# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltrn_RNA_3 PF02598.17 gi|15678032|ref|NP_275146.1| - 7.3e-54 183.2 0.0 3.2e-53 181.1 0.0 1.8 1 1 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.19 gi|15678032|ref|NP_275146.1| - 0.025 14.7 0.0 5.1 7.3 0.0 2.2 2 0 0 2 2 2 0 SpoU rRNA Methylase family SPOUT_MTase_2 PF14419.6 gi|15678032|ref|NP_275146.1| - 0.084 12.2 0.1 0.79 9.1 0.0 2.1 2 0 0 2 2 2 0 AF2226-like SPOUT RNA Methylase fused to THUMP Ribosomal_L3 PF00297.22 gi|15678033|ref|NP_275147.1| - 1.7e-98 330.0 0.3 2e-98 329.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|15678034|ref|NP_275148.1| - 3.2e-49 167.2 0.2 3.7e-49 167.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF2149 PF09919.9 gi|15678034|ref|NP_275148.1| - 0.09 13.0 0.0 0.23 11.7 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) Ribosomal_L23 PF00276.20 gi|15678035|ref|NP_275149.1| - 1.2e-15 57.6 4.0 2.8e-15 56.5 4.0 1.5 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 gi|15678036|ref|NP_275150.1| - 2.9e-47 160.0 1.0 7.2e-47 158.7 1.2 1.5 2 0 0 2 2 2 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|15678036|ref|NP_275150.1| - 1e-25 89.5 0.0 2.8e-25 88.1 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|15678037|ref|NP_275151.1| - 5.5e-34 115.9 0.6 7.1e-34 115.6 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 Myb_DNA-bind_7 PF15963.5 gi|15678037|ref|NP_275151.1| - 0.12 12.3 0.5 0.21 11.5 0.5 1.3 1 0 0 1 1 1 0 Myb DNA-binding like Citrate_synt PF00285.21 gi|15678037|ref|NP_275151.1| - 0.17 10.9 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L22 PF00237.19 gi|15678038|ref|NP_275152.1| - 8.4e-32 109.5 0.0 1e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e DUF98 PF01947.16 gi|15678038|ref|NP_275152.1| - 0.066 13.2 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 p-hydroxybenzoic acid synthase acVLRF1 PF18859.1 gi|15678038|ref|NP_275152.1| - 0.1 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Actinobacteria/chloroflexi VLRF1 release factor Ribosomal_S3_C PF00189.20 gi|15678039|ref|NP_275153.1| - 2.1e-21 76.2 1.9 4.2e-21 75.2 1.9 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|15678039|ref|NP_275153.1| - 8.6e-18 64.0 0.1 2.3e-17 62.6 0.1 1.7 1 0 0 1 1 1 1 KH domain Latarcin PF10279.9 gi|15678039|ref|NP_275153.1| - 0.0043 17.4 0.0 2.3 8.7 0.0 2.7 1 1 1 2 2 2 1 Latarcin precursor KH_4 PF13083.6 gi|15678039|ref|NP_275153.1| - 0.012 15.5 0.0 0.03 14.2 0.0 1.8 1 0 0 1 1 1 0 KH domain KH_1 PF00013.29 gi|15678039|ref|NP_275153.1| - 0.017 14.9 0.1 0.1 12.4 0.0 2.2 2 0 0 2 2 2 0 KH domain Poly_export PF02563.16 gi|15678039|ref|NP_275153.1| - 0.034 14.4 0.4 1.2 9.4 0.1 2.7 1 1 1 2 2 2 0 Polysaccharide biosynthesis/export protein KH_5 PF13184.6 gi|15678039|ref|NP_275153.1| - 0.059 13.5 0.1 0.059 13.5 0.1 1.8 2 0 0 2 2 2 0 NusA-like KH domain Ribosomal_L29 PF00831.23 gi|15678040|ref|NP_275154.1| - 2.1e-18 66.0 0.7 2.5e-18 65.8 0.7 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Amidoligase_2 PF12224.8 gi|15678040|ref|NP_275154.1| - 0.0021 17.8 0.0 0.0022 17.7 0.0 1.0 1 0 0 1 1 1 1 Putative amidoligase enzyme DUF4355 PF14265.6 gi|15678040|ref|NP_275154.1| - 0.0054 17.0 0.2 0.0054 17.0 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4355) ING PF12998.7 gi|15678040|ref|NP_275154.1| - 0.025 15.2 0.4 0.03 14.9 0.4 1.0 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Spectrin_like PF18373.1 gi|15678040|ref|NP_275154.1| - 0.025 14.6 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 Spectrin like domain SUI1 PF01253.22 gi|15678041|ref|NP_275155.1| - 1.2e-19 70.6 1.7 1.5e-19 70.3 1.7 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|15678041|ref|NP_275155.1| - 6.8e-06 26.3 0.2 9.5e-06 25.8 0.2 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DTW PF03942.15 gi|15678041|ref|NP_275155.1| - 0.037 13.7 1.3 0.054 13.2 1.3 1.2 1 0 0 1 1 1 0 DTW domain DUF1858 PF08984.11 gi|15678041|ref|NP_275155.1| - 0.037 14.2 0.0 1.1 9.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1858) UPF0086 PF01868.16 gi|15678042|ref|NP_275156.1| - 2.9e-22 78.4 0.3 3.2e-22 78.2 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Myosin_N PF02736.19 gi|15678042|ref|NP_275156.1| - 0.0027 17.5 0.4 0.0056 16.5 0.1 1.6 2 0 0 2 2 2 1 Myosin N-terminal SH3-like domain MS_channel PF00924.18 gi|15678042|ref|NP_275156.1| - 0.14 11.6 0.2 0.21 11.1 0.1 1.3 1 1 0 1 1 1 0 Mechanosensitive ion channel Ribosomal_S17 PF00366.20 gi|15678043|ref|NP_275157.1| - 1.8e-26 92.1 4.2 2.3e-26 91.7 4.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L14 PF00238.19 gi|15678044|ref|NP_275158.1| - 3.2e-35 120.9 1.3 3.6e-35 120.7 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e FeoA PF04023.14 gi|15678044|ref|NP_275158.1| - 0.065 13.5 2.7 0.22 11.8 1.4 2.3 1 1 1 2 2 2 0 FeoA domain Ribosomal_L26 PF16906.5 gi|15678045|ref|NP_275159.1| - 2.9e-33 114.2 0.5 3.4e-33 113.9 0.5 1.0 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|15678045|ref|NP_275159.1| - 2.3e-09 36.9 3.9 2.8e-09 36.6 2.3 1.9 2 0 0 2 2 2 1 KOW motif Ribosomal_S4e PF00900.20 gi|15678046|ref|NP_275160.1| - 3.5e-29 100.5 0.1 8.4e-29 99.3 0.0 1.7 2 0 0 2 2 2 1 Ribosomal family S4e RS4NT PF08071.12 gi|15678046|ref|NP_275160.1| - 7.2e-15 54.8 7.7 1.3e-14 54.0 7.7 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|15678046|ref|NP_275160.1| - 2.8e-11 42.9 0.1 5.5e-11 42.0 0.1 1.5 1 0 0 1 1 1 1 S4 domain 40S_S4_C PF16121.5 gi|15678046|ref|NP_275160.1| - 1.9e-05 24.2 0.1 8.8e-05 22.1 0.0 2.2 3 0 0 3 3 3 1 40S ribosomal protein S4 C-terminus KOW PF00467.29 gi|15678046|ref|NP_275160.1| - 0.0003 20.6 1.3 0.00058 19.7 0.0 2.2 2 0 0 2 2 2 1 KOW motif Ribosomal_L5_C PF00673.21 gi|15678047|ref|NP_275161.1| - 4.1e-24 84.6 0.0 7.4e-24 83.8 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|15678047|ref|NP_275161.1| - 3.9e-18 65.5 0.1 9.5e-18 64.3 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|15678048|ref|NP_275162.1| - 1.4e-13 50.4 3.2 1.6e-13 50.2 3.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.14 gi|15678048|ref|NP_275162.1| - 0.039 13.8 2.9 0.057 13.3 2.9 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Ribosomal_S8 PF00410.19 gi|15678049|ref|NP_275163.1| - 4.6e-29 100.9 0.0 5.4e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|15678050|ref|NP_275164.1| - 4.1e-36 123.5 9.0 2.9e-21 75.9 1.3 2.0 2 0 0 2 2 2 2 Ribosomal protein L6 CooT PF10133.9 gi|15678050|ref|NP_275164.1| - 0.079 13.2 0.2 7.5 6.9 0.0 3.1 3 0 0 3 3 3 0 CO dehydrogenase accessory protein CooT TRI5 PF06330.11 gi|15678050|ref|NP_275164.1| - 0.14 11.0 0.0 0.19 10.6 0.0 1.2 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) Ribosomal_L32e PF01655.18 gi|15678051|ref|NP_275165.1| - 6.4e-41 139.1 0.5 7.1e-41 139.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.20 gi|15678052|ref|NP_275166.1| - 2.1e-55 186.8 11.3 2.3e-55 186.6 11.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L5e PF17144.4 gi|15678053|ref|NP_275167.1| - 1.2e-36 126.2 3.6 3.6e-25 88.9 2.0 2.6 2 1 1 3 3 3 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|15678053|ref|NP_275167.1| - 7.9e-08 32.7 0.1 1.1e-07 32.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L18_c PF14204.6 gi|15678053|ref|NP_275167.1| - 5.1e-06 27.3 0.1 9.2e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_S5 PF00333.20 gi|15678054|ref|NP_275168.1| - 2.6e-24 85.0 1.9 5.9e-24 83.8 1.9 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|15678054|ref|NP_275168.1| - 4.9e-22 77.2 0.1 8.2e-22 76.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|15678055|ref|NP_275169.1| - 9.2e-16 57.5 0.0 1.9e-15 56.4 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|15678056|ref|NP_275170.1| - 2.5e-23 83.1 0.0 3.1e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 gi|15678057|ref|NP_275171.1| - 8.6e-72 242.0 15.7 1e-71 241.7 15.7 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|15678057|ref|NP_275171.1| - 7.9e-14 51.2 2.6 1.8e-13 50.1 1.8 2.1 2 0 0 2 2 2 1 Plug domain of Sec61p RseC_MucC PF04246.12 gi|15678057|ref|NP_275171.1| - 0.049 13.6 6.8 0.21 11.6 0.1 3.3 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Phage_holin_5_1 PF06946.11 gi|15678057|ref|NP_275171.1| - 0.052 13.9 0.7 0.13 12.7 0.0 2.0 2 0 0 2 2 2 0 Bacteriophage A118-like holin, Hol118 AAA_17 PF13207.6 gi|15678058|ref|NP_275172.1| - 5.3e-41 140.2 0.0 6.8e-41 139.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15678058|ref|NP_275172.1| - 1.4e-06 28.8 0.1 5.2e-06 27.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|15678058|ref|NP_275172.1| - 1.9e-06 28.1 0.0 3.5e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|15678058|ref|NP_275172.1| - 0.0094 15.2 0.7 0.054 12.7 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 gi|15678058|ref|NP_275172.1| - 0.017 14.7 0.2 0.02 14.5 0.2 1.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 gi|15678058|ref|NP_275172.1| - 0.032 13.4 0.0 0.059 12.5 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain dNK PF01712.19 gi|15678058|ref|NP_275172.1| - 0.041 13.7 0.2 0.32 10.8 0.1 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA_28 PF13521.6 gi|15678058|ref|NP_275172.1| - 0.046 14.0 0.2 0.23 11.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|15678058|ref|NP_275172.1| - 0.049 12.9 1.9 0.11 11.7 0.1 2.3 2 1 0 2 2 2 0 Zeta toxin AAA_19 PF13245.6 gi|15678058|ref|NP_275172.1| - 0.13 12.6 0.5 0.28 11.5 0.5 1.9 1 1 0 1 1 1 0 AAA domain EMC3_TMCO1 PF01956.16 gi|15678059|ref|NP_275173.1| - 1.9e-44 151.4 9.8 2.1e-44 151.3 9.8 1.0 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like DUF2232 PF09991.9 gi|15678059|ref|NP_275173.1| - 0.022 13.9 6.8 0.038 13.2 6.8 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2232) DUF2721 PF11026.8 gi|15678059|ref|NP_275173.1| - 0.054 13.4 0.1 0.074 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Bul1_C PF04426.12 gi|15678059|ref|NP_275173.1| - 0.076 12.4 1.3 0.11 11.9 1.3 1.2 1 0 0 1 1 1 0 Bul1 C terminus GTA_holin_3TM PF11351.8 gi|15678059|ref|NP_275173.1| - 0.1 13.2 1.1 0.16 12.5 1.1 1.3 1 0 0 1 1 1 0 Holin of 3TMs, for gene-transfer release DPM3 PF08285.11 gi|15678059|ref|NP_275173.1| - 0.11 12.7 0.1 0.11 12.7 0.1 2.7 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF4199 PF13858.6 gi|15678059|ref|NP_275173.1| - 0.47 10.8 13.1 1.7 9.0 13.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Ribosomal_L34e PF01199.18 gi|15678060|ref|NP_275174.1| - 3.4e-27 94.6 7.8 3.9e-27 94.4 7.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e DZR PF12773.7 gi|15678060|ref|NP_275174.1| - 0.006 16.6 0.3 0.0096 15.9 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon C1_2 PF03107.16 gi|15678060|ref|NP_275174.1| - 0.025 14.9 0.4 4.5 7.7 0.0 2.2 2 0 0 2 2 2 0 C1 domain DUF2197 PF09963.9 gi|15678060|ref|NP_275174.1| - 0.15 12.3 0.4 0.15 12.3 0.4 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) PHD PF00628.29 gi|15678060|ref|NP_275174.1| - 0.16 11.9 1.7 0.89 9.5 1.7 1.9 1 1 0 1 1 1 0 PHD-finger Tnp_zf-ribbon_2 PF13842.6 gi|15678060|ref|NP_275174.1| - 0.26 12.1 4.0 0.68 10.8 0.1 2.5 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|15678060|ref|NP_275174.1| - 3.1 7.8 11.6 1.2 9.1 0.7 2.5 3 0 0 3 3 3 0 SprT-like zinc ribbon domain Cytidylate_kin2 PF13189.6 gi|15678061|ref|NP_275175.1| - 1.1e-25 90.8 5.1 1.2e-24 87.5 5.1 1.9 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|15678061|ref|NP_275175.1| - 8.3e-16 58.7 0.2 1.1e-15 58.3 0.2 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15678061|ref|NP_275175.1| - 2.2e-11 44.3 0.3 3.2e-11 43.8 0.3 1.3 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|15678061|ref|NP_275175.1| - 2.5e-10 40.5 6.0 2e-06 27.7 0.3 2.0 1 1 1 2 2 2 2 Cytidylate kinase AAA_28 PF13521.6 gi|15678061|ref|NP_275175.1| - 0.00042 20.6 0.7 0.00099 19.4 0.1 1.7 1 1 1 2 2 2 1 AAA domain PRK PF00485.18 gi|15678061|ref|NP_275175.1| - 0.0063 16.3 0.4 0.014 15.1 0.1 1.8 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family ADK PF00406.22 gi|15678061|ref|NP_275175.1| - 0.0082 16.3 0.3 0.02 15.0 0.3 1.8 1 1 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 gi|15678061|ref|NP_275175.1| - 0.029 14.5 0.3 0.082 13.1 0.3 1.7 1 1 0 1 1 1 0 AAA domain CoaE PF01121.20 gi|15678061|ref|NP_275175.1| - 0.046 13.4 1.6 0.066 12.9 0.1 1.8 1 1 1 2 2 2 0 Dephospho-CoA kinase dNK PF01712.19 gi|15678061|ref|NP_275175.1| - 0.057 13.3 0.5 1.2 8.9 0.1 2.3 1 1 0 2 2 2 0 Deoxynucleoside kinase KOW PF00467.29 gi|15678062|ref|NP_275176.1| - 0.00019 21.3 1.0 0.00031 20.6 1.0 1.4 1 1 0 1 1 1 1 KOW motif TruB_N PF01509.18 gi|15678063|ref|NP_275177.1| - 2e-28 99.7 0.2 5.3e-17 62.6 0.0 3.1 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|15678063|ref|NP_275177.1| - 8.4e-26 89.9 0.0 1.7e-25 88.9 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|15678063|ref|NP_275177.1| - 1.5e-20 72.9 0.6 3.3e-20 71.8 0.6 1.6 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.12 gi|15678063|ref|NP_275177.1| - 1.1e-16 60.7 0.0 3.4e-16 59.1 0.0 1.8 2 0 0 2 2 2 1 DKCLD (NUC011) domain Ribosomal_S13 PF00416.22 gi|15678064|ref|NP_275178.1| - 1.1e-43 148.6 0.9 1.3e-43 148.4 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|15678064|ref|NP_275178.1| - 0.00076 18.4 0.0 0.00089 18.1 0.0 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF1192 PF06698.11 gi|15678064|ref|NP_275178.1| - 0.02 14.9 0.4 0.13 12.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) DUF5053 PF16476.5 gi|15678064|ref|NP_275178.1| - 0.026 14.2 0.0 0.3 10.8 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF5053) S4 PF01479.25 gi|15678065|ref|NP_275179.1| - 6.3e-14 51.4 0.3 1.2e-13 50.5 0.3 1.5 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 gi|15678065|ref|NP_275179.1| - 8.7e-05 23.4 0.9 0.0002 22.2 0.3 1.8 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S11 PF00411.19 gi|15678066|ref|NP_275180.1| - 6e-45 152.2 2.7 8e-45 151.8 2.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 RNA_pol_A_bac PF01000.26 gi|15678067|ref|NP_275181.1| - 1.6e-33 115.4 0.0 3.8e-33 114.2 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|15678067|ref|NP_275181.1| - 6.3e-20 70.4 0.0 8e-20 70.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_9 PF13187.6 gi|15678067|ref|NP_275181.1| - 2.1e-06 27.8 15.4 2.5e-06 27.6 10.8 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678067|ref|NP_275181.1| - 1.9e-05 24.3 12.2 0.00071 19.3 2.5 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678067|ref|NP_275181.1| - 2.6e-05 24.2 10.1 2.6e-05 24.2 10.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain RNA_pol_L_2 PF13656.6 gi|15678067|ref|NP_275181.1| - 0.00054 19.7 0.0 0.0014 18.4 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_16 PF13484.6 gi|15678067|ref|NP_275181.1| - 0.004 18.1 14.7 0.04 14.8 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|15678067|ref|NP_275181.1| - 0.0059 17.2 12.9 0.0059 17.2 12.9 2.8 1 1 2 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678067|ref|NP_275181.1| - 0.013 15.5 3.4 0.013 15.5 3.4 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678067|ref|NP_275181.1| - 0.027 14.5 4.0 0.027 14.5 4.0 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15678067|ref|NP_275181.1| - 0.14 12.3 0.5 0.14 12.3 0.5 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain UPF0254 PF06787.11 gi|15678067|ref|NP_275181.1| - 0.15 11.8 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) Fer4_17 PF13534.6 gi|15678067|ref|NP_275181.1| - 0.8 10.3 15.7 1 10.0 1.0 3.2 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678067|ref|NP_275181.1| - 1.5 9.4 17.9 0.37 11.3 1.5 2.9 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15678067|ref|NP_275181.1| - 1.7 9.5 12.9 0.43 11.4 3.1 2.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|15678067|ref|NP_275181.1| - 6 7.1 14.4 0.6 10.3 8.9 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Ribosomal_L18 PF17135.4 gi|15678068|ref|NP_275182.1| - 2e-14 53.4 0.2 2.3e-14 53.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|15678068|ref|NP_275182.1| - 6.4e-09 36.6 0.1 2e-08 35.0 0.1 1.8 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_S9 PF00380.19 gi|15678069|ref|NP_275183.1| - 1e-32 113.2 0.3 1.7e-32 112.5 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|15678069|ref|NP_275183.1| - 4.6e-10 39.8 0.0 2.2e-08 34.4 0.0 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 RNA_pol_N PF01194.17 gi|15678070|ref|NP_275184.1| - 1.1e-26 92.8 0.2 1.2e-26 92.7 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 gi|15678070|ref|NP_275184.1| - 0.021 15.1 0.1 0.025 14.8 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) RNA_pol_Rpb6 PF01192.22 gi|15678071|ref|NP_275185.1| - 2e-14 53.3 0.2 2.3e-14 53.1 0.2 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb6 Enolase_C PF00113.22 gi|15678072|ref|NP_275186.1| - 2.5e-73 246.9 0.0 3.2e-73 246.6 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|15678072|ref|NP_275186.1| - 1.7e-40 138.3 0.1 2.9e-40 137.5 0.1 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|15678072|ref|NP_275186.1| - 7.6e-10 38.7 0.0 1.2e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like Ribosomal_S2 PF00318.20 gi|15678073|ref|NP_275187.1| - 1.8e-26 92.7 0.0 1.5e-12 47.2 0.1 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 Memo PF01875.17 gi|15678074|ref|NP_275188.1| - 1.3e-95 319.7 0.0 1.4e-95 319.5 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|15678074|ref|NP_275188.1| - 0.0027 16.8 0.1 0.0052 15.9 0.1 1.4 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase GHMP_kinases_N PF00288.26 gi|15678075|ref|NP_275189.1| - 1.4e-12 47.7 0.2 3.8e-12 46.3 0.2 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15678075|ref|NP_275189.1| - 2.5e-11 43.8 1.2 4.5e-11 43.0 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal AA_kinase PF00696.28 gi|15678076|ref|NP_275190.1| - 3.2e-48 164.4 0.0 3.6e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family FMN_dh PF01070.18 gi|15678077|ref|NP_275191.1| - 4.1e-33 114.9 3.6 1.3e-21 77.1 4.1 2.1 1 1 0 2 2 2 2 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|15678077|ref|NP_275191.1| - 7.7e-06 25.5 0.7 0.009 15.5 0.2 3.2 3 0 0 3 3 3 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|15678077|ref|NP_275191.1| - 1.6e-05 24.1 4.2 0.00077 18.6 3.5 2.5 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|15678077|ref|NP_275191.1| - 3.7e-05 23.0 1.6 3.7e-05 23.0 1.6 1.7 2 0 0 2 2 2 1 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|15678077|ref|NP_275191.1| - 0.00018 20.8 0.5 0.00018 20.8 0.5 2.5 3 0 0 3 3 3 1 Dihydroorotate dehydrogenase NMO PF03060.15 gi|15678077|ref|NP_275191.1| - 0.0003 20.3 1.5 0.0003 20.3 1.5 1.9 2 0 0 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.12 gi|15678077|ref|NP_275191.1| - 0.00066 18.9 6.1 0.00096 18.4 2.6 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF561) ThiG PF05690.14 gi|15678077|ref|NP_275191.1| - 0.00079 18.8 7.2 0.014 14.7 0.5 2.6 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG TPP_enzyme_M PF00205.22 gi|15678077|ref|NP_275191.1| - 0.0035 17.1 0.3 0.42 10.3 0.0 3.5 3 1 0 4 4 4 1 Thiamine pyrophosphate enzyme, central domain SOR_SNZ PF01680.17 gi|15678077|ref|NP_275191.1| - 0.026 14.3 3.3 0.076 12.8 0.5 2.2 1 1 1 2 2 2 0 SOR/SNZ family RMMBL PF07521.12 gi|15678078|ref|NP_275192.1| - 3.1e-13 49.5 0.9 1.3e-11 44.2 0.1 2.6 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|15678078|ref|NP_275192.1| - 2.1e-09 37.2 0.2 5.1e-09 35.9 0.2 1.7 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15678078|ref|NP_275192.1| - 7.3e-08 32.6 3.6 2.5e-07 30.9 3.6 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily polyprenyl_synt PF00348.17 gi|15678079|ref|NP_275193.1| - 1.4e-78 263.5 0.0 1.8e-78 263.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Fes1 PF08609.10 gi|15678079|ref|NP_275193.1| - 0.19 12.6 0.5 5.6 7.9 0.1 2.6 2 0 0 2 2 2 0 Nucleotide exchange factor Fes1 tRNA-synt_1c PF00749.21 gi|15678080|ref|NP_275194.1| - 1e-82 277.6 0.0 1.4e-82 277.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|15678080|ref|NP_275194.1| - 1.6e-23 83.5 0.0 2.9e-23 82.6 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1f PF01921.18 gi|15678080|ref|NP_275194.1| - 0.0087 15.0 0.0 2.4 7.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) Aminotran_1_2 PF00155.21 gi|15678081|ref|NP_275195.1| - 2.1e-29 102.8 0.0 9.6e-24 84.2 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class I and II Zn_dep_PLPC PF00882.18 gi|15678082|ref|NP_275196.1| - 5.9e-11 42.7 0.2 7.3e-11 42.4 0.2 1.1 1 0 0 1 1 1 1 Zinc dependent phospholipase C Glyco_hydro_71 PF03659.14 gi|15678082|ref|NP_275196.1| - 0.037 12.9 0.1 0.048 12.5 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 Prok-E2_E PF14462.6 gi|15678082|ref|NP_275196.1| - 0.097 12.5 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Prokaryotic E2 family E FmdE PF02663.14 gi|15678084|ref|NP_275198.1| - 3.4e-15 56.2 0.1 8.9e-09 35.5 0.0 2.6 2 0 0 2 2 2 2 FmdE, Molybdenum formylmethanofuran dehydrogenase operon PRRSV_Env PF02340.15 gi|15678084|ref|NP_275198.1| - 0.11 11.8 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 PRRSV putative envelope protein FmdE PF02663.14 gi|15678085|ref|NP_275199.1| - 0.031 14.3 2.9 0.071 13.2 1.3 2.2 2 1 0 2 2 2 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon DUF5643 PF18705.1 gi|15678086|ref|NP_275200.1| - 0.024 14.6 0.5 0.059 13.4 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5643) fn3_5 PF06280.12 gi|15678088|ref|NP_275202.1| - 0.0049 17.5 0.0 0.009 16.7 0.0 1.4 1 1 0 1 1 1 1 Fn3-like domain DUF916 PF06030.12 gi|15678088|ref|NP_275202.1| - 0.018 15.1 0.0 0.52 10.4 0.0 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF916) FixG_C PF11614.8 gi|15678088|ref|NP_275202.1| - 0.019 15.2 0.2 0.26 11.5 0.0 2.6 1 1 2 3 3 3 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF11 PF01345.18 gi|15678088|ref|NP_275202.1| - 0.02 15.2 0.0 0.038 14.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF11 Fn3-like PF14310.6 gi|15678088|ref|NP_275202.1| - 0.063 13.4 0.0 0.94 9.6 0.0 2.6 1 1 1 2 2 2 0 Fibronectin type III-like domain Ig_mannosidase PF17753.1 gi|15678088|ref|NP_275202.1| - 0.14 11.9 0.0 0.49 10.2 0.0 1.9 1 1 0 1 1 1 0 Ig-fold domain DUF4731 PF15875.5 gi|15678088|ref|NP_275202.1| - 0.75 10.0 2.5 0.57 10.4 0.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4731) Radical_SAM PF04055.21 gi|15678091|ref|NP_275205.1| - 7.6e-21 75.2 0.3 1.3e-20 74.4 0.3 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15678091|ref|NP_275205.1| - 1.4e-05 25.4 0.0 2.3e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15678091|ref|NP_275205.1| - 0.00025 21.2 0.0 0.00039 20.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain CMD PF02627.20 gi|15678092|ref|NP_275206.1| - 5.3e-14 52.0 0.1 6.3e-14 51.8 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family CrgA PF06781.12 gi|15678093|ref|NP_275207.1| - 8.9 6.4 6.9 3.7 7.7 0.2 2.4 1 1 1 2 2 2 0 Cell division protein CrgA DUF3929 PF13066.6 gi|15678094|ref|NP_275208.1| - 0.052 13.6 0.0 0.071 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3929) TPR_1 PF00515.28 gi|15678096|ref|NP_275210.1| - 7.8e-10 38.2 0.6 7.8e-10 38.2 0.6 2.0 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678096|ref|NP_275210.1| - 7.3e-09 35.1 2.6 2.3e-08 33.5 0.2 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678096|ref|NP_275210.1| - 8.3e-08 31.9 3.7 1.2e-07 31.4 0.4 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678096|ref|NP_275210.1| - 3.6e-07 29.7 0.1 6.3e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 TPR repeat TPR_7 PF13176.6 gi|15678096|ref|NP_275210.1| - 0.00012 21.8 0.1 0.00021 21.1 0.1 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678096|ref|NP_275210.1| - 0.00012 22.3 0.1 0.00027 21.2 0.0 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678096|ref|NP_275210.1| - 0.00061 20.4 0.0 0.00082 20.0 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|15678096|ref|NP_275210.1| - 0.00073 19.6 0.9 0.001 19.1 0.9 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|15678096|ref|NP_275210.1| - 0.004 17.0 0.0 0.0068 16.2 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678096|ref|NP_275210.1| - 0.0051 17.3 0.0 0.0073 16.8 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678096|ref|NP_275210.1| - 0.0053 17.3 0.5 0.06 14.0 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|15678096|ref|NP_275210.1| - 0.0087 15.3 0.0 0.0088 15.3 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat FAT PF02259.23 gi|15678096|ref|NP_275210.1| - 0.0088 15.3 0.1 0.0088 15.3 0.1 1.0 1 0 0 1 1 1 1 FAT domain TPR_16 PF13432.6 gi|15678096|ref|NP_275210.1| - 0.013 16.1 0.0 0.016 15.9 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15678096|ref|NP_275210.1| - 0.017 15.4 1.1 1.2 9.7 0.1 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat Lipocalin PF00061.23 gi|15678096|ref|NP_275210.1| - 0.042 14.0 0.1 0.044 14.0 0.1 1.0 1 0 0 1 1 1 0 Lipocalin / cytosolic fatty-acid binding protein family TPR_1 PF00515.28 gi|15679902|ref|NP_275211.1| - 9.6e-75 243.6 19.6 1.2e-14 53.4 0.1 6.0 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15679902|ref|NP_275211.1| - 2.3e-61 199.0 13.4 9.6e-12 44.1 0.2 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15679902|ref|NP_275211.1| - 1.3e-52 171.6 14.4 5.1e-11 41.9 0.1 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15679902|ref|NP_275211.1| - 3.3e-51 170.7 13.2 4.3e-12 45.5 0.1 6.1 1 1 5 6 6 6 6 TPR repeat TPR_17 PF13431.6 gi|15679902|ref|NP_275211.1| - 4.9e-40 133.0 11.5 6.1e-09 35.6 0.1 6.4 6 1 1 7 7 6 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15679902|ref|NP_275211.1| - 1.2e-35 121.6 5.6 9.1e-16 57.9 0.2 5.5 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15679902|ref|NP_275211.1| - 1e-32 110.0 0.1 0.00022 21.8 0.0 6.1 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15679902|ref|NP_275211.1| - 1.5e-32 111.9 0.0 9.6e-11 42.2 0.0 3.9 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15679902|ref|NP_275211.1| - 7.2e-31 106.2 0.0 1.6e-08 34.6 0.0 4.6 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15679902|ref|NP_275211.1| - 6.8e-29 97.7 0.1 2.7e-07 30.2 0.0 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15679902|ref|NP_275211.1| - 5.4e-23 81.3 0.8 1.6e-07 31.7 0.1 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15679902|ref|NP_275211.1| - 1.9e-22 78.4 1.9 3e-05 23.7 0.2 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15679902|ref|NP_275211.1| - 9.4e-16 57.3 0.1 0.48 11.2 0.0 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15679902|ref|NP_275211.1| - 1.5e-13 50.7 15.1 2.8e-06 27.5 1.5 3.1 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 gi|15679902|ref|NP_275211.1| - 3.5e-13 49.4 10.2 0.028 14.5 0.1 6.2 5 1 0 6 6 6 2 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 gi|15679902|ref|NP_275211.1| - 2.4e-12 46.7 11.2 0.17 12.0 0.1 5.6 5 1 1 6 6 6 5 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|15679902|ref|NP_275211.1| - 4.5e-12 45.7 0.2 2.1e-05 23.7 0.0 3.2 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|15679902|ref|NP_275211.1| - 1.5e-09 38.0 0.5 0.014 15.5 0.0 4.8 1 1 4 5 5 5 3 Domain of Unknown Function (DUF3856) TPR_15 PF13429.6 gi|15679902|ref|NP_275211.1| - 7.7e-08 31.9 0.1 0.0023 17.2 0.0 4.0 2 1 2 4 4 4 1 Tetratricopeptide repeat DUF5113 PF17140.4 gi|15679902|ref|NP_275211.1| - 2.4e-07 30.7 3.0 2.8 7.7 0.0 5.1 2 2 4 6 6 6 1 Domain of unknown function (DUF5113) SRP_TPR_like PF17004.5 gi|15679902|ref|NP_275211.1| - 7.3e-07 29.2 5.2 0.0046 17.0 0.1 4.0 1 1 3 4 4 4 3 Putative TPR-like repeat FAT PF02259.23 gi|15679902|ref|NP_275211.1| - 1e-06 28.3 6.6 0.15 11.3 0.5 4.8 1 1 3 4 4 4 2 FAT domain HTH_Bact PF18768.1 gi|15679902|ref|NP_275211.1| - 1.1e-05 24.9 2.3 8.1 6.1 0.0 5.6 6 0 0 6 6 6 0 Helix-turn-helix bacterial domain EST1_DNA_bind PF10373.9 gi|15679902|ref|NP_275211.1| - 3.1e-05 23.6 0.0 0.78 9.2 0.0 4.6 4 1 1 5 5 5 1 Est1 DNA/RNA binding domain BTAD PF03704.17 gi|15679902|ref|NP_275211.1| - 3.9e-05 24.1 0.2 0.013 15.9 0.0 2.7 1 1 0 2 2 2 1 Bacterial transcriptional activator domain NRBF2_MIT PF17169.4 gi|15679902|ref|NP_275211.1| - 4.6e-05 23.5 7.9 1 9.6 0.0 5.8 3 1 3 6 6 6 1 MIT domain of nuclear receptor-binding factor 2 Coatomer_E PF04733.14 gi|15679902|ref|NP_275211.1| - 7.6e-05 22.3 1.7 0.056 12.8 0.1 3.1 1 1 3 4 4 4 3 Coatomer epsilon subunit Sel1 PF08238.12 gi|15679902|ref|NP_275211.1| - 0.00037 21.1 7.4 4.1 8.2 0.0 5.4 6 0 0 6 6 5 0 Sel1 repeat SAICAR_synt PF01259.18 gi|15679902|ref|NP_275211.1| - 0.00065 19.4 0.0 0.26 10.9 0.0 2.7 1 1 1 3 3 3 1 SAICAR synthetase Rapsyn_N PF10579.9 gi|15679902|ref|NP_275211.1| - 0.00075 19.5 1.8 0.29 11.3 0.0 3.4 3 1 2 5 5 3 1 Rapsyn N-terminal myristoylation and linker region PPR PF01535.20 gi|15679902|ref|NP_275211.1| - 0.00081 19.5 8.2 6 7.3 0.1 5.9 6 0 0 6 6 6 0 PPR repeat APP_E2 PF12925.7 gi|15679902|ref|NP_275211.1| - 0.00097 18.9 7.1 0.56 9.9 1.1 4.6 1 1 1 5 5 5 1 E2 domain of amyloid precursor protein Phage_tail_X PF05489.12 gi|15679902|ref|NP_275211.1| - 0.0011 18.6 0.0 22 4.8 0.0 4.1 4 0 0 4 4 4 0 Phage Tail Protein X TPR_21 PF09976.9 gi|15679902|ref|NP_275211.1| - 0.0024 17.6 0.1 3.8 7.2 0.0 3.8 1 1 2 3 3 3 1 Tetratricopeptide repeat-like domain RPN7 PF10602.9 gi|15679902|ref|NP_275211.1| - 0.0037 17.0 3.0 0.39 10.4 0.1 4.1 2 2 1 3 3 3 1 26S proteasome subunit RPN7 TPR_3 PF07720.12 gi|15679902|ref|NP_275211.1| - 0.0046 16.9 5.1 5.1 7.2 0.0 4.6 5 0 0 5 5 4 0 Tetratricopeptide repeat Rota_NSP3 PF01665.16 gi|15679902|ref|NP_275211.1| - 0.0062 15.7 0.7 7.3 5.6 0.0 3.6 1 1 3 4 4 4 0 Rotavirus non-structural protein NSP3 TPR_4 PF07721.14 gi|15679902|ref|NP_275211.1| - 0.0097 16.4 0.0 1.2 9.9 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 gi|15679902|ref|NP_275211.1| - 0.016 15.6 0.1 24 5.4 0.0 3.5 1 1 1 3 3 3 0 Alkyl sulfatase dimerisation Sda PF08970.10 gi|15679902|ref|NP_275211.1| - 0.032 14.0 14.3 14 5.5 0.4 6.1 6 0 0 6 6 6 0 Sporulation inhibitor A ChAPs PF09295.10 gi|15679902|ref|NP_275211.1| - 0.05 12.6 0.1 8.4 5.3 0.0 2.5 1 1 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Glyoxalase PF00903.25 gi|15679902|ref|NP_275211.1| - 0.063 13.5 0.0 20 5.4 0.0 3.6 4 0 0 4 4 4 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PPTA PF01239.22 gi|15679902|ref|NP_275211.1| - 0.093 12.5 3.1 0.34 10.7 0.0 3.4 4 0 0 4 4 3 0 Protein prenyltransferase alpha subunit repeat SHNi-TPR PF10516.9 gi|15679902|ref|NP_275211.1| - 0.28 10.7 12.7 4.2 6.9 0.0 4.8 6 0 0 6 6 6 0 SHNi-TPR Bacteriocin_IIi PF11758.8 gi|15679902|ref|NP_275211.1| - 6 6.8 14.6 19 5.2 0.0 4.8 5 0 0 5 5 4 0 Aureocin-like type II bacteriocin TPR_1 PF00515.28 gi|15678100|ref|NP_275215.1| - 1.7e-120 388.5 58.9 1.4e-13 50.0 0.3 11.2 11 0 0 11 11 11 11 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678100|ref|NP_275215.1| - 2.3e-101 323.9 51.1 1.3e-10 40.6 0.3 11.6 11 1 1 12 12 12 11 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678100|ref|NP_275215.1| - 5.3e-92 294.5 47.6 3.4e-09 36.2 0.0 11.5 11 1 1 12 12 12 11 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678100|ref|NP_275215.1| - 6.7e-84 275.3 46.8 4.1e-11 42.4 0.8 11.1 1 1 10 11 11 11 11 TPR repeat TPR_17 PF13431.6 gi|15678100|ref|NP_275215.1| - 4.6e-71 230.2 40.2 8.5e-08 32.1 0.5 11.6 12 0 0 12 12 11 10 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678100|ref|NP_275215.1| - 2e-63 210.6 17.4 7.5e-14 51.8 0.7 8.6 2 2 5 7 7 7 7 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15678100|ref|NP_275215.1| - 3.5e-60 200.4 0.1 4.8e-12 46.3 0.0 7.2 4 3 2 7 7 7 7 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678100|ref|NP_275215.1| - 2.5e-57 186.6 9.8 0.00014 22.4 0.1 11.1 1 1 10 11 11 11 11 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15678100|ref|NP_275215.1| - 1.7e-54 177.9 12.3 2.4e-05 24.0 0.0 11.1 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678100|ref|NP_275215.1| - 5.6e-44 148.5 22.2 2.8e-10 40.5 0.1 6.5 4 2 0 6 6 6 6 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15678100|ref|NP_275215.1| - 1e-40 137.7 0.0 1.6e-07 31.4 0.0 7.0 2 1 5 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15678100|ref|NP_275215.1| - 7e-37 124.3 18.6 0.00045 20.0 0.2 11.1 11 0 0 11 11 11 8 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678100|ref|NP_275215.1| - 8.3e-31 104.6 22.8 0.0096 16.5 0.2 11.5 11 1 1 12 12 11 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15678100|ref|NP_275215.1| - 1.2e-26 92.7 31.4 7.1e-08 32.6 2.1 4.9 3 2 0 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 gi|15678100|ref|NP_275215.1| - 6.5e-23 80.6 33.6 0.0058 16.7 0.5 10.7 8 3 3 11 11 11 7 MIT (microtubule interacting and transport) domain TPR_15 PF13429.6 gi|15678100|ref|NP_275215.1| - 8.1e-18 64.6 12.8 3.2e-05 23.3 0.4 6.4 1 1 5 6 6 6 6 Tetratricopeptide repeat NARP1 PF12569.8 gi|15678100|ref|NP_275215.1| - 1.4e-17 63.9 18.4 0.00066 18.7 0.1 6.5 1 1 6 8 8 8 6 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|15678100|ref|NP_275215.1| - 3.4e-16 59.6 11.7 0.14 12.2 0.1 8.0 1 1 9 10 10 10 6 Domain of Unknown Function (DUF3856) TPR_5 PF12688.7 gi|15678100|ref|NP_275215.1| - 3.7e-14 53.0 0.7 0.00041 20.6 0.0 5.6 4 2 1 5 5 5 3 Tetratrico peptide repeat Fis1_TPR_C PF14853.6 gi|15678100|ref|NP_275215.1| - 8.3e-13 48.2 41.4 0.015 15.4 0.0 9.5 8 3 3 11 11 9 5 Fis1 C-terminal tetratricopeptide repeat Coatomer_E PF04733.14 gi|15678100|ref|NP_275215.1| - 2.7e-12 46.7 9.6 0.0093 15.4 0.7 5.4 1 1 4 5 5 5 4 Coatomer epsilon subunit FAT PF02259.23 gi|15678100|ref|NP_275215.1| - 1.6e-09 37.4 25.9 0.00048 19.4 0.2 6.6 1 1 4 6 6 6 4 FAT domain SRP_TPR_like PF17004.5 gi|15678100|ref|NP_275215.1| - 4.2e-09 36.5 25.5 0.0015 18.5 0.8 5.2 3 2 1 4 4 4 3 Putative TPR-like repeat DUF5113 PF17140.4 gi|15678100|ref|NP_275215.1| - 6.8e-09 35.7 11.0 0.76 9.6 0.4 8.0 2 2 5 8 8 8 2 Domain of unknown function (DUF5113) HTH_Bact PF18768.1 gi|15678100|ref|NP_275215.1| - 1.8e-07 30.6 12.5 2.3 7.8 0.0 9.6 9 1 0 9 9 9 1 Helix-turn-helix bacterial domain SAICAR_synt PF01259.18 gi|15678100|ref|NP_275215.1| - 2.7e-07 30.5 1.4 0.26 10.8 0.0 4.7 3 2 1 5 5 5 2 SAICAR synthetase Sel1 PF08238.12 gi|15678100|ref|NP_275215.1| - 3.7e-07 30.6 27.9 3.8 8.3 0.0 9.4 10 1 0 10 10 8 0 Sel1 repeat DUF627 PF04781.12 gi|15678100|ref|NP_275215.1| - 1.3e-05 25.1 9.5 0.38 10.8 0.2 5.5 5 1 1 6 6 6 2 Protein of unknown function (DUF627) RPN7 PF10602.9 gi|15678100|ref|NP_275215.1| - 1.9e-05 24.5 22.8 0.58 9.8 1.1 7.9 2 1 7 9 9 9 2 26S proteasome subunit RPN7 PPR PF01535.20 gi|15678100|ref|NP_275215.1| - 2e-05 24.5 29.1 2.1 8.8 0.2 10.8 12 0 0 12 12 11 1 PPR repeat SHNi-TPR PF10516.9 gi|15678100|ref|NP_275215.1| - 2.1e-05 23.9 24.0 0.068 12.6 0.0 8.9 10 0 0 10 10 9 1 SHNi-TPR UPF0122 PF04297.14 gi|15678100|ref|NP_275215.1| - 5.7e-05 23.3 25.9 1.7 8.9 0.0 8.2 2 2 7 10 10 10 2 Putative helix-turn-helix protein, YlxM / p13 like ChAPs PF09295.10 gi|15678100|ref|NP_275215.1| - 0.00013 21.1 7.5 0.21 10.5 0.1 4.3 3 2 1 4 4 4 1 ChAPs (Chs5p-Arf1p-binding proteins) BTAD PF03704.17 gi|15678100|ref|NP_275215.1| - 0.00016 22.1 10.7 2.9 8.3 0.0 5.8 1 1 2 5 5 5 1 Bacterial transcriptional activator domain NRBF2_MIT PF17169.4 gi|15678100|ref|NP_275215.1| - 0.00022 21.4 28.6 0.33 11.2 0.1 8.7 4 4 4 9 9 8 2 MIT domain of nuclear receptor-binding factor 2 Glyco_hydro_65m PF03632.15 gi|15678100|ref|NP_275215.1| - 0.0011 17.9 0.0 3.1 6.5 0.0 3.8 3 1 1 4 4 4 1 Glycosyl hydrolase family 65 central catalytic domain TPR_20 PF14561.6 gi|15678100|ref|NP_275215.1| - 0.0012 19.2 11.7 0.24 11.7 0.1 4.9 3 2 1 5 5 5 1 Tetratricopeptide repeat Rapsyn_N PF10579.9 gi|15678100|ref|NP_275215.1| - 0.0026 17.8 8.8 0.21 11.7 0.1 5.6 4 3 0 5 5 5 1 Rapsyn N-terminal myristoylation and linker region PRTase_1 PF11202.8 gi|15678100|ref|NP_275215.1| - 0.0044 16.3 0.1 13 4.9 0.0 4.3 3 1 0 4 4 4 0 Phosphoribosyl transferase (PRTase) MAS20 PF02064.15 gi|15678100|ref|NP_275215.1| - 0.006 16.7 11.8 1.8 8.7 0.0 6.0 4 4 3 7 7 6 1 MAS20 protein import receptor DUF4919 PF16266.5 gi|15678100|ref|NP_275215.1| - 0.0064 16.5 5.6 0.38 10.7 0.2 3.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4919) YnfE PF17452.2 gi|15678100|ref|NP_275215.1| - 0.009 16.3 17.4 4.7 7.6 0.1 7.3 5 3 3 8 8 7 0 Uncharacterized YnfE-like DUF4326 PF14216.6 gi|15678100|ref|NP_275215.1| - 0.009 16.7 11.2 22 5.9 0.0 6.3 1 1 5 6 6 6 0 Domain of unknown function (DUF4326) TPR_4 PF07721.14 gi|15678100|ref|NP_275215.1| - 0.012 16.2 0.0 38 5.3 0.0 5.0 6 0 0 6 6 4 0 Tetratricopeptide repeat PknG_TPR PF16918.5 gi|15678100|ref|NP_275215.1| - 0.059 12.1 0.0 0.47 9.1 0.0 2.3 1 1 1 2 2 2 0 Protein kinase G tetratricopeptide repeat Phage_tail_X PF05489.12 gi|15678100|ref|NP_275215.1| - 0.063 13.0 0.0 7 6.4 0.0 3.0 3 0 0 3 3 2 0 Phage Tail Protein X DUF357 PF04010.13 gi|15678100|ref|NP_275215.1| - 0.07 13.2 4.9 5.9 7.0 0.1 4.8 4 2 2 6 6 5 0 Protein of unknown function (DUF357) Bac_chlorC PF02043.17 gi|15678100|ref|NP_275215.1| - 0.072 13.1 0.0 25 5.0 0.0 3.8 4 0 0 4 4 3 0 Bacteriochlorophyll C binding protein Mqo PF06039.15 gi|15678100|ref|NP_275215.1| - 0.15 10.6 1.5 7.9 4.9 0.1 2.9 3 0 0 3 3 3 0 Malate:quinone oxidoreductase (Mqo) Katanin_con80 PF13925.6 gi|15678100|ref|NP_275215.1| - 0.15 12.1 0.3 6.3 6.8 0.0 2.7 2 0 0 2 2 2 0 con80 domain of Katanin Sda PF08970.10 gi|15678100|ref|NP_275215.1| - 0.21 11.3 36.2 0.8 9.5 0.7 8.9 9 1 0 9 9 9 0 Sporulation inhibitor A BPS PF08947.10 gi|15678100|ref|NP_275215.1| - 0.44 10.4 5.7 23 4.9 0.0 4.2 4 2 0 4 4 3 0 BPS (Between PH and SH2) Pepsin-I3 PF06394.13 gi|15678100|ref|NP_275215.1| - 0.51 10.6 12.2 10 6.4 0.2 5.0 5 1 1 6 6 5 0 Pepsin inhibitor-3-like repeated domain TPR_3 PF07720.12 gi|15678100|ref|NP_275215.1| - 0.64 10.1 23.7 15 5.7 0.1 7.9 9 0 0 9 9 7 0 Tetratricopeptide repeat DUF1385 PF07136.11 gi|15678100|ref|NP_275215.1| - 3 7.1 3.6 35 3.6 0.1 2.9 3 0 0 3 3 2 0 Protein of unknown function (DUF1385) MASE5 PF17178.4 gi|15678102|ref|NP_275217.1| - 0.00025 21.0 5.3 0.0003 20.7 5.3 1.1 1 0 0 1 1 1 1 Membrane-associated sensor EIID-AGA PF03613.14 gi|15678102|ref|NP_275217.1| - 0.64 9.2 4.4 1.1 8.4 4.4 1.5 1 1 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component DUF4131 PF13567.6 gi|15678102|ref|NP_275217.1| - 1.7 8.3 6.4 0.32 10.6 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Pkr1 PF08636.10 gi|15678102|ref|NP_275217.1| - 7.2 6.8 8.8 1.3 9.2 4.9 1.7 1 1 1 2 2 2 0 ER protein Pkr1 PMBR PF09373.10 gi|15678103|ref|NP_275218.1| - 5.5e-26 89.5 2.5 1.9e-08 34.1 0.2 4.6 4 0 0 4 4 4 3 Pseudomurein-binding repeat PKD PF00801.20 gi|15678103|ref|NP_275218.1| - 1.7e-08 34.2 1.2 5e-08 32.7 1.2 1.8 1 0 0 1 1 1 1 PKD domain Calycin_like PF13944.6 gi|15678103|ref|NP_275218.1| - 0.073 13.4 0.8 0.32 11.3 0.8 2.1 1 1 0 1 1 1 0 Calycin-like beta-barrel domain CarboxypepD_reg PF13620.6 gi|15678103|ref|NP_275218.1| - 0.12 12.6 1.4 12 6.2 0.5 3.5 3 0 0 3 3 3 0 Carboxypeptidase regulatory-like domain DUF2723 PF11028.8 gi|15678108|ref|NP_275223.1| - 0.0029 17.5 1.1 0.0042 17.0 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2723) TPR_1 PF00515.28 gi|15678110|ref|NP_275225.1| - 7.8e-10 38.2 0.6 7.8e-10 38.2 0.6 2.0 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678110|ref|NP_275225.1| - 7.3e-09 35.1 2.6 2.3e-08 33.5 0.2 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678110|ref|NP_275225.1| - 8.3e-08 31.9 3.7 1.2e-07 31.4 0.4 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678110|ref|NP_275225.1| - 3.6e-07 29.7 0.1 6.3e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 TPR repeat TPR_7 PF13176.6 gi|15678110|ref|NP_275225.1| - 0.00012 21.8 0.1 0.00021 21.1 0.1 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678110|ref|NP_275225.1| - 0.00012 22.3 0.1 0.00027 21.2 0.0 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678110|ref|NP_275225.1| - 0.00061 20.4 0.0 0.00082 20.0 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|15678110|ref|NP_275225.1| - 0.00073 19.6 0.9 0.001 19.1 0.9 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|15678110|ref|NP_275225.1| - 0.004 17.0 0.0 0.0068 16.2 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678110|ref|NP_275225.1| - 0.0051 17.3 0.0 0.0073 16.8 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678110|ref|NP_275225.1| - 0.0053 17.3 0.5 0.06 14.0 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|15678110|ref|NP_275225.1| - 0.0087 15.3 0.0 0.0088 15.3 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat FAT PF02259.23 gi|15678110|ref|NP_275225.1| - 0.0088 15.3 0.1 0.0088 15.3 0.1 1.0 1 0 0 1 1 1 1 FAT domain TPR_16 PF13432.6 gi|15678110|ref|NP_275225.1| - 0.013 16.1 0.0 0.016 15.9 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15678110|ref|NP_275225.1| - 0.017 15.4 1.1 1.2 9.7 0.1 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat Lipocalin PF00061.23 gi|15678110|ref|NP_275225.1| - 0.042 14.0 0.1 0.044 14.0 0.1 1.0 1 0 0 1 1 1 0 Lipocalin / cytosolic fatty-acid binding protein family TPR_1 PF00515.28 gi|15678111|ref|NP_275226.1| - 1.2e-115 373.0 51.2 2.5e-14 52.4 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678111|ref|NP_275226.1| - 1.2e-97 312.4 41.4 2e-11 43.1 0.2 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678111|ref|NP_275226.1| - 2.7e-84 270.5 38.6 1e-10 41.0 0.6 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678111|ref|NP_275226.1| - 1.3e-82 271.2 39.0 8.2e-12 44.6 0.8 10.1 1 1 9 10 10 10 10 TPR repeat TPR_17 PF13431.6 gi|15678111|ref|NP_275226.1| - 7.1e-69 223.4 36.8 1.3e-08 34.7 0.1 10.6 11 0 0 11 11 10 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15678111|ref|NP_275226.1| - 9.3e-63 208.6 0.0 6.3e-11 42.7 0.0 7.0 2 1 6 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678111|ref|NP_275226.1| - 3.1e-58 194.0 25.8 2.1e-15 56.8 0.2 8.7 1 1 7 8 8 8 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678111|ref|NP_275226.1| - 4.5e-56 182.7 4.1 4.2e-05 24.0 0.0 10.1 1 1 9 10 10 10 10 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15678111|ref|NP_275226.1| - 8.1e-48 160.5 2.1 4.2e-08 33.2 0.0 6.9 2 1 5 8 8 8 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15678111|ref|NP_275226.1| - 2.7e-47 155.4 4.3 5.5e-07 29.2 0.0 10.1 10 0 0 10 10 10 7 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678111|ref|NP_275226.1| - 1.6e-44 150.3 12.1 1.4e-10 41.5 0.1 5.4 4 1 2 6 6 6 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15678111|ref|NP_275226.1| - 3.4e-36 122.1 17.4 5.9e-05 22.8 0.2 10.1 10 0 0 10 10 10 6 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678111|ref|NP_275226.1| - 3.2e-30 102.7 9.8 0.076 13.7 0.0 10.1 10 0 0 10 10 10 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15678111|ref|NP_275226.1| - 3.9e-25 87.9 42.3 1e-07 32.0 2.4 4.7 1 1 5 6 6 6 5 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|15678111|ref|NP_275226.1| - 2e-20 73.2 5.9 4.9e-05 22.5 0.0 5.8 1 1 5 7 7 7 6 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|15678111|ref|NP_275226.1| - 8.7e-19 67.4 24.2 0.055 13.5 0.1 9.9 8 2 1 10 10 10 4 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 gi|15678111|ref|NP_275226.1| - 9.8e-18 64.0 31.5 0.33 11.0 0.1 9.5 7 3 2 9 9 9 7 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|15678111|ref|NP_275226.1| - 7.7e-16 58.5 5.7 0.027 14.5 0.0 7.6 1 1 8 9 9 9 5 Domain of Unknown Function (DUF3856) TPR_15 PF13429.6 gi|15678111|ref|NP_275226.1| - 1.5e-15 57.2 6.7 2.3e-05 23.8 0.2 5.8 1 1 5 6 6 6 4 Tetratricopeptide repeat FAT PF02259.23 gi|15678111|ref|NP_275226.1| - 5.8e-13 48.8 16.3 2e-05 24.0 0.5 6.5 1 1 5 6 6 6 4 FAT domain SRP_TPR_like PF17004.5 gi|15678111|ref|NP_275226.1| - 1.2e-11 44.6 14.7 0.00025 21.1 1.8 5.7 1 1 5 6 6 6 4 Putative TPR-like repeat DUF5113 PF17140.4 gi|15678111|ref|NP_275226.1| - 8.8e-11 41.9 12.0 1.4 8.7 0.1 8.0 2 2 6 9 9 9 1 Domain of unknown function (DUF5113) BTAD PF03704.17 gi|15678111|ref|NP_275226.1| - 2.8e-10 40.8 4.5 0.03 14.8 0.0 4.5 3 1 1 4 4 4 3 Bacterial transcriptional activator domain TPR_4 PF07721.14 gi|15678111|ref|NP_275226.1| - 2.9e-09 36.7 0.0 1.5 9.7 0.0 5.7 7 0 0 7 7 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|15678111|ref|NP_275226.1| - 5.5e-09 35.9 8.4 0.04 13.3 0.1 5.1 1 1 4 5 5 5 3 Coatomer epsilon subunit SHNi-TPR PF10516.9 gi|15678111|ref|NP_275226.1| - 1.9e-08 33.6 15.0 0.042 13.3 0.0 7.5 8 0 0 8 8 7 1 SHNi-TPR Phage_tail_X PF05489.12 gi|15678111|ref|NP_275226.1| - 2.3e-07 30.4 0.0 12 5.7 0.0 6.5 6 1 1 7 7 7 0 Phage Tail Protein X NRBF2_MIT PF17169.4 gi|15678111|ref|NP_275226.1| - 1.4e-06 28.4 17.8 2.4 8.4 0.0 8.5 4 2 5 9 9 9 1 MIT domain of nuclear receptor-binding factor 2 Rapsyn_N PF10579.9 gi|15678111|ref|NP_275226.1| - 1.6e-06 28.1 2.8 0.72 10.0 0.0 5.6 3 2 3 6 6 6 1 Rapsyn N-terminal myristoylation and linker region PPR PF01535.20 gi|15678111|ref|NP_275226.1| - 2.3e-06 27.5 18.8 11 6.5 0.1 9.4 10 0 0 10 10 10 0 PPR repeat TPR_21 PF09976.9 gi|15678111|ref|NP_275226.1| - 2.4e-06 27.4 4.0 0.28 10.9 0.2 5.5 1 1 5 6 6 6 1 Tetratricopeptide repeat-like domain EST1_DNA_bind PF10373.9 gi|15678111|ref|NP_275226.1| - 3.3e-06 26.8 0.5 1.2 8.6 0.0 6.0 5 2 2 7 7 7 1 Est1 DNA/RNA binding domain HTH_Bact PF18768.1 gi|15678111|ref|NP_275226.1| - 5.4e-06 25.9 13.2 15 5.3 0.0 8.4 10 0 0 10 10 8 0 Helix-turn-helix bacterial domain RPN7 PF10602.9 gi|15678111|ref|NP_275226.1| - 8.3e-06 25.6 10.1 0.94 9.2 0.1 6.2 2 2 3 5 5 5 1 26S proteasome subunit RPN7 SNAP PF14938.6 gi|15678111|ref|NP_275226.1| - 3.4e-05 23.4 12.2 0.021 14.2 1.8 4.9 1 1 3 4 4 4 4 Soluble NSF attachment protein, SNAP TPR_20 PF14561.6 gi|15678111|ref|NP_275226.1| - 4.7e-05 23.7 3.1 0.22 11.9 0.1 4.7 1 1 5 6 6 6 1 Tetratricopeptide repeat APP_E2 PF12925.7 gi|15678111|ref|NP_275226.1| - 4.8e-05 23.2 16.4 0.59 9.8 0.5 6.7 1 1 5 7 7 7 2 E2 domain of amyloid precursor protein SAICAR_synt PF01259.18 gi|15678111|ref|NP_275226.1| - 7.4e-05 22.5 0.2 0.57 9.7 0.0 4.1 1 1 3 5 5 5 1 SAICAR synthetase Alkyl_sulf_dimr PF14863.6 gi|15678111|ref|NP_275226.1| - 7.4e-05 23.2 2.2 46 4.5 0.1 5.6 1 1 2 4 4 4 0 Alkyl sulfatase dimerisation Sel1 PF08238.12 gi|15678111|ref|NP_275226.1| - 9.3e-05 23.0 17.0 2.7 8.8 0.1 8.2 7 1 0 8 8 8 1 Sel1 repeat ChAPs PF09295.10 gi|15678111|ref|NP_275226.1| - 0.00013 21.2 1.9 1.8 7.5 0.0 3.6 1 1 1 3 3 3 1 ChAPs (Chs5p-Arf1p-binding proteins) Wzy_C_2 PF11846.8 gi|15678111|ref|NP_275226.1| - 0.00068 19.6 1.2 3.9 7.3 0.0 4.2 1 1 5 6 6 6 0 Virulence factor membrane-bound polymerase, C-terminal TPR_3 PF07720.12 gi|15678111|ref|NP_275226.1| - 0.002 18.1 14.2 9.7 6.3 0.0 7.3 7 0 0 7 7 7 0 Tetratricopeptide repeat MAS20 PF02064.15 gi|15678111|ref|NP_275226.1| - 0.002 18.2 7.4 2 8.5 0.0 6.2 6 2 2 8 8 7 1 MAS20 protein import receptor DUF4919 PF16266.5 gi|15678111|ref|NP_275226.1| - 0.0022 18.0 3.6 1.3 9.0 0.2 4.1 2 2 2 4 4 4 1 Domain of unknown function (DUF4919) Rota_NSP3 PF01665.16 gi|15678111|ref|NP_275226.1| - 0.0054 15.9 1.9 16 4.5 0.0 4.6 2 2 4 6 6 6 0 Rotavirus non-structural protein NSP3 PknG_TPR PF16918.5 gi|15678111|ref|NP_275226.1| - 0.019 13.7 0.1 0.17 10.6 0.0 2.2 1 1 2 3 3 3 0 Protein kinase G tetratricopeptide repeat DUF5588 PF17826.1 gi|15678111|ref|NP_275226.1| - 0.045 12.6 0.1 0.75 8.6 0.0 2.7 1 1 0 2 2 2 0 Family of unknown function (DUF5588) DUF627 PF04781.12 gi|15678111|ref|NP_275226.1| - 0.048 13.7 5.1 26 4.9 0.1 5.7 2 2 5 7 7 5 0 Protein of unknown function (DUF627) Katanin_con80 PF13925.6 gi|15678111|ref|NP_275226.1| - 0.055 13.5 0.1 5.7 7.0 0.0 3.1 2 1 1 3 3 3 0 con80 domain of Katanin DUF1925 PF09094.11 gi|15678111|ref|NP_275226.1| - 0.077 13.3 0.1 56 4.2 0.0 4.8 5 2 2 7 7 3 0 Domain of unknown function (DUF1925) PPTA PF01239.22 gi|15678111|ref|NP_275226.1| - 0.11 12.3 11.2 0.63 9.9 0.0 5.0 6 0 0 6 6 4 0 Protein prenyltransferase alpha subunit repeat DUF4326 PF14216.6 gi|15678111|ref|NP_275226.1| - 0.14 12.9 4.2 29 5.5 0.1 4.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4326) Sda PF08970.10 gi|15678111|ref|NP_275226.1| - 0.2 11.5 22.4 25 4.7 0.4 8.0 8 0 0 8 8 8 0 Sporulation inhibitor A PRTase_1 PF11202.8 gi|15678111|ref|NP_275226.1| - 0.31 10.3 0.6 14 4.9 0.0 3.5 2 2 1 4 4 4 0 Phosphoribosyl transferase (PRTase) Pepsin-I3 PF06394.13 gi|15678111|ref|NP_275226.1| - 3.8 7.8 10.3 1.2e+02 2.9 0.0 5.7 8 0 0 8 8 4 0 Pepsin inhibitor-3-like repeated domain DUF4327 PF14217.6 gi|15678112|ref|NP_275227.1| - 0.0029 17.7 0.0 0.32 11.2 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4327) CoA_binding_3 PF13727.6 gi|15678114|ref|NP_275229.1| - 0.01 15.9 5.4 1.1 9.2 0.9 2.1 2 0 0 2 2 2 2 CoA-binding domain PMBR PF09373.10 gi|15678115|ref|NP_275230.1| - 5.2e-26 89.5 2.5 1.9e-08 34.0 0.2 4.7 4 0 0 4 4 4 3 Pseudomurein-binding repeat PKD PF00801.20 gi|15678115|ref|NP_275230.1| - 1.8e-08 34.1 1.2 5e-08 32.7 1.2 1.8 1 0 0 1 1 1 1 PKD domain Calycin_like PF13944.6 gi|15678115|ref|NP_275230.1| - 0.075 13.3 0.8 0.32 11.3 0.8 2.1 1 1 0 1 1 1 0 Calycin-like beta-barrel domain CarboxypepD_reg PF13620.6 gi|15678115|ref|NP_275230.1| - 0.12 12.7 1.4 12 6.2 0.5 3.5 3 0 0 3 3 3 0 Carboxypeptidase regulatory-like domain KTSC PF13619.6 gi|15678116|ref|NP_275231.1| - 0.023 14.5 0.0 0.023 14.5 0.0 1.0 1 0 0 1 1 1 0 KTSC domain UPF0370 PF13980.6 gi|15678117|ref|NP_275232.1| - 0.088 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0370) EpsG PF14897.6 gi|15678118|ref|NP_275233.1| - 0.11 11.8 21.2 0.07 12.4 19.9 1.3 1 1 0 1 1 1 0 EpsG family DUF2270 PF10028.9 gi|15678118|ref|NP_275233.1| - 0.89 9.1 7.1 0.57 9.7 1.5 2.3 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2270) MAPEG PF01124.18 gi|15678118|ref|NP_275233.1| - 1.6 8.7 9.8 3.5 7.6 9.8 1.8 1 1 0 1 1 1 0 MAPEG family Presenilin PF01080.17 gi|15678118|ref|NP_275233.1| - 7.9 5.1 11.7 10 4.8 11.7 1.1 1 0 0 1 1 1 0 Presenilin UPF0542 PF15086.6 gi|15678120|ref|NP_275235.1| - 0.68 9.9 3.3 3.9 7.5 3.3 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0542 PRA1 PF03208.19 gi|15678121|ref|NP_275236.1| - 0.0012 18.4 7.4 0.0015 18.2 7.4 1.1 1 0 0 1 1 1 1 PRA1 family protein KbaA PF14089.6 gi|15678121|ref|NP_275236.1| - 0.031 14.1 7.2 0.036 13.9 7.2 1.0 1 0 0 1 1 1 0 KinB-signalling pathway activation in sporulation Bacteriocin_IIc PF10439.9 gi|15678122|ref|NP_275237.1| - 0.099 12.8 2.1 0.31 11.2 2.1 1.7 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide DUF2842 PF11003.8 gi|15678123|ref|NP_275238.1| - 0.75 10.1 7.4 5.2 7.4 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2842) DUF2070 PF09843.9 gi|15678123|ref|NP_275238.1| - 3 6.0 9.7 3.5 5.8 9.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Peptidase_C39 PF03412.15 gi|15678124|ref|NP_275239.1| - 6.9e-17 61.5 0.0 1e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase C39 family Peptidase_C39 PF03412.15 gi|15678125|ref|NP_275240.1| - 0.017 14.9 0.0 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 Peptidase C39 family DUF3335 PF11814.8 gi|15678125|ref|NP_275240.1| - 0.13 11.7 0.1 0.19 11.2 0.1 1.2 1 0 0 1 1 1 0 Peptidase_C39 like family DUF2769 PF10967.8 gi|15678128|ref|NP_275243.1| - 2e-07 31.6 9.1 2.4e-05 24.9 9.7 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2769) DUF2193 PF09959.9 gi|15678129|ref|NP_275244.1| - 6.5e-281 932.0 5.5 7.3e-281 931.8 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2193) DUF2180 PF09947.9 gi|15678130|ref|NP_275245.1| - 4.8e-36 122.6 5.1 5.7e-36 122.3 5.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.6 gi|15678130|ref|NP_275245.1| - 0.024 15.4 1.0 0.024 15.4 1.0 1.9 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-UBP_var PF17807.1 gi|15678130|ref|NP_275245.1| - 0.48 10.2 6.6 0.076 12.8 2.2 1.8 2 0 0 2 2 2 0 Variant UBP zinc finger Prok-RING_1 PF14446.6 gi|15678130|ref|NP_275245.1| - 4.1 7.4 10.4 6.4 6.8 7.0 2.5 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 MIP PF00230.20 gi|15678131|ref|NP_275246.1| - 7e-50 169.8 18.9 8e-50 169.7 18.9 1.0 1 0 0 1 1 1 1 Major intrinsic protein MFS_1 PF07690.16 gi|15678132|ref|NP_275247.1| - 2.5e-54 184.6 57.0 1.9e-40 138.9 28.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15678132|ref|NP_275247.1| - 2.8e-19 69.3 29.6 2.1e-14 53.2 12.4 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|15678132|ref|NP_275247.1| - 3.2e-08 32.9 18.3 3.2e-05 23.0 5.4 2.2 2 0 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 gi|15678132|ref|NP_275247.1| - 1.2e-06 27.4 29.0 1e-05 24.3 0.5 3.8 3 1 1 4 4 4 2 MFS/sugar transport protein TRI12 PF06609.13 gi|15678132|ref|NP_275247.1| - 0.00015 20.4 13.6 0.001 17.6 4.7 2.3 2 0 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) TCR_zetazeta PF11628.8 gi|15678132|ref|NP_275247.1| - 0.23 11.2 3.6 0.79 9.4 3.6 1.9 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain Glu_synthase PF01645.17 gi|15678133|ref|NP_275248.1| - 3.6e-132 441.0 2.2 3.6e-132 441.0 2.2 2.0 2 1 0 2 2 1 1 Conserved region in glutamate synthase Fer4 PF00037.27 gi|15678133|ref|NP_275248.1| - 1.7e-15 56.0 67.3 1.8e-07 30.7 2.3 7.6 8 1 0 8 8 7 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678133|ref|NP_275248.1| - 5.6e-13 49.3 52.8 6.9e-07 29.8 11.1 5.4 3 2 1 4 4 4 4 4Fe-4S dicluster domain FMN_dh PF01070.18 gi|15678133|ref|NP_275248.1| - 2.3e-12 46.6 4.3 2.3e-12 46.6 4.3 2.4 3 0 0 3 3 3 1 FMN-dependent dehydrogenase Fer4_10 PF13237.6 gi|15678133|ref|NP_275248.1| - 4.5e-11 42.7 55.8 1.2e-05 25.3 12.1 4.7 4 1 1 5 5 5 5 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678133|ref|NP_275248.1| - 4.5e-11 42.7 57.5 1.9e-05 24.7 10.0 5.7 4 2 2 6 6 6 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678133|ref|NP_275248.1| - 3.5e-10 39.9 57.7 1.3e-05 25.3 11.6 5.6 2 1 5 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678133|ref|NP_275248.1| - 9.6e-09 35.0 67.2 4.2e-05 23.4 1.2 7.0 7 0 0 7 7 6 4 4Fe-4S binding domain NMO PF03060.15 gi|15678133|ref|NP_275248.1| - 1.4e-08 34.5 4.7 2.3e-08 33.8 4.7 1.4 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 gi|15678133|ref|NP_275248.1| - 2.7e-07 29.9 5.3 2.7e-07 29.9 5.3 2.1 3 0 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain Fer4_8 PF13183.6 gi|15678133|ref|NP_275248.1| - 9.5e-07 29.2 40.5 0.0045 17.4 0.1 5.6 4 2 0 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678133|ref|NP_275248.1| - 4.2e-05 24.0 40.6 0.39 11.3 0.3 6.5 4 1 1 5 5 5 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678133|ref|NP_275248.1| - 6.5e-05 22.8 19.1 0.00071 19.5 2.1 6.7 7 0 0 7 7 5 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678133|ref|NP_275248.1| - 8e-05 23.5 50.3 0.053 14.5 3.8 6.8 4 1 3 7 7 7 4 4Fe-4S double cluster binding domain DHO_dh PF01180.21 gi|15678133|ref|NP_275248.1| - 0.0017 17.6 1.9 0.005 16.1 1.9 1.8 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase ThiG PF05690.14 gi|15678133|ref|NP_275248.1| - 0.0026 17.1 3.3 0.019 14.3 0.6 2.7 3 0 0 3 3 3 1 Thiazole biosynthesis protein ThiG Fer4_15 PF13459.6 gi|15678133|ref|NP_275248.1| - 0.003 18.2 28.3 0.035 14.8 0.5 5.4 4 0 0 4 4 4 3 4Fe-4S single cluster domain His_biosynth PF00977.21 gi|15678133|ref|NP_275248.1| - 0.0066 15.9 0.4 0.017 14.6 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein Fer4_4 PF12800.7 gi|15678133|ref|NP_275248.1| - 0.011 16.2 63.2 0.024 15.1 1.4 7.5 6 2 1 7 7 6 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15678133|ref|NP_275248.1| - 0.014 15.6 10.6 0.014 15.6 10.6 5.1 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678133|ref|NP_275248.1| - 0.046 14.7 3.8 0.046 14.7 3.8 7.6 7 1 0 7 7 6 0 4Fe-4S binding domain Glu_syn_central PF04898.14 gi|15678133|ref|NP_275248.1| - 0.12 11.8 0.5 2.1 7.8 0.1 2.3 2 0 0 2 2 2 0 Glutamate synthase central domain PcrB PF01884.17 gi|15678133|ref|NP_275248.1| - 0.31 10.5 3.1 2.9 7.3 1.1 2.4 1 1 2 3 3 3 0 PcrB family ETF_QO PF05187.13 gi|15678133|ref|NP_275248.1| - 3.4 7.8 14.0 2.8 8.1 1.0 3.2 2 1 1 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S GXGXG PF01493.19 gi|15678134|ref|NP_275249.1| - 9.6e-21 74.2 9.8 1.5e-20 73.6 9.8 1.3 1 0 0 1 1 1 1 GXGXG motif HTH_5 PF01022.20 gi|15678135|ref|NP_275250.1| - 1.9e-09 37.2 0.6 2.9e-09 36.7 0.6 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|15678135|ref|NP_275250.1| - 1.2e-07 31.5 0.1 3.9e-07 29.8 0.1 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15678135|ref|NP_275250.1| - 3.1e-07 29.8 0.7 5e-07 29.2 0.1 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|15678135|ref|NP_275250.1| - 9.1e-05 22.2 0.2 0.00018 21.2 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|15678135|ref|NP_275250.1| - 0.0011 18.9 0.1 0.0022 18.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|15678135|ref|NP_275250.1| - 0.0012 18.8 0.1 0.002 18.0 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|15678135|ref|NP_275250.1| - 0.0013 18.7 0.1 0.0023 17.8 0.1 1.4 1 0 0 1 1 1 1 HTH domain FUR PF01475.19 gi|15678135|ref|NP_275250.1| - 0.0032 17.6 0.0 0.037 14.2 0.0 2.1 2 0 0 2 2 2 1 Ferric uptake regulator family MarR_2 PF12802.7 gi|15678135|ref|NP_275250.1| - 0.022 14.7 0.3 0.13 12.2 0.0 2.3 3 0 0 3 3 2 0 MarR family RP-C PF03428.13 gi|15678135|ref|NP_275250.1| - 0.032 13.9 0.2 0.064 12.9 0.0 1.5 2 0 0 2 2 2 0 Replication protein C N-terminal domain Rio2_N PF09202.11 gi|15678135|ref|NP_275250.1| - 0.061 13.5 0.1 0.17 12.1 0.1 1.7 1 0 0 1 1 1 0 Rio2, N-terminal MarR PF01047.22 gi|15678135|ref|NP_275250.1| - 0.073 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 MarR family DUF2250 PF10007.9 gi|15678135|ref|NP_275250.1| - 0.094 12.8 0.2 0.32 11.1 0.2 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_28 PF13518.6 gi|15678135|ref|NP_275250.1| - 0.14 12.3 0.4 0.29 11.3 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|15678135|ref|NP_275250.1| - 0.16 12.1 0.0 0.39 10.9 0.0 1.6 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC PGP_phosphatase PF09419.10 gi|15678136|ref|NP_275251.1| - 0.018 14.7 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase AHJR-like PF18743.1 gi|15678137|ref|NP_275252.1| - 0.014 14.9 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 REase_AHJR-like ARS2 PF04959.13 gi|15678137|ref|NP_275252.1| - 0.17 12.3 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Arsenite-resistance protein 2 ApbA PF02558.16 gi|15678137|ref|NP_275252.1| - 0.23 11.1 0.0 0.3 10.7 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA OAD_gamma PF04277.13 gi|15678138|ref|NP_275253.1| - 0.4 11.3 0.8 0.56 10.8 0.8 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Zn_dep_PLPC PF00882.18 gi|15678139|ref|NP_275254.1| - 1.6e-12 47.8 0.6 1.7e-12 47.7 0.6 1.1 1 0 0 1 1 1 1 Zinc dependent phospholipase C VIT1 PF01988.19 gi|15678140|ref|NP_275255.1| - 0.00049 20.0 14.4 0.0055 16.6 2.0 2.1 1 1 1 2 2 2 2 VIT family DUF2254 PF10011.9 gi|15678140|ref|NP_275255.1| - 0.16 10.8 3.7 0.24 10.2 3.7 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) CPBP PF02517.16 gi|15678140|ref|NP_275255.1| - 1.4 9.3 8.2 3.5 8.1 8.2 2.1 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease Fer4_7 PF12838.7 gi|15678141|ref|NP_275256.1| - 0.039 14.5 0.8 0.061 13.9 0.8 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Ploopntkinase3 PF18751.1 gi|15678141|ref|NP_275256.1| - 0.15 11.9 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Radical_SAM PF04055.21 gi|15678142|ref|NP_275257.1| - 8.3e-13 49.1 0.0 1.2e-12 48.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|15678142|ref|NP_275257.1| - 0.058 13.5 0.0 0.098 12.8 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|15678142|ref|NP_275257.1| - 0.07 13.4 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain SOUL PF04832.12 gi|15678143|ref|NP_275258.1| - 5.7e-44 150.3 0.1 3.1e-43 147.8 0.1 1.8 1 1 0 1 1 1 1 SOUL heme-binding protein Nitroreductase PF00881.24 gi|15678144|ref|NP_275259.1| - 1.7e-25 90.0 0.0 2.1e-25 89.7 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|15678144|ref|NP_275259.1| - 0.0023 17.5 0.1 2.1 7.9 0.0 2.3 2 0 0 2 2 2 2 Putative TM nitroreductase PMBR PF09373.10 gi|15678145|ref|NP_275260.1| - 1.3e-15 56.7 4.2 1.8e-08 34.2 0.6 2.8 2 0 0 2 2 2 2 Pseudomurein-binding repeat zinc_ribbon_2 PF13240.6 gi|15678146|ref|NP_275261.1| - 0.0018 17.9 2.5 0.003 17.2 2.5 1.4 1 1 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15678146|ref|NP_275261.1| - 0.0027 17.0 4.3 0.004 16.5 4.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain Prok-RING_1 PF14446.6 gi|15678146|ref|NP_275261.1| - 0.0033 17.3 2.3 0.0048 16.8 2.3 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 DZR PF12773.7 gi|15678146|ref|NP_275261.1| - 0.0052 16.8 0.4 0.006 16.6 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|15678146|ref|NP_275261.1| - 0.0095 15.9 0.1 0.01 15.9 0.1 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 gi|15678146|ref|NP_275261.1| - 0.012 15.6 1.3 0.019 15.0 1.3 1.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Cys_rich_CPXG PF14255.6 gi|15678146|ref|NP_275261.1| - 0.026 14.4 0.8 0.17 11.8 0.1 2.0 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-CCCH_6 PF18585.1 gi|15678146|ref|NP_275261.1| - 0.075 12.9 0.4 0.084 12.8 0.4 1.3 1 1 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 zf-RanBP PF00641.18 gi|15678146|ref|NP_275261.1| - 0.079 12.3 3.3 1.1 8.6 0.4 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others TF_Zn_Ribbon PF08271.12 gi|15678146|ref|NP_275261.1| - 0.084 12.4 2.7 0.23 11.0 2.7 1.7 1 1 0 1 1 1 0 TFIIB zinc-binding zf-C3HC4_2 PF13923.6 gi|15678146|ref|NP_275261.1| - 0.15 11.9 3.6 0.22 11.4 3.6 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF35_N PF12172.8 gi|15678146|ref|NP_275261.1| - 0.29 11.1 3.0 0.58 10.1 3.0 1.6 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|15678146|ref|NP_275261.1| - 0.93 9.7 4.5 4.3 7.5 4.5 1.9 1 1 0 1 1 1 0 Zinc ribbon domain HisG PF01634.18 gi|15678147|ref|NP_275262.1| - 3.2e-39 134.5 0.0 4.1e-39 134.1 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|15678147|ref|NP_275262.1| - 3.6e-05 23.8 0.0 6.6e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain Nitroreductase PF00881.24 gi|15678148|ref|NP_275263.1| - 5.9e-28 98.0 0.0 3.4e-14 53.3 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|15678148|ref|NP_275263.1| - 1.1e-12 48.1 0.0 0.00014 21.5 0.2 3.1 1 1 2 3 3 3 3 Putative TM nitroreductase zf-ribbon_3 PF13248.6 gi|15678149|ref|NP_275264.1| - 0.00016 21.0 2.1 0.079 12.4 0.2 2.5 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15678149|ref|NP_275264.1| - 0.00043 19.7 5.6 0.013 15.0 0.3 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding UPF0547 PF10571.9 gi|15678149|ref|NP_275264.1| - 0.0034 17.4 7.9 0.022 14.8 0.3 2.5 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zf-FPG_IleRS PF06827.14 gi|15678149|ref|NP_275264.1| - 0.0089 15.9 2.7 0.33 10.8 0.4 2.4 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS Zn-ribbon_8 PF09723.10 gi|15678149|ref|NP_275264.1| - 0.016 15.3 5.3 0.68 10.1 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|15678149|ref|NP_275264.1| - 0.019 14.9 3.5 0.071 13.0 0.2 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|15678149|ref|NP_275264.1| - 0.025 14.3 0.5 0.63 9.9 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|15678149|ref|NP_275264.1| - 0.032 14.1 4.0 0.19 11.7 0.7 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Mu-like_Com PF10122.9 gi|15678149|ref|NP_275264.1| - 0.051 13.0 1.3 1.5 8.4 0.2 2.2 2 0 0 2 2 2 0 Mu-like prophage protein Com Lar_restr_allev PF14354.6 gi|15678149|ref|NP_275264.1| - 0.065 13.6 4.4 0.12 12.8 4.4 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|15678149|ref|NP_275264.1| - 0.12 12.2 5.7 1.7 8.5 0.1 2.7 3 0 0 3 3 3 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15678149|ref|NP_275264.1| - 0.26 11.3 4.5 2.4 8.1 0.1 2.3 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf_UBZ PF18439.1 gi|15678149|ref|NP_275264.1| - 0.26 10.9 2.8 14 5.4 0.4 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 gi|15678149|ref|NP_275264.1| - 5.1 7.8 5.7 21 5.8 1.4 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type NUDIX PF00293.28 gi|15678150|ref|NP_275265.1| - 3.9e-21 75.5 0.2 4.7e-21 75.2 0.2 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|15678150|ref|NP_275265.1| - 2.1e-06 27.7 0.0 2.9e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain HisKA_2 PF07568.12 gi|15678151|ref|NP_275266.1| - 4.6e-26 90.7 0.5 1e-25 89.6 0.5 1.6 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.26 gi|15678151|ref|NP_275266.1| - 1.1e-09 38.8 0.0 2.2e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|15678151|ref|NP_275266.1| - 9.9e-07 28.8 0.0 2.2e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|15678151|ref|NP_275266.1| - 1.4e-05 25.7 0.1 3.3e-05 24.5 0.1 1.7 1 0 0 1 1 1 1 HWE histidine kinase B12-binding PF02310.19 gi|15678152|ref|NP_275267.1| - 1.8e-22 79.6 0.0 3.2e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|15678152|ref|NP_275267.1| - 2.9e-14 53.2 0.5 5.1e-13 49.3 0.0 2.6 2 0 0 2 2 2 1 B12 binding domain Phycobilisome PF00502.19 gi|15678152|ref|NP_275267.1| - 0.0051 16.7 0.0 0.0094 15.9 0.0 1.4 1 0 0 1 1 1 1 Phycobilisome protein TSNR_N PF04705.12 gi|15678152|ref|NP_275267.1| - 0.0067 16.5 0.1 0.018 15.1 0.1 1.6 1 1 0 1 1 1 1 Thiostrepton-resistance methylase, N terminus HrcA_DNA-bdg PF03444.15 gi|15678154|ref|NP_275269.1| - 3.7e-38 129.0 0.5 3.7e-38 129.0 0.5 1.9 3 0 0 3 3 3 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|15678154|ref|NP_275269.1| - 1.1e-28 99.5 6.2 3.8e-16 59.3 0.9 2.9 3 0 0 3 3 3 2 CBS domain Rrf2 PF02082.20 gi|15678154|ref|NP_275269.1| - 1.8e-08 34.6 0.1 4.2e-08 33.4 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|15678154|ref|NP_275269.1| - 7.2e-07 29.1 0.1 2e-06 27.6 0.1 1.8 1 0 0 1 1 1 1 HTH domain HTH_38 PF13936.6 gi|15678154|ref|NP_275269.1| - 0.0019 17.9 0.1 0.011 15.5 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|15678154|ref|NP_275269.1| - 0.031 14.2 0.1 0.54 10.2 0.0 2.6 3 0 0 3 3 3 0 MarR family HTH_24 PF13412.6 gi|15678154|ref|NP_275269.1| - 0.032 13.8 1.2 0.37 10.4 0.5 2.8 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|15678154|ref|NP_275269.1| - 0.075 12.9 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|15678154|ref|NP_275269.1| - 0.17 11.8 0.0 0.48 10.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DS PF01916.17 gi|15678155|ref|NP_275270.1| - 6.4e-88 294.7 0.0 7.2e-88 294.6 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase OMPdecase PF00215.24 gi|15678157|ref|NP_275272.1| - 4.7e-43 147.4 0.0 7e-43 146.8 0.0 1.2 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|15678157|ref|NP_275272.1| - 0.076 12.5 0.0 8.3 5.8 0.0 2.4 2 1 0 3 3 3 0 PcrB family CbiM PF01891.16 gi|15678158|ref|NP_275273.1| - 3.7e-56 190.2 15.5 4.2e-56 190.1 15.5 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region CbiN PF02553.15 gi|15678159|ref|NP_275274.1| - 1.5e-25 89.0 0.0 1.7e-25 88.8 0.0 1.0 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiQ PF02361.16 gi|15678160|ref|NP_275275.1| - 2e-62 210.7 7.6 2.5e-62 210.3 7.6 1.1 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|15678161|ref|NP_275276.1| - 4.1e-32 111.6 0.0 6.9e-32 110.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15678161|ref|NP_275276.1| - 3.7e-13 50.0 0.5 3e-08 33.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15678161|ref|NP_275276.1| - 1.9e-07 30.7 0.0 8.9e-07 28.6 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15678161|ref|NP_275276.1| - 0.0018 18.1 0.0 0.48 10.1 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|15678161|ref|NP_275276.1| - 0.0018 17.9 0.0 0.0037 17.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15678161|ref|NP_275276.1| - 0.0054 17.3 0.0 0.0093 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|15678161|ref|NP_275276.1| - 0.0072 16.1 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_25 PF13481.6 gi|15678161|ref|NP_275276.1| - 0.033 13.7 0.0 0.11 12.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|15678161|ref|NP_275276.1| - 0.037 12.7 0.0 0.98 8.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|15678161|ref|NP_275276.1| - 0.039 14.3 0.0 0.058 13.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|15678161|ref|NP_275276.1| - 0.04 13.8 0.0 0.1 12.5 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase SbcCD_C PF13558.6 gi|15678161|ref|NP_275276.1| - 0.075 13.3 0.0 0.42 10.9 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MeaB PF03308.16 gi|15678161|ref|NP_275276.1| - 0.11 11.4 0.0 0.19 10.7 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_27 PF13514.6 gi|15678161|ref|NP_275276.1| - 0.23 11.0 0.0 0.43 10.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|15678161|ref|NP_275276.1| - 0.25 11.0 0.2 0.45 10.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain DMRL_synthase PF00885.19 gi|15678162|ref|NP_275277.1| - 9.5e-17 61.1 0.1 1.1e-16 60.9 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase FMN_red PF03358.15 gi|15678163|ref|NP_275278.1| - 7.2e-38 129.8 0.0 8.6e-38 129.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|15678163|ref|NP_275278.1| - 6e-09 35.9 0.0 7.7e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Glycos_transf_2 PF00535.26 gi|15678164|ref|NP_275279.1| - 1e-38 132.8 0.0 1.2e-38 132.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678164|ref|NP_275279.1| - 7e-08 32.6 0.0 8.7e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15678164|ref|NP_275279.1| - 0.034 13.6 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF2304 PF10066.9 gi|15678165|ref|NP_275280.1| - 5.3e-28 97.3 1.1 5.9e-28 97.2 1.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) MPS-4 PF17523.2 gi|15678165|ref|NP_275280.1| - 1.6 8.9 4.5 9.2 6.5 0.3 2.3 2 0 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Glycos_transf_1 PF00534.20 gi|15678166|ref|NP_275281.1| - 3.1e-37 127.7 0.0 5.5e-37 126.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678166|ref|NP_275281.1| - 4.7e-28 98.3 0.0 1.2e-27 97.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678166|ref|NP_275281.1| - 1.5e-16 60.9 0.1 2.2e-16 60.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678166|ref|NP_275281.1| - 2.3e-08 34.7 0.0 4.1e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678166|ref|NP_275281.1| - 7.3e-07 29.5 0.0 6.4e-06 26.5 0.0 2.5 3 0 0 3 3 3 1 Glycosyl transferases group 1 CCG PF02754.16 gi|15678167|ref|NP_275282.1| - 1.2e-08 35.1 0.5 4.2e-07 30.1 0.1 2.4 2 0 0 2 2 2 2 Cysteine-rich domain LUD_dom PF02589.15 gi|15678168|ref|NP_275283.1| - 1.2e-41 142.5 0.4 2.5e-41 141.5 0.4 1.5 1 1 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 gi|15678168|ref|NP_275283.1| - 1.3e-11 44.7 1.7 3.2e-11 43.5 1.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678168|ref|NP_275283.1| - 5.9e-10 39.1 2.7 1.1e-09 38.2 2.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678168|ref|NP_275283.1| - 4e-08 33.7 1.8 1.2e-07 32.1 1.6 1.9 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678168|ref|NP_275283.1| - 1.5e-07 31.5 1.5 4.8e-07 29.8 1.6 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678168|ref|NP_275283.1| - 4.1e-07 30.5 3.7 9.9e-07 29.3 3.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678168|ref|NP_275283.1| - 1.6e-06 27.7 15.5 0.0018 18.0 3.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15678168|ref|NP_275283.1| - 5.7e-05 23.2 6.4 0.026 14.6 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678168|ref|NP_275283.1| - 6.1e-05 23.2 9.9 0.0033 17.8 1.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678168|ref|NP_275283.1| - 9.1e-05 22.3 12.1 0.015 15.3 2.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15678168|ref|NP_275283.1| - 0.0029 18.4 16.8 0.18 12.8 4.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15678168|ref|NP_275283.1| - 0.0029 18.4 5.6 0.35 11.7 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678168|ref|NP_275283.1| - 0.0049 16.9 14.3 0.026 14.6 2.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678168|ref|NP_275283.1| - 0.0051 17.7 8.9 0.33 11.9 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|15678168|ref|NP_275283.1| - 0.029 14.6 2.0 5.9 7.1 0.1 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15678168|ref|NP_275283.1| - 0.083 12.7 2.5 2.7 7.8 0.1 2.4 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_15 PF13459.6 gi|15678168|ref|NP_275283.1| - 2.2 9.1 7.4 7.8 7.3 0.1 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain 4HFCP_synth PF04476.13 gi|15678169|ref|NP_275284.1| - 3.7e-89 298.4 0.3 4.2e-89 298.2 0.3 1.0 1 0 0 1 1 1 1 4-HFC-P synthase QRPTase_C PF01729.19 gi|15678169|ref|NP_275284.1| - 0.0009 19.0 0.2 0.011 15.5 0.1 2.1 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain Bacteriocin_IIc PF10439.9 gi|15678169|ref|NP_275284.1| - 0.41 10.8 3.6 8 6.7 0.1 3.5 3 0 0 3 3 3 0 Bacteriocin class II with double-glycine leader peptide IMPDH PF00478.25 gi|15678170|ref|NP_275285.1| - 3.1e-146 486.8 6.6 3.8e-146 486.5 6.6 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|15678170|ref|NP_275285.1| - 1.2e-27 96.0 11.1 1.1e-13 51.4 1.3 3.5 4 0 0 4 4 4 2 CBS domain FMN_dh PF01070.18 gi|15678170|ref|NP_275285.1| - 8.4e-10 38.2 4.3 1.3e-09 37.6 2.7 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|15678170|ref|NP_275285.1| - 1.4e-08 34.6 10.7 0.00014 21.4 5.8 2.6 2 2 0 2 2 2 2 Nitronate monooxygenase Glu_synthase PF01645.17 gi|15678170|ref|NP_275285.1| - 2.6e-06 26.9 4.7 5.9e-06 25.7 4.7 1.6 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|15678170|ref|NP_275285.1| - 0.0004 19.9 1.7 0.0057 16.1 0.2 2.3 1 1 1 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.14 gi|15678170|ref|NP_275285.1| - 0.0034 16.7 1.9 0.0034 16.7 1.9 2.3 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|15678170|ref|NP_275285.1| - 0.0093 15.1 0.2 0.02 14.0 0.2 1.5 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NeuB PF03102.14 gi|15678170|ref|NP_275285.1| - 0.079 12.4 0.1 0.62 9.5 0.0 2.2 3 0 0 3 3 3 0 NeuB family G3P_antiterm PF04309.12 gi|15678170|ref|NP_275285.1| - 0.49 9.8 3.5 1.1 8.7 0.1 2.5 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator NTP_transf_3 PF12804.7 gi|15678171|ref|NP_275286.1| - 4.4e-29 101.9 0.0 5.3e-29 101.6 0.0 1.0 1 0 0 1 1 1 1 MobA-like NTP transferase domain PMBR PF09373.10 gi|15678172|ref|NP_275287.1| - 1.3e-18 66.2 0.2 9.3e-09 35.0 0.0 2.0 2 0 0 2 2 2 2 Pseudomurein-binding repeat FAM91_N PF14647.6 gi|15678172|ref|NP_275287.1| - 0.017 14.4 0.1 0.017 14.4 0.1 1.0 1 0 0 1 1 1 0 FAM91 N-terminus Phage_XkdX PF09693.10 gi|15678172|ref|NP_275287.1| - 0.05 13.6 0.0 0.84 9.7 0.0 2.2 2 0 0 2 2 2 0 Phage uncharacterised protein (Phage_XkdX) Thioredoxin_15 PF18403.1 gi|15678173|ref|NP_275288.1| - 0.012 15.6 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain Methyltransf_31 PF13847.6 gi|15678174|ref|NP_275289.1| - 2e-15 56.9 0.0 4e-15 55.9 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15678174|ref|NP_275289.1| - 2.8e-11 44.0 0.1 6.1e-11 42.9 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15678174|ref|NP_275289.1| - 1.8e-10 41.3 0.0 4.3e-10 40.1 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|15678174|ref|NP_275289.1| - 2.6e-09 37.2 0.1 3.2e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|15678174|ref|NP_275289.1| - 2e-08 34.0 0.0 2.8e-08 33.5 0.0 1.3 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|15678174|ref|NP_275289.1| - 3.5e-07 29.9 0.1 1.2e-06 28.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|15678174|ref|NP_275289.1| - 6.5e-07 29.3 0.0 4.2e-06 26.7 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15678174|ref|NP_275289.1| - 9.4e-07 28.5 0.0 1.2e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_24 PF13578.6 gi|15678174|ref|NP_275289.1| - 1e-06 29.7 0.0 1.8e-06 28.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15678174|ref|NP_275289.1| - 1.6e-06 28.1 0.1 2e-06 27.7 0.1 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Met_10 PF02475.16 gi|15678174|ref|NP_275289.1| - 2.1e-05 24.3 0.0 2.6e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|15678174|ref|NP_275289.1| - 2.1e-05 24.2 0.0 3.8e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 gi|15678174|ref|NP_275289.1| - 0.00016 21.1 0.0 0.0003 20.2 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltr_RsmB-F PF01189.17 gi|15678174|ref|NP_275289.1| - 0.00022 20.9 0.1 0.0036 17.0 0.0 2.0 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|15678174|ref|NP_275289.1| - 0.00023 21.8 0.0 0.00084 20.0 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain TrmK PF04816.12 gi|15678174|ref|NP_275289.1| - 0.00079 19.0 0.1 0.001 18.7 0.1 1.1 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_4 PF02390.17 gi|15678174|ref|NP_275289.1| - 0.002 17.6 0.0 0.014 14.9 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase NodS PF05401.11 gi|15678174|ref|NP_275289.1| - 0.0063 16.1 0.0 0.0096 15.5 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) UPF0020 PF01170.18 gi|15678174|ref|NP_275289.1| - 0.011 15.4 0.2 0.32 10.7 0.3 2.4 2 1 0 2 2 2 0 Putative RNA methylase family UPF0020 GidB PF02527.15 gi|15678174|ref|NP_275289.1| - 0.03 13.6 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_2 PF00891.18 gi|15678174|ref|NP_275289.1| - 0.048 13.0 0.2 0.085 12.1 0.2 1.4 1 1 0 1 1 1 0 O-methyltransferase domain TehB PF03848.14 gi|15678174|ref|NP_275289.1| - 0.059 12.8 0.0 0.08 12.4 0.0 1.5 1 1 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_8 PF05148.15 gi|15678174|ref|NP_275289.1| - 0.093 12.6 0.2 1.2 9.0 0.2 2.0 1 1 0 1 1 1 0 Hypothetical methyltransferase tRNA_U5-meth_tr PF05958.11 gi|15678174|ref|NP_275289.1| - 0.096 11.7 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase FtsJ PF01728.19 gi|15678174|ref|NP_275289.1| - 0.11 12.5 0.0 0.59 10.2 0.0 1.8 2 0 0 2 2 2 0 FtsJ-like methyltransferase rRNA_methylase PF06962.12 gi|15678174|ref|NP_275289.1| - 0.16 11.9 0.0 0.41 10.6 0.0 1.7 2 0 0 2 2 2 0 Putative rRNA methylase Methyltransf_32 PF13679.6 gi|15678174|ref|NP_275289.1| - 0.2 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|15678174|ref|NP_275289.1| - 0.25 10.4 0.0 0.3 10.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Flavoprotein PF02441.19 gi|15678175|ref|NP_275290.1| - 1.5e-26 93.1 0.0 1.9e-26 92.7 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein HD PF01966.22 gi|15678176|ref|NP_275291.1| - 1.5e-14 54.3 0.8 3.6e-14 53.0 0.8 1.7 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 gi|15678176|ref|NP_275291.1| - 0.038 13.5 0.1 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 HDOD domain MoaE PF02391.17 gi|15678177|ref|NP_275292.1| - 3.1e-22 79.0 0.0 4.1e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 MoaE protein CTP_transf_like PF01467.26 gi|15678178|ref|NP_275293.1| - 1.6e-18 67.3 0.0 2e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like DUF5446 PF17522.2 gi|15678178|ref|NP_275293.1| - 0.066 13.4 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5446) HIGH_NTase1 PF05636.11 gi|15678178|ref|NP_275293.1| - 0.087 12.0 0.0 0.29 10.3 0.0 1.7 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase ABC_tran PF00005.27 gi|15678179|ref|NP_275294.1| - 1.6e-51 174.4 0.0 1.1e-24 87.5 0.0 2.5 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|15678179|ref|NP_275294.1| - 2.4e-11 44.0 0.8 0.049 13.4 0.1 4.2 4 0 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15678179|ref|NP_275294.1| - 4e-07 30.4 4.2 0.075 13.3 0.1 4.4 2 2 0 3 3 3 2 AAA domain AAA_16 PF13191.6 gi|15678179|ref|NP_275294.1| - 9.2e-07 29.4 1.6 0.045 14.1 0.3 3.0 3 1 0 3 3 2 2 AAA ATPase domain AAA_18 PF13238.6 gi|15678179|ref|NP_275294.1| - 4e-06 27.4 0.2 0.21 12.1 0.0 4.2 4 0 0 4 4 4 1 AAA domain AAA_29 PF13555.6 gi|15678179|ref|NP_275294.1| - 6.2e-06 25.9 0.2 0.17 11.7 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.19 gi|15678179|ref|NP_275294.1| - 8.1e-06 25.4 0.4 0.09 12.2 0.0 3.9 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|15678179|ref|NP_275294.1| - 1e-05 25.5 0.1 0.31 10.9 0.0 2.9 3 0 0 3 3 3 2 RsgA GTPase AAA_23 PF13476.6 gi|15678179|ref|NP_275294.1| - 1.5e-05 25.6 0.0 0.043 14.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 gi|15678179|ref|NP_275294.1| - 3.2e-05 23.4 0.3 0.02 14.3 0.0 3.8 4 0 0 4 4 4 1 Bacterial TniB protein NB-ARC PF00931.22 gi|15678179|ref|NP_275294.1| - 0.00012 21.4 0.1 0.12 11.6 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain SbcCD_C PF13558.6 gi|15678179|ref|NP_275294.1| - 0.00023 21.3 0.2 0.075 13.3 0.0 3.7 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 gi|15678179|ref|NP_275294.1| - 0.00026 21.2 0.7 0.27 11.4 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|15678179|ref|NP_275294.1| - 0.00033 20.3 0.5 3.1 7.3 0.0 4.1 4 0 0 4 4 4 1 AAA domain AAA_30 PF13604.6 gi|15678179|ref|NP_275294.1| - 0.00062 19.5 0.7 1.1 9.0 0.2 3.1 2 1 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|15678179|ref|NP_275294.1| - 0.0018 18.3 0.0 3.9 7.5 0.0 3.2 3 0 0 3 3 3 1 AAA domain AAA PF00004.29 gi|15678179|ref|NP_275294.1| - 0.0027 18.1 0.0 15 6.0 0.0 3.9 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 gi|15678179|ref|NP_275294.1| - 0.0034 16.8 1.0 0.64 9.3 0.0 3.5 4 0 0 4 4 4 1 KaiC cobW PF02492.19 gi|15678179|ref|NP_275294.1| - 0.0034 17.0 0.3 1.3 8.6 0.0 2.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 gi|15678179|ref|NP_275294.1| - 0.0043 17.0 1.1 0.49 10.3 0.2 2.4 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|15678179|ref|NP_275294.1| - 0.0078 16.0 1.2 4.2 7.0 0.0 3.3 3 0 0 3 3 3 1 AAA domain AAA_28 PF13521.6 gi|15678179|ref|NP_275294.1| - 0.0092 16.2 0.0 4 7.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|15678179|ref|NP_275294.1| - 0.013 15.4 2.7 3.3 7.6 0.2 2.6 2 0 0 2 2 2 0 NACHT domain PduV-EutP PF10662.9 gi|15678179|ref|NP_275294.1| - 0.016 14.9 0.0 8.5 6.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation T2SSE PF00437.20 gi|15678179|ref|NP_275294.1| - 0.017 14.2 0.1 0.73 8.8 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein PhoH PF02562.16 gi|15678179|ref|NP_275294.1| - 0.019 14.4 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein Zeta_toxin PF06414.12 gi|15678179|ref|NP_275294.1| - 0.024 13.9 0.0 3 7.1 0.0 3.0 3 0 0 3 3 3 0 Zeta toxin Rad17 PF03215.15 gi|15678179|ref|NP_275294.1| - 0.033 14.1 0.0 3.9 7.4 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain TsaE PF02367.17 gi|15678179|ref|NP_275294.1| - 0.035 14.1 0.0 4 7.5 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 gi|15678179|ref|NP_275294.1| - 0.039 13.9 0.0 7.6 6.4 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 gi|15678179|ref|NP_275294.1| - 0.058 12.8 0.0 4.8 6.5 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|15678179|ref|NP_275294.1| - 0.059 13.1 0.1 2.8 7.6 0.0 3.2 4 0 0 4 4 4 0 IstB-like ATP binding protein PRK PF00485.18 gi|15678179|ref|NP_275294.1| - 0.059 13.1 0.0 3.1 7.5 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family MMR_HSR1 PF01926.23 gi|15678179|ref|NP_275294.1| - 0.066 13.3 0.0 7 6.8 0.0 2.7 3 0 0 3 3 2 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|15678179|ref|NP_275294.1| - 0.084 13.0 1.2 1.1 9.3 0.1 2.7 3 0 0 3 3 3 0 Helicase HerA, central domain ATP-synt_ab PF00006.25 gi|15678179|ref|NP_275294.1| - 0.094 12.4 0.0 4.3 6.9 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_19 PF13245.6 gi|15678179|ref|NP_275294.1| - 0.095 13.0 0.9 16 5.8 0.0 2.9 4 0 0 4 4 2 0 AAA domain Roc PF08477.13 gi|15678179|ref|NP_275294.1| - 0.11 12.8 0.2 20 5.4 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_15 PF13175.6 gi|15678179|ref|NP_275294.1| - 0.16 11.6 0.1 3.8 7.1 0.0 2.3 3 0 0 3 3 2 0 AAA ATPase domain DLIC PF05783.11 gi|15678179|ref|NP_275294.1| - 0.21 10.4 0.1 1.6 7.4 0.0 2.0 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) Pox_A32 PF04665.12 gi|15678179|ref|NP_275294.1| - 0.44 10.0 1.6 16 4.9 0.2 2.7 3 0 0 3 3 3 0 Poxvirus A32 protein Flavin_Reduct PF01613.18 gi|15678180|ref|NP_275295.1| - 5.6e-31 107.7 0.1 7.1e-31 107.4 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Putative_PNPOx PF01243.20 gi|15678180|ref|NP_275295.1| - 0.00076 19.6 0.0 0.0013 18.9 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|15678180|ref|NP_275295.1| - 0.005 16.6 0.0 0.0058 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Usp PF00582.26 gi|15678181|ref|NP_275296.1| - 1.3e-32 113.3 1.5 1.4e-32 113.1 1.5 1.0 1 0 0 1 1 1 1 Universal stress protein family DAGK_prokar PF01219.19 gi|15678182|ref|NP_275297.1| - 0.11 12.4 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 Prokaryotic diacylglycerol kinase Rubredoxin PF00301.20 gi|15678183|ref|NP_275298.1| - 9.1e-25 86.4 5.6 1e-24 86.2 5.6 1.1 1 0 0 1 1 1 1 Rubredoxin PHD_4 PF16866.5 gi|15678183|ref|NP_275298.1| - 2.3e-05 24.4 0.1 2.9e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 PHD-finger zinc_ribbon_10 PF10058.9 gi|15678183|ref|NP_275298.1| - 0.002 17.8 0.9 0.48 10.2 0.0 2.1 2 0 0 2 2 2 2 Predicted integral membrane zinc-ribbon metal-binding protein Zn-ribbon_8 PF09723.10 gi|15678183|ref|NP_275298.1| - 0.0023 18.0 3.9 0.016 15.3 3.9 2.0 1 1 0 1 1 1 1 Zinc ribbon domain Desulfoferrod_N PF06397.12 gi|15678183|ref|NP_275298.1| - 0.0039 16.8 1.2 0.13 11.9 0.5 2.2 2 0 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain RNA_POL_M_15KD PF02150.16 gi|15678183|ref|NP_275298.1| - 0.0043 16.9 2.8 0.045 13.6 0.2 2.2 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit HypA PF01155.19 gi|15678183|ref|NP_275298.1| - 0.0058 16.6 0.2 0.0066 16.5 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 gi|15678183|ref|NP_275298.1| - 0.013 15.4 1.6 2.5 8.2 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|15678183|ref|NP_275298.1| - 0.021 14.7 4.0 0.37 10.7 0.2 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|15678183|ref|NP_275298.1| - 0.022 14.7 0.8 1.7 8.8 0.8 2.1 1 1 1 2 2 2 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|15678183|ref|NP_275298.1| - 0.026 14.4 1.8 1.1 9.2 1.7 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|15678183|ref|NP_275298.1| - 0.027 14.0 1.9 2.6 7.6 0.4 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-Sec23_Sec24 PF04810.15 gi|15678183|ref|NP_275298.1| - 0.029 14.4 0.2 1.1 9.3 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger zf-H2C2_2 PF13465.6 gi|15678183|ref|NP_275298.1| - 0.029 14.8 2.0 3.9 8.1 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain Nudix_N_2 PF14803.6 gi|15678183|ref|NP_275298.1| - 0.033 14.1 1.4 3.4 7.7 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal Rubredoxin_2 PF18073.1 gi|15678183|ref|NP_275298.1| - 0.046 13.5 8.6 0.29 10.9 1.4 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain RbpA PF13397.6 gi|15678183|ref|NP_275298.1| - 0.065 13.8 0.9 0.64 10.7 0.6 2.0 1 1 1 2 2 2 0 RNA polymerase-binding protein Elf1 PF05129.13 gi|15678183|ref|NP_275298.1| - 0.083 12.9 0.9 2.4 8.3 0.0 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like UPF0547 PF10571.9 gi|15678183|ref|NP_275298.1| - 0.085 13.0 3.1 2.5 8.2 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C2H2_3 PF13878.6 gi|15678183|ref|NP_275298.1| - 0.088 12.6 1.4 2.3 8.1 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO TFIIS_C PF01096.18 gi|15678183|ref|NP_275298.1| - 0.092 12.6 2.8 5.1 7.0 0.3 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) C1_2 PF03107.16 gi|15678183|ref|NP_275298.1| - 0.13 12.6 1.2 2.6 8.4 0.1 2.1 2 0 0 2 2 2 0 C1 domain CpXC PF14353.6 gi|15678183|ref|NP_275298.1| - 0.15 12.1 0.3 0.95 9.5 0.0 1.9 2 0 0 2 2 2 0 CpXC protein zf-ribbon_3 PF13248.6 gi|15678183|ref|NP_275298.1| - 0.17 11.3 0.4 0.17 11.3 0.4 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.6 gi|15678183|ref|NP_275298.1| - 0.33 11.6 5.3 0.65 10.7 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-HIT PF04438.16 gi|15678183|ref|NP_275298.1| - 0.38 10.7 5.7 5.3 7.0 1.5 2.2 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_2 PF13240.6 gi|15678183|ref|NP_275298.1| - 0.43 10.4 5.5 1.2 9.0 1.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|15678183|ref|NP_275298.1| - 1.3 9.6 4.0 13 6.5 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Rubredoxin PF00301.20 gi|15678184|ref|NP_275299.1| - 1.6e-26 92.1 4.2 1.7e-26 92.0 4.2 1.0 1 0 0 1 1 1 1 Rubredoxin A2L_zn_ribbon PF08792.10 gi|15678184|ref|NP_275299.1| - 0.0049 16.6 2.2 0.27 11.0 0.3 2.1 2 0 0 2 2 2 1 A2L zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|15678184|ref|NP_275299.1| - 0.0057 16.8 2.1 0.044 13.9 2.1 2.1 1 1 0 1 1 1 1 Zinc ribbon domain Vps36-NZF-N PF16988.5 gi|15678184|ref|NP_275299.1| - 0.0086 15.4 0.2 0.18 11.2 0.0 2.1 2 0 0 2 2 2 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain TF_Zn_Ribbon PF08271.12 gi|15678184|ref|NP_275299.1| - 0.011 15.2 2.8 1.1 8.9 0.4 2.4 2 1 0 2 2 2 0 TFIIB zinc-binding Prim_Zn_Ribbon PF08273.12 gi|15678184|ref|NP_275299.1| - 0.012 15.8 1.3 0.22 11.8 0.2 2.2 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase PHD_4 PF16866.5 gi|15678184|ref|NP_275299.1| - 0.022 14.8 0.9 0.04 14.0 0.9 1.4 1 1 0 1 1 1 0 PHD-finger zf-piccolo PF05715.13 gi|15678184|ref|NP_275299.1| - 0.037 14.2 0.2 1.8 8.8 0.0 2.1 2 0 0 2 2 2 0 Piccolo Zn-finger zf-Sec23_Sec24 PF04810.15 gi|15678184|ref|NP_275299.1| - 0.041 14.0 0.1 3.2 7.9 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Nudix_N_2 PF14803.6 gi|15678184|ref|NP_275299.1| - 0.041 13.8 1.1 3.2 7.7 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-RanBP PF00641.18 gi|15678184|ref|NP_275299.1| - 0.053 12.8 0.3 0.053 12.8 0.3 1.9 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-nanos PF05741.13 gi|15678184|ref|NP_275299.1| - 0.058 13.6 0.6 7.2 6.9 0.1 2.1 2 0 0 2 2 2 0 Nanos RNA binding domain Rubredoxin_2 PF18073.1 gi|15678184|ref|NP_275299.1| - 0.085 12.6 6.8 0.7 9.7 0.9 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain ADK_lid PF05191.14 gi|15678184|ref|NP_275299.1| - 0.22 11.5 2.8 1.2 9.2 2.8 1.9 1 1 0 1 1 1 0 Adenylate kinase, active site lid Zn_ribbon_SprT PF17283.2 gi|15678184|ref|NP_275299.1| - 0.53 10.2 3.7 3.6 7.6 0.2 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2 PF00096.26 gi|15678184|ref|NP_275299.1| - 0.62 10.6 2.3 8.4 7.1 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn-C2H2_12 PF18112.1 gi|15678184|ref|NP_275299.1| - 2.6 8.6 7.0 12 6.4 1.7 2.4 2 1 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain Lactamase_B PF00753.27 gi|15678185|ref|NP_275300.1| - 1.5e-09 38.1 0.0 2.9e-09 37.2 0.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15678185|ref|NP_275300.1| - 8.1e-06 25.5 0.1 1.9e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Flavodoxin_1 PF00258.25 gi|15678185|ref|NP_275300.1| - 0.0073 16.5 0.0 0.017 15.4 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|15678185|ref|NP_275300.1| - 0.052 13.8 0.0 0.088 13.1 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain HD_5 PF13487.6 gi|15678185|ref|NP_275300.1| - 0.092 13.0 0.0 0.27 11.5 0.0 1.8 1 0 0 1 1 1 0 HD domain PGM_PMM_II PF02879.16 gi|15678185|ref|NP_275300.1| - 0.17 12.5 0.0 0.52 11.0 0.0 1.7 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ferritin PF00210.24 gi|15678186|ref|NP_275301.1| - 4.8e-45 153.0 2.3 5.5e-45 152.8 2.3 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|15678186|ref|NP_275301.1| - 0.0071 16.8 1.5 0.036 14.5 1.6 1.9 1 1 0 1 1 1 1 Rubrerythrin Acid_phosphat_B PF03767.14 gi|15678186|ref|NP_275301.1| - 0.025 14.2 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) AhpC-TSA PF00578.21 gi|15678187|ref|NP_275302.1| - 3.6e-30 104.4 0.0 6.1e-30 103.7 0.0 1.4 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 gi|15678187|ref|NP_275302.1| - 1e-10 41.5 0.0 1.4e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|15678187|ref|NP_275302.1| - 3.7e-10 39.5 0.1 6e-10 38.8 0.1 1.3 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Sod_Fe_C PF02777.18 gi|15678188|ref|NP_275303.1| - 1.8e-37 127.6 0.7 2.4e-37 127.2 0.3 1.4 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|15678188|ref|NP_275303.1| - 3e-32 110.9 0.3 5.2e-32 110.2 0.3 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain AMP-binding_C_2 PF14535.6 gi|15678189|ref|NP_275304.1| - 1.3e-32 111.9 0.9 4.2e-32 110.3 0.4 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15678189|ref|NP_275304.1| - 5.4e-14 51.6 0.7 1.4e-13 50.2 0.7 1.7 1 1 0 1 1 1 1 AMP-binding enzyme ACT PF01842.25 gi|15678190|ref|NP_275305.1| - 4e-16 58.5 0.0 5e-07 29.4 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|15678190|ref|NP_275305.1| - 0.00055 20.5 0.0 0.76 10.4 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.6 gi|15678190|ref|NP_275305.1| - 0.088 12.8 0.0 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 ACT domain MarR_2 PF12802.7 gi|15678191|ref|NP_275306.1| - 9e-10 38.3 0.0 3e-09 36.6 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15678191|ref|NP_275306.1| - 2.7e-09 36.4 0.3 1.2e-08 34.4 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|15678191|ref|NP_275306.1| - 2.4e-06 27.9 0.0 1.4e-05 25.5 0.0 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|15678191|ref|NP_275306.1| - 3.5e-06 26.9 0.1 8.3e-06 25.7 0.1 1.7 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|15678191|ref|NP_275306.1| - 8.6e-06 25.6 0.1 2.5e-05 24.1 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|15678191|ref|NP_275306.1| - 2.6e-05 24.1 0.1 9.4e-05 22.3 0.1 2.0 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 gi|15678191|ref|NP_275306.1| - 0.0013 18.4 0.0 0.0027 17.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|15678191|ref|NP_275306.1| - 0.0047 17.2 0.1 0.01 16.1 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_5 PF01022.20 gi|15678191|ref|NP_275306.1| - 0.0052 16.6 0.0 0.021 14.7 0.0 2.0 1 1 1 2 2 2 1 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|15678191|ref|NP_275306.1| - 0.012 15.8 0.1 0.029 14.6 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_23 PF13384.6 gi|15678191|ref|NP_275306.1| - 0.018 14.8 0.0 0.047 13.5 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain Mrr_N PF14338.6 gi|15678191|ref|NP_275306.1| - 0.028 14.6 0.1 0.071 13.2 0.1 1.9 1 1 0 1 1 1 0 Mrr N-terminal domain HTH_36 PF13730.6 gi|15678191|ref|NP_275306.1| - 0.049 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|15678191|ref|NP_275306.1| - 0.053 13.4 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Mnd1 PF03962.15 gi|15678191|ref|NP_275306.1| - 0.054 13.8 0.1 0.12 12.7 0.1 1.5 1 0 0 1 1 1 0 Mnd1 HTH domain LacI PF00356.21 gi|15678191|ref|NP_275306.1| - 0.057 13.2 0.1 0.37 10.6 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_13 PF11972.8 gi|15678191|ref|NP_275306.1| - 0.057 13.5 0.0 1.1 9.4 0.0 2.6 1 1 1 2 2 2 0 HTH DNA binding domain HTH_20 PF12840.7 gi|15678191|ref|NP_275306.1| - 0.063 13.3 0.0 0.29 11.2 0.0 2.2 2 0 0 2 2 1 0 Helix-turn-helix domain SMC_ScpB PF04079.16 gi|15678191|ref|NP_275306.1| - 0.099 12.3 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB HTH_3 PF01381.22 gi|15678191|ref|NP_275306.1| - 0.099 12.7 0.6 0.73 9.9 0.0 2.6 3 0 0 3 3 3 0 Helix-turn-helix KORA PF16509.5 gi|15678191|ref|NP_275306.1| - 0.14 12.5 0.0 0.31 11.3 0.0 1.6 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor DUF4364 PF14277.6 gi|15678191|ref|NP_275306.1| - 0.14 11.9 0.0 0.34 10.6 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) DHHA1 PF02272.19 gi|15678192|ref|NP_275307.1| - 1.2e-18 67.8 0.0 3.4e-18 66.4 0.0 1.7 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|15678192|ref|NP_275307.1| - 0.00026 21.2 0.0 0.00046 20.4 0.0 1.3 1 0 0 1 1 1 1 DHH family SRP19 PF01922.17 gi|15678193|ref|NP_275308.1| - 2.6e-24 86.0 0.0 3.1e-24 85.7 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein cIII PF08134.11 gi|15678193|ref|NP_275308.1| - 0.016 14.9 1.3 0.47 10.3 0.1 2.4 2 0 0 2 2 2 0 cIII protein family DUF3077 PF11275.8 gi|15678193|ref|NP_275308.1| - 0.076 13.3 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3077) HEM4 PF02602.15 gi|15678194|ref|NP_275309.1| - 7.4e-56 189.1 0.3 8.5e-56 188.9 0.3 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Nitro_FeMo-Co PF02579.17 gi|15678194|ref|NP_275309.1| - 0.039 14.3 0.2 0.2 12.0 0.1 2.2 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor TP_methylase PF00590.20 gi|15678195|ref|NP_275310.1| - 5.4e-52 176.8 0.4 6.2e-52 176.6 0.4 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases GATase_5 PF13507.6 gi|15678196|ref|NP_275311.1| - 3.7e-44 150.8 0.0 5.1e-44 150.3 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|15678196|ref|NP_275311.1| - 3.6e-09 36.7 0.0 6.3e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|15678196|ref|NP_275311.1| - 4.5e-09 36.3 0.0 6.6e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|15678196|ref|NP_275311.1| - 1.5e-07 31.2 0.0 2.2e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|15678196|ref|NP_275311.1| - 5.8e-05 23.0 0.0 0.00012 22.0 0.0 1.5 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|15678196|ref|NP_275311.1| - 0.0024 17.7 0.1 0.0089 15.8 0.1 2.0 2 1 0 2 2 2 1 Peptidase C26 PurS PF02700.14 gi|15678197|ref|NP_275312.1| - 1.5e-24 85.9 0.1 1.7e-24 85.8 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase PAS_3 PF08447.12 gi|15678197|ref|NP_275312.1| - 0.16 12.2 0.0 0.94 9.8 0.0 1.9 2 0 0 2 2 2 0 PAS fold Toprim_C_rpt PF13368.6 gi|15678197|ref|NP_275312.1| - 0.19 11.8 0.3 0.42 10.6 0.1 1.7 1 1 1 2 2 2 0 Topoisomerase C-terminal repeat SAICAR_synt PF01259.18 gi|15678198|ref|NP_275313.1| - 2.1e-54 184.8 0.0 2.5e-54 184.6 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase SIS PF01380.22 gi|15678199|ref|NP_275314.1| - 1.3e-54 183.6 0.0 2.4e-29 101.9 0.6 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|15678199|ref|NP_275314.1| - 4.4e-24 85.2 0.0 8.2e-24 84.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|15678199|ref|NP_275314.1| - 7.8e-18 64.6 0.0 1.3e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|15678199|ref|NP_275314.1| - 0.0045 15.9 0.0 0.0075 15.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Glycos_transf_2 PF00535.26 gi|15678200|ref|NP_275315.1| - 1.2e-29 103.3 0.1 1.7e-29 102.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678200|ref|NP_275315.1| - 3.3e-20 73.0 0.0 4.3e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|15678200|ref|NP_275315.1| - 1.8e-08 34.5 0.2 6.9e-08 32.6 0.2 1.8 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|15678200|ref|NP_275315.1| - 0.0016 18.0 0.8 0.12 11.8 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glycos_transf_1 PF00534.20 gi|15678201|ref|NP_275316.1| - 1.7e-46 157.9 0.0 2.4e-46 157.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678201|ref|NP_275316.1| - 4.7e-30 104.8 1.2 7.3e-30 104.2 1.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|15678201|ref|NP_275316.1| - 2.3e-29 102.6 0.0 5e-29 101.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|15678201|ref|NP_275316.1| - 1.3e-22 81.0 2.0 2.3e-22 80.1 2.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678201|ref|NP_275316.1| - 7.2e-15 55.2 0.0 1.6e-14 54.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|15678201|ref|NP_275316.1| - 1e-07 32.1 0.0 1.7e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like HisKA_2 PF07568.12 gi|15678202|ref|NP_275317.1| - 1.1e-25 89.5 1.2 2.8e-25 88.2 1.2 1.8 1 0 0 1 1 1 1 Histidine kinase PAS_4 PF08448.10 gi|15678202|ref|NP_275317.1| - 3.5e-23 82.0 0.0 2.6e-07 30.9 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|15678202|ref|NP_275317.1| - 3e-21 75.6 0.0 1.1e-09 38.5 0.0 4.0 3 1 0 3 3 3 3 PAS domain PAS PF00989.25 gi|15678202|ref|NP_275317.1| - 5.9e-21 74.6 0.1 2.8e-08 33.7 0.0 4.1 3 1 0 3 3 3 3 PAS fold PAS_3 PF08447.12 gi|15678202|ref|NP_275317.1| - 3.1e-16 59.4 0.0 2.3e-12 47.0 0.1 3.4 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|15678202|ref|NP_275317.1| - 4.2e-14 52.2 0.0 5.6e-06 26.3 0.0 3.6 3 0 0 3 3 3 2 PAS domain HisKA_7TM PF16927.5 gi|15678202|ref|NP_275317.1| - 1.3e-11 45.0 20.9 2e-11 44.4 20.9 1.2 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|15678202|ref|NP_275317.1| - 5.7e-10 39.7 0.7 2.5e-09 37.6 0.1 2.4 3 1 0 3 3 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|15678202|ref|NP_275317.1| - 6.3e-09 36.4 0.2 1.3e-08 35.4 0.2 1.6 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|15678202|ref|NP_275317.1| - 1.3e-06 28.4 0.0 3.2e-06 27.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|15678202|ref|NP_275317.1| - 0.011 15.9 0.0 2.3 8.4 0.0 2.8 2 1 0 2 2 2 0 PAS fold T4SS PF07996.11 gi|15678202|ref|NP_275317.1| - 0.11 12.9 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion system proteins HATPase_c_3 PF13589.6 gi|15678202|ref|NP_275317.1| - 0.14 12.0 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Methyltransf_30 PF05430.11 gi|15678203|ref|NP_275318.1| - 5.9e-36 123.1 0.0 1.2e-35 122.1 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_25 PF13649.6 gi|15678203|ref|NP_275318.1| - 0.015 16.0 0.0 1.2 9.9 0.0 2.5 1 1 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|15678203|ref|NP_275318.1| - 0.033 13.9 0.0 0.23 11.2 0.0 2.0 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TGT PF01702.18 gi|15678204|ref|NP_275319.1| - 1.2e-78 264.7 0.0 1.8e-78 264.2 0.0 1.2 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.6 gi|15678204|ref|NP_275319.1| - 1.2e-27 95.8 0.0 4.4e-27 94.0 0.0 2.0 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|15678204|ref|NP_275319.1| - 3.1e-17 62.3 0.1 9e-17 60.8 0.1 1.9 1 0 0 1 1 1 1 PUA domain DUF5591 PF17884.1 gi|15678204|ref|NP_275319.1| - 9.2e-06 25.6 0.0 2.1e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) UPF0113 PF03657.13 gi|15678204|ref|NP_275319.1| - 0.051 13.8 0.0 0.098 12.9 0.0 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain NAC PF01849.18 gi|15678205|ref|NP_275320.1| - 1.8e-17 63.0 5.0 3.4e-17 62.2 5.0 1.4 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 gi|15678205|ref|NP_275320.1| - 0.0049 16.7 0.1 0.007 16.2 0.1 1.3 1 0 0 1 1 1 1 UBA-like domain UBA PF00627.31 gi|15678205|ref|NP_275320.1| - 0.036 14.0 0.1 0.036 14.0 0.1 2.0 2 0 0 2 2 2 0 UBA/TS-N domain SPT6_acidic PF14632.6 gi|15678205|ref|NP_275320.1| - 0.038 14.6 1.3 0.05 14.2 0.3 1.7 1 1 1 2 2 2 0 Acidic N-terminal SPT6 Aconitase_C PF00694.19 gi|15678205|ref|NP_275320.1| - 0.047 14.0 0.1 0.061 13.7 0.1 1.3 1 1 0 1 1 1 0 Aconitase C-terminal domain SAM_KSR1 PF13543.6 gi|15678205|ref|NP_275320.1| - 0.14 12.3 2.0 0.89 9.7 0.2 2.1 1 1 1 2 2 2 0 SAM like domain present in kinase suppressor RAS 1 Metallophos PF00149.28 gi|15678206|ref|NP_275321.1| - 1.1e-18 68.5 1.0 1.3e-18 68.3 1.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15678206|ref|NP_275321.1| - 4e-10 40.1 0.7 8e-10 39.2 0.7 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PGA_cap PF09587.10 gi|15678206|ref|NP_275321.1| - 0.047 13.2 0.2 0.054 12.9 0.2 1.4 1 1 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap MutL PF13941.6 gi|15678206|ref|NP_275321.1| - 0.066 11.8 0.0 0.085 11.4 0.0 1.1 1 0 0 1 1 1 0 MutL protein RNase_Zc3h12a PF11977.8 gi|15678207|ref|NP_275322.1| - 1.4e-29 102.9 0.1 2e-29 102.4 0.1 1.3 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain PRORP PF16953.5 gi|15678207|ref|NP_275322.1| - 1.7e-05 24.5 0.0 2.9e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Protein-only RNase P DUF2067 PF09840.9 gi|15678207|ref|NP_275322.1| - 0.04 13.5 0.6 0.1 12.2 0.6 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) Nitr_red_bet_C PF14711.6 gi|15678207|ref|NP_275322.1| - 0.044 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal DUF5615 PF18480.1 gi|15678207|ref|NP_275322.1| - 0.049 13.4 0.7 1.3 8.9 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5615) PID_2 PF14719.6 gi|15678207|ref|NP_275322.1| - 0.065 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) PhoR PF11808.8 gi|15678208|ref|NP_275323.1| - 0.11 12.9 2.7 0.2 12.1 2.7 1.4 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR ArgJ PF01960.18 gi|15678210|ref|NP_275325.1| - 5.2e-135 450.0 12.1 6.2e-135 449.7 12.1 1.0 1 0 0 1 1 1 1 ArgJ family AA_kinase PF00696.28 gi|15678211|ref|NP_275326.1| - 4.5e-48 163.9 1.6 5.2e-48 163.7 1.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family Iso_dh PF00180.20 gi|15678212|ref|NP_275327.1| - 7.8e-110 367.3 0.1 9.6e-110 367.0 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase TPR_2 PF07719.17 gi|15678213|ref|NP_275328.1| - 3.6e-13 48.5 8.2 0.00033 20.5 0.0 4.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678213|ref|NP_275328.1| - 4e-13 49.4 6.6 1.3e-05 25.4 0.9 4.2 2 2 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15678213|ref|NP_275328.1| - 1.6e-12 46.6 3.4 0.00039 20.1 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678213|ref|NP_275328.1| - 3.4e-11 42.4 5.2 0.0076 16.4 0.0 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15678213|ref|NP_275328.1| - 7.7e-10 38.1 4.2 0.026 14.6 0.0 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678213|ref|NP_275328.1| - 2.3e-08 34.2 3.9 0.14 13.0 0.1 4.8 3 2 2 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15678213|ref|NP_275328.1| - 4e-08 32.9 4.2 1.9e-05 24.3 0.1 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|15678213|ref|NP_275328.1| - 4.5e-06 26.3 0.0 0.012 15.0 0.0 2.1 2 0 0 2 2 2 2 MalT-like TPR region TPR_16 PF13432.6 gi|15678213|ref|NP_275328.1| - 6.7e-06 26.7 0.5 5.7e-05 23.7 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678213|ref|NP_275328.1| - 1.3e-05 25.6 1.0 1 9.9 0.0 3.5 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678213|ref|NP_275328.1| - 1.3e-05 24.8 0.1 0.15 11.8 0.0 3.5 3 0 0 3 3 3 2 TPR repeat SNAP PF14938.6 gi|15678213|ref|NP_275328.1| - 0.00011 21.8 0.2 0.11 11.9 0.2 2.7 2 1 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_6 PF13174.6 gi|15678213|ref|NP_275328.1| - 0.0045 17.5 2.7 3.5 8.4 0.0 3.9 5 0 0 5 5 4 1 Tetratricopeptide repeat SRP68 PF16969.5 gi|15678213|ref|NP_275328.1| - 0.0052 15.8 0.0 0.029 13.4 0.0 2.0 2 0 0 2 2 2 1 RNA-binding signal recognition particle 68 TPR_21 PF09976.9 gi|15678213|ref|NP_275328.1| - 0.028 14.2 0.1 0.26 11.0 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain RPN7 PF10602.9 gi|15678213|ref|NP_275328.1| - 0.043 13.5 1.1 1.1 8.9 0.2 3.0 2 1 0 3 3 3 0 26S proteasome subunit RPN7 DUF2225 PF09986.9 gi|15678213|ref|NP_275328.1| - 0.089 12.5 0.7 3.5 7.3 0.2 2.7 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2225) TPR_9 PF13371.6 gi|15678213|ref|NP_275328.1| - 0.21 11.8 2.4 2.1 8.6 0.2 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat HEAT_2 PF13646.6 gi|15678215|ref|NP_275330.1| - 7.6e-18 64.7 0.3 1.9e-14 53.8 0.0 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT_PBS PF03130.16 gi|15678215|ref|NP_275330.1| - 1.6e-15 56.1 0.7 1.6e-06 28.2 0.1 3.4 3 1 0 3 3 3 3 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|15678215|ref|NP_275330.1| - 7.1e-10 38.3 0.0 0.0023 18.0 0.0 3.4 3 0 0 3 3 3 2 HEAT repeat HEAT_EZ PF13513.6 gi|15678215|ref|NP_275330.1| - 4.4e-07 30.3 0.1 0.02 15.4 0.0 2.7 2 1 0 2 2 2 2 HEAT-like repeat Arm PF00514.23 gi|15678215|ref|NP_275330.1| - 0.0063 16.5 0.0 5.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|15678215|ref|NP_275330.1| - 0.22 11.5 0.0 1.4 9.0 0.0 2.1 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 Ldh_1_N PF00056.23 gi|15678216|ref|NP_275331.1| - 2.5e-33 115.1 0.1 3.6e-33 114.6 0.1 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|15678216|ref|NP_275331.1| - 3.7e-24 85.5 0.0 5.6e-24 84.9 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Semialdhyde_dh PF01118.24 gi|15678216|ref|NP_275331.1| - 2.5e-06 27.9 0.1 6.9e-06 26.5 0.1 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|15678216|ref|NP_275331.1| - 0.00058 20.0 0.1 0.001 19.2 0.1 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Glyco_hydro_4 PF02056.16 gi|15678216|ref|NP_275331.1| - 0.0025 17.4 0.1 0.011 15.3 0.0 2.0 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase KR PF08659.10 gi|15678216|ref|NP_275331.1| - 0.0039 17.1 0.2 0.0068 16.3 0.2 1.4 1 0 0 1 1 1 1 KR domain Gal_mutarotas_2 PF13802.6 gi|15678216|ref|NP_275331.1| - 0.02 15.2 0.0 0.042 14.2 0.0 1.5 1 0 0 1 1 1 0 Galactose mutarotase-like Glyco_hydro_4C PF11975.8 gi|15678216|ref|NP_275331.1| - 0.023 14.8 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain PK_C PF02887.16 gi|15678216|ref|NP_275331.1| - 0.045 14.0 0.1 1.7 8.9 0.0 3.0 3 0 0 3 3 3 0 Pyruvate kinase, alpha/beta domain SNO PF01174.19 gi|15678218|ref|NP_275333.1| - 6.4e-52 176.1 0.1 7.5e-52 175.9 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.28 gi|15678218|ref|NP_275333.1| - 1.5e-07 31.4 0.0 2.2e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|15678218|ref|NP_275333.1| - 1.8e-05 24.4 0.0 2.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|15678218|ref|NP_275333.1| - 3.3e-05 23.6 0.0 5.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S51 OTCace_N PF02729.21 gi|15678218|ref|NP_275333.1| - 0.0027 17.7 0.1 1.6 8.7 0.1 2.2 2 0 0 2 2 2 2 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UPF0180 PF03698.13 gi|15678218|ref|NP_275333.1| - 0.017 15.3 0.1 0.029 14.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) Peptidase_C26 PF07722.13 gi|15678218|ref|NP_275333.1| - 0.1 12.3 0.3 2.6 7.7 0.1 2.6 2 1 1 3 3 3 0 Peptidase C26 Fimbrial_K88 PF02432.15 gi|15678218|ref|NP_275333.1| - 0.22 11.5 0.3 0.34 10.9 0.3 1.3 1 0 0 1 1 1 0 Fimbrial, major and minor subunit GATase_6 PF13522.6 gi|15678219|ref|NP_275334.1| - 6.4e-18 65.3 0.0 9.3e-18 64.7 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|15678219|ref|NP_275334.1| - 9.1e-17 61.1 0.0 1.4e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.21 gi|15678219|ref|NP_275334.1| - 0.00089 18.1 2.9 0.88 8.2 0.0 3.1 2 1 1 3 3 3 3 Glutamine amidotransferases class-II Fra10Ac1 PF09725.9 gi|15678219|ref|NP_275334.1| - 0.0016 18.5 0.0 0.0025 17.9 0.0 1.2 1 0 0 1 1 1 1 Folate-sensitive fragile site protein Fra10Ac1 GATase_4 PF13230.6 gi|15678219|ref|NP_275334.1| - 0.007 15.3 0.0 0.0097 14.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GXGXG PF01493.19 gi|15678220|ref|NP_275335.1| - 6.9e-29 100.8 7.6 9.3e-29 100.4 7.6 1.1 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.13 gi|15678221|ref|NP_275336.1| - 2.8e-43 147.4 0.9 1.4e-42 145.1 0.0 2.0 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|15678221|ref|NP_275336.1| - 1.7e-25 88.9 0.0 3.6e-25 87.9 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_9 PF13187.6 gi|15678221|ref|NP_275336.1| - 2.4e-05 24.4 11.4 2.4e-05 24.4 11.4 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678221|ref|NP_275336.1| - 0.00019 21.1 5.5 0.00019 21.1 5.5 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678221|ref|NP_275336.1| - 0.00053 19.9 22.1 0.0012 18.9 4.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678221|ref|NP_275336.1| - 0.0021 18.1 13.9 0.0021 18.1 13.9 2.7 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678221|ref|NP_275336.1| - 0.0027 17.8 10.5 0.0027 17.8 10.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678221|ref|NP_275336.1| - 0.003 18.1 6.8 0.012 16.2 0.1 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678221|ref|NP_275336.1| - 0.006 16.6 3.3 0.006 16.6 3.3 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678221|ref|NP_275336.1| - 0.0069 16.8 0.7 0.0069 16.8 0.7 3.1 2 1 2 4 4 4 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678221|ref|NP_275336.1| - 0.0081 16.6 2.0 0.0081 16.6 2.0 3.5 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678221|ref|NP_275336.1| - 0.015 15.8 16.8 0.034 14.7 13.9 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678221|ref|NP_275336.1| - 0.048 14.6 4.6 0.048 14.6 4.6 3.3 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15678221|ref|NP_275336.1| - 0.12 12.6 5.6 0.065 13.4 2.9 2.0 2 0 0 2 2 2 0 4Fe-4S dicluster domain E3_binding PF02817.17 gi|15678221|ref|NP_275336.1| - 0.13 12.7 0.1 0.3 11.5 0.1 1.5 1 0 0 1 1 1 0 e3 binding domain Fer4_16 PF13484.6 gi|15678221|ref|NP_275336.1| - 0.51 11.3 15.2 0.5 11.3 3.9 3.1 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|15678221|ref|NP_275336.1| - 0.61 10.9 9.5 0.65 10.8 2.5 3.1 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15678221|ref|NP_275336.1| - 1.1 9.8 10.8 13 6.4 1.0 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Glu_synthase PF01645.17 gi|15678222|ref|NP_275337.1| - 9.8e-137 456.0 5.3 3e-136 454.4 5.3 1.7 1 1 0 1 1 1 1 Conserved region in glutamate synthase NMO PF03060.15 gi|15678222|ref|NP_275337.1| - 1e-14 54.7 2.8 1.9e-14 53.8 2.8 1.5 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|15678222|ref|NP_275337.1| - 3e-13 49.5 18.4 1.3e-11 44.1 15.4 2.8 2 1 0 2 2 2 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|15678222|ref|NP_275337.1| - 1.1e-09 37.8 11.5 2.2e-09 36.8 6.6 2.6 3 0 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain Fer4_21 PF14697.6 gi|15678222|ref|NP_275337.1| - 4.2e-08 33.2 10.9 4.2e-08 33.2 10.9 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678222|ref|NP_275337.1| - 2.5e-07 30.2 13.1 2.2e-06 27.3 4.2 3.5 3 0 0 3 3 2 2 4Fe-4S binding domain Glu_syn_central PF04898.14 gi|15678222|ref|NP_275337.1| - 1e-06 28.5 1.0 0.00055 19.5 0.1 2.2 2 0 0 2 2 2 2 Glutamate synthase central domain Fer4_9 PF13187.6 gi|15678222|ref|NP_275337.1| - 2.8e-06 27.4 11.6 2.8e-06 27.4 11.6 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678222|ref|NP_275337.1| - 6.7e-05 23.4 1.2 6.7e-05 23.4 1.2 3.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678222|ref|NP_275337.1| - 9.5e-05 23.3 13.6 0.0007 20.5 0.9 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15678222|ref|NP_275337.1| - 0.00075 19.6 12.4 0.00075 19.6 12.4 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain DHO_dh PF01180.21 gi|15678222|ref|NP_275337.1| - 0.0008 18.7 1.9 0.0008 18.7 1.9 1.7 2 1 0 2 2 2 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|15678222|ref|NP_275337.1| - 0.00083 18.9 0.8 0.0019 17.7 0.3 1.8 1 1 0 1 1 1 1 Histidine biosynthesis protein Fer4_6 PF12837.7 gi|15678222|ref|NP_275337.1| - 0.0031 17.5 3.2 0.0031 17.5 3.2 3.3 3 0 0 3 3 2 2 4Fe-4S binding domain ThiG PF05690.14 gi|15678222|ref|NP_275337.1| - 0.023 14.0 4.0 0.1 11.9 0.7 2.3 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Fer4_17 PF13534.6 gi|15678222|ref|NP_275337.1| - 0.07 13.7 0.7 0.07 13.7 0.7 3.5 3 0 0 3 3 3 0 4Fe-4S dicluster domain PRAI PF00697.22 gi|15678222|ref|NP_275337.1| - 0.14 12.0 0.1 0.33 10.7 0.0 1.6 2 0 0 2 2 2 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase G3P_antiterm PF04309.12 gi|15678222|ref|NP_275337.1| - 0.15 11.5 0.9 0.29 10.5 0.2 1.8 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator PcrB PF01884.17 gi|15678222|ref|NP_275337.1| - 0.17 11.3 5.7 0.8 9.1 1.1 2.6 1 1 1 2 2 2 0 PcrB family ETF_QO PF05187.13 gi|15678222|ref|NP_275337.1| - 0.17 12.0 6.0 0.43 10.7 6.0 1.6 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_2 PF12797.7 gi|15678222|ref|NP_275337.1| - 0.26 11.4 27.0 0.15 12.2 4.5 3.7 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15678222|ref|NP_275337.1| - 2.3 8.9 22.4 0.55 10.9 1.8 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678222|ref|NP_275337.1| - 3 8.3 22.0 0.085 13.3 0.8 3.4 3 0 0 3 3 3 0 4Fe-4S dicluster domain MFS_1 PF07690.16 gi|15678223|ref|NP_275338.1| - 2.7e-46 158.1 64.3 2.6e-32 112.2 38.4 2.6 1 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15678223|ref|NP_275338.1| - 6.4e-06 25.3 16.9 6.4e-06 25.3 16.9 3.3 2 1 1 3 3 3 1 Sugar (and other) transporter MFS_3 PF05977.13 gi|15678223|ref|NP_275338.1| - 0.0013 17.2 17.3 0.0029 16.1 7.4 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector PUCC PF03209.15 gi|15678223|ref|NP_275338.1| - 0.0029 16.7 14.9 0.022 13.7 1.9 3.1 2 2 0 2 2 2 2 PUCC protein MFS_1_like PF12832.7 gi|15678223|ref|NP_275338.1| - 0.0095 14.8 25.7 0.035 13.0 7.3 3.2 2 1 1 3 3 3 2 MFS_1 like family ATPase_2 PF01637.18 gi|15678224|ref|NP_275339.1| - 5.8e-41 140.9 1.8 3.3e-40 138.5 0.0 2.6 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|15678224|ref|NP_275339.1| - 8.5e-28 96.7 1.2 1.8e-27 95.7 0.6 1.8 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.6 gi|15678224|ref|NP_275339.1| - 2.1e-08 34.3 0.0 6.9e-08 32.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain HTH_IclR PF09339.10 gi|15678224|ref|NP_275339.1| - 2.2e-07 30.5 0.0 6.2e-07 29.1 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain AAA_16 PF13191.6 gi|15678224|ref|NP_275339.1| - 8.1e-07 29.6 0.2 7.8e-06 26.4 0.2 2.4 1 1 0 1 1 1 1 AAA ATPase domain HTH_5 PF01022.20 gi|15678224|ref|NP_275339.1| - 2.6e-06 27.2 0.0 5.3e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family AAA_22 PF13401.6 gi|15678224|ref|NP_275339.1| - 6.2e-05 23.3 0.0 0.00019 21.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain HTH_45 PF14947.6 gi|15678224|ref|NP_275339.1| - 0.00055 19.9 0.1 0.0021 18.0 0.0 2.0 2 0 0 2 2 1 1 Winged helix-turn-helix HTH_24 PF13412.6 gi|15678224|ref|NP_275339.1| - 0.00096 18.7 0.0 0.0028 17.2 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|15678224|ref|NP_275339.1| - 0.0029 17.7 0.0 0.0067 16.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain UPF0102 PF02021.17 gi|15678224|ref|NP_275339.1| - 0.0085 16.3 0.1 0.027 14.7 0.1 1.8 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 HTH_11 PF08279.12 gi|15678224|ref|NP_275339.1| - 0.01 15.8 0.1 0.033 14.2 0.1 2.0 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|15678224|ref|NP_275339.1| - 0.015 15.2 0.1 0.037 13.9 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15678224|ref|NP_275339.1| - 0.03 14.2 0.1 0.08 12.8 0.0 1.7 2 0 0 2 2 2 0 MarR family HTH_28 PF13518.6 gi|15678224|ref|NP_275339.1| - 0.055 13.6 0.3 0.18 12.0 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain YhcG_C PF06250.11 gi|15678224|ref|NP_275339.1| - 0.08 12.8 0.1 0.33 10.8 0.1 1.9 2 0 0 2 2 2 0 YhcG PDDEXK nuclease domain HTH_40 PF14493.6 gi|15678224|ref|NP_275339.1| - 0.082 13.4 1.3 0.24 11.9 0.0 2.4 3 1 1 4 4 2 0 Helix-turn-helix domain Barstar PF01337.18 gi|15678224|ref|NP_275339.1| - 0.094 12.7 0.0 0.53 10.3 0.0 2.2 2 0 0 2 2 2 0 Barstar (barnase inhibitor) HTH_20 PF12840.7 gi|15678224|ref|NP_275339.1| - 0.16 12.0 0.0 0.32 11.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Flot PF15975.5 gi|15678224|ref|NP_275339.1| - 0.17 12.1 0.2 0.34 11.1 0.2 1.4 1 0 0 1 1 1 0 Flotillin zf-CDGSH PF09360.10 gi|15678226|ref|NP_275341.1| - 1.8e-40 136.9 1.3 4.1e-20 71.7 0.1 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|15678226|ref|NP_275341.1| - 2.1e-09 37.3 0.0 1.2e-08 34.9 0.0 2.2 2 0 0 2 2 2 1 Divergent 4Fe-4S mono-cluster BtrH_N PF14399.6 gi|15678227|ref|NP_275342.1| - 0.033 14.4 0.0 0.057 13.7 0.0 1.4 1 1 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal Spore_YtfJ PF09579.10 gi|15678227|ref|NP_275342.1| - 0.047 13.8 0.9 0.2 11.9 0.1 2.2 3 0 0 3 3 3 0 Sporulation protein YtfJ (Spore_YtfJ) CbiM PF01891.16 gi|15678228|ref|NP_275343.1| - 9e-44 149.8 23.6 1e-43 149.6 23.6 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ECF_trnsprt PF12822.7 gi|15678228|ref|NP_275343.1| - 2e-05 24.8 32.1 2e-05 24.8 32.1 1.7 1 1 1 2 2 2 1 ECF transporter, substrate-specific component DUF4536 PF15055.6 gi|15678228|ref|NP_275343.1| - 0.0099 16.1 0.2 0.0099 16.1 0.2 2.9 2 1 1 3 3 3 1 Domain of unknown function (DUF4536) DUF1440 PF07274.12 gi|15678228|ref|NP_275343.1| - 0.52 10.7 5.4 0.17 12.2 2.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1440) DUF1011 PF06237.12 gi|15678228|ref|NP_275343.1| - 2.7 8.4 11.4 0.79 10.1 6.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1011) Mucin PF01456.17 gi|15678229|ref|NP_275344.1| - 0.029 14.3 4.4 0.044 13.8 3.8 1.6 1 1 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 gi|15678229|ref|NP_275344.1| - 0.096 10.9 4.1 0.11 10.7 4.1 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 CCSAP PF15748.5 gi|15678229|ref|NP_275344.1| - 0.72 10.0 3.8 0.86 9.7 3.8 1.0 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF908 PF06012.12 gi|15678229|ref|NP_275344.1| - 4.6 6.6 4.6 5.4 6.3 4.6 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) DEAD PF00270.29 gi|15678231|ref|NP_275346.1| - 3.6e-51 173.4 0.1 7.7e-51 172.3 0.1 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15678231|ref|NP_275346.1| - 1.3e-31 109.2 0.2 5.7e-29 100.7 0.1 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15678231|ref|NP_275346.1| - 6.9e-06 26.2 0.0 3.4e-05 23.9 0.0 1.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit UTP25 PF06862.12 gi|15678231|ref|NP_275346.1| - 0.0069 15.2 0.2 2.7 6.7 0.0 3.0 3 0 0 3 3 3 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 AAA_19 PF13245.6 gi|15678231|ref|NP_275346.1| - 0.012 16.0 0.0 1.8 8.9 0.0 2.5 2 1 0 2 2 2 0 AAA domain DUF5333 PF17267.2 gi|15678231|ref|NP_275346.1| - 0.029 14.6 0.1 0.41 10.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5333) AAA_22 PF13401.6 gi|15678231|ref|NP_275346.1| - 0.17 12.2 0.1 1.1 9.5 0.0 2.5 1 1 1 2 2 2 0 AAA domain 5-FTHF_cyc-lig PF01812.20 gi|15678232|ref|NP_275347.1| - 1.3e-41 142.5 0.0 1.8e-41 142.0 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family RDD PF06271.12 gi|15678232|ref|NP_275347.1| - 9.8e-10 38.8 6.0 1.4e-09 38.3 6.0 1.2 1 0 0 1 1 1 1 RDD family AIRS_C PF02769.22 gi|15678233|ref|NP_275348.1| - 8.2e-34 117.0 1.3 1.6e-33 116.1 1.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15678233|ref|NP_275348.1| - 1e-18 67.8 0.4 2.5e-18 66.5 0.4 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Prot_ATP_ID_OB PF16450.5 gi|15678233|ref|NP_275348.1| - 0.57 10.2 3.1 8.9 6.4 0.2 2.8 2 2 0 2 2 2 0 Proteasomal ATPase OB C-terminal domain Ribosomal_S8e PF01201.22 gi|15678235|ref|NP_275350.1| - 6.8e-37 126.7 2.7 7.9e-37 126.5 2.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e BRK PF07533.16 gi|15678235|ref|NP_275350.1| - 0.037 13.7 0.3 0.1 12.3 0.0 1.8 2 0 0 2 2 2 0 BRK domain DNA_pol_B PF00136.21 gi|15678236|ref|NP_275351.1| - 9.7e-25 87.2 0.0 1.2e-24 86.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family B Ribosomal_S28e PF01200.18 gi|15678236|ref|NP_275351.1| - 0.045 13.7 0.2 0.14 12.2 0.2 1.8 1 0 0 1 1 1 0 Ribosomal protein S28e GP79 PF17463.2 gi|15678236|ref|NP_275351.1| - 0.078 13.0 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Gene product 79 T2SSK PF03934.13 gi|15678236|ref|NP_275351.1| - 0.21 11.0 0.0 1.5 8.1 0.0 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein K HAD_2 PF13419.6 gi|15678237|ref|NP_275352.1| - 5.3e-31 108.1 0.0 7.9e-31 107.5 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15678237|ref|NP_275352.1| - 1.2e-16 61.7 0.0 5.1e-15 56.3 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15678237|ref|NP_275352.1| - 2.8e-13 49.7 0.0 4.4e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|15678237|ref|NP_275352.1| - 8.6e-07 29.5 0.0 1.1e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|15678237|ref|NP_275352.1| - 0.024 14.7 0.0 0.74 10.0 0.0 2.5 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.14 gi|15678237|ref|NP_275352.1| - 0.029 14.0 0.0 0.087 12.4 0.0 1.7 2 0 0 2 2 2 0 HAD superfamily, subfamily IIIB (Acid phosphatase) Mg_chelatase PF01078.21 gi|15678238|ref|NP_275353.1| - 7.3e-06 25.5 0.0 0.00027 20.4 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|15678238|ref|NP_275353.1| - 0.0093 16.4 0.0 0.058 13.8 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 gi|15678238|ref|NP_275353.1| - 0.012 14.9 0.9 0.61 9.3 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|15678238|ref|NP_275353.1| - 0.041 14.3 0.0 0.13 12.6 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|15678238|ref|NP_275353.1| - 0.05 13.6 0.1 1.4 8.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|15678238|ref|NP_275353.1| - 0.12 11.9 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 gi|15678238|ref|NP_275353.1| - 0.2 11.4 0.0 0.34 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain Exo_endo_phos PF03372.23 gi|15678240|ref|NP_275355.1| - 1.1e-25 90.6 0.1 1.2e-25 90.4 0.1 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|15678240|ref|NP_275355.1| - 8.4e-07 28.8 0.0 2.8e-06 27.2 0.0 1.8 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase FeoB_N PF02421.18 gi|15678241|ref|NP_275356.1| - 1.6e-64 216.1 0.3 2.4e-64 215.6 0.3 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|15678241|ref|NP_275356.1| - 1.2e-21 77.0 24.5 3.4e-11 43.4 8.9 2.9 3 0 0 3 3 3 2 Nucleoside recognition FeoB_Cyto PF17910.1 gi|15678241|ref|NP_275356.1| - 1.3e-18 67.4 0.0 3.2e-17 62.9 0.0 2.2 1 1 1 2 2 2 1 FeoB cytosolic helical domain MMR_HSR1 PF01926.23 gi|15678241|ref|NP_275356.1| - 3e-18 66.0 0.0 5.5e-18 65.1 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|15678241|ref|NP_275356.1| - 3.9e-13 48.9 0.4 2.4e-12 46.3 0.4 2.6 1 0 0 1 1 1 1 Ferrous iron transport protein B C terminus GTP_EFTU PF00009.27 gi|15678241|ref|NP_275356.1| - 3.5e-05 23.4 0.2 0.00012 21.7 0.1 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|15678241|ref|NP_275356.1| - 7.7e-05 22.7 0.4 0.39 10.6 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AIG1 PF04548.16 gi|15678241|ref|NP_275356.1| - 0.00018 20.9 0.0 0.00027 20.4 0.0 1.2 1 0 0 1 1 1 1 AIG1 family ATP_bind_1 PF03029.17 gi|15678241|ref|NP_275356.1| - 0.00062 19.6 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein SRPRB PF09439.10 gi|15678241|ref|NP_275356.1| - 0.00091 18.7 0.0 0.0017 17.9 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 gi|15678241|ref|NP_275356.1| - 0.13 11.9 0.1 0.66 9.6 0.1 2.0 1 1 0 1 1 1 0 Ras family Fe_dep_repr_C PF02742.15 gi|15678242|ref|NP_275357.1| - 1.6e-27 95.4 2.3 2e-27 95.0 0.8 2.0 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|15678242|ref|NP_275357.1| - 1.8e-27 95.3 0.3 3.7e-27 94.3 0.3 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|15678242|ref|NP_275357.1| - 1.8e-19 69.8 0.2 3.5e-19 68.8 0.2 1.5 1 0 0 1 1 1 1 FeoA domain MarR_2 PF12802.7 gi|15678242|ref|NP_275357.1| - 3e-07 30.2 0.0 1.1e-06 28.4 0.0 1.9 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|15678242|ref|NP_275357.1| - 0.00011 22.1 0.1 0.0058 16.5 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15678242|ref|NP_275357.1| - 0.00017 21.4 0.0 0.00051 19.9 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|15678242|ref|NP_275357.1| - 0.00068 19.1 0.1 0.006 16.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15678242|ref|NP_275357.1| - 0.00078 19.3 0.0 0.0016 18.2 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|15678242|ref|NP_275357.1| - 0.001 19.4 0.0 0.0021 18.3 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|15678242|ref|NP_275357.1| - 0.001 19.0 0.1 0.01 15.8 0.0 2.4 3 0 0 3 3 2 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|15678242|ref|NP_275357.1| - 0.0031 17.3 0.0 0.0076 16.0 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|15678242|ref|NP_275357.1| - 0.0039 17.6 0.1 0.02 15.4 0.0 2.2 3 0 0 3 3 2 1 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 gi|15678242|ref|NP_275357.1| - 0.0042 16.8 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 LexA DNA binding domain HTH_12 PF08461.10 gi|15678242|ref|NP_275357.1| - 0.0057 16.6 0.8 0.015 15.3 0.2 2.1 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain FaeA PF04703.12 gi|15678242|ref|NP_275357.1| - 0.0068 16.8 0.0 0.017 15.5 0.0 1.6 1 0 0 1 1 1 1 FaeA-like protein B-block_TFIIIC PF04182.12 gi|15678242|ref|NP_275357.1| - 0.011 15.9 0.0 0.019 15.1 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_6 PF01418.17 gi|15678242|ref|NP_275357.1| - 0.026 14.5 0.0 0.045 13.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FeoC PF09012.10 gi|15678242|ref|NP_275357.1| - 0.058 13.5 0.0 0.17 12.0 0.0 1.8 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_45 PF14947.6 gi|15678242|ref|NP_275357.1| - 0.066 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix TFIIE_alpha PF02002.17 gi|15678242|ref|NP_275357.1| - 0.068 13.0 0.3 0.86 9.5 0.1 2.3 2 0 0 2 2 2 0 TFIIE alpha subunit Gpr1_Fun34_YaaH PF01184.19 gi|15678243|ref|NP_275358.1| - 2.2e-42 145.1 14.8 2.7e-42 144.7 14.8 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF3852 PF12963.7 gi|15678243|ref|NP_275358.1| - 0.15 12.4 2.9 0.73 10.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3852) AMP-binding_C PF13193.6 gi|15678244|ref|NP_275359.1| - 0.051 14.6 0.0 0.065 14.2 0.0 1.2 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15678245|ref|NP_275360.1| - 1.2e-97 327.2 0.0 1.4e-97 327.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|15678245|ref|NP_275360.1| - 3.8e-17 61.9 4.0 1e-16 60.5 4.0 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|15678245|ref|NP_275360.1| - 1.6e-05 25.8 0.8 1.6e-05 25.8 0.8 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Cpn60_TCP1 PF00118.24 gi|15678246|ref|NP_275361.1| - 1.7e-182 607.4 20.0 1.9e-182 607.3 20.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PGM_PMM_II PF02879.16 gi|15678246|ref|NP_275361.1| - 0.014 16.0 0.1 1.8 9.2 0.0 2.8 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ribosomal_S13 PF00416.22 gi|15678246|ref|NP_275361.1| - 0.81 10.1 4.7 4.4 7.7 0.7 2.8 2 0 0 2 2 2 0 Ribosomal protein S13/S18 Flavodoxin_1 PF00258.25 gi|15678248|ref|NP_275363.1| - 2e-12 47.5 0.0 3.9e-12 46.6 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 gi|15678248|ref|NP_275363.1| - 5.5e-08 33.1 0.0 2.7e-07 30.8 0.0 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily PGM_PMM_I PF02878.16 gi|15678248|ref|NP_275363.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fer4 PF00037.27 gi|15678249|ref|NP_275364.1| - 3.9e-06 26.4 18.0 4.8e-06 26.2 2.5 3.4 2 1 1 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678249|ref|NP_275364.1| - 1.6e-05 24.7 16.3 7.7e-05 22.6 2.5 2.8 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678249|ref|NP_275364.1| - 0.00014 22.4 8.0 0.073 13.6 0.4 2.8 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678249|ref|NP_275364.1| - 0.00052 19.9 16.9 0.0047 16.9 2.1 3.1 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678249|ref|NP_275364.1| - 0.00053 20.1 18.1 0.092 12.9 20.5 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Dehalogenase PF13486.6 gi|15678249|ref|NP_275364.1| - 0.00056 19.4 0.0 0.00086 18.8 0.0 1.2 1 0 0 1 1 1 1 Reductive dehalogenase subunit Fer4_9 PF13187.6 gi|15678249|ref|NP_275364.1| - 0.0023 18.1 2.1 0.0023 18.1 2.1 2.8 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678249|ref|NP_275364.1| - 0.004 17.5 15.1 0.021 15.3 2.9 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678249|ref|NP_275364.1| - 0.012 16.1 11.2 0.4 11.1 2.6 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678249|ref|NP_275364.1| - 0.016 15.8 16.7 0.016 15.8 2.8 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678249|ref|NP_275364.1| - 0.016 15.3 18.3 0.086 13.0 18.3 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678249|ref|NP_275364.1| - 0.029 15.3 18.0 0.075 14.0 7.9 2.7 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Zn_protease PF05618.11 gi|15678250|ref|NP_275365.1| - 1.1e-09 38.3 0.0 1.1e-08 35.1 0.0 2.0 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.21 gi|15678250|ref|NP_275365.1| - 0.00013 21.6 0.1 0.0022 17.6 0.1 2.1 1 1 0 1 1 1 1 Polypeptide deformylase CENP-L PF13092.6 gi|15678251|ref|NP_275366.1| - 0.054 13.7 0.0 0.086 13.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 DUF1611 PF07755.11 gi|15678251|ref|NP_275366.1| - 0.096 12.0 0.0 0.4 9.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain UPF0058 PF01893.16 gi|15678252|ref|NP_275367.1| - 1.1e-33 115.4 0.2 1.3e-33 115.2 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 AbfS_sensor PF18225.1 gi|15678252|ref|NP_275367.1| - 0.021 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain Histidinol_dh PF00815.20 gi|15678253|ref|NP_275368.1| - 4e-174 579.4 0.0 4.5e-174 579.2 0.0 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase tRNA-synt_2 PF00152.20 gi|15678254|ref|NP_275369.1| - 1.3e-94 316.9 0.0 1.5e-94 316.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|15678254|ref|NP_275369.1| - 5.7e-13 48.7 0.1 1e-12 47.8 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|15678254|ref|NP_275369.1| - 0.018 14.6 0.3 0.058 12.9 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) YbaB_DNA_bd PF02575.16 gi|15678254|ref|NP_275369.1| - 0.21 11.9 0.1 0.44 10.8 0.1 1.5 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family CbiC PF02570.15 gi|15678255|ref|NP_275370.1| - 4.7e-60 202.6 1.7 5.4e-60 202.4 1.7 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase Aldo_ket_red PF00248.21 gi|15678255|ref|NP_275370.1| - 0.086 12.0 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Aldo/keto reductase family Aminotran_3 PF00202.21 gi|15678256|ref|NP_275371.1| - 2.3e-65 220.9 0.0 2.7e-65 220.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Parvo_NS1 PF01057.17 gi|15678256|ref|NP_275371.1| - 0.025 13.7 0.0 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 A2L_zn_ribbon PF08792.10 gi|15678257|ref|NP_275372.1| - 0.025 14.3 1.2 0.51 10.1 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF496 PF04363.12 gi|15678257|ref|NP_275372.1| - 0.029 14.4 1.5 0.057 13.4 1.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF496) LcrG PF07216.12 gi|15678257|ref|NP_275372.1| - 0.13 12.2 1.2 0.24 11.3 1.2 1.5 1 0 0 1 1 1 0 LcrG protein DUF4012 PF13196.6 gi|15678258|ref|NP_275373.1| - 6.5e-29 101.3 0.0 9.4e-29 100.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4012) PTA_PTB PF01515.19 gi|15678259|ref|NP_275374.1| - 5.6e-05 22.6 0.0 0.017 14.5 0.0 2.1 2 0 0 2 2 2 2 Phosphate acetyl/butaryl transferase Galanin PF01296.18 gi|15678259|ref|NP_275374.1| - 0.12 12.4 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Galanin Prenyltransf PF01255.19 gi|15678260|ref|NP_275375.1| - 1.7e-80 269.8 0.0 1.9e-80 269.6 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase TatD_DNase PF01026.21 gi|15678261|ref|NP_275376.1| - 1.4e-70 237.6 0.0 1.6e-70 237.4 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|15678261|ref|NP_275376.1| - 0.027 14.3 1.4 0.075 12.8 1.4 1.9 1 1 0 1 1 1 0 Amidohydrolase CMD PF02627.20 gi|15678262|ref|NP_275377.1| - 5.8e-25 87.2 0.3 7.2e-25 86.9 0.3 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family RibD_C PF01872.17 gi|15678263|ref|NP_275378.1| - 1.1e-65 221.2 0.1 1.2e-65 221.1 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DUF483 PF04467.12 gi|15678264|ref|NP_275379.1| - 1.9e-55 186.1 0.1 3.6e-55 185.2 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF483) CobN-Mg_chel PF02514.16 gi|15678265|ref|NP_275380.1| - 1.5e-213 711.8 0.0 4e-120 402.4 0.0 2.2 1 1 1 2 2 2 2 CobN/Magnesium Chelatase GXGXG PF01493.19 gi|15678266|ref|NP_275381.1| - 1.1e-08 34.9 11.0 7e-06 25.8 0.2 2.4 2 0 0 2 2 2 2 GXGXG motif DIM PF08194.12 gi|15678266|ref|NP_275381.1| - 0.11 12.7 0.9 0.32 11.2 0.1 2.2 2 0 0 2 2 2 0 DIM protein FapA PF03961.13 gi|15678266|ref|NP_275381.1| - 0.52 8.9 8.4 0.17 10.5 0.5 2.2 2 0 0 2 2 2 0 Flagellar Assembly Protein A AAA PF00004.29 gi|15678268|ref|NP_275383.1| - 9.3e-11 42.3 0.0 2.9e-10 40.7 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|15678268|ref|NP_275383.1| - 1.9e-09 37.5 0.0 3.2e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|15678268|ref|NP_275383.1| - 2.3e-09 37.5 0.0 5.2e-09 36.3 0.0 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|15678268|ref|NP_275383.1| - 6.1e-06 26.7 0.1 2.1e-05 25.0 0.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|15678268|ref|NP_275383.1| - 7.8e-05 22.7 0.0 0.00026 21.0 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|15678268|ref|NP_275383.1| - 0.00029 21.1 0.1 0.00067 19.9 0.1 1.7 1 0 0 1 1 1 1 AAA C-terminal domain AAA_22 PF13401.6 gi|15678268|ref|NP_275383.1| - 0.00031 21.0 1.1 0.0089 16.3 0.4 2.9 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|15678268|ref|NP_275383.1| - 0.00035 20.3 0.0 0.00081 19.2 0.0 1.6 1 1 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 gi|15678268|ref|NP_275383.1| - 0.00037 20.4 0.0 0.0021 17.9 0.0 2.1 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_5 PF07728.14 gi|15678268|ref|NP_275383.1| - 0.00099 19.1 1.2 0.0089 16.0 0.2 3.0 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activ_2 PF14532.6 gi|15678268|ref|NP_275383.1| - 0.0012 18.9 0.0 0.002 18.2 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_18 PF13238.6 gi|15678268|ref|NP_275383.1| - 0.0014 19.2 0.0 0.0059 17.2 0.0 2.2 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|15678268|ref|NP_275383.1| - 0.0035 17.3 0.1 1.2 9.0 0.0 2.4 2 0 0 2 2 2 1 NTPase TniB PF05621.11 gi|15678268|ref|NP_275383.1| - 0.0048 16.3 0.0 1.3 8.4 0.0 2.4 1 1 1 2 2 2 1 Bacterial TniB protein AAA_19 PF13245.6 gi|15678268|ref|NP_275383.1| - 0.0055 17.0 0.1 0.015 15.6 0.1 1.8 1 1 1 2 2 1 1 AAA domain RNA_helicase PF00910.22 gi|15678268|ref|NP_275383.1| - 0.0079 16.6 0.0 0.017 15.5 0.0 1.6 1 0 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.21 gi|15678268|ref|NP_275383.1| - 0.0082 15.5 0.0 0.015 14.7 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|15678268|ref|NP_275383.1| - 0.0094 15.7 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|15678268|ref|NP_275383.1| - 0.01 15.0 0.0 0.016 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|15678268|ref|NP_275383.1| - 0.01 15.4 1.8 0.38 10.3 0.3 2.5 1 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|15678268|ref|NP_275383.1| - 0.013 15.0 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TIP49 PF06068.13 gi|15678268|ref|NP_275383.1| - 0.014 14.7 0.0 0.022 13.9 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_33 PF13671.6 gi|15678268|ref|NP_275383.1| - 0.017 15.3 0.0 0.052 13.7 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|15678268|ref|NP_275383.1| - 0.02 15.3 2.7 2.6 8.4 0.0 3.1 3 1 1 4 4 2 0 AAA domain ABC_tran PF00005.27 gi|15678268|ref|NP_275383.1| - 0.023 15.2 0.0 0.086 13.4 0.0 2.0 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 gi|15678268|ref|NP_275383.1| - 0.039 13.9 0.1 0.57 10.1 0.1 2.2 1 1 1 2 2 2 0 NACHT domain DEAD PF00270.29 gi|15678268|ref|NP_275383.1| - 0.055 13.2 0.2 1.3 8.8 0.0 2.3 1 1 1 2 2 2 0 DEAD/DEAH box helicase Zeta_toxin PF06414.12 gi|15678268|ref|NP_275383.1| - 0.069 12.4 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin ResIII PF04851.15 gi|15678268|ref|NP_275383.1| - 0.07 13.1 0.1 0.69 9.9 0.0 2.3 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_28 PF13521.6 gi|15678268|ref|NP_275383.1| - 0.073 13.3 0.2 0.7 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|15678268|ref|NP_275383.1| - 0.076 12.7 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain NB-ARC PF00931.22 gi|15678268|ref|NP_275383.1| - 0.09 12.0 0.0 0.18 11.0 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain Torsin PF06309.11 gi|15678268|ref|NP_275383.1| - 0.1 12.7 0.0 0.23 11.6 0.0 1.5 1 0 0 1 1 1 0 Torsin DUF3807 PF12720.7 gi|15678268|ref|NP_275383.1| - 0.23 11.7 8.0 0.37 11.0 8.