0.1 1.9e-10 40.8 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.1 AJA92989.1 - 1.1e-07 31.8 0.1 1.5e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.16 AJA92989.1 - 3.8e-06 26.5 0.0 4.7e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 AJA92989.1 - 6e-06 25.8 0.0 7.2e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_9 PF14595.1 AJA92989.1 - 0.00011 21.8 0.0 0.00012 21.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.1 AJA92989.1 - 0.00011 21.9 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain HyaE PF07449.6 AJA92989.1 - 0.0027 17.5 0.0 0.0037 17.1 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TraF PF13728.1 AJA92989.1 - 0.0053 16.2 0.0 0.0064 16.0 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_6 PF13848.1 AJA92989.1 - 0.0069 16.2 0.0 0.0096 15.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DUF953 PF06110.6 AJA92989.1 - 0.02 14.3 0.3 0.061 12.7 0.2 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Thioredoxin_4 PF13462.1 AJA92989.1 - 0.054 13.4 0.0 0.38 10.7 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin NIL PF09383.5 AJA92989.1 - 0.058 12.9 0.0 0.098 12.2 0.0 1.3 1 0 0 1 1 1 0 NIL domain Ribosomal_L7Ae PF01248.21 AJA92990.1 - 1e-10 40.9 0.4 1.2e-10 40.7 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DEAD PF00270.24 AJA92991.1 - 1.2e-47 161.5 0.2 1.2e-44 151.7 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.26 AJA92991.1 - 5.1e-25 87.1 0.1 2.6e-24 84.8 0.1 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain CMS1 PF14617.1 AJA92991.1 - 0.00018 20.6 0.3 0.0025 16.9 0.0 2.4 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit ResIII PF04851.10 AJA92991.1 - 0.00061 19.6 0.0 0.0015 18.3 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 AJA92991.1 - 0.00084 18.2 0.0 0.0015 17.3 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_RecD PF05127.9 AJA92991.1 - 0.016 14.8 0.0 0.051 13.1 0.0 1.7 2 0 0 2 2 2 0 Helicase AAA_30 PF13604.1 AJA92991.1 - 0.019 14.5 0.1 0.062 12.8 0.1 1.8 1 1 0 1 1 1 0 AAA domain SANTA PF09133.5 AJA92991.1 - 0.072 13.0 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 SANTA (SANT Associated) SecA_DEAD PF07517.9 AJA92991.1 - 0.11 11.7 0.7 0.22 10.8 0.5 1.5 1 1 0 1 1 1 0 SecA DEAD-like domain CBS PF00571.23 AJA92992.1 - 1.7e-28 98.1 0.1 8.4e-15 54.2 0.0 2.1 2 0 0 2 2 2 2 CBS domain Rhabdo_ncap_2 PF03216.8 AJA92992.1 - 0.042 12.5 0.3 0.043 12.5 0.2 1.1 1 0 0 1 1 1 0 Rhabdovirus nucleoprotein DUF2920 PF11144.3 AJA92993.1 - 0.024 13.6 0.1 0.026 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2920) Beach PF02138.13 AJA92994.1 - 0.063 12.7 0.5 0.077 12.4 0.4 1.2 1 0 0 1 1 1 0 Beige/BEACH domain DUF2203 PF09969.4 AJA92995.1 - 3.1e-37 127.4 0.8 3.5e-37 127.2 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) DUF3585 PF12130.3 AJA92995.1 - 0.027 14.3 1.5 0.037 13.8 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3585) CbiC PF02570.10 AJA92996.1 - 6.2e-73 244.4 0.1 7e-73 244.2 0.0 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase tRNA-Thr_ED PF08915.6 AJA92998.1 - 9.6e-47 158.4 0.0 1.8e-46 157.5 0.0 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 AJA92998.1 - 3.7e-24 85.2 0.8 8.9e-24 83.9 0.5 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 AJA92998.1 - 6.9e-24 83.6 1.3 1.5e-23 82.5 0.9 1.6 1 0 0 1 1 1 1 Anticodon binding domain Voltage_CLC PF00654.15 AJA92999.1 - 0.19 10.7 1.0 0.23 10.4 0.7 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel Gly-zipper_Omp PF13488.1 AJA92999.1 - 9.8 5.9 12.6 0.44 10.2 1.7 2.2 1 1 1 2 2 2 0 Glycine zipper DUF4539 PF15072.1 AJA93000.1 - 0.022 14.4 0.1 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4539) Glycos_transf_4 PF00953.16 AJA93001.1 - 6.4e-26 91.0 17.3 6.4e-26 91.0 12.0 2.1 3 0 0 3 3 3 1 Glycosyl transferase family 4 TruD PF01142.13 AJA93002.1 - 2.3e-58 197.6 0.0 2.8e-58 197.4 0.0 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Flavoprotein PF02441.14 AJA93003.1 - 4.9e-29 100.6 0.6 7.9e-29 99.9 0.4 1.3 1 0 0 1 1 1 1 Flavoprotein Y_phosphatase PF00102.22 AJA93003.1 - 0.031 13.6 0.0 0.039 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Bap31 PF05529.7 AJA93004.1 - 0.012 15.0 0.2 0.017 14.5 0.1 1.3 1 0 0 1 1 1 0 B-cell receptor-associated protein 31-like Halogen_Hydrol PF10112.4 AJA93004.1 - 0.016 14.6 0.3 0.032 13.6 0.2 1.5 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2254 PF10011.4 AJA93004.1 - 0.035 12.5 0.0 0.035 12.5 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF641 PF04859.7 AJA93004.1 - 0.061 13.0 1.0 0.083 12.6 0.7 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Tup_N PF08581.5 AJA93004.1 - 0.093 12.9 5.6 0.23 11.6 1.2 2.2 1 1 1 2 2 2 0 Tup N-terminal DUF2730 PF10805.3 AJA93004.1 - 0.099 12.3 1.3 0.68 9.6 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Iron_permease PF04120.7 AJA93004.1 - 0.21 11.2 1.8 0.36 10.4 1.2 1.3 1 1 0 1 1 1 0 Low affinity iron permease TPP_enzyme_C PF02775.16 AJA93005.1 - 3.2e-29 101.4 0.2 5.1e-29 100.8 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 AJA93005.1 - 9.6e-08 31.8 1.6 4e-05 23.4 1.1 3.0 1 1 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal ComX PF05952.7 AJA93005.1 - 0.23 10.9 1.6 2.3 7.7 0.3 2.4 2 0 0 2 2 2 0 Bacillus competence pheromone ComX Cu-oxidase_3 PF07732.10 AJA93006.1 - 9.6e-26 89.8 5.5 3.6e-22 78.2 0.2 2.2 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.9 AJA93006.1 - 8.9e-20 70.6 11.0 1.5e-09 37.4 0.8 3.2 3 0 0 3 3 3 3 Multicopper oxidase Cupredoxin_1 PF13473.1 AJA93006.1 - 0.0073 16.1 0.0 0.17 11.8 0.0 2.6 3 0 0 3 3 3 1 Cupredoxin-like domain Acetyltransf_4 PF13420.1 AJA93007.1 - 4.6e-20 72.1 3.0 5.3e-20 71.9 2.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 AJA93007.1 - 5e-15 55.9 0.4 6.2e-15 55.6 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 AJA93007.1 - 1.2e-05 25.1 0.0 1.8e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Chitin_synth_1 PF01644.12 AJA93007.1 - 0.04 13.7 0.0 0.092 12.5 0.0 1.5 1 0 0 1 1 1 0 Chitin synthase Ribosomal_L4 PF00573.17 AJA93008.1 - 9.7e-44 149.0 0.8 1.1e-43 148.8 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ferritin PF00210.19 AJA93009.1 - 0.0025 17.5 1.1 0.0025 17.5 0.7 1.0 1 0 0 1 1 1 1 Ferritin-like domain Glyoxalase_4 PF13669.1 AJA93010.1 - 2e-21 76.0 0.0 2.3e-21 75.8 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.20 AJA93010.1 - 2.4e-08 33.9 0.0 2.7e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.1 AJA93010.1 - 2.3e-06 27.6 0.0 2.8e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.2 AJA93010.1 - 9.5e-06 26.1 0.0 1.9e-05 25.1 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain DUF126 PF01989.11 AJA93011.1 - 6e-28 96.3 0.1 8.5e-28 95.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 PEP-utilizers PF00391.18 AJA93011.1 - 0.052 13.1 0.1 0.11 12.0 0.0 1.7 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain Ribosomal_S19e PF01090.14 AJA93012.1 - 2e-47 160.1 0.0 2.3e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Hjc PF01870.13 AJA93013.1 - 0.019 14.5 0.0 0.039 13.5 0.0 1.5 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) Carb_kinase PF01256.12 AJA93014.1 - 1.2e-44 152.4 0.1 1.4e-44 152.2 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate kinase HK PF02110.10 AJA93014.1 - 7.4e-08 31.8 0.0 1.1e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 AJA93014.1 - 3.6e-05 23.0 0.2 9.1e-05 21.7 0.1 1.7 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase KOW PF00467.24 AJA93015.1 - 0.0012 18.5 1.2 0.017 14.8 0.6 2.4 2 0 0 2 2 2 1 KOW motif HTH_45 PF14947.1 AJA93016.1 - 9.5e-13 47.7 1.0 1.3e-12 47.3 0.7 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 AJA93016.1 - 3.6e-05 23.3 0.1 5e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 AJA93016.1 - 7.4e-05 22.3 0.0 0.00011 21.8 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 AJA93016.1 - 0.00072 18.8 0.2 0.00095 18.5 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 AJA93016.1 - 0.00079 19.7 0.0 0.00096 19.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Mrr_N PF14338.1 AJA93016.1 - 0.0011 19.0 0.0 0.0013 18.7 0.0 1.1 1 0 0 1 1 1 1 Mrr N-terminal domain Rio2_N PF09202.6 AJA93016.1 - 0.0011 18.9 0.1 0.0013 18.7 0.0 1.1 1 0 0 1 1 1 1 Rio2, N-terminal MarR PF01047.17 AJA93016.1 - 0.0017 18.0 0.2 0.0025 17.5 0.1 1.3 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 AJA93016.1 - 0.0039 17.2 0.2 0.0049 16.9 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator RNA_pol_Rpc34 PF05158.7 AJA93016.1 - 0.0049 16.0 0.1 0.0054 15.9 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit DUF2250 PF10007.4 AJA93016.1 - 0.0061 16.4 0.2 0.025 14.5 0.1 1.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) Penicillinase_R PF03965.11 AJA93016.1 - 0.007 16.4 0.0 0.0079 16.2 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.5 AJA93016.1 - 0.0081 15.7 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain RPA_C PF08784.6 AJA93016.1 - 0.023 15.0 0.1 0.032 14.6 0.1 1.2 1 0 0 1 1 1 0 Replication protein A C terminal Mga PF05043.8 AJA93016.1 - 0.033 14.4 1.2 0.072 13.3 0.2 1.9 1 1 1 2 2 2 0 Mga helix-turn-helix domain RP-C PF03428.8 AJA93016.1 - 0.034 13.6 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_26 PF13443.1 AJA93016.1 - 0.036 14.2 0.1 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Cdc6_C PF09079.6 AJA93016.1 - 0.051 13.3 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 CDC6, C terminal DUF2067 PF09840.4 AJA93016.1 - 0.075 12.5 0.1 0.091 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) FeoC PF09012.5 AJA93016.1 - 0.08 12.6 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_34 PF13601.1 AJA93016.1 - 0.086 12.8 0.2 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.9 AJA93016.1 - 0.095 12.4 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2247 PF10004.4 AJA93016.1 - 0.13 11.9 0.1 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2247) NUMOD1 PF07453.8 AJA93016.1 - 0.34 10.8 0.2 0.34 10.8 0.2 2.1 2 1 0 2 2 2 0 NUMOD1 domain CbtA PF09490.5 AJA93018.1 - 1.3e-15 57.3 2.2 1.7e-15 56.9 1.5 1.1 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) DUF1113 PF06541.6 AJA93018.1 - 0.049 13.3 1.1 0.049 13.3 0.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1113) NUDIX PF00293.23 AJA93019.1 - 1.8e-18 66.5 0.0 2.1e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.1 AJA93019.1 - 0.03 13.6 0.0 0.047 13.0 0.0 1.3 1 1 0 1 1 1 0 Nucleotide hydrolase DHO_dh PF01180.16 AJA93020.1 - 1.5e-54 184.9 1.0 1.7e-54 184.7 0.7 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase His_biosynth PF00977.16 AJA93020.1 - 5.1e-06 25.9 0.1 0.01 15.1 0.0 2.4 2 0 0 2 2 2 2 Histidine biosynthesis protein Dus PF01207.12 AJA93020.1 - 0.00025 19.9 0.0 0.029 13.2 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) IMPDH PF00478.20 AJA93020.1 - 0.00047 19.1 1.3 0.00097 18.1 0.1 2.0 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.10 AJA93020.1 - 0.014 14.5 0.5 0.049 12.7 0.4 1.7 1 1 0 1 1 1 0 Nitronate monooxygenase DUF561 PF04481.7 AJA93020.1 - 0.056 12.3 7.9 0.47 9.3 3.4 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF561) UPF0051 PF01458.12 AJA93021.1 - 1.1e-68 231.1 0.4 1.5e-68 230.7 0.3 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Pico_P1A PF02226.11 AJA93021.1 - 0.24 11.1 1.6 3 7.6 0.1 3.0 3 0 0 3 3 3 0 Picornavirus coat protein (VP4) STT3 PF02516.9 AJA93022.1 - 1.4e-40 139.7 40.2 2.3e-40 138.9 27.8 1.3 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4481 PF14800.1 AJA93022.1 - 0.17 10.7 0.8 0.3 9.9 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Glyco_trans_1_3 PF13528.1 AJA93023.1 - 2.6e-09 36.7 0.0 1.1e-06 28.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 1 DUF2774 PF11242.3 AJA93023.1 - 0.047 13.6 0.8 5.1 7.1 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) Baculo_p48 PF04878.8 AJA93023.1 - 0.069 12.0 0.4 1.2 8.0 0.1 2.2 2 1 0 2 2 2 0 Baculovirus P48 protein MttA_Hcf106 PF02416.11 AJA93024.1 - 4.7e-10 38.4 3.0 7.5e-10 37.7 2.1 1.3 1 1 0 1 1 1 1 mttA/Hcf106 family Sulfotransfer_1 PF00685.22 AJA93025.1 - 3.4e-16 59.2 2.3 3.9e-16 59.1 1.6 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.1 AJA93025.1 - 6.2e-05 23.9 0.0 0.00013 22.9 0.0 1.6 1 1 0 1 1 1 1 Sulfotransferase family Y_phosphatase PF00102.22 AJA93025.1 - 0.0022 17.3 0.4 0.0035 16.6 0.3 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase T5orf172 PF10544.4 AJA93025.1 - 0.044 14.1 2.6 1.4 9.3 0.1 2.4 2 0 0 2 2 2 0 T5orf172 domain CSD PF00313.17 AJA93026.1 - 1.4e-22 79.2 3.8 1.5e-22 79.1 2.6 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.6 AJA93026.1 - 5e-08 32.3 0.5 5.2e-08 32.2 0.4 1.1 1 0 0 1 1 1 1 Ribonuclease B OB domain S1_2 PF13509.1 AJA93026.1 - 0.061 13.2 0.1 0.067 13.1 0.0 1.2 1 0 0 1 1 1 0 S1 domain TPR_11 PF13414.1 AJA93027.1 - 1.3e-28 98.4 0.0 8.4e-10 38.1 0.0 2.6 1 1 2 3 3 3 3 TPR repeat TPR_1 PF00515.23 AJA93027.1 - 8.4e-22 75.8 0.4 1.2e-05 24.6 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.12 AJA93027.1 - 2e-16 58.4 0.0 2.4e-05 23.8 0.0 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_6 PF13174.1 AJA93027.1 - 1.6e-12 47.0 0.0 0.0045 17.3 0.0 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat Apc3 PF12895.2 AJA93027.1 - 2e-11 43.8 0.0 8.2e-05 22.6 0.0 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.1 AJA93027.1 - 2.1e-11 42.7 1.1 0.0048 16.5 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 AJA93027.1 - 3.7e-11 43.1 0.1 6.6e-05 23.1 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 AJA93027.1 - 6.8e-11 41.8 0.0 4.2e-05 23.8 0.0 4.0 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.1 AJA93027.1 - 8.2e-11 41.2 0.0 2e-05 24.4 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.1 AJA93027.1 - 1e-10 41.9 0.0 5e-05 23.8 0.0 3.1 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.1 AJA93027.1 - 7e-10 38.7 0.0 0.0052 16.6 0.0 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.1 AJA93027.1 - 2.9e-07 29.7 0.0 0.024 14.3 0.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA93027.1 - 1.5e-05 24.8 0.1 0.37 10.6 0.0 3.9 3 1 1 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.1 AJA93027.1 - 0.00085 19.1 0.0 0.52 10.2 0.0 2.4 1 1 2 3 3 3 3 Tetratricopeptide repeat PPR PF01535.15 AJA93027.1 - 0.0016 18.3 0.6 2.4 8.3 0.0 3.7 3 0 0 3 3 3 1 PPR repeat TPR_20 PF14561.1 AJA93027.1 - 0.0067 16.5 0.0 4.6 7.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_15 PF13429.1 AJA93027.1 - 0.026 13.6 0.0 0.72 8.8 0.0 2.2 1 1 0 2 2 2 0 Tetratricopeptide repeat DS PF01916.12 AJA93028.1 - 1.5e-79 267.2 0.1 1.8e-79 266.9 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Hpre_diP_synt_I PF07456.6 AJA93028.1 - 0.15 11.9 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I TFIIE_alpha PF02002.12 AJA93029.1 - 1.2e-19 69.7 0.8 1.2e-19 69.7 0.6 1.4 2 0 0 2 2 2 1 TFIIE alpha subunit TrmB PF01978.14 AJA93029.1 - 0.0012 18.5 0.0 0.0021 17.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 AJA93029.1 - 0.059 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator zf-ribbon_3 PF13248.1 AJA93029.1 - 0.075 12.2 0.5 0.19 10.9 0.0 1.8 2 0 0 2 2 2 0 zinc-ribbon domain DNA_ligase_ZBD PF03119.11 AJA93029.1 - 0.26 10.9 0.0 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain AIRC PF00731.15 AJA93030.1 - 2.4e-23 82.0 4.7 3.3e-23 81.6 3.3 1.2 1 0 0 1 1 1 1 AIR carboxylase NAD_kinase PF01513.16 AJA93030.1 - 0.01 14.6 0.0 0.021 13.6 0.0 1.5 1 1 0 1 1 1 0 ATP-NAD kinase DUF835 PF05763.7 AJA93030.1 - 0.082 12.4 0.5 1.1 8.7 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF835) Rtt106 PF08512.7 AJA93030.1 - 0.092 12.7 0.2 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Histone chaperone Rttp106-like AF0941-like PF14591.1 AJA93030.1 - 0.28 11.2 3.6 0.51 10.3 2.5 1.5 1 1 0 1 1 1 0 AF0941-like Shikimate_dh_N PF08501.6 AJA93031.1 - 2.5e-28 97.9 0.0 7.1e-28 96.4 0.0 1.8 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 AJA93031.1 - 6.3e-16 58.7 0.2 9.8e-16 58.0 0.1 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 AJA93031.1 - 0.00026 20.1 0.0 0.00036 19.6 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase F420_oxidored PF03807.12 AJA93031.1 - 0.05 14.0 0.1 0.085 13.2 0.1 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF2661 PF10860.3 AJA93031.1 - 0.061 13.4 0.1 0.92 9.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2661) DUF2338 PF10100.4 AJA93031.1 - 0.092 11.0 0.0 0.13 10.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2338) COX15-CtaA PF02628.10 AJA93032.1 - 1.7e-27 96.0 10.4 2.2e-27 95.7 7.2 1.1 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein PseudoU_synth_2 PF00849.17 AJA93032.1 - 0.11 12.3 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 RNA pseudouridylate synthase DUF4418 PF14387.1 AJA93032.1 - 3.4 7.4 7.1 1.4 8.6 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) Ni_hydr_CYTB PF01292.15 AJA93032.1 - 4.6 6.5 9.0 16 4.8 6.2 1.8 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 DUF998 PF06197.8 AJA93032.1 - 6.1 6.1 17.7 0.26 10.5 7.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF998) YesK PF14150.1 AJA93032.1 - 6.7 6.8 12.0 0.22 11.6 0.7 2.7 2 1 0 2 2 2 0 YesK-like protein Ribosomal_S13 PF00416.17 AJA93033.1 - 3.2e-29 101.4 0.1 3.8e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 H2TH PF06831.9 AJA93033.1 - 0.0075 15.9 0.0 0.016 14.9 0.0 1.5 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase H2TH domain RMMBL PF07521.7 AJA93034.1 - 3.4e-06 26.7 0.0 1.9e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 RNA-metabolising metallo-beta-lactamase DRMBL PF07522.9 AJA93034.1 - 0.0022 18.0 0.1 0.0049 16.9 0.1 1.5 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase Lactamase_B_2 PF12706.2 AJA93034.1 - 0.003 17.1 3.9 1.8 8.1 2.3 3.0 2 1 0 2 2 2 2 Beta-lactamase superfamily domain SRP19 PF01922.12 AJA93035.1 - 7.3e-18 64.9 0.2 8.8e-18 64.6 0.1 1.1 1 0 0 1 1 1 1 SRP19 protein MFS_1 PF07690.11 AJA93036.1 - 1.2e-35 122.9 43.0 8.4e-25 87.2 18.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 AJA93036.1 - 1.7e-05 23.1 7.1 2.2e-05 22.7 4.9 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector PUCC PF03209.10 AJA93036.1 - 0.0025 16.6 14.1 0.021 13.5 6.6 2.7 1 1 0 2 2 2 2 PUCC protein QCR10 PF09796.4 AJA93036.1 - 0.063 12.9 1.0 0.18 11.4 0.4 2.1 1 1 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) UNC-93 PF05978.11 AJA93036.1 - 0.6 9.5 18.4 0.04 13.4 0.7 3.1 2 2 1 3 3 3 0 Ion channel regulatory protein UNC-93 Epimerase PF01370.16 AJA93037.1 - 4.4e-56 189.9 0.0 5.2e-56 189.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 AJA93037.1 - 7e-17 61.2 0.0 6e-16 58.1 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 AJA93037.1 - 3.8e-15 55.3 0.0 5.5e-15 54.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 AJA93037.1 - 5.5e-11 42.8 0.0 1.4e-10 41.4 0.0 1.6 2 0 0 2 2 2 1 NADH(P)-binding RmlD_sub_bind PF04321.12 AJA93037.1 - 1.5e-10 40.4 0.0 2e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 AJA93037.1 - 3.3e-10 39.3 0.0 2.2e-08 33.3 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.20 AJA93037.1 - 0.0013 18.6 0.0 0.0051 16.7 0.0 2.0 2 0 0 2 2 2 1 short chain dehydrogenase NmrA PF05368.8 AJA93037.1 - 0.021 14.1 0.0 0.035 13.3 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family Bac_luciferase PF00296.15 AJA93038.1 - 3.2e-50 171.0 0.0 3.8e-50 170.7 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Staph_haemo PF05480.6 AJA93038.1 - 0.49 10.1 3.4 31 4.3 0.1 3.3 1 1 2 3 3 3 0 Staphylococcus haemolytic protein AAA PF00004.24 AJA93039.1 - 9.7e-13 48.4 0.0 5.1e-12 46.1 0.0 2.1 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 AJA93039.1 - 2.5e-10 39.6 1.6 4.5e-05 22.3 0.1 2.9 2 1 1 3 3 3 2 Rad17 cell cycle checkpoint protein RuvB_N PF05496.7 AJA93039.1 - 7.7e-08 31.6 0.0 1.2e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 AJA93039.1 - 6.5e-07 29.2 0.2 3.5e-06 26.9 0.0 2.3 2 1 1 3 3 3 1 AAA domain AAA_17 PF13207.1 AJA93039.1 - 9e-06 26.5 0.0 2.6e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 AJA93039.1 - 4.1e-05 23.7 0.3 0.16 12.0 0.2 2.8 2 1 1 3 3 3 2 AAA domain AAA_18 PF13238.1 AJA93039.1 - 0.0046 17.2 0.1 0.018 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_2 PF07724.9 AJA93039.1 - 0.0065 16.3 0.0 0.027 14.