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) AAA_11 PF13086.6 gi|15678268|ref|NP_275383.1| - 1.2 8.8 7.6 0.58 9.9 0.6 2.5 2 1 0 2 2 2 0 AAA domain Rep_fac_C PF08542.11 gi|15678269|ref|NP_275384.1| - 4.9e-20 71.7 0.0 1e-19 70.7 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|15678269|ref|NP_275384.1| - 1.2e-16 61.4 0.0 2.8e-16 60.2 0.0 1.6 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|15678269|ref|NP_275384.1| - 2.1e-15 56.9 0.0 3.3e-11 43.2 0.0 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit Rad17 PF03215.15 gi|15678269|ref|NP_275384.1| - 3.2e-08 33.7 0.0 1.1e-06 28.7 0.0 2.7 2 1 1 3 3 3 1 Rad17 P-loop domain DNA_pol3_delta PF06144.13 gi|15678269|ref|NP_275384.1| - 4e-07 30.0 0.0 8.9e-07 28.9 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_16 PF13191.6 gi|15678269|ref|NP_275384.1| - 8.8e-07 29.5 0.1 0.0002 21.8 0.0 2.8 2 1 1 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 gi|15678269|ref|NP_275384.1| - 9.5e-07 28.7 0.2 8.2e-06 25.6 0.2 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|15678269|ref|NP_275384.1| - 3.7e-06 27.0 0.0 8.7e-06 25.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|15678269|ref|NP_275384.1| - 1.3e-05 25.4 0.0 3.6e-05 24.0 0.0 1.8 1 0 0 1 1 1 1 AAA C-terminal domain Mg_chelatase PF01078.21 gi|15678269|ref|NP_275384.1| - 2.3e-05 23.9 0.0 0.01 15.2 0.0 2.4 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|15678269|ref|NP_275384.1| - 0.00025 20.8 0.0 0.001 18.8 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|15678269|ref|NP_275384.1| - 0.0011 19.6 0.0 0.0023 18.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|15678269|ref|NP_275384.1| - 0.0012 19.1 0.3 0.17 12.2 0.0 3.0 2 1 1 3 3 3 1 AAA domain AAA_24 PF13479.6 gi|15678269|ref|NP_275384.1| - 0.0015 18.3 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|15678269|ref|NP_275384.1| - 0.0016 18.4 0.1 0.025 14.6 0.1 2.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|15678269|ref|NP_275384.1| - 0.0019 18.2 0.0 0.0035 17.4 0.0 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.26 gi|15678269|ref|NP_275384.1| - 0.002 17.8 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain TIP49 PF06068.13 gi|15678269|ref|NP_275384.1| - 0.0029 16.9 0.0 0.074 12.2 0.0 2.1 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_2 PF07724.14 gi|15678269|ref|NP_275384.1| - 0.0035 17.5 0.0 0.0095 16.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_3 PF07726.11 gi|15678269|ref|NP_275384.1| - 0.0078 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|15678269|ref|NP_275384.1| - 0.0093 15.6 0.0 0.02 14.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|15678269|ref|NP_275384.1| - 0.014 15.7 0.0 0.033 14.6 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 gi|15678269|ref|NP_275384.1| - 0.021 14.3 0.0 0.045 13.2 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region TniB PF05621.11 gi|15678269|ref|NP_275384.1| - 0.036 13.5 0.0 0.38 10.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein DUF815 PF05673.13 gi|15678269|ref|NP_275384.1| - 0.037 13.2 0.0 0.11 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) SRP54 PF00448.22 gi|15678269|ref|NP_275384.1| - 0.051 13.2 0.0 0.49 10.0 0.0 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain T2SSE PF00437.20 gi|15678269|ref|NP_275384.1| - 0.064 12.3 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein PhoH PF02562.16 gi|15678269|ref|NP_275384.1| - 0.077 12.4 0.0 0.49 9.8 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein DUF3400 PF11880.8 gi|15678269|ref|NP_275384.1| - 0.1 12.2 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) Sigma54_activ_2 PF14532.6 gi|15678269|ref|NP_275384.1| - 0.14 12.3 0.0 0.65 10.1 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 gi|15678269|ref|NP_275384.1| - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|15678269|ref|NP_275384.1| - 0.16 11.6 0.0 0.5 10.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain Terminase_6 PF03237.15 gi|15678269|ref|NP_275384.1| - 0.2 11.3 0.1 7.7 6.1 0.0 2.7 2 1 1 3 3 3 0 Terminase-like family TPR_14 PF13428.6 gi|15678269|ref|NP_275384.1| - 0.89 10.5 3.7 1.7 9.6 0.1 3.1 4 0 0 4 4 2 0 Tetratricopeptide repeat Shikimate_dh_N PF08501.11 gi|15678270|ref|NP_275385.1| - 1.5e-23 82.8 0.0 3.2e-23 81.8 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|15678270|ref|NP_275385.1| - 6.5e-15 54.6 0.0 1.2e-14 53.7 0.0 1.5 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|15678270|ref|NP_275385.1| - 2.6e-11 43.7 0.0 7.6e-11 42.2 0.0 1.7 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|15678270|ref|NP_275385.1| - 0.00027 20.3 0.0 0.00042 19.7 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|15678270|ref|NP_275385.1| - 0.00031 21.3 0.0 0.00069 20.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|15678270|ref|NP_275385.1| - 0.0028 17.9 0.0 0.0063 16.8 0.0 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain FAD_binding_2 PF00890.24 gi|15678270|ref|NP_275385.1| - 0.011 14.9 0.2 0.016 14.3 0.2 1.3 1 0 0 1 1 1 0 FAD binding domain OCD_Mu_crystall PF02423.15 gi|15678270|ref|NP_275385.1| - 0.016 14.2 0.0 0.02 13.8 0.0 1.1 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family ApbA PF02558.16 gi|15678270|ref|NP_275385.1| - 0.053 13.2 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Staph_opine_DH PF10100.9 gi|15678270|ref|NP_275385.1| - 0.07 11.8 0.0 0.093 11.4 0.0 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase DUF1188 PF06690.11 gi|15678270|ref|NP_275385.1| - 0.13 11.8 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) ThiF PF00899.21 gi|15678270|ref|NP_275385.1| - 0.15 11.4 0.1 0.31 10.4 0.1 1.5 1 0 0 1 1 1 0 ThiF family PIN_5 PF08745.11 gi|15678271|ref|NP_275386.1| - 2.1e-87 291.9 0.1 2.3e-87 291.7 0.1 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease tRNA-synt_His PF13393.6 gi|15678272|ref|NP_275387.1| - 3.1e-69 233.6 0.0 4.4e-69 233.1 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|15678272|ref|NP_275387.1| - 1.7e-19 69.8 0.2 3.5e-19 68.8 0.2 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|15678272|ref|NP_275387.1| - 5.3e-17 62.4 0.0 1.5e-16 60.8 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|15678272|ref|NP_275387.1| - 1.1e-05 24.7 5.1 0.00073 18.7 1.4 2.6 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|15678272|ref|NP_275387.1| - 0.00038 20.0 0.2 0.001 18.6 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) HGTP_anticodon2 PF12745.7 gi|15678272|ref|NP_275387.1| - 0.00053 19.6 0.0 0.00078 19.0 0.0 1.2 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs PRA-CH PF01502.18 gi|15678273|ref|NP_275388.1| - 9.5e-36 121.5 0.6 1.8e-35 120.6 0.3 1.6 2 0 0 2 2 2 1 Phosphoribosyl-AMP cyclohydrolase FIST_C PF10442.9 gi|15678273|ref|NP_275388.1| - 0.056 13.4 0.0 0.07 13.1 0.0 1.3 1 1 0 1 1 1 0 FIST C domain PIN PF01850.21 gi|15678274|ref|NP_275389.1| - 9.2e-11 42.3 0.0 3.1e-10 40.6 0.0 2.0 1 0 0 1 1 1 1 PIN domain T2SSE PF00437.20 gi|15678274|ref|NP_275389.1| - 1.3e-09 37.6 0.2 2.4e-09 36.6 0.2 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|15678274|ref|NP_275389.1| - 1.2e-06 28.3 0.5 3.7e-06 26.7 0.5 1.9 1 0 0 1 1 1 1 KH domain AAA_16 PF13191.6 gi|15678274|ref|NP_275389.1| - 0.00074 19.9 0.0 0.0015 18.9 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain KH_2 PF07650.17 gi|15678274|ref|NP_275389.1| - 0.0016 18.3 2.0 0.0059 16.4 2.0 2.0 1 0 0 1 1 1 1 KH domain Thymidylate_kin PF02223.17 gi|15678274|ref|NP_275389.1| - 0.0018 18.0 0.0 0.0064 16.2 0.0 2.0 1 1 0 1 1 1 1 Thymidylate kinase Zeta_toxin PF06414.12 gi|15678274|ref|NP_275389.1| - 0.0037 16.6 0.0 0.0087 15.4 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|15678274|ref|NP_275389.1| - 0.0063 16.8 0.0 0.25 11.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|15678274|ref|NP_275389.1| - 0.012 16.2 0.0 0.043 14.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|15678274|ref|NP_275389.1| - 0.016 14.9 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_30 PF13604.6 gi|15678274|ref|NP_275389.1| - 0.026 14.2 0.1 0.088 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|15678274|ref|NP_275389.1| - 0.03 14.3 0.0 0.098 12.7 0.0 2.0 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) Sigma54_activ_2 PF14532.6 gi|15678274|ref|NP_275389.1| - 0.032 14.3 0.0 0.065 13.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA PF00004.29 gi|15678274|ref|NP_275389.1| - 0.036 14.5 0.0 0.09 13.2 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|15678274|ref|NP_275389.1| - 0.04 13.7 0.0 0.11 12.3 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|15678274|ref|NP_275389.1| - 0.042 14.4 0.0 0.1 13.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter KH_4 PF13083.6 gi|15678274|ref|NP_275389.1| - 0.044 13.7 0.1 0.22 11.5 0.1 2.2 1 0 0 1 1 1 0 KH domain TsaE PF02367.17 gi|15678274|ref|NP_275389.1| - 0.061 13.3 0.0 0.39 10.7 0.0 2.2 2 1 1 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RuvB_N PF05496.12 gi|15678274|ref|NP_275389.1| - 0.063 13.0 0.0 0.17 11.6 0.0 1.7 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain MeaB PF03308.16 gi|15678274|ref|NP_275389.1| - 0.066 12.2 0.0 0.15 11.0 0.0 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 gi|15678274|ref|NP_275389.1| - 0.067 13.4 0.2 0.16 12.1 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 gi|15678274|ref|NP_275389.1| - 0.072 12.7 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|15678274|ref|NP_275389.1| - 0.085 11.8 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain DnaB_C PF03796.15 gi|15678274|ref|NP_275389.1| - 0.094 12.0 0.0 0.21 10.9 0.0 1.6 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|15678274|ref|NP_275389.1| - 0.13 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RsgA_GTPase PF03193.16 gi|15678274|ref|NP_275389.1| - 0.15 11.9 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ATP_bind_1 PF03029.17 gi|15678274|ref|NP_275389.1| - 0.16 11.7 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Viral_helicase1 PF01443.18 gi|15678274|ref|NP_275389.1| - 0.18 11.5 0.0 1.2 8.8 0.0 2.0 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AP_endonuc_2 PF01261.24 gi|15678275|ref|NP_275390.1| - 2.6e-17 63.0 0.1 3.6e-17 62.5 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel F420_oxidored PF03807.17 gi|15678276|ref|NP_275391.1| - 6.3e-18 65.2 1.9 6.3e-18 65.2 1.9 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|15678276|ref|NP_275391.1| - 9.9e-06 25.2 1.4 5.5e-05 22.8 0.9 2.1 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|15678276|ref|NP_275391.1| - 0.00087 19.5 0.6 0.0013 18.9 0.4 1.5 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|15678276|ref|NP_275391.1| - 0.0027 17.4 0.3 0.005 16.5 0.3 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Semialdhyde_dh PF01118.24 gi|15678276|ref|NP_275391.1| - 0.006 17.0 0.8 0.02 15.4 0.3 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain PDH PF02153.17 gi|15678276|ref|NP_275391.1| - 0.0061 15.6 0.4 0.011 14.7 0.4 1.4 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|15678276|ref|NP_275391.1| - 0.025 14.5 0.8 0.088 12.8 0.8 1.8 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|15678276|ref|NP_275391.1| - 0.035 14.0 0.5 0.07 13.0 0.5 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short PF00106.25 gi|15678276|ref|NP_275391.1| - 0.06 12.8 2.5 0.2 11.1 0.6 2.1 2 0 0 2 2 2 0 short chain dehydrogenase NmrA PF05368.13 gi|15678276|ref|NP_275391.1| - 0.23 11.0 2.2 0.31 10.6 1.2 1.8 2 0 0 2 2 2 0 NmrA-like family SIS PF01380.22 gi|15678277|ref|NP_275392.1| - 1.3e-19 70.4 0.0 1.9e-19 69.8 0.0 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|15678277|ref|NP_275392.1| - 3.2e-07 30.5 2.9 0.00023 21.2 0.2 2.1 1 1 1 2 2 2 2 SIS domain 2-Hacid_dh_C PF02826.19 gi|15678277|ref|NP_275392.1| - 0.025 13.9 0.1 0.057 12.8 0.1 1.5 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain tRNA_int_endo PF01974.17 gi|15678278|ref|NP_275393.1| - 1.7e-31 108.1 0.4 3.1e-31 107.3 0.4 1.4 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|15678278|ref|NP_275393.1| - 2.3e-20 72.0 0.2 5.4e-20 70.8 0.2 1.7 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|15678278|ref|NP_275393.1| - 0.0022 18.1 0.1 0.0094 16.1 0.0 2.1 2 0 0 2 2 2 1 tRNA-splicing endonuclease subunit sen54 N-term tRNA-synt_1b PF00579.25 gi|15678279|ref|NP_275394.1| - 1.7e-58 198.3 0.0 1.9e-58 198.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) SpoIIM PF01944.17 gi|15678280|ref|NP_275395.1| - 1e-24 87.3 14.8 1.4e-24 86.9 14.8 1.2 1 0 0 1 1 1 1 Stage II sporulation protein M DUF872 PF05915.12 gi|15678280|ref|NP_275395.1| - 0.66 10.2 5.3 0.67 10.1 0.1 2.9 2 1 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) PALP PF00291.25 gi|15678281|ref|NP_275396.1| - 9.7e-77 258.3 1.0 1.2e-76 258.0 1.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme C1_2 PF03107.16 gi|15678281|ref|NP_275396.1| - 0.034 14.4 2.4 0.064 13.6 2.4 1.3 1 0 0 1 1 1 0 C1 domain FYVE PF01363.21 gi|15678281|ref|NP_275396.1| - 0.054 13.6 0.1 0.083 13.0 0.1 1.3 1 0 0 1 1 1 0 FYVE zinc finger DZR PF12773.7 gi|15678281|ref|NP_275396.1| - 0.23 11.5 0.6 0.46 10.6 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|15678281|ref|NP_275396.1| - 0.29 11.2 1.5 0.54 10.3 1.5 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|15678281|ref|NP_275396.1| - 5.3 6.6 8.6 1.8 8.1 5.3 2.0 2 0 0 2 2 2 0 TFIIB zinc-binding CBFD_NFYB_HMF PF00808.23 gi|15678282|ref|NP_275397.1| - 4.8e-19 68.4 0.9 5.4e-19 68.2 0.9 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|15678282|ref|NP_275397.1| - 4.3e-10 40.1 0.1 4.8e-10 39.9 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.17 gi|15678282|ref|NP_275397.1| - 4e-07 30.1 0.3 4.3e-07 30.0 0.3 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T_C PF15511.6 gi|15678282|ref|NP_275397.1| - 1.3e-06 28.5 0.0 1.4e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 gi|15678282|ref|NP_275397.1| - 3.3e-05 24.2 0.0 3.5e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TFIID_20kDa PF03847.13 gi|15678282|ref|NP_275397.1| - 7.3e-05 23.2 0.1 8.4e-05 23.0 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 gi|15678282|ref|NP_275397.1| - 0.0028 17.6 0.0 0.0033 17.4 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TFIID-31kDa PF02291.15 gi|15678282|ref|NP_275397.1| - 0.0062 16.6 0.0 0.0067 16.5 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DUF1931 PF09123.11 gi|15678282|ref|NP_275397.1| - 0.055 13.6 0.3 0.061 13.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) Ribosomal_L7Ae PF01248.26 gi|15678283|ref|NP_275398.1| - 5.4e-29 99.8 0.2 7.1e-29 99.4 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|15678283|ref|NP_275398.1| - 0.0008 19.2 0.1 0.0012 18.7 0.1 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain DUF1269 PF06897.12 gi|15678283|ref|NP_275398.1| - 0.0016 18.7 0.8 0.78 10.1 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1269) eRF1_3 PF03465.15 gi|15678283|ref|NP_275398.1| - 0.0019 18.6 0.2 0.003 18.0 0.1 1.5 1 1 0 1 1 1 1 eRF1 domain 3 RNase_P_pop3 PF08228.11 gi|15678283|ref|NP_275398.1| - 0.0048 17.0 0.0 0.0054 16.8 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 Ldh_2 PF02615.14 gi|15678283|ref|NP_275398.1| - 0.062 12.4 0.1 0.071 12.3 0.1 1.1 1 0 0 1 1 1 0 Malate/L-lactate dehydrogenase Ribosomal_S28e PF01200.18 gi|15678284|ref|NP_275399.1| - 4.9e-32 109.7 1.1 5.3e-32 109.6 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 gi|15678285|ref|NP_275400.1| - 9e-21 73.9 2.4 9.4e-21 73.8 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.13 gi|15678285|ref|NP_275400.1| - 9.5e-06 25.6 1.3 1.3e-05 25.2 1.3 1.1 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|15678285|ref|NP_275400.1| - 0.00012 22.0 2.5 0.00015 21.6 2.5 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-FLZ PF04570.14 gi|15678285|ref|NP_275400.1| - 0.00097 18.6 1.9 0.0015 18.0 1.9 1.3 1 1 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 VATC PF18716.1 gi|15678285|ref|NP_275400.1| - 0.21 11.5 6.9 0.57 10.1 6.9 1.7 1 1 0 1 1 1 0 Vms1-associating treble clef domain NDK PF00334.19 gi|15678286|ref|NP_275401.1| - 3.1e-57 192.4 0.0 3.5e-57 192.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GTP_EFTU PF00009.27 gi|15678287|ref|NP_275402.1| - 1.2e-35 122.9 0.0 3.6e-35 121.3 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|15678287|ref|NP_275402.1| - 1.9e-30 104.6 0.2 4.7e-30 103.3 0.2 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|15678287|ref|NP_275402.1| - 1.3e-19 70.3 2.6 1.3e-19 70.3 2.6 2.2 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|15678287|ref|NP_275402.1| - 2.8e-13 50.1 7.3 3.5e-11 43.3 0.1 3.6 3 0 0 3 3 3 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15678287|ref|NP_275402.1| - 8.8e-08 32.2 0.0 2.4e-07 30.8 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|15678287|ref|NP_275402.1| - 0.00067 19.5 0.0 0.0019 18.0 0.0 1.8 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 gi|15678287|ref|NP_275402.1| - 0.0067 16.5 0.0 0.15 12.1 0.0 2.6 2 0 0 2 2 2 1 Dynamin family Big_8 PF17961.1 gi|15678287|ref|NP_275402.1| - 0.082 13.1 0.0 0.28 11.4 0.0 1.9 1 0 0 1 1 1 0 Bacterial Ig domain Ras PF00071.22 gi|15678287|ref|NP_275402.1| - 0.088 12.4 0.0 0.28 10.8 0.0 1.8 2 0 0 2 2 2 0 Ras family Ribosomal_S6e PF01092.19 gi|15678288|ref|NP_275403.1| - 1.3e-44 151.2 0.3 1.5e-44 151.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e eIF2_C PF09173.11 gi|15678289|ref|NP_275404.1| - 2.6e-34 117.3 0.1 6.5e-34 116.1 0.1 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 gi|15678289|ref|NP_275404.1| - 9.3e-31 106.9 1.8 9.9e-30 103.5 1.8 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|15678289|ref|NP_275404.1| - 6.3e-10 39.3 1.4 2e-09 37.7 1.4 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|15678289|ref|NP_275404.1| - 9.2e-05 22.4 1.8 0.00065 19.7 0.1 2.4 3 0 0 3 3 3 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|15678289|ref|NP_275404.1| - 0.00023 21.2 0.0 0.00062 19.8 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 gi|15678289|ref|NP_275404.1| - 0.00037 20.3 0.5 0.32 10.7 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 gi|15678289|ref|NP_275404.1| - 0.0053 16.8 0.1 0.012 15.7 0.1 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PolC_DP2 PF03833.13 gi|15678289|ref|NP_275404.1| - 0.0076 14.2 0.2 0.01 13.7 0.2 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 MeaB PF03308.16 gi|15678289|ref|NP_275404.1| - 0.018 14.0 1.2 0.046 12.7 0.1 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DZR PF12773.7 gi|15678289|ref|NP_275404.1| - 0.025 14.6 0.7 0.052 13.6 0.7 1.4 1 0 0 1 1 1 0 Double zinc ribbon cobW PF02492.19 gi|15678289|ref|NP_275404.1| - 0.035 13.7 0.4 0.2 11.2 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Nop10p PF04135.12 gi|15678289|ref|NP_275404.1| - 0.1 12.6 1.7 0.22 11.6 1.7 1.5 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family FeoB_N PF02421.18 gi|15678289|ref|NP_275404.1| - 0.12 11.9 0.3 16 5.0 0.0 2.5 3 0 0 3 3 3 0 Ferrous iron transport protein B G-alpha PF00503.20 gi|15678289|ref|NP_275404.1| - 0.23 10.6 0.1 0.45 9.6 0.0 1.4 2 0 0 2 2 2 0 G-protein alpha subunit zinc_ribbon_2 PF13240.6 gi|15678289|ref|NP_275404.1| - 2.3 8.1 5.4 4.5 7.1 5.4 1.5 1 0 0 1 1 1 0 zinc-ribbon domain PIN_9 PF18477.1 gi|15678290|ref|NP_275405.1| - 1.1e-26 93.4 0.0 1.3e-26 93.2 0.0 1.0 1 0 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|15678290|ref|NP_275405.1| - 2.3e-05 24.7 0.0 0.12 12.7 0.0 2.1 1 1 1 2 2 2 2 PIN domain Fcf1 PF04900.12 gi|15678290|ref|NP_275405.1| - 0.0076 16.6 0.0 0.0092 16.4 0.0 1.4 1 1 0 1 1 1 1 Fcf1 Pyrophosphatase PF00719.19 gi|15678291|ref|NP_275406.1| - 2.2e-55 186.8 0.0 2.5e-55 186.6 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase SHS2_Rpb7-N PF03876.17 gi|15678292|ref|NP_275407.1| - 7.9e-18 64.6 0.1 1.3e-17 63.9 0.1 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|15678292|ref|NP_275407.1| - 1.5e-14 54.1 0.3 3.3e-14 53.0 0.3 1.6 1 0 0 1 1 1 1 S1 RNA binding domain Spt4 PF06093.13 gi|15678293|ref|NP_275408.1| - 7.8e-15 54.7 0.7 1.6e-14 53.7 0.7 1.5 1 1 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.15 gi|15678293|ref|NP_275408.1| - 0.0063 16.1 3.1 0.0088 15.6 3.1 1.2 1 0 0 1 1 1 1 RecR protein zf-P11 PF03854.14 gi|15678293|ref|NP_275408.1| - 0.09 12.5 1.4 0.14 11.8 1.4 1.3 1 0 0 1 1 1 0 P-11 zinc finger Med27 PF11571.8 gi|15678293|ref|NP_275408.1| - 0.14 12.6 1.0 0.17 12.2 1.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 27 zn-ribbon_14 PF16503.5 gi|15678293|ref|NP_275408.1| - 0.25 10.9 2.3 0.49 10.0 2.3 1.5 1 1 0 1 1 1 0 Zinc-ribbon Auto_anti-p27 PF06677.12 gi|15678293|ref|NP_275408.1| - 0.35 11.1 3.1 2 8.7 0.3 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF359 PF04019.12 gi|15678294|ref|NP_275409.1| - 2.7e-37 127.2 0.0 3.3e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S24e PF01282.19 gi|15678295|ref|NP_275410.1| - 3.2e-25 87.9 0.2 4.2e-25 87.5 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S27 PF01599.19 gi|15678296|ref|NP_275411.1| - 1e-17 64.0 3.8 1.2e-17 63.8 3.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Ribosomal_L37e PF01907.19 gi|15678296|ref|NP_275411.1| - 0.0035 17.5 1.4 0.0045 17.1 1.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e NCD3G PF07562.14 gi|15678296|ref|NP_275411.1| - 0.021 14.8 0.3 0.027 14.4 0.3 1.1 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR zinc_ribbon_4 PF13717.6 gi|15678296|ref|NP_275411.1| - 0.021 14.7 0.8 1.1 9.3 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_4 PF15227.6 gi|15678296|ref|NP_275411.1| - 0.033 14.4 0.4 0.043 14.0 0.4 1.2 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Nudix_N_2 PF14803.6 gi|15678296|ref|NP_275411.1| - 0.27 11.2 4.6 1.2 9.1 4.6 1.9 1 1 0 1 1 1 0 Nudix N-terminal RNA_POL_M_15KD PF02150.16 gi|15678296|ref|NP_275411.1| - 0.43 10.5 5.7 2 8.4 4.9 2.2 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit Lyase_1 PF00206.20 gi|15678297|ref|NP_275412.1| - 1.6e-70 238.0 0.3 1.9e-70 237.7 0.3 1.1 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|15678297|ref|NP_275412.1| - 3.4e-18 66.2 0.0 1.6e-17 64.0 0.0 2.3 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Peptidase_M24 PF00557.24 gi|15678297|ref|NP_275412.1| - 0.041 13.6 0.1 0.088 12.5 0.1 1.6 1 0 0 1 1 1 0 Metallopeptidase family M24 GM_CSF PF01109.17 gi|15678297|ref|NP_275412.1| - 0.19 11.9 0.0 0.36 11.0 0.0 1.4 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor DUF3096 PF11295.8 gi|15678298|ref|NP_275413.1| - 1.9e-05 24.2 14.0 2.4e-05 23.9 14.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3096) SLATT_6 PF18169.1 gi|15678298|ref|NP_275413.1| - 0.0036 16.9 1.9 0.004 16.8 1.9 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 6 DUF308 PF03729.13 gi|15678298|ref|NP_275413.1| - 0.028 14.7 12.8 0.053 13.9 12.8 1.4 1 1 0 1 1 1 0 Short repeat of unknown function (DUF308) Flp_Fap PF04964.14 gi|15678298|ref|NP_275413.1| - 0.22 11.4 2.8 0.22 11.4 2.1 1.4 1 1 0 1 1 1 0 Flp/Fap pilin component DUF202 PF02656.15 gi|15678298|ref|NP_275413.1| - 0.31 11.5 3.6 0.39 11.2 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF202) DUF5362 PF17319.2 gi|15678298|ref|NP_275413.1| - 0.39 10.6 10.1 0.79 9.6 10.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5362) PGPGW PF09656.10 gi|15678298|ref|NP_275413.1| - 3.6 7.2 14.2 0.38 10.3 4.7 2.0 1 1 1 2 2 2 0 Putative transmembrane protein (PGPGW) tRNA_Me_trans PF03054.16 gi|15678299|ref|NP_275414.1| - 0.026 13.3 0.1 0.042 12.6 0.1 1.3 1 0 0 1 1 1 0 tRNA methyl transferase Hexapep PF00132.24 gi|15678300|ref|NP_275415.1| - 6.3e-32 108.1 20.5 2.7e-09 36.4 0.4 4.2 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|15678300|ref|NP_275415.1| - 2.2e-16 59.3 6.2 1e-05 25.2 0.1 4.3 4 0 0 4 4 4 4 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|15678300|ref|NP_275415.1| - 0.037 14.3 0.3 0.24 11.7 0.1 2.0 2 0 0 2 2 2 0 Polymer-forming cytoskeletal PBP PF01161.20 gi|15678301|ref|NP_275416.1| - 3.6e-39 134.1 0.0 4.3e-39 133.8 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein AAA_16 PF13191.6 gi|15678302|ref|NP_275417.1| - 0.0036 17.7 0.0 0.012 16.1 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15678302|ref|NP_275417.1| - 0.022 15.0 0.0 0.039 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain UbiA PF01040.18 gi|15678303|ref|NP_275418.1| - 6e-17 61.8 1.4 6e-17 61.8 1.4 2.3 1 1 1 2 2 2 1 UbiA prenyltransferase family DUF2628 PF10947.8 gi|15678304|ref|NP_275419.1| - 0.09 13.1 3.6 0.13 12.6 3.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Peptidase_U4 PF03419.13 gi|15678304|ref|NP_275419.1| - 0.16 11.2 4.5 0.17 11.2 4.5 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF2304 PF10066.9 gi|15678304|ref|NP_275419.1| - 8.7 6.6 9.9 1.5 9.1 1.9 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) FAD_binding_3 PF01494.19 gi|15678305|ref|NP_275420.1| - 6e-17 61.9 0.4 1.4e-13 50.8 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|15678305|ref|NP_275420.1| - 7e-09 35.7 2.1 0.00045 19.9 1.4 2.9 2 1 1 3 3 3 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|15678305|ref|NP_275420.1| - 1.9e-08 33.8 0.1 0.00017 20.8 0.3 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|15678305|ref|NP_275420.1| - 2.7e-08 33.1 0.2 4.2e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.7 gi|15678305|ref|NP_275420.1| - 3.8e-06 26.5 5.4 2.8e-05 23.7 5.3 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|15678305|ref|NP_275420.1| - 4.2e-06 25.7 1.9 6.9e-06 25.0 0.6 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|15678305|ref|NP_275420.1| - 6.3e-06 25.6 0.7 1.5e-05 24.4 0.7 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15678305|ref|NP_275420.1| - 6.4e-06 26.3 0.1 3.7e-05 23.9 0.2 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|15678305|ref|NP_275420.1| - 1.3e-05 24.5 1.3 1.3e-05 24.5 1.3 1.7 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|15678305|ref|NP_275420.1| - 0.00026 20.2 1.4 0.00026 20.2 1.4 1.9 2 0 0 2 2 1 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|15678305|ref|NP_275420.1| - 0.0009 18.6 0.8 0.0019 17.5 0.8 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|15678305|ref|NP_275420.1| - 0.0048 16.2 1.6 0.0099 15.1 0.8 1.9 3 0 0 3 3 3 1 Thi4 family NAD_binding_7 PF13241.6 gi|15678305|ref|NP_275420.1| - 0.022 15.2 0.0 0.047 14.1 0.1 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|15678305|ref|NP_275420.1| - 0.038 13.9 0.6 0.15 12.0 0.1 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|15678305|ref|NP_275420.1| - 0.039 13.2 0.7 0.13 11.5 0.6 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|15678306|ref|NP_275421.1| - 9e-13 47.5 10.9 2.7e-06 27.0 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15678306|ref|NP_275421.1| - 5e-09 36.1 10.1 1e-08 35.1 10.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678306|ref|NP_275421.1| - 2.3e-08 34.1 23.1 9.1e-06 25.7 12.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678306|ref|NP_275421.1| - 3e-08 34.5 9.8 0.00077 20.3 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|15678306|ref|NP_275421.1| - 3.2e-08 34.0 22.3 1e-06 29.2 11.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678306|ref|NP_275421.1| - 3.1e-06 27.2 13.0 0.00021 21.3 13.6 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678306|ref|NP_275421.1| - 2.9e-05 23.9 10.5 0.00077 19.4 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678306|ref|NP_275421.1| - 0.00014 22.3 10.6 0.019 15.5 1.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678306|ref|NP_275421.1| - 0.00051 20.4 10.2 0.11 12.9 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15678306|ref|NP_275421.1| - 0.0015 18.7 10.8 0.015 15.5 2.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678306|ref|NP_275421.1| - 0.0025 18.6 18.1 0.056 14.4 4.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15678306|ref|NP_275421.1| - 0.0052 17.2 13.4 0.069 13.7 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678306|ref|NP_275421.1| - 0.0059 16.6 13.9 0.023 14.8 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678306|ref|NP_275421.1| - 0.086 13.4 10.2 1.9 9.1 0.5 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|15678306|ref|NP_275421.1| - 0.95 10.3 12.8 2.5 9.0 1.9 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain PsbP PF01789.16 gi|15678307|ref|NP_275422.1| - 0.059 13.5 0.6 0.084 13.0 0.6 1.3 1 1 0 1 1 1 0 PsbP NIR_SIR PF01077.22 gi|15678308|ref|NP_275423.1| - 3.7e-35 120.8 0.0 5.7e-35 120.2 0.0 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain FrhB_FdhB_C PF04432.13 gi|15678308|ref|NP_275423.1| - 8e-32 110.2 0.0 2e-31 108.9 0.0 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|15678308|ref|NP_275423.1| - 4.1e-17 62.1 0.1 3.1e-16 59.3 0.0 2.3 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|15678308|ref|NP_275423.1| - 4.9e-14 51.5 40.0 6.3e-06 25.8 1.1 5.8 5 0 0 5 5 5 3 4Fe-4S binding domain NIR_SIR_ferr PF03460.17 gi|15678308|ref|NP_275423.1| - 1.1e-10 41.1 0.0 3.6e-10 39.5 0.0 1.9 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4_7 PF12838.7 gi|15678308|ref|NP_275423.1| - 6.7e-08 33.0 35.0 1.8e-05 25.2 12.3 4.7 3 2 2 5 5 5 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678308|ref|NP_275423.1| - 7.2e-08 32.2 45.0 0.00012 22.0 1.8 5.9 6 0 0 6 6 5 3 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678308|ref|NP_275423.1| - 8.4e-08 32.2 30.4 0.00057 20.0 12.7 4.9 3 2 1 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678308|ref|NP_275423.1| - 1.4e-07 31.5 33.7 5e-07 29.8 10.4 4.3 4 1 1 5 5 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678308|ref|NP_275423.1| - 1.8e-07 30.8 36.2 0.0017 18.3 1.8 5.9 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678308|ref|NP_275423.1| - 2.8e-07 30.9 20.6 0.33 11.4 1.6 5.3 4 1 2 6 6 6 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678308|ref|NP_275423.1| - 3.3e-05 23.9 31.9 0.00018 21.6 11.6 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678308|ref|NP_275423.1| - 7.5e-05 23.6 33.2 0.0053 17.7 0.6 5.5 5 1 1 6 6 5 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|15678308|ref|NP_275423.1| - 0.00014 22.4 26.7 0.074 13.6 1.7 5.5 4 1 1 5 5 5 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678308|ref|NP_275423.1| - 0.00043 20.6 38.6 0.005 17.3 1.8 5.5 6 0 0 6 6 5 3 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15678308|ref|NP_275423.1| - 0.047 14.5 1.4 0.047 14.5 1.4 4.1 4 1 0 4 4 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15678308|ref|NP_275423.1| - 0.22 11.8 14.6 1.8 8.8 0.6 3.3 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15678308|ref|NP_275423.1| - 0.62 10.7 0.1 0.62 10.7 0.1 5.3 6 0 0 6 6 6 0 4Fe-4S single cluster domain of Ferredoxin I PadR PF03551.14 gi|15678309|ref|NP_275424.1| - 2.6e-23 81.8 0.6 3.4e-23 81.4 0.6 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HxlR PF01638.17 gi|15678309|ref|NP_275424.1| - 0.0034 17.2 0.1 0.0047 16.7 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix RTP PF02334.16 gi|15678309|ref|NP_275424.1| - 0.015 16.0 0.0 0.022 15.4 0.0 1.3 1 0 0 1 1 1 0 Replication terminator protein HTH_34 PF13601.6 gi|15678309|ref|NP_275424.1| - 0.02 15.0 0.0 0.026 14.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF505 PF04458.12 gi|15678309|ref|NP_275424.1| - 0.049 12.0 0.1 0.056 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF505) MarR PF01047.22 gi|15678309|ref|NP_275424.1| - 0.051 13.5 0.0 0.11 12.4 0.0 1.6 1 1 0 1 1 1 0 MarR family HEAT_2 PF13646.6 gi|15678310|ref|NP_275425.1| - 4.3e-09 36.6 0.1 7.9e-09 35.8 0.1 1.4 1 0 0 1 1 1 1 HEAT repeats HEAT PF02985.22 gi|15678310|ref|NP_275425.1| - 0.00019 21.4 0.0 0.88 10.0 0.0 2.6 2 0 0 2 2 2 2 HEAT repeat HEAT_PBS PF03130.16 gi|15678310|ref|NP_275425.1| - 0.0016 18.9 1.3 0.0053 17.3 0.6 2.3 2 0 0 2 2 2 1 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|15678310|ref|NP_275425.1| - 0.025 15.1 0.2 3.9 8.1 0.0 2.4 1 1 1 2 2 2 0 HEAT-like repeat Sec5 PF15469.6 gi|15678311|ref|NP_275426.1| - 0.033 14.0 0.1 0.053 13.3 0.1 1.3 1 0 0 1 1 1 0 Exocyst complex component Sec5 DegS PF05384.11 gi|15678311|ref|NP_275426.1| - 0.052 13.0 6.2 0.15 11.5 0.3 2.3 1 1 1 2 2 2 0 Sensor protein DegS RuBisCO_large PF00016.20 gi|15678311|ref|NP_275426.1| - 0.12 11.5 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain DMPK_coil PF08826.10 gi|15678311|ref|NP_275426.1| - 0.41 10.8 3.7 16 5.7 0.3 3.0 2 0 0 2 2 2 0 DMPK coiled coil domain like AAA_2 PF07724.14 gi|15678312|ref|NP_275427.1| - 2.7e-42 144.8 0.1 6e-42 143.7 0.1 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 gi|15678312|ref|NP_275427.1| - 6.1e-11 42.9 0.1 4.1e-08 33.7 0.0 2.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|15678312|ref|NP_275427.1| - 2.7e-10 40.4 0.0 1.6e-09 37.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|15678312|ref|NP_275427.1| - 1.3e-06 28.3 0.0 2.1e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_14 PF13173.6 gi|15678312|ref|NP_275427.1| - 5.7e-06 26.4 0.9 0.00059 19.9 0.0 3.7 3 1 1 4 4 4 1 AAA domain ResIII PF04851.15 gi|15678312|ref|NP_275427.1| - 9e-05 22.5 0.0 0.00035 20.6 0.0 2.0 2 0 0 2 2 1 1 Type III restriction enzyme, res subunit AAA_24 PF13479.6 gi|15678312|ref|NP_275427.1| - 0.0019 18.0 0.1 0.0055 16.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15678312|ref|NP_275427.1| - 0.0028 18.1 0.1 0.015 15.7 0.1 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15678312|ref|NP_275427.1| - 0.0028 17.9 0.5 0.18 12.1 0.2 3.3 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|15678312|ref|NP_275427.1| - 0.0045 16.3 0.0 0.01 15.1 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin Mg_chelatase PF01078.21 gi|15678312|ref|NP_275427.1| - 0.0061 16.0 0.0 0.42 10.0 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI DNA_pol3_delta2 PF13177.6 gi|15678312|ref|NP_275427.1| - 0.012 15.4 0.8 2.8 7.7 0.0 3.3 3 1 0 3 3 3 0 DNA polymerase III, delta subunit ClpB_D2-small PF10431.9 gi|15678312|ref|NP_275427.1| - 0.015 15.4 0.0 0.083 13.0 0.0 2.3 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein AAA_7 PF12775.7 gi|15678312|ref|NP_275427.1| - 0.02 14.4 0.0 0.064 12.8 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|15678312|ref|NP_275427.1| - 0.038 14.4 0.1 0.22 11.9 0.1 2.3 1 1 0 1 1 1 0 RNA helicase AAA_3 PF07726.11 gi|15678312|ref|NP_275427.1| - 0.04 13.8 0.0 0.16 11.8 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|15678312|ref|NP_275427.1| - 0.053 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Torsin PF06309.11 gi|15678312|ref|NP_275427.1| - 0.06 13.5 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Torsin PIF1 PF05970.14 gi|15678312|ref|NP_275427.1| - 0.092 11.9 0.1 0.22 10.7 0.1 1.6 1 0 0 1 1 1 0 PIF1-like helicase NACHT PF05729.12 gi|15678312|ref|NP_275427.1| - 0.13 12.2 0.0 0.71 9.8 0.0 2.2 2 0 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 gi|15678312|ref|NP_275427.1| - 2 8.3 5.9 1.8 8.4 0.0 3.2 4 1 0 4 4 4 0 ATPase domain predominantly from Archaea zf-ribbon_3 PF13248.6 gi|15678313|ref|NP_275428.1| - 0.04 13.3 1.0 0.078 12.4 1.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Fer4_12 PF13353.6 gi|15678315|ref|NP_275430.1| - 5e-31 107.8 0.0 6.4e-31 107.5 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15678315|ref|NP_275430.1| - 3.4e-14 53.0 0.0 4.7e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|15678315|ref|NP_275430.1| - 1e-09 39.0 0.2 1.4e-09 38.6 0.2 1.3 1 1 0 1 1 1 1 Radical SAM superfamily Pox_A32 PF04665.12 gi|15678316|ref|NP_275431.1| - 0.0025 17.3 0.0 0.0044 16.5 0.0 1.3 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_7 PF12775.7 gi|15678316|ref|NP_275431.1| - 0.08 12.4 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Pes-10 PF07149.11 gi|15678317|ref|NP_275432.1| - 0.12 11.4 0.6 0.18 10.8 0.6 1.2 1 0 0 1 1 1 0 Pes-10 FtsH_ext PF06480.15 gi|15678318|ref|NP_275433.1| - 0.1 13.0 0.3 0.13 12.6 0.3 1.2 1 0 0 1 1 1 0 FtsH Extracellular T2SSM PF04612.12 gi|15678319|ref|NP_275434.1| - 0.055 13.5 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M EF1G PF00647.19 gi|15678319|ref|NP_275434.1| - 0.085 12.9 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain HisKA_2 PF07568.12 gi|15678320|ref|NP_275435.1| - 3.5e-20 71.9 1.2 3.5e-20 71.9 1.2 2.0 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 gi|15678320|ref|NP_275435.1| - 3.2e-09 37.3 0.6 1.4e-07 31.9 0.2 2.7 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|15678320|ref|NP_275435.1| - 1.7e-06 28.0 0.0 3.7e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|15678320|ref|NP_275435.1| - 9.9e-05 23.0 0.2 0.00021 21.9 0.2 1.6 1 0 0 1 1 1 1 HWE histidine kinase PAS PF00989.25 gi|15678320|ref|NP_275435.1| - 0.012 15.6 0.0 0.028 14.4 0.0 1.7 1 0 0 1 1 1 0 PAS fold PAS_8 PF13188.7 gi|15678320|ref|NP_275435.1| - 0.079 13.0 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 PAS domain DUF3040 PF11239.8 gi|15678321|ref|NP_275436.1| - 0.016 15.4 0.1 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) CoA_binding_3 PF13727.6 gi|15678321|ref|NP_275436.1| - 0.028 14.5 2.0 0.041 13.9 2.0 1.3 1 0 0 1 1 1 0 CoA-binding domain BatA PF07584.11 gi|15678321|ref|NP_275436.1| - 0.87 10.0 8.8 1.5 9.2 0.3 2.7 1 1 1 2 2 2 0 Aerotolerance regulator N-terminal UbiA PF01040.18 gi|15678321|ref|NP_275436.1| - 3 7.1 11.7 0.36 10.1 3.6 2.0 1 1 1 2 2 2 0 UbiA prenyltransferase family Radical_SAM PF04055.21 gi|15678322|ref|NP_275437.1| - 0.11 12.9 0.3 0.18 12.2 0.3 1.4 1 0 0 1 1 1 0 Radical SAM superfamily zf-ribbon_3 PF13248.6 gi|15678322|ref|NP_275437.1| - 0.12 11.8 1.2 0.22 11.0 0.2 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 gi|15678322|ref|NP_275437.1| - 0.27 11.8 2.4 0.41 11.2 1.7 1.7 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zinc_ribbon_2 PF13240.6 gi|15678322|ref|NP_275437.1| - 0.33 10.7 1.7 0.4 10.5 0.3 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Vps36_ESCRT-II PF11605.8 gi|15678324|ref|NP_275439.1| - 0.00011 22.3 0.1 0.34 11.1 0.1 2.4 2 0 0 2 2 2 2 Vacuolar protein sorting protein 36 Vps36 zinc_ribbon_4 PF13717.6 gi|15678324|ref|NP_275439.1| - 0.021 14.7 0.2 0.021 14.7 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|15678324|ref|NP_275439.1| - 0.13 12.7 0.1 0.25 11.7 0.1 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_12 PF11331.8 gi|15678324|ref|NP_275439.1| - 0.22 11.4 0.6 0.47 10.3 0.6 1.5 1 0 0 1 1 1 0 Probable zinc-ribbon domain Phlebovirus_NSM PF07246.11 gi|15678324|ref|NP_275439.1| - 0.28 10.5 1.9 0.2 11.0 0.2 1.5 2 0 0 2 2 2 0 Phlebovirus nonstructural protein NS-M RNA_pol_Rpb1_1 PF04997.12 gi|15678325|ref|NP_275440.1| - 2e-35 122.6 0.0 2.1e-35 122.5 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 Rpr2 PF04032.16 gi|15678325|ref|NP_275440.1| - 0.066 13.5 0.6 0.084 13.2 0.0 1.4 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF2688 PF10892.8 gi|15678325|ref|NP_275440.1| - 0.14 11.7 1.0 9 5.8 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) zf-CCHC PF00098.23 gi|15678325|ref|NP_275440.1| - 1.7 8.9 7.0 11 6.3 0.3 3.0 3 0 0 3 3 3 0 Zinc knuckle RNA_pol_Rpb1_1 PF04997.12 gi|15678326|ref|NP_275441.1| - 5.3e-13 49.0 0.1 5.4e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|15678327|ref|NP_275442.1| - 6e-74 247.8 0.1 8.7e-74 247.3 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_1 PF04997.12 gi|15678327|ref|NP_275442.1| - 4.8e-32 111.5 0.4 9e-32 110.6 0.4 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_3 PF04983.18 gi|15678327|ref|NP_275442.1| - 1.7e-30 106.0 0.0 3e-30 105.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|15678327|ref|NP_275442.1| - 1.5e-26 92.5 0.0 2.7e-26 91.6 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|15678327|ref|NP_275442.1| - 3.3e-26 92.3 0.0 5.5e-26 91.6 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF3659 PF12396.8 gi|15678327|ref|NP_275442.1| - 0.19 11.7 0.6 0.54 10.2 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) PMBR PF09373.10 gi|15678329|ref|NP_275444.1| - 8.9e-18 63.5 0.0 3.8e-08 33.1 0.0 3.3 3 0 0 3 3 3 2 Pseudomurein-binding repeat FlgD_ig PF13860.6 gi|15678330|ref|NP_275445.1| - 0.0014 18.4 0.4 0.0027 17.5 0.4 1.4 1 0 0 1 1 1 1 FlgD Ig-like domain PepSY PF03413.19 gi|15678330|ref|NP_275445.1| - 0.03 14.9 2.1 0.1 13.2 2.1 2.1 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain PUA_3 PF17785.1 gi|15678330|ref|NP_275445.1| - 0.096 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 PUA-like domain Peptidase_M28 PF04389.17 gi|15678331|ref|NP_275446.1| - 1e-15 58.0 0.0 1.3e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 gi|15678331|ref|NP_275446.1| - 0.012 15.3 0.0 0.024 14.3 0.0 1.8 2 1 0 2 2 2 0 Peptidase family M20/M25/M40 DUF86 PF01934.17 gi|15678332|ref|NP_275447.1| - 7e-24 84.0 0.0 9e-24 83.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 NPV_P10 PF05531.12 gi|15678332|ref|NP_275447.1| - 0.019 15.4 0.0 3.2 8.3 0.0 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein SHOCT PF09851.9 gi|15678332|ref|NP_275447.1| - 0.033 13.9 0.9 0.078 12.7 0.1 2.0 2 0 0 2 2 2 0 Short C-terminal domain Polbeta PF18765.1 gi|15678333|ref|NP_275448.1| - 3e-13 49.7 0.2 3.9e-13 49.3 0.2 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15678333|ref|NP_275448.1| - 1.2e-05 25.6 0.2 1.3e-05 25.4 0.2 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF3247 PF11607.8 gi|15678333|ref|NP_275448.1| - 0.075 13.3 0.0 0.11 12.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3247) NurA PF09376.10 gi|15678334|ref|NP_275449.1| - 4e-37 128.2 0.0 4.8e-37 128.0 0.0 1.1 1 0 0 1 1 1 1 NurA domain Glyco_trans_4_4 PF13579.6 gi|15678334|ref|NP_275449.1| - 0.11 12.9 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain DUF87 PF01935.17 gi|15678335|ref|NP_275450.1| - 2e-48 165.4 0.3 3.2e-48 164.8 0.3 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|15678335|ref|NP_275450.1| - 5.3e-15 55.3 1.4 2e-14 53.5 1.4 2.0 1 0 0 1 1 1 1 HAS barrel domain DUF853 PF05872.12 gi|15678335|ref|NP_275450.1| - 3.5e-09 35.8 0.2 3.7e-05 22.5 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|15678335|ref|NP_275450.1| - 0.00048 19.2 0.2 0.0012 17.8 0.1 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.7 gi|15678335|ref|NP_275450.1| - 0.0025 16.8 0.0 1.9 7.3 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain T4SS-DNA_transf PF02534.14 gi|15678335|ref|NP_275450.1| - 0.0029 16.5 0.0 0.0049 15.7 0.0 1.3 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer FtsK_SpoIIIE PF01580.18 gi|15678335|ref|NP_275450.1| - 0.11 11.9 0.0 0.4 10.0 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF1232 PF06803.12 gi|15678336|ref|NP_275451.1| - 1.2e-09 37.8 3.8 1.8e-09 37.2 3.4 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1232) Stc1 PF12898.7 gi|15678337|ref|NP_275452.1| - 0.018 15.6 0.2 0.018 15.6 0.2 4.5 4 0 0 4 4 4 0 Stc1 domain zf-ribbon_3 PF13248.6 gi|15678337|ref|NP_275452.1| - 0.029 13.8 10.1 1 8.9 3.9 4.0 3 0 0 3 3 3 0 zinc-ribbon domain EVE PF01878.18 gi|15678338|ref|NP_275453.1| - 0.003 17.6 0.0 0.0044 17.0 0.0 1.2 1 0 0 1 1 1 1 EVE domain DUF2791 PF10923.8 gi|15678339|ref|NP_275454.1| - 7e-104 347.9 0.0 8.4e-104 347.7 0.0 1.0 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) AAA_22 PF13401.6 gi|15678339|ref|NP_275454.1| - 4e-07 30.4 0.0 0.0094 16.2 0.0 2.3 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|15678339|ref|NP_275454.1| - 1.6e-06 28.6 0.0 1e-05 26.0 0.0 2.2 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|15678339|ref|NP_275454.1| - 0.0014 18.6 0.8 0.034 14.0 0.8 2.3 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 gi|15678339|ref|NP_275454.1| - 0.017 14.4 0.0 0.032 13.5 0.0 1.6 2 0 0 2 2 2 0 KAP family P-loop domain DAP3 PF10236.9 gi|15678339|ref|NP_275454.1| - 0.14 11.3 0.0 0.7 9.0 0.0 2.1 3 0 0 3 3 3 0 Mitochondrial ribosomal death-associated protein 3 DEAD PF00270.29 gi|15678340|ref|NP_275455.1| - 1.8e-34 119.0 0.0 1.6e-31 109.4 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15678340|ref|NP_275455.1| - 8.7e-20 71.1 0.3 1.1e-18 67.5 0.7 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15678340|ref|NP_275455.1| - 2.9e-08 33.9 0.0 1.4e-07 31.7 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit MarR PF01047.22 gi|15678341|ref|NP_275456.1| - 9.8e-20 70.2 0.0 1.5e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15678341|ref|NP_275456.1| - 3.7e-13 49.1 0.2 6.1e-13 48.4 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15678341|ref|NP_275456.1| - 2.4e-08 34.3 0.1 4.6e-08 33.4 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|15678341|ref|NP_275456.1| - 3.9e-07 29.5 0.0 7.5e-07 28.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HxlR PF01638.17 gi|15678341|ref|NP_275456.1| - 3.2e-06 26.9 0.4 9.7e-06 25.3 0.2 1.7 1 1 1 2 2 2 1 HxlR-like helix-turn-helix TrmB PF01978.19 gi|15678341|ref|NP_275456.1| - 6.3e-06 26.0 0.0 1.2e-05 25.1 0.0 1.4 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|15678341|ref|NP_275456.1| - 1.9e-05 24.5 0.0 3.6e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_Crp_2 PF13545.6 gi|15678341|ref|NP_275456.1| - 9.3e-05 22.3 0.3 0.00086 19.2 0.3 2.3 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 gi|15678341|ref|NP_275456.1| - 0.00023 20.8 0.0 0.0005 19.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MerR PF00376.23 gi|15678341|ref|NP_275456.1| - 0.00047 19.9 0.1 0.001 18.8 0.1 1.7 1 0 0 1 1 1 1 MerR family regulatory protein HTH_11 PF08279.12 gi|15678341|ref|NP_275456.1| - 0.00062 19.7 0.1 0.0016 18.3 0.0 1.7 2 0 0 2 2 2 1 HTH domain HTH_34 PF13601.6 gi|15678341|ref|NP_275456.1| - 0.0014 18.7 0.0 0.003 17.7 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.12 gi|15678341|ref|NP_275456.1| - 0.0025 17.9 0.0 0.0044 17.2 0.0 1.4 2 0 0 2 2 1 1 B-block binding subunit of TFIIIC HTH_23 PF13384.6 gi|15678341|ref|NP_275456.1| - 0.0037 17.0 0.0 0.0081 15.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_20 PF12840.7 gi|15678341|ref|NP_275456.1| - 0.0073 16.3 0.5 0.015 15.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain Replic_Relax PF13814.6 gi|15678341|ref|NP_275456.1| - 0.014 15.5 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation Fe_dep_repress PF01325.19 gi|15678341|ref|NP_275456.1| - 0.021 15.0 0.0 0.043 14.0 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.6 gi|15678341|ref|NP_275456.1| - 0.023 14.6 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|15678341|ref|NP_275456.1| - 0.026 14.9 0.0 0.042 14.2 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor SMC_ScpB PF04079.16 gi|15678341|ref|NP_275456.1| - 0.033 13.8 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB DUF3116 PF11313.8 gi|15678341|ref|NP_275456.1| - 0.048 13.5 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) HTH_IclR PF09339.10 gi|15678341|ref|NP_275456.1| - 0.048 13.5 0.0 0.087 12.6 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF4423 PF14394.6 gi|15678341|ref|NP_275456.1| - 0.11 12.2 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_Tnp_4 PF13613.6 gi|15678341|ref|NP_275456.1| - 0.12 12.1 0.1 2.7 7.8 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix of DDE superfamily endonuclease Rrf2 PF02082.20 gi|15678341|ref|NP_275456.1| - 0.18 12.1 0.0 0.31 11.4 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator MatE PF01554.18 gi|15678342|ref|NP_275457.1| - 1.1e-61 207.2 43.9 3.9e-33 114.4 10.1 2.4 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|15678342|ref|NP_275457.1| - 4.3e-07 30.1 24.8 4.3e-07 30.1 24.8 5.0 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Otopetrin PF03189.13 gi|15678342|ref|NP_275457.1| - 0.022 13.6 2.4 0.037 12.8 2.4 1.3 1 0 0 1 1 1 0 Otopetrin DUF1270 PF06900.11 gi|15678342|ref|NP_275457.1| - 0.036 14.4 1.1 0.036 14.4 1.1 2.9 4 0 0 4 4 4 0 Protein of unknown function (DUF1270) DUF4325 PF14213.6 gi|15678344|ref|NP_275459.1| - 1.4e-05 24.7 0.3 2.5e-05 23.9 0.3 1.5 1 0 0 1 1 1 1 STAS-like domain of unknown function (DUF4325) CobN-Mg_chel PF02514.16 gi|15678345|ref|NP_275460.1| - 4.2e-194 647.3 0.0 1.2e-193 645.9 0.0 1.6 1 1 0 1 1 1 1 CobN/Magnesium Chelatase CobN-Mg_chel PF02514.16 gi|15678346|ref|NP_275461.1| - 5.4e-71 239.7 0.0 6.7e-71 239.4 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase QSregVF_b PF12843.7 gi|15678348|ref|NP_275463.1| - 0.095 12.6 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor PHD_like PF12910.7 gi|15678349|ref|NP_275464.1| - 0.0045 17.0 0.0 0.0062 16.6 0.0 1.3 1 1 0 1 1 1 1 Antitoxin of toxin-antitoxin, RelE / RelB, TA system RAMPs PF03787.15 gi|15678351|ref|NP_275466.1| - 1.2 9.1 4.9 5.4 7.0 4.9 2.0 1 1 0 1 1 1 0 RAMP superfamily RAMPs PF03787.15 gi|15678353|ref|NP_275468.1| - 6e-29 101.6 1.6 8e-29 101.2 1.6 1.2 1 0 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 gi|15678353|ref|NP_275468.1| - 0.011 15.1 0.0 0.024 14.1 0.0 1.5 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Cmr3) HD PF01966.22 gi|15678354|ref|NP_275469.1| - 0.0012 19.1 0.5 0.0088 16.3 0.1 2.7 2 0 0 2 2 2 1 HD domain GTA_TIM PF13547.6 gi|15678354|ref|NP_275469.1| - 0.14 11.4 0.5 0.95 8.7 0.0 2.1 2 0 0 2 2 2 0 GTA TIM-barrel-like domain DNTTIP1_dimer PF18192.1 gi|15678354|ref|NP_275469.1| - 0.68 10.3 3.6 0.52 10.7 0.3 2.5 2 0 0 2 2 2 0 DNTTIP1 dimerisation domain RAMPs PF03787.15 gi|15678355|ref|NP_275470.1| - 3e-08 34.0 0.4 8.6e-08 32.5 0.4 1.7 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 gi|15678356|ref|NP_275471.1| - 2e-08 34.5 0.1 1.9e-06 28.1 0.0 2.2 1 1 1 2 2 2 2 RAMP superfamily Glyco_tranf_2_5 PF13712.6 gi|15678357|ref|NP_275472.1| - 9.6e-08 32.0 0.0 3.4e-06 26.9 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family Glycos_transf_2 PF00535.26 gi|15678357|ref|NP_275472.1| - 0.016 15.0 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 C5-epim_C PF06662.13 gi|15678358|ref|NP_275473.1| - 2.6e-50 170.5 4.3 2.6e-50 170.5 4.3 1.7 2 0 0 2 2 2 1 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_127 PF07944.12 gi|15678358|ref|NP_275473.1| - 0.061 11.8 7.2 1.8 7.0 2.8 2.7 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Glycos_transf_2 PF00535.26 gi|15678359|ref|NP_275474.1| - 4.5e-29 101.4 0.1 1.6e-28 99.7 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678359|ref|NP_275474.1| - 4.1e-12 46.5 0.0 4.5e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Bmp PF02608.14 gi|15678359|ref|NP_275474.1| - 0.0088 15.0 0.0 0.022 13.7 0.0 1.4 1 1 1 2 2 2 1 ABC transporter substrate-binding protein PnrA-like Glyco_transf_21 PF13506.6 gi|15678359|ref|NP_275474.1| - 0.036 13.5 0.0 0.059 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|15678359|ref|NP_275474.1| - 0.051 14.1 0.0 0.13 12.7 0.0 1.8 1 1 0 1 1 1 0 Glycosyl transferase family 2 YflT PF11181.8 gi|15678359|ref|NP_275474.1| - 0.13 12.7 0.0 0.25 11.9 0.0 1.4 1 0 0 1 1 1 0 Heat induced stress protein YflT Glycos_transf_1 PF00534.20 gi|15678360|ref|NP_275475.1| - 1.7e-37 128.6 0.1 2.3e-37 128.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678360|ref|NP_275475.1| - 5e-31 107.9 0.0 8.1e-31 107.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678360|ref|NP_275475.1| - 1.8e-17 63.8 0.0 5.5e-16 59.0 0.0 2.2 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678360|ref|NP_275475.1| - 7.7e-11 42.7 0.0 7.4e-10 39.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678360|ref|NP_275475.1| - 3.9e-05 24.0 0.0 6.9e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|15678360|ref|NP_275475.1| - 0.0023 18.0 0.0 0.0095 16.0 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like DUF1995 PF09353.10 gi|15678360|ref|NP_275475.1| - 0.069 13.2 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) AAA_26 PF13500.6 gi|15678360|ref|NP_275475.1| - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain GDP_Man_Dehyd PF16363.5 gi|15678361|ref|NP_275476.1| - 1.1e-120 403.1 0.0 1.3e-120 402.8 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|15678361|ref|NP_275476.1| - 4.3e-64 216.3 0.0 5.3e-64 216.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|15678361|ref|NP_275476.1| - 1.9e-06 27.2 0.0 2.7e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Amidohydro_1 PF01979.20 gi|15678361|ref|NP_275476.1| - 0.13 11.5 0.0 0.24 10.7 0.0 1.3 1 1 0 1 1 1 0 Amidohydrolase family NmrA PF05368.13 gi|15678361|ref|NP_275476.1| - 0.21 11.1 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family DegT_DnrJ_EryC1 PF01041.17 gi|15678362|ref|NP_275477.1| - 6.3e-136 453.4 0.0 7.1e-136 453.3 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|15678362|ref|NP_275477.1| - 2.6e-08 33.4 0.0 3.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15678362|ref|NP_275477.1| - 0.00018 20.6 0.0 0.00026 20.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Phage_Coat_A PF05357.13 gi|15678362|ref|NP_275477.1| - 0.16 11.8 0.0 0.36 10.6 0.0 1.6 1 0 0 1 1 1 0 Phage Coat Protein A Glycos_transf_1 PF00534.20 gi|15678363|ref|NP_275478.1| - 1.4e-37 128.8 0.0 2.2e-37 128.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678363|ref|NP_275478.1| - 2.8e-28 99.0 0.0 3.9e-28 98.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678363|ref|NP_275478.1| - 2.3e-12 47.2 0.0 6.3e-12 45.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678363|ref|NP_275478.1| - 6.9e-05 23.3 0.0 0.00015 22.2 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678363|ref|NP_275478.1| - 0.00019 21.8 0.0 0.00034 21.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_hydro_18 PF00704.28 gi|15678363|ref|NP_275478.1| - 0.01 15.6 0.2 0.017 14.8 0.2 1.3 1 1 0 1 1 1 1 Glycosyl hydrolases family 18 Acetyltransf_1 PF00583.25 gi|15678364|ref|NP_275479.1| - 3.3e-16 59.6 0.1 4e-16 59.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15678364|ref|NP_275479.1| - 2e-14 53.6 0.0 2.8e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15678364|ref|NP_275479.1| - 3.1e-11 43.5 0.1 4.3e-11 43.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15678364|ref|NP_275479.1| - 2.8e-09 36.8 0.0 4.1e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|15678364|ref|NP_275479.1| - 3.8e-09 36.9 0.4 6.2e-09 36.2 0.4 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15678364|ref|NP_275479.1| - 6.9e-08 33.3 0.1 9e-08 32.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|15678364|ref|NP_275479.1| - 0.0054 16.3 0.0 0.0075 15.9 0.0 1.2 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_8 PF13523.6 gi|15678364|ref|NP_275479.1| - 0.0068 16.1 0.0 0.0096 15.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15678364|ref|NP_275479.1| - 0.021 14.9 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain YbjQ_1 PF01906.17 gi|15678364|ref|NP_275479.1| - 0.025 15.2 0.1 0.038 14.6 0.1 1.3 1 0 0 1 1 1 0 Putative heavy-metal-binding Acetyltransf_CG PF14542.6 gi|15678364|ref|NP_275479.1| - 0.029 14.5 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_18 PF18014.1 gi|15678364|ref|NP_275479.1| - 0.08 12.8 0.0 2 8.3 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF3800 PF12686.7 gi|15678365|ref|NP_275480.1| - 0.49 11.0 11.9 0.24 12.1 9.6 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3800) Glycos_transf_1 PF00534.20 gi|15678366|ref|NP_275481.1| - 2.1e-31 108.7 0.0 4.4e-31 107.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678366|ref|NP_275481.1| - 2.9e-23 82.8 0.0 8e-23 81.3 0.0 1.8 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678366|ref|NP_275481.1| - 1.5e-09 38.1 0.0 1e-08 35.4 0.0 2.3 3 1 0 3 3 3 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678366|ref|NP_275481.1| - 5.2e-06 27.0 0.0 7.6e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678366|ref|NP_275481.1| - 0.0002 21.7 0.0 0.00036 20.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|15678366|ref|NP_275481.1| - 0.004 17.2 0.0 0.01 15.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like PIGA PF08288.12 gi|15678366|ref|NP_275481.1| - 0.014 16.0 0.1 0.052 14.1 0.1 2.0 1 1 0 1 1 1 0 PIGA (GPI anchor biosynthesis) DUF2206 PF09971.9 gi|15678367|ref|NP_275482.1| - 2.2e-101 339.3 9.3 2.2e-101 339.3 9.3 2.6 2 1 0 2 2 2 1 Predicted membrane protein (DUF2206) Citrate_bind PF16114.5 gi|15678367|ref|NP_275482.1| - 0.068 12.7 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding PS_pyruv_trans PF04230.13 gi|15678368|ref|NP_275483.1| - 3.8e-43 148.4 1.7 5.1e-43 148.0 1.7 1.2 1 0 0 1 1 1 1 Polysaccharide pyruvyl transferase UPF0158 PF03682.13 gi|15678368|ref|NP_275483.1| - 0.14 12.1 1.9 0.88 9.5 0.3 2.4 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0158) FrhB_FdhB_C PF04432.13 gi|15678369|ref|NP_275484.1| - 1.5e-33 115.8 0.0 2.4e-33 115.2 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|15678369|ref|NP_275484.1| - 1.8e-26 92.1 0.0 2.9e-26 91.4 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_10 PF13237.6 gi|15678369|ref|NP_275484.1| - 8.2e-07 29.0 6.7 8.2e-07 29.0 6.7 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678369|ref|NP_275484.1| - 1e-06 28.8 6.5 1e-06 28.8 6.5 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678369|ref|NP_275484.1| - 6.2e-06 26.2 12.1 5.7e-05 23.2 12.0 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678369|ref|NP_275484.1| - 1.1e-05 25.9 9.2 1.1e-05 25.9 9.2 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678369|ref|NP_275484.1| - 0.00025 20.7 26.0 0.00085 19.0 3.7 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15678369|ref|NP_275484.1| - 0.00034 20.9 13.9 0.059 13.9 1.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678369|ref|NP_275484.1| - 0.001 19.1 19.2 0.039 14.1 3.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678369|ref|NP_275484.1| - 0.0024 18.3 9.5 0.28 11.6 11.0 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678369|ref|NP_275484.1| - 0.0034 17.4 20.1 0.15 12.2 2.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678369|ref|NP_275484.1| - 0.0048 17.4 11.0 0.079 13.5 0.5 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15678369|ref|NP_275484.1| - 0.023 15.2 9.5 1.3 9.6 2.8 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15678369|ref|NP_275484.1| - 0.66 10.8 13.1 5 7.9 2.8 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15678369|ref|NP_275484.1| - 1.7 9.5 10.9 4 8.4 2.4 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678369|ref|NP_275484.1| - 7.9 7.5 20.6 1.7 9.6 3.4 2.8 2 1 1 4 4 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|15678369|ref|NP_275484.1| - 9.3 6.5 10.9 3.4 7.9 2.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Polysacc_synt PF01943.17 gi|15678370|ref|NP_275485.1| - 3.7e-67 226.6 32.6 3.7e-67 226.6 32.6 2.7 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|15678370|ref|NP_275485.1| - 9.4e-24 84.1 16.6 9.4e-24 84.1 16.6 2.1 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|15678370|ref|NP_275485.1| - 5.3e-23 81.7 15.9 5.3e-23 81.7 15.9 3.7 2 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|15678370|ref|NP_275485.1| - 1.7e-07 30.3 32.7 1.7e-07 30.3 32.7 2.1 1 1 1 2 2 2 1 Lipid II flippase MurJ Glycos_transf_2 PF00535.26 gi|15678371|ref|NP_275486.1| - 1.6e-29 102.9 0.0 2.6e-29 102.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678371|ref|NP_275486.1| - 1.3e-12 48.1 0.0 6.3e-12 45.9 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|15678371|ref|NP_275486.1| - 2.1e-05 24.5 0.0 6.3e-05 23.0 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|15678371|ref|NP_275486.1| - 0.00014 22.3 0.0 0.00043 20.7 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|15678371|ref|NP_275486.1| - 0.18 11.2 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 GLF PF03275.13 gi|15678372|ref|NP_275487.1| - 4.8e-75 251.8 0.5 6.1e-75 251.4 0.5 1.1 1 0 0 1 1 1 1 UDP-galactopyranose mutase NAD_binding_8 PF13450.6 gi|15678372|ref|NP_275487.1| - 4.1e-16 59.0 0.2 8e-16 58.0 0.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|15678372|ref|NP_275487.1| - 0.00013 21.5 0.1 0.00047 19.6 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|15678372|ref|NP_275487.1| - 0.00024 21.1 0.0 0.00056 19.9 0.0 1.6 1 0 0 1 1 1 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 gi|15678372|ref|NP_275487.1| - 0.0012 18.0 0.4 0.033 13.3 0.4 2.1 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 gi|15678372|ref|NP_275487.1| - 0.002 17.8 0.2 0.0034 17.0 0.1 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|15678372|ref|NP_275487.1| - 0.002 17.5 0.1 0.0036 16.7 0.1 1.6 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 gi|15678372|ref|NP_275487.1| - 0.0023 18.4 0.2 0.011 16.2 0.3 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|15678372|ref|NP_275487.1| - 0.0024 17.2 0.0 0.0037 16.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15678372|ref|NP_275487.1| - 0.029 13.4 0.1 0.068 12.2 0.1 1.5 2 0 0 2 2 2 0 Lycopene cyclase protein HI0933_like PF03486.14 gi|15678372|ref|NP_275487.1| - 0.029 13.1 0.2 0.043 12.5 0.2 1.2 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 gi|15678372|ref|NP_275487.1| - 0.071 12.3 0.0 0.15 11.2 0.0 1.5 2 0 0 2 2 2 0 Thi4 family GMC_oxred_N PF00732.19 gi|15678372|ref|NP_275487.1| - 0.078 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase FAD_binding_3 PF01494.19 gi|15678372|ref|NP_275487.1| - 0.12 11.6 0.5 0.19 10.9 0.5 1.2 1 0 0 1 1 1 0 FAD binding domain AlaDh_PNT_C PF01262.21 gi|15678372|ref|NP_275487.1| - 0.25 10.6 0.1 0.43 9.8 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Radical_SAM PF04055.21 gi|15678373|ref|NP_275488.1| - 8.7e-23 81.5 0.0 1.4e-22 80.8 0.0 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15678373|ref|NP_275488.1| - 2.7e-12 47.1 1.5 1.2e-11 45.0 0.4 2.5 2 2 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15678373|ref|NP_275488.1| - 0.00014 22.0 5.7 0.032 14.4 0.1 2.8 2 1 1 3 3 3 1 4Fe-4S single cluster domain Fer4 PF00037.27 gi|15678373|ref|NP_275488.1| - 0.0021 17.8 3.0 0.0021 17.8 3.0 2.5 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678373|ref|NP_275488.1| - 0.003 17.6 1.1 0.003 17.6 1.1 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678373|ref|NP_275488.1| - 0.026 14.6 1.2 0.026 14.6 1.2 2.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678373|ref|NP_275488.1| - 0.17 12.0 13.3 6.8 6.9 12.4 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678373|ref|NP_275488.1| - 0.25 12.0 12.9 1.1 9.9 10.0 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678373|ref|NP_275488.1| - 0.68 10.1 12.7 1.6 9.0 9.9 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain PFL-like PF02901.15 gi|15678374|ref|NP_275489.1| - 9e-57 193.1 0.0 7.6e-55 186.7 0.0 2.8 1 1 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 gi|15678374|ref|NP_275489.1| - 2.3e-11 44.2 0.0 1.5e-10 41.6 0.0 2.3 2 0 0 2 2 2 1 Glycine radical DUF3029 PF11230.8 gi|15678374|ref|NP_275489.1| - 6.3e-06 24.8 0.0 4.7e-05 22.0 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3029) Polysacc_synt PF01943.17 gi|15678375|ref|NP_275490.1| - 4.1e-80 269.1 40.6 2.9e-78 263.0 23.6 2.0 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|15678375|ref|NP_275490.1| - 7e-24 84.6 12.1 7e-24 84.6 12.1 1.8 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|15678375|ref|NP_275490.1| - 3.2e-05 24.0 12.3 3.2e-05 24.0 12.3 4.5 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Glycos_transf_2 PF00535.26 gi|15678376|ref|NP_275491.1| - 4.2e-39 134.1 0.3 1.4e-26 93.3 0.0 2.3 1 1 1 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678376|ref|NP_275491.1| - 1.9e-16 60.7 0.0 3.5e-16 59.8 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|15678376|ref|NP_275491.1| - 0.00089 19.7 0.0 0.0027 18.2 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|15678376|ref|NP_275491.1| - 0.0043 17.0 0.0 0.0071 16.3 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|15678376|ref|NP_275491.1| - 0.019 14.5 0.0 0.045 13.2 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 21 Glyc_hyd_38C_2 PF18230.1 gi|15678377|ref|NP_275492.1| - 0.18 12.0 0.0 0.35 11.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain YdjM PF04307.14 gi|15678378|ref|NP_275493.1| - 2.1e-12 46.7 8.1 2.3e-11 43.3 8.1 2.2 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|15678378|ref|NP_275493.1| - 0.055 13.5 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 Zinc dependent phospholipase C CobN-Mg_chel PF02514.16 gi|15678379|ref|NP_275494.1| - 2.3e-258 860.2 0.0 1.2e-201 672.3 0.0 2.2 2 0 0 2 2 2 2 CobN/Magnesium Chelatase Podoplanin PF05808.11 gi|15678379|ref|NP_275494.1| - 0.041 14.0 1.9 0.095 12.8 1.9 1.6 1 0 0 1 1 1 0 Podoplanin Cupin_2 PF07883.11 gi|15678380|ref|NP_275495.1| - 5.7e-15 54.8 0.1 7.6e-15 54.4 0.1 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|15678380|ref|NP_275495.1| - 1.1e-06 28.3 0.0 1.4e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Cupin MannoseP_isomer PF01050.18 gi|15678380|ref|NP_275495.1| - 1.7e-06 28.0 0.0 2.1e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|15678380|ref|NP_275495.1| - 2.2e-05 24.4 0.0 2.7e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Ectoine_synth PF06339.12 gi|15678380|ref|NP_275495.1| - 2.3e-05 24.6 0.0 3.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Ectoine synthase CENP-C_C PF11699.8 gi|15678380|ref|NP_275495.1| - 3.4e-05 24.0 0.0 4.6e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_3 PF05899.12 gi|15678380|ref|NP_275495.1| - 0.00047 19.8 0.0 0.00064 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 gi|15678380|ref|NP_275495.1| - 0.0011 18.7 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding_2 PF14525.6 gi|15678380|ref|NP_275495.1| - 0.02 14.6 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain GPI PF06560.11 gi|15678380|ref|NP_275495.1| - 0.12 11.7 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DUF2749 PF10907.8 gi|15678381|ref|NP_275496.1| - 0.54 10.5 2.9 0.33 11.1 0.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) PsbY PF06298.11 gi|15678381|ref|NP_275496.1| - 0.56 10.2 4.8 1 9.3 4.8 1.4 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) Chlorophyllase2 PF12740.7 gi|15678382|ref|NP_275497.1| - 2.1e-09 36.7 0.0 4.1e-09 35.7 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_6 PF12697.7 gi|15678382|ref|NP_275497.1| - 3.3e-06 27.8 0.3 4.4e-06 27.5 0.3 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Chlorophyllase PF07224.11 gi|15678382|ref|NP_275497.1| - 3.9e-06 26.1 0.0 7.8e-06 25.1 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase Abhydrolase_5 PF12695.7 gi|15678382|ref|NP_275497.1| - 0.00027 20.7 0.0 0.00042 20.1 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 gi|15678382|ref|NP_275497.1| - 0.0027 17.6 0.0 0.0039 17.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|15678382|ref|NP_275497.1| - 0.061 12.6 0.0 0.64 9.2 0.0 2.2 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Thioesterase PF00975.20 gi|15678382|ref|NP_275497.1| - 0.063 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_1 PF00561.20 gi|15678382|ref|NP_275497.1| - 0.11 12.1 1.0 1 8.9 1.0 2.0 1 1 0 1 1 1 0 alpha/beta hydrolase fold Esterase PF00756.20 gi|15678382|ref|NP_275497.1| - 0.19 11.3 0.9 1.1 8.9 0.9 2.0 1 1 0 1 1 1 0 Putative esterase HisKA_2 PF07568.12 gi|15678384|ref|NP_275499.1| - 1.7e-26 92.1 1.4 4e-26 90.9 1.4 1.7 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.26 gi|15678384|ref|NP_275499.1| - 7.1e-09 36.2 0.1 3e-07 30.9 0.0 2.6 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|15678384|ref|NP_275499.1| - 2.2e-07 31.5 0.2 4.4e-07 30.5 0.2 1.5 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|15678384|ref|NP_275499.1| - 1.3e-06 28.4 0.0 6.4e-06 26.1 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|15678384|ref|NP_275499.1| - 0.019 15.0 0.0 0.053 13.6 0.0 1.8 1 0 0 1 1 1 0 PAS domain PAS PF00989.25 gi|15678384|ref|NP_275499.1| - 0.064 13.3 0.0 0.17 11.9 0.0 1.7 1 0 0 1 1 1 0 PAS fold PAS_4 PF08448.10 gi|15678384|ref|NP_275499.1| - 0.16 12.3 0.0 4.5 7.6 0.0 2.4 2 0 0 2 2 2 0 PAS fold TMEM239 PF15841.5 gi|15678384|ref|NP_275499.1| - 2.8 7.8 7.4 0.34 10.8 1.3 2.3 2 0 0 2 2 2 0 Transmembrane protein 239 family PMBR PF09373.10 gi|15678385|ref|NP_275500.1| - 3.2e-31 106.0 0.4 7.5e-09 35.3 0.1 4.5 3 0 0 3 3 3 3 Pseudomurein-binding repeat Transglut_core PF01841.19 gi|15678385|ref|NP_275500.1| - 2e-24 86.2 1.4 2e-24 86.2 1.4 2.8 2 0 0 2 2 2 1 Transglutaminase-like superfamily Peptidase_C71 PF12386.8 gi|15678385|ref|NP_275500.1| - 2.7e-08 33.6 1.2 2.7e-08 33.6 1.2 2.8 3 0 0 3 3 3 1 Pseudomurein endo-isopeptidase Pei DUF4015 PF13200.6 gi|15678385|ref|NP_275500.1| - 3e-06 26.5 0.7 1.2e-05 24.5 0.2 2.2 2 0 0 2 2 2 1 Putative glycosyl hydrolase domain DUF4834 PF16118.5 gi|15678385|ref|NP_275500.1| - 0.13 13.2 0.5 0.31 12.0 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Na_H_Exchanger PF00999.21 gi|15678386|ref|NP_275501.1| - 4e-48 164.1 44.7 5.2e-48 163.7 44.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|15678386|ref|NP_275501.1| - 3.1e-26 91.9 0.4 5e-26 91.2 0.4 1.3 1 0 0 1 1 1 1 TrkA-N domain Epimerase PF01370.21 gi|15678386|ref|NP_275501.1| - 0.012 15.1 0.1 0.017 14.6 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_2 PF03446.15 gi|15678386|ref|NP_275501.1| - 0.019 15.1 0.0 0.039 14.1 0.0 1.5 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|15678386|ref|NP_275501.1| - 0.15 11.4 0.0 0.28 10.5 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMBR PF09373.10 gi|15678387|ref|NP_275502.1| - 8.3e-50 164.7 2.3 3e-10 39.7 1.1 6.6 6 0 0 6 6 6 6 Pseudomurein-binding repeat Transglut_core PF01841.19 gi|15678387|ref|NP_275502.1| - 1.6e-25 89.7 0.8 3.9e-25 88.5 0.8 1.7 1 0 0 1 1 1 1 Transglutaminase-like superfamily Peptidase_C71 PF12386.8 gi|15678387|ref|NP_275502.1| - 4.6e-09 36.1 1.6 7.4e-09 35.4 0.5 1.9 2 0 0 2 2 2 1 Pseudomurein endo-isopeptidase Pei Transglut_core3 PF13471.6 gi|15678387|ref|NP_275502.1| - 0.0088 15.9 0.2 0.033 14.1 0.2 2.0 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 gi|15678387|ref|NP_275502.1| - 0.039 13.5 0.1 0.91 9.0 0.1 2.3 1 1 0 1 1 1 0 Transglutaminase-like domain HisKA_2 PF07568.12 gi|15678388|ref|NP_275503.1| - 2.7e-29 101.1 0.1 6.4e-29 99.9 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.26 gi|15678388|ref|NP_275503.1| - 3.6e-08 33.9 0.0 1.6e-07 31.8 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|15678388|ref|NP_275503.1| - 1.6e-06 28.1 0.0 3.7e-06 26.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HisKA_7TM PF16927.5 gi|15678388|ref|NP_275503.1| - 3e-06 27.4 17.6 4.4e-06 26.9 17.6 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HWE_HK PF07536.14 gi|15678388|ref|NP_275503.1| - 4e-05 24.2 0.0 0.00011 22.9 0.0 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|15678388|ref|NP_275503.1| - 9.6e-05 22.6 0.0 0.00028 21.1 0.0 1.9 1 0 0 1 1 1 1 PAS domain GAF PF01590.26 gi|15678388|ref|NP_275503.1| - 0.00017 22.2 0.0 0.043 14.4 0.0 2.5 1 1 0 1 1 1 1 GAF domain GAF_2 PF13185.6 gi|15678388|ref|NP_275503.1| - 0.00035 20.9 0.0 0.013 15.8 0.0 2.5 1 1 1 2 2 2 1 GAF domain PAS_8 PF13188.7 gi|15678388|ref|NP_275503.1| - 0.0072 16.3 0.0 0.049 13.7 0.0 2.5 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|15678388|ref|NP_275503.1| - 0.072 13.1 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 PAS fold GAF_3 PF13492.6 gi|15678388|ref|NP_275503.1| - 0.072 13.4 0.0 0.46 10.8 0.0 2.2 2 0 0 2 2 2 0 GAF domain SPOB_a PF14689.6 gi|15678388|ref|NP_275503.1| - 0.4 10.4 3.8 0.16 11.7 0.6 2.0 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain Glyphos_transf PF04464.14 gi|15678389|ref|NP_275504.1| - 2.2e-104 349.4 0.0 2.5e-104 349.2 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FNIP_M PF14637.6 gi|15678389|ref|NP_275504.1| - 0.096 12.7 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Folliculin-interacting protein middle domain Glycos_transf_1 PF00534.20 gi|15678390|ref|NP_275505.1| - 2.9e-26 92.0 0.0 9.2e-26 90.4 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678390|ref|NP_275505.1| - 3.5e-20 72.8 0.0 8e-20 71.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678390|ref|NP_275505.1| - 1e-15 58.2 0.4 1.7e-15 57.4 0.4 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678390|ref|NP_275505.1| - 8.8e-10 39.2 1.2 1.9e-09 38.1 1.2 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|15678391|ref|NP_275506.1| - 1.9e-06 28.3 0.1 1.3e-05 25.6 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15678391|ref|NP_275506.1| - 0.00099 19.5 0.0 0.0018 18.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|15678391|ref|NP_275506.1| - 0.0054 16.3 0.1 0.018 14.6 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyphos_transf PF04464.14 gi|15678393|ref|NP_275508.1| - 6.1e-109 364.4 0.0 7e-109 364.2 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Polysacc_synt PF01943.17 gi|15678395|ref|NP_275510.1| - 6.2e-78 261.9 24.6 7e-78 261.8 24.6 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|15678395|ref|NP_275510.1| - 4.1e-05 22.9 11.5 0.0001 21.7 11.5 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF1751 PF08551.10 gi|15678395|ref|NP_275510.1| - 0.01 16.4 3.2 0.01 16.4 3.2 2.7 2 1 1 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) NAD_Gly3P_dh_N PF01210.23 gi|15678396|ref|NP_275511.1| - 1.4e-39 135.6 0.0 2e-39 135.1 0.0 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 gi|15678396|ref|NP_275511.1| - 7.6e-30 104.1 0.1 3.9e-29 101.8 0.0 2.2 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ApbA PF02558.16 gi|15678396|ref|NP_275511.1| - 5.4e-06 26.1 0.0 7.8e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|15678396|ref|NP_275511.1| - 6.1e-06 26.7 0.0 1.3e-05 25.7 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|15678396|ref|NP_275511.1| - 0.0019 18.1 0.1 0.0032 17.4 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 gi|15678396|ref|NP_275511.1| - 0.015 15.2 0.1 0.048 13.5 0.1 1.8 1 1 0 1 1 1 0 Rossmann-like domain Semialdhyde_dh PF01118.24 gi|15678396|ref|NP_275511.1| - 0.057 13.9 0.0 0.1 13.0 0.0 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Glycos_transf_3 PF00591.21 gi|15678396|ref|NP_275511.1| - 0.12 12.0 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family, a/b domain NTP_transf_3 PF12804.7 gi|15678397|ref|NP_275512.1| - 1.5e-13 51.4 0.0 1.8e-13 51.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|15678397|ref|NP_275512.1| - 6.4e-06 26.1 0.1 1.2e-05 25.1 0.1 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UDPGP PF01704.18 gi|15678397|ref|NP_275512.1| - 7.9e-05 21.5 0.1 0.00013 20.8 0.1 1.2 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transferase PF00483.23 gi|15678397|ref|NP_275512.1| - 8.7e-05 22.2 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase DUF5398 PF17376.2 gi|15678397|ref|NP_275512.1| - 0.12 13.0 0.0 0.27 11.9 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5398) Glycos_transf_1 PF00534.20 gi|15678398|ref|NP_275513.1| - 2e-30 105.6 0.0 3.3e-30 104.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678398|ref|NP_275513.1| - 2e-24 86.5 0.0 4.4e-24 85.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678398|ref|NP_275513.1| - 4.7e-20 72.3 1.0 8.1e-20 71.5 1.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678398|ref|NP_275513.1| - 3.4e-16 60.1 0.4 1.7e-15 57.9 0.5 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15678398|ref|NP_275513.1| - 1.4e-05 25.4 0.0 2.8e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Carbam_trans_C PF16861.5 gi|15678398|ref|NP_275513.1| - 0.015 14.9 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus Glyco_trans_4_2 PF13477.6 gi|15678398|ref|NP_275513.1| - 0.021 14.8 0.0 0.047 13.7 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase 4-like PMT_2 PF13231.6 gi|15678399|ref|NP_275514.1| - 1.7e-19 70.6 15.4 1.7e-19 70.6 15.4 1.9 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF1614 PF07758.11 gi|15678399|ref|NP_275514.1| - 4.5 7.2 9.9 0.61 10.1 4.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF1614) OST3_OST6 PF04756.13 gi|15678400|ref|NP_275515.1| - 2 7.7 8.1 2.9 7.1 1.7 2.2 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family Epimerase PF01370.21 gi|15678401|ref|NP_275516.1| - 3.1e-44 151.3 0.2 3.7e-44 151.0 0.2 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15678401|ref|NP_275516.1| - 6.4e-30 104.7 1.6 2.7e-29 102.6 1.6 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|15678401|ref|NP_275516.1| - 1.3e-14 53.9 0.0 2.2e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|15678401|ref|NP_275516.1| - 1.8e-14 53.5 0.0 2.1e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|15678401|ref|NP_275516.1| - 2.8e-14 52.9 0.0 1.4e-10 40.8 0.0 2.3 1 1 1 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|15678401|ref|NP_275516.1| - 7.7e-09 35.1 0.0 3.9e-07 29.5 0.0 2.3 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein adh_short PF00106.25 gi|15678401|ref|NP_275516.1| - 0.004 16.6 0.1 0.044 13.3 0.0 2.3 2 1 0 2 2 2 1 short chain dehydrogenase NAD_binding_10 PF13460.6 gi|15678401|ref|NP_275516.1| - 0.017 15.1 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H-binding NAD_binding_2 PF03446.15 gi|15678401|ref|NP_275516.1| - 0.057 13.6 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase KR PF08659.10 gi|15678401|ref|NP_275516.1| - 0.075 12.9 0.1 0.24 11.3 0.1 1.8 2 1 0 2 2 2 0 KR domain Glycos_transf_2 PF00535.26 gi|15678402|ref|NP_275517.1| - 1.4e-29 103.1 0.1 2e-29 102.6 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678402|ref|NP_275517.1| - 4.6e-10 39.8 0.2 6.3e-10 39.3 0.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15678402|ref|NP_275517.1| - 0.00024 20.7 0.0 0.0003 20.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|15678402|ref|NP_275517.1| - 0.0014 18.2 0.0 0.0024 17.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|15678402|ref|NP_275517.1| - 0.033 14.7 0.1 0.065 13.7 0.1 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Tetradecapep PF08187.11 gi|15678402|ref|NP_275517.1| - 1.5 9.1 4.8 7.7 6.8 1.8 3.1 2 0 0 2 2 2 0 Myoactive tetradecapeptides family Epimerase PF01370.21 gi|15678403|ref|NP_275518.1| - 2.3e-54 184.4 0.0 2.8e-54 184.1 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15678403|ref|NP_275518.1| - 2.8e-51 174.9 0.0 4.1e-51 174.3 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|15678403|ref|NP_275518.1| - 1.5e-14 53.7 0.0 2e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|15678403|ref|NP_275518.1| - 8.9e-13 48.0 0.0 1.3e-10 40.9 0.0 2.0 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|15678403|ref|NP_275518.1| - 1.9e-12 46.9 0.0 2.2e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|15678403|ref|NP_275518.1| - 3.4e-06 27.1 0.0 5.4e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|15678403|ref|NP_275518.1| - 1.8e-05 24.3 0.0 5.2e-05 22.8 0.0 1.7 2 0 0 2 2 2 1 short chain dehydrogenase NAD_binding_4 PF07993.12 gi|15678403|ref|NP_275518.1| - 0.0003 20.1 0.0 0.0018 17.5 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 gi|15678403|ref|NP_275518.1| - 0.00065 19.3 0.0 0.00099 18.7 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family TrkA_N PF02254.18 gi|15678403|ref|NP_275518.1| - 0.0017 18.6 0.0 0.0032 17.7 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain KR PF08659.10 gi|15678403|ref|NP_275518.1| - 0.0037 17.2 0.0 0.0092 15.9 0.0 1.7 1 1 0 1 1 1 1 KR domain Glyco_trans_1_4 PF13692.6 gi|15678404|ref|NP_275519.1| - 1.2e-15 58.1 0.0 2.1e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|15678404|ref|NP_275519.1| - 1.7e-15 56.9 0.0 4.5e-15 55.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678404|ref|NP_275519.1| - 2.9e-13 50.2 0.2 5.2e-13 49.3 0.2 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678404|ref|NP_275519.1| - 1.9e-10 41.4 0.3 3.3e-10 40.6 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|15678404|ref|NP_275519.1| - 0.00013 22.0 0.0 0.0054 16.8 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|15678404|ref|NP_275519.1| - 0.0034 17.7 0.0 0.0079 16.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Resolvase PF00239.21 gi|15678404|ref|NP_275519.1| - 0.034 14.2 0.0 0.082 13.0 0.0 1.6 1 0 0 1 1 1 0 Resolvase, N terminal domain Glyco_transf_28 PF03033.20 gi|15678404|ref|NP_275519.1| - 0.037 14.1 0.0 0.19 11.7 0.0 2.2 2 1 0 2 2 2 0 Glycosyltransferase family 28 N-terminal domain Glycos_transf_2 PF00535.26 gi|15678405|ref|NP_275520.1| - 9.3e-25 87.4 0.0 1.3e-24 86.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678405|ref|NP_275520.1| - 7.7e-09 35.8 0.0 8.8e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|15678405|ref|NP_275520.1| - 0.059 13.9 0.0 0.12 12.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF3479 PF11965.8 gi|15678405|ref|NP_275520.1| - 0.08 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) NTP_transf_3 PF12804.7 gi|15678405|ref|NP_275520.1| - 0.11 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain LPG_synthase_TM PF03706.13 gi|15678406|ref|NP_275521.1| - 4.9e-53 180.6 35.5 5.7e-53 180.4 35.5 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region PLAC9 PF15205.6 gi|15678406|ref|NP_275521.1| - 0.22 12.0 0.0 0.49 10.8 0.0 1.5 1 0 0 1 1 1 0 Placenta-specific protein 9 Polysacc_synt PF01943.17 gi|15678407|ref|NP_275522.1| - 3.9e-66 223.2 33.1 3.9e-66 223.2 33.1 2.9 1 1 1 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|15678407|ref|NP_275522.1| - 1.7e-21 76.7 20.6 1.7e-21 76.7 20.6 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|15678407|ref|NP_275522.1| - 1.5e-15 57.5 16.9 1.5e-15 57.5 16.9 4.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|15678407|ref|NP_275522.1| - 9.4e-08 31.9 13.5 9.4e-08 31.9 13.5 3.7 3 1 1 4 4 4 2 MatE Epimerase PF01370.21 gi|15678408|ref|NP_275523.1| - 8.9e-62 208.7 0.0 1.1e-61 208.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15678408|ref|NP_275523.1| - 2.6e-53 181.6 0.0 2.3e-52 178.5 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|15678408|ref|NP_275523.1| - 2.9e-23 82.3 0.0 4e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|15678408|ref|NP_275523.1| - 9e-13 48.0 0.0 3e-12 46.3 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|15678408|ref|NP_275523.1| - 1.1e-11 44.4 0.0 1.3e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|15678408|ref|NP_275523.1| - 2.1e-09 36.9 0.1 3.6e-05 23.1 0.0 2.4 2 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|15678408|ref|NP_275523.1| - 3.3e-09 36.9 0.0 4.5e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding TrkA_N PF02254.18 gi|15678408|ref|NP_275523.1| - 0.069 13.4 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain KR PF08659.10 gi|15678408|ref|NP_275523.1| - 0.099 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 KR domain DUF1616 PF07760.11 gi|15678409|ref|NP_275524.1| - 3.5e-47 161.2 3.3 3.5e-47 161.2 3.3 3.4 3 1 0 4 4 4 1 Protein of unknown function (DUF1616) Glyco_hydro_61 PF03443.14 gi|15678410|ref|NP_275525.1| - 0.071 13.0 0.0 0.16 11.9 0.0 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase family 61 NiFe_hyd_3_EhaA PF17367.2 gi|15678412|ref|NP_275527.1| - 1.1e-35 121.7 4.6 1.3e-35 121.4 4.6 1.0 1 0 0 1 1 1 1 NiFe-hydrogenase-type-3 Eha complex subunit A FeoB_C PF07664.12 gi|15678412|ref|NP_275527.1| - 0.012 15.2 0.1 2.9 7.6 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus DUF5518 PF17647.1 gi|15678412|ref|NP_275527.1| - 0.013 15.6 6.0 0.018 15.2 6.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5518) PMT_4TMC PF16192.5 gi|15678412|ref|NP_275527.1| - 0.2 11.2 1.0 0.23 11.0 1.0 1.4 1 1 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF2109 PF09882.9 gi|15678414|ref|NP_275529.1| - 4.3e-32 109.9 5.0 5e-32 109.7 5.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2109) PhrC_PhrF PF11131.8 gi|15678414|ref|NP_275529.1| - 0.068 12.8 0.7 0.12 12.0 0.7 1.5 1 0 0 1 1 1 0 Rap-phr extracellular signalling DUF2254 PF10011.9 gi|15678414|ref|NP_275529.1| - 0.12 11.2 3.5 0.15 10.9 3.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF2108 PF09881.9 gi|15678415|ref|NP_275530.1| - 2.1e-27 94.8 8.0 2.4e-27 94.7 8.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2108) DUF4040 PF13244.6 gi|15678415|ref|NP_275530.1| - 0.023 14.8 6.3 0.032 14.4 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4040) DUF2107 PF09880.9 gi|15678416|ref|NP_275531.1| - 1.7e-34 117.8 6.9 2e-34 117.5 6.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2107) YrhK PF14145.6 gi|15678416|ref|NP_275531.1| - 0.086 12.7 1.1 8.1 6.4 0.1 2.2 2 0 0 2 2 2 0 YrhK-like protein DUF2106 PF09879.9 gi|15678417|ref|NP_275532.1| - 4e-72 240.7 0.1 4.6e-72 240.5 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2106) DUF2105 PF09878.9 gi|15678418|ref|NP_275533.1| - 4.7e-86 287.6 14.4 5.5e-86 287.4 14.4 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) Oxidored_q2 PF00420.24 gi|15678418|ref|NP_275533.1| - 4.4 7.0 9.4 12 5.6 9.2 1.8 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NADHdeh_related PF10125.9 gi|15678419|ref|NP_275534.1| - 1.9e-101 338.0 16.4 2.2e-101 337.8 16.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase I, subunit N related protein Proton_antipo_M PF00361.20 gi|15678419|ref|NP_275534.1| - 2.8e-07 30.0 9.9 2.8e-07 30.0 9.9 1.6 2 0 0 2 2 2 1 Proton-conducting membrane transporter PRA1 PF03208.19 gi|15678419|ref|NP_275534.1| - 9.3 5.9 12.6 0.068 12.8 2.3 2.3 2 1 0 2 2 2 0 PRA1 family protein DUF4175 PF13779.6 gi|15678420|ref|NP_275535.1| - 0.0054 14.7 0.1 0.0059 14.6 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) TMEM208_SND2 PF05620.11 gi|15678420|ref|NP_275535.1| - 0.0087 15.9 0.0 0.0096 15.7 0.0 1.0 1 0 0 1 1 1 1 SRP-independent targeting protein 2/TMEM208 DUF2207 PF09972.9 gi|15678420|ref|NP_275535.1| - 0.039 12.7 0.1 0.039 12.7 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tetraspanin PF00335.20 gi|15678420|ref|NP_275535.1| - 0.15 11.7 0.0 0.17 11.6 0.0 1.0 1 0 0 1 1 1 0 Tetraspanin family NADHdh PF00146.21 gi|15678421|ref|NP_275536.1| - 1.5e-29 103.3 19.9 1.9e-29 102.9 19.9 1.1 1 0 0 1 1 1 1 NADH dehydrogenase Caps_synth_CapC PF14102.6 gi|15678422|ref|NP_275537.1| - 0.023 15.1 9.3 0.036 14.5 9.3 1.3 1 1 0 1 1 1 0 Capsule biosynthesis CapC Sdh_cyt PF01127.22 gi|15678422|ref|NP_275537.1| - 0.042 13.9 3.3 0.054 13.5 3.2 1.3 1 1 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PRA1 PF03208.19 gi|15678422|ref|NP_275537.1| - 0.38 10.4 5.8 0.48 10.0 5.8 1.1 1 0 0 1 1 1 0 PRA1 family protein DUF2104 PF09877.9 gi|15678423|ref|NP_275538.1| - 2.1e-37 127.4 2.1 2.4e-37 127.2 2.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2104) LapA_dom PF06305.11 gi|15678423|ref|NP_275538.1| - 0.7 9.7 0.0 0.7 9.7 0.0 2.9 4 0 0 4 4 4 0 Lipopolysaccharide assembly protein A domain DUF1959 PF09218.10 gi|15678424|ref|NP_275539.1| - 1e-50 170.7 1.4 1.1e-50 170.5 1.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1959) Oxidored_q6 PF01058.22 gi|15678425|ref|NP_275540.1| - 2.3e-27 95.4 0.0 2.7e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit UPF0004 PF00919.20 gi|15678425|ref|NP_275540.1| - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein family UPF0004 Complex1_49kDa PF00346.19 gi|15678426|ref|NP_275541.1| - 2.3e-47 161.4 1.6 9.8e-40 136.3 0.6 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|15678426|ref|NP_275541.1| - 1.3e-14 54.0 5.3 4.9e-12 45.5 0.0 3.5 2 2 1 3 3 3 2 Nickel-dependent hydrogenase Fer4 PF00037.27 gi|15678427|ref|NP_275542.1| - 3.4e-37 124.8 59.9 4.2e-08 32.7 1.8 6.3 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678427|ref|NP_275542.1| - 3.4e-32 109.2 55.8 6e-07 29.3 2.0 6.3 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678427|ref|NP_275542.1| - 9.5e-27 92.9 50.7 4e-11 42.9 10.8 4.8 3 2 2 5 5 5 5 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678427|ref|NP_275542.1| - 3.5e-26 91.5 48.2 8.4e-09 35.9 10.5 3.8 3 2 0 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678427|ref|NP_275542.1| - 1.4e-25 87.8 54.4 5.8e-05 22.9 3.9 6.4 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15678427|ref|NP_275542.1| - 3.2e-24 84.8 46.4 3.4e-08 33.5 11.5 3.7 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678427|ref|NP_275542.1| - 3.8e-23 81.4 46.4 1.8e-09 37.6 10.4 4.0 3 2 1 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678427|ref|NP_275542.1| - 7.9e-20 71.6 43.8 6e-05 23.9 1.8 6.3 5 1 2 7 7 7 5 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15678427|ref|NP_275542.1| - 9e-16 57.0 57.1 0.00073 19.9 1.4 6.3 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678427|ref|NP_275542.1| - 4.2e-14 52.8 46.8 0.0043 17.6 0.1 5.8 3 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678427|ref|NP_275542.1| - 6.7e-14 52.1 51.1 0.00058 20.3 9.3 5.9 2 2 4 6 6 6 6 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678427|ref|NP_275542.1| - 1.5e-09 38.1 67.9 0.074 14.0 4.6 6.3 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15678427|ref|NP_275542.1| - 1.6e-08 35.3 33.1 0.007 17.2 0.1 6.2 5 1 1 6 6 6 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15678427|ref|NP_275542.1| - 6.5e-08 33.0 47.6 0.21 12.2 0.2 6.5 6 0 0 6 6 6 6 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15678427|ref|NP_275542.1| - 9.9e-06 26.2 41.5 0.14 13.0 0.6 6.6 5 2 0 5 5 5 3 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|15678427|ref|NP_275542.1| - 8.5e-05 22.7 46.1 0.12 12.5 10.7 5.5 2 2 2 5 5 5 5 4Fe-4S dicluster domain Mut7-C PF01927.16 gi|15678427|ref|NP_275542.1| - 0.019 15.1 1.1 0.019 15.1 1.1 3.2 3 0 0 3 3 3 0 Mut7-C RNAse domain Cdc13_OB4_dimer PF18233.1 gi|15678427|ref|NP_275542.1| - 0.078 13.1 0.4 0.17 12.1 0.4 1.5 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain PEP-utilisers_N PF05524.13 gi|15678427|ref|NP_275542.1| - 0.079 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal Fer4_11 PF13247.6 gi|15678428|ref|NP_275543.1| - 5.2e-18 65.0 1.0 5.9e-18 64.8 1.0 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678428|ref|NP_275543.1| - 0.0026 17.7 4.2 0.0051 16.8 3.0 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678428|ref|NP_275543.1| - 0.0055 17.6 0.7 0.0076 17.2 0.7 1.4 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15678428|ref|NP_275543.1| - 0.0075 16.4 1.9 0.01 15.9 1.9 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15678428|ref|NP_275543.1| - 0.031 14.0 0.6 0.056 13.2 0.6 1.3 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_7 PF12838.7 gi|15678428|ref|NP_275543.1| - 0.033 14.8 3.2 0.06 13.9 2.1 1.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678428|ref|NP_275543.1| - 0.17 11.8 4.8 1 9.3 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678428|ref|NP_275543.1| - 0.34 11.1 5.6 0.35 11.0 4.0 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|15678429|ref|NP_275544.1| - 5.6e-46 152.6 73.5 1.8e-08 33.9 4.6 7.2 7 0 0 7 7 7 7 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678429|ref|NP_275544.1| - 1.2e-34 118.7 49.5 2.2e-09 37.8 7.0 5.2 4 1 1 5 5 5 5 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678429|ref|NP_275544.1| - 7e-34 115.7 50.9 2.7e-06 27.4 0.2 6.9 5 2 2 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678429|ref|NP_275544.1| - 3.5e-29 99.6 73.9 2.9e-06 27.1 3.4 7.2 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678429|ref|NP_275544.1| - 2e-28 99.1 44.8 0.00012 23.0 0.3 7.2 6 1 1 7 7 7 7 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15678429|ref|NP_275544.1| - 1.2e-24 86.2 62.6 8.5e-10 38.6 10.2 5.7 3 3 4 7 7 7 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678429|ref|NP_275544.1| - 6.7e-24 83.8 56.5 1.8e-07 31.2 10.3 5.1 3 3 2 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678429|ref|NP_275544.1| - 1.4e-23 81.4 69.2 6.1e-05 22.9 2.3 7.2 7 0 0 7 7 7 7 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678429|ref|NP_275544.1| - 2.3e-18 66.4 52.7 0.0042 17.5 0.5 6.6 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678429|ref|NP_275544.1| - 6.6e-18 63.7 68.8 0.00075 19.8 3.1 7.2 7 0 0 7 7 7 7 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678429|ref|NP_275544.1| - 4.2e-12 46.4 59.6 0.011 16.2 0.7 7.1 4 3 3 7 7 7 7 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678429|ref|NP_275544.1| - 5.6e-09 36.3 84.3 0.03 15.2 4.7 7.2 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15678429|ref|NP_275544.1| - 3.7e-08 34.1 44.9 0.13 13.1 0.2 7.2 7 0 0 7 7 7 6 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15678429|ref|NP_275544.1| - 1.1e-06 29.3 58.8 0.024 15.4 1.4 8.1 7 1 0 7 7 7 5 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15678429|ref|NP_275544.1| - 8.8e-06 26.2 66.6 0.19 12.3 1.7 7.5 7 0 0 7 7 7 5 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|15678429|ref|NP_275544.1| - 1.5e-05 25.2 53.0 0.22 11.7 0.2 6.2 4 2 2 6 6 6 4 4Fe-4S dicluster domain HAD PF12710.7 gi|15678430|ref|NP_275545.1| - 0.00017 22.1 0.0 0.077 13.4 0.0 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|15678430|ref|NP_275545.1| - 0.0034 17.5 0.0 0.018 15.1 0.0 2.0 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15678430|ref|NP_275545.1| - 0.066 13.5 0.0 0.29 11.4 0.0 2.0 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15678430|ref|NP_275545.1| - 0.12 12.1 0.0 0.35 10.6 0.0 1.8 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase FTR_C PF02741.15 gi|15678431|ref|NP_275546.1| - 3.5e-57 192.6 0.0 1.1e-56 191.0 0.0 1.7 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.18 gi|15678431|ref|NP_275546.1| - 3.5e-44 150.2 0.0 4.8e-44 149.7 0.0 1.2 1 0 0 1 1 1 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase URO-D PF01208.17 gi|15678431|ref|NP_275546.1| - 0.074 12.2 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) PfkB PF00294.24 gi|15678432|ref|NP_275547.1| - 4.2e-47 160.9 0.2 5.5e-47 160.5 0.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Fer4 PF00037.27 gi|15678433|ref|NP_275548.1| - 1.5e-35 119.6 71.3 2.2e-08 33.6 6.5 6.6 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678433|ref|NP_275548.1| - 1.7e-24 86.1 53.8 7.2e-12 45.7 7.2 5.2 4 2 2 6 6 5 5 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678433|ref|NP_275548.1| - 4.2e-23 81.3 85.1 1.6e-08 34.6 11.8 4.1 3 1 3 6 6 6 5 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678433|ref|NP_275548.1| - 2e-22 79.1 90.2 4.5e-07 29.9 12.8 4.4 3 2 3 6 6 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678433|ref|NP_275548.1| - 2.2e-22 79.8 44.9 0.00029 21.7 1.6 6.4 5 1 1 6 6 6 6 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|15678433|ref|NP_275548.1| - 3.9e-22 77.3 72.1 6.6e-07 29.1 6.1 6.7 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678433|ref|NP_275548.1| - 4.8e-20 70.4 66.0 3.1e-06 27.0 3.2 6.8 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678433|ref|NP_275548.1| - 1.6e-18 66.5 89.3 2.8e-07 30.6 14.0 5.9 3 2 4 7 7 6 6 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678433|ref|NP_275548.1| - 7e-15 55.2 49.6 1.1e-05 25.8 10.8 5.5 3 2 2 5 5 5 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678433|ref|NP_275548.1| - 6.2e-11 42.7 52.4 5.7e-05 23.6 9.7 5.7 2 2 3 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678433|ref|NP_275548.1| - 2.8e-07 30.5 70.4 0.00053 20.3 4.3 7.1 7 0 0 7 7 7 3 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678433|ref|NP_275548.1| - 9.5e-06 26.1 61.4 0.043 14.4 4.3 6.8 6 0 0 6 6 6 4 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15678433|ref|NP_275548.1| - 0.00021 22.0 81.1 0.00062 20.5 6.2 6.8 7 0 0 7 7 6 3 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15678433|ref|NP_275548.1| - 0.00025 21.7 10.4 0.007 17.1 1.8 7.3 5 4 1 6 6 6 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|15678433|ref|NP_275548.1| - 0.028 14.6 54.2 0.58 10.4 11.2 5.7 1 1 4 5 5 5 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15678433|ref|NP_275548.1| - 0.075 13.9 1.9 0.075 13.9 1.9 6.3 3 2 4 8 8 8 0 4Fe-4S dicluster domain CBS PF00571.28 gi|15678434|ref|NP_275549.1| - 2.9e-16 59.7 4.9 1.5e-08 35.0 0.4 2.6 2 0 0 2 2 2 2 CBS domain PRC PF05239.16 gi|15678434|ref|NP_275549.1| - 0.0016 18.5 0.5 2.2 8.4 0.0 2.5 2 0 0 2 2 2 2 PRC-barrel domain sCache_3_2 PF17203.4 gi|15678434|ref|NP_275549.1| - 0.0085 16.2 0.1 2.4 8.3 0.0 2.3 2 0 0 2 2 2 2 Single cache domain 3 Ribosomal_L9_C PF03948.14 gi|15678434|ref|NP_275549.1| - 0.098 13.1 0.0 7.5 7.1 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain Polbeta PF18765.1 gi|15678436|ref|NP_275551.1| - 1.1e-19 70.3 0.7 1.4e-19 69.9 0.7 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15678436|ref|NP_275551.1| - 6.9e-11 42.3 0.3 9.8e-11 41.8 0.3 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF86 PF01934.17 gi|15678437|ref|NP_275552.1| - 3.5e-09 36.6 0.0 4e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 E1-E2_ATPase PF00122.20 gi|15678439|ref|NP_275554.1| - 1.6e-49 167.9 0.4 4.5e-49 166.4 0.4 1.8 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|15678439|ref|NP_275554.1| - 2.5e-35 122.7 0.0 4.4e-35 121.9 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15678439|ref|NP_275554.1| - 0.041 13.6 0.3 0.071 12.8 0.3 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase PMBR PF09373.10 gi|15678440|ref|NP_275555.1| - 3.5e-50 165.9 13.9 8.5e-09 35.2 0.1 6.7 6 0 0 6 6 6 6 Pseudomurein-binding repeat Transglut_core PF01841.19 gi|15678440|ref|NP_275555.1| - 3.8e-23 82.1 2.3 7.4e-23 81.1 2.3 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily Peptidase_C71 PF12386.8 gi|15678440|ref|NP_275555.1| - 1e-09 38.2 4.6 1.5e-09 37.6 1.4 2.6 3 0 0 3 3 3 1 Pseudomurein endo-isopeptidase Pei Ribosomal_L39 PF00832.20 gi|15678440|ref|NP_275555.1| - 3.7e-06 26.4 1.2 2 8.1 0.0 4.3 4 0 0 4 4 4 2 Ribosomal L39 protein Nanovirus_coat PF04660.12 gi|15678440|ref|NP_275555.1| - 0.00043 20.4 0.5 0.005 16.9 0.0 2.6 3 0 0 3 3 3 1 Nanovirus coat protein E1_4HB PF16191.5 gi|15678440|ref|NP_275555.1| - 0.0029 17.8 0.0 4.4 7.6 0.0 3.3 4 0 0 4 4 4 2 Ubiquitin-activating enzyme E1 four-helix bundle DUF553 PF04473.12 gi|15678440|ref|NP_275555.1| - 0.0068 16.0 1.4 0.015 14.8 0.3 2.2 2 1 0 2 2 2 1 Transglutaminase-like domain Transglut_core3 PF13471.6 gi|15678440|ref|NP_275555.1| - 0.043 13.7 0.2 0.13 12.1 0.2 1.8 1 0 0 1 1 1 0 Transglutaminase-like superfamily DUF4507 PF14964.6 gi|15678440|ref|NP_275555.1| - 0.085 11.8 0.1 8.8 5.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4507) Hen1_Lam_C PF18441.1 gi|15678440|ref|NP_275555.1| - 0.65 9.8 2.8 16 5.4 0.2 2.5 2 0 0 2 2 2 0 Hen1 La-motif C-terminal domain Putative_PNPOx PF01243.20 gi|15678441|ref|NP_275556.1| - 2e-16 59.9 0.0 2.6e-16 59.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|15678441|ref|NP_275556.1| - 0.006 16.4 0.0 0.0064 16.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Asn_synthase PF00733.21 gi|15678442|ref|NP_275557.1| - 3.1e-55 188.3 3.4 8.8e-34 117.7 1.0 2.1 1 1 1 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|15678442|ref|NP_275557.1| - 5.5e-14 52.1 0.0 3e-13 49.7 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|15678442|ref|NP_275557.1| - 1.3e-11 44.8 0.2 7e-11 42.5 0.1 2.3 2 1 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 gi|15678442|ref|NP_275557.1| - 0.0011 18.1 0.0 0.0026 16.9 0.0 1.6 2 0 0 2 2 2 1 NAD synthase UBA_4 PF14555.6 gi|15678442|ref|NP_275557.1| - 0.11 12.4 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 UBA-like domain Glu-tRNAGln PF02686.15 gi|15678443|ref|NP_275558.1| - 3.4e-06 27.3 1.2 4.9e-06 26.7 1.2 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit DUF4264 PF14084.6 gi|15678443|ref|NP_275558.1| - 0.04 13.6 0.0 0.06 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) Kinesin_assoc PF16183.5 gi|15678443|ref|NP_275558.1| - 0.088 13.0 1.0 0.14 12.3 1.0 1.3 1 1 0 1 1 1 0 Kinesin-associated ACT PF01842.25 gi|15678444|ref|NP_275559.1| - 2.3e-08 33.6 2.6 1.4e-05 24.7 0.1 3.0 1 1 2 3 3 3 2 ACT domain Gly_kinase PF02595.15 gi|15678444|ref|NP_275559.1| - 0.066 12.2 0.0 0.081 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycerate kinase family Homoserine_dh PF00742.19 gi|15678445|ref|NP_275560.1| - 6.3e-50 169.5 0.2 8.8e-50 169.0 0.2 1.2 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|15678445|ref|NP_275560.1| - 1.4e-10 41.8 0.0 3e-10 40.8 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|15678445|ref|NP_275560.1| - 0.00081 19.2 0.0 0.0019 18.0 0.0 1.6 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PhosphMutase PF10143.9 gi|15678446|ref|NP_275561.1| - 1.1e-57 194.6 0.0 1.5e-57 194.2 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|15678446|ref|NP_275561.1| - 5.4e-50 170.1 0.0 6.2e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|15678446|ref|NP_275561.1| - 0.00021 21.0 0.0 0.00031 20.4 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase M20_dimer PF07687.14 gi|15678446|ref|NP_275561.1| - 0.1 12.5 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Peptidase dimerisation domain CTP_synth_N PF06418.14 gi|15678447|ref|NP_275562.1| - 6.1e-126 419.1 0.1 7.7e-126 418.8 0.1 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|15678447|ref|NP_275562.1| - 3.4e-58 196.6 0.0 5.4e-58 195.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15678447|ref|NP_275562.1| - 1.6e-11 44.4 0.1 2.3e-10 40.6 0.0 2.6 1 1 1 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|15678447|ref|NP_275562.1| - 0.00027 20.6 0.0 0.00051 19.7 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|15678447|ref|NP_275562.1| - 0.0058 16.7 0.0 0.01 15.9 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SNO PF01174.19 gi|15678447|ref|NP_275562.1| - 0.006 16.5 0.0 4.5 7.1 0.0 2.4 2 0 0 2 2 2 2 SNO glutamine amidotransferase family DJ-1_PfpI PF01965.24 gi|15678447|ref|NP_275562.1| - 0.037 13.8 0.1 0.11 12.3 0.0 1.8 2 0 0 2 2 2 0 DJ-1/PfpI family STT3 PF02516.14 gi|15678448|ref|NP_275563.1| - 7.9e-54 183.4 19.0 1.2e-45 156.3 11.0 3.1 2 1 1 3 3 3 3 Oligosaccharyl transferase STT3 subunit Arc_PepC PF06819.11 gi|15678449|ref|NP_275564.1| - 3.2e-41 139.9 0.1 6.2e-41 139.0 0.1 1.5 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminal Domain Peptidase_A24 PF01478.18 gi|15678449|ref|NP_275564.1| - 1.5e-13 51.1 5.8 1.5e-13 51.1 5.8 3.3 2 1 1 3 3 3 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 gi|15678449|ref|NP_275564.1| - 8.7e-06 26.2 0.0 6.6e-05 23.4 0.0 2.4 2 0 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II Class_IIIsignal PF04021.12 gi|15678450|ref|NP_275565.1| - 1.1e-07 31.5 2.2 2.4e-07 30.5 2.2 1.6 1 0 0 1 1 1 1 Class III signal peptide Tad PF13400.6 gi|15678450|ref|NP_275565.1| - 0.48 10.8 9.0 21 5.5 9.0 2.4 1 1 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like DUF2101 PF09874.9 gi|15678451|ref|NP_275566.1| - 1.6e-80 269.7 13.0 2e-80 269.4 13.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2101) DUF2244 PF10003.9 gi|15678451|ref|NP_275566.1| - 0.0011 18.6 13.6 0.0055 16.4 2.1 2.4 2 0 0 2 2 2 2 Integral membrane protein (DUF2244) TRAP-gamma PF07074.12 gi|15678451|ref|NP_275566.1| - 0.06 12.9 0.0 0.06 12.9 0.0 1.8 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Class_IIIsignal PF04021.12 gi|15678452|ref|NP_275567.1| - 0.00012 22.0 4.4 0.00022 21.1 4.4 1.5 1 0 0 1 1 1 1 Class III signal peptide SPC12 PF06645.13 gi|15678452|ref|NP_275567.1| - 0.028 14.5 0.1 0.045 13.8 0.1 1.4 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) ArabFuran-catal PF09206.11 gi|15678455|ref|NP_275570.1| - 0.021 14.1 0.1 0.4 9.9 0.0 2.3 2 0 0 2 2 2 0 Alpha-L-arabinofuranosidase B, catalytic LPD38 PF18857.1 gi|15678456|ref|NP_275571.1| - 0.1 12.7 0.2 0.38 10.9 0.2 1.8 2 0 0 2 2 2 0 Large polyvalent protein associated domain 38 DUF1958 PF09211.10 gi|15678457|ref|NP_275572.1| - 0.14 12.5 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1958) PepSY PF03413.19 gi|15678458|ref|NP_275573.1| - 0.051 14.1 0.0 0.08 13.5 0.0 1.3 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain MARVEL PF01284.23 gi|15678459|ref|NP_275574.1| - 0.17 11.9 3.7 5 7.2 0.0 2.6 2 1 0 2 2 2 0 Membrane-associating domain Diphthami_syn_2 PF01902.17 gi|15678460|ref|NP_275575.1| - 2e-110 367.5 0.0 2.2e-110 367.3 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase NIR_SIR_ferr PF03460.17 gi|15678460|ref|NP_275575.1| - 0.032 14.1 0.1 0.27 11.1 0.0 2.4 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain QueC PF06508.13 gi|15678460|ref|NP_275575.1| - 0.13 11.8 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC RNA_binding PF01877.17 gi|15678461|ref|NP_275576.1| - 1.1e-12 48.3 1.7 1.4e-11 44.7 1.7 2.0 1 1 0 1 1 1 1 RNA binding AAA_17 PF13207.6 gi|15678462|ref|NP_275577.1| - 4.9e-15 56.2 0.9 8.6e-15 55.4 0.3 1.6 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|15678462|ref|NP_275577.1| - 7.3e-11 42.7 0.2 1.3e-10 41.9 0.1 1.4 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|15678462|ref|NP_275577.1| - 0.00015 21.9 0.0 0.00019 21.5 0.0 1.3 1 0 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 gi|15678462|ref|NP_275577.1| - 0.0013 18.9 0.2 0.0023 18.1 0.1 1.5 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|15678462|ref|NP_275577.1| - 0.0051 16.7 4.0 0.17 11.8 0.6 2.1 1 1 1 2 2 2 2 NTPase Zeta_toxin PF06414.12 gi|15678462|ref|NP_275577.1| - 0.0076 15.5 0.1 2.7 7.2 0.0 2.2 2 0 0 2 2 2 2 Zeta toxin CoaE PF01121.20 gi|15678462|ref|NP_275577.1| - 0.0085 15.8 0.1 0.033 13.9 0.0 1.9 2 0 0 2 2 2 1 Dephospho-CoA kinase P-mevalo_kinase PF04275.14 gi|15678462|ref|NP_275577.1| - 0.035 14.1 0.0 0.11 12.4 0.0 1.9 1 1 1 2 2 2 0 Phosphomevalonate kinase MeaB PF03308.16 gi|15678462|ref|NP_275577.1| - 0.036 13.1 0.4 0.071 12.1 0.2 1.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PGM_PMM_II PF02879.16 gi|15678462|ref|NP_275577.1| - 0.038 14.6 0.0 0.18 12.4 0.0 1.9 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATP_bind_2 PF03668.15 gi|15678462|ref|NP_275577.1| - 0.067 12.5 0.3 0.11 11.7 0.3 1.3 1 0 0 1 1 1 0 P-loop ATPase protein family PPS_PS PF02006.16 gi|15678463|ref|NP_275578.1| - 1e-73 246.6 1.9 1.2e-73 246.4 1.9 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase MCM_N PF14551.6 gi|15678463|ref|NP_275578.1| - 0.029 14.9 0.0 0.07 13.7 0.0 1.7 1 1 0 1 1 1 0 MCM N-terminal domain DUF4199 PF13858.6 gi|15678464|ref|NP_275579.1| - 0.42 11.0 4.6 0.45 10.9 4.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Peptidase_M42 PF05343.14 gi|15678465|ref|NP_275580.1| - 1.9e-111 371.7 1.5 2.4e-111 371.4 1.5 1.1 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 gi|15678465|ref|NP_275580.1| - 0.13 11.9 0.0 4.3 7.0 0.0 2.5 2 1 0 2 2 2 0 Peptidase family M28 DUF4883 PF16224.5 gi|15678466|ref|NP_275581.1| - 0.03 14.6 0.4 1.2 9.4 0.0 2.0 1 1 1 2 2 2 0 DOmain of unknown function (DUF4883) ATPase PF06745.13 gi|15678467|ref|NP_275582.1| - 6.6e-67 225.2 1.7 7.6e-67 225.0 1.7 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15678467|ref|NP_275582.1| - 3.4e-08 33.3 0.0 1.5e-07 31.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain RecA PF00154.21 gi|15678467|ref|NP_275582.1| - 4.5e-06 26.3 0.1 7.2e-06 25.6 0.1 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|15678467|ref|NP_275582.1| - 1.1e-05 24.9 0.0 1.6e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|15678467|ref|NP_275582.1| - 1.2e-05 25.1 0.1 0.0018 18.1 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_24 PF13479.6 gi|15678467|ref|NP_275582.1| - 5.4e-05 23.0 0.1 0.00011 22.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|15678467|ref|NP_275582.1| - 0.00014 21.8 0.1 0.00019 21.4 0.1 1.2 1 0 0 1 1 1 1 NTPase GvpD PF07088.11 gi|15678467|ref|NP_275582.1| - 0.00048 18.9 1.0 0.0018 17.0 1.0 1.7 1 1 0 1 1 1 1 GvpD gas vesicle protein DUF2075 PF09848.9 gi|15678467|ref|NP_275582.1| - 0.00069 19.0 0.0 0.00095 18.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|15678467|ref|NP_275582.1| - 0.0025 18.2 0.1 0.0036 17.7 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15678467|ref|NP_275582.1| - 0.0031 17.8 0.2 0.009 16.3 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15678467|ref|NP_275582.1| - 0.0069 16.8 0.3 0.016 15.6 0.3 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MEDS PF14417.6 gi|15678467|ref|NP_275582.1| - 0.019 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DEAD PF00270.29 gi|15678467|ref|NP_275582.1| - 0.022 14.6 0.5 0.065 13.0 0.5 1.7 1 1 0 1 1 1 0 DEAD/DEAH box helicase DLIC PF05783.11 gi|15678467|ref|NP_275582.1| - 0.064 12.1 0.0 0.088 11.6 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NACHT PF05729.12 gi|15678467|ref|NP_275582.1| - 0.27 11.1 0.8 0.64 9.9 0.8 1.8 1 1 0 1 1 1 0 NACHT domain MetOD1 PF18546.1 gi|15678468|ref|NP_275583.1| - 1.5e-53 181.0 0.0 2.4e-53 180.2 0.0 1.4 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|15678468|ref|NP_275583.1| - 4.8e-23 81.5 0.1 8.6e-23 80.7 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.25 gi|15678468|ref|NP_275583.1| - 6.9e-12 45.4 0.0 1.4e-11 44.4 0.0 1.6 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|15678468|ref|NP_275583.1| - 8.7e-12 44.8 0.0 2.7e-11 43.2 0.0 2.0 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|15678468|ref|NP_275583.1| - 1.4e-09 38.1 0.0 2.5e-09 37.3 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|15678468|ref|NP_275583.1| - 9.5e-09 35.5 0.0 1.9e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 gi|15678468|ref|NP_275583.1| - 0.045 13.9 0.0 0.13 12.5 0.0 1.9 1 1 0 1 1 1 0 PAS fold B12-binding PF02310.19 gi|15678468|ref|NP_275583.1| - 0.067 13.2 0.1 0.23 11.5 0.1 1.9 2 0 0 2 2 2 0 B12 binding domain UvrC_HhH_N PF08459.11 gi|15678469|ref|NP_275584.1| - 7.1e-44 149.4 0.0 1e-42 145.6 0.0 2.2 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|15678469|ref|NP_275584.1| - 3.1e-12 46.6 0.3 4e-11 43.0 0.2 2.3 2 0 0 2 2 2 1 GIY-YIG catalytic domain UVR PF02151.19 gi|15678469|ref|NP_275584.1| - 3.8e-12 45.5 6.7 9.3e-12 44.3 6.7 1.7 1 0 0 1 1 1 1 UvrB/uvrC motif HHH_5 PF14520.6 gi|15678469|ref|NP_275584.1| - 1.6e-11 44.6 0.0 6.3e-11 42.7 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|15678469|ref|NP_275584.1| - 1.9e-11 43.9 0.0 8.4e-11 41.8 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|15678469|ref|NP_275584.1| - 8.7e-10 38.0 0.0 5.5e-07 29.1 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif PKK PF12474.8 gi|15678469|ref|NP_275584.1| - 0.09 12.9 1.9 0.18 11.9 1.9 1.4 1 0 0 1 1 1 0 Polo kinase kinase 5_3_exonuc PF01367.20 gi|15678469|ref|NP_275584.1| - 0.12 13.0 0.0 0.65 10.6 0.0 2.2 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HHH_3 PF12836.7 gi|15678469|ref|NP_275584.1| - 0.16 12.3 0.0 0.49 10.7 0.0 1.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif APP_E2 PF12925.7 gi|15678469|ref|NP_275584.1| - 0.69 9.6 4.8 1.7 8.3 1.2 2.2 2 0 0 2 2 2 0 E2 domain of amyloid precursor protein UvrB_inter PF17757.1 gi|15678470|ref|NP_275585.1| - 5.2e-32 109.9 0.3 2.7e-31 107.6 0.0 2.4 3 0 0 3 3 3 1 UvrB interaction domain Helicase_C PF00271.31 gi|15678470|ref|NP_275585.1| - 5.6e-18 65.3 0.1 1.5e-17 63.9 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UvrB PF12344.8 gi|15678470|ref|NP_275585.1| - 4.9e-15 55.1 0.8 1e-14 54.0 0.8 1.6 1 0 0 1 1 1 1 Ultra-violet resistance protein B UVR PF02151.19 gi|15678470|ref|NP_275585.1| - 1.1e-10 40.9 5.1 1.1e-10 40.9 5.1 2.1 2 0 0 2 2 2 1 UvrB/uvrC motif ResIII PF04851.15 gi|15678470|ref|NP_275585.1| - 1.2e-10 41.7 0.0 5.4e-10 39.5 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|15678470|ref|NP_275585.1| - 0.0013 18.5 0.0 0.011 15.5 0.0 2.4 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|15678470|ref|NP_275585.1| - 0.0027 17.4 0.0 0.37 10.5 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|15678470|ref|NP_275585.1| - 0.012 15.9 0.0 7.8 6.8 0.0 3.0 2 1 0 2 2 2 0 AAA domain DUF2075 PF09848.9 gi|15678470|ref|NP_275585.1| - 0.075 12.3 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 gi|15678470|ref|NP_275585.1| - 0.1 13.1 0.0 1.1 9.6 0.0 2.7 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 gi|15678470|ref|NP_275585.1| - 0.11 12.6 0.6 0.44 10.6 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain DUF3969 PF13108.6 gi|15678470|ref|NP_275585.1| - 0.17 11.9 0.5 1.8 8.6 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3969) CdvA PF18822.1 gi|15678470|ref|NP_275585.1| - 0.68 9.8 6.2 0.44 10.4 1.6 2.6 2 0 0 2 2 2 0 CdvA-like coiled-coil domain UvrA_inter PF17760.1 gi|15678471|ref|NP_275586.1| - 2.5e-41 140.1 1.7 4.9e-41 139.2 0.5 2.1 3 0 0 3 3 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|15678471|ref|NP_275586.1| - 3.8e-40 136.6 0.1 2.2e-38 131.0 0.0 3.0 3 0 0 3 3 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|15678471|ref|NP_275586.1| - 6.4e-20 72.1 0.0 1.1e-08 35.7 0.0 4.3 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|15678471|ref|NP_275586.1| - 2e-11 43.7 0.0 0.059 12.8 0.0 4.1 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15678471|ref|NP_275586.1| - 1.2e-07 31.3 0.0 0.012 15.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|15678471|ref|NP_275586.1| - 9.6e-07 28.9 0.0 0.0059 16.5 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase BCA_ABC_TP_C PF12399.8 gi|15678471|ref|NP_275586.1| - 1.3e-06 28.2 2.6 0.0032 17.3 0.1 2.8 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter AAA_16 PF13191.6 gi|15678471|ref|NP_275586.1| - 2.6e-06 27.9 0.2 0.13 12.6 0.0 3.0 4 0 0 4 4 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|15678471|ref|NP_275586.1| - 4.9e-06 26.6 6.2 0.14 11.9 0.0 4.3 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15678471|ref|NP_275586.1| - 9.7e-06 26.2 0.2 0.039 14.5 0.0 3.0 3 0 0 3 3 2 2 AAA domain AAA_22 PF13401.6 gi|15678471|ref|NP_275586.1| - 1.4e-05 25.4 0.1 0.38 11.0 0.0 3.4 4 0 0 4 4 2 2 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|15678471|ref|NP_275586.1| - 8.1e-05 22.9 1.6 0.21 12.0 0.2 3.4 3 0 0 3 3 3 1 DnaJ central domain AAA_18 PF13238.6 gi|15678471|ref|NP_275586.1| - 0.00012 22.7 0.0 0.75 10.3 0.0 3.0 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|15678471|ref|NP_275586.1| - 0.00027 21.1 0.1 0.31 11.2 0.0 3.6 4 0 0 4 4 3 1 AAA domain AAA_25 PF13481.6 gi|15678471|ref|NP_275586.1| - 0.00047 19.8 0.0 1.3 8.6 0.0 3.5 4 0 0 4 4 4 1 AAA domain ATPase PF06745.13 gi|15678471|ref|NP_275586.1| - 0.00097 18.5 0.0 0.4 10.0 0.0 2.5 2 0 0 2 2 2 1 KaiC AAA_14 PF13173.6 gi|15678471|ref|NP_275586.1| - 0.0012 18.8 0.0 2.1 8.4 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|15678471|ref|NP_275586.1| - 0.0019 18.0 0.4 11 5.6 0.0 3.9 4 0 0 4 4 4 0 AAA ATPase domain Rad50_zn_hook PF04423.14 gi|15678471|ref|NP_275586.1| - 0.0024 17.7 0.2 3.1 7.7 0.0 3.8 3 0 0 3 3 3 1 Rad50 zinc hook motif cobW PF02492.19 gi|15678471|ref|NP_275586.1| - 0.003 17.2 0.1 0.33 10.5 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|15678471|ref|NP_275586.1| - 0.0043 16.4 0.0 2.7 7.2 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|15678471|ref|NP_275586.1| - 0.0057 16.4 0.3 4.3 7.0 0.0 3.1 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 gi|15678471|ref|NP_275586.1| - 0.0064 16.3 0.0 0.56 9.9 0.0 2.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase NACHT PF05729.12 gi|15678471|ref|NP_275586.1| - 0.0065 16.4 0.0 1 9.2 0.0 2.7 3 0 0 3 3 3 1 NACHT domain APS_kinase PF01583.20 gi|15678471|ref|NP_275586.1| - 0.0076 16.2 0.0 3.6 7.4 0.0 2.7 2 0 0 2 2 2 1 Adenylylsulphate kinase ATPase_2 PF01637.18 gi|15678471|ref|NP_275586.1| - 0.0098 15.8 0.0 2 8.3 0.0 2.6 3 0 0 3 3 2 1 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 gi|15678471|ref|NP_275586.1| - 0.03 14.4 0.1 2.4 8.3 0.0 2.9 3 0 0 3 3 3 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|15678471|ref|NP_275586.1| - 0.057 12.9 0.0 1.8 8.1 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region RNA12 PF10443.9 gi|15678471|ref|NP_275586.1| - 0.065 11.9 0.0 1.4 7.6 0.0 2.1 2 0 0 2 2 2 0 RNA12 protein T2SSE PF00437.20 gi|15678471|ref|NP_275586.1| - 0.07 12.2 0.1 12 4.8 0.0 2.6 2 0 0 2 2 2 0 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|15678471|ref|NP_275586.1| - 0.08 12.8 0.1 4.6 7.1 0.0 3.2 3 0 0 3 3 2 0 NTPase AAA_30 PF13604.6 gi|15678471|ref|NP_275586.1| - 0.13 12.0 0.0 8.3 6.1 0.0 2.9 3 0 0 3 3 2 0 AAA domain SbcCD_C PF13558.6 gi|15678471|ref|NP_275586.1| - 0.15 12.3 0.3 7.8 6.8 0.0 3.3 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 gi|15678471|ref|NP_275586.1| - 0.16 12.4 0.1 12 6.4 0.0 2.4 2 0 0 2 2 2 0 RNA helicase DUF3987 PF13148.6 gi|15678471|ref|NP_275586.1| - 0.17 10.9 0.0 0.49 9.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) NB-ARC PF00931.22 gi|15678471|ref|NP_275586.1| - 0.2 10.8 0.0 11 5.1 0.0 2.4 2 0 0 2 2 2 0 NB-ARC domain AAA_17 PF13207.6 gi|15678471|ref|NP_275586.1| - 0.8 10.1 4.3 1.2 9.6 0.0 3.3 3 0 0 3 3 3 0 AAA domain HATPase_c PF02518.26 gi|15678472|ref|NP_275587.1| - 2.3e-17 63.5 0.0 4.1e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|15678472|ref|NP_275587.1| - 3.3e-12 46.2 0.1 8.1e-12 45.0 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|15678472|ref|NP_275587.1| - 0.00054 19.8 0.0 0.0016 18.4 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 gi|15678472|ref|NP_275587.1| - 0.044 13.7 0.0 0.15 12.0 0.0 1.8 1 1 1 2 2 2 0 Histidine kinase-like ATPase domain DUF4372 PF14294.6 gi|15678472|ref|NP_275587.1| - 0.083 13.0 1.6 0.11 12.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4372) Response_reg PF00072.24 gi|15678473|ref|NP_275588.1| - 4.9e-23 81.4 0.0 5.7e-23 81.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.12 gi|15678474|ref|NP_275589.1| - 1.5e-27 95.5 2.4 1.5e-27 95.5 2.4 2.7 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|15678474|ref|NP_275589.1| - 2.1e-15 56.8 0.1 4.4e-06 26.9 0.0 3.0 2 1 1 3 3 3 2 PAS domain Response_reg PF00072.24 gi|15678474|ref|NP_275589.1| - 2.6e-14 53.3 0.0 6.3e-14 52.1 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.25 gi|15678474|ref|NP_275589.1| - 7.9e-13 48.4 0.0 1.7e-07 31.2 0.0 2.7 2 0 0 2 2 2 2 PAS fold HATPase_c PF02518.26 gi|15678474|ref|NP_275589.1| - 6.6e-12 45.9 0.1 5e-10 39.9 0.1 3.2 2 2 1 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|15678474|ref|NP_275589.1| - 1.6e-10 41.2 0.0 0.00037 20.7 0.0 3.2 2 2 0 2 2 2 2 PAS fold PAS_8 PF13188.7 gi|15678474|ref|NP_275589.1| - 1.8e-08 34.2 0.0 8.2e-05 22.5 0.0 2.8 2 0 0 2 2 2 2 PAS domain HWE_HK PF07536.14 gi|15678474|ref|NP_275589.1| - 1.9e-05 25.2 0.2 4.5e-05 24.1 0.2 1.6 1 0 0 1 1 1 1 HWE histidine kinase PAS_3 PF08447.12 gi|15678474|ref|NP_275589.1| - 2.5e-05 24.5 0.0 0.0029 17.9 0.0 2.8 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|15678474|ref|NP_275589.1| - 5.7e-05 23.1 0.0 0.00015 21.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|15678474|ref|NP_275589.1| - 0.13 12.0 0.6 0.33 10.7 0.6 1.7 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain MetOD1 PF18546.1 gi|15678475|ref|NP_275590.1| - 5.3e-44 149.9 0.0 7e-44 149.5 0.0 1.1 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|15678475|ref|NP_275590.1| - 3.4e-24 85.2 0.3 5.7e-24 84.4 0.3 1.4 1 0 0 1 1 1 1 Response regulator receiver domain ATC_hydrolase PF14196.6 gi|15678475|ref|NP_275590.1| - 0.00026 21.8 0.1 0.0019 19.0 0.1 2.1 1 1 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase DUF763 PF05559.11 gi|15678476|ref|NP_275591.1| - 1.6e-89 300.2 0.0 1.9e-89 300.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF763) DUF763 PF05559.11 gi|15678477|ref|NP_275592.1| - 2.3e-28 99.3 0.0 2.8e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) Glycos_transf_1 PF00534.20 gi|15678478|ref|NP_275593.1| - 1.9e-41 141.5 0.0 3.5e-41 140.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15678478|ref|NP_275593.1| - 1.8e-32 112.6 0.0 4.5e-32 111.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15678478|ref|NP_275593.1| - 1.8e-20 73.6 0.2 3.8e-20 72.6 0.2 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15678478|ref|NP_275593.1| - 4e-15 56.6 0.0 2.3e-14 54.1 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|15678478|ref|NP_275593.1| - 3.3e-09 36.9 0.2 9.9e-09 35.3 0.1 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|15678478|ref|NP_275593.1| - 9.9e-08 32.3 0.0 1.8e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 AAA_lid_2 PF17863.1 gi|15678479|ref|NP_275594.1| - 1.2e-19 70.0 3.6 2.9e-19 68.7 3.6 1.7 1 0 0 1 1 1 1 AAA lid domain VWA_2 PF13519.6 gi|15678479|ref|NP_275594.1| - 1.5e-13 51.4 0.0 4.1e-13 49.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.21 gi|15678479|ref|NP_275594.1| - 7.8e-09 35.2 0.1 0.00022 20.7 0.0 2.5 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|15678479|ref|NP_275594.1| - 3.1e-08 33.7 0.1 0.00018 21.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) VWA PF00092.28 gi|15678479|ref|NP_275594.1| - 0.00012 22.3 0.0 0.00021 21.6 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_16 PF13191.6 gi|15678479|ref|NP_275594.1| - 0.00018 22.0 0.0 0.00071 20.0 0.0 2.0 1 0 0 1 1 1 1 AAA ATPase domain MCM PF00493.23 gi|15678479|ref|NP_275594.1| - 0.0017 17.5 0.0 0.19 10.8 0.0 2.7 2 1 0 2 2 2 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|15678479|ref|NP_275594.1| - 0.0041 16.8 0.0 3.8 7.2 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 gi|15678479|ref|NP_275594.1| - 0.008 16.4 0.0 0.057 13.7 0.0 2.4 2 1 0 2 2 2 1 AAA domain TIP49_C PF17856.1 gi|15678479|ref|NP_275594.1| - 0.0082 16.3 0.6 0.026 14.7 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain VWA_3 PF13768.6 gi|15678479|ref|NP_275594.1| - 0.022 14.7 0.0 0.051 13.5 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain Mg_chelatase_C PF13335.6 gi|15678479|ref|NP_275594.1| - 0.046 14.4 1.6 0.16 12.6 1.6 1.9 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal AAA_29 PF13555.6 gi|15678479|ref|NP_275594.1| - 0.088 12.6 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF815 PF05673.13 gi|15678479|ref|NP_275594.1| - 0.098 11.8 0.0 0.41 9.8 0.0 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|15678479|ref|NP_275594.1| - 0.2 12.2 1.0 6.9 7.2 0.0 3.4 4 1 0 4 4 4 0 AAA domain Trep_Strep PF09605.10 gi|15678480|ref|NP_275595.1| - 1.8e-06 28.0 17.9 1.8e-06 28.0 17.9 2.1 1 1 1 2 2 2 2 Hypothetical bacterial integral membrane protein (Trep_Strep) CbiQ PF02361.16 gi|15678481|ref|NP_275596.1| - 1e-41 143.0 13.2 1e-41 143.0 13.2 1.3 1 1 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|15678482|ref|NP_275597.1| - 5.2e-55 185.7 0.0 2.7e-26 92.7 0.0 2.4 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|15678482|ref|NP_275597.1| - 1.7e-17 64.2 6.7 0.00028 20.8 0.2 4.1 2 2 2 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15678482|ref|NP_275597.1| - 4.8e-14 52.3 0.1 3e-05 23.6 0.0 3.4 2 2 1 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15678482|ref|NP_275597.1| - 3.1e-10 39.6 0.1 2.9e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|15678482|ref|NP_275597.1| - 2.7e-08 34.4 0.5 0.00039 20.8 0.3 2.4 2 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|15678482|ref|NP_275597.1| - 9.7e-08 32.7 0.0 0.017 15.6 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|15678482|ref|NP_275597.1| - 1.4e-07 31.4 0.3 0.0073 16.0 0.0 2.9 3 1 0 3 3 2 2 AAA domain AAA_18 PF13238.6 gi|15678482|ref|NP_275597.1| - 2.7e-07 31.2 0.5 0.019 15.5 0.0 3.0 2 1 1 3 3 3 2 AAA domain NB-ARC PF00931.22 gi|15678482|ref|NP_275597.1| - 4.5e-07 29.3 0.0 0.008 15.4 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_22 PF13401.6 gi|15678482|ref|NP_275597.1| - 8.5e-07 29.3 2.1 0.013 15.8 0.2 3.0 2 2 0 2 2 2 2 AAA domain NTPase_1 PF03266.15 gi|15678482|ref|NP_275597.1| - 9.1e-07 28.9 3.7 0.0084 16.0 0.1 3.0 2 2 0 2 2 2 2 NTPase Mg_chelatase PF01078.21 gi|15678482|ref|NP_275597.1| - 2.1e-06 27.3 0.2 0.016 14.6 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI PRK PF00485.18 gi|15678482|ref|NP_275597.1| - 3.1e-06 27.1 0.0 0.023 14.4 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 gi|15678482|ref|NP_275597.1| - 3.3e-06 27.4 0.0 0.082 13.3 0.0 2.5 2 0 0 2 2 2 2 RNA helicase NACHT PF05729.12 gi|15678482|ref|NP_275597.1| - 5.8e-06 26.3 0.4 0.25 11.3 0.0 3.0 3 0 0 3 3 3 2 NACHT domain AAA PF00004.29 gi|15678482|ref|NP_275597.1| - 1.1e-05 25.8 0.9 0.071 13.5 0.0 3.1 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) APS_kinase PF01583.20 gi|15678482|ref|NP_275597.1| - 1.7e-05 24.7 0.2 0.018 14.9 0.1 2.4 2 0 0 2 2 2 2 Adenylylsulphate kinase T2SSE PF00437.20 gi|15678482|ref|NP_275597.1| - 2e-05 23.8 0.0 0.14 11.2 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein SbcCD_C PF13558.6 gi|15678482|ref|NP_275597.1| - 2.1e-05 24.7 1.3 0.39 11.0 0.2 4.0 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_5 PF07728.14 gi|15678482|ref|NP_275597.1| - 2.6e-05 24.2 2.0 0.55 10.2 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 gi|15678482|ref|NP_275597.1| - 2.9e-05 23.9 1.1 0.42 10.3 0.0 3.7 4 0 0 4 4 4 1 IstB-like ATP binding protein AAA_13 PF13166.6 gi|15678482|ref|NP_275597.1| - 6.5e-05 21.8 0.1 0.13 10.9 0.0 3.0 3 0 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 gi|15678482|ref|NP_275597.1| - 6.8e-05 22.8 0.0 0.38 10.6 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_24 PF13479.6 gi|15678482|ref|NP_275597.1| - 8.2e-05 22.4 0.1 0.41 10.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|15678482|ref|NP_275597.1| - 0.00019 21.6 0.9 0.67 10.1 0.2 2.5 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|15678482|ref|NP_275597.1| - 0.00028 20.5 2.1 0.9 9.1 0.0 3.3 3 0 0 3 3 3 2 AAA domain MeaB PF03308.16 gi|15678482|ref|NP_275597.1| - 0.00055 19.0 0.3 0.4 9.6 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|15678482|ref|NP_275597.1| - 0.00074 18.9 0.2 0.12 11.7 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin ATPase_2 PF01637.18 gi|15678482|ref|NP_275597.1| - 0.00087 19.3 0.0 1.1 9.1 0.0 2.5 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea RuvB_N PF05496.12 gi|15678482|ref|NP_275597.1| - 0.001 18.9 0.3 2.8 7.6 0.0 3.4 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|15678482|ref|NP_275597.1| - 0.001 18.8 0.1 0.15 11.8 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain TsaE PF02367.17 gi|15678482|ref|NP_275597.1| - 0.0011 18.9 0.1 0.75 9.8 0.0 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activ_2 PF14532.6 gi|15678482|ref|NP_275597.1| - 0.0022 18.1 0.0 3.5 7.7 0.0 3.2 3 0 0 3 3 3 0 Sigma-54 interaction domain cobW PF02492.19 gi|15678482|ref|NP_275597.1| - 0.0049 16.5 0.9 0.5 9.9 0.1 2.5 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PIF1 PF05970.14 gi|15678482|ref|NP_275597.1| - 0.0056 15.9 0.0 0.21 10.7 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase PhoH PF02562.16 gi|15678482|ref|NP_275597.1| - 0.0063 16.0 0.1 1.8 8.0 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein MMR_HSR1 PF01926.23 gi|15678482|ref|NP_275597.1| - 0.0086 16.2 0.2 0.45 10.6 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATPase PF06745.13 gi|15678482|ref|NP_275597.1| - 0.0096 15.3 0.2 1.5 8.2 0.0 2.5 2 0 0 2 2 2 1 KaiC AAA_28 PF13521.6 gi|15678482|ref|NP_275597.1| - 0.011 16.0 2.0 3.2 8.0 0.1 2.5 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 gi|15678482|ref|NP_275597.1| - 0.013 15.4 0.2 5.3 6.9 0.0 3.0 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.6 gi|15678482|ref|NP_275597.1| - 0.015 15.3 0.3 1.4 8.9 0.0 2.9 3 0 0 3 3 2 0 AAA domain CPT PF07931.12 gi|15678482|ref|NP_275597.1| - 0.025 14.4 0.0 1 9.2 0.0 2.5 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_7 PF12775.7 gi|15678482|ref|NP_275597.1| - 0.042 13.4 0.3 1.6 8.2 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region Thymidylate_kin PF02223.17 gi|15678482|ref|NP_275597.1| - 0.053 13.2 0.2 5.8 6.5 0.0 3.1 3 0 0 3 3 3 0 Thymidylate kinase Cytidylate_kin PF02224.18 gi|15678482|ref|NP_275597.1| - 0.065 13.0 0.4 8 6.1 0.1 2.3 2 0 0 2 2 2 0 Cytidylate kinase ATP_bind_1 PF03029.17 gi|15678482|ref|NP_275597.1| - 0.077 12.8 1.0 6 6.6 0.2 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 gi|15678482|ref|NP_275597.1| - 0.12 12.1 0.1 13 5.5 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation CoaE PF01121.20 gi|15678482|ref|NP_275597.1| - 0.12 12.0 1.8 4.6 6.9 0.1 2.5 2 0 0 2 2 2 0 Dephospho-CoA kinase DUF87 PF01935.17 gi|15678482|ref|NP_275597.1| - 0.15 12.1 0.7 7.4 6.6 0.1 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_15 PF13175.6 gi|15678482|ref|NP_275597.1| - 0.16 11.6 0.0 4.7 6.8 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain AAA_19 PF13245.6 gi|15678482|ref|NP_275597.1| - 0.16 12.3 2.3 6.7 7.0 0.0 2.8 3 0 0 3 3 2 0 AAA domain TIP49 PF06068.13 gi|15678482|ref|NP_275597.1| - 0.18 11.0 0.2 8.2 5.5 0.1 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain ABC_ATPase PF09818.9 gi|15678482|ref|NP_275597.1| - 2.4 6.9 5.3 8.3 5.1 0.0 3.1 4 0 0 4 4 4 0 Predicted ATPase of the ABC class DUF3479 PF11965.8 gi|15678483|ref|NP_275598.1| - 0.0079 16.3 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3479) CobN-Mg_chel PF02514.16 gi|15678484|ref|NP_275599.1| - 2.2e-252 840.3 0.0 2.6e-252 840.1 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase PAS PF00989.25 gi|15678485|ref|NP_275600.1| - 4.5e-42 142.6 0.1 1.9e-18 66.5 0.1 3.4 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|15678485|ref|NP_275600.1| - 4.2e-36 123.4 0.0 6.1e-15 55.4 0.0 3.6 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.10 gi|15678485|ref|NP_275600.1| - 1.7e-32 111.9 0.0 8.3e-13 48.6 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 gi|15678485|ref|NP_275600.1| - 3.7e-24 84.2 0.0 1.2e-07 31.5 0.0 3.5 3 0 0 3 3 3 3 PAS domain Response_reg PF00072.24 gi|15678485|ref|NP_275600.1| - 2.7e-19 69.4 0.0 5e-19 68.5 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain PAS_3 PF08447.12 gi|15678485|ref|NP_275600.1| - 6.9e-14 51.9 0.2 1.4e-07 31.7 0.0 3.7 3 0 0 3 3 3 3 PAS fold PAS_7 PF12860.7 gi|15678485|ref|NP_275600.1| - 1.2e-07 31.9 0.0 0.0067 16.6 0.0 4.3 3 2 1 4 4 4 2 PAS fold PAS_10 PF13596.6 gi|15678485|ref|NP_275600.1| - 9.3e-06 26.2 0.0 0.00024 21.6 0.0 2.7 3 0 0 3 3 3 1 PAS domain PAS_11 PF14598.6 gi|15678485|ref|NP_275600.1| - 0.00083 19.5 0.0 0.009 16.1 0.0 2.4 2 0 0 2 2 2 1 PAS domain MLTR_LBD PF17765.1 gi|15678485|ref|NP_275600.1| - 0.0065 16.6 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain HTH_49 PF18010.1 gi|15678485|ref|NP_275600.1| - 0.16 11.9 0.4 29 4.7 0.0 2.7 2 0 0 2 2 2 0 Cry35Ab1 HTH C-terminal domain PAS_4 PF08448.10 gi|15678486|ref|NP_275601.1| - 6.7e-07 29.5 0.0 0.00065 19.9 0.0 2.1 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|15678486|ref|NP_275601.1| - 4.2e-06 26.7 0.1 0.0013 18.7 0.0 2.1 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|15678486|ref|NP_275601.1| - 0.00046 20.4 0.0 0.028 14.7 0.0 2.2 2 0 0 2 2 2 1 PAS domain DUF4817 PF16087.5 gi|15678486|ref|NP_275601.1| - 0.0009 19.0 0.8 0.029 14.2 0.3 2.1 1 1 1 2 2 2 1 Helix-turn-helix domain (DUF4817) MLTR_LBD PF17765.1 gi|15678486|ref|NP_275601.1| - 0.0031 17.7 0.0 0.0047 17.1 0.0 1.3 1 1 0 1 1 1 1 MmyB-like transcription regulator ligand binding domain PAS_8 PF13188.7 gi|15678486|ref|NP_275601.1| - 0.013 15.5 0.1 0.032 14.2 0.1 1.6 2 0 0 2 2 2 0 PAS domain HisKA_2 PF07568.12 gi|15678487|ref|NP_275602.1| - 1.1e-26 92.7 3.8 6e-26 90.3 3.6 2.3 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 gi|15678487|ref|NP_275602.1| - 1.7e-08 35.0 0.2 1.4e-07 32.0 0.1 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|15678487|ref|NP_275602.1| - 6.4e-06 26.8 1.0 1.6e-05 25.5 1.0 1.7 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|15678487|ref|NP_275602.1| - 0.015 15.3 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain GAF_2 PF13185.6 gi|15678487|ref|NP_275602.1| - 0.031 14.6 0.4 51 4.2 0.0 3.9 4 1 1 5 5 5 0 GAF domain PEP-utilizers_C PF02896.18 gi|15678488|ref|NP_275603.1| - 2.4e-50 171.3 0.0 3.2e-50 170.9 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|15678488|ref|NP_275603.1| - 7.9e-21 73.6 0.2 2.4e-20 72.0 0.2 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain GDPD_2 PF13653.6 gi|15678488|ref|NP_275603.1| - 0.044 14.2 0.0 3.5 8.2 0.0 2.5 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family Cas_VVA1548 PF09652.10 gi|15678489|ref|NP_275604.1| - 3.4e-32 110.5 0.1 4.3e-32 110.2 0.1 1.1 1 0 0 1 1 1 1 Putative CRISPR-associated protein (Cas_VVA1548) DUF86 PF01934.17 gi|15678491|ref|NP_275606.1| - 1.1e-26 93.0 2.6 1.4e-26 92.7 2.6 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 RhoGEF PF00621.20 gi|15678491|ref|NP_275606.1| - 0.01 16.1 0.3 0.029 14.6 0.3 1.6 1 1 0 1 1 1 0 RhoGEF domain Polbeta PF18765.1 gi|15678492|ref|NP_275607.1| - 2.4e-21 75.6 0.2 3.1e-21 75.3 0.2 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15678492|ref|NP_275607.1| - 1.4e-11 44.5 0.4 1.9e-11 44.1 0.4 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain SseB_C PF14581.6 gi|15678492|ref|NP_275607.1| - 0.0052 16.9 0.0 0.0069 16.5 0.0 1.2 1 0 0 1 1 1 1 SseB protein C-terminal domain Adenyl_cycl_N PF12633.7 gi|15678492|ref|NP_275607.1| - 0.0093 15.9 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF368 PF04018.13 gi|15678493|ref|NP_275608.1| - 6.5e-69 232.2 23.5 9.1e-69 231.8 23.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF368) DUF2374 PF09574.10 gi|15678493|ref|NP_275608.1| - 1.3 8.9 8.2 0.21 11.4 1.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) DUF2619 PF10942.8 gi|15678493|ref|NP_275608.1| - 3.1 7.9 10.3 0.57 10.3 3.1 3.3 3 2 0 3 3 3 0 Protein of unknown function (DUF2619) S1FA PF04689.13 gi|15678493|ref|NP_275608.1| - 7.7 6.7 6.4 1.5 9.0 1.7 2.3 2 0 0 2 2 2 0 DNA binding protein S1FA NERD PF08378.11 gi|15678494|ref|NP_275609.1| - 3.3e-23 82.2 0.0 6e-23 81.4 0.0 1.4 1 0 0 1 1 1 1 Nuclease-related domain DUF3040 PF11239.8 gi|15678494|ref|NP_275609.1| - 0.024 14.9 0.1 0.044 14.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) TFIIS_C PF01096.18 gi|15678494|ref|NP_275609.1| - 0.11 12.4 3.1 3.3 7.7 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_10 PF10058.9 gi|15678494|ref|NP_275609.1| - 0.13 12.0 2.5 0.24 11.2 2.5 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein DUF2207 PF09972.9 gi|15678494|ref|NP_275609.1| - 0.15 10.8 0.2 0.21 10.3 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RHH_1 PF01402.21 gi|15678495|ref|NP_275610.1| - 0.073 13.0 0.5 0.35 10.9 0.5 1.9 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family HisKA_2 PF07568.12 gi|15678496|ref|NP_275611.1| - 2.8e-28 97.8 4.2 1e-27 96.0 4.2 2.1 1 0 0 1 1 1 1 Histidine kinase PAS_9 PF13426.7 gi|15678496|ref|NP_275611.1| - 8.5e-14 51.7 0.3 7.5e-08 32.6 0.0 3.0 3 0 0 3 3 3 2 PAS domain PAS PF00989.25 gi|15678496|ref|NP_275611.1| - 1.1e-13 51.2 0.1 7.6e-09 35.6 0.0 2.8 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|15678496|ref|NP_275611.1| - 3.4e-13 49.8 0.3 5.1e-07 29.9 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.7 gi|15678496|ref|NP_275611.1| - 1.6e-12 47.1 0.1 1.5e-05 24.9 0.0 2.6 2 0 0 2 2 2 2 PAS domain HATPase_c PF02518.26 gi|15678496|ref|NP_275611.1| - 2.3e-11 44.2 0.0 5.5e-11 43.0 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.12 gi|15678496|ref|NP_275611.1| - 3.4e-09 36.9 0.1 1.1e-08 35.2 0.1 2.0 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|15678496|ref|NP_275611.1| - 6.1e-06 26.2 0.0 2e-05 24.5 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|15678496|ref|NP_275611.1| - 7e-06 26.7 0.3 1.8e-05 25.4 0.3 1.7 1 0 0 1 1 1 1 HWE histidine kinase tRNA-synt_2b PF00587.25 gi|15678496|ref|NP_275611.1| - 0.014 15.3 0.7 0.096 12.6 0.1 2.1 1 1 1 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) Tautomerase_2 PF14552.6 gi|15678496|ref|NP_275611.1| - 0.035 14.2 0.5 0.22 11.6 0.0 2.4 2 0 0 2 2 2 0 Tautomerase enzyme DUF169 PF02596.15 gi|15678497|ref|NP_275612.1| - 9.4e-49 166.1 0.0 1.1e-48 166.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 zinc_ribbon_2 PF13240.6 gi|15678498|ref|NP_275613.1| - 8.3e-07 28.5 3.8 1.1e-06 28.1 3.8 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15678498|ref|NP_275613.1| - 1.6e-06 27.3 2.0 2.2e-06 26.9 2.0 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15678498|ref|NP_275613.1| - 2.6e-05 24.1 0.3 3.2e-05 23.8 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|15678498|ref|NP_275613.1| - 0.00049 20.8 0.2 0.00051 20.7 0.2 1.1 1 0 0 1 1 1 1 zinc-ribbon family GFA PF04828.14 gi|15678498|ref|NP_275613.1| - 0.0016 18.7 1.0 0.23 11.8 0.0 2.0 1 1 1 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme UPF0547 PF10571.9 gi|15678498|ref|NP_275613.1| - 0.0021 18.1 1.1 0.0031 17.5 1.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 HypA PF01155.19 gi|15678498|ref|NP_275613.1| - 0.0038 17.2 0.1 0.0042 17.1 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_recom PF13408.6 gi|15678498|ref|NP_275613.1| - 0.0049 17.4 2.0 2.4 8.7 0.7 2.9 3 0 0 3 3 3 1 Recombinase zinc beta ribbon domain zf-NADH-PPase PF09297.11 gi|15678498|ref|NP_275613.1| - 0.006 16.2 0.2 1.7 8.4 0.1 2.3 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|15678498|ref|NP_275613.1| - 0.016 14.7 5.6 0.055 13.0 5.6 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zf-HIT PF04438.16 gi|15678498|ref|NP_275613.1| - 0.027 14.3 0.7 6.3 6.8 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger Elf1 PF05129.13 gi|15678498|ref|NP_275613.1| - 0.031 14.3 2.0 0.097 12.7 2.0 1.8 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zinc-ribbon_6 PF10005.9 gi|15678498|ref|NP_275613.1| - 0.042 14.5 0.5 0.063 14.0 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|15678498|ref|NP_275613.1| - 0.049 13.7 1.2 0.45 10.6 0.2 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain TackOD1 PF18551.1 gi|15678498|ref|NP_275613.1| - 0.057 13.1 0.1 0.066 12.9 0.1 1.0 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Nudix_N_2 PF14803.6 gi|15678498|ref|NP_275613.1| - 0.078 12.9 3.7 3.7 7.6 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-ACC PF17848.1 gi|15678498|ref|NP_275613.1| - 0.16 12.1 0.1 0.16 12.1 0.1 1.9 3 0 0 3 3 2 0 Acetyl-coA carboxylase zinc finger domain Zn-ribbon_8 PF09723.10 gi|15678498|ref|NP_275613.1| - 0.23 11.6 2.8 0.45 10.7 0.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15678498|ref|NP_275613.1| - 0.27 11.2 1.7 0.53 10.2 1.7 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain ADK_lid PF05191.14 gi|15678498|ref|NP_275613.1| - 0.3 11.1 2.3 4.1 7.5 2.1 2.2 1 1 1 2 2 2 0 Adenylate kinase, active site lid zf_UBZ PF18439.1 gi|15678498|ref|NP_275613.1| - 0.35 10.5 2.2 0.64 9.7 0.2 2.1 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-IS66 PF13005.7 gi|15678498|ref|NP_275613.1| - 1.1 9.7 8.2 12 6.4 0.5 3.6 3 1 1 4 4 4 0 zinc-finger binding domain of transposase IS66 DUF1232 PF06803.12 gi|15678499|ref|NP_275614.1| - 4.9e-10 39.0 0.2 4.9e-10 39.0 0.2 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1232) UvrD-helicase PF00580.21 gi|15678500|ref|NP_275615.1| - 2e-68 231.2 0.0 4e-67 227.0 0.0 2.2 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|15678500|ref|NP_275615.1| - 3.2e-52 178.0 0.0 5.5e-52 177.3 0.0 1.4 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|15678500|ref|NP_275615.1| - 7.7e-33 113.9 0.0 1.3e-32 113.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain PDDEXK_1 PF12705.7 gi|15678500|ref|NP_275615.1| - 2.2e-23 83.5 1.3 1.4e-22 80.8 0.6 2.2 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily UvrD_C_2 PF13538.6 gi|15678500|ref|NP_275615.1| - 3e-11 43.0 0.0 0.00028 20.6 0.0 2.5 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 gi|15678500|ref|NP_275615.1| - 1.6e-06 28.0 0.1 0.032 14.0 0.0 4.2 3 1 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|15678500|ref|NP_275615.1| - 1.7e-06 27.9 0.0 0.00095 18.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain Cas_Cas4 PF01930.17 gi|15678500|ref|NP_275615.1| - 4.8e-05 23.5 0.0 0.00016 21.9 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function DUF83 AAA_12 PF13087.6 gi|15678500|ref|NP_275615.1| - 0.00016 21.4 0.0 0.013 15.1 0.0 3.1 4 0 0 4 4 4 1 AAA domain AAA_11 PF13086.6 gi|15678500|ref|NP_275615.1| - 0.0024 17.7 0.1 0.0071 16.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain RPN7 PF10602.9 gi|15678500|ref|NP_275615.1| - 0.13 12.0 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 26S proteasome subunit RPN7 Zip PF02535.22 gi|15678501|ref|NP_275616.1| - 4.7e-15 55.6 25.3 6.2e-11 42.1 16.5 2.1 1 1 1 2 2 2 2 ZIP Zinc transporter Ferritin PF00210.24 gi|15678502|ref|NP_275617.1| - 2.6e-05 24.2 0.0 2.8e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain Cyt-b5 PF00173.28 gi|15678503|ref|NP_275618.1| - 1.1e-11 44.6 0.0 1.3e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TPP_enzyme_N PF02776.18 gi|15678504|ref|NP_275619.1| - 3.3e-50 170.1 2.9 1e-48 165.2 0.7 2.9 4 0 0 4 4 4 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15678504|ref|NP_275619.1| - 2.7e-32 111.4 0.1 4.4e-32 110.7 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|15678504|ref|NP_275619.1| - 9.9e-20 70.9 0.1 5.5e-10 39.2 0.0 3.5 2 1 1 3 3 3 2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Rubredoxin PF00301.20 gi|15678504|ref|NP_275619.1| - 1.4e-06 28.2 5.2 2.1e-05 24.5 5.2 2.4 1 1 0 1 1 1 1 Rubredoxin HypA PF01155.19 gi|15678504|ref|NP_275619.1| - 0.02 14.9 0.2 0.63 10.1 0.1 2.4 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Methyltransf_24 PF13578.6 gi|15678504|ref|NP_275619.1| - 0.053 14.6 0.0 1.4 10.0 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain Zn-ribbon_8 PF09723.10 gi|15678504|ref|NP_275619.1| - 0.16 12.1 0.7 0.45 10.7 0.7 1.7 1 0 0 1 1 1 0 Zinc ribbon domain PHD_4 PF16866.5 gi|15678504|ref|NP_275619.1| - 0.69 10.1 2.4 2.1 8.5 2.4 1.8 1 1 0 1 1 1 0 PHD-finger zf-RRN7 PF11781.8 gi|15678504|ref|NP_275619.1| - 0.71 9.6 2.4 10 5.9 0.2 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 ABC_tran PF00005.27 gi|15678505|ref|NP_275620.1| - 4.4e-33 114.7 0.0 7.3e-33 114.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|15678505|ref|NP_275620.1| - 3.7e-18 65.6 1.2 1.2e-17 63.9 0.2 2.4 3 0 0 3 3 3 1 TOBE domain AAA_21 PF13304.6 gi|15678505|ref|NP_275620.1| - 4.8e-10 39.7 0.3 0.00079 19.3 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|15678505|ref|NP_275620.1| - 5.6e-10 39.3 0.3 2.6e-09 37.1 0.1 2.2 2 0 0 2 2 2 1 TOBE domain SMC_N PF02463.19 gi|15678505|ref|NP_275620.1| - 3e-05 23.6 0.0 0.0048 16.4 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|15678505|ref|NP_275620.1| - 0.00065 19.9 0.2 0.0071 16.6 0.2 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TOBE_3 PF12857.7 gi|15678505|ref|NP_275620.1| - 0.0011 18.9 0.1 0.0044 16.9 0.0 2.1 3 0 0 3 3 3 1 TOBE-like domain AAA_29 PF13555.6 gi|15678505|ref|NP_275620.1| - 0.0032 17.2 0.0 0.0073 16.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain KdpD PF02702.17 gi|15678505|ref|NP_275620.1| - 0.007 15.9 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_22 PF13401.6 gi|15678505|ref|NP_275620.1| - 0.0073 16.6 0.4 0.11 12.7 0.4 2.2 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|15678505|ref|NP_275620.1| - 0.012 15.6 0.1 0.058 13.3 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 gi|15678505|ref|NP_275620.1| - 0.02 15.4 0.1 0.032 14.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|15678505|ref|NP_275620.1| - 0.042 12.6 0.0 0.062 12.1 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein eIF-1a PF01176.19 gi|15678505|ref|NP_275620.1| - 0.044 13.6 0.0 0.089 12.6 0.0 1.5 1 0 0 1 1 1 0 Translation initiation factor 1A / IF-1 AAA_16 PF13191.6 gi|15678505|ref|NP_275620.1| - 0.061 13.7 0.0 0.11 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain BPD_transp_1 PF00528.22 gi|15678506|ref|NP_275621.1| - 5.7e-15 55.5 15.2 7.3e-15 55.2 15.2 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Spore_YabQ PF09578.10 gi|15678506|ref|NP_275621.1| - 0.23 11.7 6.4 0.19 12.0 0.4 2.9 3 0 0 3 3 3 0 Spore cortex protein YabQ (Spore_YabQ) NicO PF03824.16 gi|15678506|ref|NP_275621.1| - 0.24 10.7 10.2 0.044 13.1 3.3 2.2 2 0 0 2 2 2 0 High-affinity nickel-transport protein FtsX PF02687.21 gi|15678506|ref|NP_275621.1| - 1.2 9.6 15.8 1.6 9.2 3.5 2.7 2 1 0 2 2 2 0 FtsX-like permease family PBP_like_2 PF12849.7 gi|15678507|ref|NP_275622.1| - 1.8e-25 90.2 0.4 2.4e-25 89.8 0.4 1.2 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|15678507|ref|NP_275622.1| - 1.7e-13 50.9 0.0 3.7e-13 49.7 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein LysR_substrate PF03466.20 gi|15678507|ref|NP_275622.1| - 9.8e-06 25.1 0.0 1.5e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain SBP_bac_1 PF01547.25 gi|15678507|ref|NP_275622.1| - 0.0016 18.5 4.7 0.03 14.3 4.7 2.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein ATP-cone PF03477.16 gi|15678508|ref|NP_275623.1| - 4.7e-10 39.9 1.0 4.9e-10 39.8 1.0 1.1 1 0 0 1 1 1 1 ATP cone domain DUF790 PF05626.11 gi|15678508|ref|NP_275623.1| - 0.042 12.6 0.1 0.051 12.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF790) E1-E2_ATPase PF00122.20 gi|15678509|ref|NP_275624.1| - 1.5e-44 151.7 0.3 1.5e-44 151.7 0.3 2.1 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 gi|15678509|ref|NP_275624.1| - 2.6e-14 52.6 0.1 5.3e-14 51.7 0.1 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|15678510|ref|NP_275625.1| - 1.5e-10 41.0 0.0 2e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Cation transport ATPase (P-type) DUF2238 PF09997.9 gi|15678511|ref|NP_275626.1| - 0.00087 19.1 1.5 0.00087 19.1 1.5 1.7 2 0 0 2 2 2 1 Predicted membrane protein (DUF2238) Cellulose_synt PF03552.14 gi|15678511|ref|NP_275626.1| - 0.43 9.0 2.6 0.61 8.5 2.6 1.1 1 0 0 1 1 1 0 Cellulose synthase DUF4231 PF14015.6 gi|15678511|ref|NP_275626.1| - 0.91 10.0 4.1 1.4 9.4 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF4131 PF13567.6 gi|15678511|ref|NP_275626.1| - 6.7 6.3 7.4 0.74 9.4 0.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Far-17a_AIG1 PF04750.14 gi|15678512|ref|NP_275627.1| - 0.012 14.9 4.0 0.013 14.8 4.0 1.0 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein CopD PF05425.13 gi|15678512|ref|NP_275627.1| - 0.019 15.3 0.9 0.019 15.3 0.9 2.1 2 0 0 2 2 2 0 Copper resistance protein D CoA_binding_3 PF13727.6 gi|15678512|ref|NP_275627.1| - 3 7.8 6.7 4.2 7.4 6.7 1.2 1 0 0 1 1 1 0 CoA-binding domain DUF1129 PF06570.11 gi|15678512|ref|NP_275627.1| - 8 5.9 8.6 9.2 5.7 8.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3320 PF11784.8 gi|15678514|ref|NP_275629.1| - 3.3e-16 59.0 1.3 5.1e-16 58.4 1.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3320) MTES_1575 PF18741.1 gi|15678515|ref|NP_275630.1| - 1.1e-26 92.9 0.1 2.5e-26 91.7 0.1 1.7 1 0 0 1 1 1 1 REase_MTES_1575 AAA_12 PF13087.6 gi|15678515|ref|NP_275630.1| - 2.1e-15 56.9 0.0 4.4e-15 55.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|15678515|ref|NP_275630.1| - 1.8e-13 50.9 0.0 1.1e-05 25.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|15678515|ref|NP_275630.1| - 2.6e-08 33.8 0.1 0.00028 20.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|15678515|ref|NP_275630.1| - 2.3e-07 31.3 0.0 0.00048 20.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 gi|15678515|ref|NP_275630.1| - 2.5e-06 27.0 0.0 0.0012 18.1 0.0 3.2 3 0 0 3 3 3 1 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|15678515|ref|NP_275630.1| - 0.00011 22.1 1.1 0.13 12.0 0.0 2.6 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase IstB_IS21 PF01695.17 gi|15678515|ref|NP_275630.1| - 0.00028 20.7 0.0 0.00067 19.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein RAP PF08373.10 gi|15678515|ref|NP_275630.1| - 0.0018 18.3 0.1 0.0043 17.1 0.1 1.6 1 0 0 1 1 1 1 RAP domain ResIII PF04851.15 gi|15678515|ref|NP_275630.1| - 0.0029 17.7 0.0 0.091 12.8 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UvrD-helicase PF00580.21 gi|15678515|ref|NP_275630.1| - 0.0055 16.3 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 gi|15678515|ref|NP_275630.1| - 0.0082 16.5 0.1 0.046 14.1 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain Helicase_RecD PF05127.14 gi|15678515|ref|NP_275630.1| - 0.021 14.7 0.0 0.69 9.7 0.0 2.3 2 0 0 2 2 2 0 Helicase AAA PF00004.29 gi|15678515|ref|NP_275630.1| - 0.045 14.2 0.1 1 9.8 0.0 3.1 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) FtsK_SpoIIIE PF01580.18 gi|15678515|ref|NP_275630.1| - 0.047 13.0 0.0 0.12 11.7 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF559 PF04480.12 gi|15678515|ref|NP_275630.1| - 0.063 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF559) Adeno_IVa2 PF02456.15 gi|15678515|ref|NP_275630.1| - 0.078 11.8 0.0 0.14 10.9 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_7 PF12775.7 gi|15678515|ref|NP_275630.1| - 0.093 12.2 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|15678515|ref|NP_275630.1| - 0.096 13.0 0.0 0.48 10.7 0.0 2.3 2 0 0 2 2 1 0 AAA domain GvpD PF07088.11 gi|15678515|ref|NP_275630.1| - 0.12 11.0 0.0 0.2 10.3 0.0 1.2 1 0 0 1 1 1 0 GvpD gas vesicle protein AAA_5 PF07728.14 gi|15678515|ref|NP_275630.1| - 0.12 12.4 0.0 0.61 10.1 0.0 2.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF530 PF04409.12 gi|15678515|ref|NP_275630.1| - 0.13 10.6 0.6 0.9 7.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF530) MeaB PF03308.16 gi|15678515|ref|NP_275630.1| - 0.15 11.0 0.0 0.3 10.0 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PIF1 PF05970.14 gi|15678515|ref|NP_275630.1| - 0.17 11.0 0.0 0.38 9.9 0.0 1.5 1 0 0 1 1 1 0 PIF1-like helicase RNA_helicase PF00910.22 gi|15678515|ref|NP_275630.1| - 0.24 11.8 0.0 1.5 9.2 0.0 2.3 3 0 0 3 3 3 0 RNA helicase ALIX_LYPXL_bnd PF13949.6 gi|15678515|ref|NP_275630.1| - 0.95 8.7 3.4 2.9 7.1 0.0 2.8 3 0 0 3 3 3 0 ALIX V-shaped domain binding to HIV DUF4011 PF13195.6 gi|15678516|ref|NP_275631.1| - 5.6e-48 162.9 0.2 6.9e-48 162.6 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4011) RNase_H_2 PF13482.6 gi|15678519|ref|NP_275634.1| - 4.3e-31 108.2 0.0 6.3e-31 107.6 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo1 PF03104.19 gi|15678519|ref|NP_275634.1| - 0.00048 19.4 0.1 0.00085 18.6 0.1 1.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|15678519|ref|NP_275634.1| - 0.0089 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_lambd_f PF10391.9 gi|15678519|ref|NP_275634.1| - 0.16 11.8 0.0 0.38 10.6 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda DEAD PF00270.29 gi|15678520|ref|NP_275635.1| - 1.1e-27 96.9 0.0 1.8e-27 96.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|15678520|ref|NP_275635.1| - 3.5e-21 75.7 0.1 9.8e-21 74.3 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|15678520|ref|NP_275635.1| - 1.6e-11 44.5 0.0 4.8e-11 43.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15678520|ref|NP_275635.1| - 5.3e-07 29.8 0.0 1.3e-06 28.6 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TPR_19 PF14559.6 gi|15678520|ref|NP_275635.1| - 0.0016 18.9 0.0 0.0036 17.8 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat T2SSE PF00437.20 gi|15678520|ref|NP_275635.1| - 0.097 11.7 0.0 0.19 10.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TPR_7 PF13176.6 gi|15678520|ref|NP_275635.1| - 0.14 12.3 0.1 0.48 10.6 0.1 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat DJ-1_PfpI PF01965.24 gi|15678521|ref|NP_275636.1| - 0.00093 19.0 0.0 0.0015 18.4 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family SNase PF00565.17 gi|15678522|ref|NP_275637.1| - 5.2e-17 62.3 0.0 8.5e-17 61.6 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue SpoIIIAH PF12685.7 gi|15678522|ref|NP_275637.1| - 0.093 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein LPAM_1 PF08139.12 gi|15678522|ref|NP_275637.1| - 0.23 12.0 4.0 0.37 11.4 4.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DNA_methylase PF00145.17 gi|15678523|ref|NP_275638.1| - 1e-59 202.6 0.3 1.5e-53 182.4 0.2 2.1 2 0 0 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|15678523|ref|NP_275638.1| - 0.021 14.4 0.0 0.053 13.1 0.0 1.7 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase HhH-GPD PF00730.25 gi|15678524|ref|NP_275639.1| - 4.3e-08 33.6 0.0 5.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|15678524|ref|NP_275639.1| - 0.011 15.6 0.0 0.029 14.2 0.0 1.7 2 0 0 2 2 2 0 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|15678524|ref|NP_275639.1| - 0.64 10.4 5.1 1.7 9.1 5.1 1.8 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III Helicase_C PF00271.31 gi|15678525|ref|NP_275640.1| - 8.3e-07 29.3 0.0 2.4e-06 27.9 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PRESAN PF09687.10 gi|15678525|ref|NP_275640.1| - 0.18 12.3 4.6 0.13 12.8 0.6 2.5 2 0 0 2 2 2 0 Plasmodium RESA N-terminal K-box PF01486.17 gi|15678525|ref|NP_275640.1| - 0.6 10.3 1.9 1.3 9.3 0.3 2.2 2 0 0 2 2 2 0 K-box region DUF1998 PF09369.10 gi|15678526|ref|NP_275641.1| - 5.8e-05 23.8 0.2 5.8e-05 23.8 0.2 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) zf-ribbon_3 PF13248.6 gi|15678526|ref|NP_275641.1| - 0.19 11.2 3.6 7.5 6.1 0.4 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-tcix PF14952.6 gi|15678526|ref|NP_275641.1| - 0.43 10.2 7.4 22 4.8 0.0 3.4 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.7 gi|15678527|ref|NP_275642.1| - 0.055 13.4 0.2 0.15 12.1 0.2 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15678527|ref|NP_275642.1| - 0.12 11.9 1.7 0.34 10.4 1.7 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|15678527|ref|NP_275642.1| - 0.68 9.4 2.5 11 5.6 0.5 2.6 2 0 0 2 2 2 0 zinc-ribbon domain AAA_5 PF07728.14 gi|15678529|ref|NP_275644.1| - 8.8e-08 32.2 0.0 1.9e-07 31.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|15678529|ref|NP_275644.1| - 0.0019 18.5 0.0 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15678529|ref|NP_275644.1| - 0.003 18.0 0.0 0.051 14.0 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|15678529|ref|NP_275644.1| - 0.019 15.4 0.0 0.079 13.4 0.0 2.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|15678529|ref|NP_275644.1| - 0.024 14.3 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain PhoH PF02562.16 gi|15678529|ref|NP_275644.1| - 0.068 12.6 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 gi|15678529|ref|NP_275644.1| - 0.19 11.5 0.0 0.53 10.0 0.0 1.7 1 1 0 1 1 1 0 IstB-like ATP binding protein DUF2357 PF09823.9 gi|15678530|ref|NP_275645.1| - 3e-61 206.9 0.0 3.8e-61 206.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) PDDEXK_7 PF04411.12 gi|15678530|ref|NP_275645.1| - 8.6e-39 133.2 0.0 1.2e-38 132.7 0.0 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Robl_LC7 PF03259.17 gi|15678531|ref|NP_275646.1| - 2.3e-19 69.0 0.2 3e-19 68.6 0.2 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain HMD PF03201.16 gi|15678532|ref|NP_275647.1| - 1.8e-40 137.0 3.3 3.4e-40 136.2 3.3 1.5 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.15 gi|15678532|ref|NP_275647.1| - 6e-05 23.3 0.1 0.0002 21.6 0.0 1.9 1 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|15678532|ref|NP_275647.1| - 0.0059 17.2 0.0 0.034 14.7 0.0 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent SK_channel PF03530.14 gi|15678532|ref|NP_275647.1| - 0.19 11.7 0.3 0.61 10.1 0.1 1.8 2 0 0 2 2 2 0 Calcium-activated SK potassium channel Ion_trans_2 PF07885.16 gi|15678533|ref|NP_275648.1| - 1.9e-11 43.7 10.0 1.9e-11 43.7 10.0 2.9 3 0 0 3 3 3 1 Ion channel Ion_trans PF00520.31 gi|15678533|ref|NP_275648.1| - 2.3e-07 30.3 9.6 3.3e-07 29.8 9.6 1.2 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 gi|15678533|ref|NP_275648.1| - 0.0072 16.2 0.4 0.016 15.1 0.4 1.5 1 0 0 1 1 1 1 Ligand-gated ion channel SUR7 PF06687.12 gi|15678533|ref|NP_275648.1| - 0.068 12.8 1.3 0.22 11.1 0.7 2.0 1 1 0 2 2 2 0 SUR7/PalI family MetOD2 PF18548.1 gi|15678533|ref|NP_275648.1| - 0.097 12.8 0.6 0.15 12.1 0.6 1.2 1 0 0 1 1 1 0 Metanogen output domain 2 HalX PF08663.10 gi|15678533|ref|NP_275648.1| - 0.19 12.1 4.2 0.29 11.5 4.2 1.3 1 0 0 1 1 1 0 HalX domain NrsF PF06532.11 gi|15678533|ref|NP_275648.1| - 0.19 11.4 13.4 0.033 13.9 3.5 3.1 2 1 1 3 3 3 0 Negative regulator of sigma F ABC_tran_CTD PF16326.5 gi|15678533|ref|NP_275648.1| - 0.5 10.6 2.2 0.89 9.9 2.1 1.4 1 1 0 1 1 1 0 ABC transporter C-terminal domain YbjQ_1 PF01906.17 gi|15678534|ref|NP_275649.1| - 3.7e-07 30.7 0.3 6.4e-07 30.0 0.3 1.4 1 0 0 1 1 1 1 Putative heavy-metal-binding Phage_holin_2_1 PF04971.12 gi|15678534|ref|NP_275649.1| - 0.044 13.8 4.4 0.52 10.3 0.1 2.9 2 1 0 2 2 2 0 Bacteriophage P21 holin S MatC_N PF07158.11 gi|15678534|ref|NP_275649.1| - 2 8.4 10.5 0.47 10.5 2.1 2.3 1 1 1 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus YbjQ_1 PF01906.17 gi|15678535|ref|NP_275650.1| - 3.1e-30 104.9 0.2 3.6e-30 104.7 0.2 1.1 1 0 0 1 1 1 1 Putative heavy-metal-binding PsbP PF01789.16 gi|15678536|ref|NP_275651.1| - 3.5e-05 24.0 0.8 0.00013 22.2 0.8 1.8 1 1 0 1 1 1 1 PsbP Thymopoietin PF08198.11 gi|15678536|ref|NP_275651.1| - 0.18 11.5 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Thymopoietin protein PDDEXK_1 PF12705.7 gi|15678538|ref|NP_275653.1| - 7.9e-25 88.2 0.3 2.3e-24 86.7 0.1 1.9 2 1 0 2 2 2 1 PD-(D/E)XK nuclease superfamily HEAT_2 PF13646.6 gi|15678538|ref|NP_275653.1| - 3.9e-09 36.8 1.1 1.1e-08 35.3 0.5 2.0 2 0 0 2 2 2 1 HEAT repeats HEAT_PBS PF03130.16 gi|15678538|ref|NP_275653.1| - 0.011 16.4 1.4 0.011 16.4 1.4 2.7 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|15678538|ref|NP_275653.1| - 0.03 14.6 0.0 1.1 9.7 0.0 2.7 2 0 0 2 2 2 0 HEAT repeat Dna2 PF08696.11 gi|15678538|ref|NP_275653.1| - 0.034 14.0 0.0 0.053 13.3 0.0 1.2 1 0 0 1 1 1 0 DNA replication factor Dna2 UvrD_C PF13361.6 gi|15678539|ref|NP_275654.1| - 2.1e-75 254.3 0.0 9.1e-74 248.9 0.0 2.3 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD-helicase PF00580.21 gi|15678539|ref|NP_275654.1| - 7.5e-75 252.4 0.0 1.4e-73 248.2 0.0 2.2 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|15678539|ref|NP_275654.1| - 4.7e-34 117.8 0.0 9.5e-34 116.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|15678539|ref|NP_275654.1| - 3.7e-10 39.5 0.0 0.0018 18.1 0.0 3.0 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|15678539|ref|NP_275654.1| - 3e-09 36.9 0.0 8.9e-07 28.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_12 PF13087.6 gi|15678539|ref|NP_275654.1| - 4.9e-06 26.3 0.1 0.31 10.6 0.0 3.2 3 0 0 3 3 3 2 AAA domain Viral_helicase1 PF01443.18 gi|15678539|ref|NP_275654.1| - 2.9e-05 23.9 0.1 6.1 6.5 0.0 4.4 4 1 0 4 4 4 1 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 gi|15678539|ref|NP_275654.1| - 0.00051 19.9 0.0 0.0008 19.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain Exonuc_V_gamma PF04257.14 gi|15678539|ref|NP_275654.1| - 0.027 12.7 0.3 0.079 11.2 0.1 1.7 2 0 0 2 2 2 0 Exodeoxyribonuclease V, gamma subunit AAA_16 PF13191.6 gi|15678539|ref|NP_275654.1| - 0.086 13.2 0.0 0.18 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain CarboxypepD_reg PF13620.6 gi|15678541|ref|NP_275656.1| - 3e-05 24.2 1.3 6.1e-05 23.2 0.8 1.7 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|15678541|ref|NP_275656.1| - 0.0026 17.7 0.0 0.0092 16.0 0.1 1.9 2 0 0 2 2 2 1 CarboxypepD_reg-like domain Lipoprotein_1 PF00820.19 gi|15678541|ref|NP_275656.1| - 0.1 11.6 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein bMG3 PF11974.8 gi|15678541|ref|NP_275656.1| - 0.1 12.6 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial alpha-2-macroglobulin MG3 domain CobN-Mg_chel PF02514.16 gi|15678542|ref|NP_275657.1| - 1.3e-215 718.6 0.0 1.7e-215 718.2 0.0 1.1 1 0 0 1 1 1 1 CobN/Magnesium Chelatase DUF1180 PF06679.12 gi|15678543|ref|NP_275658.1| - 1.9 8.9 4.1 2.5 8.5 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) AAA_16 PF13191.6 gi|15678544|ref|NP_275659.1| - 2.9e-08 34.3 0.0 4e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|15678544|ref|NP_275659.1| - 9.8e-05 22.4 0.0 0.00022 21.2 0.0 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|15678544|ref|NP_275659.1| - 0.00081 19.4 0.0 0.0015 18.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|15678544|ref|NP_275659.1| - 0.0026 17.1 0.0 0.0043 16.4 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|15678544|ref|NP_275659.1| - 0.0047 17.2 0.0 0.009 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15678544|ref|NP_275659.1| - 0.012 16.2 0.0 0.099 13.2 0.0 2.2 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|15678544|ref|NP_275659.1| - 0.014 15.1 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA PF00004.29 gi|15678544|ref|NP_275659.1| - 0.015 15.7 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|15678544|ref|NP_275659.1| - 0.034 14.1 0.0 0.55 10.1 0.1 2.2 2 0 0 2 2 2 0 NACHT domain Viral_helicase1 PF01443.18 gi|15678544|ref|NP_275659.1| - 0.053 13.3 0.0 0.18 11.5 0.0 1.8 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NB-ARC PF00931.22 gi|15678544|ref|NP_275659.1| - 0.057 12.6 0.0 0.11 11.7 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 gi|15678544|ref|NP_275659.1| - 0.099 12.8 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|15678544|ref|NP_275659.1| - 0.12 11.1 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein cobW PF02492.19 gi|15678544|ref|NP_275659.1| - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|15678544|ref|NP_275659.1| - 0.13 11.9 0.0 0.27 10.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15678544|ref|NP_275659.1| - 0.14 11.2 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_23 PF13476.6 gi|15678544|ref|NP_275659.1| - 0.18 12.3 0.0 0.28 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF1887 PF09002.11 gi|15678545|ref|NP_275660.1| - 4.5e-07 28.9 0.1 6.7e-07 28.3 0.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF1887) Cas_APE2256 PF09651.10 gi|15678545|ref|NP_275660.1| - 7.2e-07 29.2 0.0 1.2e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_APE2256) TrmB PF01978.19 gi|15678545|ref|NP_275660.1| - 6.6e-06 25.9 0.1 2.5e-05 24.0 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15678545|ref|NP_275660.1| - 6.9e-06 25.5 0.1 1.1e-05 24.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15678545|ref|NP_275660.1| - 7.8e-06 25.7 0.0 1.2e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Cas_Cas02710 PF09670.10 gi|15678545|ref|NP_275660.1| - 9.7e-06 24.6 0.0 1.4e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) Cas_NE0113 PF09623.10 gi|15678545|ref|NP_275660.1| - 6e-05 22.8 0.1 0.00011 22.0 0.1 1.5 1 1 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) HTH_11 PF08279.12 gi|15678545|ref|NP_275660.1| - 0.00016 21.6 0.1 0.00031 20.6 0.1 1.5 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|15678545|ref|NP_275660.1| - 0.00036 20.4 0.1 0.00066 19.6 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|15678545|ref|NP_275660.1| - 0.0006 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HxlR PF01638.17 gi|15678545|ref|NP_275660.1| - 0.0086 15.9 0.1 0.017 15.0 0.1 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_28 PF13518.6 gi|15678545|ref|NP_275660.1| - 0.0096 16.0 0.0 0.02 15.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|15678545|ref|NP_275660.1| - 0.024 14.5 0.0 0.046 13.6 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|15678545|ref|NP_275660.1| - 0.056 13.4 0.1 0.14 12.2 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF2085 PF09858.9 gi|15678546|ref|NP_275661.1| - 3.2e-32 110.9 1.1 3.8e-32 110.6 1.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2085) DUF4199 PF13858.6 gi|15678546|ref|NP_275661.1| - 0.07 13.5 4.6 0.089 13.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) LIFR_D2 PF17971.1 gi|15678547|ref|NP_275662.1| - 0.094 12.9 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor D2 domain DUF4064 PF13273.6 gi|15678548|ref|NP_275663.1| - 9.8e-13 48.3 13.7 9.8e-13 48.3 13.7 2.7 2 1 0 2 2 2 1 Protein of unknown function (DUF4064) DUF2070 PF09843.9 gi|15678548|ref|NP_275663.1| - 0.85 7.8 5.1 0.92 7.7 5.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Trep_Strep PF09605.10 gi|15678548|ref|NP_275663.1| - 2.4 8.1 14.7 3.4 7.6 14.7 1.2 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) zinc_ribbon_2 PF13240.6 gi|15678549|ref|NP_275664.1| - 2e-08 33.7 3.3 2.9e-08 33.1 3.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15678549|ref|NP_275664.1| - 2.2e-06 26.9 1.2 3.2e-06 26.3 1.2 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15678549|ref|NP_275664.1| - 7.6e-06 25.9 0.9 1.1e-05 25.4 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|15678549|ref|NP_275664.1| - 0.0096 15.4 0.8 0.024 14.2 0.8 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Zn_ribbon_17 PF17120.5 gi|15678549|ref|NP_275664.1| - 0.04 13.5 0.2 0.06 13.0 0.2 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-NADH-PPase PF09297.11 gi|15678549|ref|NP_275664.1| - 0.13 12.0 3.4 0.9 9.3 0.8 2.4 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|15678549|ref|NP_275664.1| - 0.15 11.7 2.5 2.7 7.6 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Nudix_N_2 PF14803.6 gi|15678549|ref|NP_275664.1| - 0.16 11.9 2.6 1.7 8.6 0.2 2.2 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_15 PF17032.5 gi|15678549|ref|NP_275664.1| - 0.35 11.6 2.8 0.66 10.8 2.8 1.4 1 0 0 1 1 1 0 zinc-ribbon family YhfH PF14149.6 gi|15678549|ref|NP_275664.1| - 0.4 10.7 2.5 3.6 7.6 0.2 2.2 2 0 0 2 2 2 0 YhfH-like protein OrfB_Zn_ribbon PF07282.11 gi|15678549|ref|NP_275664.1| - 0.64 10.0 3.4 1.3 9.0 3.4 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-tcix PF14952.6 gi|15678549|ref|NP_275664.1| - 1.2 8.8 4.1 5.3 6.7 4.4 1.8 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding A2L_zn_ribbon PF08792.10 gi|15678549|ref|NP_275664.1| - 2.8 7.8 4.7 36 4.2 4.7 2.1 1 1 0 1 1 1 0 A2L zinc ribbon domain PMBR PF09373.10 gi|15678551|ref|NP_275666.1| - 4e-16 58.3 0.0 2.8e-09 36.7 0.0 2.7 3 0 0 3 3 3 2 Pseudomurein-binding repeat DUF2749 PF10907.8 gi|15678551|ref|NP_275666.1| - 0.094 12.9 0.9 0.19 11.9 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) Zn-ribbon_8 PF09723.10 gi|15678553|ref|NP_275668.1| - 0.00088 19.3 0.8 0.28 11.3 0.2 2.1 2 0 0 2 2 2 2 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|15678553|ref|NP_275668.1| - 0.00093 18.8 1.9 0.64 9.7 0.1 2.3 2 0 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit RNHCP PF12647.7 gi|15678553|ref|NP_275668.1| - 0.001 19.0 0.1 0.0012 18.8 0.1 1.1 1 0 0 1 1 1 1 RNHCP domain DUF35_N PF12172.8 gi|15678553|ref|NP_275668.1| - 0.0052 16.6 2.4 0.063 13.2 0.1 2.1 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Desulfoferrod_N PF06397.12 gi|15678553|ref|NP_275668.1| - 0.007 16.0 0.9 2.9 7.6 0.1 2.3 2 0 0 2 2 2 2 Desulfoferrodoxin, N-terminal domain RecR PF02132.15 gi|15678553|ref|NP_275668.1| - 0.015 14.8 0.9 1.3 8.6 0.1 2.1 2 0 0 2 2 2 0 RecR protein Rubredoxin_2 PF18073.1 gi|15678553|ref|NP_275668.1| - 0.017 14.9 5.4 0.034 13.9 0.7 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain Ribosomal_L32p PF01783.23 gi|15678553|ref|NP_275668.1| - 0.035 14.3 0.1 6.7 7.0 0.0 2.1 2 0 0 2 2 2 0 Ribosomal L32p protein family Methyltransf_13 PF08421.11 gi|15678553|ref|NP_275668.1| - 0.083 13.1 0.4 0.2 11.9 0.0 1.7 1 1 1 2 2 2 0 Putative zinc binding domain HypA PF01155.19 gi|15678553|ref|NP_275668.1| - 0.11 12.5 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 gi|15678553|ref|NP_275668.1| - 0.13 12.2 1.6 6.3 6.8 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-CCHC_6 PF15288.6 gi|15678553|ref|NP_275668.1| - 1.4 8.8 4.7 15 5.5 0.7 2.2 2 0 0 2 2 2 0 Zinc knuckle DUF169 PF02596.15 gi|15678554|ref|NP_275669.1| - 1.7e-60 204.5 0.1 1.9e-60 204.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF16 PF01519.16 gi|15678555|ref|NP_275670.1| - 0.0069 16.8 0.6 0.0076 16.7 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF16 NTP_transf_3 PF12804.7 gi|15678556|ref|NP_275671.1| - 2.1e-24 86.7 3.1 2.6e-24 86.4 3.1 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|15678556|ref|NP_275671.1| - 9.7e-07 28.7 1.3 1.4e-06 28.3 1.3 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|15678556|ref|NP_275671.1| - 0.00087 19.3 0.0 0.0012 18.8 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transferase PF00483.23 gi|15678556|ref|NP_275671.1| - 0.0064 16.1 0.0 0.0095 15.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Glycos_transf_2 PF00535.26 gi|15678556|ref|NP_275671.1| - 0.016 15.0 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 2 Amidohydro_1 PF01979.20 gi|15678556|ref|NP_275671.1| - 0.09 12.1 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase family VanW PF04294.13 gi|15678557|ref|NP_275672.1| - 0.0056 16.4 0.0 2.7 7.7 0.0 2.4 2 0 0 2 2 2 2 VanW like protein Mur_ligase_M PF08245.12 gi|15678558|ref|NP_275673.1| - 6.9e-27 94.7 0.0 2.8e-18 66.6 0.0 4.0 4 0 0 4 4 4 3 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|15678558|ref|NP_275673.1| - 3.7e-22 78.4 0.5 3.1e-09 37.0 0.1 3.8 4 0 0 4 4 4 2 Mur ligase family, glutamate ligase domain DsrH PF04077.12 gi|15678558|ref|NP_275673.1| - 0.0034 17.5 0.0 0.35 11.0 0.0 2.4 2 0 0 2 2 2 1 DsrH like protein Zn_Tnp_IS1595 PF12760.7 gi|15678558|ref|NP_275673.1| - 0.56 10.2 2.1 1.1 9.2 2.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Mur_ligase_M PF08245.12 gi|15678559|ref|NP_275674.1| - 5e-19 69.0 0.0 7.9e-19 68.4 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain AlaDh_PNT_C PF01262.21 gi|15678559|ref|NP_275674.1| - 0.00089 18.6 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|15678559|ref|NP_275674.1| - 0.0098 15.3 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|15678559|ref|NP_275674.1| - 0.029 14.9 0.0 0.048 14.2 0.0 1.5 1 0 0 1 1 1 0 XdhC Rossmann domain Pyr_redox_2 PF07992.14 gi|15678559|ref|NP_275674.1| - 0.049 12.9 0.0 0.08 12.2 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|15678559|ref|NP_275674.1| - 0.17 11.5 0.0 0.4 10.2 0.0 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Mur_ligase_M PF08245.12 gi|15678560|ref|NP_275675.1| - 1.1e-24 87.5 0.1 5.5e-24 85.2 0.0 1.9 2 1 1 3 3 3 1 Mur ligase middle domain B12-binding PF02310.19 gi|15678560|ref|NP_275675.1| - 0.0011 19.0 0.1 0.17 12.0 0.0 3.1 3 0 0 3 3 3 1 B12 binding domain Mur_ligase_C PF02875.21 gi|15678560|ref|NP_275675.1| - 0.0029 17.8 0.0 0.045 14.0 0.0 2.6 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain AlaDh_PNT_C PF01262.21 gi|15678560|ref|NP_275675.1| - 0.049 12.9 0.1 0.088 12.1 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AAA_31 PF13614.6 gi|15678560|ref|NP_275675.1| - 0.068 13.1 0.8 0.28 11.1 0.2 2.1 2 0 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|15678560|ref|NP_275675.1| - 0.074 13.1 1.9 0.26 11.3 0.8 2.3 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain MHYT PF03707.16 gi|15678561|ref|NP_275676.1| - 0.013 15.6 0.8 0.015 15.4 0.8 1.1 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat EphA2_TM PF14575.6 gi|15678561|ref|NP_275676.1| - 0.049 14.5 0.0 0.057 14.3 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Peptidase_S49_N PF08496.10 gi|15678561|ref|NP_275676.1| - 0.063 13.3 0.1 0.069 13.2 0.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CM2 PF03021.14 gi|15678561|ref|NP_275676.1| - 0.1 12.5 0.2 0.12 12.2 0.2 1.0 1 0 0 1 1 1 0 Influenza C virus M2 protein ODV-E18 PF10717.9 gi|15678561|ref|NP_275676.1| - 0.1 12.4 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Class_IIIsignal PF04021.12 gi|15678562|ref|NP_275677.1| - 7.7e-08 32.1 5.7 1.2e-07 31.4 5.7 1.3 1 0 0 1 1 1 1 Class III signal peptide PMSR PF01625.21 gi|15678563|ref|NP_275678.1| - 2.5e-68 229.1 0.0 3e-68 228.8 0.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase POR_N PF01855.19 gi|15678564|ref|NP_275679.1| - 2.2e-65 220.7 0.0 3e-65 220.2 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|15678564|ref|NP_275679.1| - 2.6e-13 50.4 0.3 1.3e-12 48.2 0.3 2.0 1 1 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.18 gi|15678564|ref|NP_275679.1| - 0.004 16.8 0.2 0.008 15.8 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15678565|ref|NP_275680.1| - 5.4e-28 97.7 0.1 7.8e-28 97.2 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|15678565|ref|NP_275680.1| - 9.5e-21 73.7 0.0 2e-20 72.7 0.0 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal O-antigen_lig PF13425.6 gi|15678567|ref|NP_275682.1| - 0.2 10.4 4.3 0.24 10.1 4.3 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein AAA_23 PF13476.6 gi|15678568|ref|NP_275683.1| - 5e-13 50.0 29.2 5e-13 50.0 29.2 6.1 2 1 2 5 5 2 1 AAA domain AAA_15 PF13175.6 gi|15678568|ref|NP_275683.1| - 5e-13 49.5 21.8 3.5e-10 40.1 0.2 3.0 1 1 1 2 2 2 1 AAA ATPase domain DUF3584 PF12128.8 gi|15678568|ref|NP_275683.1| - 8.3e-07 27.0 57.1 0.00046 17.9 25.7 3.1 3 0 0 3 3 3 2 Protein of unknown function (DUF3584) SMC_N PF02463.19 gi|15678568|ref|NP_275683.1| - 1.6e-05 24.5 32.1 2.7e-05 23.7 32.1 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15678568|ref|NP_275683.1| - 4e-05 23.3 0.0 7.5e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|15678568|ref|NP_275683.1| - 0.00063 19.9 0.2 0.0065 16.7 0.0 2.5 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Baculo_PEP_C PF04513.12 gi|15678568|ref|NP_275683.1| - 0.0018 18.3 12.5 4.4 7.4 0.8 6.1 2 2 4 6 6 6 1 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 gi|15678568|ref|NP_275683.1| - 0.003 17.8 54.6 0.045 14.1 3.6 7.8 4 2 4 9 9 8 5 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA_21 PF13304.6 gi|15678568|ref|NP_275683.1| - 0.0056 16.5 31.0 0.056 13.2 12.0 4.5 2 2 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system GAS PF13851.6 gi|15678568|ref|NP_275683.1| - 0.0056 16.1 16.0 0.0056 16.1 16.0 5.5 3 2 1 5 5 5 3 Growth-arrest specific micro-tubule binding Golgin_A5 PF09787.9 gi|15678568|ref|NP_275683.1| - 0.0061 16.1 19.9 0.0061 16.1 19.9 4.6 2 2 3 5 5 5 1 Golgin subfamily A member 5 AAA_13 PF13166.6 gi|15678568|ref|NP_275683.1| - 0.0062 15.2 60.2 0.44 9.1 0.1 4.7 2 1 2 4 4 4 2 AAA domain DUF5082 PF16888.5 gi|15678568|ref|NP_275683.1| - 0.0064 16.8 15.6 0.0064 16.8 15.6 7.7 4 2 3 8 8 8 1 Domain of unknown function (DUF5082) T3SSipB PF16535.5 gi|15678568|ref|NP_275683.1| - 0.0077 16.7 17.2 1.1 9.7 1.0 5.2 2 2 3 5 5 5 2 Type III cell invasion protein SipB DUF4200 PF13863.6 gi|15678568|ref|NP_275683.1| - 0.012 16.0 81.5 0.2 12.1 0.2 7.1 2 2 3 6 6 6 0 Domain of unknown function (DUF4200) DUF3450 PF11932.8 gi|15678568|ref|NP_275683.1| - 0.023 14.0 53.1 0.13 11.5 8.1 6.5 1 1 4 6 6 6 0 Protein of unknown function (DUF3450) APG6_N PF17675.1 gi|15678568|ref|NP_275683.1| - 0.052 14.1 90.1 0.033 14.7 13.2 6.4 3 2 3 6 6 5 0 Apg6 coiled-coil region Spc7 PF08317.11 gi|15678568|ref|NP_275683.1| - 0.064 12.1 82.7 0.018 13.9 11.7 5.9 3 2 3 6 6 6 0 Spc7 kinetochore protein Tup_N PF08581.10 gi|15678568|ref|NP_275683.1| - 0.083 13.2 0.2 0.083 13.2 0.2 7.9 4 2 5 9 9 9 0 Tup N-terminal FUSC PF04632.12 gi|15678568|ref|NP_275683.1| - 0.18 10.3 20.8 0.0057 15.3 3.4 3.0 2 1 1 3 3 3 0 Fusaric acid resistance protein family MAD PF05557.13 gi|15678568|ref|NP_275683.1| - 0.27 9.6 77.0 0.056 11.8 2.4 4.2 3 2 1 4 4 4 0 Mitotic checkpoint protein DALR_1 PF05746.15 gi|15678568|ref|NP_275683.1| - 0.3 11.3 0.0 0.3 11.3 0.0 3.2 4 0 0 4 4 3 0 DALR anticodon binding domain Occludin_ELL PF07303.13 gi|15678568|ref|NP_275683.1| - 0.36 11.6 43.4 1.1 10.1 0.0 7.8 3 2 6 9 9 8 0 Occludin homology domain DUF1664 PF07889.12 gi|15678568|ref|NP_275683.1| - 0.42 10.7 41.0 2.8 8.0 6.8 7.3 2 2 7 9 9 9 0 Protein of unknown function (DUF1664) WXG100 PF06013.12 gi|15678568|ref|NP_275683.1| - 0.6 10.4 6.9 39 4.6 0.2 6.3 4 3 1 5 5 4 0 Proteins of 100 residues with WXG AAA_22 PF13401.6 gi|15678568|ref|NP_275683.1| - 0.97 9.7 11.2 2.6 8.3 0.1 4.1 4 0 0 4 4 4 0 AAA domain IL11 PF07400.11 gi|15678568|ref|NP_275683.1| - 1.4 8.5 5.8 6.8 6.3 0.2 3.4 2 2 2 4 4 4 0 Interleukin 11 CENP-F_leu_zip PF10473.9 gi|15678568|ref|NP_275683.1| - 2.7 8.0 91.4 0.3 11.1 13.2 6.0 3 2 3 6 6 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MukB PF04310.12 gi|15678568|ref|NP_275683.1| - 2.8 7.7 4.9 1.7 8.4 0.0 2.8 3 0 0 3 3 2 0 MukB N-terminal Effector_1 PF04518.12 gi|15678568|ref|NP_275683.1| - 3.8 6.5 12.3 2.2 7.3 0.6 3.0 2 1 0 2 2 2 0 Effector from type III secretion system ATG16 PF08614.11 gi|15678568|ref|NP_275683.1| - 4.6 7.4 84.2 0.039 14.2 11.4 6.0 3 2 0 5 5 5 0 Autophagy protein 16 (ATG16) Fmp27_WPPW PF10359.9 gi|15678568|ref|NP_275683.1| - 5.1 5.8 62.1 0.079 11.8 10.9 4.8 1 1 3 4 4 4 0 RNA pol II promoter Fmp27 protein domain UPF0242 PF06785.11 gi|15678568|ref|NP_275683.1| - 5.4 7.1 75.7 0.15 12.2 15.3 5.1 2 2 2 4 4 3 0 Uncharacterised protein family (UPF0242) N-terminus Metallophos PF00149.28 gi|15678569|ref|NP_275684.1| - 2.2e-10 41.4 0.0 3.3e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15678569|ref|NP_275684.1| - 1e-07 32.3 0.0 1.9e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF87 PF01935.17 gi|15678570|ref|NP_275685.1| - 1.1e-30 107.5 0.0 1.4e-30 107.1 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|15678570|ref|NP_275685.1| - 2.8e-05 23.6 0.0 4.7e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family HAS-barrel PF09378.10 gi|15678570|ref|NP_275685.1| - 0.0096 16.0 0.0 0.019 15.1 0.0 1.5 1 0 0 1 1 1 1 HAS barrel domain TrwB_AAD_bind PF10412.9 gi|15678570|ref|NP_275685.1| - 0.19 10.6 0.0 0.29 10.0 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NurA PF09376.10 gi|15678571|ref|NP_275686.1| - 3.7e-13 49.7 0.0 6.2e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 NurA domain YbjQ_1 PF01906.17 gi|15678572|ref|NP_275687.1| - 6.2e-34 116.8 0.2 7.2e-34 116.5 0.2 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding AA_permease_2 PF13520.6 gi|15678574|ref|NP_275689.1| - 2.2e-54 184.9 38.9 2.8e-54 184.6 38.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15678574|ref|NP_275689.1| - 9.8e-45 153.0 37.2 1.3e-44 152.6 37.2 1.2 1 0 0 1 1 1 1 Amino acid permease Glyco_trans_2_3 PF13632.6 gi|15678575|ref|NP_275690.1| - 2.9e-25 89.3 6.4 3e-25 89.3 4.7 1.9 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|15678575|ref|NP_275690.1| - 1.7e-17 64.1 0.0 2.2e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|15678575|ref|NP_275690.1| - 2.4e-07 30.4 0.1 3.6e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 DUF1569 PF07606.11 gi|15678575|ref|NP_275690.1| - 0.074 13.1 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1569) YwiC PF14256.6 gi|15678575|ref|NP_275690.1| - 1.8 8.9 7.1 7.5 6.9 7.1 2.0 1 1 0 1 1 1 0 YwiC-like protein DUF2207 PF09972.9 gi|15678575|ref|NP_275690.1| - 3 6.5 5.5 5.2 5.7 5.5 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Response_reg PF00072.24 gi|15678576|ref|NP_275691.1| - 1.8e-31 108.6 0.0 4.2e-22 78.4 0.1 2.4 2 0 0 2 2 2 2 Response regulator receiver domain Glycos_transf_2 PF00535.26 gi|15678576|ref|NP_275691.1| - 2.9e-12 46.7 0.0 7.5e-12 45.4 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678576|ref|NP_275691.1| - 0.00032 20.6 0.0 0.00068 19.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|15678576|ref|NP_275691.1| - 0.0043 17.5 0.0 0.01 16.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|15678576|ref|NP_275691.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 YtxH PF12732.7 gi|15678576|ref|NP_275691.1| - 0.13 12.8 0.4 2.2 8.9 0.0 2.2 2 0 0 2 2 2 0 YtxH-like protein B9-C2 PF07162.11 gi|15678576|ref|NP_275691.1| - 0.17 12.1 0.0 1.4 9.1 0.0 2.0 2 0 0 2 2 2 0 Ciliary basal body-associated, B9 protein Response_reg PF00072.24 gi|15678577|ref|NP_275692.1| - 1e-11 45.0 0.1 1.2e-11 44.8 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain HHH_8 PF14716.6 gi|15678578|ref|NP_275693.1| - 3.6e-21 75.3 5.2 8.5e-20 70.9 0.4 4.0 4 0 0 4 4 4 1 Helix-hairpin-helix domain DNA_pol_B_thumb PF14791.6 gi|15678578|ref|NP_275693.1| - 9.3e-19 67.4 0.2 2.1e-18 66.2 0.2 1.7 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_5 PF14520.6 gi|15678578|ref|NP_275693.1| - 8e-13 48.8 0.5 3.1e-09 37.3 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain PHP PF02811.19 gi|15678578|ref|NP_275693.1| - 2.9e-09 37.4 0.0 7.2e-09 36.2 0.0 1.6 1 1 0 1 1 1 1 PHP domain DNA_pol_B_palm PF14792.6 gi|15678578|ref|NP_275693.1| - 4e-07 30.2 0.1 1.6e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase beta palm HHH PF00633.23 gi|15678578|ref|NP_275693.1| - 4.3e-05 23.2 0.1 0.11 12.4 0.0 3.0 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|15678578|ref|NP_275693.1| - 0.00019 21.2 0.0 0.00067 19.4 0.0 2.0 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda NTP_transf_2 PF01909.23 gi|15678578|ref|NP_275693.1| - 0.0019 18.5 0.2 0.0083 16.4 0.1 2.1 2 0 0 2 2 2 1 Nucleotidyltransferase domain Cdd1 PF11731.8 gi|15678578|ref|NP_275693.1| - 0.0098 16.1 0.1 4.4 7.6 0.0 2.5 1 1 1 2 2 2 2 Pathogenicity locus DUF763 PF05559.11 gi|15678578|ref|NP_275693.1| - 0.15 11.2 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF763) AAA_19 PF13245.6 gi|15678579|ref|NP_275694.1| - 6.7e-14 52.5 0.0 4.1e-13 49.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain UvrD-helicase PF00580.21 gi|15678579|ref|NP_275694.1| - 2.9e-13 50.0 0.1 8.3e-06 25.5 0.0 2.6 3 0 0 3 3 3 2 UvrD/REP helicase N-terminal domain UvrD_C_2 PF13538.6 gi|15678579|ref|NP_275694.1| - 2.9e-08 33.4 0.0 6.5e-08 32.3 0.0 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain ResIII PF04851.15 gi|15678579|ref|NP_275694.1| - 0.003 17.6 0.0 0.053 13.5 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 gi|15678579|ref|NP_275694.1| - 0.0038 17.0 0.0 0.0061 16.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|15678579|ref|NP_275694.1| - 0.0066 15.7 0.0 0.013 14.8 0.0 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|15678579|ref|NP_275694.1| - 0.012 16.0 0.1 0.046 14.1 0.1 2.0 1 1 0 1 1 1 0 AAA ATPase domain Viral_helicase1 PF01443.18 gi|15678579|ref|NP_275694.1| - 0.021 14.6 0.0 1.3 8.7 0.0 2.5 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 gi|15678579|ref|NP_275694.1| - 0.083 13.2 0.0 0.31 11.3 0.0 2.0 1 1 0 1 1 1 0 AAA domain UvrD_C PF13361.6 gi|15678579|ref|NP_275694.1| - 0.12 11.8 0.0 4.3 6.6 0.0 2.2 1 1 1 2 2 2 0 UvrD-like helicase C-terminal domain CbiA PF01656.23 gi|15678579|ref|NP_275694.1| - 0.21 11.7 0.1 0.49 10.5 0.1 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PcrB PF01884.17 gi|15678580|ref|NP_275695.1| - 7.3e-97 323.2 0.1 8.3e-97 323.1 0.1 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|15678580|ref|NP_275695.1| - 5.7e-06 26.0 0.1 1.1e-05 25.0 0.0 1.5 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|15678580|ref|NP_275695.1| - 0.0001 21.6 0.2 0.00019 20.8 0.2 1.4 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase B12-binding PF02310.19 gi|15678580|ref|NP_275695.1| - 0.00047 20.2 0.1 0.71 9.9 0.1 2.2 2 0 0 2 2 2 2 B12 binding domain Trp_syntA PF00290.20 gi|15678580|ref|NP_275695.1| - 0.00087 18.2 0.5 0.0057 15.5 0.3 2.0 2 0 0 2 2 2 1 Tryptophan synthase alpha chain FMN_dh PF01070.18 gi|15678580|ref|NP_275695.1| - 0.0067 15.5 0.9 0.016 14.2 0.4 1.8 2 0 0 2 2 2 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|15678580|ref|NP_275695.1| - 0.0084 15.4 0.4 0.36 10.1 0.5 2.4 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|15678580|ref|NP_275695.1| - 0.0085 15.4 0.0 0.59 9.4 0.0 2.3 2 0 0 2 2 2 1 Thiamine monophosphate synthase IMPDH PF00478.25 gi|15678580|ref|NP_275695.1| - 0.033 13.2 0.3 0.13 11.2 0.3 1.8 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|15678580|ref|NP_275695.1| - 0.037 13.2 1.1 0.38 9.9 0.1 2.3 2 1 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PEP_mutase PF13714.6 gi|15678580|ref|NP_275695.1| - 0.072 12.5 0.1 0.31 10.5 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase PrpR_N PF06506.11 gi|15678580|ref|NP_275695.1| - 0.092 12.3 1.0 1.2 8.6 0.1 3.1 2 1 1 3 3 3 0 Propionate catabolism activator zinc_ribbon_2 PF13240.6 gi|15678581|ref|NP_275696.1| - 3.8e-05 23.2 5.0 5.3e-05 22.8 5.0 1.2 1 0 0 1 1 1 1 zinc-ribbon domain Ribosomal_L40e PF01020.17 gi|15678581|ref|NP_275696.1| - 6.4e-05 22.8 4.5 7e-05 22.6 4.5 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.7 gi|15678581|ref|NP_275696.1| - 0.00017 21.5 0.9 0.00018 21.5 0.9 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|15678581|ref|NP_275696.1| - 0.0045 16.4 3.5 0.0063 15.9 3.5 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|15678581|ref|NP_275696.1| - 0.009 15.3 3.2 0.013 14.9 3.2 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DHHC PF01529.20 gi|15678581|ref|NP_275696.1| - 0.029 14.5 1.2 0.03 14.4 1.2 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF326 PF03860.16 gi|15678581|ref|NP_275696.1| - 3.7 7.7 8.2 3.9 7.6 0.9 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Ribo_biogen_C PF04034.13 gi|15678582|ref|NP_275697.1| - 6.4e-49 164.9 0.0 7.9e-49 164.6 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|15678582|ref|NP_275697.1| - 1.3e-05 24.9 0.2 2.2e-05 24.2 0.2 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI VWA_2 PF13519.6 gi|15678583|ref|NP_275698.1| - 1e-11 45.4 0.0 1.6e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|15678583|ref|NP_275698.1| - 6.3e-06 26.2 0.0 7.6e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|15678583|ref|NP_275698.1| - 0.012 15.0 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein Copine PF07002.16 gi|15678583|ref|NP_275698.1| - 0.11 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Copine AAA_lid_2 PF17863.1 gi|15678584|ref|NP_275699.1| - 1.2e-17 63.4 2.6 2.8e-17 62.3 2.6 1.7 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|15678584|ref|NP_275699.1| - 1.5e-13 50.6 0.8 9.7e-07 28.4 0.0 2.7 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|15678584|ref|NP_275699.1| - 5.7e-10 39.3 0.0 0.00011 22.2 0.0 2.9 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|15678584|ref|NP_275699.1| - 2.7e-05 23.4 0.4 0.0033 16.5 0.0 2.8 2 1 0 2 2 2 1 MCM P-loop domain AAA PF00004.29 gi|15678584|ref|NP_275699.1| - 0.00017 22.0 0.1 0.0015 19.0 0.0 2.5 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|15678584|ref|NP_275699.1| - 0.00077 19.3 0.1 0.31 10.9 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|15678584|ref|NP_275699.1| - 0.0011 18.7 0.0 1.8 8.3 0.0 2.6 3 0 0 3 3 3 2 Sigma-54 interaction domain AAA_16 PF13191.6 gi|15678584|ref|NP_275699.1| - 0.0011 19.4 0.8 0.0091 16.4 0.8 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15678584|ref|NP_275699.1| - 0.006 16.9 0.2 0.056 13.7 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|15678584|ref|NP_275699.1| - 0.012 15.4 0.4 0.25 11.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain ESX-1_EspG PF14011.6 gi|15678584|ref|NP_275699.1| - 0.03 13.9 2.4 1.2 8.7 0.0 2.2 2 0 0 2 2 2 0 EspG family MCM_lid PF17855.1 gi|15678584|ref|NP_275699.1| - 0.031 14.7 0.2 0.089 13.2 0.2 1.7 1 0 0 1 1 1 0 MCM AAA-lid domain CbiA PF01656.23 gi|15678584|ref|NP_275699.1| - 0.034 14.2 0.0 0.047 13.8 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_29 PF13555.6 gi|15678584|ref|NP_275699.1| - 0.035 13.8 0.1 0.1 12.4 0.1 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|15678584|ref|NP_275699.1| - 0.072 13.0 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 NACHT domain TIP49 PF06068.13 gi|15678584|ref|NP_275699.1| - 0.12 11.5 0.5 0.49 9.5 0.1 2.0 2 0 0 2 2 2 0 TIP49 P-loop domain TsaE PF02367.17 gi|15678584|ref|NP_275699.1| - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_11 PF13086.6 gi|15678584|ref|NP_275699.1| - 0.2 11.4 1.1 2.1 8.0 1.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|15678584|ref|NP_275699.1| - 0.27 11.8 0.1 0.27 11.8 0.1 2.3 3 1 0 3 3 2 0 AAA domain AAA_6 PF12774.7 gi|15678584|ref|NP_275699.1| - 0.27 10.1 0.0 0.47 9.4 0.0 1.3 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Paf1 PF03985.13 gi|15678584|ref|NP_275699.1| - 0.45 9.5 7.3 0.14 11.1 4.7 1.3 2 0 0 2 2 2 0 Paf1 HypA PF01155.19 gi|15678585|ref|NP_275700.1| - 0.00041 20.4 3.3 0.00042 20.3 3.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|15678585|ref|NP_275700.1| - 0.0053 16.8 3.6 0.012 15.8 3.6 1.6 1 1 0 1 1 1 1 Zinc ribbon domain DUF4802 PF16060.5 gi|15678585|ref|NP_275700.1| - 0.03 14.5 3.5 0.096 12.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4802) DUF35_N PF12172.8 gi|15678585|ref|NP_275700.1| - 0.03 14.2 4.3 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 gi|15678585|ref|NP_275700.1| - 0.38 10.6 8.4 0.78 9.7 1.4 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF116 PF01976.17 gi|15678587|ref|NP_275702.1| - 2.2e-46 157.2 0.1 2.6e-46 156.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 TatD_DNase PF01026.21 gi|15678588|ref|NP_275703.1| - 6e-23 81.5 0.0 1e-22 80.8 0.0 1.3 1 1 0 1 1 1 1 TatD related DNase VIT1 PF01988.19 gi|15678589|ref|NP_275704.1| - 1.7e-16 60.8 18.2 1.1e-13 51.6 1.7 2.1 1 1 1 2 2 2 2 VIT family DUF1361 PF07099.11 gi|15678589|ref|NP_275704.1| - 0.0069 16.4 2.5 0.011 15.8 1.9 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1361) DUF2721 PF11026.8 gi|15678589|ref|NP_275704.1| - 2.6 8.0 10.0 0.054 13.4 2.8 1.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2721) DUF4231 PF14015.6 gi|15678589|ref|NP_275704.1| - 3.6 8.1 4.7 7.7 7.1 0.5 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4231) HMG-CoA_red PF00368.18 gi|15678590|ref|NP_275705.1| - 2.9e-132 441.1 2.7 3.3e-132 441.0 2.7 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase CoA_binding PF02629.19 gi|15678591|ref|NP_275706.1| - 5.8e-28 97.4 0.1 1.5e-27 96.1 0.1 1.8 1 0 0 1 1 1 1 CoA binding domain Ligase_CoA PF00549.19 gi|15678591|ref|NP_275706.1| - 9.4e-19 67.7 0.2 1.4e-18 67.2 0.2 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|15678591|ref|NP_275706.1| - 5.8e-12 45.6 0.1 1e-11 44.8 0.1 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|15678591|ref|NP_275706.1| - 0.00085 19.8 0.0 0.0045 17.5 0.0 2.1 3 0 0 3 3 3 1 CoA binding domain GFO_IDH_MocA PF01408.22 gi|15678591|ref|NP_275706.1| - 0.032 15.0 0.0 0.11 13.3 0.0 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold DHquinase_I PF01487.15 gi|15678594|ref|NP_275709.1| - 1.3e-52 179.3 0.0 1.5e-52 179.2 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase Peptidase_S24 PF00717.23 gi|15678595|ref|NP_275710.1| - 1.1e-14 54.1 1.3 1.5e-14 53.7 0.4 1.7 2 0 0 2 2 2 1 Peptidase S24-like EF-hand_5 PF13202.6 gi|15678596|ref|NP_275711.1| - 6.9e-07 28.5 0.3 9.5e-07 28.1 0.3 1.2 1 0 0 1 1 1 1 EF hand Peptidase_M48 PF01435.18 gi|15678596|ref|NP_275711.1| - 0.0029 17.4 0.0 0.0029 17.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M48 EF-hand_1 PF00036.32 gi|15678596|ref|NP_275711.1| - 0.0098 15.4 0.1 0.016 14.7 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 gi|15678596|ref|NP_275711.1| - 0.075 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain Peptidase_M48 PF01435.18 gi|15678597|ref|NP_275712.1| - 2.5e-41 141.6 0.0 3.4e-41 141.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|15678597|ref|NP_275712.1| - 7.5e-06 25.3 0.1 1.5e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 BlaR1 peptidase M56 Trep_Strep PF09605.10 gi|15678597|ref|NP_275712.1| - 0.2 11.6 11.1 1.2 9.1 0.2 2.2 2 0 0 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) ABC2_membrane_3 PF12698.7 gi|15678597|ref|NP_275712.1| - 1.6 7.7 6.7 9.7 5.2 0.1 2.1 2 0 0 2 2 2 0 ABC-2 family transporter protein TcpE PF12648.7 gi|15678597|ref|NP_275712.1| - 4.8 7.8 7.8 0.54 10.8 1.5 2.2 2 0 0 2 2 2 0 TcpE family Big_5 PF13205.6 gi|15678598|ref|NP_275713.1| - 3.5e-12 47.0 0.1 1.5e-11 44.9 0.0 2.1 2 0 0 2 2 2 1 Bacterial Ig-like domain CopC PF04234.12 gi|15678598|ref|NP_275713.1| - 0.052 14.6 0.0 0.15 13.1 0.0 1.8 2 1 0 2 2 2 0 CopC domain CbiA PF01656.23 gi|15678599|ref|NP_275714.1| - 1.9e-15 57.0 0.0 2.4e-15 56.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|15678599|ref|NP_275714.1| - 4.1e-10 39.5 0.0 0.00012 21.6 0.0 2.1 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|15678599|ref|NP_275714.1| - 2.4e-09 37.0 1.1 0.00019 21.0 0.1 2.1 1 1 1 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|15678599|ref|NP_275714.1| - 3.5e-08 33.2 0.8 5.9e-06 25.9 0.2 2.4 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|15678599|ref|NP_275714.1| - 3.6e-07 30.3 0.0 6.3e-07 29.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain CLP1_P PF16575.5 gi|15678599|ref|NP_275714.1| - 5.4e-05 23.1 0.0 0.00027 20.8 0.0 1.9 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop SRP54 PF00448.22 gi|15678599|ref|NP_275714.1| - 8e-05 22.3 0.1 0.019 14.6 0.0 2.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain KTI12 PF08433.10 gi|15678599|ref|NP_275714.1| - 9.2e-05 22.0 0.1 0.00067 19.2 0.1 2.1 2 0 0 2 2 2 1 Chromatin associated protein KTI12 APS_kinase PF01583.20 gi|15678599|ref|NP_275714.1| - 0.00026 20.9 0.0 0.00044 20.2 0.0 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase ABC_tran PF00005.27 gi|15678599|ref|NP_275714.1| - 0.0004 20.9 0.0 0.00064 20.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter cobW PF02492.19 gi|15678599|ref|NP_275714.1| - 0.00044 19.9 0.3 0.05 13.2 0.1 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 gi|15678599|ref|NP_275714.1| - 0.00056 19.1 0.0 0.00091 18.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein ArsA_ATPase PF02374.15 gi|15678599|ref|NP_275714.1| - 0.00071 18.8 0.1 0.0011 18.2 0.1 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase MMR_HSR1 PF01926.23 gi|15678599|ref|NP_275714.1| - 0.00074 19.6 0.1 0.5 10.5 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|15678599|ref|NP_275714.1| - 0.0012 19.3 0.1 0.0015 18.9 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 gi|15678599|ref|NP_275714.1| - 0.0012 18.9 0.3 0.0025 18.0 0.3 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain MeaB PF03308.16 gi|15678599|ref|NP_275714.1| - 0.0025 16.9 0.6 0.021 13.8 0.1 2.0 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|15678599|ref|NP_275714.1| - 0.0026 17.1 0.0 0.0044 16.3 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin NTPase_1 PF03266.15 gi|15678599|ref|NP_275714.1| - 0.0042 17.0 0.1 0.011 15.6 0.1 1.7 1 0 0 1 1 1 1 NTPase GTP_EFTU PF00009.27 gi|15678599|ref|NP_275714.1| - 0.0054 16.3 0.2 0.26 10.8 0.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain KAP_NTPase PF07693.14 gi|15678599|ref|NP_275714.1| - 0.0068 15.7 0.0 0.014 14.7 0.0 1.3 1 1 0 1 1 1 1 KAP family P-loop domain NACHT PF05729.12 gi|15678599|ref|NP_275714.1| - 0.012 15.5 0.2 0.027 14.4 0.2 1.5 1 0 0 1 1 1 0 NACHT domain ATP_bind_1 PF03029.17 gi|15678599|ref|NP_275714.1| - 0.019 14.8 0.1 0.04 13.7 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|15678599|ref|NP_275714.1| - 0.019 14.7 0.1 0.061 13.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain NB-ARC PF00931.22 gi|15678599|ref|NP_275714.1| - 0.025 13.8 0.2 0.043 13.0 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 gi|15678599|ref|NP_275714.1| - 0.025 14.3 0.1 0.15 11.8 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|15678599|ref|NP_275714.1| - 0.03 14.0 0.2 0.068 12.9 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 gi|15678599|ref|NP_275714.1| - 0.039 12.9 0.1 0.11 11.3 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Thymidylate_kin PF02223.17 gi|15678599|ref|NP_275714.1| - 0.044 13.5 0.0 0.18 11.5 0.1 1.9 2 0 0 2 2 2 0 Thymidylate kinase AAA_26 PF13500.6 gi|15678599|ref|NP_275714.1| - 0.045 13.6 1.3 1 9.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|15678599|ref|NP_275714.1| - 0.045 14.0 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|15678599|ref|NP_275714.1| - 0.054 12.4 0.2 0.13 11.2 0.1 1.5 2 0 0 2 2 2 0 AAA-like domain NOG1 PF06858.14 gi|15678599|ref|NP_275714.1| - 0.056 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) PIF1 PF05970.14 gi|15678599|ref|NP_275714.1| - 0.06 12.5 0.0 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA_5 PF07728.14 gi|15678599|ref|NP_275714.1| - 0.061 13.3 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|15678599|ref|NP_275714.1| - 0.067 13.2 0.0 0.17 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15678599|ref|NP_275714.1| - 0.089 13.2 0.0 0.58 10.6 0.1 2.1 2 1 0 2 2 2 0 RNA helicase RNA12 PF10443.9 gi|15678599|ref|NP_275714.1| - 0.13 10.9 0.1 0.22 10.2 0.1 1.2 1 0 0 1 1 1 0 RNA12 protein DnaB_C PF03796.15 gi|15678599|ref|NP_275714.1| - 0.14 11.5 0.0 0.29 10.4 0.0 1.5 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain MipZ PF09140.11 gi|15678599|ref|NP_275714.1| - 0.14 11.4 0.7 0.25 10.6 0.2 1.6 2 0 0 2 2 2 0 ATPase MipZ DUF4504 PF14953.6 gi|15678599|ref|NP_275714.1| - 0.16 11.3 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) TrkA_N PF02254.18 gi|15678599|ref|NP_275714.1| - 0.16 12.2 0.5 6.7 7.0 0.0 2.5 2 1 0 2 2 2 0 TrkA-N domain SMC_N PF02463.19 gi|15678599|ref|NP_275714.1| - 0.19 11.1 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain dTDP_sugar_isom PF00908.17 gi|15678600|ref|NP_275715.1| - 8.6e-06 25.5 0.0 9.1e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Cupin_2 PF07883.11 gi|15678600|ref|NP_275715.1| - 0.17 11.7 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 Cupin domain dTDP_sugar_isom PF00908.17 gi|15678601|ref|NP_275716.1| - 0.012 15.4 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 dTDP-4-dehydrorhamnose 3,5-epimerase Flavin_Reduct PF01613.18 gi|15678602|ref|NP_275717.1| - 3.7e-17 62.8 0.0 4.7e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|15678602|ref|NP_275717.1| - 0.14 12.0 0.0 0.32 10.8 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF447) AP_endonuc_2 PF01261.24 gi|15678604|ref|NP_275719.1| - 0.094 12.1 0.2 0.4 10.1 0.2 1.9 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel GHMP_kinases_N PF00288.26 gi|15678605|ref|NP_275720.1| - 8.9e-08 32.3 0.9 2.2e-07 31.0 0.9 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15678605|ref|NP_275720.1| - 0.00013 22.3 0.1 0.00034 20.9 0.1 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal Methyltransf_24 PF13578.6 gi|15678606|ref|NP_275721.1| - 2.2e-07 31.8 0.0 3.3e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|15678606|ref|NP_275721.1| - 5.5e-07 28.9 0.1 8e-07 28.4 0.1 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|15678606|ref|NP_275721.1| - 5.9e-07 30.1 0.0 8.3e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|15678606|ref|NP_275721.1| - 8.2e-07 29.3 0.0 1e-06 29.0 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 gi|15678606|ref|NP_275721.1| - 1.5e-06 28.1 0.0 1.7e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CmcI PF04989.12 gi|15678606|ref|NP_275721.1| - 3.3e-05 23.7 0.0 3.8e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_11 PF08241.12 gi|15678606|ref|NP_275721.1| - 0.00039 21.0 0.0 0.00076 20.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_19 PF04672.12 gi|15678606|ref|NP_275721.1| - 0.00046 19.8 0.1 0.00064 19.3 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl methyltransferase Methyltransf_12 PF08242.12 gi|15678606|ref|NP_275721.1| - 0.0039 17.9 0.0 0.0059 17.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15678606|ref|NP_275721.1| - 0.0039 17.0 0.1 0.0067 16.2 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|15678606|ref|NP_275721.1| - 0.0041 16.7 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|15678606|ref|NP_275721.1| - 0.012 15.4 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|15678606|ref|NP_275721.1| - 0.018 14.1 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_3 PF01596.17 gi|15678606|ref|NP_275721.1| - 0.031 13.4 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase TIR_3 PF18567.1 gi|15678606|ref|NP_275721.1| - 0.033 14.2 0.0 0.05 13.6 0.0 1.4 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain TrkA_N PF02254.18 gi|15678606|ref|NP_275721.1| - 0.034 14.4 0.0 0.052 13.8 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Methyltransf_17 PF12692.7 gi|15678606|ref|NP_275721.1| - 0.038 14.0 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase adh_short PF00106.25 gi|15678606|ref|NP_275721.1| - 0.2 11.1 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase DeoC PF01791.9 gi|15678607|ref|NP_275722.1| - 4.1e-69 232.8 0.0 4.8e-69 232.6 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.6 gi|15678607|ref|NP_275722.1| - 0.018 14.5 0.1 3.5 7.0 0.0 2.7 2 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase PucR PF07905.11 gi|15678607|ref|NP_275722.1| - 0.026 14.8 0.0 4 7.7 0.0 2.6 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family Dus PF01207.17 gi|15678607|ref|NP_275722.1| - 0.054 12.6 0.2 1.4 8.0 0.0 2.5 2 1 0 2 2 2 0 Dihydrouridine synthase (Dus) DHQS PF01959.16 gi|15678608|ref|NP_275723.1| - 7.5e-149 495.4 0.3 8.5e-149 495.2 0.3 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Hint PF01079.20 gi|15678608|ref|NP_275723.1| - 0.014 14.9 0.0 0.18 11.3 0.0 2.1 2 0 0 2 2 2 0 Hint module LigT_PEase PF02834.16 gi|15678611|ref|NP_275726.1| - 2.3e-35 120.6 0.0 4.4e-17 62.0 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|15678611|ref|NP_275726.1| - 2.3e-18 66.6 0.0 2.9e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|15678611|ref|NP_275726.1| - 1.6e-07 31.4 0.0 6.5e-07 29.4 0.0 1.7 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain tRNA_NucTransf2 PF09249.11 gi|15678612|ref|NP_275727.1| - 1.1e-41 141.6 0.0 1.9e-41 140.8 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|15678612|ref|NP_275727.1| - 8.4e-19 67.7 0.0 2.2e-18 66.3 0.0 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|15678612|ref|NP_275727.1| - 0.11 12.6 0.0 0.57 10.3 0.0 2.0 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DNA_primase_S PF01896.19 gi|15678613|ref|NP_275728.1| - 8.7e-16 58.5 0.0 1.8e-15 57.4 0.0 1.6 1 1 0 1 1 1 1 DNA primase small subunit DNA_primase_lrg PF04104.14 gi|15678614|ref|NP_275729.1| - 2e-26 93.0 0.0 2.6e-25 89.4 0.0 2.3 1 1 1 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit tRNA-synt_1g PF09334.11 gi|15678615|ref|NP_275730.1| - 2.1e-170 566.7 0.0 2.7e-170 566.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|15678615|ref|NP_275730.1| - 1.3e-24 86.1 0.2 3.5e-24 84.7 0.2 1.8 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|15678615|ref|NP_275730.1| - 1.6e-18 66.3 0.6 1.3e-07 30.3 0.0 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|15678615|ref|NP_275730.1| - 1.2e-11 44.6 0.0 4.4e-05 23.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 gi|15678615|ref|NP_275730.1| - 1.1e-06 28.8 0.0 2.1e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|15678615|ref|NP_275730.1| - 0.00083 18.4 0.0 0.0067 15.4 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (K) zinc-ribbons_6 PF07191.12 gi|15678615|ref|NP_275730.1| - 0.025 14.5 4.2 0.052 13.5 4.2 1.5 1 0 0 1 1 1 0 zinc-ribbons DZR PF12773.7 gi|15678615|ref|NP_275730.1| - 0.033 14.2 7.9 1 9.5 5.3 2.3 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 gi|15678615|ref|NP_275730.1| - 0.056 13.5 4.2 1.2 9.2 0.2 2.6 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 gi|15678615|ref|NP_275730.1| - 0.11 12.4 5.5 3 7.8 0.7 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 gi|15678615|ref|NP_275730.1| - 0.16 12.1 10.2 0.34 11.1 2.9 2.6 2 0 0 2 2 2 0 Zinc ribbon domain DALR_1 PF05746.15 gi|15678615|ref|NP_275730.1| - 0.2 11.8 0.7 0.38 10.9 0.0 1.7 2 0 0 2 2 2 0 DALR anticodon binding domain DUF530 PF04409.12 gi|15678616|ref|NP_275731.1| - 1e-232 773.1 0.2 1.2e-232 773.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF530) TackOD1 PF18551.1 gi|15678616|ref|NP_275731.1| - 0.081 12.6 0.3 0.15 11.7 0.3 1.4 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 SEC-C PF02810.15 gi|15678616|ref|NP_275731.1| - 0.62 10.0 2.4 1.2 9.2 2.4 1.4 1 0 0 1 1 1 0 SEC-C motif HTH_7 PF02796.15 gi|15678617|ref|NP_275732.1| - 4.1e-14 52.4 5.1 3.1e-06 27.1 0.1 2.7 3 0 0 3 3 3 2 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|15678617|ref|NP_275732.1| - 6.5e-10 38.5 0.0 8.2e-05 22.3 0.0 2.9 3 0 0 3 3 3 2 Homeodomain-like domain HTH_32 PF13565.6 gi|15678617|ref|NP_275732.1| - 3.4e-06 27.6 0.7 0.059 14.0 0.0 2.9 1 1 2 3 3 3 2 Homeodomain-like domain HTH_24 PF13412.6 gi|15678617|ref|NP_275732.1| - 6.4e-06 25.6 1.5 2.6 7.7 0.1 4.4 4 0 0 4 4 4 2 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 gi|15678617|ref|NP_275732.1| - 2.5e-05 24.2 0.1 2.7 8.1 0.1 3.5 1 1 2 3 3 3 2 Winged helix-turn helix HTH_28 PF13518.6 gi|15678617|ref|NP_275732.1| - 0.00011 22.3 0.0 0.062 13.4 0.0 3.2 3 0 0 3 3 3 1 Helix-turn-helix domain TrmB PF01978.19 gi|15678617|ref|NP_275732.1| - 0.00012 21.9 0.1 0.31 11.0 0.0 2.8 2 1 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB GerE PF00196.19 gi|15678617|ref|NP_275732.1| - 0.00025 20.5 0.0 0.25 10.9 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|15678617|ref|NP_275732.1| - 0.0003 20.4 0.0 0.79 9.4 0.0 3.0 3 0 0 3 3 3 2 Sigma-70, region 4 HTH_38 PF13936.6 gi|15678617|ref|NP_275732.1| - 0.0037 17.0 0.0 2.1 8.2 0.1 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain DUF1699 PF08004.11 gi|15678617|ref|NP_275732.1| - 0.006 16.3 0.1 0.12 12.1 0.0 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF1699) MerR_1 PF13411.6 gi|15678617|ref|NP_275732.1| - 0.0077 16.3 4.5 0.023 14.8 0.1 3.1 3 1 1 4 4 4 1 MerR HTH family regulatory protein HTH_17 PF12728.7 gi|15678617|ref|NP_275732.1| - 0.0087 16.2 1.2 0.22 11.7 0.1 3.1 3 1 0 3 3 3 1 Helix-turn-helix domain HTH_Tnp_IS1 PF12759.7 gi|15678617|ref|NP_275732.1| - 0.032 13.8 0.1 0.072 12.7 0.1 1.6 2 0 0 2 2 2 0 InsA C-terminal domain HTH_40 PF14493.6 gi|15678617|ref|NP_275732.1| - 0.051 14.0 0.0 5.2 7.6 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain Trp_repressor PF01371.19 gi|15678617|ref|NP_275732.1| - 0.12 12.5 0.2 12 6.1 0.0 2.6 3 1 0 3 3 3 0 Trp repressor protein Glycos_transf_4 PF00953.21 gi|15678618|ref|NP_275733.1| - 1.7e-28 99.6 19.5 1.7e-28 99.6 19.5 2.7 2 1 0 2 2 2 1 Glycosyl transferase family 4 TPR_12 PF13424.6 gi|15678619|ref|NP_275734.1| - 5.8e-18 65.0 8.7 2e-09 37.6 0.4 3.3 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678619|ref|NP_275734.1| - 2.1e-09 36.8 4.8 0.25 11.6 0.5 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15678619|ref|NP_275734.1| - 1.2e-07 31.4 7.2 0.56 10.6 0.0 4.9 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15678619|ref|NP_275734.1| - 2.4e-07 30.3 1.5 0.0048 16.8 0.2 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15678619|ref|NP_275734.1| - 5.1e-06 26.9 7.1 0.12 13.2 0.5 4.6 3 2 2 5 5 4 2 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|15678619|ref|NP_275734.1| - 8.4e-06 25.8 1.7 0.12 12.4 0.0 3.8 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 5 TPR_1 PF00515.28 gi|15678619|ref|NP_275734.1| - 1.2e-05 24.9 1.5 1.1 9.2 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|15678619|ref|NP_275734.1| - 1.3e-05 24.7 0.0 0.047 13.1 0.0 2.7 2 1 1 3 3 3 2 MalT-like TPR region TPR_10 PF13374.6 gi|15678619|ref|NP_275734.1| - 9.3e-05 22.2 2.3 1.2 9.1 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|15678619|ref|NP_275734.1| - 0.0003 20.5 6.5 0.52 10.0 0.1 3.6 2 2 1 3 3 3 2 26S proteasome subunit RPN7 TPR_21 PF09976.9 gi|15678619|ref|NP_275734.1| - 0.0041 16.8 2.7 0.016 14.9 0.3 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat-like domain ANAPC3 PF12895.7 gi|15678619|ref|NP_275734.1| - 0.0063 16.7 0.8 1.8 8.8 0.0 3.0 3 1 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 gi|15678619|ref|NP_275734.1| - 0.014 16.0 1.3 18 6.1 0.2 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 gi|15678619|ref|NP_275734.1| - 0.052 13.9 1.0 3.8 7.9 0.1 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678619|ref|NP_275734.1| - 0.076 13.7 7.8 2.4 9.0 0.2 4.9 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF982 PF06169.12 gi|15678619|ref|NP_275734.1| - 0.12 12.5 0.1 2 8.5 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF982) AAA_assoc_2 PF16193.5 gi|15678619|ref|NP_275734.1| - 0.16 12.4 1.9 0.48 10.8 0.1 2.6 3 0 0 3 3 3 0 AAA C-terminal domain TPR_19 PF14559.6 gi|15678619|ref|NP_275734.1| - 0.4 11.2 6.9 1 9.9 0.2 3.7 3 2 1 4 4 4 0 Tetratricopeptide repeat PPR PF01535.20 gi|15678619|ref|NP_275734.1| - 2.7 8.4 5.0 74 3.9 0.1 4.0 4 0 0 4 4 3 0 PPR repeat ATPase PF06745.13 gi|15678620|ref|NP_275735.1| - 4.3e-14 52.4 0.0 1.6e-13 50.5 0.0 1.9 2 0 0 2 2 2 1 KaiC DnaB_C PF03796.15 gi|15678620|ref|NP_275735.1| - 0.0008 18.8 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|15678620|ref|NP_275735.1| - 0.0022 18.4 0.0 0.0034 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|15678620|ref|NP_275735.1| - 0.0028 17.4 0.0 0.0062 16.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|15678620|ref|NP_275735.1| - 0.005 16.4 0.0 0.0072 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|15678620|ref|NP_275735.1| - 0.0075 16.5 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|15678620|ref|NP_275735.1| - 0.034 14.2 0.0 0.059 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Terminase_6 PF03237.15 gi|15678620|ref|NP_275735.1| - 0.05 13.3 0.0 0.063 12.9 0.0 1.2 1 0 0 1 1 1 0 Terminase-like family IstB_IS21 PF01695.17 gi|15678620|ref|NP_275735.1| - 0.054 13.2 0.0 0.082 12.6 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 gi|15678620|ref|NP_275735.1| - 0.11 12.9 0.0 0.25 11.8 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|15678620|ref|NP_275735.1| - 0.22 11.4 0.0 0.34 10.8 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ATPase PF06745.13 gi|15678621|ref|NP_275736.1| - 6.7e-31 107.4 0.0 2.1e-30 105.8 0.0 1.7 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15678621|ref|NP_275736.1| - 3e-05 23.7 0.0 7.8e-05 22.3 0.0 1.7 1 1 1 2 2 2 1 AAA domain RecA PF00154.21 gi|15678621|ref|NP_275736.1| - 0.0029 17.1 0.0 0.017 14.6 0.0 1.9 2 0 0 2 2 2 1 recA bacterial DNA recombination protein MEDS PF14417.6 gi|15678621|ref|NP_275736.1| - 0.0055 16.6 0.0 0.018 14.9 0.0 1.8 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain IstB_IS21 PF01695.17 gi|15678621|ref|NP_275736.1| - 0.012 15.3 0.0 0.036 13.8 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|15678621|ref|NP_275736.1| - 0.018 14.8 0.0 0.026 14.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|15678621|ref|NP_275736.1| - 0.11 12.5 0.0 0.21 11.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|15678622|ref|NP_275737.1| - 3.7e-15 55.9 0.0 4e-14 52.5 0.0 2.1 1 1 1 2 2 2 1 KaiC Arf PF00025.21 gi|15678622|ref|NP_275737.1| - 1.9e-10 40.5 0.0 3.1e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 gi|15678622|ref|NP_275737.1| - 2.6e-09 36.9 0.0 3.7e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 gi|15678622|ref|NP_275737.1| - 1.1e-07 32.1 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 gi|15678622|ref|NP_275737.1| - 8.6e-07 29.0 0.0 2.5e-06 27.6 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|15678622|ref|NP_275737.1| - 5.5e-06 26.1 0.0 7.4e-05 22.4 0.0 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain ATP_bind_1 PF03029.17 gi|15678622|ref|NP_275737.1| - 1.2e-05 25.2 0.0 0.001 18.9 0.0 2.4 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein SRPRB PF09439.10 gi|15678622|ref|NP_275737.1| - 0.00014 21.3 0.0 0.0003 20.3 0.0 1.5 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 gi|15678622|ref|NP_275737.1| - 0.0071 16.4 0.0 0.015 15.4 0.0 1.6 1 1 0 1 1 1 1 Dynamin family AAA_29 PF13555.6 gi|15678622|ref|NP_275737.1| - 0.12 12.1 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Robl_LC7 PF03259.17 gi|15678623|ref|NP_275738.1| - 8.3e-23 80.0 0.1 1e-22 79.7 0.1 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain Desmo_N PF06771.11 gi|15678623|ref|NP_275738.1| - 0.12 12.8 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Viral Desmoplakin N-terminus MCR_C PF04609.12 gi|15678626|ref|NP_275741.1| - 2.9e-07 29.8 0.0 5e-07 29.1 0.0 1.3 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF131 PF01998.17 gi|15678628|ref|NP_275743.1| - 5e-21 74.1 3.7 5e-21 74.1 3.7 1.8 1 1 1 2 2 2 1 Protein of unknown function DUF131 DUF1218 PF06749.12 gi|15678628|ref|NP_275743.1| - 0.053 14.0 0.4 0.075 13.6 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) DUF5362 PF17319.2 gi|15678628|ref|NP_275743.1| - 0.07 13.0 7.4 0.25 11.2 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5362) CRPA PF05745.11 gi|15678628|ref|NP_275743.1| - 1.2 9.1 5.6 2.1 8.4 0.4 2.1 2 0 0 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) DUF166 PF02593.14 gi|15678629|ref|NP_275744.1| - 1.1e-66 224.5 0.0 1.8e-66 223.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function Fer4_10 PF13237.6 gi|15678629|ref|NP_275744.1| - 0.00017 21.6 11.3 0.00094 19.2 11.5 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678629|ref|NP_275744.1| - 0.00024 21.0 13.1 0.0076 16.3 2.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678629|ref|NP_275744.1| - 0.00052 20.6 10.7 0.016 15.8 9.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678629|ref|NP_275744.1| - 0.0006 19.8 13.5 0.042 13.9 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|15678629|ref|NP_275744.1| - 0.036 13.9 3.6 0.036 13.9 3.6 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15678629|ref|NP_275744.1| - 0.06 13.5 8.0 0.13 12.5 8.0 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678629|ref|NP_275744.1| - 0.071 13.2 6.1 1.9 8.7 1.0 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678629|ref|NP_275744.1| - 0.22 12.0 10.3 3.4 8.2 10.3 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678629|ref|NP_275744.1| - 2 9.1 11.5 46 4.7 11.5 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678629|ref|NP_275744.1| - 2.9 8.9 12.8 10 7.1 5.1 2.3 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain TP_methylase PF00590.20 gi|15678630|ref|NP_275745.1| - 2e-52 178.2 1.0 2.4e-52 178.0 1.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NikR_C PF08753.11 gi|15678631|ref|NP_275746.1| - 4.7e-17 61.9 0.5 8.4e-17 61.1 0.2 1.6 2 0 0 2 2 2 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|15678631|ref|NP_275746.1| - 1.6e-09 37.4 0.7 1.6e-09 37.4 0.7 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|15678631|ref|NP_275746.1| - 0.028 14.6 0.1 0.034 14.3 0.1 1.3 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family ZnuA PF01297.17 gi|15678632|ref|NP_275747.1| - 2.5e-59 200.8 0.0 2.9e-59 200.6 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic B12-binding PF02310.19 gi|15678632|ref|NP_275747.1| - 0.13 12.3 0.1 3.5 7.7 0.0 2.4 2 1 0 2 2 2 0 B12 binding domain ABC_tran PF00005.27 gi|15678633|ref|NP_275748.1| - 5.9e-31 107.8 0.0 7.8e-31 107.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15678633|ref|NP_275748.1| - 4e-12 46.6 0.7 1.7e-05 24.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15678633|ref|NP_275748.1| - 4.1e-05 23.1 0.0 0.052 13.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|15678633|ref|NP_275748.1| - 0.0011 19.4 0.0 0.0016 18.9 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|15678633|ref|NP_275748.1| - 0.017 15.6 0.2 0.028 14.9 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|15678633|ref|NP_275748.1| - 0.02 15.2 0.3 0.048 13.9 0.3 1.9 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|15678633|ref|NP_275748.1| - 0.025 14.8 0.1 0.58 10.4 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 gi|15678633|ref|NP_275748.1| - 0.032 14.0 0.1 0.12 12.0 0.1 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.6 gi|15678633|ref|NP_275748.1| - 0.068 12.7 0.2 0.48 10.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|15678633|ref|NP_275748.1| - 0.087 12.5 0.3 6.5 6.5 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|15678633|ref|NP_275748.1| - 0.093 12.4 0.1 0.21 11.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|15678633|ref|NP_275748.1| - 0.12 12.2 0.1 0.24 11.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|15678633|ref|NP_275748.1| - 0.16 12.4 0.2 0.32 11.4 0.2 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|15678633|ref|NP_275748.1| - 0.22 11.4 0.2 0.37 10.7 0.2 1.3 1 0 0 1 1 1 0 NACHT domain DUF3584 PF12128.8 gi|15678633|ref|NP_275748.1| - 0.44 8.0 0.3 0.57 7.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC-3 PF00950.17 gi|15678634|ref|NP_275749.1| - 4.7e-89 298.3 28.7 5.3e-89 298.1 28.7 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|15678634|ref|NP_275749.1| - 1.5e-06 27.4 30.0 3.2e-06 26.4 30.0 1.6 1 1 0 1 1 1 1 FecCD transport family DUF2642 PF10842.8 gi|15678635|ref|NP_275750.1| - 0.0039 17.0 0.1 0.0066 16.3 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2642) DUF150_C PF17384.2 gi|15678635|ref|NP_275750.1| - 0.013 15.6 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain Rib_5-P_isom_A PF06026.14 gi|15678636|ref|NP_275751.1| - 1e-65 220.5 0.1 1.3e-65 220.2 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|15678636|ref|NP_275751.1| - 2.8e-07 30.6 0.1 0.00011 22.2 0.1 2.1 1 1 0 1 1 1 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|15678636|ref|NP_275751.1| - 0.05 12.7 0.0 0.087 11.9 0.0 1.4 1 1 0 1 1 1 0 Putative sugar-binding domain UPF0179 PF03684.13 gi|15678637|ref|NP_275752.1| - 1.2e-47 161.4 0.6 1.3e-47 161.2 0.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DDE_Tnp_1_6 PF13751.6 gi|15678637|ref|NP_275752.1| - 0.074 13.3 4.1 0.65 10.2 1.0 2.7 2 1 0 3 3 3 0 Transposase DDE domain Fe-ADH_2 PF13685.6 gi|15678638|ref|NP_275753.1| - 5.4e-71 239.2 2.5 7.3e-71 238.8 2.5 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|15678638|ref|NP_275753.1| - 1.2e-22 80.2 5.5 2.8e-21 75.7 5.5 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|15678638|ref|NP_275753.1| - 6.1e-09 35.4 1.4 2.9e-08 33.2 1.4 2.0 1 1 0 1 1 1 1 3-dehydroquinate synthase tRNA-synt_2b PF00587.25 gi|15678639|ref|NP_275754.1| - 7e-29 101.1 0.0 1.2e-28 100.3 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|15678639|ref|NP_275754.1| - 1.4e-23 82.8 0.3 2.9e-22 78.6 0.1 2.5 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|15678639|ref|NP_275754.1| - 9.1e-09 35.4 0.3 3e-08 33.7 0.3 1.9 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal TIR_2 PF13676.6 gi|15678639|ref|NP_275754.1| - 0.0022 18.6 0.3 0.011 16.3 0.0 2.3 3 0 0 3 3 3 1 TIR domain DUF2977 PF11192.8 gi|15678639|ref|NP_275754.1| - 0.037 14.2 0.0 0.13 12.4 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2977) DUF2703 PF10865.8 gi|15678639|ref|NP_275754.1| - 0.042 14.0 0.0 0.49 10.6 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF2703) CofC PF01983.16 gi|15678641|ref|NP_275756.1| - 1.5e-104 347.9 0.0 1.7e-104 347.7 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|15678641|ref|NP_275756.1| - 3e-11 43.9 0.0 4.6e-11 43.3 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|15678641|ref|NP_275756.1| - 7.8e-06 25.7 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) Phos_pyr_kin PF08543.12 gi|15678642|ref|NP_275757.1| - 1.3e-77 260.5 0.0 1.6e-77 260.2 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|15678642|ref|NP_275757.1| - 3.1e-09 36.6 0.0 3.8e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|15678642|ref|NP_275757.1| - 0.003 17.1 0.7 0.027 13.9 0.7 2.2 1 1 0 1 1 1 1 Carbohydrate kinase Adenylsucc_synt PF00709.21 gi|15678643|ref|NP_275758.1| - 2.3e-88 297.0 0.7 1.5e-44 152.6 0.1 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase MAF_flag10 PF01973.18 gi|15678643|ref|NP_275758.1| - 0.042 13.6 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF115 Mg_chelatase PF01078.21 gi|15678644|ref|NP_275759.1| - 2.3e-11 43.5 0.0 1.6e-09 37.4 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|15678644|ref|NP_275759.1| - 5.2e-05 23.3 0.0 0.012 15.6 0.0 2.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|15678644|ref|NP_275759.1| - 0.004 16.8 0.1 0.017 14.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|15678644|ref|NP_275759.1| - 0.0052 17.0 0.0 0.017 15.4 0.0 2.0 2 1 0 2 2 1 1 AAA domain AAA PF00004.29 gi|15678644|ref|NP_275759.1| - 0.0054 17.1 0.2 0.04 14.4 0.2 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|15678644|ref|NP_275759.1| - 0.012 16.0 0.5 0.065 13.6 0.1 2.4 2 1 0 2 2 2 0 AAA ATPase domain RNA_helicase PF00910.22 gi|15678644|ref|NP_275759.1| - 0.027 14.9 0.0 0.76 10.2 0.0 2.4 2 0 0 2 2 2 0 RNA helicase DUF2075 PF09848.9 gi|15678644|ref|NP_275759.1| - 0.044 13.0 0.1 2.5 7.2 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|15678644|ref|NP_275759.1| - 0.045 13.3 0.1 0.16 11.5 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 gi|15678644|ref|NP_275759.1| - 0.066 13.0 0.1 0.29 10.9 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|15678644|ref|NP_275759.1| - 0.081 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|15678644|ref|NP_275759.1| - 0.12 12.9 0.0 0.5 10.9 0.0 2.3 1 1 0 1 1 1 0 AAA domain PIF1 PF05970.14 gi|15678644|ref|NP_275759.1| - 0.14 11.3 0.0 0.34 10.0 0.0 1.6 1 0 0 1 1 1 0 PIF1-like helicase IstB_IS21 PF01695.17 gi|15678644|ref|NP_275759.1| - 0.15 11.8 0.2 1.7 8.3 0.1 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein DNA_binding_1 PF01035.20 gi|15678646|ref|NP_275761.1| - 2.4e-27 94.9 0.0 3.1e-27 94.5 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain AIMP2_LysRS_bd PF16780.5 gi|15678646|ref|NP_275761.1| - 0.4 10.5 1.7 2.3 8.0 1.7 2.1 1 1 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain HisKA_2 PF07568.12 gi|15678647|ref|NP_275762.1| - 4.6e-27 93.9 8.9 1.2e-26 92.6 8.9 1.8 1 0 0 1 1 1 1 Histidine kinase PAS PF00989.25 gi|15678647|ref|NP_275762.1| - 1.8e-18 66.6 0.1 4.5e-11 42.8 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|15678647|ref|NP_275762.1| - 8.9e-15 54.9 0.0 1.1e-06 28.8 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|15678647|ref|NP_275762.1| - 1.1e-12 48.1 0.1 1e-06 28.9 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.7 gi|15678647|ref|NP_275762.1| - 3.7e-09 36.4 0.1 3.9e-06 26.8 0.1 2.7 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.12 gi|15678647|ref|NP_275762.1| - 5.9e-09 36.1 0.1 2.8e-05 24.3 0.0 2.7 2 0 0 2 2 2 2 PAS fold HATPase_c PF02518.26 gi|15678647|ref|NP_275762.1| - 1.2e-06 29.0 0.5 3.3e-06 27.6 0.1 2.0 2 1 0 2 2 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|15678647|ref|NP_275762.1| - 1.4e-06 28.9 2.8 3.2e-06 27.8 2.8 1.6 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|15678647|ref|NP_275762.1| - 1e-05 25.5 0.0 2e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|15678647|ref|NP_275762.1| - 0.0015 18.4 0.0 0.0027 17.5 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|15678647|ref|NP_275762.1| - 0.11 12.7 0.0 0.32 11.1 0.0 1.8 1 0 0 1 1 1 0 PAS domain MgtE PF01769.16 gi|15678648|ref|NP_275763.1| - 2.8e-18 66.5 8.4 2.8e-18 66.5 8.4 1.7 2 0 0 2 2 2 1 Divalent cation transporter CBS PF00571.28 gi|15678648|ref|NP_275763.1| - 9.1e-15 54.9 1.4 5.6e-07 29.9 0.1 2.5 2 0 0 2 2 2 2 CBS domain Glyco_transf_34 PF05637.12 gi|15678648|ref|NP_275763.1| - 0.042 13.6 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family Rab5ip PF07019.12 gi|15678648|ref|NP_275763.1| - 0.2 12.3 5.7 0.15 12.6 2.7 2.1 2 0 0 2 2 2 0 Rab5-interacting protein (Rab5ip) HXXEE PF13787.6 gi|15678648|ref|NP_275763.1| - 1.3 9.8 4.6 2.5 8.9 4.4 1.6 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif Spc7 PF08317.11 gi|15678649|ref|NP_275764.1| - 0.0017 17.3 9.7 0.0071 15.3 5.9 2.0 1 1 1 2 2 2 2 Spc7 kinetochore protein DUF3584 PF12128.8 gi|15678649|ref|NP_275764.1| - 0.0022 15.6 3.9 0.0023 15.5 3.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) PKcGMP_CC PF16808.5 gi|15678649|ref|NP_275764.1| - 0.0049 16.7 8.8 0.0049 16.7 8.8 2.8 2 1 1 3 3 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF745 PF05335.13 gi|15678649|ref|NP_275764.1| - 0.0082 15.9 1.6 0.01 15.6 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF745) Laminin_II PF06009.12 gi|15678649|ref|NP_275764.1| - 0.01 15.9 4.4 0.014 15.4 4.4 1.2 1 0 0 1 1 1 0 Laminin Domain II Taxilin PF09728.9 gi|15678649|ref|NP_275764.1| - 0.012 14.8 9.3 0.027 13.6 9.4 1.4 1 1 0 1 1 1 0 Myosin-like coiled-coil protein CAGE1 PF15066.6 gi|15678649|ref|NP_275764.1| - 0.014 14.1 6.8 0.017 13.8 6.8 1.0 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family KASH_CCD PF14662.6 gi|15678649|ref|NP_275764.1| - 0.014 15.2 1.6 0.014 15.2 1.6 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH SlyX PF04102.12 gi|15678649|ref|NP_275764.1| - 0.016 15.8 2.2 0.016 15.8 2.2 2.3 1 1 1 2 2 2 0 SlyX HALZ PF02183.18 gi|15678649|ref|NP_275764.1| - 0.019 15.2 2.6 4 7.7 0.0 2.7 2 0 0 2 2 2 0 Homeobox associated leucine zipper Phage_HK97_TLTM PF06120.11 gi|15678649|ref|NP_275764.1| - 0.019 14.2 2.2 0.038 13.2 0.3 1.9 1 1 1 2 2 2 0 Tail length tape measure protein JIP_LZII PF16471.5 gi|15678649|ref|NP_275764.1| - 0.02 15.1 13.4 0.073 13.3 5.2 2.9 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II HR1 PF02185.16 gi|15678649|ref|NP_275764.1| - 0.022 14.9 0.3 0.022 14.9 0.3 2.8 2 1 0 2 2 2 0 Hr1 repeat TACC_C PF05010.14 gi|15678649|ref|NP_275764.1| - 0.023 14.5 4.9 0.033 14.0 4.9 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Jnk-SapK_ap_N PF09744.9 gi|15678649|ref|NP_275764.1| - 0.023 14.9 11.1 0.13 12.5 1.8 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Chibby PF14645.6 gi|15678649|ref|NP_275764.1| - 0.043 14.2 5.7 0.34 11.3 4.7 2.3 1 1 0 1 1 1 0 Chibby family DUF4201 PF13870.6 gi|15678649|ref|NP_275764.1| - 0.046 13.4 10.8 0.21 11.3 10.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Exonuc_VII_L PF02601.15 gi|15678649|ref|NP_275764.1| - 0.06 12.9 1.7 0.067 12.8 1.7 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5082 PF16888.5 gi|15678649|ref|NP_275764.1| - 0.063 13.6 8.0 1.3 9.3 1.3 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) CENP-F_leu_zip PF10473.9 gi|15678649|ref|NP_275764.1| - 0.069 13.2 12.5 0.098 12.7 12.5 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 gi|15678649|ref|NP_275764.1| - 0.077 13.4 12.1 0.36 11.2 0.4 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Pox_A_type_inc PF04508.12 gi|15678649|ref|NP_275764.1| - 0.088 12.7 15.8 0.27 11.2 1.6 5.0 3 2 1 4 4 4 0 Viral A-type inclusion protein repeat MA-Mit PF09245.10 gi|15678649|ref|NP_275764.1| - 0.09 12.3 1.9 0.11 11.9 1.9 1.1 1 0 0 1 1 1 0 Mycoplasma arthritidis-derived mitogen Med4 PF10018.9 gi|15678649|ref|NP_275764.1| - 0.097 12.3 6.0 0.17 11.6 5.6 1.6 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF4200 PF13863.6 gi|15678649|ref|NP_275764.1| - 0.11 12.9 10.0 0.13 12.7 2.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) GAS PF13851.6 gi|15678649|ref|NP_275764.1| - 0.14 11.5 9.8 0.18 11.1 9.8 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding SHE3 PF17078.5 gi|15678649|ref|NP_275764.1| - 0.17 11.6 8.2 0.55 9.9 8.2 1.7 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Fmp27_WPPW PF10359.9 gi|15678649|ref|NP_275764.1| - 0.18 10.6 6.7 1.6 7.5 6.7 1.9 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain TMPIT PF07851.13 gi|15678649|ref|NP_275764.1| - 0.19 10.9 1.5 0.24 10.6 1.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 gi|15678649|ref|NP_275764.1| - 0.23 10.5 6.5 1.4 7.9 4.0 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMF_TATA_bd PF12325.8 gi|15678649|ref|NP_275764.1| - 0.29 11.3 15.9 0.097 12.9 10.8 1.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF812 PF05667.11 gi|15678649|ref|NP_275764.1| - 0.33 9.8 7.3 0.42 9.4 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Wtap PF17098.5 gi|15678649|ref|NP_275764.1| - 0.33 10.9 6.0 0.33 10.9 1.0 2.1 2 0 0 2 2 2 0 WTAP/Mum2p family YabA PF06156.13 gi|15678649|ref|NP_275764.1| - 0.39 11.4 7.9 5.4 7.7 7.9 2.1 1 1 0 1 1 1 0 Initiation control protein YabA Cluap1 PF10234.9 gi|15678649|ref|NP_275764.1| - 0.46 9.8 7.0 1.3 8.4 7.0 1.6 1 1 0 1 1 1 0 Clusterin-associated protein-1 ABC_tran_CTD PF16326.5 gi|15678649|ref|NP_275764.1| - 0.56 10.5 12.3 0.15 12.3 5.4 2.3 1 1 1 2 2 2 0 ABC transporter C-terminal domain BLOC1_2 PF10046.9 gi|15678649|ref|NP_275764.1| - 0.68 10.3 6.1 16 5.9 0.6 2.5 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sec2p PF06428.11 gi|15678649|ref|NP_275764.1| - 0.79 9.7 10.1 2.8 8.0 3.3 2.5 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p APG6_N PF17675.1 gi|15678649|ref|NP_275764.1| - 0.85 10.1 11.3 1.1 9.7 11.3 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF2205 PF10224.9 gi|15678649|ref|NP_275764.1| - 0.87 9.6 8.2 0.13 12.3 2.7 2.1 1 1 1 2 2 2 0 Short coiled-coil protein FapA PF03961.13 gi|15678649|ref|NP_275764.1| - 1.1 7.8 4.4 1.3 7.5 4.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A SWIRM-assoc_1 PF16495.5 gi|15678649|ref|NP_275764.1| - 1.1 9.3 12.1 0.088 12.8 5.1 2.2 1 1 0 2 2 2 0 SWIRM-associated region 1 DUF1664 PF07889.12 gi|15678649|ref|NP_275764.1| - 1.2 9.2 4.9 1.5 8.9 1.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF3375 PF11855.8 gi|15678649|ref|NP_275764.1| - 1.4 7.8 17.0 3.8 6.3 17.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3375) Swi5 PF07061.11 gi|15678649|ref|NP_275764.1| - 1.4 9.0 7.4 2.5e+02 1.9 7.4 2.5 1 1 0 1 1 1 0 Swi5 COG2 PF06148.11 gi|15678649|ref|NP_275764.1| - 1.5 8.9 6.5 0.91 9.6 2.0 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 TMF_DNA_bd PF12329.8 gi|15678649|ref|NP_275764.1| - 1.7 8.7 13.0 0.39 10.8 1.3 2.6 1 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 gi|15678649|ref|NP_275764.1| - 2.2 8.4 12.3 29 4.7 12.4 2.0 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Med9 PF07544.13 gi|15678649|ref|NP_275764.1| - 2.5 8.3 9.8 3.3 7.9 1.4 2.7 1 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Ax_dynein_light PF10211.9 gi|15678649|ref|NP_275764.1| - 2.7 7.9 10.7 4 7.3 3.1 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain ZapB PF06005.12 gi|15678649|ref|NP_275764.1| - 4.2 7.9 14.3 2.5e+02 2.2 14.3 2.4 1 1 0 1 1 1 0 Cell division protein ZapB CorA PF01544.18 gi|15678649|ref|NP_275764.1| - 4.9 6.4 7.7 6.4 6.0 7.7 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein ATG16 PF08614.11 gi|15678649|ref|NP_275764.1| - 9.6 6.4 13.4 40 4.3 13.4 1.8 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Rhodanese PF00581.20 gi|15678650|ref|NP_275765.1| - 9.4e-32 109.7 0.0 1.1e-16 61.2 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain CPBP PF02517.16 gi|15678651|ref|NP_275766.1| - 3.7e-16 59.3 19.7 4.4e-15 55.8 19.7 2.6 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease DUF2953 PF11167.8 gi|15678653|ref|NP_275768.1| - 1.3e-08 34.8 0.0 2.1e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) Spore_YtfJ PF09579.10 gi|15678654|ref|NP_275769.1| - 1e-14 54.5 3.9 1.5e-14 53.9 3.9 1.2 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) CARDB PF07705.11 gi|15678655|ref|NP_275770.1| - 0.0013 18.9 0.0 0.0028 17.9 0.0 1.5 1 1 0 1 1 1 1 CARDB NPCBM_assoc PF10633.9 gi|15678655|ref|NP_275770.1| - 0.0018 18.5 0.0 0.75 10.1 0.0 2.4 2 0 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase TRAP_beta PF05753.14 gi|15678655|ref|NP_275770.1| - 0.008 15.6 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 Translocon-associated protein beta (TRAPB) GyrI-like PF06445.15 gi|15678656|ref|NP_275771.1| - 1.9e-31 109.5 1.4 2.2e-31 109.3 1.4 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 gi|15678656|ref|NP_275771.1| - 2.5e-10 40.7 0.5 3.1e-10 40.4 0.5 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein FANCI_S1 PF14675.6 gi|15678656|ref|NP_275771.1| - 0.0023 17.5 0.0 0.0035 16.9 0.0 1.3 1 0 0 1 1 1 1 FANCI solenoid 1 SDF PF00375.18 gi|15678657|ref|NP_275772.1| - 0.084 11.9 2.6 0.083 11.9 2.6 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family EamA PF00892.20 gi|15678658|ref|NP_275773.1| - 6.1e-09 36.2 6.2 6.4e-09 36.1 6.2 1.0 1 0 0 1 1 1 1 EamA-like transporter family Epimerase PF01370.21 gi|15678659|ref|NP_275774.1| - 1.1e-58 198.5 0.0 1.3e-58 198.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15678659|ref|NP_275774.1| - 2.4e-56 191.6 0.0 3.6e-56 191.0 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|15678659|ref|NP_275774.1| - 6e-14 51.8 0.0 8.7e-14 51.3 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|15678659|ref|NP_275774.1| - 9.5e-14 51.1 0.0 3e-13 49.4 0.0 1.7 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|15678659|ref|NP_275774.1| - 4e-11 42.6 0.0 4.9e-09 35.7 0.0 3.1 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|15678659|ref|NP_275774.1| - 5.5e-06 26.4 0.0 7.9e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|15678659|ref|NP_275774.1| - 1.9e-05 24.4 0.0 3e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 gi|15678659|ref|NP_275774.1| - 0.0048 16.1 0.0 0.016 14.4 0.0 1.9 1 1 0 1 1 1 1 Male sterility protein KR PF08659.10 gi|15678659|ref|NP_275774.1| - 0.0079 16.1 0.1 0.049 13.5 0.1 2.1 2 1 0 2 2 2 1 KR domain Virul_Fac PF10139.9 gi|15678660|ref|NP_275775.1| - 0.00012 20.5 0.0 0.00016 20.1 0.0 1.1 1 0 0 1 1 1 1 Putative bacterial virulence factor AAA PF00004.29 gi|15678660|ref|NP_275775.1| - 0.0011 19.4 0.0 0.0042 17.5 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) PfkB PF00294.24 gi|15678660|ref|NP_275775.1| - 0.002 17.5 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase AAA_16 PF13191.6 gi|15678660|ref|NP_275775.1| - 0.0069 16.8 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain Torsin PF06309.11 gi|15678660|ref|NP_275775.1| - 0.0077 16.3 0.0 0.016 15.3 0.0 1.4 1 0 0 1 1 1 1 Torsin Phos_pyr_kin PF08543.12 gi|15678660|ref|NP_275775.1| - 0.0095 15.3 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase KAP_NTPase PF07693.14 gi|15678660|ref|NP_275775.1| - 0.022 14.0 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain AAA_7 PF12775.7 gi|15678660|ref|NP_275775.1| - 0.048 13.2 0.0 0.088 12.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|15678660|ref|NP_275775.1| - 0.057 13.7 0.0 0.26 11.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|15678660|ref|NP_275775.1| - 0.064 12.5 0.0 0.23 10.7 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_25 PF13481.6 gi|15678660|ref|NP_275775.1| - 0.091 12.3 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|15678660|ref|NP_275775.1| - 0.11 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain CPBP PF02517.16 gi|15678661|ref|NP_275776.1| - 1.2e-12 48.0 1.4 1.2e-12 48.0 1.4 2.5 2 1 0 2 2 1 1 CPBP intramembrane metalloprotease TPR_1 PF00515.28 gi|15678661|ref|NP_275776.1| - 2.4e-08 33.4 7.9 0.00035 20.3 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15678661|ref|NP_275776.1| - 1.9e-07 31.2 7.0 0.00034 20.9 1.0 3.4 1 1 1 3 3 3 3 Tetratricopeptide repeat SNAP PF14938.6 gi|15678661|ref|NP_275776.1| - 3e-07 30.2 2.0 0.0035 16.8 0.0 2.1 1 1 1 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_8 PF13181.6 gi|15678661|ref|NP_275776.1| - 3e-07 30.1 9.8 0.0062 16.6 0.0 4.3 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15678661|ref|NP_275776.1| - 8.8e-07 28.5 1.4 0.48 10.6 0.1 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15678661|ref|NP_275776.1| - 1e-06 28.3 8.8 0.031 14.4 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15678661|ref|NP_275776.1| - 7.5e-05 22.3 1.0 0.06 13.0 0.0 3.0 3 1 0 3 3 3 2 TPR repeat TPR_14 PF13428.6 gi|15678661|ref|NP_275776.1| - 0.00019 22.0 0.5 0.43 11.5 0.0 3.7 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15678661|ref|NP_275776.1| - 0.00057 20.3 8.2 0.078 13.7 0.2 4.0 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15678661|ref|NP_275776.1| - 0.00094 19.6 1.0 0.64 10.6 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|15678661|ref|NP_275776.1| - 0.0012 18.9 1.1 0.27 11.3 0.2 2.3 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 gi|15678661|ref|NP_275776.1| - 0.0042 17.7 2.2 1.6 9.5 0.3 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|15678661|ref|NP_275776.1| - 0.0098 15.3 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 1 MalT-like TPR region DUF2225 PF09986.9 gi|15678661|ref|NP_275776.1| - 0.017 14.9 0.6 0.032 14.0 0.6 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) RPN7 PF10602.9 gi|15678661|ref|NP_275776.1| - 0.067 12.9 1.7 1 9.0 0.1 2.3 2 0 0 2 2 2 0 26S proteasome subunit RPN7 ANAPC5 PF12862.7 gi|15678661|ref|NP_275776.1| - 0.11 12.5 0.3 3.3 7.8 0.0 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 TPR_10 PF13374.6 gi|15678661|ref|NP_275776.1| - 0.18 11.7 0.9 18 5.3 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat NTP_transferase PF00483.23 gi|15678662|ref|NP_275777.1| - 9.8e-27 94.1 0.0 1.3e-26 93.8 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15678662|ref|NP_275777.1| - 4.5e-11 43.4 0.0 7.5e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|15678662|ref|NP_275777.1| - 0.017 14.9 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Smr PF01713.21 gi|15678662|ref|NP_275777.1| - 0.037 14.4 0.0 0.094 13.1 0.0 1.7 1 0 0 1 1 1 0 Smr domain FimA PF16970.5 gi|15678662|ref|NP_275777.1| - 0.047 13.9 0.0 0.091 12.9 0.0 1.4 1 0 0 1 1 1 0 Type-1 fimbrial protein, A Rib PF08428.10 gi|15678663|ref|NP_275778.1| - 0.0021 18.0 0.6 0.0044 17.0 0.6 1.5 1 0 0 1 1 1 1 Rib/alpha-like repeat Big_2 PF02368.18 gi|15678663|ref|NP_275778.1| - 0.007 16.2 0.6 1.4 8.9 0.1 2.7 2 0 0 2 2 2 2 Bacterial Ig-like domain (group 2) DUF3098 PF11297.8 gi|15678663|ref|NP_275778.1| - 0.08 12.6 0.8 0.14 11.8 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) DUF4134 PF13572.6 gi|15678664|ref|NP_275779.1| - 0.0014 18.9 1.3 0.0018 18.5 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4134) DUF167 PF02594.16 gi|15678665|ref|NP_275780.1| - 1.6e-21 76.2 0.0 2e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Stealth_CR3 PF17102.5 gi|15678665|ref|NP_275780.1| - 0.091 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 DUF371 PF04027.13 gi|15678666|ref|NP_275781.1| - 4.4e-50 169.1 0.1 5e-50 168.9 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) Churchill PF06573.11 gi|15678666|ref|NP_275781.1| - 0.14 12.5 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 Churchill protein DUF2892 PF11127.8 gi|15678667|ref|NP_275782.1| - 0.54 10.3 7.4 0.42 10.7 1.7 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2892) DUF4383 PF14325.6 gi|15678667|ref|NP_275782.1| - 1.9 8.8 6.8 2.5 8.4 2.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4383) Tetraspanin PF00335.20 gi|15678667|ref|NP_275782.1| - 5.5 6.6 5.7 1.9 8.2 3.2 1.5 1 1 0 1 1 1 0 Tetraspanin family DUF123 PF01986.16 gi|15678668|ref|NP_275783.1| - 1.9e-25 89.2 0.2 2.6e-25 88.7 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 GIY-YIG PF01541.24 gi|15678668|ref|NP_275783.1| - 0.026 14.8 0.1 0.063 13.6 0.1 1.7 1 1 0 1 1 1 0 GIY-YIG catalytic domain Fer4_NifH PF00142.18 gi|15678670|ref|NP_275785.1| - 3e-100 335.1 0.1 3.4e-100 335.0 0.1 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|15678670|ref|NP_275785.1| - 8.4e-11 42.0 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15678670|ref|NP_275785.1| - 1e-07 32.1 0.0 2.1e-06 27.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|15678670|ref|NP_275785.1| - 4.7e-07 29.5 0.0 4.3e-06 26.4 0.0 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|15678670|ref|NP_275785.1| - 8.1e-06 25.2 0.0 4.1e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|15678670|ref|NP_275785.1| - 2e-05 24.4 0.0 2.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15678670|ref|NP_275785.1| - 0.0017 18.8 0.0 0.0037 17.7 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain MeaB PF03308.16 gi|15678670|ref|NP_275785.1| - 0.0022 17.1 0.2 0.0029 16.6 0.2 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|15678670|ref|NP_275785.1| - 0.0076 15.9 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15678670|ref|NP_275785.1| - 0.026 15.0 0.0 0.052 14.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 gi|15678670|ref|NP_275785.1| - 0.034 13.3 0.1 0.057 12.6 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain ATP_bind_1 PF03029.17 gi|15678670|ref|NP_275785.1| - 0.04 13.7 0.1 0.52 10.0 0.0 2.3 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 gi|15678670|ref|NP_275785.1| - 0.051 13.8 0.0 0.12 12.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 gi|15678670|ref|NP_275785.1| - 0.063 12.9 0.0 0.072 12.7 0.0 1.2 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.22 gi|15678670|ref|NP_275785.1| - 0.065 12.8 0.0 0.16 11.5 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 gi|15678670|ref|NP_275785.1| - 0.079 13.4 0.0 0.19 12.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase TPP_enzyme_N PF02776.18 gi|15678670|ref|NP_275785.1| - 0.17 11.5 0.0 13 5.4 0.0 2.2 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF87 PF01935.17 gi|15678670|ref|NP_275785.1| - 0.2 11.7 0.1 0.46 10.5 0.0 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain CBS PF00571.28 gi|15678671|ref|NP_275786.1| - 1.1e-38 131.4 6.2 6.1e-20 71.4 0.3 2.2 2 0 0 2 2 2 2 CBS domain PRC PF05239.16 gi|15678671|ref|NP_275786.1| - 3.5e-05 23.8 0.5 0.27 11.4 0.1 2.4 2 0 0 2 2 2 2 PRC-barrel domain DUF3659 PF12396.8 gi|15678671|ref|NP_275786.1| - 0.00097 19.0 1.2 0.031 14.2 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3659) sCache_3_2 PF17203.4 gi|15678671|ref|NP_275786.1| - 0.016 15.4 0.1 2.1 8.5 0.0 2.3 2 0 0 2 2 2 0 Single cache domain 3 Trypsin_2 PF13365.6 gi|15678671|ref|NP_275786.1| - 0.037 14.9 0.1 0.12 13.2 0.0 1.9 2 0 0 2 2 2 0 Trypsin-like peptidase domain Peptidase_S32 PF05579.13 gi|15678671|ref|NP_275786.1| - 0.11 11.7 0.0 0.35 10.0 0.0 1.8 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 Peptidase_S46 PF10459.9 gi|15678671|ref|NP_275786.1| - 0.3 9.7 0.0 0.52 8.9 0.0 1.3 1 0 0 1 1 1 0 Peptidase S46 DUF2283 PF10049.9 gi|15678671|ref|NP_275786.1| - 0.87 9.9 3.1 16 5.8 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2283) Peptidase_U32 PF01136.19 gi|15678672|ref|NP_275787.1| - 1.1e-86 289.8 0.0 2.2e-86 288.8 0.0 1.5 2 0 0 2 2 2 1 Peptidase family U32 PucR PF07905.11 gi|15678672|ref|NP_275787.1| - 0.019 15.2 0.2 0.33 11.2 0.0 2.6 3 0 0 3 3 3 0 Purine catabolism regulatory protein-like family GTP_EFTU_D2 PF03144.25 gi|15678672|ref|NP_275787.1| - 0.035 14.5 0.4 0.076 13.4 0.4 1.5 1 0 0 1 1 1 0 Elongation factor Tu domain 2 FAD_binding_3 PF01494.19 gi|15678672|ref|NP_275787.1| - 0.058 12.6 0.0 0.072 12.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain DrsE PF02635.15 gi|15678672|ref|NP_275787.1| - 0.13 12.7 0.0 1.5 9.2 0.0 2.3 2 0 0 2 2 2 0 DsrE/DsrF-like family GATase_7 PF13537.6 gi|15678673|ref|NP_275788.1| - 2.3e-24 85.7 0.0 6.1e-24 84.3 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|15678673|ref|NP_275788.1| - 4.4e-24 85.2 0.0 8e-24 84.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|15678673|ref|NP_275788.1| - 1.6e-13 50.2 0.0 9.8e-12 44.3 0.0 2.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|15678673|ref|NP_275788.1| - 2.5e-08 33.6 0.1 7.4e-08 32.1 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosyl transferase domain GATase_2 PF00310.21 gi|15678673|ref|NP_275788.1| - 0.11 11.2 0.0 1.9 7.1 0.0 2.3 2 1 1 3 3 3 0 Glutamine amidotransferases class-II Toprim PF01751.22 gi|15678674|ref|NP_275789.1| - 7.7e-07 29.3 0.2 3.7e-06 27.1 0.2 2.1 2 0 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 gi|15678674|ref|NP_275789.1| - 0.0002 21.7 0.0 0.00042 20.7 0.0 1.6 1 0 0 1 1 1 1 Toprim-like Rootletin PF15035.6 gi|15678674|ref|NP_275789.1| - 0.00021 21.4 3.3 0.00027 21.0 3.3 1.2 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion Mod_r PF07200.13 gi|15678674|ref|NP_275789.1| - 0.0003 20.9 3.1 0.0005 20.2 3.1 1.3 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein GAS PF13851.6 gi|15678674|ref|NP_275789.1| - 0.001 18.5 2.0 0.0023 17.3 2.0 1.6 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 gi|15678674|ref|NP_275789.1| - 0.0013 17.7 3.5 0.002 17.1 3.5 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein YabA PF06156.13 gi|15678674|ref|NP_275789.1| - 0.0023 18.5 4.4 0.068 13.8 0.7 2.3 1 1 1 2 2 2 1 Initiation control protein YabA DUF1664 PF07889.12 gi|15678674|ref|NP_275789.1| - 0.0054 16.8 0.2 0.015 15.3 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Csm1_N PF18504.1 gi|15678674|ref|NP_275789.1| - 0.0067 16.7 2.8 0.11 12.9 3.0 2.3 1 1 1 2 2 2 1 Csm1 N-terminal domain Toprim_4 PF13662.6 gi|15678674|ref|NP_275789.1| - 0.0092 16.4 0.6 0.084 13.4 0.3 2.7 2 2 0 2 2 2 1 Toprim domain ATG16 PF08614.11 gi|15678674|ref|NP_275789.1| - 0.0092 16.2 9.4 0.014 15.7 9.4 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) ZapB PF06005.12 gi|15678674|ref|NP_275789.1| - 0.011 16.2 9.6 0.015 15.8 3.5 2.4 1 1 1 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 gi|15678674|ref|NP_275789.1| - 0.015 15.1 3.7 0.39 10.5 0.6 2.3 1 1 1 2 2 2 0 Septum formation initiator Fez1 PF06818.15 gi|15678674|ref|NP_275789.1| - 0.015 15.8 1.8 0.023 15.1 1.8 1.2 1 0 0 1 1 1 0 Fez1 DUF4763 PF15960.5 gi|15678674|ref|NP_275789.1| - 0.025 13.9 0.7 0.12 11.7 0.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) bZIP_1 PF00170.21 gi|15678674|ref|NP_275789.1| - 0.039 14.0 7.7 0.81 9.8 0.8 2.4 1 1 1 2 2 2 0 bZIP transcription factor SHE3 PF17078.5 gi|15678674|ref|NP_275789.1| - 0.04 13.6 3.9 0.059 13.1 3.9 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 EzrA PF06160.12 gi|15678674|ref|NP_275789.1| - 0.041 12.1 2.9 0.082 11.1 2.6 1.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA ADIP PF11559.8 gi|15678674|ref|NP_275789.1| - 0.045 13.9 3.5 0.17 12.0 3.5 1.8 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 gi|15678674|ref|NP_275789.1| - 0.05 13.6 8.1 0.083 12.9 8.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3450 PF11932.8 gi|15678674|ref|NP_275789.1| - 0.053 12.8 0.7 0.095 12.0 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Tropomyosin_1 PF12718.7 gi|15678674|ref|NP_275789.1| - 0.06 13.5 8.2 0.37 10.9 7.7 2.1 1 1 0 1 1 1 0 Tropomyosin like DUF4201 PF13870.6 gi|15678674|ref|NP_275789.1| - 0.062 13.0 3.9 0.45 10.2 3.9 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) APG6_N PF17675.1 gi|15678674|ref|NP_275789.1| - 0.069 13.7 6.8 0.12 12.9 6.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region KASH_CCD PF14662.6 gi|15678674|ref|NP_275789.1| - 0.069 13.0 5.3 0.15 11.9 5.1 1.5 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Toprim_3 PF13362.6 gi|15678674|ref|NP_275789.1| - 0.075 13.4 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Toprim domain BLOC1_2 PF10046.9 gi|15678674|ref|NP_275789.1| - 0.088 13.1 1.5 0.26 11.6 1.4 1.8 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Atg14 PF10186.9 gi|15678674|ref|NP_275789.1| - 0.091 11.8 0.5 0.12 11.4 0.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Golgin_A5 PF09787.9 gi|15678674|ref|NP_275789.1| - 0.095 12.1 3.2 0.13 11.7 3.2 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 CENP-H PF05837.12 gi|15678674|ref|NP_275789.1| - 0.11 12.9 2.1 0.21 12.0 2.1 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Seryl_tRNA_N PF02403.22 gi|15678674|ref|NP_275789.1| - 0.13 12.5 4.6 0.063 13.5 2.2 1.7 2 0 0 2 2 1 0 Seryl-tRNA synthetase N-terminal domain TPR_MLP1_2 PF07926.12 gi|15678674|ref|NP_275789.1| - 0.13 12.3 5.2 0.77 9.8 5.3 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein T3SSipB PF16535.5 gi|15678674|ref|NP_275789.1| - 0.14 12.6 0.0 0.27 11.7 0.0 1.3 1 0 0 1 1 1 0 Type III cell invasion protein SipB Cep57_CLD PF14073.6 gi|15678674|ref|NP_275789.1| - 0.16 12.0 5.8 0.24 11.4 5.8 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 DHR10 PF18595.1 gi|15678674|ref|NP_275789.1| - 0.19 11.8 7.0 0.21 11.6 5.1 1.8 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain JIP_LZII PF16471.5 gi|15678674|ref|NP_275789.1| - 0.19 11.9 7.7 1.3 9.2 0.9 2.8 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II Cnn_1N PF07989.11 gi|15678674|ref|NP_275789.1| - 0.22 11.7 4.0 0.54 10.4 3.6 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Jnk-SapK_ap_N PF09744.9 gi|15678674|ref|NP_275789.1| - 0.24 11.6 9.8 0.34 11.1 8.3 1.9 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 FapA PF03961.13 gi|15678674|ref|NP_275789.1| - 0.25 9.9 3.4 0.34 9.4 3.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A BRE1 PF08647.11 gi|15678674|ref|NP_275789.1| - 0.27 11.4 3.5 0.84 9.7 3.5 1.7 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase HALZ PF02183.18 gi|15678674|ref|NP_275789.1| - 0.33 11.2 5.4 6.7 7.0 0.1 2.7 2 1 0 2 2 2 0 Homeobox associated leucine zipper TMF_DNA_bd PF12329.8 gi|15678674|ref|NP_275789.1| - 0.37 10.8 6.5 1.2 9.2 6.4 1.9 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 gi|15678674|ref|NP_275789.1| - 0.45 10.5 6.1 0.64 10.0 0.7 2.5 1 1 1 2 2 2 0 Prefoldin subunit TMF_TATA_bd PF12325.8 gi|15678674|ref|NP_275789.1| - 0.87 9.8 8.0 45 4.3 8.0 2.7 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding TSC22 PF01166.18 gi|15678674|ref|NP_275789.1| - 1.1 9.6 10.3 2.5 8.5 0.6 2.9 2 1 1 3 3 2 0 TSC-22/dip/bun family SpoOE-like PF09388.10 gi|15678674|ref|NP_275789.1| - 3.3 7.7 9.4 3.9 7.5 0.8 2.8 3 0 0 3 3 2 0 Spo0E like sporulation regulatory protein Spc24 PF08286.11 gi|15678674|ref|NP_275789.1| - 5.5 7.3 6.7 8.7 6.6 2.5 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Ribosomal_L37e PF01907.19 gi|15678675|ref|NP_275790.1| - 2.9e-26 91.4 9.7 3.2e-26 91.2 9.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e Ephrin_rec_like PF07699.13 gi|15678675|ref|NP_275790.1| - 0.023 14.4 0.3 0.032 14.0 0.3 1.3 1 0 0 1 1 1 0 Putative ephrin-receptor like zf-ribbon_3 PF13248.6 gi|15678675|ref|NP_275790.1| - 0.024 14.0 1.1 0.041 13.3 1.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|15678675|ref|NP_275790.1| - 0.032 14.2 1.4 0.042 13.9 1.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|15678675|ref|NP_275790.1| - 0.039 14.0 0.6 0.044 13.8 0.6 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-piccolo PF05715.13 gi|15678675|ref|NP_275790.1| - 0.053 13.7 1.5 0.1 12.8 1.5 1.7 1 1 0 1 1 1 0 Piccolo Zn-finger Ribosomal_L32p PF01783.23 gi|15678675|ref|NP_275790.1| - 1.6 9.1 10.1 1.9 8.8 8.4 1.9 1 1 1 2 2 2 0 Ribosomal L32p protein family Rubredoxin_2 PF18073.1 gi|15678675|ref|NP_275790.1| - 9.6 6.0 9.0 6.7 6.5 0.2 2.4 3 0 0 3 3 3 0 Rubredoxin metal binding domain LSM PF01423.22 gi|15678676|ref|NP_275791.1| - 1.9e-24 85.1 0.1 2.3e-24 84.9 0.1 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|15678676|ref|NP_275791.1| - 0.0007 19.7 0.0 0.0009 19.3 0.0 1.3 1 0 0 1 1 1 1 Ataxin 2 SM domain PUA PF01472.20 gi|15678677|ref|NP_275792.1| - 1.5e-22 79.3 1.1 3e-22 78.4 0.5 1.8 2 0 0 2 2 2 1 PUA domain DUF1947 PF09183.10 gi|15678677|ref|NP_275792.1| - 1.3e-10 41.4 0.1 2e-10 40.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) UPF0113 PF03657.13 gi|15678677|ref|NP_275792.1| - 1.1e-05 25.6 0.0 2.2e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|15678677|ref|NP_275792.1| - 0.0094 16.6 0.1 0.024 15.3 0.1 1.7 1 1 0 1 1 1 1 Pre-PUA-like domain PDZ PF00595.24 gi|15678677|ref|NP_275792.1| - 0.056 13.8 0.6 5.1 7.5 0.1 2.4 2 0 0 2 2 2 0 PDZ domain Creatininase PF02633.14 gi|15678678|ref|NP_275793.1| - 4.1e-12 46.1 0.0 7.5e-12 45.2 0.0 1.5 1 1 0 1 1 1 1 Creatinine amidohydrolase Ribonuc_red_lgC PF02867.15 gi|15678679|ref|NP_275794.1| - 5.4e-144 480.6 0.0 2.7e-142 475.0 0.0 2.2 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|15678679|ref|NP_275794.1| - 1.7e-26 92.0 0.0 3e-26 91.2 0.0 1.4 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Intein_splicing PF14890.6 gi|15678679|ref|NP_275794.1| - 1.1e-10 41.5 0.0 2e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Intein splicing domain ELFV_dehydrog PF00208.21 gi|15678679|ref|NP_275794.1| - 0.16 11.6 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PMT_2 PF13231.6 gi|15678680|ref|NP_275795.1| - 0.00055 20.2 13.0 0.00055 20.2 13.0 3.8 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF423 PF04241.15 gi|15678680|ref|NP_275795.1| - 0.1 12.8 0.2 0.1 12.8 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF423) Regulator_TrmB PF11495.8 gi|15678681|ref|NP_275796.1| - 0.00023 20.4 1.8 0.00093 18.4 0.3 2.3 2 1 1 3 3 3 1 Archaeal transcriptional regulator TrmB 30K_MP_core PF17644.1 gi|15678681|ref|NP_275796.1| - 0.074 12.9 1.2 0.29 11.0 0.1 2.4 2 1 1 3 3 3 0 Core domain of 30K viral movement proteins DUF4330 PF14221.6 gi|15678681|ref|NP_275796.1| - 0.1 12.8 2.0 0.15 12.2 0.8 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF4330) O_anti_polymase PF01901.16 gi|15678682|ref|NP_275797.1| - 3.5e-102 342.1 35.2 5.4e-102 341.5 35.2 1.3 1 0 0 1 1 1 1 Putative O-antigen polymerase DEAD PF00270.29 gi|15678683|ref|NP_275798.1| - 3.5e-25 88.8 0.0 5.9e-25 88.0 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15678683|ref|NP_275798.1| - 1.2e-14 54.5 0.0 2.9e-14 53.3 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15678683|ref|NP_275798.1| - 8.9e-11 42.1 0.0 1.4e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AMP-binding PF00501.28 gi|15678684|ref|NP_275799.1| - 1.2e-117 393.1 0.0 1.5e-117 392.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15678684|ref|NP_275799.1| - 1.8e-19 70.5 0.1 3.8e-19 69.4 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT PF03061.22 gi|15678685|ref|NP_275800.1| - 8.8e-09 35.6 0.0 1.4e-08 35.0 0.0 1.3 1 1 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|15678685|ref|NP_275800.1| - 2.5e-05 24.8 0.0 2.9e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|15678685|ref|NP_275800.1| - 0.0017 17.7 0.0 0.0049 16.2 0.0 1.8 1 1 0 1 1 1 1 Acyl-ACP thioesterase Cupin_2 PF07883.11 gi|15678686|ref|NP_275801.1| - 8.7e-17 60.6 1.4 1.3e-16 60.1 0.4 1.8 2 0 0 2 2 2 1 Cupin domain HTH_3 PF01381.22 gi|15678686|ref|NP_275801.1| - 6.3e-12 45.4 0.2 9.1e-12 44.8 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|15678686|ref|NP_275801.1| - 2.2e-09 37.2 0.2 4.5e-09 36.2 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|15678686|ref|NP_275801.1| - 9.9e-08 32.2 0.0 1.5e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 gi|15678686|ref|NP_275801.1| - 7e-06 26.0 0.2 1.1e-05 25.3 0.2 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_26 PF13443.6 gi|15678686|ref|NP_275801.1| - 1.3e-05 25.5 0.1 2e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Cupin_3 PF05899.12 gi|15678686|ref|NP_275801.1| - 0.00041 20.0 0.1 0.00085 19.0 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 gi|15678686|ref|NP_275801.1| - 0.00054 19.8 0.1 0.0009 19.1 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.18 gi|15678686|ref|NP_275801.1| - 0.046 13.6 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase HTH_24 PF13412.6 gi|15678686|ref|NP_275801.1| - 0.051 13.1 0.1 0.11 12.1 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Cupin_7 PF12973.7 gi|15678686|ref|NP_275801.1| - 0.13 12.2 1.5 0.72 9.8 0.1 2.2 1 1 1 2 2 2 0 ChrR Cupin-like domain Ammonium_transp PF00909.21 gi|15678688|ref|NP_275803.1| - 1.6e-134 448.6 36.1 1.8e-134 448.4 36.1 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|15678689|ref|NP_275804.1| - 4.9e-39 133.0 2.3 5.6e-39 132.9 2.3 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Nit_Regul_Hom PF10126.9 gi|15678689|ref|NP_275804.1| - 0.075 13.1 0.0 2.1 8.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII HisG_C PF08029.11 gi|15678689|ref|NP_275804.1| - 0.12 12.5 0.1 0.45 10.7 0.1 1.8 1 1 0 1 1 1 0 HisG, C-terminal domain Ammonium_transp PF00909.21 gi|15678690|ref|NP_275805.1| - 1.4e-136 455.4 40.1 1.6e-136 455.2 40.1 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|15678691|ref|NP_275806.1| - 1.3e-42 144.5 2.9 1.5e-42 144.3 2.9 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II FAD_binding_4 PF01565.23 gi|15678691|ref|NP_275806.1| - 0.016 15.0 0.1 0.021 14.5 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain PrmA PF06325.13 gi|15678691|ref|NP_275806.1| - 0.07 12.5 0.0 0.085 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ATP19 PF11022.8 gi|15678692|ref|NP_275807.1| - 0.052 13.9 0.1 0.076 13.4 0.1 1.4 1 0 0 1 1 1 0 ATP synthase subunit K SOR_SNZ PF01680.17 gi|15678693|ref|NP_275808.1| - 3.6e-108 360.1 8.6 4.7e-108 359.7 8.6 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|15678693|ref|NP_275808.1| - 3.1e-07 30.0 6.9 8.8e-06 25.2 0.1 2.4 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|15678693|ref|NP_275808.1| - 0.00087 18.8 2.6 0.0077 15.7 0.1 2.2 2 0 0 2 2 2 1 Nitronate monooxygenase Dus PF01207.17 gi|15678693|ref|NP_275808.1| - 0.0012 18.0 0.5 0.82 8.7 0.0 2.5 2 1 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|15678693|ref|NP_275808.1| - 0.0024 17.4 0.3 0.11 11.9 0.0 2.7 2 1 0 2 2 2 1 Histidine biosynthesis protein TetR_C_27 PF17935.1 gi|15678693|ref|NP_275808.1| - 0.0028 17.7 0.0 0.006 16.6 0.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain NanE PF04131.14 gi|15678693|ref|NP_275808.1| - 0.0082 15.3 1.1 0.077 12.2 0.0 2.4 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 gi|15678693|ref|NP_275808.1| - 0.028 13.6 0.1 0.28 10.3 0.0 2.3 2 1 0 2 2 2 0 Indole-3-glycerol phosphate synthase MttA_Hcf106 PF02416.16 gi|15678693|ref|NP_275808.1| - 0.26 10.6 1.6 4.6 6.7 0.0 2.7 3 0 0 3 3 3 0 mttA/Hcf106 family CbtA PF09490.10 gi|15678694|ref|NP_275809.1| - 0.021 14.6 1.2 0.026 14.3 1.2 1.0 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) PfkB PF00294.24 gi|15678695|ref|NP_275810.1| - 0.01 15.1 0.0 0.015 14.6 0.0 1.3 1 1 0 1 1 1 0 pfkB family carbohydrate kinase His_biosynth PF00977.21 gi|15678696|ref|NP_275811.1| - 3.1e-40 138.1 0.0 3.7e-40 137.8 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein TetR_C_6 PF13977.6 gi|15678696|ref|NP_275811.1| - 0.0048 17.1 0.2 0.26 11.5 0.0 2.3 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal QRPTase_C PF01729.19 gi|15678696|ref|NP_275811.1| - 0.027 14.3 0.0 0.11 12.3 0.0 1.9 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain PRAI PF00697.22 gi|15678696|ref|NP_275811.1| - 0.078 12.7 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DUF2149 PF09919.9 gi|15678697|ref|NP_275812.1| - 3.9e-24 84.7 0.8 4.7e-24 84.4 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) MotA_ExbB PF01618.16 gi|15678698|ref|NP_275813.1| - 1.9e-10 40.6 0.2 3e-10 39.9 0.2 1.4 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF2162 PF09930.9 gi|15678699|ref|NP_275814.1| - 1.1e-68 231.0 26.7 1.3e-68 230.8 26.7 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) E1-E2_ATPase PF00122.20 gi|15678699|ref|NP_275814.1| - 0.024 14.2 1.3 0.024 14.2 1.3 2.1 2 1 1 3 3 3 0 E1-E2 ATPase DUF2198 PF09964.9 gi|15678699|ref|NP_275814.1| - 1.3 9.1 9.2 7.7 6.7 0.1 2.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) PEP-CTERM PF07589.11 gi|15678699|ref|NP_275814.1| - 1.4 9.1 4.7 5.9 7.1 0.1 3.4 2 0 0 2 2 2 0 PEP-CTERM motif CobN-Mg_chel PF02514.16 gi|15678700|ref|NP_275815.1| - 1.6e-266 887.2 1.6 5.2e-205 683.5 0.2 3.3 2 2 0 2 2 2 2 CobN/Magnesium Chelatase DUF1643 PF07799.12 gi|15678700|ref|NP_275815.1| - 0.051 13.8 0.1 0.33 11.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1643) FmdE PF02663.14 gi|15678701|ref|NP_275816.1| - 3.2e-42 143.7 0.0 6.7e-21 74.7 0.0 3.4 3 0 0 3 3 3 2 FmdE, Molybdenum formylmethanofuran dehydrogenase operon NAS PF03059.16 gi|15678702|ref|NP_275817.1| - 3.8e-24 85.5 0.0 5.2e-24 85.1 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein FluMu_N PF17891.1 gi|15678702|ref|NP_275817.1| - 0.017 14.9 0.0 0.035 13.9 0.0 1.5 1 0 0 1 1 1 0 Mu-like prophage FluMu N-terminal domain Acetyltransf_1 PF00583.25 gi|15678703|ref|NP_275818.1| - 5.6e-15 55.6 0.3 8e-15 55.1 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15678703|ref|NP_275818.1| - 6.1e-09 35.9 0.0 1e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15678703|ref|NP_275818.1| - 6.7e-09 36.1 0.1 1.1e-08 35.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|15678703|ref|NP_275818.1| - 0.00035 20.7 0.0 0.00058 20.0 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15678703|ref|NP_275818.1| - 0.00075 19.6 0.0 0.00094 19.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|15678703|ref|NP_275818.1| - 0.0033 17.5 0.0 0.0071 16.5 0.0 1.6 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 gi|15678703|ref|NP_275818.1| - 0.0034 17.3 0.0 0.0074 16.3 0.0 1.6 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase FR47 PF08445.10 gi|15678703|ref|NP_275818.1| - 0.018 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein DUF3194 PF11419.8 gi|15678704|ref|NP_275819.1| - 2.5e-31 107.8 3.5 2.8e-31 107.7 3.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3194) Prefoldin_2 PF01920.20 gi|15678705|ref|NP_275820.1| - 5.4e-25 87.4 22.6 6e-25 87.3 22.6 1.0 1 0 0 1 1 1 1 Prefoldin subunit IFT57 PF10498.9 gi|15678705|ref|NP_275820.1| - 0.0093 15.0 17.2 0.031 13.3 3.6 2.0 2 0 0 2 2 2 2 Intra-flagellar transport protein 57 Phage_GP20 PF06810.11 gi|15678705|ref|NP_275820.1| - 0.011 15.5 9.5 0.31 10.9 1.1 2.2 2 0 0 2 2 2 0 Phage minor structural protein GP20 ASD2 PF08687.11 gi|15678705|ref|NP_275820.1| - 0.015 14.9 13.0 0.018 14.6 13.0 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 DUF4265 PF14085.6 gi|15678705|ref|NP_275820.1| - 0.021 14.8 0.4 0.069 13.1 0.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4265) GvpG PF05120.12 gi|15678705|ref|NP_275820.1| - 0.026 14.5 3.4 0.026 14.5 3.4 2.2 2 0 0 2 2 2 0 Gas vesicle protein G DUF790 PF05626.11 gi|15678705|ref|NP_275820.1| - 0.027 13.2 4.3 0.032 13.0 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF790) GerE PF00196.19 gi|15678705|ref|NP_275820.1| - 0.032 13.8 0.6 0.87 9.2 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family DUF4795 PF16043.5 gi|15678705|ref|NP_275820.1| - 0.07 12.7 13.5 0.096 12.3 13.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) FlaC_arch PF05377.11 gi|15678705|ref|NP_275820.1| - 0.2 12.1 15.1 2.1 8.8 7.9 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DHR10 PF18595.1 gi|15678705|ref|NP_275820.1| - 0.2 11.7 22.1 0.65 10.1 7.4 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain Cas_Cas1 PF01867.16 gi|15678705|ref|NP_275820.1| - 0.6 9.2 9.4 1.3 8.1 9.5 1.5 1 1 0 1 1 1 0 CRISPR associated protein Cas1 DUF3450 PF11932.8 gi|15678705|ref|NP_275820.1| - 0.61 9.4 24.4 0.048 12.9 10.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) POTRA_TamA_1 PF17243.2 gi|15678705|ref|NP_275820.1| - 0.85 9.7 10.3 1.1 9.4 1.2 2.2 2 0 0 2 2 2 0 POTRA domain TamA domain 1 DUF87 PF01935.17 gi|15678705|ref|NP_275820.1| - 0.91 9.6 6.0 1.1 9.4 6.0 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain Laminin_II PF06009.12 gi|15678705|ref|NP_275820.1| - 1.1 9.3 16.1 5 7.1 16.1 1.8 1 1 0 1 1 1 0 Laminin Domain II IclR PF01614.18 gi|15678705|ref|NP_275820.1| - 1.3 8.8 5.9 2.2 8.1 0.5 2.1 1 1 1 2 2 2 0 Bacterial transcriptional regulator NPV_P10 PF05531.12 gi|15678705|ref|NP_275820.1| - 1.6 9.3 8.5 4 8.0 2.6 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4407 PF14362.6 gi|15678705|ref|NP_275820.1| - 2.5 7.4 10.2 3 7.1 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) KfrA_N PF11740.8 gi|15678705|ref|NP_275820.1| - 2.5 8.8 17.3 6.3 7.5 1.2 2.1 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term Occludin_ELL PF07303.13 gi|15678705|ref|NP_275820.1| - 3.1 8.6 12.9 6.1 7.6 6.1 2.1 1 1 1 2 2 2 0 Occludin homology domain E2F_CC-MB PF16421.5 gi|15678705|ref|NP_275820.1| - 6.9 7.1 11.4 6.9 7.1 1.2 2.3 2 0 0 2 2 2 0 E2F transcription factor CC-MB domain YojJ PF10372.9 gi|15678705|ref|NP_275820.1| - 7.4 6.7 10.0 3.1 7.9 2.3 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Spc7 PF08317.11 gi|15678705|ref|NP_275820.1| - 7.5 5.3 21.7 38 3.0 21.7 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein Pcc1 PF09341.10 gi|15678706|ref|NP_275821.1| - 7.2e-11 42.1 0.0 8.5e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Spt4 PF06093.13 gi|15679904|ref|NP_275823.1| - 0.0077 16.3 0.3 0.0077 16.3 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger DNA_RNApol_7kD PF03604.13 gi|15679904|ref|NP_275823.1| - 0.0089 15.7 7.1 0.019 14.6 7.1 1.5 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|15679904|ref|NP_275823.1| - 0.01 15.4 0.9 2.3 7.9 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-C2HC5 PF06221.13 gi|15679904|ref|NP_275823.1| - 0.015 15.3 0.2 0.017 15.1 0.2 1.1 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Zn-ribbon_8 PF09723.10 gi|15679904|ref|NP_275823.1| - 0.017 15.2 1.6 0.028 14.5 1.6 1.3 1 0 0 1 1 1 0 Zinc ribbon domain DZR PF12773.7 gi|15679904|ref|NP_275823.1| - 0.019 15.0 1.7 0.026 14.5 1.7 1.3 1 1 0 1 1 1 0 Double zinc ribbon RNHCP PF12647.7 gi|15679904|ref|NP_275823.1| - 0.025 14.5 0.1 0.026 14.5 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain HypA PF01155.19 gi|15679904|ref|NP_275823.1| - 0.029 14.4 0.5 0.03 14.3 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|15679904|ref|NP_275823.1| - 0.073 12.5 1.9 4.1 6.9 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15679904|ref|NP_275823.1| - 0.52 9.9 3.8 0.71 9.4 0.1 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding Med27 PF11571.8 gi|15679904|ref|NP_275823.1| - 0.62 10.5 3.3 6 7.3 3.3 1.9 1 1 0 1 1 1 0 Mediator complex subunit 27 Ribosomal_L37ae PF01780.19 gi|15678708|ref|NP_275824.1| - 1.4e-34 118.0 4.5 1.5e-34 117.9 4.5 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|15678708|ref|NP_275824.1| - 0.0025 17.8 2.6 0.0036 17.2 2.6 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15678708|ref|NP_275824.1| - 0.0068 16.5 0.6 4.4 7.5 0.4 2.2 2 0 0 2 2 2 2 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15678708|ref|NP_275824.1| - 0.026 14.4 1.4 0.026 14.4 1.4 1.7 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Elf1 PF05129.13 gi|15678708|ref|NP_275824.1| - 0.026 14.5 4.3 0.052 13.6 4.3 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Rep_fac-A_C PF08646.10 gi|15678708|ref|NP_275824.1| - 0.028 14.2 0.6 0.035 13.9 0.6 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain IBR PF01485.21 gi|15678708|ref|NP_275824.1| - 0.032 14.5 0.7 0.04 14.1 0.7 1.1 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain DZR PF12773.7 gi|15678708|ref|NP_275824.1| - 0.063 13.3 1.0 0.12 12.4 1.0 1.4 1 1 0 1 1 1 0 Double zinc ribbon Rad50_zn_hook PF04423.14 gi|15678708|ref|NP_275824.1| - 0.069 13.0 0.6 0.069 13.0 0.6 1.5 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-H2C2_2 PF13465.6 gi|15678708|ref|NP_275824.1| - 0.071 13.6 1.8 8.3 7.0 0.4 2.2 2 0 0 2 2 2 0 Zinc-finger double domain A2L_zn_ribbon PF08792.10 gi|15678708|ref|NP_275824.1| - 0.11 12.2 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain zf-ACC PF17848.1 gi|15678708|ref|NP_275824.1| - 0.11 12.5 3.7 4 7.6 0.6 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-BED PF02892.15 gi|15678708|ref|NP_275824.1| - 0.13 12.3 1.5 0.23 11.5 1.5 1.6 1 1 0 1 1 1 0 BED zinc finger Zn_ribbon_SprT PF17283.2 gi|15678708|ref|NP_275824.1| - 0.15 12.0 3.1 0.33 10.9 3.1 1.5 1 1 0 1 1 1 0 SprT-like zinc ribbon domain zf-tcix PF14952.6 gi|15678708|ref|NP_275824.1| - 0.18 11.5 0.5 0.18 11.5 0.5 2.6 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zinc_ribbon_4 PF13717.6 gi|15678708|ref|NP_275824.1| - 0.3 11.1 4.2 0.87 9.6 0.7 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Mut7-C PF01927.16 gi|15678708|ref|NP_275824.1| - 1 9.5 4.3 5.3 7.1 4.3 1.9 1 1 0 1 1 1 0 Mut7-C RNAse domain DUF35_N PF12172.8 gi|15678708|ref|NP_275824.1| - 1.3 9.0 6.1 7.6 6.5 0.6 2.5 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) RNase_PH PF01138.21 gi|15678709|ref|NP_275825.1| - 3.9e-33 114.7 0.0 5.8e-33 114.2 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|15678709|ref|NP_275825.1| - 4.9e-14 52.1 0.2 1.1e-13 51.0 0.2 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|15678710|ref|NP_275826.1| - 8.6e-37 126.6 0.0 1.6e-36 125.7 0.0 1.4 2 0 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|15678710|ref|NP_275826.1| - 2.6e-16 59.4 0.0 6.4e-16 58.1 0.1 1.6 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 ECR1_N PF14382.6 gi|15678711|ref|NP_275827.1| - 9.7e-09 34.9 0.0 1.6e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_6 PF15985.5 gi|15678711|ref|NP_275827.1| - 1.1e-08 35.3 0.1 2e-08 34.5 0.1 1.4 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|15678711|ref|NP_275827.1| - 8.6e-07 28.7 0.3 2.5e-06 27.2 0.3 1.8 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|15678711|ref|NP_275827.1| - 0.00094 19.0 0.6 0.0023 17.7 0.6 1.8 1 0 0 1 1 1 1 KH domain GshA PF08886.11 gi|15678711|ref|NP_275827.1| - 0.11 11.0 0.1 0.16 10.5 0.1 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase KH_4 PF13083.6 gi|15678711|ref|NP_275827.1| - 3 7.8 7.4 0.33 10.8 0.2 2.9 3 0 0 3 3 3 0 KH domain SBDS PF01172.18 gi|15678712|ref|NP_275828.1| - 3.7e-22 78.2 0.0 6e-22 77.5 0.0 1.3 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|15678712|ref|NP_275828.1| - 3.1e-20 72.3 0.0 5.2e-20 71.6 0.0 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain DUF3850 PF12961.7 gi|15678712|ref|NP_275828.1| - 0.15 12.2 0.1 0.27 11.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3850) Proteasome PF00227.26 gi|15678713|ref|NP_275829.1| - 1.2e-63 214.0 0.1 1.6e-63 213.7 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|15678713|ref|NP_275829.1| - 1.2e-14 53.6 0.5 4.1e-14 51.9 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature DUF982 PF06169.12 gi|15678713|ref|NP_275829.1| - 0.25 11.4 0.0 0.25 11.4 0.0 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF982) RNase_P_Rpp14 PF01900.19 gi|15678714|ref|NP_275830.1| - 4.7e-19 68.5 0.1 5.6e-19 68.3 0.1 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family RNase_P_p30 PF01876.16 gi|15678715|ref|NP_275831.1| - 5.5e-52 176.4 0.0 6.3e-52 176.2 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit p30 RNA_binding PF01877.17 gi|15678716|ref|NP_275832.1| - 9.3e-34 116.3 0.0 1.1e-33 116.0 0.0 1.1 1 0 0 1 1 1 1 RNA binding Ribosomal_L15e PF00827.17 gi|15678717|ref|NP_275833.1| - 6.6e-76 254.3 8.3 7.3e-76 254.2 8.3 1.0 1 0 0 1 1 1 1 Ribosomal L15 CMD PF02627.20 gi|15678718|ref|NP_275834.1| - 5.7e-13 48.7 0.0 7.3e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF1454 PF07305.12 gi|15678718|ref|NP_275834.1| - 0.012 15.1 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1454) Band_7 PF01145.25 gi|15678719|ref|NP_275835.1| - 3.2e-34 118.5 8.9 5.7e-34 117.7 8.9 1.5 1 1 0 1 1 1 1 SPFH domain / Band 7 family Band_7_C PF16200.5 gi|15678719|ref|NP_275835.1| - 0.043 13.9 0.4 0.15 12.2 0.0 2.1 2 0 0 2 2 2 0 C-terminal region of band_7 NfeD PF01957.18 gi|15678720|ref|NP_275836.1| - 1.5e-20 73.3 3.3 1.5e-20 73.3 3.3 1.6 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding HTH_3 PF01381.22 gi|15678721|ref|NP_275837.1| - 0.00022 21.2 0.1 0.00074 19.5 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix PNK3P PF08645.11 gi|15678721|ref|NP_275837.1| - 0.013 15.2 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Sigma70_r4 PF04545.16 gi|15678721|ref|NP_275837.1| - 0.019 14.4 0.0 0.038 13.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_25 PF13413.6 gi|15678721|ref|NP_275837.1| - 0.065 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MacB_PCD PF12704.7 gi|15678722|ref|NP_275838.1| - 3.5e-23 83.0 1.5 3.5e-23 83.0 1.5 2.2 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|15678722|ref|NP_275838.1| - 3.2e-14 53.2 2.3 3.2e-14 53.2 2.3 3.0 3 0 0 3 3 3 1 FtsX-like permease family COX7a PF02238.15 gi|15678722|ref|NP_275838.1| - 0.073 13.5 0.2 0.29 11.5 0.2 2.0 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII ABC_tran PF00005.27 gi|15678723|ref|NP_275839.1| - 4.1e-34 118.0 0.0 5.3e-34 117.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|15678723|ref|NP_275839.1| - 2.3e-08 33.7 0.6 9.8e-05 21.9 0.0 2.0 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|15678723|ref|NP_275839.1| - 2.6e-06 27.5 0.2 0.017 14.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|15678723|ref|NP_275839.1| - 4e-05 24.1 0.1 7.5e-05 23.2 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15678723|ref|NP_275839.1| - 4.1e-05 23.2 0.2 7.3e-05 22.4 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15678723|ref|NP_275839.1| - 6e-05 23.3 0.2 0.0012 19.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|15678723|ref|NP_275839.1| - 0.00086 18.9 0.0 0.28 10.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|15678723|ref|NP_275839.1| - 0.00091 19.2 0.0 0.0021 18.0 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|15678723|ref|NP_275839.1| - 0.01 16.4 0.1 0.018 15.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|15678723|ref|NP_275839.1| - 0.012 15.3 0.0 0.41 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain NTPase_1 PF03266.15 gi|15678723|ref|NP_275839.1| - 0.022 14.6 0.2 1.8 8.4 0.0 2.4 1 1 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 gi|15678723|ref|NP_275839.1| - 0.034 14.2 0.9 0.22 11.6 0.9 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase G-alpha PF00503.20 gi|15678723|ref|NP_275839.1| - 0.038 13.1 0.0 0.048 12.8 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Mg_chelatase PF01078.21 gi|15678723|ref|NP_275839.1| - 0.044 13.1 0.5 1.1 8.6 0.0 2.3 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|15678723|ref|NP_275839.1| - 0.045 13.5 0.1 0.26 11.0 0.1 2.1 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 gi|15678723|ref|NP_275839.1| - 0.05 14.0 0.4 1.1 9.7 0.4 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|15678723|ref|NP_275839.1| - 0.06 13.5 2.6 0.82 9.8 2.6 2.4 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|15678723|ref|NP_275839.1| - 0.07 13.7 0.1 0.17 12.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15678723|ref|NP_275839.1| - 0.086 13.1 0.1 0.31 11.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|15678723|ref|NP_275839.1| - 0.11 11.6 0.1 0.22 10.7 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 gi|15678723|ref|NP_275839.1| - 0.12 12.0 0.1 0.15 11.6 0.1 1.6 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|15678723|ref|NP_275839.1| - 0.13 12.3 0.2 0.62 10.1 0.1 1.9 2 0 0 2 2 2 0 Dynamin family AAA_24 PF13479.6 gi|15678723|ref|NP_275839.1| - 0.14 11.8 0.0 0.38 10.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|15678723|ref|NP_275839.1| - 0.15 12.3 0.0 2.4 8.4 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 gi|15678723|ref|NP_275839.1| - 0.16 11.8 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Flavoprotein PF02441.19 gi|15678724|ref|NP_275840.1| - 9.1e-15 54.8 0.0 1.2e-14 54.4 0.0 1.3 1 1 0 1 1 1 1 Flavoprotein Pepsin-I3 PF06394.13 gi|15678725|ref|NP_275841.1| - 0.091 13.0 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Pepsin inhibitor-3-like repeated domain Adenosine_kin PF04008.14 gi|15678726|ref|NP_275842.1| - 8.9e-76 252.9 0.4 1e-75 252.7 0.4 1.0 1 0 0 1 1 1 1 Adenosine specific kinase Tricorn_C1 PF14684.6 gi|15678726|ref|NP_275842.1| - 0.18 11.9 0.0 0.4 10.8 0.0 1.6 1 0 0 1 1 1 0 Tricorn protease C1 domain Cupin_2 PF07883.11 gi|15678727|ref|NP_275843.1| - 1.3e-16 60.1 0.0 3.5e-16 58.7 0.0 1.7 2 0 0 2 2 2 1 Cupin domain HTH_3 PF01381.22 gi|15678727|ref|NP_275843.1| - 6.4e-10 38.9 0.0 9.8e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|15678727|ref|NP_275843.1| - 3.2e-09 36.7 0.2 5.3e-09 36.0 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|15678727|ref|NP_275843.1| - 7.6e-08 32.6 0.0 1.3e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|15678727|ref|NP_275843.1| - 0.0021 17.7 0.0 0.0041 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) CENP-C_C PF11699.8 gi|15678727|ref|NP_275843.1| - 0.0022 18.2 0.0 0.0043 17.2 0.0 1.5 1 1 0 1 1 1 1 Mif2/CENP-C like AraC_binding PF02311.19 gi|15678727|ref|NP_275843.1| - 0.0023 17.8 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|15678727|ref|NP_275843.1| - 0.1 12.5 0.1 0.2 11.5 0.0 1.6 2 0 0 2 2 2 0 Mannose-6-phosphate isomerase Asp_Arg_Hydrox PF05118.15 gi|15678727|ref|NP_275843.1| - 0.13 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase AMP-binding PF00501.28 gi|15678728|ref|NP_275844.1| - 5.4e-69 232.8 0.0 6.1e-69 232.6 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15678729|ref|NP_275845.1| - 5.5e-25 88.1 0.4 7e-25 87.8 0.4 1.1 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15678729|ref|NP_275845.1| - 0.003 16.2 0.1 0.0051 15.5 0.1 1.4 2 0 0 2 2 2 1 AMP-binding enzyme Fer4_7 PF12838.7 gi|15678730|ref|NP_275846.1| - 1.5e-09 38.3 10.0 1.5e-09 38.3 10.0 1.6 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678730|ref|NP_275846.1| - 6.1e-09 35.9 7.8 9.7e-09 35.2 7.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678730|ref|NP_275846.1| - 1.8e-07 31.2 23.1 1.7e-06 28.1 11.6 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678730|ref|NP_275846.1| - 1.4e-06 28.4 22.0 9e-06 25.8 11.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678730|ref|NP_275846.1| - 3.5e-06 26.9 15.6 0.00092 19.2 2.5 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|15678730|ref|NP_275846.1| - 1.2e-05 24.9 18.8 0.0013 18.5 3.5 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678730|ref|NP_275846.1| - 3.1e-05 23.8 15.2 0.0014 18.6 1.7 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678730|ref|NP_275846.1| - 4.4e-05 24.3 13.7 0.0035 18.2 2.5 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|15678730|ref|NP_275846.1| - 0.00054 20.7 7.6 0.066 14.1 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678730|ref|NP_275846.1| - 0.00062 20.2 11.0 0.011 16.2 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678730|ref|NP_275846.1| - 0.0012 19.2 18.6 0.066 13.8 6.6 2.7 1 1 1 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15678730|ref|NP_275846.1| - 0.015 16.2 14.9 0.13 13.3 3.