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_24 PF13479.1 AJA93039.1 - 0.0076 15.8 0.0 0.016 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 AJA93039.1 - 0.028 13.8 0.1 0.14 11.5 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.1 AJA93039.1 - 0.033 14.1 0.0 0.099 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_4 PF01902.12 AJA93039.1 - 0.056 12.7 0.0 0.097 12.0 0.0 1.4 1 0 0 1 1 1 0 ATP-binding region AAA_5 PF07728.9 AJA93039.1 - 0.057 13.1 0.1 0.2 11.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.1 AJA93039.1 - 0.065 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 AJA93039.1 - 0.18 11.5 0.0 0.37 10.5 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain NTPase_1 PF03266.10 AJA93039.1 - 0.21 11.2 0.8 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 NTPase DUF1212 PF06738.7 AJA93040.1 - 0.014 14.8 0.3 0.017 14.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) 7TMR-DISM_7TM PF07695.6 AJA93040.1 - 0.029 14.0 4.1 0.032 13.8 2.9 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling Herpes_glycop PF01528.11 AJA93040.1 - 0.046 12.4 0.1 0.053 12.2 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein M DUF2207 PF09972.4 AJA93040.1 - 2.2 6.7 4.4 3.5 6.1 3.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) ThiF PF00899.16 AJA93041.1 - 1.9e-46 157.2 1.0 3.4e-46 156.4 0.7 1.5 1 0 0 1 1 1 1 ThiF family MoeZ_MoeB PF05237.8 AJA93041.1 - 3.3e-16 58.6 0.1 6.5e-16 57.6 0.0 1.5 1 0 0 1 1 1 1 MoeZ/MoeB domain ThiS PF02597.15 AJA93041.1 - 2.2e-10 40.8 0.0 8.3e-10 38.9 0.0 2.0 2 0 0 2 2 2 1 ThiS family Shikimate_DH PF01488.15 AJA93041.1 - 0.00033 20.7 0.2 0.0015 18.5 0.1 2.1 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 AJA93041.1 - 0.0042 17.3 0.2 0.012 15.8 0.2 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.14 AJA93041.1 - 0.045 12.8 0.0 0.083 12.0 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.9 AJA93041.1 - 0.064 12.6 0.1 1.4 8.2 0.1 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Acetyltransf_1 PF00583.19 AJA93042.1 - 6.3e-14 51.7 0.0 8.2e-14 51.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 AJA93042.1 - 5.7e-13 48.8 0.1 7.9e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 AJA93042.1 - 1.1e-09 38.4 0.0 1.2e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 AJA93042.1 - 1.1e-06 28.5 0.0 1.2e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 AJA93042.1 - 6.3e-05 22.7 0.0 9.7e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.5 AJA93042.1 - 0.00049 19.7 0.1 0.0017 18.0 0.1 1.8 1 1 0 1 1 1 1 FR47-like protein Nop10p PF04135.7 AJA93043.1 - 3e-24 84.4 3.2 3.2e-24 84.3 2.2 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.10 AJA93043.1 - 0.029 13.7 1.2 0.035 13.5 0.9 1.1 1 0 0 1 1 1 0 RecR protein PolC_DP2 PF03833.8 AJA93043.1 - 0.031 11.9 1.0 0.029 12.0 0.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 NOB1_Zn_bind PF08772.6 AJA93043.1 - 0.041 13.7 0.8 0.049 13.4 0.5 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.2 AJA93043.1 - 0.092 12.5 2.0 0.13 12.1 1.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.5 AJA93043.1 - 0.17 11.3 3.0 6.8 6.2 0.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-B_box PF00643.19 AJA93043.1 - 0.17 11.7 3.7 0.22 11.4 2.5 1.2 1 0 0 1 1 1 0 B-box zinc finger zf-ribbon_3 PF13248.1 AJA93043.1 - 0.35 10.1 4.3 0.74 9.1 3.0 1.8 1 1 0 1 1 1 0 zinc-ribbon domain zf-tcix PF14952.1 AJA93043.1 - 1.8 7.9 5.6 4.2 6.7 3.9 1.7 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding zf-H2C2_2 PF13465.1 AJA93043.1 - 2.8 8.4 7.1 6.2 7.2 1.5 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2 PF00096.21 AJA93043.1 - 5.3 7.5 6.7 5.5 7.5 0.9 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF3837 PF12939.2 AJA93044.1 - 0.0089 16.0 2.3 0.0089 16.0 1.6 3.6 1 1 4 5 5 5 1 Domain of unknown function (DUF3837) IncA PF04156.9 AJA93044.1 - 0.083 12.4 42.4 0.047 13.2 13.5 2.5 1 1 1 2 2 2 0 IncA protein Reo_sigmaC PF04582.7 AJA93044.1 - 0.14 11.3 9.4 0.032 13.4 3.3 1.8 1 1 1 2 2 2 0 Reovirus sigma C capsid protein ERM PF00769.14 AJA93044.1 - 1.3 8.5 42.4 0.64 9.5 4.2 2.5 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Spc7 PF08317.6 AJA93044.1 - 1.9 7.0 49.1 21 3.6 21.6 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein CorA PF01544.13 AJA93044.1 - 2.2 7.2 22.9 0.98 8.3 6.5 2.1 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein CALCOCO1 PF07888.6 AJA93044.1 - 2.8 6.1 34.2 0.43 8.8 20.6 1.6 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Prefoldin_2 PF01920.15 AJA93044.1 - 3.7 7.3 49.2 0.16 11.7 4.2 4.8 2 1 3 5 5 5 0 Prefoldin subunit DUF3584 PF12128.3 AJA93044.1 - 4.6 4.4 37.5 20 2.3 26.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) LMBR1 PF04791.11 AJA93044.1 - 5.9 5.3 27.5 3.8 5.9 1.2 2.5 1 1 1 2 2 2 0 LMBR1-like membrane protein DUF745 PF05335.8 AJA93044.1 - 5.9 6.3 23.5 6.1 6.3 10.3 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF745) TBCA PF02970.11 AJA93044.1 - 6.7 6.8 36.1 1 9.4 1.6 3.6 1 1 3 4 4 4 0 Tubulin binding cofactor A AAA_13 PF13166.1 AJA93044.1 - 7.2 4.9 44.6 24 3.2 31.0 1.7 1 1 0 1 1 1 0 AAA domain WXG100 PF06013.7 AJA93044.1 - 8.4 6.4 8.5 39 4.3 0.1 3.9 4 1 0 4 4 4 0 Proteins of 100 residues with WXG LTD PF00932.14 AJA93045.1 - 3.1e-08 33.6 3.7 3.4e-08 33.5 0.3 2.9 3 0 0 3 3 3 1 Lamin Tail Domain A2M_N PF01835.14 AJA93045.1 - 5.6e-08 32.9 4.7 0.5 10.6 0.0 7.3 7 2 0 7 7 7 3 MG2 domain Arrestin_C PF02752.17 AJA93045.1 - 3.2e-05 24.0 2.3 6.3 6.8 0.0 5.1 5 0 0 5 5 5 2 Arrestin (or S-antigen), C-terminal domain Semialdhyde_dhC PF02774.13 AJA93046.1 - 2.3e-32 112.3 0.0 4.1e-32 111.5 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 AJA93046.1 - 6.9e-28 97.3 0.1 2.2e-27 95.7 0.0 1.8 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.15 AJA93046.1 - 0.015 15.2 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DXP_reductoisom PF02670.11 AJA93046.1 - 0.028 14.9 0.0 0.069 13.6 0.0 1.7 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Gp_dh_C PF02800.15 AJA93046.1 - 0.076 12.4 0.2 2.1 7.7 0.0 2.4 3 0 0 3 3 3 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Hpr_kinase_C PF07475.7 AJA93047.1 - 0.11 11.8 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain DNA_binding_1 PF01035.15 AJA93048.1 - 4.1e-30 103.3 0.0 4.6e-30 103.1 0.0 1.0 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain SprT-like PF10263.4 AJA93049.1 - 0.0004 20.0 0.0 0.00046 19.8 0.0 1.1 1 0 0 1 1 1 1 SprT-like family Peptidase_M76 PF09768.4 AJA93049.1 - 0.001 18.5 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase M76 family DUF45 PF01863.12 AJA93049.1 - 0.0016 18.3 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF45 Peptidase_MA_2 PF13485.1 AJA93049.1 - 0.089 12.8 0.0 0.15 12.1 0.0 1.3 1 1 0 1 1 1 0 Peptidase MA superfamily MCM PF00493.18 AJA93051.1 - 2.6e-126 420.8 0.2 3.6e-126 420.4 0.1 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 AJA93051.1 - 7.8e-16 58.6 1.0 3.5e-15 56.5 0.2 2.5 3 0 0 3 3 3 1 MCM N-terminal domain AAA_5 PF07728.9 AJA93051.1 - 1.1e-05 25.1 0.0 0.00049 19.8 0.0 2.9 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.16 AJA93051.1 - 1.7e-05 24.0 0.0 0.00083 18.5 0.0 2.6 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.6 AJA93051.1 - 0.0098 15.4 0.2 0.036 13.6 0.0 2.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF2786 PF10979.3 AJA93051.1 - 0.02 14.5 0.4 0.051 13.2 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2786) DALR_1 PF05746.10 AJA93051.1 - 0.51 10.3 2.7 6.7 6.7 0.0 3.2 3 0 0 3 3 3 0 DALR anticodon binding domain ABC-3 PF00950.12 AJA93052.1 - 5e-67 225.8 37.9 5.7e-67 225.7 26.2 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.13 AJA93052.1 - 2.4e-05 23.3 34.7 2.4e-05 23.3 24.0 1.9 1 1 1 2 2 2 1 FecCD transport family Flagellin_D3 PF08884.6 AJA93053.1 - 0.1 12.8 0.2 0.12 12.5 0.2 1.2 1 0 0 1 1 1 0 Flagellin D3 domain tRNA-synt_2c PF01411.14 AJA93053.1 - 0.12 10.6 0.1 0.15 10.3 0.1 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (A) zf-C2H2 PF00096.21 AJA93054.1 - 0.00029 20.9 0.4 0.0005 20.2 0.3 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-BED PF02892.10 AJA93054.1 - 0.0015 18.2 0.2 0.0025 17.5 0.2 1.3 1 0 0 1 1 1 1 BED zinc finger zf-C2H2_2 PF12756.2 AJA93054.1 - 0.017 15.2 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.1 AJA93054.1 - 0.032 14.5 0.1 0.052 13.8 0.1 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_3 PF13878.1 AJA93054.1 - 0.057 12.9 0.8 0.073 12.6 0.1 1.5 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF629 PF04780.7 AJA93054.1 - 0.13 10.7 0.1 0.13 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) zf-H2C2_2 PF13465.1 AJA93054.1 - 0.29 11.5 3.4 1.7 9.1 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain DUF1049 PF06305.6 AJA93055.1 - 0.0077 15.6 1.4 0.77 9.2 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1049) Yip1 PF04893.12 AJA93055.1 - 0.024 14.1 1.4 0.027 13.9 1.0 1.0 1 0 0 1 1 1 0 Yip1 domain DUF1191 PF06697.7 AJA93055.1 - 0.035 12.9 0.0 0.035 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1191) DUF1691 PF07950.6 AJA93055.1 - 0.037 13.9 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) Topoisom_I_N PF02919.10 AJA93056.1 - 1.7e-64 217.0 10.5 1.7e-64 217.0 7.3 2.5 2 0 0 2 2 2 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topoisom_I PF01028.15 AJA93056.1 - 1.1e-60 204.6 9.0 1.1e-60 204.6 6.3 2.3 2 1 2 4 4 4 1 Eukaryotic DNA topoisomerase I, catalytic core Topo_C_assoc PF14370.1 AJA93056.1 - 3e-22 78.0 2.0 3e-22 78.0 1.4 3.4 4 0 0 4 4 4 1 C-terminal topoisomerase domain DUF2524 PF10732.4 AJA93056.1 - 0.04 14.0 0.9 0.16 12.1 0.7 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2524) Glyco_tranf_2_3 PF13641.1 AJA93057.1 - 2.6e-33 115.7 0.0 3.8e-33 115.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 AJA93057.1 - 1e-19 71.0 0.2 1e-19 71.0 0.1 1.6 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 AJA93057.1 - 8.5e-16 58.0 0.1 1.5e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 AJA93057.1 - 7.6e-14 51.3 0.3 1.6e-13 50.3 0.1 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 21 Cellulose_synt PF03552.9 AJA93057.1 - 0.0026 16.1 2.0 0.0026 16.1 0.2 1.8 2 0 0 2 2 2 1 Cellulose synthase HlyIII PF03006.15 AJA93057.1 - 0.0054 16.1 6.3 0.014 14.7 0.1 3.1 2 1 0 2 2 2 1 Haemolysin-III related PyrI PF01948.13 AJA93058.1 - 2.5e-34 117.1 0.6 4.4e-34 116.3 0.4 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 AJA93058.1 - 1.1e-16 59.9 2.1 1.6e-16 59.4 1.4 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF1936 PF09151.5 AJA93058.1 - 0.049 13.1 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) zf-BED PF02892.10 AJA93058.1 - 0.1 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 BED zinc finger DUF3385 PF11865.3 AJA93058.1 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) DUF164 PF02591.10 AJA93058.1 - 0.19 11.5 1.4 0.4 10.5 0.1 2.1 2 0 0 2 2 2 0 Putative zinc ribbon domain TP_methylase PF00590.15 AJA93059.1 - 6e-44 150.2 0.1 7e-44 150.0 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 AJA93059.1 - 0.0013 18.9 0.1 0.0025 18.0 0.1 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Aldolase PF01081.14 AJA93059.1 - 0.0091 15.1 0.0 0.02 14.0 0.0 1.6 1 0 0 1 1 1 1 KDPG and KHG aldolase HSP70 PF00012.15 AJA93060.1 - 3.1e-217 722.2 22.1 1.1e-195 651.1 13.3 2.3 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 AJA93060.1 - 2.9e-19 68.8 6.9 2.9e-19 68.8 4.8 2.7 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.11 AJA93060.1 - 0.037 13.6 0.0 0.084 12.4 0.0 1.6 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain MtrB PF05440.7 AJA93060.1 - 0.092 12.8 0.2 7 6.7 0.0 2.5 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B EcsC PF12787.2 AJA93060.1 - 0.12 11.6 5.7 0.3 10.4 4.0 1.6 1 0 0 1 1 1 0 EcsC protein family Spt4 PF06093.8 AJA93061.1 - 4.3e-13 48.9 0.7 5.3e-13 48.6 0.5 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.10 AJA93061.1 - 0.023 14.1 5.1 0.031 13.7 3.5 1.2 1 0 0 1 1 1 0 RecR protein zf-RING_5 PF14634.1 AJA93061.1 - 0.44 10.3 6.1 0.57 9.9 4.2 1.2 1 0 0 1 1 1 0 zinc-RING finger domain NAD_kinase PF01513.16 AJA93063.1 - 3.6e-31 108.0 0.2 5.6e-31 107.3 0.1 1.2 1 0 0 1 1 1 1 ATP-NAD kinase HTH_27 PF13463.1 AJA93063.1 - 6.6e-05 23.1 0.1 0.00014 22.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 AJA93063.1 - 0.00012 21.7 0.7 0.0013 18.4 0.1 2.5 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 AJA93063.1 - 0.0019 17.8 2.8 0.0033 17.1 0.6 2.5 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 AJA93063.1 - 0.0063 15.8 2.6 0.018 14.4 0.1 2.7 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding FeoC PF09012.5 AJA93063.1 - 0.007 16.0 0.6 0.023 14.3 0.2 2.0 2 0 0 2 2 2 1 FeoC like transcriptional regulator RNA_pol_Rpc34 PF05158.7 AJA93063.1 - 0.03 13.5 3.2 0.048 12.8 2.2 1.3 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit MarR_2 PF12802.2 AJA93063.1 - 0.047 13.3 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 MarR family Penicillinase_R PF03965.11 AJA93063.1 - 0.07 13.2 0.4 0.23 11.5 0.2 1.9 2 0 0 2 2 2 0 Penicillinase repressor TFIIE_alpha PF02002.12 AJA93063.1 - 0.072 12.5 1.1 0.24 10.9 0.4 2.1 1 1 1 2 2 2 0 TFIIE alpha subunit DUF4635 PF15466.1 AJA93064.1 - 0.025 13.8 0.2 0.029 13.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) DUF573 PF04504.9 AJA93064.1 - 0.079 13.2 2.5 0.14 12.4 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF573 Response_reg PF00072.19 AJA93064.1 - 0.089 12.8 0.2 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 Response regulator receiver domain DUF2165 PF09933.4 AJA93064.1 - 0.14 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) DUF2115 PF09888.4 AJA93064.1 - 0.2 11.7 2.5 0.24 11.4 0.8 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) THP2 PF09432.5 AJA93064.1 - 0.52 10.1 5.8 1.1 9.1 0.8 2.0 1 1 1 2 2 2 0 Tho complex subunit THP2 PDH PF02153.12 AJA93065.1 - 5.2e-26 91.0 0.2 6.8e-26 90.6 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.10 AJA93065.1 - 8.6e-07 28.9 0.1 2.6e-06 27.4 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 AJA93065.1 - 4.3e-05 23.8 0.0 0.00018 21.8 0.0 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 AJA93065.1 - 0.0001 21.4 0.3 0.00023 20.3 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 AJA93065.1 - 0.0016 17.9 0.0 0.0084 15.5 0.0 2.0 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.13 AJA93065.1 - 0.0028 17.3 0.2 0.0073 15.9 0.0 1.9 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CoA_binding_2 PF13380.1 AJA93065.1 - 0.0038 17.3 0.0 0.035 14.2 0.0 2.4 2 0 0 2 2 2 1 CoA binding domain NAD_Gly3P_dh_N PF01210.18 AJA93065.1 - 0.0071 16.0 0.7 0.96 9.1 0.0 2.7 1 1 1 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 AJA93065.1 - 0.0083 16.1 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding UDPG_MGDP_dh_N PF03721.9 AJA93065.1 - 0.056 12.8 0.0 0.15 11.4 0.0 1.8 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF1320 PF07030.7 AJA93065.1 - 0.13 12.0 0.0 0.45 10.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1320) Ldh_1_N PF00056.18 AJA93066.1 - 1.5e-38 131.7 0.5 2.8e-38 130.9 0.4 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 AJA93066.1 - 5.4e-30 104.4 0.0 7.9e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.11 AJA93066.1 - 0.027 13.7 1.1 0.51 9.6 0.0 2.4 2 1 1 3 3 3 0 Family 4 glycosyl hydrolase zinc_ribbon_5 PF13719.1 AJA93067.1 - 0.00016 21.1 0.7 0.29 10.7 0.1 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 AJA93067.1 - 0.00023 20.8 0.6 0.3 10.8 0.1 2.1 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 AJA93067.1 - 0.00051 19.2 2.3 0.00073 18.8 1.6 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding DNA_RNApol_7kD PF03604.8 AJA93067.1 - 0.0024 17.3 2.6 0.17 11.3 0.1 2.5 2 1 1 3 3 3 1 DNA directed RNA polymerase, 7 kDa subunit RNA_POL_M_15KD PF02150.11 AJA93067.1 - 0.0049 16.5 1.3 0.0078 15.8 0.9 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit HypA PF01155.14 AJA93067.1 - 0.021 14.4 0.5 0.023 14.3 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-HYPF PF07503.7 AJA93067.1 - 0.03 13.7 2.6 0.46 9.9 1.8 2.0 1 1 0 1 1 1 0 HypF finger zf-TFIIB PF13453.1 AJA93067.1 - 0.034 13.3 2.0 0.058 12.6 1.4 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger Zn_ribbon_recom PF13408.1 AJA93067.1 - 0.036 14.3 0.1 0.94 9.7 0.0 2.0 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-ribbon_3 PF13248.1 AJA93067.1 - 0.046 12.9 1.3 1.3 8.3 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.1 AJA93067.1 - 0.046 13.4 3.6 0.13 11.9 2.5 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Ogr_Delta PF04606.7 AJA93067.1 - 0.056 13.1 0.7 0.87 9.2 0.2 2.0 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DUF2387 PF09526.5 AJA93067.1 - 0.062 13.2 0.6 0.076 12.9 0.4 1.2 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) Lar_restr_allev PF14354.1 AJA93067.1 - 0.073 13.3 4.0 0.18 12.1 2.7 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar Elf1 PF05129.8 AJA93067.1 - 0.082 12.6 0.2 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like LBR_tudor PF09465.5 AJA93067.1 - 0.083 12.5 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain DUF3133 PF11331.3 AJA93067.1 - 0.099 12.2 0.5 0.15 11.6 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3133) zinc-ribbons_6 PF07191.7 AJA93067.1 - 0.11 12.2 0.6 0.16 11.8 0.4 1.3 1 1 0 1 1 1 0 zinc-ribbons A2L_zn_ribbon PF08792.5 AJA93067.1 - 0.12 11.8 2.0 3.3 7.2 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.2 AJA93067.1 - 0.14 12.0 1.3 0.3 10.9 0.9 1.7 1 1 0 1 1 1 0 Double zinc ribbon DRP PF06044.7 AJA93067.1 - 0.18 10.7 0.2 0.18 10.7 0.1 1.0 1 0 0 1 1 1 0 Dam-replacing family zf-CSL PF05207.8 AJA93067.1 - 0.72 9.4 2.8 1.1 8.7 0.1 1.9 1 1 1 2 2 2 0 CSL zinc finger zf-IS66 PF13005.2 AJA93067.1 - 1.9 8.5 3.9 17 5.4 0.2 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 Rubredoxin PF00301.15 AJA93067.1 - 2.1 8.2 4.5 16 5.5 0.1 2.4 2 1 0 2 2 2 0 Rubredoxin PTH2 PF01981.11 AJA93068.1 - 1.4e-42 144.0 0.1 1.5e-42 143.9 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 zinc_ribbon_5 PF13719.1 AJA93069.1 - 3.9e-09 35.9 3.9 3.2e-06 26.6 0.8 2.1 1 1 1 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 AJA93069.1 - 2e-08 33.7 4.3 1.2e-05 24.8 1.1 2.1 1 1 1 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA93069.1 - 0.00011 21.3 1.3 0.031 13.4 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain Prok-RING_1 PF14446.1 AJA93069.1 - 0.00017 21.2 2.3 0.00073 19.2 1.6 1.8 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 RNA_POL_M_15KD PF02150.11 AJA93069.1 - 0.00039 20.0 1.0 0.00053 19.6 0.7 1.2 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit zf-IS66 PF13005.2 AJA93069.1 - 0.00062 19.6 2.7 0.25 11.3 0.2 2.4 1 1 1 2 2 2 2 zinc-finger binding domain of transposase IS66 TF_Zn_Ribbon PF08271.7 AJA93069.1 - 0.00079 18.6 1.7 0.00093 18.4 1.2 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding UPF0547 PF10571.4 AJA93069.1 - 0.0011 18.6 2.3 0.47 10.1 0.1 2.3 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 zf-C4_Topoisom PF01396.14 AJA93069.1 - 0.0013 18.1 1.2 0.52 9.8 0.0 2.1 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger OrfB_Zn_ribbon PF07282.6 AJA93069.1 - 0.0021 17.6 0.3 0.0029 17.2 0.2 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TerY-C PF15616.1 AJA93069.1 - 0.0025 17.7 0.9 0.036 13.9 0.6 2.0 1 1 0 1 1 1 1 TerY-C metal binding domain Ogr_Delta PF04606.7 AJA93069.1 - 0.0034 17.0 2.4 0.65 9.7 0.2 2.1 2 0 0 2 2 2 2 Ogr/Delta-like zinc finger DZR PF12773.2 AJA93069.1 - 0.004 16.9 1.3 0.0079 15.9 1.0 1.5 1 1 0 1 1 1 1 Double zinc ribbon A2L_zn_ribbon PF08792.5 AJA93069.1 - 0.0041 16.5 1.3 0.076 12.4 0.1 2.1 2 0 0 2 2 2 1 A2L zinc ribbon domain PhnA_Zn_Ribbon PF08274.7 AJA93069.1 - 0.0058 16.3 1.7 0.079 12.7 2.0 1.9 1 1 1 2 2 2 2 PhnA Zinc-Ribbon zf-TFIIB PF13453.1 AJA93069.1 - 0.006 15.7 3.5 0.017 14.2 2.7 1.5 1 1 1 2 2 2 1 Transcription factor zinc-finger IBR PF01485.16 AJA93069.1 - 0.0096 15.7 0.8 0.013 15.4 0.6 1.2 1 0 0 1 1 1 1 IBR domain HypA PF01155.14 AJA93069.1 - 0.0099 15.5 0.3 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family CpXC PF14353.1 AJA93069.1 - 0.019 14.8 0.5 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 CpXC protein zf-HYPF PF07503.7 AJA93069.1 - 0.02 14.2 3.4 0.25 10.7 2.3 2.0 1 1 0 1 1 1 0 HypF finger BssC_TutF PF08201.6 AJA93069.1 - 0.024 14.1 2.3 1.1 8.7 0.2 2.0 1 1 1 2 2 2 0 BssC/TutF protein DNA_RNApol_7kD PF03604.8 AJA93069.1 - 0.027 13.9 2.8 0.089 12.2 1.9 1.8 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF329 PF03884.9 AJA93069.1 - 0.03 13.8 2.8 1.2 8.6 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-RING_3 PF14369.1 AJA93069.1 - 0.036 14.0 4.6 0.21 11.6 3.2 1.9 1 1 0 1 1 1 0 zinc-finger zinc-ribbons_6 PF07191.7 AJA93069.1 - 0.039 13.7 1.7 0.13 12.1 1.2 1.7 1 1 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.1 AJA93069.1 - 0.048 13.1 4.3 0.75 9.3 3.0 2.3 1 1 0 1 1 1 0 zinc-ribbon domain zf-C2H2_6 PF13912.1 AJA93069.1 - 0.05 13.5 0.4 0.8 9.7 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.5 AJA93069.1 - 0.056 13.4 5.1 1.2 9.1 3.5 2.1 1 1 0 1 1 1 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.11 AJA93069.1 - 0.07 12.8 7.4 0.72 9.5 0.2 2.5 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Lar_restr_allev PF14354.1 AJA93069.1 - 0.073 13.3 2.6 0.17 12.2 1.8 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar DUF164 PF02591.10 AJA93069.1 - 0.082 12.7 4.4 0.14 12.0 0.1 2.3 1 1 1 2 2 2 0 Putative zinc ribbon domain zf-CSL PF05207.8 AJA93069.1 - 0.083 12.4 1.2 0.12 11.8 0.8 1.4 1 1 0 1 1 1 0 CSL zinc finger COX5B PF01215.14 AJA93069.1 - 0.087 12.4 0.2 0.33 10.6 0.0 1.8 1 1 1 2 2 2 0 Cytochrome c oxidase subunit Vb zf-H2C2_2 PF13465.1 AJA93069.1 - 0.088 13.1 1.8 1.2 9.5 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger double domain DUF2387 PF09526.5 AJA93069.1 - 0.1 12.5 1.5 0.14 12.1 1.0 1.3 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) zf-ISL3 PF14690.1 AJA93069.1 - 0.12 12.4 0.1 4.4 7.4 0.0 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RRN7 PF11781.3 AJA93069.1 - 0.24 10.9 2.1 0.76 9.3 0.1 2.1 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-tcix PF14952.1 AJA93069.1 - 0.4 10.0 2.2 2.4 7.5 0.1 2.1 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.2 AJA93069.1 - 0.48 10.2 3.1 1.1 9.1 0.1 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DUF3797 PF12677.2 AJA93069.1 - 0.62 9.7 3.9 3 7.5 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Rubredoxin PF00301.15 AJA93069.1 - 0.94 9.4 5.5 6.9 6.6 0.4 2.5 1 1 1 2 2 2 0 Rubredoxin AFP PF02420.10 AJA93069.1 - 8.4 6.9 6.0 3.3 8.1 0.6 2.4 2 0 0 2 2 2 0 Insect antifreeze protein repeat SNO PF01174.14 AJA93070.1 - 3.4e-49 167.0 0.3 3.8e-49 166.8 0.2 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.9 AJA93070.1 - 1.2e-13 50.9 0.0 2.5e-13 49.8 0.0 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 AJA93070.1 - 1.1e-11 44.5 0.0 1.5e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 AJA93070.1 - 1.5e-07 31.1 0.1 2.3e-06 27.2 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 Peptidase_S51 PF03575.12 AJA93070.1 - 1e-05 25.3 0.2 1.5e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.4 AJA93070.1 - 0.00021 20.2 0.0 0.1 11.3 0.0 2.5 2 1 0 2 2 2 2 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.19 AJA93070.1 - 0.00092 18.6 0.0 0.0017 17.8 0.0 1.4 1 0 0 1 1 1 1 DJ-1/PfpI family ChlI PF13541.1 AJA93070.1 - 0.021 14.3 0.2 0.096 12.2 0.1 2.0 2 0 0 2 2 2 0 Subunit ChlI of Mg-chelatase CopD PF05425.8 AJA93071.1 - 1.5e-15 57.2 1.8 1.5e-15 57.2 1.3 1.7 2 0 0 2 2 2 1 Copper resistance protein D DUF4149 PF13664.1 AJA93071.1 - 4.6e-06 26.6 2.9 3.3e-05 23.8 0.9 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4149) DUF2269 PF10027.4 AJA93071.1 - 0.00015 21.5 7.9 0.00021 21.0 5.5 1.2 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2269) UPF0093 PF03653.8 AJA93071.1 - 0.011 15.7 11.0 0.035 14.0 7.6 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF3040 PF11239.3 AJA93071.1 - 0.058 13.4 0.0 0.058 13.4 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) DUF1772 PF08592.6 AJA93071.1 - 0.18 11.5 3.4 0.86 9.3 1.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) Brr6_like_C_C PF10104.4 AJA93071.1 - 0.3 10.6 4.5 0.087 12.3 0.6 2.0 1 1 1 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain DUF59 PF01883.14 AJA93072.1 - 2.3e-13 49.9 0.1 3.3e-13 49.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF59 HMA PF00403.21 AJA93072.1 - 0.063 13.4 0.2 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 Heavy-metal-associated domain SelR PF01641.13 AJA93073.1 - 2.6e-50 169.2 0.3 2.9e-50 169.1 0.2 1.0 1 0 0 1 1 1 1 SelR domain DUF2757 PF10955.3 AJA93073.1 - 0.0003 20.9 0.0 0.00059 19.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2757) Yippee-Mis18 PF03226.9 AJA93073.1 - 0.0054 16.7 0.5 0.023 14.7 0.3 2.0 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF983 PF06170.7 AJA93073.1 - 0.01 15.9 0.7 0.16 12.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF983) DUF678 PF05077.7 AJA93073.1 - 0.018 14.9 0.2 7.9 6.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF678) Zn-ribbon_8 PF09723.5 AJA93073.1 - 0.033 14.1 0.2 9 6.3 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain HNH_5 PF14279.1 AJA93073.1 - 0.045 13.7 0.3 0.089 12.8 0.0 1.8 2 0 0 2 2 1 0 HNH endonuclease zf-HIT PF04438.11 AJA93073.1 - 0.065 12.8 3.2 0.9 9.2 0.2 2.4 2 0 0 2 2 2 0 HIT zinc finger GFA PF04828.9 AJA93073.1 - 0.069 13.1 1.1 9.6 6.2 0.1 2.3 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ribbon_3 PF13248.1 AJA93073.1 - 0.13 11.4 2.7 7.5 5.9 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 AJA93073.1 - 0.23 11.2 2.5 1.8 8.4 1.7 2.3 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 AJA93073.1 - 0.76 9.6 5.4 13 5.6 1.5 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.1 AJA93073.1 - 0.88 9.1 4.2 23 4.6 1.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.1 AJA93073.1 - 1.1 9.6 4.4 2.1 8.7 0.7 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf-Mss51 PF13824.1 AJA93073.1 - 1.2 9.0 3.9 13 5.7 0.1 2.8 1 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CCHC_6 PF15288.1 AJA93073.1 - 1.8 8.2 5.7 10 5.8 0.2 2.6 2 0 0 2 2 2 0 Zinc knuckle Abi PF02517.11 AJA93074.1 - 0.0036 17.4 4.1 0.0036 17.4 2.8 2.9 2 1 1 3 3 3 2 CAAX protease self-immunity UPF0147 PF03685.8 AJA93075.1 - 4.2e-28 97.0 1.1 4.5e-28 96.9 0.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.7 AJA93075.1 - 0.0018 18.3 0.0 1.9 8.6 0.0 2.2 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0253) DUF3783 PF12646.2 AJA93075.1 - 0.052 13.2 0.0 0.081 12.6 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3783) DUF998 PF06197.8 AJA93076.1 - 0.051 12.8 6.3 0.61 9.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF998) DUF4131 PF13567.1 AJA93076.1 - 6.7 6.0 8.7 7.2 5.9 3.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) AsnC_trans_reg PF01037.16 AJA93077.1 - 7.1e-14 51.2 0.1 9.9e-14 50.8 0.0 1.2 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 AJA93077.1 - 2.9e-11 42.5 2.3 4.5e-11 41.9 1.6 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 AJA93077.1 - 2.7e-08 33.1 0.2 4.5e-08 32.4 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 AJA93077.1 - 0.00044 19.8 0.4 0.00093 18.7 0.3 1.6 1 0 0 1 1 1 1 HTH domain MarR PF01047.17 AJA93077.1 - 0.00072 19.2 0.3 0.0012 18.4 0.2 1.3 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.7 AJA93077.1 - 0.0014 18.3 0.2 0.0022 17.8 0.2 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC Ribosomal_S25 PF03297.10 AJA93077.1 - 0.0082 16.1 0.7 0.015 15.3 0.5 1.3 1 0 0 1 1 1 1 S25 ribosomal protein Mga PF05043.8 AJA93077.1 - 0.0093 16.2 0.6 0.016 15.4 0.4 1.3 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_34 PF13601.1 AJA93077.1 - 0.027 14.4 0.6 0.046 13.7 0.2 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_psq PF05225.11 AJA93077.1 - 0.039 13.5 0.0 0.061 12.8 0.0 1.2 1 0 0 1 1 1 0 helix-turn-helix, Psq domain TrmB PF01978.14 AJA93077.1 - 0.075 12.7 0.1 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DbpA PF03880.10 AJA93077.1 - 0.077 12.6 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 DbpA RNA binding domain MotA_activ PF09114.5 AJA93077.1 - 0.1 12.3 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 Transcription factor MotA, activation domain Rrf2 PF02082.15 AJA93077.1 - 0.12 12.5 0.1 0.22 11.6 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator AsnC_trans_reg PF01037.16 AJA93078.1 - 3.4e-09 36.2 0.1 3.9e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 AsnC family ACT_4 PF13291.1 AJA93078.1 - 0.039 14.3 0.3 0.19 12.1 0.2 1.9 1 1 1 2 2 2 0 ACT domain GYD PF08734.6 AJA93078.1 - 0.14 11.9 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 GYD domain DUF2387 PF09526.5 AJA93079.1 - 0.018 14.9 0.2 0.02 14.7 0.1 1.1 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) DUF4475 PF14753.1 AJA93079.1 - 0.13 11.7 1.7 0.13 11.7 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4475) DUF4252 PF14060.1 AJA93081.1 - 0.017 14.6 1.9 0.057 12.9 0.3 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4252) AAA_23 PF13476.1 AJA93081.1 - 0.034 14.4 0.7 0.041 14.2 0.5 1.0 1 0 0 1 1 1 0 AAA domain DUF4179 PF13786.1 AJA93081.1 - 0.056 13.6 0.3 0.056 13.6 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) Glutaminase PF04960.10 AJA93081.1 - 0.078 11.9 2.4 4.5 6.1 0.1 2.1 2 0 0 2 2 2 0 Glutaminase DUF3970 PF13113.1 AJA93081.1 - 0.099 12.3 0.5 0.25 11.0 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) MIS13 PF08202.6 AJA93081.1 - 0.11 11.5 2.2 0.15 11.0 1.6 1.2 1 0 0 1 1 1 0 Mis12-Mtw1 protein family DUF2175 PF09943.4 AJA93081.1 - 0.11 12.5 2.3 0.12 12.4 0.6 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) ABC2_membrane_3 PF12698.2 AJA93081.1 - 0.53 9.2 3.7 0.66 8.9 2.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein 7TMR-DISM_7TM PF07695.6 AJA93082.1 - 0.0075 15.9 9.0 0.0089 15.7 6.2 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling YtpI PF14007.1 AJA93082.1 - 0.017 15.0 2.7 0.017 15.0 1.9 2.6 2 1 1 3 3 3 0 YtpI-like protein Intg_mem_TP0381 PF09529.5 AJA93082.1 - 0.044 13.0 12.2 0.092 11.9 8.6 1.5 1 1 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) Metal_hydrol PF10118.4 AJA93082.1 - 0.047 13.1 0.2 0.059 12.8 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-dependent hydrolase ABC2_membrane_5 PF13346.1 AJA93082.1 - 0.28 10.4 11.9 0.4 9.9 8.2 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Cation_ATPase_C PF00689.16 AJA93082.1 - 0.31 10.5 9.0 0.26 10.7 3.9 1.9 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus 5TM-5TMR_LYT PF07694.7 AJA93082.1 - 0.45 9.8 8.3 0.25 10.6 4.3 1.6 1 1 0 1 1 1 0 5TMR of 5TMR-LYT DUF1761 PF08570.5 AJA93082.1 - 1.1 9.2 8.9 1.6 8.7 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1761) YoqO PF14037.1 AJA93082.1 - 2 8.5 7.6 1.3 9.1 4.2 1.5 1 1 0 1 1 1 0 YoqO-like protein Oxidored_q2 PF00420.19 AJA93082.1 - 5.9 6.5 13.3 1.3 8.6 4.9 2.2 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTDII PF01556.13 AJA93083.1 - 5.5e-29 99.8 4.6 5.6e-24 83.8 0.1 3.2 3 0 0 3 3 3 2 DnaJ C terminal domain DnaJ PF00226.26 AJA93083.1 - 8.4e-25 86.2 1.0 1.4e-24 85.5 0.7 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 AJA93083.1 - 2e-13 50.1 19.0 3.4e-13 49.4 13.2 1.4 1 0 0 1 1 1 1 DnaJ central domain DUF354 PF04007.7 AJA93084.1 - 3e-53 180.8 5.1 3.3e-53 180.7 3.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.14 AJA93084.1 - 0.0012 17.6 0.2 0.0017 17.1 0.2 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Cupredoxin_1 PF13473.1 AJA93085.1 - 1.5e-07 31.2 0.0 1.9e-06 27.7 0.0 2.5 2 1 0 2 2 2 1 Cupredoxin-like domain Copper-bind PF00127.15 AJA93085.1 - 7.2e-06 26.1 0.1 7.2e-06 26.1 0.1 2.9 2 2 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family HC2 PF07382.6 AJA93085.1 - 0.00012 22.0 28.3 0.00017 21.4 19.6 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 Rifin_STEVOR PF02009.11 AJA93085.1 - 0.02 14.5 3.0 0.028 14.0 2.1 1.3 1 0 0 1 1 1 0 Rifin/stevor family V-set PF07686.12 AJA93085.1 - 0.054 13.3 1.5 1.5 8.7 0.0 2.7 2 1 0 2 2 2 0 Immunoglobulin V-set domain DUF2360 PF10152.4 AJA93085.1 - 0.15 12.3 0.2 0.15 12.3 0.1 2.5 2 1 0 2 2 2 0 Predicted coiled-coil domain-containing protein (DUF2360) RR_TM4-6 PF06459.7 AJA93085.1 - 4.5 7.0 8.6 2.9 7.7 4.8 1.4 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 CTP_transf_3 PF02348.14 AJA93086.1 - 3.3e-30 105.3 0.2 4e-30 105.0 0.2 1.1 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.2 AJA93086.1 - 0.0055 16.7 0.0 0.012 15.7 0.0 1.5 1 1 0 1 1 1 1 MobA-like NTP transferase domain HMA PF00403.21 AJA93086.1 - 0.042 13.9 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 Heavy-metal-associated domain IMS PF00817.15 AJA93087.1 - 5.5e-42 143.0 0.1 2e-41 141.2 0.0 1.8 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.3 AJA93087.1 - 1.2e-15 57.5 0.8 2.9e-15 56.3 0.2 1.8 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 AJA93087.1 - 9.1e-09 34.8 0.1 3.2e-08 33.1 0.0 2.0 2 0 0 2 2 2 1 IMS family HHH motif Cdd1 PF11731.3 AJA93087.1 - 0.0014 18.4 0.1 0.016 15.1 0.0 2.8 2 1 0 2 2 2 1 Pathogenicity locus TfoX_C PF04994.8 AJA93087.1 - 0.0066 16.3 0.2 0.1 12.5 0.0 2.9 3 1 0 3 3 3 1 TfoX C-terminal domain ICAT PF06384.6 AJA93087.1 - 0.009 15.7 0.7 0.84 9.4 0.0 3.5 4 0 0 4 4 4 1 Beta-catenin-interacting protein ICAT Methyltransf_33 PF10017.4 AJA93088.1 - 1.2e-45 154.4 1.5 2.2e-45 153.6 1.0 1.5 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent Methyltransf_23 PF13489.1 AJA93088.1 - 0.0042 16.8 0.2 0.042 13.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain DUF3760 PF12586.3 AJA93088.1 - 0.0079 16.0 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3760) Methyltransf_25 PF13649.1 AJA93088.1 - 0.015 15.6 0.0 0.075 13.4 0.0 2.1 1 1 2 3 3 3 0 Methyltransferase domain DUF1825 PF08855.5 AJA93088.1 - 0.018 15.0 1.3 0.29 11.1 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1825) DZR PF12773.2 AJA93089.1 - 0.0016 18.1 0.2 0.0022 17.7 0.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-IS66 PF13005.2 AJA93089.1 - 0.0094 15.9 0.4 1 9.3 0.1 2.4 2 0 0 2 2 2 1 zinc-finger binding domain of transposase IS66 C1_4 PF07975.7 AJA93089.1 - 0.024 14.6 0.1 2.3 8.3 0.0 2.2 2 0 0 2 2 2 0 TFIIH C1-like domain Zn-ribbon_8 PF09723.5 AJA93089.1 - 0.027 14.4 0.4 0.43 10.5 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2 PF00096.21 AJA93089.1 - 0.039 14.2 1.0 0.53 10.7 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF35_N PF12172.3 AJA93089.1 - 0.08 12.8 1.7 2.7 7.9 0.1 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_RNApol_7kD PF03604.8 AJA93089.1 - 0.092 12.2 2.2 1.9 8.0 0.3 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-LYAR PF08790.6 AJA93089.1 - 0.097 12.3 2.1 3.6 7.3 0.2 2.4 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger Zn_ribbon_recom PF13408.1 AJA93089.1 - 0.11 12.8 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain zf-HYPF PF07503.7 AJA93089.1 - 0.16 11.4 2.3 3.4 7.1 0.3 2.3 2 0 0 2 2 2 0 HypF finger zf-RING_4 PF14570.1 AJA93090.1 - 0.00054 19.4 0.5 0.15 11.7 0.0 2.1 2 0 0 2 2 2 2 RING/Ubox like zinc-binding domain OrfB_Zn_ribbon PF07282.6 AJA93090.1 - 0.002 17.7 0.2 0.0024 17.4 0.1 1.0 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Rad50_zn_hook PF04423.9 AJA93090.1 - 0.0038 16.6 0.7 0.81 9.2 0.0 2.3 2 0 0 2 2 2 2 Rad50 zinc hook motif zinc_ribbon_5 PF13719.1 AJA93090.1 - 0.0099 15.4 0.3 0.23 11.0 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 AJA93090.1 - 0.014 15.0 0.3 0.38 10.5 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-H2C2_2 PF13465.1 AJA93090.1 - 0.021 15.0 0.6 1.8 9.0 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-RING_3 PF14369.1 AJA93090.1 - 0.038 13.9 2.2 1.3 9.1 0.2 2.1 1 1 1 2 2 2 0 zinc-finger Elf1 PF05129.8 AJA93090.1 - 0.043 13.5 0.6 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like PhnA_Zn_Ribbon PF08274.7 AJA93090.1 - 0.06 13.1 2.0 1.7 8.4 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-RING_5 PF14634.1 AJA93090.1 - 0.064 12.9 1.0 3.2 7.5 0.0 2.1 2 0 0 2 2 2 0 zinc-RING finger domain IBR PF01485.16 AJA93090.1 - 0.071 12.9 0.9 0.12 12.2 0.6 1.4 1 1 0 1 1 1 0 IBR domain zf-C3HC4_3 PF13920.1 AJA93090.1 - 0.13 11.9 3.6 13 5.4 0.2 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 AJA93090.1 - 0.13 12.0 1.4 0.21 11.4 1.0 1.5 1 1 0 1 1 1 0 Double zinc ribbon DUF2387 PF09526.5 AJA93090.1 - 0.14 12.1 1.4 0.31 10.9 0.9 1.5 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) zf-Di19 PF05605.7 AJA93090.1 - 0.17 12.0 2.5 6.4 6.9 0.0 2.1 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF4451 PF14616.1 AJA93090.1 - 0.17 11.6 2.0 3.1 7.5 1.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4451) Prok-RING_1 PF14446.1 AJA93090.1 - 0.21 11.3 1.7 1.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Nudix_N_2 PF14803.1 AJA93090.1 - 0.36 10.5 2.2 5.9 6.6 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.5 AJA93090.1 - 3.3 7.7 4.8 26 4.8 3.4 2.0 1 1 1 2 2 2 0 Zinc ribbon domain Nitroreductase PF00881.19 AJA93091.1 - 5.6e-30 104.3 0.0 7.4e-30 103.9 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family ABC_tran PF00005.22 AJA93092.1 - 2.1e-26 92.8 0.1 2.8e-26 92.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 AJA93092.1 - 4.2e-20 71.8 0.1 7.1e-20 71.1 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 AJA93092.1 - 3.7e-09 36.9 4.3 1.1e-07 32.1 3.0 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 AJA93092.1 - 8.6e-05 21.8 2.0 0.00014 21.1 1.4 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain PRK PF00485.13 AJA93092.1 - 0.0086 15.6 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family ATP-synt_ab PF00006.20 AJA93092.1 - 0.009 15.5 0.1 0.015 14.8 0.1 1.3 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.1 AJA93092.1 - 0.017 14.5 0.0 0.026 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 AJA93092.1 - 0.037 14.3 0.7 0.24 11.6 0.5 2.3 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 AJA93092.1 - 0.11 12.0 0.1 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain NAD_binding_1 PF00175.16 AJA93093.1 - 1.3e-13 51.4 0.0 2.5e-13 50.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 AJA93093.1 - 7.8e-10 38.7 0.0 1.3e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 AJA93093.1 - 0.057 13.3 0.0 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Ferric reductase NAD binding domain NUDIX PF00293.23 AJA93094.1 - 1.1e-19 70.4 0.0 1.3e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain HTH_24 PF13412.1 AJA93095.1 - 0.00013 21.2 0.1 0.00025 20.