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678730|ref|NP_275846.1| - 0.022 15.3 14.3 0.093 13.3 2.8 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|15678730|ref|NP_275846.1| - 0.022 15.3 14.1 1.5 9.4 14.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15678730|ref|NP_275846.1| - 0.96 10.2 9.5 0.89 10.3 1.6 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain POR_N PF01855.19 gi|15678731|ref|NP_275847.1| - 4.3e-53 180.4 0.0 5.2e-53 180.1 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|15678731|ref|NP_275847.1| - 1.7e-26 92.5 0.1 3.9e-26 91.3 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15678731|ref|NP_275847.1| - 4.3e-06 26.6 0.0 8.4e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|15678731|ref|NP_275847.1| - 0.0051 16.4 0.3 0.0093 15.6 0.3 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain POR PF01558.18 gi|15678732|ref|NP_275848.1| - 4.3e-42 144.2 0.1 7.5e-42 143.4 0.1 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|15678732|ref|NP_275848.1| - 8.6e-23 80.8 0.0 1.7e-22 79.8 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|15678732|ref|NP_275848.1| - 0.16 10.8 0.2 0.25 10.2 0.2 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component Asparaginase PF00710.20 gi|15678733|ref|NP_275849.1| - 4.5e-60 202.5 0.1 8.4e-60 201.6 0.1 1.4 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|15678733|ref|NP_275849.1| - 1.2e-33 115.7 0.0 7.7e-33 113.1 0.0 2.0 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|15678733|ref|NP_275849.1| - 1.4e-20 72.3 0.3 3e-20 71.3 0.3 1.6 1 0 0 1 1 1 1 GatD N-terminal domain GatB_N PF02934.15 gi|15678734|ref|NP_275850.1| - 6.5e-68 229.1 0.0 8.6e-68 228.7 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|15678734|ref|NP_275850.1| - 8.9e-24 84.1 0.1 1.8e-23 83.1 0.1 1.5 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|15678734|ref|NP_275850.1| - 1.5e-20 73.2 0.0 7.4e-20 71.0 0.0 2.2 2 0 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|15678734|ref|NP_275850.1| - 3.9e-06 27.0 0.2 1.1e-05 25.6 0.2 1.8 1 0 0 1 1 1 1 Yqey-like protein Pyr_redox_2 PF07992.14 gi|15678735|ref|NP_275851.1| - 6.9e-50 169.9 2.9 7.9e-50 169.7 2.9 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15678735|ref|NP_275851.1| - 9e-26 90.8 2.7 8.7e-21 74.5 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15678735|ref|NP_275851.1| - 3.4e-18 66.0 0.3 3.4e-18 66.0 0.3 3.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|15678735|ref|NP_275851.1| - 3.5e-07 29.3 6.3 0.00011 21.1 0.7 2.9 3 0 0 3 3 3 2 HI0933-like protein GIDA PF01134.22 gi|15678735|ref|NP_275851.1| - 4.3e-07 29.4 7.7 0.017 14.2 0.8 3.8 3 1 1 4 4 4 2 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|15678735|ref|NP_275851.1| - 1.4e-05 24.5 2.3 0.0056 16.0 0.5 2.4 2 1 0 2 2 2 2 FAD binding domain K_oxygenase PF13434.6 gi|15678735|ref|NP_275851.1| - 2.8e-05 23.4 0.7 0.049 12.8 0.0 3.1 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 gi|15678735|ref|NP_275851.1| - 4.4e-05 23.6 0.3 0.0018 18.5 0.1 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|15678735|ref|NP_275851.1| - 0.00025 20.3 1.3 0.00025 20.3 1.3 3.2 3 1 1 4 4 4 1 FAD binding domain NAD_binding_7 PF13241.6 gi|15678735|ref|NP_275851.1| - 0.00042 20.7 0.3 0.0023 18.4 0.1 2.2 2 0 0 2 2 2 1 Putative NAD(P)-binding DAO PF01266.24 gi|15678735|ref|NP_275851.1| - 0.00076 19.2 5.9 0.26 10.8 1.8 2.6 2 1 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|15678735|ref|NP_275851.1| - 0.00085 18.8 6.8 0.0011 18.4 2.5 2.6 2 2 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15678735|ref|NP_275851.1| - 0.0089 15.3 4.7 0.01 15.1 2.5 2.2 2 1 0 2 2 2 1 Thi4 family Shikimate_DH PF01488.20 gi|15678735|ref|NP_275851.1| - 0.072 13.1 3.6 1 9.4 0.0 3.5 3 1 1 4 4 4 0 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 gi|15678735|ref|NP_275851.1| - 0.093 12.3 0.0 0.22 11.1 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|15678735|ref|NP_275851.1| - 0.34 10.2 4.3 7.9 5.7 0.3 2.6 3 1 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain GATase PF00117.28 gi|15678736|ref|NP_275852.1| - 1.8e-42 145.3 0.1 2e-42 145.1 0.1 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15678736|ref|NP_275852.1| - 1.1e-14 54.7 0.4 3.9e-14 52.9 0.3 1.9 1 1 0 1 1 1 1 Peptidase C26 GMP_synt_C PF00958.22 gi|15678737|ref|NP_275853.1| - 1.3e-31 108.5 0.0 2.6e-31 107.5 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|15678737|ref|NP_275853.1| - 3.3e-10 39.5 0.0 9.6e-06 24.9 0.0 2.3 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|15678737|ref|NP_275853.1| - 2.9e-05 23.7 0.0 0.0027 17.2 0.0 2.3 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|15678737|ref|NP_275853.1| - 0.00074 19.2 0.0 0.0016 18.1 0.0 1.6 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|15678737|ref|NP_275853.1| - 0.00078 19.3 0.0 0.0012 18.6 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|15678737|ref|NP_275853.1| - 0.0011 17.9 0.0 0.014 14.2 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase Arginosuc_synth PF00764.19 gi|15678737|ref|NP_275853.1| - 0.011 15.0 0.0 0.021 14.2 0.0 1.4 1 0 0 1 1 1 0 Arginosuccinate synthase PAPS_reduct PF01507.19 gi|15678737|ref|NP_275853.1| - 0.016 15.3 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|15678737|ref|NP_275853.1| - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase SelR PF01641.18 gi|15678738|ref|NP_275854.1| - 1.2e-54 183.5 0.0 1.5e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|15678738|ref|NP_275854.1| - 0.0036 17.5 0.1 0.0059 16.8 0.1 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Syntaxin_2 PF14523.6 gi|15678740|ref|NP_275856.1| - 0.031 14.7 0.0 0.072 13.5 0.0 1.6 2 0 0 2 2 2 0 Syntaxin-like protein MerR-DNA-bind PF09278.11 gi|15678740|ref|NP_275856.1| - 0.11 13.0 0.0 0.25 11.9 0.0 1.7 2 0 0 2 2 2 0 MerR, DNA binding CobN-Mg_chel PF02514.16 gi|15678741|ref|NP_275857.1| - 1.3e-218 728.5 0.0 3.2e-166 555.1 0.0 2.1 2 0 0 2 2 2 2 CobN/Magnesium Chelatase CARDB PF07705.11 gi|15678741|ref|NP_275857.1| - 6.6e-45 151.6 5.7 2e-24 85.8 0.2 2.6 2 0 0 2 2 2 2 CARDB Lysyl_oxidase PF01186.17 gi|15678741|ref|NP_275857.1| - 1.9e-05 24.5 2.1 0.062 13.0 0.2 2.5 2 0 0 2 2 2 2 Lysyl oxidase Gryzun-like PF12742.7 gi|15678741|ref|NP_275857.1| - 7.7e-05 22.6 0.2 1.2 9.1 0.0 3.5 3 0 0 3 3 3 2 Gryzun, putative Golgi trafficking DUF3826 PF12875.7 gi|15678741|ref|NP_275857.1| - 0.18 12.0 0.3 0.37 10.9 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3826) DUF3344 PF11824.8 gi|15678742|ref|NP_275858.1| - 3e-67 227.2 16.9 3.4e-67 227.0 16.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) CDH-cyt PF16010.5 gi|15678742|ref|NP_275858.1| - 0.026 14.2 0.2 0.043 13.5 0.2 1.4 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase DUF3344 PF11824.8 gi|15678743|ref|NP_275859.1| - 6.5e-95 317.9 29.8 7.3e-58 196.4 15.3 7.7 9 1 1 10 10 8 3 Protein of unknown function (DUF3344) NosD PF05048.13 gi|15678743|ref|NP_275859.1| - 1.3e-43 149.0 90.7 1.6e-30 106.2 43.4 7.4 3 3 2 5 5 3 3 Periplasmic copper-binding protein (NosD) PMBR PF09373.10 gi|15678743|ref|NP_275859.1| - 8.5e-27 92.0 6.4 1.2e-07 31.6 0.3 4.1 3 0 0 3 3 3 3 Pseudomurein-binding repeat CARDB PF07705.11 gi|15678743|ref|NP_275859.1| - 8.7e-24 83.7 25.9 4e-22 78.4 7.3 8.2 8 1 3 11 11 8 4 CARDB Beta_helix PF13229.6 gi|15678743|ref|NP_275859.1| - 8.1e-21 74.5 75.0 3.1e-14 53.1 37.2 7.9 4 2 4 8 8 6 3 Right handed beta helix region PKD PF00801.20 gi|15678743|ref|NP_275859.1| - 7.8e-20 70.5 10.2 4.2e-13 48.9 2.1 5.6 6 0 0 6 6 6 2 PKD domain PKD_3 PF16820.5 gi|15678743|ref|NP_275859.1| - 0.00016 21.3 7.8 0.2 11.5 0.2 4.5 5 0 0 5 5 5 2 PKD-like domain DUF756 PF05506.12 gi|15678743|ref|NP_275859.1| - 0.00052 20.9 1.3 1.4 9.9 0.1 4.1 3 0 0 3 3 3 2 Domain of unknown function (DUF756) Cucumo_coat PF00760.18 gi|15678743|ref|NP_275859.1| - 0.0028 17.3 5.6 0.53 9.9 0.1 3.1 3 0 0 3 3 3 2 Cucumovirus coat protein Cupredoxin_1 PF13473.6 gi|15678743|ref|NP_275859.1| - 0.059 13.5 2.7 1.1 9.4 0.1 4.3 4 1 0 4 4 4 0 Cupredoxin-like domain Big_4 PF07532.11 gi|15678743|ref|NP_275859.1| - 2.1 8.2 8.4 7.3 6.4 0.6 3.8 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 4) DUF3344 PF11824.8 gi|15678744|ref|NP_275860.1| - 4.8e-66 223.2 25.4 4.8e-66 223.2 25.4 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|15678744|ref|NP_275860.1| - 4.9e-28 97.4 5.9 4.9e-28 97.4 5.9 3.2 3 1 1 4 4 4 1 CARDB Nre_N PF04894.12 gi|15678745|ref|NP_275861.1| - 1.7e-14 54.4 0.1 1.7e-14 54.3 0.1 1.0 1 0 0 1 1 1 1 Archaeal Nre, N-terminal NosD PF05048.13 gi|15678746|ref|NP_275862.1| - 5.3e-38 130.7 39.1 5.3e-38 130.7 39.1 1.7 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) PMBR PF09373.10 gi|15678746|ref|NP_275862.1| - 5.9e-28 95.7 5.7 3.2e-08 33.3 0.3 3.7 3 0 0 3 3 3 3 Pseudomurein-binding repeat Beta_helix PF13229.6 gi|15678746|ref|NP_275862.1| - 1.3e-19 70.6 34.3 1.3e-19 70.6 34.3 3.6 1 1 2 3 3 3 2 Right handed beta helix region Alpha_adaptinC2 PF02883.20 gi|15678746|ref|NP_275862.1| - 0.029 14.7 2.1 0.044 14.1 0.1 2.3 2 0 0 2 2 2 0 Adaptin C-terminal domain fn3_3 PF14686.6 gi|15678746|ref|NP_275862.1| - 0.047 13.5 1.7 4.5 7.1 0.1 3.5 2 0 0 2 2 2 0 Polysaccharide lyase family 4, domain II PapC_N PF13954.6 gi|15678746|ref|NP_275862.1| - 0.1 12.6 0.3 1.1 9.3 0.0 2.5 2 0 0 2 2 2 0 PapC N-terminal domain Lectin_N PF03954.14 gi|15678746|ref|NP_275862.1| - 0.17 11.7 1.2 0.28 10.9 1.2 1.3 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain Nre_N PF04894.12 gi|15678747|ref|NP_275863.1| - 5.9e-86 288.6 0.0 7.7e-86 288.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|15678747|ref|NP_275863.1| - 5.1e-35 119.7 0.0 9e-35 118.9 0.0 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal DegT_DnrJ_EryC1 PF01041.17 gi|15678748|ref|NP_275864.1| - 2.8e-06 26.9 0.0 7.6e-06 25.5 0.0 1.7 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family CGI-121 PF08617.10 gi|15678749|ref|NP_275865.1| - 2.8e-06 27.5 0.0 3.2e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 HMGL-like PF00682.19 gi|15678750|ref|NP_275866.1| - 3.3e-78 262.9 0.7 6e-78 262.0 0.7 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|15678750|ref|NP_275866.1| - 2.1e-33 115.0 0.5 4.5e-33 114.0 0.5 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain UPF0020 PF01170.18 gi|15678751|ref|NP_275867.1| - 7.7e-53 179.1 0.0 4.3e-52 176.7 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|15678751|ref|NP_275867.1| - 6.2e-23 81.5 0.0 9.1e-23 81.0 0.0 1.3 1 0 0 1 1 1 1 THUMP domain MTS PF05175.14 gi|15678751|ref|NP_275867.1| - 1.4e-12 47.4 0.0 2.6e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_N4_Mtase PF01555.18 gi|15678751|ref|NP_275867.1| - 3.7e-11 43.2 0.0 9.2e-07 28.8 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_31 PF13847.6 gi|15678751|ref|NP_275867.1| - 3.9e-11 43.0 0.0 5.8e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15678751|ref|NP_275867.1| - 1.1e-08 35.7 0.0 2.6e-08 34.5 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|15678751|ref|NP_275867.1| - 2.4e-07 30.6 0.0 3.8e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|15678751|ref|NP_275867.1| - 9.3e-06 25.3 0.0 1.5e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase AviRa PF11599.8 gi|15678751|ref|NP_275867.1| - 1.3e-05 24.8 0.0 0.092 12.2 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa N6_Mtase PF02384.16 gi|15678751|ref|NP_275867.1| - 1.8e-05 24.2 0.0 9.3e-05 21.8 0.0 1.9 1 1 0 1 1 1 1 N-6 DNA Methylase CMAS PF02353.20 gi|15678751|ref|NP_275867.1| - 5.2e-05 22.7 0.0 7.6e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|15678751|ref|NP_275867.1| - 5.9e-05 22.5 0.0 0.00016 21.1 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|15678751|ref|NP_275867.1| - 0.00042 20.9 0.0 0.00097 19.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15678751|ref|NP_275867.1| - 0.001 19.8 0.0 0.0022 18.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15678751|ref|NP_275867.1| - 0.0017 17.8 0.0 0.003 17.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DUF43 PF01861.16 gi|15678751|ref|NP_275867.1| - 0.0032 16.7 0.0 0.0054 16.0 0.0 1.3 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain MethyltransfD12 PF02086.15 gi|15678751|ref|NP_275867.1| - 0.02 14.6 0.0 2 8.0 0.0 2.1 1 1 1 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase Eco57I PF07669.11 gi|15678751|ref|NP_275867.1| - 0.024 15.2 0.0 0.043 14.3 0.0 1.4 1 0 0 1 1 1 0 Eco57I restriction-modification methylase N6-adenineMlase PF10237.9 gi|15678751|ref|NP_275867.1| - 0.069 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase Methyltransf_23 PF13489.6 gi|15678751|ref|NP_275867.1| - 0.098 12.5 0.0 0.33 10.8 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 gi|15678751|ref|NP_275867.1| - 0.1 12.4 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Met-10+ like-protein Lycopene_cycl PF05834.12 gi|15678752|ref|NP_275868.1| - 3.9e-12 45.9 0.0 1.1e-11 44.5 0.0 1.7 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|15678752|ref|NP_275868.1| - 8.8e-10 38.4 2.7 7.2e-05 22.2 0.5 2.9 2 1 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.14 gi|15678752|ref|NP_275868.1| - 1e-09 37.8 0.0 0.0043 16.0 0.0 3.0 3 0 0 3 3 3 3 Tryptophan halogenase DAO PF01266.24 gi|15678752|ref|NP_275868.1| - 2.6e-08 33.9 0.1 0.00025 20.8 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15678752|ref|NP_275868.1| - 0.00011 21.6 0.1 0.00026 20.3 0.1 1.7 1 1 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|15678752|ref|NP_275868.1| - 0.00023 20.5 0.1 0.00076 18.8 0.1 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|15678752|ref|NP_275868.1| - 0.00029 19.7 0.1 0.0028 16.4 0.0 2.0 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|15678752|ref|NP_275868.1| - 0.00033 20.8 0.1 0.00086 19.5 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|15678752|ref|NP_275868.1| - 0.0008 18.9 0.1 0.0013 18.2 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase XdhC_C PF13478.6 gi|15678752|ref|NP_275868.1| - 0.056 14.0 0.0 1.6 9.3 0.0 2.7 2 2 0 2 2 2 0 XdhC Rossmann domain bPH_2 PF03703.14 gi|15678753|ref|NP_275869.1| - 4.5e-17 62.0 0.2 6.7e-17 61.4 0.2 1.3 1 0 0 1 1 1 1 Bacterial PH domain 7TM_GPCR_Srsx PF10320.9 gi|15678753|ref|NP_275869.1| - 0.031 13.7 1.0 0.044 13.2 1.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx AAA PF00004.29 gi|15678755|ref|NP_275871.1| - 2.4e-45 154.2 0.4 9.5e-45 152.3 0.0 2.2 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15678755|ref|NP_275871.1| - 3e-15 55.7 1.4 5.9e-15 54.8 1.4 1.5 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|15678755|ref|NP_275871.1| - 2.9e-14 52.8 0.0 6.8e-14 51.6 0.0 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 gi|15678755|ref|NP_275871.1| - 6.9e-08 32.8 0.0 2.3e-07 31.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|15678755|ref|NP_275871.1| - 1e-07 32.1 0.8 1.2e-06 28.6 0.1 2.9 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Prot_ATP_OB_N PF17758.1 gi|15678755|ref|NP_275871.1| - 1.3e-07 31.2 0.0 3.2e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain RuvB_N PF05496.12 gi|15678755|ref|NP_275871.1| - 1.8e-06 27.8 0.2 9e-06 25.5 0.0 2.2 2 1 1 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|15678755|ref|NP_275871.1| - 2.8e-06 27.8 0.0 9.5e-05 22.8 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|15678755|ref|NP_275871.1| - 5.9e-05 23.4 0.2 0.0018 18.6 0.2 2.6 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 gi|15678755|ref|NP_275871.1| - 8.7e-05 21.8 0.0 0.00015 21.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|15678755|ref|NP_275871.1| - 0.00033 20.9 0.0 0.00077 19.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|15678755|ref|NP_275871.1| - 0.00065 19.0 0.0 0.0013 18.0 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_14 PF13173.6 gi|15678755|ref|NP_275871.1| - 0.0011 19.0 0.0 0.0026 17.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|15678755|ref|NP_275871.1| - 0.0017 18.2 0.3 0.004 16.9 0.0 1.7 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 gi|15678755|ref|NP_275871.1| - 0.0025 18.0 0.0 0.0061 16.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15678755|ref|NP_275871.1| - 0.0043 17.6 0.2 0.013 16.0 0.0 2.0 2 0 0 2 2 1 1 AAA domain AAA_3 PF07726.11 gi|15678755|ref|NP_275871.1| - 0.0061 16.4 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|15678755|ref|NP_275871.1| - 0.0067 16.2 2.3 0.4 10.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 gi|15678755|ref|NP_275871.1| - 0.0071 15.7 0.1 0.019 14.4 0.1 1.7 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|15678755|ref|NP_275871.1| - 0.0072 16.7 0.0 0.017 15.5 0.0 1.7 1 0 0 1 1 1 1 RNA helicase Sigma54_activat PF00158.26 gi|15678755|ref|NP_275871.1| - 0.0083 15.8 0.0 0.079 12.7 0.0 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_24 PF13479.6 gi|15678755|ref|NP_275871.1| - 0.0087 15.8 1.8 0.03 14.0 0.2 2.5 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|15678755|ref|NP_275871.1| - 0.017 14.6 0.0 0.037 13.5 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region PhoH PF02562.16 gi|15678755|ref|NP_275871.1| - 0.033 13.6 0.3 0.11 11.9 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein Zeta_toxin PF06414.12 gi|15678755|ref|NP_275871.1| - 0.039 13.2 0.0 0.088 12.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin Parvo_NS1 PF01057.17 gi|15678755|ref|NP_275871.1| - 0.041 13.0 0.0 0.085 11.9 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 TsaE PF02367.17 gi|15678755|ref|NP_275871.1| - 0.048 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|15678755|ref|NP_275871.1| - 0.054 13.1 0.6 0.32 10.5 0.0 2.4 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 gi|15678755|ref|NP_275871.1| - 0.057 12.8 5.5 0.12 11.7 0.2 2.9 2 1 0 2 2 2 0 KaiC AAA_17 PF13207.6 gi|15678755|ref|NP_275871.1| - 0.063 13.7 2.2 0.16 12.4 0.1 2.8 2 1 0 2 2 2 0 AAA domain DUF2046 PF09755.9 gi|15678755|ref|NP_275871.1| - 0.087 12.0 7.1 0.14 11.4 7.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) ABC_tran PF00005.27 gi|15678755|ref|NP_275871.1| - 0.097 13.2 0.9 0.46 11.0 0.0 2.3 2 1 0 2 2 2 0 ABC transporter ATPase_2 PF01637.18 gi|15678755|ref|NP_275871.1| - 0.12 12.3 3.5 0.29 11.0 0.0 2.8 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|15678755|ref|NP_275871.1| - 0.12 12.2 0.1 0.43 10.5 0.0 1.9 1 1 1 2 2 2 0 NACHT domain TolA_bind_tri PF16331.5 gi|15678755|ref|NP_275871.1| - 0.13 12.3 3.4 2 8.6 0.1 2.9 2 1 1 3 3 3 0 TolA binding protein trimerisation Urb2 PF10441.9 gi|15678755|ref|NP_275871.1| - 0.21 11.5 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 Urb2/Npa2 family Fib_alpha PF08702.10 gi|15678755|ref|NP_275871.1| - 0.27 11.4 1.2 1.2 9.3 1.7 1.9 2 0 0 2 2 1 0 Fibrinogen alpha/beta chain family AAA_13 PF13166.6 gi|15678755|ref|NP_275871.1| - 0.35 9.5 1.6 17 3.8 1.5 2.3 2 0 0 2 2 2 0 AAA domain DUF1664 PF07889.12 gi|15678755|ref|NP_275871.1| - 0.48 10.5 4.1 0.49 10.4 2.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) CtIP_N PF10482.9 gi|15678755|ref|NP_275871.1| - 4.4 7.4 8.9 2.6 8.1 3.3 2.5 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain ZapB PF06005.12 gi|15678755|ref|NP_275871.1| - 6.3 7.3 14.4 2.2 8.8 8.6 2.9 3 0 0 3 3 3 0 Cell division protein ZapB HTH_3 PF01381.22 gi|15678756|ref|NP_275872.1| - 1.9e-11 43.8 1.8 1.9e-11 43.8 1.8 1.6 2 0 0 2 2 2 1 Helix-turn-helix HTH_25 PF13413.6 gi|15678756|ref|NP_275872.1| - 1.4e-05 24.9 2.9 0.00059 19.6 1.4 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_31 PF13560.6 gi|15678756|ref|NP_275872.1| - 2.6e-05 24.5 0.1 4.1e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|15678756|ref|NP_275872.1| - 0.0014 18.6 2.8 0.0023 17.9 2.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Plant_tran PF04827.14 gi|15678756|ref|NP_275872.1| - 0.0054 16.4 0.1 0.0076 15.9 0.1 1.1 1 0 0 1 1 1 1 Plant transposon protein DUF356 PF04009.12 gi|15678757|ref|NP_275873.1| - 7.9e-40 135.4 0.2 8.7e-40 135.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Rep_fac_C PF08542.11 gi|15678758|ref|NP_275874.1| - 0.0011 19.3 0.0 0.85 10.1 0.0 2.3 2 0 0 2 2 2 2 Replication factor C C-terminal domain SprB PF13573.6 gi|15678758|ref|NP_275874.1| - 0.12 12.1 1.9 0.52 10.1 0.0 2.3 2 0 0 2 2 2 0 SprB repeat Mur_ligase_M PF08245.12 gi|15679903|ref|NP_275877.1| - 1.6e-22 80.4 0.0 3.1e-22 79.5 0.0 1.5 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|15679903|ref|NP_275877.1| - 1.3e-07 31.8 0.1 1.2e-05 25.4 0.0 2.9 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain Glycos_transf_4 PF00953.21 gi|15678761|ref|NP_275878.1| - 2.8e-25 89.2 9.8 2.8e-25 89.2 9.8 3.1 3 1 1 4 4 4 3 Glycosyl transferase family 4 MraY_sig1 PF10555.9 gi|15678761|ref|NP_275878.1| - 0.00082 18.8 2.0 0.002 17.5 2.0 1.7 1 0 0 1 1 1 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ATP-grasp_3 PF02655.14 gi|15678762|ref|NP_275879.1| - 3.2e-16 59.8 0.0 6.9e-16 58.7 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|15678762|ref|NP_275879.1| - 3.7e-10 39.6 0.0 6e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 gi|15678762|ref|NP_275879.1| - 1e-09 38.2 0.0 5.7e-09 35.8 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 gi|15678762|ref|NP_275879.1| - 1e-07 31.7 0.0 1.3e-06 28.1 0.0 2.1 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|15678762|ref|NP_275879.1| - 1.5e-07 31.1 0.0 2.5e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|15678762|ref|NP_275879.1| - 1.6e-07 31.1 0.0 1.6e-06 27.9 0.0 2.1 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15678762|ref|NP_275879.1| - 1e-06 28.2 0.0 0.0018 17.6 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|15678762|ref|NP_275879.1| - 3.4e-05 23.5 0.0 0.00052 19.7 0.0 2.5 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|15678762|ref|NP_275879.1| - 0.00064 19.6 0.0 0.0014 18.4 0.0 1.6 1 1 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_YheCD PF14398.6 gi|15678762|ref|NP_275879.1| - 0.0022 17.3 0.0 0.052 12.8 0.0 2.1 2 0 0 2 2 2 1 YheC/D like ATP-grasp HycI PF01750.18 gi|15678763|ref|NP_275880.1| - 2.1e-32 111.7 0.0 2.5e-32 111.4 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Methyltransf_25 PF13649.6 gi|15678764|ref|NP_275881.1| - 2.1e-07 31.5 0.0 3.5e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|15678764|ref|NP_275881.1| - 3.4e-06 26.3 0.0 5.1e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|15678764|ref|NP_275881.1| - 4.6e-06 27.2 0.0 7.1e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15678764|ref|NP_275881.1| - 6.8e-05 22.7 0.0 9.2e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15678764|ref|NP_275881.1| - 0.00061 19.3 0.0 0.00079 18.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|15678764|ref|NP_275881.1| - 0.027 14.1 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MTS PF05175.14 gi|15678764|ref|NP_275881.1| - 0.049 13.2 0.0 0.081 12.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|15678764|ref|NP_275881.1| - 0.054 14.2 0.0 0.078 13.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|15678764|ref|NP_275881.1| - 0.16 11.7 0.0 0.37 10.5 0.0 1.6 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NikR_C PF08753.11 gi|15678765|ref|NP_275882.1| - 5e-31 106.7 6.7 7.6e-31 106.1 6.7 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|15678765|ref|NP_275882.1| - 2.8e-06 27.1 1.2 5.5e-06 26.1 0.1 1.9 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family Carbam_trans_C PF16861.5 gi|15678765|ref|NP_275882.1| - 0.029 14.0 0.1 0.036 13.7 0.1 1.2 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus HicB_lk_antitox PF15919.5 gi|15678765|ref|NP_275882.1| - 0.053 13.6 0.1 0.34 11.0 0.0 2.1 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system CBS PF00571.28 gi|15678766|ref|NP_275883.1| - 3.6e-30 104.2 4.9 3e-14 53.2 0.1 2.1 2 0 0 2 2 2 2 CBS domain Acetyltransf_1 PF00583.25 gi|15678766|ref|NP_275883.1| - 0.063 13.5 0.0 0.35 11.1 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15678766|ref|NP_275883.1| - 0.07 13.1 0.0 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain TrmB PF01978.19 gi|15678767|ref|NP_275884.1| - 7e-05 22.6 0.5 0.31 11.0 0.1 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB Cdc6_C PF09079.11 gi|15678767|ref|NP_275884.1| - 0.00053 19.9 0.7 0.76 9.8 0.1 2.7 3 0 0 3 3 3 2 CDC6, C terminal winged helix domain DUF2250 PF10007.9 gi|15678767|ref|NP_275884.1| - 0.0012 18.9 1.0 0.053 13.6 0.2 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_27 PF13463.6 gi|15678767|ref|NP_275884.1| - 0.0062 17.0 0.4 0.093 13.2 0.1 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain DprA_WH PF17782.1 gi|15678767|ref|NP_275884.1| - 0.051 13.7 0.1 0.82 9.8 0.0 2.4 3 0 0 3 3 3 0 DprA winged helix domain MarR PF01047.22 gi|15678767|ref|NP_275884.1| - 0.077 12.9 0.2 6.7 6.7 0.0 2.7 3 0 0 3 3 3 0 MarR family DED PF01335.21 gi|15678767|ref|NP_275884.1| - 0.086 13.2 0.6 2.1 8.7 0.0 2.7 3 0 0 3 3 3 0 Death effector domain tRNA-synt_2d PF01409.20 gi|15678768|ref|NP_275885.1| - 2e-95 318.9 0.0 2.7e-95 318.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|15678768|ref|NP_275885.1| - 2.7e-12 46.6 0.0 9.7e-11 41.5 0.0 2.2 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain DUF2582 PF10771.9 gi|15678768|ref|NP_275885.1| - 4.6e-05 23.5 0.7 0.00014 21.9 0.4 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix domain (DUF2582) tRNA-synt_2 PF00152.20 gi|15678768|ref|NP_275885.1| - 0.0015 17.7 0.3 0.23 10.5 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) MarR_2 PF12802.7 gi|15678768|ref|NP_275885.1| - 0.002 18.0 0.8 2.4 8.1 0.0 3.2 3 0 0 3 3 3 2 MarR family tRNA-synt_2b PF00587.25 gi|15678768|ref|NP_275885.1| - 0.0059 16.6 0.0 0.014 15.4 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) TrmB PF01978.19 gi|15678768|ref|NP_275885.1| - 0.01 15.7 2.0 0.2 11.5 0.1 3.1 4 0 0 4 4 4 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15678768|ref|NP_275885.1| - 0.013 15.4 0.0 0.37 10.7 0.0 3.2 4 0 0 4 4 4 0 MarR family PheRS_DBD3 PF18553.1 gi|15678768|ref|NP_275885.1| - 0.016 15.5 0.0 0.042 14.1 0.0 1.7 1 0 0 1 1 1 0 PheRS DNA binding domain 3 HTH_24 PF13412.6 gi|15678768|ref|NP_275885.1| - 0.026 14.1 1.1 13 5.4 0.0 3.2 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding AAA_assoc_C PF09821.9 gi|15678768|ref|NP_275885.1| - 0.12 12.9 0.7 3.8 8.1 0.1 2.4 2 0 0 2 2 2 0 C-terminal AAA-associated domain HTH_IclR PF09339.10 gi|15678768|ref|NP_275885.1| - 0.12 12.1 1.1 14 5.6 0.1 2.9 3 0 0 3 3 3 0 IclR helix-turn-helix domain CitG PF01874.16 gi|15678769|ref|NP_275886.1| - 3.2e-75 253.4 0.0 3.6e-75 253.2 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase ALAD PF00490.21 gi|15678770|ref|NP_275887.1| - 6.7e-140 465.7 0.1 7.5e-140 465.6 0.1 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Fer4 PF00037.27 gi|15678771|ref|NP_275888.1| - 3.1e-12 45.8 9.9 7.4e-06 25.6 1.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678771|ref|NP_275888.1| - 4e-08 33.0 10.0 0.00025 21.0 1.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678771|ref|NP_275888.1| - 1.8e-06 28.5 10.8 1.8e-06 28.5 10.8 2.6 1 1 2 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678771|ref|NP_275888.1| - 7.3e-06 26.0 22.7 0.0001 22.3 12.5 2.6 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678771|ref|NP_275888.1| - 4.9e-05 23.4 12.5 4.9e-05 23.4 12.5 2.7 1 1 2 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678771|ref|NP_275888.1| - 0.00022 22.1 19.1 0.0081 17.1 2.1 3.3 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15678771|ref|NP_275888.1| - 0.00073 19.6 19.5 0.0022 18.1 10.3 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678771|ref|NP_275888.1| - 0.012 16.1 1.6 0.012 16.1 1.6 3.3 2 2 2 4 4 4 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15678771|ref|NP_275888.1| - 0.052 14.5 4.1 0.052 14.5 4.1 3.6 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678771|ref|NP_275888.1| - 0.073 13.6 3.0 0.073 13.6 3.0 3.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain CitX PF03802.14 gi|15678771|ref|NP_275888.1| - 0.7 9.6 8.0 0.17 11.6 2.0 2.2 2 0 0 2 2 2 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HhH-GPD PF00730.25 gi|15678772|ref|NP_275889.1| - 1.7e-20 73.5 0.0 2.3e-20 73.1 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|15678772|ref|NP_275889.1| - 7.3e-07 28.8 0.0 1.3e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif RanGAP1_C PF07834.11 gi|15678772|ref|NP_275889.1| - 0.0058 16.3 0.0 0.0081 15.8 0.0 1.2 1 0 0 1 1 1 1 RanGAP1 C-terminal domain DUF1107 PF06526.12 gi|15678772|ref|NP_275889.1| - 0.027 14.4 0.1 0.099 12.6 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) HHH_2 PF12826.7 gi|15678772|ref|NP_275889.1| - 0.062 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15678772|ref|NP_275889.1| - 0.11 13.2 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix domain Adenine_glyco PF03352.13 gi|15678772|ref|NP_275889.1| - 0.16 11.7 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 Methyladenine glycosylase AIM24 PF01987.17 gi|15678773|ref|NP_275890.1| - 7.4e-59 198.9 0.5 8.3e-59 198.8 0.5 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 PHA_gran_rgn PF09650.10 gi|15678773|ref|NP_275890.1| - 0.11 12.8 0.0 1.6 9.1 0.0 2.2 2 0 0 2 2 2 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) Chorismate_synt PF01264.21 gi|15678774|ref|NP_275891.1| - 5.7e-137 455.8 0.9 6.4e-137 455.6 0.9 1.0 1 0 0 1 1 1 1 Chorismate synthase ThrE PF06738.12 gi|15678775|ref|NP_275892.1| - 4.2e-42 144.2 26.3 1.1e-41 142.8 5.8 2.1 2 0 0 2 2 2 2 Putative threonine/serine exporter ThrE_2 PF12821.7 gi|15678775|ref|NP_275892.1| - 6.7e-05 23.0 27.9 0.015 15.4 10.2 2.2 2 0 0 2 2 2 2 Threonine/Serine exporter, ThrE Lactamase_B_2 PF12706.7 gi|15678776|ref|NP_275893.1| - 5.5e-26 91.3 0.6 6.6e-26 91.1 0.6 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15678776|ref|NP_275893.1| - 2.3e-12 47.1 0.0 3.4e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15678776|ref|NP_275893.1| - 2.1e-05 24.6 3.1 4.7e-05 23.5 0.2 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily DUF2121 PF09894.9 gi|15678777|ref|NP_275894.1| - 9.2e-82 273.3 1.8 1.3e-81 272.8 1.8 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) DUF2139 PF09910.9 gi|15678777|ref|NP_275894.1| - 0.04 13.1 0.1 0.1 11.8 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2139) Thioredox_DsbH PF03190.15 gi|15678778|ref|NP_275895.1| - 8.5e-76 253.4 0.0 1.2e-75 253.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|15678778|ref|NP_275895.1| - 3e-11 43.3 0.0 8.1e-11 42.0 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|15678778|ref|NP_275895.1| - 0.015 15.8 0.0 0.026 15.0 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain TPR_14 PF13428.6 gi|15678779|ref|NP_275896.1| - 0.1 13.5 1.6 2 9.5 0.0 3.2 4 0 0 4 4 4 0 Tetratricopeptide repeat E1-E2_ATPase PF00122.20 gi|15678780|ref|NP_275897.1| - 1.5e-51 174.5 0.3 1.5e-51 174.5 0.3 2.0 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|15678780|ref|NP_275897.1| - 1.8e-38 132.9 0.0 3.5e-38 132.0 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15678780|ref|NP_275897.1| - 0.00016 21.5 0.0 0.00046 20.0 0.1 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15678780|ref|NP_275897.1| - 0.00044 20.7 0.1 0.0016 18.9 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF2157 PF09925.9 gi|15678780|ref|NP_275897.1| - 0.008 16.0 0.8 0.008 16.0 0.8 2.4 2 0 0 2 2 2 1 Predicted membrane protein (DUF2157) Rubrerythrin PF02915.17 gi|15678781|ref|NP_275898.1| - 6.3e-42 143.2 8.8 7.5e-42 143.0 8.8 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|15678781|ref|NP_275898.1| - 2.8e-12 46.8 3.4 3.6e-12 46.4 3.4 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.12 gi|15678781|ref|NP_275898.1| - 0.00038 20.5 2.4 0.45 10.5 1.2 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF892) FTA4 PF13093.6 gi|15678781|ref|NP_275898.1| - 0.0014 18.6 0.3 0.0017 18.3 0.3 1.1 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 HypA PF01155.19 gi|15678781|ref|NP_275898.1| - 0.0042 17.1 0.5 0.0086 16.1 0.5 1.6 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FA_desaturase_2 PF03405.14 gi|15678781|ref|NP_275898.1| - 0.016 14.1 0.2 0.37 9.6 0.1 2.0 2 0 0 2 2 2 0 Fatty acid desaturase Arfaptin PF06456.13 gi|15678781|ref|NP_275898.1| - 0.059 12.9 0.3 0.68 9.5 0.1 2.0 2 0 0 2 2 2 0 Arfaptin-like domain RNA_POL_M_15KD PF02150.16 gi|15678781|ref|NP_275898.1| - 0.24 11.3 0.2 0.24 11.3 0.2 2.0 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit HalOD2 PF18547.1 gi|15678781|ref|NP_275898.1| - 0.41 10.6 0.1 0.41 10.6 0.1 2.2 1 1 1 2 2 2 0 Halobacterial output domain 2 zf-ribbon_3 PF13248.6 gi|15678781|ref|NP_275898.1| - 4.9 6.7 6.5 11 5.6 1.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|15678781|ref|NP_275898.1| - 7.3 6.4 7.7 2.3 8.0 0.5 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain Desulfoferrodox PF01880.18 gi|15678782|ref|NP_275899.1| - 1.3e-21 76.9 0.1 1.9e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 Desulfoferrodoxin Desulfoferrod_N PF06397.12 gi|15678782|ref|NP_275899.1| - 1.8e-21 75.5 3.3 3.8e-21 74.4 3.3 1.6 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain Glyoxalase PF00903.25 gi|15678783|ref|NP_275900.1| - 1.7e-14 54.1 0.0 4.3e-14 52.8 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|15678783|ref|NP_275900.1| - 8e-08 32.5 0.0 2.2e-07 31.1 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|15678783|ref|NP_275900.1| - 3.1e-07 31.1 0.0 3.6e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 gi|15678783|ref|NP_275900.1| - 2.1e-06 27.7 0.0 2.6e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|15678783|ref|NP_275900.1| - 0.12 12.5 0.0 6.7 6.8 0.0 2.0 1 1 1 2 2 2 0 Glyoxalase-like domain LPAM_1 PF08139.12 gi|15678784|ref|NP_275901.1| - 0.012 16.0 0.3 0.02 15.3 0.3 1.4 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site F_actin_bind PF08919.10 gi|15678784|ref|NP_275901.1| - 0.027 14.6 0.2 0.094 12.8 0.0 1.9 2 1 0 2 2 2 0 F-actin binding Na_H_Exchanger PF00999.21 gi|15678785|ref|NP_275902.1| - 9.8e-53 179.3 45.8 1.2e-52 179.0 45.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MFS_1 PF07690.16 gi|15678786|ref|NP_275903.1| - 1.7e-19 70.0 51.8 2.6e-09 36.5 21.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|15678786|ref|NP_275903.1| - 0.057 12.3 15.8 0.015 14.2 1.9 2.7 2 1 1 3 3 3 0 MFS_1 like family DUF716 PF04819.12 gi|15678786|ref|NP_275903.1| - 0.53 9.9 4.2 0.16 11.6 0.6 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF716) Prenyltrans PF00432.21 gi|15678787|ref|NP_275904.1| - 2.3e-09 36.9 0.0 0.0011 18.6 0.0 3.6 4 0 0 4 4 4 2 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 gi|15678787|ref|NP_275904.1| - 0.0069 15.5 0.0 0.031 13.4 0.0 2.1 2 1 1 3 3 3 1 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 gi|15678787|ref|NP_275904.1| - 0.014 14.5 0.0 0.39 9.8 0.0 2.5 3 0 0 3 3 3 0 Squalene-hopene cyclase N-terminal domain tRNA_anti-codon PF01336.25 gi|15678788|ref|NP_275905.1| - 1.1e-08 34.9 0.2 3.2e-08 33.4 0.2 1.9 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DnaJ_CXXCXGXG PF00684.19 gi|15678788|ref|NP_275905.1| - 2.8e-08 34.0 23.5 0.00028 21.2 1.9 2.5 2 0 0 2 2 2 2 DnaJ central domain DHH PF01368.20 gi|15678788|ref|NP_275905.1| - 0.00015 21.9 0.1 0.00033 20.9 0.1 1.6 1 0 0 1 1 1 1 DHH family S1 PF00575.23 gi|15678788|ref|NP_275905.1| - 0.00021 21.6 0.2 0.0039 17.5 0.0 2.5 2 0 0 2 2 2 1 S1 RNA binding domain Rep_fac-A_3 PF08661.11 gi|15678788|ref|NP_275905.1| - 0.00084 19.7 0.2 0.0025 18.1 0.2 1.7 1 0 0 1 1 1 1 Replication factor A protein 3 DZR PF12773.7 gi|15678788|ref|NP_275905.1| - 0.007 16.4 9.1 0.007 16.4 9.1 2.4 1 1 1 2 2 2 1 Double zinc ribbon Cript PF10235.9 gi|15678788|ref|NP_275905.1| - 0.021 15.4 1.0 0.021 15.4 1.0 2.5 1 1 1 2 2 2 0 Microtubule-associated protein CRIPT tRNA_anti_2 PF13742.6 gi|15678788|ref|NP_275905.1| - 0.037 14.2 0.0 0.12 12.6 0.0 1.9 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain DUF4145 PF13643.6 gi|15678788|ref|NP_275905.1| - 0.092 12.9 0.9 0.38 10.9 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4145) CDC24_OB3 PF17244.2 gi|15678788|ref|NP_275905.1| - 0.13 11.9 0.1 0.13 11.9 0.1 1.6 2 0 0 2 2 1 0 Cell division control protein 24, OB domain 3 TerY_C PF15616.6 gi|15678788|ref|NP_275905.1| - 0.64 10.1 8.4 1.3 9.2 8.4 1.5 1 0 0 1 1 1 0 TerY-C metal binding domain PolC_DP2 PF03833.13 gi|15678788|ref|NP_275905.1| - 0.98 7.2 9.7 0.31 8.9 7.2 1.3 1 1 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 gi|15678788|ref|NP_275905.1| - 1.1 9.3 19.0 2.9 7.9 3.6 3.3 2 1 1 3 3 3 0 zinc-ribbons HypA PF01155.19 gi|15678788|ref|NP_275905.1| - 6.5 6.8 20.6 1.6 8.8 2.1 3.5 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_15 PF17032.5 gi|15678788|ref|NP_275905.1| - 8.6 7.2 17.8 3.5e+02 2.0 17.8 2.6 1 1 0 1 1 1 0 zinc-ribbon family TackOD1 PF18551.1 gi|15678788|ref|NP_275905.1| - 9.5 5.8 19.4 6.2 6.5 5.6 3.4 1 1 2 3 3 3 0 Thaumarchaeal output domain 1 HhH-GPD PF00730.25 gi|15678789|ref|NP_275906.1| - 2e-27 95.8 0.0 2.6e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|15678789|ref|NP_275906.1| - 3.5e-10 39.2 0.0 8.3e-10 38.0 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15678789|ref|NP_275906.1| - 0.0033 18.0 0.1 0.08 13.6 0.1 2.7 1 1 0 1 1 1 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|15678789|ref|NP_275906.1| - 0.022 15.1 1.8 0.022 15.1 1.8 1.6 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III HHH_2 PF12826.7 gi|15678789|ref|NP_275906.1| - 0.027 14.6 0.0 10 6.3 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF2400 PF09674.10 gi|15678789|ref|NP_275906.1| - 0.05 13.6 0.0 0.092 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) GTP_EFTU PF00009.27 gi|15678790|ref|NP_275907.1| - 2e-15 56.9 0.7 8.1e-11 41.8 0.1 2.3 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|15678790|ref|NP_275907.1| - 1.4e-10 40.9 0.1 3.6e-09 36.3 0.1 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 gi|15678790|ref|NP_275907.1| - 2.4e-09 37.3 0.1 3e-09 37.0 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 gi|15678790|ref|NP_275907.1| - 2.4e-08 33.8 0.1 3e-08 33.5 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 gi|15678790|ref|NP_275907.1| - 2.1e-07 31.2 0.0 2.8e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 gi|15678790|ref|NP_275907.1| - 2.6e-06 27.1 0.2 0.00016 21.3 0.2 2.7 1 1 0 1 1 1 1 Ferrous iron transport protein B SRPRB PF09439.10 gi|15678790|ref|NP_275907.1| - 1.9e-05 24.2 0.1 3.3e-05 23.4 0.1 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit UvrB_inter PF17757.1 gi|15678790|ref|NP_275907.1| - 0.021 15.0 0.0 0.036 14.2 0.0 1.5 1 1 0 1 1 1 0 UvrB interaction domain AAA_7 PF12775.7 gi|15678790|ref|NP_275907.1| - 0.043 13.3 0.0 0.51 9.8 0.1 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_28 PF13521.6 gi|15678790|ref|NP_275907.1| - 0.044 14.0 0.0 0.054 13.7 0.0 1.3 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|15678790|ref|NP_275907.1| - 0.07 12.8 0.0 6.9 6.3 0.0 2.1 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 gi|15678790|ref|NP_275907.1| - 0.074 12.8 0.1 0.082 12.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain EPSP_synthase PF00275.20 gi|15678791|ref|NP_275908.1| - 1.7e-136 455.2 0.0 2e-136 455.0 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) tRNA-synt_1 PF00133.22 gi|15678792|ref|NP_275909.1| - 2.7e-152 508.1 0.1 4.4e-151 504.1 0.1 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|15678792|ref|NP_275909.1| - 1.4e-41 142.0 0.0 2.7e-41 141.0 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|15678792|ref|NP_275909.1| - 2.5e-26 92.3 1.2 5.4e-15 55.0 0.0 4.1 4 0 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|15678792|ref|NP_275909.1| - 1.6e-06 27.7 0.0 0.022 14.1 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|15678792|ref|NP_275909.1| - 2.6e-05 23.8 0.0 0.18 11.3 0.0 2.5 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|15678792|ref|NP_275909.1| - 0.0004 19.4 0.0 0.0046 15.9 0.0 2.4 2 0 0 2 2 2 1 tRNA synthetases class I (K) Secapin PF17521.2 gi|15678792|ref|NP_275909.1| - 0.035 13.9 0.5 0.13 12.1 0.5 1.9 1 0 0 1 1 1 0 Honey bee peptides BLM10_mid PF16507.5 gi|15678792|ref|NP_275909.1| - 0.17 10.5 0.7 0.26 9.9 0.0 1.5 2 0 0 2 2 2 0 Proteasome-substrate-size regulator, mid region tRNA_synthFbeta PF17759.1 gi|161484930|ref|NP_275912.2| - 2.1e-43 148.3 0.1 2.9e-43 147.8 0.1 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|161484930|ref|NP_275912.2| - 6.2e-16 58.5 2.4 7e-12 45.5 0.6 2.7 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.17 gi|161484930|ref|NP_275912.2| - 1.2e-13 51.1 0.1 2.6e-13 50.0 0.0 1.6 2 0 0 2 2 2 1 B3/4 domain PhetRS_B1 PF18262.1 gi|161484930|ref|NP_275912.2| - 1.6e-06 28.2 0.6 0.00013 22.1 0.1 3.0 2 1 0 2 2 2 1 Phe-tRNA synthetase beta subunit B1 domain UPF0047 PF01894.17 gi|15678796|ref|NP_275913.1| - 8.7e-38 129.0 0.0 1.3e-37 128.4 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF362 PF04015.12 gi|15678797|ref|NP_275914.1| - 8.6e-47 160.0 0.0 1.2e-46 159.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|15678797|ref|NP_275914.1| - 1.5e-12 46.7 16.1 1.6e-06 27.6 4.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678797|ref|NP_275914.1| - 8.2e-10 39.1 6.7 6.4e-05 23.5 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678797|ref|NP_275914.1| - 4.2e-08 32.9 18.5 0.00069 19.6 4.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678797|ref|NP_275914.1| - 4.4e-08 32.7 19.2 0.00031 20.7 5.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678797|ref|NP_275914.1| - 1.4e-06 28.3 16.3 4.7e-06 26.6 16.4 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678797|ref|NP_275914.1| - 6.3e-05 23.3 6.8 0.1 13.0 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678797|ref|NP_275914.1| - 0.00022 22.1 15.2 0.0089 16.9 4.8 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15678797|ref|NP_275914.1| - 0.00026 21.1 14.5 0.0006 19.9 14.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678797|ref|NP_275914.1| - 0.0003 21.3 10.0 0.16 12.5 4.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678797|ref|NP_275914.1| - 0.0012 18.9 15.5 0.0038 17.3 15.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678797|ref|NP_275914.1| - 0.0029 18.0 16.2 0.075 13.6 5.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678797|ref|NP_275914.1| - 0.14 12.8 13.4 0.89 10.2 1.7 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I ComA PF02679.15 gi|15678797|ref|NP_275914.1| - 0.22 11.0 0.0 0.33 10.4 0.0 1.2 1 0 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) Fer4_15 PF13459.6 gi|15678797|ref|NP_275914.1| - 0.79 10.5 9.8 1.8 9.3 0.9 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|15678797|ref|NP_275914.1| - 1.9 9.6 24.1 1.9 9.6 5.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15678797|ref|NP_275914.1| - 5.4 7.2 12.9 18 5.6 13.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain MCH PF02289.16 gi|15678798|ref|NP_275915.1| - 1.5e-130 435.1 0.0 1.7e-130 434.9 0.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Thymidylat_synt PF00303.19 gi|15678799|ref|NP_275916.1| - 2.4e-16 59.7 0.0 4.1e-15 55.6 0.0 1.9 2 0 0 2 2 2 2 Thymidylate synthase Meth_synt_2 PF01717.18 gi|15678800|ref|NP_275917.1| - 2.9e-101 339.0 0.0 3.2e-101 338.8 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|15678800|ref|NP_275917.1| - 5e-07 29.5 0.0 6.7e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.17 gi|15678800|ref|NP_275917.1| - 0.005 16.0 0.0 0.012 14.8 0.0 1.6 1 1 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF1894 PF08979.11 gi|15678801|ref|NP_275918.1| - 4.1e-34 116.8 0.3 4.7e-34 116.6 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.11 gi|15678802|ref|NP_275919.1| - 1.4e-53 181.0 0.0 1.6e-53 180.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) Ctr PF04145.15 gi|15678803|ref|NP_275920.1| - 3.3 8.3 7.0 1.8 9.2 3.4 2.2 2 0 0 2 2 2 0 Ctr copper transporter family Acetyltransf_1 PF00583.25 gi|15678804|ref|NP_275921.1| - 1.8e-18 66.9 0.0 2.3e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|15678804|ref|NP_275921.1| - 1.1e-13 51.3 0.0 1.8e-13 50.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|15678804|ref|NP_275921.1| - 7.9e-13 48.5 0.0 1e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15678804|ref|NP_275921.1| - 5.9e-06 26.2 0.0 9.6e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|15678804|ref|NP_275921.1| - 2.7e-05 24.3 0.0 0.00024 21.2 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15678804|ref|NP_275921.1| - 0.00064 20.4 0.0 0.00082 20.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15678804|ref|NP_275921.1| - 0.0069 16.1 0.0 0.0093 15.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Lipase PF00151.19 gi|15678804|ref|NP_275921.1| - 0.03 13.6 0.0 0.037 13.3 0.0 1.1 1 0 0 1 1 1 0 Lipase Acetyltransf_CG PF14542.6 gi|15678804|ref|NP_275921.1| - 0.035 14.2 0.0 0.077 13.1 0.0 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF354 PF04007.12 gi|15678805|ref|NP_275922.1| - 4.8e-203 673.6 0.5 5.4e-203 673.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.19 gi|15678805|ref|NP_275922.1| - 1.7e-05 23.8 0.0 2.6e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase LpxB PF02684.15 gi|15678805|ref|NP_275922.1| - 0.0019 17.1 0.0 0.003 16.5 0.0 1.2 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase cobW PF02492.19 gi|15678806|ref|NP_275923.1| - 4.6e-29 101.2 0.4 6e-29 100.9 0.4 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|15678806|ref|NP_275923.1| - 4.3e-13 48.8 1.7 5.5e-07 28.8 1.7 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 gi|15678806|ref|NP_275923.1| - 9.7e-07 28.8 0.0 0.042 13.7 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|15678806|ref|NP_275923.1| - 2.2e-05 24.1 0.9 0.055 13.0 0.3 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain ATP_bind_1 PF03029.17 gi|15678806|ref|NP_275923.1| - 0.00015 21.6 0.1 0.18 11.5 0.0 2.1 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein Arf PF00025.21 gi|15678806|ref|NP_275923.1| - 0.0012 18.3 0.1 0.18 11.2 0.0 2.2 2 0 0 2 2 2 1 ADP-ribosylation factor family MobB PF03205.14 gi|15678806|ref|NP_275923.1| - 0.0025 17.7 0.0 0.0078 16.1 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 gi|15678806|ref|NP_275923.1| - 0.0039 17.6 0.3 0.014 15.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain IMPDH PF00478.25 gi|15678806|ref|NP_275923.1| - 0.005 15.9 2.2 0.12 11.4 0.6 2.0 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain FeoB_N PF02421.18 gi|15678806|ref|NP_275923.1| - 0.0073 15.8 0.4 1.4 8.5 0.2 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B SRP54 PF00448.22 gi|15678806|ref|NP_275923.1| - 0.0098 15.5 0.3 0.025 14.2 0.0 1.8 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|15678806|ref|NP_275923.1| - 0.012 15.6 0.4 0.022 14.6 0.0 1.7 2 0 0 2 2 2 0 NTPase TsaE PF02367.17 gi|15678806|ref|NP_275923.1| - 0.014 15.4 0.0 0.032 14.2 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|15678806|ref|NP_275923.1| - 0.021 14.1 0.0 0.038 13.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 gi|15678806|ref|NP_275923.1| - 0.029 14.5 0.0 0.06 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|15678806|ref|NP_275923.1| - 0.045 14.2 0.1 0.35 11.3 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|15678806|ref|NP_275923.1| - 0.05 13.3 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain KAP_NTPase PF07693.14 gi|15678806|ref|NP_275923.1| - 0.06 12.6 0.0 0.06 12.6 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain AAA_16 PF13191.6 gi|15678806|ref|NP_275923.1| - 0.064 13.6 0.0 0.1 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 gi|15678806|ref|NP_275923.1| - 0.068 12.1 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATPase_2 PF01637.18 gi|15678806|ref|NP_275923.1| - 0.076 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|15678806|ref|NP_275923.1| - 0.094 13.3 0.1 0.21 12.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15678806|ref|NP_275923.1| - 0.11 12.8 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AcetDehyd-dimer PF09290.11 gi|15678806|ref|NP_275923.1| - 0.12 12.5 0.1 0.25 11.5 0.0 1.5 2 0 0 2 2 1 0 Prokaryotic acetaldehyde dehydrogenase, dimerisation AAA_7 PF12775.7 gi|15678806|ref|NP_275923.1| - 0.14 11.7 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region HypA PF01155.19 gi|15678807|ref|NP_275924.1| - 1.8e-28 98.8 1.2 2.1e-28 98.6 1.2 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Anti-TRAP PF15777.5 gi|15678807|ref|NP_275924.1| - 0.15 12.0 1.1 0.25 11.4 1.1 1.3 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Pribosyltran_N PF13793.6 gi|15678808|ref|NP_275925.1| - 1.1e-31 109.2 0.0 4.4e-30 104.0 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|15678808|ref|NP_275925.1| - 9.8e-19 67.4 2.7 1.7e-18 66.6 0.9 2.3 3 1 1 4 4 4 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|15678808|ref|NP_275925.1| - 3.9e-09 36.8 1.6 3.9e-09 36.8 1.6 1.7 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|15678808|ref|NP_275925.1| - 0.0065 15.9 0.2 0.011 15.2 0.2 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Lon_C PF05362.13 gi|15678809|ref|NP_275926.1| - 1.5e-31 109.5 3.2 2.5e-31 108.8 3.2 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|15678809|ref|NP_275926.1| - 1.9e-31 109.5 0.0 3.2e-22 79.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|15678809|ref|NP_275926.1| - 3.3e-18 65.9 0.0 1.4e-09 37.9 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|15678809|ref|NP_275926.1| - 6e-15 55.2 0.0 1.2e-09 37.9 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|15678809|ref|NP_275926.1| - 2.7e-12 46.9 0.0 8.6e-05 22.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|15678809|ref|NP_275926.1| - 2.9e-10 39.6 0.1 0.00024 20.3 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain ChlI PF13541.6 gi|15678809|ref|NP_275926.1| - 2.9e-09 36.8 0.2 7.4e-09 35.5 0.2 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Sigma54_activ_2 PF14532.6 gi|15678809|ref|NP_275926.1| - 1.3e-08 35.1 0.0 0.0046 17.1 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA PF00004.29 gi|15678809|ref|NP_275926.1| - 6.2e-07 29.9 0.0 0.0041 17.5 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|15678809|ref|NP_275926.1| - 6.3e-06 26.0 0.0 0.024 14.4 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_3 PF07726.11 gi|15678809|ref|NP_275926.1| - 8.2e-06 25.7 0.1 0.026 14.4 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15678809|ref|NP_275926.1| - 8.4e-06 26.1 0.0 0.00014 22.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|15678809|ref|NP_275926.1| - 0.00011 22.0 0.0 0.0017 18.1 0.0 2.3 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_7 PF12775.7 gi|15678809|ref|NP_275926.1| - 0.00011 21.7 0.1 0.0018 17.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|15678809|ref|NP_275926.1| - 0.00012 22.5 0.0 0.00034 21.1 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|15678809|ref|NP_275926.1| - 0.00019 21.2 0.0 0.074 12.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|15678809|ref|NP_275926.1| - 0.00034 20.6 0.0 0.73 9.7 0.0 2.7 2 0 0 2 2 2 2 NTPase AAA_PrkA PF08298.11 gi|15678809|ref|NP_275926.1| - 0.00035 19.6 0.2 0.25 10.2 0.1 2.4 2 0 0 2 2 2 2 PrkA AAA domain AAA_19 PF13245.6 gi|15678809|ref|NP_275926.1| - 0.0015 18.8 0.1 0.19 12.1 0.1 2.8 1 1 0 1 1 1 1 AAA domain MCM_lid PF17855.1 gi|15678809|ref|NP_275926.1| - 0.0031 17.9 0.2 0.0073 16.7 0.2 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain NACHT PF05729.12 gi|15678809|ref|NP_275926.1| - 0.0041 17.0 0.0 0.012 15.5 0.0 1.8 1 0 0 1 1 1 1 NACHT domain AAA_2 PF07724.14 gi|15678809|ref|NP_275926.1| - 0.0058 16.8 0.0 3 7.9 0.0 3.0 3 0 0 3 3 2 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 gi|15678809|ref|NP_275926.1| - 0.0092 15.2 0.0 0.02 14.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) TniB PF05621.11 gi|15678809|ref|NP_275926.1| - 0.013 15.0 0.0 0.15 11.4 0.0 2.6 2 1 0 2 2 2 0 Bacterial TniB protein PhoH PF02562.16 gi|15678809|ref|NP_275926.1| - 0.016 14.7 0.0 0.047 13.1 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein AAA_18 PF13238.6 gi|15678809|ref|NP_275926.1| - 0.017 15.7 0.0 0.14 12.7 0.0 2.4 3 0 0 3 3 2 0 AAA domain RsgA_GTPase PF03193.16 gi|15678809|ref|NP_275926.1| - 0.019 14.9 0.0 0.078 12.9 0.0 2.0 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|15678809|ref|NP_275926.1| - 0.02 15.4 0.0 0.062 13.8 0.0 1.9 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 gi|15678809|ref|NP_275926.1| - 0.027 14.2 0.0 0.081 12.7 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain Parvo_NS1 PF01057.17 gi|15678809|ref|NP_275926.1| - 0.036 13.2 0.0 0.074 12.1 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_10 PF12846.7 gi|15678809|ref|NP_275926.1| - 0.052 12.5 0.0 0.1 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain AAA_24 PF13479.6 gi|15678809|ref|NP_275926.1| - 0.057 13.1 0.0 0.19 11.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain EMC3_TMCO1 PF01956.16 gi|15678809|ref|NP_275926.1| - 0.11 12.2 1.5 0.3 10.8 1.5 1.7 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like RNA_helicase PF00910.22 gi|15678809|ref|NP_275926.1| - 0.12 12.8 0.0 0.49 10.8 0.0 2.0 2 0 0 2 2 1 0 RNA helicase ResIII PF04851.15 gi|15678809|ref|NP_275926.1| - 0.13 12.3 0.0 0.3 11.1 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DUF1676 PF07898.13 gi|15678809|ref|NP_275926.1| - 0.86 9.6 3.7 1.2 9.2 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1676) PAS_9 PF13426.7 gi|15678810|ref|NP_275927.1| - 2.2e-50 169.2 0.3 5.2e-19 68.4 0.0 3.1 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|15678810|ref|NP_275927.1| - 6.8e-50 167.8 0.1 9.4e-19 67.5 0.0 3.1 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|15678810|ref|NP_275927.1| - 1.4e-42 144.4 0.0 2.6e-16 59.8 0.0 3.1 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.12 gi|15678810|ref|NP_275927.1| - 1e-26 93.0 0.0 1.5e-11 44.4 0.0 3.3 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|15678810|ref|NP_275927.1| - 5.4e-25 86.9 0.1 4.6e-07 29.7 0.0 3.4 3 0 0 3 3 3 3 PAS domain MEKHLA PF08670.11 gi|15678810|ref|NP_275927.1| - 2.3e-06 27.6 0.0 0.0008 19.3 0.0 2.4 1 1 1 2 2 2 2 MEKHLA domain PAS_10 PF13596.6 gi|15678810|ref|NP_275927.1| - 2.7e-05 24.7 0.0 0.0035 17.9 0.0 3.4 2 1 2 4 4 4 1 PAS domain PAS_11 PF14598.6 gi|15678810|ref|NP_275927.1| - 3.3e-05 24.0 0.0 0.15 12.2 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.7 gi|15678810|ref|NP_275927.1| - 0.00051 20.2 1.1 13 6.0 0.0 4.9 4 2 2 6 6 6 1 PAS fold dCache_1 PF02743.18 gi|15678810|ref|NP_275927.1| - 0.002 18.0 0.0 4.5 7.0 0.0 3.1 2 1 0 3 3 3 2 Cache domain GATase_3 PF07685.14 gi|15678811|ref|NP_275928.1| - 2.2e-58 197.1 0.0 3.7e-58 196.3 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|15678811|ref|NP_275928.1| - 2.9e-23 82.3 0.0 5.3e-23 81.5 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|15678811|ref|NP_275928.1| - 1.6e-22 80.3 0.0 1.3e-21 77.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain SNO PF01174.19 gi|15678811|ref|NP_275928.1| - 0.00014 21.8 0.0 0.00026 20.9 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family DUF1611 PF07755.11 gi|15678811|ref|NP_275928.1| - 0.00077 18.8 0.1 0.028 13.7 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_C) P-loop domain GATase PF00117.28 gi|15678811|ref|NP_275928.1| - 0.00097 18.9 0.0 0.0026 17.6 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15678811|ref|NP_275928.1| - 0.051 13.3 0.2 0.19 11.5 0.2 1.9 1 1 0 1 1 1 0 Peptidase C26 MobB PF03205.14 gi|15678811|ref|NP_275928.1| - 0.071 13.0 0.1 0.48 10.3 0.0 2.4 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B Na_sulph_symp PF00939.19 gi|15678812|ref|NP_275929.1| - 9.8e-62 209.5 38.1 1.1e-61 209.4 38.1 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 gi|15678812|ref|NP_275929.1| - 3.4e-34 118.4 51.6 3.7e-20 72.3 16.6 2.1 1 1 1 2 2 2 2 Citrate transporter DUF1624 PF07786.12 gi|15678813|ref|NP_275930.1| - 2e-67 227.0 15.1 2.3e-67 226.8 15.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 gi|15678813|ref|NP_275930.1| - 1.7e-07 30.7 23.9 0.00047 19.3 8.1 2.2 1 1 1 2 2 2 2 Acyltransferase family DUF3040 PF11239.8 gi|15678813|ref|NP_275930.1| - 9.6 6.6 9.9 3.2 8.1 0.5 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) ACP_syn_III_C PF08541.10 gi|15678814|ref|NP_275931.1| - 1.6e-10 41.0 0.0 3.5e-10 39.9 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_N PF01154.17 gi|15678814|ref|NP_275931.1| - 1.6e-05 24.8 0.1 2.3e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMG_CoA_synt_C PF08540.10 gi|15678814|ref|NP_275931.1| - 1.7e-05 24.6 0.0 0.033 13.8 0.0 2.1 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|15678814|ref|NP_275931.1| - 2.5e-05 23.8 0.2 4.2e-05 23.1 0.2 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Phosphatase PF15698.5 gi|15678814|ref|NP_275931.1| - 0.02 14.0 0.0 0.032 13.4 0.0 1.2 1 0 0 1 1 1 0 Phosphatase ACP_syn_III PF08545.10 gi|15678814|ref|NP_275931.1| - 0.2 11.5 3.8 0.096 12.6 1.2 1.8 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 gi|15678815|ref|NP_275932.1| - 1.2e-30 106.8 0.5 1.9e-30 106.1 0.5 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15678815|ref|NP_275932.1| - 3.5e-11 42.8 2.1 1.3e-10 41.0 1.1 2.5 2 1 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|15678815|ref|NP_275932.1| - 4.3e-05 23.2 2.6 4.3e-05 23.2 2.6 2.5 2 2 2 4 4 4 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|15678815|ref|NP_275932.1| - 0.00094 19.2 0.2 0.4 10.7 0.0 2.7 2 0 0 2 2 2 2 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|15678815|ref|NP_275932.1| - 0.0046 16.8 0.3 0.48 10.3 0.1 2.5 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CvfB_WH PF17783.1 gi|15678815|ref|NP_275932.1| - 0.17 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 CvfB-like winged helix domain Cpn60_TCP1 PF00118.24 gi|15678816|ref|NP_275933.1| - 1.1e-186 621.3 24.7 1.2e-186 621.1 24.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3924 PF13062.6 gi|15678816|ref|NP_275933.1| - 0.016 15.1 0.0 0.054 13.5 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3924) Ribosomal_S13 PF00416.22 gi|15678816|ref|NP_275933.1| - 1.7 9.1 4.2 2.4 8.6 0.6 2.7 2 0 0 2 2 2 0 Ribosomal protein S13/S18 Transglut_core PF01841.19 gi|15678817|ref|NP_275934.1| - 2.8e-28 98.6 2.3 7.2e-28 97.3 2.3 1.8 1 0 0 1 1 1 1 Transglutaminase-like superfamily PMBR PF09373.10 gi|15678817|ref|NP_275934.1| - 3.9e-24 83.6 7.9 1.3e-06 28.3 0.0 4.7 4 0 0 4 4 4 3 Pseudomurein-binding repeat Peptidase_C71 PF12386.8 gi|15678817|ref|NP_275934.1| - 3.9e-06 26.6 0.5 1.2e-05 24.9 0.4 1.8 1 1 0 1 1 1 1 Pseudomurein endo-isopeptidase Pei DUF553 PF04473.12 gi|15678817|ref|NP_275934.1| - 0.007 15.9 0.0 1.8 8.1 0.0 2.5 1 1 1 2 2 2 2 Transglutaminase-like domain Myb_DNA-bind_4 PF13837.6 gi|15678817|ref|NP_275934.1| - 0.021 15.2 0.0 1.2 9.5 0.0 2.9 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain V-SNARE PF05008.15 gi|15678817|ref|NP_275934.1| - 0.041 14.3 0.3 0.086 13.2 0.3 1.5 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus Transglut_core3 PF13471.6 gi|15678817|ref|NP_275934.1| - 0.068 13.1 0.7 0.23 11.4 0.6 1.9 1 1 0 1 1 1 0 Transglutaminase-like superfamily SL4P PF17618.2 gi|15678817|ref|NP_275934.1| - 0.17 12.0 0.2 28 4.9 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized Strongylid L4 protein Cyclase PF04199.13 gi|15678818|ref|NP_275935.1| - 2.6e-23 82.8 0.1 5.1e-20 72.1 0.1 2.1 1 1 0 1 1 1 1 Putative cyclase Methyltrans_SAM PF10672.9 gi|15678818|ref|NP_275935.1| - 0.074 12.2 0.0 0.099 11.8 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase SlyX PF04102.12 gi|15678819|ref|NP_275936.1| - 0.00058 20.4 11.0 0.013 16.1 2.4 2.6 1 1 2 3 3 3 2 SlyX PKcGMP_CC PF16808.5 gi|15678819|ref|NP_275936.1| - 0.0026 17.6 21.1 0.0052 16.6 7.1 4.4 2 1 2 4 4 4 2 Coiled-coil N-terminus of cGMP-dependent protein kinase Bot1p PF12298.8 gi|15678819|ref|NP_275936.1| - 0.0089 16.2 0.2 0.033 14.4 0.0 1.8 1 1 0 2 2 2 1 Eukaryotic mitochondrial regulator protein MqsR_toxin PF15723.5 gi|15678819|ref|NP_275936.1| - 0.013 15.9 0.0 0.027 14.8 0.0 1.6 1 0 0 1 1 1 0 Motility quorum-sensing regulator, toxin of MqsA FAM76 PF16046.5 gi|15678819|ref|NP_275936.1| - 0.02 14.3 3.9 0.025 13.9 3.9 1.2 1 0 0 1 1 1 0 FAM76 protein DpnII PF04556.12 gi|15678819|ref|NP_275936.1| - 0.027 13.8 1.2 0.034 13.5 1.2 1.1 1 0 0 1 1 1 0 DpnII restriction endonuclease DUF2560 PF10834.8 gi|15678819|ref|NP_275936.1| - 0.035 14.3 0.2 0.63 10.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2560) Lebercilin PF15619.6 gi|15678819|ref|NP_275936.1| - 0.037 13.7 9.8 0.056 13.1 0.3 2.4 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease P4Ha_N PF08336.11 gi|15678819|ref|NP_275936.1| - 0.037 14.0 0.6 0.037 14.0 0.6 2.3 2 1 1 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region XLF PF09302.11 gi|15678819|ref|NP_275936.1| - 0.042 14.0 4.6 0.034 14.3 2.3 1.9 1 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF4922 PF16269.5 gi|15678819|ref|NP_275936.1| - 0.083 12.7 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4922) Med9 PF07544.13 gi|15678819|ref|NP_275936.1| - 0.12 12.5 6.6 0.2 11.8 4.7 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Fib_alpha PF08702.10 gi|15678819|ref|NP_275936.1| - 0.13 12.5 4.8 0.18 12.0 3.6 2.0 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family TMF_TATA_bd PF12325.8 gi|15678819|ref|NP_275936.1| - 0.15 12.3 8.0 5.9 7.2 4.7 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Phage_tail_APC PF16778.5 gi|15678819|ref|NP_275936.1| - 0.16 11.9 2.0 2.9 7.8 2.0 2.7 1 1 0 1 1 1 0 Phage tail assembly chaperone protein TolA_bind_tri PF16331.5 gi|15678819|ref|NP_275936.1| - 0.18 11.9 2.7 0.4 10.8 2.0 2.0 1 1 0 1 1 1 0 TolA binding protein trimerisation TMPIT PF07851.13 gi|15678819|ref|NP_275936.1| - 0.33 10.1 4.1 0.27 10.4 2.0 1.7 1 1 1 2 2 2 0 TMPIT-like protein DUF4200 PF13863.6 gi|15678819|ref|NP_275936.1| - 0.46 10.9 10.4 0.71 10.3 3.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF641 PF04859.12 gi|15678819|ref|NP_275936.1| - 1.3 9.4 7.8 1.4 9.3 5.0 2.3 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) UPF0242 PF06785.11 gi|15678819|ref|NP_275936.1| - 1.5 8.9 8.9 0.45 10.6 5.6 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ThylakoidFormat PF11264.8 gi|15678819|ref|NP_275936.1| - 2.9 7.5 7.5 14 5.2 3.7 2.2 2 0 0 2 2 2 0 Thylakoid formation protein XhlA PF10779.9 gi|15678819|ref|NP_275936.1| - 5.7 7.2 9.3 19 5.5 0.7 3.4 2 1 2 4 4 4 0 Haemolysin XhlA PAP2 PF01569.21 gi|15678820|ref|NP_275937.1| - 1.6e-22 79.7 6.2 1.6e-22 79.7 6.2 1.5 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|15678820|ref|NP_275937.1| - 3.8e-10 39.8 10.8 1.2e-09 38.2 10.8 1.7 1 1 0 1 1 1 1 PAP2 superfamily DUF212 PF02681.14 gi|15678820|ref|NP_275937.1| - 0.018 15.1 0.3 1.9 8.6 0.1 2.2 1 1 1 2 2 2 0 Divergent PAP2 family PAP2_C PF14360.6 gi|15678820|ref|NP_275937.1| - 0.041 14.4 0.3 0.041 14.4 0.3 2.0 2 1 0 2 2 2 0 PAP2 superfamily C-terminal YIF1 PF03878.15 gi|15678820|ref|NP_275937.1| - 0.045 13.3 0.2 0.057 12.9 0.2 1.2 1 0 0 1 1 1 0 YIF1 RseC_MucC PF04246.12 gi|15678820|ref|NP_275937.1| - 8.6 6.3 9.6 0.35 10.8 1.5 2.2 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Semialdhyde_dhC PF02774.18 gi|15678821|ref|NP_275938.1| - 1.1e-46 159.3 0.0 1.7e-46 158.6 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|15678821|ref|NP_275938.1| - 7e-37 126.6 0.0 1.1e-36 125.9 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|15678821|ref|NP_275938.1| - 0.00037 20.6 0.0 0.00061 19.9 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_C PF02800.20 gi|15678821|ref|NP_275938.1| - 0.003 17.2 0.1 0.021 14.5 0.0 2.2 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DXP_reductoisom PF02670.16 gi|15678821|ref|NP_275938.1| - 0.013 16.2 0.0 0.032 14.9 0.0 1.6 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sacchrp_dh_NADP PF03435.18 gi|15678821|ref|NP_275938.1| - 0.12 12.6 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_C PF05173.14 gi|15678822|ref|NP_275939.1| - 1.2e-40 138.2 0.0 2e-40 137.6 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|15678822|ref|NP_275939.1| - 1.3e-36 125.5 1.6 2e-36 124.9 1.0 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 gi|15678822|ref|NP_275939.1| - 0.0024 18.5 0.1 0.0051 17.5 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Peripla_BP_6 PF13458.6 gi|15678822|ref|NP_275939.1| - 0.0047 16.6 0.1 0.0082 15.8 0.1 1.4 1 0 0 1 1 1 1 Periplasmic binding protein Epimerase PF01370.21 gi|15678822|ref|NP_275939.1| - 0.0048 16.4 0.1 0.0075 15.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|15678822|ref|NP_275939.1| - 0.022 13.8 0.1 0.035 13.2 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Semialdhyde_dh PF01118.24 gi|15678822|ref|NP_275939.1| - 0.12 12.8 0.4 0.47 10.9 0.1 2.2 3 0 0 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 gi|15678822|ref|NP_275939.1| - 0.12 11.3 0.2 0.17 10.8 0.2 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family DHDPS PF00701.22 gi|15678823|ref|NP_275940.1| - 1.9e-85 286.1 0.1 2.2e-85 285.9 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family AA_kinase PF00696.28 gi|15678824|ref|NP_275941.1| - 1.6e-49 168.7 0.8 1.6e-49 168.7 0.8 1.4 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|15678824|ref|NP_275941.1| - 5.4e-22 77.3 0.3 1e-10 41.3 0.0 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|15678824|ref|NP_275941.1| - 3.8e-13 48.9 0.6 8.5e-06 25.4 0.1 2.8 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.6 gi|15678824|ref|NP_275941.1| - 1.1e-05 25.4 0.3 0.037 14.0 0.0 2.7 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|15678824|ref|NP_275941.1| - 0.00014 22.4 0.5 0.21 12.2 0.1 2.5 2 0 0 2 2 2 2 ACT domain DUF2007 PF09413.10 gi|15678824|ref|NP_275941.1| - 0.00081 19.5 0.0 0.025 14.7 0.0 2.7 2 0 0 2 2 2 1 Putative prokaryotic signal transducing protein Synapsin_N PF10581.9 gi|15678824|ref|NP_275941.1| - 0.13 12.2 0.1 0.26 11.3 0.1 1.4 1 0 0 1 1 1 0 Synapsin N-terminal Ribosomal_S17e PF00833.18 gi|15678825|ref|NP_275942.1| - 4.6e-19 68.5 0.7 4.8e-19 68.5 0.7 1.0 1 0 0 1 1 1 1 Ribosomal S17 Pox_F12L PF03337.13 gi|15678825|ref|NP_275942.1| - 0.041 12.1 0.0 0.041 12.1 0.0 1.0 1 0 0 1 1 1 0 Poxvirus F12L protein CM_2 PF01817.21 gi|15678826|ref|NP_275943.1| - 5.5e-17 61.9 6.8 8.1e-17 61.4 6.8 1.3 1 0 0 1 1 1 1 Chorismate mutase type II RepL PF05732.11 gi|15678826|ref|NP_275943.1| - 0.025 14.0 0.3 0.036 13.5 0.3 1.3 1 1 0 1 1 1 0 Firmicute plasmid replication protein (RepL) E3_binding PF02817.17 gi|15678826|ref|NP_275943.1| - 0.062 13.7 0.7 0.15 12.4 0.1 1.9 2 0 0 2 2 2 0 e3 binding domain GHMP_kinases_N PF00288.26 gi|15678827|ref|NP_275944.1| - 1.1e-12 48.0 7.3 1.1e-12 48.0 3.4 2.3 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15678827|ref|NP_275944.1| - 1.8e-06 28.2 0.2 1e-05 25.8 0.1 2.1 2 0 0 2 2 2 1 GHMP kinases C terminal Peptidase_S49 PF01343.18 gi|15678828|ref|NP_275945.1| - 3.6e-55 186.1 1.4 4.6e-55 185.8 1.4 1.1 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.16 gi|15678828|ref|NP_275945.1| - 7.3e-05 21.9 0.1 9.5e-05 21.5 0.1 1.2 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Ligase_CoA PF00549.19 gi|15678828|ref|NP_275945.1| - 0.012 15.5 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 CoA-ligase CLP_protease PF00574.23 gi|15678828|ref|NP_275945.1| - 0.019 14.9 0.0 0.036 14.0 0.0 1.4 1 0 0 1 1 1 0 Clp protease Succ_CoA_lig PF13607.6 gi|15678828|ref|NP_275945.1| - 0.05 13.4 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Succinyl-CoA ligase like flavodoxin domain ECH_1 PF00378.20 gi|15678828|ref|NP_275945.1| - 0.11 11.8 0.1 0.81 8.9 0.0 2.2 1 1 1 2 2 2 0 Enoyl-CoA hydratase/isomerase Thioredoxin_3 PF13192.6 gi|15678829|ref|NP_275946.1| - 2.5e-16 59.5 0.3 2.9e-16 59.2 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|15678829|ref|NP_275946.1| - 1.3e-13 51.0 0.2 1.6e-13 50.6 0.2 1.1 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.20 gi|15678829|ref|NP_275946.1| - 1.7e-06 28.0 0.0 2e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DUF836 PF05768.14 gi|15678829|ref|NP_275946.1| - 4e-06 27.2 0.0 4.3e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DSBA PF01323.20 gi|15678829|ref|NP_275946.1| - 6.4e-06 26.1 0.1 0.018 14.8 0.0 2.0 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|15678829|ref|NP_275946.1| - 1.1e-05 25.7 0.2 0.025 14.8 0.3 2.0 1 1 1 2 2 2 2 Thioredoxin DUF1223 PF06764.11 gi|15678829|ref|NP_275946.1| - 0.0077 16.3 0.0 0.04 13.9 0.0 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF1223) Thioredoxin_2 PF13098.6 gi|15678829|ref|NP_275946.1| - 0.024 15.1 0.7 0.072 13.6 0.7 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain CbiD PF01888.17 gi|15678830|ref|NP_275947.1| - 7.6e-90 300.6 0.1 1e-89 300.2 0.1 1.1 1 0 0 1 1 1 1 CbiD Robl_LC7 PF03259.17 gi|15678830|ref|NP_275947.1| - 0.0053 16.5 3.0 0.02 14.6 0.2 2.8 4 0 0 4 4 4 1 Roadblock/LC7 domain MoaC PF01967.21 gi|15678831|ref|NP_275948.1| - 1.5e-52 177.3 0.8 1.9e-52 177.0 0.8 1.0 1 0 0 1 1 1 1 MoaC family DEAD PF00270.29 gi|15678832|ref|NP_275949.1| - 1.5e-14 54.2 0.0 7e-14 52.0 0.0 2.2 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15678832|ref|NP_275949.1| - 9.9e-08 32.3 0.0 1.1e-06 29.0 0.0 2.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain HHH_2 PF12826.7 gi|15678832|ref|NP_275949.1| - 5.8e-07 29.5 0.0 4.3e-06 26.7 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|15678832|ref|NP_275949.1| - 5.7e-06 25.9 0.3 0.00026 20.7 0.0 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif ResIII PF04851.15 gi|15678832|ref|NP_275949.1| - 6e-06 26.4 0.0 3.7e-05 23.8 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|15678832|ref|NP_275949.1| - 3.9e-05 24.2 0.1 0.00012 22.6 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|15678832|ref|NP_275949.1| - 0.0023 18.3 0.0 0.0063 16.9 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_30 PF13604.6 gi|15678832|ref|NP_275949.1| - 0.013 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|15678832|ref|NP_275949.1| - 0.043 13.3 0.0 0.086 12.3 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein HHH_3 PF12836.7 gi|15678832|ref|NP_275949.1| - 0.045 14.0 0.0 0.47 10.8 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF126 PF01989.16 gi|15678832|ref|NP_275949.1| - 0.058 13.2 0.0 1.2 9.0 0.0 2.4 2 0 0 2 2 2 0 Aconitase X swivel domain IstB_IS21 PF01695.17 gi|15678832|ref|NP_275949.1| - 0.13 12.0 0.0 0.6 9.8 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF2115 PF09888.9 gi|15678833|ref|NP_275950.1| - 6.9e-40 137.2 0.0 2.2e-39 135.6 0.0 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) DUF2115 PF09888.9 gi|15678834|ref|NP_275951.1| - 2.6e-53 180.9 0.2 3e-53 180.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) DUF308 PF03729.13 gi|15678835|ref|NP_275952.1| - 2.9e-08 33.9 52.1 9.3e-07 29.1 21.9 3.1 2 1 1 3 3 3 2 Short repeat of unknown function (DUF308) DUF4418 PF14387.6 gi|15678835|ref|NP_275952.1| - 4.5 7.5 22.1 0.31 11.3 4.4 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4418) DUF2098 PF09871.9 gi|15678836|ref|NP_275953.1| - 2.5e-25 88.6 0.7 2.9e-25 88.4 0.7 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) YdfZ PF14001.6 gi|15678836|ref|NP_275953.1| - 0.0059 17.0 0.1 0.011 16.1 0.1 1.5 1 0 0 1 1 1 1 YdfZ protein PRC PF05239.16 gi|15678837|ref|NP_275954.1| - 1.4e-13 50.7 0.4 1.6e-13 50.5 0.4 1.1 1 0 0 1 1 1 1 PRC-barrel domain CBS PF00571.28 gi|15678838|ref|NP_275955.1| - 1.9e-24 85.8 4.0 1.1e-11 45.0 0.1 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|15678838|ref|NP_275955.1| - 2.5e-13 49.9 20.3 1.5e-07 30.9 2.9 3.8 2 2 2 4 4 4 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|15678838|ref|NP_275955.1| - 0.00016 21.4 14.5 0.00083 19.0 14.5 2.0 1 1 0 1 1 1 1 Peptidase M50B-like DUF3267 PF11667.8 gi|15678838|ref|NP_275955.1| - 0.0051 17.1 3.2 0.0051 17.1 3.2 2.6 3 0 0 3 3 3 1 Putative zincin peptidase Radical_SAM_C PF16199.5 gi|15678839|ref|NP_275956.1| - 5.5e-27 93.6 0.3 1.2e-26 92.6 0.3 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|15678839|ref|NP_275956.1| - 8.3e-22 78.3 0.3 1.5e-20 74.3 0.2 2.7 2 1 0 2 2 2 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|15678839|ref|NP_275956.1| - 2.9e-07 30.8 0.1 1.8e-06 28.2 0.0 2.2 1 1 1 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15678839|ref|NP_275956.1| - 0.00027 20.9 0.5 0.0021 18.0 0.1 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain MTTB PF06253.11 gi|15678839|ref|NP_275956.1| - 0.013 13.5 0.0 0.026 12.5 0.0 1.4 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) Diphthami_syn_2 PF01902.17 gi|15678839|ref|NP_275956.1| - 0.14 11.6 0.1 0.28 10.7 0.1 1.4 1 0 0 1 1 1 0 Diphthamide synthase DeoC PF01791.9 gi|15678840|ref|NP_275957.1| - 1.4e-11 44.5 4.3 1.7e-11 44.2 4.3 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase DAHP_snth_FXD PF18152.1 gi|15678840|ref|NP_275957.1| - 0.0013 18.5 0.0 0.21 11.5 0.0 2.7 1 1 0 1 1 1 1 DAHP synthase ferredoxin-like domain NanE PF04131.14 gi|15678840|ref|NP_275957.1| - 0.01 15.1 1.9 0.011 15.0 0.8 1.6 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|15678840|ref|NP_275957.1| - 0.021 14.0 2.5 0.022 14.0 1.5 1.5 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|15678840|ref|NP_275957.1| - 0.025 14.0 0.9 0.059 12.8 0.3 1.9 2 0 0 2 2 2 0 Histidine biosynthesis protein Dus PF01207.17 gi|15678840|ref|NP_275957.1| - 0.11 11.5 0.4 0.18 10.9 0.4 1.4 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) Cyclophil_like PF04126.13 gi|15678841|ref|NP_275958.1| - 4.2e-39 133.0 0.0 4.8e-39 132.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin-like Cyclophil_like2 PF18050.1 gi|15678841|ref|NP_275958.1| - 2.2e-09 37.3 0.0 2.5e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin-like family Radical_SAM PF04055.21 gi|15678842|ref|NP_275959.1| - 4.1e-19 69.6 0.1 8.4e-19 68.6 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily CBFD_NFYB_HMF PF00808.23 gi|15678843|ref|NP_275960.1| - 2e-22 79.3 1.4 2.1e-22 79.1 1.4 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|15678843|ref|NP_275960.1| - 2e-11 44.4 0.1 2.1e-11 44.3 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|15678843|ref|NP_275960.1| - 3.9e-07 30.2 0.1 4.2e-07 30.1 0.1 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 gi|15678843|ref|NP_275960.1| - 6.3e-06 26.3 0.7 6.6e-06 26.2 0.7 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID_20kDa PF03847.13 gi|15678843|ref|NP_275960.1| - 0.00017 22.0 0.1 0.00021 21.7 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A CENP-S PF15630.6 gi|15678843|ref|NP_275960.1| - 0.00079 19.8 0.1 0.001 19.4 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein Bromo_TP PF07524.13 gi|15678843|ref|NP_275960.1| - 0.013 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated GnsAB_toxin PF08178.11 gi|15678843|ref|NP_275960.1| - 0.015 15.2 1.5 0.023 14.6 1.5 1.3 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system HK97-gp10_like PF04883.12 gi|15678843|ref|NP_275960.1| - 0.035 15.1 1.9 0.042 14.8 1.9 1.2 1 0 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component CENP-X PF09415.10 gi|15678843|ref|NP_275960.1| - 0.043 14.1 1.0 0.048 14.0 1.0 1.1 1 0 0 1 1 1 0 CENP-S associating Centromere protein X Con-6 PF10346.9 gi|15678843|ref|NP_275960.1| - 0.055 13.5 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Conidiation protein 6 Rbsn PF11464.8 gi|15678843|ref|NP_275960.1| - 0.057 13.2 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 Rabenosyn Rab binding domain LacI PF00356.21 gi|15678843|ref|NP_275960.1| - 0.071 12.9 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family DUF4398 PF14346.6 gi|15678843|ref|NP_275960.1| - 0.073 13.7 5.1 0.091 13.4 5.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4398) TFIID-31kDa PF02291.15 gi|15678843|ref|NP_275960.1| - 0.088 12.9 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit phage_tail_N PF08400.10 gi|15678843|ref|NP_275960.1| - 0.097 12.7 0.4 0.12 12.4 0.4 1.1 1 0 0 1 1 1 0 Prophage tail fibre N-terminal Rubrerythrin PF02915.17 gi|15678844|ref|NP_275961.1| - 3.5e-26 92.2 13.4 2.5e-25 89.5 13.4 1.9 1 1 0 1 1 1 1 Rubrerythrin DZR PF12773.7 gi|15678844|ref|NP_275961.1| - 0.0012 18.9 0.2 0.0018 18.2 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon Ferritin PF00210.24 gi|15678844|ref|NP_275961.1| - 0.0055 16.7 6.2 0.0079 16.1 4.7 2.0 1 1 1 2 2 2 1 Ferritin-like domain Ribosomal_L12 PF00542.19 gi|15678844|ref|NP_275961.1| - 0.0079 16.5 1.0 0.2 12.0 0.0 2.4 2 0 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain zf-C3HC4_3 PF13920.6 gi|15678844|ref|NP_275961.1| - 0.013 15.3 0.2 0.02 14.8 0.2 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_2 PF13240.6 gi|15678844|ref|NP_275961.1| - 0.019 14.7 2.6 0.03 14.0 2.6 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zf-RING_4 PF14570.6 gi|15678844|ref|NP_275961.1| - 0.027 14.2 1.1 0.059 13.2 1.1 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn-ribbon_8 PF09723.10 gi|15678844|ref|NP_275961.1| - 0.05 13.7 1.5 0.14 12.3 1.5 1.7 1 0 0 1 1 1 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|15678844|ref|NP_275961.1| - 0.053 12.9 3.3 0.69 9.4 0.6 2.2 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|15678844|ref|NP_275961.1| - 0.06 13.4 0.2 0.12 12.4 0.2 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1_2 PF03107.16 gi|15678844|ref|NP_275961.1| - 0.09 13.1 0.4 0.17 12.3 0.4 1.5 1 0 0 1 1 1 0 C1 domain Acetone_carb_G PF08882.11 gi|15678844|ref|NP_275961.1| - 0.09 12.9 0.2 0.23 11.6 0.1 1.7 2 0 0 2 2 2 0 Acetone carboxylase gamma subunit zf_C2H2_13 PF18508.1 gi|15678844|ref|NP_275961.1| - 0.52 9.9 0.1 0.52 9.9 0.1 2.0 2 0 0 2 2 2 0 Zinc finger domain DUF2524 PF10732.9 gi|15678844|ref|NP_275961.1| - 0.86 10.0 3.4 3.3 8.1 0.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) Desulfoferrod_N PF06397.12 gi|15678844|ref|NP_275961.1| - 1 9.0 6.4 0.59 9.8 1.8 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain PAS_9 PF13426.7 gi|15678845|ref|NP_275962.1| - 4.8e-36 123.2 2.5 2.9e-13 50.0 0.5 3.9 4 0 0 4 4 4 3 PAS domain PAS PF00989.25 gi|15678845|ref|NP_275962.1| - 5.3e-32 110.2 0.4 1.8e-13 50.5 0.1 3.7 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|15678845|ref|NP_275962.1| - 1e-29 102.4 3.5 3.2e-29 100.8 3.5 1.9 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.7 gi|15678845|ref|NP_275962.1| - 1.4e-26 92.0 0.1 4.2e-10 39.4 0.0 3.7 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.10 gi|15678845|ref|NP_275962.1| - 2.2e-22 79.4 0.0 1.2e-06 28.7 0.0 3.8 4 0 0 4 4 4 3 PAS fold HATPase_c_2 PF13581.6 gi|15678845|ref|NP_275962.1| - 1.5e-08 34.6 0.0 4.8e-08 33.0 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.26 gi|15678845|ref|NP_275962.1| - 8.9e-08 32.6 0.0 4.8e-07 30.3 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.12 gi|15678845|ref|NP_275962.1| - 9.6e-06 25.8 0.1 0.018 15.3 0.0 3.7 3 0 0 3 3 3 1 PAS fold HWE_HK PF07536.14 gi|15678845|ref|NP_275962.1| - 2.8e-05 24.7 1.1 8.5e-05 23.2 1.1 1.9 1 0 0 1 1 1 1 HWE histidine kinase PAS_7 PF12860.7 gi|15678845|ref|NP_275962.1| - 0.00021 21.4 1.1 0.015 15.4 0.1 3.4 2 2 1 3 3 3 1 PAS fold 7tm_6 PF02949.20 gi|15678845|ref|NP_275962.1| - 0.0017 17.5 0.8 0.0029 16.7 0.8 1.2 1 0 0 1 1 1 1 7tm Odorant receptor MASE1 PF05231.14 gi|15678845|ref|NP_275962.1| - 0.014 14.6 8.2 0.021 14.0 8.2 1.1 1 0 0 1 1 1 0 MASE1 PAS_11 PF14598.6 gi|15678845|ref|NP_275962.1| - 0.022 14.8 0.0 0.72 10.0 0.0 2.8 2 0 0 2 2 2 0 PAS domain PAS_10 PF13596.6 gi|15678845|ref|NP_275962.1| - 0.028 15.0 0.0 0.078 13.6 0.0 1.8 1 0 0 1 1 1 0 PAS domain DUF4118 PF13493.6 gi|15678845|ref|NP_275962.1| - 0.22 11.3 10.5 0.49 10.2 10.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) UPF0004 PF00919.20 gi|15678846|ref|NP_275963.1| - 2.9e-24 85.0 0.0 6.5e-24 83.8 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 gi|15678846|ref|NP_275963.1| - 4.9e-19 69.3 0.0 9.6e-19 68.4 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 gi|15678846|ref|NP_275963.1| - 5.1e-08 32.8 0.7 9.4e-08 31.9 0.1 1.8 2 0 0 2 2 2 1 TRAM domain PCMT PF01135.19 gi|15678847|ref|NP_275964.1| - 8e-72 241.4 0.0 9.4e-72 241.2 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GCD14 PF08704.10 gi|15678847|ref|NP_275964.1| - 1.2e-09 38.2 0.0 1.7e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|15678847|ref|NP_275964.1| - 1.8e-07 31.1 0.0 2.7e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|15678847|ref|NP_275964.1| - 1.2e-06 27.8 0.0 1.6e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Fibrillarin PF01269.17 gi|15678847|ref|NP_275964.1| - 0.00013 21.2 0.0 0.00019 20.6 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|15678847|ref|NP_275964.1| - 0.00014 22.5 0.0 0.00031 21.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|15678847|ref|NP_275964.1| - 0.0025 17.2 0.0 0.0033 16.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltr_RsmB-F PF01189.17 gi|15678847|ref|NP_275964.1| - 0.0056 16.3 0.0 0.0079 15.8 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 gi|15678847|ref|NP_275964.1| - 0.01 15.2 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 gi|15678847|ref|NP_275964.1| - 0.011 14.9 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_23 PF13489.6 gi|15678847|ref|NP_275964.1| - 0.014 15.3 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 gi|15678847|ref|NP_275964.1| - 0.016 16.2 0.0 0.025 15.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|15678847|ref|NP_275964.1| - 0.06 12.8 0.0 0.091 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase zinc_ribbon_5 PF13719.6 gi|15678848|ref|NP_275965.1| - 0.0028 17.4 0.8 0.88 9.4 0.0 2.6 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15678848|ref|NP_275965.1| - 0.004 16.6 0.7 1.5 8.4 0.0 2.4 2 0 0 2 2 2 2 TFIIB zinc-binding UPF0547 PF10571.9 gi|15678848|ref|NP_275965.1| - 0.016 15.3 1.4 0.19 11.8 0.0 2.8 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.10 gi|15678848|ref|NP_275965.1| - 0.081 13.1 0.6 7 6.9 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|15678848|ref|NP_275965.1| - 0.084 13.3 0.1 0.13 12.6 0.1 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-C2H2 PF00096.26 gi|15678848|ref|NP_275965.1| - 0.12 12.9 0.4 6.1 7.5 0.0 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|15678848|ref|NP_275965.1| - 0.17 12.8 0.9 26 6.0 0.1 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger Aconitase_C PF00694.19 gi|15678849|ref|NP_275966.1| - 1.1e-21 77.6 0.1 5.1e-20 72.1 0.2 2.1 1 1 1 2 2 2 2 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|15678849|ref|NP_275966.1| - 0.049 13.3 0.1 0.27 10.8 0.1 1.9 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus MTTB PF06253.11 gi|15678849|ref|NP_275966.1| - 0.11 10.5 0.0 0.13 10.2 0.0 1.1 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) GHMP_kinases_N PF00288.26 gi|15678850|ref|NP_275967.1| - 6.5e-08 32.7 0.4 6.5e-08 32.7 0.4 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15678850|ref|NP_275967.1| - 5.9e-07 29.8 0.0 1.1e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal Radical_SAM PF04055.21 gi|15678851|ref|NP_275968.1| - 1.1e-22 81.2 1.0 3.7e-21 76.2 0.1 2.4 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15678851|ref|NP_275968.1| - 1.9e-07 31.5 0.2 1.1e-06 28.9 0.0 2.0 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15678851|ref|NP_275968.1| - 9.4e-07 29.0 0.1 5.6e-06 26.5 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain AP_endonuc_2 PF01261.24 gi|15678851|ref|NP_275968.1| - 0.13 11.7 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel CarS-like PF01864.17 gi|15678852|ref|NP_275969.1| - 5.8e-77 257.6 17.3 8.6e-77 257.0 17.3 1.2 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|15678852|ref|NP_275969.1| - 0.014 15.2 8.2 0.014 15.2 8.2 2.4 2 1 1 3 3 3 0 Cytidylyltransferase family Hydantoinase_A PF01968.18 gi|15678854|ref|NP_275971.1| - 1.2e-25 90.3 5.6 6.8e-25 87.9 1.9 2.1 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase MutL PF13941.6 gi|15678854|ref|NP_275971.1| - 0.0015 17.2 1.4 0.0066 15.1 0.3 2.1 2 0 0 2 2 2 1 MutL protein Hydant_A_N PF05378.13 gi|15678854|ref|NP_275971.1| - 0.042 13.6 1.6 2.6 7.7 0.2 2.5 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.6 gi|15678854|ref|NP_275971.1| - 0.079 13.4 0.5 21 5.6 0.1 2.8 2 1 0 2 2 2 0 Cell division protein FtsA ATP-grasp_3 PF02655.14 gi|15678855|ref|NP_275972.1| - 1e-47 162.2 0.0 1.4e-47 161.8 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain preATP-grasp_3 PF18301.1 gi|15678855|ref|NP_275972.1| - 2.7e-06 27.6 0.0 4.6e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 pre ATP-grasp 3 domain ATPgrasp_ST PF14397.6 gi|15678855|ref|NP_275972.1| - 0.00077 18.8 0.0 0.14 11.4 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATPgrasp_Ter PF15632.6 gi|15678855|ref|NP_275972.1| - 0.0014 18.4 0.0 0.0062 16.3 0.0 2.1 3 1 0 3 3 3 1 ATP-grasp in the biosynthetic pathway with Ter operon GARS_A PF01071.19 gi|15678855|ref|NP_275972.1| - 0.16 11.7 0.0 0.71 9.6 0.0 1.9 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UDPG_MGDP_dh_N PF03721.14 gi|15678856|ref|NP_275973.1| - 1.3e-60 204.1 0.0 2.1e-60 203.5 0.0 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|15678856|ref|NP_275973.1| - 3.3e-31 107.4 0.1 2.3e-30 104.7 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|15678856|ref|NP_275973.1| - 6.8e-18 65.0 0.0 2.4e-17 63.2 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 2-Hacid_dh_C PF02826.19 gi|15678856|ref|NP_275973.1| - 1.6e-08 34.1 1.4 0.0018 17.7 0.0 3.8 3 2 1 4 4 4 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|15678856|ref|NP_275973.1| - 8.9e-07 29.2 0.3 4.3e-06 27.0 0.3 2.4 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|15678856|ref|NP_275973.1| - 3.4e-06 27.1 0.7 5e-05 23.3 0.0 2.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|15678856|ref|NP_275973.1| - 1.4e-05 25.1 0.0 4.6e-05 23.4 0.0 1.9 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|15678856|ref|NP_275973.1| - 0.00073 20.1 2.4 0.76 10.4 0.1 3.8 4 0 0 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 gi|15678856|ref|NP_275973.1| - 0.0042 17.5 2.2 3.1 8.3 0.2 3.8 3 1 0 3 3 3 1 Putative NAD(P)-binding ThiF PF00899.21 gi|15678856|ref|NP_275973.1| - 0.011 15.1 0.0 0.025 13.9 0.0 1.6 2 0 0 2 2 2 0 ThiF family XdhC_C PF13478.6 gi|15678856|ref|NP_275973.1| - 0.013 16.0 0.0 0.065 13.7 0.0 2.1 2 0 0 2 2 2 0 XdhC Rossmann domain AlaDh_PNT_C PF01262.21 gi|15678856|ref|NP_275973.1| - 0.019 14.3 0.3 0.019 14.3 0.3 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|15678856|ref|NP_275973.1| - 0.02 15.2 2.0 0.053 13.8 0.0 2.7 3 0 0 3 3 3 0 TrkA-N domain TylF PF05711.11 gi|15678856|ref|NP_275973.1| - 0.036 13.3 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) ApbA PF02558.16 gi|15678856|ref|NP_275973.1| - 0.038 13.6 0.1 0.092 12.4 0.1 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF4129 PF13559.6 gi|15678856|ref|NP_275973.1| - 0.072 13.4 0.9 11 6.4 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4129) NAD_binding_11 PF14833.6 gi|15678856|ref|NP_275973.1| - 0.078 13.2 0.2 0.54 10.5 0.2 2.2 2 0 0 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Epimerase_2 PF02350.19 gi|15678857|ref|NP_275974.1| - 8.7e-121 403.0 0.0 1.1e-120 402.7 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_4 PF13579.6 gi|15678857|ref|NP_275974.1| - 7.5e-05 23.2 0.0 0.00019 21.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|15678857|ref|NP_275974.1| - 0.0022 18.0 0.0 0.0037 17.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|15678857|ref|NP_275974.1| - 0.023 14.7 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|15678857|ref|NP_275974.1| - 0.08 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF1894 PF08979.11 gi|15678857|ref|NP_275974.1| - 0.13 12.6 0.0 2.1 8.8 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1894) GAS PF13851.6 gi|15678858|ref|NP_275975.1| - 0.0095 15.3 5.6 0.0095 15.3 5.6 3.0 2 1 1 3 3 3 1 Growth-arrest specific micro-tubule binding Lzipper-MIP1 PF14389.6 gi|15678858|ref|NP_275975.1| - 0.021 15.1 12.9 0.43 10.9 0.8 3.4 3 0 0 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 DUF4250 PF14056.6 gi|15678858|ref|NP_275975.1| - 0.044 13.7 0.3 0.18 11.8 0.3 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) Herpes_UL6 PF01763.16 gi|15678858|ref|NP_275975.1| - 0.061 11.8 3.6 0.097 11.2 3.6 1.4 1 0 0 1 1 1 0 Herpesvirus UL6 like DivIC PF04977.15 gi|15678858|ref|NP_275975.1| - 0.077 12.8 18.4 0.94 9.3 0.2 3.3 3 0 0 3 3 3 0 Septum formation initiator FUSC PF04632.12 gi|15678858|ref|NP_275975.1| - 0.43 9.1 0.6 0.7 8.4 0.6 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family SlyX PF04102.12 gi|15678858|ref|NP_275975.1| - 6.7 7.4 11.7 2.2 9.0 1.2 3.3 3 0 0 3 3 3 0 SlyX DUF460 PF04312.13 gi|15678859|ref|NP_275976.1| - 8.1e-39 132.5 0.0 9.1e-39 132.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF460) SsgA PF04686.12 gi|15678859|ref|NP_275976.1| - 0.16 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA PseudoU_synth_1 PF01416.20 gi|15678860|ref|NP_275977.1| - 3.1e-29 101.6 0.0 2.5e-22 79.4 0.0 2.3 2 0 0 2 2 2 2 tRNA pseudouridine synthase EamA PF00892.20 gi|15678861|ref|NP_275978.1| - 2.1e-58 196.4 41.3 1.6e-37 128.7 13.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF1218 PF06749.12 gi|15678861|ref|NP_275978.1| - 1.2 9.7 5.3 28 5.3 0.2 3.5 3 1 0 3 3 3 0 Protein of unknown function (DUF1218) V4R PF02830.18 gi|15678862|ref|NP_275979.1| - 6.6e-20 70.9 1.6 9.9e-20 70.3 1.6 1.3 1 0 0 1 1 1 1 V4R domain DUF2507 PF10702.9 gi|15678862|ref|NP_275979.1| - 0.013 15.4 0.0 0.021 14.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2507) His_biosynth PF00977.21 gi|15678863|ref|NP_275980.1| - 1.5e-75 253.6 0.2 1.8e-75 253.3 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|15678863|ref|NP_275980.1| - 8.8e-09 34.9 0.1 0.00097 18.3 0.0 2.2 1 1 0 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|15678863|ref|NP_275980.1| - 7.1e-06 25.5 0.2 0.015 14.6 0.1 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|15678863|ref|NP_275980.1| - 0.00098 18.6 0.7 0.038 13.4 0.2 2.1 1 1 1 2 2 2 1 Nitronate monooxygenase Trp_syntA PF00290.20 gi|15678863|ref|NP_275980.1| - 0.0019 17.1 0.1 1 8.1 0.0 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain TMP-TENI PF02581.17 gi|15678863|ref|NP_275980.1| - 0.012 15.0 0.1 0.26 10.6 0.0 2.3 2 1 0 2 2 2 0 Thiamine monophosphate synthase IGPS PF00218.21 gi|15678863|ref|NP_275980.1| - 0.038 13.1 0.2 0.13 11.4 0.1 2.0 2 1 0 2 2 2 0 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|15678863|ref|NP_275980.1| - 0.041 13.1 0.1 0.69 9.1 0.0 2.2 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase GRDA PF04723.14 gi|15678863|ref|NP_275980.1| - 0.06 13.1 0.0 0.31 10.8 0.0 2.0 2 0 0 2 2 2 0 Glycine reductase complex selenoprotein A PcrB PF01884.17 gi|15678863|ref|NP_275980.1| - 0.063 12.7 0.8 0.19 11.1 0.1 1.9 2 0 0 2 2 2 0 PcrB family G3P_antiterm PF04309.12 gi|15678863|ref|NP_275980.1| - 0.065 12.6 0.1 10 5.5 0.0 2.2 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 gi|15678863|ref|NP_275980.1| - 0.14 11.1 1.0 5.9 5.8 0.1 2.3 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain CTP_transf_like PF01467.26 gi|15678864|ref|NP_275981.1| - 1.8e-20 73.6 0.0 2.2e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|15678864|ref|NP_275981.1| - 0.0005 20.0 0.1 0.0014 18.6 0.1 1.9 1 1 0 1 1 1 1 FAD synthetase SAP PF02037.27 gi|15678864|ref|NP_275981.1| - 0.0076 16.0 0.1 0.019 14.7 0.1 1.7 1 0 0 1 1 1 1 SAP domain Transglut_core PF01841.19 gi|15678865|ref|NP_275982.1| - 4.6e-25 88.2 0.4 4.6e-25 88.2 0.4 2.5 2 1 0 2 2 2 1 Transglutaminase-like superfamily Peptidase_C71 PF12386.8 gi|15678865|ref|NP_275982.1| - 2.7e-07 30.3 1.1 2.7e-07 30.3 1.1 2.4 1 1 2 3 3 3 1 Pseudomurein endo-isopeptidase Pei HA PF03457.14 gi|15678865|ref|NP_275982.1| - 0.037 14.4 0.0 0.69 10.3 0.0 2.3 1 1 1 2 2 2 0 Helicase associated domain Semialdhyde_dh PF01118.24 gi|161484929|ref|NP_275983.2| - 5.3e-36 123.7 0.0 7.7e-36 123.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|161484929|ref|NP_275983.2| - 3.9e-29 102.0 0.0 6.4e-29 101.3 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 gi|161484929|ref|NP_275983.2| - 0.00024 21.2 0.0 0.00045 20.3 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 gi|161484929|ref|NP_275983.2| - 0.0027 16.8 0.0 0.0046 16.1 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain GFO_IDH_MocA PF01408.22 gi|161484929|ref|NP_275983.2| - 0.0061 17.4 0.0 0.011 16.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding_2 PF13380.6 gi|161484929|ref|NP_275983.2| - 0.013 15.9 0.0 0.034 14.7 0.0 1.7 2 0 0 2 2 2 0 CoA binding domain Sacchrp_dh_NADP PF03435.18 gi|161484929|ref|NP_275983.2| - 0.018 15.3 0.0 0.041 14.2 0.0 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Cerato-platanin PF07249.12 gi|161484929|ref|NP_275983.2| - 0.019 15.0 0.0 0.036 14.2 0.0 1.3 1 0 0 1 1 1 0 Cerato-platanin Epimerase PF01370.21 gi|161484929|ref|NP_275983.2| - 0.13 11.7 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_3 PF03447.16 gi|161484929|ref|NP_275983.2| - 0.15 12.7 0.0 0.28 11.9 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Flavodoxin_3 PF12641.7 gi|15678867|ref|NP_275984.1| - 2.7e-08 33.6 0.0 0.00051 19.8 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|15678867|ref|NP_275984.1| - 3.8e-08 33.7 0.1 0.00089 19.5 0.0 2.3 1 1 1 2 2 2 2 Flavodoxin Flavodoxin_4 PF12682.7 gi|15678867|ref|NP_275984.1| - 3.2e-07 30.2 0.0 8.6e-07 28.8 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|15678867|ref|NP_275984.1| - 8.7e-07 29.3 0.0 0.0066 16.7 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin domain FMN_red PF03358.15 gi|15678867|ref|NP_275984.1| - 5.4e-05 23.0 0.0 7.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase SecD_SecF PF02355.16 gi|15678868|ref|NP_275985.1| - 5.9e-46 156.2 13.4 7.2e-46 156.0 13.4 1.1 1 0 0 1 1 1 1 Protein export membrane protein Patched PF02460.18 gi|15678868|ref|NP_275985.1| - 2.3e-06 26.0 11.2 2.9e-06 25.7 11.2 1.1 1 0 0 1 1 1 1 Patched family YpmT PF17431.2 gi|15678868|ref|NP_275985.1| - 0.006 16.6 0.1 0.019 15.0 0.1 1.8 1 0 0 1 1 1 1 Uncharacterized YmpT-like SecD_SecF PF02355.16 gi|15678869|ref|NP_275986.1| - 1.2e-16 60.6 8.3 2.4e-16 59.7 8.3 1.4 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|15678869|ref|NP_275986.1| - 3.8e-07 29.4 0.1 7.6e-07 28.4 0.1 1.5 1 0 0 1 1 1 1 SecD/SecF GG Motif MMPL PF03176.15 gi|15678869|ref|NP_275986.1| - 3.9e-05 22.8 16.6 3.9e-05 22.8 16.6 2.0 2 1 0 2 2 2 1 MMPL family PyrI PF01948.18 gi|15678870|ref|NP_275987.1| - 1.7e-34 117.9 1.4 2.2e-34 117.6 1.4 1.1 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|15678870|ref|NP_275987.1| - 4.9e-20 71.2 1.3 8.3e-20 70.4 1.3 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain PMBR PF09373.10 gi|15678871|ref|NP_275988.1| - 5.4e-21 73.7 0.4 3.6e-11 42.7 0.3 2.9 2 0 0 2 2 2 2 Pseudomurein-binding repeat CW_binding_2 PF04122.12 gi|15678871|ref|NP_275988.1| - 0.15 12.7 1.0 4.7 7.9 0.1 3.0 2 1 1 3 3 3 0 Putative cell wall binding repeat 2 AstE_AspA PF04952.14 gi|15678872|ref|NP_275989.1| - 6.3e-12 45.2 0.0 3.5e-11 42.7 0.0 1.9 1 1 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M14 PF00246.24 gi|15678872|ref|NP_275989.1| - 0.045 13.5 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 Zinc carboxypeptidase GMC_oxred_N PF00732.19 gi|15678873|ref|NP_275990.1| - 1.8e-20 73.5 0.4 1.5e-18 67.2 0.0 2.9 2 1 1 3 3 3 1 GMC oxidoreductase GMC_oxred_C PF05199.13 gi|15678873|ref|NP_275990.1| - 5e-12 46.6 0.0 9.6e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|15678873|ref|NP_275990.1| - 7.1e-10 39.0 2.5 0.00044 19.9 0.6 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15678873|ref|NP_275990.1| - 2e-07 30.5 2.3 0.0013 17.9 0.8 2.5 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.14 gi|15678873|ref|NP_275990.1| - 1.7e-06 27.5 0.4 0.00029 20.2 0.6 3.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15678873|ref|NP_275990.1| - 3e-05 24.1 1.4 9.8e-05 22.5 0.5 2.5 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|15678873|ref|NP_275990.1| - 4.9e-05 22.7 2.0 9.3e-05 21.8 2.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|15678873|ref|NP_275990.1| - 9.7e-05 21.8 0.0 0.22 10.7 0.0 2.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Fer4_10 PF13237.6 gi|15678873|ref|NP_275990.1| - 0.00046 20.3 0.1 0.00091 19.3 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Pyr_redox PF00070.27 gi|15678873|ref|NP_275990.1| - 0.0017 18.8 0.9 0.0064 17.0 0.3 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15678873|ref|NP_275990.1| - 0.0031 16.6 0.3 0.53 9.3 0.0 2.1 2 0 0 2 2 2 2 Glucose inhibited division protein A Fer4_6 PF12837.7 gi|15678873|ref|NP_275990.1| - 0.0055 16.7 3.5 0.0055 16.7 3.5 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15678873|ref|NP_275990.1| - 0.019 15.0 2.7 0.041 14.0 2.7 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678873|ref|NP_275990.1| - 0.032 14.8 0.1 0.063 13.9 0.1 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain HI0933_like PF03486.14 gi|15678873|ref|NP_275990.1| - 0.032 12.9 1.5 1.3 7.7 0.7 2.7 3 0 0 3 3 3 0 HI0933-like protein ApbA PF02558.16 gi|15678873|ref|NP_275990.1| - 0.041 13.5 0.1 0.075 12.7 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Fer4 PF00037.27 gi|15678873|ref|NP_275990.1| - 0.044 13.6 2.0 0.078 12.8 2.0 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15678873|ref|NP_275990.1| - 0.055 13.6 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain TrkA_N PF02254.18 gi|15678873|ref|NP_275990.1| - 0.06 13.6 0.2 1.3 9.3 0.1 2.4 2 0 0 2 2 2 0 TrkA-N domain Lycopene_cycl PF05834.12 gi|15678873|ref|NP_275990.1| - 0.071 12.1 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Fer4 PF00037.27 gi|15678874|ref|NP_275991.1| - 1.1e-14 53.6 17.4 1.9e-07 30.6 6.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678874|ref|NP_275991.1| - 2.3e-12 47.3 6.9 2.9e-06 27.8 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678874|ref|NP_275991.1| - 2.4e-11 43.0 11.4 2.1e-05 24.4 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678874|ref|NP_275991.1| - 3.8e-11 42.6 13.2 1.2e-05 25.1 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15678874|ref|NP_275991.1| - 2.8e-10 40.2 21.8 8.2e-07 29.1 12.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678874|ref|NP_275991.1| - 6.2e-09 35.9 27.7 1.9e-07 31.1 14.3 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678874|ref|NP_275991.1| - 1e-08 35.1 12.2 0.00016 21.8 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain NIL PF09383.10 gi|15678874|ref|NP_275991.1| - 8.7e-08 31.9 0.0 1.3e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 NIL domain Fer4_16 PF13484.6 gi|15678874|ref|NP_275991.1| - 4.3e-07 30.8 11.6 0.0018 19.1 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|15678874|ref|NP_275991.1| - 6.5e-07 29.7 6.1 0.0064 16.9 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678874|ref|NP_275991.1| - 1.1e-06 28.6 15.4 0.0023 18.3 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678874|ref|NP_275991.1| - 1.2e-05 25.7 10.5 0.0029 18.1 1.8 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15678874|ref|NP_275991.1| - 2.5e-05 24.9 18.6 0.014 16.3 4.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678874|ref|NP_275991.1| - 0.00022 21.7 9.7 0.1 13.2 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15678874|ref|NP_275991.1| - 0.0012 19.1 13.1 0.011 16.0 13.1 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15678874|ref|NP_275991.1| - 0.029 15.1 17.6 0.49 11.2 3.4 3.0 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15678874|ref|NP_275991.1| - 0.29 12.0 15.4 3.6 8.5 4.1 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain HcyBio PF01837.16 gi|15678875|ref|NP_275992.1| - 2e-156 520.2 0.0 2.7e-156 519.8 0.0 1.2 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|15678875|ref|NP_275992.1| - 5.3e-26 90.8 9.9 3.6e-13 49.7 1.4 3.0 3 0 0 3 3 3 2 CBS domain PmbA_TldD PF01523.16 gi|15678876|ref|NP_275993.1| - 4.4e-66 223.6 0.8 6.1e-66 223.1 0.8 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase AMMECR1 PF01871.17 gi|15678877|ref|NP_275994.1| - 2.7e-55 186.5 0.0 3e-55 186.3 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 NOG1_N PF17835.1 gi|15678878|ref|NP_275995.1| - 8.6e-43 146.1 0.2 1.8e-42 145.0 0.2 1.5 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|15678878|ref|NP_275995.1| - 3e-22 78.2 0.1 5.1e-22 77.4 0.1 1.4 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|15678878|ref|NP_275995.1| - 6.9e-22 77.7 0.0 1.2e-21 76.9 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|15678878|ref|NP_275995.1| - 5.7e-15 55.2 0.0 9e-15 54.5 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|15678878|ref|NP_275995.1| - 1.1e-05 25.4 0.1 0.15 12.0 0.0 2.8 2 1 0 2 2 2 2 RsgA GTPase PduV-EutP PF10662.9 gi|15678878|ref|NP_275995.1| - 1.2e-05 25.1 0.1 3.4e-05 23.6 0.1 1.8 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.27 gi|15678878|ref|NP_275995.1| - 4.3e-05 23.1 0.0 0.002 17.7 0.0 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|15678878|ref|NP_275995.1| - 0.0017 17.7 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|15678878|ref|NP_275995.1| - 0.0026 17.8 0.2 0.42 10.6 0.1 2.5 1 1 1 2 2 2 1 Dynamin family ATP_bind_1 PF03029.17 gi|15678878|ref|NP_275995.1| - 0.0044 16.8 0.0 0.052 13.3 0.0 2.2 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|15678878|ref|NP_275995.1| - 0.017 14.7 0.1 2.2 7.8 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Arf PF00025.21 gi|15678878|ref|NP_275995.1| - 0.019 14.4 1.0 0.25 10.8 0.3 2.8 2 1 0 2 2 2 0 ADP-ribosylation factor family MeaB PF03308.16 gi|15678878|ref|NP_275995.1| - 0.059 12.3 0.1 2.6 6.9 0.0 2.6 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB HSP20 PF00011.21 gi|15678879|ref|NP_275996.1| - 7.9e-18 64.5 4.1 1.3e-17 63.8 4.1 1.3 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|15678879|ref|NP_275996.1| - 2.4e-12 46.2 0.1 4.3e-12 45.4 0.1 1.5 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|15678879|ref|NP_275996.1| - 2.7e-05 25.1 2.7 3.9e-05 24.6 2.3 1.5 1 1 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|15678879|ref|NP_275996.1| - 0.0013 18.8 5.2 0.12 12.4 0.6 2.9 3 1 0 3 3 3 2 FKBP26_C-terminal SIS PF01380.22 gi|15678880|ref|NP_275997.1| - 3.4e-21 75.5 0.0 7.9e-17 61.3 0.1 2.1 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 gi|15678880|ref|NP_275997.1| - 0.018 15.1 0.0 0.14 12.2 0.0 2.3 1 1 1 2 2 2 0 SIS domain DUF3238 PF11579.8 gi|15678880|ref|NP_275997.1| - 0.034 13.9 0.0 0.054 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3238) bact-PGI_C PF10432.9 gi|15678880|ref|NP_275997.1| - 0.069 13.2 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial phospho-glucose isomerase C-terminal SIS domain IF3_N PF05198.16 gi|15678880|ref|NP_275997.1| - 0.14 12.4 0.0 8.6 6.7 0.0 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-3, N-terminal domain ThiP_synth PF10120.9 gi|15678881|ref|NP_275998.1| - 7.2e-63 211.1 0.0 8.2e-63 210.9 0.0 1.0 1 0 0 1 1 1 1 Thiamine-phosphate synthase DUF2124 PF09897.9 gi|15678882|ref|NP_275999.1| - 5.1e-50 169.0 0.0 5.8e-50 168.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) DJ-1_PfpI PF01965.24 gi|15678882|ref|NP_275999.1| - 0.0035 17.2 0.0 0.0047 16.7 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family Phage_int_SAM_6 PF18644.1 gi|15678882|ref|NP_275999.1| - 0.16 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Phage integrase SAM-like domain DUF447 PF04289.12 gi|15678883|ref|NP_276000.1| - 4.6e-48 163.3 0.1 5.4e-48 163.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) HTH_20 PF12840.7 gi|15678884|ref|NP_276001.1| - 5.9e-06 26.3 0.1 1e-05 25.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15678884|ref|NP_276001.1| - 8.7e-06 25.5 0.8 1.6e-05 24.7 0.2 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|15678884|ref|NP_276001.1| - 0.00027 20.8 1.4 0.00027 20.8 1.4 2.7 4 0 0 4 4 4 1 Winged helix-turn-helix Rio2_N PF09202.11 gi|15678884|ref|NP_276001.1| - 0.0096 16.1 1.6 0.024 14.9 0.1 2.3 3 0 0 3 3 3 1 Rio2, N-terminal HTH_24 PF13412.6 gi|15678884|ref|NP_276001.1| - 0.028 14.0 0.1 0.085 12.4 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF2524 PF10732.9 gi|15678884|ref|NP_276001.1| - 0.038 14.3 3.1 0.08 13.2 0.5 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2524) CREPT PF16566.5 gi|15678884|ref|NP_276001.1| - 0.12 12.5 7.7 0.5 10.5 0.1 2.7 2 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF3134 PF11332.8 gi|15678884|ref|NP_276001.1| - 0.34 11.3 0.1 0.34 11.3 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3134) MTH865 PF07747.11 gi|15678885|ref|NP_276002.1| - 5.8e-31 106.1 0.1 6.5e-31 105.9 0.1 1.0 1 0 0 1 1 1 1 MTH865-like family Adenine_deam_C PF13382.6 gi|15678886|ref|NP_276003.1| - 9.4e-62 207.3 0.1 1.7e-61 206.5 0.1 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|15678886|ref|NP_276003.1| - 1.3e-44 152.9 0.2 3.3e-43 148.3 0.2 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15678886|ref|NP_276003.1| - 7.5e-09 35.6 2.3 3.5e-06 26.8 0.1 2.3 2 0 0 2 2 2 2 Amidohydrolase family SnoaL_2 PF12680.7 gi|15678886|ref|NP_276003.1| - 0.14 12.8 0.3 1.8 9.3 0.1 2.8 2 2 0 2 2 2 0 SnoaL-like domain Caps_synth PF05704.12 gi|15678886|ref|NP_276003.1| - 0.32 10.3 0.0 0.46 9.8 0.0 1.1 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein Saccharop_dh_N PF04455.12 gi|15678887|ref|NP_276004.1| - 6.9e-38 129.1 0.0 2.3e-37 127.4 0.0 1.9 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region TPP_enzyme_M PF00205.22 gi|15678887|ref|NP_276004.1| - 0.001 18.8 0.1 0.0019 17.9 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DS PF01916.17 gi|15678887|ref|NP_276004.1| - 0.028 13.7 1.2 0.54 9.5 0.0 2.7 2 1 0 3 3 3 0 Deoxyhypusine synthase Arginase PF00491.21 gi|15678888|ref|NP_276005.1| - 3.3e-65 220.4 0.3 4.4e-65 220.0 0.3 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 gi|15678888|ref|NP_276005.1| - 0.047 13.9 0.1 0.069 13.4 0.1 1.2 1 0 0 1 1 1 0 UPF0489 domain eIF-5a PF01287.20 gi|15678889|ref|NP_276006.1| - 4.8e-08 33.0 0.3 7.8e-08 32.3 0.3 1.4 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold PvlArgDC PF01862.16 gi|15678890|ref|NP_276007.1| - 9.4e-41 139.3 0.5 1e-40 139.2 0.5 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Inositol_P PF00459.25 gi|15678891|ref|NP_276008.1| - 5.9e-35 121.1 0.0 7.8e-35 120.7 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|15678891|ref|NP_276008.1| - 3.2e-05 23.5 0.0 5e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain NAD_kinase PF01513.21 gi|15678892|ref|NP_276009.1| - 3.6e-80 269.3 0.7 6.4e-80 268.5 0.7 1.4 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|15678892|ref|NP_276009.1| - 2.9e-05 23.7 0.0 6.6e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain PK_C PF02887.16 gi|15678892|ref|NP_276009.1| - 0.11 12.8 0.0 0.26 11.5 0.0 1.7 1 1 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Mur_ligase_M PF08245.12 gi|15678893|ref|NP_276010.1| - 9.7e-07 29.0 0.0 2.1e-06 27.9 0.0 1.6 1 1 0 1 1 1 1 Mur ligase middle domain Porphobil_deam PF01379.20 gi|15678894|ref|NP_276011.1| - 1.7e-70 236.7 0.0 2e-70 236.4 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|15678894|ref|NP_276011.1| - 1.2e-20 73.6 1.0 2.7e-20 72.5 1.0 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain GFO_IDH_MocA PF01408.22 gi|15678895|ref|NP_276012.1| - 7.1e-31 107.5 0.2 1.3e-30 106.7 0.2 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|15678895|ref|NP_276012.1| - 2.2e-10 40.5 0.2 1.1e-09 38.3 0.0 2.2 2 1 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_2 PF03446.15 gi|15678895|ref|NP_276012.1| - 0.0016 18.6 0.2 0.0029 17.8 0.2 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|15678895|ref|NP_276012.1| - 0.0044 17.6 0.0 0.0094 16.5 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DUF4798 PF16055.5 gi|15678895|ref|NP_276012.1| - 0.08 13.2 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) 2-Hacid_dh_C PF02826.19 gi|15678895|ref|NP_276012.1| - 0.083 12.2 0.1 0.14 11.5 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|15678895|ref|NP_276012.1| - 0.086 13.5 0.1 0.16 12.6 0.1 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Pribosyltran PF00156.27 gi|15678896|ref|NP_276013.1| - 9e-21 74.0 2.6 1.5e-20 73.4 2.6 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|15678896|ref|NP_276013.1| - 0.00011 21.7 0.1 0.00017 21.1 0.1 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|15678896|ref|NP_276013.1| - 0.0012 18.4 0.3 0.0026 17.3 0.2 1.4 1 1 0 1 1 1 1 Phosphoribosyl transferase HTH_11 PF08279.12 gi|15678896|ref|NP_276013.1| - 0.0037 17.2 0.3 0.04 13.9 0.0 2.3 2 0 0 2 2 2 1 HTH domain Pribosyl_synth PF14572.6 gi|15678896|ref|NP_276013.1| - 0.0052 16.8 0.1 0.0076 16.3 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain HTH_23 PF13384.6 gi|15678896|ref|NP_276013.1| - 0.0075 16.0 0.0 0.018 14.8 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain PDZ_6 PF17820.1 gi|15678896|ref|NP_276013.1| - 0.0083 16.0 0.8 0.54 10.1 0.3 2.6 3 0 0 3 3 3 1 PDZ domain FeThRed_A PF02941.15 gi|15678896|ref|NP_276013.1| - 0.015 15.4 0.1 0.028 14.5 0.1 1.5 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase variable alpha chain Nucleo_LEF-12 PF06256.11 gi|15678896|ref|NP_276013.1| - 0.019 14.7 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein GerE PF00196.19 gi|15678896|ref|NP_276013.1| - 0.066 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF1918 PF08940.11 gi|15678896|ref|NP_276013.1| - 0.067 12.8 0.2 0.13 11.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1918) BNR_6 PF15899.5 gi|15678896|ref|NP_276013.1| - 0.1 12.7 0.0 4.8 7.5 0.0 2.6 2 0 0 2 2 2 0 BNR-Asp box repeat HTH_7 PF02796.15 gi|15678896|ref|NP_276013.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_17 PF12728.7 gi|15678896|ref|NP_276013.1| - 0.12 12.6 0.0 0.38 11.0 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|15678896|ref|NP_276013.1| - 0.14 11.9 0.1 0.52 10.1 0.0 1.9 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain UbiA PF01040.18 gi|15678897|ref|NP_276014.1| - 1.6e-13 50.6 18.2 2.3e-13 50.0 18.2 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family eRF1_2 PF03464.15 gi|15678898|ref|NP_276015.1| - 7.1e-49 165.5 1.0 8.5e-49 165.3 0.0 1.6 2 0 0 2 2 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|15678898|ref|NP_276015.1| - 2.4e-36 124.7 0.1 6e-36 123.4 0.1 1.7 1 0 0 1 1 1 1 eRF1 domain 3 baeRF_family10 PF18854.1 gi|15678898|ref|NP_276015.1| - 7.3e-18 65.2 0.0 1.7e-17 64.0 0.0 1.6 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|15678898|ref|NP_276015.1| - 1.1e-14 54.5 0.0 1.9e-14 53.8 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|15678898|ref|NP_276015.1| - 3.6e-14 53.2 0.0 1.2e-13 51.5 0.0 1.9 2 0 0 2 2 1 1 Actinobacteria/chloroflexi VLRF1 release factor Zn-ribbon_8 PF09723.10 gi|15678898|ref|NP_276015.1| - 0.00014 21.9 2.6 0.00014 21.9 2.6 2.5 2 0 0 2 2 2 1 Zinc ribbon domain baeRF_family12 PF18856.1 gi|15678898|ref|NP_276015.1| - 0.00018 22.1 0.1 0.00063 20.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 12 HypA PF01155.19 gi|15678898|ref|NP_276015.1| - 0.015 15.3 0.0 0.031 14.3 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PrkA PF06798.12 gi|15678898|ref|NP_276015.1| - 0.02 14.5 0.4 0.37 10.4 0.0 2.5 3 0 0 3 3 3 0 PrkA serine protein kinase C-terminal domain DZR PF12773.7 gi|15678898|ref|NP_276015.1| - 0.026 14.5 1.0 0.045 13.8 1.0 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-TFIIB PF13453.6 gi|15678898|ref|NP_276015.1| - 0.044 13.1 1.8 0.65 9.4 2.0 2.3 1 1 1 2 2 2 0 Transcription factor zinc-finger Zn_Tnp_IS1595 PF12760.7 gi|15678898|ref|NP_276015.1| - 0.058 13.4 0.2 3.8 7.6 0.1 2.5 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf_UBZ PF18439.1 gi|15678898|ref|NP_276015.1| - 0.14 11.7 1.5 9.5 5.9 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF3300 PF11737.8 gi|15678898|ref|NP_276015.1| - 0.18 11.3 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3300) Ogr_Delta PF04606.12 gi|15678898|ref|NP_276015.1| - 0.24 11.4 1.0 7.8 6.6 0.0 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger OrfB_Zn_ribbon PF07282.11 gi|15678898|ref|NP_276015.1| - 0.44 10.5 3.1 0.77 9.7 1.2 2.3 3 0 0 3 3 3 0 Putative transposase DNA-binding domain YdjO PF14169.6 gi|15678898|ref|NP_276015.1| - 0.6 9.9 3.1 30 4.4 0.1 3.1 2 1 1 3 3 3 0 Cold-inducible protein YdjO DUF1451 PF07295.11 gi|15678898|ref|NP_276015.1| - 3.9 7.5 6.7 4.6 7.3 2.0 2.8 2 1 0 2 2 2 0 Zinc-ribbon containing domain AA_kinase PF00696.28 gi|15678899|ref|NP_276016.1| - 1.5e-27 96.8 0.0 7.6e-27 94.4 0.0 1.8 1 1 0 1 1 1 1 Amino acid kinase family DUF2116 PF09889.9 gi|15678900|ref|NP_276017.1| - 2e-28 98.1 1.8 2.4e-28 97.9 1.8 1.1 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) UPF0547 PF10571.9 gi|15678900|ref|NP_276017.1| - 0.012 15.6 4.5 0.036 14.1 4.5 1.7 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 DUF2256 PF10013.9 gi|15678900|ref|NP_276017.1| - 0.035 14.2 4.1 1.6 8.9 0.3 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) Sec20 PF03908.13 gi|15678900|ref|NP_276017.1| - 0.038 13.9 0.3 0.048 13.6 0.3 1.1 1 0 0 1 1 1 0 Sec20 Rad50_zn_hook PF04423.14 gi|15678900|ref|NP_276017.1| - 0.089 12.6 2.8 0.41 10.5 2.8 1.8 1 1 0 1 1 1 0 Rad50 zinc hook motif YacG PF03884.14 gi|15678900|ref|NP_276017.1| - 0.23 11.2 5.2 0.6 9.9 5.2 1.6 1 1 0 1 1 1 0 DNA gyrase inhibitor YacG Auto_anti-p27 PF06677.12 gi|15678900|ref|NP_276017.1| - 1.6 9.0 6.0 25 5.1 6.6 2.0 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF308 PF03729.13 gi|15678901|ref|NP_276018.1| - 2.3e-08 34.3 17.5 2.3e-08 34.3 17.5 3.2 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) YiaAB PF05360.14 gi|15678901|ref|NP_276018.1| - 0.0086 16.3 4.6 0.0086 16.3 4.6 4.1 3 2 1 4 4 4 1 yiaA/B two helix domain TauE PF01925.19 gi|15678902|ref|NP_276019.1| - 3.2e-48 164.4 44.2 3.9e-48 164.2 44.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE UPF0016 PF01169.19 gi|15678902|ref|NP_276019.1| - 0.043 14.1 0.4 0.043 14.1 0.4 4.5 3 1 1 4 4 4 0 Uncharacterized protein family UPF0016 Glyco_trans_1_3 PF13528.6 gi|15678904|ref|NP_276021.1| - 9.8e-107 356.9 0.1 1.3e-106 356.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 1 Glycos_transf_2 PF00535.26 gi|15678904|ref|NP_276021.1| - 1.6e-28 99.7 0.2 2.2e-27 96.0 0.0 2.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15678904|ref|NP_276021.1| - 5e-12 46.2 0.0 1.4e-11 44.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15678904|ref|NP_276021.1| - 5.9e-09 35.8 0.0 1.4e-06 28.0 0.0 2.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tran_28_C PF04101.16 gi|15678904|ref|NP_276021.1| - 1.6e-05 24.9 0.0 3.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_tranf_2_4 PF13704.6 gi|15678904|ref|NP_276021.1| - 0.00027 21.4 0.1 0.00091 19.7 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|15678904|ref|NP_276021.1| - 0.00074 19.0 0.0 0.0015 18.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|15678904|ref|NP_276021.1| - 0.0043 17.0 0.0 0.01 15.7 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_4 PF13439.6 gi|15678904|ref|NP_276021.1| - 0.041 13.9 0.0 0.1 12.6 0.0 1.7 1 0 0 1 1 1 0 Glycosyltransferase Family 4 TFIIB PF00382.19 gi|15678905|ref|NP_276022.1| - 6.2e-43 144.7 0.9 2.3e-20 72.4 0.3 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|15678905|ref|NP_276022.1| - 1.3e-17 63.0 1.5 1.3e-17 63.0 1.5 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|15678905|ref|NP_276022.1| - 0.00029 20.3 0.1 0.056 13.0 0.1 2.9 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_C PF02984.19 gi|15678905|ref|NP_276022.1| - 0.0023 18.0 0.0 0.096 12.8 0.0 2.2 1 1 1 2 2 2 1 Cyclin, C-terminal domain Lar_restr_allev PF14354.6 gi|15678905|ref|NP_276022.1| - 0.017 15.5 0.6 0.51 10.7 0.3 2.3 2 0 0 2 2 2 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.11 gi|15678905|ref|NP_276022.1| - 0.022 14.7 0.3 0.055 13.4 0.3 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HTH_AsnC-type PF13404.6 gi|15678905|ref|NP_276022.1| - 0.031 14.1 0.4 0.39 10.6 0.0 2.7 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15678905|ref|NP_276022.1| - 0.056 13.1 0.3 0.93 9.2 0.0 2.9 3 0 0 3 3 3 0 Sigma-70, region 4 LacI PF00356.21 gi|15678905|ref|NP_276022.1| - 0.099 12.4 0.7 6.4 6.7 0.2 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_Crp_2 PF13545.6 gi|15678905|ref|NP_276022.1| - 0.12 12.3 0.2 23 5.0 0.0 3.2 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain RPA_interact_C PF14768.6 gi|15678905|ref|NP_276022.1| - 0.14 12.8 0.1 4.5 7.9 0.0 2.3 2 0 0 2 2 2 0 Replication protein A interacting C-terminal Zn-ribbon_8 PF09723.10 gi|15678905|ref|NP_276022.1| - 0.14 12.3 5.3 0.18 12.0 0.5 2.8 2 1 1 3 3 3 0 Zinc ribbon domain UPF0181 PF03701.14 gi|15678905|ref|NP_276022.1| - 0.15 11.7 0.1 0.31 10.7 0.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) Gar1 PF04410.14 gi|15678906|ref|NP_276023.1| - 2.5e-12 46.9 0.0 2.7e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region PRC PF05239.16 gi|15678906|ref|NP_276023.1| - 0.00015 21.8 0.0 0.00025 21.1 0.0 1.7 1 1 0 1 1 1 1 PRC-barrel domain DUF2171 PF09939.9 gi|15678906|ref|NP_276023.1| - 0.11 12.8 0.0 0.29 11.5 0.0 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2171) LPG_synthase_TM PF03706.13 gi|15678907|ref|NP_276024.1| - 3.7e-56 190.9 35.3 4.3e-56 190.7 35.3 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region RraA-like PF03737.15 gi|15678908|ref|NP_276025.1| - 2e-40 138.4 0.8 3e-40 137.8 0.8 1.2 1 0 0 1 1 1 1 Aldolase/RraA DUF211 PF02680.14 gi|15678909|ref|NP_276026.1| - 3.5e-38 129.6 0.9 3.9e-38 129.5 0.9 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Toprim PF01751.22 gi|15678910|ref|NP_276027.1| - 9e-07 29.1 0.0 1.4e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Toprim domain Toprim_4 PF13662.6 gi|15678910|ref|NP_276027.1| - 5.6e-06 26.7 0.0 8.3e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|15678910|ref|NP_276027.1| - 0.0098 16.3 0.0 0.013 15.9 0.0 1.3 1 0 0 1 1 1 1 Toprim-like Toprim_3 PF13362.6 gi|15678910|ref|NP_276027.1| - 0.038 14.4 0.0 0.048 14.0 0.0 1.2 1 0 0 1 1 1 0 Toprim domain Toprim_4 PF13662.6 gi|15678911|ref|NP_276028.1| - 3.9e-11 43.3 0.3 1.2e-10 41.7 0.3 1.9 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|15678911|ref|NP_276028.1| - 1.3e-05 25.6 0.0 3.5e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|15678911|ref|NP_276028.1| - 0.0067 16.6 2.3 0.042 14.1 0.2 3.1 2 2 0 2 2 2 1 Toprim domain Mg_chelatase PF01078.21 gi|15678912|ref|NP_276029.1| - 1.1e-13 51.1 0.1 4.2e-08 32.8 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_32 PF13654.6 gi|15678912|ref|NP_276029.1| - 2.7e-10 39.7 0.0 7.3e-06 25.0 0.1 3.1 3 0 0 3 3 3 2 AAA domain Sigma54_activat PF00158.26 gi|15678912|ref|NP_276029.1| - 1.3e-09 38.0 0.0 0.00052 19.8 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain RuvB_N PF05496.12 gi|15678912|ref|NP_276029.1| - 4.4e-08 33.0 0.2 0.0082 15.9 0.0 2.9 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|15678912|ref|NP_276029.1| - 5.8e-07 29.6 0.0 0.00037 20.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|15678912|ref|NP_276029.1| - 1.7e-06 28.5 0.0 0.0023 18.4 0.0 2.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15678912|ref|NP_276029.1| - 3.9e-05 24.0 0.0 0.0034 17.7 0.0 3.0 3 0 0 3 3 3 1 AAA domain MCM PF00493.23 gi|15678912|ref|NP_276029.1| - 0.00018 20.7 0.0 0.17 11.0 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain AAA_16 PF13191.6 gi|15678912|ref|NP_276029.1| - 0.00051 20.5 0.0 0.0021 18.5 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain DUF2072 PF09845.9 gi|15678912|ref|NP_276029.1| - 0.0039 17.5 0.1 0.011 16.0 0.1 1.8 1 0 0 1 1 1 1 Zn-ribbon containing protein ABC_tran PF00005.27 gi|15678912|ref|NP_276029.1| - 0.0049 17.4 0.0 0.015 15.8 0.0 1.8 1 1 0 1 1 1 1 ABC transporter AAA_14 PF13173.6 gi|15678912|ref|NP_276029.1| - 0.0053 16.8 0.0 4.5 7.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|15678912|ref|NP_276029.1| - 0.0058 16.2 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|15678912|ref|NP_276029.1| - 0.0077 16.0 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 gi|15678912|ref|NP_276029.1| - 0.0089 15.3 0.1 0.83 8.8 0.0 2.7 3 0 0 3 3 3 1 TIP49 P-loop domain HypA PF01155.19 gi|15678912|ref|NP_276029.1| - 0.048 13.7 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sigma54_activ_2 PF14532.6 gi|15678912|ref|NP_276029.1| - 0.065 13.3 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 1 0 Sigma-54 interaction domain MCM_lid PF17855.1 gi|15678912|ref|NP_276029.1| - 0.074 13.5 0.2 0.17 12.3 0.2 1.6 1 0 0 1 1 1 0 MCM AAA-lid domain Thioredoxin_15 PF18403.1 gi|15678912|ref|NP_276029.1| - 0.074 13.0 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain NACHT PF05729.12 gi|15678912|ref|NP_276029.1| - 0.078 12.9 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 NACHT domain DUF1272 PF06906.11 gi|15678912|ref|NP_276029.1| - 0.11 12.6 0.3 0.21 11.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) DZR PF12773.7 gi|15678912|ref|NP_276029.1| - 0.15 12.1 0.4 0.27 11.3 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon SMC_N PF02463.19 gi|15678912|ref|NP_276029.1| - 0.16 11.3 0.0 0.53 9.7 0.0 1.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Zn_Tnp_IS1595 PF12760.7 gi|15678912|ref|NP_276029.1| - 0.77 9.8 4.2 1.1 9.3 0.4 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15678912|ref|NP_276029.1| - 0.92 9.3 3.7 1.7 8.4 3.7 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Phage_integrase PF00589.22 gi|15678913|ref|NP_276030.1| - 6.8e-49 166.0 0.2 1.1e-48 165.3 0.2 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|15678913|ref|NP_276030.1| - 6.5e-05 23.3 3.6 0.00012 22.4 2.1 2.3 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|15678913|ref|NP_276030.1| - 0.00058 20.1 0.2 0.01 16.1 0.1 2.8 2 1 1 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|15678913|ref|NP_276030.1| - 0.0043 17.4 4.3 0.0043 17.4 4.3 2.2 2 1 0 2 2 2 1 Phage integrase SAM-like domain DUF3435 PF11917.8 gi|15678913|ref|NP_276030.1| - 0.016 14.2 0.1 0.026 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Phage_integr_3 PF16795.5 gi|15678913|ref|NP_276030.1| - 0.067 13.1 7.1 0.11 12.4 0.5 3.1 1 1 0 2 2 2 0 Archaeal phage integrase PPP5 PF08321.12 gi|15678913|ref|NP_276030.1| - 0.45 10.8 2.6 16 5.9 0.0 2.8 2 1 0 2 2 2 0 PPP5 TPR repeat region ArsP_1 PF03773.13 gi|15678914|ref|NP_276031.1| - 2.5e-99 332.2 18.4 2.8e-99 332.0 18.4 1.0 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.6 gi|15678915|ref|NP_276032.1| - 4.5e-24 84.3 0.2 4.9e-24 84.2 0.2 1.0 1 0 0 1 1 1 1 Thioredoxin domain ArsD PF06953.11 gi|15678915|ref|NP_276032.1| - 0.011 16.0 0.1 0.017 15.5 0.1 1.5 1 1 1 2 2 2 0 Arsenical resistance operon trans-acting repressor ArsD PTS_IIB PF02302.17 gi|15678915|ref|NP_276032.1| - 0.059 14.1 0.2 0.072 13.8 0.2 1.3 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit FdhE PF04216.12 gi|15678916|ref|NP_276033.1| - 0.091 12.6 2.8 0.1 12.5 2.8 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation F420_oxidored PF03807.17 gi|15678917|ref|NP_276034.1| - 3.4e-16 59.6 0.0 7.8e-16 58.4 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent P5CR_dimer PF14748.6 gi|15678917|ref|NP_276034.1| - 4.2e-05 23.8 0.1 6.4e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation Sacchrp_dh_NADP PF03435.18 gi|15678917|ref|NP_276034.1| - 0.015 15.5 0.0 0.024 14.9 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Usp PF00582.26 gi|15678918|ref|NP_276035.1| - 1.4e-38 132.6 2.3 1.6e-38 132.4 2.3 1.0 1 0 0 1 1 1 1 Universal stress protein family PAS_2 PF08446.11 gi|15678918|ref|NP_276035.1| - 0.0057 17.3 0.0 0.0083 16.8 0.0 1.2 1 0 0 1 1 1 1 PAS fold DUF150_C PF17384.2 gi|15678918|ref|NP_276035.1| - 0.094 12.9 0.1 0.15 12.2 0.1 1.4 1 0 0 1 1 1 0 RimP C-terminal SH3 domain Imm61 PF15598.6 gi|15678918|ref|NP_276035.1| - 0.12 12.3 0.1 1 9.3 0.0 2.1 1 1 0 2 2 2 0 Immunity protein 61 HTH_5 PF01022.20 gi|15678919|ref|NP_276036.1| - 8.1e-22 76.8 0.1 1.2e-21 76.3 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15678919|ref|NP_276036.1| - 2e-11 43.8 0.1 3e-11 43.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|15678919|ref|NP_276036.1| - 0.0023 17.8 0.0 0.0034 17.2 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|15678919|ref|NP_276036.1| - 0.0052 16.5 0.0 0.022 14.5 0.0 2.0 1 1 0 2 2 2 1 Homeodomain-like domain HTH_34 PF13601.6 gi|15678919|ref|NP_276036.1| - 0.036 14.3 0.0 0.08 13.1 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|15678919|ref|NP_276036.1| - 0.078 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 gi|15678919|ref|NP_276036.1| - 0.13 12.6 0.0 0.42 11.0 0.0 1.8 2 0 0 2 2 2 0 Penicillinase repressor Rrf2 PF02082.20 gi|15678919|ref|NP_276036.1| - 0.17 12.3 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator SBF PF01758.16 gi|15678920|ref|NP_276037.1| - 2e-72 243.0 10.8 2e-72 243.0 10.8 2.2 2 0 0 2 2 2 1 Sodium Bile acid symporter family p12I PF12233.8 gi|15678920|ref|NP_276037.1| - 0.48 11.0 9.5 0.086 13.3 4.0 2.6 2 0 0 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein HisKA_2 PF07568.12 gi|15678921|ref|NP_276038.1| - 2.4e-25 88.4 0.6 6.3e-25 87.1 0.6 1.8 1 0 0 1 1 1 1 Histidine kinase Response_reg PF00072.24 gi|15678921|ref|NP_276038.1| - 4.1e-22 78.5 0.5 9e-22 77.4 0.5 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 gi|15678921|ref|NP_276038.1| - 1.8e-07 31.7 0.1 2.3e-06 28.1 0.0 2.5 1 1 1 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|15678921|ref|NP_276038.1| - 0.0011 19.6 0.0 0.0026 18.4 0.0 1.7 1 1 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|15678921|ref|NP_276038.1| - 0.031 14.2 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain B12-binding PF02310.19 gi|15678921|ref|NP_276038.1| - 0.11 12.5 0.1 0.64 10.1 0.0 2.2 2 1 1 3 3 3 0 B12 binding domain FAM25 PF15825.5 gi|15678921|ref|NP_276038.1| - 0.12 12.8 0.8 0.38 11.1 0.0 2.2 4 0 0 4 4 4 0 FAM25 family YmzC PF14157.6 gi|15678921|ref|NP_276038.1| - 0.2 11.8 1.1 0.42 10.7 0.2 2.0 2 0 0 2 2 2 0 YmzC-like protein HisKA_2 PF07568.12 gi|15678922|ref|NP_276039.1| - 8e-29 99.5 2.9 8e-29 99.5 2.9 2.3 3 0 0 3 3 3 1 Histidine kinase Response_reg PF00072.24 gi|15678922|ref|NP_276039.1| - 5.8e-18 65.1 0.0 1.4e-17 63.8 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain PAS_3 PF08447.12 gi|15678922|ref|NP_276039.1| - 3e-14 53.1 0.0 8.4e-14 51.6 0.0 1.8 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 gi|15678922|ref|NP_276039.1| - 4.5e-09 36.8 0.3 1.7e-08 34.9 0.3 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|15678922|ref|NP_276039.1| - 1e-08 35.3 0.0 3.7e-08 33.6 0.0 2.0 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|15678922|ref|NP_276039.1| - 4.6e-07 29.8 0.0 1.7e-06 28.0 0.0 2.0 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|15678922|ref|NP_276039.1| - 2e-06 27.8 0.1 3.9e-06 26.8 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|15678922|ref|NP_276039.1| - 1.4e-05 25.7 0.1 3.7e-05 24.3 0.1 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_4 PF08448.10 gi|15678922|ref|NP_276039.1| - 0.016 15.4 0.0 0.038 14.2 0.0 1.6 1 0 0 1 1 1 0 PAS fold Cadherin_5 PF17892.1 gi|15678922|ref|NP_276039.1| - 0.25 11.3 0.6 7.3 6.6 0.0 2.6 3 0 0 3 3 3 0 Cadherin-like domain SPOB_a PF14689.6 gi|15678922|ref|NP_276039.1| - 0.72 9.6 3.3 0.45 10.2 0.1 2.3 3 0 0 3 3 3 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF523 PF04463.12 gi|15678923|ref|NP_276040.1| - 1.3e-35 122.4 0.0 2e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF523) DUF1722 PF08349.11 gi|15678923|ref|NP_276040.1| - 2.6e-26 92.2 0.0 3.8e-26 91.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DNA_photolyase PF00875.18 gi|15678924|ref|NP_276041.1| - 1.3e-27 96.9 0.1 1.7e-26 93.2 0.1 2.3 2 0 0 2 2 2 1 DNA photolyase AP_endonuc_2 PF01261.24 gi|15678924|ref|NP_276041.1| - 0.0019 17.7 0.0 0.0088 15.5 0.0 1.9 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel BioY PF02632.14 gi|15678925|ref|NP_276042.1| - 2.1e-28 99.1 12.1 2.3e-28 98.9 12.1 1.0 1 0 0 1 1 1 1 BioY family ABC2_membrane_3 PF12698.7 gi|15678925|ref|NP_276042.1| - 0.51 9.4 5.6 0.57 9.2 5.6 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF1284 PF06935.11 gi|15678926|ref|NP_276043.1| - 2.3e-25 89.0 0.0 2.8e-25 88.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) zn-ribbon_14 PF16503.5 gi|15678926|ref|NP_276043.1| - 0.3 10.6 0.1 0.3 10.6 0.1 2.0 2 0 0 2 2 2 0 Zinc-ribbon Aldo_ket_red PF00248.21 gi|15678927|ref|NP_276044.1| - 5e-15 55.5 0.0 2.1e-13 50.1 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|15678927|ref|NP_276044.1| - 1.1e-07 32.3 7.0 3.4e-07 30.7 7.2 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678927|ref|NP_276044.1| - 0.00022 21.3 8.1 0.0052 16.9 9.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678927|ref|NP_276044.1| - 0.011 15.8 6.6 0.03 14.4 6.7 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15678927|ref|NP_276044.1| - 0.014 15.8 8.7 0.067 13.7 8.9 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15678927|ref|NP_276044.1| - 0.03 14.1 5.1 0.15 11.8 0.4 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NADH_4Fe-4S PF10589.9 gi|15678927|ref|NP_276044.1| - 0.11 12.5 0.4 0.11 12.5 0.4 2.5 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TrmB PF01978.19 gi|15678927|ref|NP_276044.1| - 0.16 11.8 0.0 0.41 10.6 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fer4 PF00037.27 gi|15678927|ref|NP_276044.1| - 0.5 10.3 7.1 1.5 8.8 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain THUMP PF02926.17 gi|15678929|ref|NP_276046.1| - 1.9e-21 76.7 1.1 2.3e-21 76.4 1.1 1.1 1 0 0 1 1 1 1 THUMP domain CHB_HEX_C_1 PF13290.6 gi|15678930|ref|NP_276047.1| - 9.1e-11 41.6 1.6 9.1e-11 41.6 1.6 2.3 2 0 0 2 2 2 1 Chitobiase/beta-hexosaminidase C-terminal domain Fn3_assoc PF13287.6 gi|15678930|ref|NP_276047.1| - 5.6e-10 39.2 6.0 2e-09 37.4 1.4 2.4 2 0 0 2 2 2 2 Fn3 associated Beta_helix PF13229.6 gi|15678931|ref|NP_276048.1| - 7.4e-35 120.1 114.7 5.4e-15 55.6 19.2 5.9 1 1 5 6 6 6 5 Right handed beta helix region NosD PF05048.13 gi|15678931|ref|NP_276048.1| - 2.6e-22 79.2 108.5 3.8e-11 42.7 17.2 4.8 1 1 4 5 5 5 4 Periplasmic copper-binding protein (NosD) Pectate_lyase_3 PF12708.7 gi|15678931|ref|NP_276048.1| - 6.3 6.6 68.5 0.16 11.8 3.7 5.4 2 2 4 6 6 6 0 Pectate lyase superfamily protein Lactamase_B_2 PF12706.7 gi|15678932|ref|NP_276049.1| - 2.5e-07 30.4 0.0 4.4e-06 26.3 0.0 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|15678932|ref|NP_276049.1| - 2.9e-06 27.1 0.0 1e-05 25.4 0.0 1.9 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|15678932|ref|NP_276049.1| - 3.7e-05 23.8 0.6 0.00031 20.8 0.6 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily CHB_HEX_C_1 PF13290.6 gi|15678933|ref|NP_276050.1| - 0.0038 17.2 0.1 0.012 15.7 0.1 1.9 1 0 0 1 1 1 1 Chitobiase/beta-hexosaminidase C-terminal domain PE_PPE_C PF12484.8 gi|15678933|ref|NP_276050.1| - 0.99 10.4 4.9 0.47 11.4 0.8 2.5 2 1 0 2 2 2 0 Polymorphic PE/PPE proteins C terminal FmdE PF02663.14 gi|15678934|ref|NP_276051.1| - 0.00094 19.2 0.1 0.013 15.6 0.0 2.4 3 0 0 3 3 3 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon APH PF01636.23 gi|15678935|ref|NP_276052.1| - 6.1e-11 42.7 0.0 3.1e-05 24.0 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 gi|15678935|ref|NP_276052.1| - 3.5e-06 26.7 0.0 1.9e-05 24.3 0.0 1.9 1 1 0 1 1 1 1 RIO1 family Choline_kinase PF01633.20 gi|15678935|ref|NP_276052.1| - 5e-06 26.3 3.3 0.0029 17.2 0.0 2.4 1 1 1 2 2 2 2 Choline/ethanolamine kinase EcKinase PF02958.20 gi|15678935|ref|NP_276052.1| - 3.3e-05 23.3 0.3 6.2e-05 22.4 0.1 1.5 2 0 0 2 2 2 1 Ecdysteroid kinase Fructosamin_kin PF03881.14 gi|15678935|ref|NP_276052.1| - 0.025 13.8 0.0 0.059 12.6 0.0 1.6 1 1 0 1 1 1 0 Fructosamine kinase DUF2252 PF10009.9 gi|15678935|ref|NP_276052.1| - 0.061 12.4 0.0 0.079 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) TFX_C PF14601.6 gi|15678936|ref|NP_276053.1| - 1e-23 83.1 0.2 1.4e-23 82.7 0.2 1.2 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term HTH_19 PF12844.7 gi|15678936|ref|NP_276053.1| - 2.2e-05 24.4 0.2 3.4e-05 23.8 0.2 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|15678936|ref|NP_276053.1| - 2.3e-05 23.8 0.4 4.7e-05 22.8 0.4 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|15678936|ref|NP_276053.1| - 0.00053 20.0 0.4 0.00097 19.2 0.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix KORA PF16509.5 gi|15678936|ref|NP_276053.1| - 0.00084 19.6 0.8 0.0035 17.6 0.1 2.1 2 1 0 2 2 2 1 TrfB plasmid transcriptional repressor HTH_38 PF13936.6 gi|15678936|ref|NP_276053.1| - 0.009 15.8 0.4 0.038 13.8 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|15678936|ref|NP_276053.1| - 0.018 15.0 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|15678936|ref|NP_276053.1| - 0.018 14.8 0.2 0.096 12.5 0.1 2.2 2 0 0 2 2 2 0 Homeodomain-like domain HTH_25 PF13413.6 gi|15678936|ref|NP_276053.1| - 0.019 14.8 0.1 0.032 14.1 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|15678936|ref|NP_276053.1| - 0.094 12.8 0.1 0.29 11.3 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.7 gi|15678936|ref|NP_276053.1| - 0.12 12.2 0.1 0.34 10.8 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_31 PF13560.6 gi|15678936|ref|NP_276053.1| - 0.19 12.1 0.1 0.29 11.5 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain FmdE PF02663.14 gi|15678937|ref|NP_276054.1| - 3.1e-25 88.7 0.0 3.9e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Molydop_binding PF01568.21 gi|15678938|ref|NP_276055.1| - 4.1e-12 46.1 0.0 7.9e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain GXGXG PF01493.19 gi|15678938|ref|NP_276055.1| - 8.5e-09 35.3 25.8 2e-05 24.3 18.8 2.9 1 1 0 1 1 1 1 GXGXG motif Molybdopterin PF00384.22 gi|15678939|ref|NP_276056.1| - 5.6e-18 65.1 0.0 2e-17 63.3 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|15678939|ref|NP_276056.1| - 6.2e-06 26.0 0.8 0.0037 17.0 0.0 3.7 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 gi|15678939|ref|NP_276056.1| - 0.028 14.2 0.0 0.054 13.3 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit ABC_tran PF00005.27 gi|15678940|ref|NP_276057.1| - 1.2e-30 106.8 0.0 2.3e-30 105.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|15678940|ref|NP_276057.1| - 3.8e-14 52.7 1.6 2.8e-13 49.9 0.3 2.6 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|15678940|ref|NP_276057.1| - 4.9e-05 23.3 1.0 0.0098 15.7 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15678940|ref|NP_276057.1| - 0.00048 19.6 0.0 0.77 9.2 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain TOBE_2 PF08402.10 gi|15678940|ref|NP_276057.1| - 0.00057 20.0 0.0 0.0014 18.7 0.0 1.7 1 0 0 1 1 1 1 TOBE domain T2SSE PF00437.20 gi|15678940|ref|NP_276057.1| - 0.0092 15.1 0.0 0.016 14.3 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|15678940|ref|NP_276057.1| - 0.015 15.0 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|15678940|ref|NP_276057.1| - 0.027 14.7 0.1 0.36 11.1 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 gi|15678940|ref|NP_276057.1| - 0.043 14.3 0.0 0.068 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|15678940|ref|NP_276057.1| - 0.054 12.9 0.0 0.1 11.9 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI FtsK_SpoIIIE PF01580.18 gi|15678940|ref|NP_276057.1| - 0.055 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|15678940|ref|NP_276057.1| - 0.068 13.4 0.1 0.12 12.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 gi|15678940|ref|NP_276057.1| - 0.074 12.5 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_15 PF13175.6 gi|15678940|ref|NP_276057.1| - 0.075 12.7 0.0 0.18 11.5 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 gi|15678940|ref|NP_276057.1| - 0.097 12.6 0.1 0.27 11.1 0.0 1.8 2 0 0 2 2 2 0 NACHT domain SH3_9 PF14604.6 gi|15678940|ref|NP_276057.1| - 0.18 11.7 0.0 0.96 9.4 0.0 2.3 2 1 0 2 2 2 0 Variant SH3 domain BPD_transp_1 PF00528.22 gi|15678941|ref|NP_276058.1| - 4e-15 56.0 12.6 4e-15 56.0 12.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DctQ PF04290.12 gi|15678941|ref|NP_276058.1| - 2.2 8.2 16.0 0.31 11.0 0.5 3.2 2 1 1 3 3 3 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF364 PF04016.12 gi|15678942|ref|NP_276059.1| - 6.3e-14 51.8 0.0 6.9e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 Putative heavy-metal chelation PS_pyruv_trans PF04230.13 gi|15678942|ref|NP_276059.1| - 0.017 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase SBP_bac_11 PF13531.6 gi|15678944|ref|NP_276061.1| - 2.4e-46 158.3 0.0 2.7e-46 158.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|15678944|ref|NP_276061.1| - 2.5e-10 40.4 0.0 3.4e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_1 PF01547.25 gi|15678944|ref|NP_276061.1| - 2.2e-09 37.7 0.9 8.3e-07 29.2 0.9 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|15678944|ref|NP_276061.1| - 1.4e-06 27.9 0.4 1.8e-06 27.6 0.