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 AJA93095.1 - 0.0023 17.5 0.1 0.0057 16.3 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 AJA93095.1 - 0.0053 16.3 0.0 0.015 14.9 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 AJA93095.1 - 0.008 16.4 0.0 0.19 12.0 0.0 2.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain MttA_Hcf106 PF02416.11 AJA93096.1 - 9.6e-11 40.6 0.3 1.3e-10 40.2 0.0 1.4 2 0 0 2 2 2 1 mttA/Hcf106 family UPF0118 PF01594.11 AJA93096.1 - 0.0083 15.1 0.0 0.01 14.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 Lip_A_acyltrans PF03279.8 AJA93096.1 - 0.037 12.9 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase Hc1 PF07432.8 AJA93096.1 - 0.079 13.1 0.3 0.11 12.7 0.2 1.2 1 0 0 1 1 1 0 Histone H1-like protein Hc1 Porphobil_deam PF01379.15 AJA93097.1 - 3.3e-72 241.9 0.0 4e-72 241.6 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 AJA93097.1 - 1.4e-15 57.1 0.0 3.5e-15 55.8 0.0 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Metallothio_Euk PF12749.2 AJA93098.1 - 0.031 14.2 6.5 0.034 14.1 4.5 1.1 1 0 0 1 1 1 0 Eukaryotic metallothionein zf-C4pol PF14260.1 AJA93098.1 - 0.06 13.3 6.0 0.094 12.7 4.1 1.3 1 0 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta Fer4 PF00037.22 AJA93099.1 - 7.7e-10 37.9 12.0 1.7e-06 27.3 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 AJA93099.1 - 1.7e-09 37.9 4.2 2.3e-09 37.4 2.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 AJA93099.1 - 2.3e-07 30.5 3.2 3.8e-07 29.7 2.2 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 AJA93099.1 - 3.2e-07 29.9 11.2 0.00016 21.3 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 AJA93099.1 - 5.5e-07 29.1 7.5 0.0052 16.6 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 AJA93099.1 - 1.3e-06 28.1 3.5 2.1e-06 27.4 2.4 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 AJA93099.1 - 2.7e-05 24.3 8.5 0.00018 21.6 6.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 AJA93099.1 - 4.6e-05 24.0 0.6 0.1 13.3 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 AJA93099.1 - 5.5e-05 23.1 7.8 0.075 13.4 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 AJA93099.1 - 0.00014 22.2 12.5 0.069 13.7 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 AJA93099.1 - 0.00014 21.8 3.9 0.00031 20.7 2.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 AJA93099.1 - 0.00028 21.2 5.0 0.16 12.3 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 AJA93099.1 - 0.00056 20.2 5.8 0.036 14.5 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 AJA93099.1 - 0.00068 20.1 9.8 0.049 14.1 6.8 2.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 AJA93099.1 - 0.00091 19.5 5.1 0.016 15.5 3.6 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain WW PF00397.21 AJA93100.1 - 0.076 12.8 0.1 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 WW domain zf-CSL PF05207.8 AJA93100.1 - 0.13 11.8 3.7 0.07 12.6 1.2 1.6 1 1 1 2 2 2 0 CSL zinc finger NCD3G PF07562.9 AJA93100.1 - 0.71 9.6 5.1 3.6 7.3 3.5 1.9 1 1 1 2 2 2 0 Nine Cysteines Domain of family 3 GPCR Aconitase PF00330.15 AJA93101.1 - 2.8e-153 510.7 0.1 3.2e-152 507.2 0.0 2.0 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 AJA93101.1 - 1.6e-38 131.8 0.1 4.7e-38 130.2 0.0 1.9 2 0 0 2 2 2 1 Aconitase C-terminal domain DUF521 PF04412.8 AJA93101.1 - 0.02 13.4 0.0 0.034 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF521) DZR PF12773.2 AJA93102.1 - 0.099 12.4 5.4 0.23 11.2 3.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon LIM PF00412.17 AJA93102.1 - 0.16 12.0 9.1 0.22 11.6 6.3 1.2 1 0 0 1 1 1 0 LIM domain PolC_DP2 PF03833.8 AJA93102.1 - 0.23 9.0 3.8 0.22 9.1 2.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 PhnA_Zn_Ribbon PF08274.7 AJA93102.1 - 0.3 10.8 0.6 0.3 10.8 0.4 2.3 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Nudix_N_2 PF14803.1 AJA93102.1 - 0.45 10.2 4.2 3.7 7.3 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal DUF1272 PF06906.6 AJA93102.1 - 1.5 8.6 6.0 4.8 7.1 4.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) Zn_ribbon_2 PF12674.2 AJA93102.1 - 1.6 9.1 7.7 1.8 8.9 5.4 1.2 1 0 0 1 1 1 0 Putative zinc ribbon domain zf-ribbon_3 PF13248.1 AJA93102.1 - 7.5 5.9 8.6 12 5.2 5.9 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-A20 PF01754.11 AJA93102.1 - 10 5.8 8.8 1.1 8.8 1.3 2.2 2 0 0 2 2 2 0 A20-like zinc finger Cas_CT1975 PF09344.5 AJA93103.1 - 0.011 15.0 0.1 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 CT1975-like protein Acetyltransf_9 PF13527.1 AJA93103.1 - 0.099 12.5 0.0 0.14 11.9 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Semialdhyde_dh PF01118.19 AJA93104.1 - 2.5e-34 118.1 0.0 4.5e-34 117.3 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 AJA93104.1 - 2.2e-18 66.7 0.0 3.2e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 AJA93104.1 - 9.5e-05 22.8 0.0 0.00017 22.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.15 AJA93104.1 - 0.0001 22.2 0.0 0.00021 21.1 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.12 AJA93104.1 - 0.008 16.5 0.0 0.017 15.5 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh PF03435.13 AJA93104.1 - 0.011 14.7 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 AJA93104.1 - 0.04 13.9 0.0 0.091 12.7 0.0 1.6 1 0 0 1 1 1 0 NADH(P)-binding V_ATPase_I PF01496.14 AJA93105.1 - 9.4e-53 179.1 15.4 4.8e-52 176.8 10.7 1.8 1 1 0 1 1 1 1 V-type ATPase 116kDa subunit family Imm46 PF15585.1 AJA93105.1 - 0.059 13.4 0.3 1.3 9.1 0.0 2.5 2 0 0 2 2 2 0 Immunity protein 46 Nup54 PF13874.1 AJA93105.1 - 0.2 11.2 2.3 4.5 6.9 0.1 2.6 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 DUF1351 PF07083.6 AJA93105.1 - 0.2 11.2 15.5 0.15 11.6 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1351) Syntaxin PF00804.20 AJA93105.1 - 7.2 6.8 8.4 2.8 8.1 0.3 2.7 2 1 0 2 2 2 0 Syntaxin Trypsin_2 PF13365.1 AJA93106.1 - 2.8e-23 82.1 0.3 6.2e-23 81.0 0.1 1.6 2 0 0 2 2 2 1 Trypsin-like peptidase domain Trypsin PF00089.21 AJA93106.1 - 1.5e-18 67.2 0.2 4.7e-18 65.5 0.1 1.8 1 1 0 1 1 1 1 Trypsin PDZ_2 PF13180.1 AJA93106.1 - 1.7e-12 47.0 0.9 6.4e-12 45.2 0.1 2.4 3 0 0 3 3 3 1 PDZ domain Peptidase_S46 PF10459.4 AJA93106.1 - 1.6e-05 23.5 0.4 0.008 14.6 0.2 2.1 2 0 0 2 2 2 2 Peptidase S46 PDZ PF00595.19 AJA93106.1 - 0.00038 20.5 2.5 0.77 9.9 0.2 3.5 3 0 0 3 3 3 2 PDZ domain (Also known as DHR or GLGF) Peptidase_S29 PF02907.10 AJA93106.1 - 0.0032 16.9 0.2 0.0082 15.6 0.0 1.8 2 0 0 2 2 2 1 Hepatitis C virus NS3 protease Peptidase_C4 PF00863.14 AJA93106.1 - 0.0035 16.3 0.0 0.0055 15.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family C4 Peptidase_S32 PF05579.8 AJA93106.1 - 0.0048 15.8 0.7 0.7 8.8 0.1 2.4 2 0 0 2 2 2 2 Equine arteritis virus serine endopeptidase S32 Peptidase_S7 PF00949.16 AJA93106.1 - 0.056 12.8 0.5 0.11 11.8 0.3 1.5 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Tricorn_PDZ PF14685.1 AJA93106.1 - 0.061 13.1 0.3 0.55 10.0 0.0 2.7 2 1 1 3 3 3 0 Tricorn protease PDZ domain DUF2370 PF10176.4 AJA93107.1 - 0.025 13.9 0.2 0.025 13.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF3914 PF13053.1 AJA93107.1 - 0.053 13.6 1.8 0.056 13.5 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) HAD_2 PF13419.1 AJA93109.1 - 9.5e-05 22.6 0.2 0.1 12.8 0.0 2.3 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 AJA93109.1 - 0.1 13.0 0.0 0.89 9.9 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Baculo_LEF-11 PF06385.7 AJA93109.1 - 0.18 11.9 1.1 0.57 10.3 0.8 1.8 1 0 0 1 1 1 0 Baculovirus LEF-11 protein Asn_synthase PF00733.16 AJA93111.1 - 3.8e-34 118.3 0.0 1.3e-33 116.5 0.0 1.7 1 1 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 AJA93111.1 - 9.3e-07 27.9 0.6 2.8e-06 26.3 0.1 1.9 2 1 1 3 3 3 1 NAD synthase QueC PF06508.8 AJA93111.1 - 1e-06 28.1 0.1 2e-06 27.2 0.0 1.6 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 AJA93111.1 - 0.00074 18.1 0.0 0.0019 16.8 0.0 1.7 1 1 0 1 1 1 1 tRNA methyl transferase ATP_bind_3 PF01171.15 AJA93111.1 - 0.0026 17.2 0.0 0.033 13.6 0.0 2.3 2 1 0 2 2 2 1 PP-loop family ThiI PF02568.9 AJA93111.1 - 0.004 16.6 0.3 0.018 14.4 0.0 2.0 2 1 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) AAA_9 PF12781.2 AJA93111.1 - 0.023 13.5 0.2 0.034 13.0 0.1 1.3 1 0 0 1 1 1 0 ATP-binding dynein motor region D5 ABM PF03992.11 AJA93112.1 - 1e-07 31.8 0.0 1.3e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF1330 PF07045.6 AJA93112.1 - 0.0047 16.7 0.0 0.0059 16.4 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1330) RRM_5 PF13893.1 AJA93112.1 - 0.013 15.3 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Dabb PF07876.7 AJA93112.1 - 0.14 12.6 0.2 0.2 12.1 0.2 1.4 1 1 0 1 1 1 0 Stress responsive A/B Barrel Domain Pyridox_oxidase PF01243.15 AJA93113.1 - 3e-17 62.3 0.0 4.7e-17 61.7 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 AJA93113.1 - 4e-11 42.9 0.0 5e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase UPF0104 PF03706.8 AJA93114.1 - 0.04 13.2 0.4 0.037 13.2 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0104) DUF308 PF03729.8 AJA93114.1 - 0.051 13.5 2.2 0.051 13.5 1.5 2.0 1 1 1 2 2 2 0 Short repeat of unknown function (DUF308) DUF998 PF06197.8 AJA93114.1 - 0.055 12.7 1.1 0.062 12.6 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF998) SPC25 PF06703.6 AJA93114.1 - 0.072 12.6 0.9 0.082 12.4 0.6 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Tetraspannin PF00335.15 AJA93114.1 - 0.074 12.3 2.7 0.082 12.1 1.8 1.0 1 0 0 1 1 1 0 Tetraspanin family MARVEL PF01284.18 AJA93114.1 - 0.095 12.5 1.9 0.11 12.3 1.3 1.1 1 0 0 1 1 1 0 Membrane-associating domain DUF202 PF02656.10 AJA93114.1 - 0.14 12.4 0.6 0.15 12.2 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF1600 PF07667.6 AJA93114.1 - 0.15 12.1 3.9 0.17 12.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) DUF1049 PF06305.6 AJA93114.1 - 0.32 10.5 3.7 0.11 11.9 0.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1049) DUF2207 PF09972.4 AJA93114.1 - 0.57 8.7 4.4 0.57 8.6 3.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) YtpI PF14007.1 AJA93114.1 - 2.3 8.2 6.0 4.6 7.2 4.2 1.5 1 1 0 1 1 1 0 YtpI-like protein DUF4097 PF13349.1 AJA93114.1 - 7.6 6.0 7.2 15 5.0 0.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4097) DNA_pol_B PF00136.16 AJA93115.1 - 6e-84 282.4 3.8 9.4e-84 281.8 2.6 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 AJA93115.1 - 8.5e-42 143.1 5.0 1.7e-41 142.2 3.5 1.5 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.1 AJA93115.1 - 1.9e-08 34.3 0.6 5.2e-08 32.8 0.4 1.8 1 1 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.4 AJA93115.1 - 4.4e-07 29.6 0.9 2e-06 27.4 0.6 2.1 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB Amino_oxidase PF01593.19 AJA93117.1 - 4.1e-19 68.9 0.0 5.6e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 AJA93117.1 - 6.2e-13 48.5 0.0 1.1e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 AJA93117.1 - 2.8e-09 36.3 0.0 0.00033 19.6 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.22 AJA93117.1 - 1.7e-06 28.3 0.5 0.0012 19.2 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 AJA93117.1 - 1.2e-05 24.3 0.2 0.0078 15.1 0.3 2.1 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.9 AJA93117.1 - 2.3e-05 24.3 0.0 0.0091 15.8 0.0 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 AJA93117.1 - 0.00017 20.2 0.1 0.24 9.8 0.1 2.2 2 0 0 2 2 2 2 HI0933-like protein GDI PF00996.13 AJA93117.1 - 0.00024 19.5 0.3 0.01 14.1 0.1 2.1 2 0 0 2 2 2 1 GDP dissociation inhibitor Strep_67kDa_ant PF06100.6 AJA93117.1 - 0.0066 14.8 0.0 0.013 13.8 0.0 1.4 1 1 0 1 1 1 1 Streptococcal 67 kDa myosin-cross-reactive antigen like family 3HCDH_N PF02737.13 AJA93117.1 - 0.0072 15.9 0.0 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.17 AJA93117.1 - 0.0077 15.1 0.4 1.1 7.9 0.0 2.3 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.16 AJA93117.1 - 0.029 13.9 0.0 0.065 12.8 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.12 AJA93117.1 - 0.031 13.3 0.4 0.23 10.5 0.0 2.1 2 0 0 2 2 2 0 Thi4 family Pyr_redox_3 PF13738.1 AJA93117.1 - 0.031 14.3 0.1 0.26 11.3 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.14 AJA93117.1 - 0.038 12.1 0.0 0.048 11.8 0.0 1.2 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like FAD_oxidored PF12831.2 AJA93117.1 - 0.081 11.9 0.0 8.8 5.2 0.0 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.18 AJA93117.1 - 0.13 12.0 0.0 0.28 10.8 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_9 PF13454.1 AJA93117.1 - 0.15 11.8 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.14 AJA93117.1 - 0.22 10.5 0.1 0.36 9.8 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain HSP20 PF00011.16 AJA93118.1 - 2.1e-06 27.5 1.6 4.1e-05 23.3 1.1 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 AJA93118.1 - 0.004 17.6 0.4 0.0062 17.0 0.3 1.2 1 0 0 1 1 1 1 CS domain PIH1 PF08190.7 AJA93118.1 - 0.016 14.7 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 pre-RNA processing PIH1/Nop17 LMWPc PF01451.16 AJA93119.1 - 2.4e-27 95.9 0.1 3.2e-27 95.5 0.1 1.2 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase Tir_receptor_M PF03549.9 AJA93119.1 - 0.045 13.8 0.0 0.099 12.7 0.0 1.5 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain Cupin_2 PF07883.6 AJA93120.1 - 5.5e-13 48.2 0.0 6.9e-13 47.8 0.0 1.2 1 0 0 1 1 1 1 Cupin domain CENP-C_C PF11699.3 AJA93120.1 - 1.2e-08 34.8 0.2 1.5e-08 34.4 0.2 1.1 1 0 0 1 1 1 1 Mif2/CENP-C like ARD PF03079.9 AJA93120.1 - 1.9e-05 24.6 0.1 0.00047 20.1 0.0 2.0 2 0 0 2 2 2 1 ARD/ARD' family AraC_binding PF02311.14 AJA93120.1 - 0.00015 21.4 0.0 0.00022 20.8 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.7 AJA93120.1 - 0.00055 19.5 0.0 0.00066 19.2 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.7 AJA93120.1 - 0.0011 18.2 0.0 0.0015 17.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.13 AJA93120.1 - 0.029 13.9 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase 3-HAO PF06052.7 AJA93120.1 - 0.052 12.9 0.1 0.082 12.3 0.0 1.4 1 1 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase Ectoine_synth PF06339.7 AJA93120.1 - 0.078 12.8 0.0 0.11 12.3 0.0 1.2 1 1 0 1 1 1 0 Ectoine synthase DUF3575 PF12099.3 AJA93120.1 - 0.1 11.7 0.2 0.14 11.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3575) Methyltransf_18 PF12847.2 AJA93121.1 - 0.0018 18.8 0.0 0.003 18.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 AJA93121.1 - 0.022 14.3 0.1 0.035 13.7 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.1 AJA93121.1 - 0.055 13.1 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain B5 PF03484.10 AJA93122.1 - 4.9e-18 64.7 1.6 6.3e-14 51.5 0.0 3.2 4 0 0 4 4 4 2 tRNA synthetase B5 domain B3_4 PF03483.12 AJA93122.1 - 4.7e-14 52.2 0.4 8.7e-14 51.3 0.3 1.4 1 0 0 1 1 1 1 B3/4 domain AIRS_C PF02769.17 AJA93123.1 - 1.5e-21 77.0 0.0 2.6e-21 76.2 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 AJA93123.1 - 9.5e-18 64.2 0.4 2.8e-17 62.7 0.3 1.8 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain Lyase_1 PF00206.15 AJA93125.1 - 4.5e-46 157.4 0.5 6.9e-46 156.8 0.3 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 AJA93125.1 - 5.9e-18 64.6 0.0 1.9e-17 63.0 0.0 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus B12-binding PF02310.14 AJA93126.1 - 3.7e-18 65.5 0.1 4.5e-18 65.2 0.1 1.0 1 0 0 1 1 1 1 B12 binding domain Ocnus PF05005.10 AJA93126.1 - 0.0024 17.7 0.0 0.0032 17.3 0.0 1.2 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) Glyco_transf_28 PF03033.15 AJA93126.1 - 0.025 14.3 0.1 0.033 13.9 0.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain IMPDH PF00478.20 AJA93126.1 - 0.085 11.7 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PcrB PF01884.12 AJA93126.1 - 0.13 11.4 1.7 0.42 9.8 0.2 1.9 1 1 1 2 2 2 0 PcrB family StbA PF06406.6 AJA93126.1 - 0.14 11.0 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 StbA protein Glycos_transf_2 PF00535.21 AJA93127.1 - 3.1e-26 92.0 0.1 4e-26 91.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 AJA93127.1 - 1.3e-11 44.7 0.0 3.3e-11 43.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 AJA93127.1 - 0.0028 16.7 0.1 0.0041 16.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 RVT_3 PF13456.1 AJA93127.1 - 0.035 13.8 0.0 0.18 11.6 0.0 2.0 2 0 0 2 2 2 0 Reverse transcriptase-like MT-A70 PF05063.9 AJA93127.1 - 0.069 12.7 0.1 0.19 11.2 0.0 1.8 2 0 0 2 2 2 0 MT-A70 Ribul_P_3_epim PF00834.14 AJA93127.1 - 0.094 11.8 0.0 0.58 9.2 0.0 2.0 1 1 1 2 2 2 0 Ribulose-phosphate 3 epimerase family Glyco_tranf_2_4 PF13704.1 AJA93127.1 - 0.1 12.9 0.0 0.17 12.2 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 2 AAA_18 PF13238.1 AJA93128.1 - 5.2e-14 52.6 0.0 6.6e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 AJA93128.1 - 1.3e-10 42.1 0.0 1.9e-10 41.5 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 AJA93128.1 - 1.4e-10 41.4 0.0 1.8e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Cytidylate kinase-like family SKI PF01202.17 AJA93128.1 - 1.1e-05 25.3 0.4 5.7e-05 23.0 0.3 2.0 1 1 0 1 1 1 1 Shikimate kinase ADK PF00406.17 AJA93128.1 - 2.1e-05 24.4 0.1 8e-05 22.5 0.0 2.0 2 1 0 2 2 2 1 Adenylate kinase AAA PF00004.24 AJA93128.1 - 8.8e-05 22.7 0.1 0.00029 21.0 0.1 1.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 AJA93128.1 - 0.00044 20.1 0.0 0.0016 18.3 0.0 1.8 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.5 AJA93128.1 - 0.0007 18.8 0.8 0.016 14.4 0.0 2.2 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA_28 PF13521.1 AJA93128.1 - 0.00093 19.1 0.0 0.002 18.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.17 AJA93128.1 - 0.0048 17.0 0.0 0.0078 16.3 0.0 1.5 1 0 0 1 1 1 1 RNA helicase Zeta_toxin PF06414.7 AJA93128.1 - 0.0073 15.4 0.0 0.015 14.4 0.0 1.5 1 1 0 1 1 1 1 Zeta toxin RuvB_N PF05496.7 AJA93128.1 - 0.014 14.4 0.0 0.023 13.7 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 AJA93128.1 - 0.016 15.1 0.3 0.048 13.5 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.1 AJA93128.1 - 0.016 15.3 0.0 0.034 14.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 AJA93128.1 - 0.019 14.6 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_19 PF13245.1 AJA93128.1 - 0.031 14.0 0.0 0.06 13.1 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_16 PF13191.1 AJA93128.1 - 0.047 13.6 0.0 0.071 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.16 AJA93128.1 - 0.093 11.8 0.0 8.6 5.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Nif11 PF07862.6 AJA93128.1 - 0.22 11.5 1.7 16 5.5 0.0 3.3 3 0 0 3 3 3 0 Nitrogen fixation protein of unknown function Polyketide_cyc2 PF10604.4 AJA93129.1 - 0.055 13.6 0.0 0.058 13.5 0.0 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Ribosomal_L30 PF00327.15 AJA93130.1 - 1.5e-13 50.1 0.1 2.2e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e DUF885 PF05960.6 AJA93130.1 - 0.025 13.7 0.0 0.027 13.6 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) UFD1 PF03152.9 AJA93130.1 - 0.13 11.3 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 NMO PF03060.10 AJA93132.1 - 0.16 11.0 3.8 0.2 10.7 2.6 1.0 1 0 0 1 1 1 0 Nitronate monooxygenase Ribosomal_S9 PF00380.14 AJA93133.1 - 3e-34 117.8 0.3 3.4e-34 117.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L29 PF00831.18 AJA93134.1 - 1.3e-12 47.2 7.9 1.4e-12 47.0 5.4 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Snapin_Pallidin PF14712.1 AJA93134.1 - 0.00037 20.7 5.0 0.00043 20.5 3.5 1.1 1 0 0 1 1 1 1 Snapin/Pallidin Ran-binding PF05508.6 AJA93134.1 - 0.02 13.7 2.7 0.022 13.6 1.9 1.0 1 0 0 1 1 1 0 RanGTP-binding protein DUF1192 PF06698.6 AJA93134.1 - 0.056 13.2 3.9 0.38 10.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Vps5 PF09325.5 AJA93134.1 - 0.063 12.5 4.6 0.065 12.4 3.2 1.1 1 0 0 1 1 1 0 Vps5 C terminal like DUF1843 PF08898.5 AJA93134.1 - 0.11 12.5 2.8 0.87 9.6 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1843) Bacillus_HBL PF05791.6 AJA93134.1 - 0.14 11.5 1.5 0.15 11.3 1.0 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) FemAB PF02388.11 AJA93134.1 - 0.15 10.7 3.6 0.16 10.6 2.5 1.0 1 0 0 1 1 1 0 FemAB family Spc7 PF08317.6 AJA93134.1 - 0.15 10.6 4.8 0.17 10.5 3.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4061 PF13270.1 AJA93134.1 - 0.21 11.7 2.5 0.29 11.2 1.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) DivIC PF04977.10 AJA93134.1 - 0.32 10.5 4.4 3.4 7.2 0.4 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF2205 PF10224.4 AJA93134.1 - 0.56 9.8 4.9 6.3 6.4 0.4 2.1 1 1 1 2 2 2 0 Predicted coiled-coil protein (DUF2205) DUF4200 PF13863.1 AJA93134.1 - 0.62 10.0 6.6 0.86 9.5 4.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Fmp27_WPPW PF10359.4 AJA93134.1 - 0.64 8.3 4.5 0.72 8.2 3.1 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain LURAP PF14854.1 AJA93134.1 - 0.79 9.4 2.9 2.1 8.0 0.3 1.9 1 1 1 2 2 2 0 Leucine rich adaptor protein Shugoshin_N PF07558.6 AJA93134.1 - 0.91 9.2 4.9 8.9 6.1 0.5 2.4 1 1 1 2 2 2 0 Shugoshin N-terminal coiled-coil region Enkurin PF13864.1 AJA93134.1 - 1.2 9.3 6.0 1.4 9.1 4.2 1.1 1 0 0 1 1 1 0 Calmodulin-binding Transposase_22 PF02994.9 AJA93134.1 - 3.2 6.1 9.3 3.4 6.0 6.4 1.0 1 0 0 1 1 1 0 L1 transposable element TFIIH_BTF_p62_N PF08567.6 AJA93135.1 - 0.029 14.0 0.5 0.052 13.1 0.3 1.4 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain Sec8_exocyst PF04048.9 AJA93135.1 - 0.037 13.6 0.8 0.18 11.4 0.1 2.0 2 0 0 2 2 2 0 Sec8 exocyst complex component specific domain Tetraspannin PF00335.15 AJA93136.1 - 0.0016 17.7 1.1 0.0021 17.3 0.7 1.1 1 0 0 1 1 1 1 Tetraspanin family Neurensin PF14927.1 AJA93136.1 - 0.0081 15.5 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Neurensin YtpI PF14007.1 AJA93136.1 - 0.011 15.6 2.2 0.12 12.3 0.2 2.1 2 0 0 2 2 2 0 YtpI-like protein DUF4064 PF13273.1 AJA93136.1 - 0.018 15.0 1.3 0.025 14.6 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Virul_fac_BrkB PF03631.10 AJA93136.1 - 0.052 12.9 0.3 0.061 12.6 0.2 1.0 1 0 0 1 1 1 0 Virulence factor BrkB DUF2107 PF09880.4 AJA93136.1 - 0.15 11.9 1.4 0.16 11.8 0.1 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2107) DUF3975 PF13126.1 AJA93136.1 - 0.17 12.0 2.0 10 6.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3975) DUF308 PF03729.8 AJA93136.1 - 0.23 11.4 5.9 3.3 7.7 0.2 2.1 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) P12 PF12669.2 AJA93136.1 - 0.53 10.5 2.3 1 9.6 0.0 2.0 2 0 0 2 2 2 0 Virus attachment protein p12 family DUF350 PF03994.9 AJA93136.1 - 0.58 9.9 3.7 1.4 8.7 0.3 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF350) 7TMR-DISM_7TM PF07695.6 AJA93136.1 - 0.73 9.4 6.8 0.26 10.9 1.1 2.0 1 1 1 2 2 2 0 7TM diverse intracellular signalling DUF3899 PF13038.1 AJA93136.1 - 8.2 6.6 12.2 8.3 6.6 1.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) TatD_DNase PF01026.16 AJA93137.1 - 4.8e-45 153.7 0.0 5.4e-45 153.5 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase NTP_transf_3 PF12804.2 AJA93138.1 - 2.1e-17 63.6 0.0 2.4e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 AJA93138.1 - 1.1e-10 41.3 0.0 1.6e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 AJA93138.1 - 0.00032 20.0 0.0 0.00046 19.5 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase CTP_transf_3 PF02348.14 AJA93138.1 - 0.001 18.7 0.1 0.0088 15.6 0.1 2.1 1 1 0 1 1 1 1 Cytidylyltransferase CofC PF01983.11 AJA93138.1 - 0.0035 16.3 0.8 0.0035 16.3 0.6 1.6 2 0 0 2 2 2 1 Guanylyl transferase CofC like IMPDH PF00478.20 AJA93140.1 - 4.5e-135 450.0 5.9 5.1e-135 449.8 4.1 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 AJA93140.1 - 1.1e-23 82.7 0.9 1.6e-11 43.7 0.1 2.5 2 0 0 2 2 2 2 CBS domain NMO PF03060.10 AJA93140.1 - 4.4e-10 39.2 5.4 2.9e-05 23.3 2.8 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 AJA93140.1 - 1.5e-06 27.3 4.4 2.9e-06 26.3 2.6 1.5 1 1 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 AJA93140.1 - 0.00011 21.5 5.5 0.0049 16.1 0.0 3.1 2 1 2 4 4 4 2 Histidine biosynthesis protein DHO_dh PF01180.16 AJA93140.1 - 0.00024 20.1 0.6 0.00024 20.1 0.4 2.1 1 1 1 2 2 2 1 Dihydroorotate dehydrogenase QRPTase_C PF01729.14 AJA93140.1 - 0.00024 20.6 0.7 0.3 10.5 0.0 3.3 3 0 0 3 3 3 1 Quinolinate phosphoribosyl transferase, C-terminal domain ThiG PF05690.9 AJA93140.1 - 0.0086 15.1 2.6 0.011 14.7 0.1 2.1 1 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG PEP_mutase PF13714.1 AJA93140.1 - 0.049 12.8 0.4 0.1 11.7 0.1 1.6 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase B12-binding PF02310.14 AJA93140.1 - 0.071 12.9 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 B12 binding domain DeoC PF01791.4 AJA93140.1 - 0.61 9.3 7.2 11 5.2 5.0 2.4 1 1 0 1 1 1 0 DeoC/LacD family aldolase TGS PF02824.16 AJA93141.1 - 5.6e-21 74.1 0.1 2e-20 72.3 0.0 2.0 2 0 0 2 2 2 1 TGS domain MMR_HSR1 PF01926.18 AJA93141.1 - 8.5e-20 70.8 1.1 2.4e-19 69.4 0.0 2.1 2 1 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 AJA93141.1 - 1.1e-16 60.4 4.6 6.5e-14 51.5 0.1 2.7 3 0 0 3 3 3 2 Ferrous iron transport protein B DUF258 PF03193.11 AJA93141.1 - 0.00029 20.0 0.3 0.0017 17.5 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Arf PF00025.16 AJA93141.1 - 0.0017 17.6 1.6 0.097 11.9 0.0 2.4 2 0 0 2 2 2 1 ADP-ribosylation factor family Dynamin_N PF00350.18 AJA93141.1 - 0.0023 17.7 8.4 0.094 12.5 0.3 3.1 4 0 0 4 4 4 2 Dynamin family ArgK PF03308.11 AJA93141.1 - 0.0032 16.2 0.5 0.05 12.3 0.2 2.4 2 1 0 2 2 2 1 ArgK protein Miro PF08477.8 AJA93141.1 - 0.0036 17.8 0.2 0.017 15.6 0.0 2.2 2 0 0 2 2 2 1 Miro-like protein SRPRB PF09439.5 AJA93141.1 - 0.0053 15.9 0.1 0.0053 15.9 0.1 2.1 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit Ras PF00071.17 AJA93141.1 - 0.0076 15.6 6.5 0.078 12.3 0.2 2.8 3 0 0 3 3 3 2 Ras family GSHPx PF00255.14 AJA93141.1 - 0.016 14.5 0.0 0.031 13.6 0.0 1.5 1 0 0 1 1 1 0 Glutathione peroxidase GTP_EFTU PF00009.22 AJA93141.1 - 0.02 14.3 5.6 0.45 9.9 0.2 3.4 3 1 0 3 3 3 0 Elongation factor Tu GTP binding domain AAA_22 PF13401.1 AJA93141.1 - 0.029 14.5 0.0 0.21 11.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.4 AJA93141.1 - 0.029 13.8 1.1 7.7 6.0 0.0 3.1 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_33 PF13671.1 AJA93141.1 - 0.049 13.5 0.3 0.15 11.9 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.1 AJA93141.1 - 0.07 13.1 0.0 0.19 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.1 AJA93141.1 - 0.081 12.8 0.2 0.081 12.8 0.2 1.9 2 0 0 2 2 2 0 AAA domain CheW PF01584.14 AJA93141.1 - 0.086 12.3 0.0 0.18 11.2 0.0 1.5 1 0 0 1 1 1 0 CheW-like domain cobW PF02492.14 AJA93141.1 - 0.21 11.0 4.8 2.3 7.6 0.5 2.7 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Epimerase PF01370.16 AJA93142.1 - 2.6e-32 112.1 0.0 3.3e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 AJA93142.1 - 4.8e-21 74.8 0.0 6.9e-21 74.3 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 AJA93142.1 - 2.2e-15 56.3 0.0 3.2e-15 55.8 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 AJA93142.1 - 2.2e-14 52.8 0.0 3.2e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 AJA93142.1 - 5.3e-08 33.0 0.0 6.6e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_4 PF07993.7 AJA93142.1 - 4.7e-06 25.7 0.3 4.6e-05 22.4 0.2 2.5 1 1 0 1 1 1 1 Male sterility protein Saccharop_dh PF03435.13 AJA93142.1 - 2.3e-05 23.5 0.0 3.5e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase adh_short PF00106.20 AJA93142.1 - 0.00011 22.1 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 AJA93142.1 - 0.00012 21.3 0.1 0.00019 20.7 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family KR PF08659.5 AJA93142.1 - 0.00082 19.0 0.0 0.002 17.8 0.0 1.6 1 1 0 1 1 1 1 KR domain Methyltransf_25 PF13649.1 AJA93142.1 - 0.15 12.4 0.0 0.74 10.2 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain Ribosomal_S25 PF03297.10 AJA93143.1 - 1.8e-06 27.9 5.0 1.9e-06 27.8 3.4 1.0 1 0 0 1 1 1 1 S25 ribosomal protein TrmB PF01978.14 AJA93143.1 - 0.005 16.5 0.0 0.0062 16.2 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 AJA93143.1 - 0.0057 16.3 0.1 0.0057 16.3 0.1 1.8 2 0 0 2 2 2 1 MarR family LacI PF00356.16 AJA93143.1 - 0.0064 16.0 0.1 0.013 15.0 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_24 PF13412.1 AJA93143.1 - 0.0078 15.5 0.1 0.011 15.1 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF977 PF06163.6 AJA93143.1 - 0.018 14.7 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) SID-1_RNA_chan PF13965.1 AJA93143.1 - 0.025 12.7 2.6 0.029 12.5 1.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 EAP30 PF04157.11 AJA93143.1 - 0.029 13.5 0.1 0.041 13.0 0.1 1.3 1 1 0 1 1 1 0 EAP30/Vps36 family MarR_2 PF12802.2 AJA93143.1 - 0.036 13.7 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_10 PF04967.7 AJA93143.1 - 0.046 13.3 0.2 0.069 12.7 0.2 1.3 1 0 0 1 1 1 0 HTH DNA binding domain DUF2624 PF11116.3 AJA93143.1 - 0.11 13.0 0.7 0.16 12.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) HTH_Crp_2 PF13545.1 AJA93143.1 - 0.13 12.0 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF3173 PF11372.3 AJA93143.1 - 0.13 11.8 1.4 0.25 10.9 1.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3173) DUF4550 PF15084.1 AJA93144.1 - 0.087 12.9 1.2 6 7.0 0.0 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4550) UDPG_MGDP_dh_N PF03721.9 AJA93145.1 - 2.1e-43 147.8 0.1 5.8e-43 146.4 0.0 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.10 AJA93145.1 - 1.9e-22 79.3 0.0 1.4e-21 76.6 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.14 AJA93145.1 - 1.2e-18 67.1 0.1 2.5e-18 66.0 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain 2-Hacid_dh_C PF02826.14 AJA93145.1 - 2.5e-06 26.7 0.1 0.12 11.5 0.0 3.2 3 0 0 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 AJA93145.1 - 4.4e-05 23.2 0.1 0.0008 19.1 0.0 2.8 3 0 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 AJA93145.1 - 0.0001 22.2 0.0 0.00041 20.2 0.0 2.0 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ThiF PF00899.16 AJA93145.1 - 0.00047 19.9 1.7 0.019 14.7 0.2 3.0 2 1 0 2 2 2 1 ThiF family 3HCDH_N PF02737.13 AJA93145.1 - 0.00074 19.2 0.0 0.0017 18.0 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 AJA93145.1 - 0.0057 16.1 0.0 0.011 15.1 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.13 AJA93145.1 - 0.0094 15.9 0.3 0.23 11.4 0.0 2.9 3 0 0 3 3 3 1 TrkA-N domain NAD_binding_11 PF14833.1 AJA93145.1 - 0.0095 15.9 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AlaDh_PNT_C PF01262.16 AJA93145.1 - 0.055 13.0 0.0 0.15 11.6 0.0 1.7 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Peptidase_S24 PF00717.18 AJA93146.1 - 3.8e-07 29.6 2.6 9.4e-07 28.3 0.2 2.4 2 0 0 2 2 2 1 Peptidase S24-like TrbC PF04956.8 AJA93146.1 - 0.01 15.7 5.0 0.03 14.3 0.6 2.2 2 0 0 2 2 2 0 TrbC/VIRB2 family Ureide_permease PF07168.6 AJA93146.1 - 0.016 13.8 0.1 0.024 13.3 0.1 1.2 1 0 0 1 1 1 0 Ureide permease DUF1510 PF07423.6 AJA93146.1 - 0.26 10.6 15.4 0.019 14.3 5.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1510) GTP_EFTU PF00009.22 AJA93147.1 - 2.5e-56 190.1 0.7 4.4e-56 189.3 0.5 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 AJA93147.1 - 2.5e-26 91.5 0.0 9.4e-26 89.7 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.1 AJA93147.1 - 4.7e-21 74.4 0.5 1.1e-20 73.2 0.4 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.19 AJA93147.1 - 1.4e-20 72.8 0.0 4.5e-20 71.3 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.20 AJA93147.1 - 4e-15 55.6 0.3 1.2e-14 54.1 0.2 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 UBA PF00627.26 AJA93147.1 - 0.076 12.8 0.0 5.8 6.9 0.0 2.9 2 0 0 2 2 2 0 UBA/TS-N domain Fe-S_biosyn PF01521.15 AJA93148.1 - 2.2e-22 79.1 0.0 3.1e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis GTP_EFTU PF00009.22 AJA93149.1 - 9.3e-48 162.1 0.0 1.3e-47 161.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 AJA93149.1 - 1.2e-29 102.3 0.2 3.4e-29 100.9 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 AJA93149.1 - 3.8e-18 65.3 0.3 1.3e-17 63.6 0.2 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 AJA93149.1 - 5.4e-08 32.3 0.1 1.1e-07 31.3 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.18 AJA93149.1 - 0.01 15.7 0.0 0.027 14.4 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase NIF3 PF01784.13 AJA93149.1 - 0.016 14.7 0.1 0.031 13.8 0.0 1.5 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) DHQS PF01959.11 AJA93150.1 - 1.4e-113 379.2 2.2 1.6e-113 378.9 1.6 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) Hint PF01079.15 AJA93150.1 - 0.098 11.8 0.0 9.8 5.3 0.0 2.4 2 0 0 2 2 2 0 Hint module Vps8 PF12816.2 AJA93150.1 - 0.14 11.3 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Golgi CORVET complex core vacuolar protein 8 HSDR_N PF04313.9 AJA93151.1 - 0.029 14.1 0.8 0.033 13.9 0.5 1.0 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Ribosomal_S30AE PF02482.14 AJA93151.1 - 0.048 14.1 1.6 0.055 13.9 1.1 1.1 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein DUF2089 PF09862.4 AJA93151.1 - 0.066 13.0 0.7 0.088 12.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) DUF3802 PF12290.3 AJA93151.1 - 0.072 13.3 0.5 1.3 9.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3802) Muted PF14942.1 AJA93152.1 - 0.46 10.3 6.5 0.38 10.6 1.8 2.4 1 1 0 2 2 2 0 Organelle biogenesis, Muted-like protein IncA PF04156.9 AJA93152.1 - 1.8 8.1 10.1 0.22 11.0 2.2 2.3 2 0 0 2 2 2 0 IncA protein Viral_P18 PF04521.8 AJA93152.1 - 5.2 6.5 5.9 3.2 7.2 0.7 2.3 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein zf-AN1 PF01428.11 AJA93153.1 - 1.1e-12 47.6 5.1 1.4e-12 47.2 3.5 1.1 1 0 0 1 1 1 1 AN1-like Zinc finger UPF1_Zn_bind PF09416.5 AJA93153.1 - 0.15 11.6 0.9 0.17 11.4 0.6 1.1 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) Tnp_zf-ribbon_2 PF13842.1 AJA93153.1 - 1.8 9.0 5.0 3.2 8.2 3.5 1.5 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon DFP PF04127.10 AJA93154.1 - 5.4e-58 195.6 5.0 1.4e-56 191.0 3.8 2.2 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 AJA93154.1 - 8.6e-27 93.3 0.3 8.6e-27 93.3 0.2 2.6 2 1 0 2 2 2 1 Flavoprotein NAD_binding_10 PF13460.1 AJA93154.1 - 0.0002 21.4 0.1 0.0004 20.4 0.1 1.5 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_7 PF13241.1 AJA93154.1 - 0.0042 17.3 2.0 0.12 12.6 0.3 2.9 2 1 0 2 2 2 1 Putative NAD(P)-binding BRCT PF00533.21 AJA93154.1 - 0.05 13.7 0.1 0.35 11.0 0.0 2.5 2 1 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain Ribosomal_L1 PF00687.16 AJA93155.1 - 3e-44 150.9 1.3 3.7e-44 150.6 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family PTPS PF01242.14 AJA93156.1 - 9.2e-27 93.1 0.1 1e-26 93.0 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase VWA_2 PF13519.1 AJA93157.1 - 1.4e-06 28.5 0.0 2.5e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 AJA93157.1 - 4.7e-06 26.4 0.0 1.4e-05 24.8 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain vWA-TerF-like PF10138.4 AJA93157.1 - 0.00017 21.5 0.1 0.0028 17.5 0.0 2.8 2 1 0 2 2 2 1 vWA found in TerF C terminus VWA_3 PF13768.1 AJA93157.1 - 0.012 15.2 0.0 0.041 13.5 0.0 1.9 3 0 0 3 3 3 0 von Willebrand factor type A domain Myb_DNA-bind_2 PF08914.6 AJA93157.1 - 0.017 14.9 0.1 0.041 13.6 0.0 1.6 1 0 0 1 1 1 0 Rap1 Myb domain UPF0182 PF03699.8 AJA93159.1 - 0.087 10.7 2.0 0.11 10.4 1.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF1418 PF07214.7 AJA93159.1 - 0.25 10.9 2.5 0.87 9.2 0.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) Caveolin PF01146.12 AJA93159.1 - 1.3 8.5 4.3 2.8 7.5 3.0 1.5 1 0 0 1 1 1 0 Caveolin DUF2383 PF09537.5 AJA93160.1 - 0.018 15.2 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) TSC22 PF01166.13 AJA93160.1 - 0.14 12.1 2.3 0.28 11.1 1.6 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family ADH_N PF08240.7 AJA93161.1 - 3e-22 78.4 1.6 6.4e-22 77.3 1.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 AJA93161.1 - 4.2e-19 68.3 0.1 6.1e-19 67.8 0.1 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 AJA93161.1 - 0.00017 22.4 0.2 0.00028 21.7 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Reo_sigmaC PF04582.7 AJA93162.1 - 0.0047 16.1 1.4 0.0047 16.1 1.0 1.4 2 0 0 2 2 2 1 Reovirus sigma C capsid protein DUF4388 PF14332.1 AJA93162.1 - 0.018 14.8 0.0 0.2 11.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4388) AmoC PF04896.7 AJA93163.1 - 8.2e-15 54.5 5.0 1e-14 54.1 3.5 1.1 1 0 0 1 1 1 1 Ammonia monooxygenase/methane monooxygenase, subunit C Pro_isomerase PF00160.16 AJA93164.1 - 2.3e-47 161.0 0.0 2.6e-47 160.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AAA_18 PF13238.1 AJA93165.1 - 6.8e-13 49.0 0.7 6.8e-13 49.0 0.5 1.9 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 AJA93165.1 - 5.2e-07 30.5 0.2 7.4e-07 30.0 0.1 1.3 1 1 0 1 1 1 1 AAA domain RVT_connect PF06815.8 AJA93165.1 - 0.0051 16.6 0.6 2 8.3 0.0 2.1 1 1 1 2 2 2 2 Reverse transcriptase connection domain NTPase_1 PF03266.10 AJA93165.1 - 0.037 13.7 0.0 0.17 11.6 0.0 2.0 2 0 0 2 2 2 0 NTPase Sigma54_activ_2 PF14532.1 AJA93165.1 - 0.041 13.9 0.0 0.11 12.5 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA PF00004.24 AJA93165.1 - 0.045 13.9 0.3 0.15 12.2 0.2 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 AJA93165.1 - 0.062 13.4 0.1 0.34 11.0 0.0 2.0 2 1 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 AJA93165.1 - 0.086 12.3 0.0 0.32 10.4 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain NHL PF01436.16 AJA93166.1 - 0.024 14.5 0.0 0.073 13.0 0.0 1.8 1 0 0 1 1 1 0 NHL repeat PDZ PF00595.19 AJA93166.1 - 0.067 13.3 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 PDZ domain (Also known as DHR or GLGF) Copper-bind PF00127.15 AJA93166.1 - 0.078 13.2 0.0 0.51 10.5 0.0 2.2 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 AJA93166.1 - 0.084 12.7 0.0 0.34 10.8 0.0 2.0 2 1 0 2 2 2 0 Cupredoxin-like domain Sulfotransfer_1 PF00685.22 AJA93168.1 - 2.9e-22 79.2 1.9 3.7e-22 78.8 1.3 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.1 AJA93168.1 - 5.7e-05 24.0 0.0 0.00025 22.0 0.0 1.9 1 1 0 1 1 1 1 Sulfotransferase family Sulfotransfer_2 PF03567.9 AJA93168.1 - 0.00022 21.0 1.6 0.00054 19.7 1.1 1.6 1 1 0 1 1 1 1 Sulfotransferase family SRPRB PF09439.5 AJA93168.1 - 0.013 14.6 0.0 0.033 13.4 0.0 1.6 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit MazG-like PF12643.2 AJA93168.1 - 0.081 12.8 0.1 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 MazG-like family PduV-EutP PF10662.4 AJA93168.1 - 0.088 12.2 0.0 0.17 11.4 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Radical_SAM PF04055.16 AJA93169.1 - 1.7e-19 70.5 0.0 1.3e-18 67.7 0.0 2.2 2 1 1 3 3 3 1 Radical SAM superfamily DUF849 PF05853.7 AJA93169.1 - 0.0017 17.3 0.0 0.021 13.6 0.0 2.2 2 0 0 2 2 2 1 Prokaryotic protein of unknown function (DUF849) Fer4_14 PF13394.1 AJA93169.1 - 0.012 15.6 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain Peripla_BP_6 PF13458.1 AJA93169.1 - 0.057 12.7 0.0 0.093 12.0 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein Thioredoxin_4 PF13462.1 AJA93170.1 - 2.6e-32 112.0 0.2 3.1e-32 111.8 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 AJA93170.1 - 6.2e-17 61.7 0.1 1.2e-15 57.5 0.0 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 AJA93170.1 - 7.3e-13 48.6 0.5 3.9e-12 46.3 0.4 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.1 AJA93170.1 - 1.4e-06 27.9 0.1 2.6e-06 27.1 0.0 1.5 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.1 AJA93170.1 - 0.013 15.5 1.2 0.097 12.8 0.8 2.3 1 1 0 1 1 1 0 Thioredoxin-like Thioredoxin PF00085.15 AJA93170.1 - 0.02 14.5 0.0 0.44 10.2 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin Ammonium_transp PF00909.16 AJA93171.1 - 3e-111 371.7 31.4 3.3e-111 371.5 21.8 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Thioredoxin PF00085.15 AJA93172.1 - 3.4e-31 107.0 0.1 5.1e-31 106.4 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 AJA93172.1 - 3e-10 40.0 0.7 1.6e-07 31.3 0.0 2.7 2 1 1 3 3 3 2 Thioredoxin-like Thioredoxin_2 PF13098.1 AJA93172.1 - 2.4e-09 37.3 0.9 1.4e-08 34.9 0.2 2.2 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_9 PF14595.1 AJA93172.1 - 1.4e-07 31.1 0.6 1.8e-07 30.7 0.4 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.1 AJA93172.1 - 1.2e-05 25.0 0.2 4.3e-05 23.2 0.0 1.9 2 1 1 3 3 3 1 Thioredoxin domain Redoxin PF08534.5 AJA93172.1 - 2.4e-05 23.9 0.1 0.0001 21.8 0.0 1.7 1 1 1 2 2 2 1 Redoxin Phosducin PF02114.11 AJA93172.1 - 0.00014 20.6 0.0 0.00017 20.4 0.0 1.0 1 0 0 1 1 1 1 Phosducin Thioredoxin_7 PF13899.1 AJA93172.1 - 0.00024 21.0 0.1 0.00039 20.3 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.16 AJA93172.1 - 0.00036 20.2 0.1 0.0013 18.4 0.1 1.8 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_6 PF13848.1 AJA93172.1 - 0.0047 16.7 0.5 0.013 15.2 0.3 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.9 AJA93172.1 - 0.01 16.1 0.1 0.042 14.0 0.0 2.0 1 1 1 2 2 2 1 Glutaredoxin-like domain (DUF836) HyaE PF07449.6 AJA93172.1 - 0.035 14.0 0.1 0.12 12.2 0.0 1.8 2 0 0 2 2 2 0 Hydrogenase-1 expression protein HyaE DSBA PF01323.15 AJA93172.1 - 0.72 9.3 2.8 8.8 5.8 0.1 2.6 2 1 1 3 3 3 0 DSBA-like thioredoxin domain RNA_pol_Rpb1_4 PF05000.12 AJA93172.1 - 2.4 7.9 5.9 3.5 7.4 1.7 2.1 2 0 0 2 2 2 0 RNA polymerase Rpb1, domain 4 Pribosyltran PF00156.22 AJA93173.1 - 9.5e-11 41.5 0.9 2.9e-10 39.9 0.6 1.8 1 1 0 1 1 1 1 Phosphoribosyl transferase domain Thioredoxin_4 PF13462.1 AJA93174.1 - 1.1e-32 113.2 0.0 1.4e-32 112.