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 gi|15678944|ref|NP_276061.1| - 0.00028 20.9 1.4 0.00039 20.4 1.4 1.3 1 0 0 1 1 1 1 NMT1/THI5 like SBP_bac_8 PF13416.6 gi|15678944|ref|NP_276061.1| - 0.00046 20.1 2.8 0.0045 16.9 0.1 2.4 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein NIF3 PF01784.18 gi|15678944|ref|NP_276061.1| - 0.028 14.0 0.1 0.047 13.3 0.1 1.4 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) PBP_like PF12727.7 gi|15678944|ref|NP_276061.1| - 0.04 13.0 0.2 0.09 11.9 0.2 1.7 1 1 0 1 1 1 0 PBP superfamily domain UL73_N PF12522.8 gi|15678944|ref|NP_276061.1| - 0.16 11.7 0.3 0.39 10.5 0.3 1.6 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein N terminal DUF364 PF04016.12 gi|15678945|ref|NP_276062.1| - 3.1e-40 137.1 0.0 4e-40 136.8 0.0 1.1 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|15678945|ref|NP_276062.1| - 7.5e-14 51.7 0.0 1.4e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Putative heavy-metal chelation Fer4 PF00037.27 gi|15678946|ref|NP_276063.1| - 5e-55 181.2 76.1 5.4e-09 35.5 2.0 8.5 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15678946|ref|NP_276063.1| - 3.3e-41 139.6 115.2 2.4e-10 40.8 4.1 5.8 2 2 5 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15678946|ref|NP_276063.1| - 1.1e-31 107.6 77.7 6e-06 26.1 1.6 8.4 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15678946|ref|NP_276063.1| - 8.1e-31 105.9 60.7 4.2e-10 39.6 7.2 6.4 5 1 1 6 6 6 6 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15678946|ref|NP_276063.1| - 7e-30 103.0 59.9 1.5e-08 34.7 10.3 6.5 5 2 2 7 7 7 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15678946|ref|NP_276063.1| - 3e-27 94.5 64.4 4.2e-08 33.2 5.1 5.9 3 3 4 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15678946|ref|NP_276063.1| - 5.9e-25 88.0 64.3 0.00016 22.5 11.4 8.0 5 3 3 8 8 8 8 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|15678946|ref|NP_276063.1| - 2.3e-19 68.2 80.1 0.0015 18.5 4.0 8.8 9 0 0 9 9 9 8 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15678946|ref|NP_276063.1| - 9.5e-17 61.2 61.5 4.9e-05 23.7 8.4 7.0 5 3 2 7 7 7 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15678946|ref|NP_276063.1| - 5.1e-10 39.8 74.0 0.0043 17.5 10.1 7.7 2 2 7 9 9 9 7 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678946|ref|NP_276063.1| - 9.2e-10 38.3 81.2 0.019 15.4 1.5 8.7 8 1 0 9 9 9 6 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15678946|ref|NP_276063.1| - 4.3e-06 27.3 106.5 0.01 16.8 5.3 8.6 9 0 0 9 9 8 6 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15678946|ref|NP_276063.1| - 5.7e-05 23.6 74.8 0.62 10.6 2.5 8.4 8 0 0 8 8 8 6 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15678946|ref|NP_276063.1| - 0.00012 22.7 65.5 0.024 15.4 8.5 8.2 6 3 1 7 7 6 4 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|15678946|ref|NP_276063.1| - 0.051 13.8 62.1 3.1 8.0 0.2 7.8 3 1 4 7 7 7 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15678946|ref|NP_276063.1| - 0.12 13.2 72.1 0.18 12.7 0.8 8.1 3 1 9 12 12 10 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15678947|ref|NP_276064.1| - 1.9e-08 33.7 13.1 1.1e-06 28.2 2.7 3.2 2 1 1 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15678947|ref|NP_276064.1| - 4.1e-08 33.0 14.0 1.4e-05 24.9 3.2 2.7 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15678947|ref|NP_276064.1| - 4.4e-06 26.7 9.5 0.00012 22.1 11.0 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15678947|ref|NP_276064.1| - 1.4e-05 24.9 9.4 0.00031 20.6 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15678947|ref|NP_276064.1| - 7.8e-05 23.5 7.1 0.00094 20.1 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15678947|ref|NP_276064.1| - 0.00011 22.3 8.2 0.00061 19.9 8.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15678947|ref|NP_276064.1| - 0.00023 21.7 8.0 0.0026 18.3 1.3 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15678947|ref|NP_276064.1| - 0.0011 19.3 9.3 0.054 14.0 2.0 2.4 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15678947|ref|NP_276064.1| - 0.028 15.3 3.5 0.028 15.3 3.5 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15678947|ref|NP_276064.1| - 0.035 14.6 6.2 0.12 12.9 1.0 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15678947|ref|NP_276064.1| - 0.037 14.1 3.3 0.037 14.1 3.3 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|15678947|ref|NP_276064.1| - 0.17 12.0 5.3 0.46 10.6 5.3 1.7 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_15 PF13459.6 gi|15678947|ref|NP_276064.1| - 0.29 11.9 9.9 1.8 9.3 0.8 2.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain CobN-Mg_chel PF02514.16 gi|15678948|ref|NP_276065.1| - 6e-268 891.9 0.0 1.4e-207 692.0 0.0 2.1 2 0 0 2 2 2 2 CobN/Magnesium Chelatase Exo_endo_phos PF03372.23 gi|15678949|ref|NP_276066.1| - 1.2e-06 28.2 0.0 2.1e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|15678949|ref|NP_276066.1| - 0.0084 16.0 0.0 0.016 15.0 0.0 1.6 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase MotA_ExbB PF01618.16 gi|15678950|ref|NP_276067.1| - 9.4 6.0 9.9 1 9.1 2.3 2.4 2 1 0 2 2 2 0 MotA/TolQ/ExbB proton channel family MarR PF01047.22 gi|15678951|ref|NP_276068.1| - 3.4e-06 26.9 0.0 5.9e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15678951|ref|NP_276068.1| - 6.3e-06 26.0 0.0 1.2e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|15678951|ref|NP_276068.1| - 0.0012 18.8 0.1 0.0024 17.8 0.1 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|15678951|ref|NP_276068.1| - 0.0016 18.2 0.0 0.0024 17.6 0.0 1.3 1 0 0 1 1 1 1 LexA DNA binding domain TM1586_NiRdase PF14512.6 gi|15678953|ref|NP_276070.1| - 1.4e-38 132.7 0.0 1.6e-38 132.5 0.0 1.0 1 0 0 1 1 1 1 Putative TM nitroreductase Nitroreductase PF00881.24 gi|15678953|ref|NP_276070.1| - 3.3e-07 30.5 0.2 0.0065 16.5 0.0 2.8 2 1 0 2 2 2 2 Nitroreductase family CMD PF02627.20 gi|15678955|ref|NP_276072.1| - 1.6e-18 66.5 3.6 1.8e-18 66.3 3.6 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Fe_dep_repress PF01325.19 gi|15678956|ref|NP_276073.1| - 2.7e-26 91.5 0.3 4.4e-26 90.9 0.3 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|15678956|ref|NP_276073.1| - 2e-22 79.1 0.2 3.7e-22 78.2 0.2 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR PF01047.22 gi|15678956|ref|NP_276073.1| - 6e-08 32.5 0.0 1.4e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15678956|ref|NP_276073.1| - 1.8e-05 24.5 0.0 3.5e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15678956|ref|NP_276073.1| - 0.00082 19.8 0.1 0.0015 18.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|15678956|ref|NP_276073.1| - 0.0013 18.7 0.1 0.007 16.3 0.0 2.2 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|15678956|ref|NP_276073.1| - 0.0017 18.2 0.0 0.0033 17.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|15678956|ref|NP_276073.1| - 0.0019 18.0 0.2 0.0043 16.9 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|15678956|ref|NP_276073.1| - 0.002 18.4 0.1 0.003 17.9 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 gi|15678956|ref|NP_276073.1| - 0.0058 16.5 0.0 0.0094 15.8 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_24 PF13412.6 gi|15678956|ref|NP_276073.1| - 0.01 15.4 0.1 0.035 13.7 0.0 2.0 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding FeoC PF09012.10 gi|15678956|ref|NP_276073.1| - 0.011 15.8 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator Rio2_N PF09202.11 gi|15678956|ref|NP_276073.1| - 0.023 14.9 0.1 0.042 14.1 0.1 1.5 1 0 0 1 1 1 0 Rio2, N-terminal HrcA_DNA-bdg PF03444.15 gi|15678956|ref|NP_276073.1| - 0.026 14.2 0.0 0.09 12.4 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DUF498 PF04430.14 gi|15678958|ref|NP_276075.1| - 1.6e-11 44.2 0.0 1.3e-10 41.2 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) GlnE PF03710.15 gi|15678958|ref|NP_276075.1| - 0.0074 15.7 0.0 0.0093 15.4 0.0 1.1 1 0 0 1 1 1 1 Glutamate-ammonia ligase adenylyltransferase DUF45 PF01863.17 gi|15678959|ref|NP_276076.1| - 5.1e-39 134.5 0.0 3.2e-36 125.3 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF45 WLM PF08325.10 gi|15678959|ref|NP_276076.1| - 0.028 14.5 0.1 0.044 13.9 0.1 1.2 1 0 0 1 1 1 0 WLM domain Zincin_2 PF10103.9 gi|15678959|ref|NP_276076.1| - 0.084 12.1 0.0 9.4 5.4 0.1 2.1 2 0 0 2 2 2 0 Zincin-like metallopeptidase SWI2_SNF2 PF18766.1 gi|15678960|ref|NP_276077.1| - 2.1e-63 214.0 0.1 4.7e-63 212.9 0.1 1.6 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|15678960|ref|NP_276077.1| - 7.9e-37 127.1 0.2 5.7e-36 124.3 0.0 2.3 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|15678960|ref|NP_276077.1| - 3.6e-22 79.2 0.7 1.5e-21 77.2 0.1 2.3 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DUF3387 PF11867.8 gi|15678960|ref|NP_276077.1| - 2.8e-13 50.0 4.4 8.1e-13 48.5 4.4 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF3387) DEAD PF00270.29 gi|15678960|ref|NP_276077.1| - 2.1e-05 24.4 0.0 6.9e-05 22.7 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|15678960|ref|NP_276077.1| - 0.013 15.8 0.1 0.17 12.1 0.0 2.9 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 gi|15678960|ref|NP_276077.1| - 0.077 12.2 0.1 0.22 10.7 0.1 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MnmE_helical PF12631.7 gi|15678960|ref|NP_276077.1| - 1.5 9.0 3.5 19 5.4 0.9 3.0 2 2 0 2 2 2 0 MnmE helical domain Methylase_S PF01420.19 gi|15678961|ref|NP_276078.1| - 6.8e-87 290.0 0.3 2.7e-44 151.4 0.0 2.0 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|15678962|ref|NP_276079.1| - 2.3e-117 391.7 0.0 3.3e-117 391.2 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|15678962|ref|NP_276079.1| - 5.4e-14 53.0 9.0 1.7e-12 48.1 4.4 2.8 3 0 0 3 3 3 2 HsdM N-terminal domain Eco57I PF07669.11 gi|15678962|ref|NP_276079.1| - 0.00077 19.9 0.0 0.0072 16.8 0.0 2.6 2 1 0 2 2 2 1 Eco57I restriction-modification methylase MarR_2 PF12802.7 gi|15678962|ref|NP_276079.1| - 0.0046 16.8 0.0 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15678962|ref|NP_276079.1| - 0.009 16.5 0.1 0.027 14.9 0.1 1.8 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|15678962|ref|NP_276079.1| - 0.012 15.5 0.1 0.031 14.2 0.1 1.6 1 0 0 1 1 1 0 MarR family PEPcase_2 PF14010.6 gi|15678963|ref|NP_276080.1| - 6.2e-196 651.7 0.0 7e-196 651.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Heliorhodopsin PF18761.1 gi|15678964|ref|NP_276081.1| - 2.8e-98 328.1 17.6 3.1e-98 327.9 17.6 1.0 1 0 0 1 1 1 1 Heliorhodopsin ATP-grasp_3 PF02655.14 gi|15678965|ref|NP_276082.1| - 1.6e-41 142.1 0.0 6e-41 140.2 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|15678965|ref|NP_276082.1| - 8e-08 32.1 0.0 2.9e-07 30.3 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|15678965|ref|NP_276082.1| - 3e-05 23.6 0.1 0.00014 21.4 0.0 2.1 2 1 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|15678965|ref|NP_276082.1| - 0.0081 15.4 0.0 1.3 8.2 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp RimK PF08443.11 gi|15678965|ref|NP_276082.1| - 0.043 13.4 0.0 0.21 11.1 0.0 2.0 2 0 0 2 2 2 0 RimK-like ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|15678965|ref|NP_276082.1| - 0.061 12.6 0.0 0.27 10.4 0.0 1.9 2 0 0 2 2 2 0 YheC/D like ATP-grasp GSH-S_ATP PF02955.16 gi|15678965|ref|NP_276082.1| - 0.19 11.1 0.0 0.41 10.0 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain Ribosomal_L22e PF01776.17 gi|15678966|ref|NP_276083.1| - 0.11 12.9 0.1 0.13 12.7 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L22e protein family DUF61 PF01886.16 gi|15678967|ref|NP_276084.1| - 7e-43 145.7 0.2 7.9e-43 145.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 PL48 PF15903.5 gi|15678969|ref|NP_276086.1| - 8e-06 25.1 3.9 8.5e-06 25.0 3.9 1.0 1 0 0 1 1 1 1 Filopodia upregulated, FAM65 AIP3 PF03915.13 gi|15678969|ref|NP_276086.1| - 0.00031 20.0 1.1 0.00038 19.7 1.1 1.1 1 0 0 1 1 1 1 Actin interacting protein 3 DUF724 PF05266.14 gi|15678969|ref|NP_276086.1| - 0.0089 15.9 0.7 0.011 15.6 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF724) ATP-synt_D PF01813.17 gi|15678969|ref|NP_276086.1| - 0.026 14.3 7.4 0.15 11.8 1.7 2.1 1 1 1 2 2 2 0 ATP synthase subunit D CENP-O PF09496.10 gi|15678969|ref|NP_276086.1| - 0.033 14.2 0.7 0.04 13.9 0.7 1.2 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component Syntaxin-6_N PF09177.11 gi|15678969|ref|NP_276086.1| - 0.045 14.3 2.7 0.21 12.2 0.3 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF3461 PF11944.8 gi|15678969|ref|NP_276086.1| - 0.047 13.8 2.0 0.46 10.6 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3461) FapA PF03961.13 gi|15678969|ref|NP_276086.1| - 0.074 11.6 1.5 0.11 11.1 1.5 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A RPA_interact_N PF14766.6 gi|15678969|ref|NP_276086.1| - 0.096 12.3 2.3 4.3 7.1 0.1 2.7 2 0 0 2 2 2 0 Replication protein A interacting N-terminal Prominin PF05478.11 gi|15678969|ref|NP_276086.1| - 0.097 10.6 1.3 4.5 5.1 0.1 1.9 1 1 1 2 2 2 0 Prominin TPR_MLP1_2 PF07926.12 gi|15678969|ref|NP_276086.1| - 0.13 12.3 4.6 1.5 8.9 4.6 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Mod_r PF07200.13 gi|15678969|ref|NP_276086.1| - 0.17 12.0 3.8 0.34 11.0 0.9 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein YabA PF06156.13 gi|15678969|ref|NP_276086.1| - 0.18 12.5 3.7 1.8 9.3 0.1 2.1 2 0 0 2 2 2 0 Initiation control protein YabA DivIC PF04977.15 gi|15678969|ref|NP_276086.1| - 0.27 11.0 6.9 1.6 8.5 0.6 2.6 2 1 0 2 2 2 0 Septum formation initiator DASH_Dam1 PF08653.10 gi|15678969|ref|NP_276086.1| - 0.31 10.9 2.1 9.8 6.1 0.1 3.3 3 1 0 3 3 3 0 DASH complex subunit Dam1 DUF883 PF05957.13 gi|15678969|ref|NP_276086.1| - 0.47 11.1 4.6 0.79 10.4 1.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) TMF_TATA_bd PF12325.8 gi|15678969|ref|NP_276086.1| - 1 9.6 12.9 19 5.5 12.9 2.7 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding COG2 PF06148.11 gi|15678969|ref|NP_276086.1| - 1 9.5 5.3 20 5.3 4.9 2.2 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 KAR9 PF08580.10 gi|15678969|ref|NP_276086.1| - 1.1 7.7 4.0 3.3 6.2 0.8 2.0 2 0 0 2 2 2 0 Yeast cortical protein KAR9 UPF0449 PF15136.6 gi|15678969|ref|NP_276086.1| - 1.3 9.5 5.3 27 5.3 0.1 2.7 2 1 1 3 3 3 0 Uncharacterised protein family UPF0449 CorA PF01544.18 gi|15678969|ref|NP_276086.1| - 1.3 8.2 9.5 0.58 9.4 2.8 1.9 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein RasGAP_C PF03836.15 gi|15678969|ref|NP_276086.1| - 1.9 8.7 5.9 3.1 7.9 0.3 2.2 2 0 0 2 2 2 0 RasGAP C-terminus APG6_N PF17675.1 gi|15678969|ref|NP_276086.1| - 2.4 8.7 8.0 15 6.2 7.2 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF22 PF01629.16 gi|15678970|ref|NP_276087.1| - 3.2e-17 62.1 0.0 3.7e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF22 ATP-synt_D PF01813.17 gi|15678971|ref|NP_276088.1| - 1e-62 211.5 13.4 1.2e-62 211.3 13.4 1.0 1 0 0 1 1 1 1 ATP synthase subunit D CDT1_C PF16679.5 gi|15678971|ref|NP_276088.1| - 0.015 15.7 1.1 0.098 13.1 0.1 2.6 1 1 1 2 2 2 0 DNA replication factor Cdt1 C-terminal domain ZapB PF06005.12 gi|15678971|ref|NP_276088.1| - 3 8.3 8.3 12 6.4 1.7 3.1 2 1 0 2 2 2 0 Cell division protein ZapB ATP-synt_ab PF00006.25 gi|15678972|ref|NP_276089.1| - 2.9e-69 233.0 0.0 3.9e-69 232.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|15678972|ref|NP_276089.1| - 8.8e-14 51.8 3.4 2e-13 50.6 3.4 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|15678972|ref|NP_276089.1| - 2.4e-05 24.4 1.8 6.5e-05 23.0 1.8 1.7 1 0 0 1 1 1 1 HAS barrel domain ATP-synt_ab PF00006.25 gi|15678973|ref|NP_276090.1| - 8e-92 306.7 0.0 1.3e-91 306.0 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|15678973|ref|NP_276090.1| - 3.8e-48 162.3 0.2 7.5e-48 161.4 0.2 1.5 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|15678973|ref|NP_276090.1| - 1.1e-16 61.0 2.6 2.5e-16 60.0 2.6 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|15678973|ref|NP_276090.1| - 0.015 15.6 0.0 0.031 14.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Myosin_N PF02736.19 gi|15678973|ref|NP_276090.1| - 0.6 10.0 2.3 8.8 6.3 0.2 2.9 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain ATP-synt_F PF01990.17 gi|15678974|ref|NP_276091.1| - 2.4e-25 88.7 0.4 2.8e-25 88.4 0.4 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.16 gi|15678975|ref|NP_276092.1| - 1.8e-70 238.1 0.0 2e-70 238.0 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit SinI PF08671.10 gi|15678975|ref|NP_276092.1| - 0.017 14.9 0.2 24 4.8 0.0 3.5 3 0 0 3 3 3 0 Anti-repressor SinI MerR-DNA-bind PF09278.11 gi|15678975|ref|NP_276092.1| - 0.12 12.9 0.0 2.1 9.0 0.0 2.8 3 0 0 3 3 3 0 MerR, DNA binding vATP-synt_E PF01991.18 gi|15678976|ref|NP_276093.1| - 3.1e-58 196.5 15.0 3.5e-58 196.3 15.0 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Trimer_CC PF08954.11 gi|15678976|ref|NP_276093.1| - 0.0064 16.0 1.1 0.019 14.5 1.1 1.9 1 0 0 1 1 1 1 Trimerisation motif DivIVA PF05103.13 gi|15678976|ref|NP_276093.1| - 0.018 15.1 5.4 0.018 15.1 5.4 2.9 2 2 1 3 3 3 0 DivIVA protein ATP-synt_B PF00430.18 gi|15678976|ref|NP_276093.1| - 0.047 13.8 27.8 0.034 14.2 12.1 3.0 2 1 1 3 3 3 0 ATP synthase B/B' CF(0) HrpE PF06188.12 gi|15678976|ref|NP_276093.1| - 3.4 7.5 11.9 10 5.9 5.9 2.1 1 1 1 2 2 2 0 HrpE/YscL/FliH and V-type ATPase subunit E ATP-synt_C PF00137.21 gi|15678977|ref|NP_276094.1| - 2.9e-35 120.4 27.4 2.1e-17 63.2 9.9 2.5 2 0 0 2 2 2 2 ATP synthase subunit C YdfA_immunity PF12127.8 gi|15678977|ref|NP_276094.1| - 0.064 12.3 0.9 0.75 8.8 0.1 2.0 2 0 0 2 2 2 0 SigmaW regulon antibacterial DUF131 PF01998.17 gi|15678977|ref|NP_276094.1| - 9.9 5.9 9.1 15 5.4 1.8 2.4 2 0 0 2 2 2 0 Protein of unknown function DUF131 V_ATPase_I PF01496.19 gi|15678978|ref|NP_276095.1| - 9.3e-25 86.7 9.9 1.3e-18 66.4 0.1 3.9 3 1 0 3 3 3 3 V-type ATPase 116kDa subunit family V-ATPase_G_2 PF16999.5 gi|15678979|ref|NP_276096.1| - 2.8e-06 27.7 17.5 0.00063 20.1 13.1 2.2 1 1 1 2 2 2 2 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|15678979|ref|NP_276096.1| - 1.2e-05 25.4 19.6 0.0063 16.6 10.5 2.1 1 1 1 2 2 2 2 ATP synthase B/B' CF(0) HrpE PF06188.12 gi|15678979|ref|NP_276096.1| - 0.001 19.0 4.9 0.0021 18.0 4.9 1.5 1 1 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E DivIVA PF05103.13 gi|15678979|ref|NP_276096.1| - 0.0088 16.1 11.6 0.075 13.1 3.5 2.1 1 1 1 2 2 2 2 DivIVA protein DUF3552 PF12072.8 gi|15678979|ref|NP_276096.1| - 0.019 14.4 18.9 0.26 10.7 7.9 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF3552) DUF883 PF05957.13 gi|15678979|ref|NP_276096.1| - 0.048 14.3 10.9 0.091 13.4 8.2 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) CENP-H PF05837.12 gi|15678979|ref|NP_276096.1| - 0.059 13.8 7.7 0.071 13.5 7.7 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) LUC7 PF03194.15 gi|15678979|ref|NP_276096.1| - 0.096 12.3 7.2 0.11 12.1 7.2 1.0 1 0 0 1 1 1 0 LUC7 N_terminus V-ATPase_G PF03179.15 gi|15678979|ref|NP_276096.1| - 0.15 12.6 16.2 0.33 11.5 16.2 1.6 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit YtxH PF12732.7 gi|15678979|ref|NP_276096.1| - 0.33 11.5 9.8 9.7 6.8 9.7 2.2 1 1 0 1 1 1 0 YtxH-like protein PPP1R35_C PF15503.6 gi|15678979|ref|NP_276096.1| - 1.2 9.0 7.1 0.33 10.7 1.7 2.0 1 1 1 2 2 2 0 Protein phosphatase 1 regulatory subunit 35 C-terminus Endonuc_Holl PF10107.9 gi|15678979|ref|NP_276096.1| - 2 8.2 7.8 2.5 7.9 7.8 1.3 1 1 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase Citrate_synt PF00285.21 gi|15678980|ref|NP_276097.1| - 6.1e-44 150.5 0.0 3.3e-36 125.1 0.0 2.0 1 1 1 2 2 2 2 Citrate synthase, C-terminal domain Fumerase PF05681.14 gi|15678981|ref|NP_276098.1| - 1.1e-61 208.6 0.0 1.2e-61 208.5 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Peptidase_U32 PF01136.19 gi|15678982|ref|NP_276099.1| - 0.0002 20.6 0.0 0.00078 18.7 0.0 1.9 2 1 0 2 2 2 1 Peptidase family U32 MmgE_PrpD PF03972.14 gi|15678983|ref|NP_276100.1| - 2.1e-115 385.8 0.2 2.5e-115 385.5 0.2 1.0 1 0 0 1 1 1 1 MmgE/PrpD family DUF1743 PF08489.11 gi|15678984|ref|NP_276101.1| - 2.9e-40 137.0 0.0 1.1e-39 135.1 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|15678984|ref|NP_276101.1| - 1.8e-05 24.6 0.0 4.3e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|15678984|ref|NP_276101.1| - 0.0017 18.5 0.0 0.0043 17.2 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain HTH_3 PF01381.22 gi|15678985|ref|NP_276102.1| - 2.2e-13 50.0 2.1 4.8e-13 49.0 0.4 2.3 3 0 0 3 3 3 1 Helix-turn-helix HTH_19 PF12844.7 gi|15678985|ref|NP_276102.1| - 2.7e-10 40.1 0.8 1.1e-08 34.9 0.5 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|15678985|ref|NP_276102.1| - 4.4e-08 33.4 0.0 4.2e-07 30.2 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|15678985|ref|NP_276102.1| - 0.0031 17.3 0.4 0.047 13.6 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|15678985|ref|NP_276102.1| - 0.0063 16.4 0.8 0.015 15.2 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_26 PF13443.6 gi|15678985|ref|NP_276102.1| - 0.0095 16.4 0.1 0.02 15.3 0.1 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain TetR_N PF00440.23 gi|15678985|ref|NP_276102.1| - 0.017 14.9 0.0 0.11 12.3 0.0 2.3 3 0 0 3 3 3 0 Bacterial regulatory proteins, tetR family HTH_17 PF12728.7 gi|15678985|ref|NP_276102.1| - 0.02 15.1 0.0 0.25 11.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|15678985|ref|NP_276102.1| - 0.05 13.4 0.0 0.17 11.8 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_24 PF13412.6 gi|15678985|ref|NP_276102.1| - 0.078 12.6 0.1 0.28 10.8 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding LacI PF00356.21 gi|15678985|ref|NP_276102.1| - 0.15 11.8 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family 2-Hacid_dh_C PF02826.19 gi|15678988|ref|NP_276105.1| - 1.1e-71 239.9 0.0 2.2e-71 238.9 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|15678988|ref|NP_276105.1| - 5.3e-43 145.9 2.8 7.5e-42 142.2 0.9 2.9 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|15678988|ref|NP_276105.1| - 5.3e-13 48.5 0.8 2.7e-12 46.2 0.1 2.6 2 0 0 2 2 2 1 ACT domain NAD_binding_2 PF03446.15 gi|15678988|ref|NP_276105.1| - 2.9e-06 27.5 0.9 7.4e-06 26.2 0.1 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|15678988|ref|NP_276105.1| - 9.8e-06 26.1 0.6 0.0071 16.9 0.0 2.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|15678988|ref|NP_276105.1| - 7.4e-05 22.9 0.1 0.00022 21.3 0.1 1.7 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 gi|15678988|ref|NP_276105.1| - 8.1e-05 22.3 0.0 0.0003 20.4 0.0 2.0 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_C PF03720.15 gi|15678988|ref|NP_276105.1| - 0.00021 21.7 0.5 0.0069 16.8 0.0 3.0 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_7 PF13241.6 gi|15678988|ref|NP_276105.1| - 0.004 17.6 0.2 0.024 15.1 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding GFO_IDH_MocA PF01408.22 gi|15678988|ref|NP_276105.1| - 0.06 14.2 0.1 0.77 10.6 0.0 2.4 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Resolvase PF00239.21 gi|15678988|ref|NP_276105.1| - 0.089 12.9 0.1 0.2 11.7 0.1 1.6 1 0 0 1 1 1 0 Resolvase, N terminal domain DUF1269 PF06897.12 gi|15678988|ref|NP_276105.1| - 0.17 12.2 1.0 1.9 8.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Prok-JAB PF14464.6 gi|15678989|ref|NP_276106.1| - 4.4e-13 49.0 0.1 5.4e-13 48.8 0.1 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 gi|15678989|ref|NP_276106.1| - 0.0014 18.6 0.1 0.0094 15.9 0.1 1.9 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Thg1 PF04446.12 gi|15678990|ref|NP_276107.1| - 3.1e-29 101.6 0.0 4e-29 101.2 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 gi|15678990|ref|NP_276107.1| - 0.00049 20.3 0.0 0.00066 19.8 0.0 1.2 1 0 0 1 1 1 1 Thg1 C terminal domain LRR_adjacent PF08191.11 gi|15678990|ref|NP_276107.1| - 0.096 12.9 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 LRR adjacent DUF108 PF01958.18 gi|15678991|ref|NP_276108.1| - 1.3e-31 108.8 0.1 2.5e-31 107.9 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|15678991|ref|NP_276108.1| - 1.4e-26 93.4 0.1 2.6e-26 92.6 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|15678991|ref|NP_276108.1| - 6e-07 30.0 0.1 1.5e-06 28.7 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|15678991|ref|NP_276108.1| - 9.5e-06 26.4 0.0 2.1e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 gi|15678991|ref|NP_276108.1| - 0.00085 19.4 0.3 0.012 15.8 0.1 2.3 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|15678991|ref|NP_276108.1| - 0.0076 16.7 0.1 0.012 16.1 0.1 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain PRC PF05239.16 gi|15678992|ref|NP_276109.1| - 5.3e-13 48.8 2.8 2.4e-12 46.8 2.8 1.9 1 1 0 1 1 1 1 PRC-barrel domain Alpha_Helical PF18489.1 gi|15678993|ref|NP_276110.1| - 3.6e-53 179.1 0.0 4.7e-53 178.7 0.0 1.1 1 0 0 1 1 1 1 Alpha helical domain tRNA_bind PF01588.20 gi|15678993|ref|NP_276110.1| - 3.1e-17 62.5 0.0 5.3e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain DUF3400 PF11880.8 gi|15678993|ref|NP_276110.1| - 0.037 13.5 0.3 0.37 10.3 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3400) Radical_SAM PF04055.21 gi|15678994|ref|NP_276111.1| - 2.6e-23 83.2 0.1 4.6e-23 82.4 0.0 1.4 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15678994|ref|NP_276111.1| - 8.5e-11 42.3 0.0 2.7e-10 40.6 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15678994|ref|NP_276111.1| - 5.1e-08 33.1 0.0 9e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Acetyltransf_6 PF13480.7 gi|15678994|ref|NP_276111.1| - 0.0043 17.2 0.1 0.016 15.4 0.1 2.0 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Fn3_assoc PF13287.6 gi|15678995|ref|NP_276112.1| - 2.6e-16 59.5 3.5 2.6e-16 59.5 3.5 2.5 2 0 0 2 2 2 1 Fn3 associated CHB_HEX_C_1 PF13290.6 gi|15678995|ref|NP_276112.1| - 3.3e-16 59.0 5.8 3.3e-16 59.0 5.8 3.1 3 0 0 3 3 3 1 Chitobiase/beta-hexosaminidase C-terminal domain CARDB PF07705.11 gi|15678995|ref|NP_276112.1| - 6.1e-05 23.2 1.6 6.1e-05 23.2 1.6 2.9 2 1 1 3 3 3 1 CARDB CBM60 PF16841.5 gi|15678995|ref|NP_276112.1| - 0.26 11.7 2.7 0.27 11.7 0.4 2.1 2 0 0 2 2 2 0 Ca-dependent carbohydrate-binding module xylan-binding Aldedh PF00171.22 gi|15678996|ref|NP_276113.1| - 3.6e-150 500.5 0.0 4.8e-150 500.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|15678996|ref|NP_276113.1| - 0.00024 20.3 0.0 0.00036 19.7 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Class_IIIsignal PF04021.12 gi|15678997|ref|NP_276114.1| - 1.6e-06 27.9 2.7 2.1e-06 27.5 2.7 1.2 1 0 0 1 1 1 1 Class III signal peptide Oleosin PF01277.17 gi|15678997|ref|NP_276114.1| - 0.011 15.5 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 Oleosin T2SSF PF00482.23 gi|15678998|ref|NP_276115.1| - 7.6e-23 80.8 4.4 7.6e-23 80.8 4.4 3.4 4 1 1 5 5 5 1 Type II secretion system (T2SS), protein F Pam17 PF08566.10 gi|15678998|ref|NP_276115.1| - 0.043 13.7 2.0 2.3 8.1 0.7 2.3 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 DUF677 PF05055.12 gi|15678998|ref|NP_276115.1| - 0.075 11.9 0.2 0.075 11.9 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF677) Peptidase_M24 PF00557.24 gi|15678999|ref|NP_276116.1| - 2.1e-54 184.4 0.4 2.8e-54 184.0 0.4 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|15678999|ref|NP_276116.1| - 1.6e-05 25.5 0.0 2.7e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Peptidase_M66 PF10462.9 gi|15678999|ref|NP_276116.1| - 0.096 11.6 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase M66 GalP_UDP_tr_C PF02744.17 gi|15679000|ref|NP_276117.1| - 0.049 13.4 0.0 0.068 12.9 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF3483 PF11982.8 gi|15679000|ref|NP_276117.1| - 0.43 10.2 1.6 0.64 9.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3483) Fe-ADH PF00465.19 gi|15679002|ref|NP_276119.1| - 1.2e-117 392.8 0.5 1.3e-117 392.7 0.5 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|15679002|ref|NP_276119.1| - 5.2e-15 55.8 3.6 1e-06 28.7 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase TOM20_plant PF06552.12 gi|15679002|ref|NP_276119.1| - 0.18 11.5 0.0 0.73 9.6 0.0 1.8 1 1 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 HisKA_2 PF07568.12 gi|15679003|ref|NP_276120.1| - 8.3e-31 105.9 1.4 1.8e-30 104.9 1.4 1.6 1 0 0 1 1 1 1 Histidine kinase PAS PF00989.25 gi|15679003|ref|NP_276120.1| - 4.2e-13 49.3 0.0 9.8e-13 48.1 0.0 1.6 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|15679003|ref|NP_276120.1| - 6e-10 38.9 0.0 1.5e-09 37.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|15679003|ref|NP_276120.1| - 4.5e-09 36.5 0.0 1.2e-08 35.1 0.0 1.8 1 0 0 1 1 1 1 PAS domain HATPase_c PF02518.26 gi|15679003|ref|NP_276120.1| - 5.6e-09 36.5 0.0 1.6e-08 35.1 0.0 1.8 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|15679003|ref|NP_276120.1| - 9.5e-08 32.0 0.0 1.7e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|15679003|ref|NP_276120.1| - 6.9e-06 26.7 0.1 2.3e-05 25.0 0.1 1.9 2 0 0 2 2 2 1 HWE histidine kinase PAS_4 PF08448.10 gi|15679003|ref|NP_276120.1| - 0.00016 21.9 0.0 0.00027 21.2 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 gi|15679003|ref|NP_276120.1| - 0.0052 17.0 0.0 0.073 13.4 0.0 2.5 2 0 0 2 2 2 1 PAS fold HATPase_c_3 PF13589.6 gi|15679003|ref|NP_276120.1| - 0.052 13.4 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 gi|15679003|ref|NP_276120.1| - 0.13 12.0 0.7 0.26 11.0 0.7 1.5 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Peptidase_M50 PF02163.22 gi|15679004|ref|NP_276121.1| - 1.1e-06 28.1 13.1 0.001 18.4 0.8 3.2 2 1 1 3 3 3 3 Peptidase family M50 UPF0060 PF02694.15 gi|15679004|ref|NP_276121.1| - 0.027 14.7 4.4 0.027 14.7 4.4 2.4 2 1 1 3 3 3 0 Uncharacterised BCR, YnfA/UPF0060 family YcaO PF02624.16 gi|15679005|ref|NP_276122.1| - 2e-93 313.2 1.2 2.5e-93 312.9 1.2 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding TfuA PF07812.12 gi|15679006|ref|NP_276123.1| - 3.7e-11 42.8 0.0 1.9e-10 40.5 0.1 1.9 2 0 0 2 2 2 1 TfuA-like protein TfuA PF07812.12 gi|15679007|ref|NP_276124.1| - 5.1e-18 64.9 0.0 6.8e-18 64.5 0.0 1.2 1 0 0 1 1 1 1 TfuA-like protein QueC PF06508.13 gi|15679008|ref|NP_276125.1| - 2.3e-06 27.3 0.0 1.1e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|15679008|ref|NP_276125.1| - 0.00013 21.7 0.1 0.0013 18.6 0.1 2.2 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|15679008|ref|NP_276125.1| - 0.003 17.6 0.0 0.008 16.2 0.0 1.7 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|15679008|ref|NP_276125.1| - 0.0098 15.6 0.1 0.014 15.1 0.1 1.2 1 0 0 1 1 1 1 Asparagine synthase Arginosuc_synth PF00764.19 gi|15679008|ref|NP_276125.1| - 0.099 11.9 0.1 0.44 9.8 0.1 1.9 1 1 0 1 1 1 0 Arginosuccinate synthase CBS PF00571.28 gi|15679010|ref|NP_276127.1| - 5.1e-46 154.9 8.6 3.5e-15 56.2 1.2 4.1 4 0 0 4 4 4 4 CBS domain Usp PF00582.26 gi|15679011|ref|NP_276128.1| - 7.4e-39 133.5 1.6 8.3e-39 133.3 1.6 1.0 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|15679011|ref|NP_276128.1| - 0.0046 16.9 0.6 1.4 8.8 0.0 2.2 1 1 1 2 2 2 2 Electron transfer flavoprotein domain DNA_photolyase PF00875.18 gi|15679011|ref|NP_276128.1| - 0.052 13.5 0.0 0.078 13.0 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase SIS PF01380.22 gi|15679011|ref|NP_276128.1| - 0.12 12.3 0.1 0.49 10.3 0.1 1.8 1 1 1 2 2 2 0 SIS domain DDE_Tnp_1_4 PF13701.6 gi|15679011|ref|NP_276128.1| - 0.18 10.1 0.0 0.22 9.8 0.0 1.1 1 0 0 1 1 1 0 Transposase DDE domain group 1 Amidohydro_1 PF01979.20 gi|15679012|ref|NP_276129.1| - 2.2e-56 191.6 0.0 2.6e-56 191.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15679012|ref|NP_276129.1| - 1.7e-07 31.1 0.0 0.00025 20.7 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family PKD PF00801.20 gi|15679013|ref|NP_276130.1| - 4e-17 61.8 3.7 1e-16 60.5 3.1 2.1 1 1 0 1 1 1 1 PKD domain CARDB PF07705.11 gi|15679013|ref|NP_276130.1| - 2.2e-09 37.5 0.6 1.4e-08 34.9 0.0 2.6 3 0 0 3 3 3 1 CARDB Laminin_G_2 PF02210.24 gi|15679013|ref|NP_276130.1| - 0.023 15.3 0.1 0.33 11.5 0.0 2.3 1 1 0 1 1 1 0 Laminin G domain UPF0180 PF03698.13 gi|15679013|ref|NP_276130.1| - 0.086 13.0 0.3 0.7 10.1 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) CPSase_L_D2 PF02786.17 gi|15679014|ref|NP_276131.1| - 6.4e-79 264.3 0.1 7.6e-39 133.4 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|15679014|ref|NP_276131.1| - 1.8e-43 147.7 0.0 6e-43 146.1 0.0 1.9 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|15679014|ref|NP_276131.1| - 3.5e-17 62.4 0.0 1.8e-16 60.1 0.0 2.3 1 0 0 1 1 1 1 MGS-like domain ATPgrasp_Ter PF15632.6 gi|15679014|ref|NP_276131.1| - 8.8e-15 54.6 0.0 4.4e-06 26.5 0.0 3.0 3 0 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 gi|15679014|ref|NP_276131.1| - 2.7e-12 46.6 0.0 5.7e-10 39.0 0.0 2.5 2 0 0 2 2 2 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|15679014|ref|NP_276131.1| - 1.2e-10 41.3 0.0 8e-06 25.5 0.0 2.6 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|15679014|ref|NP_276131.1| - 2.5e-06 27.6 0.1 0.017 15.2 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|15679014|ref|NP_276131.1| - 0.0001 22.2 0.0 0.00064 19.5 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|15679014|ref|NP_276131.1| - 0.0034 16.9 0.0 0.0078 15.7 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|15679014|ref|NP_276131.1| - 0.03 13.9 0.0 0.26 10.8 0.0 2.5 3 0 0 3 3 3 0 RimK-like ATP-grasp domain Isochorismatase PF00857.20 gi|15679014|ref|NP_276131.1| - 0.14 12.3 0.3 0.45 10.7 0.1 1.8 2 0 0 2 2 2 0 Isochorismatase family CPSase_L_D2 PF02786.17 gi|15679015|ref|NP_276132.1| - 7.2e-31 107.3 0.0 1.2e-30 106.6 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|15679015|ref|NP_276132.1| - 0.00089 18.8 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 gi|15679015|ref|NP_276132.1| - 0.0096 15.7 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|15679015|ref|NP_276132.1| - 0.019 14.5 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain Epimerase PF01370.21 gi|15679015|ref|NP_276132.1| - 0.021 14.3 0.0 0.033 13.6 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family ATP-grasp_5 PF13549.6 gi|15679015|ref|NP_276132.1| - 0.021 14.3 0.0 0.042 13.3 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|15679015|ref|NP_276132.1| - 0.031 13.8 0.0 0.065 12.8 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain Mur_ligase PF01225.25 gi|15679015|ref|NP_276132.1| - 0.082 13.2 0.1 2.8 8.3 0.0 2.7 2 1 0 2 2 2 0 Mur ligase family, catalytic domain Pyr_redox PF00070.27 gi|15679015|ref|NP_276132.1| - 0.19 12.3 0.8 18 6.0 0.0 3.1 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase CPSase_sm_chain PF00988.22 gi|15679016|ref|NP_276133.1| - 2.3e-50 169.7 0.0 3.6e-50 169.1 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|15679016|ref|NP_276133.1| - 3.4e-44 150.9 0.0 4.5e-44 150.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15679016|ref|NP_276133.1| - 9e-09 35.4 0.1 5.7e-06 26.2 0.1 2.3 1 1 0 1 1 1 1 Peptidase C26 Acetyltransf_1 PF00583.25 gi|15679017|ref|NP_276134.1| - 8.3e-22 77.6 0.1 1e-21 77.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15679017|ref|NP_276134.1| - 3.7e-19 68.9 0.0 4.1e-19 68.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15679017|ref|NP_276134.1| - 1.4e-15 57.4 0.4 2e-15 57.0 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15679017|ref|NP_276134.1| - 3.3e-08 33.4 0.0 4.7e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|15679017|ref|NP_276134.1| - 8.2e-08 32.5 0.6 1.4e-07 31.8 0.6 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15679017|ref|NP_276134.1| - 1.4e-05 25.8 0.1 2.2e-05 25.1 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|15679017|ref|NP_276134.1| - 0.00075 19.7 0.0 0.0012 19.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15679017|ref|NP_276134.1| - 0.00093 18.9 0.0 0.0025 17.5 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15679017|ref|NP_276134.1| - 0.0014 18.7 0.0 0.018 15.1 0.0 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|15679017|ref|NP_276134.1| - 0.004 17.2 0.0 0.0069 16.5 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|15679017|ref|NP_276134.1| - 0.0083 15.7 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase PanZ PF12568.8 gi|15679017|ref|NP_276134.1| - 0.022 14.5 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ UPF0146 PF03686.13 gi|15679018|ref|NP_276135.1| - 8.6e-55 184.1 0.1 9.8e-55 183.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) E1-E2_ATPase PF00122.20 gi|15679019|ref|NP_276136.1| - 7.5e-53 178.7 1.0 7.5e-53 178.7 1.0 3.2 3 1 1 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|15679019|ref|NP_276136.1| - 1.4e-42 145.4 6.9 1.4e-42 145.4 6.9 1.9 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|15679019|ref|NP_276136.1| - 1.2e-25 91.0 1.7 4e-25 89.3 1.7 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|15679019|ref|NP_276136.1| - 2.3e-21 75.3 0.1 7.6e-21 73.6 0.1 2.0 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|15679019|ref|NP_276136.1| - 1.1e-20 73.5 0.0 3.1e-20 72.0 0.0 1.8 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|15679019|ref|NP_276136.1| - 2.2e-08 34.2 0.2 2.8e-05 24.0 0.4 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15679019|ref|NP_276136.1| - 1.6e-06 28.6 0.2 4.4e-06 27.2 0.2 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase 7tm_6 PF02949.20 gi|15679019|ref|NP_276136.1| - 8.7 5.3 6.8 19 4.2 2.9 2.6 2 0 0 2 2 2 0 7tm Odorant receptor CbiJ PF02571.14 gi|15679020|ref|NP_276137.1| - 1.2e-68 231.1 0.0 1.5e-68 230.9 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK ADH_zinc_N PF00107.26 gi|15679020|ref|NP_276137.1| - 0.025 14.6 0.1 0.11 12.4 0.0 2.1 2 0 0 2 2 2 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 gi|15679020|ref|NP_276137.1| - 0.056 13.3 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 gi|15679020|ref|NP_276137.1| - 0.066 13.5 0.0 0.34 11.2 0.0 2.0 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain ATPgrasp_N PF18130.1 gi|15679020|ref|NP_276137.1| - 0.092 13.3 0.2 1.3 9.7 0.0 2.4 2 0 0 2 2 2 0 ATP-grasp N-terminal domain MoeA_N PF03453.17 gi|15679021|ref|NP_276138.1| - 3.2e-44 150.5 0.4 5.2e-44 149.8 0.4 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|15679021|ref|NP_276138.1| - 9.4e-29 99.9 0.1 1.5e-28 99.3 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|15679021|ref|NP_276138.1| - 1.6e-17 63.4 0.0 5.5e-17 61.7 0.0 2.0 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) eIF-1a PF01176.19 gi|15679022|ref|NP_276139.1| - 5.1e-23 80.7 0.8 7.2e-23 80.2 0.8 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RIO1 PF01163.22 gi|15679023|ref|NP_276140.1| - 1.9e-66 223.3 0.0 2.6e-66 222.8 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|15679023|ref|NP_276140.1| - 0.0013 18.1 0.1 0.074 12.4 0.1 2.3 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|15679023|ref|NP_276140.1| - 0.0026 17.7 0.5 0.057 13.3 0.1 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family KH_1 PF00013.29 gi|15679024|ref|NP_276141.1| - 1.2e-10 41.0 5.1 2.2e-05 24.2 0.1 2.4 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|15679024|ref|NP_276141.1| - 0.00055 19.7 8.4 0.037 13.8 1.3 2.9 2 2 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|15679024|ref|NP_276141.1| - 0.019 14.8 2.3 3.7 7.5 0.0 3.0 2 1 0 2 2 2 0 KH domain KH_8 PF17903.1 gi|15679024|ref|NP_276141.1| - 0.086 12.9 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Krr1 KH1 domain Topo-VIb_trans PF09239.11 gi|15679025|ref|NP_276142.1| - 2.9e-58 196.2 0.0 4.3e-58 195.6 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|15679025|ref|NP_276142.1| - 2.2e-11 44.3 0.1 4.4e-11 43.3 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|15679025|ref|NP_276142.1| - 2.1e-06 27.6 0.0 3.8e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TP6A_N PF04406.14 gi|15679026|ref|NP_276143.1| - 1.3e-14 53.9 0.0 2.2e-14 53.2 0.0 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase IMS_HHH PF11798.8 gi|15679026|ref|NP_276143.1| - 0.053 13.9 0.0 0.16 12.4 0.0 1.8 1 0 0 1 1 1 0 IMS family HHH motif Gp_dh_C PF02800.20 gi|15679027|ref|NP_276144.1| - 9.9e-34 116.2 0.1 1.5e-33 115.6 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|15679027|ref|NP_276144.1| - 9.8e-12 45.1 0.2 2.3e-11 43.9 0.2 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|15679027|ref|NP_276144.1| - 7.7e-06 26.2 0.2 4e-05 23.9 0.0 2.3 2 1 1 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|15679027|ref|NP_276144.1| - 0.0019 17.6 0.2 0.033 13.6 0.1 2.3 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|15679027|ref|NP_276144.1| - 0.0042 17.3 0.1 0.039 14.2 0.1 2.2 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 gi|15679027|ref|NP_276144.1| - 0.0073 17.1 0.2 0.033 15.0 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 gi|15679027|ref|NP_276144.1| - 0.0081 16.8 0.1 0.036 14.7 0.0 2.1 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|15679027|ref|NP_276144.1| - 0.024 15.1 0.0 0.047 14.1 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|15679027|ref|NP_276144.1| - 0.061 13.2 1.3 0.095 12.6 0.2 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Phos_pyr_kin PF08543.12 gi|15679027|ref|NP_276144.1| - 0.1 12.0 0.1 2 7.7 0.0 2.3 2 0 0 2 2 2 0 Phosphomethylpyrimidine kinase F420_oxidored PF03807.17 gi|15679027|ref|NP_276144.1| - 0.13 12.8 0.4 1 10.0 0.1 2.4 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|15679027|ref|NP_276144.1| - 0.15 12.3 2.7 0.28 11.5 0.1 2.8 3 1 0 3 3 3 0 TrkA-N domain DUF348 PF03990.14 gi|15679027|ref|NP_276144.1| - 0.17 11.7 1.2 0.27 11.0 0.3 1.8 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain CoA_binding PF02629.19 gi|15679027|ref|NP_276144.1| - 0.5 11.1 2.4 1 10.1 0.4 2.3 2 0 0 2 2 2 0 CoA binding domain AP_endonuc_2 PF01261.24 gi|15679028|ref|NP_276145.1| - 1e-17 64.3 0.1 1.6e-17 63.6 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|15679028|ref|NP_276145.1| - 0.085 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 UV-endonuclease UvdE AAA PF00004.29 gi|15679029|ref|NP_276146.1| - 1.9e-37 128.6 0.0 5e-37 127.3 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|15679029|ref|NP_276146.1| - 1.4e-08 34.6 0.0 7.2e-08 32.3 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|15679029|ref|NP_276146.1| - 8.7e-08 32.5 0.0 1.9e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|15679029|ref|NP_276146.1| - 3.8e-06 27.2 0.3 0.0052 17.1 0.0 3.0 2 1 1 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|15679029|ref|NP_276146.1| - 6e-06 26.7 0.0 0.0019 18.6 0.0 2.6 1 1 1 2 2 2 1 AAA ATPase domain AAA_lid_3 PF17862.1 gi|15679029|ref|NP_276146.1| - 1.2e-05 25.0 0.5 3.4e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 AAA+ lid domain TIP49 PF06068.13 gi|15679029|ref|NP_276146.1| - 2.5e-05 23.7 0.0 5.8e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_33 PF13671.6 gi|15679029|ref|NP_276146.1| - 3.4e-05 24.0 0.0 9.6e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|15679029|ref|NP_276146.1| - 0.0002 21.4 0.3 0.0042 17.1 0.1 3.1 3 1 0 3 3 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|15679029|ref|NP_276146.1| - 0.00084 18.8 0.0 0.0026 17.1 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|15679029|ref|NP_276146.1| - 0.0026 17.7 0.0 0.0057 16.6 0.0 1.6 1 0 0 1 1 1 1 NACHT domain DUF1409 PF07197.12 gi|15679029|ref|NP_276146.1| - 0.0054 16.6 0.1 0.026 14.4 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1409) Bac_DnaA PF00308.18 gi|15679029|ref|NP_276146.1| - 0.0075 16.1 0.7 0.063 13.1 0.7 2.0 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_7 PF12775.7 gi|15679029|ref|NP_276146.1| - 0.0083 15.7 0.0 0.022 14.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|15679029|ref|NP_276146.1| - 0.0094 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|15679029|ref|NP_276146.1| - 0.0096 16.3 0.0 0.023 15.1 0.0 1.7 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 gi|15679029|ref|NP_276146.1| - 0.011 15.9 0.1 0.029 14.6 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_18 PF13238.6 gi|15679029|ref|NP_276146.1| - 0.015 15.8 0.0 0.035 14.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|15679029|ref|NP_276146.1| - 0.017 14.3 0.0 0.038 13.2 0.0 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF815) AAA_3 PF07726.11 gi|15679029|ref|NP_276146.1| - 0.018 14.9 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 gi|15679029|ref|NP_276146.1| - 0.033 13.4 0.1 0.084 12.1 0.0 1.6 1 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Torsin PF06309.11 gi|15679029|ref|NP_276146.1| - 0.037 14.1 0.0 0.11 12.6 0.0 1.7 2 0 0 2 2 1 0 Torsin TsaE PF02367.17 gi|15679029|ref|NP_276146.1| - 0.039 14.0 0.0 0.074 13.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SKI PF01202.22 gi|15679029|ref|NP_276146.1| - 0.05 13.7 0.1 3.6 7.7 0.0 2.6 2 1 0 2 2 2 0 Shikimate kinase Parvo_NS1 PF01057.17 gi|15679029|ref|NP_276146.1| - 0.064 12.3 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_14 PF13173.6 gi|15679029|ref|NP_276146.1| - 0.068 13.2 0.0 0.17 11.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|15679029|ref|NP_276146.1| - 0.088 12.1 0.1 0.37 10.0 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin GCD14_N PF14801.6 gi|15679029|ref|NP_276146.1| - 0.12 12.3 0.0 0.34 10.8 0.0 1.8 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit N-term AAA_24 PF13479.6 gi|15679029|ref|NP_276146.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|15679029|ref|NP_276146.1| - 0.15 11.6 0.1 0.57 9.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|15679029|ref|NP_276146.1| - 0.2 11.3 0.1 0.75 9.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain Shikimate_DH PF01488.20 gi|15679030|ref|NP_276147.1| - 7.2e-43 146.0 0.1 1.6e-42 144.9 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|15679030|ref|NP_276147.1| - 6.8e-30 103.8 0.1 2.3e-29 102.0 0.1 2.0 1 1 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|15679030|ref|NP_276147.1| - 3.5e-19 69.1 0.4 3.5e-19 69.1 0.4 2.0 2 0 0 2 2 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|15679030|ref|NP_276147.1| - 5.8e-07 30.0 0.5 1.9e-06 28.4 0.0 2.2 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent Glu_dehyd_C PF16912.5 gi|15679030|ref|NP_276147.1| - 0.00017 21.2 0.0 0.00033 20.2 0.0 1.4 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Sacchrp_dh_NADP PF03435.18 gi|15679030|ref|NP_276147.1| - 0.00023 21.4 0.2 0.0011 19.3 0.1 2.2 2 1 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|15679030|ref|NP_276147.1| - 0.0039 17.3 0.0 0.0091 16.1 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.15 gi|15679030|ref|NP_276147.1| - 0.0049 17.1 0.0 0.011 15.9 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 gi|15679030|ref|NP_276147.1| - 0.0062 16.5 0.9 0.015 15.2 0.2 2.0 2 1 1 3 3 3 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|15679030|ref|NP_276147.1| - 0.0081 15.5 0.1 0.016 14.6 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|15679030|ref|NP_276147.1| - 0.0099 15.2 0.2 0.14 11.5 0.1 2.6 2 1 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_7 PF13241.6 gi|15679030|ref|NP_276147.1| - 0.014 15.8 0.0 0.03 14.8 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Asp4 PF16996.5 gi|15679030|ref|NP_276147.1| - 0.019 14.7 0.1 0.069 13.0 0.1 1.9 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 TrkA_N PF02254.18 gi|15679030|ref|NP_276147.1| - 0.051 13.8 0.1 0.12 12.7 0.1 1.7 1 0 0 1 1 1 0 TrkA-N domain ApbA PF02558.16 gi|15679030|ref|NP_276147.1| - 0.052 13.2 0.2 0.43 10.2 0.1 2.2 1 1 1 2 2 2 0 Ketopantoate reductase PanE/ApbA GFO_IDH_MocA PF01408.22 gi|15679030|ref|NP_276147.1| - 0.085 13.7 0.0 0.19 12.5 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_7 PF13241.6 gi|15679031|ref|NP_276148.1| - 6.9e-26 90.7 0.0 1.5e-25 89.6 0.0 1.5 2 0 0 2 2 2 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|15679031|ref|NP_276148.1| - 1.3e-05 24.6 0.0 2e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|15679031|ref|NP_276148.1| - 0.0036 17.5 0.1 0.5 10.7 0.1 2.4 1 1 1 2 2 2 1 TrkA-N domain 3HCDH_N PF02737.18 gi|15679031|ref|NP_276148.1| - 0.0074 16.2 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|15679031|ref|NP_276148.1| - 0.035 14.7 0.4 0.16 12.6 0.1 2.3 2 2 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|15679031|ref|NP_276148.1| - 0.039 13.5 0.0 0.18 11.4 0.0 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain ELFV_dehydrog PF00208.21 gi|15679031|ref|NP_276148.1| - 0.042 13.6 0.0 0.06 13.0 0.0 1.3 1 1 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.16 gi|15679031|ref|NP_276148.1| - 0.061 13.0 0.0 0.14 11.8 0.0 1.5 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Rossmann-like PF10727.9 gi|15679031|ref|NP_276148.1| - 0.085 12.7 0.2 0.43 10.4 0.2 2.0 1 1 0 1 1 1 0 Rossmann-like domain Pyr_redox_2 PF07992.14 gi|15679031|ref|NP_276148.1| - 0.092 12.0 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sirohm_synth_M PF14824.6 gi|15679031|ref|NP_276148.1| - 0.099 12.1 0.0 0.24 10.9 0.0 1.7 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central Shikimate_DH PF01488.20 gi|15679031|ref|NP_276148.1| - 0.14 12.2 0.0 0.37 10.8 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase GIT_CC PF16559.5 gi|15679032|ref|NP_276149.1| - 0.0085 15.9 0.2 1.8 8.5 0.2 2.2 2 0 0 2 2 2 2 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3606 PF12244.8 gi|15679032|ref|NP_276149.1| - 0.0085 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3606) HTH_3 PF01381.22 gi|15679032|ref|NP_276149.1| - 0.048 13.7 0.0 0.16 12.1 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix Maf_N PF08383.11 gi|15679032|ref|NP_276149.1| - 0.2 11.5 0.8 1.2 9.0 0.5 2.1 2 0 0 2 2 2 0 Maf N-terminal region ABC_tran PF00005.27 gi|15679033|ref|NP_276150.1| - 2.9e-51 173.6 0.0 4.5e-25 88.7 0.0 2.3 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 gi|15679033|ref|NP_276150.1| - 7.1e-07 29.3 0.1 0.0017 18.3 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase SMC_N PF02463.19 gi|15679033|ref|NP_276150.1| - 7.2e-07 28.9 0.5 0.12 11.8 0.1 3.5 2 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|15679033|ref|NP_276150.1| - 3.4e-06 27.1 0.8 5.6 6.7 0.0 4.1 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15679033|ref|NP_276150.1| - 0.00029 21.1 0.4 0.24 11.7 0.0 3.0 3 0 0 3 3 3 1 AAA domain MMR_HSR1 PF01926.23 gi|15679033|ref|NP_276150.1| - 0.00037 20.6 2.2 0.25 11.4 0.1 3.1 3 0 0 3 3 3 2 50S ribosome-binding GTPase AAA_29 PF13555.6 gi|15679033|ref|NP_276150.1| - 0.00079 19.1 0.7 0.26 11.0 0.1 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|15679033|ref|NP_276150.1| - 0.0057 16.4 0.1 3.9 7.1 0.1 2.5 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 gi|15679033|ref|NP_276150.1| - 0.0061 16.8 0.0 2.3 8.5 0.0 3.3 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.6 gi|15679033|ref|NP_276150.1| - 0.0098 16.3 1.9 1.4 9.2 0.1 2.8 2 2 0 2 2 2 1 AAA ATPase domain MeaB PF03308.16 gi|15679033|ref|NP_276150.1| - 0.011 14.8 0.6 0.15 11.0 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP-synt_ab PF00006.25 gi|15679033|ref|NP_276150.1| - 0.019 14.6 0.0 3 7.4 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain MobB PF03205.14 gi|15679033|ref|NP_276150.1| - 0.021 14.7 0.6 1.6 8.6 0.1 2.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 gi|15679033|ref|NP_276150.1| - 0.027 15.0 1.2 5.6 7.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|15679033|ref|NP_276150.1| - 0.032 13.8 1.4 5.5 6.5 0.0 3.5 4 1 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 gi|15679033|ref|NP_276150.1| - 0.033 13.4 2.5 3.9 6.6 0.1 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_33 PF13671.6 gi|15679033|ref|NP_276150.1| - 0.036 14.2 0.4 0.48 10.6 0.1 2.5 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|15679033|ref|NP_276150.1| - 0.038 14.1 0.5 5 7.2 0.0 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|15679033|ref|NP_276150.1| - 0.046 13.0 0.0 7.1 5.9 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_18 PF13238.6 gi|15679033|ref|NP_276150.1| - 0.056 14.0 0.5 4.7 7.8 0.2 3.0 3 1 0 3 3 3 0 AAA domain AAA_PrkA PF08298.11 gi|15679033|ref|NP_276150.1| - 0.15 10.9 0.0 0.43 9.4 0.0 1.7 2 0 0 2 2 2 0 PrkA AAA domain Dus PF01207.17 gi|15679034|ref|NP_276151.1| - 2.9e-09 36.5 0.1 4e-09 36.0 0.1 1.1 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) PE PF00934.20 gi|15679034|ref|NP_276151.1| - 0.012 15.9 0.2 0.097 13.0 0.1 2.2 2 0 0 2 2 2 0 PE family His_biosynth PF00977.21 gi|15679034|ref|NP_276151.1| - 0.02 14.4 0.2 0.045 13.2 0.2 1.6 1 1 0 1 1 1 0 Histidine biosynthesis protein IMPDH PF00478.25 gi|15679034|ref|NP_276151.1| - 0.044 12.8 0.7 0.09 11.8 0.9 1.6 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain DUF3237 PF11578.8 gi|15679034|ref|NP_276151.1| - 0.12 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) GCH_III PF05165.12 gi|15679035|ref|NP_276152.1| - 4.1e-129 429.1 0.1 4.9e-129 428.8 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase III UPF0052 PF01933.18 gi|15679036|ref|NP_276153.1| - 7.9e-46 156.6 0.1 9.4e-46 156.4 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 F420_ligase PF01996.16 gi|15679037|ref|NP_276154.1| - 2.4e-66 223.6 0.1 3.1e-66 223.2 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase IMP_cyclohyd PF07826.11 gi|15679038|ref|NP_276155.1| - 3.7e-66 222.4 0.0 4.4e-66 222.1 0.0 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein HZS_alpha PF18582.1 gi|15679038|ref|NP_276155.1| - 0.13 12.7 0.0 19 5.8 0.0 2.3 2 0 0 2 2 2 0 Hydrazine synthase alpha subunit middle domain ExbD PF02472.16 gi|15679039|ref|NP_276156.1| - 3.4e-06 27.2 0.6 3.8e-06 27.1 0.6 1.3 1 1 0 1 1 1 1 Biopolymer transport protein ExbD/TolR DUF3341 PF11821.8 gi|15679039|ref|NP_276156.1| - 0.017 14.8 0.0 0.021 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) MotA_ExbB PF01618.16 gi|15679040|ref|NP_276157.1| - 4.9e-31 107.1 3.9 2.2e-30 105.0 0.9 2.8 2 2 2 4 4 4 1 MotA/TolQ/ExbB proton channel family PhaG_MnhG_YufB PF03334.14 gi|15679040|ref|NP_276157.1| - 0.065 13.5 4.6 0.69 10.2 0.0 2.3 2 0 0 2 2 2 0 Na+/H+ antiporter subunit RNase_HII PF01351.18 gi|15679041|ref|NP_276158.1| - 9.2e-70 234.5 0.0 1e-69 234.3 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII MreB_Mbl PF06723.13 gi|15679042|ref|NP_276159.1| - 7.2e-108 360.3 19.1 8.2e-108 360.1 19.1 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 gi|15679042|ref|NP_276159.1| - 1.2e-17 63.3 8.5 6.9e-16 57.6 6.2 2.1 1 1 0 2 2 2 2 Hsp70 protein Actin PF00022.19 gi|15679042|ref|NP_276159.1| - 2.4e-13 49.5 0.2 3.9e-06 25.7 0.0 2.1 1 1 1 2 2 2 2 Actin FtsA PF14450.6 gi|15679042|ref|NP_276159.1| - 1.7e-10 41.2 1.6 1.7e-10 41.2 1.6 2.2 2 1 0 2 2 2 1 Cell division protein FtsA PilM_2 PF11104.8 gi|15679042|ref|NP_276159.1| - 0.0088 15.1 0.1 3.5 6.5 0.0 2.3 2 0 0 2 2 2 2 Type IV pilus assembly protein PilM; PS_Dcarbxylase PF02666.15 gi|15679044|ref|NP_276161.1| - 2.9e-38 131.4 0.1 3.5e-38 131.2 0.1 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Peptidase_M23 PF01551.22 gi|15679044|ref|NP_276161.1| - 0.036 14.3 0.2 0.1 12.8 0.2 1.8 1 0 0 1 1 1 0 Peptidase family M23 CDP-OH_P_transf PF01066.21 gi|15679045|ref|NP_276162.1| - 6.1e-11 42.9 1.6 6.1e-11 42.9 1.6 3.1 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF4267 PF14087.6 gi|15679045|ref|NP_276162.1| - 0.19 11.8 0.1 0.19 11.8 0.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4267) DUF515 PF04415.12 gi|15679046|ref|NP_276163.1| - 1.8e-29 102.4 2.1 2.8e-13 49.1 0.0 3.0 1 1 1 2 2 2 2 Protein of unknown function (DUF515) RcpC PF16976.5 gi|15679046|ref|NP_276163.1| - 2.1e-09 37.5 1.3 1.2e-08 35.0 1.5 2.2 2 0 0 2 2 2 1 Flp pilus assembly protein RcpC/CpaB DUF4366 PF14283.6 gi|15679046|ref|NP_276163.1| - 0.051 13.6 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) Sortase PF04203.13 gi|15679048|ref|NP_276165.1| - 1.1e-16 60.7 0.0 1.4e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Sortase domain DHNA PF04038.12 gi|15679049|ref|NP_276166.1| - 9e-43 145.2 0.0 1.1e-42 145.0 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase Fer4 PF00037.27 gi|15679050|ref|NP_276167.1| - 1.7e-13 49.7 11.9 1.3e-06 27.9 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679050|ref|NP_276167.1| - 1.5e-10 41.0 18.8 1.5e-08 34.6 9.3 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679050|ref|NP_276167.1| - 3e-09 36.4 9.7 3.3e-05 23.7 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679050|ref|NP_276167.1| - 3.1e-09 37.3 7.5 3.8e-09 37.0 7.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679050|ref|NP_276167.1| - 3.5e-09 36.3 11.1 0.00024 21.0 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679050|ref|NP_276167.1| - 4.1e-09 36.4 10.9 1.5e-07 31.4 11.0 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679050|ref|NP_276167.1| - 6.9e-08 32.5 8.4 1.7e-07 31.3 8.6 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679050|ref|NP_276167.1| - 1.8e-07 32.0 6.3 0.0041 18.0 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15679050|ref|NP_276167.1| - 1.3e-06 28.5 10.5 0.0019 18.6 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15679050|ref|NP_276167.1| - 1.6e-05 25.4 10.5 0.005 17.4 1.9 2.1 1 1 1 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|15679050|ref|NP_276167.1| - 0.00071 20.1 11.8 0.03 14.9 12.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679050|ref|NP_276167.1| - 0.00098 19.5 10.9 0.14 12.6 2.5 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679050|ref|NP_276167.1| - 0.0012 19.6 14.8 0.15 13.0 4.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679050|ref|NP_276167.1| - 0.0055 17.4 12.9 3.5 8.4 12.7 2.3 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15679050|ref|NP_276167.1| - 0.0061 17.4 5.6 1.1 10.2 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|15679050|ref|NP_276167.1| - 0.025 14.7 2.9 0.051 13.7 2.9 1.5 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 gi|15679050|ref|NP_276167.1| - 0.18 12.0 7.3 0.88 9.8 0.8 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Ral PF11058.8 gi|15679050|ref|NP_276167.1| - 2.5 7.7 6.0 0.84 9.2 0.9 2.1 2 0 0 2 2 2 0 Antirestriction protein Ral AFP PF02420.15 gi|15679050|ref|NP_276167.1| - 6.9 7.4 8.6 1.7 9.3 1.6 2.8 2 1 0 2 2 2 0 Insect antifreeze protein repeat POR_N PF01855.19 gi|15679051|ref|NP_276168.1| - 2.1e-82 276.3 0.0 2.7e-82 276.0 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|15679051|ref|NP_276168.1| - 7.8e-21 74.3 0.1 1.3e-20 73.5 0.1 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15679051|ref|NP_276168.1| - 6.7e-06 26.0 0.0 1.6e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|15679051|ref|NP_276168.1| - 0.00029 20.5 0.2 0.00047 19.8 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15679052|ref|NP_276169.1| - 8.7e-34 116.5 0.0 1.2e-33 116.0 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR PF01558.18 gi|15679053|ref|NP_276170.1| - 7.2e-38 130.4 0.8 8.4e-38 130.2 0.8 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase ATP-grasp_2 PF08442.10 gi|15679054|ref|NP_276171.1| - 1.2e-69 234.0 0.2 2.1e-69 233.2 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|15679054|ref|NP_276171.1| - 4.9e-17 62.1 0.1 7.8e-17 61.5 0.1 1.3 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|15679054|ref|NP_276171.1| - 9.7e-15 54.6 0.7 4.1e-13 49.3 0.1 2.5 2 1 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|15679054|ref|NP_276171.1| - 0.00012 21.9 0.1 0.0002 21.2 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|15679054|ref|NP_276171.1| - 0.023 14.3 0.0 0.047 13.2 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|15679054|ref|NP_276171.1| - 0.047 13.2 0.3 0.089 12.3 0.1 1.6 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Peripla_BP_3 PF13377.6 gi|15679054|ref|NP_276171.1| - 0.085 13.2 0.1 0.18 12.1 0.1 1.5 1 0 0 1 1 1 0 Periplasmic binding protein-like domain Hydrolase PF00702.26 gi|15679054|ref|NP_276171.1| - 0.11 12.8 0.2 0.85 9.9 0.0 2.1 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase DUF2243 PF10002.9 gi|15679055|ref|NP_276172.1| - 8.2 6.5 12.6 0.072 13.2 0.9 3.1 3 2 1 4 4 4 0 Predicted membrane protein (DUF2243) DUF1002 PF06207.11 gi|15679056|ref|NP_276173.1| - 9e-56 188.9 5.8 1.1e-55 188.6 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1002) SpoVIF PF14069.6 gi|15679056|ref|NP_276173.1| - 0.00027 20.7 2.1 0.00058 19.6 2.1 1.5 1 0 0 1 1 1 1 Stage VI sporulation protein F Wyosine_form PF08608.12 gi|15679057|ref|NP_276174.1| - 1.8e-22 79.4 0.2 1.8e-21 76.2 0.0 2.3 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.21 gi|15679057|ref|NP_276174.1| - 2.5e-16 60.5 0.0 1.3e-15 58.2 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Transglut_core PF01841.19 gi|15679058|ref|NP_276175.1| - 6.7e-06 26.5 0.2 6.7e-06 26.5 0.2 2.3 1 1 1 2 2 2 1 Transglutaminase-like superfamily FliL PF03748.14 gi|15679058|ref|NP_276175.1| - 0.076 13.6 0.2 0.12 12.9 0.2 1.4 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL TIM PF00121.18 gi|15679059|ref|NP_276176.1| - 7.5e-10 38.6 0.1 1e-09 38.1 0.1 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase NMO PF03060.15 gi|15679059|ref|NP_276176.1| - 2.6e-05 23.8 1.4 2.6e-05 23.8 1.4 2.5 2 1 0 2 2 2 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|15679059|ref|NP_276176.1| - 0.0027 16.8 3.0 0.008 15.2 3.0 1.9 1 1 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|15679059|ref|NP_276176.1| - 0.0041 16.5 0.5 0.0041 16.5 0.5 2.0 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG Glu_synthase PF01645.17 gi|15679059|ref|NP_276176.1| - 0.032 13.4 1.2 0.046 12.9 0.3 1.7 1 1 1 2 2 2 0 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|15679059|ref|NP_276176.1| - 0.05 13.1 0.3 0.21 11.0 0.0 2.0 2 1 1 3 3 3 0 Histidine biosynthesis protein DFP PF04127.15 gi|15679059|ref|NP_276176.1| - 0.1 12.4 0.3 0.23 11.3 0.3 1.6 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein PGK PF00162.19 gi|15679060|ref|NP_276177.1| - 1.3e-112 376.5 0.0 1.5e-112 376.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase RNA_pol_Rpb5_C PF01191.19 gi|15679061|ref|NP_276178.1| - 4.8e-33 112.8 0.6 5.3e-33 112.7 0.6 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_1 PF04563.15 gi|15679062|ref|NP_276179.1| - 1.4e-52 178.2 0.1 1.7e-52 177.9 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 gi|15679062|ref|NP_276179.1| - 9.8e-27 92.9 0.0 2.2e-26 91.8 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 gi|15679062|ref|NP_276179.1| - 1e-25 90.5 2.4 2e-25 89.6 2.4 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_6 PF00562.28 gi|15679063|ref|NP_276180.1| - 1.2e-136 455.9 0.0 1.4e-136 455.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|15679063|ref|NP_276180.1| - 7.5e-31 106.4 0.9 2.7e-30 104.6 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|15679063|ref|NP_276180.1| - 1e-22 80.2 0.0 2.1e-22 79.2 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|15679063|ref|NP_276180.1| - 1e-12 48.4 4.1 1e-12 48.4 4.1 2.4 2 1 0 2 2 2 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_45 PF10385.9 gi|15679063|ref|NP_276180.1| - 0.0034 17.6 0.9 0.068 13.4 0.7 2.7 2 0 0 2 2 2 1 RNA polymerase beta subunit external 1 domain Auto_anti-p27 PF06677.12 gi|15679063|ref|NP_276180.1| - 0.029 14.5 1.4 0.059 13.5 1.4 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Fer2_4 PF13510.6 gi|15679063|ref|NP_276180.1| - 0.079 13.0 0.0 0.25 11.4 0.0 1.9 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain CO_dh PF02552.16 gi|15679063|ref|NP_276180.1| - 0.13 12.1 0.1 3.8 7.3 0.0 2.4 2 0 0 2 2 2 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit RNA_pol_Rpb1_1 PF04997.12 gi|15679064|ref|NP_276181.1| - 1.5e-102 343.2 0.0 2.4e-102 342.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|15679064|ref|NP_276181.1| - 8.4e-74 247.3 0.2 2.2e-73 246.0 0.1 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|15679064|ref|NP_276181.1| - 1.1e-34 119.7 0.0 2.2e-34 118.7 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|15679064|ref|NP_276181.1| - 4.6e-34 116.6 0.0 1.1e-33 115.3 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|15679064|ref|NP_276181.1| - 6.6e-25 88.0 0.0 1.3e-24 87.1 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 USP7_ICP0_bdg PF12436.8 gi|15679064|ref|NP_276181.1| - 0.042 13.2 0.0 0.075 12.3 0.0 1.3 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 DUF29 PF01724.16 gi|15679064|ref|NP_276181.1| - 0.079 13.2 0.4 0.32 11.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF29 DUF3659 PF12396.8 gi|15679064|ref|NP_276181.1| - 0.1 12.5 1.9 0.44 10.5 0.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) DUF2543 PF10820.8 gi|15679064|ref|NP_276181.1| - 0.14 12.3 0.2 0.4 10.9 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) zf-3CxxC PF13695.6 gi|15679064|ref|NP_276181.1| - 0.15 12.5 1.8 7.4 7.1 0.8 2.7 2 0 0 2 2 2 0 Zinc-binding domain zf-HC2 PF13490.6 gi|15679064|ref|NP_276181.1| - 0.27 11.5 4.7 2.4 8.5 0.8 3.8 2 0 0 2 2 2 0 Putative zinc-finger FAM75 PF14650.6 gi|15679064|ref|NP_276181.1| - 0.3 10.6 0.0 3.8 7.0 0.0 2.2 2 0 0 2 2 2 0 FAM75 family RNA_pol_Rpb1_5 PF04998.17 gi|15679065|ref|NP_276182.1| - 2.3e-56 191.2 0.6 3.2e-56 190.7 0.6 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SLC12 PF03522.15 gi|15679065|ref|NP_276182.1| - 0.015 14.4 0.4 0.03 13.4 0.4 1.4 1 0 0 1 1 1 0 Solute carrier family 12 Histone_HNS PF00816.21 gi|15679065|ref|NP_276182.1| - 0.76 10.6 9.3 1.1 10.2 0.2 3.6 4 0 0 4 4 4 0 H-NS histone family Ribosomal_L7Ae PF01248.26 gi|15679066|ref|NP_276183.1| - 2e-22 78.7 0.0 2.2e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KH_2 PF07650.17 gi|15679067|ref|NP_276184.1| - 9.5e-21 73.4 6.0 4.4e-15 55.3 0.5 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|15679067|ref|NP_276184.1| - 2.6e-14 53.0 3.8 4.5e-14 52.3 0.4 2.4 2 1 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|15679067|ref|NP_276184.1| - 5.4e-07 29.4 1.0 0.0025 17.6 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|15679067|ref|NP_276184.1| - 0.0009 19.0 5.4 0.0085 15.9 0.4 2.8 1 1 1 2 2 2 1 KH domain CinA_KH PF18146.1 gi|15679067|ref|NP_276184.1| - 0.0048 17.0 0.1 0.014 15.5 0.0 1.7 2 0 0 2 2 2 1 Damage-inducible protein CinA KH domain Ribosom_S12_S23 PF00164.25 gi|15679068|ref|NP_276185.1| - 8.7e-50 167.1 0.4 1.1e-49 166.8 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|15679069|ref|NP_276186.1| - 6.2e-43 146.0 5.6 7.5e-43 145.7 5.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Bestrophin PF01062.21 gi|15679069|ref|NP_276186.1| - 0.0084 15.5 0.3 0.013 15.0 0.1 1.4 2 0 0 2 2 2 1 Bestrophin, RFP-TM, chloride channel DinI PF06183.13 gi|15679069|ref|NP_276186.1| - 0.072 13.4 1.0 0.33 11.3 0.2 2.2 2 0 0 2 2 2 0 DinI-like family GTP_EFTU PF00009.27 gi|15679070|ref|NP_276187.1| - 2.6e-66 222.9 0.1 4.6e-66 222.1 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|15679070|ref|NP_276187.1| - 3.1e-28 98.0 0.4 1.2e-27 96.1 0.4 2.1 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_C PF00679.24 gi|15679070|ref|NP_276187.1| - 1.7e-24 85.7 0.2 6e-24 83.9 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|15679070|ref|NP_276187.1| - 1.1e-23 83.0 0.5 2.8e-23 81.8 0.5 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|15679070|ref|NP_276187.1| - 3e-13 50.0 1.4 9.2e-13 48.4 1.4 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15679070|ref|NP_276187.1| - 0.0017 18.4 0.0 0.0039 17.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase ATP-synt_F6 PF05511.11 gi|15679070|ref|NP_276187.1| - 0.11 13.0 0.1 1 9.8 0.0 2.6 3 0 0 3 3 3 0 Mitochondrial ATP synthase coupling factor 6 RsgA_GTPase PF03193.16 gi|15679070|ref|NP_276187.1| - 0.17 11.8 0.4 0.53 10.2 0.2 1.8 2 0 0 2 2 2 0 RsgA GTPase GTP_EFTU PF00009.27 gi|15679071|ref|NP_276188.1| - 1.9e-59 200.5 0.1 2.7e-59 200.0 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|15679071|ref|NP_276188.1| - 1.5e-37 128.4 0.6 3.8e-37 127.0 0.2 1.9 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|15679071|ref|NP_276188.1| - 1.4e-15 57.4 1.7 3.7e-15 56.1 1.7 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15679071|ref|NP_276188.1| - 2.2e-07 31.0 0.0 7.3e-07 29.3 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|15679071|ref|NP_276188.1| - 0.00025 21.0 0.4 0.099 12.5 0.2 2.3 1 1 1 2 2 2 2 RsgA GTPase GTP_EFTU_D4 PF14578.6 gi|15679071|ref|NP_276188.1| - 0.00077 19.3 2.3 0.0023 17.8 2.3 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 SRPRB PF09439.10 gi|15679071|ref|NP_276188.1| - 0.0015 18.0 0.1 0.0058 16.1 0.2 1.9 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 gi|15679071|ref|NP_276188.1| - 0.0016 18.0 0.7 0.019 14.5 0.3 2.6 2 1 0 2 2 2 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 gi|15679071|ref|NP_276188.1| - 0.0032 16.8 0.1 0.024 14.0 0.1 2.0 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 gi|15679071|ref|NP_276188.1| - 0.0055 15.9 0.1 1.1 8.4 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit Septin PF00735.18 gi|15679071|ref|NP_276188.1| - 0.0061 15.9 0.0 0.01 15.2 0.0 1.3 1 0 0 1 1 1 1 Septin Dynamin_N PF00350.23 gi|15679071|ref|NP_276188.1| - 0.11 12.6 0.0 12 5.9 0.0 2.5 1 1 1 2 2 2 0 Dynamin family Ribosomal_S10 PF00338.22 gi|15679072|ref|NP_276189.1| - 9.5e-27 93.1 0.0 1.1e-26 92.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|15679072|ref|NP_276189.1| - 0.028 15.2 0.0 0.055 14.3 0.0 1.5 2 0 0 2 2 2 0 Primosomal protein N C-terminal domain MtrA PF04208.14 gi|15679073|ref|NP_276190.1| - 5.2e-82 273.6 0.9 6.4e-82 273.3 0.9 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A TetR_N PF00440.23 gi|15679074|ref|NP_276191.1| - 9e-19 67.0 1.2 1.6e-18 66.2 1.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_29 PF17938.1 gi|15679074|ref|NP_276191.1| - 1.3e-06 28.5 0.0 3.4e-06 27.1 0.0 1.7 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|15679074|ref|NP_276191.1| - 4.6e-05 23.6 0.3 0.00011 22.4 0.0 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_21 PF17926.1 gi|15679074|ref|NP_276191.1| - 0.0041 17.2 1.1 0.033 14.3 0.0 2.3 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|15679074|ref|NP_276191.1| - 0.0062 16.7 0.0 0.0097 16.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase Blt1_C PF17183.4 gi|15679074|ref|NP_276191.1| - 0.023 14.3 0.1 0.046 13.3 0.1 1.4 1 0 0 1 1 1 0 Get5 carboxyl domain NYN PF01936.18 gi|15679075|ref|NP_276192.1| - 5.1e-17 62.7 0.0 6.5e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 NYN domain Usp PF00582.26 gi|15679076|ref|NP_276193.1| - 1.7e-31 109.6 0.2 2e-31 109.4 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family DXP_reductoisom PF02670.16 gi|15679076|ref|NP_276193.1| - 0.0053 17.5 0.1 0.0084 16.8 0.1 1.3 1 1 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase PAS_5 PF07310.13 gi|15679076|ref|NP_276193.1| - 0.039 13.7 0.0 0.052 13.3 0.0 1.2 1 0 0 1 1 1 0 PAS domain DUF3926 PF13080.6 gi|15679076|ref|NP_276193.1| - 0.042 13.8 0.3 0.071 13.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3926) RRG8 PF17068.5 gi|15679076|ref|NP_276193.1| - 0.07 12.5 0.1 0.081 12.3 0.1 1.1 1 0 0 1 1 1 0 Required for respiratory growth protein 8 mitochondrial CCDC117 PF15810.5 gi|15679076|ref|NP_276193.1| - 0.1 12.9 1.3 0.21 11.9 0.3 1.8 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 117 GT-D PF08759.11 gi|15679076|ref|NP_276193.1| - 0.11 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold GyrI-like PF06445.15 gi|15679077|ref|NP_276194.1| - 0.00013 22.3 0.0 0.042 14.1 0.0 2.0 1 1 1 2 2 2 2 GyrI-like small molecule binding domain Cass2 PF14526.6 gi|15679077|ref|NP_276194.1| - 0.00013 22.2 0.0 0.0012 19.0 0.0 1.9 1 1 0 1 1 1 1 Integron-associated effector binding protein YAF2_RYBP PF17219.3 gi|15679077|ref|NP_276194.1| - 0.12 12.0 0.1 0.22 11.1 0.1 1.5 1 0 0 1 1 1 0 Yaf2/RYBP C-terminal binding motif SepSecS PF05889.13 gi|15679078|ref|NP_276195.1| - 9.2e-40 136.5 0.0 1.3e-39 136.1 0.0 1.1 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|15679078|ref|NP_276195.1| - 3.5e-16 59.1 0.0 7.9e-16 58.0 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|15679078|ref|NP_276195.1| - 8.4e-12 44.9 0.0 2.4e-11 43.5 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|15679078|ref|NP_276195.1| - 1.3e-06 28.0 0.0 8e-06 25.4 0.0 2.1 3 0 0 3 3 3 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|15679078|ref|NP_276195.1| - 1.1e-05 24.3 0.0 2.2e-05 23.4 0.0 1.4 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Beta_elim_lyase PF01212.21 gi|15679078|ref|NP_276195.1| - 0.00098 18.5 0.0 0.0013 18.0 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|15679078|ref|NP_276195.1| - 0.071 11.6 0.0 0.12 10.9 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme NTPase_1 PF03266.15 gi|15679079|ref|NP_276196.1| - 3.9e-56 189.6 0.1 4.3e-56 189.4 0.1 1.0 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|15679079|ref|NP_276196.1| - 6.3e-05 22.8 0.2 0.00025 20.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain DUF2478 PF10649.9 gi|15679079|ref|NP_276196.1| - 9.7e-05 22.0 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2478) AAA_18 PF13238.6 gi|15679079|ref|NP_276196.1| - 0.00038 21.0 0.0 0.00047 20.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|15679079|ref|NP_276196.1| - 0.002 17.6 0.0 0.0033 16.9 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MeaB PF03308.16 gi|15679079|ref|NP_276196.1| - 0.0039 16.2 0.3 0.0061 15.6 0.3 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|15679079|ref|NP_276196.1| - 0.0044 17.4 0.1 0.0048 17.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15679079|ref|NP_276196.1| - 0.0056 16.4 0.2 0.0095 15.7 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15679079|ref|NP_276196.1| - 0.0067 16.7 0.8 0.044 14.0 0.4 2.3 1 1 1 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|15679079|ref|NP_276196.1| - 0.0095 16.0 0.6 0.12 12.4 0.6 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase ATPase PF06745.13 gi|15679079|ref|NP_276196.1| - 0.011 15.2 0.5 0.99 8.7 0.1 2.3 2 0 0 2 2 2 0 KaiC ATP_bind_1 PF03029.17 gi|15679079|ref|NP_276196.1| - 0.013 15.3 0.2 0.023 14.5 0.2 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_5 PF07728.14 gi|15679079|ref|NP_276196.1| - 0.022 14.8 0.4 0.16 12.0 0.1 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|15679079|ref|NP_276196.1| - 0.023 15.1 0.1 0.073 13.5 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) APS_kinase PF01583.20 gi|15679079|ref|NP_276196.1| - 0.036 14.0 0.1 0.078 12.9 0.0 1.6 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_24 PF13479.6 gi|15679079|ref|NP_276196.1| - 0.039 13.7 0.2 0.3 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|15679079|ref|NP_276196.1| - 0.065 13.5 0.5 0.19 11.9 0.1 1.9 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|15679079|ref|NP_276196.1| - 0.082 12.8 0.4 0.43 10.5 0.1 1.9 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 gi|15679079|ref|NP_276196.1| - 0.095 13.1 1.3 0.39 11.2 0.2 2.0 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|15679079|ref|NP_276196.1| - 0.099 12.3 0.2 0.36 10.4 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 gi|15679079|ref|NP_276196.1| - 0.17 12.3 0.1 0.35 11.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase AAA_25 PF13481.6 gi|15679079|ref|NP_276196.1| - 0.2 11.2 0.7 6.1 6.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain Radical_SAM PF04055.21 gi|15679080|ref|NP_276197.1| - 8.9e-15 55.5 0.0 1.6e-14 54.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679080|ref|NP_276197.1| - 1.9e-07 31.4 0.0 3e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679080|ref|NP_276197.1| - 4.9e-05 23.5 0.0 8.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain PmbA_TldD PF01523.16 gi|15679081|ref|NP_276198.1| - 4.5e-56 190.7 0.3 5.7e-56 190.4 0.3 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Hydrolase_3 PF08282.12 gi|15679082|ref|NP_276199.1| - 9.4e-34 117.3 0.4 2.3e-22 80.0 0.1 2.0 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|15679082|ref|NP_276199.1| - 6.4e-10 39.0 0.0 1.7e-07 31.1 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|15679082|ref|NP_276199.1| - 1.4e-08 35.3 2.0 0.00035 20.9 0.0 3.1 1 1 2 3 3 3 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15679082|ref|NP_276199.1| - 1.1e-05 25.9 3.1 0.13 12.7 0.0 3.3 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|15679082|ref|NP_276199.1| - 0.00049 20.2 0.4 0.0061 16.7 0.0 2.3 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|15679082|ref|NP_276199.1| - 0.0039 17.3 0.0 0.03 14.4 0.0 2.2 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15679082|ref|NP_276199.1| - 0.013 15.6 0.4 0.11 12.5 0.1 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like Trehalose_PPase PF02358.16 gi|15679082|ref|NP_276199.1| - 0.11 11.6 0.0 0.34 10.0 0.0 1.8 2 0 0 2 2 2 0 Trehalose-phosphatase DUF2608 PF11019.8 gi|15679082|ref|NP_276199.1| - 0.23 10.9 0.0 0.36 10.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) HypD PF01924.16 gi|15679083|ref|NP_276200.1| - 1e-146 488.5 0.1 1.2e-146 488.4 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family Na_Ca_ex PF01699.24 gi|15679084|ref|NP_276201.1| - 1.1e-54 184.5 39.7 1.9e-28 99.4 15.0 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Fanconi_A PF03511.14 gi|15679084|ref|NP_276201.1| - 3 7.8 4.6 1.8 8.5 0.1 2.4 2 0 0 2 2 2 0 Fanconi anaemia group A protein DUF11 PF01345.18 gi|15679085|ref|NP_276202.1| - 4e-192 623.2 116.4 1.5e-24 86.1 0.3 11.9 10 1 1 11 11 10 9 Domain of unknown function DUF11 CARDB PF07705.11 gi|15679085|ref|NP_276202.1| - 9.9e-20 70.7 74.6 7.4e-05 22.9 1.1 12.3 10 4 1 11 11 11 8 CARDB TRAP_beta PF05753.14 gi|15679085|ref|NP_276202.1| - 1.4e-13 50.6 30.4 0.059 12.8 0.0 9.2 9 0 0 9 9 9 6 Translocon-associated protein beta (TRAPB) bMG10 PF17973.1 gi|15679085|ref|NP_276202.1| - 1.8e-12 47.6 14.6 0.09 13.0 0.0 9.3 10 0 0 10 10 10 4 Bacterial Alpha-2-macroglobulin MG10 domain NPCBM_assoc PF10633.9 gi|15679085|ref|NP_276202.1| - 1.8e-09 37.7 45.1 0.44 10.8 0.1 13.8 13 1 0 13 13 13 5 NPCBM-associated, NEW3 domain of alpha-galactosidase Integrin_alpha2 PF08441.12 gi|15679085|ref|NP_276202.1| - 3.2e-08 32.9 1.0 1.6 7.6 0.0 6.4 6 0 0 6 6 6 2 Integrin alpha CarboxypepD_reg PF13620.6 gi|15679085|ref|NP_276202.1| - 2.5e-05 24.5 2.0 2.5e-05 24.5 2.0 8.6 8 2 2 10 10 9 1 Carboxypeptidase regulatory-like domain YtkA PF13115.6 gi|15679085|ref|NP_276202.1| - 0.12 13.0 0.2 5.6 7.6 0.0 3.6 2 0 0 2 2 2 0 YtkA-like Chlam_OMP6 PF03504.13 gi|15679085|ref|NP_276202.1| - 0.27 11.5 19.9 8.1 6.8 0.0 7.6 10 0 0 10 10 10 0 Chlamydia cysteine-rich outer membrane protein 6 Big_6 PF17936.1 gi|15679085|ref|NP_276202.1| - 0.65 10.3 11.1 0.086 13.1 0.5 4.5 3 0 0 3 3 3 0 Bacterial Ig domain bMG3 PF11974.8 gi|15679085|ref|NP_276202.1| - 0.99 9.5 5.1 0.56 10.3 0.1 3.2 4 0 0 4 4 4 0 Bacterial alpha-2-macroglobulin MG3 domain Methyltransf_11 PF08241.12 gi|15679086|ref|NP_276203.1| - 0.00097 19.7 0.0 0.012 16.2 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15679086|ref|NP_276203.1| - 0.0048 17.6 0.0 0.12 13.1 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase domain Cas_Cas02710 PF09670.10 gi|15679087|ref|NP_276204.1| - 1.5e-121 405.8 4.8 1.8e-121 405.6 4.8 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) DUF1887 PF09002.11 gi|15679087|ref|NP_276204.1| - 1.6e-05 23.8 0.5 2.6e-05 23.1 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) Cas_DxTHG PF09455.10 gi|15679087|ref|NP_276204.1| - 5.8e-05 22.9 2.2 8.1e-05 22.4 2.2 1.3 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family TPR_19 PF14559.6 gi|15679087|ref|NP_276204.1| - 0.012 16.1 0.7 5.5 7.6 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Cas_APE2256 PF09651.10 gi|15679087|ref|NP_276204.1| - 0.028 14.3 0.0 0.077 12.9 0.0 1.7 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_APE2256) DUF4417 PF14386.6 gi|15679087|ref|NP_276204.1| - 0.12 12.0 0.0 0.3 10.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4417) TPR_12 PF13424.6 gi|15679087|ref|NP_276204.1| - 1.7 9.0 8.8 7.3 7.0 0.6 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat RAMPs PF03787.15 gi|15679089|ref|NP_276206.1| - 1.2e-18 68.0 1.5 1.5e-18 67.7 1.5 1.1 1 0 0 1 1 1 1 RAMP superfamily Mlp PF03304.13 gi|15679089|ref|NP_276206.1| - 0.011 15.9 0.7 0.033 14.4 0.2 2.0 2 0 0 2 2 2 0 Mlp lipoprotein family DIX PF00778.17 gi|15679089|ref|NP_276206.1| - 0.023 14.5 0.1 0.047 13.5 0.1 1.5 1 0 0 1 1 1 0 DIX domain Csm4_C PF17953.1 gi|15679090|ref|NP_276207.1| - 3.4e-05 23.6 0.0 6.6e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 CRISPR Csm4 C-terminal domain RAMPs PF03787.15 gi|15679091|ref|NP_276208.1| - 1.2e-17 64.6 0.2 1.5e-17 64.3 0.2 1.1 1 0 0 1 1 1 1 RAMP superfamily Csm2_III-A PF03750.13 gi|15679092|ref|NP_276209.1| - 5.8e-27 94.8 0.4 7.8e-27 94.4 0.4 1.2 1 0 0 1 1 1 1 Csm2 Type III-A CsoSCA PF08936.10 gi|15679092|ref|NP_276209.1| - 0.021 13.5 0.0 0.032 12.9 0.0 1.2 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase BRE1 PF08647.11 gi|15679092|ref|NP_276209.1| - 0.099 12.7 1.0 0.16 12.0 1.0 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase CH_2 PF06294.11 gi|15679092|ref|NP_276209.1| - 0.13 12.4 0.1 1.2 9.3 0.0 2.1 1 1 1 2 2 2 0 CH-like domain in sperm protein Csm1_B PF18211.1 gi|15679093|ref|NP_276210.1| - 1.9e-27 94.9 0.0 7.2e-26 89.9 0.0 2.7 2 0 0 2 2 2 1 Csm1 subunit domain B HD PF01966.22 gi|15679093|ref|NP_276210.1| - 3.1e-11 43.6 0.4 1.4e-10 41.4 0.1 2.2 2 0 0 2 2 2 1 HD domain zf-C4pol PF14260.6 gi|15679093|ref|NP_276210.1| - 0.57 10.7 4.2 15 6.1 0.5 2.6 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta DZR PF12773.7 gi|15679093|ref|NP_276210.1| - 3.1 7.9 6.0 13 5.9 0.9 2.4 2 0 0 2 2 2 0 Double zinc ribbon CRISPR_Cas2 PF09827.9 gi|15679094|ref|NP_276211.1| - 4.3e-20 71.7 0.8 5.2e-20 71.4 0.8 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 GTP-bdg_N PF13167.6 gi|15679094|ref|NP_276211.1| - 0.11 13.2 0.0 0.14 12.9 0.0 1.2 1 0 0 1 1 1 0 GTP-binding GTPase N-terminal Cas_Cas1 PF01867.16 gi|15679095|ref|NP_276212.1| - 9.7e-87 290.7 0.1 1.2e-86 290.4 0.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 DUF2113 PF09886.9 gi|15679095|ref|NP_276212.1| - 0.093 12.1 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) Cas_Cas4 PF01930.17 gi|15679096|ref|NP_276213.1| - 1.2e-57 194.5 0.2 1.4e-57 194.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|15679096|ref|NP_276213.1| - 2.3e-06 27.7 0.3 6.4e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DEAD PF00270.29 gi|15679097|ref|NP_276214.1| - 1.9e-08 34.3 0.0 4.7e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase HD_6 PF18019.1 gi|15679097|ref|NP_276214.1| - 6.4e-06 26.4 0.0 1.2e-05 25.6 0.0 1.5 1 1 0 1 1 1 1 HD domain Helicase_C PF00271.31 gi|15679097|ref|NP_276214.1| - 1.6e-05 25.2 0.5 6.8e-05 23.2 0.5 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15679097|ref|NP_276214.1| - 0.029 14.4 2.4 1 9.3 0.0 3.0 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit V-ATPase_H_C PF11698.8 gi|15679097|ref|NP_276214.1| - 0.79 9.9 3.3 3.5 7.8 0.1 3.2 3 0 0 3 3 3 0 V-ATPase subunit H Cas_Cas5d PF09704.10 gi|15679098|ref|NP_276215.1| - 2.3e-33 115.9 0.0 2.6e-33 115.7 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DevR PF01905.16 gi|15679099|ref|NP_276216.1| - 3.8e-73 245.9 0.2 4.6e-73 245.6 0.2 1.1 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 Pox_VLTF3 PF04947.14 gi|15679100|ref|NP_276217.1| - 0.0022 17.7 0.2 0.0025 17.5 0.2 1.1 1 0 0 1 1 1 1 Poxvirus Late Transcription Factor VLTF3 like Cas_Cas6 PF01881.16 gi|15679102|ref|NP_276219.1| - 1.3e-40 139.3 0.2 1.5e-40 139.1 0.2 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas6 CRISPR_Cas6 PF10040.9 gi|15679102|ref|NP_276219.1| - 0.02 15.5 0.1 0.044 14.4 0.1 1.7 1 1 0 1 1 1 0 CRISPR-associated endoribonuclease Cas6 ABC2_membrane PF01061.24 gi|15679103|ref|NP_276220.1| - 4.2e-39 134.2 23.0 4.2e-39 134.2 23.0 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|15679103|ref|NP_276220.1| - 1.9e-13 50.3 31.3 1.9e-13 50.3 31.3 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|15679103|ref|NP_276220.1| - 0.00029 20.2 25.8 0.00029 20.2 25.8 2.3 1 1 2 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|15679103|ref|NP_276220.1| - 0.03 14.3 23.8 0.19 11.6 17.2 3.2 1 1 1 2 2 2 0 ABC-2 family transporter protein Gram_pos_anchor PF00746.21 gi|15679103|ref|NP_276220.1| - 1.7 8.6 0.0 1.7 8.6 0.0 3.1 5 0 0 5 5 5 0 LPXTG cell wall anchor motif Papilloma_E5 PF03025.14 gi|15679103|ref|NP_276220.1| - 4.9 7.4 15.4 0.47 10.6 1.6 3.4 3 0 0 3 3 3 0 Papillomavirus E5 ABC_tran PF00005.27 gi|15679104|ref|NP_276221.1| - 2e-29 102.8 0.0 3.5e-29 102.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679104|ref|NP_276221.1| - 1.2e-11 45.0 0.1 4.1e-07 30.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|15679104|ref|NP_276221.1| - 5.8e-10 39.7 0.8 1e-09 39.0 0.1 1.8 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|15679104|ref|NP_276221.1| - 0.00018 22.1 0.2 0.00037 21.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15679104|ref|NP_276221.1| - 0.0043 17.4 0.0 0.0076 16.6 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15679104|ref|NP_276221.1| - 0.0054 16.4 0.1 0.0093 15.7 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|15679104|ref|NP_276221.1| - 0.0058 17.1 0.0 0.072 13.5 0.0 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|15679104|ref|NP_276221.1| - 0.0082 15.6 0.0 1.9 7.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15679104|ref|NP_276221.1| - 0.019 14.7 0.1 3 7.4 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|15679104|ref|NP_276221.1| - 0.041 13.6 0.0 0.079 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|15679104|ref|NP_276221.1| - 0.047 13.3 0.1 0.084 12.5 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DLIC PF05783.11 gi|15679104|ref|NP_276221.1| - 0.062 12.1 0.0 0.09 11.6 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) cobW PF02492.19 gi|15679104|ref|NP_276221.1| - 0.13 11.9 0.1 0.26 10.9 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 gi|15679105|ref|NP_276222.1| - 8.1e-105 349.3 0.0 3.7e-67 226.1 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_25 PF13481.6 gi|15679105|ref|NP_276222.1| - 1.7e-16 60.4 0.0 2.4e-07 30.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain RecA PF00154.21 gi|15679105|ref|NP_276222.1| - 3.7e-10 39.7 0.2 0.0006 19.4 0.1 2.4 2 1 0 2 2 2 2 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|15679105|ref|NP_276222.1| - 6.5e-10 38.8 0.0 6e-05 22.5 0.0 2.1 2 0 0 2 2 2 2 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|15679105|ref|NP_276222.1| - 1e-09 39.0 0.0 0.0022 18.4 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|15679105|ref|NP_276222.1| - 1.5e-09 38.3 0.1 6.1e-05 23.3 0.0 2.9 2 1 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|15679105|ref|NP_276222.1| - 3.6e-08 33.3 0.0 0.0018 18.0 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein Rad51 PF08423.11 gi|15679105|ref|NP_276222.1| - 2e-07 30.5 0.3 0.018 14.3 0.0 2.2 2 0 0 2 2 2 2 Rad51 DUF2075 PF09848.9 gi|15679105|ref|NP_276222.1| - 3.1e-06 26.7 0.0 0.067 12.4 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.6 gi|15679105|ref|NP_276222.1| - 8.1e-06 26.2 0.1 0.14 12.4 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|15679105|ref|NP_276222.1| - 9.8e-06 25.4 0.1 0.026 14.2 0.1 2.5 2 1 0 2 2 2 2 AAA domain PAXNEB PF05625.11 gi|15679105|ref|NP_276222.1| - 5.6e-05 22.4 0.5 0.00032 20.0 0.0 2.2 3 0 0 3 3 3 1 PAXNEB protein AAA_7 PF12775.7 gi|15679105|ref|NP_276222.1| - 0.0001 21.9 0.0 0.33 10.4 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA PF00004.29 gi|15679105|ref|NP_276222.1| - 0.00022 21.7 0.0 0.21 12.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|15679105|ref|NP_276222.1| - 0.00036 20.6 0.0 0.12 12.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 gi|15679105|ref|NP_276222.1| - 0.00053 19.5 0.1 4 6.8 0.0 3.1 3 0 0 3 3 3 1 Bacterial TniB protein AAA_19 PF13245.6 gi|15679105|ref|NP_276222.1| - 0.00065 20.1 0.0 0.13 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain GvpD PF07088.11 gi|15679105|ref|NP_276222.1| - 0.00073 18.3 0.8 3.1 6.3 0.1 3.6 3 1 1 4 4 4 2 GvpD gas vesicle protein Zeta_toxin PF06414.12 gi|15679105|ref|NP_276222.1| - 0.0012 18.1 0.0 0.051 12.8 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin NACHT PF05729.12 gi|15679105|ref|NP_276222.1| - 0.0013 18.7 0.1 0.29 11.0 0.0 2.6 2 1 0 2 2 2 1 NACHT domain TrwB_AAD_bind PF10412.9 gi|15679105|ref|NP_276222.1| - 0.0024 16.9 0.0 0.47 9.3 0.0 2.3 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Sigma54_activat PF00158.26 gi|15679105|ref|NP_276222.1| - 0.0026 17.5 0.0 2 8.1 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain ResIII PF04851.15 gi|15679105|ref|NP_276222.1| - 0.003 17.6 0.0 0.85 9.6 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_29 PF13555.6 gi|15679105|ref|NP_276222.1| - 0.0038 16.9 2.4 2.1 8.2 0.5 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain T2SSE PF00437.20 gi|15679105|ref|NP_276222.1| - 0.004 16.3 0.6 0.022 13.8 0.0 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein DEAD PF00270.29 gi|15679105|ref|NP_276222.1| - 0.0054 16.5 0.0 0.33 10.7 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase ABC_tran PF00005.27 gi|15679105|ref|NP_276222.1| - 0.0054 17.2 0.9 0.22 12.1 0.0 2.4 2 0 0 2 2 2 1 ABC transporter AAA_30 PF13604.6 gi|15679105|ref|NP_276222.1| - 0.0078 16.0 0.1 5.4 6.7 0.1 2.7 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|15679105|ref|NP_276222.1| - 0.017 15.1 0.0 0.92 9.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|15679105|ref|NP_276222.1| - 0.022 14.4 0.0 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain TIP49 PF06068.13 gi|15679105|ref|NP_276222.1| - 0.027 13.7 0.3 1.8 7.7 0.1 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain cobW PF02492.19 gi|15679105|ref|NP_276222.1| - 0.031 13.9 0.1 0.14 11.7 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_11 PF13086.6 gi|15679105|ref|NP_276222.1| - 0.039 13.7 0.0 0.34 10.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|15679105|ref|NP_276222.1| - 0.04 14.5 0.2 4.3 7.9 0.0 2.8 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|15679105|ref|NP_276222.1| - 0.047 14.1 0.0 11 6.5 0.0 2.4 2 0 0 2 2 2 0 RNA helicase UvrD-helicase PF00580.21 gi|15679105|ref|NP_276222.1| - 0.059 12.9 0.2 0.85 9.1 0.0 2.1 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_33 PF13671.6 gi|15679105|ref|NP_276222.1| - 0.084 13.0 0.0 3.4 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|15679105|ref|NP_276222.1| - 0.089 12.1 1.0 11 5.3 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family SRP54 PF00448.22 gi|15679105|ref|NP_276222.1| - 0.089 12.4 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain PhoH PF02562.16 gi|15679105|ref|NP_276222.1| - 0.12 11.8 0.4 6.3 6.2 0.2 2.3 2 0 0 2 2 2 0 PhoH-like protein Roc PF08477.13 gi|15679105|ref|NP_276222.1| - 0.17 12.1 0.0 2.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_23 PF13476.6 gi|15679105|ref|NP_276222.1| - 0.91 10.0 2.4 9.3 6.7 0.3 2.3 2 0 0 2 2 2 0 AAA domain KaiB PF07689.12 gi|15679106|ref|NP_276223.1| - 3e-22 78.1 0.0 3.4e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 KaiB domain Thioredoxin PF00085.20 gi|15679106|ref|NP_276223.1| - 0.08 12.9 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Rhodanese PF00581.20 gi|15679107|ref|NP_276224.1| - 1.9e-11 44.4 0.0 4e-08 33.7 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain MEDS PF14417.6 gi|15679107|ref|NP_276224.1| - 2.8e-05 24.0 0.0 5.5e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Pyridox_ox_2 PF12900.7 gi|15679108|ref|NP_276225.1| - 3e-21 75.9 0.0 3.6e-21 75.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|15679108|ref|NP_276225.1| - 3.6e-05 23.9 0.0 4.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase CKS PF01111.19 gi|15679108|ref|NP_276225.1| - 0.028 14.7 0.0 0.045 14.0 0.0 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit UbiA PF01040.18 gi|15679109|ref|NP_276226.1| - 3.4e-42 144.5 17.0 3.4e-42 144.5 17.0 1.2 1 1 0 1 1 1 1 UbiA prenyltransferase family 2TM PF13239.6 gi|15679110|ref|NP_276227.1| - 2.7 8.3 0.0 2.7 8.3 0.0 3.1 2 1 0 2 2 2 0 2TM domain Thymidylate_kin PF02223.17 gi|15679111|ref|NP_276228.1| - 2.8e-44 151.0 0.0 3.2e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_18 PF13238.6 gi|15679111|ref|NP_276228.1| - 8.7e-05 23.1 0.0 0.0015 19.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain Vir_act_alpha_C PF10400.9 gi|15679111|ref|NP_276228.1| - 0.059 14.1 0.5 0.14 12.9 0.1 1.7 2 1 0 2 2 2 0 Virulence activator alpha C-term ADK PF00406.22 gi|15679111|ref|NP_276228.1| - 0.092 12.9 0.0 6.3 6.9 0.0 2.1 2 0 0 2 2 2 0 Adenylate kinase Lactamase_B PF00753.27 gi|15679112|ref|NP_276229.1| - 9.8e-12 45.3 2.1 1.9e-11 44.4 1.2 1.9 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15679112|ref|NP_276229.1| - 6.1e-06 25.9 0.0 1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|15679112|ref|NP_276229.1| - 0.053 12.9 0.0 0.077 12.4 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15679112|ref|NP_276229.1| - 0.15 12.0 0.0 0.44 10.4 0.0 1.7 2 0 0 2 2 2 0 Beta-lactamase superfamily domain DUF805 PF05656.14 gi|15679113|ref|NP_276230.1| - 2.9 8.3 6.3 0.46 10.9 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF805) DUF2839 PF10999.8 gi|15679115|ref|NP_276232.1| - 0.13 12.7 0.2 0.37 11.2 0.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2839) Inos-1-P_synth PF01658.17 gi|15679116|ref|NP_276233.1| - 7.8e-33 113.0 0.0 1.1e-32 112.4 0.0 1.3 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|15679116|ref|NP_276233.1| - 0.0087 15.5 0.0 0.039 13.3 0.0 2.0 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 gi|15679116|ref|NP_276233.1| - 0.12 12.6 0.0 0.27 11.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Fer4 PF00037.27 gi|15679117|ref|NP_276234.1| - 5.3e-12 45.0 22.6 4.9e-07 29.3 6.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679117|ref|NP_276234.1| - 1.9e-09 37.5 28.2 1.4e-08 34.7 13.8 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679117|ref|NP_276234.1| - 2e-09 37.9 10.6 2.8e-05 24.6 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679117|ref|NP_276234.1| - 6.5e-09 35.4 13.6 5.2e-05 23.1 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679117|ref|NP_276234.1| - 2.2e-07 30.9 14.8 5.1e-07 29.8 15.1 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679117|ref|NP_276234.1| - 7.3e-07 29.2 30.9 4.4e-05 23.5 19.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679117|ref|NP_276234.1| - 7.9e-07 29.9 11.0 0.0029 18.5 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|15679117|ref|NP_276234.1| - 8.1e-07 28.9 19.2 2e-05 24.5 5.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679117|ref|NP_276234.1| - 1.2e-06 28.9 8.3 0.0013 19.2 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679117|ref|NP_276234.1| - 1.3e-05 25.3 19.1 0.0064 16.9 3.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679117|ref|NP_276234.1| - 2.2e-05 24.8 11.2 0.005 17.2 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679117|ref|NP_276234.1| - 0.0008 20.2 18.4 0.15 13.1 5.7 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15679117|ref|NP_276234.1| - 0.0054 16.9 16.8 0.025 14.8 3.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679117|ref|NP_276234.1| - 0.22 12.4 9.7 0.4 11.6 0.2 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679117|ref|NP_276234.1| - 0.39 11.3 19.9 17 6.0 19.9 2.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15679117|ref|NP_276234.1| - 0.68 10.7 18.9 32 5.4 18.9 2.5 1 1 0 1 1 1 0 4Fe-4S single cluster domain PYC_OADA PF02436.18 gi|15679118|ref|NP_276235.1| - 1.2e-54 185.1 0.1 3.1e-54 183.8 0.0 1.6 2 0 0 2 2 2 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|15679118|ref|NP_276235.1| - 3.7e-42 144.7 0.0 5.2e-42 144.2 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|15679118|ref|NP_276235.1| - 4.5e-18 64.8 8.6 9.2e-18 63.9 8.6 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|15679118|ref|NP_276235.1| - 2.7e-09 36.7 2.5 0.0003 20.6 0.9 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|15679118|ref|NP_276235.1| - 0.00076 20.2 1.2 0.22 12.3 0.2 2.5 2 0 0 2 2 2 1 HlyD family secretion protein HlyD_D23 PF16576.5 gi|15679118|ref|NP_276235.1| - 0.0023 17.2 2.5 0.16 11.2 0.4 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion QRPTase_N PF02749.16 gi|15679118|ref|NP_276235.1| - 0.0084 16.1 0.9 0.75 9.9 0.2 2.6 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain DUF2118 PF09891.9 gi|15679118|ref|NP_276235.1| - 0.011 15.7 0.7 0.054 13.4 0.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) GCV_H PF01597.19 gi|15679118|ref|NP_276235.1| - 0.038 13.9 1.7 0.086 12.7 1.7 1.5 1 0 0 1 1 1 0 Glycine cleavage H-protein NQRA PF05896.11 gi|15679118|ref|NP_276235.1| - 0.047 13.1 1.5 0.083 12.3 1.5 1.4 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) RnfC_N PF13375.6 gi|15679118|ref|NP_276235.1| - 0.14 12.1 2.8 0.32 11.0 1.8 2.0 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.22 gi|15679118|ref|NP_276235.1| - 0.2 11.9 0.7 0.82 9.9 0.2 2.1 1 1 1 2 2 2 0 Peptidase family M23 ATP-synt_ab_Xtn PF16886.5 gi|15679118|ref|NP_276235.1| - 0.41 10.5 2.0 0.97 9.3 2.0 1.7 1 0 0 1 1 1 0 ATPsynthase alpha/beta subunit N-term extension Peptidase_M3_N PF08439.10 gi|15679118|ref|NP_276235.1| - 0.48 10.7 1.6 6.2 7.2 0.0 3.3 3 1 1 4 4 4 0 Oligopeptidase F QueC PF06508.13 gi|15679119|ref|NP_276236.1| - 2.2e-68 229.9 0.0 2.4e-68 229.8 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|15679119|ref|NP_276236.1| - 5.9e-09 36.1 0.1 7.9e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|15679119|ref|NP_276236.1| - 4.5e-07 29.7 0.0 0.00064 19.4 0.0 2.2 2 0 0 2 2 2 2 Thiamine biosynthesis protein (ThiI) NAD_synthase PF02540.17 gi|15679119|ref|NP_276236.1| - 0.00067 18.8 0.0 0.0014 17.8 0.0 1.4 2 0 0 2 2 2 1 NAD synthase ATP_bind_3 PF01171.20 gi|15679119|ref|NP_276236.1| - 0.0018 18.0 0.0 0.017 14.9 0.0 2.0 2 0 0 2 2 2 1 PP-loop family tRNA_Me_trans PF03054.16 gi|15679119|ref|NP_276236.1| - 0.0025 16.7 0.0 0.0039 16.0 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase Arginosuc_synth PF00764.19 gi|15679119|ref|NP_276236.1| - 0.038 13.3 0.0 0.098 11.9 0.0 1.6 2 0 0 2 2 2 0 Arginosuccinate synthase Glyco_trans_1_4 PF13692.6 gi|15679119|ref|NP_276236.1| - 0.17 12.3 0.0 0.28 11.6 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF111 PF01969.17 gi|15679120|ref|NP_276237.1| - 4.2e-118 394.7 0.0 4.8e-118 394.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Nit_Regul_Hom PF10126.9 gi|15679121|ref|NP_276238.1| - 1.8e-46 156.5 0.3 2.3e-46 156.2 0.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII PgpA PF04608.13 gi|15679122|ref|NP_276239.1| - 2.9e-11 43.6 0.1 4.3e-11 43.0 0.1 1.3 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobS PF02654.15 gi|15679123|ref|NP_276240.1| - 5.8e-37 127.9 16.0 6.6e-37 127.7 16.0 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase Trm56 PF01994.16 gi|15679124|ref|NP_276241.1| - 7.5e-46 154.9 0.0 1.1e-45 154.4 0.0 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 UPRTase PF14681.6 gi|15679125|ref|NP_276242.1| - 8.5e-41 139.7 0.0 9.6e-41 139.5 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|15679125|ref|NP_276242.1| - 7.6e-10 38.5 0.1 1.3e-09 37.8 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|15679125|ref|NP_276242.1| - 0.063 12.8 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Fumerase_C PF05683.12 gi|15679126|ref|NP_276243.1| - 1.4e-13 50.7 0.0 4.7e-13 48.9 0.0 1.7 1 1 0 1 1 1 1 Fumarase C-terminus Pyridoxal_deC PF00282.19 gi|15679127|ref|NP_276244.1| - 4.7e-37 127.6 0.0 1.4e-36 126.0 0.0 1.6 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|15679127|ref|NP_276244.1| - 7.6e-15 54.7 0.0 2.5e-12 46.4 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|15679127|ref|NP_276244.1| - 4.5e-07 29.5 0.1 7.8e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|15679127|ref|NP_276244.1| - 5.4e-07 29.1 0.0 1.6e-06 27.6 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|15679127|ref|NP_276244.1| - 6e-07 29.0 0.0 1e-06 28.3 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|15679127|ref|NP_276244.1| - 0.00011 21.0 0.0 0.0002 20.2 0.0 1.3 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS PEP-utilizers_C PF02896.18 gi|15679128|ref|NP_276245.1| - 9.7e-07 28.2 0.0 1e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|15679129|ref|NP_276246.1| - 2.5e-117 391.8 0.0 3.7e-117 391.3 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|15679129|ref|NP_276246.1| - 3e-53 180.9 0.5 6e-53 179.9 0.2 1.5 2 0 0 2 2 2 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|15679129|ref|NP_276246.1| - 9.1e-28 95.8 2.1 2.3e-27 94.5 2.1 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Epimerase_2 PF02350.19 gi|15679129|ref|NP_276246.1| - 0.013 14.4 1.1 0.12 11.2 0.1 2.7 4 0 0 4 4 4 0 UDP-N-acetylglucosamine 2-epimerase Ribosomal_L16 PF00252.18 gi|15679130|ref|NP_276247.1| - 2e-35 121.6 1.9 2.5e-35 121.4 1.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e CbiA PF01656.23 gi|15679131|ref|NP_276248.1| - 2e-24 86.1 0.0 2.5e-24 85.8 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15679131|ref|NP_276248.1| - 5.4e-09 36.2 0.1 1.2e-07 31.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|15679131|ref|NP_276248.1| - 2.5e-08 33.7 1.8 0.00071 19.1 0.3 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|15679131|ref|NP_276248.1| - 6e-08 32.5 0.5 0.0041 16.6 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|15679131|ref|NP_276248.1| - 2.3e-07 30.3 1.4 1.7e-06 27.4 0.1 2.0 2 0 0 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|15679131|ref|NP_276248.1| - 1.2e-05 25.0 0.0 0.11 12.0 0.0 2.3 2 1 0 2 2 2 2 Cellulose biosynthesis protein BcsQ AAA_24 PF13479.6 gi|15679131|ref|NP_276248.1| - 0.0029 17.3 0.0 0.022 14.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_26 PF13500.6 gi|15679131|ref|NP_276248.1| - 0.018 14.9 1.0 0.041 13.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|15679131|ref|NP_276248.1| - 0.02 15.5 0.0 0.035 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|15679131|ref|NP_276248.1| - 0.03 14.2 0.2 0.064 13.2 0.2 1.5 1 0 0 1 1 1 0 NTPase GTP_EFTU PF00009.27 gi|15679131|ref|NP_276248.1| - 0.067 12.7 0.7 2.1 7.9 0.1 2.2 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain NB-ARC PF00931.22 gi|15679131|ref|NP_276248.1| - 0.083 12.1 0.4 0.16 11.1 0.4 1.4 1 0 0 1 1 1 0 NB-ARC domain PRK PF00485.18 gi|15679131|ref|NP_276248.1| - 0.099 12.4 0.2 0.19 11.5 0.2 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|15679131|ref|NP_276248.1| - 0.13 12.6 0.0 0.25 11.7 0.0 1.6 1 1 1 2 2 2 0 AAA ATPase domain SRP54 PF00448.22 gi|15679131|ref|NP_276248.1| - 0.14 11.8 0.1 0.25 10.9 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ATP-synt_ab PF00006.25 gi|15679131|ref|NP_276248.1| - 0.28 10.8 1.0 0.89 9.2 1.0 1.8 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Pcc1 PF09341.10 gi|15679132|ref|NP_276249.1| - 0.0035 17.4 0.1 0.0048 17.0 0.1 1.4 1 1 0 1 1 1 1 Transcription factor Pcc1 tRNA_bind_4 PF18490.1 gi|15679133|ref|NP_276250.1| - 1e-56 191.2 0.0 1.7e-56 190.5 0.0 1.4 1 0 0 1 1 1 1 tRNA-binding domain tRNA-synt_2b PF00587.25 gi|15679133|ref|NP_276250.1| - 4.3e-10 39.8 0.0 8.5e-10 38.9 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) zf-C2HC5 PF06221.13 gi|15679134|ref|NP_276251.1| - 7e-05 22.7 4.5 0.00012 22.0 4.5 1.3 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type zf-B_box PF00643.24 gi|15679134|ref|NP_276251.1| - 0.012 15.7 2.2 0.012 15.7 2.2 2.1 1 1 1 2 2 2 0 B-box zinc finger Prok-RING_2 PF14445.6 gi|15679134|ref|NP_276251.1| - 0.053 13.7 4.0 0.11 12.7 4.0 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 DUF4577 PF15145.6 gi|15679134|ref|NP_276251.1| - 0.064 13.3 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Orf78 PF06024.12 gi|15679134|ref|NP_276251.1| - 0.085 13.2 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Orf78 (ac78) ArfA PF03889.13 gi|15679134|ref|NP_276251.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Alternative ribosome-rescue factor A ATG27 PF09451.10 gi|15679134|ref|NP_276251.1| - 0.15 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 Laminin_EGF PF00053.24 gi|15679134|ref|NP_276251.1| - 0.17 12.0 6.3 0.25 11.5 6.3 1.2 1 0 0 1 1 1 0 Laminin EGF domain DUF2180 PF09947.9 gi|15679134|ref|NP_276251.1| - 0.23 11.4 7.4 0.61 10.1 7.4 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2180) FYVE PF01363.21 gi|15679134|ref|NP_276251.1| - 0.27 11.4 7.4 4.4 7.5 7.3 2.1 1 1 0 1 1 1 0 FYVE zinc finger zf-RING_5 PF14634.6 gi|15679134|ref|NP_276251.1| - 1.3 9.0 7.5 3.4 7.7 7.5 1.7 1 1 1 2 2 2 0 zinc-RING finger domain Gin PF10764.9 gi|15679134|ref|NP_276251.1| - 1.8 8.6 8.8 3.3 7.7 5.2 2.3 1 1 1 2 2 2 0 Inhibitor of sigma-G Gin HisKA_2 PF07568.12 gi|15679135|ref|NP_276252.1| - 8.8e-23 80.2 1.8 8.8e-23 80.2 1.8 1.7 2 0 0 2 2 2 1 Histidine kinase HWE_HK PF07536.14 gi|15679135|ref|NP_276252.1| - 5.2e-08 33.5 0.2 9.6e-08 32.6 0.2 1.4 1 0 0 1 1 1 1 HWE histidine kinase PAS_8 PF13188.7 gi|15679135|ref|NP_276252.1| - 6.2e-07 29.3 0.0 1.6e-06 28.0 0.0 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|15679135|ref|NP_276252.1| - 0.00011 22.1 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.26 gi|15679135|ref|NP_276252.1| - 0.0006 20.3 0.0 0.0013 19.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|15679135|ref|NP_276252.1| - 0.0022 18.0 0.0 0.006 16.6 0.0 1.8 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 gi|15679135|ref|NP_276252.1| - 0.011 15.8 0.0 0.028 14.6 0.0 1.6 1 0 0 1 1 1 0 PAS fold Sec8_exocyst PF04048.14 gi|15679135|ref|NP_276252.1| - 0.11 12.3 0.6 0.19 11.6 0.6 1.3 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain FKBP26_C PF18046.1 gi|15679136|ref|NP_276253.1| - 8.9e-26 89.8 2.0 1.8e-25 88.8 2.0 1.6 1 0 0 1 1 1 1 FKBP26_C-terminal FKBP_C PF00254.28 gi|15679136|ref|NP_276253.1| - 3.1e-16 59.4 0.0 1.4e-15 57.4 0.0 2.1 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase HIGH_NTase1_ass PF16581.5 gi|15679137|ref|NP_276254.1| - 3.3e-89 298.3 0.0 4.2e-89 297.9 0.0 1.1 1 0 0 1 1 1 1 Cytidyltransferase-related C-terminal region HIGH_NTase1 PF05636.11 gi|15679137|ref|NP_276254.1| - 4.4e-17 62.4 0.0 4.7e-11 42.5 0.1 2.2 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase CTP_transf_like PF01467.26 gi|15679137|ref|NP_276254.1| - 0.013 15.7 0.0 0.052 13.7 0.0 2.1 2 1 0 2 2 2 0 Cytidylyltransferase-like AAA_lid_2 PF17863.1 gi|15679137|ref|NP_276254.1| - 1.4 8.8 3.8 1.8 8.5 0.0 2.8 4 0 0 4 4 4 0 AAA lid domain Amidohydro_1 PF01979.20 gi|15679138|ref|NP_276255.1| - 5.1e-24 85.2 0.0 3.1e-22 79.4 0.0 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15679138|ref|NP_276255.1| - 2.5e-16 60.2 0.2 6.4e-09 35.8 0.0 2.4 3 0 0 3 3 3 2 Amidohydrolase family CooT PF10133.9 gi|15679139|ref|NP_276256.1| - 1.5e-19 70.0 0.1 1.7e-19 69.8 0.1 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT MCR_alpha_N PF02745.15 gi|15679140|ref|NP_276257.1| - 1.5e-149 496.7 0.1 1.9e-149 496.4 0.1 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|15679140|ref|NP_276257.1| - 2.9e-71 237.9 3.5 7.1e-71 236.6 3.1 1.9 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_beta_N PF02783.15 gi|15679140|ref|NP_276257.1| - 0.015 14.9 0.0 0.028 14.0 0.0 1.4 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain MCR_gamma PF02240.16 gi|15679141|ref|NP_276258.1| - 3.7e-136 452.2 2.0 4.2e-136 452.0 2.0 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_D PF02505.14 gi|15679142|ref|NP_276259.1| - 2.6e-56 189.4 0.3 2.9e-56 189.3 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D PspB PF06667.12 gi|15679142|ref|NP_276259.1| - 0.066 13.3 1.3 4.9 7.3 0.2 2.4 2 0 0 2 2 2 0 Phage shock protein B MCR_beta PF02241.18 gi|15679143|ref|NP_276260.1| - 8.1e-142 471.1 6.2 1.1e-141 470.7 6.2 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|15679143|ref|NP_276260.1| - 3.2e-82 274.6 0.9 5.1e-82 273.9 0.9 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain Fer4 PF00037.27 gi|15679144|ref|NP_276261.1| - 1.1e-65 215.0 131.9 2.6e-07 30.2 1.2 12.6 13 0 0 13 13 13 12 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679144|ref|NP_276261.1| - 5.7e-52 174.1 92.5 5.2e-11 43.0 11.6 8.1 6 1 2 8 8 8 8 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679144|ref|NP_276261.1| - 1.3e-40 137.3 100.9 6.5e-09 35.8 9.1 8.3 4 2 6 10 10 10 10 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679144|ref|NP_276261.1| - 4.3e-40 134.2 130.3 8.9e-07 28.7 4.3 12.2 12 0 0 12 12 12 12 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679144|ref|NP_276261.1| - 1.3e-38 131.8 94.1 0.0013 19.6 0.5 12.2 8 3 3 12 12 12 12 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15679144|ref|NP_276261.1| - 8.8e-38 128.2 105.8 5.1e-09 36.1 13.5 8.5 3 3 6 9 9 9 9 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679144|ref|NP_276261.1| - 5.7e-36 120.4 114.6 1.1e-05 25.3 4.4 12.2 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679144|ref|NP_276261.1| - 2.8e-33 113.8 100.8 1.9e-10 40.7 9.3 8.2 5 2 2 8 8 8 8 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679144|ref|NP_276261.1| - 1e-23 83.5 89.4 8.7e-06 26.1 7.5 9.7 6 2 2 8 8 8 6 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679144|ref|NP_276261.1| - 4.8e-21 74.1 143.9 0.02 15.8 4.9 12.2 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15679144|ref|NP_276261.1| - 1.1e-20 72.3 117.3 0.0044 17.4 1.1 12.2 11 1 1 12 12 12 11 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679144|ref|NP_276261.1| - 1.2e-16 61.0 99.9 0.00024 21.6 9.3 10.6 5 5 3 8 8 8 8 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|15679144|ref|NP_276261.1| - 3.2e-05 24.0 59.4 0.0013 18.8 9.6 6.1 3 1 1 5 5 5 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679144|ref|NP_276261.1| - 0.0027 18.4 10.8 0.011 16.4 1.9 12.7 11 3 1 12 12 12 4 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15679144|ref|NP_276261.1| - 0.0034 17.9 15.2 0.014 15.9 4.4 12.1 11 2 0 11 11 11 4 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|15679144|ref|NP_276261.1| - 0.018 15.2 105.0 0.24 11.6 3.3 9.7 2 2 8 10 10 10 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679144|ref|NP_276261.1| - 0.89 10.4 95.8 0.27 12.1 1.1 11.4 7 3 5 13 13 13 0 4Fe-4S dicluster domain NiFeSe_Hases PF00374.19 gi|15679145|ref|NP_276262.1| - 1.5e-36 126.4 0.0 6.7e-18 64.9 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 gi|15679145|ref|NP_276262.1| - 0.021 14.0 0.0 0.98 8.5 0.0 2.2 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Oxidored_q6 PF01058.22 gi|15679146|ref|NP_276263.1| - 1.7e-30 105.6 0.0 2.9e-30 104.8 0.0 1.4 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit FlpD PF02662.16 gi|15679147|ref|NP_276264.1| - 1.8e-54 183.0 0.1 2e-54 182.8 0.1 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit Fibrillarin_2 PF10113.9 gi|15679148|ref|NP_276265.1| - 1.5e-263 874.9 0.0 1.6e-263 874.8 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin-like archaeal protein FlpD PF02662.16 gi|15679149|ref|NP_276266.1| - 2.7e-56 188.9 0.0 3e-56 188.7 0.0 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit FrhB_FdhB_C PF04432.13 gi|15679150|ref|NP_276267.1| - 6.9e-40 136.4 0.0 6.9e-40 136.4 0.0 2.1 1 1 1 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|15679150|ref|NP_276267.1| - 4.9e-21 74.7 0.0 1.4e-20 73.2 0.0 1.7 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.6 gi|15679150|ref|NP_276267.1| - 3.8e-06 27.2 12.9 8.5e-06 26.1 11.5 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679150|ref|NP_276267.1| - 1.3e-05 25.7 23.4 2.2e-05 24.9 13.7 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15679150|ref|NP_276267.1| - 0.0004 20.1 4.7 0.0004 20.1 4.7 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679150|ref|NP_276267.1| - 0.00043 20.4 18.9 0.00043 20.4 14.9 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679150|ref|NP_276267.1| - 0.00051 20.4 2.2 0.00051 20.4 2.2 3.9 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679150|ref|NP_276267.1| - 0.00092 19.3 1.4 0.00092 19.3 1.4 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679150|ref|NP_276267.1| - 0.0029 18.2 18.6 0.014 16.0 2.9 3.1 1 1 3 4 4 4 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679150|ref|NP_276267.1| - 0.016 15.2 5.0 0.016 15.2 5.0 3.7 3 1 0 3 3 2 0 4Fe-4S binding domain Esterase_phd PF10503.9 gi|15679150|ref|NP_276267.1| - 0.019 14.4 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Esterase PHB depolymerase Fer4_3 PF12798.7 gi|15679150|ref|NP_276267.1| - 0.026 15.4 3.8 0.026 15.4 3.8 3.9 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679150|ref|NP_276267.1| - 0.032 14.3 3.1 0.032 14.3 3.1 3.6 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15679150|ref|NP_276267.1| - 0.053 14.4 18.5 0.16 12.8 5.8 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679150|ref|NP_276267.1| - 0.058 13.5 13.9 0.17 12.0 0.5 3.4 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679150|ref|NP_276267.1| - 0.16 12.5 18.5 0.26 11.9 4.6 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|15679150|ref|NP_276267.1| - 0.18 12.0 0.2 0.18 12.0 0.2 3.5 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679150|ref|NP_276267.1| - 0.19 12.7 20.2 0.56 11.2 3.7 3.5 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Molybdop_Fe4S4 PF04879.16 gi|15679151|ref|NP_276268.1| - 8.2e-12 44.9 2.8 1.7e-11 43.9 2.8 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 gi|15679151|ref|NP_276268.1| - 0.0034 16.4 0.0 0.94 8.4 0.0 2.2 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Glyco_hydro_36 PF17167.4 gi|15679151|ref|NP_276268.1| - 0.18 10.4 0.0 0.27 9.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase 36 superfamily, catalytic domain HMD PF03201.16 gi|15679153|ref|NP_276270.1| - 8.5e-41 138.1 0.1 2.2e-40 136.8 0.1 1.7 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.15 gi|15679153|ref|NP_276270.1| - 0.1 12.8 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Glyco_hydro_4 PF02056.16 gi|15679153|ref|NP_276270.1| - 0.12 12.0 0.0 0.27 10.8 0.0 1.6 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase Radical_SAM PF04055.21 gi|15679154|ref|NP_276271.1| - 1.8e-12 47.9 0.2 4.4e-12 46.7 0.2 1.7 2 0 0 2 2 2 1 Radical SAM superfamily BATS PF06968.13 gi|15679154|ref|NP_276271.1| - 1.5e-07 31.5 0.0 3.8e-07 30.1 0.0 1.8 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain DUF3236 PF11576.8 gi|15679155|ref|NP_276272.1| - 1.2e-71 239.4 0.0 1.3e-71 239.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3236) MCM_lid PF17855.1 gi|15679155|ref|NP_276272.1| - 0.07 13.6 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 MCM AAA-lid domain DUF5100 PF17029.5 gi|15679155|ref|NP_276272.1| - 0.13 12.1 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5100) DUF1188 PF06690.11 gi|15679156|ref|NP_276273.1| - 1.7e-96 322.6 0.0 1.9e-96 322.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1188) NIF3 PF01784.18 gi|15679157|ref|NP_276274.1| - 3.4e-26 92.4 0.0 7e-21 75.0 0.0 2.0 1 1 1 2 2 2 2 NIF3 (NGG1p interacting factor 3) ThiF PF00899.21 gi|15679158|ref|NP_276275.1| - 0.0044 16.4 0.1 0.006 16.0 0.1 1.3 1 0 0 1 1 1 1 ThiF family Biotin_lipoyl_2 PF13533.6 gi|15679158|ref|NP_276275.1| - 0.011 15.5 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Biotin-lipoyl like UPF0254 PF06787.11 gi|15679159|ref|NP_276276.1| - 3.3e-65 218.8 0.0 3.7e-65 218.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0254) CinA PF02464.17 gi|15679159|ref|NP_276276.1| - 0.0049 16.4 0.1 0.09 12.3 0.0 2.2 2 0 0 2 2 2 1 Competence-damaged protein ABC_tran PF00005.27 gi|15679160|ref|NP_276277.1| - 1.1e-21 77.8 0.0 1.4e-21 77.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679160|ref|NP_276277.1| - 2.9e-08 33.9 0.7 0.00045 20.1 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15679160|ref|NP_276277.1| - 6.5e-05 22.5 0.4 0.0021 17.5 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15679160|ref|NP_276277.1| - 0.00023 20.8 0.0 0.0004 20.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15679160|ref|NP_276277.1| - 0.0053 17.3 0.2 0.012 16.2 0.1 1.6 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|15679160|ref|NP_276277.1| - 0.0061 16.5 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|15679160|ref|NP_276277.1| - 0.0069 16.1 0.1 0.039 13.7 0.0 1.8 1 1 0 2 2 2 1 AAA ATPase domain AAA_27 PF13514.6 gi|15679160|ref|NP_276277.1| - 0.053 13.1 0.0 0.08 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|15679160|ref|NP_276277.1| - 0.063 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|15679160|ref|NP_276277.1| - 0.17 11.6 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein UPF0051 PF01458.17 gi|15679161|ref|NP_276278.1| - 1.5e-55 188.3 0.4 2.1e-55 187.7 0.4 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) TIP39 PF14980.6 gi|15679161|ref|NP_276278.1| - 0.018 14.9 0.1 8.3 6.4 0.0 2.7 3 0 0 3 3 3 0 TIP39 peptide PRC PF05239.16 gi|15679162|ref|NP_276279.1| - 8.4e-11 41.8 3.6 1.3e-10 41.2 3.6 1.3 1 1 0 1 1 1 1 PRC-barrel domain NTP_transf_3 PF12804.7 gi|15679163|ref|NP_276280.1| - 2.4e-19 70.2 0.0 2.7e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|15679163|ref|NP_276280.1| - 1.1e-10 41.7 0.0 1.5e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.23 gi|15679163|ref|NP_276280.1| - 3.1e-08 33.5 0.0 3.6e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase CTP_transf_3 PF02348.19 gi|15679163|ref|NP_276280.1| - 0.0001 22.3 0.0 0.00019 21.4 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase DUF4029 PF13221.6 gi|15679163|ref|NP_276280.1| - 0.093 13.4 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4029) DUF2114 PF09887.9 gi|15679164|ref|NP_276281.1| - 2.9e-224 744.6 0.1 3.3e-224 744.4 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) Usp PF00582.26 gi|15679165|ref|NP_276282.1| - 3.9e-30 105.2 0.2 4.4e-30 105.0 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|15679165|ref|NP_276282.1| - 0.16 11.9 0.0 0.3 11.1 0.0 1.4 1 1 0 1 1 1 0 DNA photolyase Na_Ca_ex PF01699.24 gi|15679166|ref|NP_276283.1| - 3.8e-55 186.0 39.0 1.2e-28 99.9 12.5 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF3488 PF11992.8 gi|15679166|ref|NP_276283.1| - 0.017 14.1 1.0 0.017 14.1 1.0 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF3488) 7tm_1 PF00001.21 gi|15679166|ref|NP_276283.1| - 0.092 12.1 0.2 0.14 11.5 0.2 1.2 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) MtrH PF02007.18 gi|15679167|ref|NP_276284.1| - 7e-158 524.4 1.7 7.9e-158 524.3 1.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.13 gi|15679168|ref|NP_276285.1| - 8.4e-31 105.6 1.0 1.1e-30 105.2 1.0 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G MtrF PF09472.10 gi|15679169|ref|NP_276286.1| - 1.4e-27 94.8 1.9 1.6e-27 94.7 1.9 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) SpecificRecomb PF10136.9 gi|15679169|ref|NP_276286.1| - 0.03 12.7 0.2 0.031 12.6 0.2 1.0 1 0 0 1 1 1 0 Site-specific recombinase MtrA PF04208.14 gi|15679170|ref|NP_276287.1| - 3.8e-88 293.6 3.3 5.4e-88 293.1 3.3 1.2 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|15679170|ref|NP_276287.1| - 3.3e-05 23.2 0.6 6e-05 22.3 0.6 1.4 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.12 gi|15679171|ref|NP_276288.1| - 6.4e-39 132.3 0.1 7e-39 132.1 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.13 gi|15679172|ref|NP_276289.1| - 7.3e-108 359.7 27.8 8.3e-108 359.5 27.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C DUF1294 PF06961.13 gi|15679172|ref|NP_276289.1| - 0.25 11.6 4.1 1.8 8.9 0.5 3.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1294) Caveolin PF01146.17 gi|15679172|ref|NP_276289.1| - 0.5 10.3 2.5 8.5 6.3 0.0 2.5 2 1 0 2 2 2 0 Caveolin MtrD PF04207.12 gi|15679173|ref|NP_276290.1| - 1.9e-98 328.5 34.5 2.2e-98 328.3 34.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.12 gi|15679174|ref|NP_276291.1| - 1.8e-135 450.5 14.6 2.1e-135 450.3 14.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E T4BSS_DotI_IcmL PF11393.8 gi|15679174|ref|NP_276291.1| - 0.094 12.2 0.6 0.14 11.6 0.6 1.2 1 0 0 1 1 1 0 Type-IV b secretion system, inner-membrane complex component DUF4191 PF13829.6 gi|15679174|ref|NP_276291.1| - 1.7 7.9 4.5 5.7 6.2 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) RseC_MucC PF04246.12 gi|15679174|ref|NP_276291.1| - 3.5 7.6 7.1 0.69 9.9 0.3 2.8 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC MCR_alpha_N PF02745.15 gi|15679175|ref|NP_276292.1| - 5.4e-150 498.2 0.5 7.1e-150 497.8 0.5 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|15679175|ref|NP_276292.1| - 5.8e-68 227.2 3.6 1.3e-67 226.1 3.6 1.6 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.16 gi|15679176|ref|NP_276293.1| - 1.4e-135 450.3 1.4 1.5e-135 450.1 1.4 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.12 gi|15679177|ref|NP_276294.1| - 0.00013 21.2 0.2 0.00027 20.1 0.2 1.4 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.14 gi|15679178|ref|NP_276295.1| - 5.5e-51 172.2 0.4 9.1e-51 171.5 0.4 1.3 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.18 gi|15679179|ref|NP_276296.1| - 2.6e-142 472.7 6.3 3.8e-142 472.2 6.3 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|15679179|ref|NP_276296.1| - 4.1e-86 287.3 1.6 6.6e-86 286.6 1.6 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain Radical_SAM PF04055.21 gi|15679181|ref|NP_276298.1| - 1.1e-15 58.4 0.1 5.8e-15 56.1 0.1 2.1 1 1 1 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|15679182|ref|NP_276299.1| - 3.9e-30 105.4 0.0 1e-29 104.1 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|15679182|ref|NP_276299.1| - 6e-09 36.0 0.3 2.7e-07 30.6 0.3 2.9 2 1 0 2 2 2 1 B12 binding domain Cation_efflux PF01545.21 gi|15679183|ref|NP_276300.1| - 1.1e-44 152.6 19.3 1.3e-44 152.3 19.3 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|15679183|ref|NP_276300.1| - 1.7e-16 60.1 0.4 3.4e-16 59.2 0.4 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Nitro_FeMo-Co PF02579.17 gi|15679183|ref|NP_276300.1| - 9.3e-10 38.7 0.0 1.7e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor CbiA PF01656.23 gi|15679184|ref|NP_276301.1| - 8.2e-28 97.0 0.0 1.1e-27 96.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|15679184|ref|NP_276301.1| - 1.1e-13 51.2 0.1 9.7e-07 28.5 0.0 2.7 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|15679184|ref|NP_276301.1| - 3.4e-08 33.0 9.4 1.4e-05 24.7 4.6 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain ArsA_ATPase PF02374.15 gi|15679184|ref|NP_276301.1| - 2.1e-07 30.5 0.3 0.0037 16.5 0.3 2.1 2 0 0 2 2 2 2 Anion-transporting ATPase Fer4_7 PF12838.7 gi|15679184|ref|NP_276301.1| - 9.6e-06 26.1 19.1 0.00019 21.9 8.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679184|ref|NP_276301.1| - 9.7e-06 25.7 7.4 2.2e-05 24.5 7.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679184|ref|NP_276301.1| - 3.8e-05 23.7 4.7 3.8e-05 23.7 4.7 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679184|ref|NP_276301.1| - 8e-05 22.5 9.3 0.0025 17.8 3.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679184|ref|NP_276301.1| - 9e-05 23.3 7.7 0.0067 17.3 1.2 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain RsgA_GTPase PF03193.16 gi|15679184|ref|NP_276301.1| - 0.00027 20.9 0.1 0.63 9.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Fer4_10 PF13237.6 gi|15679184|ref|NP_276301.1| - 0.00033 20.7 6.9 0.00078 19.5 6.9 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_29 PF13555.6 gi|15679184|ref|NP_276301.1| - 0.0005 19.8 1.1 0.011 15.5 0.1 2.6 3 0 0 3 3 2 1 P-loop containing region of AAA domain Fer4_NifH PF00142.18 gi|15679184|ref|NP_276301.1| - 0.0025 17.3 0.3 0.077 12.4 0.2 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 gi|15679184|ref|NP_276301.1| - 0.0043 17.0 0.0 0.069 13.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15679184|ref|NP_276301.1| - 0.0068 16.8 0.1 0.018 15.5 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain Fer4_2 PF12797.7 gi|15679184|ref|NP_276301.1| - 0.0092 16.0 6.9 0.013 15.5 1.8 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679184|ref|NP_276301.1| - 0.013 16.0 2.5 0.63 10.5 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain CBP_BcsQ PF06564.12 gi|15679184|ref|NP_276301.1| - 0.016 14.7 0.0 2.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ AAA_26 PF13500.6 gi|15679184|ref|NP_276301.1| - 0.023 14.5 0.3 0.041 13.7 0.0 1.5 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 gi|15679184|ref|NP_276301.1| - 0.026 14.1 0.0 0.045 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Fer4_4 PF12800.7 gi|15679184|ref|NP_276301.1| - 0.027 14.9 1.0 0.027 14.9 1.0 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15679184|ref|NP_276301.1| - 0.041 14.8 11.3 0.93 10.6 4.0 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain GTP_EFTU PF00009.27 gi|15679184|ref|NP_276301.1| - 0.065 12.8 0.1 0.15 11.6 0.0 1.5 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 gi|15679184|ref|NP_276301.1| - 0.075 13.5 0.0 0.19 12.2 0.0 1.8 2 1 0 2 2 2 0 ABC transporter CbiA PF01656.23 gi|15679185|ref|NP_276302.1| - 1.1e-25 90.1 0.0 1.5e-25 89.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.27 gi|15679185|ref|NP_276302.1| - 4.7e-11 42.0 7.7 4.5e-05 23.1 1.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain ParA PF10609.9 gi|15679185|ref|NP_276302.1| - 3.8e-10 39.6 0.1 2e-08 34.0 0.0 2.4 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|15679185|ref|NP_276302.1| - 1.8e-09 37.8 0.3 2.8e-05 24.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|15679185|ref|NP_276302.1| - 1e-06 28.2 1.0 7.5e-06 25.3 0.3 2.4 3 0 0 3 3 3 1 Anion-transporting ATPase AAA_25 PF13481.6 gi|15679185|ref|NP_276302.1| - 3.8e-06 26.6 0.9 0.0019 17.8 0.2 2.2 2 0 0 2 2 2 2 AAA domain Fer4_9 PF13187.6 gi|15679185|ref|NP_276302.1| - 4.8e-06 26.6 10.0 0.00066 19.8 12.6 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679185|ref|NP_276302.1| - 5.6e-06 26.1 10.9 0.0049 16.9 2.2 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain MipZ PF09140.11 gi|15679185|ref|NP_276302.1| - 7.3e-06 25.5 0.1 0.00082 18.7 0.0 2.1 2 0 0 2 2 2 1 ATPase MipZ Fer4_21 PF14697.6 gi|15679185|ref|NP_276302.1| - 1.1e-05 25.4 6.9 1.1e-05 25.4 6.9 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679185|ref|NP_276302.1| - 2.9e-05 24.1 5.4 0.066 13.3 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679185|ref|NP_276302.1| - 3.4e-05 24.2 3.9 0.033 14.6 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679185|ref|NP_276302.1| - 0.0001 22.8 11.1 0.0065 17.0 13.2 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain CBP_BcsQ PF06564.12 gi|15679185|ref|NP_276302.1| - 0.00011 21.8 0.0 0.0021 17.6 0.0 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_6 PF12837.7 gi|15679185|ref|NP_276302.1| - 0.00011 22.1 11.6 0.015 15.3 1.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679185|ref|NP_276302.1| - 0.00013 22.4 3.7 0.31 11.6 1.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679185|ref|NP_276302.1| - 0.00014 22.8 7.2 0.2 12.6 1.9 2.6 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|15679185|ref|NP_276302.1| - 0.00083 20.1 16.3 0.039 14.9 4.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679185|ref|NP_276302.1| - 0.0015 19.3 2.2 0.26 12.0 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_NifH PF00142.18 gi|15679185|ref|NP_276302.1| - 0.0032 16.9 0.3 0.018 14.5 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|15679185|ref|NP_276302.1| - 0.004 16.9 0.1 2.9 7.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain Helicase_RecD PF05127.14 gi|15679185|ref|NP_276302.1| - 0.056 13.3 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 Helicase SRP54 PF00448.22 gi|15679185|ref|NP_276302.1| - 0.066 12.8 1.1 5.8 6.5 0.1 2.4 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_26 PF13500.6 gi|15679185|ref|NP_276302.1| - 0.11 12.2 1.7 0.84 9.4 0.1 2.9 3 1 0 3 3 3 0 AAA domain PhoH PF02562.16 gi|15679185|ref|NP_276302.1| - 0.19 11.2 0.1 0.4 10.1 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein Fer4_22 PF17179.4 gi|15679185|ref|NP_276302.1| - 0.52 11.2 11.4 0.87 10.5 0.7 2.4 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679185|ref|NP_276302.1| - 2.5 8.7 7.3 5.1 7.7 0.2 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Nitro_FeMo-Co PF02579.17 gi|15679186|ref|NP_276303.1| - 1e-24 86.7 0.0 1.2e-24 86.4 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor ParA PF10609.9 gi|15679187|ref|NP_276304.1| - 1.6e-89 299.6 0.1 1.9e-89 299.3 0.1 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|15679187|ref|NP_276304.1| - 1.1e-13 51.4 0.0 2.6e-13 50.2 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15679187|ref|NP_276304.1| - 3.3e-10 40.1 0.1 1.5e-06 28.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|15679187|ref|NP_276304.1| - 2.4e-09 36.8 2.3 5.3e-06 25.8 0.4 3.3 2 1 2 4 4 4 2 Anion-transporting ATPase MipZ PF09140.11 gi|15679187|ref|NP_276304.1| - 7.7e-06 25.4 0.0 1.2e-05 24.8 0.0 1.4 1 1 0 1 1 1 1 ATPase MipZ RsgA_GTPase PF03193.16 gi|15679187|ref|NP_276304.1| - 0.00013 21.9 0.1 0.0035 17.3 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Zeta_toxin PF06414.12 gi|15679187|ref|NP_276304.1| - 0.0004 19.7 0.0 0.0043 16.3 0.0 2.3 3 0 0 3 3 3 1 Zeta toxin SRP54 PF00448.22 gi|15679187|ref|NP_276304.1| - 0.00048 19.8 0.1 0.0012 18.5 0.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|15679187|ref|NP_276304.1| - 0.00058 18.9 0.1 0.0011 18.0 0.1 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB APS_kinase PF01583.20 gi|15679187|ref|NP_276304.1| - 0.0014 18.5 0.0 0.0025 17.7 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase CLP1_P PF16575.5 gi|15679187|ref|NP_276304.1| - 0.0017 18.2 0.0 0.0033 17.3 0.0 1.4 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop KTI12 PF08433.10 gi|15679187|ref|NP_276304.1| - 0.004 16.6 0.0 0.0062 16.0 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MobB PF03205.14 gi|15679187|ref|NP_276304.1| - 0.0048 16.8 0.0 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_26 PF13500.6 gi|15679187|ref|NP_276304.1| - 0.0073 16.2 0.2 3.1 7.6 0.1 2.4 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|15679187|ref|NP_276304.1| - 0.0086 15.7 0.0 0.29 10.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|15679187|ref|NP_276304.1| - 0.0097 15.4 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA_30 PF13604.6 gi|15679187|ref|NP_276304.1| - 0.013 15.3 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|15679187|ref|NP_276304.1| - 0.016 14.9 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|15679187|ref|NP_276304.1| - 0.022 14.7 0.1 0.048 13.6 0.1 1.5 1 0 0 1 1 1 0 NTPase AAA_16 PF13191.6 gi|15679187|ref|NP_276304.1| - 0.033 14.6 0.1 0.051 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|15679187|ref|NP_276304.1| - 0.037 14.6 0.0 0.066 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF853 PF05872.12 gi|15679187|ref|NP_276304.1| - 0.039 12.6 0.0 0.054 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Fer4_NifH PF00142.18 gi|15679187|ref|NP_276304.1| - 0.044 13.2 0.2 0.11 11.9 0.1 1.6 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 gi|15679187|ref|NP_276304.1| - 0.048 12.8 0.2 0.078 12.1 0.2 1.3 1 0 0 1 1 1 0 NB-ARC domain Rad17 PF03215.15 gi|15679187|ref|NP_276304.1| - 0.068 13.1 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Thymidylate_kin PF02223.17 gi|15679187|ref|NP_276304.1| - 0.085 12.5 0.0 0.25 11.0 0.0 1.8 1 1 1 2 2 2 0 Thymidylate kinase Hydrolase_4 PF12146.8 gi|15679187|ref|NP_276304.1| - 0.092 12.0 0.0 0.28 10.4 0.0 1.8 2 0 0 2 2 2 0 Serine aminopeptidase, S33 PhoH PF02562.16 gi|15679187|ref|NP_276304.1| - 0.13 11.7 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein A2L_zn_ribbon PF08792.10 gi|15679187|ref|NP_276304.1| - 0.13 12.0 0.2 0.3 10.8 0.2 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain Glyco_trans_4_4 PF13579.6 gi|15679187|ref|NP_276304.1| - 0.15 12.5 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain DUF87 PF01935.17 gi|15679187|ref|NP_276304.1| - 0.16 12.0 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|15679187|ref|NP_276304.1| - 0.18 12.0 0.1 0.22 11.7 0.1 1.4 1 1 0 1 1 1 0 AAA domain Nitro_FeMo-Co PF02579.17 gi|15679188|ref|NP_276305.1| - 6.4e-20 71.3 0.0 7.3e-20 71.1 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF134 PF02001.16 gi|15679189|ref|NP_276306.1| - 7.2e-43 145.1 0.0 1e-42 144.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 HypA PF01155.19 gi|15679189|ref|NP_276306.1| - 5.8e-06 26.3 10.0 0.00015 21.7 0.0 2.2 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sigma70_r4_2 PF08281.12 gi|15679189|ref|NP_276306.1| - 0.00076 19.1 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_10 PF04967.12 gi|15679189|ref|NP_276306.1| - 0.0022 17.8 0.0 0.0035 17.1 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Zn-ribbon_8 PF09723.10 gi|15679189|ref|NP_276306.1| - 0.006 16.7 1.8 0.006 16.7 1.8 2.9 2 1 1 3 3 3 1 Zinc ribbon domain Zn_Tnp_IS91 PF14319.6 gi|15679189|ref|NP_276306.1| - 0.017 15.2 7.8 0.81 9.8 0.1 2.3 2 0 0 2 2 2 0 Transposase zinc-binding domain Sigma70_r4 PF04545.16 gi|15679189|ref|NP_276306.1| - 0.018 14.6 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_37 PF13744.6 gi|15679189|ref|NP_276306.1| - 0.021 14.8 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|15679189|ref|NP_276306.1| - 0.074 13.1 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix A2L_zn_ribbon PF08792.10 gi|15679189|ref|NP_276306.1| - 0.11 12.3 12.1 8.5 6.2 0.7 4.3 4 0 0 4 4 4 0 A2L zinc ribbon domain HTH_1 PF00126.27 gi|15679189|ref|NP_276306.1| - 0.12 12.4 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 gi|15679189|ref|NP_276306.1| - 0.17 11.7 0.0 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain TackOD1 PF18551.1 gi|15679189|ref|NP_276306.1| - 0.4 10.3 8.7 0.51 10.0 0.2 2.3 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 Zn_Tnp_IS1595 PF12760.7 gi|15679189|ref|NP_276306.1| - 0.57 10.2 16.2 2 8.5 1.8 3.6 3 1 0 3 3 3 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 gi|15679189|ref|NP_276306.1| - 0.86 9.5 20.3 1.9 8.4 0.5 4.3 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS) zf-ribbon_3 PF13248.6 gi|15679189|ref|NP_276306.1| - 1.3 8.5 15.1 0.93 9.0 1.8 3.4 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15679189|ref|NP_276306.1| - 3.5 7.5 20.9 1.4 8.8 0.3 4.0 4 1 0 4 4 4 0 zinc-ribbon domain Metallophos PF00149.28 gi|15679190|ref|NP_276307.1| - 4.3e-13 50.2 0.0 6.5e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15679190|ref|NP_276307.1| - 4.3e-08 33.5 0.0 7.2e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF3021 PF11457.8 gi|15679190|ref|NP_276307.1| - 0.64 10.4 7.1 1.1 9.5 7.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) MCR_C PF04609.12 gi|15679191|ref|NP_276308.1| - 2.2e-127 423.8 0.3 2.6e-127 423.5 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF2853 PF11015.8 gi|15679192|ref|NP_276309.1| - 0.029 15.0 0.0 0.14 12.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2853) 2-ph_phosp PF04029.14 gi|15679193|ref|NP_276310.1| - 6e-57 192.4 0.0 7e-57 192.2 0.0 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase AHJR-like PF18743.1 gi|15679193|ref|NP_276310.1| - 0.054 13.0 0.0 0.092 12.3 0.0 1.3 1 0 0 1 1 1 0 REase_AHJR-like TraB PF01963.17 gi|15679194|ref|NP_276311.1| - 6.7e-24 85.2 0.0 9.3e-24 84.7 0.0 1.1 1 0 0 1 1 1 1 TraB family DUF1057 PF06342.12 gi|15679194|ref|NP_276311.1| - 0.11 11.5 0.0 1.3 8.0 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1057) Inhibitor_I9 PF05922.16 gi|15679194|ref|NP_276311.1| - 0.18 12.5 0.1 11 6.8 0.3 2.5 2 1 0 2 2 2 0 Peptidase inhibitor I9 DUF1922 PF09082.10 gi|15679195|ref|NP_276312.1| - 5.8e-36 122.6 2.4 6.4e-36 122.5 2.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) Toxin_35 PF10530.9 gi|15679195|ref|NP_276312.1| - 0.0098 15.9 1.4 0.017 15.1 1.4 1.4 1 0 0 1 1 1 1 Toxin with inhibitor cystine knot ICK or Knottin scaffold PilN PF05137.13 gi|15679195|ref|NP_276312.1| - 0.083 13.0 0.0 0.099 12.8 0.0 1.1 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) GTP_EFTU PF00009.27 gi|15679196|ref|NP_276313.1| - 1.2e-33 116.3 0.0 1.7e-33 115.8 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|15679196|ref|NP_276313.1| - 1.4e-11 44.6 3.0 1.5e-11 44.5 0.5 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 gi|15679196|ref|NP_276313.1| - 6.7e-05 23.2 0.0 0.00016 22.0 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain ATP_bind_1 PF03029.17 gi|15679196|ref|NP_276313.1| - 0.0013 18.6 0.0 0.017 14.9 0.0 2.2 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.23 gi|15679196|ref|NP_276313.1| - 0.0019 18.3 0.0 0.0049 16.9 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 gi|15679196|ref|NP_276313.1| - 0.049 12.6 0.5 4.9 6.1 0.2 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_3 PF01171.20 gi|15679197|ref|NP_276314.1| - 1.7e-12 47.5 0.0 6.6e-12 45.5 0.0 1.8 1 1 0 1 1 1 1 PP-loop family zn-ribbon_14 PF16503.5 gi|15679197|ref|NP_276314.1| - 4.3e-05 22.9 1.1 9.2e-05 21.9 1.1 1.5 1 0 0 1 1 1 1 Zinc-ribbon tRNA_Me_trans PF03054.16 gi|15679197|ref|NP_276314.1| - 0.0013 17.6 0.0 0.0014 17.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase Diphthami_syn_2 PF01902.17 gi|15679197|ref|NP_276314.1| - 0.011 15.2 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 0 Diphthamide synthase RecR PF02132.15 gi|15679197|ref|NP_276314.1| - 1.7 8.3 5.4 0.42 10.2 1.2 2.2 3 0 0 3 3 3 0 RecR protein Thiamine_BP PF01910.17 gi|15679198|ref|NP_276315.1| - 4.5e-33 113.0 0.1 5e-33 112.9 0.1 1.0 1 0 0 1 1 1 1 Thiamine-binding protein DegT_DnrJ_EryC1 PF01041.17 gi|15679199|ref|NP_276316.1| - 7e-146 486.2 0.0 7.8e-146 486.0 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|15679199|ref|NP_276316.1| - 7.1e-09 35.4 0.1 1.7e-08 34.1 0.1 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|15679199|ref|NP_276316.1| - 2.2e-07 30.4 0.0 5.3e-07 29.1 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15679199|ref|NP_276316.1| - 2.3e-07 30.1 0.0 1.4e-06 27.5 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|15679199|ref|NP_276316.1| - 2.7e-06 26.2 0.0 3.6e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CPBP PF02517.16 gi|15679200|ref|NP_276317.1| - 1.1e-12 48.2 6.6 1.1e-12 48.2 6.6 2.5 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease NDUF_B12 PF08122.12 gi|15679200|ref|NP_276317.1| - 0.16 12.0 3.4 0.18 11.9 0.1 2.8 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase B12 subunit family TRM PF02005.16 gi|15679201|ref|NP_276318.1| - 2.9e-146 487.5 0.0 3.2e-146 487.3 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase PrmA PF06325.13 gi|15679201|ref|NP_276318.1| - 8e-05 22.2 0.0 0.00012 21.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.16 gi|15679201|ref|NP_276318.1| - 0.0073 16.1 0.1 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein DUF3368 PF11848.8 gi|15679201|ref|NP_276318.1| - 0.085 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) DUF2188 PF09954.9 gi|15679202|ref|NP_276319.1| - 0.0028 17.7 0.0 0.0052 16.9 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2188) DUF4013 PF13197.6 gi|15679203|ref|NP_276320.1| - 2.7e-38 131.5 24.6 2.7e-38 131.5 24.6 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) PRRSV_2b PF07069.11 gi|15679203|ref|NP_276320.1| - 0.051 14.1 0.4 0.051 14.1 0.4 3.7 4 1 0 4 4 4 0 Porcine reproductive and respiratory syndrome virus 2b Man-6-P_recep PF02157.15 gi|15679203|ref|NP_276320.1| - 0.2 10.7 0.2 0.35 9.9 0.2 1.3 1 0 0 1 1 1 0 Mannose-6-phosphate receptor Adeno_E3_14_5 PF04834.12 gi|15679203|ref|NP_276320.1| - 0.91 10.1 4.5 2.3 8.8 1.1 2.6 2 1 0 2 2 2 0 Early E3 14.5 kDa protein HTH_24 PF13412.6 gi|15679204|ref|NP_276321.1| - 5.9e-16 57.8 0.6 9.9e-16 57.0 0.6 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15679204|ref|NP_276321.1| - 9.4e-15 54.2 0.2 1.8e-14 53.3 0.2 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|15679204|ref|NP_276321.1| - 3.8e-13 49.2 0.0 5.7e-13 48.6 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|15679204|ref|NP_276321.1| - 3.1e-06 27.0 0.1 4.9e-06 26.4 0.1 1.3 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.12 gi|15679204|ref|NP_276321.1| - 4e-05 23.2 0.0 7.2e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_DeoR PF08220.12 gi|15679204|ref|NP_276321.1| - 0.0003 20.5 0.1 0.0006 19.5 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain MarR_2 PF12802.7 gi|15679204|ref|NP_276321.1| - 0.00061 19.6 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|15679204|ref|NP_276321.1| - 0.00062 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_20 PF12840.7 gi|15679204|ref|NP_276321.1| - 0.00066 19.7 0.0 0.00099 19.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15679204|ref|NP_276321.1| - 0.00067 19.5 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|15679204|ref|NP_276321.1| - 0.0013 18.6 0.1 0.0042 16.9 0.1 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|15679204|ref|NP_276321.1| - 0.0029 17.4 0.0 0.0047 16.7 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|15679204|ref|NP_276321.1| - 0.0042 16.8 0.0 0.0082 15.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|15679204|ref|NP_276321.1| - 0.0045 17.5 0.0 0.0096 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain FeoC PF09012.10 gi|15679204|ref|NP_276321.1| - 0.0045 17.0 0.0 0.0082 16.2 0.0 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator RuvB_C PF05491.13 gi|15679204|ref|NP_276321.1| - 0.0051 16.7 0.1 0.011 15.6 0.1 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain MarR PF01047.22 gi|15679204|ref|NP_276321.1| - 0.0063 16.4 0.0 0.013 15.5 0.0 1.4 1 0 0 1 1 1 1 MarR family Sigma70_r4 PF04545.16 gi|15679204|ref|NP_276321.1| - 0.0079 15.7 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|15679204|ref|NP_276321.1| - 0.012 15.8 0.0 0.024 14.8 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_ISL3 PF13542.6 gi|15679204|ref|NP_276321.1| - 0.024 14.0 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 NdhM PF10664.9 gi|15679204|ref|NP_276321.1| - 0.046 14.0 0.1 15 5.9 0.0 2.4 2 1 0 2 2 2 0 Cyanobacterial and plastid NDH-1 subunit M E3_UFM1_ligase PF09743.9 gi|15679204|ref|NP_276321.1| - 0.047 13.3 0.3 0.09 12.4 0.2 1.4 2 0 0 2 2 2 0 E3 UFM1-protein ligase 1 CM_2 PF01817.21 gi|15679204|ref|NP_276321.1| - 0.062 13.7 0.5 0.18 12.2 0.5 1.8 1 0 0 1 1 1 0 Chorismate mutase type II RPA_C PF08784.11 gi|15679204|ref|NP_276321.1| - 0.15 12.8 0.2 2.4 8.9 0.1 2.1 2 0 0 2 2 2 0 Replication protein A C terminal HTH_29 PF13551.6 gi|15679204|ref|NP_276321.1| - 0.15 12.1 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix LexA_DNA_bind PF01726.16 gi|15679204|ref|NP_276321.1| - 0.19 11.5 0.1 1.4 8.8 0.0 2.1 2 0 0 2 2 2 0 LexA DNA binding domain Hist_deacetyl PF00850.19 gi|15679205|ref|NP_276322.1| - 1.1e-75 255.0 0.0 2.1e-75 254.0 0.0 1.4 1 1 0 1 1 1 1 Histone deacetylase domain DUF2100 PF09873.9 gi|15679206|ref|NP_276323.1| - 1.5e-74 250.6 3.0 1.7e-74 250.4 3.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2100) Thump_like PF18096.1 gi|15679206|ref|NP_276323.1| - 0.089 12.7 0.1 0.34 10.9 0.0 1.8 2 0 0 2 2 2 0 THUMP domain-like B5 PF03484.15 gi|15679206|ref|NP_276323.1| - 0.13 12.6 0.2 0.32 11.3 0.2 1.7 1 1 0 1 1 1 0 tRNA synthetase B5 domain GCHY-1 PF02649.14 gi|15679207|ref|NP_276324.1| - 6.7e-82 274.9 1.6 7.6e-82 274.7 1.6 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.18 gi|15679207|ref|NP_276324.1| - 0.0039 17.7 1.0 0.063 13.8 0.0 2.9 3 1 0 3 3 3 1 Dihydroneopterin aldolase DUF3510 PF12022.8 gi|15679207|ref|NP_276324.1| - 0.024 15.0 0.1 2.1 8.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3510) Cpn60_TCP1 PF00118.24 gi|15679207|ref|NP_276324.1| - 0.035 12.7 0.2 0.069 11.8 0.1 1.5 2 0 0 2 2 2 0 TCP-1/cpn60 chaperonin family DUF1677 PF07911.13 gi|15679207|ref|NP_276324.1| - 0.79 10.2 4.2 3.6 8.0 0.1 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF1677) DUF2120 PF09893.9 gi|15679208|ref|NP_276325.1| - 4.6e-53 179.0 0.0 5.2e-53 178.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) Asp_protease PF09668.10 gi|15679208|ref|NP_276325.1| - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Aspartyl protease Radical_SAM PF04055.21 gi|15679209|ref|NP_276326.1| - 5.6e-14 52.9 0.1 1.3e-13 51.7 0.1 1.7 1 0 0 1 1 1 1 Radical SAM superfamily DUF429 PF04250.13 gi|15679210|ref|NP_276327.1| - 4.8e-07 29.8 0.0 1.1e-06 28.6 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF429) Met_10 PF02475.16 gi|15679211|ref|NP_276328.1| - 1.1e-72 244.0 0.0 1.4e-72 243.7 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 gi|15679211|ref|NP_276328.1| - 9.5e-05 22.0 0.0 0.00015 21.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.16 gi|15679211|ref|NP_276328.1| - 0.00085 18.6 0.0 0.001 18.3 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|15679211|ref|NP_276328.1| - 0.0013 18.3 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 gi|15679211|ref|NP_276328.1| - 0.0017 18.3 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15679211|ref|NP_276328.1| - 0.0022 18.7 0.0 0.011 16.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|15679211|ref|NP_276328.1| - 0.018 14.4 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_24 PF13578.6 gi|15679211|ref|NP_276328.1| - 0.094 13.7 0.0 0.3 12.1 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain DUF1297 PF06973.12 gi|15679212|ref|NP_276329.1| - 1.3e-85 285.7 0.0 1.8e-85 285.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|15679212|ref|NP_276329.1| - 2.7e-51 172.7 0.0 4.2e-51 172.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GARS_A PF01071.19 gi|15679212|ref|NP_276329.1| - 0.059 13.1 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Proteasome PF00227.26 gi|15679213|ref|NP_276330.1| - 2.4e-60 203.3 1.1 2.8e-60 203.1 1.1 1.0 1 0 0 1 1 1 1 Proteasome subunit KH_7 PF17214.3 gi|15679214|ref|NP_276331.1| - 1.8e-28 98.3 11.8 2.1e-27 94.9 3.1 3.4 4 0 0 4 4 4 2 KH domain Beta-Casp PF10996.8 gi|15679214|ref|NP_276331.1| - 1.8e-23 82.9 0.0 4.8e-23 81.6 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B_6 PF16661.5 gi|15679214|ref|NP_276331.1| - 1.3e-16 60.6 0.0 1.6e-15 57.1 0.0 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|15679214|ref|NP_276331.1| - 2.3e-15 56.3 0.0 5.1e-15 55.1 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|15679214|ref|NP_276331.1| - 3e-12 46.5 0.5 6.5e-12 45.4 0.5 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15679214|ref|NP_276331.1| - 7.6e-12 45.7 0.6 9e-11 42.1 0.6 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily KH_2 PF07650.17 gi|15679214|ref|NP_276331.1| - 0.00075 19.3 9.4 0.011 15.5 0.6 2.8 1 1 1 2 2 2 2 KH domain Lactamase_B_3 PF13483.6 gi|15679214|ref|NP_276331.1| - 0.0025 17.7 0.3 0.021 14.7 0.3 2.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain AIRS_C PF02769.22 gi|15679215|ref|NP_276332.1| - 5.7e-27 94.8 0.1 2.1e-26 92.9 0.0 1.9 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15679215|ref|NP_276332.1| - 8.3e-15 55.2 3.0 1.6e-14 54.3 3.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Ldh_2 PF02615.14 gi|15679216|ref|NP_276333.1| - 6e-121 403.7 0.3 6.7e-121 403.5 0.3 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase TPP_enzyme_N PF02776.18 gi|15679217|ref|NP_276334.1| - 4.4e-09 36.2 0.3 5.3e-09 35.9 0.3 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HipN PF18253.1 gi|15679217|ref|NP_276334.1| - 0.041 13.6 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain TPP_enzyme_C PF02775.21 gi|15679218|ref|NP_276335.1| - 7.8e-18 64.7 0.2 2.6e-17 63.0 0.2 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA_pol_B_exo1 PF03104.19 gi|15679219|ref|NP_276336.1| - 1.2e-44 152.9 0.0 2.1e-44 152.1 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B PF00136.21 gi|15679219|ref|NP_276336.1| - 1.1e-37 129.8 0.0 1.7e-37 129.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo2 PF10108.9 gi|15679219|ref|NP_276336.1| - 2.8e-12 46.8 0.0 4.5e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 gi|15679219|ref|NP_276336.1| - 9.9e-11 41.9 0.0 2.1e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_2 PF03175.13 gi|15679219|ref|NP_276336.1| - 0.0011 17.9 0.0 0.0021 17.0 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral DNA_pol_A_exo1 PF01612.20 gi|15679219|ref|NP_276336.1| - 0.11 12.3 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 3'-5' exonuclease DUF365 PF04033.12 gi|15679220|ref|NP_276337.1| - 0.041 14.2 0.4 0.057 13.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF365) ASCH PF04266.14 gi|15679220|ref|NP_276337.1| - 0.083 13.5 0.0 0.1 13.2 0.0 1.2 1 0 0 1 1 1 0 ASCH domain DUF3850 PF12961.7 gi|15679220|ref|NP_276337.1| - 0.12 12.4 0.0 0.37 10.9 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3850) Mrr_cat PF04471.12 gi|15679221|ref|NP_276338.1| - 6.3e-30 103.6 0.0 9.5e-30 103.0 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease DUF1802 PF08819.11 gi|15679221|ref|NP_276338.1| - 3.8e-27 95.3 0.1 5e-27 94.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) Mrr_cat_2 PF13156.6 gi|15679221|ref|NP_276338.1| - 1.4e-07 31.5 0.1 2.7e-07 30.6 0.1 1.4 1 0 0 1 1 1 1 Restriction endonuclease AI-2E_transport PF01594.16 gi|15679222|ref|NP_276339.1| - 1.4e-71 241.3 31.1 1.6e-71 241.1 31.1 1.0 1 0 0 1 1 1 1 AI-2E family transporter DHODB_Fe-S_bind PF10418.9 gi|15679223|ref|NP_276340.1| - 1.5e-12 47.1 3.0 3e-12 46.1 3.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|15679223|ref|NP_276340.1| - 8.7e-05 23.1 0.1 0.00026 21.6 0.1 1.8 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain DHO_dh PF01180.21 gi|15679224|ref|NP_276341.1| - 4.2e-71 239.6 0.1 4.8e-71 239.4 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|15679224|ref|NP_276341.1| - 1.9e-16 60.1 0.1 8.7e-13 48.0 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|15679224|ref|NP_276341.1| - 5.9e-08 32.5 0.8 4.5e-06 26.3 0.2 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase His_biosynth PF00977.21 gi|15679224|ref|NP_276341.1| - 6.3e-05 22.5 0.0 0.00019 21.0 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|15679224|ref|NP_276341.1| - 0.0081 15.2 1.1 0.023 13.7 1.1 2.0 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|15679224|ref|NP_276341.1| - 0.024 13.7 1.4 0.037 13.0 1.4 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase Nop PF01798.18 gi|15679225|ref|NP_276342.1| - 7.7e-60 202.2 0.0 1.1e-59 201.7 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Fibrillarin PF01269.17 gi|15679226|ref|NP_276343.1| - 8.1e-92 306.4 0.0 9e-92 306.3 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|15679226|ref|NP_276343.1| - 0.0023 18.6 0.0 0.0037 17.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 gi|15679226|ref|NP_276343.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase DFP PF04127.15 gi|15679227|ref|NP_276344.1| - 2.3e-57 193.8 1.0 1.1e-56 191.7 0.1 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|15679227|ref|NP_276344.1| - 1.9e-31 109.0 1.2 2.9e-31 108.4 0.5 1.7 2 0 0 2 2 2 1 Flavoprotein Indigoidine_A PF04227.12 gi|15679227|ref|NP_276344.1| - 0.057 12.8 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Indigoidine synthase A like protein YjeF_N PF03853.15 gi|15679227|ref|NP_276344.1| - 0.058 13.3 0.1 1.1 9.1 0.0 2.3 2 0 0 2 2 2 0 YjeF-related protein N-terminus NAD_binding_7 PF13241.6 gi|15679227|ref|NP_276344.1| - 0.16 12.5 0.2 2.3 8.7 0.2 2.6 2 2 0 2 2 2 0 Putative NAD(P)-binding KH_5 PF13184.6 gi|15679228|ref|NP_276345.1| - 1.3e-13 50.8 3.6 1.3e-13 50.8 3.6 2.2 2 0 0 2 2 2 1 NusA-like KH domain Ribosomal_S7e PF01251.18 gi|15679228|ref|NP_276345.1| - 1.2e-05 25.1 0.1 9.2e-05 22.3 0.1 2.0 1 1 0 2 2 2 1 Ribosomal protein S7e KH_1 PF00013.29 gi|15679228|ref|NP_276345.1| - 0.0022 17.8 3.8 0.0058 16.4 3.8 1.9 1 1 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|15679228|ref|NP_276345.1| - 0.0043 16.9 3.6 0.0083 16.0 1.8 2.3 2 0 0 2 2 2 1 KH domain KH_2 PF07650.17 gi|15679228|ref|NP_276345.1| - 0.0047 16.7 9.7 0.01 15.6 9.1 2.1 1 1 0 1 1 1 1 KH domain PsbP PF01789.16 gi|15679229|ref|NP_276346.1| - 0.00088 19.4 0.4 0.016 15.3 0.4 2.2 1 1 0 1 1 1 1 PsbP DcrB PF08786.11 gi|15679229|ref|NP_276346.1| - 0.12 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 DcrB GvpG PF05120.12 gi|15679230|ref|NP_276347.1| - 0.0028 17.6 3.8 0.005 16.8 3.8 1.4 1 0 0 1 1 1 1 Gas vesicle protein G DUF2157 PF09925.9 gi|15679230|ref|NP_276347.1| - 0.0091 15.8 0.3 0.14 11.9 0.0 2.1 2 0 0 2 2 2 1 Predicted membrane protein (DUF2157) DUF2206 PF09971.9 gi|15679230|ref|NP_276347.1| - 0.045 12.5 0.0 0.072 11.8 0.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) SLED PF12140.8 gi|15679230|ref|NP_276347.1| - 0.15 12.6 0.1 0.27 11.8 0.1 1.3 1 0 0 1 1 1 0 SLED domain DMAP_binding PF06464.11 gi|15679230|ref|NP_276347.1| - 0.17 12.7 8.9 1.1 10.0 8.9 2.3 1 1 0 1 1 1 0 DMAP1-binding Domain DUF724 PF05266.14 gi|15679230|ref|NP_276347.1| - 0.84 9.4 6.4 1.2 8.9 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Rho_Binding PF08912.11 gi|15679230|ref|NP_276347.1| - 1.5 9.7 8.8 2.1 9.2 3.8 2.2 2 0 0 2 2 2 0 Rho Binding Peptidase_C37 PF05416.12 gi|15679230|ref|NP_276347.1| - 5.5 5.4 7.7 7.9 4.9 7.7 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase PDT PF00800.18 gi|15679231|ref|NP_276348.1| - 7.6e-46 156.2 0.0 9.3e-46 155.9 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|15679231|ref|NP_276348.1| - 1.6e-14 53.3 0.1 4e-14 52.1 0.0 1.7 2 0 0 2 2 2 1 ACT domain 3HCDH_RFF PF18321.1 gi|15679231|ref|NP_276348.1| - 0.091 13.2 0.0 2.4 8.6 0.0 2.3 2 0 0 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Lig_C PF18330.1 gi|15679232|ref|NP_276349.1| - 2.2e-42 144.0 0.1 3.6e-42 143.3 0.1 1.4 1 0 0 1 1 1 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|15679232|ref|NP_276349.1| - 1.6e-17 64.3 0.0 3e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|15679232|ref|NP_276349.1| - 0.0073 16.0 0.0 0.33 10.6 0.0 2.2 1 1 0 1 1 1 1 ATP dependent DNA ligase domain T2SSE_N PF05157.15 gi|15679232|ref|NP_276349.1| - 0.061 13.6 0.3 0.31 11.3 0.2 2.3 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein E, N-terminal domain CBS PF00571.28 gi|15679233|ref|NP_276350.1| - 3.4e-52 174.7 15.1 1.2e-13 51.3 0.2 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|15679234|ref|NP_276351.1| - 1.9e-54 181.9 19.3 3.5e-14 53.0 0.1 4.1 4 0 0 4 4 4 4 CBS domain Prim-Pol PF09250.11 gi|15679234|ref|NP_276351.1| - 0.041 14.2 0.0 0.07 13.5 0.0 1.4 1 0 0 1 1 1 0 Bifunctional DNA primase/polymerase, N-terminal CBS PF00571.28 gi|15679235|ref|NP_276352.1| - 6e-57 189.9 10.2 3.4e-14 53.0 1.4 4.2 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|15679236|ref|NP_276353.1| - 1.3e-41 140.9 7.4 2.1e-14 53.7 0.0 4.3 4 1 0 4 4 4 4 CBS domain Peptidase_S55 PF05580.12 gi|15679236|ref|NP_276353.1| - 0.11 12.4 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 SpoIVB peptidase S55 CBS PF00571.28 gi|15679237|ref|NP_276354.1| - 1.8e-28 98.7 4.1 7.4e-14 51.9 0.3 2.2 2 0 0 2 2 2 2 CBS domain zf-RRN7 PF11781.8 gi|15679237|ref|NP_276354.1| - 0.03 14.0 4.7 0.047 13.4 4.7 1.2 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-HIT PF04438.16 gi|15679237|ref|NP_276354.1| - 0.05 13.5 1.8 4.9 7.1 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger C1_2 PF03107.16 gi|15679237|ref|NP_276354.1| - 0.21 11.9 1.0 0.33 11.3 1.0 1.2 1 0 0 1 1 1 0 C1 domain Radical_SAM PF04055.21 gi|15679238|ref|NP_276355.1| - 1.4e-16 61.3 0.0 1.8e-16 60.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679238|ref|NP_276355.1| - 1.4e-14 54.5 0.0 2.1e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679238|ref|NP_276355.1| - 1.9e-13 50.6 0.0 2.9e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.19 gi|15679239|ref|NP_276356.1| - 1.2e-28 99.5 0.0 1.5e-28 99.3 0.0 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF366 PF04017.12 gi|15679240|ref|NP_276357.1| - 8.4e-66 220.9 0.1 9.6e-66 220.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) DUF296 PF03479.15 gi|15679241|ref|NP_276358.1| - 5.9e-23 81.3 0.1 6.9e-23 81.1 0.1 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain NTP_transf_2 PF01909.23 gi|15679242|ref|NP_276359.1| - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain Homoserine_dh PF00742.19 gi|15679243|ref|NP_276360.1| - 1.5e-60 204.0 0.0 3.1e-60 203.0 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|15679243|ref|NP_276360.1| - 6.3e-22 78.4 0.0 1.1e-21 77.7 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ACT PF01842.25 gi|15679243|ref|NP_276360.1| - 4e-14 52.1 0.1 9.5e-14 50.9 0.1 1.7 1 0 0 1 1 1 1 ACT domain GFO_IDH_MocA PF01408.22 gi|15679243|ref|NP_276360.1| - 0.0058 17.4 0.0 0.013 16.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold ACT_4 PF13291.6 gi|15679243|ref|NP_276360.1| - 0.011 16.3 0.0 0.026 15.1 0.0 1.6 1 0 0 1 1 1 0 ACT domain AP_endonuc_2 PF01261.24 gi|15679243|ref|NP_276360.1| - 0.015 14.7 0.1 0.028 13.9 0.1 1.5 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Sacchrp_dh_NADP PF03435.18 gi|15679243|ref|NP_276360.1| - 0.028 14.7 0.1 0.12 12.6 0.1 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Cas_Cas4 PF01930.17 gi|15679244|ref|NP_276361.1| - 2.2e-08 34.4 0.0 4.5e-07 30.1 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|15679244|ref|NP_276361.1| - 0.00025 21.1 1.9 0.29 11.0 0.1 3.1 2 2 1 3 3 3 2 PD-(D/E)XK nuclease superfamily DUF5612 PF18462.1 gi|15679246|ref|NP_276363.1| - 6e-76 253.1 7.5 8e-76 252.7 7.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5612) ACT PF01842.25 gi|15679246|ref|NP_276363.1| - 6.9e-12 44.9 0.7 1.3e-10 40.9 0.0 2.7 3 0 0 3 3 3 1 ACT domain ACT_4 PF13291.6 gi|15679246|ref|NP_276363.1| - 2e-08 34.7 1.5 5.3e-07 30.1 0.1 2.4 2 0 0 2 2 2 1 ACT domain StbA PF06406.11 gi|15679246|ref|NP_276363.1| - 0.0013 18.1 0.3 0.002 17.5 0.3 1.3 1 0 0 1 1 1 1 StbA protein Transketolase_C PF02780.20 gi|15679246|ref|NP_276363.1| - 0.012 15.5 0.9 0.038 13.9 0.6 1.9 1 1 1 2 2 2 0 Transketolase, C-terminal domain ACT_7 PF13840.6 gi|15679246|ref|NP_276363.1| - 0.096 12.5 1.9 0.54 10.1 0.0 2.9 3 0 0 3 3 3 0 ACT domain Ehbp PF10622.9 gi|15679247|ref|NP_276364.1| - 5.2e-41 138.5 0.4 5.9e-41 138.4 0.4 1.0 1 0 0 1 1 1 1 Energy-converting hydrogenase B subunit P (EhbP) Ig_GlcNase PF18368.1 gi|15679247|ref|NP_276364.1| - 0.01 16.0 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain NADHdh PF00146.21 gi|15679248|ref|NP_276365.1| - 2.1e-21 76.5 29.1 5.2e-14 52.3 16.4 2.0 2 0 0 2 2 2 2 NADH dehydrogenase DUF3927 PF13064.6 gi|15679248|ref|NP_276365.1| - 0.2 11.6 2.7 0.33 11.0 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) Complex1_49kDa PF00346.19 gi|15679249|ref|NP_276366.1| - 7.8e-47 159.6 0.6 1.7e-39 135.6 0.2 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|15679249|ref|NP_276366.1| - 3.9e-19 68.9 0.2 2e-14 53.4 0.0 3.0 3 1 1 4 4 4 2 Nickel-dependent hydrogenase Oxidored_q6 PF01058.22 gi|15679250|ref|NP_276367.1| - 1.1e-26 93.2 1.0 1.4e-26 92.9 1.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4_10 PF13237.6 gi|15679251|ref|NP_276368.1| - 8.5e-11 41.8 2.3 0.00025 21.1 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15679251|ref|NP_276368.1| - 1.4e-10 40.5 11.9 5.5e-05 22.8 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679251|ref|NP_276368.1| - 3.1e-10 40.5 6.3 1e-09 38.8 6.9 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679251|ref|NP_276368.1| - 3.5e-09 36.6 5.8 0.00018 21.5 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679251|ref|NP_276368.1| - 5.9e-09 36.0 15.9 5.7e-07 29.6 7.0 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679251|ref|NP_276368.1| - 7.8e-08 32.7 0.4 0.011 16.2 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679251|ref|NP_276368.1| - 2.8e-07 30.3 11.1 0.00098 19.1 3.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679251|ref|NP_276368.1| - 7.6e-07 29.6 2.4 0.023 15.2 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679251|ref|NP_276368.1| - 2.3e-06 27.7 11.3 0.00035 20.9 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679251|ref|NP_276368.1| - 7.9e-06 26.7 7.3 0.0013 19.6 9.7 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|15679251|ref|NP_276368.1| - 1.2e-05 25.1 13.0 0.0017 18.3 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15679251|ref|NP_276368.1| - 0.00031 21.5 1.9 0.041 14.7 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679251|ref|NP_276368.1| - 0.017 15.6 7.8 0.77 10.3 2.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15679251|ref|NP_276368.1| - 0.035 15.0 18.4 0.2 12.7 6.7 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15679251|ref|NP_276368.1| - 0.093 12.9 8.1 0.27 11.4 0.9 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|15679251|ref|NP_276368.1| - 0.67 10.1 5.3 2 8.6 4.3 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4 PF00037.27 gi|15679252|ref|NP_276369.1| - 3.3e-74 242.0 145.3 1.4e-08 34.2 2.3 14.7 14 1 0 14 14 14 13 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679252|ref|NP_276369.1| - 3.4e-53 178.0 111.9 3.3e-10 40.4 7.5 9.7 6 3 4 10 10 10 10 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679252|ref|NP_276369.1| - 5.5e-48 159.2 144.9 2.1e-06 27.5 2.9 14.2 14 0 0 14 14 14 14 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679252|ref|NP_276369.1| - 1.5e-42 143.5 122.4 3e-08 33.6 8.3 11.6 5 3 8 13 13 13 13 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679252|ref|NP_276369.1| - 1e-41 141.7 103.3 0.00019 22.3 1.2 14.0 13 1 1 14 14 14 14 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15679252|ref|NP_276369.1| - 3.3e-41 139.2 117.5 7.5e-09 35.6 7.7 9.3 5 3 6 11 11 11 11 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679252|ref|NP_276369.1| - 4.2e-39 132.5 113.5 3.3e-09 36.7 10.9 10.1 7 3 2 10 10 10 10 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679252|ref|NP_276369.1| - 1.3e-37 125.6 139.3 3.8e-05 23.5 1.8 14.2 14 0 0 14 14 14 13 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679252|ref|NP_276369.1| - 3.3e-25 88.3 112.3 1.4e-07 31.8 3.4 12.4 9 3 4 13 13 13 10 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679252|ref|NP_276369.1| - 3.6e-22 77.0 139.7 0.0049 17.3 3.3 14.2 14 0 0 14 14 14 11 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679252|ref|NP_276369.1| - 1.6e-20 73.4 120.5 2.6e-07 31.1 3.0 12.4 5 4 7 13 13 13 9 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679252|ref|NP_276369.1| - 6.3e-19 67.5 160.5 0.0016 19.3 3.2 14.2 14 0 0 14 14 14 11 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15679252|ref|NP_276369.1| - 1.8e-09 37.8 117.6 0.00022 21.4 6.3 9.4 2 2 7 9 9 9 6 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|15679252|ref|NP_276369.1| - 3.6e-08 33.5 71.0 0.00043 20.4 1.2 7.6 4 3 3 7 7 7 6 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679252|ref|NP_276369.1| - 0.00012 22.5 128.7 0.0074 16.8 2.9 14.1 14 0 0 14 14 14 7 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15679252|ref|NP_276369.1| - 0.04 14.7 1.7 0.04 14.7 1.7 14.8 9 7 5 14 14 13 0 4Fe-4S single cluster domain DUF1275 PF06912.11 gi|15679253|ref|NP_276370.1| - 0.012 15.6 1.9 0.013 15.5 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1275) DUF2929 PF11151.8 gi|15679253|ref|NP_276370.1| - 0.072 13.4 1.1 0.11 12.8 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2929) DUF4199 PF13858.6 gi|15679253|ref|NP_276370.1| - 3.6 8.0 7.5 13 6.1 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) MnhB PF04039.13 gi|15679254|ref|NP_276371.1| - 3.3e-21 75.9 14.0 3.9e-21 75.6 14.0 1.1 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter Claudin_2 PF13903.6 gi|15679256|ref|NP_276373.1| - 8.2 6.1 9.5 3.1 7.5 7.1 1.5 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Proton_antipo_M PF00361.20 gi|15679257|ref|NP_276374.1| - 1.6e-29 103.0 25.4 1.6e-29 103.0 25.4 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 gi|15679257|ref|NP_276374.1| - 7.3e-07 28.8 10.1 7.3e-07 28.8 10.1 2.2 2 1 0 2 2 2 1 NADH dehydrogenase I, subunit N related protein Oxidored_q2 PF00420.24 gi|15679258|ref|NP_276375.1| - 3.1e-26 91.0 6.0 3.5e-26 90.9 6.0 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.9 gi|15679258|ref|NP_276375.1| - 1.1e-06 28.5 2.3 1.1e-06 28.5 2.3 2.0 2 0 0 2 2 2 1 Predicted membrane protein (DUF2108) DUF4040 PF13244.6 gi|15679259|ref|NP_276376.1| - 2.7e-17 62.7 10.5 3.3e-17 62.4 10.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) 7TM-7TMR_HD PF07698.11 gi|15679259|ref|NP_276376.1| - 0.032 14.0 6.2 0.034 13.9 6.2 1.0 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase B12D PF06522.11 gi|15679259|ref|NP_276376.1| - 0.044 13.6 3.6 0.2 11.4 0.1 2.7 3 0 0 3 3 3 0 NADH-ubiquinone reductase complex 1 MLRQ subunit DUF2109 PF09882.9 gi|15679259|ref|NP_276376.1| - 0.095 12.7 6.3 0.061 13.3 4.7 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2109) DUF4044 PF13253.6 gi|15679259|ref|NP_276376.1| - 1 8.9 6.8 1.3 8.6 3.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) DUF2070 PF09843.9 gi|15679259|ref|NP_276376.1| - 1.4 7.1 5.0 1.6 7.0 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PhaG_MnhG_YufB PF03334.14 gi|15679260|ref|NP_276377.1| - 7.5e-06 26.1 9.2 8.5e-05 22.7 9.2 2.4 1 1 0 1 1 1 1 Na+/H+ antiporter subunit DUF2109 PF09882.9 gi|15679260|ref|NP_276377.1| - 1.9e-05 24.6 2.2 2.6e-05 24.2 2.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2109) MrpF_PhaF PF04066.13 gi|15679261|ref|NP_276378.1| - 1e-09 38.7 4.1 1e-09 38.7 4.1 1.9 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) MNHE PF01899.16 gi|15679262|ref|NP_276379.1| - 4.4e-23 81.7 0.3 4.8e-23 81.5 0.3 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit YdjM PF04307.14 gi|15679263|ref|NP_276380.1| - 1.4e-19 70.0 3.6 4.5e-19 68.4 3.6 1.8 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase AstE_AspA PF04952.14 gi|15679264|ref|NP_276381.1| - 7.3e-15 54.8 0.0 4e-14 52.4 0.0 1.8 1 1 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M14 PF00246.24 gi|15679264|ref|NP_276381.1| - 0.00073 19.4 0.0 0.0041 17.0 0.0 1.9 1 1 0 1 1 1 1 Zinc carboxypeptidase aGPT-Pplase1 PF18723.1 gi|15679264|ref|NP_276381.1| - 0.13 11.6 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 Arginosuc_synth PF00764.19 gi|15679265|ref|NP_276382.1| - 4e-181 602.5 0.0 4.6e-181 602.3 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|15679265|ref|NP_276382.1| - 0.00068 19.2 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|15679265|ref|NP_276382.1| - 0.0083 15.8 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|15679265|ref|NP_276382.1| - 0.04 12.7 0.0 0.06 12.1 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase NAD_synthase PF02540.17 gi|15679265|ref|NP_276382.1| - 0.14 11.3 0.0 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 NAD synthase BofA PF07441.11 gi|15679266|ref|NP_276383.1| - 6.6e-09 35.8 21.7 1.6e-08 34.7 21.7 1.7 1 1 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Carb_kinase PF01256.17 gi|15679267|ref|NP_276384.1| - 3.9e-48 164.1 0.1 5e-48 163.7 0.1 1.1 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|15679267|ref|NP_276384.1| - 5.8e-44 150.0 0.3 2.7e-43 147.8 0.0 2.1 3 0 0 3 3 3 1 YjeF-related protein N-terminus HK PF02110.15 gi|15679267|ref|NP_276384.1| - 3e-06 26.8 0.1 2.4e-05 23.9 0.1 2.0 1 1 0 1 1 1 1 Hydroxyethylthiazole kinase family Ion_trans_2 PF07885.16 gi|15679268|ref|NP_276385.1| - 0.01 15.8 8.2 0.024 14.6 8.1 1.7 1 1 0 1 1 1 0 Ion channel 3H PF02829.14 gi|15679269|ref|NP_276386.1| - 2.8e-71 235.9 2.1 2.2e-24 85.5 0.0 3.8 3 0 0 3 3 3 3 3H domain TrkA_N PF02254.18 gi|15679269|ref|NP_276386.1| - 1.8e-32 112.0 0.4 9.9e-32 109.6 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|15679269|ref|NP_276386.1| - 0.0023 18.2 0.0 0.0071 16.6 0.0 1.9 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 gi|15679269|ref|NP_276386.1| - 0.066 13.7 0.1 0.36 11.3 0.0 2.2 1 1 1 2 2 2 0 Putative NAD(P)-binding RRM_occluded PF16842.5 gi|15679269|ref|NP_276386.1| - 0.072 13.0 1.1 11 5.9 0.0 3.2 3 0 0 3 3 3 0 Occluded RNA-recognition motif F420_oxidored PF03807.17 gi|15679269|ref|NP_276386.1| - 0.13 12.9 0.0 11 6.7 0.0 3.0 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent DUF1949 PF09186.11 gi|15679269|ref|NP_276386.1| - 0.33 10.9 1.1 58 3.7 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1949) UPF0180 PF03698.13 gi|15679269|ref|NP_276386.1| - 0.78 10.0 3.6 24 5.2 0.1 4.0 3 1 1 4 4 4 0 Uncharacterised protein family (UPF0180) FTR_C PF02741.15 gi|15679270|ref|NP_276387.1| - 8.5e-69 230.3 2.6 8.5e-69 230.3 2.6 1.6 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.18 gi|15679270|ref|NP_276387.1| - 7.7e-63 210.7 0.3 2.1e-62 209.3 0.0 1.8 3 0 0 3 3 3 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase GPAT_N PF14829.6 gi|15679270|ref|NP_276387.1| - 0.035 14.1 0.0 0.064 13.3 0.0 1.4 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal HisKA_2 PF07568.12 gi|15679271|ref|NP_276388.1| - 2.3e-13 50.0 0.1 9.7e-13 48.0 0.0 2.1 1 1 0 1 1 1 1 Histidine kinase PAS_4 PF08448.10 gi|15679271|ref|NP_276388.1| - 1.6e-11 44.5 0.0 3.1e-11 43.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|15679271|ref|NP_276388.1| - 4.7e-08 33.5 0.0 1.4e-07 32.0 0.0 1.8 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|15679271|ref|NP_276388.1| - 9e-06 25.7 0.0 1.9e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.7 gi|15679271|ref|NP_276388.1| - 0.00067 19.9 0.0 0.002 18.3 0.0 1.9 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|15679271|ref|NP_276388.1| - 0.0027 17.7 0.0 0.0072 16.3 0.0 1.8 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|15679271|ref|NP_276388.1| - 0.066 13.3 0.0 0.23 11.5 0.0 2.0 1 0 0 1 1 1 0 PAS domain LPG_synthase_TM PF03706.13 gi|15679272|ref|NP_276389.1| - 1.2e-53 182.6 31.2 1.5e-53 182.3 31.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region PrgI PF12666.7 gi|15679272|ref|NP_276389.1| - 0.064 14.0 1.2 0.064 14.0 1.2 3.8 3 2 0 3 3 3 0 PrgI family protein Tetraspanin PF00335.20 gi|15679272|ref|NP_276389.1| - 0.19 11.4 0.0 0.19 11.4 0.0 2.6 3 0 0 3 3 3 0 Tetraspanin family Pex24p PF06398.11 gi|15679272|ref|NP_276389.1| - 0.28 10.1 2.2 0.49 9.3 2.2 1.5 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin MotA_ExbB PF01618.16 gi|15679272|ref|NP_276389.1| - 2.6 7.8 9.3 0.64 9.8 3.4 2.7 2 1 0 2 2 2 0 MotA/TolQ/ExbB proton channel family SUR7 PF06687.12 gi|15679272|ref|NP_276389.1| - 4.9 6.7 13.2 0.23 11.0 6.3 2.2 2 0 0 2 2 2 0 SUR7/PalI family YfhO PF09586.10 gi|15679272|ref|NP_276389.1| - 8.4 4.5 10.0 9 4.4 3.2 2.3 2 0 0 2 2 2 0 Bacterial membrane protein YfhO Metallophos_2 PF12850.7 gi|15679273|ref|NP_276390.1| - 2.4e-29 102.7 0.0 2.8e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|15679273|ref|NP_276390.1| - 7.8e-08 33.1 3.1 1.6e-06 28.8 0.4 2.1 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|15679273|ref|NP_276390.1| - 0.0015 18.0 0.1 1.2 8.4 0.0 2.1 1 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily TRAM PF01938.20 gi|15679274|ref|NP_276391.1| - 2.7e-18 65.7 1.9 3.1e-18 65.5 1.9 1.1 1 0 0 1 1 1 1 TRAM domain TrkH PF02386.16 gi|15679275|ref|NP_276392.1| - 2.1e-57 194.7 22.0 1.8e-31 109.2 8.7 2.2 1 1 1 2 2 2 2 Cation transport protein TrkA_N PF02254.18 gi|15679276|ref|NP_276393.1| - 4.7e-33 113.9 0.9 8.2e-33 113.1 0.9 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|15679276|ref|NP_276393.1| - 2.7e-11 43.1 0.3 1.5e-10 40.8 0.2 2.2 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|15679276|ref|NP_276393.1| - 4.9e-07 30.1 0.1 1.1e-06 29.0 0.1 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|15679276|ref|NP_276393.1| - 0.00029 20.2 0.1 0.00047 19.5 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|15679276|ref|NP_276393.1| - 0.00035 21.1 1.9 0.00037 21.0 0.3 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15679276|ref|NP_276393.1| - 0.00058 20.0 0.1 0.0011 19.2 0.1 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain AdoHcyase_NAD PF00670.21 gi|15679276|ref|NP_276393.1| - 0.00089 19.4 0.6 0.0028 17.7 0.3 2.0 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ApbA PF02558.16 gi|15679276|ref|NP_276393.1| - 0.0019 17.9 0.1 0.0034 17.0 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 gi|15679276|ref|NP_276393.1| - 0.0045 16.9 0.2 0.0094 15.9 0.1 1.6 1 1 1 2 2 2 1 NAD(P)H-binding 3HCDH_N PF02737.18 gi|15679276|ref|NP_276393.1| - 0.0062 16.4 0.1 0.0098 15.8 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|15679276|ref|NP_276393.1| - 0.0065 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.14 gi|15679276|ref|NP_276393.1| - 0.007 15.6 0.2 0.012 14.8 0.2 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 gi|15679276|ref|NP_276393.1| - 0.015 15.9 0.6 0.034 14.7 0.2 2.0 2 1 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|15679276|ref|NP_276393.1| - 0.016 14.8 0.7 0.11 12.0 0.1 2.1 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XdhC_C PF13478.6 gi|15679276|ref|NP_276393.1| - 0.02 15.4 0.0 0.027 15.0 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain ADH_zinc_N PF00107.26 gi|15679276|ref|NP_276393.1| - 0.022 14.7 0.0 0.05 13.6 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase DAO PF01266.24 gi|15679276|ref|NP_276393.1| - 0.03 13.9 0.2 0.065 12.8 0.1 1.6 1 1 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|15679276|ref|NP_276393.1| - 0.039 12.8 0.0 0.057 12.3 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase DFP PF04127.15 gi|15679276|ref|NP_276393.1| - 0.053 13.3 0.1 0.12 12.2 0.0 1.5 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein HI0933_like PF03486.14 gi|15679276|ref|NP_276393.1| - 0.18 10.5 0.1 0.26 9.9 0.1 1.2 1 0 0 1 1 1 0 HI0933-like protein Lactamase_B PF00753.27 gi|15679278|ref|NP_276395.1| - 4e-22 79.2 5.3 8.3e-22 78.2 5.3 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15679278|ref|NP_276395.1| - 0.0039 16.7 0.3 0.0073 15.8 0.3 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Hjc PF01870.18 gi|15679279|ref|NP_276396.1| - 8.9e-34 115.4 0.0 1.1e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|15679279|ref|NP_276396.1| - 0.12 12.0 0.0 0.22 11.1 0.0 1.6 2 0 0 2 2 2 0 REase_AHJR-like zf-ribbon_3 PF13248.6 gi|15679281|ref|NP_276398.1| - 9.4e-09 34.4 0.5 1.3e-08 33.9 0.5 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15679281|ref|NP_276398.1| - 1.1e-07 31.3 3.3 1.5e-07 30.9 3.3 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15679281|ref|NP_276398.1| - 3.3e-06 27.0 0.4 4.7e-06 26.5 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|15679281|ref|NP_276398.1| - 0.00012 21.5 1.0 0.00022 20.7 1.0 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding TctB PF07331.11 gi|15679281|ref|NP_276398.1| - 0.0018 18.5 2.8 0.002 18.4 2.8 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Nudix_N_2 PF14803.6 gi|15679281|ref|NP_276398.1| - 0.0031 17.4 1.6 0.42 10.6 0.1 2.3 2 0 0 2 2 2 2 Nudix N-terminal zinc_ribbon_15 PF17032.5 gi|15679281|ref|NP_276398.1| - 0.04 14.7 1.5 0.055 14.2 1.5 1.2 1 0 0 1 1 1 0 zinc-ribbon family RNA_POL_M_15KD PF02150.16 gi|15679281|ref|NP_276398.1| - 0.044 13.7 1.3 0.5 10.3 0.1 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-RRN7 PF11781.8 gi|15679281|ref|NP_276398.1| - 0.069 12.9 5.1 1.4 8.6 4.3 2.2 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-tcix PF14952.6 gi|15679281|ref|NP_276398.1| - 0.11 12.1 2.8 0.19 11.4 2.8 1.3 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding RecR PF02132.15 gi|15679281|ref|NP_276398.1| - 0.21 11.2 3.4 1 9.0 0.1 2.3 1 1 1 2 2 2 0 RecR protein tRNA-synt_1g PF09334.11 gi|15679281|ref|NP_276398.1| - 0.32 9.7 0.1 0.36 9.5 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) Nucleos_tra2_N PF01773.20 gi|15679281|ref|NP_276398.1| - 0.47 11.1 8.3 2.2 8.9 2.9 2.2 1 1 1 2 2 2 0 Na+ dependent nucleoside transporter N-terminus UPF0547 PF10571.9 gi|15679281|ref|NP_276398.1| - 0.91 9.7 3.3 3.2 7.9 3.4 1.7 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 OrfB_Zn_ribbon PF07282.11 gi|15679281|ref|NP_276398.1| - 1.4 8.9 3.9 3.1 7.8 3.8 1.6 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DHHC PF01529.20 gi|15679281|ref|NP_276398.1| - 9.6 6.3 7.1 1.8 8.7 0.3 2.3 2 1 0 2 2 2 0 DHHC palmitoyltransferase DUF3755 PF12579.8 gi|15679282|ref|NP_276399.1| - 0.45 10.2 0.1 0.45 10.2 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3755) Radical_SAM PF04055.21 gi|15679283|ref|NP_276400.1| - 8.3e-05 23.0 0.0 0.00013 22.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily BATS PF06968.13 gi|15679283|ref|NP_276400.1| - 0.0019 18.3 0.0 0.004 17.3 0.0 1.5 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Fibrillarin_2 PF10113.9 gi|15679283|ref|NP_276400.1| - 0.077 11.6 0.0 0.094 11.3 0.0 1.1 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein GatB_N PF02934.15 gi|15679284|ref|NP_276401.1| - 1.6e-88 296.7 0.0 2e-88 296.3 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|15679284|ref|NP_276401.1| - 1.1e-43 148.7 0.5 1.7e-43 148.0 0.5 1.3 1 0 0 1 1 1 1 GatB domain MJ1316 PF04457.12 gi|15679285|ref|NP_276402.1| - 7.4e-13 49.0 0.2 8.2e-13 48.9 0.2 1.0 1 0 0 1 1 1 1 MJ1316 RNA cyclic group end recognition domain CBS PF00571.28 gi|15679286|ref|NP_276403.1| - 3.3e-28 97.9 5.2 1.9e-14 53.9 0.8 2.4 2 0 0 2 2 2 2 CBS domain ParBc PF02195.18 gi|15679286|ref|NP_276403.1| - 1.4e-15 57.3 0.0 3.8e-15 56.0 0.0 1.7 1 0 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|15679286|ref|NP_276403.1| - 0.00037 20.6 0.1 0.0021 18.2 0.1 2.0 1 1 0 1 1 1 1 Putative ParB-like nuclease Ubiquitin_2 PF14560.6 gi|15679286|ref|NP_276403.1| - 0.08 13.4 0.1 0.31 11.5 0.0 2.0 2 0 0 2 2 2 0 Ubiquitin-like domain PRA-PH PF01503.17 gi|15679287|ref|NP_276404.1| - 3.7e-17 62.5 0.6 4.3e-17 62.3 0.6 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|15679287|ref|NP_276404.1| - 0.0023 18.1 1.2 0.0036 17.4 1.2 1.4 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain Acetyltransf_1 PF00583.25 gi|15679288|ref|NP_276405.1| - 6e-16 58.7 0.0 8.6e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15679288|ref|NP_276405.1| - 1.3e-09 38.0 0.0 1.9e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15679288|ref|NP_276405.1| - 3.6e-08 33.7 0.0 6.1e-08 33.0 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15679288|ref|NP_276405.1| - 5.9e-06 26.2 0.0 1.1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|15679288|ref|NP_276405.1| - 0.0092 16.7 0.0 0.031 14.9 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|15679288|ref|NP_276405.1| - 0.042 14.0 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|15679288|ref|NP_276405.1| - 0.14 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ HxlR PF01638.17 gi|15679289|ref|NP_276406.1| - 2e-39 133.3 0.1 2.5e-39 133.0 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 gi|15679289|ref|NP_276406.1| - 0.0015 18.4 0.1 0.0022 17.9 0.1 1.3 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|15679289|ref|NP_276406.1| - 0.0016 18.4 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_12 PF08461.10 gi|15679289|ref|NP_276406.1| - 0.0031 17.4 0.0 0.0065 16.4 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_CodY PF08222.11 gi|15679289|ref|NP_276406.1| - 0.019 14.5 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF505 PF04458.12 gi|15679289|ref|NP_276406.1| - 0.024 13.0 0.0 0.028 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Replic_Relax PF13814.6 gi|15679289|ref|NP_276406.1| - 0.05 13.7 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_20 PF12840.7 gi|15679289|ref|NP_276406.1| - 0.053 13.6 0.0 0.088 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|15679289|ref|NP_276406.1| - 0.06 13.3 0.0 0.085 12.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix MarR_2 PF12802.7 gi|15679289|ref|NP_276406.1| - 0.079 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 MarR family AIRC PF00731.20 gi|15679290|ref|NP_276407.1| - 5.4e-20 71.5 1.9 8.1e-20 70.9 1.9 1.2 1 0 0 1 1 1 1 AIR carboxylase DUF3243 PF11588.8 gi|15679290|ref|NP_276407.1| - 0.23 11.8 0.0 0.43 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3243) Sua5_yciO_yrdC PF01300.18 gi|15679291|ref|NP_276408.1| - 8.2e-47 159.0 0.0 1.5e-46 158.2 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|15679291|ref|NP_276408.1| - 8.1e-28 95.9 15.5 6.1e-15 54.7 2.2 2.7 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|15679291|ref|NP_276408.1| - 1.5e-25 89.8 0.1 2.9e-25 88.9 0.1 1.4 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|15679291|ref|NP_276408.1| - 4.5e-05 23.8 0.1 0.0001 22.6 0.1 1.7 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|15679291|ref|NP_276408.1| - 5.3e-05 23.1 0.2 0.052 13.2 0.0 2.2 2 0 0 2 2 2 2 Glycoprotease family Zn-ribbon_8 PF09723.10 gi|15679291|ref|NP_276408.1| - 8.7 6.5 10.6 1.5e+02 2.6 6.4 3.0 2 1 0 2 2 2 0 Zinc ribbon domain HTH_5 PF01022.20 gi|15679292|ref|NP_276409.1| - 3.1e-15 55.8 0.0 1.7e-14 53.4 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15679292|ref|NP_276409.1| - 4.9e-09 36.1 0.3 1.2e-08 34.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain PadR PF03551.14 gi|15679292|ref|NP_276409.1| - 0.00014 21.7 0.1 0.002 18.0 0.0 2.5 2 1 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|15679292|ref|NP_276409.1| - 0.00026 20.5 1.6 0.002 17.6 1.6 2.2 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|15679292|ref|NP_276409.1| - 0.0026 17.6 0.0 0.0062 16.4 0.0 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15679292|ref|NP_276409.1| - 0.0065 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_12 PF08461.10 gi|15679292|ref|NP_276409.1| - 0.026 14.5 0.1 0.026 14.5 0.1 2.1 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_27 PF13463.6 gi|15679292|ref|NP_276409.1| - 0.032 14.7 0.0 0.059 13.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF3781 PF12636.7 gi|15679292|ref|NP_276409.1| - 0.051 13.5 0.0 0.1 12.5 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3781) HxlR PF01638.17 gi|15679292|ref|NP_276409.1| - 0.052 13.4 0.1 0.13 12.2 0.1 1.7 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_10 PF04967.12 gi|15679292|ref|NP_276409.1| - 0.065 13.0 0.2 0.99 9.3 0.0 2.6 2 0 0 2 2 2 0 HTH DNA binding domain HTH_CodY PF08222.11 gi|15679292|ref|NP_276409.1| - 0.1 12.1 0.7 0.41 10.2 0.1 2.0 1 1 1 2 2 2 0 CodY helix-turn-helix domain GrpE PF01025.19 gi|15679293|ref|NP_276410.1| - 2.5e-42 144.4 7.4 3.1e-42 144.1 7.4 1.1 1 0 0 1 1 1 1 GrpE Spc7 PF08317.11 gi|15679293|ref|NP_276410.1| - 0.00018 20.5 9.8 0.00022 20.2 9.8 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF812 PF05667.11 gi|15679293|ref|NP_276410.1| - 0.00027 20.0 14.3 0.00037 19.5 14.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) IFT57 PF10498.9 gi|15679293|ref|NP_276410.1| - 0.002 17.1 7.8 0.0026 16.8 7.8 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 TMPIT PF07851.13 gi|15679293|ref|NP_276410.1| - 0.0026 17.1 5.0 0.0031 16.8 5.0 1.1 1 0 0 1 1 1 1 TMPIT-like protein DUF148 PF02520.17 gi|15679293|ref|NP_276410.1| - 0.0045 17.1 7.8 0.0063 16.6 4.7 2.0 1 1 1 2 2 2 1 Domain of unknown function DUF148 Tropomyosin_1 PF12718.7 gi|15679293|ref|NP_276410.1| - 0.0046 17.1 14.9 0.007 16.5 14.9 1.3 1 0 0 1 1 1 1 Tropomyosin like DUF3829 PF12889.7 gi|15679293|ref|NP_276410.1| - 0.005 16.4 5.1 0.009 15.5 5.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3829) FAM184 PF15665.5 gi|15679293|ref|NP_276410.1| - 0.0054 16.5 9.2 0.0085 15.9 9.2 1.4 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B Exonuc_VII_L PF02601.15 gi|15679293|ref|NP_276410.1| - 0.0064 16.1 4.1 0.0077 15.8 4.1 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit Lebercilin PF15619.6 gi|15679293|ref|NP_276410.1| - 0.0065 16.1 13.5 0.011 15.4 13.5 1.4 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Tropomyosin PF00261.20 gi|15679293|ref|NP_276410.1| - 0.0069 15.8 15.5 0.0095 15.3 15.5 1.2 1 0 0 1 1 1 1 Tropomyosin Jnk-SapK_ap_N PF09744.9 gi|15679293|ref|NP_276410.1| - 0.0083 16.4 14.3 0.011 16.0 14.3 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Bacillus_HBL PF05791.11 gi|15679293|ref|NP_276410.1| - 0.022 14.6 7.2 0.23 11.3 6.4 2.0 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Surfac_D-trimer PF09006.11 gi|15679293|ref|NP_276410.1| - 0.024 14.5 0.3 0.13 12.2 0.3 2.0 1 1 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation DHR10 PF18595.1 gi|15679293|ref|NP_276410.1| - 0.025 14.6 15.4 0.035 14.1 13.6 2.0 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain ATG16 PF08614.11 gi|15679293|ref|NP_276410.1| - 0.027 14.7 16.7 0.048 13.9 12.0 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) EURL PF06937.11 gi|15679293|ref|NP_276410.1| - 0.027 13.9 6.0 0.036 13.5 6.0 1.2 1 0 0 1 1 1 0 EURL protein Ribosomal_S6 PF01250.17 gi|15679293|ref|NP_276410.1| - 0.029 14.6 1.8 0.38 11.0 0.0 2.7 2 1 0 2 2 2 0 Ribosomal protein S6 HemX PF04375.14 gi|15679293|ref|NP_276410.1| - 0.03 13.6 4.2 0.037 13.3 4.2 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5063 PF16702.5 gi|15679293|ref|NP_276410.1| - 0.032 14.6 3.6 0.046 14.1 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) Cytochrom_B562 PF07361.11 gi|15679293|ref|NP_276410.1| - 0.036 14.7 5.2 0.052 14.2 4.5 1.6 2 0 0 2 2 1 0 Cytochrome b562 Prominin PF05478.11 gi|15679293|ref|NP_276410.1| - 0.037 12.0 1.7 0.042 11.8 1.7 1.0 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 gi|15679293|ref|NP_276410.1| - 0.039 14.1 10.4 0.054 13.7 10.4 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF948 PF06103.11 gi|15679293|ref|NP_276410.1| - 0.04 14.2 0.8 0.19 12.0 0.5 2.0 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) YfiO PF13525.6 gi|15679293|ref|NP_276410.1| - 0.04 13.6 1.0 0.058 13.1 1.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Lectin_N PF03954.14 gi|15679293|ref|NP_276410.1| - 0.043 13.6 3.7 0.061 13.1 3.7 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain Peptidase_S64 PF08192.11 gi|15679293|ref|NP_276410.1| - 0.048 12.2 1.3 0.056 11.9 1.3 1.0 1 0 0 1 1 1 0 Peptidase family S64 Occludin_ELL PF07303.13 gi|15679293|ref|NP_276410.1| - 0.061 14.1 9.3 0.086 13.6 7.5 1.9 1 1 1 2 2 1 0 Occludin homology domain Z1 PF10593.9 gi|15679293|ref|NP_276410.1| - 0.076 12.5 3.1 0.11 12.0 3.1 1.2 1 0 0 1 1 1 0 Z1 domain DUF1192 PF06698.11 gi|15679293|ref|NP_276410.1| - 0.08 13.0 3.2 0.2 11.7 3.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) OmpH PF03938.14 gi|15679293|ref|NP_276410.1| - 0.081 13.3 15.2 0.14 12.5 15.2 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) BRE1 PF08647.11 gi|15679293|ref|NP_276410.1| - 0.082 13.0 16.6 0.25 11.4 16.8 1.7 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HMMR_N PF15905.5 gi|15679293|ref|NP_276410.1| - 0.083 12.4 13.6 0.1 12.0 13.6 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Fmp27_WPPW PF10359.9 gi|15679293|ref|NP_276410.1| - 0.1 11.4 7.1 0.12 11.2 7.1 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF3450 PF11932.8 gi|15679293|ref|NP_276410.1| - 0.12 11.6 9.8 0.17 11.2 9.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4200 PF13863.6 gi|15679293|ref|NP_276410.1| - 0.13 12.7 19.6 1 9.8 19.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Nup54 PF13874.6 gi|15679293|ref|NP_276410.1| - 0.13 12.4 8.0 0.23 11.6 8.0 1.4 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 PspA_IM30 PF04012.12 gi|15679293|ref|NP_276410.1| - 0.14 11.7 9.9 0.86 9.1 9.9 1.9 1 1 0 1 1 1 0 PspA/IM30 family Tho2 PF11262.8 gi|15679293|ref|NP_276410.1| - 0.14 11.3 7.9 0.19 10.9 7.9 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 T3SSipB PF16535.5 gi|15679293|ref|NP_276410.1| - 0.18 12.3 3.2 0.25 11.8 3.1 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB Med4 PF10018.9 gi|15679293|ref|NP_276410.1| - 0.23 11.1 11.1 0.46 10.1 10.9 1.6 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 PilJ PF13675.6 gi|15679293|ref|NP_276410.1| - 0.23 11.5 1.3 0.4 10.7 1.3 1.4 1 1 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term HAUS5 PF14817.6 gi|15679293|ref|NP_276410.1| - 0.23 10.2 8.3 0.26 10.0 8.3 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 HAUS6_N PF14661.6 gi|15679293|ref|NP_276410.1| - 0.26 10.9 5.9 0.34 10.4 5.9 1.4 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF16 PF01519.16 gi|15679293|ref|NP_276410.1| - 0.27 11.7 10.4 0.71 10.4 10.5 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 Nup88 PF10168.9 gi|15679293|ref|NP_276410.1| - 0.28 8.9 7.0 0.35 8.6 7.0 1.1 1 0 0 1 1 1 0 Nuclear pore component HrpB7 PF09486.10 gi|15679293|ref|NP_276410.1| - 0.3 11.5 7.3 0.67 10.3 7.3 1.7 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Atg14 PF10186.9 gi|15679293|ref|NP_276410.1| - 0.3 10.1 8.0 0.36 9.9 8.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mod_r PF07200.13 gi|15679293|ref|NP_276410.1| - 0.32 11.1 15.1 4.3 7.4 15.5 2.2 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein COG5 PF10392.9 gi|15679293|ref|NP_276410.1| - 0.34 11.1 6.0 0.35 11.0 2.1 2.1 1 1 1 2 2 2 0 Golgi transport complex subunit 5 DUF4208 PF13907.6 gi|15679293|ref|NP_276410.1| - 0.34 11.4 6.1 0.7 10.4 6.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4208) Cob_adeno_trans PF01923.18 gi|15679293|ref|NP_276410.1| - 0.36 11.0 4.2 0.58 10.3 4.2 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase P4Ha_N PF08336.11 gi|15679293|ref|NP_276410.1| - 0.36 10.8 7.8 0.94 9.5 7.8 1.7 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region YtxH PF12732.7 gi|15679293|ref|NP_276410.1| - 0.39 11.3 2.7 1.1 9.8 2.7 1.9 1 1 0 1 1 1 0 YtxH-like protein FapA PF03961.13 gi|15679293|ref|NP_276410.1| - 0.45 9.1 11.3 0.55 8.8 11.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1664 PF07889.12 gi|15679293|ref|NP_276410.1| - 0.47 10.5 5.5 1.8 8.6 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 gi|15679293|ref|NP_276410.1| - 0.51 10.4 18.7 0.81 9.8 18.7 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus V-SNARE PF05008.15 gi|15679293|ref|NP_276410.1| - 0.6 10.5 12.5 0.67 10.4 11.3 1.7 2 0 0 2 2 1 0 Vesicle transport v-SNARE protein N-terminus V_ATPase_I PF01496.19 gi|15679293|ref|NP_276410.1| - 0.61 7.9 5.7 0.63 7.9 5.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family IL2 PF00715.17 gi|15679293|ref|NP_276410.1| - 0.61 10.0 4.9 0.87 9.5 4.9 1.1 1 0 0 1 1 1 0 Interleukin 2 DASH_Hsk3 PF08227.11 gi|15679293|ref|NP_276410.1| - 0.66 10.4 2.9 4 7.9 0.5 2.2 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like DUF2381 PF09544.10 gi|15679293|ref|NP_276410.1| - 0.68 9.4 2.4 0.95 8.9 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2381) DUF724 PF05266.14 gi|15679293|ref|NP_276410.1| - 0.78 9.5 10.3 1.1 9.0 10.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) APG6_N PF17675.1 gi|15679293|ref|NP_276410.1| - 0.86 10.1 20.8 0.65 10.5 18.8 1.7 1 1 1 2 2 1 0 Apg6 coiled-coil region DUF641 PF04859.12 gi|15679293|ref|NP_276410.1| - 0.94 9.8 11.4 2.1 8.7 9.0 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4449 PF14613.6 gi|15679293|ref|NP_276410.1| - 1.1 9.3 6.9 4.5 7.4 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4449) Hemagglutinin PF00509.18 gi|15679293|ref|NP_276410.1| - 1.2 7.4 4.6 1.6 7.1 4.6 1.1 1 0 0 1 1 1 0 Haemagglutinin Prefoldin_2 PF01920.20 gi|15679293|ref|NP_276410.1| - 1.3 9.0 19.0 0.11 12.5 9.2 2.8 1 1 0 1 1 1 0 Prefoldin subunit YlqD PF11068.8 gi|15679293|ref|NP_276410.1| - 1.4 9.3 12.8 4.8 7.6 11.7 2.0 1 1 1 2 2 2 0 YlqD protein SlyX PF04102.12 gi|15679293|ref|NP_276410.1| - 1.4 9.6 10.1 13 6.4 7.1 2.8 1 1 1 2 2 2 0 SlyX FAM76 PF16046.5 gi|15679293|ref|NP_276410.1| - 1.4 8.2 9.4 2 7.7 9.4 1.3 1 0 0 1 1 1 0 FAM76 protein DCB PF16213.5 gi|15679293|ref|NP_276410.1| - 1.7 8.3 6.2 9.3 5.9 6.2 2.0 1 1 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 PhoU PF01895.19 gi|15679293|ref|NP_276410.1| - 1.8 9.1 9.7 13 6.3 9.4 2.2 1 1 0 1 1 1 0 PhoU domain DUF4407 PF14362.6 gi|15679293|ref|NP_276410.1| - 1.8 7.8 7.8 4.4 6.6 7.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ESM4 PF15952.5 gi|15679293|ref|NP_276410.1| - 2 8.8 6.7 2.4 8.5 6.7 1.1 1 0 0 1 1 1 0 Enhancer of split M4 family FlaC_arch PF05377.11 gi|15679293|ref|NP_276410.1| - 2.1 8.8 10.9 9.5 6.7 0.9 3.3 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) FTA4 PF13093.6 gi|15679293|ref|NP_276410.1| - 2.1 8.2 15.6 3.4 7.5 15.6 1.6 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 HR1 PF02185.16 gi|15679293|ref|NP_276410.1| - 2.1 8.5 13.8 7.7 6.7 10.7 2.9 2 1 0 2 2 2 0 Hr1 repeat LMBR1 PF04791.16 gi|15679293|ref|NP_276410.1| - 2.2 7.1 3.8 2.7 6.8 3.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein CorA PF01544.18 gi|15679293|ref|NP_276410.1| - 2.5 7.3 10.4 3.6 6.8 10.4 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein HIP1_clath_bdg PF16515.5 gi|15679293|ref|NP_276410.1| - 2.6 8.7 14.7 2.4 8.8 5.9 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4404 PF14357.6 gi|15679293|ref|NP_276410.1| - 2.7 8.7 10.7 9.9 6.9 0.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) DUF883 PF05957.13 gi|15679293|ref|NP_276410.1| - 2.7 8.6 5.0 5.1 7.8 0.7 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) BST2 PF16716.5 gi|15679293|ref|NP_276410.1| - 2.7 8.6 13.9 9.1 6.9 13.9 1.9 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 Phage_GPO PF05929.11 gi|15679293|ref|NP_276410.1| - 2.8 7.5 6.7 3.8 7.0 6.7 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2408 PF10303.9 gi|15679293|ref|NP_276410.1| - 3.4 8.2 13.2 17 6.0 13.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) DUF4061 PF13270.6 gi|15679293|ref|NP_276410.1| - 3.8 7.9 10.7 1.1 9.7 3.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4061) ABC_tran_CTD PF16326.5 gi|15679293|ref|NP_276410.1| - 3.8 7.8 16.2 9 6.6 14.7 2.2 1 1 1 2 2 2 0 ABC transporter C-terminal domain DUF4446 PF14584.6 gi|15679293|ref|NP_276410.1| - 5.7 6.9 8.5 25 4.8 5.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) CENP-H PF05837.12 gi|15679293|ref|NP_276410.1| - 5.9 7.4 12.3 8.5 6.8 11.6 1.6 1 1 1 2 2 2 0 Centromere protein H (CENP-H) CENP-Q PF13094.6 gi|15679293|ref|NP_276410.1| - 8.6 6.5 15.7 16 5.6 15.7 1.4 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Spc24 PF08286.11 gi|15679293|ref|NP_276410.1| - 9.5 6.5 14.6 53 4.1 14.6 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 HSP70 PF00012.20 gi|15679294|ref|NP_276411.1| - 2.2e-229 762.6 13.7 1.1e-226 753.8 13.7 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|15679294|ref|NP_276411.1| - 2e-20 72.9 4.7 2e-20 72.9 4.7 2.2 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 gi|15679294|ref|NP_276411.1| - 2.6e-05 24.0 0.0 4.3e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain StbA PF06406.11 gi|15679294|ref|NP_276411.1| - 0.0007 18.9 0.5 0.0094 15.2 0.1 2.6 2 1 1 3 3 3 1 StbA protein CDC45 PF02724.14 gi|15679294|ref|NP_276411.1| - 0.006 14.9 0.2 0.0085 14.4 0.2 1.1 1 0 0 1 1 1 1 CDC45-like protein RNA_pol_Rpb2_2 PF04561.14 gi|15679294|ref|NP_276411.1| - 0.017 14.8 2.5 0.033 13.8 2.5 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 NOG1_N PF17835.1 gi|15679294|ref|NP_276411.1| - 0.048 13.6 4.1 0.026 14.5 1.7 1.7 2 0 0 2 2 2 0 NOG1 N-terminal helical domain FtsA PF14450.6 gi|15679294|ref|NP_276411.1| - 0.077 13.4 4.8 1 9.9 0.0 3.9 3 2 0 3 3 3 0 Cell division protein FtsA DUF1090 PF06476.12 gi|15679294|ref|NP_276411.1| - 0.22 11.7 14.3 0.51 10.5 14.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) DUF45 PF01863.17 gi|15679294|ref|NP_276411.1| - 0.88 9.6 5.4 0.54 10.3 3.0 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF45 DnaJ_C PF01556.18 gi|15679295|ref|NP_276412.1| - 3.8e-46 156.8 0.0 5.4e-46 156.4 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|15679295|ref|NP_276412.1| - 2.1e-27 95.0 4.1 3.8e-27 94.2 4.1 1.5 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|15679295|ref|NP_276412.1| - 1.9e-13 50.6 17.4 3.1e-13 49.9 17.4 1.4 1 0 0 1 1 1 1 DnaJ central domain TackOD1 PF18551.1 gi|15679295|ref|NP_276412.1| - 0.065 12.9 5.4 0.22 11.2 0.5 2.2 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Anti-TRAP PF15777.5 gi|15679295|ref|NP_276412.1| - 0.13 12.2 17.4 0.86 9.6 5.0 2.8 1 1 2 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein DZR PF12773.7 gi|15679295|ref|NP_276412.1| - 0.78 9.8 10.7 4.5 7.4 10.7 2.0 1 1 1 2 2 2 0 Double zinc ribbon DUF948 PF06103.11 gi|15679296|ref|NP_276413.1| - 0.00096 19.4 4.0 1.2 9.4 0.0 2.8 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) Phasin PF05597.11 gi|15679296|ref|NP_276413.1| - 0.0022 18.0 1.1 0.0042 17.1 0.1 1.7 2 0 0 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) NTS_2 PF15448.6 gi|15679296|ref|NP_276413.1| - 0.037 14.4 0.4 0.1 13.0 0.3 1.8 1 1 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein HSBP1 PF06825.12 gi|15679296|ref|NP_276413.1| - 0.037 13.9 4.6 3 7.8 0.3 3.1 2 2 1 3 3 3 0 Heat shock factor binding protein 1 DUF4446 PF14584.6 gi|15679296|ref|NP_276413.1| - 0.053 13.5 0.9 0.22 11.5 0.3 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4446) LIF_OSM PF01291.17 gi|15679296|ref|NP_276413.1| - 0.063 13.4 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 LIF / OSM family DUF4349 PF14257.6 gi|15679296|ref|NP_276413.1| - 0.07 12.6 0.3 0.07 12.6 0.3 2.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4349) DUF3498 PF12004.8 gi|15679296|ref|NP_276413.1| - 0.077 12.2 2.3 0.077 12.2 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) NPV_P10 PF05531.12 gi|15679296|ref|NP_276413.1| - 0.096 13.2 0.3 0.39 11.2 0.1 1.9 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4407 PF14362.6 gi|15679296|ref|NP_276413.1| - 0.16 11.3 0.5 0.26 10.6 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Matrilin_ccoil PF10393.9 gi|15679296|ref|NP_276413.1| - 0.21 11.5 6.6 0.31 10.9 0.3 2.8 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF1664 PF07889.12 gi|15679296|ref|NP_276413.1| - 5.4 7.1 6.1 1.4 9.0 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) LapA_dom PF06305.11 gi|15679297|ref|NP_276414.1| - 0.054 13.3 7.7 0.28 11.0 0.4 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain COG2 PF06148.11 gi|15679297|ref|NP_276414.1| - 0.37 10.9 6.3 0.67 10.1 6.3 1.5 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 MtrG PF04210.13 gi|15679297|ref|NP_276414.1| - 1.3 8.9 3.8 9.7 6.1 0.0 2.5 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G AAA_23 PF13476.6 gi|15679297|ref|NP_276414.1| - 1.8 9.1 7.5 2.1 8.8 7.5 1.1 1 0 0 1 1 1 0 AAA domain DUF4446 PF14584.6 gi|15679297|ref|NP_276414.1| - 3.1 7.8 9.1 0.81 9.7 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Peptidase_M24 PF00557.24 gi|15679298|ref|NP_276415.1| - 2.9e-41 141.5 0.1 4e-41 141.0 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 FrhB_FdhB_C PF04432.13 gi|15679299|ref|NP_276416.1| - 3e-41 140.8 0.1 3.9e-41 140.4 0.1 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|15679299|ref|NP_276416.1| - 4.5e-29 100.4 0.1 8.8e-29 99.5 0.0 1.5 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Oxidored_q6 PF01058.22 gi|15679300|ref|NP_276417.1| - 1.5e-26 92.8 0.1 1.5e-26 92.8 0.1 2.0 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|15679300|ref|NP_276417.1| - 2.2e-12 46.2 10.3 9e-07 28.5 1.0 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679300|ref|NP_276417.1| - 6.1e-09 35.6 7.9 0.00071 19.5 1.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679300|ref|NP_276417.1| - 1.9e-07 30.7 13.1 0.00087 19.2 2.4 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679300|ref|NP_276417.1| - 1.4e-06 28.3 11.1 4.6e-06 26.7 11.1 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679300|ref|NP_276417.1| - 1.9e-05 24.7 11.4 0.00017 21.7 11.4 2.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679300|ref|NP_276417.1| - 3.5e-05 24.3 12.5 3.5e-05 24.3 12.5 2.6 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679300|ref|NP_276417.1| - 0.00013 22.0 23.3 0.0012 18.9 13.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679300|ref|NP_276417.1| - 0.0065 17.4 15.6 0.03 15.3 4.1 3.3 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15679300|ref|NP_276417.1| - 0.023 15.2 20.3 0.051 14.1 2.9 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679300|ref|NP_276417.1| - 0.04 14.7 11.2 0.93 10.3 0.7 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|15679300|ref|NP_276417.1| - 0.041 14.3 15.7 0.058 13.8 0.9 3.0 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679300|ref|NP_276417.1| - 0.15 12.6 0.6 0.15 12.6 0.6 3.4 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I zf-C2H2_11 PF16622.5 gi|15679300|ref|NP_276417.1| - 0.16 11.8 0.4 0.16 11.8 0.4 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type Fer4_17 PF13534.6 gi|15679300|ref|NP_276417.1| - 1.2 9.7 20.9 0.25 11.9 2.2 2.8 2 1 2 4 4 4 0 4Fe-4S dicluster domain HycI PF01750.18 gi|15679301|ref|NP_276418.1| - 2.3e-38 130.9 0.0 2.8e-38 130.7 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease DUF169 PF02596.15 gi|15679301|ref|NP_276418.1| - 0.096 12.6 0.1 0.38 10.6 0.0 1.8 1 1 1 2 2 2 0 Uncharacterised ArCR, COG2043 NiFeSe_Hases PF00374.19 gi|15679302|ref|NP_276419.1| - 2.8e-41 142.0 7.5 4.2e-23 82.0 0.0 5.3 3 2 2 5 5 5 5 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 gi|15679302|ref|NP_276419.1| - 0.0081 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PepSY PF03413.19 gi|15679303|ref|NP_276420.1| - 6.1e-07 29.9 0.0 1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase propeptide and YPEB domain YhzD PF14120.6 gi|15679303|ref|NP_276420.1| - 0.096 12.8 0.0 0.21 11.7 0.0 1.5 2 0 0 2 2 2 0 YhzD-like protein RAP1 PF07218.11 gi|15679303|ref|NP_276420.1| - 2.7 6.2 5.0 3.1 6.0 5.0 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) PAC2 PF09754.9 gi|15679304|ref|NP_276421.1| - 7.9e-42 143.7 0.0 9.1e-42 143.5 0.0 1.0 1 0 0 1 1 1 1 PAC2 family PHP_C PF13263.6 gi|15679305|ref|NP_276422.1| - 6.2e-06 25.9 0.0 1.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 PHP-associated PAC2 PF09754.9 gi|15679306|ref|NP_276423.1| - 7.9e-37 127.3 0.0 9e-37 127.1 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.12 gi|15679307|ref|NP_276424.1| - 1e-23 83.1 1.9 1.1e-23 83.0 1.9 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family DUF1272 PF06906.11 gi|15679307|ref|NP_276424.1| - 0.00059 19.9 1.3 0.0008 19.4 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) PolC_DP2 PF03833.13 gi|15679307|ref|NP_276424.1| - 0.0026 15.7 0.2 0.0026 15.7 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 RecR PF02132.15 gi|15679307|ref|NP_276424.1| - 0.0026 17.3 0.6 0.0035 16.9 0.6 1.2 1 0 0 1 1 1 1 RecR protein DUF35_N PF12172.8 gi|15679307|ref|NP_276424.1| - 0.0077 16.1 5.7 0.0077 16.1 5.7 1.8 1 1 1 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.6 gi|15679307|ref|NP_276424.1| - 0.013 14.9 5.4 0.056 12.9 5.4 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 gi|15679307|ref|NP_276424.1| - 0.032 14.5 1.4 0.055 13.7 1.4 1.5 1 0 0 1 1 1 0 Ribosomal L32p protein family HypA PF01155.19 gi|15679307|ref|NP_276424.1| - 0.078 13.0 1.3 0.1 12.6 1.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NRDD PF13597.6 gi|15679307|ref|NP_276424.1| - 0.083 11.7 1.6 0.096 11.4 1.6 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zf-NADH-PPase PF09297.11 gi|15679307|ref|NP_276424.1| - 0.19 11.4 4.8 0.67 9.7 0.7 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|15679307|ref|NP_276424.1| - 0.25 11.5 3.2 0.55 10.4 3.2 1.8 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.10 gi|15679307|ref|NP_276424.1| - 0.47 10.6 6.5 4.2 7.6 6.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-ISL3 PF14690.6 gi|15679307|ref|NP_276424.1| - 0.58 10.9 6.0 0.65 10.7 0.7 2.3 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.7 gi|15679307|ref|NP_276424.1| - 1.1 9.3 6.7 0.29 11.2 0.7 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain YhfH PF14149.6 gi|15679307|ref|NP_276424.1| - 1.5 8.9 6.4 1.7 8.7 0.4 2.2 1 1 1 2 2 2 0 YhfH-like protein UPF0547 PF10571.9 gi|15679307|ref|NP_276424.1| - 3.5 7.8 7.1 7.4 6.8 1.6 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 EIF_2_alpha PF07541.12 gi|15679308|ref|NP_276425.1| - 3.4e-25 88.4 0.0 7e-25 87.4 0.0 1.5 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|15679308|ref|NP_276425.1| - 9.8e-10 38.6 0.1 1.8e-09 37.8 0.1 1.5 1 0 0 1 1 1 1 S1 RNA binding domain GRAS PF03514.14 gi|15679308|ref|NP_276425.1| - 0.075 12.0 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 GRAS domain family Ribosomal_S27e PF01667.17 gi|15679309|ref|NP_276426.1| - 2.1e-29 101.0 1.0 2.3e-29 100.8 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 A2L_zn_ribbon PF08792.10 gi|15679309|ref|NP_276426.1| - 0.01 15.5 1.2 0.019 14.7 1.2 1.4 1 0 0 1 1 1 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|15679309|ref|NP_276426.1| - 0.023 14.2 0.6 0.036 13.6 0.6 1.4 1 1 0 1 1 1 0 TFIIB zinc-binding DUF3797 PF12677.7 gi|15679309|ref|NP_276426.1| - 0.025 14.5 2.0 1.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) HypA PF01155.19 gi|15679309|ref|NP_276426.1| - 0.026 14.5 0.3 0.027 14.5 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-BED PF02892.15 gi|15679309|ref|NP_276426.1| - 0.028 14.4 0.8 0.48 10.5 0.1 2.1 2 0 0 2 2 2 0 BED zinc finger OrfB_Zn_ribbon PF07282.11 gi|15679309|ref|NP_276426.1| - 0.053 13.5 0.2 0.06 13.3 0.2 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain BIR PF00653.21 gi|15679309|ref|NP_276426.1| - 0.24 12.1 1.4 12 6.6 0.1 2.1 1 1 1 2 2 2 0 Inhibitor of Apoptosis domain Ribosomal_L44 PF00935.19 gi|15679310|ref|NP_276427.1| - 5.8e-24 84.4 4.5 8.4e-24 83.9 4.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|15679310|ref|NP_276427.1| - 3.5e-05 24.2 3.9 0.0017 18.7 0.7 2.4 2 0 0 2 2 2 2 Ribosomal protein L33 NOB1_Zn_bind PF08772.11 gi|15679310|ref|NP_276427.1| - 0.0018 18.4 1.8 0.073 13.2 0.1 2.1 2 0 0 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.10 gi|15679310|ref|NP_276427.1| - 0.012 15.7 1.2 2.8 8.1 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|15679310|ref|NP_276427.1| - 0.017 14.8 5.2 0.56 10.0 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|15679310|ref|NP_276427.1| - 0.032 14.0 2.2 0.93 9.3 0.5 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-LITAF-like PF10601.9 gi|15679310|ref|NP_276427.1| - 0.069 13.4 0.6 1.6 9.1 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Zn_Tnp_IS91 PF14319.6 gi|15679310|ref|NP_276427.1| - 0.074 13.1 2.8 0.99 9.5 0.5 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain TF_Zn_Ribbon PF08271.12 gi|15679310|ref|NP_276427.1| - 0.086 12.4 0.7 4.6 6.8 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-trcl PF13451.6 gi|15679310|ref|NP_276427.1| - 0.13 12.2 3.2 2.8 7.9 0.1 2.3 2 0 0 2 2 2 0 Probable zinc-ribbon domain zf-H2C2_2 PF13465.6 gi|15679310|ref|NP_276427.1| - 0.54 10.8 6.5 7.7 7.1 0.5 2.5 2 1 0 2 2 2 0 Zinc-finger double domain Zn_Tnp_IS1595 PF12760.7 gi|15679310|ref|NP_276427.1| - 1.5 8.8 6.7 17 5.5 2.5 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain PCNA_N PF00705.18 gi|15679312|ref|NP_276429.1| - 7.1e-22 77.5 0.4 1.4e-21 76.5 0.4 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 gi|15679312|ref|NP_276429.1| - 1.3e-09 37.9 0.0 1.6e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Rad9 PCNA_C PF02747.15 gi|15679312|ref|NP_276429.1| - 1.1e-05 25.7 0.2 0.0011 19.2 0.1 3.0 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|15679312|ref|NP_276429.1| - 0.00013 21.2 0.1 0.011 14.8 0.0 2.3 1 1 0 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Hus1 PF04005.12 gi|15679312|ref|NP_276429.1| - 0.00028 20.1 0.0 0.00046 19.4 0.0 1.4 2 0 0 2 2 2 1 Hus1-like protein DNA_pol3_beta_2 PF02767.16 gi|15679312|ref|NP_276429.1| - 0.028 14.6 0.2 0.12 12.6 0.1 1.9 2 0 0 2 2 2 0 DNA polymerase III beta subunit, central domain PH_15 PF17339.2 gi|15679312|ref|NP_276429.1| - 0.15 12.0 0.0 0.41 10.6 0.0 1.7 2 0 0 2 2 2 0 PH domain SLC35F PF06027.12 gi|15679313|ref|NP_276430.1| - 0.08 12.4 1.4 0.095 12.2 1.4 1.1 1 0 0 1 1 1 0 Solute carrier family 35 ThrE PF06738.12 gi|15679313|ref|NP_276430.1| - 0.094 12.1 4.7 0.11 11.9 4.7 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF2754 PF10953.8 gi|15679313|ref|NP_276430.1| - 0.13 12.5 0.2 0.27 11.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) DUF2157 PF09925.9 gi|15679313|ref|NP_276430.1| - 2.8 7.7 6.6 4.5 7.1 0.5 2.4 2 1 0 2 2 2 0 Predicted membrane protein (DUF2157) TFIIS_C PF01096.18 gi|15679314|ref|NP_276431.1| - 9.6e-18 63.8 7.6 9.6e-18 63.8 7.6 3.4 4 0 0 4 4 4 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|15679314|ref|NP_276431.1| - 1.4e-05 24.9 3.4 1.4e-05 24.9 3.4 3.4 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zf-NADH-PPase PF09297.11 gi|15679314|ref|NP_276431.1| - 0.00013 21.5 1.7 0.00013 21.5 1.7 3.0 3 0 0 3 3 3 1 NADH pyrophosphatase zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|15679314|ref|NP_276431.1| - 0.00028 20.8 2.5 0.00028 20.8 2.5 2.9 2 1 0 2 2 2 2 Transposase zinc-ribbon domain SelR PF01641.18 gi|15679314|ref|NP_276431.1| - 0.012 15.7 1.0 0.012 15.7 1.0 2.0 1 1 0 2 2 2 0 SelR domain IBR PF01485.21 gi|15679314|ref|NP_276431.1| - 0.013 15.7 17.4 0.016 15.4 1.4 3.5 2 2 1 3 3 3 0 IBR domain, a half RING-finger domain zinc_ribbon_2 PF13240.6 gi|15679314|ref|NP_276431.1| - 0.014 15.1 12.4 0.14 11.9 0.1 4.1 4 0 0 4 4 4 0 zinc-ribbon domain FdhE PF04216.12 gi|15679314|ref|NP_276431.1| - 0.017 15.0 3.0 0.048 13.5 0.1 2.1 2 0 0 2 2 2 0 Protein involved in formate dehydrogenase formation OrfB_Zn_ribbon PF07282.11 gi|15679314|ref|NP_276431.1| - 0.025 14.5 16.1 0.073 13.0 1.0 3.4 3 1 0 3 3 3 0 Putative transposase DNA-binding domain zf-Mss51 PF13824.6 gi|15679314|ref|NP_276431.1| - 0.028 14.5 7.2 0.16 12.1 1.2 2.9 3 1 0 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 VP_N-CPKC PF11475.8 gi|15679314|ref|NP_276431.1| - 0.056 13.4 5.0 2.5 8.1 0.3 3.0 2 1 1 3 3 3 0 Virion protein N terminal domain DUF2752 PF10825.8 gi|15679314|ref|NP_276431.1| - 0.12 12.5 1.8 0.37 10.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF35_N PF12172.8 gi|15679314|ref|NP_276431.1| - 0.14 12.1 6.7 0.87 9.5 0.1 3.3 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|15679314|ref|NP_276431.1| - 0.2 11.8 16.9 0.39 10.9 0.8 4.0 4 0 0 4 4 4 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|15679314|ref|NP_276431.1| - 0.29 11.1 19.5 0.24 11.4 1.4 4.2 5 1 0 5 5 5 0 zinc-ribbon domain NOB1_Zn_bind PF08772.11 gi|15679314|ref|NP_276431.1| - 0.37 11.0 11.5 3.1 8.0 4.0 3.4 3 1 0 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zf-ACC PF17848.1 gi|15679314|ref|NP_276431.1| - 0.42 10.7 12.9 3.9 7.6 0.1 4.0 4 0 0 4 4 3 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 gi|15679314|ref|NP_276431.1| - 0.7 10.0 14.0 0.4 10.7 3.3 2.9 2 1 1 3 3 3 0 Double zinc ribbon Rpr2 PF04032.16 gi|15679314|ref|NP_276431.1| - 0.79 10.0 8.4 3.9 7.8 8.4 2.0 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-ribbon_3 PF13248.6 gi|15679314|ref|NP_276431.1| - 0.95 9.0 16.7 0.65 9.5 2.8 3.5 4 1 0 4 4 4 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|15679314|ref|NP_276431.1| - 0.99 9.1 9.8 6.7 6.4 0.1 3.7 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-TFIIB PF13453.6 gi|15679314|ref|NP_276431.1| - 2.3 7.6 11.6 2.6 7.5 3.4 3.1 3 1 0 3 3 3 0 Transcription factor zinc-finger Plasmod_Pvs28 PF06247.11 gi|15679314|ref|NP_276431.1| - 6.3 7.2 10.1 46 4.4 10.1 2.4 1 1 0 1 1 1 0 Pvs28 EGF domain NUDIX PF00293.28 gi|15679315|ref|NP_276432.1| - 1.2e-23 83.6 0.0 1.3e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|15679315|ref|NP_276432.1| - 0.032 13.7 0.0 0.35 10.4 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4916) DUF99 PF01949.16 gi|15679316|ref|NP_276433.1| - 3.1e-70 235.3 0.2 3.5e-70 235.1 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 LPD22 PF18834.1 gi|15679316|ref|NP_276433.1| - 0.038 14.2 0.0 4.9 7.4 0.0 2.2 2 0 0 2 2 2 0 Large polyvalent protein associated domain 22 Endonuclease_5 PF04493.14 gi|15679316|ref|NP_276433.1| - 0.043 13.5 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Endonuclease V SH3_15 PF18346.1 gi|15679316|ref|NP_276433.1| - 0.044 14.1 0.1 0.11 12.8 0.1 1.7 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain RNA_pol_L_2 PF13656.6 gi|15679317|ref|NP_276434.1| - 2e-20 72.4 0.0 2.5e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|15679317|ref|NP_276434.1| - 5.1e-05 22.6 0.0 0.00023 20.5 0.0 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ECR1_N PF14382.6 gi|15679318|ref|NP_276435.1| - 5.9e-09 35.6 0.0 1.1e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 gi|15679318|ref|NP_276435.1| - 2.2e-05 25.0 0.8 0.063 13.9 0.1 2.7 2 1 1 3 3 3 2 Exosome component EXOSC1/CSL4 A2L_zn_ribbon PF08792.10 gi|15679318|ref|NP_276435.1| - 0.00082 19.0 0.8 0.0015 18.2 0.8 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain HypA PF01155.19 gi|15679318|ref|NP_276435.1| - 0.015 15.3 0.1 0.022 14.8 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TerY_C PF15616.6 gi|15679318|ref|NP_276435.1| - 0.079 13.1 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain DNA_RNApol_7kD PF03604.13 gi|15679318|ref|NP_276435.1| - 0.12 12.0 3.7 0.25 11.1 3.7 1.5 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Defensin_5 PF18251.1 gi|15679318|ref|NP_276435.1| - 0.19 11.8 1.2 0.34 11.0 1.2 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin zinc_ribbon_4 PF13717.6 gi|15679318|ref|NP_276435.1| - 0.7 9.9 6.0 3.5 7.6 0.3 2.5 1 1 1 2 2 2 0 zinc-ribbon domain Diphthamide_syn PF01866.17 gi|15679319|ref|NP_276436.1| - 4.1e-85 285.9 0.0 4.7e-85 285.7 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Pribosyltran PF00156.27 gi|15679320|ref|NP_276437.1| - 4.1e-19 68.7 1.3 5.8e-19 68.2 1.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|15679320|ref|NP_276437.1| - 0.00031 20.3 0.1 0.00043 19.8 0.1 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|15679320|ref|NP_276437.1| - 0.003 17.1 0.2 0.004 16.7 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase SRP54 PF00448.22 gi|15679321|ref|NP_276438.1| - 5.4e-72 241.6 0.0 9.9e-72 240.7 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|15679321|ref|NP_276438.1| - 6.7e-31 106.8 4.4 2.6e-30 104.9 3.1 2.5 3 0 0 3 3 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|15679321|ref|NP_276438.1| - 4.7e-19 68.4 2.9 6.1e-19 68.0 0.4 2.5 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain AAA_28 PF13521.6 gi|15679321|ref|NP_276438.1| - 4.3e-05 23.8 0.1 0.006 16.8 0.0 3.1 3 0 0 3 3 3 1 AAA domain CbiA PF01656.23 gi|15679321|ref|NP_276438.1| - 0.00024 21.2 0.0 0.00046 20.3 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 gi|15679321|ref|NP_276438.1| - 0.00024 21.5 0.2 0.00051 20.5 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.6 gi|15679321|ref|NP_276438.1| - 0.00093 19.6 0.1 0.00093 19.6 0.1 3.1 4 0 0 4 4 4 1 AAA domain AAA_33 PF13671.6 gi|15679321|ref|NP_276438.1| - 0.0012 19.0 0.0 0.0028 17.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain MobB PF03205.14 gi|15679321|ref|NP_276438.1| - 0.0016 18.3 0.1 0.0038 17.1 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|15679321|ref|NP_276438.1| - 0.0017 18.9 0.1 0.0076 16.8 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|15679321|ref|NP_276438.1| - 0.0018 18.0 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|15679321|ref|NP_276438.1| - 0.0024 17.8 0.8 0.01 15.8 0.1 2.3 2 0 0 2 2 2 1 NTPase ATP_bind_1 PF03029.17 gi|15679321|ref|NP_276438.1| - 0.0027 17.5 0.1 0.016 15.0 0.0 2.3 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein Arf PF00025.21 gi|15679321|ref|NP_276438.1| - 0.0031 17.0 0.1 0.0076 15.7 0.1 1.6 1 0 0 1 1 1 1 ADP-ribosylation factor family RNA_helicase PF00910.22 gi|15679321|ref|NP_276438.1| - 0.0033 17.8 0.0 0.066 13.6 0.0 2.3 1 1 0 1 1 1 1 RNA helicase MeaB PF03308.16 gi|15679321|ref|NP_276438.1| - 0.0045 16.0 0.5 0.017 14.1 0.0 2.1 3 0 0 3 3 3 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|15679321|ref|NP_276438.1| - 0.0062 16.6 0.2 0.028 14.5 0.2 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|15679321|ref|NP_276438.1| - 0.01 15.1 0.0 0.024 13.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin ResIII PF04851.15 gi|15679321|ref|NP_276438.1| - 0.01 15.8 0.1 0.025 14.6 0.1 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit G-alpha PF00503.20 gi|15679321|ref|NP_276438.1| - 0.011 14.9 0.1 0.041 13.0 0.0 2.0 2 1 0 2 2 2 0 G-protein alpha subunit 6PF2K PF01591.18 gi|15679321|ref|NP_276438.1| - 0.012 14.9 0.0 0.025 13.9 0.0 1.5 1 0 0 1 1 1 0 6-phosphofructo-2-kinase APS_kinase PF01583.20 gi|15679321|ref|NP_276438.1| - 0.022 14.6 0.0 0.046 13.6 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase MipZ PF09140.11 gi|15679321|ref|NP_276438.1| - 0.025 13.8 0.4 0.93 8.7 0.4 2.4 1 1 0 1 1 1 0 ATPase MipZ LpxK PF02606.14 gi|15679321|ref|NP_276438.1| - 0.026 13.7 0.1 0.11 11.6 0.1 1.9 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_5 PF07728.14 gi|15679321|ref|NP_276438.1| - 0.037 14.0 0.6 0.13 12.2 0.0 2.4 3 1 1 4 4 3 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|15679321|ref|NP_276438.1| - 0.045 13.3 2.4 1.2 8.7 2.4 2.3 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain KTI12 PF08433.10 gi|15679321|ref|NP_276438.1| - 0.11 11.9 0.0 0.24 10.8 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_7 PF12775.7 gi|15679321|ref|NP_276438.1| - 0.12 11.8 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PFOR_II PF17147.4 gi|15679321|ref|NP_276438.1| - 0.13 12.6 0.1 1.6 9.0 0.0 2.7 3 0 0 3 3 2 0 Pyruvate:ferredoxin oxidoreductase core domain II PC_rep PF01851.22 gi|15679321|ref|NP_276438.1| - 0.13 12.7 0.0 18 6.0 0.0 3.2 3 0 0 3 3 2 0 Proteasome/cyclosome repeat Glyco_transf_4 PF13439.6 gi|15679321|ref|NP_276438.1| - 0.16 11.9 0.0 0.32 11.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Thymidylate_kin PF02223.17 gi|15679321|ref|NP_276438.1| - 0.4 10.3 4.3 0.43 10.2 0.2 2.7 3 0 0 3 3 3 0 Thymidylate kinase THUMP PF02926.17 gi|15679322|ref|NP_276439.1| - 5.2e-19 68.8 0.0 1.2e-18 67.6 0.0 1.6 1 0 0 1 1 1 1 THUMP domain Ribosomal_L21e PF01157.18 gi|15679323|ref|NP_276440.1| - 1.4e-31 108.3 2.6 1.6e-31 108.2 2.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|15679324|ref|NP_276441.1| - 1.8e-08 34.8 0.1 3.1e-08 34.0 0.1 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb4 FNIP_C PF14638.6 gi|15679324|ref|NP_276441.1| - 0.0047 16.6 0.1 0.0063 16.2 0.1 1.2 1 0 0 1 1 1 1 Folliculin-interacting protein C-terminus NIR_SIR_ferr PF03460.17 gi|15679324|ref|NP_276441.1| - 0.0058 16.5 0.1 0.052 13.4 0.0 2.4 2 1 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain FliG_N PF14842.6 gi|15679324|ref|NP_276441.1| - 0.057 14.0 0.5 6.9 7.3 0.1 2.1 1 1 1 2 2 2 0 FliG N-terminal domain DUF655 PF04919.12 gi|15679325|ref|NP_276442.1| - 1.9e-81 272.4 0.3 2.1e-81 272.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|15679325|ref|NP_276442.1| - 0.00054 20.2 0.0 0.00085 19.5 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|15679325|ref|NP_276442.1| - 0.0053 17.0 0.0 0.0096 16.2 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|15679326|ref|NP_276443.1| - 1.2e-51 175.3 0.0 1.3e-51 175.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|15679326|ref|NP_276443.1| - 8.5e-06 26.4 0.0 1.9e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15679326|ref|NP_276443.1| - 0.00022 21.1 0.0 0.00034 20.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 gi|15679326|ref|NP_276443.1| - 0.0026 18.4 0.0 0.0066 17.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15679326|ref|NP_276443.1| - 0.003 17.4 0.0 0.0049 16.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15679326|ref|NP_276443.1| - 0.0042 16.8 0.0 0.006 16.3 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein SAM_MT PF04445.13 gi|15679326|ref|NP_276443.1| - 0.016 14.6 0.0 0.026 13.9 0.0 1.3 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase MTS PF05175.14 gi|15679326|ref|NP_276443.1| - 0.017 14.7 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|15679326|ref|NP_276443.1| - 0.081 12.7 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|15679326|ref|NP_276443.1| - 0.19 11.2 0.0 0.33 10.4 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase DUF2244 PF10003.9 gi|15679327|ref|NP_276444.1| - 0.046 13.4 2.3 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DUF3043 PF11241.8 gi|15679327|ref|NP_276444.1| - 0.28 11.2 4.3 5.2 7.1 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) HTH_3 PF01381.22 gi|15679328|ref|NP_276445.1| - 9.1e-18 64.1 0.3 1e-17 63.9 0.3 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|15679328|ref|NP_276445.1| - 3.8e-12 46.0 0.2 4.2e-12 45.9 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|15679328|ref|NP_276445.1| - 2e-11 44.1 1.1 2.3e-11 43.9 1.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|15679328|ref|NP_276445.1| - 5.7e-06 26.1 1.6 1.5e-05 24.8 1.6 1.7 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15679328|ref|NP_276445.1| - 4.2e-05 23.5 0.5 9.9e-05 22.2 0.2 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|15679328|ref|NP_276445.1| - 0.0003 21.2 0.0 0.00036 20.9 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.12 gi|15679328|ref|NP_276445.1| - 0.00066 19.6 0.2 0.0013 18.6 0.2 1.5 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 gi|15679328|ref|NP_276445.1| - 0.00093 18.9 0.8 0.0062 16.3 0.1 2.0 2 0 0 2 2 2 1 Homeodomain-like domain HTH_37 PF13744.6 gi|15679328|ref|NP_276445.1| - 0.00099 19.0 0.1 0.0011 18.8 0.1 1.3 1 1 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|15679328|ref|NP_276445.1| - 0.0013 18.2 0.7 0.0013 18.2 0.7 1.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|15679328|ref|NP_276445.1| - 0.0021 17.6 0.0 0.0043 16.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 gi|15679328|ref|NP_276445.1| - 0.0038 17.0 1.9 0.28 11.0 0.1 2.4 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|15679328|ref|NP_276445.1| - 0.017 14.9 0.7 0.056 13.3 0.1 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|15679328|ref|NP_276445.1| - 0.02 14.7 0.0 0.025 14.4 0.0 1.4 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MarR_2 PF12802.7 gi|15679328|ref|NP_276445.1| - 0.022 14.7 0.2 0.082 12.8 0.1 1.8 2 0 0 2 2 2 0 MarR family MerR PF00376.23 gi|15679328|ref|NP_276445.1| - 0.024 14.4 0.0 0.052 13.3 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein MqsA_antitoxin PF15731.5 gi|15679328|ref|NP_276445.1| - 0.024 14.7 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Sigma70_r4_2 PF08281.12 gi|15679328|ref|NP_276445.1| - 0.039 13.6 0.4 0.095 12.4 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 DUF896 PF05979.12 gi|15679328|ref|NP_276445.1| - 0.062 13.2 0.1 2.9 7.8 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF896) HTH_7 PF02796.15 gi|15679328|ref|NP_276445.1| - 0.084 13.0 0.1 0.29 11.3 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MTS PF05175.14 gi|15679329|ref|NP_276446.1| - 1.4e-17 63.8 0.0 2.9e-14 53.0 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase small domain PrmA PF06325.13 gi|15679329|ref|NP_276446.1| - 4.4e-11 42.7 0.2 1.5e-10 41.0 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|15679329|ref|NP_276446.1| - 1e-10 42.2 0.1 3.2e-09 37.4 0.0 2.4 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15679329|ref|NP_276446.1| - 7.6e-10 38.8 0.0 1.1e-09 38.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15679329|ref|NP_276446.1| - 2.2e-08 34.6 0.1 1.8e-07 31.7 0.1 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15679329|ref|NP_276446.1| - 2.8e-07 31.2 0.0 3.5e-06 27.7 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15679329|ref|NP_276446.1| - 9.9e-06 25.4 0.0 1.4e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|15679329|ref|NP_276446.1| - 1.3e-05 25.1 0.0 9.2e-05 22.3 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|15679329|ref|NP_276446.1| - 0.00011 22.0 0.1 0.00023 21.0 0.0 1.5 2 0 0 2 2 2 1 Lysine methyltransferase CMAS PF02353.20 gi|15679329|ref|NP_276446.1| - 0.00049 19.5 0.0 0.0018 17.6 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase TRM PF02005.16 gi|15679329|ref|NP_276446.1| - 0.00054 19.2 0.0 0.0039 16.4 0.0 1.9 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase UPF0020 PF01170.18 gi|15679329|ref|NP_276446.1| - 0.0027 17.4 0.0 0.012 15.4 0.0 1.8 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.10 gi|15679329|ref|NP_276446.1| - 0.0091 15.6 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_8 PF05148.15 gi|15679329|ref|NP_276446.1| - 0.0094 15.8 0.0 0.22 11.3 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_18 PF12847.7 gi|15679329|ref|NP_276446.1| - 0.012 15.5 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|15679329|ref|NP_276446.1| - 0.025 14.3 0.0 0.048 13.4 0.0 1.5 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 gi|15679329|ref|NP_276446.1| - 0.03 14.0 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 gi|15679329|ref|NP_276446.1| - 0.041 13.2 0.1 0.27 10.6 0.1 2.0 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family UPF0146 PF03686.13 gi|15679329|ref|NP_276446.1| - 0.11 12.3 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Methyltransf_3 PF01596.17 gi|15679329|ref|NP_276446.1| - 0.13 11.4 0.0 0.19 10.9 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Peptidase_C39 PF03412.15 gi|15679330|ref|NP_276447.1| - 1.5e-33 115.4 0.0 3.9e-33 114.1 0.0 1.7 2 0 0 2 2 2 1 Peptidase C39 family Peptidase_C39_2 PF13529.6 gi|15679330|ref|NP_276447.1| - 9.7e-05 22.9 4.7 0.008 16.7 0.0 3.2 2 1 1 3 3 3 2 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|15679330|ref|NP_276447.1| - 0.00024 21.1 0.6 0.0036 17.3 0.1 2.7 1 1 1 2 2 2 1 Papain-like cysteine protease AvrRpt2 DUF3335 PF11814.8 gi|15679330|ref|NP_276447.1| - 0.0044 16.5 0.1 0.056 12.9 0.0 2.3 1 1 0 2 2 2 1 Peptidase_C39 like family PTS_EIIC PF02378.18 gi|15679331|ref|NP_276448.1| - 0.0097 15.0 10.9 0.0097 15.0 10.9 1.9 1 1 1 2 2 2 1 Phosphotransferase system, EIIC DUF373 PF04123.13 gi|15679331|ref|NP_276448.1| - 0.021 14.3 8.5 0.033 13.6 8.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) Lip_A_acyltrans PF03279.13 gi|15679331|ref|NP_276448.1| - 0.2 10.8 1.4 3.3 6.8 0.1 2.0 2 0 0 2 2 2 0 Bacterial lipid A biosynthesis acyltransferase Cyt_bd_oxida_II PF02322.15 gi|15679331|ref|NP_276448.1| - 0.33 10.3 10.8 0.38 10.1 10.8 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II CPP1-like PF11833.8 gi|15679331|ref|NP_276448.1| - 1.5 8.4 11.6 1.9 8.1 11.6 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Peptidase_C39 PF03412.15 gi|15679332|ref|NP_276449.1| - 7.4e-12 45.2 0.1 2.4e-11 43.5 0.0 1.7 2 0 0 2 2 2 1 Peptidase C39 family Peptidase_C70 PF12385.8 gi|15679332|ref|NP_276449.1| - 0.0011 18.9 0.4 0.0059 16.6 0.0 2.1 1 1 1 2 2 2 1 Papain-like cysteine protease AvrRpt2 Linker_histone PF00538.19 gi|15679333|ref|NP_276450.1| - 0.092 13.1 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 linker histone H1 and H5 family DAP_epimerase PF01678.19 gi|15679334|ref|NP_276451.1| - 3.9e-73 243.3 0.9 2.8e-39 134.0 0.4 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.16 gi|15679334|ref|NP_276451.1| - 0.00017 21.1 0.0 0.00039 20.0 0.0 1.5 2 0 0 2 2 2 1 Phenazine biosynthesis-like protein Pro_racemase PF05544.11 gi|15679334|ref|NP_276451.1| - 0.00044 19.4 0.1 0.00094 18.3 0.0 1.5 2 0 0 2 2 2 1 Proline racemase Orn_Arg_deC_N PF02784.16 gi|15679335|ref|NP_276452.1| - 3e-55 187.3 0.0 3.9e-55 186.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|15679335|ref|NP_276452.1| - 1.4e-27 95.8 0.0 1.6e-27 95.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 gi|15679335|ref|NP_276452.1| - 5.9e-05 22.8 0.0 0.00011 21.9 0.0 1.4 1 1 0 1 1 1 1 Alanine racemase, N-terminal domain NUDIX PF00293.28 gi|15679336|ref|NP_276453.1| - 8e-20 71.2 0.1 9e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|15679336|ref|NP_276453.1| - 1.9e-05 24.6 0.0 2.5e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Aminotran_3 PF00202.21 gi|15679337|ref|NP_276454.1| - 1.6e-120 402.5 0.3 1.8e-120 402.3 0.3 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|15679337|ref|NP_276454.1| - 4.2e-06 26.2 0.0 6.1e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15679337|ref|NP_276454.1| - 3.7e-05 22.9 0.0 6e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Gloverin PF10793.9 gi|15679337|ref|NP_276454.1| - 0.12 12.2 0.3 4 7.3 0.0 2.9 3 0 0 3 3 3 0 Gloverin-like protein Pro_isomerase PF00160.21 gi|15679338|ref|NP_276455.1| - 1.1e-45 155.8 0.0 1.2e-45 155.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GAF_2 PF13185.6 gi|15679339|ref|NP_276456.1| - 7.9e-20 71.6 0.0 8.9e-20 71.4 0.0 1.0 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|15679339|ref|NP_276456.1| - 1e-05 26.2 0.0 1.1e-05 26.0 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|15679339|ref|NP_276456.1| - 0.071 13.5 0.0 0.55 10.6 0.0 1.9 2 0 0 2 2 2 0 GAF domain DUF4459 PF14673.6 gi|15679339|ref|NP_276456.1| - 0.14 12.1 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) HhH-GPD PF00730.25 gi|15679342|ref|NP_276459.1| - 8.1e-27 93.8 0.0 1.2e-26 93.3 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 gi|15679342|ref|NP_276459.1| - 1.6e-06 28.2 0.0 4e-06 26.9 0.0 1.7 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HHH PF00633.23 gi|15679342|ref|NP_276459.1| - 3e-06 26.8 0.0 8.5e-06 25.4 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15679342|ref|NP_276459.1| - 0.14 12.8 0.0 0.44 11.2 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain His_biosynth PF00977.21 gi|15679343|ref|NP_276460.1| - 1.6e-85 286.2 0.0 2e-85 285.9 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 gi|15679343|ref|NP_276460.1| - 3.6e-09 36.3 0.0 0.00012 21.5 0.0 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 gi|15679343|ref|NP_276460.1| - 3.8e-06 26.4 0.0 0.0047 16.4 0.0 2.3 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator NMO PF03060.15 gi|15679343|ref|NP_276460.1| - 5.6e-06 26.0 0.0 0.0026 17.2 0.0 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase DHO_dh PF01180.21 gi|15679343|ref|NP_276460.1| - 0.0001 21.6 0.0 0.047 12.9 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|15679343|ref|NP_276460.1| - 0.00037 19.6 0.1 0.55 9.2 0.0 2.3 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain Dus PF01207.17 gi|15679343|ref|NP_276460.1| - 0.0014 17.8 0.0 0.032 13.3 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) PcrB PF01884.17 gi|15679343|ref|NP_276460.1| - 0.023 14.2 0.0 0.076 12.5 0.0 1.9 2 0 0 2 2 2 0 PcrB family FMN_dh PF01070.18 gi|15679343|ref|NP_276460.1| - 0.059 12.4 0.0 0.4 9.6 0.0 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase DUF561 PF04481.12 gi|15679343|ref|NP_276460.1| - 0.12 11.5 0.1 7.1 5.7 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF561) FmdE PF02663.14 gi|15679344|ref|NP_276461.1| - 2.3e-37 128.0 0.1 3.4e-37 127.4 0.1 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|15679344|ref|NP_276461.1| - 8.5e-11 41.6 3.5 1.4e-10 40.9 3.5 1.4 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.22 gi|15679344|ref|NP_276461.1| - 0.018 15.2 0.1 0.039 14.2 0.1 1.5 1 0 0 1 1 1 0 LIM domain OrfB_Zn_ribbon PF07282.11 gi|15679344|ref|NP_276461.1| - 0.046 13.6 0.2 0.09 12.7 0.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain FmdE PF02663.14 gi|15679345|ref|NP_276462.1| - 8.2e-35 119.7 0.0 2.1e-20 73.1 0.0 2.9 3 0 0 3 3 3 2 FmdE, Molybdenum formylmethanofuran dehydrogenase operon HTH_AraC PF00165.23 gi|15679345|ref|NP_276462.1| - 0.048 13.8 0.0 3.2 8.0 0.0 2.7 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family Helicase_C_2 PF13307.6 gi|15679346|ref|NP_276463.1| - 7.2e-17 62.1 0.1 2.7e-16 60.2 0.1 1.9 1 1 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.15 gi|15679346|ref|NP_276463.1| - 8.6e-08 32.4 0.0 1.6e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 gi|15679346|ref|NP_276463.1| - 1.3e-05 24.9 0.0 2.3e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 gi|15679346|ref|NP_276463.1| - 0.0034 17.2 0.2 1.8 8.3 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase FliG_C PF01706.16 gi|15679346|ref|NP_276463.1| - 0.02 15.1 0.2 0.072 13.3 0.1 1.9 2 0 0 2 2 2 0 FliG C-terminal domain Helicase_C PF00271.31 gi|15679346|ref|NP_276463.1| - 0.04 14.3 0.0 0.085 13.2 0.0 1.6 1 0 0 1 1 1 0 Helicase conserved C-terminal domain AAA_30 PF13604.6 gi|15679346|ref|NP_276463.1| - 0.05 13.3 0.0 1.7 8.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain Stealth_CR4 PF17103.5 gi|15679346|ref|NP_276463.1| - 0.058 13.3 0.3 0.2 11.6 0.3 1.9 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 PhoH PF02562.16 gi|15679346|ref|NP_276463.1| - 0.22 10.9 0.1 6.9 6.1 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein TP_methylase PF00590.20 gi|15679347|ref|NP_276464.1| - 2.4e-50 171.5 0.1 2.9e-50 171.2 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases V4R PF02830.18 gi|15679348|ref|NP_276465.1| - 2e-18 66.1 1.6 3.3e-18 65.4 1.6 1.4 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.20 gi|15679348|ref|NP_276465.1| - 4.2e-12 45.7 0.4 8.8e-12 44.7 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|15679348|ref|NP_276465.1| - 3.1e-09 36.6 0.0 5.9e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15679348|ref|NP_276465.1| - 1.4e-06 28.7 0.1 3.3e-06 27.5 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|15679348|ref|NP_276465.1| - 3.6e-06 27.0 0.0 8.3e-06 25.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|15679348|ref|NP_276465.1| - 7.1e-06 25.5 0.1 2.2e-05 23.9 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|15679348|ref|NP_276465.1| - 1.5e-05 24.8 0.2 2.7e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|15679348|ref|NP_276465.1| - 0.0013 18.5 0.0 0.0026 17.5 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|15679348|ref|NP_276465.1| - 0.0038 17.1 0.3 0.011 15.6 0.3 1.7 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|15679348|ref|NP_276465.1| - 0.0041 17.0 0.0 0.0084 16.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|15679348|ref|NP_276465.1| - 0.0068 16.2 0.1 0.026 14.3 0.1 2.0 2 1 0 2 2 2 1 HxlR-like helix-turn-helix HTH_40 PF14493.6 gi|15679348|ref|NP_276465.1| - 0.024 15.1 0.1 0.061 13.8 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|15679348|ref|NP_276465.1| - 0.029 14.3 0.1 0.058 13.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|15679348|ref|NP_276465.1| - 0.031 14.6 0.1 0.061 13.7 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|15679348|ref|NP_276465.1| - 0.052 13.8 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain RP-C PF03428.13 gi|15679348|ref|NP_276465.1| - 0.056 13.1 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_Crp_2 PF13545.6 gi|15679348|ref|NP_276465.1| - 0.063 13.3 0.1 0.19 11.7 0.1 1.9 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15679348|ref|NP_276465.1| - 0.075 12.7 0.1 0.27 11.0 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_38 PF13936.6 gi|15679348|ref|NP_276465.1| - 0.098 12.4 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.14 gi|15679348|ref|NP_276465.1| - 0.099 12.6 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_46 PF15977.5 gi|15679348|ref|NP_276465.1| - 0.15 12.1 0.7 1.1 9.3 0.1 2.2 1 1 1 2 2 2 0 Winged helix-turn-helix DNA binding Flavodoxin_1 PF00258.25 gi|15679349|ref|NP_276466.1| - 4.7e-11 43.1 0.0 3.9e-10 40.1 0.0 2.1 2 0 0 2 2 2 1 Flavodoxin Lactamase_B PF00753.27 gi|15679349|ref|NP_276466.1| - 3.4e-07 30.5 0.1 7.5e-07 29.4 0.1 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily PGM_PMM_I PF02878.16 gi|15679349|ref|NP_276466.1| - 0.015 15.0 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Rubrerythrin PF02915.17 gi|15679350|ref|NP_276467.1| - 8.6e-19 68.3 5.4 5.9e-18 65.6 5.4 1.8 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|15679350|ref|NP_276467.1| - 9.8e-08 32.0 2.0 6.9e-06 26.1 2.0 2.1 1 1 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.12 gi|15679350|ref|NP_276467.1| - 0.016 15.2 0.8 0.31 11.0 0.3 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF892) Rubredoxin PF00301.20 gi|15679351|ref|NP_276468.1| - 0.0003 20.8 2.1 0.0056 16.7 2.1 2.4 1 1 0 1 1 1 1 Rubredoxin DUF4428 PF14471.6 gi|15679351|ref|NP_276468.1| - 0.016 15.1 0.4 0.029 14.3 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) OrfB_Zn_ribbon PF07282.11 gi|15679351|ref|NP_276468.1| - 0.018 14.9 0.3 0.035 14.0 0.3 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Strep_his_triad PF04270.13 gi|15679351|ref|NP_276468.1| - 0.083 12.9 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 Streptococcal histidine triad protein zf_UBZ PF18439.1 gi|15679351|ref|NP_276468.1| - 0.21 11.2 1.0 7.7 6.2 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger NRDD PF13597.6 gi|15679351|ref|NP_276468.1| - 1.3 7.8 3.6 2.3 6.9 0.4 2.0 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase UPF0547 PF10571.9 gi|15679351|ref|NP_276468.1| - 4.6 7.4 7.2 7.8 6.7 0.1 3.1 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 NAD_binding_2 PF03446.15 gi|15679352|ref|NP_276469.1| - 0.12 12.5 0.0 2 8.6 0.1 2.5 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|15679353|ref|NP_276470.1| - 2.1e-61 207.8 2.1 2.8e-61 207.3 2.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15679353|ref|NP_276470.1| - 7.2e-27 93.8 3.8 6.7e-20 71.4 0.6 3.6 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15679353|ref|NP_276470.1| - 2.5e-16 59.8 0.0 5.7e-09 35.7 0.0 2.5 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15679353|ref|NP_276470.1| - 4e-16 59.2 0.0 1.2e-15 57.8 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.24 gi|15679353|ref|NP_276470.1| - 5.3e-11 42.7 7.1 0.028 14.0 0.9 4.2 4 0 0 4 4 4 4 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15679353|ref|NP_276470.1| - 3.5e-09 36.7 0.3 0.0037 17.5 0.1 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 gi|15679353|ref|NP_276470.1| - 8.2e-08 31.8 0.0 0.0002 20.6 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 gi|15679353|ref|NP_276470.1| - 1.2e-06 28.9 1.2 0.0058 17.0 0.1 2.9 2 1 1 3 3 3 2 Putative NAD(P)-binding HI0933_like PF03486.14 gi|15679353|ref|NP_276470.1| - 1.7e-06 27.0 0.2 0.4 9.3 0.1 4.6 5 0 0 5 5 5 2 HI0933-like protein Thi4 PF01946.17 gi|15679353|ref|NP_276470.1| - 7.4e-06 25.4 0.3 0.0068 15.7 0.0 2.8 3 0 0 3 3 3 2 Thi4 family FAD_binding_2 PF00890.24 gi|15679353|ref|NP_276470.1| - 2.7e-05 23.4 7.5 0.08 12.0 0.0 4.2 3 1 1 4 4 4 2 FAD binding domain NAD_binding_9 PF13454.6 gi|15679353|ref|NP_276470.1| - 4.2e-05 23.6 5.0 0.79 9.7 0.0 4.1 3 1 1 4 4 4 2 FAD-NAD(P)-binding GIDA PF01134.22 gi|15679353|ref|NP_276470.1| - 7e-05 22.1 4.0 0.067 12.3 0.2 4.0 3 1 1 4 4 4 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|15679353|ref|NP_276470.1| - 0.00054 18.9 0.2 0.37 9.6 0.0 2.4 2 0 0 2 2 2 2 Tryptophan halogenase 3HCDH_N PF02737.18 gi|15679353|ref|NP_276470.1| - 0.0034 17.3 1.2 0.0042 17.0 0.2 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|15679353|ref|NP_276470.1| - 0.0075 15.5 1.1 2.6 7.2 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|15679353|ref|NP_276470.1| - 0.01 15.2 6.6 0.26 10.6 0.1 3.6 3 1 1 4 4 4 0 FAD dependent oxidoreductase TrkA_N PF02254.18 gi|15679353|ref|NP_276470.1| - 0.017 15.4 0.9 9.1 6.6 0.1 2.9 2 1 0 2 2 2 0 TrkA-N domain Lycopene_cycl PF05834.12 gi|15679353|ref|NP_276470.1| - 0.033 13.2 3.4 3.8 6.5 0.0 2.9 3 0 0 3 3 3 0 Lycopene cyclase protein ApbA PF02558.16 gi|15679353|ref|NP_276470.1| - 0.035 13.7 1.6 6.9 6.3 0.3 3.2 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 gi|15679353|ref|NP_276470.1| - 0.038 13.3 2.6 0.34 10.2 0.3 2.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain SH3_7 PF12914.7 gi|15679353|ref|NP_276470.1| - 0.16 12.2 0.1 31 4.9 0.0 2.6 2 0 0 2 2 2 0 SH3 domain of SH3b2 type ThiF PF00899.21 gi|15679353|ref|NP_276470.1| - 0.96 8.8 3.1 0.52 9.6 0.1 2.0 2 0 0 2 2 2 0 ThiF family LMWPc PF01451.21 gi|15679354|ref|NP_276471.1| - 5.2e-20 72.3 0.0 1.2e-19 71.0 0.0 1.5 1 1 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase DUF166 PF02593.14 gi|15679355|ref|NP_276472.1| - 1.6e-70 237.1 0.0 1.8e-70 237.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DrsE PF02635.15 gi|15679356|ref|NP_276473.1| - 9e-26 90.5 0.0 1e-25 90.4 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE PF02635.15 gi|15679357|ref|NP_276474.1| - 1.3e-11 44.9 0.0 1.6e-11 44.6 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.12 gi|15679357|ref|NP_276474.1| - 8.7e-06 25.8 0.2 2.4e-05 24.4 0.2 1.6 1 1 0 1 1 1 1 DsrH like protein Molydop_binding PF01568.21 gi|15679357|ref|NP_276474.1| - 0.12 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain FeS PF04060.13 gi|15679358|ref|NP_276475.1| - 4.5e-15 55.0 2.6 7.1e-15 54.4 2.6 1.3 1 0 0 1 1 1 1 Putative Fe-S cluster DsrH PF04077.12 gi|15679359|ref|NP_276476.1| - 5.8e-21 74.4 0.0 6.7e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 DsrH like protein FeoB_N PF02421.18 gi|15679360|ref|NP_276477.1| - 9.1e-62 207.2 0.1 1.6e-61 206.4 0.1 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|15679360|ref|NP_276477.1| - 4.5e-44 149.3 15.9 2.4e-30 105.1 5.0 2.7 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|15679360|ref|NP_276477.1| - 3.3e-19 69.1 0.0 6.6e-19 68.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|15679360|ref|NP_276477.1| - 1.9e-16 59.5 2.5 1.9e-16 59.5 2.5 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|15679360|ref|NP_276477.1| - 5.3e-13 49.3 0.8 1.1e-12 48.3 0.8 1.5 1 0 0 1 1 1 1 FeoB cytosolic helical domain Dynamin_N PF00350.23 gi|15679360|ref|NP_276477.1| - 0.0014 18.7 0.1 0.83 9.7 0.0 2.4 1 1 1 2 2 2 2 Dynamin family Asp4 PF16996.5 gi|15679360|ref|NP_276477.1| - 0.12 12.2 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 SRPRB PF09439.10 gi|15679360|ref|NP_276477.1| - 0.13 11.7 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit FeoA PF04023.14 gi|15679361|ref|NP_276478.1| - 2.8e-17 62.7 0.2 3e-17 62.6 0.2 1.0 1 0 0 1 1 1 1 FeoA domain Glyco_hydro_65C PF03633.15 gi|15679361|ref|NP_276478.1| - 0.029 14.3 0.0 0.23 11.4 0.0 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain DUF2993 PF11209.8 gi|15679361|ref|NP_276478.1| - 0.042 14.1 0.1 0.1 12.8 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2993) CobN-Mg_chel PF02514.16 gi|15679362|ref|NP_276479.1| - 0 1112.2 0.0 3.5e-170 568.1 0.0 2.0 1 1 1 2 2 2 2 CobN/Magnesium Chelatase NdhN PF11909.8 gi|15679362|ref|NP_276479.1| - 0.075 12.7 0.1 9.5 5.9 0.0 3.0 3 0 0 3 3 3 0 NADH-quinone oxidoreductase cyanobacterial subunit N DUF169 PF02596.15 gi|15679363|ref|NP_276480.1| - 1.6e-49 168.7 0.0 1.8e-49 168.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Fer4_7 PF12838.7 gi|15679364|ref|NP_276481.1| - 5.5e-05 23.7 9.7 0.054 14.1 1.4 2.3 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15679364|ref|NP_276481.1| - 5.8e-05 22.7 15.4 0.00053 19.7 3.9 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679364|ref|NP_276481.1| - 0.00013 21.9 13.0 0.0021 18.1 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679364|ref|NP_276481.1| - 0.00076 19.4 13.2 0.0063 16.5 2.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679364|ref|NP_276481.1| - 0.0036 17.4 13.3 0.0056 16.8 13.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679364|ref|NP_276481.1| - 0.0091 16.1 11.6 0.043 14.0 12.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679364|ref|NP_276481.1| - 0.079 13.1 13.2 1 9.5 14.1 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679364|ref|NP_276481.1| - 0.08 13.5 0.9 0.08 13.5 0.9 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I CS PF04969.16 gi|15679365|ref|NP_276482.1| - 0.016 16.2 0.0 0.019 16.0 0.0 1.1 1 0 0 1 1 1 0 CS domain HSP20 PF00011.21 gi|15679365|ref|NP_276482.1| - 0.097 12.8 0.0 0.12 12.6 0.0 1.3 1 1 0 1 1 1 0 Hsp20/alpha crystallin family zf-ribbon_3 PF13248.6 gi|15679366|ref|NP_276483.1| - 0.0012 18.2 0.6 0.0024 17.2 0.6 1.5 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15679366|ref|NP_276483.1| - 0.035 13.6 2.3 0.05 13.1 2.3 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding COPI_C PF06957.11 gi|15679366|ref|NP_276483.1| - 0.13 11.0 0.1 0.16 10.7 0.1 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Auto_anti-p27 PF06677.12 gi|15679366|ref|NP_276483.1| - 0.32 11.2 9.1 0.27 11.4 4.0 2.1 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Peptidase_M50 PF02163.22 gi|15679367|ref|NP_276484.1| - 3.6e-26 92.0 0.3 4e-25 88.5 0.3 2.1 1 1 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 gi|15679367|ref|NP_276484.1| - 9.8e-06 25.3 0.0 1.8e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|15679367|ref|NP_276484.1| - 3e-05 24.3 0.0 5.4e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_1 PF12812.7 gi|15679367|ref|NP_276484.1| - 0.0028 17.6 0.0 0.0054 16.7 0.0 1.4 1 0 0 1 1 1 1 PDZ-like domain PDZ_2 PF13180.6 gi|15679367|ref|NP_276484.1| - 0.0033 17.7 0.0 0.0067 16.7 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDR_CDR PF06422.12 gi|15679367|ref|NP_276484.1| - 0.074 13.0 0.7 0.074 13.0 0.7 2.8 3 0 0 3 3 3 0 CDR ABC transporter Peptidase_M36 PF02128.15 gi|15679367|ref|NP_276484.1| - 0.22 10.6 0.1 0.31 10.1 0.1 1.1 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) MoeA_N PF03453.17 gi|15679368|ref|NP_276485.1| - 6.5e-45 152.7 1.1 6.5e-45 152.7 1.1 1.8 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|15679368|ref|NP_276485.1| - 1.3e-25 89.7 0.1 2.6e-25 88.8 0.1 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|15679368|ref|NP_276485.1| - 1.2e-19 70.3 0.0 4.5e-19 68.4 0.0 2.1 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) ABC_tran PF00005.27 gi|15679369|ref|NP_276486.1| - 1.3e-30 106.7 0.0 1.7e-30 106.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679369|ref|NP_276486.1| - 2.9e-11 43.7 0.3 1.6e-05 24.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|15679369|ref|NP_276486.1| - 3.1e-09 37.4 0.0 5.2e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|15679369|ref|NP_276486.1| - 0.00062 20.3 0.0 0.00093 19.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|15679369|ref|NP_276486.1| - 0.011 15.5 0.0 0.087 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_13 PF13166.6 gi|15679369|ref|NP_276486.1| - 0.022 13.4 0.0 4 6.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|15679369|ref|NP_276486.1| - 0.031 14.0 0.1 0.067 12.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|15679369|ref|NP_276486.1| - 0.033 13.6 0.1 4.3 6.7 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|15679369|ref|NP_276486.1| - 0.051 13.2 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|15679369|ref|NP_276486.1| - 0.057 13.9 0.0 0.24 11.8 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|15679369|ref|NP_276486.1| - 0.064 13.0 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15679369|ref|NP_276486.1| - 0.071 13.5 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 gi|15679369|ref|NP_276486.1| - 0.12 11.2 0.0 5.6 5.8 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ABC2_membrane_2 PF12679.7 gi|15679370|ref|NP_276487.1| - 1.7e-19 70.2 4.7 2.4e-19 69.7 4.7 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|15679370|ref|NP_276487.1| - 2.9e-15 56.3 10.7 2.7e-14 53.0 10.7 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|15679370|ref|NP_276487.1| - 8.9e-06 25.4 10.7 8.9e-06 25.4 10.7 2.0 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|15679370|ref|NP_276487.1| - 0.00027 21.0 6.8 0.00027 21.0 6.8 2.5 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|15679371|ref|NP_276488.1| - 3.7e-26 92.0 13.7 4.8e-26 91.7 13.7 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|15679371|ref|NP_276488.1| - 9.7e-14 51.3 12.9 2e-13 50.3 12.9 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|15679371|ref|NP_276488.1| - 2.7e-10 40.0 21.8 2.7e-10 40.0 21.8 2.4 3 0 0 3 3 3 1 ABC-2 type transporter ABC2_membrane_4 PF12730.7 gi|15679371|ref|NP_276488.1| - 0.0035 17.3 15.3 0.0035 17.3 15.3 2.5 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|15679371|ref|NP_276488.1| - 2.3 7.7 24.8 0.83 9.2 20.1 2.2 2 1 0 2 2 2 0 ABC-2 family transporter protein AIRS_C PF02769.22 gi|15679373|ref|NP_276490.1| - 1.5e-55 187.6 4.5 5.8e-35 120.7 0.2 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15679373|ref|NP_276490.1| - 1.4e-47 160.3 1.7 9.6e-23 80.7 0.0 2.5 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|15679373|ref|NP_276490.1| - 2.8e-10 40.5 0.0 6.3e-10 39.4 0.0 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain tRNA-synt_1 PF00133.22 gi|15679374|ref|NP_276491.1| - 9.7e-211 701.2 0.0 1.5e-210 700.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|15679374|ref|NP_276491.1| - 6.9e-33 113.8 0.1 1.9e-32 112.3 0.1 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|15679374|ref|NP_276491.1| - 1.4e-25 89.9 1.8 1.7e-11 43.5 0.1 3.3 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|15679374|ref|NP_276491.1| - 8.7e-07 28.6 0.0 4.8e-06 26.1 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|15679374|ref|NP_276491.1| - 6.8e-06 25.7 0.0 1.6e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|15679374|ref|NP_276491.1| - 1.2e-05 24.4 0.0 6.8e-05 21.9 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (K) PilZ_2 PF16823.5 gi|15679374|ref|NP_276491.1| - 0.056 13.6 0.0 8.7 6.5 0.0 2.3 2 0 0 2 2 2 0 Atypical PilZ domain, cyclic di-GMP receptor AdoMet_Synthase PF01941.19 gi|15679375|ref|NP_276492.1| - 3e-179 595.9 2.4 3.4e-179 595.7 2.4 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) DUF192 PF02643.15 gi|15679376|ref|NP_276493.1| - 1e-18 67.3 0.0 1.3e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 HEAT_2 PF13646.6 gi|15679377|ref|NP_276494.1| - 1.5e-28 99.0 8.3 8e-16 58.2 2.4 2.1 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 gi|15679377|ref|NP_276494.1| - 8.6e-19 66.0 1.6 0.00019 21.4 0.0 4.2 4 0 0 4 4 4 4 HEAT repeat HEAT_PBS PF03130.16 gi|15679377|ref|NP_276494.1| - 1.5e-18 65.5 5.2 1.3e-06 28.5 0.1 3.4 3 0 0 3 3 3 3 PBS lyase HEAT-like repeat Cnd1 PF12717.7 gi|15679377|ref|NP_276494.1| - 1.3e-11 44.9 0.1 1.3e-06 28.5 0.0 3.2 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 gi|15679377|ref|NP_276494.1| - 1.1e-08 34.9 0.0 0.013 15.5 0.0 3.8 2 2 1 4 4 4 2 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 gi|15679377|ref|NP_276494.1| - 3.6e-07 30.6 6.3 0.007 16.9 0.7 3.4 3 0 0 3 3 3 2 HEAT-like repeat Adaptin_N PF01602.20 gi|15679377|ref|NP_276494.1| - 0.00089 17.9 0.0 0.065 11.8 0.0 2.1 1 1 0 1 1 1 1 Adaptin N terminal region Aconitase_B_N PF11791.8 gi|15679377|ref|NP_276494.1| - 0.004 17.2 0.0 0.0074 16.4 0.0 1.4 1 1 0 1 1 1 1 Aconitate B N-terminal domain Cohesin_HEAT PF12765.7 gi|15679377|ref|NP_276494.1| - 0.013 15.8 1.2 12 6.3 0.1 4.1 4 0 0 4 4 4 0 HEAT repeat associated with sister chromatid cohesion Adenyl_transf PF04439.12 gi|15679377|ref|NP_276494.1| - 0.062 12.4 0.0 0.077 12.1 0.0 1.1 1 0 0 1 1 1 0 Streptomycin adenylyltransferase IFRD PF05004.13 gi|15679377|ref|NP_276494.1| - 0.068 12.3 0.2 0.53 9.3 0.2 2.1 1 1 0 1 1 1 0 Interferon-related developmental regulator (IFRD) TetR_C_16 PF17920.1 gi|15679377|ref|NP_276494.1| - 0.075 13.3 1.2 5.2 7.3 0.3 2.4 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Flavoprotein PF02441.19 gi|15679378|ref|NP_276495.1| - 1.7e-15 57.1 0.0 2.6e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4_2 PF12797.7 gi|15679378|ref|NP_276495.1| - 6.3e-07 29.1 12.5 0.00027 20.8 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679378|ref|NP_276495.1| - 1.4e-05 25.9 6.8 0.00055 20.8 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|15679378|ref|NP_276495.1| - 1.4e-05 24.9 14.2 0.0092 16.0 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|15679378|ref|NP_276495.1| - 2.2e-05 24.1 1.6 2.2e-05 24.1 1.6 3.2 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679378|ref|NP_276495.1| - 0.00015 21.8 21.7 0.0016 18.5 1.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679378|ref|NP_276495.1| - 0.00027 21.4 3.3 0.023 15.2 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679378|ref|NP_276495.1| - 0.00035 20.7 11.9 0.0037 17.4 12.6 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679378|ref|NP_276495.1| - 0.0027 18.3 13.9 0.014 16.0 4.0 2.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679378|ref|NP_276495.1| - 0.0071 16.8 1.0 0.0071 16.8 1.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679378|ref|NP_276495.1| - 0.047 13.8 9.1 0.41 10.8 0.7 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679378|ref|NP_276495.1| - 0.053 14.0 2.3 0.053 14.0 2.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679378|ref|NP_276495.1| - 0.1 13.6 16.6 0.22 12.6 7.3 3.0 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679378|ref|NP_276495.1| - 0.85 10.4 13.0 5.5 7.8 0.2 3.7 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15679378|ref|NP_276495.1| - 4.9 8.1 7.8 5.5 7.9 3.1 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain SHMT PF00464.19 gi|15679379|ref|NP_276496.1| - 1e-82 277.9 0.0 1.3e-82 277.6 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|15679379|ref|NP_276496.1| - 3.6e-12 46.2 0.0 9.5e-12 44.8 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.13 gi|15679379|ref|NP_276496.1| - 0.00088 18.4 0.0 0.0014 17.7 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 gi|15679379|ref|NP_276496.1| - 0.0027 16.7 0.0 0.0041 16.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|15679379|ref|NP_276496.1| - 0.0089 15.3 0.0 0.017 14.4 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Pyr_redox_2 PF07992.14 gi|15679380|ref|NP_276497.1| - 2.3e-23 82.9 0.0 2.4e-22 79.5 0.0 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|15679380|ref|NP_276497.1| - 3.5e-22 77.3 39.6 1.1e-07 31.4 4.1 4.8 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679380|ref|NP_276497.1| - 1e-14 54.4 29.1 2.1e-08 34.2 7.2 4.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679380|ref|NP_276497.1| - 2.5e-14 53.6 29.1 6e-06 26.8 11.5 5.0 4 1 2 6 6 6 5 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679380|ref|NP_276497.1| - 5.8e-14 52.8 18.7 0.00082 20.3 1.2 4.9 4 0 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15679380|ref|NP_276497.1| - 6e-11 42.3 37.8 3.5e-07 30.3 10.0 4.0 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679380|ref|NP_276497.1| - 4.9e-10 38.9 39.9 1.1e-05 25.2 2.8 5.2 5 0 0 5 5 4 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679380|ref|NP_276497.1| - 1.1e-09 37.9 52.2 1.9e-05 24.6 2.8 5.4 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679380|ref|NP_276497.1| - 2.3e-08 34.1 44.4 0.0017 18.4 12.3 5.1 4 2 2 6 6 6 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679380|ref|NP_276497.1| - 5.3e-07 30.1 27.6 0.012 16.2 1.2 5.2 5 0 0 5 5 5 3 4Fe-4S dicluster domain AlaDh_PNT_C PF01262.21 gi|15679380|ref|NP_276497.1| - 6.4e-06 25.6 0.0 3.9e-05 23.1 0.0 2.2 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain Fer4_8 PF13183.6 gi|15679380|ref|NP_276497.1| - 1.4e-05 25.5 28.5 0.0072 16.7 0.8 4.9 4 1 2 6 6 5 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679380|ref|NP_276497.1| - 2.6e-05 24.9 26.9 0.0016 19.1 0.4 4.8 3 1 1 4 4 4 1 4Fe-4S single cluster domain Pyr_redox PF00070.27 gi|15679380|ref|NP_276497.1| - 3.5e-05 24.3 0.3 0.0022 18.5 0.4 3.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_4 PF12800.7 gi|15679380|ref|NP_276497.1| - 0.00013 22.1 40.4 0.0027 18.1 0.9 5.2 5 0 0 5 5 4 3 4Fe-4S binding domain FAD_binding_2 PF00890.24 gi|15679380|ref|NP_276497.1| - 0.00021 20.5 0.0 0.00031 20.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Fer4_13 PF13370.6 gi|15679380|ref|NP_276497.1| - 0.00023 21.6 31.3 0.031 14.8 1.3 4.8 5 0 0 5 5 4 3 4Fe-4S single cluster domain of Ferredoxin I DAO PF01266.24 gi|15679380|ref|NP_276497.1| - 0.00025 20.7 0.1 0.0025 17.4 0.0 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase Fer4_22 PF17179.4 gi|15679380|ref|NP_276497.1| - 0.0003 21.6 21.1 0.017 16.0 0.1 4.6 4 0 0 4 4 4 2 4Fe-4S dicluster domain GIDA PF01134.22 gi|15679380|ref|NP_276497.1| - 0.0004 19.6 0.0 0.00062 19.0 0.0 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|15679380|ref|NP_276497.1| - 0.0005 20.3 0.0 0.0011 19.2 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|15679380|ref|NP_276497.1| - 0.00066 19.1 0.2 0.0014 18.0 0.2 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|15679380|ref|NP_276497.1| - 0.0054 16.0 0.5 0.02 14.2 0.2 2.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15679380|ref|NP_276497.1| - 0.016 14.5 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain DUF4033 PF13225.6 gi|15679380|ref|NP_276497.1| - 0.027 14.4 0.0 0.027 14.4 0.0 2.4 2 1 1 3 3 1 0 Domain of unknown function (DUF4033) Fer4_3 PF12798.7 gi|15679380|ref|NP_276497.1| - 0.033 15.1 5.4 0.033 15.1 5.4 6.1 7 0 0 7 7 5 0 4Fe-4S binding domain HI0933_like PF03486.14 gi|15679380|ref|NP_276497.1| - 0.13 11.0 0.2 0.21 10.2 0.2 1.3 1 0 0 1 1 1 0 HI0933-like protein Fer4_18 PF13746.6 gi|15679380|ref|NP_276497.1| - 1.4 9.2 31.5 0.074 13.3 5.6 4.5 4 1 0 5 5 4 0 4Fe-4S dicluster domain Mem_trans PF03547.18 gi|15679381|ref|NP_276498.1| - 4.7e-34 117.4 21.9 2.6e-18 65.6 11.9 2.0 1 1 1 2 2 2 2 Membrane transport protein Phage_holin_5_2 PF16079.5 gi|15679381|ref|NP_276498.1| - 3.4 8.1 11.9 0.32 11.3 0.3 4.0 2 2 3 5 5 5 0 Phage holin family Hol44, in holin superfamily V Rad51 PF08423.11 gi|15679382|ref|NP_276499.1| - 1.5e-92 309.5 0.1 1.7e-92 309.3 0.1 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|15679382|ref|NP_276499.1| - 3.1e-14 53.1 0.1 4.6e-14 52.5 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|15679382|ref|NP_276499.1| - 2e-11 43.7 0.1 3.1e-11 43.1 0.1 1.4 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15679382|ref|NP_276499.1| - 2.3e-08 33.9 0.1 4.1e-08 33.0 0.1 1.4 1 1 0 1 1 1 1 AAA domain HHH_5 PF14520.6 gi|15679382|ref|NP_276499.1| - 4.2e-07 30.5 0.6 1.3e-06 28.9 0.6 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|15679382|ref|NP_276499.1| - 6.8e-07 29.3 2.6 1.3e-06 28.4 0.2 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif AAA_22 PF13401.6 gi|15679382|ref|NP_276499.1| - 1.1e-05 25.7 0.2 2e-05 24.9 0.2 1.3 1 0 0 1 1 1 1 AAA domain Cdd1 PF11731.8 gi|15679382|ref|NP_276499.1| - 0.00025 21.2 0.0 0.00053 20.2 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus AAA_24 PF13479.6 gi|15679382|ref|NP_276499.1| - 0.0012 18.6 0.0 0.0038 17.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain TfoX_C PF04994.13 gi|15679382|ref|NP_276499.1| - 0.0048 16.9 0.2 0.11 12.6 0.0 2.5 2 0 0 2 2 2 1 TfoX C-terminal domain CobU PF02283.16 gi|15679382|ref|NP_276499.1| - 0.0076 15.8 2.5 0.034 13.7 1.3 2.3 2 1 0 2 2 2 1 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_18 PF13238.6 gi|15679382|ref|NP_276499.1| - 0.0077 16.8 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain HHH PF00633.23 gi|15679382|ref|NP_276499.1| - 0.041 13.8 0.6 0.83 9.6 0.0 2.9 2 1 0 2 2 2 0 Helix-hairpin-helix motif PAXNEB PF05625.11 gi|15679382|ref|NP_276499.1| - 0.043 13.0 0.7 2.4 7.2 0.1 2.1 2 0 0 2 2 2 0 PAXNEB protein HHH_8 PF14716.6 gi|15679382|ref|NP_276499.1| - 0.059 13.7 0.1 3.4 8.1 0.0 3.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain IMS_HHH PF11798.8 gi|15679382|ref|NP_276499.1| - 0.078 13.3 0.0 0.29 11.5 0.0 2.1 1 0 0 1 1 1 0 IMS family HHH motif Rep_fac-A_C PF08646.10 gi|15679383|ref|NP_276500.1| - 5.3e-11 42.5 0.0 7.1e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain zf-dskA_traR PF01258.17 gi|15679383|ref|NP_276500.1| - 0.003 17.5 0.4 0.018 15.0 0.1 2.2 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger TF_Zn_Ribbon PF08271.12 gi|15679383|ref|NP_276500.1| - 0.0065 16.0 3.1 0.013 15.0 3.1 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|15679383|ref|NP_276500.1| - 0.009 15.4 2.1 0.024 14.0 2.3 1.6 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15679383|ref|NP_276500.1| - 0.017 14.8 1.8 0.028 14.1 1.8 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|15679383|ref|NP_276500.1| - 0.026 14.5 0.0 0.039 14.0 0.0 1.3 1 0 0 1 1 1 0 Double zinc ribbon CDC24_OB3 PF17244.2 gi|15679383|ref|NP_276500.1| - 0.15 11.8 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 HypA PF01155.19 gi|15679383|ref|NP_276500.1| - 0.16 12.0 0.7 1.1 9.3 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA tRNA_anti-codon PF01336.25 gi|15679384|ref|NP_276501.1| - 3e-42 142.5 12.5 3.2e-10 39.8 0.1 5.3 5 0 0 5 5 5 5 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|15679384|ref|NP_276501.1| - 2.5e-25 89.5 0.1 1.2e-06 28.4 0.1 5.3 5 0 0 5 5 5 5 Cell division control protein 24, OB domain 3 Rep_fac-A_C PF08646.10 gi|15679384|ref|NP_276501.1| - 0.0001 22.0 0.0 4.8 6.9 0.0 4.4 4 0 0 4 4 4 1 Replication factor-A C terminal domain POT1PC PF16686.5 gi|15679384|ref|NP_276501.1| - 0.00027 20.9 0.0 9.6 6.1 0.0 4.4 4 1 1 5 5 5 1 ssDNA-binding domain of telomere protection protein DUF5088 PF17008.5 gi|15679384|ref|NP_276501.1| - 0.0028 17.4 0.0 0.22 11.2 0.0 3.4 4 0 0 4 4 4 1 Domain of unknown function (DUF5088) DUF961 PF06125.11 gi|15679384|ref|NP_276501.1| - 0.0038 17.5 0.0 2.9 8.3 0.0 2.9 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF961) DUF4539 PF15072.6 gi|15679384|ref|NP_276501.1| - 0.0054 16.7 0.1 4.2 7.5 0.0 4.0 4 0 0 4 4 4 1 Domain of unknown function (DUF4539) DUF3127 PF11325.8 gi|15679384|ref|NP_276501.1| - 0.03 14.5 0.0 0.79 10.0 0.0 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3127) HIN PF02760.15 gi|15679384|ref|NP_276501.1| - 0.062 13.0 0.1 8 6.1 0.1 3.0 3 0 0 3 3 3 0 HIN-200/IF120x domain MlaD PF02470.20 gi|15679384|ref|NP_276501.1| - 0.071 13.4 0.2 0.46 10.8 0.1 2.4 2 0 0 2 2 2 0 MlaD protein Aconitase PF00330.20 gi|15679385|ref|NP_276502.1| - 2e-98 330.4 4.0 2.1e-96 323.7 4.0 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|15679385|ref|NP_276502.1| - 0.00026 19.8 0.0 0.0004 19.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Aconitase_C PF00694.19 gi|15679386|ref|NP_276503.1| - 1.5e-21 77.1 0.0 2e-21 76.7 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|15679386|ref|NP_276503.1| - 0.045 13.4 0.0 0.31 10.6 0.0 2.1 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus Iso_dh PF00180.20 gi|15679387|ref|NP_276504.1| - 3.7e-105 351.9 0.1 4.6e-105 351.6 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aminotran_5 PF00266.19 gi|15679388|ref|NP_276505.1| - 1.2e-132 442.4 0.0 1.3e-132 442.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|15679388|ref|NP_276505.1| - 1.4e-10 40.9 0.0 2.3e-08 33.6 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|15679388|ref|NP_276505.1| - 1.6e-09 37.6 0.2 2.9e-09 36.7 0.2 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|15679388|ref|NP_276505.1| - 1.9e-05 24.1 0.2 0.00058 19.2 0.0 2.1 1 1 1 2 2 2 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|15679388|ref|NP_276505.1| - 4e-05 22.3 0.1 0.00012 20.7 0.0 1.7 1 1 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DMRL_synthase PF00885.19 gi|15679389|ref|NP_276506.1| - 8.1e-34 116.5 0.4 9e-34 116.3 0.4 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DUF1743 PF08489.11 gi|15679390|ref|NP_276507.1| - 1.8e-10 40.9 0.1 2e-07 31.1 0.0 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF1743) YukD PF08817.10 gi|15679390|ref|NP_276507.1| - 0.062 14.0 0.0 0.41 11.4 0.0 2.1 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein YukD Glycos_transf_2 PF00535.26 gi|15679391|ref|NP_276508.1| - 1.6e-29 102.9 0.0 2.7e-29 102.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15679391|ref|NP_276508.1| - 1.2e-10 41.6 0.4 2.3e-10 40.7 0.4 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15679391|ref|NP_276508.1| - 1.1e-07 31.6 0.0 1.7e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|15679391|ref|NP_276508.1| - 9.4e-05 22.9 0.0 0.00021 21.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 CDC48_N PF02359.18 gi|15679391|ref|NP_276508.1| - 0.0018 18.4 0.2 0.016 15.3 0.0 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain SpoIIM PF01944.17 gi|15679391|ref|NP_276508.1| - 0.014 15.5 4.0 0.028 14.5 4.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein M MCR_beta PF02241.18 gi|15679391|ref|NP_276508.1| - 0.13 11.8 2.2 1.3 8.6 0.2 2.4 2 0 0 2 2 2 0 Methyl-coenzyme M reductase beta subunit, C-terminal domain AIRC PF00731.20 gi|15679392|ref|NP_276509.1| - 1.7e-95 316.5 0.4 1.3e-49 167.6 0.1 2.0 2 0 0 2 2 2 2 AIR carboxylase PG_isomerase_N PF18353.1 gi|15679392|ref|NP_276509.1| - 0.059 13.8 0.5 14 6.2 0.0 2.9 3 0 0 3 3 3 0 Phosphoglucose isomerase N-terminal domain UbiD PF01977.16 gi|15679393|ref|NP_276510.1| - 7.7e-106 354.4 0.5 9.1e-106 354.1 0.5 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Radical_SAM PF04055.21 gi|15679394|ref|NP_276511.1| - 1.1e-21 77.9 0.0 5.3e-21 75.7 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679394|ref|NP_276511.1| - 0.038 14.2 0.0 0.071 13.4 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain DZR PF12773.7 gi|15679394|ref|NP_276511.1| - 0.054 13.5 0.2 0.054 13.5 0.2 2.7 3 0 0 3 3 3 0 Double zinc ribbon CcmH PF03918.14 gi|15679394|ref|NP_276511.1| - 0.2 11.0 0.9 4.4 6.6 0.0 2.3 2 0 0 2 2 2 0 Cytochrome C biogenesis protein zf-ribbon_3 PF13248.6 gi|15679394|ref|NP_276511.1| - 0.25 10.8 0.1 0.25 10.8 0.1 2.5 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15679394|ref|NP_276511.1| - 3.3 7.9 7.6 1.5 9.0 0.1 3.3 4 0 0 4 4 4 0 Zinc ribbon domain AIRS PF00586.24 gi|15679395|ref|NP_276512.1| - 5.1e-21 75.1 0.0 1.1e-20 74.1 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|15679395|ref|NP_276512.1| - 4e-17 62.8 0.4 5.6e-17 62.3 0.4 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain TrbI_Ftype PF09677.10 gi|15679395|ref|NP_276512.1| - 0.023 15.0 0.0 0.04 14.2 0.0 1.4 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) CbiX PF01903.17 gi|15679396|ref|NP_276513.1| - 2.9e-33 114.4 0.7 3.8e-33 114.0 0.7 1.1 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|15679396|ref|NP_276513.1| - 1e-05 25.0 0.2 1.4e-05 24.5 0.2 1.2 1 1 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|15679396|ref|NP_276513.1| - 0.00012 21.3 0.0 0.00094 18.3 0.0 1.9 2 0 0 2 2 2 1 Ferrochelatase OB_aCoA_assoc PF01796.17 gi|15679397|ref|NP_276514.1| - 1.6e-21 76.0 0.0 2.4e-21 75.5 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|15679397|ref|NP_276514.1| - 1.7e-09 37.3 0.8 2.4e-09 36.9 0.8 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_4 PF13717.6 gi|15679397|ref|NP_276514.1| - 0.0056 16.6 2.4 0.13 12.2 0.1 2.4 2 0 0 2 2 2 1 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|15679397|ref|NP_276514.1| - 0.064 13.4 0.4 0.11 12.6 0.4 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_5 PF13719.6 gi|15679397|ref|NP_276514.1| - 0.16 11.7 2.6 3 7.7 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain TrmE_N PF10396.9 gi|15679399|ref|NP_276516.1| - 0.18 12.2 0.0 0.28 11.5 0.0 1.3 1 0 0 1 1 1 0 GTP-binding protein TrmE N-terminus MgtE PF01769.16 gi|15679400|ref|NP_276517.1| - 3e-30 105.2 27.6 7.1e-18 65.2 3.3 3.7 3 1 1 4 4 4 2 Divalent cation transporter TrkA_C PF02080.21 gi|15679401|ref|NP_276518.1| - 3.3e-15 55.7 0.1 7.1e-15 54.6 0.1 1.6 1 0 0 1 1 1 1 TrkA-C domain PhoU PF01895.19 gi|15679401|ref|NP_276518.1| - 5.7e-12 45.9 6.1 1.1e-11 45.1 6.1 1.5 1 0 0 1 1 1 1 PhoU domain TP_methylase PF00590.20 gi|15679402|ref|NP_276519.1| - 1.3e-33 116.7 0.2 1.8e-33 116.3 0.2 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases zf-like PF04071.12 gi|15679402|ref|NP_276519.1| - 3.1e-23 81.5 5.6 5e-23 80.8 5.6 1.3 1 0 0 1 1 1 1 Cysteine-rich small domain Metallophos PF00149.28 gi|15679404|ref|NP_276521.1| - 5e-16 59.8 0.4 9.7e-16 58.9 0.1 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase DNA_pol_E_B PF04042.16 gi|15679404|ref|NP_276521.1| - 1.1e-15 57.5 0.0 1.6e-15 57.0 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.7 gi|15679404|ref|NP_276521.1| - 5.1e-09 36.5 0.5 1.3e-08 35.2 0.5 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|15679404|ref|NP_276521.1| - 1.2e-06 28.4 0.3 2.4e-06 27.4 0.3 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF4539 PF15072.6 gi|15679404|ref|NP_276521.1| - 0.036 14.1 0.4 0.078 13.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4539) CDC24_OB3 PF17244.2 gi|15679404|ref|NP_276521.1| - 0.12 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Aldolase_II PF00596.21 gi|15679405|ref|NP_276522.1| - 7.9e-46 156.3 0.0 8.9e-46 156.2 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain PAAR_motif PF05488.13 gi|15679405|ref|NP_276522.1| - 1.6 8.9 4.4 82 3.5 2.7 2.9 2 1 0 2 2 2 0 PAAR motif UPF0147 PF03685.13 gi|15679406|ref|NP_276523.1| - 7.1e-35 118.9 3.8 8.3e-35 118.7 3.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) TEX13 PF15186.6 gi|15679406|ref|NP_276523.1| - 0.046 13.4 0.0 0.1 12.3 0.0 1.6 2 0 0 2 2 2 0 Testis-expressed sequence 13 protein family CbiG_N PF11760.8 gi|15679407|ref|NP_276524.1| - 1.3e-32 111.6 0.4 3.3e-32 110.3 0.3 1.7 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 gi|15679407|ref|NP_276524.1| - 2.7e-26 92.4 0.0 4.2e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CobD_Cbib PF03186.13 gi|15679408|ref|NP_276525.1| - 1.3e-92 309.9 0.2 1.6e-92 309.6 0.2 1.1 1 0 0 1 1 1 1 CobD/Cbib protein DUF2299 PF10061.9 gi|15679409|ref|NP_276526.1| - 1e-47 161.3 0.1 1.2e-47 161.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) Cdc6_C PF09079.11 gi|15679411|ref|NP_276528.1| - 1.1e-17 63.8 0.4 2.9e-17 62.4 0.4 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|15679411|ref|NP_276528.1| - 1e-10 42.0 0.0 2.1e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15679411|ref|NP_276528.1| - 8.4e-09 36.0 0.0 2.9e-08 34.3 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|15679411|ref|NP_276528.1| - 8.9e-07 29.4 0.0 1.7e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|15679411|ref|NP_276528.1| - 0.00022 20.7 0.0 0.00044 19.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial TniB protein NB-ARC PF00931.22 gi|15679411|ref|NP_276528.1| - 0.0063 15.7 0.0 0.015 14.5 0.0 1.6 2 0 0 2 2 2 1 NB-ARC domain ResIII PF04851.15 gi|15679411|ref|NP_276528.1| - 0.007 16.4 0.0 0.026 14.5 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit E2F_TDP PF02319.20 gi|15679411|ref|NP_276528.1| - 0.011 15.8 0.1 0.046 13.8 0.1 2.1 1 1 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain AAA_5 PF07728.14 gi|15679411|ref|NP_276528.1| - 0.017 15.1 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|15679411|ref|NP_276528.1| - 0.02 14.8 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF87 PF01935.17 gi|15679411|ref|NP_276528.1| - 0.038 14.1 1.3 13 5.8 0.4 3.2 2 1 0 3 3 3 0 Helicase HerA, central domain AAA_7 PF12775.7 gi|15679411|ref|NP_276528.1| - 0.056 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|15679411|ref|NP_276528.1| - 0.06 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_18 PF13238.6 gi|15679411|ref|NP_276528.1| - 0.064 13.8 0.0 0.17 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 gi|15679411|ref|NP_276528.1| - 0.068 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 gi|15679411|ref|NP_276528.1| - 0.12 12.1 1.0 0.34 10.6 1.0 1.8 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|15679411|ref|NP_276528.1| - 0.12 11.3 0.0 3 6.7 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 gi|15679411|ref|NP_276528.1| - 0.12 11.5 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TsaE PF02367.17 gi|15679411|ref|NP_276528.1| - 0.13 12.3 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Torsin PF06309.11 gi|15679411|ref|NP_276528.1| - 0.13 12.4 0.0 0.45 10.6 0.0 1.8 2 0 0 2 2 2 0 Torsin PRK PF00485.18 gi|15679411|ref|NP_276528.1| - 0.13 12.0 0.6 22 4.7 0.0 2.9 2 1 1 3 3 3 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 gi|15679411|ref|NP_276528.1| - 0.17 12.3 0.0 0.4 11.1 0.0 1.7 1 0 0 1 1 1 0 RNA helicase DEAD PF00270.29 gi|15679411|ref|NP_276528.1| - 0.26 11.1 3.3 2.5 7.8 0.4 2.4 1 1 0 2 2 2 0 DEAD/DEAH box helicase OTCace_N PF02729.21 gi|15679412|ref|NP_276529.1| - 2.4e-47 160.7 0.0 4.3e-47 159.8 0.0 1.4 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|15679412|ref|NP_276529.1| - 1.1e-26 93.8 0.0 2.3e-26 92.7 0.0 1.4 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GCD14 PF08704.10 gi|15679413|ref|NP_276530.1| - 2.3e-30 106.1 0.0 1.7e-27 96.6 0.0 2.0 1 1 1 2 2 2 2 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|15679413|ref|NP_276530.1| - 6.1e-11 42.3 0.0 8e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15679413|ref|NP_276530.1| - 1.3e-09 38.2 0.0 1.7e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|15679413|ref|NP_276530.1| - 2.5e-07 31.3 0.0 3.7e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|15679413|ref|NP_276530.1| - 3.1e-06 26.8 0.0 4.9e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|15679413|ref|NP_276530.1| - 3.8e-05 23.1 0.0 6.6e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltr_RsmB-F PF01189.17 gi|15679413|ref|NP_276530.1| - 0.00021 21.0 0.0 0.00036 20.2 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F RrnaAD PF00398.20 gi|15679413|ref|NP_276530.1| - 0.0003 19.9 0.0 0.00058 19.0 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|15679413|ref|NP_276530.1| - 0.00039 21.0 0.0 0.00062 20.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15679413|ref|NP_276530.1| - 0.00047 20.9 0.0 0.00071 20.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|15679413|ref|NP_276530.1| - 0.00082 19.3 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|15679413|ref|NP_276530.1| - 0.0054 16.2 0.0 0.0081 15.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Cons_hypoth95 PF03602.15 gi|15679413|ref|NP_276530.1| - 0.0079 15.9 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_24 PF13578.6 gi|15679413|ref|NP_276530.1| - 0.042 14.9 0.0 0.099 13.7 0.0 1.6 2 0 0 2 2 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|15679413|ref|NP_276530.1| - 0.064 13.2 0.0 0.087 12.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|15679413|ref|NP_276530.1| - 0.064 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_16 PF10294.9 gi|15679413|ref|NP_276530.1| - 0.067 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase GCD14_N PF14801.6 gi|15679413|ref|NP_276530.1| - 0.083 12.8 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit N-term Methyltransf_3 PF01596.17 gi|15679413|ref|NP_276530.1| - 0.099 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase PrmA PF06325.13 gi|15679413|ref|NP_276530.1| - 0.17 11.3 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Helicase_C PF00271.31 gi|15679414|ref|NP_276531.1| - 2.2e-27 95.6 0.2 2.1e-25 89.2 0.1 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC4 PF02732.15 gi|15679414|ref|NP_276531.1| - 3.8e-25 88.9 0.0 1e-24 87.5 0.0 1.8 1 0 0 1 1 1 1 ERCC4 domain DEAD PF00270.29 gi|15679414|ref|NP_276531.1| - 1.1e-18 67.6 0.2 4.7e-18 65.6 0.0 2.2 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|15679414|ref|NP_276531.1| - 2.3e-16 60.3 0.0 1e-15 58.2 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|15679414|ref|NP_276531.1| - 3.2e-10 40.5 0.1 1.8e-09 38.0 0.1 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|15679414|ref|NP_276531.1| - 1.9e-09 37.5 0.1 4.9e-09 36.2 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|15679414|ref|NP_276531.1| - 1.9e-06 27.4 0.0 1.4e-05 24.7 0.1 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif PhoH PF02562.16 gi|15679414|ref|NP_276531.1| - 0.0089 15.5 0.1 0.019 14.4 0.1 1.5 1 0 0 1 1 1 1 PhoH-like protein SWI2_SNF2 PF18766.1 gi|15679414|ref|NP_276531.1| - 0.0095 15.6 0.0 0.022 14.4 0.0 1.5 1 0 0 1 1 1 1 SWI2/SNF2 ATPase 5_3_exonuc PF01367.20 gi|15679414|ref|NP_276531.1| - 0.012 16.1 0.4 0.12 13.0 0.0 2.8 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold AAA_25 PF13481.6 gi|15679414|ref|NP_276531.1| - 0.1 12.2 0.4 0.4 10.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain DUF5400 PF17379.2 gi|15679415|ref|NP_276532.1| - 6.6e-41 138.8 10.6 7.4e-41 138.7 10.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5400) Cation_ATPase_C PF00689.21 gi|15679415|ref|NP_276532.1| - 2.6 7.7 8.9 4.2 7.0 8.9 1.4 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DrsE PF02635.15 gi|15679416|ref|NP_276533.1| - 3e-24 85.6 0.1 4.5e-24 85.1 0.1 1.3 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15679416|ref|NP_276533.1| - 7e-14 52.0 4.7 2.1e-07 31.0 0.2 2.7 2 1 1 3 3 3 2 DsrE/DsrF/DrsH-like family TusA PF01206.17 gi|15679416|ref|NP_276533.1| - 7.9e-09 35.2 0.1 2.2e-08 33.8 0.0 1.8 2 0 0 2 2 2 1 Sulfurtransferase TusA DUF169 PF02596.15 gi|15679417|ref|NP_276534.1| - 5.7e-54 183.2 0.0 6.4e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 GAF_2 PF13185.6 gi|15679418|ref|NP_276535.1| - 2.8e-06 27.7 0.2 0.13 12.5 0.2 3.4 2 1 0 2 2 2 2 GAF domain GAF_3 PF13492.6 gi|15679418|ref|NP_276535.1| - 3.6e-05 24.1 0.3 0.3 11.4 0.1 3.0 2 1 0 2 2 2 2 GAF domain Penicillinase_R PF03965.16 gi|15679418|ref|NP_276535.1| - 0.0033 17.8 1.0 0.015 15.6 0.0 2.5 2 1 0 2 2 2 1 Penicillinase repressor HTH_20 PF12840.7 gi|15679418|ref|NP_276535.1| - 0.016 15.3 0.0 0.04 14.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain GAF PF01590.26 gi|15679418|ref|NP_276535.1| - 0.016 15.8 0.0 1.1 9.9 0.0 3.1 2 1 0 2 2 2 0 GAF domain TrmB PF01978.19 gi|15679418|ref|NP_276535.1| - 0.026 14.4 0.2 0.16 11.9 0.0 2.4 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|15679418|ref|NP_276535.1| - 0.035 13.9 0.0 0.11 12.3 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|15679418|ref|NP_276535.1| - 0.065 13.1 0.2 0.21 11.5 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family V_ATPase_I PF01496.19 gi|15679418|ref|NP_276535.1| - 0.11 10.4 0.3 0.19 9.6 0.3 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MarR_2 PF12802.7 gi|15679418|ref|NP_276535.1| - 0.11 12.3 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family GAF_2 PF13185.6 gi|15679419|ref|NP_276536.1| - 4.5e-07 30.2 0.0 4.9e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|15679419|ref|NP_276536.1| - 0.00093 19.8 0.0 0.001 19.7 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|15679419|ref|NP_276536.1| - 0.002 18.5 0.0 0.0021 18.4 0.0 1.2 1 0 0 1 1 1 1 GAF domain DUF521 PF04412.13 gi|15679420|ref|NP_276537.1| - 2.2e-162 540.4 0.0 2.4e-162 540.