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 AJA93174.1 - 1.7e-09 37.5 0.3 7.2e-08 32.2 0.2 2.1 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 AJA93174.1 - 2.6e-06 27.6 0.0 6.7e-06 26.2 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 AJA93174.1 - 0.0019 18.2 0.0 0.087 12.9 0.0 2.2 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_5 PF13743.1 AJA93174.1 - 0.059 12.9 0.0 0.085 12.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Fcf1 PF04900.7 AJA93176.1 - 4.2e-10 39.6 0.0 5.6e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 Fcf1 PIN PF01850.16 AJA93176.1 - 0.031 14.6 0.5 0.39 11.0 0.3 2.0 1 1 0 1 1 1 0 PIN domain HypA PF01155.14 AJA93176.1 - 0.038 13.6 0.0 0.062 12.9 0.0 1.3 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family PIN_4 PF13638.1 AJA93176.1 - 0.1 12.6 2.7 0.18 11.8 1.8 1.5 1 1 0 1 1 1 0 PIN domain Redoxin PF08534.5 AJA93177.1 - 2.3e-07 30.4 0.1 0.00045 19.7 0.0 2.2 1 1 0 2 2 2 2 Redoxin AhpC-TSA PF00578.16 AJA93177.1 - 6.1e-07 29.1 0.1 9.2e-05 22.1 0.0 2.5 2 1 0 2 2 2 2 AhpC/TSA family Thioredoxin_8 PF13905.1 AJA93177.1 - 0.0017 18.4 0.0 2.8 8.1 0.0 2.6 2 1 0 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.1 AJA93177.1 - 0.035 14.3 0.4 0.16 12.2 0.3 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain zf-ribbon_3 PF13248.1 AJA93178.1 - 0.00092 18.3 0.5 0.69 9.1 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain Chordopox_RPO7 PF05864.7 AJA93178.1 - 0.0018 18.3 1.9 0.0047 17.0 1.3 1.7 1 1 0 1 1 1 1 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) DZR PF12773.2 AJA93178.1 - 0.0024 17.6 1.5 0.0041 16.9 1.0 1.4 1 1 0 1 1 1 1 Double zinc ribbon zf-LITAF-like PF10601.4 AJA93178.1 - 0.0025 17.6 3.1 0.093 12.6 0.3 2.1 1 1 1 2 2 2 1 LITAF-like zinc ribbon domain zf-DNA_Pol PF08996.5 AJA93178.1 - 0.0049 16.2 1.6 0.0049 16.2 1.1 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger TF_Zn_Ribbon PF08271.7 AJA93178.1 - 0.0053 16.0 1.8 0.096 12.0 0.1 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding zf-TFIIB PF13453.1 AJA93178.1 - 0.0094 15.1 0.5 0.051 12.7 0.1 2.0 2 0 0 2 2 2 1 Transcription factor zinc-finger LIM PF00412.17 AJA93178.1 - 0.0095 15.9 0.3 0.015 15.3 0.2 1.4 1 1 0 1 1 1 1 LIM domain zinc_ribbon_2 PF13240.1 AJA93178.1 - 0.016 14.6 3.0 2.2 7.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.21 AJA93178.1 - 0.018 15.3 3.1 1.2 9.5 0.0 2.4 3 0 0 3 3 2 0 Zinc finger, C2H2 type zf-C3HC4_3 PF13920.1 AJA93178.1 - 0.021 14.4 3.3 0.037 13.7 2.3 1.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-CHY PF05495.7 AJA93178.1 - 0.025 14.7 1.6 0.031 14.4 1.1 1.1 1 0 0 1 1 1 0 CHY zinc finger zf-C2H2_4 PF13894.1 AJA93178.1 - 0.039 14.3 1.1 8.2 7.0 0.3 2.3 1 1 1 2 2 2 0 C2H2-type zinc finger DUF4428 PF14471.1 AJA93178.1 - 0.04 13.6 2.9 0.2 11.4 0.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4428) zinc-ribbons_6 PF07191.7 AJA93178.1 - 0.044 13.5 2.1 0.92 9.3 0.3 2.1 1 1 0 2 2 2 0 zinc-ribbons zf-C4_Topoisom PF01396.14 AJA93178.1 - 0.047 13.1 2.6 0.78 9.2 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Prok-RING_1 PF14446.1 AJA93178.1 - 0.048 13.3 1.1 1.9 8.3 0.1 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-FPG_IleRS PF06827.9 AJA93178.1 - 0.049 13.2 0.2 3.3 7.4 0.0 2.1 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-4CXXC_R1 PF10497.4 AJA93178.1 - 0.049 13.7 0.3 0.049 13.7 0.2 1.1 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-Di19 PF05605.7 AJA93178.1 - 0.065 13.3 1.7 2.4 8.3 0.1 2.1 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF4182 PF13790.1 AJA93178.1 - 0.068 12.9 0.7 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4182) Zn-ribbon_8 PF09723.5 AJA93178.1 - 0.072 13.0 2.6 0.52 10.3 1.8 2.0 1 1 0 1 1 1 0 Zinc ribbon domain HypA PF01155.14 AJA93178.1 - 0.073 12.7 0.4 0.091 12.4 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DUF4606 PF15379.1 AJA93178.1 - 0.079 13.0 0.4 0.09 12.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) Lar_restr_allev PF14354.1 AJA93178.1 - 0.087 13.1 0.9 2.7 8.3 0.0 1.9 1 1 0 1 1 1 0 Restriction alleviation protein Lar Stc1 PF12898.2 AJA93178.1 - 0.093 12.8 1.5 0.16 12.0 1.0 1.4 1 1 0 1 1 1 0 Stc1 domain zf-IS66 PF13005.2 AJA93178.1 - 0.13 12.3 0.2 7.2 6.6 0.0 2.1 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-C2HC5 PF06221.8 AJA93178.1 - 0.17 11.6 2.9 2.8 7.7 2.0 2.0 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type NOB1_Zn_bind PF08772.6 AJA93178.1 - 0.23 11.3 2.4 9.4 6.1 0.1 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Sgf11 PF08209.6 AJA93178.1 - 0.25 10.6 1.2 8.2 5.8 0.1 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Elf1 PF05129.8 AJA93178.1 - 0.29 10.8 3.6 3.8 7.2 1.1 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like TFIIS_C PF01096.13 AJA93178.1 - 0.31 10.7 2.1 9.1 6.0 0.0 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-TRAF PF02176.13 AJA93178.1 - 0.38 11.1 2.4 0.81 10.1 1.7 1.6 1 1 0 1 1 1 0 TRAF-type zinc finger DiS_P_DiS PF06750.8 AJA93178.1 - 0.41 10.4 2.0 4.7 7.0 0.2 2.0 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Zn_Tnp_IS1 PF03811.8 AJA93178.1 - 0.53 9.8 6.4 0.74 9.3 0.9 2.3 1 1 1 2 2 2 0 InsA N-terminal domain zinc_ribbon_5 PF13719.1 AJA93178.1 - 0.56 9.8 3.5 11 5.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF3133 PF11331.3 AJA93178.1 - 0.63 9.6 3.7 6.1 6.4 2.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3133) zinc_ribbon_4 PF13717.1 AJA93178.1 - 0.64 9.7 3.5 14 5.5 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2296 PF10058.4 AJA93178.1 - 1.1 9.1 3.4 2.6 7.8 2.3 1.6 1 1 0 1 1 1 0 Predicted integral membrane metal-binding protein (DUF2296) zf-NADH-PPase PF09297.6 AJA93178.1 - 1.1 8.8 3.8 5.5 6.5 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain YhfH PF14149.1 AJA93178.1 - 1.1 9.0 4.4 9 6.1 0.6 2.2 2 0 0 2 2 2 0 YhfH-like protein Zn_ribbon_recom PF13408.1 AJA93178.1 - 3.4 8.0 5.2 10 6.4 3.6 1.7 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain HPPK PF01288.15 AJA93179.1 - 0.081 12.6 0.5 0.17 11.5 0.3 1.6 1 1 0 1 1 1 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Polysacc_synt_3 PF13440.1 AJA93180.1 - 4.3e-07 29.6 42.2 1.2e-06 28.2 18.8 2.3 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 AJA93180.1 - 0.00019 21.2 10.0 0.00019 21.2 6.9 4.3 2 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.12 AJA93180.1 - 0.00085 18.6 32.8 0.00085 18.6 22.7 2.6 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein SNARE_assoc PF09335.6 AJA93181.1 - 1.9e-15 57.1 3.0 1.9e-15 57.1 2.1 2.6 2 1 1 3 3 3 1 SNARE associated Golgi protein Glycophorin_A PF01102.13 AJA93181.1 - 0.35 10.6 2.0 0.49 10.1 0.1 1.9 2 0 0 2 2 2 0 Glycophorin A IBR PF01485.16 AJA93183.1 - 0.00018 21.3 1.6 0.00028 20.7 1.1 1.3 1 0 0 1 1 1 1 IBR domain zf-DNL PF05180.7 AJA93183.1 - 0.0011 18.6 0.6 0.69 9.6 0.0 2.0 1 1 1 2 2 2 2 DNL zinc finger zinc_ribbon_5 PF13719.1 AJA93183.1 - 0.0028 17.2 5.2 0.023 14.2 3.5 2.0 1 1 1 2 2 2 2 zinc-ribbon domain zf-ISL3 PF14690.1 AJA93183.1 - 0.0037 17.2 0.3 1 9.4 0.0 2.1 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_4 PF13717.1 AJA93183.1 - 0.0048 16.5 5.8 0.15 11.7 3.8 2.2 1 1 1 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 AJA93183.1 - 0.0049 16.0 2.0 0.27 10.4 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain CpXC PF14353.1 AJA93183.1 - 0.0056 16.6 3.3 0.033 14.1 0.2 2.0 1 1 1 2 2 2 1 CpXC protein Zn_Tnp_IS91 PF14319.1 AJA93183.1 - 0.01 15.3 0.2 0.011 15.1 0.1 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain HypA PF01155.14 AJA93183.1 - 0.012 15.3 0.5 0.013 15.2 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Auto_anti-p27 PF06677.7 AJA93183.1 - 0.014 15.0 3.1 0.037 13.8 2.2 1.6 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Ribosomal_S27e PF01667.12 AJA93183.1 - 0.015 14.7 1.8 0.056 12.9 1.3 1.8 1 1 0 1 1 1 0 Ribosomal protein S27 OrfB_Zn_ribbon PF07282.6 AJA93183.1 - 0.029 14.0 1.8 0.041 13.5 1.2 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain PhnA_Zn_Ribbon PF08274.7 AJA93183.1 - 0.042 13.6 2.8 0.44 10.3 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DUF2387 PF09526.5 AJA93183.1 - 0.046 13.6 3.8 0.069 13.0 2.6 1.3 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Zn_Tnp_IS1 PF03811.8 AJA93183.1 - 0.071 12.6 1.0 9.5 5.8 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain Prok-RING_1 PF14446.1 AJA93183.1 - 0.094 12.4 1.6 0.14 11.9 1.1 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF2614 PF11023.3 AJA93183.1 - 0.096 12.4 0.7 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2614) ORC4_C PF14629.1 AJA93183.1 - 0.12 11.7 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus TerY-C PF15616.1 AJA93183.1 - 0.16 11.8 1.7 0.24 11.3 1.2 1.5 1 1 0 1 1 1 0 TerY-C metal binding domain Zn_Tnp_IS1595 PF12760.2 AJA93183.1 - 0.22 11.3 5.8 0.72 9.7 0.4 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.2 AJA93183.1 - 0.23 11.2 3.1 0.45 10.3 2.1 1.5 1 1 0 1 1 1 0 Double zinc ribbon Rubredoxin PF00301.15 AJA93183.1 - 0.26 11.2 2.0 12 5.8 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin Thioredoxin_3 PF13192.1 AJA93183.1 - 0.3 10.9 2.2 4.8 7.0 1.2 2.0 1 1 1 2 2 2 0 Thioredoxin domain DUF329 PF03884.9 AJA93183.1 - 0.4 10.2 4.7 4.5 6.9 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-RING_3 PF14369.1 AJA93183.1 - 0.49 10.4 5.9 1.1 9.2 0.3 2.2 1 1 1 2 2 2 0 zinc-finger zinc-ribbons_6 PF07191.7 AJA93183.1 - 0.53 10.1 3.4 1 9.1 2.4 1.5 1 1 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.5 AJA93183.1 - 0.8 9.7 6.0 5 7.1 4.2 2.0 1 1 0 1 1 1 0 Zinc ribbon domain Thioredoxin_2 PF13098.1 AJA93183.1 - 0.8 9.9 3.6 3.1 8.0 0.4 2.0 1 1 1 2 2 2 0 Thioredoxin-like domain TFIIS_C PF01096.13 AJA93183.1 - 0.92 9.1 3.6 6 6.5 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Ogr_Delta PF04606.7 AJA93183.1 - 1 9.0 4.8 2.8 7.6 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger UPF0547 PF10571.4 AJA93183.1 - 1.6 8.5 5.8 7.3 6.3 0.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF2082 PF09855.4 AJA93183.1 - 2.2 8.1 4.4 1.6 8.6 0.4 2.0 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-Di19 PF05605.7 AJA93183.1 - 2.2 8.4 6.3 1.2 9.3 1.0 2.1 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_4 PF14570.1 AJA93183.1 - 2.3 7.8 6.7 17 5.0 0.7 2.3 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain TF_Zn_Ribbon PF08271.7 AJA93183.1 - 4.8 6.5 6.7 16 4.8 4.3 1.9 1 1 1 2 2 2 0 TFIIB zinc-binding Glutaredoxin PF00462.19 AJA93183.1 - 5.3 7.1 5.8 2.5e+02 1.7 4.0 2.6 1 1 0 1 1 1 0 Glutaredoxin Opy2 PF09463.5 AJA93183.1 - 6.7 6.8 7.1 77 3.4 4.8 2.0 1 1 0 1 1 1 0 Opy2 protein Aminotran_5 PF00266.14 AJA93184.1 - 3.7e-152 506.3 0.1 4.2e-152 506.2 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 AJA93184.1 - 0.00016 20.9 0.0 0.00018 20.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 AJA93184.1 - 0.0011 18.0 0.0 0.0017 17.4 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SelA PF03841.8 AJA93184.1 - 0.024 13.3 0.0 0.038 12.7 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Prenyltransf PF01255.14 AJA93185.1 - 1.9e-78 262.6 0.5 2.1e-78 262.4 0.4 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Seryl_tRNA_N PF02403.17 AJA93185.1 - 0.048 13.6 0.7 0.086 12.8 0.3 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF1899 PF08953.6 AJA93186.1 - 0.0047 16.5 0.0 0.006 16.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) Transaldolase PF00923.14 AJA93187.1 - 6.4e-59 199.4 0.1 6e-58 196.2 0.1 2.2 1 1 0 1 1 1 1 Transaldolase FMN_dh PF01070.13 AJA93187.1 - 0.00035 19.5 0.1 0.00038 19.4 0.1 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glyoxalase_4 PF13669.1 AJA93188.1 - 8.7e-24 83.6 0.0 1e-23 83.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.20 AJA93188.1 - 1.4e-12 47.6 0.0 1.5e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.1 AJA93188.1 - 3.1e-10 40.2 0.0 3.4e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.2 AJA93188.1 - 1.5e-08 35.1 0.0 1.7e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Trypan_PARP PF05887.6 AJA93189.1 - 0.0011 18.8 3.2 0.0018 18.1 2.2 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) DNA_ligase_A_M PF01068.16 AJA93190.1 - 1.2e-55 188.0 2.3 1.2e-55 188.0 1.6 1.8 2 0 0 2 2 2 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 AJA93190.1 - 3e-51 173.7 2.5 3e-51 173.7 1.7 2.2 2 1 0 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 AJA93190.1 - 9.7e-22 77.1 0.0 2e-21 76.2 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.1 AJA93190.1 - 0.11 12.2 0.0 0.43 10.2 0.0 2.0 2 0 0 2 2 2 0 DNA ligase OB-like domain SIS_2 PF13580.1 AJA93191.1 - 8.9e-25 87.0 0.2 1.2e-24 86.5 0.1 1.2 1 0 0 1 1 1 1 SIS domain SIS PF01380.17 AJA93191.1 - 1.1e-10 41.2 0.2 1.2e-09 37.8 0.0 2.1 2 0 0 2 2 2 1 SIS domain Hydrolase_6 PF13344.1 AJA93191.1 - 0.0054 16.6 0.2 0.5 10.2 0.0 2.2 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase MAF_flag10 PF01973.13 AJA93191.1 - 0.017 14.6 0.1 0.25 10.8 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF115 SPOUT_MTase PF02590.12 AJA93191.1 - 0.034 13.8 0.5 3.2 7.4 0.1 2.2 1 1 0 2 2 2 0 Predicted SPOUT methyltransferase LuxS PF02664.10 AJA93191.1 - 0.078 12.5 0.0 0.18 11.3 0.0 1.7 1 0 0 1 1 1 0 S-Ribosylhomocysteinase (LuxS) HypD PF01924.11 AJA93191.1 - 0.1 11.3 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase formation hypA family ALIX_LYPXL_bnd PF13949.1 AJA93191.1 - 0.16 10.8 0.9 0.65 8.9 0.6 1.8 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV PhoU PF01895.14 AJA93192.1 - 3.6e-18 65.7 13.0 8.6e-17 61.3 0.7 2.8 3 0 0 3 3 3 2 PhoU domain Antitoxin-MazE PF04014.13 AJA93192.1 - 6e-06 25.8 0.0 2e-05 24.1 0.0 1.9 1 0 0 1 1 1 1 Antidote-toxin recognition MazE Aminotran_5 PF00266.14 AJA93193.1 - 1.2e-31 109.8 0.0 1.5e-31 109.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 AJA93193.1 - 0.0025 16.1 0.0 0.0036 15.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Radical_SAM PF04055.16 AJA93194.1 - 4.5e-10 39.9 0.0 9.6e-10 38.8 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Amidohydro_1 PF01979.15 AJA93194.1 - 0.029 14.0 0.0 0.052 13.2 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase family PGK PF00162.14 AJA93195.1 - 4.7e-112 374.3 1.3 5.4e-112 374.1 0.9 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Fe_dep_repress PF01325.14 AJA93196.1 - 7.4e-18 64.2 1.4 1.1e-17 63.7 0.5 1.6 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 AJA93196.1 - 7.4e-17 60.7 0.2 1.4e-16 59.9 0.0 1.6 2 0 0 2 2 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_27 PF13463.1 AJA93196.1 - 4.8e-06 26.7 0.0 3.3e-05 24.1 0.0 2.1 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_6 PF01418.12 AJA93196.1 - 0.00012 21.7 0.0 0.0034 17.0 0.0 2.5 1 1 1 2 2 2 1 Helix-turn-helix domain, rpiR family MarR_2 PF12802.2 AJA93196.1 - 0.00015 21.3 0.0 0.00027 20.5 0.0 1.4 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.11 AJA93196.1 - 0.00015 21.2 0.0 0.003 17.0 0.0 2.7 3 1 0 3 3 3 1 LexA DNA binding domain MarR PF01047.17 AJA93196.1 - 0.00032 20.3 0.0 0.00058 19.5 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 AJA93196.1 - 0.00051 19.6 0.1 0.001 18.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.4 AJA93196.1 - 0.00091 19.0 0.1 0.0016 18.3 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_45 PF14947.1 AJA93196.1 - 0.0028 17.4 0.8 0.0058 16.4 0.4 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_12 PF08461.5 AJA93196.1 - 0.003 17.2 0.0 0.007 16.0 0.0 1.8 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_Crp_2 PF13545.1 AJA93196.1 - 0.013 15.2 0.0 0.03 14.0 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF2624 PF11116.3 AJA93196.1 - 0.019 15.4 0.2 0.039 14.4 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2624) DUF2683 PF10884.3 AJA93196.1 - 0.02 14.8 0.9 0.28 11.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) HTH_24 PF13412.1 AJA93196.1 - 0.021 14.1 0.0 0.053 12.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TRM PF02005.11 AJA93196.1 - 0.027 13.4 0.1 0.044 12.6 0.1 1.3 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase DUF4423 PF14394.1 AJA93196.1 - 0.039 13.4 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) FeoC PF09012.5 AJA93196.1 - 0.05 13.3 0.0 0.17 11.6 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator Ribosomal_S19e PF01090.14 AJA93196.1 - 0.1 12.0 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S19e PAH PF02671.16 AJA93196.1 - 0.12 12.0 0.9 0.38 10.4 0.6 2.0 1 1 0 1 1 1 0 Paired amphipathic helix repeat HTH_5 PF01022.15 AJA93196.1 - 0.14 11.8 0.1 0.38 10.4 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Methyltransf_18 PF12847.2 AJA93197.1 - 9.9e-18 64.7 0.1 1.3e-17 64.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 AJA93197.1 - 3e-17 62.6 0.3 4.3e-17 62.1 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 AJA93197.1 - 5.2e-14 52.2 0.4 6.6e-14 51.9 0.3 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.8 AJA93197.1 - 3e-11 42.9 1.4 3.8e-11 42.6 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.13 AJA93197.1 - 1.6e-10 40.5 0.2 2.9e-10 39.6 0.1 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 AJA93197.1 - 4.5e-10 39.5 0.0 1.1e-09 38.