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) DHHA1 PF02272.19 gi|15679421|ref|NP_276538.1| - 1.2e-17 64.6 0.2 4.9e-17 62.6 0.0 1.9 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|15679421|ref|NP_276538.1| - 0.0013 19.0 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 DHH family Ribosomal_S15 PF00312.22 gi|15679422|ref|NP_276539.1| - 1.5e-17 63.6 0.4 1.9e-17 63.2 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Ribosomal_S13_N PF08069.12 gi|15679422|ref|NP_276539.1| - 1.8e-15 56.7 0.1 3.3e-15 55.9 0.1 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ham1p_like PF01725.16 gi|15679423|ref|NP_276540.1| - 3.6e-49 167.2 0.0 4e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Methyltransf_17 PF12692.7 gi|15679423|ref|NP_276540.1| - 0.082 12.9 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase Peptidase_M22 PF00814.25 gi|15679424|ref|NP_276541.1| - 8.1e-95 317.6 0.0 1.1e-94 317.2 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family APH PF01636.23 gi|15679424|ref|NP_276541.1| - 1.5e-09 38.1 0.6 0.0012 18.8 0.2 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|15679424|ref|NP_276541.1| - 5.2e-07 29.3 0.0 9.5e-07 28.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.22 gi|15679424|ref|NP_276541.1| - 1.1e-06 28.4 0.0 1.8e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|15679424|ref|NP_276541.1| - 9.4e-06 25.1 0.0 7.8e-05 22.1 0.0 2.2 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.17 gi|15679424|ref|NP_276541.1| - 0.0032 16.8 0.0 0.0051 16.1 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase WaaY PF06176.11 gi|15679424|ref|NP_276541.1| - 0.0052 16.4 0.1 0.0098 15.5 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) BcrAD_BadFG PF01869.20 gi|15679424|ref|NP_276541.1| - 0.014 14.9 0.0 0.042 13.3 0.0 1.9 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family TatD_DNase PF01026.21 gi|15679424|ref|NP_276541.1| - 0.16 11.3 0.0 0.32 10.3 0.0 1.4 1 0 0 1 1 1 0 TatD related DNase Carbam_trans_N PF02543.15 gi|15679424|ref|NP_276541.1| - 0.19 11.3 0.0 0.3 10.7 0.0 1.2 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus SpoIIM PF01944.17 gi|15679426|ref|NP_276543.1| - 0.0005 20.1 19.5 0.00086 19.4 19.6 1.4 1 1 0 1 1 1 1 Stage II sporulation protein M BacA PF02673.18 gi|15679427|ref|NP_276544.1| - 2e-53 181.8 10.0 2.2e-53 181.6 10.0 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA BacA PF02673.18 gi|15679428|ref|NP_276545.1| - 1.4e-25 90.5 0.4 1.6e-25 90.3 0.4 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA Aminotran_4 PF01063.19 gi|15679429|ref|NP_276546.1| - 7.3e-53 179.7 0.0 8.6e-53 179.5 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV GBP PF02263.19 gi|15679429|ref|NP_276546.1| - 0.22 10.8 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain DUF11 PF01345.18 gi|15679430|ref|NP_276547.1| - 0.0066 16.7 0.4 0.022 15.0 0.4 1.9 1 1 0 1 1 1 1 Domain of unknown function DUF11 Mrr_cat PF04471.12 gi|15679431|ref|NP_276548.1| - 1.1e-16 60.9 0.4 1.5e-16 60.5 0.4 1.2 1 0 0 1 1 1 1 Restriction endonuclease Mrr_cat_2 PF13156.6 gi|15679431|ref|NP_276548.1| - 0.00023 21.0 0.1 0.00031 20.6 0.1 1.3 1 0 0 1 1 1 1 Restriction endonuclease GTP-bdg_N PF13167.6 gi|15679431|ref|NP_276548.1| - 0.0041 17.7 0.1 0.0079 16.8 0.1 1.4 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal SurE PF01975.17 gi|15679432|ref|NP_276549.1| - 5.6e-54 182.9 0.0 6.8e-54 182.6 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE DUF4405 PF14358.6 gi|15679434|ref|NP_276551.1| - 0.49 11.0 8.8 1.2 9.8 8.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4405) HTH_5 PF01022.20 gi|15679435|ref|NP_276552.1| - 5e-09 35.9 0.1 7.4e-09 35.3 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15679435|ref|NP_276552.1| - 7.6e-06 25.9 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|15679435|ref|NP_276552.1| - 2.2e-05 23.9 0.0 3.8e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|15679435|ref|NP_276552.1| - 0.00012 22.0 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain RP-C PF03428.13 gi|15679435|ref|NP_276552.1| - 0.011 15.4 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_36 PF13730.6 gi|15679435|ref|NP_276552.1| - 0.012 15.5 0.1 0.04 13.9 0.1 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|15679435|ref|NP_276552.1| - 0.015 15.2 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 gi|15679435|ref|NP_276552.1| - 0.018 15.0 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_10 PF04967.12 gi|15679435|ref|NP_276552.1| - 0.039 13.7 0.0 0.054 13.3 0.0 1.2 1 0 0 1 1 1 0 HTH DNA binding domain HTH_45 PF14947.6 gi|15679435|ref|NP_276552.1| - 0.04 13.9 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Phage_rep_org_N PF09681.10 gi|15679435|ref|NP_276552.1| - 0.048 13.6 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_11 PF08279.12 gi|15679435|ref|NP_276552.1| - 0.058 13.4 0.0 0.095 12.7 0.0 1.3 1 0 0 1 1 1 0 HTH domain DprA_WH PF17782.1 gi|15679435|ref|NP_276552.1| - 0.075 13.2 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 DprA winged helix domain GerE PF00196.19 gi|15679435|ref|NP_276552.1| - 0.084 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family MarR PF01047.22 gi|15679435|ref|NP_276552.1| - 0.1 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 gi|15679435|ref|NP_276552.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF1441 PF07278.11 gi|15679435|ref|NP_276552.1| - 0.18 11.7 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) MASE3 PF17159.4 gi|15679436|ref|NP_276553.1| - 0.00092 18.9 4.2 0.0011 18.7 4.2 1.1 1 0 0 1 1 1 1 Membrane-associated sensor domain SCAMP PF04144.13 gi|15679436|ref|NP_276553.1| - 0.063 13.6 4.9 0.072 13.4 4.9 1.1 1 0 0 1 1 1 0 SCAMP family Tetraspanin PF00335.20 gi|15679436|ref|NP_276553.1| - 1.6 8.4 6.5 1.7 8.3 6.5 1.1 1 0 0 1 1 1 0 Tetraspanin family LSM PF01423.22 gi|15679437|ref|NP_276554.1| - 5.4e-10 38.8 1.5 1.4e-08 34.3 1.5 2.0 1 1 0 1 1 1 1 LSM domain DUF150_C PF17384.2 gi|15679437|ref|NP_276554.1| - 0.035 14.2 0.2 0.039 14.1 0.2 1.2 1 0 0 1 1 1 0 RimP C-terminal SH3 domain IlvN PF07991.12 gi|15679439|ref|NP_276556.1| - 8.3e-74 246.6 0.6 1.1e-73 246.2 0.6 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|15679439|ref|NP_276556.1| - 2.2e-61 206.3 0.8 3.7e-61 205.6 0.8 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|15679439|ref|NP_276556.1| - 7.6e-08 32.8 0.0 2e-07 31.5 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|15679439|ref|NP_276556.1| - 2.9e-06 26.8 0.0 5.1e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|15679439|ref|NP_276556.1| - 1.2e-05 25.6 0.0 2.3e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|15679439|ref|NP_276556.1| - 0.00055 20.1 0.1 0.0011 19.0 0.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FMO-like PF00743.19 gi|15679439|ref|NP_276556.1| - 0.029 12.8 0.0 0.039 12.4 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_Gly3P_dh_N PF01210.23 gi|15679439|ref|NP_276556.1| - 0.16 12.0 0.7 2.1 8.3 0.1 2.7 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALS_ss_C PF10369.9 gi|15679440|ref|NP_276557.1| - 4.5e-32 110.1 0.1 3.1e-31 107.4 0.0 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|15679440|ref|NP_276557.1| - 2.2e-19 69.0 0.1 7.9e-19 67.3 0.1 1.9 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|15679440|ref|NP_276557.1| - 1.1e-14 53.8 0.8 2.2e-14 52.9 0.2 1.8 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|15679440|ref|NP_276557.1| - 0.0026 18.3 0.2 0.0054 17.3 0.2 1.5 1 0 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.12 gi|15679440|ref|NP_276557.1| - 0.0036 17.7 0.1 0.031 14.7 0.0 2.3 1 1 2 3 3 3 1 LOR/SDH bifunctional enzyme conserved region NIL PF09383.10 gi|15679440|ref|NP_276557.1| - 0.13 12.1 0.1 2.6 7.9 0.0 2.4 2 0 0 2 2 2 0 NIL domain YbbR PF07949.12 gi|15679440|ref|NP_276557.1| - 0.18 12.2 1.6 2.2 8.7 0.1 2.2 1 1 0 2 2 2 0 YbbR-like protein TPP_enzyme_N PF02776.18 gi|15679441|ref|NP_276558.1| - 3.7e-63 212.2 0.1 3.5e-58 196.0 0.1 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15679441|ref|NP_276558.1| - 1.8e-52 176.7 0.0 3.5e-52 175.8 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|15679441|ref|NP_276558.1| - 1.7e-49 167.5 0.0 1.2e-48 164.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PriA_3primeBD PF17764.1 gi|15679441|ref|NP_276558.1| - 0.088 12.7 0.0 0.23 11.3 0.0 1.7 1 0 0 1 1 1 0 3′ DNA-binding domain (3′BD) Strumpellin PF10266.9 gi|15679441|ref|NP_276558.1| - 0.34 8.6 0.0 0.47 8.1 0.0 1.0 1 0 0 1 1 1 0 Hereditary spastic paraplegia protein strumpellin GARS_A PF01071.19 gi|15679442|ref|NP_276559.1| - 3.4e-69 232.5 0.0 5.7e-69 231.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|15679442|ref|NP_276559.1| - 7.3e-24 84.4 0.1 1.3e-23 83.6 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|15679442|ref|NP_276559.1| - 9.1e-13 48.3 0.2 4.9e-12 46.0 0.2 2.2 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|15679442|ref|NP_276559.1| - 3.9e-05 23.8 0.0 9.7e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|15679442|ref|NP_276559.1| - 0.001 18.7 0.0 0.0052 16.4 0.1 2.0 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15679442|ref|NP_276559.1| - 0.0036 16.6 0.0 0.011 15.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp GSH-S_ATP PF02955.16 gi|15679442|ref|NP_276559.1| - 0.032 13.6 0.0 0.06 12.8 0.0 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp PF02222.22 gi|15679442|ref|NP_276559.1| - 0.037 13.6 0.0 0.089 12.4 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|15679442|ref|NP_276559.1| - 0.12 11.9 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain OTCace PF00185.24 gi|15679443|ref|NP_276560.1| - 4.6e-58 195.7 0.0 6.8e-58 195.2 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|15679443|ref|NP_276560.1| - 5.3e-46 156.3 0.0 7.2e-46 155.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain tRNA-synt_1d PF00750.19 gi|15679444|ref|NP_276561.1| - 2.2e-36 125.5 0.0 2.9e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|15679444|ref|NP_276561.1| - 4.2e-32 110.8 0.0 1.1e-31 109.4 0.0 1.8 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|15679444|ref|NP_276561.1| - 2.6e-18 66.4 0.1 5.4e-17 62.2 0.1 2.5 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.18 gi|15679444|ref|NP_276561.1| - 6.2e-10 38.5 0.0 0.00013 21.1 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|15679444|ref|NP_276561.1| - 3.4e-07 29.4 0.2 0.00087 18.1 0.1 3.4 4 0 0 4 4 4 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|15679444|ref|NP_276561.1| - 2.6e-05 23.7 0.1 0.00021 20.8 0.1 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 gi|15679444|ref|NP_276561.1| - 0.00039 18.8 0.0 0.00072 17.9 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Peptidase_S24 PF00717.23 gi|15679445|ref|NP_276562.1| - 2.9e-09 36.7 0.5 4.2e-09 36.2 0.5 1.3 1 0 0 1 1 1 1 Peptidase S24-like ILVD_EDD PF00920.21 gi|15679446|ref|NP_276563.1| - 1.8e-203 676.9 5.3 2e-203 676.7 5.3 1.0 1 0 0 1 1 1 1 Dehydratase family MgtC PF02308.16 gi|15679447|ref|NP_276564.1| - 5.1e-21 75.3 12.8 7.7e-21 74.7 12.8 1.3 1 0 0 1 1 1 1 MgtC family Cytochrome-c551 PF10643.9 gi|15679447|ref|NP_276564.1| - 0.0033 17.0 0.4 0.0033 17.0 0.4 2.2 1 1 1 2 2 2 1 Photosystem P840 reaction-centre cytochrome c-551 DUF805 PF05656.14 gi|15679447|ref|NP_276564.1| - 3.9 7.9 12.8 3.3 8.2 8.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF805) DUF2417 PF10329.9 gi|15679447|ref|NP_276564.1| - 8 5.8 8.0 11 5.3 1.0 2.1 1 1 1 2 2 2 0 Region of unknown function (DUF2417) DUF4010 PF13194.6 gi|15679448|ref|NP_276565.1| - 5.7e-62 209.1 27.5 5.7e-62 209.1 27.5 1.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4010) Cupin_2 PF07883.11 gi|15679449|ref|NP_276566.1| - 8.4e-09 35.0 0.0 1e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|15679449|ref|NP_276566.1| - 0.00013 21.9 0.0 0.00016 21.6 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|15679449|ref|NP_276566.1| - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_6 PF12852.7 gi|15679449|ref|NP_276566.1| - 0.012 15.3 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 Cupin EutQ PF06249.12 gi|15679449|ref|NP_276566.1| - 0.033 13.9 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ Ectoine_synth PF06339.12 gi|15679449|ref|NP_276566.1| - 0.038 14.2 0.0 0.041 14.1 0.0 1.2 1 0 0 1 1 1 0 Ectoine synthase Ppnp PF06865.11 gi|15679449|ref|NP_276566.1| - 0.074 13.5 0.0 0.094 13.1 0.0 1.2 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase Prismane PF03063.20 gi|161484928|ref|NP_276567.2| - 7.3e-116 387.9 0.0 5.5e-98 328.9 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family TrmB PF01978.19 gi|15679451|ref|NP_276568.1| - 1.3e-23 82.6 0.1 2.4e-23 81.8 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|15679451|ref|NP_276568.1| - 7.3e-05 22.5 0.0 0.00036 20.3 0.0 2.2 2 1 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|15679451|ref|NP_276568.1| - 0.00096 19.5 0.0 0.0018 18.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 gi|15679451|ref|NP_276568.1| - 0.0087 15.9 0.1 0.017 15.0 0.1 1.5 1 0 0 1 1 1 1 MarR family Regulator_TrmB PF11495.8 gi|15679451|ref|NP_276568.1| - 0.018 14.2 0.0 0.031 13.5 0.0 1.4 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB PLDc_2 PF13091.6 gi|15679451|ref|NP_276568.1| - 0.07 13.0 0.2 0.72 9.7 0.0 2.3 1 1 1 2 2 2 0 PLD-like domain HTH_Crp_2 PF13545.6 gi|15679451|ref|NP_276568.1| - 0.082 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_46 PF15977.5 gi|15679451|ref|NP_276568.1| - 0.088 12.8 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding GntR PF00392.21 gi|15679451|ref|NP_276568.1| - 0.1 12.3 1.0 0.24 11.1 0.2 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|15679451|ref|NP_276568.1| - 0.11 12.6 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Cdc6_C PF09079.11 gi|15679451|ref|NP_276568.1| - 0.13 12.3 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain tRNA-Thr_ED PF08915.11 gi|15679452|ref|NP_276569.1| - 7.9e-55 184.7 0.1 1.3e-54 183.9 0.1 1.4 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|15679452|ref|NP_276569.1| - 3.2e-25 88.1 0.3 8.2e-25 86.8 0.3 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|15679452|ref|NP_276569.1| - 4.1e-17 62.7 0.0 1.2e-16 61.2 0.0 1.8 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon2 PF12745.7 gi|15679452|ref|NP_276569.1| - 0.00087 18.9 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs AAA_31 PF13614.6 gi|15679453|ref|NP_276570.1| - 8.3e-41 139.8 0.0 1.1e-40 139.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15679453|ref|NP_276570.1| - 2.7e-05 24.2 0.0 3.3e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|15679453|ref|NP_276570.1| - 0.0016 18.0 0.0 0.0041 16.6 0.0 1.6 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ParA PF10609.9 gi|15679453|ref|NP_276570.1| - 0.016 14.7 0.0 0.047 13.1 0.0 1.7 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|15679453|ref|NP_276570.1| - 0.05 12.9 0.0 0.084 12.1 0.0 1.4 1 0 0 1 1 1 0 ATPase MipZ Rap1a PF18602.1 gi|15679454|ref|NP_276571.1| - 0.078 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 Rap1a immunity proteins DUF5047 PF16466.5 gi|15679454|ref|NP_276571.1| - 0.16 12.3 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5047) Radical_SAM PF04055.21 gi|15679455|ref|NP_276572.1| - 2.2e-12 47.7 0.0 4e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily HHH_3 PF12836.7 gi|15679455|ref|NP_276572.1| - 1.1e-05 25.5 0.0 0.00024 21.3 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15679455|ref|NP_276572.1| - 0.00011 22.7 0.1 0.0007 20.1 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|15679455|ref|NP_276572.1| - 0.0019 18.0 0.6 0.0076 16.1 0.0 2.3 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|15679455|ref|NP_276572.1| - 0.036 14.2 0.0 0.096 12.8 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif Zn_Tnp_IS1595 PF12760.7 gi|15679456|ref|NP_276573.1| - 0.0096 15.9 3.8 0.03 14.3 3.8 2.0 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|15679456|ref|NP_276573.1| - 0.033 14.6 4.5 0.033 14.6 4.5 2.1 1 1 1 2 2 2 0 Restriction alleviation protein Lar Prim_Zn_Ribbon PF08273.12 gi|15679456|ref|NP_276573.1| - 0.04 14.2 8.5 0.076 13.3 8.5 1.5 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase SAM_Exu PF18609.1 gi|15679456|ref|NP_276573.1| - 0.054 13.6 0.5 0.1 12.7 0.5 1.4 1 0 0 1 1 1 0 Exuperantia SAM-like domain zf-RanBP PF00641.18 gi|15679456|ref|NP_276573.1| - 0.07 12.5 0.5 0.07 12.5 0.5 1.9 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-AN1 PF01428.16 gi|15679456|ref|NP_276573.1| - 6.6 7.0 15.1 0.21 11.8 2.3 3.1 2 1 1 3 3 3 0 AN1-like Zinc finger GATase_3 PF07685.14 gi|15679457|ref|NP_276574.1| - 8.8e-40 136.4 0.0 1.4e-39 135.8 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|15679457|ref|NP_276574.1| - 9.3e-16 58.1 0.1 1.5e-15 57.3 0.1 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|15679457|ref|NP_276574.1| - 7.7e-15 55.2 3.1 4.7e-12 46.2 3.1 2.2 1 1 0 1 1 1 1 AAA domain SNO PF01174.19 gi|15679457|ref|NP_276574.1| - 0.0025 17.7 0.0 0.0052 16.7 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family Peptidase_S51 PF03575.17 gi|15679457|ref|NP_276574.1| - 0.007 16.0 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|15679457|ref|NP_276574.1| - 0.062 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family DUF1611 PF07755.11 gi|15679457|ref|NP_276574.1| - 0.13 11.5 0.3 0.29 10.4 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain O_anti_polymase PF01901.16 gi|15679458|ref|NP_276575.1| - 1.8e-104 349.6 29.1 2.2e-104 349.4 29.1 1.0 1 0 0 1 1 1 1 Putative O-antigen polymerase DUF2371 PF10177.9 gi|15679458|ref|NP_276575.1| - 0.074 13.2 0.1 0.32 11.2 0.0 2.1 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) Pox_I5 PF04713.12 gi|15679458|ref|NP_276575.1| - 1.2 9.2 12.1 1.6 8.9 0.8 3.7 3 0 0 3 3 3 0 Poxvirus protein I5 Epimerase_2 PF02350.19 gi|15679459|ref|NP_276576.1| - 2.5e-05 23.3 0.0 0.017 14.0 0.0 2.2 2 0 0 2 2 2 2 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 gi|15679459|ref|NP_276576.1| - 0.0002 20.5 0.0 0.00033 19.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_tran_28_C PF04101.16 gi|15679459|ref|NP_276576.1| - 0.011 15.7 0.0 0.02 14.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 gi|15679459|ref|NP_276576.1| - 0.016 15.7 0.7 0.11 12.9 0.5 2.4 2 1 0 2 2 2 0 Glycosyl transferases group 1 Peptidase_C39 PF03412.15 gi|15679460|ref|NP_276577.1| - 4.8e-36 123.5 0.0 5.3e-36 123.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase C39 family Peptidase_C39_2 PF13529.6 gi|15679460|ref|NP_276577.1| - 9.5e-06 26.2 0.2 0.0014 19.2 0.0 2.1 1 1 1 2 2 2 2 Peptidase_C39 like family DUF3335 PF11814.8 gi|15679460|ref|NP_276577.1| - 0.001 18.6 0.5 0.066 12.7 0.3 2.5 1 1 1 2 2 2 1 Peptidase_C39 like family Peptidase_C58 PF03543.14 gi|15679460|ref|NP_276577.1| - 0.037 13.7 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 Yersinia/Haemophilus virulence surface antigen Phytochelatin PF05023.14 gi|15679460|ref|NP_276577.1| - 0.13 11.4 0.0 0.17 11.0 0.0 1.3 1 1 0 1 1 1 0 Phytochelatin synthase MTD PF01993.18 gi|15679461|ref|NP_276578.1| - 1.1e-139 464.4 3.0 1.3e-139 464.2 3.0 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase TraQ PF09679.10 gi|15679461|ref|NP_276578.1| - 0.15 12.0 0.0 0.48 10.4 0.0 1.8 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) GATase_4 PF13230.6 gi|15679462|ref|NP_276579.1| - 3e-27 95.2 0.0 3e-27 95.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_4 PF13230.6 gi|15679463|ref|NP_276580.1| - 5.6e-26 91.0 0.0 6.9e-26 90.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II IGPD PF00475.18 gi|15679464|ref|NP_276581.1| - 1.3e-59 200.7 2.9 1.5e-59 200.4 2.9 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Fer4 PF00037.27 gi|15679465|ref|NP_276582.1| - 2e-13 49.5 14.2 2.8e-07 30.0 5.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679465|ref|NP_276582.1| - 4.6e-09 36.3 25.3 4.1e-07 30.1 13.5 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679465|ref|NP_276582.1| - 4.8e-09 36.7 8.6 7e-05 23.3 1.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679465|ref|NP_276582.1| - 1.5e-08 34.4 13.7 8.7e-05 22.4 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679465|ref|NP_276582.1| - 1.6e-08 34.5 23.6 1e-07 32.0 13.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679465|ref|NP_276582.1| - 5.7e-08 32.4 11.8 2.4e-06 27.3 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679465|ref|NP_276582.1| - 1.3e-07 32.4 10.2 0.00011 23.0 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|15679465|ref|NP_276582.1| - 1.6e-07 31.7 7.6 0.0027 18.2 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679465|ref|NP_276582.1| - 1.4e-06 28.3 8.5 1.9e-06 27.9 8.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679465|ref|NP_276582.1| - 0.00014 22.2 15.4 0.034 14.6 4.7 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679465|ref|NP_276582.1| - 0.0025 18.3 15.8 0.0029 18.1 4.1 2.3 2 1 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|15679465|ref|NP_276582.1| - 0.0028 18.0 17.1 0.017 15.6 5.8 2.2 1 1 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15679465|ref|NP_276582.1| - 0.0078 17.1 19.3 0.042 14.8 5.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679465|ref|NP_276582.1| - 0.016 15.9 8.8 0.027 15.2 0.5 2.4 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15679465|ref|NP_276582.1| - 0.048 14.5 6.3 0.65 10.9 1.2 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679465|ref|NP_276582.1| - 5.8 7.1 9.8 45 4.3 1.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain TOBE PF03459.17 gi|15679466|ref|NP_276583.1| - 3.4e-18 65.7 0.1 3.8e-18 65.6 0.1 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 gi|15679466|ref|NP_276583.1| - 0.00019 21.5 0.1 0.00021 21.4 0.1 1.0 1 0 0 1 1 1 1 TOBE domain HTH_1 PF00126.27 gi|15679467|ref|NP_276584.1| - 4.7e-11 42.5 0.0 7.1e-11 41.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PrpR_N PF06506.11 gi|15679467|ref|NP_276584.1| - 0.077 12.6 0.0 0.16 11.5 0.0 1.5 2 0 0 2 2 2 0 Propionate catabolism activator Polysacc_synt_C PF14667.6 gi|15679468|ref|NP_276585.1| - 9e-22 77.7 26.6 9e-22 77.7 26.6 3.2 2 1 1 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|15679468|ref|NP_276585.1| - 4.6e-18 65.1 28.4 5.8e-18 64.7 28.4 1.1 1 0 0 1 1 1 1 Lipid II flippase MurJ Polysacc_synt_3 PF13440.6 gi|15679468|ref|NP_276585.1| - 1.5e-15 57.2 9.4 1.5e-15 57.2 9.4 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|15679468|ref|NP_276585.1| - 2.6e-14 53.2 16.6 2.6e-14 53.2 16.6 3.4 3 2 1 4 4 4 1 MatE Polysacc_synt PF01943.17 gi|15679468|ref|NP_276585.1| - 8.8e-13 48.2 12.1 8.8e-13 48.2 12.1 3.2 3 1 0 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|15679469|ref|NP_276586.1| - 4.3e-17 62.4 2.1 4.9e-17 62.2 2.1 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|15679469|ref|NP_276586.1| - 3.9e-06 26.3 0.1 4.9e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|15679469|ref|NP_276586.1| - 3.9e-06 26.6 1.8 4.7e-06 26.3 1.8 1.0 1 0 0 1 1 1 1 MatE FMN_red PF03358.15 gi|15679470|ref|NP_276587.1| - 8e-34 116.6 0.0 1e-33 116.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|15679470|ref|NP_276587.1| - 1.4e-05 24.9 0.0 1.7e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.9 gi|15679470|ref|NP_276587.1| - 0.011 15.5 0.1 0.014 15.1 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Fae PF08714.11 gi|161484927|ref|NP_276588.2| - 1.5e-70 236.3 0.0 2.6e-70 235.5 0.0 1.4 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.24 gi|161484927|ref|NP_276588.2| - 3.2e-26 92.3 0.0 4.6e-26 91.8 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.19 gi|161484927|ref|NP_276588.2| - 0.0051 16.2 0.3 0.014 14.8 0.3 1.8 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.17 gi|161484927|ref|NP_276588.2| - 0.038 13.5 1.6 3 7.2 0.1 2.3 1 1 1 2 2 2 0 PcrB family Sld7_C PF18596.1 gi|161484927|ref|NP_276588.2| - 0.05 13.8 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Sld7 C-terminal domain TMP-TENI PF02581.17 gi|161484927|ref|NP_276588.2| - 0.062 12.6 0.1 0.13 11.6 0.1 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase R_equi_Vir PF05526.11 gi|15679472|ref|NP_276589.1| - 0.076 12.9 0.1 0.19 11.5 0.1 1.6 1 1 1 2 2 2 0 Rhodococcus equi virulence-associated protein PALP PF00291.25 gi|15679473|ref|NP_276590.1| - 1.2e-42 146.3 0.0 1.5e-42 146.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF1786 PF08735.10 gi|15679474|ref|NP_276591.1| - 4.6e-85 284.9 0.1 5.9e-85 284.6 0.1 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) PHP PF02811.19 gi|15679475|ref|NP_276592.1| - 3.4e-07 30.7 0.0 3.4e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|15679476|ref|NP_276593.1| - 3.5e-20 71.5 0.0 4.5e-20 71.1 0.0 1.1 1 0 0 1 1 1 1 PHP-associated DUF63 PF01889.17 gi|15679477|ref|NP_276594.1| - 1.8e-67 228.4 9.3 2.1e-67 228.2 9.3 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 FeoB_associated PF12669.7 gi|15679477|ref|NP_276594.1| - 0.84 10.1 3.2 0.46 10.9 0.3 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein AcrZ PF10766.9 gi|15679477|ref|NP_276594.1| - 1.1 8.9 5.8 0.14 11.7 0.6 2.3 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ HMGL-like PF00682.19 gi|15679478|ref|NP_276595.1| - 1.4e-91 306.7 0.6 2.9e-91 305.7 0.6 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|15679478|ref|NP_276595.1| - 9e-37 126.0 3.7 1.8e-36 124.9 3.7 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain AP_endonuc_2 PF01261.24 gi|15679478|ref|NP_276595.1| - 0.0035 16.8 0.1 0.054 12.9 0.0 2.8 2 1 1 3 3 3 1 Xylose isomerase-like TIM barrel Oxidored_nitro PF00148.19 gi|15679479|ref|NP_276596.1| - 4.3e-93 312.2 0.0 4.8e-93 312.0 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Alba PF01918.21 gi|15679480|ref|NP_276597.1| - 1.2e-21 76.3 0.5 1.5e-21 75.9 0.5 1.1 1 0 0 1 1 1 1 Alba Phage_TAC_10 PF10963.8 gi|15679480|ref|NP_276597.1| - 0.026 14.7 0.1 0.038 14.2 0.1 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone PEP-utilizers PF00391.23 gi|15679480|ref|NP_276597.1| - 0.072 12.8 0.4 0.091 12.5 0.4 1.3 1 1 0 1 1 1 0 PEP-utilising enzyme, mobile domain Rpp20 PF12328.8 gi|15679480|ref|NP_276597.1| - 0.11 12.5 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P Flavodoxin_5 PF12724.7 gi|15679481|ref|NP_276598.1| - 1.1e-13 51.6 0.0 1.9e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Putative_PNPOx PF01243.20 gi|15679481|ref|NP_276598.1| - 1.2e-11 44.6 0.0 3.4e-11 43.2 0.0 1.7 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|15679481|ref|NP_276598.1| - 3.5e-07 30.3 0.0 5.7e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Flavodoxin_3 PF12641.7 gi|15679481|ref|NP_276598.1| - 2.1e-05 24.3 0.0 3.3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain F420H2_quin_red PF04075.14 gi|15679481|ref|NP_276598.1| - 0.031 14.4 0.0 0.052 13.7 0.0 1.4 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase PQQ_2 PF13360.6 gi|15679482|ref|NP_276599.1| - 4.9e-83 278.4 16.1 1.3e-23 83.9 1.9 3.3 1 1 3 4 4 4 4 PQQ-like domain PQQ PF01011.21 gi|15679482|ref|NP_276599.1| - 4.6e-82 266.4 24.4 6.9e-12 44.7 0.1 8.2 8 0 0 8 8 8 8 PQQ enzyme repeat PQQ_3 PF13570.6 gi|15679482|ref|NP_276599.1| - 7.3e-79 258.5 26.8 6.7e-12 45.5 3.0 8.2 8 0 0 8 8 8 8 PQQ-like domain WD40_like PF17005.5 gi|15679482|ref|NP_276599.1| - 1.3e-05 24.7 0.0 0.71 9.1 0.0 3.6 2 1 1 3 3 3 3 WD40-like domain SUKH-4 PF14435.6 gi|15679482|ref|NP_276599.1| - 4.6e-05 23.5 0.2 1.9 8.5 0.0 3.8 2 2 2 4 4 4 2 SUKH-4 immunity protein ANAPC4_WD40 PF12894.7 gi|15679482|ref|NP_276599.1| - 0.0047 17.2 0.0 52 4.2 0.0 4.9 4 1 2 6 6 6 0 Anaphase-promoting complex subunit 4 WD40 domain Itfg2 PF15907.5 gi|15679482|ref|NP_276599.1| - 0.11 11.6 0.0 0.26 10.3 0.0 1.6 2 0 0 2 2 2 0 Integrin-alpha FG-GAP repeat-containing protein 2 ABC2_membrane_3 PF12698.7 gi|15679483|ref|NP_276600.1| - 1.2e-42 146.3 19.7 1.6e-42 145.9 19.7 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|15679483|ref|NP_276600.1| - 3.2e-38 131.3 29.0 8.5e-37 126.6 18.0 2.6 3 0 0 3 3 3 2 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|15679483|ref|NP_276600.1| - 9.5e-19 67.8 15.4 1.5e-18 67.1 15.4 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein CcmB PF03379.13 gi|15679483|ref|NP_276600.1| - 8.3e-07 28.7 16.0 1.9e-05 24.3 6.8 2.6 2 1 0 3 3 3 2 CcmB protein DUF2206 PF09971.9 gi|15679483|ref|NP_276600.1| - 0.94 8.2 7.6 1.6 7.4 7.6 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) ABC_tran PF00005.27 gi|15679484|ref|NP_276601.1| - 1.5e-31 109.7 0.0 2.8e-31 108.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679484|ref|NP_276601.1| - 3e-16 60.1 0.2 8.7e-12 45.5 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|15679484|ref|NP_276601.1| - 8e-09 36.1 0.3 2.5e-08 34.5 0.2 2.0 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|15679484|ref|NP_276601.1| - 4.6e-06 26.6 0.9 0.066 12.9 0.0 2.5 2 1 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|15679484|ref|NP_276601.1| - 0.0029 18.1 0.1 0.0066 17.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 gi|15679484|ref|NP_276601.1| - 0.0049 16.3 0.0 0.042 13.2 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 gi|15679484|ref|NP_276601.1| - 0.013 15.7 0.1 0.21 11.8 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|15679484|ref|NP_276601.1| - 0.033 13.9 0.0 0.059 13.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|15679484|ref|NP_276601.1| - 0.056 13.0 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|15679484|ref|NP_276601.1| - 0.058 13.0 0.1 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA PF00004.29 gi|15679484|ref|NP_276601.1| - 0.063 13.7 0.2 0.68 10.4 0.2 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|15679484|ref|NP_276601.1| - 0.14 11.9 0.0 0.97 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain PadR PF03551.14 gi|15679485|ref|NP_276602.1| - 4.2e-16 58.7 0.0 1e-15 57.4 0.0 1.6 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|15679485|ref|NP_276602.1| - 4.5e-05 24.1 0.0 6.2e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Replication terminator protein DUF505 PF04458.12 gi|15679485|ref|NP_276602.1| - 0.024 13.0 0.0 0.033 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_45 PF14947.6 gi|15679485|ref|NP_276602.1| - 0.055 13.5 0.1 0.17 11.9 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_34 PF13601.6 gi|15679485|ref|NP_276602.1| - 0.061 13.5 0.0 0.093 12.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|15679485|ref|NP_276602.1| - 0.068 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) AP_endonuc_2 PF01261.24 gi|15679486|ref|NP_276603.1| - 2e-18 66.6 0.1 2.9e-18 66.1 0.1 1.3 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel PdxJ PF03740.13 gi|15679486|ref|NP_276603.1| - 0.021 14.0 0.0 2.3 7.2 0.0 2.3 2 0 0 2 2 2 0 Pyridoxal phosphate biosynthesis protein PdxJ DUF1211 PF06736.11 gi|15679487|ref|NP_276604.1| - 1.9e-24 85.9 3.2 4.3e-24 84.8 3.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1211) AA_permease_2 PF13520.6 gi|15679487|ref|NP_276604.1| - 0.0008 18.4 7.2 0.0011 17.9 7.2 1.2 1 0 0 1 1 1 1 Amino acid permease DUF485 PF04341.12 gi|15679487|ref|NP_276604.1| - 5.1 7.1 9.3 0.68 9.9 0.6 2.8 1 1 1 2 2 2 0 Protein of unknown function, DUF485 DrsE PF02635.15 gi|15679488|ref|NP_276605.1| - 9.8e-12 45.3 0.0 1.2e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15679488|ref|NP_276605.1| - 0.087 12.7 0.0 0.42 10.5 0.0 1.8 1 1 1 2 2 2 0 DsrE/DsrF/DrsH-like family Lipase_2 PF01674.18 gi|15679488|ref|NP_276605.1| - 0.3 10.6 0.9 0.42 10.1 0.0 1.7 2 0 0 2 2 2 0 Lipase (class 2) 5_nucleotid_C PF02872.18 gi|15679489|ref|NP_276606.1| - 2.2e-19 70.2 0.0 3.8e-19 69.4 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 gi|15679489|ref|NP_276606.1| - 0.00089 19.8 0.2 0.064 13.7 0.2 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Hydrolase PF00702.26 gi|15679490|ref|NP_276607.1| - 1.8e-28 100.2 0.0 2.4e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15679490|ref|NP_276607.1| - 5.1e-05 23.1 0.0 0.67 9.6 0.0 3.1 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase TusA PF01206.17 gi|15679490|ref|NP_276607.1| - 0.059 13.2 0.1 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 Sulfurtransferase TusA HAD_2 PF13419.6 gi|15679490|ref|NP_276607.1| - 0.061 13.4 0.1 0.26 11.3 0.0 2.0 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF4566 PF15130.6 gi|15679490|ref|NP_276607.1| - 0.15 11.4 0.0 0.27 10.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4566) LysE PF01810.18 gi|15679491|ref|NP_276608.1| - 2.9e-48 163.9 9.7 3.5e-48 163.7 9.7 1.1 1 0 0 1 1 1 1 LysE type translocator DUF2633 PF11119.8 gi|15679491|ref|NP_276608.1| - 0.35 10.8 1.1 1 9.3 1.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) EmrE PF13536.6 gi|15679491|ref|NP_276608.1| - 2.4 7.7 11.3 0.024 14.2 3.2 1.6 2 0 0 2 2 2 0 Putative multidrug resistance efflux transporter OCD_Mu_crystall PF02423.15 gi|15679492|ref|NP_276609.1| - 3e-138 460.1 0.0 3.4e-138 459.9 0.0 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|15679492|ref|NP_276609.1| - 1.9e-05 24.7 0.0 3.6e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|15679492|ref|NP_276609.1| - 0.0017 18.9 0.0 0.0028 18.2 0.0 1.3 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|15679492|ref|NP_276609.1| - 0.017 15.3 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Amidase PF01425.21 gi|15679493|ref|NP_276610.1| - 2.4e-136 455.3 0.0 2.7e-136 455.2 0.0 1.0 1 0 0 1 1 1 1 Amidase GATase_3 PF07685.14 gi|15679494|ref|NP_276611.1| - 5.6e-14 52.2 0.0 8.7e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|15679494|ref|NP_276611.1| - 8.1e-13 48.6 0.1 1.8e-10 41.0 0.1 2.2 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15679494|ref|NP_276611.1| - 1.7e-09 37.8 0.0 4.7e-09 36.4 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GATase_5 PF13507.6 gi|15679494|ref|NP_276611.1| - 2.8e-06 26.6 0.0 0.0039 16.3 0.0 2.9 2 1 0 2 2 2 2 CobB/CobQ-like glutamine amidotransferase domain MobB PF03205.14 gi|15679494|ref|NP_276611.1| - 3.3e-05 23.8 0.1 0.00092 19.1 0.0 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B DJ-1_PfpI PF01965.24 gi|15679494|ref|NP_276611.1| - 0.00075 19.3 0.0 0.0027 17.5 0.0 1.8 2 0 0 2 2 2 1 DJ-1/PfpI family GATase PF00117.28 gi|15679494|ref|NP_276611.1| - 0.003 17.3 0.0 0.0062 16.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I ATPase PF06745.13 gi|15679495|ref|NP_276612.1| - 3.2e-64 216.4 0.2 3.6e-64 216.3 0.2 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15679495|ref|NP_276612.1| - 7.1e-07 29.0 0.0 1.8e-06 27.7 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|15679495|ref|NP_276612.1| - 4.8e-05 23.2 0.0 8.6e-05 22.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|15679495|ref|NP_276612.1| - 0.00013 21.8 0.0 0.00073 19.3 0.0 2.0 2 1 0 2 2 2 1 IstB-like ATP binding protein GvpD PF07088.11 gi|15679495|ref|NP_276612.1| - 0.00036 19.3 0.0 0.0005 18.8 0.0 1.3 1 1 0 1 1 1 1 GvpD gas vesicle protein ATPase_2 PF01637.18 gi|15679495|ref|NP_276612.1| - 0.016 15.1 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|15679495|ref|NP_276612.1| - 0.028 14.8 0.0 0.037 14.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|15679495|ref|NP_276612.1| - 0.037 14.0 0.0 0.076 12.9 0.0 1.4 1 1 0 1 1 1 0 NTPase AAA_22 PF13401.6 gi|15679495|ref|NP_276612.1| - 0.05 13.9 0.2 0.091 13.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|15679495|ref|NP_276612.1| - 0.078 12.2 0.0 0.081 12.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) UPF0227 PF05728.12 gi|15679495|ref|NP_276612.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) AAA_5 PF07728.14 gi|15679495|ref|NP_276612.1| - 0.13 12.3 0.0 0.24 11.4 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) DnaB_C PF03796.15 gi|15679495|ref|NP_276612.1| - 0.15 11.4 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain NACHT PF05729.12 gi|15679495|ref|NP_276612.1| - 0.19 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain DHBP_synthase PF00926.19 gi|15679496|ref|NP_276613.1| - 1.2e-64 217.3 0.1 1.4e-64 217.1 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|15679496|ref|NP_276613.1| - 0.12 12.1 0.5 8.5 6.2 0.0 2.7 2 1 0 2 2 2 0 PEP-utilising enzyme, mobile domain CTP-dep_RFKase PF01982.16 gi|15679497|ref|NP_276614.1| - 8.2e-33 113.1 0.0 9.6e-33 112.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF120 MazE_antitoxin PF04014.18 gi|15679497|ref|NP_276614.1| - 0.031 14.2 0.2 6.3 6.8 0.0 2.4 2 0 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin S4_2 PF13275.6 gi|15679497|ref|NP_276614.1| - 0.06 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 S4 domain tRNA-synt_2d PF01409.20 gi|15679498|ref|NP_276615.1| - 1.7e-60 204.5 0.0 5.8e-57 193.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|15679498|ref|NP_276615.1| - 4.7e-11 42.6 0.1 1.3e-10 41.2 0.1 1.8 1 0 0 1 1 1 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|15679498|ref|NP_276615.1| - 1e-07 31.6 0.0 5.1e-06 26.1 0.0 2.1 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2b PF00587.25 gi|15679498|ref|NP_276615.1| - 0.011 15.7 0.0 0.031 14.2 0.0 1.8 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|15679498|ref|NP_276615.1| - 0.097 11.7 0.0 4.6 6.2 0.0 2.5 3 0 0 3 3 3 0 tRNA synthetases class II (D, K and N) FAD_binding_2 PF00890.24 gi|15679499|ref|NP_276616.1| - 8.6e-104 347.9 2.3 1.2e-103 347.5 2.3 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|15679499|ref|NP_276616.1| - 1.2e-22 80.3 0.0 2.2e-22 79.4 0.0 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|15679499|ref|NP_276616.1| - 4.6e-08 32.7 1.2 0.0053 16.0 0.2 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15679499|ref|NP_276616.1| - 0.00041 20.0 0.1 0.00085 19.0 0.1 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|15679499|ref|NP_276616.1| - 0.0031 16.3 1.9 0.37 9.4 0.1 2.9 3 0 0 3 3 3 2 HI0933-like protein Thi4 PF01946.17 gi|15679499|ref|NP_276616.1| - 0.011 15.0 4.6 0.025 13.8 0.1 3.1 4 0 0 4 4 4 0 Thi4 family FAD_binding_3 PF01494.19 gi|15679499|ref|NP_276616.1| - 0.073 12.3 0.1 0.18 11.0 0.1 1.6 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 gi|15679499|ref|NP_276616.1| - 0.37 9.8 8.2 0.31 10.1 0.6 3.0 3 0 0 3 3 3 0 Glucose inhibited division protein A Hydrolase_like PF13242.6 gi|15679500|ref|NP_276617.1| - 0.00083 19.4 0.3 0.0015 18.6 0.3 1.4 1 1 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|15679500|ref|NP_276617.1| - 0.058 13.8 0.1 0.11 12.9 0.0 1.5 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|15679501|ref|NP_276618.1| - 4.8e-11 43.1 0.0 5.5e-11 42.9 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15679501|ref|NP_276618.1| - 0.0001 22.8 0.0 0.00013 22.5 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15679501|ref|NP_276618.1| - 0.0052 17.1 0.0 0.062 13.6 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Amidohydro_1 PF01979.20 gi|15679502|ref|NP_276619.1| - 1.3e-89 300.9 0.1 1.5e-89 300.7 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15679502|ref|NP_276619.1| - 2e-22 80.3 2.0 1.3e-17 64.5 0.1 2.1 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|15679502|ref|NP_276619.1| - 0.0012 18.2 0.0 0.0024 17.2 0.0 1.4 1 0 0 1 1 1 1 Adenosine/AMP deaminase PUA_3 PF17785.1 gi|15679502|ref|NP_276619.1| - 0.011 15.5 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 PUA-like domain TatD_DNase PF01026.21 gi|15679502|ref|NP_276619.1| - 0.066 12.6 0.0 0.091 12.1 0.0 1.4 1 0 0 1 1 1 0 TatD related DNase HisG PF01634.18 gi|15679503|ref|NP_276620.1| - 7.8e-50 169.0 0.0 1.2e-49 168.4 0.0 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|15679503|ref|NP_276620.1| - 9.1e-27 93.0 0.2 1.9e-26 92.0 0.2 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain LysR_substrate PF03466.20 gi|15679503|ref|NP_276620.1| - 0.0071 15.7 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain MGS PF02142.22 gi|15679503|ref|NP_276620.1| - 0.099 12.8 0.3 0.87 9.8 0.3 2.6 2 2 0 2 2 2 0 MGS-like domain FAA_hydrolase PF01557.18 gi|15679504|ref|NP_276621.1| - 2.4e-67 226.8 0.1 2.8e-67 226.6 0.1 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|15679504|ref|NP_276621.1| - 0.0056 17.5 0.0 0.014 16.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF2437) tRNA-synt_1 PF00133.22 gi|15679505|ref|NP_276622.1| - 3.6e-65 220.4 0.0 3e-63 214.0 0.0 3.0 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|15679505|ref|NP_276622.1| - 1.6e-26 93.1 0.0 2.9e-26 92.3 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|15679505|ref|NP_276622.1| - 6.4e-23 81.1 0.6 1.5e-09 37.1 0.1 3.4 2 2 1 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|15679505|ref|NP_276622.1| - 3.3e-09 36.5 0.0 8.2e-09 35.2 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|15679505|ref|NP_276622.1| - 6e-09 35.7 0.0 0.00063 19.2 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|15679505|ref|NP_276622.1| - 0.00024 20.2 0.0 0.012 14.6 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1b PF00579.25 gi|15679505|ref|NP_276622.1| - 0.14 11.5 0.0 0.91 8.8 0.0 2.3 3 0 0 3 3 3 0 tRNA synthetases class I (W and Y) CutA1 PF03091.15 gi|15679506|ref|NP_276623.1| - 5.6e-37 125.6 0.0 6.2e-37 125.4 0.0 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein DEAD PF00270.29 gi|15679506|ref|NP_276623.1| - 0.005 16.6 0.0 0.0063 16.3 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase ATP-synt_F PF01990.17 gi|15679506|ref|NP_276623.1| - 0.11 12.9 0.5 0.76 10.1 0.1 1.9 1 1 1 2 2 2 0 ATP synthase (F/14-kDa) subunit TetM_leader PF08076.11 gi|15679506|ref|NP_276623.1| - 0.13 12.1 0.1 0.22 11.3 0.1 1.4 1 0 0 1 1 1 0 Tetracycline resistance determinant leader peptide NAD_synthase PF02540.17 gi|15679507|ref|NP_276624.1| - 2.6e-99 331.2 0.0 3e-99 331.0 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|15679507|ref|NP_276624.1| - 1.3e-06 27.4 0.0 0.00015 20.7 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|15679507|ref|NP_276624.1| - 3.3e-06 27.0 0.0 5.5e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|15679507|ref|NP_276624.1| - 0.00066 19.2 0.0 0.001 18.6 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Sigma70_r4 PF04545.16 gi|15679507|ref|NP_276624.1| - 0.013 15.0 0.5 19 4.9 0.0 3.6 4 0 0 4 4 4 0 Sigma-70, region 4 Sigma70_r3 PF04539.16 gi|15679507|ref|NP_276624.1| - 0.066 13.3 0.2 2.1 8.5 0.0 2.7 3 0 0 3 3 3 0 Sigma-70 region 3 ArsA_ATPase PF02374.15 gi|15679508|ref|NP_276625.1| - 3e-129 430.6 1.4 3.4e-129 430.4 1.4 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 gi|15679508|ref|NP_276625.1| - 7.3e-17 61.8 0.1 5e-16 59.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|15679508|ref|NP_276625.1| - 2.4e-11 43.6 5.0 3.8e-06 26.6 1.4 2.8 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|15679508|ref|NP_276625.1| - 4.7e-11 42.8 0.0 1.6e-10 41.1 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 gi|15679508|ref|NP_276625.1| - 3.1e-06 26.8 0.0 5e-05 22.9 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.22 gi|15679508|ref|NP_276625.1| - 2.3e-05 24.1 0.4 0.013 15.2 0.5 2.5 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 gi|15679508|ref|NP_276625.1| - 7.8e-05 22.3 0.1 0.0006 19.4 0.0 2.1 1 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ PhoH PF02562.16 gi|15679508|ref|NP_276625.1| - 0.00012 21.6 0.0 0.00024 20.6 0.0 1.5 1 0 0 1 1 1 1 PhoH-like protein AAA_13 PF13166.6 gi|15679508|ref|NP_276625.1| - 0.00031 19.6 0.5 0.00031 19.6 0.5 1.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|15679508|ref|NP_276625.1| - 0.0013 18.3 1.5 0.0039 16.8 0.6 2.2 1 1 1 2 2 2 1 AAA domain MeaB PF03308.16 gi|15679508|ref|NP_276625.1| - 0.0024 16.9 0.1 0.0065 15.5 0.1 1.7 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SecA_DEAD PF07517.14 gi|15679508|ref|NP_276625.1| - 0.0061 15.9 1.3 0.018 14.3 0.1 1.8 1 1 0 2 2 2 1 SecA DEAD-like domain AAA_30 PF13604.6 gi|15679508|ref|NP_276625.1| - 0.0076 16.0 0.1 0.017 14.8 0.1 1.7 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|15679508|ref|NP_276625.1| - 0.0092 15.2 0.2 0.022 13.9 0.2 1.6 1 0 0 1 1 1 1 NB-ARC domain Zeta_toxin PF06414.12 gi|15679508|ref|NP_276625.1| - 0.013 14.8 0.0 0.029 13.6 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 gi|15679508|ref|NP_276625.1| - 0.014 15.8 0.0 0.033 14.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ATPase PF06745.13 gi|15679508|ref|NP_276625.1| - 0.031 13.6 0.3 0.08 12.3 0.0 1.7 2 0 0 2 2 2 0 KaiC Tir_receptor_N PF07490.11 gi|15679508|ref|NP_276625.1| - 0.044 13.6 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus AAA_24 PF13479.6 gi|15679508|ref|NP_276625.1| - 0.046 13.4 0.1 0.13 12.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|15679508|ref|NP_276625.1| - 0.097 13.2 0.1 0.63 10.5 0.0 2.1 2 1 0 2 2 2 0 ABC transporter NTPase_1 PF03266.15 gi|15679508|ref|NP_276625.1| - 0.1 12.5 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 NTPase APS_kinase PF01583.20 gi|15679508|ref|NP_276625.1| - 0.1 12.5 0.0 0.37 10.7 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_26 PF13500.6 gi|15679508|ref|NP_276625.1| - 0.16 11.8 0.1 7.2 6.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|15679508|ref|NP_276625.1| - 0.23 11.2 3.2 0.38 10.5 0.1 2.7 2 1 2 4 4 4 0 Conserved hypothetical ATP binding protein HMD PF03201.16 gi|15679509|ref|NP_276626.1| - 1.3e-42 143.9 2.2 2.5e-42 143.0 2.2 1.5 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.15 gi|15679509|ref|NP_276626.1| - 3.7e-05 24.0 0.4 0.00011 22.3 0.0 1.9 2 1 1 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|15679509|ref|NP_276626.1| - 0.0094 16.5 0.2 0.048 14.2 0.1 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|15679509|ref|NP_276626.1| - 0.037 13.6 0.1 0.1 12.2 0.0 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain HTH_12 PF08461.10 gi|15679509|ref|NP_276626.1| - 0.064 13.2 0.1 0.18 11.8 0.1 1.8 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain SBBP PF06739.11 gi|15679510|ref|NP_276627.1| - 2.3e-56 187.5 61.3 2.4e-10 40.2 3.5 8.8 8 0 0 8 8 8 7 Beta-propeller repeat CARDB PF07705.11 gi|15679510|ref|NP_276627.1| - 4.9e-26 90.9 30.4 0.00012 22.3 0.6 10.3 7 2 2 9 9 9 7 CARDB fn3_3 PF14686.6 gi|15679510|ref|NP_276627.1| - 7.3e-07 28.9 19.7 0.023 14.5 0.3 7.4 7 0 0 7 7 7 3 Polysaccharide lyase family 4, domain II BetaGal_dom4_5 PF13364.6 gi|15679510|ref|NP_276627.1| - 0.0038 17.8 4.4 6.4 7.4 0.0 5.7 4 1 0 5 5 5 1 Beta-galactosidase jelly roll domain ASH PF15780.5 gi|15679510|ref|NP_276627.1| - 0.0051 17.0 0.9 13 6.1 0.0 4.9 6 1 0 6 6 6 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin YbbR PF07949.12 gi|15679510|ref|NP_276627.1| - 9.2 6.7 17.3 0.59 10.5 2.4 6.0 4 2 1 5 5 5 0 YbbR-like protein TP_methylase PF00590.20 gi|15679511|ref|NP_276628.1| - 9.6e-38 130.2 0.0 1.1e-37 130.1 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases MMR_HSR1_C PF08438.10 gi|15679512|ref|NP_276629.1| - 2.3e-40 137.6 0.0 4.3e-40 136.8 0.0 1.5 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|15679512|ref|NP_276629.1| - 6.3e-22 77.8 0.0 7e-21 74.4 0.0 2.6 2 1 1 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|15679512|ref|NP_276629.1| - 6.1e-15 55.0 0.0 1.4e-14 53.8 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|15679512|ref|NP_276629.1| - 7.7e-08 32.0 0.0 3.7e-07 29.8 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|15679512|ref|NP_276629.1| - 0.0031 17.5 0.0 0.0057 16.7 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain E1-E2_ATPase PF00122.20 gi|15679513|ref|NP_276630.1| - 2.7e-51 173.7 1.4 2.7e-51 173.7 1.4 2.8 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|15679513|ref|NP_276630.1| - 3.3e-43 147.5 4.3 3.3e-43 147.5 4.3 2.4 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|15679513|ref|NP_276630.1| - 6.9e-22 78.8 0.5 2.4e-21 77.0 0.5 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|15679513|ref|NP_276630.1| - 2.7e-20 71.8 0.4 6.3e-20 70.6 0.4 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|15679513|ref|NP_276630.1| - 1.6e-19 69.7 0.0 3.1e-19 68.8 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|15679513|ref|NP_276630.1| - 4.2e-07 30.0 3.2 1.1e-06 28.5 2.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15679513|ref|NP_276630.1| - 0.0002 21.8 0.2 0.00046 20.6 0.2 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF2157 PF09925.9 gi|15679513|ref|NP_276630.1| - 0.0035 17.1 7.5 0.054 13.3 0.0 3.1 3 1 0 3 3 3 2 Predicted membrane protein (DUF2157) Glyoxalase PF00903.25 gi|15679513|ref|NP_276630.1| - 0.032 14.4 0.0 0.34 11.1 0.0 2.2 2 0 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCDC-167 PF15188.6 gi|15679514|ref|NP_276631.1| - 0.11 12.8 1.1 9.7 6.6 0.3 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 zinc_ribbon_4 PF13717.6 gi|15679515|ref|NP_276632.1| - 0.012 15.5 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15679515|ref|NP_276632.1| - 0.079 13.1 2.0 0.13 12.5 2.0 1.3 1 0 0 1 1 1 0 Zinc ribbon domain CitMHS PF03600.16 gi|15679516|ref|NP_276633.1| - 0.00052 19.3 0.0 0.00054 19.2 0.0 1.0 1 0 0 1 1 1 1 Citrate transporter Pox_EPC_I2-L1 PF12575.8 gi|15679516|ref|NP_276633.1| - 0.001 19.2 0.4 0.0032 17.7 0.0 1.8 2 0 0 2 2 2 1 Poxvirus entry protein complex L1 and I2 DUF2207 PF09972.9 gi|15679516|ref|NP_276633.1| - 0.053 12.3 0.1 0.055 12.2 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Consortin_C PF15281.6 gi|15679516|ref|NP_276633.1| - 0.11 12.5 0.1 0.2 11.7 0.0 1.4 1 1 0 2 2 2 0 Consortin C-terminus ODV-E18 PF10717.9 gi|15679516|ref|NP_276633.1| - 0.13 12.1 0.5 2.3 8.1 0.2 2.2 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 TrkA_N PF02254.18 gi|15679517|ref|NP_276634.1| - 1.7e-21 76.7 0.2 1.7e-21 76.7 0.2 1.9 3 0 0 3 3 3 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|15679517|ref|NP_276634.1| - 1.1e-16 60.5 10.3 1.7e-16 59.9 10.3 1.3 1 0 0 1 1 1 1 Ion channel TrkA_C PF02080.21 gi|15679517|ref|NP_276634.1| - 3.9e-13 49.0 1.3 1.4e-12 47.3 0.6 2.2 2 0 0 2 2 2 1 TrkA-C domain Ion_trans PF00520.31 gi|15679517|ref|NP_276634.1| - 0.0025 17.1 1.5 0.0043 16.3 1.5 1.3 1 0 0 1 1 1 1 Ion transport protein DUF1206 PF06724.11 gi|15679517|ref|NP_276634.1| - 0.054 13.6 1.5 0.57 10.3 0.0 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1206) SfsA PF03749.13 gi|15679518|ref|NP_276635.1| - 2.1e-43 147.5 0.0 2.7e-43 147.2 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|15679518|ref|NP_276635.1| - 2.3e-21 75.7 0.1 4e-21 74.9 0.1 1.4 1 0 0 1 1 1 1 SfsA N-terminal OB domain NERD PF08378.11 gi|15679518|ref|NP_276635.1| - 0.0045 17.4 0.0 0.015 15.7 0.0 1.8 1 1 1 2 2 2 1 Nuclease-related domain Oxidored_nitro PF00148.19 gi|15679519|ref|NP_276636.1| - 8.9e-24 83.9 0.1 1.4e-23 83.3 0.1 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Peptidase_S66C PF17676.1 gi|15679519|ref|NP_276636.1| - 0.0039 17.7 0.2 0.0085 16.6 0.2 1.6 1 1 0 1 1 1 1 LD-carboxypeptidase C-terminal domain PAD_porph PF04371.15 gi|15679519|ref|NP_276636.1| - 0.17 11.1 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 Porphyromonas-type peptidyl-arginine deiminase NTP_transferase PF00483.23 gi|15679520|ref|NP_276637.1| - 1.3e-28 100.2 0.0 3e-28 99.1 0.0 1.5 2 0 0 2 2 2 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15679520|ref|NP_276637.1| - 7.3e-09 36.2 0.0 1.1e-08 35.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Cupin_2 PF07883.11 gi|15679520|ref|NP_276637.1| - 4.7e-08 32.6 0.4 1.2e-07 31.3 0.2 1.8 2 0 0 2 2 2 1 Cupin domain MannoseP_isomer PF01050.18 gi|15679520|ref|NP_276637.1| - 1.2e-07 31.7 0.2 2.6e-07 30.6 0.2 1.5 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.12 gi|15679520|ref|NP_276637.1| - 0.00029 21.0 0.5 0.00051 20.2 0.5 1.3 1 0 0 1 1 1 1 Ectoine synthase AraC_binding PF02311.19 gi|15679520|ref|NP_276637.1| - 0.012 15.5 0.1 0.024 14.6 0.1 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|15679520|ref|NP_276637.1| - 0.073 12.8 0.0 0.27 11.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF861) Ago_PAZ PF18309.1 gi|15679520|ref|NP_276637.1| - 0.29 11.8 0.9 0.59 10.8 0.3 1.8 2 0 0 2 2 2 0 Argonaute PAZ domain GATase PF00117.28 gi|15679521|ref|NP_276638.1| - 4.2e-24 85.4 0.0 5.2e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|15679521|ref|NP_276638.1| - 6e-10 39.3 0.0 1.6e-09 37.9 0.0 1.6 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|15679521|ref|NP_276638.1| - 6.6e-05 22.6 0.0 7.1e-05 22.5 0.0 1.3 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|15679521|ref|NP_276638.1| - 0.0032 17.2 0.5 0.94 9.2 0.0 2.4 3 0 0 3 3 3 2 Peptidase C26 DJ-1_PfpI PF01965.24 gi|15679521|ref|NP_276638.1| - 0.023 14.5 0.0 0.037 13.8 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family AIRS_C PF02769.22 gi|15679522|ref|NP_276639.1| - 5.8e-21 75.2 0.8 5.8e-21 75.2 0.8 1.6 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15679522|ref|NP_276639.1| - 8.9e-08 32.7 1.1 2.2e-07 31.4 1.1 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AMP-binding PF00501.28 gi|15679524|ref|NP_276641.1| - 3.7e-16 58.7 0.0 5e-16 58.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.6 gi|15679524|ref|NP_276641.1| - 0.012 15.6 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 SIS domain TruD PF01142.18 gi|15679525|ref|NP_276642.1| - 8.7e-151 502.4 0.0 9.7e-151 502.3 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF126 PF01989.16 gi|15679526|ref|NP_276643.1| - 4.5e-37 125.7 0.8 5.9e-37 125.3 0.4 1.4 2 0 0 2 2 2 1 Aconitase X swivel domain DUF5518 PF17647.1 gi|15679527|ref|NP_276644.1| - 1.3e-13 51.2 18.6 3e-13 50.0 18.6 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5518) DUF2407_C PF13373.6 gi|15679527|ref|NP_276644.1| - 3.9 7.6 4.5 8.4 6.6 4.5 1.7 1 1 1 2 2 2 0 DUF2407 C-terminal domain Phage_holin_3_6 PF07332.11 gi|15679527|ref|NP_276644.1| - 9.3 6.3 8.6 3.3 7.8 6.0 1.7 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2955 PF11168.8 gi|15679528|ref|NP_276645.1| - 0.13 12.1 0.3 0.13 12.1 0.3 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2955) ATP-synt_8 PF00895.20 gi|15679528|ref|NP_276645.1| - 0.69 10.4 3.8 1.8 9.1 0.9 2.5 2 0 0 2 2 2 0 ATP synthase protein 8 CPBP PF02517.16 gi|15679528|ref|NP_276645.1| - 3.2 8.2 9.9 0.87 10.0 3.5 2.2 1 1 1 2 2 2 0 CPBP intramembrane metalloprotease Class_IIIsignal PF04021.12 gi|15679529|ref|NP_276646.1| - 1.8e-05 24.6 6.6 2.3e-05 24.2 6.6 1.2 1 0 0 1 1 1 1 Class III signal peptide SARAF PF06682.12 gi|15679529|ref|NP_276646.1| - 0.025 14.3 0.0 0.027 14.1 0.0 1.0 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Flp1_like PF16982.5 gi|15679529|ref|NP_276646.1| - 0.058 12.8 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain PMP1_2 PF08114.11 gi|15679529|ref|NP_276646.1| - 0.095 12.5 0.3 0.13 12.0 0.3 1.2 1 0 0 1 1 1 0 ATPase proteolipid family Amidohydro_1 PF01979.20 gi|15679530|ref|NP_276647.1| - 1.4e-63 215.3 0.2 1.8e-63 214.9 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15679530|ref|NP_276647.1| - 6.3e-18 65.5 2.1 3.9e-10 39.8 0.4 2.4 1 1 1 2 2 2 2 Amidohydrolase family E1-E2_ATPase PF00122.20 gi|15679531|ref|NP_276648.1| - 2.4e-57 193.4 0.2 2.4e-57 193.4 0.2 1.9 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|15679531|ref|NP_276648.1| - 2.6e-47 161.8 2.4 2.6e-47 161.8 2.4 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|15679531|ref|NP_276648.1| - 1.4e-34 118.4 0.3 2.5e-16 59.9 0.0 3.0 3 0 0 3 3 3 2 Heavy-metal-associated domain HAD PF12710.7 gi|15679531|ref|NP_276648.1| - 3.1e-05 24.5 0.3 0.00023 21.6 0.0 2.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15679531|ref|NP_276648.1| - 0.00063 19.6 0.5 0.0049 16.6 0.1 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Spore_YhcN_YlaJ PF09580.10 gi|15679531|ref|NP_276648.1| - 0.002 18.3 0.2 0.59 10.2 0.0 2.4 2 0 0 2 2 2 2 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FeS_assembly_P PF01883.19 gi|15679531|ref|NP_276648.1| - 0.009 16.2 0.1 7.5 6.8 0.0 3.0 2 0 0 2 2 2 2 Iron-sulfur cluster assembly protein HAD_2 PF13419.6 gi|15679531|ref|NP_276648.1| - 0.1 12.7 0.0 1.3 9.1 0.0 2.6 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase PolC_DP2 PF03833.13 gi|15679532|ref|NP_276649.1| - 0 1234.0 0.1 0 1230.4 0.1 2.0 1 1 0 1 1 1 1 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 gi|15679532|ref|NP_276649.1| - 0.029 14.3 1.4 7.1 6.7 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbons HypA PF01155.19 gi|15679532|ref|NP_276649.1| - 0.045 13.8 1.5 4.2 7.4 0.2 2.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Yqai PF09466.10 gi|15679532|ref|NP_276649.1| - 0.046 14.0 1.9 0.059 13.7 0.3 2.0 2 0 0 2 2 2 0 Hypothetical protein Yqai Nop10p PF04135.12 gi|15679532|ref|NP_276649.1| - 0.1 12.7 1.8 0.33 11.0 0.3 2.6 3 0 0 3 3 3 0 Nucleolar RNA-binding protein, Nop10p family TackOD1 PF18551.1 gi|15679532|ref|NP_276649.1| - 0.2 11.3 1.7 6.8 6.3 0.9 2.3 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 zinc_ribbon_4 PF13717.6 gi|15679532|ref|NP_276649.1| - 3.8 7.5 9.6 5.6 7.0 1.2 3.5 3 0 0 3 3 3 0 zinc-ribbon domain Lyase_1 PF00206.20 gi|15679533|ref|NP_276650.1| - 7e-54 183.3 0.1 9.1e-54 183.0 0.1 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|15679533|ref|NP_276650.1| - 5e-21 75.0 3.3 1.2e-20 73.8 0.6 3.0 4 0 0 4 4 4 1 Adenylosuccinate lyase C-terminus FumaraseC_C PF10415.9 gi|15679533|ref|NP_276650.1| - 1.1e-05 25.7 0.5 0.00013 22.3 0.0 2.7 2 0 0 2 2 2 1 Fumarase C C-terminus ASL_C PF08328.11 gi|15679533|ref|NP_276650.1| - 0.0021 18.1 0.5 0.011 15.8 0.0 2.3 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminal ASL_C2 PF14698.6 gi|15679533|ref|NP_276650.1| - 0.025 15.3 0.2 0.13 13.0 0.0 2.3 2 0 0 2 2 2 0 Argininosuccinate lyase C-terminal UL41A PF17591.2 gi|15679534|ref|NP_276651.1| - 8.6 6.5 10.8 4.3 7.5 0.1 3.3 3 1 0 3 3 3 0 Herpesvirus UL41A NRDD PF13597.6 gi|15679535|ref|NP_276652.1| - 1.9e-162 542.0 0.0 2.4e-162 541.6 0.0 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase ATP-cone PF03477.16 gi|15679535|ref|NP_276652.1| - 8.2e-16 58.4 1.4 1.6e-07 31.8 0.0 2.7 1 1 1 2 2 2 2 ATP cone domain MecA_N PF05223.11 gi|15679535|ref|NP_276652.1| - 0.1 12.9 0.1 0.24 11.7 0.1 1.5 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain PIN_12 PF16289.5 gi|15679535|ref|NP_276652.1| - 0.23 11.9 1.8 0.49 10.9 1.8 1.5 1 0 0 1 1 1 0 PIN domain tRNA-synt_1f PF01921.18 gi|15679538|ref|NP_276655.1| - 7.4e-133 442.9 0.0 1.6e-132 441.8 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|15679538|ref|NP_276655.1| - 5.8e-05 22.0 0.0 0.00065 18.6 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (M) Gmx_para_CXXCG PF09535.10 gi|15679538|ref|NP_276655.1| - 0.099 11.9 0.0 15 4.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (Gmx_para_CXXCG) IL2 PF00715.17 gi|15679538|ref|NP_276655.1| - 0.37 10.7 1.9 0.67 9.9 1.9 1.3 1 0 0 1 1 1 0 Interleukin 2 ThiC_Rad_SAM PF01964.18 gi|15679539|ref|NP_276656.1| - 9.8e-182 604.4 0.8 1.1e-181 604.2 0.8 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family PfkB PF00294.24 gi|15679540|ref|NP_276657.1| - 1.3e-63 215.2 0.0 1.4e-63 215.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HTH_1 PF00126.27 gi|15679541|ref|NP_276658.1| - 6.1e-09 35.7 0.6 1.1e-08 34.9 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 gi|15679541|ref|NP_276658.1| - 7.6e-05 22.4 0.0 0.00016 21.4 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_8 PF02954.19 gi|15679541|ref|NP_276658.1| - 0.076 12.8 0.1 0.16 11.8 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_psq PF05225.16 gi|15679541|ref|NP_276658.1| - 0.082 12.7 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 helix-turn-helix, Psq domain HTH_29 PF13551.6 gi|15679541|ref|NP_276658.1| - 0.11 12.6 0.1 0.28 11.2 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn helix SIS PF01380.22 gi|15679542|ref|NP_276659.1| - 7.2e-19 67.9 0.2 1.1e-18 67.4 0.2 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|15679542|ref|NP_276659.1| - 1.1e-11 44.9 1.8 9e-09 35.5 0.7 2.3 1 1 1 2 2 2 2 SIS domain PRMT5 PF05185.16 gi|15679542|ref|NP_276659.1| - 0.02 14.7 0.1 1.3 8.9 0.0 2.2 1 1 1 2 2 2 0 PRMT5 arginine-N-methyltransferase SMN PF06003.12 gi|15679542|ref|NP_276659.1| - 0.23 10.7 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) FdhD-NarQ PF02634.15 gi|15679543|ref|NP_276660.1| - 1.6e-62 211.3 0.0 1.9e-62 211.0 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family 2Fe-2S_thioredx PF01257.19 gi|15679544|ref|NP_276661.1| - 9.1e-50 168.3 0.0 1.1e-49 168.0 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin Phage_AlpA PF05930.12 gi|15679544|ref|NP_276661.1| - 0.18 11.6 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) Complex1_51K PF01512.17 gi|15679545|ref|NP_276662.1| - 1.6e-48 164.4 0.0 4.9e-48 162.9 0.0 1.8 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 gi|15679545|ref|NP_276662.1| - 1.6e-30 105.0 0.0 1.6e-30 105.0 0.0 2.7 3 0 0 3 3 3 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Fer4 PF00037.27 gi|15679545|ref|NP_276662.1| - 5.6e-10 38.6 19.8 1.2e-06 28.1 5.2 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain SLBB PF10531.9 gi|15679545|ref|NP_276662.1| - 4.4e-09 36.1 0.8 9.5e-09 35.0 0.8 1.6 1 0 0 1 1 1 1 SLBB domain Fer4_9 PF13187.6 gi|15679545|ref|NP_276662.1| - 3.3e-07 30.4 11.2 3.3e-07 30.4 11.2 2.9 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679545|ref|NP_276662.1| - 6.1e-06 26.1 5.7 6.1e-06 26.1 5.7 4.4 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679545|ref|NP_276662.1| - 8.7e-06 25.8 12.3 8.7e-06 25.8 12.3 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679545|ref|NP_276662.1| - 1.8e-05 25.2 11.7 1.8e-05 25.2 11.7 3.0 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679545|ref|NP_276662.1| - 8.5e-05 22.4 2.1 8.5e-05 22.4 2.1 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679545|ref|NP_276662.1| - 0.0001 22.3 12.4 0.0001 22.3 12.4 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679545|ref|NP_276662.1| - 0.0071 17.3 1.7 0.0071 17.3 1.7 3.1 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|15679545|ref|NP_276662.1| - 0.089 13.5 10.4 0.93 10.3 1.1 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15679545|ref|NP_276662.1| - 0.53 10.9 14.8 3.8 8.1 4.8 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Radical_SAM PF04055.21 gi|15679546|ref|NP_276663.1| - 1.7e-31 109.9 0.4 3.3e-31 108.9 0.1 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|15679546|ref|NP_276663.1| - 4.2e-26 91.4 0.2 4.2e-26 91.4 0.2 1.6 2 0 0 2 2 2 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|15679546|ref|NP_276663.1| - 1.3e-07 32.0 0.0 2.5e-07 31.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679546|ref|NP_276663.1| - 8.1e-07 29.2 0.0 1.8e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain NIR_SIR_ferr PF03460.17 gi|15679546|ref|NP_276663.1| - 0.16 11.8 0.0 0.89 9.5 0.0 2.3 2 0 0 2 2 2 0 Nitrite/Sulfite reductase ferredoxin-like half domain MobB PF03205.14 gi|15679547|ref|NP_276664.1| - 2.4e-26 92.2 0.2 3.5e-26 91.7 0.2 1.2 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B FeS PF04060.13 gi|15679547|ref|NP_276664.1| - 7.1e-09 35.2 0.4 1.4e-08 34.2 0.4 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster NTPase_1 PF03266.15 gi|15679547|ref|NP_276664.1| - 3.1e-06 27.2 0.2 2.8e-05 24.1 0.1 2.1 2 0 0 2 2 2 1 NTPase MeaB PF03308.16 gi|15679547|ref|NP_276664.1| - 9.6e-05 21.5 0.5 0.00014 20.9 0.5 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 gi|15679547|ref|NP_276664.1| - 0.002 18.2 0.3 0.0053 16.8 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15679547|ref|NP_276664.1| - 0.021 15.4 0.1 0.036 14.6 0.1 1.5 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|15679547|ref|NP_276664.1| - 0.024 14.6 0.0 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea GTP_EFTU PF00009.27 gi|15679547|ref|NP_276664.1| - 0.025 14.1 0.5 0.037 13.6 0.5 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_26 PF13500.6 gi|15679547|ref|NP_276664.1| - 0.035 13.9 0.6 0.49 10.2 0.6 2.1 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 gi|15679547|ref|NP_276664.1| - 0.052 13.3 0.1 0.077 12.7 0.1 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.6 gi|15679547|ref|NP_276664.1| - 0.11 12.6 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|15679547|ref|NP_276664.1| - 0.14 11.8 0.3 0.22 11.2 0.3 1.3 1 0 0 1 1 1 0 Thymidylate kinase AAA_16 PF13191.6 gi|15679547|ref|NP_276664.1| - 0.15 12.5 0.3 0.45 10.9 0.3 1.8 2 1 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|15679547|ref|NP_276664.1| - 0.16 11.7 0.5 0.27 10.9 0.5 1.3 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|15679547|ref|NP_276664.1| - 0.22 10.9 0.0 0.31 10.4 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Molybdopterin PF00384.22 gi|15679548|ref|NP_276665.1| - 4.8e-98 329.0 0.0 6.6e-98 328.5 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|15679548|ref|NP_276665.1| - 5.2e-29 100.5 0.0 9.4e-29 99.7 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|15679548|ref|NP_276665.1| - 2.3e-21 75.5 0.6 6.9e-21 74.0 0.6 1.9 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4_7 PF12838.7 gi|15679548|ref|NP_276665.1| - 2e-12 47.5 2.1 6.7e-09 36.2 8.0 3.3 3 1 0 3 3 3 1 4Fe-4S dicluster domain NADH-G_4Fe-4S_3 PF10588.9 gi|15679548|ref|NP_276665.1| - 4.4e-12 45.3 0.1 4.4e-12 45.3 0.1 2.3 2 0 0 2 2 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 gi|15679548|ref|NP_276665.1| - 3.9e-11 42.8 0.1 2.5e-10 40.3 0.1 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 gi|15679548|ref|NP_276665.1| - 2e-10 40.0 19.6 9.3e-07 28.4 3.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679548|ref|NP_276665.1| - 3.6e-10 39.8 7.2 3.6e-10 39.8 7.2 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679548|ref|NP_276665.1| - 2.8e-07 30.3 10.9 1.5e-05 24.8 2.4 3.8 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679548|ref|NP_276665.1| - 2.6e-06 27.5 8.8 2.6e-06 27.5 8.8 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679548|ref|NP_276665.1| - 7.6e-06 26.3 6.0 7.6e-06 26.3 6.0 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer2 PF00111.27 gi|15679548|ref|NP_276665.1| - 9.6e-06 25.5 0.1 5e-05 23.2 0.1 2.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_10 PF13237.6 gi|15679548|ref|NP_276665.1| - 2.1e-05 24.5 17.2 0.011 15.8 6.9 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679548|ref|NP_276665.1| - 0.00018 22.4 11.4 0.037 15.0 7.4 2.9 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|15679548|ref|NP_276665.1| - 0.00021 21.7 12.1 0.045 14.3 0.2 3.1 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679548|ref|NP_276665.1| - 0.0081 17.0 5.1 0.29 12.0 0.8 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679548|ref|NP_276665.1| - 0.17 12.1 14.0 0.84 9.8 4.9 2.7 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679548|ref|NP_276665.1| - 0.57 10.8 11.8 3.5 8.3 3.1 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15679548|ref|NP_276665.1| - 3.5 8.5 12.6 61 4.5 11.6 2.9 2 1 0 2 2 1 0 4Fe-4S single cluster domain Fer4 PF00037.27 gi|15679549|ref|NP_276666.1| - 3.5e-09 36.1 16.7 9.5e-05 22.0 5.6 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679549|ref|NP_276666.1| - 4.6e-08 33.5 11.0 2.3e-06 28.1 10.4 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679549|ref|NP_276666.1| - 1.9e-07 31.1 25.0 1.7e-06 28.1 14.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain HTH_3 PF01381.22 gi|15679549|ref|NP_276666.1| - 3.2e-07 30.3 0.0 5e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 gi|15679549|ref|NP_276666.1| - 1.4e-06 27.9 0.0 2.6e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Fer4_9 PF13187.6 gi|15679549|ref|NP_276666.1| - 7.5e-06 26.0 26.3 5.8e-05 23.2 13.7 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain HTH_38 PF13936.6 gi|15679549|ref|NP_276666.1| - 1e-05 25.2 0.0 2e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|15679549|ref|NP_276666.1| - 5.8e-05 23.1 0.0 9.7e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Fer4_16 PF13484.6 gi|15679549|ref|NP_276666.1| - 6.6e-05 23.8 14.8 0.018 16.0 2.3 2.5 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|15679549|ref|NP_276666.1| - 0.00013 22.4 12.1 0.011 16.2 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain HTH_31 PF13560.6 gi|15679549|ref|NP_276666.1| - 0.00015 22.0 0.0 0.00025 21.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|15679549|ref|NP_276666.1| - 0.00024 20.6 0.0 0.00037 20.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fer4_10 PF13237.6 gi|15679549|ref|NP_276666.1| - 0.00041 20.4 14.7 0.021 14.9 2.2 2.6 2 1 1 3 3 3 3 4Fe-4S dicluster domain HTH_5 PF01022.20 gi|15679549|ref|NP_276666.1| - 0.00065 19.5 0.0 0.0016 18.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 gi|15679549|ref|NP_276666.1| - 0.00068 19.6 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_37 PF13744.6 gi|15679549|ref|NP_276666.1| - 0.00088 19.2 0.1 0.0026 17.7 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain Fer4_6 PF12837.7 gi|15679549|ref|NP_276666.1| - 0.0011 18.9 2.6 0.0011 18.9 2.6 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Sigma70_r4_2 PF08281.12 gi|15679549|ref|NP_276666.1| - 0.0013 18.4 0.0 0.0023 17.6 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Fer4_4 PF12800.7 gi|15679549|ref|NP_276666.1| - 0.0013 19.1 16.2 0.0086 16.5 2.5 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain TnsD PF15978.5 gi|15679549|ref|NP_276666.1| - 0.0017 17.4 0.3 0.0022 17.0 0.3 1.1 1 0 0 1 1 1 1 Tn7-like transposition protein D HTH_IclR PF09339.10 gi|15679549|ref|NP_276666.1| - 0.0024 17.6 0.0 0.004 16.9 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Fer4_2 PF12797.7 gi|15679549|ref|NP_276666.1| - 0.0036 17.3 18.9 0.086 13.0 4.7 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain HTH_7 PF02796.15 gi|15679549|ref|NP_276666.1| - 0.004 17.2 0.1 0.0059 16.6 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase CENP-B_N PF04218.13 gi|15679549|ref|NP_276666.1| - 0.0064 16.1 0.0 0.013 15.1 0.0 1.5 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain Terminase_5 PF06056.12 gi|15679549|ref|NP_276666.1| - 0.0067 16.3 0.0 0.014 15.3 0.0 1.5 1 1 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_40 PF14493.6 gi|15679549|ref|NP_276666.1| - 0.0074 16.7 0.1 0.015 15.7 0.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain DUF739 PF05339.11 gi|15679549|ref|NP_276666.1| - 0.011 15.9 0.3 0.025 14.7 0.1 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF739) DUF2738 PF10927.8 gi|15679549|ref|NP_276666.1| - 0.011 14.8 0.0 0.015 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) MarR PF01047.22 gi|15679549|ref|NP_276666.1| - 0.014 15.4 0.0 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_19 PF12844.7 gi|15679549|ref|NP_276666.1| - 0.017 15.1 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Fer4_8 PF13183.6 gi|15679549|ref|NP_276666.1| - 0.027 14.9 1.1 0.027 14.9 1.1 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain RepB PF07506.11 gi|15679549|ref|NP_276666.1| - 0.032 14.3 0.0 0.053 13.6 0.0 1.4 1 1 0 1 1 1 0 RepB plasmid partitioning protein GerE PF00196.19 gi|15679549|ref|NP_276666.1| - 0.043 13.4 0.1 0.1 12.2 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Fer4_18 PF13746.6 gi|15679549|ref|NP_276666.1| - 0.044 14.0 13.5 0.33 11.2 13.4 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Phage_NinH PF06322.11 gi|15679549|ref|NP_276666.1| - 0.048 13.6 0.2 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 Phage NinH protein Aminotran_3 PF00202.21 gi|15679549|ref|NP_276666.1| - 0.057 12.1 0.0 0.067 11.8 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-III HTH_Crp_2 PF13545.6 gi|15679549|ref|NP_276666.1| - 0.07 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|15679549|ref|NP_276666.1| - 0.071 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2285 PF10074.9 gi|15679549|ref|NP_276666.1| - 0.076 13.7 0.0 0.12 13.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) HTH_11 PF08279.12 gi|15679549|ref|NP_276666.1| - 0.079 12.9 0.3 0.27 11.2 0.0 1.9 2 0 0 2 2 2 0 HTH domain HTH_36 PF13730.6 gi|15679549|ref|NP_276666.1| - 0.098 12.6 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fer4_22 PF17179.4 gi|15679549|ref|NP_276666.1| - 0.11 13.4 15.8 0.36 11.7 5.0 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain NUMOD1 PF07453.13 gi|15679549|ref|NP_276666.1| - 0.13 12.5 0.1 0.22 11.8 0.1 1.4 1 0 0 1 1 1 0 NUMOD1 domain Fer4_13 PF13370.6 gi|15679549|ref|NP_276666.1| - 0.34 11.5 14.8 0.75 10.4 2.0 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15679549|ref|NP_276666.1| - 1.7 9.8 21.8 0.25 12.4 4.0 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|15679550|ref|NP_276667.1| - 1.4e-54 179.9 96.6 1.6e-08 34.0 5.9 8.7 9 0 0 9 9 9 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679550|ref|NP_276667.1| - 4.3e-38 129.7 73.1 2.6e-12 47.1 9.4 5.0 3 1 2 5 5 5 5 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679550|ref|NP_276667.1| - 3.4e-29 99.7 99.4 3.6e-06 26.8 5.7 8.9 9 0 0 9 9 9 7 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679550|ref|NP_276667.1| - 4.7e-28 97.1 79.8 3.4e-08 33.5 14.0 7.8 5 3 3 8 8 8 8 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679550|ref|NP_276667.1| - 8.5e-27 93.1 78.9 1e-08 35.2 14.6 6.5 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679550|ref|NP_276667.1| - 2.4e-25 88.5 72.5 2.3e-07 30.8 10.3 5.7 2 2 5 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679550|ref|NP_276667.1| - 6.4e-25 87.9 71.6 0.0003 21.7 14.3 8.1 6 2 2 8 8 8 8 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|15679550|ref|NP_276667.1| - 3.4e-23 80.3 81.2 0.00012 22.0 2.8 8.7 9 0 0 9 9 9 7 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679550|ref|NP_276667.1| - 3.6e-18 65.8 62.1 1.9e-05 25.0 10.0 6.4 5 1 0 6 6 6 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679550|ref|NP_276667.1| - 4e-09 36.9 82.4 0.0073 16.8 11.4 6.9 3 3 5 8 8 8 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679550|ref|NP_276667.1| - 5.6e-09 35.8 95.8 0.0057 17.1 5.0 9.0 8 1 0 9 9 9 7 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15679550|ref|NP_276667.1| - 3.3e-08 33.9 88.3 0.037 14.6 3.1 9.1 8 1 1 9 9 9 7 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15679550|ref|NP_276667.1| - 1.1e-05 26.0 108.5 0.022 15.7 4.0 9.2 9 0 0 9 9 9 5 4Fe-4S binding domain ETF_QO PF05187.13 gi|15679550|ref|NP_276667.1| - 0.0055 16.8 51.1 0.23 11.6 6.5 6.1 1 1 5 6 6 6 5 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S zinc_ribbon_2 PF13240.6 gi|15679550|ref|NP_276667.1| - 0.1 12.4 0.1 0.1 12.4 0.1 6.6 8 1 0 8 8 5 0 zinc-ribbon domain Fer4_22 PF17179.4 gi|15679550|ref|NP_276667.1| - 1.9 9.4 75.4 1.2 10.0 0.4 8.2 6 2 2 8 8 8 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15679551|ref|NP_276668.1| - 2.9e-17 61.7 14.8 1.5e-08 34.1 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679551|ref|NP_276668.1| - 1.7e-13 50.9 18.0 1.3e-10 41.7 8.4 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679551|ref|NP_276668.1| - 6.1e-12 45.5 22.9 8.9e-09 35.3 12.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679551|ref|NP_276668.1| - 2.1e-11 44.6 7.2 4.2e-05 24.4 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|15679551|ref|NP_276668.1| - 5.4e-11 42.1 15.5 9.9e-06 25.4 4.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679551|ref|NP_276668.1| - 9.5e-10 38.5 19.8 1.8e-07 31.2 9.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679551|ref|NP_276668.1| - 5.9e-07 29.5 10.7 0.0035 17.4 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679551|ref|NP_276668.1| - 8.6e-07 28.7 13.6 0.0029 17.6 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15679551|ref|NP_276668.1| - 3.3e-06 27.6 19.3 0.0085 17.0 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679551|ref|NP_276668.1| - 7.7e-06 26.3 20.3 4.1e-05 23.9 9.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679551|ref|NP_276668.1| - 1e-05 25.6 12.9 0.00087 19.6 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15679551|ref|NP_276668.1| - 0.00011 22.6 11.4 0.0026 18.3 11.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679551|ref|NP_276668.1| - 0.023 15.5 8.1 0.39 11.6 1.4 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679551|ref|NP_276668.1| - 0.5 11.0 13.9 2.6 8.6 1.8 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15679551|ref|NP_276668.1| - 3.5 8.4 16.3 3.6e+02 2.0 16.3 3.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|15679551|ref|NP_276668.1| - 5.6 7.2 12.0 2.1 8.6 2.1 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Molydop_binding PF01568.21 gi|15679552|ref|NP_276669.1| - 1.8e-19 69.8 0.0 2.1e-19 69.6 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF1905 PF08922.11 gi|15679552|ref|NP_276669.1| - 0.0017 18.4 0.1 0.0041 17.2 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1905) CDC48_N PF02359.18 gi|15679552|ref|NP_276669.1| - 0.0071 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain Amidohydro_3 PF07969.11 gi|15679553|ref|NP_276670.1| - 5.2e-104 349.4 0.7 6.3e-104 349.1 0.7 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|15679553|ref|NP_276670.1| - 2.7e-07 30.2 0.0 0.00077 18.9 0.0 2.8 3 0 0 3 3 3 2 Amidohydrolase family GXGXG PF01493.19 gi|15679554|ref|NP_276671.1| - 6.6e-10 38.9 39.1 4.7e-07 29.6 16.7 3.3 1 1 1 2 2 2 2 GXGXG motif Molybdopterin PF00384.22 gi|15679555|ref|NP_276672.1| - 1.6e-16 60.3 0.0 6.4e-16 58.3 0.0 1.9 1 1 0 1 1 1 1 Molybdopterin oxidoreductase PcrB PF01884.17 gi|15679555|ref|NP_276672.1| - 0.00042 19.8 0.0 0.0017 17.9 0.0 1.9 2 0 0 2 2 2 1 PcrB family TPP_enzyme_M PF00205.22 gi|15679555|ref|NP_276672.1| - 0.0014 18.4 0.1 2.2 8.0 0.0 3.2 3 0 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Fer4_NifH PF00142.18 gi|15679556|ref|NP_276673.1| - 2.2e-128 427.4 4.3 2.5e-128 427.2 4.3 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|15679556|ref|NP_276673.1| - 1e-09 38.5 0.0 1.8e-09 37.8 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15679556|ref|NP_276673.1| - 1.2e-05 25.3 0.5 6.7e-05 22.9 0.1 2.1 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|15679556|ref|NP_276673.1| - 2.7e-05 23.7 1.1 0.0028 17.2 0.2 2.2 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|15679556|ref|NP_276673.1| - 0.0043 16.3 1.7 0.0063 15.7 0.1 2.0 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|15679556|ref|NP_276673.1| - 0.019 14.7 0.1 0.028 14.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain MHC_II_beta PF00969.19 gi|15679556|ref|NP_276673.1| - 0.11 12.6 0.0 0.23 11.6 0.0 1.5 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain P-II PF00543.22 gi|15679557|ref|NP_276674.1| - 7.6e-34 116.4 0.1 8.6e-34 116.2 0.1 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II CdAMP_rec PF06153.11 gi|15679557|ref|NP_276674.1| - 0.00026 21.2 0.5 0.3 11.3 0.0 2.7 2 1 1 3 3 3 2 Cyclic-di-AMP receptor DUF2179 PF10035.9 gi|15679557|ref|NP_276674.1| - 0.046 13.5 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) P-II PF00543.22 gi|15679558|ref|NP_276675.1| - 5.5e-34 116.8 0.5 7.5e-34 116.4 0.5 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.19 gi|15679559|ref|NP_276676.1| - 2.2e-121 405.4 0.0 2.5e-121 405.2 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|15679560|ref|NP_276677.1| - 1.8e-118 395.8 0.0 2e-118 395.6 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|15679561|ref|NP_276678.1| - 1.2e-117 393.1 0.0 1.3e-117 392.9 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase NDUFB11 PF17250.2 gi|15679561|ref|NP_276678.1| - 0.015 15.9 0.0 2.2 9.0 0.0 2.4 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase 11 kDa subunit TPP_enzyme_N PF02776.18 gi|15679561|ref|NP_276678.1| - 0.073 12.7 0.0 0.29 10.7 0.0 1.9 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Oxidored_nitro PF00148.19 gi|15679562|ref|NP_276679.1| - 1.3e-120 402.8 0.0 1.5e-120 402.6 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Molybdopterin PF00384.22 gi|15679563|ref|NP_276680.1| - 7.8e-55 186.6 0.0 1.5e-54 185.6 0.0 1.4 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 gi|15679563|ref|NP_276680.1| - 2.4e-07 30.6 1.3 5.9e-07 29.4 1.3 1.7 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 gi|15679563|ref|NP_276680.1| - 0.00023 21.2 0.0 0.0005 20.1 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF2097 PF09870.9 gi|15679564|ref|NP_276681.1| - 1.4e-27 95.7 0.4 1.6e-27 95.5 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2097) NRD1_2 PF01995.16 gi|15679565|ref|NP_276682.1| - 2.5e-155 514.7 0.0 4.5e-80 268.4 0.0 2.1 2 0 0 2 2 2 2 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|15679565|ref|NP_276682.1| - 1.7e-31 108.0 2.6 4.6e-31 106.6 2.6 1.8 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.6 gi|15679565|ref|NP_276682.1| - 0.0089 16.1 2.2 0.015 15.5 0.2 2.3 2 0 0 2 2 2 1 HTH-like domain Ribosomal_S11 PF00411.19 gi|15679565|ref|NP_276682.1| - 0.011 16.2 0.0 0.52 10.7 0.0 2.5 2 0 0 2 2 2 0 Ribosomal protein S11 Gln-synt_C PF00120.24 gi|15679566|ref|NP_276683.1| - 7.5e-139 462.5 0.0 8.8e-139 462.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|15679566|ref|NP_276683.1| - 4e-31 106.6 0.0 7.6e-31 105.7 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain ThiF PF00899.21 gi|15679567|ref|NP_276684.1| - 3.7e-49 167.3 0.0 4.7e-49 167.0 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 gi|15679567|ref|NP_276684.1| - 0.00022 21.5 0.2 0.0011 19.3 0.2 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|15679567|ref|NP_276684.1| - 0.005 16.2 0.0 0.0099 15.3 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|15679567|ref|NP_276684.1| - 0.078 13.0 0.0 0.16 12.1 0.0 1.6 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|15679567|ref|NP_276684.1| - 0.16 11.5 0.8 0.33 10.5 0.7 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF2099 PF09872.9 gi|15679569|ref|NP_276686.1| - 1.3e-109 365.4 1.1 1.5e-109 365.2 1.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) CBS PF00571.28 gi|15679570|ref|NP_276687.1| - 4.4e-27 94.3 5.3 3.1e-14 53.1 0.5 2.1 2 0 0 2 2 2 2 CBS domain CDC48_2 PF02933.17 gi|15679570|ref|NP_276687.1| - 0.00013 21.6 0.0 0.00025 20.8 0.0 1.4 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 Peptidase_S55 PF05580.12 gi|15679570|ref|NP_276687.1| - 0.03 14.3 0.1 3.4 7.6 0.0 2.1 2 0 0 2 2 2 0 SpoIVB peptidase S55 ThiC_Rad_SAM PF01964.18 gi|15679571|ref|NP_276688.1| - 6.1e-191 634.7 0.1 6.9e-191 634.5 0.1 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family DUF237 PF03072.14 gi|15679571|ref|NP_276688.1| - 0.047 13.7 0.0 2.5 8.1 0.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF237) Glutaredoxin PF00462.24 gi|15679572|ref|NP_276689.1| - 4.3e-13 49.3 0.0 5.5e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 gi|15679572|ref|NP_276689.1| - 7.3e-07 29.4 0.0 8.7e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 gi|15679572|ref|NP_276689.1| - 6.5e-06 26.5 0.0 8e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 gi|15679572|ref|NP_276689.1| - 0.0028 18.0 0.0 0.0035 17.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.6 gi|15679572|ref|NP_276689.1| - 0.0037 17.3 0.0 0.0098 15.9 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin domain FeThRed_B PF02943.15 gi|15679573|ref|NP_276690.1| - 1.3e-24 86.2 0.4 1.7e-24 85.8 0.4 1.1 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain Vpu PF00558.19 gi|15679573|ref|NP_276690.1| - 0.11 12.3 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 Vpu protein DUF1724 PF08350.10 gi|15679574|ref|NP_276691.1| - 3.8e-14 52.6 0.1 6.9e-14 51.7 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|15679574|ref|NP_276691.1| - 0.00094 19.0 0.5 0.0019 18.0 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family NUMOD4 PF07463.11 gi|15679574|ref|NP_276691.1| - 0.0099 16.1 0.2 0.16 12.2 0.1 2.3 2 0 0 2 2 2 1 NUMOD4 motif HTH_20 PF12840.7 gi|15679574|ref|NP_276691.1| - 0.012 15.6 0.0 0.076 13.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|15679574|ref|NP_276691.1| - 0.042 13.8 0.1 0.082 12.8 0.1 1.4 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|15679574|ref|NP_276691.1| - 0.063 13.2 0.2 0.18 11.7 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_47 PF16221.5 gi|15679574|ref|NP_276691.1| - 0.14 11.8 0.0 0.33 10.5 0.0 1.6 1 0 0 1 1 1 0 winged helix-turn-helix DNA_ligase_A_M PF01068.21 gi|15679575|ref|NP_276692.1| - 4.7e-58 196.2 0.0 8.5e-58 195.4 0.0 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|15679575|ref|NP_276692.1| - 8.8e-37 127.1 2.6 1.3e-36 126.5 1.1 2.1 2 1 1 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|15679575|ref|NP_276692.1| - 2e-18 66.8 0.0 4.5e-18 65.7 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region tRNA_anti-codon PF01336.25 gi|15679576|ref|NP_276693.1| - 2e-13 50.1 0.1 3.3e-13 49.4 0.1 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|15679576|ref|NP_276693.1| - 1.7e-09 37.8 0.0 2.1e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF4131 PF13567.6 gi|15679576|ref|NP_276693.1| - 0.0015 18.2 0.0 0.0028 17.3 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4131) tRNA_anti-like PF12869.7 gi|15679576|ref|NP_276693.1| - 0.0042 16.7 0.2 0.0057 16.3 0.2 1.1 1 0 0 1 1 1 1 tRNA_anti-like CDC24_OB3 PF17244.2 gi|15679576|ref|NP_276693.1| - 0.028 14.1 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Stn1 PF10451.9 gi|15679576|ref|NP_276693.1| - 0.05 12.5 0.0 0.068 12.1 0.0 1.1 1 0 0 1 1 1 0 Telomere regulation protein Stn1 Pro_CA PF00484.19 gi|15679577|ref|NP_276694.1| - 2.5e-19 70.1 0.6 1.4e-18 67.7 0.6 1.9 1 1 0 1 1 1 1 Carbonic anhydrase PMT_2 PF13231.6 gi|15679578|ref|NP_276695.1| - 0.013 15.8 21.2 0.013 15.8 21.2 2.7 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase PGM_PMM_I PF02878.16 gi|15679579|ref|NP_276696.1| - 1.8e-43 147.6 0.0 4.1e-43 146.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|15679579|ref|NP_276696.1| - 1.1e-31 109.5 0.0 1.9e-31 108.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|15679579|ref|NP_276696.1| - 5.3e-27 94.3 0.0 1.1e-26 93.3 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|15679579|ref|NP_276696.1| - 9.8e-12 44.9 0.1 1e-10 41.6 0.0 2.4 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain TrbI_Ftype PF09677.10 gi|15679579|ref|NP_276696.1| - 0.15 12.4 0.0 0.3 11.4 0.0 1.5 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) TPR_1 PF00515.28 gi|15679580|ref|NP_276697.1| - 2.2e-62 204.5 2.3 1.8e-10 40.2 0.1 7.2 6 1 1 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15679580|ref|NP_276697.1| - 1.5e-55 180.9 4.4 4.4e-08 32.6 0.1 7.3 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15679580|ref|NP_276697.1| - 1.9e-48 161.9 0.8 2.9e-09 36.5 0.0 7.3 2 2 5 7 7 7 7 TPR repeat TPR_8 PF13181.6 gi|15679580|ref|NP_276697.1| - 1.3e-44 146.7 0.3 1.4e-06 28.0 0.0 7.3 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15679580|ref|NP_276697.1| - 9.3e-34 115.8 0.6 1.8e-08 34.9 0.0 4.3 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15679580|ref|NP_276697.1| - 5.7e-33 110.9 5.1 1.1e-06 28.6 0.0 6.6 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15679580|ref|NP_276697.1| - 5.4e-31 104.6 9.3 0.00011 22.8 0.0 7.4 1 1 6 7 7 7 7 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15679580|ref|NP_276697.1| - 1.2e-29 102.4 18.2 1.9e-08 34.5 1.0 5.6 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15679580|ref|NP_276697.1| - 8.2e-29 99.9 4.0 3.2e-09 37.2 0.0 5.1 2 2 3 6 6 6 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15679580|ref|NP_276697.1| - 6.3e-26 88.5 3.8 0.0053 16.7 0.1 7.4 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15679580|ref|NP_276697.1| - 7e-21 74.2 9.0 1.2e-06 28.5 0.3 4.4 1 1 1 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15679580|ref|NP_276697.1| - 2.3e-13 50.2 0.0 0.0017 18.5 0.0 3.8 1 1 3 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 gi|15679580|ref|NP_276697.1| - 3.5e-13 49.4 1.9 1.1e-07 31.3 0.8 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15679580|ref|NP_276697.1| - 3.5e-13 48.9 21.1 0.0058 16.5 0.2 6.9 7 1 1 8 8 7 4 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15679580|ref|NP_276697.1| - 5.9e-09 36.0 2.9 8.2 7.3 0.0 6.5 6 0 0 6 6 6 0 Tetratricopeptide repeat MIT PF04212.18 gi|15679580|ref|NP_276697.1| - 7.3e-09 35.6 1.1 6.5 6.9 0.1 6.2 5 1 0 6 6 6 0 MIT (microtubule interacting and transport) domain DUF3856 PF12968.7 gi|15679580|ref|NP_276697.1| - 8.5e-09 35.6 3.2 0.83 9.7 0.1 5.7 2 2 3 5 5 5 2 Domain of Unknown Function (DUF3856) BTAD PF03704.17 gi|15679580|ref|NP_276697.1| - 1e-08 35.7 10.3 0.0064 16.9 0.2 3.6 2 2 1 3 3 3 3 Bacterial transcriptional activator domain NARP1 PF12569.8 gi|15679580|ref|NP_276697.1| - 4.1e-08 32.6 1.7 0.0074 15.3 0.2 4.2 1 1 3 4 4 4 2 NMDA receptor-regulated protein 1 SHNi-TPR PF10516.9 gi|15679580|ref|NP_276697.1| - 1e-07 31.3 5.4 1.2 8.7 0.0 6.1 6 0 0 6 6 6 3 SHNi-TPR TPR_21 PF09976.9 gi|15679580|ref|NP_276697.1| - 2.4e-07 30.7 0.0 2.3 7.9 0.0 5.6 1 1 5 6 6 6 1 Tetratricopeptide repeat-like domain TPR_MalT PF17874.1 gi|15679580|ref|NP_276697.1| - 3.2e-07 30.0 0.0 4e-05 23.2 0.2 2.9 2 1 0 2 2 2 1 MalT-like TPR region Fis1_TPR_C PF14853.6 gi|15679580|ref|NP_276697.1| - 3.6e-07 30.1 9.8 0.32 11.1 0.0 6.1 7 0 0 7 7 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.14 gi|15679580|ref|NP_276697.1| - 3.5e-06 27.1 4.8 1.2 10.0 0.0 5.5 6 0 0 6 6 5 1 Tetratricopeptide repeat ASCH PF04266.14 gi|15679580|ref|NP_276697.1| - 1.6e-05 25.4 0.2 3.1e-05 24.5 0.2 1.5 1 0 0 1 1 1 1 ASCH domain ChAPs PF09295.10 gi|15679580|ref|NP_276697.1| - 0.00021 20.4 0.0 0.014 14.4 0.1 2.3 1 1 1 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) Coatomer_E PF04733.14 gi|15679580|ref|NP_276697.1| - 0.00036 20.1 0.2 1.2 8.4 0.1 2.7 1 1 0 2 2 2 2 Coatomer epsilon subunit NRBF2_MIT PF17169.4 gi|15679580|ref|NP_276697.1| - 0.0005 20.2 0.4 3.3 8.0 0.0 4.7 3 2 1 5 5 5 1 MIT domain of nuclear receptor-binding factor 2 TOM20_plant PF06552.12 gi|15679580|ref|NP_276697.1| - 0.0013 18.5 0.3 0.71 9.6 0.0 4.0 2 1 2 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 SRP_TPR_like PF17004.5 gi|15679580|ref|NP_276697.1| - 0.002 18.2 0.1 3.9 7.5 0.0 3.6 2 2 2 4 4 4 1 Putative TPR-like repeat PPR PF01535.20 gi|15679580|ref|NP_276697.1| - 0.0038 17.4 8.1 24 5.5 0.0 6.0 6 0 0 6 6 6 0 PPR repeat HTH_Bact PF18768.1 gi|15679580|ref|NP_276697.1| - 0.034 13.7 2.7 72 3.1 0.0 5.3 7 0 0 7 7 6 0 Helix-turn-helix bacterial domain FAT PF02259.23 gi|15679580|ref|NP_276697.1| - 0.05 12.8 0.0 14 4.8 0.0 2.9 1 1 2 3 3 3 0 FAT domain SNAP PF14938.6 gi|15679580|ref|NP_276697.1| - 0.13 11.6 0.1 0.66 9.3 0.0 2.1 2 1 0 2 2 1 0 Soluble NSF attachment protein, SNAP Radical_SAM PF04055.21 gi|15679581|ref|NP_276698.1| - 2.2e-20 73.7 0.1 3.4e-20 73.1 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679581|ref|NP_276698.1| - 3.6e-13 50.0 0.0 5.5e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679581|ref|NP_276698.1| - 2.4e-08 34.1 0.0 4.6e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain MIT PF04212.18 gi|15679581|ref|NP_276698.1| - 0.022 14.8 0.0 0.057 13.5 0.0 1.7 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain Aminotran_1_2 PF00155.21 gi|15679582|ref|NP_276699.1| - 9.2e-56 189.6 0.0 1e-55 189.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15679582|ref|NP_276699.1| - 2.1e-07 30.2 0.0 8.2e-05 21.7 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|15679582|ref|NP_276699.1| - 9.4e-06 24.4 0.0 1.5e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 gi|15679582|ref|NP_276699.1| - 5.9e-05 22.1 0.0 0.00013 20.9 0.0 1.7 2 0 0 2 2 2 1 Allinase Hexapep PF00132.24 gi|15679583|ref|NP_276700.1| - 2e-15 55.8 20.0 2.8e-09 36.3 5.8 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|15679583|ref|NP_276700.1| - 3.2e-06 26.8 19.6 3.9e-06 26.5 7.4 4.0 2 1 2 4 4 4 3 Hexapeptide repeat of succinyl-transferase NTP_transferase PF00483.23 gi|15679584|ref|NP_276701.1| - 7.1e-46 156.8 0.0 9e-46 156.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|15679584|ref|NP_276701.1| - 1e-19 69.4 29.5 1.2e-08 34.3 0.3 4.8 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|15679584|ref|NP_276701.1| - 5e-14 53.0 0.0 6.8e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|15679584|ref|NP_276701.1| - 9.2e-06 25.3 23.9 0.00077 19.2 2.7 4.8 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|15679584|ref|NP_276701.1| - 5.3e-05 21.6 0.4 8.4e-05 20.9 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) IspD PF01128.19 gi|15679584|ref|NP_276701.1| - 6.8e-05 22.7 0.0 0.0001 22.1 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PGM_PMM_I PF02878.16 gi|15679585|ref|NP_276702.1| - 5.3e-41 139.6 0.0 8.7e-41 138.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|15679585|ref|NP_276702.1| - 9.5e-28 96.8 0.0 2e-27 95.8 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|15679585|ref|NP_276702.1| - 1.3e-20 73.6 0.0 2.4e-20 72.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|15679585|ref|NP_276702.1| - 2e-13 50.3 0.1 7.3e-13 48.5 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PhosphMutase PF10143.9 gi|15679586|ref|NP_276703.1| - 2.6e-58 196.6 0.0 1.2e-56 191.3 0.0 2.1 2 0 0 2 2 2 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|15679586|ref|NP_276703.1| - 4.7e-49 167.0 0.0 5.3e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|15679586|ref|NP_276703.1| - 0.12 11.9 0.2 4.9 6.6 0.1 2.2 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF92 PF01940.16 gi|15679587|ref|NP_276704.1| - 1.3e-51 175.3 12.5 2.8e-51 174.2 12.5 1.5 1 1 0 1 1 1 1 Integral membrane protein DUF92 LMF1 PF06762.14 gi|15679587|ref|NP_276704.1| - 0.076 12.1 0.2 0.064 12.4 0.2 1.1 1 0 0 1 1 1 0 Lipase maturation factor DoxX_3 PF13781.6 gi|15679587|ref|NP_276704.1| - 3.1 8.5 11.4 7 7.3 5.1 2.8 3 0 0 3 3 3 0 DoxX-like family DUF2614 PF11023.8 gi|15679587|ref|NP_276704.1| - 5.8 7.0 6.3 14 5.8 6.3 1.6 1 0 0 1 1 1 0 Zinc-ribbon containing domain Ribosomal_S3Ae PF01015.18 gi|15679588|ref|NP_276705.1| - 1.1e-66 224.3 2.0 1.3e-66 224.1 2.0 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Band_7 PF01145.25 gi|15679588|ref|NP_276705.1| - 0.0011 19.0 0.1 0.0031 17.5 0.1 1.7 1 1 0 2 2 2 1 SPFH domain / Band 7 family PEP_mutase PF13714.6 gi|15679588|ref|NP_276705.1| - 0.024 14.1 0.0 0.031 13.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase DUF1365 PF07103.11 gi|15679588|ref|NP_276705.1| - 0.045 13.4 0.1 1.7 8.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1365) Abhydro_lipase PF04083.16 gi|15679588|ref|NP_276705.1| - 0.091 12.4 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region Nitro_FeMo-Co PF02579.17 gi|15679589|ref|NP_276706.1| - 8.9e-09 35.6 0.0 9.9e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor FeoC PF09012.10 gi|15679589|ref|NP_276706.1| - 0.026 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator FMN_red PF03358.15 gi|15679590|ref|NP_276707.1| - 1.8e-20 73.3 0.0 2.1e-20 73.0 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase PNP_UDP_1 PF01048.20 gi|15679591|ref|NP_276708.1| - 1.3e-46 158.7 0.0 1.6e-46 158.5 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily RtcB PF01139.17 gi|15679592|ref|NP_276709.1| - 2.5e-174 580.3 0.1 3e-174 580.0 0.1 1.1 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB HTH_17 PF12728.7 gi|15679592|ref|NP_276709.1| - 0.16 12.2 0.0 4.5 7.5 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain Archease PF01951.16 gi|15679593|ref|NP_276710.1| - 1.2e-41 142.2 2.2 1.3e-41 142.1 2.2 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) AAA_16 PF13191.6 gi|15679594|ref|NP_276711.1| - 5.2e-08 33.4 0.1 2.6e-06 27.9 0.0 2.8 2 2 1 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 gi|15679594|ref|NP_276711.1| - 7.4e-06 26.3 0.0 2e-05 24.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain TIP49_C PF17856.1 gi|15679594|ref|NP_276711.1| - 0.016 15.4 0.0 0.056 13.6 0.0 1.9 2 0 0 2 2 2 0 TIP49 AAA-lid domain ATPase_2 PF01637.18 gi|15679594|ref|NP_276711.1| - 0.072 13.0 0.1 0.5 10.2 0.1 2.0 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_11 PF13086.6 gi|15679594|ref|NP_276711.1| - 0.08 12.7 0.0 4.2 7.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|15679594|ref|NP_276711.1| - 0.087 12.3 0.0 0.45 10.0 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region TniB PF05621.11 gi|15679594|ref|NP_276711.1| - 0.089 12.2 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein Cdc6_C PF09079.11 gi|15679594|ref|NP_276711.1| - 0.13 12.2 0.1 0.43 10.6 0.1 1.9 1 1 0 1 1 1 0 CDC6, C terminal winged helix domain AAA_14 PF13173.6 gi|15679594|ref|NP_276711.1| - 0.15 12.1 0.0 0.41 10.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain SBDS PF01172.18 gi|15679594|ref|NP_276711.1| - 0.2 11.8 0.0 0.45 10.6 0.0 1.6 1 0 0 1 1 1 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein AAA_35 PF14516.6 gi|15679594|ref|NP_276711.1| - 0.21 10.4 0.0 0.98 8.2 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain MAF_flag10 PF01973.18 gi|15679595|ref|NP_276712.1| - 9.5e-35 119.8 0.0 1.2e-34 119.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.16 gi|15679595|ref|NP_276712.1| - 0.013 15.6 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Aminotran_5 PF00266.19 gi|15679596|ref|NP_276713.1| - 8.2e-44 150.0 0.0 9.6e-44 149.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|15679596|ref|NP_276713.1| - 0.0075 14.8 0.4 0.018 13.6 0.2 1.7 1 1 1 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme TPP_enzyme_N PF02776.18 gi|15679597|ref|NP_276714.1| - 4.9e-47 159.7 0.1 1e-46 158.7 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15679597|ref|NP_276714.1| - 1.2e-42 145.3 0.2 4e-42 143.6 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15679597|ref|NP_276714.1| - 2.1e-34 118.2 0.0 3.5e-34 117.5 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain AMP-binding PF00501.28 gi|15679598|ref|NP_276715.1| - 1.8e-62 211.3 0.0 2.1e-62 211.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|15679598|ref|NP_276715.1| - 1.7e-19 69.4 1.9 1.7e-19 69.4 1.9 2.1 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|15679599|ref|NP_276716.1| - 4.2e-28 98.1 0.5 7.2e-28 97.4 0.5 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15679599|ref|NP_276716.1| - 1.5e-23 83.1 0.1 2e-23 82.7 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme dUTPase PF00692.19 gi|15679600|ref|NP_276717.1| - 3.9e-11 42.7 0.0 5.6e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 dUTPase Tautomerase PF01361.21 gi|15679601|ref|NP_276718.1| - 4.7e-19 68.1 0.0 5.7e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.6 gi|15679601|ref|NP_276718.1| - 4.2e-06 26.8 0.0 4.7e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_3 PF14832.6 gi|15679601|ref|NP_276718.1| - 0.025 14.8 0.0 0.027 14.7 0.0 1.1 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme MIF PF01187.18 gi|15679601|ref|NP_276718.1| - 0.08 13.2 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) RRF PF01765.19 gi|15679601|ref|NP_276718.1| - 0.086 12.8 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 Ribosome recycling factor GAF_2 PF13185.6 gi|15679602|ref|NP_276719.1| - 2.4e-26 92.7 0.0 4.6e-26 91.8 0.0 1.5 1 0 0 1 1 1 1 GAF domain Response_reg PF00072.24 gi|15679602|ref|NP_276719.1| - 7.7e-23 80.8 0.0 1.6e-22 79.8 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain GAF PF01590.26 gi|15679602|ref|NP_276719.1| - 1.9e-14 54.4 0.0 3.8e-14 53.5 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|15679602|ref|NP_276719.1| - 3.1e-05 24.3 0.0 4.9e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 GAF domain Peripla_BP_2 PF01497.18 gi|15679602|ref|NP_276719.1| - 0.05 13.2 0.0 0.093 12.3 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein SRP54 PF00448.22 gi|15679603|ref|NP_276720.1| - 2.5e-77 259.0 1.9 4e-77 258.3 1.9 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|15679603|ref|NP_276720.1| - 3e-15 56.2 2.2 3e-15 56.2 2.2 1.8 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|15679603|ref|NP_276720.1| - 7.8e-08 32.3 2.2 1.3e-07 31.6 2.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15679603|ref|NP_276720.1| - 1.4e-05 25.5 0.2 4e-05 24.0 0.2 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|15679603|ref|NP_276720.1| - 0.0007 18.9 0.2 0.0014 17.9 0.2 1.5 1 0 0 1 1 1 1 Zeta toxin MeaB PF03308.16 gi|15679603|ref|NP_276720.1| - 0.0014 17.6 2.3 0.0068 15.4 1.9 2.1 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|15679603|ref|NP_276720.1| - 0.0029 17.2 1.5 0.0065 16.1 1.5 1.5 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 gi|15679603|ref|NP_276720.1| - 0.0038 17.6 1.1 0.0086 16.4 1.1 1.6 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|15679603|ref|NP_276720.1| - 0.0038 17.3 2.4 0.02 15.0 1.2 2.6 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|15679603|ref|NP_276720.1| - 0.0039 17.5 1.0 0.073 13.3 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|15679603|ref|NP_276720.1| - 0.0045 17.1 0.6 0.0086 16.2 0.1 1.7 2 1 0 2 2 1 1 AAA domain NTPase_1 PF03266.15 gi|15679603|ref|NP_276720.1| - 0.0056 16.6 3.3 1.4 8.8 0.1 3.1 3 0 0 3 3 3 1 NTPase ResIII PF04851.15 gi|15679603|ref|NP_276720.1| - 0.0069 16.4 0.1 0.022 14.8 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit MobB PF03205.14 gi|15679603|ref|NP_276720.1| - 0.0073 16.2 0.7 0.14 12.1 0.1 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|15679603|ref|NP_276720.1| - 0.017 15.5 1.8 0.026 15.0 0.5 2.0 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 gi|15679603|ref|NP_276720.1| - 0.019 14.6 0.2 0.086 12.5 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase APS_kinase PF01583.20 gi|15679603|ref|NP_276720.1| - 0.021 14.7 0.0 0.045 13.7 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_7 PF12775.7 gi|15679603|ref|NP_276720.1| - 0.03 13.9 0.0 0.054 13.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region 6PF2K PF01591.18 gi|15679603|ref|NP_276720.1| - 0.041 13.2 0.0 0.069 12.4 0.0 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase CbiA PF01656.23 gi|15679603|ref|NP_276720.1| - 0.051 13.6 3.1 0.27 11.3 0.1 2.7 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain Torsin PF06309.11 gi|15679603|ref|NP_276720.1| - 0.052 13.7 0.1 0.12 12.5 0.1 1.6 1 1 0 1 1 1 0 Torsin AAA_16 PF13191.6 gi|15679603|ref|NP_276720.1| - 0.062 13.7 0.0 0.14 12.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|15679603|ref|NP_276720.1| - 0.068 12.9 0.1 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain Helicase_RecD PF05127.14 gi|15679603|ref|NP_276720.1| - 0.076 12.9 0.2 0.17 11.7 0.2 1.5 1 0 0 1 1 1 0 Helicase AAA_28 PF13521.6 gi|15679603|ref|NP_276720.1| - 0.095 12.9 0.1 0.19 12.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain B12-binding PF02310.19 gi|15679603|ref|NP_276720.1| - 0.11 12.6 0.7 0.26 11.3 0.6 1.9 1 1 0 1 1 1 0 B12 binding domain Trypan_PARP PF05887.11 gi|15679603|ref|NP_276720.1| - 8.3 6.4 13.1 16 5.5 13.1 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Prefoldin PF02996.17 gi|15679604|ref|NP_276721.1| - 4.2e-29 100.9 5.1 5.6e-29 100.5 5.1 1.2 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|15679604|ref|NP_276721.1| - 0.00011 22.2 9.5 0.0033 17.4 0.8 2.3 2 1 0 2 2 2 2 Prefoldin subunit DUF1664 PF07889.12 gi|15679604|ref|NP_276721.1| - 0.00013 22.0 7.7 0.0037 17.3 0.4 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1664) DUF892 PF05974.12 gi|15679604|ref|NP_276721.1| - 0.00049 20.1 5.1 0.001 19.1 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF892) Gp-FAR-1 PF05823.12 gi|15679604|ref|NP_276721.1| - 0.0013 19.1 2.2 0.0019 18.6 0.2 1.9 2 0 0 2 2 2 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Phasin_2 PF09361.10 gi|15679604|ref|NP_276721.1| - 0.0015 18.8 2.3 0.031 14.5 0.2 2.5 2 1 0 2 2 2 1 Phasin protein NPV_P10 PF05531.12 gi|15679604|ref|NP_276721.1| - 0.0018 18.7 6.1 0.31 11.5 0.2 2.3 2 0 0 2 2 2 2 Nucleopolyhedrovirus P10 protein CdvA PF18822.1 gi|15679604|ref|NP_276721.1| - 0.004 17.0 9.6 0.17 11.7 0.6 2.7 2 1 0 2 2 2 2 CdvA-like coiled-coil domain SesA PF17107.5 gi|15679604|ref|NP_276721.1| - 0.0075 16.5 1.8 2.3 8.4 0.1 2.2 2 0 0 2 2 2 1 N-terminal domain on NACHT_NTPase and P-loop NTPases RPW8 PF05659.11 gi|15679604|ref|NP_276721.1| - 0.013 15.2 4.3 0.21 11.2 0.5 2.2 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 CENP-F_leu_zip PF10473.9 gi|15679604|ref|NP_276721.1| - 0.023 14.7 9.3 0.76 9.8 1.7 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF16 PF01519.16 gi|15679604|ref|NP_276721.1| - 0.027 14.9 10.5 0.52 10.8 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 Sec34 PF04136.15 gi|15679604|ref|NP_276721.1| - 0.028 14.3 5.0 1.5 8.7 0.3 2.1 2 0 0 2 2 2 0 Sec34-like family KELK PF15796.5 gi|15679604|ref|NP_276721.1| - 0.03 14.8 0.9 0.03 14.8 0.9 2.4 3 0 0 3 3 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase FlaC_arch PF05377.11 gi|15679604|ref|NP_276721.1| - 0.031 14.7 10.1 0.59 10.6 1.3 2.6 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) BAR_3 PF16746.5 gi|15679604|ref|NP_276721.1| - 0.033 13.9 0.5 0.033 13.9 0.5 2.0 2 0 0 2 2 2 0 BAR domain of APPL family Lipoprotein_20 PF13942.6 gi|15679604|ref|NP_276721.1| - 0.035 14.0 0.7 0.035 14.0 0.7 2.0 2 0 0 2 2 2 0 YfhG lipoprotein WXG100 PF06013.12 gi|15679604|ref|NP_276721.1| - 0.043 14.1 4.7 0.13 12.5 0.2 2.6 2 1 0 2 2 2 0 Proteins of 100 residues with WXG MscS_porin PF12795.7 gi|15679604|ref|NP_276721.1| - 0.063 12.8 8.3 0.088 12.3 3.2 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain DUF948 PF06103.11 gi|15679604|ref|NP_276721.1| - 0.071 13.4 3.3 1.4 9.2 0.2 2.4 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Nsp1_C PF05064.13 gi|15679604|ref|NP_276721.1| - 0.083 12.7 0.2 0.083 12.7 0.2 2.3 2 0 0 2 2 2 0 Nsp1-like C-terminal region FliD_N PF02465.18 gi|15679604|ref|NP_276721.1| - 0.092 13.5 4.7 0.15 12.8 0.4 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Baculo_PEP_C PF04513.12 gi|15679604|ref|NP_276721.1| - 0.1 12.6 3.2 3.9 7.5 0.1 2.2 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus USP8_interact PF08941.10 gi|15679604|ref|NP_276721.1| - 0.11 12.3 3.9 3.1 7.6 0.4 2.1 2 0 0 2 2 2 0 USP8 interacting COG2 PF06148.11 gi|15679604|ref|NP_276721.1| - 0.11 12.6 5.3 0.94 9.6 0.4 2.2 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 YtxH PF12732.7 gi|15679604|ref|NP_276721.1| - 0.12 12.9 3.9 1.1 9.8 3.9 2.5 1 1 0 1 1 1 0 YtxH-like protein Apolipoprotein PF01442.18 gi|15679604|ref|NP_276721.1| - 0.12 12.3 6.4 1 9.2 6.4 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Laminin_II PF06009.12 gi|15679604|ref|NP_276721.1| - 0.12 12.4 4.8 1.3 9.0 0.4 2.2 2 0 0 2 2 2 0 Laminin Domain II TPR_MLP1_2 PF07926.12 gi|15679604|ref|NP_276721.1| - 0.17 11.9 7.7 0.7 10.0 0.4 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein THOC7 PF05615.13 gi|15679604|ref|NP_276721.1| - 0.18 12.1 3.6 5.6 7.3 1.1 2.2 2 0 0 2 2 2 0 Tho complex subunit 7 APG17 PF04108.12 gi|15679604|ref|NP_276721.1| - 0.2 10.7 7.7 2.2 7.3 0.5 2.0 1 1 1 2 2 2 0 Autophagy protein Apg17 DUF4200 PF13863.6 gi|15679604|ref|NP_276721.1| - 0.21 12.0 9.1 0.19 12.1 0.7 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Latarcin PF10279.9 gi|15679604|ref|NP_276721.1| - 0.21 12.0 3.2 19 5.8 3.2 2.5 1 1 0 1 1 1 0 Latarcin precursor T3SS_basalb_I PF17001.5 gi|15679604|ref|NP_276721.1| - 0.21 12.2 4.4 0.35 11.5 0.4 2.1 2 0 0 2 2 2 0 Type III secretion basal body protein I, YscI, HrpB, PscI ApoLp-III PF07464.11 gi|15679604|ref|NP_276721.1| - 0.23 11.6 6.6 0.16 12.1 0.6 2.2 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Nup54 PF13874.6 gi|15679604|ref|NP_276721.1| - 0.28 11.3 6.1 0.52 10.4 2.5 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Borrelia_lipo_1 PF05714.11 gi|15679604|ref|NP_276721.1| - 0.28 10.9 8.3 2.6 7.8 8.3 2.1 1 1 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein Snapin_Pallidin PF14712.6 gi|15679604|ref|NP_276721.1| - 0.31 11.5 6.9 5.6 7.5 0.7 2.3 2 0 0 2 2 2 0 Snapin/Pallidin Cob_adeno_trans PF01923.18 gi|15679604|ref|NP_276721.1| - 0.31 11.2 3.7 2.8 8.1 3.7 2.0 1 1 0 1 1 1 0 Cobalamin adenosyltransferase KxDL PF10241.9 gi|15679604|ref|NP_276721.1| - 0.31 11.3 5.5 2.8 8.3 0.6 2.6 2 1 0 2 2 2 0 Uncharacterized conserved protein RasGAP_C PF03836.15 gi|15679604|ref|NP_276721.1| - 0.36 11.0 6.2 8 6.6 0.1 2.4 2 1 0 2 2 2 0 RasGAP C-terminus PilO PF04350.13 gi|15679604|ref|NP_276721.1| - 0.36 11.0 4.2 6.6 6.9 0.8 2.2 2 0 0 2 2 2 0 Pilus assembly protein, PilO Tweety PF04906.13 gi|15679604|ref|NP_276721.1| - 0.39 9.3 3.8 1.4 7.5 0.7 2.0 2 0 0 2 2 2 0 Tweety Tup_N PF08581.10 gi|15679604|ref|NP_276721.1| - 0.4 11.0 9.3 0.78 10.1 1.1 2.4 2 0 0 2 2 2 0 Tup N-terminal EMP24_GP25L PF01105.24 gi|15679604|ref|NP_276721.1| - 0.43 10.5 8.7 0.21 11.5 0.4 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Spc7 PF08317.11 gi|15679604|ref|NP_276721.1| - 0.44 9.4 7.4 1.8 7.3 0.3 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein YabA PF06156.13 gi|15679604|ref|NP_276721.1| - 0.46 11.1 5.5 6.8 7.4 0.3 2.2 2 0 0 2 2 2 0 Initiation control protein YabA DASH_Hsk3 PF08227.11 gi|15679604|ref|NP_276721.1| - 0.48 10.8 0.1 0.48 10.8 0.1 2.7 2 1 1 3 3 3 0 DASH complex subunit Hsk3 like DUF812 PF05667.11 gi|15679604|ref|NP_276721.1| - 0.53 9.1 10.2 0.38 9.6 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF812) OmpH PF03938.14 gi|15679604|ref|NP_276721.1| - 0.56 10.5 9.8 0.16 12.3 0.6 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Uso1_p115_C PF04871.13 gi|15679604|ref|NP_276721.1| - 0.64 10.4 6.0 1.4 9.3 1.0 2.2 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region dCache_2 PF08269.11 gi|15679604|ref|NP_276721.1| - 0.66 9.1 3.9 0.79 8.8 0.1 2.0 2 0 0 2 2 2 0 Cache domain Exonuc_VII_S PF02609.16 gi|15679604|ref|NP_276721.1| - 0.77 9.9 8.5 13 6.0 2.1 3.6 3 1 0 3 3 3 0 Exonuclease VII small subunit BORCS7 PF16088.5 gi|15679604|ref|NP_276721.1| - 1.1 9.6 8.8 1.1 9.5 0.5 2.6 2 1 0 2 2 2 0 BLOC-1-related complex sub-unit 7 Prominin PF05478.11 gi|15679604|ref|NP_276721.1| - 1.5 6.7 6.7 9.4 4.0 6.7 1.8 1 1 0 1 1 1 0 Prominin BLOC1_2 PF10046.9 gi|15679604|ref|NP_276721.1| - 1.7 9.0 12.3 3.1 8.2 0.9 2.4 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tektin PF03148.14 gi|15679604|ref|NP_276721.1| - 1.9 7.1 8.4 0.82 8.4 0.5 2.1 2 0 0 2 2 2 0 Tektin family DUF5320 PF17253.2 gi|15679604|ref|NP_276721.1| - 2.1 9.5 4.8 33 5.6 0.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5320) H-kinase_dim PF02895.14 gi|15679604|ref|NP_276721.1| - 2.6 8.5 6.3 0.96 9.9 0.4 2.3 2 1 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain XhlA PF10779.9 gi|15679604|ref|NP_276721.1| - 3.1 8.1 10.3 9.4 6.5 1.7 2.4 2 0 0 2 2 2 0 Haemolysin XhlA HAUS6_N PF14661.6 gi|15679604|ref|NP_276721.1| - 6 6.4 7.1 96 2.4 7.1 2.0 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus AAA_23 PF13476.6 gi|15679604|ref|NP_276721.1| - 6.3 7.2 10.2 83 3.6 10.2 2.0 1 1 0 1 1 1 0 AAA domain Ribosomal_L18A PF01775.17 gi|15679605|ref|NP_276722.1| - 5.1e-11 42.7 0.1 1.1e-10 41.7 0.1 1.4 1 1 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A eIF-6 PF01912.18 gi|15679606|ref|NP_276723.1| - 1.1e-64 217.5 7.9 1.5e-64 217.1 7.7 1.3 1 1 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.19 gi|15679607|ref|NP_276724.1| - 1e-14 54.5 1.1 1.1e-14 54.3 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e CsrA PF02599.16 gi|15679607|ref|NP_276724.1| - 0.082 12.9 1.9 0.11 12.5 0.2 2.1 2 1 0 2 2 2 0 Global regulator protein family Peptidase_C26 PF07722.13 gi|15679607|ref|NP_276724.1| - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase C26 Ribosomal_L39 PF00832.20 gi|15679608|ref|NP_276725.1| - 2.3e-21 75.1 14.9 2.8e-21 74.8 14.9 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Asn_synthase PF00733.21 gi|15679609|ref|NP_276726.1| - 0.013 15.2 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Lipase_GDSL_2 PF13472.6 gi|15679609|ref|NP_276726.1| - 0.014 15.8 0.0 0.022 15.1 0.0 1.3 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family QueC PF06508.13 gi|15679609|ref|NP_276726.1| - 0.033 13.7 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|15679609|ref|NP_276726.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.6 1 0 0 1 1 1 0 Diphthamide synthase tRNA_Me_trans PF03054.16 gi|15679609|ref|NP_276726.1| - 0.15 10.8 0.0 0.22 10.3 0.0 1.4 1 1 0 1 1 1 0 tRNA methyl transferase dsDNA_bind PF01984.20 gi|15679610|ref|NP_276727.1| - 9.2e-29 100.0 22.4 1e-28 99.8 22.4 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DNA_ligase_A_C PF04679.15 gi|15679610|ref|NP_276727.1| - 0.047 14.3 0.5 1.5 9.5 0.0 2.2 1 1 1 2 2 2 0 ATP dependent DNA ligase C terminal region DUF4199 PF13858.6 gi|15679610|ref|NP_276727.1| - 2.2 8.7 8.7 20 5.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) DUF945 PF06097.11 gi|15679610|ref|NP_276727.1| - 2.8 7.0 11.2 3.3 6.7 11.2 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF945) Ribosomal_S19e PF01090.19 gi|15679611|ref|NP_276728.1| - 4e-60 201.5 0.0 4.5e-60 201.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 gi|15679611|ref|NP_276728.1| - 0.00061 19.7 0.1 0.0014 18.6 0.1 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain RuvB_C PF05491.13 gi|15679611|ref|NP_276728.1| - 0.00092 19.0 0.0 0.043 13.7 0.0 2.2 2 0 0 2 2 2 1 RuvB C-terminal winged helix domain HTH_45 PF14947.6 gi|15679611|ref|NP_276728.1| - 0.0028 17.6 0.0 0.0042 17.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_DeoR PF08220.12 gi|15679611|ref|NP_276728.1| - 0.022 14.5 0.0 0.079 12.7 0.0 1.9 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain GntR PF00392.21 gi|15679611|ref|NP_276728.1| - 0.061 13.0 0.7 0.13 11.9 0.2 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family CRS1_YhbY PF01985.21 gi|15679612|ref|NP_276729.1| - 4.7e-09 36.3 0.6 5.1e-09 36.2 0.6 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain LAMTOR PF15454.6 gi|15679612|ref|NP_276729.1| - 0.045 14.4 0.0 0.071 13.7 0.0 1.3 1 0 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator CUT PF02376.15 gi|15679612|ref|NP_276729.1| - 0.086 13.0 0.1 0.092 12.9 0.1 1.1 1 0 0 1 1 1 0 CUT domain Rpr2 PF04032.16 gi|15679613|ref|NP_276730.1| - 7.5e-16 58.2 0.9 1.1e-15 57.7 0.9 1.4 1 1 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain MazE_antitoxin PF04014.18 gi|15679613|ref|NP_276730.1| - 0.013 15.4 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin zinc_ribbon_12 PF11331.8 gi|15679613|ref|NP_276730.1| - 0.049 13.4 0.7 0.087 12.7 0.7 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain DZR PF12773.7 gi|15679613|ref|NP_276730.1| - 0.064 13.3 0.8 0.064 13.3 0.8 1.7 2 0 0 2 2 2 0 Double zinc ribbon Ribosomal_L40e PF01020.17 gi|15679613|ref|NP_276730.1| - 0.18 11.7 10.8 0.9 9.5 6.9 3.0 2 1 0 2 2 2 0 Ribosomal L40e family AAA_18 PF13238.6 gi|15679614|ref|NP_276731.1| - 5e-22 78.8 0.0 6.3e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15679614|ref|NP_276731.1| - 6.4e-06 26.6 0.2 2.5e-05 24.7 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|15679614|ref|NP_276731.1| - 6.5e-06 26.5 0.1 2.1e-05 24.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|15679614|ref|NP_276731.1| - 0.0023 18.1 0.0 0.027 14.6 0.0 2.1 1 1 1 2 2 2 1 AAA domain dNK PF01712.19 gi|15679614|ref|NP_276731.1| - 0.0041 17.0 0.1 0.094 12.6 0.1 2.3 2 1 1 3 3 3 1 Deoxynucleoside kinase AAA PF00004.29 gi|15679614|ref|NP_276731.1| - 0.0047 17.3 0.0 0.023 15.1 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15679614|ref|NP_276731.1| - 0.005 17.1 0.4 0.015 15.5 0.3 1.9 1 1 1 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|15679614|ref|NP_276731.1| - 0.013 15.5 0.4 0.025 14.5 0.3 1.6 2 0 0 2 2 2 0 NTPase ADK PF00406.22 gi|15679614|ref|NP_276731.1| - 0.026 14.6 0.2 0.38 10.9 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase AAA_24 PF13479.6 gi|15679614|ref|NP_276731.1| - 0.055 13.2 0.0 0.065 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|15679614|ref|NP_276731.1| - 0.099 12.4 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 gi|15679614|ref|NP_276731.1| - 0.11 12.8 0.0 0.35 11.3 0.0 1.8 2 0 0 2 2 2 0 RNA helicase AAA_16 PF13191.6 gi|15679614|ref|NP_276731.1| - 0.12 12.8 0.2 0.14 12.6 0.2 1.4 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|15679614|ref|NP_276731.1| - 0.14 12.0 0.2 0.28 11.1 0.2 1.4 1 0 0 1 1 1 0 NACHT domain MeaB PF03308.16 gi|15679614|ref|NP_276731.1| - 0.24 10.3 0.6 0.48 9.4 0.2 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Thi4 PF01946.17 gi|15679615|ref|NP_276732.1| - 1.4e-101 338.7 0.2 1.7e-101 338.4 0.2 1.1 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|15679615|ref|NP_276732.1| - 2.3e-10 40.4 0.3 4.1e-10 39.6 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|15679615|ref|NP_276732.1| - 1.6e-07 31.2 4.0 0.00059 19.5 2.6 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15679615|ref|NP_276732.1| - 4.9e-07 29.9 2.2 1.7e-06 28.2 1.9 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|15679615|ref|NP_276732.1| - 6.7e-06 25.4 5.6 0.0032 16.6 2.0 2.6 2 1 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.14 gi|15679615|ref|NP_276732.1| - 6.6e-05 22.3 0.1 9.2e-05 21.8 0.0 1.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15679615|ref|NP_276732.1| - 0.0004 19.8 0.3 0.00064 19.1 0.3 1.3 1 1 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 gi|15679615|ref|NP_276732.1| - 0.0042 16.4 1.2 0.012 15.0 0.4 1.9 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|15679615|ref|NP_276732.1| - 0.005 15.6 1.5 0.0081 14.9 1.5 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|15679615|ref|NP_276732.1| - 0.013 14.6 1.7 0.016 14.3 0.9 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|15679615|ref|NP_276732.1| - 0.046 14.3 0.5 0.11 13.0 0.5 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15679615|ref|NP_276732.1| - 0.064 12.5 0.0 0.17 11.1 0.0 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase MMR_HSR1_Xtn PF16897.5 gi|15679616|ref|NP_276733.1| - 1.2e-37 128.1 0.3 2.9e-37 126.9 0.3 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|15679616|ref|NP_276733.1| - 6.2e-23 81.1 0.0 1.7e-22 79.7 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|15679616|ref|NP_276733.1| - 1.3e-22 79.6 0.1 2.3e-22 78.8 0.1 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|15679616|ref|NP_276733.1| - 3.4e-15 55.9 0.3 2e-14 53.4 0.0 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|15679616|ref|NP_276733.1| - 6.5e-07 29.4 0.2 0.004 17.1 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|15679616|ref|NP_276733.1| - 0.00033 20.8 0.1 0.58 10.2 0.1 2.8 2 1 1 3 3 3 2 Dynamin family Arf PF00025.21 gi|15679616|ref|NP_276733.1| - 0.00088 18.8 0.2 0.012 15.1 0.0 2.3 2 1 0 2 2 2 1 ADP-ribosylation factor family AAA_16 PF13191.6 gi|15679616|ref|NP_276733.1| - 0.0054 17.1 0.1 0.017 15.5 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain Roc PF08477.13 gi|15679616|ref|NP_276733.1| - 0.0064 16.7 0.1 0.23 11.7 0.0 2.5 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 gi|15679616|ref|NP_276733.1| - 0.01 15.4 0.1 1 8.9 0.0 2.9 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 gi|15679616|ref|NP_276733.1| - 0.013 15.8 0.0 0.028 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|15679616|ref|NP_276733.1| - 0.038 13.4 0.0 0.069 12.6 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit ATP_bind_1 PF03029.17 gi|15679616|ref|NP_276733.1| - 0.039 13.7 0.1 4.1 7.1 0.0 2.7 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AIG1 PF04548.16 gi|15679616|ref|NP_276733.1| - 0.065 12.5 0.5 0.13 11.6 0.0 1.7 2 0 0 2 2 2 0 AIG1 family cobW PF02492.19 gi|15679616|ref|NP_276733.1| - 0.084 12.5 2.1 1.8 8.1 0.0 2.9 3 1 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|15679616|ref|NP_276733.1| - 0.091 11.7 0.0 0.26 10.2 0.0 1.8 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|15679616|ref|NP_276733.1| - 0.093 13.3 0.1 0.47 11.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain YchF-GTPase_C PF06071.13 gi|15679616|ref|NP_276733.1| - 0.11 12.7 0.0 0.39 11.0 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF933) AAA_22 PF13401.6 gi|15679616|ref|NP_276733.1| - 0.13 12.5 0.0 0.42 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.10 gi|15679616|ref|NP_276733.1| - 0.14 11.6 0.0 0.34 10.3 0.0 1.7 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Ras PF00071.22 gi|15679616|ref|NP_276733.1| - 0.15 11.6 0.1 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 Ras family CBS PF00571.28 gi|15679617|ref|NP_276734.1| - 5.1e-20 71.7 7.0 5.9e-12 45.8 0.3 2.1 2 0 0 2 2 2 2 CBS domain IF3_N PF05198.16 gi|15679617|ref|NP_276734.1| - 0.0036 17.5 2.3 1.7 9.0 0.4 3.3 1 1 1 2 2 2 2 Translation initiation factor IF-3, N-terminal domain STT3 PF02516.14 gi|15679618|ref|NP_276735.1| - 5.1e-173 576.5 23.6 6.2e-173 576.2 23.6 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Chs7 PF12271.8 gi|15679618|ref|NP_276735.1| - 4.1 6.7 13.9 0.078 12.3 5.1 2.5 3 0 0 3 3 3 0 Chitin synthase export chaperone Topoisom_bac PF01131.20 gi|15679619|ref|NP_276736.1| - 7.7e-123 410.5 0.0 9.4e-123 410.3 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|15679619|ref|NP_276736.1| - 3e-29 100.5 25.1 1.4e-15 56.8 5.5 3.8 3 1 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|15679619|ref|NP_276736.1| - 6.8e-13 48.7 0.1 2.3e-12 47.0 0.0 1.9 2 0 0 2 2 2 1 Toprim domain DNA_ligase_ZBD PF03119.16 gi|15679619|ref|NP_276736.1| - 0.0042 17.1 4.3 0.78 9.8 0.9 3.0 2 0 0 2 2 2 2 NAD-dependent DNA ligase C4 zinc finger domain SAP PF02037.27 gi|15679619|ref|NP_276736.1| - 0.04 13.7 1.0 8.9 6.2 0.1 2.8 2 0 0 2 2 2 0 SAP domain DUF1272 PF06906.11 gi|15679619|ref|NP_276736.1| - 0.076 13.1 5.3 7.4 6.8 0.0 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1272) Asp_Glu_race PF01177.22 gi|15679619|ref|NP_276736.1| - 0.21 11.4 0.1 0.41 10.4 0.1 1.4 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase Rubredoxin_2 PF18073.1 gi|15679619|ref|NP_276736.1| - 0.25 11.1 8.4 2.4 8.0 0.5 3.0 3 0 0 3 3 3 0 Rubredoxin metal binding domain DZR PF12773.7 gi|15679619|ref|NP_276736.1| - 0.38 10.8 7.2 11 6.1 7.0 2.7 1 1 0 1 1 1 0 Double zinc ribbon ADK_lid PF05191.14 gi|15679619|ref|NP_276736.1| - 0.41 10.7 10.1 26 4.9 7.5 3.6 2 1 0 2 2 2 0 Adenylate kinase, active site lid TF_Zn_Ribbon PF08271.12 gi|15679619|ref|NP_276736.1| - 0.83 9.2 6.4 2.8 7.5 0.1 3.6 3 0 0 3 3 3 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|15679619|ref|NP_276736.1| - 1.7 8.5 10.3 1.2 8.9 1.4 3.7 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15679619|ref|NP_276736.1| - 2.2 8.5 9.2 45 4.3 0.0 3.6 2 1 1 3 3 3 0 Zinc ribbon domain FYVE PF01363.21 gi|15679620|ref|NP_276737.1| - 0.042 14.0 2.1 0.07 13.3 2.1 1.4 1 1 0 1 1 1 0 FYVE zinc finger HAD PF12710.7 gi|15679621|ref|NP_276738.1| - 4.4e-20 72.9 1.1 2e-19 70.7 0.0 2.5 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15679621|ref|NP_276738.1| - 1.2e-19 71.5 0.4 1.2e-19 71.5 0.4 2.2 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15679621|ref|NP_276738.1| - 2.2e-09 37.4 0.0 2.2e-09 37.4 0.0 4.3 2 1 2 4 4 4 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|15679621|ref|NP_276738.1| - 2.3e-09 37.6 0.4 2.3e-09 37.6 0.4 4.3 3 2 0 3 3 3 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|15679621|ref|NP_276738.1| - 7.7e-08 32.0 0.2 6.4e-06 25.7 0.0 2.8 2 0 0 2 2 2 1 Putative Phosphatase GHMP_kinases_C PF08544.13 gi|15679621|ref|NP_276738.1| - 2.5 8.5 4.9 8.3 6.9 0.0 3.6 3 1 0 3 3 3 0 GHMP kinases C terminal Sec34 PF04136.15 gi|15679621|ref|NP_276738.1| - 5.1 7.0 20.9 3.8 7.4 5.3 3.4 2 2 2 4 4 4 0 Sec34-like family TBP PF00352.21 gi|15679622|ref|NP_276739.1| - 5.5e-60 199.3 0.0 1.2e-29 102.0 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|15679622|ref|NP_276739.1| - 2.1e-06 27.8 0.0 0.029 14.5 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Trans_coact PF16805.5 gi|15679622|ref|NP_276739.1| - 0.035 14.2 0.0 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Phage late-transcription coactivator T4bSS_IcmS PF12608.8 gi|15679622|ref|NP_276739.1| - 0.042 14.2 0.0 13 6.2 0.0 2.1 2 0 0 2 2 2 0 Type IVb secretion, IcmS, effector-recruitment CYTH PF01928.21 gi|15679624|ref|NP_276741.1| - 3.4e-41 141.1 0.9 3.8e-41 141.0 0.9 1.0 1 0 0 1 1 1 1 CYTH domain HMGL-like PF00682.19 gi|15679625|ref|NP_276742.1| - 2.4e-83 279.7 0.2 3.1e-83 279.4 0.2 1.1 1 0 0 1 1 1 1 HMGL-like HTH_22 PF13309.6 gi|15679625|ref|NP_276742.1| - 0.0098 16.0 0.0 0.03 14.4 0.0 1.9 1 0 0 1 1 1 1 HTH domain AP_endonuc_2 PF01261.24 gi|15679625|ref|NP_276742.1| - 0.09 12.2 0.4 8.5 5.7 0.1 3.2 2 1 1 3 3 3 0 Xylose isomerase-like TIM barrel Aconitase PF00330.20 gi|15679626|ref|NP_276743.1| - 1.4e-98 330.9 1.9 1.5e-96 324.2 1.9 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF98 PF01947.16 gi|15679627|ref|NP_276744.1| - 1.9e-41 141.5 0.0 2.5e-41 141.1 0.0 1.1 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase UTRA PF07702.13 gi|15679627|ref|NP_276744.1| - 5.4e-08 32.8 0.0 7.4e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.13 gi|15679627|ref|NP_276744.1| - 8.2e-05 22.3 0.0 0.0001 22.0 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase GerE PF00196.19 gi|15679627|ref|NP_276744.1| - 0.16 11.6 0.1 2.5 7.7 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family XPG_I PF00867.18 gi|15679628|ref|NP_276745.1| - 2.5e-28 98.3 0.0 4.6e-28 97.4 0.0 1.5 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|15679628|ref|NP_276745.1| - 1.5e-16 60.7 0.0 2.3e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|15679628|ref|NP_276745.1| - 0.003 18.1 0.0 0.0065 17.0 0.0 1.6 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold AAA_12 PF13087.6 gi|15679629|ref|NP_276746.1| - 1.1e-57 194.9 0.0 1.8e-57 194.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|15679629|ref|NP_276746.1| - 8.1e-56 189.7 0.0 2.5e-55 188.1 0.1 1.7 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|15679629|ref|NP_276746.1| - 3e-14 53.2 0.0 3.5e-09 36.7 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_19 PF13245.6 gi|15679629|ref|NP_276746.1| - 9.7e-07 29.2 0.0 3e-05 24.4 0.0 2.7 2 1 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|15679629|ref|NP_276746.1| - 1.1e-06 28.5 0.0 0.35 10.6 0.0 3.2 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 gi|15679629|ref|NP_276746.1| - 8.4e-05 23.0 0.2 0.00029 21.3 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15679629|ref|NP_276746.1| - 0.00011 22.4 0.1 0.00077 19.8 0.0 2.4 2 1 0 3 3 3 1 AAA domain Helicase_RecD PF05127.14 gi|15679629|ref|NP_276746.1| - 0.00038 20.4 0.3 0.03 14.2 0.0 2.3 1 1 1 2 2 2 1 Helicase PIF1 PF05970.14 gi|15679629|ref|NP_276746.1| - 0.00067 18.9 0.0 0.0068 15.6 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase T2SSE PF00437.20 gi|15679629|ref|NP_276746.1| - 0.004 16.3 0.0 0.0082 15.2 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 gi|15679629|ref|NP_276746.1| - 0.0041 16.1 0.0 0.007 15.3 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 gi|15679629|ref|NP_276746.1| - 0.0051 16.8 0.0 0.02 14.9 0.0 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit UvrD-helicase PF00580.21 gi|15679629|ref|NP_276746.1| - 0.015 14.8 0.1 0.066 12.7 0.0 1.9 1 1 1 2 2 2 0 UvrD/REP helicase N-terminal domain UvrD_C_2 PF13538.6 gi|15679629|ref|NP_276746.1| - 0.065 13.1 0.0 0.19 11.6 0.0 1.9 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Sigma54_activat PF00158.26 gi|15679629|ref|NP_276746.1| - 0.13 11.9 0.0 0.45 10.2 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF2119 PF09892.9 gi|15679630|ref|NP_276747.1| - 2.2e-74 248.9 0.0 2.5e-74 248.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) AdoHcyase PF05221.17 gi|15679631|ref|NP_276748.1| - 4.7e-58 196.7 0.0 1.6e-31 109.6 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|15679631|ref|NP_276748.1| - 7.3e-54 182.2 1.6 1e-53 181.7 1.0 1.6 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|15679631|ref|NP_276748.1| - 3.1e-10 39.7 0.1 5.3e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|15679631|ref|NP_276748.1| - 6.3e-09 35.6 0.0 1.2e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|15679631|ref|NP_276748.1| - 0.0077 15.6 1.9 0.015 14.6 1.9 1.4 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|15679631|ref|NP_276748.1| - 0.01 16.1 0.7 0.03 14.6 0.1 2.2 3 1 0 3 3 3 0 TrkA-N domain THF_DHG_CYH_C PF02882.19 gi|15679631|ref|NP_276748.1| - 0.015 14.6 0.7 0.061 12.6 0.7 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 gi|15679631|ref|NP_276748.1| - 0.046 14.3 0.1 0.12 13.0 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|15679631|ref|NP_276748.1| - 0.13 12.3 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase zf-RNPHF PF08080.12 gi|15679631|ref|NP_276748.1| - 0.14 12.2 1.3 0.25 11.3 1.3 1.4 1 0 0 1 1 1 0 RNPHF zinc finger AAA PF00004.29 gi|15679634|ref|NP_276751.1| - 2.6e-100 332.1 0.1 8.7e-50 168.6 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15679634|ref|NP_276751.1| - 3.9e-36 122.6 2.9 1.1e-18 66.7 0.7 2.6 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|15679634|ref|NP_276751.1| - 7.8e-33 112.5 0.5 1e-29 102.5 0.4 3.2 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|15679634|ref|NP_276751.1| - 1.3e-17 64.4 0.0 7.5e-09 35.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) CDC48_2 PF02933.17 gi|15679634|ref|NP_276751.1| - 1.4e-17 63.2 1.3 5.2e-17 61.4 0.4 2.4 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 gi|15679634|ref|NP_276751.1| - 1.1e-13 51.9 0.1 5.7e-06 26.8 0.0 3.5 2 1 0 3 3 3 2 AAA ATPase domain RuvB_N PF05496.12 gi|15679634|ref|NP_276751.1| - 2.5e-13 50.1 0.1 3.3e-06 27.0 0.0 2.9 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|15679634|ref|NP_276751.1| - 2.5e-11 43.9 0.0 3e-05 24.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|15679634|ref|NP_276751.1| - 3.7e-11 43.5 0.4 0.011 16.0 0.0 4.1 2 2 2 4 4 4 2 AAA domain TIP49 PF06068.13 gi|15679634|ref|NP_276751.1| - 1.2e-10 41.2 0.0 0.0002 20.7 0.0 2.6 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_14 PF13173.6 gi|15679634|ref|NP_276751.1| - 3.3e-10 40.1 0.0 0.00016 21.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|15679634|ref|NP_276751.1| - 3e-09 37.0 1.7 0.0054 16.7 0.2 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|15679634|ref|NP_276751.1| - 2e-07 30.9 0.7 0.016 14.9 0.0 3.5 3 2 0 3 3 3 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|15679634|ref|NP_276751.1| - 5.2e-07 29.1 0.1 0.0084 15.4 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin Mg_chelatase PF01078.21 gi|15679634|ref|NP_276751.1| - 1.8e-06 27.5 0.3 0.034 13.5 0.1 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|15679634|ref|NP_276751.1| - 2.1e-06 27.6 0.0 0.056 13.3 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 gi|15679634|ref|NP_276751.1| - 2.7e-06 26.9 0.4 0.16 11.3 0.0 3.9 2 1 0 3 3 3 2 KaiC Bac_DnaA PF00308.18 gi|15679634|ref|NP_276751.1| - 2.8e-06 27.4 0.0 0.049 13.5 0.0 3.5 2 2 1 3 3 3 2 Bacterial dnaA protein IstB_IS21 PF01695.17 gi|15679634|ref|NP_276751.1| - 3.1e-06 27.0 0.0 0.086 12.6 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|15679634|ref|NP_276751.1| - 7.8e-06 26.2 0.0 0.15 12.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|15679634|ref|NP_276751.1| - 9e-06 26.0 0.0 0.18 12.2 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_18 PF13238.6 gi|15679634|ref|NP_276751.1| - 2.1e-05 25.1 0.1 0.41 11.2 0.0 3.1 3 0 0 3 3 2 2 AAA domain Viral_helicase1 PF01443.18 gi|15679634|ref|NP_276751.1| - 2.5e-05 24.2 0.0 0.04 13.7 0.0 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase TsaE PF02367.17 gi|15679634|ref|NP_276751.1| - 2.7e-05 24.2 0.0 0.24 11.4 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|15679634|ref|NP_276751.1| - 3.3e-05 23.5 0.0 0.19 11.2 0.0 3.0 3 0 0 3 3 2 2 P-loop containing dynein motor region DUF2075 PF09848.9 gi|15679634|ref|NP_276751.1| - 4.1e-05 23.0 0.0 0.23 10.6 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.22 gi|15679634|ref|NP_276751.1| - 5.3e-05 22.5 0.0 0.34 10.1 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain DUF815 PF05673.13 gi|15679634|ref|NP_276751.1| - 6.8e-05 22.1 0.0 0.19 10.9 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ABC_tran PF00005.27 gi|15679634|ref|NP_276751.1| - 8.7e-05 23.1 0.0 0.31 11.6 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_24 PF13479.6 gi|15679634|ref|NP_276751.1| - 8.8e-05 22.3 0.0 0.16 11.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|15679634|ref|NP_276751.1| - 0.0001 21.9 1.9 11 5.6 0.1 4.4 4 0 0 4 4 4 0 AAA domain PhoH PF02562.16 gi|15679634|ref|NP_276751.1| - 0.00013 21.5 0.3 0.44 10.0 0.0 3.1 3 0 0 3 3 3 2 PhoH-like protein NACHT PF05729.12 gi|15679634|ref|NP_276751.1| - 0.00018 21.5 1.2 0.89 9.4 0.1 3.4 4 0 0 4 4 3 2 NACHT domain AAA_11 PF13086.6 gi|15679634|ref|NP_276751.1| - 0.00053 19.9 0.0 0.24 11.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|15679634|ref|NP_276751.1| - 0.0016 18.2 1.4 1.2 8.8 0.0 2.9 3 0 0 3 3 3 1 AAA domain Parvo_NS1 PF01057.17 gi|15679634|ref|NP_276751.1| - 0.0032 16.6 0.1 1.4 8.0 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 CPT PF07931.12 gi|15679634|ref|NP_276751.1| - 0.0048 16.7 0.1 2.3 8.0 0.0 2.9 2 1 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein NTPase_1 PF03266.15 gi|15679634|ref|NP_276751.1| - 0.0049 16.8 2.9 8.2 6.3 0.0 4.4 3 2 1 4 4 4 0 NTPase Torsin PF06309.11 gi|15679634|ref|NP_276751.1| - 0.0058 16.7 0.0 2.8 8.0 0.0 2.5 2 0 0 2 2 2 1 Torsin AAA_19 PF13245.6 gi|15679634|ref|NP_276751.1| - 0.0066 16.8 1.2 2.8 8.3 0.0 2.8 2 1 1 3 3 2 1 AAA domain Vps4_C PF09336.10 gi|15679634|ref|NP_276751.1| - 0.0078 16.2 0.4 0.55 10.3 0.2 3.0 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AFG1_ATPase PF03969.16 gi|15679634|ref|NP_276751.1| - 0.016 14.1 0.0 1.6 7.5 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase Hydin_ADK PF17213.3 gi|15679634|ref|NP_276751.1| - 0.017 15.4 0.5 7 6.9 0.0 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_17 PF13207.6 gi|15679634|ref|NP_276751.1| - 0.021 15.2 0.0 11 6.4 0.0 3.5 3 0 0 3 3 3 0 AAA domain ResIII PF04851.15 gi|15679634|ref|NP_276751.1| - 0.028 14.4 0.0 5.4 7.0 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Sigma54_activ_2 PF14532.6 gi|15679634|ref|NP_276751.1| - 0.035 14.2 0.0 8 6.6 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain cobW PF02492.19 gi|15679634|ref|NP_276751.1| - 0.048 13.2 0.5 9 5.9 0.1 2.8 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain Cytidylate_kin2 PF13189.6 gi|15679634|ref|NP_276751.1| - 0.086 13.0 0.2 9.1 6.4 0.0 2.7 3 0 0 3 3 2 0 Cytidylate kinase-like family Zot PF05707.12 gi|15679634|ref|NP_276751.1| - 0.18 11.4 0.1 10 5.7 0.0 3.0 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) DEAD PF00270.29 gi|15679634|ref|NP_276751.1| - 0.2 11.4 1.1 56 3.4 0.0 3.5 2 2 1 4 4 4 0 DEAD/DEAH box helicase PDH PF02153.17 gi|15679635|ref|NP_276752.1| - 1.9e-85 286.0 0.0 2.4e-85 285.7 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.17 gi|15679635|ref|NP_276752.1| - 7.6e-11 42.4 0.0 1.7e-10 41.4 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|15679635|ref|NP_276752.1| - 4e-06 27.1 0.0 7.3e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|15679635|ref|NP_276752.1| - 0.0027 17.3 0.0 0.0054 16.3 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain B12-binding PF02310.19 gi|15679635|ref|NP_276752.1| - 0.0045 17.0 0.6 0.24 11.4 0.0 3.3 3 1 1 4 4 4 1 B12 binding domain FDX-ACB PF03147.14 gi|15679635|ref|NP_276752.1| - 0.0084 16.5 0.0 0.022 15.1 0.0 1.7 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain adh_short PF00106.25 gi|15679635|ref|NP_276752.1| - 0.014 14.9 0.0 0.026 14.0 0.0 1.5 1 0 0 1 1 1 0 short chain dehydrogenase DUF4262 PF14081.6 gi|15679635|ref|NP_276752.1| - 0.047 13.9 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4262) UDPG_MGDP_dh_C PF03720.15 gi|15679635|ref|NP_276752.1| - 0.058 13.8 0.0 12 6.4 0.0 3.0 2 1 1 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KR PF08659.10 gi|15679635|ref|NP_276752.1| - 0.14 12.0 0.1 0.44 10.5 0.0 1.8 2 0 0 2 2 2 0 KR domain DUF2642 PF10842.8 gi|15679635|ref|NP_276752.1| - 0.9 9.4 4.2 0.45 10.4 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2642) DUF5518 PF17647.1 gi|15679636|ref|NP_276753.1| - 0.00022 21.4 16.2 0.0003 20.9 16.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5518) Colicin_V PF02674.16 gi|15679636|ref|NP_276753.1| - 0.0078 16.2 3.9 0.041 13.9 0.5 2.1 2 0 0 2 2 2 2 Colicin V production protein DUF4199 PF13858.6 gi|15679636|ref|NP_276753.1| - 2.7 8.4 11.8 0.92 9.9 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) eRF1_1 PF03463.15 gi|15679637|ref|NP_276754.1| - 2.7e-30 105.0 0.1 4.9e-30 104.2 0.1 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.15 gi|15679637|ref|NP_276754.1| - 1.9e-26 92.9 0.0 3.1e-26 92.2 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|15679637|ref|NP_276754.1| - 1.3e-25 90.1 0.9 4.5e-25 88.3 0.5 2.1 2 1 0 2 2 2 1 eRF1 domain 3 Myosin_head PF00063.21 gi|15679637|ref|NP_276754.1| - 0.073 11.3 0.0 0.1 10.8 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) Radical_SAM PF04055.21 gi|15679638|ref|NP_276755.1| - 1.2e-18 68.0 0.0 4.1e-18 66.3 0.0 1.8 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679638|ref|NP_276755.1| - 4.1e-10 40.1 0.1 4.1e-10 40.1 0.1 2.8 2 1 0 2 2 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679638|ref|NP_276755.1| - 4.6e-06 26.8 0.1 4.6e-06 26.8 0.1 2.0 2 0 0 2 2 1 1 4Fe-4S single cluster domain Fer2_4 PF13510.6 gi|15679638|ref|NP_276755.1| - 1.7e-05 24.8 0.7 1.7e-05 24.8 0.7 2.3 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 gi|15679638|ref|NP_276755.1| - 4.7e-05 23.0 2.3 4.7e-05 23.0 2.3 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679638|ref|NP_276755.1| - 0.0003 20.7 4.1 0.0003 20.7 4.1 3.2 3 1 1 4 4 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679638|ref|NP_276755.1| - 0.00098 20.0 0.6 0.00098 20.0 0.6 2.9 3 0 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|15679638|ref|NP_276755.1| - 0.0056 17.5 4.2 0.0056 17.5 4.2 4.2 4 2 0 4 4 3 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15679638|ref|NP_276755.1| - 0.0079 16.6 1.3 0.0079 16.6 1.3 4.0 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679638|ref|NP_276755.1| - 0.022 14.9 4.0 0.022 14.9 4.0 3.6 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679638|ref|NP_276755.1| - 0.023 14.8 5.1 0.023 14.8 5.1 3.7 3 1 1 4 4 4 0 4Fe-4S dicluster domain DUF87 PF01935.17 gi|15679638|ref|NP_276755.1| - 0.085 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain UBA_4 PF14555.6 gi|15679638|ref|NP_276755.1| - 0.17 11.7 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain Fer4_15 PF13459.6 gi|15679638|ref|NP_276755.1| - 0.29 11.9 5.5 1.8 9.4 0.2 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain ABC1 PF03109.16 gi|15679640|ref|NP_276757.1| - 4.2e-42 143.1 0.1 1.5e-41 141.3 0.0 2.0 2 0 0 2 2 2 1 ABC1 family Pkinase PF00069.25 gi|15679640|ref|NP_276757.1| - 1.1e-05 25.0 0.2 2.4e-05 23.8 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain WaaY PF06176.11 gi|15679640|ref|NP_276757.1| - 1.2e-05 25.1 0.2 2.4e-05 24.1 0.2 1.5 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) APH PF01636.23 gi|15679640|ref|NP_276757.1| - 3.7e-05 23.8 1.1 0.00015 21.8 0.6 2.1 1 1 0 2 2 2 1 Phosphotransferase enzyme family Glyco_transf_28 PF03033.20 gi|15679641|ref|NP_276758.1| - 4.4e-07 30.0 0.2 7.8e-07 29.2 0.