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 AJA93197.1 - 1.4e-09 37.5 0.0 2.6e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.1 AJA93197.1 - 8.1e-09 35.7 0.0 1.4e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 AJA93197.1 - 2.2e-08 34.4 0.1 4.6e-08 33.4 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 AJA93197.1 - 3.1e-08 32.9 0.2 6.4e-08 31.8 0.0 1.6 2 0 0 2 2 2 1 Putative methyltransferase UPF0020 PF01170.13 AJA93197.1 - 3.4e-08 33.2 0.1 6.4e-08 32.3 0.0 1.4 2 0 0 2 2 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.7 AJA93197.1 - 6.9e-08 32.8 0.0 1.3e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 AJA93197.1 - 9e-08 31.5 0.1 1.2e-07 31.1 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.10 AJA93197.1 - 3.6e-07 29.7 0.0 7.7e-07 28.6 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_3 PF01596.12 AJA93197.1 - 6.5e-07 28.6 0.1 7.9e-07 28.3 0.1 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_23 PF13489.1 AJA93197.1 - 1.5e-06 28.0 0.0 1.7e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.1 AJA93197.1 - 7.7e-06 26.6 0.0 1.2e-05 26.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 AJA93197.1 - 2.2e-05 24.0 0.2 4.2e-05 23.1 0.1 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase GCD14 PF08704.5 AJA93197.1 - 0.00013 21.5 0.0 0.00016 21.2 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit FtsJ PF01728.14 AJA93197.1 - 0.00017 21.6 0.1 0.00073 19.5 0.0 1.9 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_32 PF13679.1 AJA93197.1 - 0.00019 21.1 0.1 0.00053 19.6 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain FmrO PF07091.6 AJA93197.1 - 0.00038 19.5 0.0 0.0005 19.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Spermine_synth PF01564.12 AJA93197.1 - 0.00077 18.4 0.0 0.0012 17.8 0.0 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase Met_10 PF02475.11 AJA93197.1 - 0.00088 18.9 0.0 0.001 18.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein GidB PF02527.10 AJA93197.1 - 0.0011 18.1 0.1 0.0014 17.7 0.1 1.3 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G N6_N4_Mtase PF01555.13 AJA93197.1 - 0.0012 18.4 0.2 0.0021 17.5 0.0 1.5 2 0 0 2 2 2 1 DNA methylase RrnaAD PF00398.15 AJA93197.1 - 0.0013 17.8 0.0 0.0018 17.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_5 PF01795.14 AJA93197.1 - 0.0014 17.9 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 MraW methylase family DOT1 PF08123.8 AJA93197.1 - 0.002 17.4 0.2 0.0034 16.7 0.2 1.6 1 1 0 1 1 1 1 Histone methylation protein DOT1 AviRa PF11599.3 AJA93197.1 - 0.0029 16.6 0.0 0.004 16.2 0.0 1.2 1 0 0 1 1 1 1 RRNA methyltransferase AviRa Methyltransf_16 PF10294.4 AJA93197.1 - 0.011 15.1 0.2 0.019 14.4 0.1 1.4 1 0 0 1 1 1 0 Putative methyltransferase NodS PF05401.6 AJA93197.1 - 0.013 14.8 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_9 PF08003.6 AJA93197.1 - 0.02 13.5 0.0 0.034 12.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1698) TRM PF02005.11 AJA93197.1 - 0.034 13.0 0.0 0.042 12.7 0.0 1.1 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase N6_Mtase PF02384.11 AJA93197.1 - 0.061 12.3 0.0 0.081 11.9 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase Nol1_Nop2_Fmu PF01189.12 AJA93197.1 - 0.062 12.6 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 NOL1/NOP2/sun family tRNA_U5-meth_tr PF05958.6 AJA93197.1 - 0.11 11.2 0.0 0.15 10.7 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase EIF_2_alpha PF07541.7 AJA93198.1 - 1.3e-20 73.1 3.0 2.3e-20 72.3 0.2 2.4 1 1 1 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 AJA93198.1 - 3.1e-14 52.8 0.4 7e-14 51.6 0.3 1.7 1 0 0 1 1 1 1 S1 RNA binding domain EXOSC1 PF10447.4 AJA93198.1 - 0.045 13.7 0.1 0.23 11.4 0.0 2.1 2 1 0 2 2 2 0 Exosome component EXOSC1/CSL4 COG5 PF10392.4 AJA93198.1 - 0.41 10.6 4.8 0.2 11.5 0.8 2.1 2 1 0 2 2 2 0 Golgi transport complex subunit 5 PEPCK_ATP PF01293.15 AJA93200.1 - 2.7e-220 731.7 0.0 3.2e-220 731.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_18 PF13238.1 AJA93200.1 - 3.1 8.1 6.2 13 6.0 0.1 2.8 3 1 0 3 3 3 0 AAA domain Glycos_transf_1 PF00534.15 AJA93201.1 - 1.1e-38 132.3 0.0 2.6e-38 131.1 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 AJA93201.1 - 4.1e-13 49.6 0.0 7.2e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 AJA93201.1 - 5.5e-08 32.9 0.0 1.8e-07 31.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 AJA93201.1 - 3.3e-07 30.1 0.0 7.8e-07 28.9 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 AJA93201.1 - 1.2e-06 28.4 3.0 1.8e-06 27.8 0.7 2.3 2 1 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 AJA93201.1 - 0.00018 21.6 0.0 0.00026 21.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain DUF2358 PF10184.4 AJA93201.1 - 0.37 10.7 5.3 1 9.3 0.1 3.1 2 1 2 4 4 4 0 Uncharacterized conserved protein (DUF2358) eIF-5_eIF-2B PF01873.12 AJA93202.1 - 8.1e-29 99.8 0.0 9.8e-29 99.5 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.1 AJA93202.1 - 0.0085 16.3 0.5 0.013 15.7 0.4 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.7 AJA93202.1 - 0.013 14.8 1.2 0.024 13.9 0.9 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding Elf1 PF05129.8 AJA93202.1 - 0.013 15.1 0.6 0.022 14.4 0.4 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF2387 PF09526.5 AJA93202.1 - 0.053 13.4 0.8 0.094 12.6 0.5 1.3 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zf-TFIIB PF13453.1 AJA93202.1 - 0.15 11.3 2.0 0.29 10.3 1.4 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-ISL3 PF14690.1 AJA93202.1 - 0.27 11.2 1.5 3.6 7.7 0.1 2.7 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn-ribbon_8 PF09723.5 AJA93202.1 - 0.41 10.6 3.0 3.1 7.8 0.3 2.2 1 1 1 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.1 AJA93202.1 - 0.44 10.2 3.3 25 4.6 0.1 3.4 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 AJA93202.1 - 0.5 9.9 3.6 23 4.6 0.1 3.4 4 0 0 4 4 4 0 zinc-ribbon domain DUF1512 PF07431.7 AJA93203.1 - 1.4e-91 306.9 1.3 1.6e-91 306.7 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) APC2 PF08672.6 AJA93203.1 - 0.081 13.1 0.3 0.26 11.5 0.2 1.9 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 TPR_11 PF13414.1 AJA93204.1 - 2.6e-19 68.6 0.1 9.5e-10 37.9 0.0 2.4 2 0 0 2 2 2 2 TPR repeat TPR_2 PF07719.12 AJA93204.1 - 3.2e-19 67.2 0.0 3.1e-05 23.5 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.23 AJA93204.1 - 6.2e-16 57.2 0.7 0.0038 16.7 0.1 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_16 PF13432.1 AJA93204.1 - 8.7e-13 48.5 0.0 7.1e-06 26.5 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 AJA93204.1 - 4.7e-12 45.1 0.6 0.00076 19.4 0.0 3.8 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.1 AJA93204.1 - 2.2e-11 43.9 0.1 2.3e-05 24.6 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.1 AJA93204.1 - 1.6e-09 37.5 0.0 0.00059 19.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 AJA93204.1 - 2.2e-09 36.4 1.9 0.0005 19.6 0.1 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.1 AJA93204.1 - 8.1e-08 32.2 0.0 0.076 13.6 0.0 4.1 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.1 AJA93204.1 - 1.6e-06 28.2 0.6 0.021 15.2 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_9 PF13371.1 AJA93204.1 - 1.2e-05 25.0 0.0 0.0062 16.3 0.0 2.6 2 1 2 4 4 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 AJA93204.1 - 0.0013 18.5 0.0 0.28 11.0 0.0 3.2 1 1 2 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat Apc3 PF12895.2 AJA93204.1 - 0.0088 16.1 0.1 0.016 15.3 0.1 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_20 PF14561.1 AJA93204.1 - 0.0097 16.0 0.3 1.8 8.7 0.0 3.3 2 1 0 3 3 3 1 Tetratricopeptide repeat YfiO PF13525.1 AJA93204.1 - 0.022 14.2 0.5 0.34 10.3 0.0 2.4 2 1 1 3 3 3 0 Outer membrane lipoprotein TPR_7 PF13176.1 AJA93204.1 - 0.038 13.7 0.3 46 4.1 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat PcrB PF01884.12 AJA93205.1 - 9.1e-67 224.6 0.2 1.1e-66 224.3 0.1 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 AJA93205.1 - 5.4e-09 35.6 0.1 3.2e-07 29.8 0.0 2.1 2 0 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.20 AJA93205.1 - 4.7e-05 22.4 0.3 0.00015 20.8 0.2 1.7 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Trp_syntA PF00290.15 AJA93205.1 - 0.00045 18.8 0.2 0.0034 15.9 0.1 2.0 2 0 0 2 2 2 1 Tryptophan synthase alpha chain IGPS PF00218.16 AJA93205.1 - 0.0013 17.8 0.3 0.021 13.8 0.0 2.5 3 0 0 3 3 3 1 Indole-3-glycerol phosphate synthase Dus PF01207.12 AJA93205.1 - 0.0041 16.0 0.1 0.71 8.6 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.9 AJA93205.1 - 0.0059 15.7 1.4 0.19 10.7 0.1 2.2 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.12 AJA93205.1 - 0.014 14.5 0.1 0.16 11.0 0.0 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI NanE PF04131.9 AJA93205.1 - 0.022 13.7 1.9 1.1 8.1 0.0 2.7 2 1 1 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.14 AJA93205.1 - 0.063 12.3 0.1 0.13 11.3 0.1 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family NMO PF03060.10 AJA93205.1 - 0.11 11.6 3.5 0.43 9.6 0.2 2.1 2 0 0 2 2 2 0 Nitronate monooxygenase COX7C PF02935.11 AJA93206.1 - 0.079 12.7 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc PMP1_2 PF08114.6 AJA93207.1 - 2.2 7.8 6.6 0.53 9.8 0.6 2.2 1 1 1 2 2 2 0 ATPase proteolipid family PepSY PF03413.14 AJA93208.1 - 1.7e-06 28.5 0.1 3.6e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain DUF3106 PF11304.3 AJA93208.1 - 0.0057 17.0 13.1 0.013 15.8 9.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3106) DUF3806 PF12713.2 AJA93208.1 - 0.12 11.8 0.7 4.8 6.7 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3806) Spc7 PF08317.6 AJA93209.1 - 0.00014 20.6 25.5 0.013 14.1 8.5 2.5 2 1 0 2 2 2 2 Spc7 kinetochore protein Mod_r PF07200.8 AJA93209.1 - 0.0083 16.0 14.4 0.25 11.2 5.3 2.6 2 0 0 2 2 2 2 Modifier of rudimentary (Mod(r)) protein IncA PF04156.9 AJA93209.1 - 0.021 14.4 13.8 0.38 10.3 3.4 3.2 3 0 0 3 3 3 0 IncA protein STAT_alpha PF01017.15 AJA93209.1 - 0.03 14.0 11.6 0.4 10.3 2.0 2.6 2 1 0 2 2 2 0 STAT protein, all-alpha domain ADIP PF11559.3 AJA93209.1 - 0.063 13.1 14.8 0.96 9.3 5.0 2.6 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding KSR1-SAM PF13543.1 AJA93209.1 - 0.09 12.5 5.3 5 6.9 0.1 2.7 2 0 0 2 2 2 0 SAM like domain present in kinase suppressor RAS 1 DUF1664 PF07889.7 AJA93209.1 - 0.1 12.3 21.9 0.38 10.5 2.1 4.5 2 1 1 4 4 4 0 Protein of unknown function (DUF1664) SLX9 PF15341.1 AJA93209.1 - 0.12 12.8 8.8 2.3 8.6 0.8 2.5 2 0 0 2 2 2 0 Ribosome biogenesis protein SLX9 APG6 PF04111.7 AJA93209.1 - 0.15 11.0 15.2 0.91 8.5 5.9 2.2 2 0 0 2 2 2 0 Autophagy protein Apg6 DUF641 PF04859.7 AJA93209.1 - 0.18 11.5 10.7 0.077 12.7 1.4 3.2 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) Bacillus_HBL PF05791.6 AJA93209.1 - 0.33 10.2 14.4 0.3 10.4 4.7 3.2 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) NEP PF10167.4 AJA93209.1 - 1.4 8.6 10.1 0.12 12.1 0.4 3.5 2 2 1 3 3 3 0 Uncharacterised conserved protein Syntaxin-6_N PF09177.6 AJA93209.1 - 3.7 8.0 22.0 0.45 10.9 1.0 4.7 3 2 2 5 5 4 0 Syntaxin 6, N-terminal DivIC PF04977.10 AJA93209.1 - 5.5 6.5 6.8 2.4 7.6 1.5 3.0 2 0 0 2 2 2 0 Septum formation initiator Reo_sigmaC PF04582.7 AJA93209.1 - 6.1 5.9 15.7 0.25 10.4 1.7 2.9 1 1 2 3 3 3 0 Reovirus sigma C capsid protein GATase_2 PF00310.16 AJA93212.1 - 1.7e-19 69.7 0.0 4.2e-13 48.7 0.0 3.2 2 1 0 2 2 2 2 Glutamine amidotransferases class-II GATase_6 PF13522.1 AJA93212.1 - 1.7e-15 57.1 0.0 4.6e-15 55.7 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.1 AJA93212.1 - 9e-13 48.0 0.0 1.8e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.22 AJA93212.1 - 3.6e-10 39.6 0.0 7.5e-10 38.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 AJA93212.1 - 0.00026 19.7 0.0 0.00046 18.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PRTase_3 PF15610.1 AJA93212.1 - 0.037 12.9 0.0 0.06 12.2 0.0 1.2 1 0 0 1 1 1 0 PRTase ComF-like Ribosomal_L40e PF01020.12 AJA93213.1 - 1.6e-05 24.3 4.2 2.3e-05 23.9 2.8 1.4 1 1 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 AJA93213.1 - 0.00084 19.1 0.8 0.00094 18.9 0.6 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-AD PF07776.10 AJA93213.1 - 0.0033 17.4 1.2 0.0035 17.2 0.8 1.1 1 0 0 1 1 1 1 Zinc-finger associated domain (zf-AD) zf-C3HC4_3 PF13920.1 AJA93213.1 - 0.0071 16.0 2.6 0.0082 15.7 1.8 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FYVE_2 PF02318.11 AJA93213.1 - 0.011 15.6 0.8 0.011 15.6 0.5 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger HypA PF01155.14 AJA93213.1 - 0.055 13.1 0.5 0.06 13.0 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_2 PF13240.1 AJA93213.1 - 0.066 12.7 0.1 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Coronavirus_5 PF05528.6 AJA93213.1 - 0.083 12.7 0.2 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 Coronavirus gene 5 protein CTV_P23 PF04808.7 AJA93213.1 - 0.1 11.8 0.5 0.11 11.8 0.4 1.0 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein zf-ribbon_3 PF13248.1 AJA93213.1 - 0.11 11.7 0.1 0.16 11.2 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 AJA93213.1 - 0.2 11.1 3.2 0.37 10.3 2.2 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Methyltransf_13 PF08421.6 AJA93213.1 - 0.21 11.1 1.2 6.3 6.3 0.1 2.1 1 1 1 2 2 2 0 Putative zinc binding domain zf-trcl PF13451.1 AJA93213.1 - 4.9 6.8 8.9 0.76 9.4 2.4 2.0 1 1 1 2 2 2 0 Probable zinc-binding domain Phos_pyr_kin PF08543.7 AJA93214.1 - 4e-73 245.6 4.1 6.4e-73 244.9 2.9 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Aldolase_2 PF10120.4 AJA93214.1 - 2.5e-52 176.6 0.2 4.2e-52 175.9 0.1 1.4 1 0 0 1 1 1 1 Putative aldolase PfkB PF00294.19 AJA93214.1 - 1.3e-07 31.0 0.0 2.3e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.12 AJA93214.1 - 4e-06 26.2 0.4 7.9e-06 25.3 0.2 1.5 1 0 0 1 1 1 1 Carbohydrate kinase GerE PF00196.14 AJA93214.1 - 0.058 12.7 0.8 0.19 11.0 0.2 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Methyltransf_32 PF13679.1 AJA93214.1 - 0.077 12.6 0.1 0.23 11.1 0.1 1.8 1 0 0 1 1 1 0 Methyltransferase domain CCDC32 PF14989.1 AJA93215.1 - 0.041 13.7 0.4 0.093 12.5 0.2 1.9 1 1 0 1 1 1 0 Coiled-coil domain containing 32 ABC2_membrane_4 PF12730.2 AJA93216.1 - 0.0033 16.6 2.2 0.0037 16.4 1.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 AJA93216.1 - 0.049 12.9 5.3 0.05 12.8 3.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF973 PF06157.6 AJA93216.1 - 0.063 12.2 5.9 0.077 11.9 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF2975 PF11188.3 AJA93216.1 - 0.11 12.2 0.2 0.12 12.0 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) RDD PF06271.7 AJA93216.1 - 0.13 12.1 2.4 0.15 11.9 1.7 1.1 1 0 0 1 1 1 0 RDD family DUF4097 PF13349.1 AJA93216.1 - 0.15 11.5 7.9 0.85 9.1 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4097) DUF3185 PF11381.3 AJA93216.1 - 0.3 10.8 8.8 1.8 8.3 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) DUF2371 PF10177.4 AJA93216.1 - 0.7 9.7 2.8 0.83 9.5 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) Tetraspannin PF00335.15 AJA93216.1 - 0.77 8.9 5.4 0.91 8.7 3.7 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF4064 PF13273.1 AJA93216.1 - 1.2 9.2 8.1 2.8 8.1 5.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF872 PF05915.7 AJA93216.1 - 1.6 8.6 4.4 1.8 8.4 0.1 2.0 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF2929 PF11151.3 AJA93216.1 - 2.4 8.3 7.9 3.1 7.9 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2929) Neurensin PF14927.1 AJA93216.1 - 2.9 7.2 4.7 0.69 9.2 0.3 1.8 1 1 0 2 2 2 0 Neurensin DUF3149 PF11346.3 AJA93216.1 - 3.1 7.4 12.4 0.45 10.1 2.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) YqgF PF14639.1 AJA93217.1 - 0.019 14.5 2.4 0.43 10.1 0.4 2.2 1 1 1 2 2 2 0 Holliday-junction resolvase-like of SPT6 DUF4400 PF14348.1 AJA93217.1 - 0.092 12.1 0.1 0.14 11.4 0.1 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4400) DUF919 PF06034.6 AJA93217.1 - 0.094 12.3 2.7 0.16 11.5 0.4 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) SNF2_N PF00176.18 AJA93217.1 - 0.12 11.1 2.7 0.15 10.8 1.9 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain Glutaredoxin2_C PF04399.8 AJA93217.1 - 0.14 11.7 1.8 0.25 10.9 0.5 1.8 1 1 0 1 1 1 0 Glutaredoxin 2, C terminal domain TACC PF05010.9 AJA93217.1 - 0.52 10.0 9.1 0.81 9.4 6.3 1.3 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC) DUF837 PF05769.6 AJA93217.1 - 0.65 9.5 8.5 0.12 11.9 0.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF837) YgaB PF14182.1 AJA93217.1 - 0.66 10.2 6.7 2.3 8.5 1.6 2.7 1 1 2 3 3 3 0 YgaB-like protein DUF2203 PF09969.4 AJA93217.1 - 0.88 9.7 4.2 13 6.0 2.9 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Fib_alpha PF08702.5 AJA93217.1 - 1.3 9.1 8.5 1.8 8.7 5.9 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Cauli_DNA-bind PF03310.8 AJA93217.1 - 1.3 8.8 5.0 0.83 9.5 0.7 2.1 1 1 1 2 2 2 0 Caulimovirus DNA-binding protein DUF4252 PF14060.1 AJA93217.1 - 1.8 8.1 9.8 4.2 6.9 6.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4252) NUDIX PF00293.23 AJA93218.1 - 1e-16 60.8 0.0 1.3e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain UbiA PF01040.13 AJA93219.1 - 1.6e-22 79.9 20.3 2.2e-22 79.5 14.0 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family YtpI PF14007.1 AJA93219.1 - 0.039 13.8 4.2 2.1 8.3 0.2 3.1 3 0 0 3 3 3 0 YtpI-like protein ATP1G1_PLM_MAT8 PF02038.11 AJA93219.1 - 0.18 10.8 1.9 12 5.0 0.2 2.8 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family MIP PF00230.15 AJA93220.1 - 7.3e-51 172.8 17.7 8.6e-51 172.5 12.3 1.0 1 0 0 1 1 1 1 Major intrinsic protein FtsX PF02687.16 AJA93221.1 - 3.3e-22 78.5 5.1 3.3e-22 78.5 3.5 1.9 2 0 0 2 2 2 1 FtsX-like permease family MacB_PCD PF12704.2 AJA93221.1 - 1.1e-20 74.3 0.8 2e-20 73.3 0.6 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain DUF3874 PF12990.2 AJA93221.1 - 0.11 12.6 0.0 0.57 10.3 0.0 2.1 2 0 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) AdoHcyase PF05221.12 AJA93222.1 - 4.9e-58 196.2 0.4 5.7e-58 195.9 0.3 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 AJA93222.1 - 9.1e-51 171.9 0.3 9.1e-51 171.9 0.2 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 AJA93222.1 - 9.6e-08 31.3 0.1 2.9e-07 29.8 0.1 1.9 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 AJA93222.1 - 7e-06 25.5 0.0 1.2e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 AJA93222.1 - 0.00061 19.7 0.1 0.0023 17.9 0.0 2.0 2 0 0 2 2 2 1 TrkA-N domain 3HCDH_N PF02737.13 AJA93222.1 - 0.11 12.1 0.8 0.33 10.6 0.6 1.8 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.9 AJA93222.1 - 0.18 11.6 1.7 0.49 10.2 1.0 1.9 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.16 AJA93222.1 - 0.56 9.7 2.9 5.1 6.6 0.1 2.8 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain PvlArgDC PF01862.11 AJA93224.1 - 7e-60 201.3 0.0 7.8e-60 201.2 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) GSDH PF07995.6 AJA93225.1 - 3.3e-77 259.7 0.0 4.1e-77 259.4 0.0 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Reg_prop PF07494.6 AJA93225.1 - 0.012 15.5 0.1 8.1 6.8 0.0 3.1 2 0 0 2 2 2 0 Two component regulator propeller PQQ_3 PF13570.1 AJA93225.1 - 0.046 14.0 1.1 48 4.4 0.0 4.1 3 1 0 4 4 4 0 PQQ-like domain NHL PF01436.16 AJA93225.1 - 0.097 12.6 0.0 5.6 7.1 0.0 3.4 4 0 0 4 4 4 0 NHL repeat Med30 PF11315.3 AJA93226.1 - 0.0054 16.8 0.3 0.006 16.7 0.2 1.1 1 0 0 1 1 1 1 Mediator complex subunit 30 ALIX_LYPXL_bnd PF13949.1 AJA93226.1 - 0.012 14.5 1.8 0.014 14.3 1.2 1.0 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV CDC37_N PF03234.9 AJA93226.1 - 0.013 15.8 3.5 0.013 15.7 2.4 1.1 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding LuxE PF04443.7 AJA93226.1 - 0.018 13.7 0.6 0.019 13.6 0.4 1.1 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE TelA PF05816.6 AJA93226.1 - 0.033 12.8 1.8 0.037 12.7 1.2 1.0 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) MSA-2c PF12238.3 AJA93226.1 - 0.077 12.6 0.6 0.082 12.5 0.4 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF727 PF05303.7 AJA93226.1 - 0.08 12.7 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF727) CorA PF01544.13 AJA93226.1 - 0.096 11.7 1.4 0.1 11.5 0.9 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF342 PF03961.8 AJA93226.1 - 0.11 10.8 3.6 0.11 10.8 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) TFIIA_gamma_N PF02268.11 AJA93226.1 - 0.11 12.0 1.4 0.83 9.2 0.1 2.4 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain DUF1043 PF06295.7 AJA93226.1 - 0.13 11.8 2.1 0.14 11.8 1.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) SlyX PF04102.7 AJA93226.1 - 0.2 12.0 2.0 2.3 8.6 0.1 2.1 1 1 1 2 2 2 0 SlyX Latarcin PF10279.4 AJA93226.1 - 0.36 11.0 2.5 0.64 10.2 1.7 1.4 1 1 0 1 1 1 0 Latarcin precursor DUF2951 PF11166.3 AJA93226.1 - 0.47 10.3 4.4 0.57 10.0 2.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) VASP_tetra PF08776.6 AJA93226.1 - 0.5 9.7 7.8 2.2 7.6 0.1 3.2 3 0 0 3 3 3 0 VASP tetramerisation domain Plasmodium_Vir PF05795.6 AJA93229.1 - 0.11 11.6 0.1 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Spore_coat_CotO PF14153.1 AJA93229.1 - 1.5 8.2 6.9 2.1 7.7 4.8 1.2 1 0 0 1 1 1 0 Spore coat protein CotO RE_TdeIII PF09520.5 AJA93229.1 - 3.1 7.0 7.2 7.8 5.7 5.0 1.6 1 1 0 1 1 1 0 Type II restriction endonuclease, TdeIII ABC_tran PF00005.22 AJA93231.1 - 2.2e-29 102.5 0.0 5e-29 101.3 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 AJA93231.1 - 7.2e-13 49.1 2.0 4.7e-07 30.0 0.0 2.9 1 1 2 3 3 3 2 AAA domain AAA_15 PF13175.1 AJA93231.1 - 2.6e-09 36.6 2.9 2e-07 30.3 0.0 3.1 2 1 1 3 3 3 1 AAA ATPase domain AAA_23 PF13476.1 AJA93231.1 - 2.8e-05 24.5 0.3 8.7e-05 22.9 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 AJA93231.1 - 0.00011 21.6 0.3 0.00021 20.7 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 AJA93231.1 - 0.0074 16.4 1.0 0.052 13.6 0.4 2.4 2 1 0 2 2 2 1 AAA domain ArgK PF03308.11 AJA93231.1 - 0.012 14.3 0.1 0.023 13.5 0.1 1.3 1 0 0 1 1 1 0 ArgK protein SbcCD_C PF13558.1 AJA93231.1 - 0.012 15.4 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATP_bind_1 PF03029.12 AJA93231.1 - 0.017 14.6 0.0 0.035 13.6 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.16 AJA93231.1 - 0.026 13.6 0.1 0.056 12.6 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI FlgI PF02119.11 AJA93231.1 - 0.04 12.5 0.2 0.064 11.8 0.1 1.3 1 0 0 1 1 1 0 Flagellar P-ring protein SMC_N PF02463.14 AJA93231.1 - 0.05 12.8 2.2 1.8 7.7 0.0 2.8 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 AJA93231.1 - 0.054 12.6 0.1 0.094 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_10 PF12846.2 AJA93231.1 - 0.056 12.8 2.8 2.3 7.5 0.2 2.3 1 1 1 2 2 2 0 AAA-like domain AAA_17 PF13207.1 AJA93231.1 - 0.078 13.7 0.2 0.18 12.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 AJA93231.1 - 0.12 11.7 0.0 0.3 10.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain DnaJ PF00226.26 AJA93232.1 - 2.6e-10 39.8 0.0 4.8e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain HTH_45 PF14947.1 AJA93233.1 - 2.6e-17 62.3 0.2 3e-17 62.2 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_N PF14338.1 AJA93233.1 - 9.3e-05 22.4 0.0 0.0001 22.2 0.0 1.1 1 0 0 1 1 1 1 Mrr N-terminal domain Rrf2 PF02082.15 AJA93233.1 - 0.00024 21.1 0.1 0.00034 20.6 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator RNA_pol_Rpc34 PF05158.7 AJA93233.1 - 0.0011 18.2 0.1 0.0014 17.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit HTH_34 PF13601.1 AJA93233.1 - 0.0079 16.2 0.2 0.011 15.8 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain RPA_C PF08784.6 AJA93233.1 - 0.01 16.2 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal Ribosomal_S19e PF01090.14 AJA93233.1 - 0.025 14.0 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S19e DUF4364 PF14277.1 AJA93233.1 - 0.026 14.1 0.2 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) PadR PF03551.9 AJA93233.1 - 0.048 13.4 0.1 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TrmB PF01978.14 AJA93233.1 - 0.082 12.6 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Ferritin PF00210.19 AJA93234.1 - 4.4e-17 62.1 0.0 6.1e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 AJA93234.1 - 0.01 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Rubrerythrin FAA_hydrolase PF01557.13 AJA93235.1 - 1.9e-67 226.9 0.0 2.4e-67 226.5 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.4 AJA93235.1 - 0.12 12.7 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF2437) SAS4 PF15460.1 AJA93236.1 - 0.03 14.1 0.0 0.095 12.5 0.0 1.7 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 JmjN PF02375.12 AJA93236.1 - 0.71 9.4 2.6 22 4.6 0.3 2.5 2 0 0 2 2 2 0 jmjN domain HYR PF02494.11 AJA93237.1 - 1.5e-60 201.1 68.9 1.1e-06 28.5 1.2 12.6 12 0 0 12 12 12 11 HYR domain Big_3_4 PF13754.1 AJA93237.1 - 3.6e-35 120.0 128.9 0.00024 21.3 3.5 12.7 12 0 0 12 12 12 12 Bacterial Ig-like domain (group 3) NHL PF01436.16 AJA93237.1 - 3.4e-33 111.9 4.9 5.3e-06 26.1 0.0 6.8 6 0 0 6 6 6 6 NHL repeat REJ PF02010.10 AJA93237.1 - 1e-07 30.6 28.8 0.18 10.0 0.1 8.1 7 2 2 9 9 9 6 REJ domain SGL PF08450.7 AJA93237.1 - 1.1e-07 31.5 0.3 0.021 14.2 0.0 4.3 2 2 1 4 4 4 2 SMP-30/Gluconolaconase/LRE-like region Big_3_2 PF12245.3 AJA93237.1 - 0.0065 16.0 24.7 16 5.1 0.0 10.2 12 0 0 12 12 12 1 Bacterial Ig-like domain (group 3) HemolysinCabind PF00353.14 AJA93237.1 - 0.0072 16.6 40.9 0.053 13.9 2.9 6.4 6 0 0 6 6 6 3 Hemolysin-type calcium-binding repeat (2 copies) Peripla_BP_2 PF01497.13 AJA93238.1 - 2.8e-61 206.6 0.0 3.2e-61 206.4 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Fis1_TPR_N PF14852.1 AJA93238.1 - 0.05 12.9 0.0 1.4 8.2 0.0 2.5 2 0 0 2 2 2 0 Fis1 N-terminal tetratricopeptide repeat Syntaxin-6_N PF09177.6 AJA93238.1 - 0.098 13.0 0.5 0.26 11.7 0.1 2.0 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Syntaxin PF00804.20 AJA93238.1 - 0.24 11.5 1.8 8.3 6.6 1.4 2.4 1 1 1 2 2 2 0 Syntaxin eIF-1a PF01176.14 AJA93239.1 - 5.1e-21 73.8 1.6 6.5e-21 73.5 1.1 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 QueC PF06508.8 AJA93240.1 - 4.3e-51 173.1 0.2 4.9e-51 172.9 0.1 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 AJA93240.1 - 6.2e-05 22.6 0.0 9.5e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.9 AJA93240.1 - 0.0006 19.3 0.1 0.001 18.5 0.0 1.5 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) Arginosuc_synth PF00764.14 AJA93240.1 - 0.001 18.2 0.1 0.0013 17.8 0.0 1.1 1 0 0 1 1 1 1 Arginosuccinate synthase NAD_synthase PF02540.12 AJA93240.1 - 0.014 14.2 0.0 0.018 13.9 0.0 1.2 1 0 0 1 1 1 0 NAD synthase ATP_bind_3 PF01171.15 AJA93240.1 - 0.052 13.0 0.0 0.095 12.1 0.0 1.4 1 0 0 1 1 1 0 PP-loop family tRNA_Me_trans PF03054.11 AJA93240.1 - 0.058 11.9 0.0 0.083 11.4 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase DUF1737 PF08410.5 AJA93240.1 - 0.1 12.4 0.6 2.7 7.8 0.1 3.2 3 1 1 4 4 4 0 Domain of unknown function (DUF1737) PAC2 PF09754.4 AJA93241.1 - 9e-24 84.5 0.0 1.1e-23 84.2 0.0 1.0 1 0 0 1 1 1 1 PAC2 family tRNA-synt_1b PF00579.20 AJA93242.1 - 1.1e-41 142.8 0.0 1.5e-41 142.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Complex1_49kDa PF00346.14 AJA93243.1 - 9.3e-57 192.0 0.0 8.1e-46 156.2 0.0 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF3195 PF11424.3 AJA93243.1 - 0.0033 17.5 0.5 0.063 13.4 0.1 2.6 3 0 0 3 3 3 1 Protein of unknown function (DUF3195) DNA_pol_alpha_N PF12254.3 AJA93243.1 - 0.5 10.2 2.9 1.2 8.9 0.2 2.3 2 0 0 2 2 2 0 DNA polymerase alpha subunit p180 N terminal BPD_transp_1 PF00528.17 AJA93244.1 - 3.1e-23 82.2 15.5 3.1e-23 82.2 10.7 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component bact-PGI_C PF10432.4 AJA93245.1 - 1.7e-33 115.5 0.0 3.3e-33 114.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal region SIS PF01380.17 AJA93245.1 - 5.7e-07 29.2 0.1 1.1e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 SIS domain Pox_D2 PF04701.8 AJA93245.1 - 0.015 15.3 0.1 0.033 14.1 0.1 1.6 1 0 0 1 1 1 0 Pox virus D2 protein DNA_primase_S PF01896.14 AJA93245.1 - 0.041 13.6 1.0 0.063 13.0 0.7 1.7 1 1 0 1 1 1 0 Eukaryotic and archaeal DNA primase small subunit BRCA2 PF00634.13 AJA93246.1 - 0.084 12.1 0.1 0.17 11.2 0.1 1.5 1 0 0 1 1 1 0 BRCA2 repeat GSDH PF07995.6 AJA93247.1 - 3.4e-87 292.6 0.1 4.1e-87 292.3 0.0 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Tachylectin PF14517.1 AJA93247.1 - 0.095 12.0 0.0 61 2.8 0.0 3.1 3 0 0 3 3 3 0 Tachylectin TPPK_C PF12555.3 AJA93247.1 - 1.6 8.5 4.1 9.6 6.0 0.1 2.3 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal S-AdoMet_synt_C PF02773.11 AJA93248.1 - 4.7e-73 243.3 0.1 7.5e-73 242.7 0.0 1.3 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.11 AJA93248.1 - 1.1e-49 167.3 0.0 3.5e-49 165.7 0.0 1.9 3 0 0 3 3 3 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.15 AJA93248.1 - 2.3e-41 140.0 0.6 5.7e-41 138.8 0.1 1.9 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain tRNA-synt_1c PF00749.16 AJA93249.1 - 3.8e-74 249.1 0.0 5.6e-74 248.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 AJA93249.1 - 7.2e-27 94.1 0.8 6.6e-26 91.0 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain UPF0547 PF10571.4 AJA93250.1 - 0.076 12.7 1.3 0.13 11.9 0.9 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Gin PF10764.4 AJA93250.1 - 0.1 12.3 0.2 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin Glyco_hydro_85 PF03644.8 AJA93251.1 - 0.077 12.1 0.4 1.1 8.2 0.0 2.0 2 0 0 2 2 2 0 Glycosyl hydrolase family 85 PALP PF00291.20 AJA93252.1 - 6.8e-44 150.3 1.2 8.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF1610 PF07754.6 AJA93253.1 - 9e-07 28.8 17.4 0.0022 18.0 2.5 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) PolC_DP2 PF03833.8 AJA93253.1 - 0.038 11.6 3.8 0.039 11.6 2.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 C1_3 PF07649.7 AJA93253.1 - 0.072 13.1 10.0 0.38 10.8 0.8 2.7 2 1 0 2 2 2 0 C1-like domain zf-B_box PF00643.19 AJA93253.1 - 0.11 12.3 9.7 0.48 10.3 0.8 2.8 2 1 0 2 2 2 0 B-box zinc finger zf-RING_3 PF14369.1 AJA93253.1 - 0.14 12.1 1.0 0.14 12.1 0.7 2.4 1 1 0 2 2 2 0 zinc-finger zf-CHY PF05495.7 AJA93253.1 - 0.36 11.0 4.9 0.89 9.7 3.5 1.5 1 1 0 1 1 1 0 CHY zinc finger IBR PF01485.16 AJA93253.1 - 0.43 10.4 7.7 0.87 9.5 3.4 2.0 1 1 1 2 2 2 0 IBR domain Tnp_zf-ribbon_2 PF13842.1 AJA93253.1 - 0.8 10.1 10.3 0.67 10.4 2.7 2.5 1 1 1 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Rpr2 PF04032.11 AJA93253.1 - 1.1 9.2 8.5 5.1 7.0 5.9 1.8 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain NinF PF05810.7 AJA93253.1 - 2 8.2 4.6 0.57 10.0 0.5 1.9 1 1 1 2 2 2 0 NinF protein DUF2296 PF10058.4 AJA93253.1 - 3.8 7.3 14.9 8.1 6.2 0.1 3.6 1 1 2 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) zf-CXXC PF02008.15 AJA93253.1 - 3.9 7.3 9.3 0.7 9.7 0.9 2.3 2 1 0 2 2 2 0 CXXC zinc finger domain zf-HIT PF04438.11 AJA93253.1 - 5.9 6.6 15.4 0.25 11.0 2.9 2.8 2 1 0 2 2 2 0 HIT zinc finger Sgf11 PF08209.6 AJA93253.1 - 6.1 6.2 8.6 13 5.2 0.1 3.2 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) zf-MYND PF01753.13 AJA93253.1 - 6.5 6.7 8.4 5.4e+02 0.5 6.1 2.3 1 1 0 1 1 1 0 MYND finger Rep_fac-A_C PF08646.5 AJA93253.1 - 7.1 6.3 7.9 36 4.0 5.5 2.1 1 1 0 1 1 1 0 Replication factor-A C terminal domain zf-UBR PF02207.15 AJA93253.1 - 8 6.2 8.7 35 4.2 4.6 2.1 1 1 1 2 2 2 0 Putative zinc finger in N-recognin (UBR box) C1_4 PF07975.7 AJA93253.1 - 8.4 6.4 9.4 2e+02 2.0 6.5 2.6 1 1 0 1 1 1 0 TFIIH C1-like domain Ribosomal_L21e PF01157.13 AJA93254.1 - 2.7e-14 52.7 2.3 3.2e-14 52.5 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L21e AP_endonuc_2 PF01261.19 AJA93255.1 - 8.6e-33 113.4 0.0 1.8e-32 112.3 0.0 1.5 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel ASCH PF04266.9 AJA93256.1 - 2.8e-12 46.9 0.1 4.1e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 ASCH domain FeS PF04060.8 AJA93256.1 - 0.062 12.8 0.0 0.15 11.6 0.0 1.6 1 0 0 1 1 1 0 Putative Fe-S cluster Nitr_red_bet_C PF14711.1 AJA93256.1 - 0.071 12.6 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal TF_Zn_Ribbon PF08271.7 AJA93257.1 - 0.021 14.1 1.4 0.036 13.4 1.0 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.1 AJA93257.1 - 0.021 14.4 5.8 0.35 10.5 4.0 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Lar_restr_allev PF14354.1 AJA93257.1 - 0.029 14.6 3.3 0.3 11.4 2.3 2.1 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_5 PF13719.1 AJA93257.1 - 0.04 13.4 6.1 0.63 9.6 4.3 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zf-Mss51 PF13824.1 AJA93257.1 - 0.043 13.6 0.5 0.058 13.2 0.4 1.4 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Ribosomal_S27e PF01667.12 AJA93257.1 - 0.064 12.7 3.6 0.22 11.0 2.5 1.8 1 1 0 1 1 1 0 Ribosomal protein S27 zinc-ribbons_6 PF07191.7 AJA93257.1 - 0.073 12.8 0.4 0.095 12.5 0.3 1.2 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.1 AJA93257.1 - 0.074 12.5 1.7 3.7 7.1 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 AJA93257.1 - 0.098 12.3 0.3 0.11 12.1 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-C4_Topoisom PF01396.14 AJA93257.1 - 0.11 12.0 2.2 2.4 7.7 0.3 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DNA_RNApol_7kD PF03604.8 AJA93257.1 - 0.12 11.8 1.6 0.2 11.1 1.1 1.4 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit RIG-I_C-RD PF11648.3 AJA93257.1 - 0.14 12.0 1.9 1.9 8.3 0.0 2.1 1 1 1 2 2 2 0 C-terminal domain of RIG-I TFIIS_C PF01096.13 AJA93257.1 - 0.2 11.2 3.3 6.1 6.5 0.5 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Sgf11 PF08209.6 AJA93257.1 - 0.21 10.9 3.4 1.9 7.9 0.2 2.5 2 1 0 2 2 2 0 Sgf11 (transcriptional regulation protein) CpXC PF14353.1 AJA93257.1 - 0.28 11.1 1.8 0.81 9.6 0.4 1.8 1 1 1 2 2 2 0 CpXC protein DUF329 PF03884.9 AJA93257.1 - 0.4 10.2 2.4 0.55 9.8 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-ribbon_3 PF13248.1 AJA93257.1 - 0.63 9.3 4.8 2.4 7.4 3.3 1.9 1 1 0 1 1 1 0 zinc-ribbon domain DUF2387 PF09526.5 AJA93257.1 - 1.2 9.0 3.8 3.9 7.4 2.7 1.8 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) DUF3797 PF12677.2 AJA93257.1 - 3 7.5 7.0 3.3 7.3 0.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-C2HC_2 PF13913.1 AJA93257.1 - 4 7.2 7.2 14 5.5 0.3 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Zn-ribbon_8 PF09723.5 AJA93257.1 - 4.2 7.4 6.1 7.5 6.6 0.5 2.0 1 1 0 1 1 1 0 Zinc ribbon domain PhnA_Zn_Ribbon PF08274.7 AJA93257.1 - 7.7 6.3 7.2 1e+02 2.7 4.9 2.3 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-H2C2_5 PF13909.1 AJA93258.1 - 0.00047 20.2 0.3 0.0007 19.6 0.2 1.3 1 0 0 1 1 1 1 C2H2-type zinc-finger domain Tnp_zf-ribbon_2 PF13842.1 AJA93258.1 - 0.00088 19.6 1.0 0.0013 19.1 0.7 1.2 1 0 0 1 1 1 1 DDE_Tnp_1-like zinc-ribbon zf-C2H2_2 PF12756.2 AJA93258.1 - 0.015 15.3 0.5 0.016 15.2 0.3 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2 PF00096.21 AJA93258.1 - 0.024 14.9 0.9 0.035 14.4 0.4 1.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 AJA93258.1 - 0.039 14.2 0.6 0.062 13.6 0.4 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-BED PF02892.10 AJA93258.1 - 0.077 12.7 3.6 0.14 11.9 2.5 1.4 1 1 0 1 1 1 0 BED zinc finger DUF3505 PF12013.3 AJA93258.1 - 0.078 13.2 0.1 0.084 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3505) Thioredoxin_4 PF13462.1 AJA93259.1 - 1.1e-30 106.8 0.2 2.4e-30 105.7 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 AJA93259.1 - 3e-15 56.2 2.2 7.6e-14 51.7 1.5 2.1 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 AJA93259.1 - 5.7e-07 29.7 0.1 1.9e-06 28.0 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain FAD_oxidored PF12831.2 AJA93260.1 - 1.7e-17 63.6 0.1 3.8e-17 62.4 0.0 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.19 AJA93260.1 - 1.8e-14 53.4 1.3 6.2e-08 31.9 0.4 2.3 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 AJA93260.1 - 2.6e-14 53.0 0.4 7.2e-13 48.3 0.3 2.2 1 1 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.19 AJA93260.1 - 8e-14 51.3 2.1 2.1e-08 33.4 0.3 2.1 2 0 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.9 AJA93260.1 - 1.3e-10 40.4 0.9 0.00013 20.7 0.0 2.4 1 1 1 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.9 AJA93260.1 - 2.9e-09 35.8 1.9 3.9e-08 32.1 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.7 AJA93260.1 - 1.5e-08 34.0 0.1 3e-08 33.0 0.1 1.5 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.1 AJA93260.1 - 2.7e-08 34.1 0.1 4.1e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 AJA93260.1 - 2.1e-07 30.1 1.4 3.3e-07 29.5 0.2 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.9 AJA93260.1 - 2.6e-07 30.7 2.9 9e-07 28.9 1.8 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 AJA93260.1 - 1.3e-05 24.4 1.3 4.2e-05 22.7 0.1 2.0 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.22 AJA93260.1 - 2.2e-05 24.7 0.7 0.00057 20.2 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 AJA93260.1 - 2.7e-05 24.0 0.1 5.6e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.16 AJA93260.1 - 3.6e-05 23.3 0.2 8.1e-05 22.2 0.0 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain GMC_oxred_N PF00732.14 AJA93260.1 - 5.4e-05 22.4 0.4 0.0026 16.9 0.1 2.1 2 0 0 2 2 2 1 GMC oxidoreductase 3HCDH_N PF02737.13 AJA93260.1 - 0.00063 19.4 0.1 0.0011 18.6 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 AJA93260.1 - 0.0013 18.9 0.0 0.0037 17.5 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 AJA93260.1 - 0.0031 17.4 0.0 0.0069 16.3 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.11 AJA93260.1 - 0.096 12.1 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA XdhC_C PF13478.1 AJA93260.1 - 0.13 12.5 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 XdhC Rossmann domain DUF387 PF04079.11 AJA93261.1 - 8.1e-35 119.5 0.3 1e-34 119.2 0.2 1.1 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_20 PF12840.2 AJA93261.1 - 0.011 15.4 0.1 0.41 10.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Y_Y_Y PF07495.8 AJA93261.1 - 0.03 14.0 0.1 0.08 12.7 0.0 1.7 1 0 0 1 1 1 0 Y_Y_Y domain TrmB PF01978.14 AJA93261.1 - 0.045 13.4 0.2 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB TBPIP PF07106.8 AJA93261.1 - 0.051 13.1 0.2 3 7.3 0.0 2.2 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PadR PF03551.9 AJA93261.1 - 0.069 12.9 0.6 0.33 10.7 0.1 2.1 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family S_100 PF01023.14 AJA93261.1 - 0.085 12.1 0.1 0.24 10.7 0.1 1.8 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain Acetyltransf_3 PF13302.1 AJA93262.1 - 3.6e-21 75.8 0.1 4.3e-21 75.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 AJA93262.1 - 1.4e-15 57.5 2.2 1.6e-15 57.4 1.5 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 AJA93262.1 - 3.8e-10 39.6 0.1 5.3e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 AJA93262.1 - 1.9e-05 24.5 0.0 3e-05 23.9 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 AJA93262.1 - 5.2e-05 23.3 0.2 7.8e-05 22.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Pox_polyA_pol_N PF12630.2 AJA93262.1 - 0.065 13.3 1.6 0.12 12.4 1.1 1.4 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain MtN3_slv PF03083.11 AJA93263.1 - 7.6e-11 41.7 3.5 9e-11 41.4 2.4 1.0 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange PQ-loop PF04193.9 AJA93263.1 - 3.7e-06 26.3 0.4 3.7e-06 26.3 0.3 1.5 2 0 0 2 2 2 1 PQ loop repeat DUF4389 PF14333.1 AJA93263.1 - 0.37 10.5 2.1 4.1 7.1 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF1211 PF06736.6 AJA93263.1 - 0.49 10.5 3.0 8.4 6.6 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1211) DUF2583 PF10762.4 AJA93263.1 - 0.57 10.3 5.3 0.21 11.7 1.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) DUF3784 PF12650.2 AJA93263.1 - 1.1 9.1 5.9 6 6.8 4.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3784)