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_transf_4 PF13439.6 gi|15679641|ref|NP_276758.1| - 2.7e-05 24.2 0.1 5.5e-05 23.2 0.1 1.6 1 1 1 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15679641|ref|NP_276758.1| - 5.7e-05 23.6 0.8 0.00025 21.5 0.8 1.8 1 1 1 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|15679641|ref|NP_276758.1| - 0.00046 20.2 0.0 0.00084 19.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Epimerase_2 PF02350.19 gi|15679642|ref|NP_276759.1| - 1.1e-05 24.5 0.0 1.2e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_1 PF00534.20 gi|15679642|ref|NP_276759.1| - 0.0001 21.9 0.1 0.00022 20.8 0.0 1.6 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15679642|ref|NP_276759.1| - 0.00066 20.1 0.2 0.001 19.5 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15679642|ref|NP_276759.1| - 0.0091 16.4 0.1 0.015 15.7 0.1 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 RseA_N PF03872.13 gi|15679642|ref|NP_276759.1| - 0.0097 16.4 0.0 0.015 15.8 0.0 1.5 1 1 0 1 1 1 1 Anti sigma-E protein RseA, N-terminal domain Mito_fiss_Elm1 PF06258.11 gi|15679642|ref|NP_276759.1| - 0.082 12.0 0.1 0.1 11.7 0.1 1.4 1 1 0 1 1 1 0 Mitochondrial fission ELM1 Pyr_redox_2 PF07992.14 gi|15679643|ref|NP_276760.1| - 2.5e-50 171.4 0.3 3.1e-50 171.1 0.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15679643|ref|NP_276760.1| - 1.3e-17 64.0 0.0 5e-17 62.1 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15679643|ref|NP_276760.1| - 1.9e-17 63.6 1.3 4.2e-13 49.6 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15679643|ref|NP_276760.1| - 1.2e-09 37.7 2.7 0.00025 20.2 0.5 2.6 3 0 0 3 3 3 2 Glucose inhibited division protein A NAD_binding_7 PF13241.6 gi|15679643|ref|NP_276760.1| - 5.7e-07 29.9 0.3 0.0099 16.3 0.0 2.4 2 1 0 2 2 2 2 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|15679643|ref|NP_276760.1| - 1.4e-06 27.7 3.7 0.00046 19.4 0.4 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|15679643|ref|NP_276760.1| - 5.4e-06 26.0 0.2 8.6e-06 25.4 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 gi|15679643|ref|NP_276760.1| - 5.5e-05 22.6 0.3 0.17 11.3 0.0 2.2 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAO PF01266.24 gi|15679643|ref|NP_276760.1| - 0.00057 19.6 5.4 0.00089 18.9 0.4 3.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|15679643|ref|NP_276760.1| - 0.00073 18.3 0.8 0.0033 16.2 1.0 1.9 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|15679643|ref|NP_276760.1| - 0.0017 17.7 0.7 0.0022 17.3 0.2 1.5 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 gi|15679643|ref|NP_276760.1| - 0.011 15.0 0.2 0.011 15.0 0.2 1.8 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.6 gi|15679643|ref|NP_276760.1| - 0.011 15.9 0.5 0.011 15.9 0.5 2.6 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain XdhC_C PF13478.6 gi|15679643|ref|NP_276760.1| - 0.024 15.1 0.5 4.2 7.9 0.0 2.5 3 0 0 3 3 2 0 XdhC Rossmann domain AlaDh_PNT_C PF01262.21 gi|15679643|ref|NP_276760.1| - 0.03 13.6 6.6 0.68 9.2 0.5 2.6 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|15679643|ref|NP_276760.1| - 0.032 13.1 0.1 0.032 13.1 0.1 1.4 2 0 0 2 2 2 0 Tryptophan halogenase 3HCDH_N PF02737.18 gi|15679643|ref|NP_276760.1| - 0.057 13.3 0.7 1.9 8.4 0.0 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 gi|15679643|ref|NP_276760.1| - 0.061 12.5 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|15679643|ref|NP_276760.1| - 0.077 13.0 0.5 0.7 9.9 0.3 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|15679643|ref|NP_276760.1| - 0.16 11.0 0.8 0.29 10.2 0.8 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein TrkA_N PF02254.18 gi|15679643|ref|NP_276760.1| - 0.18 12.1 2.0 1.7 8.9 0.1 2.7 3 1 0 3 3 2 0 TrkA-N domain HupF_HypC PF01455.18 gi|15679644|ref|NP_276761.1| - 5.4e-25 87.3 0.2 6.5e-25 87.1 0.2 1.1 1 0 0 1 1 1 1 HupF/HypC family Peptidase_C39 PF03412.15 gi|15679646|ref|NP_276763.1| - 9.1e-12 44.9 0.0 1.9e-11 43.9 0.0 1.5 2 0 0 2 2 2 1 Peptidase C39 family DUF1642 PF07852.11 gi|15679646|ref|NP_276763.1| - 0.0092 16.6 0.4 0.014 16.0 0.4 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1642) ArsP_1 PF03773.13 gi|15679646|ref|NP_276763.1| - 0.011 14.9 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 Predicted permease MFS_MOT1 PF16983.5 gi|15679647|ref|NP_276764.1| - 0.0063 16.9 1.8 0.0063 16.9 1.8 1.8 1 1 0 2 2 2 1 Molybdate transporter of MFS superfamily DUF373 PF04123.13 gi|15679647|ref|NP_276764.1| - 0.032 13.7 11.3 0.058 12.8 11.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF373) Frag1 PF10277.9 gi|15679647|ref|NP_276764.1| - 0.11 12.0 6.9 0.14 11.7 6.9 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family PTS_EIIC PF02378.18 gi|15679647|ref|NP_276764.1| - 0.57 9.1 20.4 0.023 13.7 12.9 1.8 1 1 1 2 2 2 0 Phosphotransferase system, EIIC CPP1-like PF11833.8 gi|15679647|ref|NP_276764.1| - 2.9 7.5 12.7 3.9 7.1 12.7 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Yip1 PF04893.17 gi|15679647|ref|NP_276764.1| - 7 6.3 19.6 44 3.7 19.6 1.9 1 1 0 1 1 1 0 Yip1 domain DUF975 PF06161.11 gi|15679647|ref|NP_276764.1| - 7.8 6.2 18.2 0.64 9.8 9.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF975) Peptidase_C39 PF03412.15 gi|15679648|ref|NP_276765.1| - 9.8e-34 116.0 0.0 1.8e-33 115.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase C39 family Peptidase_C39_2 PF13529.6 gi|15679648|ref|NP_276765.1| - 0.00015 22.4 4.9 0.00044 20.8 0.2 2.7 1 1 1 2 2 2 1 Peptidase_C39 like family DUF3335 PF11814.8 gi|15679648|ref|NP_276765.1| - 0.007 15.9 0.1 0.071 12.6 0.1 2.2 1 1 1 2 2 2 1 Peptidase_C39 like family ACT PF01842.25 gi|15679649|ref|NP_276766.1| - 2.6e-06 27.1 0.1 4e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 ACT domain HTH_AsnC-type PF13404.6 gi|15679649|ref|NP_276766.1| - 0.066 13.1 0.3 0.15 11.9 0.3 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain TetR_N PF00440.23 gi|15679649|ref|NP_276766.1| - 0.29 10.9 2.1 0.98 9.3 0.3 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family Chorismate_bind PF00425.18 gi|15679650|ref|NP_276767.1| - 3.9e-95 318.3 0.4 8.1e-95 317.3 0.0 1.7 3 0 0 3 3 3 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|15679650|ref|NP_276767.1| - 3.6e-23 82.3 0.3 1.1e-22 80.8 0.2 1.8 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region GATase PF00117.28 gi|15679651|ref|NP_276768.1| - 1.5e-42 145.6 0.0 1.7e-42 145.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15679651|ref|NP_276768.1| - 3.8e-09 36.6 0.4 1.2e-07 31.7 0.4 2.1 1 1 0 1 1 1 1 Peptidase C26 IGPS PF00218.21 gi|15679652|ref|NP_276769.1| - 1.2e-62 211.4 0.0 1.4e-62 211.2 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.19 gi|15679652|ref|NP_276769.1| - 0.0052 16.6 0.0 0.0096 15.7 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain FMN_dh PF01070.18 gi|15679652|ref|NP_276769.1| - 0.037 13.1 0.0 0.055 12.5 0.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase ThiG PF05690.14 gi|15679652|ref|NP_276769.1| - 0.057 12.7 0.0 0.098 11.9 0.0 1.3 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|15679652|ref|NP_276769.1| - 0.12 11.5 0.0 0.21 10.8 0.0 1.4 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase PRAI PF00697.22 gi|15679653|ref|NP_276770.1| - 9.8e-18 64.6 0.0 1.3e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PALP PF00291.25 gi|15679654|ref|NP_276771.1| - 2.3e-43 148.7 0.4 2.7e-43 148.5 0.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|15679655|ref|NP_276772.1| - 5.3e-89 297.5 0.0 6.7e-89 297.2 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|15679655|ref|NP_276772.1| - 1.8e-08 34.1 0.1 7.8e-08 32.1 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.17 gi|15679655|ref|NP_276772.1| - 0.00026 20.5 0.4 0.073 12.5 0.1 2.4 2 0 0 2 2 2 2 PcrB family NMO PF03060.15 gi|15679655|ref|NP_276772.1| - 0.0013 18.2 0.6 0.48 9.7 0.4 2.4 1 1 0 2 2 2 2 Nitronate monooxygenase IMPDH PF00478.25 gi|15679655|ref|NP_276772.1| - 0.0013 17.8 0.0 0.038 13.0 0.0 2.4 2 1 1 3 3 3 1 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|15679655|ref|NP_276772.1| - 0.0015 17.8 0.0 0.0036 16.5 0.0 1.7 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|15679655|ref|NP_276772.1| - 0.0026 17.1 0.3 0.0051 16.1 0.1 1.7 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG GDPD PF03009.17 gi|15679655|ref|NP_276772.1| - 0.0073 16.1 0.0 0.048 13.4 0.0 2.0 2 0 0 2 2 2 1 Glycerophosphoryl diester phosphodiesterase family TMP-TENI PF02581.17 gi|15679655|ref|NP_276772.1| - 0.0085 15.4 0.0 0.032 13.6 0.0 2.0 2 0 0 2 2 2 1 Thiamine monophosphate synthase BtpA PF03437.15 gi|15679655|ref|NP_276772.1| - 0.0097 15.4 0.1 0.048 13.1 0.0 2.2 3 1 0 3 3 3 1 BtpA family FMN_dh PF01070.18 gi|15679655|ref|NP_276772.1| - 0.011 14.8 0.0 0.045 12.8 0.0 2.1 2 1 1 3 3 3 0 FMN-dependent dehydrogenase PA PF02225.22 gi|15679655|ref|NP_276772.1| - 0.031 14.3 0.1 4.9 7.3 0.1 2.6 3 0 0 3 3 3 0 PA domain Dus PF01207.17 gi|15679655|ref|NP_276772.1| - 0.039 13.0 0.0 0.29 10.2 0.0 2.0 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) IGPS PF00218.21 gi|15679655|ref|NP_276772.1| - 0.073 12.2 0.1 0.16 11.1 0.0 1.5 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase HMGL-like PF00682.19 gi|15679655|ref|NP_276772.1| - 0.086 12.4 0.0 0.23 11.0 0.0 1.7 1 0 0 1 1 1 0 HMGL-like Amidohydro_2 PF04909.14 gi|15679655|ref|NP_276772.1| - 0.12 12.1 1.2 2.5 7.8 0.2 2.7 2 1 1 3 3 3 0 Amidohydrolase Glycos_transf_3 PF00591.21 gi|15679656|ref|NP_276773.1| - 2.7e-78 263.1 0.4 2.7e-78 263.1 0.4 1.4 2 0 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|15679656|ref|NP_276773.1| - 9.4e-19 67.0 2.2 2.3e-18 65.8 2.2 1.7 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain AAA_17 PF13207.6 gi|15679657|ref|NP_276774.1| - 2.2e-18 67.0 0.0 2.8e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15679657|ref|NP_276774.1| - 3.1e-07 31.0 0.0 5.9e-07 30.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15679657|ref|NP_276774.1| - 0.00011 22.6 0.0 0.00031 21.2 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 gi|15679657|ref|NP_276774.1| - 0.00014 21.6 0.0 0.13 11.9 0.0 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_30 PF13604.6 gi|15679657|ref|NP_276774.1| - 0.0028 17.4 0.0 0.004 16.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15679657|ref|NP_276774.1| - 0.0035 17.9 0.0 0.009 16.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_28 PF13521.6 gi|15679657|ref|NP_276774.1| - 0.011 16.0 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain ADK PF00406.22 gi|15679657|ref|NP_276774.1| - 0.014 15.5 0.0 0.22 11.6 0.0 2.1 2 0 0 2 2 2 0 Adenylate kinase AAA_16 PF13191.6 gi|15679657|ref|NP_276774.1| - 0.019 15.4 1.5 0.051 13.9 1.1 1.9 1 1 1 2 2 2 0 AAA ATPase domain ATPase PF06745.13 gi|15679657|ref|NP_276774.1| - 0.022 14.1 0.0 0.26 10.6 0.0 2.1 2 0 0 2 2 2 0 KaiC AAA_22 PF13401.6 gi|15679657|ref|NP_276774.1| - 0.026 14.8 0.6 0.072 13.4 0.4 1.7 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 gi|15679657|ref|NP_276774.1| - 0.033 13.9 0.0 0.056 13.2 0.0 1.4 2 0 0 2 2 2 0 Cytidylate kinase AAA_33 PF13671.6 gi|15679657|ref|NP_276774.1| - 0.044 14.0 0.1 0.061 13.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain SKI PF01202.22 gi|15679657|ref|NP_276774.1| - 0.11 12.6 0.0 0.54 10.4 0.0 2.0 2 0 0 2 2 2 0 Shikimate kinase MMR_HSR1 PF01926.23 gi|15679657|ref|NP_276774.1| - 0.12 12.5 0.4 0.22 11.6 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|15679657|ref|NP_276774.1| - 0.12 12.1 0.5 0.46 10.2 0.3 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|15679657|ref|NP_276774.1| - 0.14 11.7 0.1 0.31 10.6 0.1 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 gi|15679657|ref|NP_276774.1| - 0.15 12.0 0.0 0.31 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 gi|15679657|ref|NP_276774.1| - 0.17 12.2 1.1 0.32 11.3 1.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|15679657|ref|NP_276774.1| - 0.19 11.4 0.0 0.28 10.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain FeS_assembly_P PF01883.19 gi|15679658|ref|NP_276775.1| - 8.9e-21 73.9 0.5 1.2e-20 73.4 0.5 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Apo-VLDL-II PF05418.11 gi|15679658|ref|NP_276775.1| - 0.16 12.5 2.8 0.23 12.0 1.5 2.0 2 1 1 3 3 3 0 Apovitellenin I (Apo-VLDL-II) DUF5591 PF17884.1 gi|15679659|ref|NP_276776.1| - 4.7e-42 143.4 0.0 6.8e-42 142.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) PUA PF01472.20 gi|15679659|ref|NP_276776.1| - 1.4e-14 53.8 0.2 3e-14 52.7 0.2 1.6 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|15679659|ref|NP_276776.1| - 1.9e-08 34.3 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase Glu_synthase PF01645.17 gi|15679660|ref|NP_276777.1| - 1.7e-127 425.6 0.0 2e-127 425.4 0.0 1.0 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.18 gi|15679660|ref|NP_276777.1| - 1.9e-11 43.6 1.0 2.5e-10 39.9 1.6 1.9 2 0 0 2 2 2 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|15679660|ref|NP_276777.1| - 4.3e-09 35.8 4.8 1.2e-08 34.4 4.3 1.9 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|15679660|ref|NP_276777.1| - 5.4e-08 32.6 2.2 8.3e-08 32.0 2.2 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 gi|15679660|ref|NP_276777.1| - 0.00023 20.7 0.0 0.00098 18.6 0.0 1.9 2 0 0 2 2 2 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|15679660|ref|NP_276777.1| - 0.0017 17.8 0.1 0.008 15.6 0.0 2.0 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Glu_syn_central PF04898.14 gi|15679660|ref|NP_276777.1| - 0.044 13.2 0.0 0.45 9.9 0.0 2.1 2 0 0 2 2 2 0 Glutamate synthase central domain HD PF01966.22 gi|15679662|ref|NP_276779.1| - 3.3e-16 59.6 0.1 4.5e-16 59.2 0.1 1.2 1 0 0 1 1 1 1 HD domain TFIIE_alpha PF02002.17 gi|15679663|ref|NP_276780.1| - 5e-40 135.6 4.2 5e-40 135.6 4.2 1.5 2 0 0 2 2 2 1 TFIIE alpha subunit TF_Zn_Ribbon PF08271.12 gi|15679663|ref|NP_276780.1| - 6.4e-07 28.8 1.2 1.6e-06 27.5 1.2 1.8 1 0 0 1 1 1 1 TFIIB zinc-binding HypA PF01155.19 gi|15679663|ref|NP_276780.1| - 0.0022 18.0 0.1 0.0048 16.9 0.1 1.6 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rad50_zn_hook PF04423.14 gi|15679663|ref|NP_276780.1| - 0.0042 16.9 0.1 0.0042 16.9 0.1 2.8 3 0 0 3 3 3 1 Rad50 zinc hook motif HTH_9 PF08221.11 gi|15679663|ref|NP_276780.1| - 0.031 14.4 0.0 0.14 12.2 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Aldolase PF01081.19 gi|15679663|ref|NP_276780.1| - 0.036 13.5 0.3 0.051 13.0 0.3 1.2 1 0 0 1 1 1 0 KDPG and KHG aldolase Speriolin_C PF15059.6 gi|15679663|ref|NP_276780.1| - 0.057 13.5 0.6 1.9 8.6 0.1 2.2 2 0 0 2 2 2 0 Speriolin C-terminus Rrf2 PF02082.20 gi|15679663|ref|NP_276780.1| - 0.071 13.5 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator zf-RRN7 PF11781.8 gi|15679663|ref|NP_276780.1| - 0.078 12.7 0.5 3.8 7.3 0.1 2.6 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Sulfolobus_pRN PF05584.11 gi|15679663|ref|NP_276780.1| - 0.087 12.9 1.5 0.14 12.2 0.6 1.8 1 1 1 2 2 2 0 Sulfolobus plasmid regulatory protein DNA_ligase_ZBD PF03119.16 gi|15679663|ref|NP_276780.1| - 0.14 12.2 2.3 0.24 11.5 0.0 2.5 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ISL3 PF14690.6 gi|15679663|ref|NP_276780.1| - 0.17 12.6 0.0 0.5 11.1 0.0 1.8 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 P53_tetramer PF07710.11 gi|15679663|ref|NP_276780.1| - 0.54 9.6 4.8 1.4 8.3 0.3 2.8 2 1 0 2 2 2 0 P53 tetramerisation motif zf-Mss51 PF13824.6 gi|15679663|ref|NP_276780.1| - 0.74 10.0 2.6 3.6 7.8 0.6 2.4 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 F420_ligase PF01996.16 gi|15679664|ref|NP_276781.1| - 2.5e-22 79.4 0.0 3e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase FeS PF04060.13 gi|15679665|ref|NP_276782.1| - 1e-13 50.7 1.1 2.4e-13 49.5 1.1 1.7 1 0 0 1 1 1 1 Putative Fe-S cluster cobW PF02492.19 gi|15679666|ref|NP_276783.1| - 6.1e-14 52.0 0.0 1e-13 51.2 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|15679666|ref|NP_276783.1| - 1.3e-05 24.3 0.1 0.041 12.9 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|15679666|ref|NP_276783.1| - 0.00035 20.3 0.0 0.0012 18.5 0.0 2.0 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain MobB PF03205.14 gi|15679666|ref|NP_276783.1| - 0.00055 19.8 0.2 0.0012 18.8 0.1 1.6 2 0 0 2 2 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 gi|15679666|ref|NP_276783.1| - 0.00057 20.2 0.1 0.0012 19.2 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15679666|ref|NP_276783.1| - 0.00066 20.1 0.0 0.0018 18.7 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|15679666|ref|NP_276783.1| - 0.0013 18.0 0.0 0.0021 17.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin DUF2075 PF09848.9 gi|15679666|ref|NP_276783.1| - 0.0027 17.0 0.0 0.0039 16.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CbiA PF01656.23 gi|15679666|ref|NP_276783.1| - 0.0059 16.7 0.2 0.0059 16.7 0.2 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NACHT PF05729.12 gi|15679666|ref|NP_276783.1| - 0.0076 16.2 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 NACHT domain AAA_18 PF13238.6 gi|15679666|ref|NP_276783.1| - 0.0094 16.5 0.0 0.019 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.9 gi|15679666|ref|NP_276783.1| - 0.015 14.2 0.0 0.026 13.4 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|15679666|ref|NP_276783.1| - 0.026 14.8 0.0 0.053 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain TK PF00265.18 gi|15679666|ref|NP_276783.1| - 0.026 14.4 0.0 0.063 13.1 0.0 1.6 2 0 0 2 2 2 0 Thymidine kinase AAA_33 PF13671.6 gi|15679666|ref|NP_276783.1| - 0.03 14.5 0.1 0.049 13.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|15679666|ref|NP_276783.1| - 0.031 14.0 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.15 gi|15679666|ref|NP_276783.1| - 0.034 14.1 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 NTPase KTI12 PF08433.10 gi|15679666|ref|NP_276783.1| - 0.038 13.4 0.1 0.054 12.9 0.1 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Ploopntkinase3 PF18751.1 gi|15679666|ref|NP_276783.1| - 0.044 13.7 0.0 0.067 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 T2SSE PF00437.20 gi|15679666|ref|NP_276783.1| - 0.05 12.7 0.1 0.08 12.0 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_26 PF13500.6 gi|15679666|ref|NP_276783.1| - 0.062 13.1 0.4 0.29 10.9 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|15679666|ref|NP_276783.1| - 0.068 12.7 0.1 0.12 11.9 0.1 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region MipZ PF09140.11 gi|15679666|ref|NP_276783.1| - 0.079 12.2 0.1 0.23 10.7 0.1 1.8 1 1 0 1 1 1 0 ATPase MipZ PduV-EutP PF10662.9 gi|15679666|ref|NP_276783.1| - 0.092 12.5 0.3 5.6 6.7 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 gi|15679666|ref|NP_276783.1| - 0.096 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|15679666|ref|NP_276783.1| - 0.097 13.1 0.0 0.19 12.2 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 gi|15679666|ref|NP_276783.1| - 0.11 12.3 0.5 0.33 10.7 0.1 2.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein FtsK_SpoIIIE PF01580.18 gi|15679666|ref|NP_276783.1| - 0.11 11.8 0.2 0.18 11.1 0.2 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family SRPRB PF09439.10 gi|15679666|ref|NP_276783.1| - 0.13 11.7 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Pox_A32 PF04665.12 gi|15679666|ref|NP_276783.1| - 0.13 11.7 0.0 0.29 10.5 0.0 1.6 2 0 0 2 2 2 0 Poxvirus A32 protein DnaB_C PF03796.15 gi|15679666|ref|NP_276783.1| - 0.16 11.3 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain ABC_tran PF00005.27 gi|15679667|ref|NP_276784.1| - 1.9e-14 54.3 0.1 3.7e-14 53.4 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679667|ref|NP_276784.1| - 8e-10 39.0 0.3 8.8e-05 22.4 0.0 2.9 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15679667|ref|NP_276784.1| - 0.00032 20.2 1.0 0.0092 15.4 1.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_18 PF13238.6 gi|15679667|ref|NP_276784.1| - 0.00065 20.3 0.0 0.0064 17.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain KAP_NTPase PF07693.14 gi|15679667|ref|NP_276784.1| - 0.0018 17.6 0.0 0.0032 16.8 0.0 1.7 1 1 0 1 1 1 1 KAP family P-loop domain AAA_30 PF13604.6 gi|15679667|ref|NP_276784.1| - 0.003 17.3 0.0 0.0092 15.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15679667|ref|NP_276784.1| - 0.0077 15.9 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15679667|ref|NP_276784.1| - 0.011 16.1 0.2 0.068 13.5 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15679667|ref|NP_276784.1| - 0.011 16.1 0.0 0.02 15.3 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_2 PF07724.14 gi|15679667|ref|NP_276784.1| - 0.022 14.9 0.0 0.1 12.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) ATPase_2 PF01637.18 gi|15679667|ref|NP_276784.1| - 0.035 14.0 0.0 0.082 12.8 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_23 PF13476.6 gi|15679667|ref|NP_276784.1| - 0.04 14.4 0.1 0.095 13.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_PrkA PF08298.11 gi|15679667|ref|NP_276784.1| - 0.075 11.9 0.1 0.17 10.8 0.0 1.6 2 0 0 2 2 2 0 PrkA AAA domain AAA_5 PF07728.14 gi|15679667|ref|NP_276784.1| - 0.078 13.0 0.0 5.6 7.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ComA PF02679.15 gi|15679668|ref|NP_276785.1| - 1.4e-94 316.1 0.0 1.6e-94 316.0 0.0 1.0 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) PK_C PF02887.16 gi|15679669|ref|NP_276786.1| - 5.8e-17 62.0 0.0 1.2e-16 61.0 0.0 1.5 1 1 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Tubulin PF00091.25 gi|15679670|ref|NP_276787.1| - 1.8e-41 142.5 0.3 4.8e-41 141.1 0.3 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|15679670|ref|NP_276787.1| - 5.6e-36 122.7 1.2 5.6e-36 122.7 1.2 2.1 2 1 0 2 2 2 1 FtsZ family, C-terminal domain DUF3236 PF11576.8 gi|15679670|ref|NP_276787.1| - 0.16 11.6 2.1 0.32 10.7 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3236) Tubulin_2 PF13809.6 gi|15679670|ref|NP_276787.1| - 5 6.2 7.4 0.28 10.3 1.2 2.0 2 1 0 2 2 2 0 Tubulin like SecE PF00584.20 gi|15679671|ref|NP_276788.1| - 5.1e-11 42.3 0.1 6e-11 42.1 0.1 1.0 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Spt5-NGN PF03439.13 gi|15679672|ref|NP_276789.1| - 1.8e-18 66.2 0.1 3.5e-18 65.3 0.1 1.5 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|15679672|ref|NP_276789.1| - 8e-07 28.8 0.1 2.4e-06 27.3 0.0 1.8 2 0 0 2 2 2 1 KOW motif NusG PF02357.19 gi|15679672|ref|NP_276789.1| - 0.012 16.1 0.1 0.37 11.3 0.0 2.5 2 1 0 2 2 2 0 Transcription termination factor nusG KH_5 PF13184.6 gi|15679672|ref|NP_276789.1| - 0.16 12.1 2.6 0.45 10.6 0.2 2.6 2 1 1 3 3 3 0 NusA-like KH domain Ribosomal_L11_N PF03946.14 gi|15679673|ref|NP_276790.1| - 8.8e-25 86.3 1.2 1.3e-24 85.8 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|15679673|ref|NP_276790.1| - 4.3e-21 75.2 0.1 7.3e-21 74.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 gi|15679674|ref|NP_276791.1| - 3.5e-47 160.8 1.2 4.2e-47 160.5 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family IL32 PF15225.6 gi|15679674|ref|NP_276791.1| - 0.028 14.8 0.1 0.062 13.7 0.0 1.6 2 0 0 2 2 2 0 Interleukin 32 Ribosomal_S30AE PF02482.19 gi|15679674|ref|NP_276791.1| - 0.063 14.1 0.3 1.2 10.0 0.1 2.2 2 0 0 2 2 2 0 Sigma 54 modulation protein / S30EA ribosomal protein DUF1892 PF08987.10 gi|15679674|ref|NP_276791.1| - 0.066 13.4 0.1 0.15 12.2 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1892) DUF4695 PF15766.5 gi|15679674|ref|NP_276791.1| - 0.22 11.7 2.1 0.34 11.1 0.2 2.3 3 1 0 3 3 3 0 Domain of unknown function (DUF4695) LUC7 PF03194.15 gi|15679674|ref|NP_276791.1| - 0.53 9.9 2.4 4 7.0 0.0 2.3 2 1 0 2 2 2 0 LUC7 N_terminus Ribosomal_L10 PF00466.20 gi|15679675|ref|NP_276792.1| - 9e-24 83.5 0.6 2.4e-23 82.1 0.1 2.0 2 0 0 2 2 2 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|15679675|ref|NP_276792.1| - 4.3e-22 77.9 0.1 1e-21 76.7 0.1 1.7 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|15679675|ref|NP_276792.1| - 0.011 16.3 30.8 0.85 10.2 30.8 2.9 1 1 0 1 1 1 0 60s Acidic ribosomal protein DUF3884 PF13024.6 gi|15679675|ref|NP_276792.1| - 0.21 11.2 0.0 0.39 10.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) RNA_pol_3_Rpc31 PF11705.8 gi|15679675|ref|NP_276792.1| - 0.21 11.8 6.2 0.22 11.8 4.8 1.7 2 0 0 2 2 2 0 DNA-directed RNA polymerase III subunit Rpc31 DUF1697 PF08002.11 gi|15679675|ref|NP_276792.1| - 0.27 11.7 0.2 0.27 11.7 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1697) ADP_ribosyl_GH PF03747.14 gi|15679675|ref|NP_276792.1| - 1 9.1 3.8 1.6 8.4 3.8 1.2 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase Ribosomal_60s PF00428.19 gi|15679676|ref|NP_276793.1| - 3.4e-18 66.0 28.7 4e-18 65.8 28.7 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein YceD PF02620.17 gi|15679676|ref|NP_276793.1| - 0.019 15.1 3.2 0.023 14.8 3.2 1.2 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD EF-hand_14 PF17959.1 gi|15679676|ref|NP_276793.1| - 0.019 15.3 0.2 0.032 14.6 0.0 1.4 2 0 0 2 2 2 0 EF-hand domain PepSY_2 PF13670.6 gi|15679676|ref|NP_276793.1| - 0.036 14.1 11.2 2.5 8.2 0.0 2.1 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain PhetRS_B1 PF18262.1 gi|15679676|ref|NP_276793.1| - 0.33 11.2 0.0 0.33 11.2 0.0 1.9 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain RRN3 PF05327.11 gi|15679676|ref|NP_276793.1| - 0.51 8.8 2.0 0.59 8.6 2.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 CDC45 PF02724.14 gi|15679676|ref|NP_276793.1| - 0.59 8.3 4.0 0.65 8.2 4.0 1.0 1 0 0 1 1 1 0 CDC45-like protein Paf1 PF03985.13 gi|15679676|ref|NP_276793.1| - 0.81 8.6 6.6 0.9 8.5 6.6 1.1 1 0 0 1 1 1 0 Paf1 RNA_pol_3_Rpc31 PF11705.8 gi|15679676|ref|NP_276793.1| - 1.5 9.1 7.7 1.7 8.9 7.7 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF3391 PF11871.8 gi|15679676|ref|NP_276793.1| - 9 6.8 8.6 12 6.5 8.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3391) THOC2_N PF16134.5 gi|15679676|ref|NP_276793.1| - 9.7 4.7 5.9 11 4.5 5.9 1.0 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus tRNA-synt_2c PF01411.19 gi|15679677|ref|NP_276794.1| - 1.2e-157 525.8 0.0 1.5e-157 525.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|15679677|ref|NP_276794.1| - 1.8e-22 80.3 2.5 3.5e-22 79.3 2.5 1.5 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 gi|15679677|ref|NP_276794.1| - 7.1e-13 48.4 4.0 1.4e-12 47.5 1.8 2.6 3 0 0 3 3 3 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2e PF02091.15 gi|15679677|ref|NP_276794.1| - 0.0022 17.3 0.0 0.0039 16.5 0.0 1.4 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit HcyBio PF01837.16 gi|15679678|ref|NP_276795.1| - 4.2e-109 364.6 0.0 4.7e-109 364.4 0.0 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4 PF00037.27 gi|15679678|ref|NP_276795.1| - 2e-07 30.5 11.4 1e-05 25.1 1.3 3.3 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679678|ref|NP_276795.1| - 2.1e-07 31.4 4.9 0.0035 17.9 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679678|ref|NP_276795.1| - 4e-06 26.9 12.8 0.00026 21.2 2.0 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679678|ref|NP_276795.1| - 9.6e-06 25.7 3.5 0.069 13.3 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679678|ref|NP_276795.1| - 3.6e-05 23.6 14.1 0.0014 18.6 1.5 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679678|ref|NP_276795.1| - 0.00049 20.2 11.8 0.0084 16.2 1.0 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679678|ref|NP_276795.1| - 0.00052 20.0 16.2 0.014 15.5 3.0 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679678|ref|NP_276795.1| - 0.0037 18.2 8.0 0.16 12.9 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|15679678|ref|NP_276795.1| - 0.0049 17.3 4.2 0.12 12.9 0.5 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679678|ref|NP_276795.1| - 0.008 16.4 2.6 0.014 15.6 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679678|ref|NP_276795.1| - 0.042 14.4 0.6 0.042 14.4 0.6 3.3 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|15679678|ref|NP_276795.1| - 0.044 13.9 10.1 3.2 7.9 10.4 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679678|ref|NP_276795.1| - 0.052 14.1 10.0 0.25 11.9 1.2 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain ThiI PF02568.14 gi|15679679|ref|NP_276796.1| - 4.2e-86 287.6 0.0 5.3e-86 287.2 0.0 1.1 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|15679679|ref|NP_276796.1| - 2.5e-25 89.2 0.1 6.5e-25 87.9 0.0 1.7 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|15679679|ref|NP_276796.1| - 3e-07 30.2 0.0 0.00037 20.1 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|15679679|ref|NP_276796.1| - 1.1e-06 27.7 0.0 1.7e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|15679679|ref|NP_276796.1| - 0.015 14.4 0.0 0.036 13.2 0.0 1.6 2 0 0 2 2 2 0 NAD synthase Asn_synthase PF00733.21 gi|15679679|ref|NP_276796.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase ATP_bind_3 PF01171.20 gi|15679679|ref|NP_276796.1| - 0.18 11.5 0.0 2.2 8.0 0.0 2.1 2 0 0 2 2 2 0 PP-loop family FBPase_3 PF01950.16 gi|15679680|ref|NP_276797.1| - 1.1e-187 623.5 0.0 1.3e-187 623.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase DUF5616 PF18481.1 gi|15679681|ref|NP_276798.1| - 2.9e-45 154.1 0.0 3.2e-45 153.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|15679682|ref|NP_276799.1| - 1.6e-25 88.6 2.7 1.8e-25 88.3 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF434) PhoU_div PF01865.16 gi|15679683|ref|NP_276800.1| - 9.3e-80 267.0 10.8 1e-79 266.8 10.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|15679683|ref|NP_276800.1| - 0.0024 18.3 8.7 0.12 12.8 2.2 2.3 2 0 0 2 2 2 2 PhoU domain APS_kinase PF01583.20 gi|15679683|ref|NP_276800.1| - 0.09 12.7 0.2 0.31 10.9 0.1 2.0 1 1 1 2 2 2 0 Adenylylsulphate kinase DUF357 PF04010.13 gi|15679684|ref|NP_276801.1| - 7.7e-18 64.3 0.1 8.8e-18 64.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) CDP-OH_P_transf PF01066.21 gi|15679685|ref|NP_276802.1| - 1.2e-08 35.6 2.7 1.2e-08 35.6 2.7 2.7 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase Sua5_yciO_yrdC PF01300.18 gi|15679686|ref|NP_276803.1| - 1.1e-49 168.4 0.0 1.3e-49 168.2 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Rad51 PF08423.11 gi|15679687|ref|NP_276804.1| - 6.1e-21 74.8 0.0 7.6e-21 74.5 0.0 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|15679687|ref|NP_276804.1| - 3.8e-12 46.2 0.0 5.2e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|15679687|ref|NP_276804.1| - 5.1e-08 32.5 0.3 1.5e-07 31.0 0.3 1.8 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 gi|15679687|ref|NP_276804.1| - 7.2e-08 32.4 0.0 1.1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|15679687|ref|NP_276804.1| - 2.5e-07 30.5 0.0 4.5e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Zot PF05707.12 gi|15679687|ref|NP_276804.1| - 1.4e-06 28.1 0.0 1.8e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) IstB_IS21 PF01695.17 gi|15679687|ref|NP_276804.1| - 0.00056 19.7 0.0 0.00099 18.9 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein CbiA PF01656.23 gi|15679687|ref|NP_276804.1| - 0.00059 19.9 0.0 0.0008 19.5 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA PF00004.29 gi|15679687|ref|NP_276804.1| - 0.002 18.5 0.0 0.0031 18.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 gi|15679687|ref|NP_276804.1| - 0.0083 15.6 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein TrwB_AAD_bind PF10412.9 gi|15679687|ref|NP_276804.1| - 0.027 13.4 0.1 0.044 12.7 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATPase_2 PF01637.18 gi|15679687|ref|NP_276804.1| - 0.029 14.3 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 gi|15679687|ref|NP_276804.1| - 0.053 12.8 0.2 0.25 10.6 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 gi|15679687|ref|NP_276804.1| - 0.091 13.0 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|15679687|ref|NP_276804.1| - 0.13 11.9 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_11 PF13086.6 gi|15679687|ref|NP_276804.1| - 0.15 11.8 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Aminotran_1_2 PF00155.21 gi|15679688|ref|NP_276805.1| - 2e-36 125.9 0.0 2.3e-36 125.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15679688|ref|NP_276805.1| - 4.2e-05 22.7 0.0 0.14 11.1 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Alliinase_C PF04864.13 gi|15679688|ref|NP_276805.1| - 0.0015 17.5 0.0 0.007 15.3 0.0 1.9 2 0 0 2 2 2 1 Allinase CBP_BcsR PF10945.8 gi|15679688|ref|NP_276805.1| - 0.13 11.8 0.3 0.32 10.5 0.3 1.6 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR DUF2848 PF11010.8 gi|15679688|ref|NP_276805.1| - 0.15 11.6 0.0 1.9 8.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2848) ABC_tran PF00005.27 gi|15679689|ref|NP_276806.1| - 5.4e-41 140.3 0.0 9.8e-20 71.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|15679689|ref|NP_276806.1| - 3.1e-13 50.2 3.6 0.0031 17.4 0.3 4.2 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15679689|ref|NP_276806.1| - 1.4e-10 41.0 6.4 1.3e-05 24.7 0.8 3.8 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|15679689|ref|NP_276806.1| - 1.7e-10 40.5 2.2 3.6e-10 39.5 2.2 1.6 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.27 gi|15679689|ref|NP_276806.1| - 1.2e-06 28.0 1.9 1.2e-06 28.0 1.9 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA PF00004.29 gi|15679689|ref|NP_276806.1| - 3.8e-06 27.3 0.1 0.19 12.1 0.0 3.2 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|15679689|ref|NP_276806.1| - 7.6e-05 22.6 0.6 0.33 10.6 0.1 2.4 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|15679689|ref|NP_276806.1| - 0.00011 22.2 0.0 0.091 12.7 0.0 2.7 3 0 0 3 3 2 1 RsgA GTPase AAA_24 PF13479.6 gi|15679689|ref|NP_276806.1| - 0.00015 21.5 0.1 0.2 11.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 gi|15679689|ref|NP_276806.1| - 0.00029 20.6 0.1 1.3 8.7 0.0 2.9 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_23 PF13476.6 gi|15679689|ref|NP_276806.1| - 0.0003 21.3 0.1 0.21 12.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|15679689|ref|NP_276806.1| - 0.00045 20.2 0.0 0.079 12.9 0.0 2.5 2 0 0 2 2 2 1 Rad17 P-loop domain Fer4_21 PF14697.6 gi|15679689|ref|NP_276806.1| - 0.00084 19.4 8.7 0.0015 18.6 8.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679689|ref|NP_276806.1| - 0.00085 19.4 0.8 0.00085 19.4 0.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain RNA_helicase PF00910.22 gi|15679689|ref|NP_276806.1| - 0.0012 19.2 0.1 2.1 8.8 0.1 2.5 2 0 0 2 2 2 2 RNA helicase Fer4_7 PF12838.7 gi|15679689|ref|NP_276806.1| - 0.0014 19.2 7.3 0.0029 18.1 7.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679689|ref|NP_276806.1| - 0.0016 18.4 1.6 0.0016 18.4 1.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_33 PF13671.6 gi|15679689|ref|NP_276806.1| - 0.0018 18.5 0.5 2.4 8.3 0.0 3.1 3 1 0 3 3 3 1 AAA domain Fer4_9 PF13187.6 gi|15679689|ref|NP_276806.1| - 0.0019 18.4 9.3 0.0033 17.6 9.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_22 PF13401.6 gi|15679689|ref|NP_276806.1| - 0.0026 18.1 0.0 1.3 9.3 0.0 2.8 2 1 0 2 2 2 1 AAA domain Fer4_2 PF12797.7 gi|15679689|ref|NP_276806.1| - 0.0042 17.1 1.3 0.0042 17.1 1.3 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_29 PF13555.6 gi|15679689|ref|NP_276806.1| - 0.0053 16.5 0.3 0.27 11.0 0.1 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|15679689|ref|NP_276806.1| - 0.0092 16.5 0.0 1.9 9.0 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15679689|ref|NP_276806.1| - 0.012 16.0 0.2 0.32 11.4 0.1 2.6 2 1 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 gi|15679689|ref|NP_276806.1| - 0.012 15.5 0.0 5.2 7.0 0.0 2.6 2 0 0 2 2 2 0 NACHT domain TsaE PF02367.17 gi|15679689|ref|NP_276806.1| - 0.019 15.0 0.0 7.1 6.7 0.0 2.8 3 0 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|15679689|ref|NP_276806.1| - 0.021 14.3 0.5 1.4 8.4 0.0 3.1 3 0 0 3 3 3 0 PhoH-like protein Fer4_16 PF13484.6 gi|15679689|ref|NP_276806.1| - 0.03 15.2 8.4 0.13 13.2 2.0 2.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain AAA_25 PF13481.6 gi|15679689|ref|NP_276806.1| - 0.032 13.8 0.4 3.2 7.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|15679689|ref|NP_276806.1| - 0.038 14.0 0.3 2.3 8.2 0.1 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_13 PF13166.6 gi|15679689|ref|NP_276806.1| - 0.047 12.3 0.0 0.37 9.4 0.1 1.9 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|15679689|ref|NP_276806.1| - 0.051 12.8 0.1 3.3 6.8 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_28 PF13521.6 gi|15679689|ref|NP_276806.1| - 0.068 13.4 0.1 15 5.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|15679689|ref|NP_276806.1| - 0.086 12.9 0.1 29 4.7 0.0 3.5 3 1 0 3 3 2 0 AAA domain IstB_IS21 PF01695.17 gi|15679689|ref|NP_276806.1| - 0.14 11.8 0.8 13 5.4 0.0 2.7 3 0 0 3 3 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 gi|15679689|ref|NP_276806.1| - 0.17 12.0 0.0 3.1 7.9 0.0 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase SRP54 PF00448.22 gi|15679689|ref|NP_276806.1| - 0.17 11.5 0.2 4.3 6.9 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|15679689|ref|NP_276806.1| - 0.21 11.5 2.2 12 5.7 0.0 3.3 3 0 0 3 3 3 0 NTPase AAA_30 PF13604.6 gi|15679689|ref|NP_276806.1| - 0.24 11.1 0.2 6.5 6.4 0.0 2.7 3 1 0 3 3 3 0 AAA domain CBFD_NFYB_HMF PF00808.23 gi|15679690|ref|NP_276807.1| - 1.7e-21 76.2 1.2 1.9e-21 76.1 1.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|15679690|ref|NP_276807.1| - 1.5e-11 44.8 0.1 1.6e-11 44.7 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.17 gi|15679690|ref|NP_276807.1| - 6.3e-08 32.7 0.5 6.6e-08 32.6 0.5 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T_C PF15511.6 gi|15679690|ref|NP_276807.1| - 4.2e-07 30.1 0.1 4.6e-07 29.9 0.1 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 gi|15679690|ref|NP_276807.1| - 7e-06 26.3 0.0 7.6e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TFIID_20kDa PF03847.13 gi|15679690|ref|NP_276807.1| - 4.7e-05 23.8 0.1 5.3e-05 23.6 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 gi|15679690|ref|NP_276807.1| - 0.0015 18.5 0.0 0.0017 18.3 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID-31kDa PF02291.15 gi|15679690|ref|NP_276807.1| - 0.005 16.9 0.0 0.0056 16.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DUF1931 PF09123.11 gi|15679690|ref|NP_276807.1| - 0.041 14.0 0.3 0.048 13.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) PTH2 PF01981.16 gi|15679691|ref|NP_276808.1| - 8.4e-42 142.2 0.0 9.3e-42 142.0 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 AA_kinase PF00696.28 gi|15679692|ref|NP_276809.1| - 1.6e-20 73.8 0.1 8.1e-19 68.2 0.1 2.0 1 1 0 1 1 1 1 Amino acid kinase family DUF1610 PF07754.11 gi|15679901|ref|NP_276810.1| - 6.4e-06 26.0 1.4 6.4e-06 26.0 1.4 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.6 gi|15679901|ref|NP_276810.1| - 0.032 13.9 0.6 0.032 13.9 0.6 3.4 3 1 0 3 3 3 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|15679901|ref|NP_276810.1| - 0.046 13.7 9.4 0.063 13.3 9.4 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-ACC PF17848.1 gi|15679901|ref|NP_276810.1| - 0.068 13.2 1.0 0.068 13.2 1.0 3.2 2 1 1 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf-CCHC_6 PF15288.6 gi|15679901|ref|NP_276810.1| - 0.081 12.8 5.5 0.081 12.8 5.5 2.4 3 0 0 3 3 3 0 Zinc knuckle tRNA-synt_1g PF09334.11 gi|15679901|ref|NP_276810.1| - 0.13 11.0 4.4 0.13 11.0 4.4 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) DUF1451 PF07295.11 gi|15679901|ref|NP_276810.1| - 1.4 8.9 7.7 2.1 8.3 7.1 1.6 1 1 0 1 1 1 0 Zinc-ribbon containing domain RNHCP PF12647.7 gi|15679901|ref|NP_276810.1| - 3 7.9 9.8 5 7.2 1.2 2.3 1 1 1 2 2 2 0 RNHCP domain zf-Mss51 PF13824.6 gi|15679901|ref|NP_276810.1| - 3.2 7.9 9.2 2.5 8.3 7.3 2.0 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF530 PF04409.12 gi|15679901|ref|NP_276810.1| - 4.3 5.6 4.7 4.8 5.4 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF530) zinc_ribbon_10 PF10058.9 gi|15679901|ref|NP_276810.1| - 5.7 6.8 14.7 0.21 11.4 1.6 2.9 1 1 2 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_ribbon_SprT PF17283.2 gi|15679901|ref|NP_276810.1| - 9.4 6.2 20.6 21 5.1 2.0 3.9 2 1 1 3 3 3 0 SprT-like zinc ribbon domain EF1_GNE PF00736.19 gi|15679693|ref|NP_276811.1| - 4.9e-21 74.7 0.4 5.4e-21 74.6 0.4 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain TctA PF01970.16 gi|15679694|ref|NP_276812.1| - 2.7e-53 181.2 42.7 3.3e-53 180.9 42.7 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family PrmA PF06325.13 gi|15679695|ref|NP_276813.1| - 7.8e-06 25.5 0.0 1.1e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|15679695|ref|NP_276813.1| - 2.2e-05 25.1 0.0 4.7e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 gi|15679695|ref|NP_276813.1| - 3.5e-05 23.2 0.0 4.7e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase MTS PF05175.14 gi|15679695|ref|NP_276813.1| - 6e-05 22.6 0.0 9.1e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|15679695|ref|NP_276813.1| - 0.00089 18.9 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Met_10 PF02475.16 gi|15679695|ref|NP_276813.1| - 0.062 13.0 0.0 0.14 11.9 0.0 1.5 1 1 0 1 1 1 0 Met-10+ like-protein Methyltransf_31 PF13847.6 gi|15679695|ref|NP_276813.1| - 0.1 12.4 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain T2SSE PF00437.20 gi|15679696|ref|NP_276814.1| - 5.5e-62 209.3 0.3 9.7e-62 208.5 0.1 1.4 2 0 0 2 2 2 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|15679696|ref|NP_276814.1| - 1.4e-05 24.6 0.7 0.0055 16.1 0.0 3.2 3 0 0 3 3 3 1 FtsK/SpoIIIE family Zeta_toxin PF06414.12 gi|15679696|ref|NP_276814.1| - 0.002 17.4 0.0 0.0051 16.1 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin ABC_tran PF00005.27 gi|15679696|ref|NP_276814.1| - 0.0085 16.6 0.0 0.024 15.2 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_19 PF13245.6 gi|15679696|ref|NP_276814.1| - 0.077 13.3 0.4 0.2 12.0 0.4 1.6 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|15679696|ref|NP_276814.1| - 0.16 11.8 0.1 0.38 10.5 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15679696|ref|NP_276814.1| - 0.17 12.2 0.1 1.6 9.0 0.0 2.6 2 1 0 2 2 2 0 AAA domain T2SSF PF00482.23 gi|15679697|ref|NP_276815.1| - 2.4e-23 82.5 0.6 4.7e-23 81.5 0.8 4.0 3 1 1 4 4 4 2 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 gi|15679697|ref|NP_276815.1| - 3.9e-09 35.8 1.3 0.0016 17.3 0.7 2.0 2 0 0 2 2 2 2 Predicted membrane protein (DUF2207) TrbL PF04610.14 gi|15679697|ref|NP_276815.1| - 0.00063 19.6 10.5 0.019 14.8 4.1 2.1 2 0 0 2 2 2 2 TrbL/VirB6 plasmid conjugal transfer protein MgtE PF01769.16 gi|15679697|ref|NP_276815.1| - 0.013 15.8 7.2 1.2 9.5 3.1 2.2 2 0 0 2 2 2 0 Divalent cation transporter Phage_holin_3_6 PF07332.11 gi|15679697|ref|NP_276815.1| - 0.099 12.7 9.4 0.5 10.4 0.5 2.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Spore_III_AB PF09548.10 gi|15679697|ref|NP_276815.1| - 0.14 12.2 6.4 1.3 9.1 0.2 2.8 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF2304 PF10066.9 gi|15679697|ref|NP_276815.1| - 3.8 7.8 13.2 2.4 8.4 5.3 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) ABC_tran PF00005.27 gi|15679698|ref|NP_276816.1| - 3.7e-34 118.2 0.0 6.6e-34 117.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679698|ref|NP_276816.1| - 4.1e-16 59.7 0.6 5.8e-11 42.7 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15679698|ref|NP_276816.1| - 2e-07 30.7 0.0 7.6e-06 25.5 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15679698|ref|NP_276816.1| - 0.00018 21.4 0.0 0.23 11.2 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|15679698|ref|NP_276816.1| - 0.0019 17.9 0.0 0.0036 17.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|15679698|ref|NP_276816.1| - 0.049 13.5 0.0 0.16 11.8 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_23 PF13476.6 gi|15679698|ref|NP_276816.1| - 0.054 14.0 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain BCA_ABC_TP_C PF12399.8 gi|15679698|ref|NP_276816.1| - 0.056 13.4 0.6 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter AAA_25 PF13481.6 gi|15679698|ref|NP_276816.1| - 0.073 12.6 0.0 0.18 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|15679698|ref|NP_276816.1| - 0.16 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|15679698|ref|NP_276816.1| - 0.18 12.0 0.0 2.5 8.4 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|15679698|ref|NP_276816.1| - 0.19 11.8 0.0 0.44 10.6 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase CbiQ PF02361.16 gi|15679699|ref|NP_276817.1| - 2.5e-60 203.8 9.2 3.5e-60 203.3 9.2 1.2 1 0 0 1 1 1 1 Cobalt transport protein PDGLE PF13190.6 gi|15679700|ref|NP_276818.1| - 1.9e-17 62.9 0.4 8.6e-17 60.8 0.4 1.8 1 1 0 1 1 1 1 PDGLE domain Yip1 PF04893.17 gi|15679700|ref|NP_276818.1| - 0.00086 19.1 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 Yip1 domain OppC_N PF12911.7 gi|15679700|ref|NP_276818.1| - 0.0013 18.6 3.6 0.019 14.9 0.0 2.2 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C ABC2_membrane_2 PF12679.7 gi|15679700|ref|NP_276818.1| - 0.16 11.2 0.4 0.45 9.7 0.5 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein FeoB_associated PF12669.7 gi|15679700|ref|NP_276818.1| - 6.5 7.2 8.8 6.3 7.3 0.3 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein CbiM PF01891.16 gi|15679701|ref|NP_276819.1| - 1.7e-58 197.9 22.4 1.9e-58 197.7 22.4 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region CitMHS PF03600.16 gi|15679701|ref|NP_276819.1| - 0.72 9.0 19.9 1.1 8.3 19.9 1.3 1 0 0 1 1 1 0 Citrate transporter Prismane PF03063.20 gi|15679702|ref|NP_276820.1| - 9.4e-101 338.0 6.8 1.4e-84 284.6 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_9 PF13187.6 gi|15679702|ref|NP_276820.1| - 2.5e-07 30.7 10.0 2.5e-07 30.7 10.0 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679702|ref|NP_276820.1| - 4.6e-05 23.9 14.4 0.003 18.1 0.1 3.6 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679702|ref|NP_276820.1| - 5.5e-05 23.7 9.2 5.5e-05 23.7 9.2 2.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679702|ref|NP_276820.1| - 0.00048 20.2 8.6 0.00048 20.2 8.6 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679702|ref|NP_276820.1| - 0.001 19.4 21.6 0.0014 19.0 11.7 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15679702|ref|NP_276820.1| - 0.0079 16.0 2.0 0.0079 16.0 2.0 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679702|ref|NP_276820.1| - 0.04 14.8 12.5 0.15 13.0 0.2 4.0 4 0 0 4 4 4 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15679702|ref|NP_276820.1| - 1.1 9.9 11.1 1.7 9.3 1.8 3.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15679702|ref|NP_276820.1| - 1.7 9.5 14.3 0.42 11.5 0.4 3.0 3 0 0 3 3 3 0 4Fe-4S dicluster domain CO_dh PF02552.16 gi|15679703|ref|NP_276821.1| - 3.2e-67 225.5 0.0 3.6e-67 225.3 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|15679703|ref|NP_276821.1| - 3.1e-08 33.4 0.0 8.6e-08 32.0 0.0 1.6 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain PEP-utilizers PF00391.23 gi|15679703|ref|NP_276821.1| - 0.11 12.2 0.2 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain CdhC PF03598.15 gi|15679704|ref|NP_276822.1| - 3.5e-63 212.1 0.5 5.1e-63 211.6 0.5 1.2 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DNA_pol3_a_NII PF11490.8 gi|15679704|ref|NP_276822.1| - 0.55 10.1 5.1 0.72 9.8 0.0 2.6 3 0 0 3 3 3 0 DNA polymerase III polC-type N-terminus II CbiA PF01656.23 gi|15679705|ref|NP_276823.1| - 2.9e-22 79.1 0.0 3.9e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15679705|ref|NP_276823.1| - 1.5e-16 60.8 0.0 2.3e-16 60.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|15679705|ref|NP_276823.1| - 4e-13 49.4 0.6 3e-11 43.2 0.6 2.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|15679705|ref|NP_276823.1| - 2.3e-09 37.1 0.0 1.3e-08 34.7 0.0 1.9 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|15679705|ref|NP_276823.1| - 9.3e-09 34.9 1.6 3.9e-08 32.8 0.6 2.3 1 1 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|15679705|ref|NP_276823.1| - 3.7e-06 26.4 0.7 0.025 13.9 0.2 2.2 2 0 0 2 2 2 2 ATPase MipZ Fer4_NifH PF00142.18 gi|15679705|ref|NP_276823.1| - 4.7e-06 26.3 0.0 0.0013 18.3 0.0 2.3 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|15679705|ref|NP_276823.1| - 0.00014 21.7 0.0 0.00052 19.8 0.0 1.8 1 1 1 2 2 2 1 AAA domain SRP54 PF00448.22 gi|15679705|ref|NP_276823.1| - 0.014 15.0 0.2 3.5 7.2 0.1 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Toprim PF01751.22 gi|15679705|ref|NP_276823.1| - 0.016 15.5 0.0 0.039 14.2 0.0 1.8 1 1 0 1 1 1 0 Toprim domain AAA_25 PF13481.6 gi|15679705|ref|NP_276823.1| - 0.017 14.7 1.3 0.074 12.6 1.4 2.1 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 gi|15679705|ref|NP_276823.1| - 0.022 14.6 0.1 0.062 13.2 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.17 gi|15679705|ref|NP_276823.1| - 0.029 14.5 1.4 0.096 12.8 0.5 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain VirC1 PF07015.11 gi|15679705|ref|NP_276823.1| - 0.029 13.6 0.1 0.88 8.8 0.0 2.1 2 0 0 2 2 2 0 VirC1 protein PIF1 PF05970.14 gi|15679705|ref|NP_276823.1| - 0.033 13.4 0.2 0.068 12.3 0.1 1.5 2 0 0 2 2 2 0 PIF1-like helicase AAA_30 PF13604.6 gi|15679705|ref|NP_276823.1| - 0.063 13.0 0.0 0.095 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Toprim_4 PF13662.6 gi|15679705|ref|NP_276823.1| - 0.07 13.6 0.0 0.18 12.3 0.0 1.7 1 0 0 1 1 1 0 Toprim domain ATPase PF06745.13 gi|15679705|ref|NP_276823.1| - 0.077 12.3 0.1 0.2 10.9 0.0 1.6 2 0 0 2 2 2 0 KaiC NACHT PF05729.12 gi|15679705|ref|NP_276823.1| - 0.14 12.1 0.2 0.27 11.1 0.2 1.5 1 0 0 1 1 1 0 NACHT domain NTPase_1 PF03266.15 gi|15679705|ref|NP_276823.1| - 0.14 12.0 1.0 7.4 6.5 0.1 2.3 2 0 0 2 2 2 0 NTPase AAA_26 PF13500.6 gi|15679705|ref|NP_276823.1| - 0.36 10.6 2.0 15 5.4 0.1 2.8 2 1 0 2 2 2 0 AAA domain CdhD PF03599.16 gi|15679706|ref|NP_276824.1| - 1.7e-95 320.0 0.2 2.7e-88 296.3 0.0 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CdhD PF03599.16 gi|15679707|ref|NP_276825.1| - 2e-160 533.7 0.0 2.3e-160 533.5 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|15679707|ref|NP_276825.1| - 6.2e-16 57.8 2.1 1.4e-15 56.7 2.1 1.6 1 0 0 1 1 1 1 Putative Fe-S cluster Fer4_6 PF12837.7 gi|15679708|ref|NP_276826.1| - 2.2e-12 46.5 36.7 9.9e-07 28.6 2.3 4.5 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 gi|15679708|ref|NP_276826.1| - 3e-11 42.7 37.1 3.5e-07 29.8 3.0 5.5 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_11 PF13247.6 gi|15679708|ref|NP_276826.1| - 2.4e-10 40.4 14.5 2.4e-10 40.4 14.5 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679708|ref|NP_276826.1| - 3.1e-09 36.8 30.6 8.8e-07 28.9 10.4 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679708|ref|NP_276826.1| - 3.9e-09 36.1 29.6 0.0001 22.2 1.5 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679708|ref|NP_276826.1| - 4.4e-09 36.4 28.8 1.5e-05 25.1 10.6 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679708|ref|NP_276826.1| - 2.1e-08 34.6 29.0 0.0028 18.2 11.2 4.1 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679708|ref|NP_276826.1| - 1.2e-05 26.2 24.2 0.04 14.9 5.4 4.4 4 1 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15679708|ref|NP_276826.1| - 1.9e-05 24.7 28.6 0.035 14.2 12.1 3.6 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679708|ref|NP_276826.1| - 3.5e-05 24.0 28.7 0.018 15.5 1.3 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15679708|ref|NP_276826.1| - 0.00028 21.6 39.1 0.29 12.1 5.0 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain ETF_QO PF05187.13 gi|15679708|ref|NP_276826.1| - 0.19 11.9 3.1 0.22 11.7 1.6 1.9 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_8 PF13183.6 gi|15679708|ref|NP_276826.1| - 2.6 8.5 33.5 0.12 12.9 3.8 4.1 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679708|ref|NP_276826.1| - 3.8 7.7 27.0 0.13 12.5 9.8 3.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679708|ref|NP_276826.1| - 5.7 7.6 29.5 3.8 8.1 1.0 4.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679708|ref|NP_276826.1| - 8.7 7.2 27.9 13 6.6 1.4 4.3 3 1 0 3 3 3 0 4Fe-4S single cluster domain HEAT_2 PF13646.6 gi|15679709|ref|NP_276827.1| - 9.1e-51 170.2 12.5 2.5e-18 66.3 0.4 4.3 3 1 1 4 4 4 4 HEAT repeats HEAT_PBS PF03130.16 gi|15679709|ref|NP_276827.1| - 4.2e-29 98.2 16.5 4.9e-06 26.7 0.5 8.0 8 0 0 8 8 8 5 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|15679709|ref|NP_276827.1| - 1e-23 81.3 6.8 0.0024 18.0 0.0 9.2 9 0 0 9 9 9 6 HEAT repeat HEAT_EZ PF13513.6 gi|15679709|ref|NP_276827.1| - 3e-08 34.0 12.7 0.012 16.1 2.1 7.0 5 2 1 6 6 6 2 HEAT-like repeat Arm PF00514.23 gi|15679709|ref|NP_276827.1| - 1.4e-07 31.3 0.8 0.26 11.4 0.0 4.6 4 1 1 5 5 5 3 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|15679709|ref|NP_276827.1| - 3e-06 27.4 2.4 4.4 7.3 0.1 5.9 3 1 4 7 7 7 2 non-SMC mitotic condensation complex subunit 1 RasGEF_N_2 PF14663.6 gi|15679709|ref|NP_276827.1| - 0.0011 19.3 0.1 9.9 6.6 0.0 3.9 3 1 1 4 4 4 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain Adaptin_N PF01602.20 gi|15679709|ref|NP_276827.1| - 0.0081 14.8 0.0 1.8 7.0 0.0 3.2 1 1 2 3 3 3 1 Adaptin N terminal region TetR_C_16 PF17920.1 gi|15679709|ref|NP_276827.1| - 0.075 13.3 0.7 11 6.3 0.0 3.7 2 2 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain SQHop_cyclase_C PF13243.6 gi|15679710|ref|NP_276828.1| - 0.00069 18.8 0.1 0.036 13.1 0.1 2.6 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 gi|15679710|ref|NP_276828.1| - 0.002 17.8 0.2 0.3 10.8 0.1 2.5 2 0 0 2 2 2 2 Prenyltransferase and squalene oxidase repeat Glyco_hydro_127 PF07944.12 gi|15679710|ref|NP_276828.1| - 0.021 13.3 0.0 0.026 13.0 0.0 1.2 1 0 0 1 1 1 0 Beta-L-arabinofuranosidase, GH127 PMT_2 PF13231.6 gi|15679711|ref|NP_276829.1| - 6.2e-10 39.5 3.6 6.2e-10 39.5 3.6 3.8 4 1 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2079 PF09852.9 gi|15679711|ref|NP_276829.1| - 0.0097 14.8 14.4 0.011 14.6 8.1 2.4 1 1 1 2 2 2 2 Predicted membrane protein (DUF2079) YdjM PF04307.14 gi|15679711|ref|NP_276829.1| - 0.035 13.4 1.6 0.43 9.9 1.6 2.8 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Trp_halogenase PF04820.14 gi|15679712|ref|NP_276830.1| - 6.1e-11 41.8 0.0 6.8e-09 35.1 0.0 2.0 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.7 gi|15679712|ref|NP_276830.1| - 7e-10 38.8 0.4 9.9e-10 38.3 0.4 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|15679712|ref|NP_276830.1| - 6.1e-08 32.3 1.8 0.00044 19.6 0.9 3.0 2 1 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|15679712|ref|NP_276830.1| - 4.7e-07 29.7 0.4 0.00021 21.0 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15679712|ref|NP_276830.1| - 8.5e-07 28.4 1.5 0.00043 19.5 0.4 2.1 1 1 1 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 gi|15679712|ref|NP_276830.1| - 5.4e-06 25.7 0.0 0.019 14.0 0.0 2.0 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|15679712|ref|NP_276830.1| - 4.5e-05 23.6 0.2 0.00014 22.0 0.2 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|15679712|ref|NP_276830.1| - 0.00032 19.9 0.4 0.00054 19.2 0.4 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|15679712|ref|NP_276830.1| - 0.00076 18.3 0.2 0.0011 17.7 0.2 1.2 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|15679712|ref|NP_276830.1| - 0.0045 16.3 0.1 0.0072 15.6 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 gi|15679712|ref|NP_276830.1| - 0.0049 16.1 0.4 0.046 12.9 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|15679712|ref|NP_276830.1| - 0.011 15.0 0.3 0.79 8.9 0.1 2.3 2 0 0 2 2 2 0 Thi4 family Pyr_redox PF00070.27 gi|15679712|ref|NP_276830.1| - 0.071 13.7 0.0 0.2 12.2 0.0 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|15679713|ref|NP_276831.1| - 1.9e-13 49.6 14.2 3.1e-08 33.1 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679713|ref|NP_276831.1| - 7.5e-11 42.5 23.3 2.3e-07 31.3 13.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679713|ref|NP_276831.1| - 1.6e-09 37.7 20.5 3.4e-07 30.3 11.3 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679713|ref|NP_276831.1| - 4.1e-09 36.0 12.0 3.6e-06 26.7 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679713|ref|NP_276831.1| - 5.8e-09 35.6 15.9 9.3e-06 25.5 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679713|ref|NP_276831.1| - 3.9e-08 34.1 11.1 0.00066 20.6 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15679713|ref|NP_276831.1| - 1e-07 31.9 14.9 1.5e-06 28.2 13.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679713|ref|NP_276831.1| - 1.5e-05 25.1 24.8 0.00092 19.3 15.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679713|ref|NP_276831.1| - 4.6e-05 23.8 13.6 0.025 15.0 2.7 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679713|ref|NP_276831.1| - 4.8e-05 23.8 12.1 0.014 15.9 1.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679713|ref|NP_276831.1| - 6.6e-05 23.6 19.7 0.016 16.1 5.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15679713|ref|NP_276831.1| - 0.00019 21.7 19.6 0.0014 19.0 3.5 2.4 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15679713|ref|NP_276831.1| - 0.0065 17.0 13.3 0.036 14.6 0.6 2.4 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|15679713|ref|NP_276831.1| - 0.0081 16.3 12.1 0.025 14.8 1.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679713|ref|NP_276831.1| - 0.015 16.1 10.8 0.18 12.7 0.7 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679713|ref|NP_276831.1| - 0.2 12.4 0.6 0.2 12.4 0.6 2.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain DNA_RNApol_7kD PF03604.13 gi|15679713|ref|NP_276831.1| - 4.4 7.1 14.1 8.5 6.2 1.5 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Metallophos PF00149.28 gi|15679714|ref|NP_276832.1| - 1.6e-18 68.0 3.6 4.3e-18 66.6 3.6 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15679714|ref|NP_276832.1| - 6.7e-14 52.4 2.2 1.4e-13 51.4 2.2 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|15679714|ref|NP_276832.1| - 0.061 12.6 0.0 0.18 11.1 0.0 1.7 1 1 1 2 2 2 0 Metallophosphoesterase, calcineurin superfamily AcrZ PF10766.9 gi|15679715|ref|NP_276833.1| - 0.05 13.2 4.3 0.31 10.7 0.2 2.9 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ DUF872 PF05915.12 gi|15679715|ref|NP_276833.1| - 0.096 12.9 4.0 0.12 12.5 3.0 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) CrgA PF06781.12 gi|15679715|ref|NP_276833.1| - 0.2 11.7 0.2 0.2 11.7 0.2 2.5 3 0 0 3 3 3 0 Cell division protein CrgA CPP1-like PF11833.8 gi|15679715|ref|NP_276833.1| - 1.7 8.2 4.4 2.6 7.7 0.3 2.2 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF202 PF02656.15 gi|15679715|ref|NP_276833.1| - 5 7.7 8.9 7.2 7.1 0.1 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF202) PhoU PF01895.19 gi|15679716|ref|NP_276834.1| - 3.7e-27 94.6 10.5 1e-15 57.9 1.2 2.4 2 0 0 2 2 2 2 PhoU domain HTH_24 PF13412.6 gi|15679716|ref|NP_276834.1| - 7.9e-07 28.5 0.3 1.5e-06 27.6 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|15679716|ref|NP_276834.1| - 1.5e-06 28.1 0.2 4.3e-06 26.6 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|15679716|ref|NP_276834.1| - 1.3e-05 25.0 0.0 2.8e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|15679716|ref|NP_276834.1| - 7.7e-05 22.5 0.3 0.0008 19.3 0.0 2.4 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|15679716|ref|NP_276834.1| - 0.00014 21.7 0.0 0.0004 20.2 0.0 1.8 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|15679716|ref|NP_276834.1| - 0.00034 20.9 0.0 0.00088 19.6 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator Sigma70_r4 PF04545.16 gi|15679716|ref|NP_276834.1| - 0.00093 18.7 0.3 0.0065 16.0 0.0 2.5 3 0 0 3 3 3 1 Sigma-70, region 4 TFIIE_alpha PF02002.17 gi|15679716|ref|NP_276834.1| - 0.0021 17.9 0.4 0.009 15.9 0.2 2.2 2 1 0 2 2 2 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|15679716|ref|NP_276834.1| - 0.012 15.6 1.1 0.019 14.9 0.2 1.9 2 0 0 2 2 2 0 HTH domain HTH_IclR PF09339.10 gi|15679716|ref|NP_276834.1| - 0.021 14.6 0.0 0.066 13.0 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_3 PF01381.22 gi|15679716|ref|NP_276834.1| - 0.026 14.6 0.1 0.06 13.4 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_23 PF13384.6 gi|15679716|ref|NP_276834.1| - 0.028 14.2 0.2 0.1 12.4 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain FaeA PF04703.12 gi|15679716|ref|NP_276834.1| - 0.03 14.7 0.3 0.076 13.4 0.1 1.8 2 0 0 2 2 1 0 FaeA-like protein HTH_Mga PF08280.11 gi|15679716|ref|NP_276834.1| - 0.04 13.9 1.5 2.8 8.1 0.1 3.0 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_19 PF12844.7 gi|15679716|ref|NP_276834.1| - 0.078 13.0 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|15679716|ref|NP_276834.1| - 0.093 12.9 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MCM_N PF14551.6 gi|15679716|ref|NP_276834.1| - 0.63 10.7 3.6 4.5 7.9 3.5 2.4 1 1 0 1 1 1 0 MCM N-terminal domain 2TM PF13239.6 gi|15679717|ref|NP_276835.1| - 3.6e-31 107.3 7.4 4.1e-31 107.1 7.4 1.0 1 0 0 1 1 1 1 2TM domain Citrate_synt PF00285.21 gi|15679718|ref|NP_276836.1| - 1.2e-43 149.6 0.0 4.6e-36 124.6 0.0 2.0 1 1 1 2 2 2 2 Citrate synthase, C-terminal domain PBP_like_2 PF12849.7 gi|15679719|ref|NP_276837.1| - 7.5e-47 160.3 3.3 1.4e-46 159.5 3.3 1.3 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|15679719|ref|NP_276837.1| - 3.7e-24 84.9 0.1 4.8e-24 84.6 0.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|15679719|ref|NP_276837.1| - 2.4e-13 50.4 0.0 3.6e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|15679719|ref|NP_276837.1| - 5.9e-09 36.3 6.6 1e-08 35.5 6.6 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|15679719|ref|NP_276837.1| - 0.0024 17.7 0.8 0.45 10.3 0.0 2.6 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|15679719|ref|NP_276837.1| - 0.0042 16.5 0.0 0.015 14.7 0.0 1.9 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein LysR_substrate PF03466.20 gi|15679719|ref|NP_276837.1| - 0.16 11.3 0.0 0.8 9.0 0.0 2.0 2 1 0 2 2 2 0 LysR substrate binding domain PBP_like_2 PF12849.7 gi|15679720|ref|NP_276838.1| - 2.1e-45 155.6 0.1 3.7e-45 154.8 0.1 1.3 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|15679720|ref|NP_276838.1| - 2.4e-22 79.0 0.0 3e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|15679720|ref|NP_276838.1| - 9.3e-15 55.0 0.0 1.6e-14 54.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|15679720|ref|NP_276838.1| - 4.1e-08 33.5 0.5 1.7e-07 31.5 0.5 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|15679720|ref|NP_276838.1| - 0.00011 22.2 0.1 0.006 16.4 0.0 2.2 1 1 0 2 2 2 1 Bacterial extracellular solute-binding protein LysR_substrate PF03466.20 gi|15679720|ref|NP_276838.1| - 0.001 18.5 0.0 0.0018 17.6 0.0 1.5 1 1 0 1 1 1 1 LysR substrate binding domain SBP_bac_6 PF13343.6 gi|15679720|ref|NP_276838.1| - 0.051 13.0 0.0 0.088 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|15679721|ref|NP_276839.1| - 9.8e-29 100.4 20.3 9.8e-29 100.4 20.3 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component UPF0239 PF06783.11 gi|15679721|ref|NP_276839.1| - 0.057 13.6 0.3 0.057 13.6 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) TMEMspv1-c74-12 PF11044.8 gi|15679721|ref|NP_276839.1| - 2.6 8.1 6.0 16 5.6 6.0 2.4 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein BPD_transp_1 PF00528.22 gi|15679722|ref|NP_276840.1| - 3.3e-28 98.7 15.5 3.3e-28 98.7 15.5 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|15679723|ref|NP_276841.1| - 1.3e-31 110.0 0.0 1.8e-31 109.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15679723|ref|NP_276841.1| - 5.6e-12 46.1 0.0 9.7e-05 22.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15679723|ref|NP_276841.1| - 1e-08 34.9 0.2 5.9e-07 29.2 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15679723|ref|NP_276841.1| - 3.8e-05 23.6 0.0 6.8e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15679723|ref|NP_276841.1| - 0.00011 22.4 0.0 0.00025 21.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|15679723|ref|NP_276841.1| - 0.0002 21.3 0.0 0.00051 20.0 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|15679723|ref|NP_276841.1| - 0.0017 18.1 0.0 0.0031 17.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|15679723|ref|NP_276841.1| - 0.0036 17.2 0.0 0.0067 16.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|15679723|ref|NP_276841.1| - 0.0088 16.4 0.1 0.021 15.2 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|15679723|ref|NP_276841.1| - 0.009 16.5 0.0 0.018 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15679723|ref|NP_276841.1| - 0.0096 16.5 0.0 0.021 15.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|15679723|ref|NP_276841.1| - 0.011 15.3 0.0 0.029 13.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|15679723|ref|NP_276841.1| - 0.017 14.8 0.4 0.041 13.6 0.0 1.8 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|15679723|ref|NP_276841.1| - 0.018 15.2 0.0 0.041 14.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|15679723|ref|NP_276841.1| - 0.018 15.4 0.1 0.056 13.8 0.0 1.8 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 gi|15679723|ref|NP_276841.1| - 0.038 13.2 0.0 0.058 12.6 0.0 1.2 1 1 0 1 1 1 0 NB-ARC domain Adeno_IVa2 PF02456.15 gi|15679723|ref|NP_276841.1| - 0.045 12.6 0.0 0.57 8.9 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA PF00004.29 gi|15679723|ref|NP_276841.1| - 0.062 13.7 0.1 0.75 10.2 0.0 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|15679723|ref|NP_276841.1| - 0.073 12.2 0.0 0.14 11.3 0.0 1.7 1 1 0 1 1 1 0 G-protein alpha subunit AAA_28 PF13521.6 gi|15679723|ref|NP_276841.1| - 0.078 13.2 0.0 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|15679723|ref|NP_276841.1| - 0.082 12.9 0.3 0.25 11.4 0.0 2.0 3 0 0 3 3 2 0 AAA domain AAA_30 PF13604.6 gi|15679723|ref|NP_276841.1| - 0.086 12.5 0.0 0.65 9.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain PPV_E1_C PF00519.17 gi|15679723|ref|NP_276841.1| - 0.088 11.6 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase Viral_helicase1 PF01443.18 gi|15679723|ref|NP_276841.1| - 0.11 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_5 PF07728.14 gi|15679723|ref|NP_276841.1| - 0.13 12.3 0.0 0.36 10.8 0.0 1.7 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_10 PF12846.7 gi|15679723|ref|NP_276841.1| - 0.13 11.1 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain MMR_HSR1 PF01926.23 gi|15679723|ref|NP_276841.1| - 0.15 12.1 0.1 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase PhoU PF01895.19 gi|15679724|ref|NP_276842.1| - 8e-19 67.9 7.1 1.7e-13 50.8 0.8 2.2 2 0 0 2 2 2 2 PhoU domain DUF3638 PF12340.8 gi|15679724|ref|NP_276842.1| - 0.0038 16.6 0.5 0.32 10.3 0.2 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3638) Na_sulph_symp PF00939.19 gi|15679724|ref|NP_276842.1| - 0.052 12.6 0.0 0.064 12.3 0.0 1.1 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region DUF2226 PF09987.9 gi|15679725|ref|NP_276843.1| - 2.5e-11 43.5 5.4 5.6e-07 29.2 0.8 2.0 1 1 1 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2226) GatB_Yqey PF02637.18 gi|15679725|ref|NP_276843.1| - 0.008 16.1 0.8 0.01 15.7 0.8 1.2 1 0 0 1 1 1 1 GatB domain PhoU PF01895.19 gi|15679726|ref|NP_276844.1| - 2e-33 114.7 9.8 8.5e-18 64.6 1.6 2.1 2 0 0 2 2 2 2 PhoU domain Fib_alpha PF08702.10 gi|15679726|ref|NP_276844.1| - 0.48 10.6 4.3 0.55 10.4 2.0 2.0 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Fumerase PF05681.14 gi|15679727|ref|NP_276845.1| - 3.6e-97 325.0 0.1 4.1e-97 324.8 0.1 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Fer4 PF00037.27 gi|15679728|ref|NP_276846.1| - 1.8e-18 65.5 35.8 6.8e-10 38.3 4.3 5.5 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679728|ref|NP_276846.1| - 1.1e-14 53.8 36.4 1.5e-06 28.0 3.0 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679728|ref|NP_276846.1| - 1.8e-13 51.2 24.2 0.00026 21.8 4.2 4.4 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15679728|ref|NP_276846.1| - 3.6e-12 46.2 22.9 6e-06 26.3 8.1 3.3 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679728|ref|NP_276846.1| - 9.2e-12 45.0 37.8 0.0012 19.6 5.3 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679728|ref|NP_276846.1| - 1.6e-11 44.6 29.0 8.5e-08 32.7 9.5 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679728|ref|NP_276846.1| - 4.9e-09 35.8 35.1 1.5e-06 27.9 2.3 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15679728|ref|NP_276846.1| - 5.4e-09 35.9 30.3 8.7e-05 22.7 3.2 4.8 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679728|ref|NP_276846.1| - 4e-08 33.2 30.9 8.2e-06 25.8 9.3 3.2 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679728|ref|NP_276846.1| - 6.8e-06 26.1 32.9 1.1e-05 25.4 10.1 3.7 2 2 1 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679728|ref|NP_276846.1| - 0.00025 21.5 25.9 0.0023 18.4 1.3 4.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679728|ref|NP_276846.1| - 0.00079 19.8 26.4 0.08 13.4 9.2 4.2 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679728|ref|NP_276846.1| - 0.024 15.1 1.7 0.024 15.1 1.7 4.4 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_5 PF12801.7 gi|15679728|ref|NP_276846.1| - 0.13 12.3 1.1 29 4.7 0.0 3.5 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679728|ref|NP_276846.1| - 8.7 7.2 24.3 0.44 11.3 8.7 4.0 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_6 PF12837.7 gi|15679729|ref|NP_276847.1| - 7.2e-15 54.3 36.4 3e-08 33.4 3.0 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4 PF00037.27 gi|15679729|ref|NP_276847.1| - 3.4e-12 45.6 39.8 1.9e-09 37.0 5.0 5.5 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679729|ref|NP_276847.1| - 2.9e-10 39.6 33.7 8.3e-06 25.6 2.8 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679729|ref|NP_276847.1| - 5.5e-10 39.7 31.5 6.2e-05 23.5 2.1 4.2 2 2 3 5 5 5 5 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679729|ref|NP_276847.1| - 1e-08 35.1 35.1 5e-06 26.5 12.2 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679729|ref|NP_276847.1| - 4.1e-08 33.6 38.7 0.00056 20.7 5.8 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15679729|ref|NP_276847.1| - 3e-07 30.5 32.2 0.0022 18.1 11.6 3.8 2 2 3 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679729|ref|NP_276847.1| - 2.4e-06 27.6 32.0 0.00041 20.6 2.2 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679729|ref|NP_276847.1| - 1.1e-05 26.3 29.1 0.014 16.3 4.3 4.3 3 1 1 4 4 4 2 4Fe-4S double cluster binding domain Fer4_11 PF13247.6 gi|15679729|ref|NP_276847.1| - 1.4e-05 25.1 15.8 1.4e-05 25.1 15.8 2.3 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679729|ref|NP_276847.1| - 0.00022 21.3 31.5 0.00082 19.5 4.1 3.4 1 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679729|ref|NP_276847.1| - 0.00067 20.1 8.5 0.019 15.5 1.6 4.4 2 1 4 6 6 6 4 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679729|ref|NP_276847.1| - 0.045 14.3 2.5 0.045 14.3 2.5 3.8 2 2 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15679729|ref|NP_276847.1| - 0.075 13.8 20.4 0.44 11.3 7.0 4.0 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|15679729|ref|NP_276847.1| - 0.17 12.4 33.5 0.36 11.3 10.8 4.3 2 2 0 2 2 1 0 4Fe-4S dicluster domain TPP_enzyme_C PF02775.21 gi|15679730|ref|NP_276848.1| - 1.5e-31 109.3 0.3 3e-31 108.3 0.0 1.6 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|15679730|ref|NP_276848.1| - 0.005 16.1 0.5 0.0094 15.2 0.4 1.5 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase POR_N PF01855.19 gi|15679731|ref|NP_276849.1| - 5.1e-71 239.1 0.1 6.5e-71 238.7 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|15679731|ref|NP_276849.1| - 2.1e-32 111.4 0.1 4.4e-32 110.4 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15679731|ref|NP_276849.1| - 1e-08 35.1 0.2 3.2e-08 33.5 0.1 1.8 2 0 0 2 2 2 1 Transketolase, C-terminal domain POR PF01558.18 gi|15679732|ref|NP_276850.1| - 4.6e-42 144.1 0.4 9.6e-42 143.0 0.4 1.5 1 1 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 gi|15679732|ref|NP_276850.1| - 1.2e-12 47.1 20.3 5.8e-08 32.2 4.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15679732|ref|NP_276850.1| - 2.1e-08 34.6 7.1 0.0012 19.4 1.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679732|ref|NP_276850.1| - 2.5e-08 33.9 14.3 4.6e-08 33.1 14.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15679732|ref|NP_276850.1| - 1.5e-07 31.1 19.4 0.0012 18.8 4.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679732|ref|NP_276850.1| - 2.7e-07 30.3 10.3 0.0011 18.9 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15679732|ref|NP_276850.1| - 2.3e-06 28.5 14.7 0.0013 19.7 3.6 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15679732|ref|NP_276850.1| - 1.2e-05 25.3 15.5 0.00017 21.7 15.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679732|ref|NP_276850.1| - 2.2e-05 24.5 14.1 0.00034 20.7 15.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15679732|ref|NP_276850.1| - 0.0013 19.2 11.5 0.017 15.7 2.7 2.8 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|15679732|ref|NP_276850.1| - 0.0037 17.6 14.6 0.012 16.1 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15679732|ref|NP_276850.1| - 0.018 15.2 4.9 0.032 14.4 4.9 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679732|ref|NP_276850.1| - 0.24 11.9 14.2 0.71 10.4 4.9 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679732|ref|NP_276850.1| - 0.32 11.9 12.7 2.7 8.9 4.0 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679732|ref|NP_276850.1| - 0.71 10.5 14.1 1 10.0 2.7 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679732|ref|NP_276850.1| - 2.2 9.1 19.4 1.8 9.3 4.0 3.7 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|15679732|ref|NP_276850.1| - 5 8.3 19.4 3 9.0 5.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Pterin_bind PF00809.22 gi|15679733|ref|NP_276851.1| - 5.8e-12 45.8 0.0 1.4e-11 44.6 0.0 1.6 2 0 0 2 2 2 1 Pterin binding enzyme DUF4346 PF14251.6 gi|15679733|ref|NP_276851.1| - 1.2e-11 44.6 0.1 2.4e-11 43.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) Polysacc_deac_1 PF01522.21 gi|15679733|ref|NP_276851.1| - 0.0053 16.6 0.0 0.82 9.6 0.0 2.4 2 0 0 2 2 2 2 Polysaccharide deacetylase DUF561 PF04481.12 gi|15679733|ref|NP_276851.1| - 0.16 11.1 0.1 0.38 9.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) ATP_bind_3 PF01171.20 gi|15679734|ref|NP_276852.1| - 3.3e-13 49.8 0.0 4.5e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 PP-loop family zn-ribbon_14 PF16503.5 gi|15679734|ref|NP_276852.1| - 5.8e-07 28.9 0.6 5.8e-07 28.9 0.6 2.1 2 0 0 2 2 2 1 Zinc-ribbon tRNA_Me_trans PF03054.16 gi|15679734|ref|NP_276852.1| - 0.0039 16.0 0.0 0.0064 15.3 0.0 1.4 1 1 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|15679734|ref|NP_276852.1| - 0.047 12.8 0.0 0.072 12.2 0.0 1.3 1 0 0 1 1 1 0 NAD synthase QueC PF06508.13 gi|15679734|ref|NP_276852.1| - 0.09 12.3 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|15679734|ref|NP_276852.1| - 0.14 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase ThiS PF02597.20 gi|15679735|ref|NP_276853.1| - 5.1e-07 30.2 0.6 5.7e-07 30.1 0.6 1.0 1 0 0 1 1 1 1 ThiS family DUF89 PF01937.19 gi|15679736|ref|NP_276854.1| - 5.9e-56 189.9 0.0 6.7e-56 189.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 DUF2064 PF09837.9 gi|15679736|ref|NP_276854.1| - 0.015 15.1 0.2 3.6 7.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2064) Transcrip_reg PF01709.20 gi|15679736|ref|NP_276854.1| - 0.11 11.9 0.1 0.18 11.2 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator Thioredoxin_7 PF13899.6 gi|15679737|ref|NP_276855.1| - 8.3e-19 67.6 0.0 1.1e-18 67.2 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|15679737|ref|NP_276855.1| - 2.6e-17 63.2 0.0 3.6e-17 62.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredox_DsbH PF03190.15 gi|15679737|ref|NP_276855.1| - 1.1e-12 48.2 0.0 1.4e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin PF00085.20 gi|15679737|ref|NP_276855.1| - 2.2e-12 46.8 0.0 2.9e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|15679737|ref|NP_276855.1| - 1.3e-06 28.6 0.1 0.0048 17.2 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Redoxin PF08534.10 gi|15679737|ref|NP_276855.1| - 0.00021 21.0 0.0 0.00028 20.6 0.0 1.2 1 0 0 1 1 1 1 Redoxin DUF953 PF06110.11 gi|15679737|ref|NP_276855.1| - 0.0011 18.6 0.3 0.0036 16.9 0.3 1.8 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 gi|15679737|ref|NP_276855.1| - 0.0022 17.8 0.0 0.0027 17.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.21 gi|15679737|ref|NP_276855.1| - 0.0057 16.6 0.0 0.008 16.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_3 PF13192.6 gi|15679737|ref|NP_276855.1| - 0.011 15.8 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin domain TIR_2 PF13676.6 gi|15679737|ref|NP_276855.1| - 0.02 15.5 0.0 0.028 15.0 0.0 1.1 1 0 0 1 1 1 0 TIR domain Asp5 PF17000.5 gi|15679737|ref|NP_276855.1| - 0.035 14.2 0.0 0.065 13.4 0.0 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec, Asp5 Thioredoxin_9 PF14595.6 gi|15679737|ref|NP_276855.1| - 0.036 13.8 0.2 0.13 12.0 0.2 1.9 1 1 0 1 1 1 0 Thioredoxin Glutaredoxin PF00462.24 gi|15679737|ref|NP_276855.1| - 0.059 13.6 0.1 0.2 11.9 0.1 1.9 1 1 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 gi|15679737|ref|NP_276855.1| - 0.059 13.8 0.0 0.097 13.1 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DsbD PF02683.15 gi|15679738|ref|NP_276856.1| - 3.8e-21 76.0 22.6 2.5e-20 73.3 22.6 2.3 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF1932 PF09130.11 gi|15679739|ref|NP_276857.1| - 1.8e-13 50.2 0.0 5.5e-13 48.7 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1932) F420_oxidored PF03807.17 gi|15679739|ref|NP_276857.1| - 9.9e-08 32.5 0.2 9.2e-07 29.4 0.0 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|15679739|ref|NP_276857.1| - 0.00014 22.1 0.2 0.00027 21.2 0.2 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|15679739|ref|NP_276857.1| - 0.0026 17.4 0.0 0.0052 16.4 0.0 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 gi|15679739|ref|NP_276857.1| - 0.0082 15.5 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PDH PF02153.17 gi|15679739|ref|NP_276857.1| - 0.011 14.8 0.1 0.021 13.9 0.0 1.5 1 1 0 1 1 1 0 Prephenate dehydrogenase HIGH_NTase1_ass PF16581.5 gi|15679741|ref|NP_276859.1| - 1.7e-12 47.8 0.2 3.1e-12 46.9 0.2 1.3 1 0 0 1 1 1 1 Cytidyltransferase-related C-terminal region CTP_transf_like PF01467.26 gi|15679742|ref|NP_276860.1| - 2.6e-07 30.9 0.0 3e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|15679742|ref|NP_276860.1| - 0.0002 21.3 0.0 0.0002 21.3 0.0 1.1 1 0 0 1 1 1 1 FAD synthetase HIGH_NTase1 PF05636.11 gi|15679742|ref|NP_276860.1| - 0.0057 15.9 0.0 0.0057 15.9 0.0 1.0 1 0 0 1 1 1 1 HIGH Nucleotidyl Transferase Radical_SAM PF04055.21 gi|15679743|ref|NP_276861.1| - 0.002 18.5 0.1 0.0036 17.7 0.1 1.4 2 0 0 2 2 2 1 Radical SAM superfamily Radical_SAM_C PF16199.5 gi|15679743|ref|NP_276861.1| - 0.033 14.2 0.0 0.082 12.9 0.0 1.7 1 0 0 1 1 1 0 Radical_SAM C-terminal domain Bac_luciferase PF00296.20 gi|15679744|ref|NP_276862.1| - 4.7e-60 203.6 0.1 5.7e-60 203.4 0.1 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Nitro_FeMo-Co PF02579.17 gi|15679744|ref|NP_276862.1| - 0.024 15.0 0.0 11 6.4 0.0 2.6 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor Glyco_transf_20 PF00982.21 gi|15679745|ref|NP_276863.1| - 4.7e-149 497.1 0.0 5.3e-149 496.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 DUF4065 PF13274.6 gi|15679745|ref|NP_276863.1| - 0.029 15.3 1.1 1.2 10.1 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4065) PGM_PMM_I PF02878.16 gi|15679746|ref|NP_276864.1| - 1.1e-23 83.5 0.0 2.2e-23 82.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|15679746|ref|NP_276864.1| - 7e-14 52.3 0.0 2e-13 50.8 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|15679746|ref|NP_276864.1| - 5e-11 42.8 0.0 8.6e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|15679746|ref|NP_276864.1| - 2.5e-07 30.8 0.1 5.7e-07 29.6 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain NTP_transferase PF00483.23 gi|15679747|ref|NP_276865.1| - 1.7e-50 171.9 0.0 2.1e-50 171.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|15679747|ref|NP_276865.1| - 1.6e-14 52.9 24.9 1.7e-06 27.5 1.2 5.1 2 1 4 7 7 7 6 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|15679747|ref|NP_276865.1| - 5.6e-12 46.3 0.0 7.5e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|15679747|ref|NP_276865.1| - 4.4e-05 22.6 1.5 0.014 14.3 1.2 2.6 2 1 0 2 2 2 2 L-fucokinase Hexapep_2 PF14602.6 gi|15679747|ref|NP_276865.1| - 5.3e-05 22.9 21.2 0.092 12.5 0.5 4.5 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|15679747|ref|NP_276865.1| - 0.00071 17.8 0.5 0.001 17.3 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) IspD PF01128.19 gi|15679747|ref|NP_276865.1| - 0.19 11.4 0.0 0.63 9.7 0.0 1.7 2 0 0 2 2 2 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Trehalose_PPase PF02358.16 gi|15679748|ref|NP_276866.1| - 3.9e-57 193.1 0.0 4.5e-57 192.9 0.0 1.0 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 gi|15679748|ref|NP_276866.1| - 0.013 15.2 0.0 0.025 14.3 0.0 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase MutS_V PF00488.21 gi|15679750|ref|NP_276868.1| - 6.4e-09 36.1 0.9 1.3e-08 35.1 0.9 1.5 1 0 0 1 1 1 1 MutS domain V AAA_14 PF13173.6 gi|15679750|ref|NP_276868.1| - 1e-05 25.6 0.2 5.1e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain HHH_5 PF14520.6 gi|15679750|ref|NP_276868.1| - 2.5e-05 24.8 0.9 9.5e-05 22.9 0.9 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_28 PF13521.6 gi|15679750|ref|NP_276868.1| - 3.1e-05 24.3 0.1 0.00024 21.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 gi|15679750|ref|NP_276868.1| - 0.0094 15.8 0.6 0.038 13.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|15679750|ref|NP_276868.1| - 0.01 16.3 1.4 0.021 15.3 0.3 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|15679750|ref|NP_276868.1| - 0.021 15.2 0.1 0.097 13.1 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 gi|15679750|ref|NP_276868.1| - 0.025 15.1 0.4 0.1 13.1 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|15679750|ref|NP_276868.1| - 0.044 13.5 0.0 0.088 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|15679750|ref|NP_276868.1| - 0.096 12.4 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain CPT PF07931.12 gi|15679750|ref|NP_276868.1| - 0.13 12.1 0.1 1 9.2 0.0 2.3 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein ABC_tran PF00005.27 gi|15679750|ref|NP_276868.1| - 0.27 11.8 0.5 1.3 9.5 0.1 2.3 3 0 0 3 3 3 0 ABC transporter HHH_2 PF12826.7 gi|15679750|ref|NP_276868.1| - 0.31 11.2 1.6 0.71 10.0 0.2 2.3 2 1 0 2 2 1 0 Helix-hairpin-helix motif Peptidase_U32 PF01136.19 gi|15679751|ref|NP_276869.1| - 7.8e-93 309.9 0.0 1e-80 270.2 0.0 3.1 2 1 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|15679751|ref|NP_276869.1| - 4.9e-14 52.9 0.0 8.7e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Collagenase Response_reg PF00072.24 gi|15679752|ref|NP_276870.1| - 1.1e-23 83.5 0.2 2.2e-23 82.5 0.2 1.5 1 0 0 1 1 1 1 Response regulator receiver domain GAF_2 PF13185.6 gi|15679752|ref|NP_276870.1| - 3.5e-22 79.2 0.2 1.6e-20 73.8 0.0 2.7 2 1 0 2 2 2 1 GAF domain GAF PF01590.26 gi|15679752|ref|NP_276870.1| - 1.2e-10 42.1 0.0 3.9e-09 37.2 0.0 2.4 2 1 0 2 2 2 1 GAF domain PAS_4 PF08448.10 gi|15679752|ref|NP_276870.1| - 2.5e-08 34.1 0.0 5.3e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|15679752|ref|NP_276870.1| - 2.9e-07 30.7 0.0 7e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|15679752|ref|NP_276870.1| - 4.8e-07 29.8 0.0 1.1e-06 28.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.6 gi|15679752|ref|NP_276870.1| - 1.4e-05 25.4 0.0 0.00025 21.4 0.0 2.4 2 0 0 2 2 2 1 GAF domain Thymidylate_kin PF02223.17 gi|15679753|ref|NP_276871.1| - 3e-49 167.2 0.0 3.4e-49 167.0 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|15679753|ref|NP_276871.1| - 0.0013 18.6 0.0 0.052 13.4 0.0 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_28 PF13521.6 gi|15679753|ref|NP_276871.1| - 0.0037 17.5 0.0 0.0056 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15679753|ref|NP_276871.1| - 0.033 14.6 0.0 0.1 13.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|15679753|ref|NP_276871.1| - 0.064 12.9 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 gi|15679753|ref|NP_276871.1| - 0.16 12.1 0.0 0.22 11.7 0.0 1.4 1 1 0 1 1 1 0 AAA domain LytR_C PF13399.6 gi|15679753|ref|NP_276871.1| - 0.17 12.9 0.0 0.26 12.3 0.0 1.3 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator CdvA PF18822.1 gi|15679754|ref|NP_276872.1| - 0.028 14.3 0.4 0.17 11.7 0.2 1.8 2 0 0 2 2 2 0 CdvA-like coiled-coil domain RuvB_N PF05496.12 gi|15679754|ref|NP_276872.1| - 0.056 13.2 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Pox_A_type_inc PF04508.12 gi|15679754|ref|NP_276872.1| - 1 9.4 7.4 0.27 11.1 1.8 2.3 1 1 1 2 2 2 0 Viral A-type inclusion protein repeat tRNA-synt_1b PF00579.25 gi|15679755|ref|NP_276873.1| - 7e-52 176.6 0.0 8e-52 176.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|15679755|ref|NP_276873.1| - 1.8e-06 27.1 0.1 0.013 14.4 0.0 2.9 2 1 1 3 3 3 2 tRNA synthetases class I (K) NMD3 PF04981.13 gi|15679756|ref|NP_276874.1| - 3.6e-56 190.3 0.2 5.1e-56 189.9 0.2 1.2 1 0 0 1 1 1 1 NMD3 family Rpr2 PF04032.16 gi|15679756|ref|NP_276874.1| - 0.1 12.9 0.1 3.3 8.1 0.0 2.6 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF3964 PF13107.6 gi|15679756|ref|NP_276874.1| - 0.13 12.6 0.0 0.46 10.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3964) zf-C4pol PF14260.6 gi|15679756|ref|NP_276874.1| - 0.61 10.6 5.6 13 6.3 0.1 3.0 2 1 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta DZR PF12773.7 gi|15679756|ref|NP_276874.1| - 4.9 7.3 7.3 35 4.5 0.9 2.9 1 1 0 2 2 2 0 Double zinc ribbon eIF-5_eIF-2B PF01873.17 gi|15679757|ref|NP_276875.1| - 1.1e-37 128.5 0.0 1.3e-37 128.2 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Vps36-NZF-N PF16988.5 gi|15679757|ref|NP_276875.1| - 0.13 11.7 0.4 0.2 11.0 0.4 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RanBP PF00641.18 gi|15679757|ref|NP_276875.1| - 0.38 10.1 0.1 0.38 10.1 0.1 1.9 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others MCM PF00493.23 gi|15679758|ref|NP_276876.1| - 4.2e-102 340.0 0.0 6.3e-102 339.4 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|15679758|ref|NP_276876.1| - 2.7e-34 117.7 0.1 4.8e-34 116.9 0.1 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|15679758|ref|NP_276876.1| - 9.5e-30 102.9 4.6 9.6e-30 102.9 1.8 2.3 2 0 0 2 2 2 1 MCM AAA-lid domain Mg_chelatase PF01078.21 gi|15679758|ref|NP_276876.1| - 1.9e-07 30.7 0.1 0.00029 20.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM_N PF14551.6 gi|15679758|ref|NP_276876.1| - 9.1e-07 29.4 3.7 1e-06 29.2 0.5 2.7 3 0 0 3 3 2 1 MCM N-terminal domain AAA_5 PF07728.14 gi|15679758|ref|NP_276876.1| - 0.00096 19.2 0.0 0.004 17.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|15679758|ref|NP_276876.1| - 0.0028 18.1 0.6 0.016 15.6 0.6 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_3 PF07726.11 gi|15679758|ref|NP_276876.1| - 0.0033 17.3 0.0 0.035 14.0 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|15679758|ref|NP_276876.1| - 0.0054 17.3 0.5 0.47 11.0 0.0 2.9 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|15679758|ref|NP_276876.1| - 0.008 15.9 0.0 2.4 7.8 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain tRNA_anti-codon PF01336.25 gi|15679758|ref|NP_276876.1| - 0.013 15.5 0.4 0.036 14.0 0.0 1.9 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain AAA_22 PF13401.6 gi|15679758|ref|NP_276876.1| - 0.027 14.8 0.4 0.54 10.5 0.0 3.0 2 1 0 3 3 3 0 AAA domain AAA PF00004.29 gi|15679758|ref|NP_276876.1| - 0.045 14.2 0.0 0.19 12.1 0.0 2.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HypA PF01155.19 gi|15679758|ref|NP_276876.1| - 0.063 13.3 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Vps51 PF08700.11 gi|15679758|ref|NP_276876.1| - 0.091 12.9 0.0 0.44 10.7 0.0 2.2 1 0 0 1 1 1 0 Vps51/Vps67 UPF0242 PF06785.11 gi|15679760|ref|NP_276878.1| - 0.021 14.9 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SLATT_5 PF18160.1 gi|15679760|ref|NP_276878.1| - 0.022 14.1 0.8 0.026 13.9 0.8 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 HALZ PF02183.18 gi|15679760|ref|NP_276878.1| - 0.027 14.7 2.1 0.098 12.9 2.1 2.1 1 1 0 1 1 1 0 Homeobox associated leucine zipper SPATA1_C PF15743.5 gi|15679760|ref|NP_276878.1| - 0.035 14.2 1.9 0.047 13.8 1.9 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Bap31_Bap29_C PF18035.1 gi|15679760|ref|NP_276878.1| - 0.9 9.6 5.1 0.55 10.3 2.3 2.0 1 1 1 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain FtsJ PF01728.19 gi|15679761|ref|NP_276879.1| - 2.8e-56 190.4 0.0 3.2e-56 190.2 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 gi|15679761|ref|NP_276879.1| - 8.9e-06 25.6 0.0 8.7e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|15679761|ref|NP_276879.1| - 0.0072 15.5 0.0 0.0098 15.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_23 PF13489.6 gi|15679761|ref|NP_276879.1| - 0.0075 16.1 0.0 0.012 15.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|15679761|ref|NP_276879.1| - 0.014 15.0 0.0 0.021 14.5 0.0 1.4 1 1 0 1 1 1 0 16S rRNA methyltransferase RsmB/F PCMT PF01135.19 gi|15679761|ref|NP_276879.1| - 0.033 14.0 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|15679761|ref|NP_276879.1| - 0.071 13.8 0.1 0.33 11.7 0.1 2.2 1 1 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15679761|ref|NP_276879.1| - 0.093 12.0 0.0 2.2 7.5 0.0 2.1 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Metallophos_2 PF12850.7 gi|15679762|ref|NP_276880.1| - 1.6e-32 113.0 0.0 1.8e-32 112.8 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|15679762|ref|NP_276880.1| - 5e-05 23.9 0.4 0.046 14.2 0.1 2.2 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase DPRP PF04244.13 gi|15679764|ref|NP_276882.1| - 1.3e-45 156.0 0.0 1.8e-45 155.6 0.0 1.2 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein FAD_binding_7 PF03441.14 gi|15679764|ref|NP_276882.1| - 9.4e-05 22.0 0.1 0.00015 21.3 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DUF3787 PF12655.7 gi|15679764|ref|NP_276882.1| - 0.11 12.4 0.5 0.22 11.5 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3787) BRI3BP PF14965.6 gi|15679766|ref|NP_276884.1| - 1.5e-05 24.6 0.0 1.7e-05 24.4 0.0 1.0 1 0 0 1 1 1 1 Negative regulator of p53/TP53 Ion_trans_2 PF07885.16 gi|15679766|ref|NP_276884.1| - 0.0011 18.8 1.2 0.0013 18.6 1.2 1.1 1 0 0 1 1 1 1 Ion channel HalX PF08663.10 gi|15679766|ref|NP_276884.1| - 0.044 14.1 0.5 0.054 13.8 0.5 1.1 1 0 0 1 1 1 0 HalX domain LapA_dom PF06305.11 gi|15679766|ref|NP_276884.1| - 0.064 13.1 0.5 0.11 12.3 0.5 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Ion_trans PF00520.31 gi|15679767|ref|NP_276885.1| - 0.00019 20.7 12.8 0.00025 20.4 12.8 1.1 1 0 0 1 1 1 1 Ion transport protein Band_7 PF01145.25 gi|15679768|ref|NP_276886.1| - 3e-35 121.8 5.4 4.6e-35 121.2 5.4 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|15679768|ref|NP_276886.1| - 1.7e-05 24.6 0.2 0.00025 20.8 0.1 2.3 1 1 1 2 2 2 1 SPFH domain-Band 7 family Yip1 PF04893.17 gi|15679769|ref|NP_276887.1| - 2.7e-17 63.0 28.0 3.3e-17 62.7 28.0 1.1 1 0 0 1 1 1 1 Yip1 domain Sad1_UNC PF07738.13 gi|15679770|ref|NP_276888.1| - 0.088 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal BclA_C PF18573.1 gi|15679771|ref|NP_276889.1| - 0.022 14.7 1.0 0.038 13.9 0.9 1.6 1 1 0 1 1 1 0 BclA C-terminal domain Radical_SAM PF04055.21 gi|15679772|ref|NP_276890.1| - 8.6e-26 91.3 0.3 2.7e-24 86.4 0.1 2.4 2 1 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|15679772|ref|NP_276890.1| - 2.2e-24 85.8 0.1 1.5e-23 83.1 0.0 2.3 2 1 0 2 2 2 1 B12 binding domain Radical_SAM PF04055.21 gi|15679773|ref|NP_276891.1| - 7.8e-18 65.4 0.0 3.5e-17 63.3 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|15679773|ref|NP_276891.1| - 1.4e-10 41.5 0.7 3.8e-10 40.1 0.7 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|15679773|ref|NP_276891.1| - 7.6e-06 26.2 0.0 1.4e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain TM2 PF05154.16 gi|15679773|ref|NP_276891.1| - 0.06 13.7 0.6 0.28 11.5 0.1 2.0 2 0 0 2 2 2 0 TM2 domain TetR_N PF00440.23 gi|15679775|ref|NP_276893.1| - 2.9e-16 59.0 3.1 4e-16 58.5 0.2 2.5 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family LacI PF00356.21 gi|15679775|ref|NP_276893.1| - 0.00037 20.2 0.3 0.024 14.4 0.1 2.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family TetR_C_7 PF14246.6 gi|15679775|ref|NP_276893.1| - 0.0023 17.9 0.0 0.0074 16.3 0.0 1.9 2 1 0 2 2 2 1 AefR-like transcriptional repressor, C-terminal domain TetR_C_24 PF17932.1 gi|15679775|ref|NP_276893.1| - 0.0054 17.0 0.0 0.011 16.0 0.0 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HAD_2 PF13419.6 gi|15679775|ref|NP_276893.1| - 0.035 14.2 0.0 0.053 13.6 0.0 1.3 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Sigma70_r4_2 PF08281.12 gi|15679775|ref|NP_276893.1| - 0.063 13.0 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 AAA_assoc PF14363.6 gi|15679775|ref|NP_276893.1| - 0.11 12.9 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA Metal_resist PF13801.6 gi|15679776|ref|NP_276894.1| - 0.046 13.9 0.1 0.058 13.6 0.1 1.1 1 0 0 1 1 1 0 Heavy-metal resistance DUF1456 PF07308.13 gi|15679776|ref|NP_276894.1| - 0.077 13.3 0.3 0.37 11.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) GDP_Man_Dehyd PF16363.5 gi|15679777|ref|NP_276895.1| - 5.2e-101 338.4 0.0 6e-101 338.2 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|15679777|ref|NP_276895.1| - 2.1e-74 250.0 0.0 2.5e-74 249.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|15679777|ref|NP_276895.1| - 1.8e-19 69.9 0.0 2.5e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|15679777|ref|NP_276895.1| - 2.5e-19 69.5 0.0 7.1e-19 68.0 0.0 1.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|15679777|ref|NP_276895.1| - 5.8e-19 68.3 0.0 7e-19 68.0 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|15679777|ref|NP_276895.1| - 1.5e-15 57.1 0.0 9.4e-12 44.6 0.0 2.6 2 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|15679777|ref|NP_276895.1| - 7.8e-12 45.5 0.0 2.2e-11 44.0 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 gi|15679777|ref|NP_276895.1| - 0.00019 21.1 0.0 0.00027 20.6 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|15679777|ref|NP_276895.1| - 0.06 12.8 0.0 10 5.5 0.0 2.2 2 0 0 2 2 2 0 short chain dehydrogenase KR PF08659.10 gi|15679777|ref|NP_276895.1| - 0.07 13.0 0.0 0.22 11.4 0.0 1.8 1 1 0 1 1 1 0 KR domain Sacchrp_dh_NADP PF03435.18 gi|15679777|ref|NP_276895.1| - 0.15 12.4 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain dTDP_sugar_isom PF00908.17 gi|15679778|ref|NP_276896.1| - 6.3e-74 247.2 0.0 7.1e-74 247.1 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase NTP_transferase PF00483.23 gi|15679779|ref|NP_276897.1| - 4e-70 236.2 0.0 4.9e-70 235.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15679779|ref|NP_276897.1| - 2.3e-10 41.0 0.0 2.9e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2555 PF10742.9 gi|15679779|ref|NP_276897.1| - 0.016 15.0 0.1 0.21 11.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) CTP_transf_3 PF02348.19 gi|15679779|ref|NP_276897.1| - 0.032 14.1 0.0 0.05 13.5 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase RmlD_sub_bind PF04321.17 gi|15679780|ref|NP_276898.1| - 4.1e-105 351.0 0.0 4.6e-105 350.8 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|15679780|ref|NP_276898.1| - 3.5e-21 75.8 0.0 4.9e-21 75.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15679780|ref|NP_276898.1| - 1.3e-14 54.3 0.0 1.6e-12 47.5 0.0 2.4 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|15679780|ref|NP_276898.1| - 8.3e-14 51.4 0.6 6.8e-12 45.1 0.0 2.8 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|15679780|ref|NP_276898.1| - 1.4e-11 44.1 0.1 5.7e-09 35.5 0.0 2.5 1 1 0 2 2 2 2 Male sterility protein 3Beta_HSD PF01073.19 gi|15679780|ref|NP_276898.1| - 5.7e-11 41.9 0.2 3.3e-09 36.2 0.0 2.4 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family HAD_2 PF13419.6 gi|15679781|ref|NP_276899.1| - 1.1e-19 71.2 0.0 1.5e-19 70.8 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15679781|ref|NP_276899.1| - 1.4e-13 51.7 0.3 2.4e-13 50.9 0.3 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15679781|ref|NP_276899.1| - 3.8e-11 43.7 0.0 1e-09 39.0 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15679781|ref|NP_276899.1| - 6.2e-09 35.8 0.4 1.2e-08 34.8 0.4 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Glyco_hydro_65C PF03633.15 gi|15679782|ref|NP_276900.1| - 0.092 12.7 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain HTH_5 PF01022.20 gi|15679783|ref|NP_276901.1| - 1.1e-19 70.0 1.0 1.9e-19 69.2 0.5 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15679783|ref|NP_276901.1| - 2.8e-13 49.7 0.1 4.2e-13 49.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|15679783|ref|NP_276901.1| - 0.00038 20.3 0.1 0.00059 19.7 0.1 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|15679783|ref|NP_276901.1| - 0.0015 18.6 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.6 gi|15679783|ref|NP_276901.1| - 0.0023 18.1 0.1 0.0035 17.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|15679783|ref|NP_276901.1| - 0.004 17.1 0.1 0.0087 16.0 0.0 1.6 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|15679783|ref|NP_276901.1| - 0.016 15.1 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15679783|ref|NP_276901.1| - 0.029 14.3 0.0 0.046 13.7 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_1 PF00126.27 gi|15679783|ref|NP_276901.1| - 0.036 14.0 0.1 0.061 13.3 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 gi|15679783|ref|NP_276901.1| - 0.11 12.1 0.1 0.26 10.9 0.1 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding DpnI_C PF17726.1 gi|15679783|ref|NP_276901.1| - 0.15 12.2 0.1 3 8.1 0.0 2.2 1 1 1 2 2 2 0 Dam-replacing HTH domain Cyclase PF04199.13 gi|15679784|ref|NP_276902.1| - 2.5e-16 60.2 0.0 3.3e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase TrmO PF01980.16 gi|15679785|ref|NP_276903.1| - 3.7e-32 111.1 0.0 4.4e-32 110.8 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O Flavodoxin_5 PF12724.7 gi|15679787|ref|NP_276905.1| - 3.5e-09 37.1 0.0 8.4e-05 22.8 0.1 2.0 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|15679787|ref|NP_276905.1| - 7.2e-06 25.8 0.0 1.2e-05 25.1 0.0 1.4 1 1 1 2 2 2 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|15679787|ref|NP_276905.1| - 0.00021 21.5 0.0 0.001 19.3 0.0 1.9 1 1 0 2 2 2 1 Flavodoxin FMN_red PF03358.15 gi|15679787|ref|NP_276905.1| - 0.0034 17.1 0.0 0.0038 17.0 0.0 1.0 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_4 PF12682.7 gi|15679787|ref|NP_276905.1| - 0.011 15.5 0.0 0.047 13.4 0.0 1.9 1 1 0 1 1 1 0 Flavodoxin Methyltransf_11 PF08241.12 gi|15679789|ref|NP_276907.1| - 5.2e-06 27.0 0.0 1.8e-05 25.3 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15679789|ref|NP_276907.1| - 1.9e-05 25.2 0.1 7.2e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain DEAD_assoc PF08494.11 gi|15679790|ref|NP_276908.1| - 2.3e-56 190.6 0.0 3.9e-56 189.9 0.0 1.4 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|15679790|ref|NP_276908.1| - 2.8e-29 102.1 0.0 7.8e-29 100.7 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15679790|ref|NP_276908.1| - 1e-16 61.3 0.0 3.3e-16 59.6 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15679790|ref|NP_276908.1| - 2e-09 37.7 0.0 5.6e-09 36.2 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF1424 PF07232.11 gi|15679790|ref|NP_276908.1| - 0.019 14.0 0.0 0.041 12.9 0.0 1.5 1 0 0 1 1 1 0 Putative rep protein (DUF1424) T2SSE PF00437.20 gi|15679790|ref|NP_276908.1| - 0.02 14.0 0.0 0.067 12.2 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein Ubiq_cyt_C_chap PF03981.12 gi|15679790|ref|NP_276908.1| - 0.097 12.7 0.1 0.22 11.6 0.1 1.7 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone Metallophos PF00149.28 gi|15679791|ref|NP_276909.1| - 2.6e-07 31.3 0.8 1e-06 29.4 0.1 1.9 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15679791|ref|NP_276909.1| - 0.0016 18.7 0.1 0.0024 18.1 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain UbiA PF01040.18 gi|15679792|ref|NP_276910.1| - 5.7e-11 42.2 0.2 6.4e-11 42.0 0.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family UbiA PF01040.18 gi|15679793|ref|NP_276911.1| - 0.00035 20.0 0.0 0.00042 19.7 0.0 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family HEAT_2 PF13646.6 gi|15679794|ref|NP_276912.1| - 2.1e-40 137.0 4.6 4.9e-19 68.5 0.4 2.7 1 1 2 3 3 3 3 HEAT repeats HEAT_PBS PF03130.16 gi|15679794|ref|NP_276912.1| - 3e-25 86.3 0.5 1.4e-06 28.4 0.2 5.2 5 0 0 5 5 5 4 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|15679794|ref|NP_276912.1| - 2.8e-16 58.2 0.0 6.9e-05 22.8 0.0 4.3 4 0 0 4 4 4 3 HEAT repeat HEAT_EZ PF13513.6 gi|15679794|ref|NP_276912.1| - 0.0012 19.3 0.5 0.12 12.9 0.4 3.3 3 1 1 4 4 4 1 HEAT-like repeat Vac14_Fab1_bd PF12755.7 gi|15679794|ref|NP_276912.1| - 0.015 15.9 0.0 3 8.5 0.0 3.4 1 1 3 4 4 4 0 Vacuolar 14 Fab1-binding region DUF5071 PF16804.5 gi|15679794|ref|NP_276912.1| - 0.025 14.8 0.0 0.13 12.5 0.0 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF5071) IFRD PF05004.13 gi|15679794|ref|NP_276912.1| - 0.057 12.5 0.7 0.77 8.8 0.4 2.4 1 1 1 2 2 2 0 Interferon-related developmental regulator (IFRD) DUF5397 PF17375.2 gi|15679794|ref|NP_276912.1| - 0.063 13.0 0.0 1.1 9.1 0.0 2.6 2 1 0 2 2 2 0 Family of unknown function (DUF5397) API5 PF05918.11 gi|15679794|ref|NP_276912.1| - 0.065 12.0 0.0 13 4.5 0.0 2.9 2 1 1 3 3 3 0 Apoptosis inhibitory protein 5 (API5) Cnd1 PF12717.7 gi|15679794|ref|NP_276912.1| - 0.09 12.8 0.0 17 5.4 0.0 3.0 1 1 2 3 3 3 0 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 gi|15679794|ref|NP_276912.1| - 0.19 11.8 0.0 5.9 7.1 0.0 2.8 2 1 1 3 3 3 0 Armadillo/beta-catenin-like repeat Amino_oxidase PF01593.24 gi|15679795|ref|NP_276913.1| - 6.8e-48 164.1 0.0 7.7e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|15679795|ref|NP_276913.1| - 2.8e-16 59.5 0.0 6.7e-16 58.3 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|15679795|ref|NP_276913.1| - 1.7e-14 54.2 0.1 2.1e-13 50.6 0.1 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15679795|ref|NP_276913.1| - 1.6e-09 37.4 0.9 1.5e-08 34.2 0.9 2.1 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|15679795|ref|NP_276913.1| - 2.2e-08 33.7 1.4 2.2e-06 27.1 0.5 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|15679795|ref|NP_276913.1| - 2.2e-06 27.1 0.0 3.7e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|15679795|ref|NP_276913.1| - 3.5e-06 26.6 0.0 6.8e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|15679795|ref|NP_276913.1| - 3.7e-06 27.4 2.8 0.00019 22.0 0.7 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15679795|ref|NP_276913.1| - 4.7e-05 22.8 1.1 0.0001 21.7 1.1 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|15679795|ref|NP_276913.1| - 0.00013 20.8 0.9 0.0011 17.8 1.0 2.1 2 0 0 2 2 2 1 HI0933-like protein UDPG_MGDP_dh_N PF03721.14 gi|15679795|ref|NP_276913.1| - 0.00021 20.9 0.1 0.0032 17.1 0.1 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_3 PF13738.6 gi|15679795|ref|NP_276913.1| - 0.00035 19.9 3.0 0.017 14.4 1.3 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15679795|ref|NP_276913.1| - 0.0036 16.5 1.3 0.0082 15.3 1.2 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|15679795|ref|NP_276913.1| - 0.011 15.8 0.4 0.011 15.8 0.4 2.4 3 0 0 3 3 3 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|15679795|ref|NP_276913.1| - 0.013 15.4 0.4 0.026 14.4 0.4 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|15679795|ref|NP_276913.1| - 0.028 13.3 0.9 0.04 12.8 0.9 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|15679795|ref|NP_276913.1| - 0.062 12.3 0.8 0.11 11.5 0.3 1.6 2 0 0 2 2 2 0 Lycopene cyclase protein TrkA_N PF02254.18 gi|15679795|ref|NP_276913.1| - 0.078 13.2 0.6 0.38 11.0 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|15679795|ref|NP_276913.1| - 0.1 11.8 0.5 0.18 11.1 0.5 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain SQS_PSY PF00494.19 gi|15679796|ref|NP_276914.1| - 2.4e-50 171.5 0.1 2.8e-50 171.3 0.1 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase UbiA PF01040.18 gi|15679797|ref|NP_276915.1| - 6.1e-26 91.2 14.4 8.5e-26 90.8 14.4 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family Caroten_synth PF04240.12 gi|15679798|ref|NP_276916.1| - 9.4e-50 169.4 19.4 9.4e-50 169.4 19.4 1.3 2 0 0 2 2 2 1 Carotenoid biosynthesis protein DUF2518 PF10726.9 gi|15679798|ref|NP_276916.1| - 0.018 14.7 6.6 0.071 12.8 0.3 2.6 2 1 1 3 3 3 0 Protein of function (DUF2518) CN_hydrolase PF00795.22 gi|15679799|ref|NP_276917.1| - 8.6e-72 241.6 0.0 9.7e-72 241.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Mntp PF02659.15 gi|15679800|ref|NP_276918.1| - 8e-48 162.0 12.4 8e-48 162.0 12.4 2.0 1 1 1 2 2 2 2 Putative manganese efflux pump Trypsin_2 PF13365.6 gi|15679801|ref|NP_276919.1| - 3.3e-29 102.7 0.9 4.9e-29 102.1 0.9 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|15679801|ref|NP_276919.1| - 1.6e-09 38.0 0.0 3.3e-09 36.9 0.0 1.6 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|15679801|ref|NP_276919.1| - 2.5e-08 34.0 0.0 4.2e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 gi|15679801|ref|NP_276919.1| - 3.9e-07 29.8 0.2 9.2e-07 28.6 0.2 1.6 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|15679801|ref|NP_276919.1| - 5.9e-05 23.3 0.1 0.00013 22.2 0.1 1.6 1 0 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 gi|15679801|ref|NP_276919.1| - 0.013 15.5 0.0 0.033 14.1 0.0 1.8 1 0 0 1 1 1 0 Tricorn protease PDZ domain AAA_5 PF07728.14 gi|15679802|ref|NP_276920.1| - 8e-19 68.0 0.0 1.5e-18 67.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|15679802|ref|NP_276920.1| - 1.9e-13 50.4 0.0 8.7e-06 25.6 0.0 2.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|15679802|ref|NP_276920.1| - 9.5e-13 48.7 0.4 6.9e-12 45.9 0.4 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|15679802|ref|NP_276920.1| - 5.8e-08 33.3 0.3 2.8e-07 31.1 0.3 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_2 PF07724.14 gi|15679802|ref|NP_276920.1| - 1.7e-07 31.5 0.0 4.3e-07 30.2 0.0 1.7 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|15679802|ref|NP_276920.1| - 1.1e-05 25.7 0.3 4.6e-05 23.7 0.1 2.1 2 1 0 2 2 1 1 AAA domain AAA_19 PF13245.6 gi|15679802|ref|NP_276920.1| - 9.8e-05 22.7 0.1 0.00045 20.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|15679802|ref|NP_276920.1| - 0.00013 21.7 0.2 0.0012 18.6 0.2 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|15679802|ref|NP_276920.1| - 0.00015 21.5 0.1 0.16 11.7 0.0 2.7 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_6 PF12774.7 gi|15679802|ref|NP_276920.1| - 0.00071 18.6 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_14 PF13173.6 gi|15679802|ref|NP_276920.1| - 0.001 19.1 0.2 0.0069 16.4 0.2 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|15679802|ref|NP_276920.1| - 0.0023 18.1 0.0 0.0055 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|15679802|ref|NP_276920.1| - 0.0023 17.9 0.4 0.054 13.4 0.0 2.6 2 1 1 3 3 3 1 NACHT domain AAA_30 PF13604.6 gi|15679802|ref|NP_276920.1| - 0.0032 17.2 0.1 0.026 14.2 0.1 2.0 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|15679802|ref|NP_276920.1| - 0.0033 16.8 0.1 0.041 13.3 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|15679802|ref|NP_276920.1| - 0.0033 16.9 0.0 0.0052 16.3 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_18 PF13238.6 gi|15679802|ref|NP_276920.1| - 0.0033 18.0 0.0 0.012 16.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|15679802|ref|NP_276920.1| - 0.0044 16.3 0.0 0.05 12.8 0.0 2.1 2 0 0 2 2 2 1 TIP49 P-loop domain MCM PF00493.23 gi|15679802|ref|NP_276920.1| - 0.011 14.9 0.0 0.089 11.9 0.0 2.1 2 0 0 2 2 2 0 MCM P-loop domain ATPase PF06745.13 gi|15679802|ref|NP_276920.1| - 0.014 14.7 0.6 0.25 10.7 0.0 2.4 2 0 0 2 2 2 0 KaiC NTPase_1 PF03266.15 gi|15679802|ref|NP_276920.1| - 0.017 15.0 0.1 0.22 11.4 0.0 2.2 2 0 0 2 2 2 0 NTPase DUF2075 PF09848.9 gi|15679802|ref|NP_276920.1| - 0.017 14.4 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|15679802|ref|NP_276920.1| - 0.029 14.5 0.1 1.3 9.2 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain NB-ARC PF00931.22 gi|15679802|ref|NP_276920.1| - 0.042 13.0 0.0 0.059 12.5 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain TsaE PF02367.17 gi|15679802|ref|NP_276920.1| - 0.051 13.6 0.0 0.091 12.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|15679802|ref|NP_276920.1| - 0.084 12.6 0.1 0.15 11.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|15679802|ref|NP_276920.1| - 0.1 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15679802|ref|NP_276920.1| - 0.12 12.8 0.0 0.25 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase PhoH PF02562.16 gi|15679802|ref|NP_276920.1| - 0.15 11.5 0.0 0.29 10.6 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein VWA_CoxE PF05762.14 gi|15679803|ref|NP_276921.1| - 3.7e-71 239.1 0.4 5e-71 238.6 0.4 1.1 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein NucS PF01939.16 gi|15679804|ref|NP_276922.1| - 6.9e-115 382.2 0.1 8.4e-115 381.9 0.1 1.0 1 0 0 1 1 1 1 Endonuclease NucS UPF0102 PF02021.17 gi|15679804|ref|NP_276922.1| - 0.0019 18.4 0.0 0.0049 17.1 0.0 1.7 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 HSDR_N PF04313.14 gi|15679804|ref|NP_276922.1| - 0.055 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) PDDEXK_1 PF12705.7 gi|15679804|ref|NP_276922.1| - 0.071 13.0 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF3343 PF11823.8 gi|15679804|ref|NP_276922.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Peptidase_M48 PF01435.18 gi|15679805|ref|NP_276923.1| - 9.2e-21 74.5 0.0 2.7e-20 73.0 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M48 SP_C-Propep PF08999.10 gi|15679805|ref|NP_276923.1| - 0.36 10.6 3.2 2.1 8.2 0.3 2.4 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide Fer4_15 PF13459.6 gi|15679807|ref|NP_276925.1| - 8.6e-15 55.2 2.9 9.7e-15 55.1 2.9 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15679807|ref|NP_276925.1| - 6.4e-11 42.6 3.7 8.6e-11 42.2 3.7 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4 PF00037.27 gi|15679807|ref|NP_276925.1| - 2.6e-05 23.9 1.6 2.6e-05 23.9 1.6 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679807|ref|NP_276925.1| - 0.0001 22.2 1.6 0.0001 22.2 1.6 2.0 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679807|ref|NP_276925.1| - 0.00042 20.3 1.8 0.00042 20.3 1.8 2.1 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679807|ref|NP_276925.1| - 0.00045 20.3 5.6 0.00092 19.3 5.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679807|ref|NP_276925.1| - 0.0013 19.0 0.6 0.0013 19.0 0.6 2.1 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15679807|ref|NP_276925.1| - 0.0071 16.8 3.8 0.019 15.4 4.0 1.6 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679807|ref|NP_276925.1| - 0.0075 16.8 2.3 0.0075 16.8 2.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|15679807|ref|NP_276925.1| - 0.019 15.0 1.0 0.03 14.4 1.0 1.5 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_21 PF14697.6 gi|15679807|ref|NP_276925.1| - 0.02 15.0 10.0 0.061 13.5 10.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679807|ref|NP_276925.1| - 0.022 14.9 2.5 0.022 14.9 2.5 1.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15679807|ref|NP_276925.1| - 0.037 14.9 0.4 0.037 14.9 0.4 1.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679807|ref|NP_276925.1| - 0.045 14.0 1.8 0.045 14.0 1.8 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679807|ref|NP_276925.1| - 0.69 10.9 8.7 6.1 7.9 9.4 2.1 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Abhydrolase_1 PF00561.20 gi|15679808|ref|NP_276926.1| - 1.4e-20 74.0 0.0 2.4e-20 73.3 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|15679808|ref|NP_276926.1| - 1.2e-06 29.3 0.0 1.6e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 gi|15679808|ref|NP_276926.1| - 5.6e-05 22.9 0.0 9.2e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase DUF915 PF06028.11 gi|15679808|ref|NP_276926.1| - 0.003 16.9 0.0 0.57 9.5 0.0 2.1 2 0 0 2 2 2 2 Alpha/beta hydrolase of unknown function (DUF915) Hydrolase_4 PF12146.8 gi|15679808|ref|NP_276926.1| - 0.0032 16.8 0.0 0.0051 16.1 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Nuc_recep-AF1 PF11825.8 gi|15679808|ref|NP_276926.1| - 0.024 14.7 0.2 0.28 11.3 0.1 2.2 2 0 0 2 2 2 0 Nuclear/hormone receptor activator site AF-1 Peptidase_S9 PF00326.21 gi|15679808|ref|NP_276926.1| - 0.069 12.6 0.0 0.2 11.1 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family E3_UbLigase_R4 PF13764.6 gi|15679809|ref|NP_276927.1| - 0.0067 14.7 0.2 0.0077 14.5 0.2 1.1 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 HIT PF01230.23 gi|15679811|ref|NP_276929.1| - 0.00018 22.1 0.0 0.00027 21.6 0.0 1.2 1 0 0 1 1 1 1 HIT domain PMBR PF09373.10 gi|15679811|ref|NP_276929.1| - 0.19 12.0 0.2 0.64 10.3 0.0 2.0 2 0 0 2 2 2 0 Pseudomurein-binding repeat Ferritin PF00210.24 gi|15679812|ref|NP_276930.1| - 1.4e-11 44.5 1.1 1.7e-11 44.3 1.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|15679812|ref|NP_276930.1| - 2.5e-09 37.6 1.6 4.3e-09 36.9 1.6 1.4 1 1 0 1 1 1 1 Rubrerythrin COQ7 PF03232.13 gi|15679812|ref|NP_276930.1| - 7.3e-07 29.1 0.2 0.0037 17.0 0.0 2.2 1 1 0 2 2 2 2 Ubiquinone biosynthesis protein COQ7 Ferritin-like PF12902.7 gi|15679812|ref|NP_276930.1| - 9.8e-05 22.3 0.0 0.0002 21.3 0.0 1.5 1 1 0 1 1 1 1 Ferritin-like Mn_catalase PF05067.12 gi|15679812|ref|NP_276930.1| - 0.0071 15.3 1.3 0.69 8.8 0.2 2.0 1 1 1 2 2 2 2 Manganese containing catalase DUF2383 PF09537.10 gi|15679812|ref|NP_276930.1| - 0.03 14.7 0.1 0.1 12.9 0.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2383) FA_desaturase_2 PF03405.14 gi|15679812|ref|NP_276930.1| - 0.054 12.3 0.5 2.8 6.7 0.0 2.1 2 0 0 2 2 2 0 Fatty acid desaturase Ferritin_2 PF13668.6 gi|15679812|ref|NP_276930.1| - 0.094 12.9 0.0 0.26 11.5 0.0 1.7 1 1 0 1 1 1 0 Ferritin-like domain YnfE PF17452.2 gi|15679812|ref|NP_276930.1| - 0.14 12.4 1.7 0.35 11.2 1.7 1.6 1 0 0 1 1 1 0 Uncharacterized YnfE-like Beta_helix PF13229.6 gi|15679813|ref|NP_276931.1| - 3.5e-08 33.4 56.0 7.9e-06 25.8 25.0 3.6 1 1 1 3 3 3 3 Right handed beta helix region Glyco_hydro2_C5 PF18565.1 gi|15679813|ref|NP_276931.1| - 0.032 14.1 0.3 0.17 11.7 0.0 2.3 2 0 0 2 2 2 0 Glycoside hydrolase family 2 C-terminal domain 5 DUF362 PF04015.12 gi|15679814|ref|NP_276932.1| - 1.2e-40 140.0 0.3 1.4e-40 139.7 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|15679814|ref|NP_276932.1| - 6.7e-10 38.4 17.7 7.1e-05 22.5 5.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679814|ref|NP_276932.1| - 1.3e-06 28.4 24.3 0.0001 22.3 13.8 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679814|ref|NP_276932.1| - 1.4e-06 28.4 10.9 2.7e-06 27.4 10.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679814|ref|NP_276932.1| - 2.1e-06 28.2 12.1 4.3e-06 27.2 12.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15679814|ref|NP_276932.1| - 2.6e-06 27.8 4.4 0.017 15.6 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679814|ref|NP_276932.1| - 1.5e-05 25.2 8.0 2.8e-05 24.3 8.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679814|ref|NP_276932.1| - 0.00012 22.9 9.8 0.014 16.4 2.8 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15679814|ref|NP_276932.1| - 0.00021 21.6 11.1 0.0096 16.4 1.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15679814|ref|NP_276932.1| - 0.00025 21.1 13.3 0.033 14.3 1.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15679814|ref|NP_276932.1| - 0.00081 19.3 13.5 0.018 15.1 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679814|ref|NP_276932.1| - 0.0012 18.8 16.5 0.076 13.1 4.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15679814|ref|NP_276932.1| - 0.025 15.1 2.5 0.025 15.1 2.5 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|15679814|ref|NP_276932.1| - 0.065 13.8 16.5 0.75 10.4 4.1 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679814|ref|NP_276932.1| - 6.6 7.9 18.4 5.8 8.1 5.0 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15679814|ref|NP_276932.1| - 7.1 7.4 13.3 3.3 8.5 2.2 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain NadA PF02445.16 gi|15679815|ref|NP_276933.1| - 1.8e-106 355.6 0.5 2.1e-106 355.5 0.5 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein XPG_I PF00867.18 gi|15679815|ref|NP_276933.1| - 0.043 14.2 0.2 0.12 12.7 0.1 1.9 2 0 0 2 2 2 0 XPG I-region Robl_LC7 PF03259.17 gi|15679816|ref|NP_276934.1| - 0.029 14.2 0.1 0.11 12.3 0.1 2.0 2 0 0 2 2 2 0 Roadblock/LC7 domain LAMTOR5 PF16672.5 gi|15679816|ref|NP_276934.1| - 0.18 11.8 0.0 0.31 11.0 0.0 1.5 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 Sortase PF04203.13 gi|15679817|ref|NP_276935.1| - 1.1e-14 54.3 0.0 1.5e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Sortase domain Hint_2 PF13403.6 gi|15679817|ref|NP_276935.1| - 0.023 15.0 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 Hint domain MS_channel PF00924.18 gi|15679818|ref|NP_276936.1| - 2.8e-57 193.6 0.1 2.8e-57 193.6 0.1 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF3149 PF11346.8 gi|15679818|ref|NP_276936.1| - 2.8 7.6 5.6 0.67 9.6 1.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) Flp1_like PF16982.5 gi|15679818|ref|NP_276936.1| - 3.6 7.1 7.9 10 5.6 7.9 1.8 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain Lactamase_B_2 PF12706.7 gi|15679819|ref|NP_276937.1| - 4.5e-20 72.0 0.0 9.7e-09 35.0 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15679819|ref|NP_276937.1| - 1.2e-13 51.5 0.6 9e-13 48.7 0.1 2.3 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|15679819|ref|NP_276937.1| - 1.1e-09 37.8 0.0 2e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease QRPTase_C PF01729.19 gi|15679820|ref|NP_276938.1| - 6.4e-66 221.3 0.4 8.7e-66 220.9 0.4 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|15679820|ref|NP_276938.1| - 8.7e-25 86.6 0.2 1.8e-24 85.6 0.2 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.17 gi|15679820|ref|NP_276938.1| - 0.015 14.7 0.0 0.038 13.3 0.0 1.6 1 1 0 1 1 1 0 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 gi|15679820|ref|NP_276938.1| - 0.017 14.5 0.3 0.21 10.9 0.0 2.2 1 1 1 2 2 2 0 Ribulose-phosphate 3 epimerase family DpnD-PcfM PF14207.6 gi|15679820|ref|NP_276938.1| - 0.088 12.7 0.7 1.1 9.2 0.3 2.7 2 0 0 2 2 2 0 DpnD/PcfM-like protein CBFD_NFYB_HMF PF00808.23 gi|15679821|ref|NP_276939.1| - 0.00072 19.8 0.2 0.0028 17.9 0.1 2.0 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TUG-UBL1 PF11470.8 gi|15679821|ref|NP_276939.1| - 0.035 14.3 0.0 0.057 13.7 0.0 1.4 1 0 0 1 1 1 0 TUG ubiquitin-like domain DUF1397 PF07165.11 gi|15679821|ref|NP_276939.1| - 0.061 12.7 2.1 0.15 11.4 1.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1397) MCC-bdg_PDZ PF10506.9 gi|15679821|ref|NP_276939.1| - 0.069 13.2 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome HALZ PF02183.18 gi|15679821|ref|NP_276939.1| - 0.091 13.0 1.1 1.7 8.9 1.3 2.8 1 1 1 2 2 2 0 Homeobox associated leucine zipper zf-C4H2 PF10146.9 gi|15679821|ref|NP_276939.1| - 7.8 6.7 9.1 0.63 10.3 1.0 2.0 1 1 1 2 2 2 0 Zinc finger-containing protein zf-ZPR1 PF03367.13 gi|15679822|ref|NP_276940.1| - 1.2e-37 129.3 0.1 1.4e-37 129.0 0.1 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Lar_restr_allev PF14354.6 gi|15679822|ref|NP_276940.1| - 0.0039 17.5 1.1 0.0072 16.7 1.1 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar DUF2752 PF10825.8 gi|15679822|ref|NP_276940.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2752) 3H PF02829.14 gi|15679823|ref|NP_276941.1| - 4.2e-23 81.4 0.0 9.4e-23 80.3 0.0 1.6 1 0 0 1 1 1 1 3H domain AAA_18 PF13238.6 gi|15679823|ref|NP_276941.1| - 3.1e-06 27.8 0.6 3.6e-05 24.3 0.1 2.7 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|15679823|ref|NP_276941.1| - 0.00014 22.3 0.2 0.0014 19.1 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|15679823|ref|NP_276941.1| - 0.0026 17.9 0.2 0.061 13.5 0.0 2.7 3 1 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 gi|15679823|ref|NP_276941.1| - 0.0043 16.4 0.1 0.042 13.1 0.0 2.3 2 1 0 2 2 2 1 Zeta toxin AAA_28 PF13521.6 gi|15679823|ref|NP_276941.1| - 0.013 15.8 0.1 0.15 12.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|15679823|ref|NP_276941.1| - 0.024 15.0 0.0 0.053 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|15679823|ref|NP_276941.1| - 0.027 14.7 0.0 0.92 9.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain Cytidylate_kin PF02224.18 gi|15679823|ref|NP_276941.1| - 0.056 13.2 0.1 0.13 12.0 0.1 1.8 1 1 0 1 1 1 0 Cytidylate kinase CBS PF00571.28 gi|15679823|ref|NP_276941.1| - 0.06 13.8 0.5 5.8 7.5 0.0 3.5 3 0 0 3 3 3 0 CBS domain RNA_helicase PF00910.22 gi|15679823|ref|NP_276941.1| - 0.082 13.3 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase IPT PF01745.16 gi|15679823|ref|NP_276941.1| - 0.13 11.7 0.3 24 4.2 0.2 3.3 2 1 0 2 2 2 0 Isopentenyl transferase AAA_26 PF13500.6 gi|15679823|ref|NP_276941.1| - 0.15 11.9 0.0 0.35 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|15679823|ref|NP_276941.1| - 0.17 11.4 0.0 1.2 8.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain Robl_LC7 PF03259.17 gi|15679824|ref|NP_276942.1| - 2e-19 69.1 0.2 2.5e-19 68.8 0.2 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF1611 PF07755.11 gi|15679825|ref|NP_276943.1| - 2.9e-61 206.2 0.0 4.2e-61 205.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain DUF1611_N PF17396.2 gi|15679825|ref|NP_276943.1| - 1.4e-14 54.1 0.0 7.3e-14 51.8 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain CoA_binding PF02629.19 gi|15679825|ref|NP_276943.1| - 0.0091 16.7 0.1 0.039 14.6 0.0 2.1 2 0 0 2 2 2 1 CoA binding domain SepF PF04472.12 gi|15679826|ref|NP_276944.1| - 9.2e-08 32.3 0.2 1.4e-07 31.7 0.2 1.3 1 0 0 1 1 1 1 Cell division protein SepF DUF2226 PF09987.9 gi|15679827|ref|NP_276945.1| - 5.9e-11 42.2 15.3 1.3e-10 41.1 15.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2226) DUF4388 PF14332.6 gi|15679827|ref|NP_276945.1| - 0.00012 22.2 0.0 0.00022 21.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4388) ParA PF10609.9 gi|15679828|ref|NP_276946.1| - 3.3e-26 92.3 6.7 2.9e-25 89.1 6.7 2.3 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|15679828|ref|NP_276946.1| - 1.2e-25 90.0 0.4 1.7e-25 89.5 0.4 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15679828|ref|NP_276946.1| - 1.9e-20 73.5 0.2 3.5e-20 72.7 0.1 1.5 1 1 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|15679828|ref|NP_276946.1| - 1.2e-13 51.1 0.0 1.5e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|15679828|ref|NP_276946.1| - 1.1e-12 48.0 1.7 6.3e-12 45.5 1.7 1.9 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|15679828|ref|NP_276946.1| - 9.3e-09 34.9 3.5 5.7e-08 32.3 0.6 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|15679828|ref|NP_276946.1| - 1e-07 31.6 3.8 7.9e-07 28.6 3.8 2.2 1 1 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.6 gi|15679828|ref|NP_276946.1| - 2.3e-07 30.8 8.4 5.1e-06 26.5 8.4 2.4 1 1 0 1 1 1 1 AAA domain VirC1 PF07015.11 gi|15679828|ref|NP_276946.1| - 0.0018 17.6 2.6 0.0019 17.5 0.2 1.9 2 0 0 2 2 2 1 VirC1 protein AAA_30 PF13604.6 gi|15679828|ref|NP_276946.1| - 0.002 17.9 0.4 0.0029 17.4 0.4 1.3 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|15679828|ref|NP_276946.1| - 0.017 15.0 0.2 0.028 14.3 0.2 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CLP1_P PF16575.5 gi|15679828|ref|NP_276946.1| - 0.037 13.8 0.1 0.076 12.8 0.1 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 gi|15679828|ref|NP_276946.1| - 0.044 12.7 2.6 0.071 12.1 2.6 1.5 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|15679828|ref|NP_276946.1| - 0.078 12.5 1.4 0.12 12.0 1.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|15679828|ref|NP_276946.1| - 0.11 12.2 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|15679828|ref|NP_276946.1| - 0.11 12.0 1.1 0.2 11.3 0.3 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain PfkB PF00294.24 gi|15679829|ref|NP_276947.1| - 2e-47 162.0 0.0 2.4e-47 161.7 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase TatD_DNase PF01026.21 gi|15679830|ref|NP_276948.1| - 8.8e-16 58.0 0.0 1.1e-15 57.8 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase PTE PF02126.18 gi|15679830|ref|NP_276948.1| - 0.077 12.4 0.0 0.12 11.7 0.0 1.5 1 1 0 1 1 1 0 Phosphotriesterase family DUF1724 PF08350.10 gi|15679831|ref|NP_276949.1| - 3.4e-21 75.1 0.0 6.8e-21 74.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|15679831|ref|NP_276949.1| - 0.014 15.3 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_5 PF01022.20 gi|15679832|ref|NP_276950.1| - 1.1e-05 25.2 1.4 1.6e-05 24.7 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|15679832|ref|NP_276950.1| - 0.0005 19.9 0.0 0.00093 19.0 0.0 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|15679832|ref|NP_276950.1| - 0.0012 19.3 0.1 0.0023 18.4 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|15679832|ref|NP_276950.1| - 0.0052 16.6 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|15679832|ref|NP_276950.1| - 0.083 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF1724 PF08350.10 gi|15679833|ref|NP_276951.1| - 0.00051 20.1 0.1 0.00059 19.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HGTP_anticodon PF03129.20 gi|15679834|ref|NP_276952.1| - 3.2e-23 81.7 0.1 9e-23 80.3 0.1 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|15679834|ref|NP_276952.1| - 2.2e-10 40.8 0.0 4.5e-10 39.8 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|15679834|ref|NP_276952.1| - 0.047 12.8 0.2 6.2 5.8 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) zf-FPG_IleRS PF06827.14 gi|15679834|ref|NP_276952.1| - 0.17 11.8 0.8 0.38 10.7 0.8 1.6 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS DCD PF06559.11 gi|15679835|ref|NP_276953.1| - 1.4e-16 60.3 0.0 6.4e-10 38.4 0.0 2.1 1 1 0 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|15679835|ref|NP_276953.1| - 3.2e-14 52.7 0.0 4.7e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 dUTPase DUF1512 PF07431.12 gi|15679836|ref|NP_276954.1| - 3e-105 352.1 0.4 3.6e-105 351.9 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) SpoU_methylase PF00588.19 gi|15679837|ref|NP_276955.1| - 3.7e-32 111.4 0.0 5e-32 111.0 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family CCG PF02754.16 gi|15679838|ref|NP_276956.1| - 3.9e-41 139.2 6.1 2.8e-22 78.7 0.0 2.8 3 0 0 3 3 2 2 Cysteine-rich domain Fer2_3 PF13085.6 gi|15679838|ref|NP_276956.1| - 8e-25 87.0 0.0 8e-25 87.0 0.0 2.2 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|15679838|ref|NP_276956.1| - 5.4e-11 42.8 6.3 5.4e-11 42.8 6.3 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer2 PF00111.27 gi|15679838|ref|NP_276956.1| - 1.2e-06 28.3 0.2 1.2e-06 28.3 0.2 3.1 3 0 0 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 gi|15679838|ref|NP_276956.1| - 1.3e-06 28.9 7.2 1.3e-06 28.9 7.2 3.2 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679838|ref|NP_276956.1| - 0.00021 21.5 5.5 0.41 10.9 0.7 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679838|ref|NP_276956.1| - 0.00066 19.8 22.3 0.011 15.8 3.1 3.6 4 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679838|ref|NP_276956.1| - 0.005 17.4 11.6 0.005 17.4 11.6 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679838|ref|NP_276956.1| - 0.0051 17.0 13.8 0.0051 17.0 13.8 3.9 3 1 2 5 5 5 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15679838|ref|NP_276956.1| - 0.032 15.1 3.5 0.032 15.1 3.5 3.7 4 0 0 4 4 3 0 4Fe-4S double cluster binding domain Fer2_4 PF13510.6 gi|15679838|ref|NP_276956.1| - 0.48 10.5 5.3 0.16 12.0 1.8 2.1 2 1 0 2 2 1 0 2Fe-2S iron-sulfur cluster binding domain Fer4_13 PF13370.6 gi|15679838|ref|NP_276956.1| - 0.98 10.0 9.9 8.7 7.0 3.0 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|15679838|ref|NP_276956.1| - 1.4 9.8 12.6 1.3 9.9 1.2 3.8 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15679838|ref|NP_276956.1| - 5.4 7.2 19.8 0.65 10.2 0.2 3.6 4 0 0 4 4 4 0 4Fe-4S dicluster domain TPP_enzyme_C PF02775.21 gi|15679840|ref|NP_276958.1| - 1.1e-26 93.4 0.0 2.1e-26 92.5 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|15679840|ref|NP_276958.1| - 8.5e-14 51.8 0.1 1.2e-13 51.3 0.1 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|15679840|ref|NP_276958.1| - 2.3e-05 24.0 2.6 2.3e-05 24.0 2.6 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679840|ref|NP_276958.1| - 0.00027 20.8 1.5 0.00027 20.8 1.5 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15679840|ref|NP_276958.1| - 0.00028 20.8 17.1 0.00058 19.8 2.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15679840|ref|NP_276958.1| - 0.00054 20.0 10.3 0.007 16.5 10.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain PFOR_II PF17147.4 gi|15679840|ref|NP_276958.1| - 0.00063 20.0 0.0 0.0022 18.3 0.0 1.9 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_9 PF13187.6 gi|15679840|ref|NP_276958.1| - 0.0016 18.5 8.3 0.0049 17.0 8.3 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|15679840|ref|NP_276958.1| - 0.0017 18.0 0.7 0.011 15.3 0.3 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_16 PF13484.6 gi|15679840|ref|NP_276958.1| - 0.04 14.9 2.9 0.04 14.9 2.9 2.4 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15679840|ref|NP_276958.1| - 0.068 13.3 8.3 0.15 12.2 8.3 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679840|ref|NP_276958.1| - 0.14 12.7 12.8 0.42 11.2 8.9 2.7 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15679840|ref|NP_276958.1| - 1.4 9.7 6.9 1.2 9.9 0.4 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain POR PF01558.18 gi|15679841|ref|NP_276959.1| - 8.9e-39 133.4 0.0 1e-38 133.2 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase ACT PF01842.25 gi|15679842|ref|NP_276960.1| - 4.5e-16 58.3 2.2 2.5e-08 33.5 0.2 2.2 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|15679842|ref|NP_276960.1| - 4.1e-07 30.5 0.5 0.0053 17.3 0.1 2.2 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|15679842|ref|NP_276960.1| - 2.4e-05 24.0 0.1 0.46 10.3 0.0 3.1 2 1 1 3 3 3 2 ACT domain Sigma70_r1_1 PF03979.14 gi|15679842|ref|NP_276960.1| - 0.026 14.6 0.5 4.7 7.3 0.1 3.0 3 0 0 3 3 3 0 Sigma-70 factor, region 1.1 Glyoxalase_4 PF13669.6 gi|15679842|ref|NP_276960.1| - 0.14 12.4 0.0 0.33 11.2 0.0 1.9 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMP-binding_C_2 PF14535.6 gi|15679843|ref|NP_276961.1| - 8.6e-33 112.5 1.2 1.6e-32 111.7 0.3 2.0 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15679843|ref|NP_276961.1| - 2.4e-14 52.8 2.3 7.8e-14 51.1 2.3 1.7 1 1 0 1 1 1 1 AMP-binding enzyme SSF PF00474.17 gi|15679844|ref|NP_276962.1| - 3e-60 204.2 42.0 3.8e-60 203.9 42.0 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family FixP_N PF14715.6 gi|15679845|ref|NP_276963.1| - 0.24 11.1 2.7 0.32 10.8 2.7 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP ABC2_membrane_3 PF12698.7 gi|15679846|ref|NP_276964.1| - 1.4e-29 103.4 13.2 1.6e-15 57.0 10.2 2.2 2 0 0 2 2 2 2 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|15679846|ref|NP_276964.1| - 7.5e-07 28.8 17.6 7.5e-07 28.8 17.6 1.9 2 0 0 2 2 2 1 ABC-2 type transporter DUF1664 PF07889.12 gi|15679846|ref|NP_276964.1| - 0.0024 17.9 1.5 0.9 9.6 0.2 3.4 1 1 2 3 3 3 1 Protein of unknown function (DUF1664) FliJ PF02050.16 gi|15679846|ref|NP_276964.1| - 0.012 15.9 0.0 13 6.1 0.0 3.1 4 0 0 4 4 4 0 Flagellar FliJ protein KorB PF08535.10 gi|15679846|ref|NP_276964.1| - 0.026 14.6 0.3 2.1 8.4 0.1 2.7 2 0 0 2 2 2 0 KorB domain Spc7 PF08317.11 gi|15679846|ref|NP_276964.1| - 0.031 13.2 1.4 1.1 8.1 0.5 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Laminin_II PF06009.12 gi|15679846|ref|NP_276964.1| - 0.04 13.9 4.6 2.1 8.3 0.2 2.7 1 1 1 3 3 3 0 Laminin Domain II TPR_MLP1_2 PF07926.12 gi|15679846|ref|NP_276964.1| - 0.18 11.9 0.8 21 5.2 0.0 2.7 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein AAA_13 PF13166.6 gi|15679846|ref|NP_276964.1| - 0.22 10.1 2.5 0.32 9.6 2.5 1.1 1 0 0 1 1 1 0 AAA domain KxDL PF10241.9 gi|15679846|ref|NP_276964.1| - 0.29 11.5 1.1 7.9 6.8 0.0 2.8 3 0 0 3 3 3 0 Uncharacterized conserved protein EzrA PF06160.12 gi|15679846|ref|NP_276964.1| - 0.33 9.1 2.7 3.9 5.5 0.3 2.1 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Vps51 PF08700.11 gi|15679846|ref|NP_276964.1| - 1.3 9.2 4.1 22 5.2 0.1 3.7 4 0 0 4 4 4 0 Vps51/Vps67 PRC PF05239.16 gi|15679847|ref|NP_276965.1| - 1.7e-13 50.4 3.5 1.9e-13 50.3 3.5 1.0 1 0 0 1 1 1 1 PRC-barrel domain Pribosyltran PF00156.27 gi|15679848|ref|NP_276966.1| - 5.4e-14 52.0 2.0 7.6e-14 51.5 2.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PDZ_6 PF17820.1 gi|15679848|ref|NP_276966.1| - 0.13 12.1 1.2 0.2 11.5 0.3 1.7 2 0 0 2 2 2 0 PDZ domain MoCF_biosynth PF00994.24 gi|15679849|ref|NP_276967.1| - 6.5e-35 119.9 0.1 7.5e-35 119.7 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain PIN_6 PF17146.4 gi|15679850|ref|NP_276968.1| - 3.8e-16 59.3 0.0 6.3e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease ADK_lid PF05191.14 gi|15679850|ref|NP_276968.1| - 1.6 8.8 5.4 4.4 7.4 5.4 1.8 1 1 0 1 1 1 0 Adenylate kinase, active site lid DUF2117 PF09890.9 gi|15679851|ref|NP_276969.1| - 1.1e-78 263.5 0.0 1.4e-78 263.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.21 gi|15679851|ref|NP_276969.1| - 0.00063 19.0 0.0 0.001 18.3 0.0 1.2 1 0 0 1 1 1 1 ATP-NAD kinase OSR1_C PF12202.8 gi|15679851|ref|NP_276969.1| - 0.054 13.7 0.2 0.15 12.3 0.2 1.7 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain AIRS_C PF02769.22 gi|15679852|ref|NP_276970.1| - 8.4e-18 65.0 0.0 1.2e-17 64.5 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15679852|ref|NP_276970.1| - 1.5e-16 60.8 0.3 2.7e-16 60.0 0.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Fer2_4 PF13510.6 gi|15679853|ref|NP_276971.1| - 0.024 14.7 0.0 0.12 12.4 0.0 2.2 3 0 0 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain DUF871 PF05913.11 gi|15679853|ref|NP_276971.1| - 0.029 13.6 0.1 0.061 12.5 0.0 1.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF871) Myosin_N PF02736.19 gi|15679853|ref|NP_276971.1| - 0.04 13.7 0.6 0.34 10.8 0.0 2.9 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain Ub-Mut7C PF14451.6 gi|15679853|ref|NP_276971.1| - 0.15 11.9 0.2 3 7.7 0.0 2.7 1 1 1 2 2 2 0 Mut7-C ubiquitin DUF2102 PF09875.9 gi|15679854|ref|NP_276972.1| - 2.1e-40 136.6 0.0 2.7e-40 136.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DUF2111 PF09884.9 gi|15679855|ref|NP_276973.1| - 1e-36 124.8 0.3 1.3e-36 124.5 0.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) DUF2112 PF09885.9 gi|15679856|ref|NP_276974.1| - 1.1e-66 223.2 0.0 1.3e-66 223.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) BcrAD_BadFG PF01869.20 gi|15679857|ref|NP_276975.1| - 1.4e-64 218.2 5.4 2e-64 217.7 5.4 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|15679857|ref|NP_276975.1| - 4.4e-05 23.8 1.5 0.21 12.0 0.2 2.8 2 1 0 2 2 2 2 Cell division protein FtsA MutL PF13941.6 gi|15679857|ref|NP_276975.1| - 0.00054 18.7 5.7 0.011 14.3 0.2 3.0 3 0 0 3 3 3 2 MutL protein Hydantoinase_A PF01968.18 gi|15679857|ref|NP_276975.1| - 0.026 13.8 5.3 2.1 7.6 0.2 2.9 2 1 1 3 3 3 0 Hydantoinase/oxoprolinase CGGC PF08821.11 gi|15679857|ref|NP_276975.1| - 0.039 14.1 0.0 0.082 13.1 0.0 1.5 1 0 0 1 1 1 0 CGGC domain DUF460 PF04312.13 gi|15679857|ref|NP_276975.1| - 0.062 13.0 0.0 8.5 6.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF460) Peptidase_M78 PF06114.13 gi|15679857|ref|NP_276975.1| - 0.11 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 IrrE N-terminal-like domain Hydant_A_N PF05378.13 gi|15679857|ref|NP_276975.1| - 0.18 11.5 3.3 0.13 11.9 0.8 2.0 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region DUF2113 PF09886.9 gi|15679858|ref|NP_276976.1| - 4.7e-70 234.7 0.3 5.2e-70 234.6 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) DUF4162 PF13732.6 gi|15679858|ref|NP_276976.1| - 0.063 14.0 0.0 0.21 12.3 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4162) Radical_SAM PF04055.21 gi|15679859|ref|NP_276977.1| - 1.1e-28 100.7 0.3 1.7e-28 100.1 0.3 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15679859|ref|NP_276977.1| - 0.0051 17.1 0.0 0.012 15.8 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15679859|ref|NP_276977.1| - 0.022 14.9 0.0 0.047 13.8 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain Peptidase_C93 PF06035.11 gi|15679859|ref|NP_276977.1| - 0.12 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP IF-2B PF01008.17 gi|15679860|ref|NP_276978.1| - 2.2e-81 273.1 0.0 3.3e-81 272.6 0.0 1.2 1 0 0 1 1 1 1 Initiation factor 2 subunit family Met_10 PF02475.16 gi|15679861|ref|NP_276979.1| - 3.6e-78 261.9 0.1 5.2e-78 261.4 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|15679861|ref|NP_276979.1| - 7.4e-16 57.8 0.3 2.4e-15 56.1 0.2 1.9 2 0 0 2 2 1 1 tRNA methyltransferase 5 N-terminal domain TRM PF02005.16 gi|15679861|ref|NP_276979.1| - 2e-12 47.0 0.1 3.1e-12 46.4 0.1 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase PrmA PF06325.13 gi|15679861|ref|NP_276979.1| - 2.1e-11 43.8 0.0 3.1e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|15679861|ref|NP_276979.1| - 9.6e-09 35.0 0.0 1.9e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 gi|15679861|ref|NP_276979.1| - 1.4e-08 34.5 0.0 2.2e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|15679861|ref|NP_276979.1| - 3.4e-08 34.1 0.1 6.9e-08 33.1 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15679861|ref|NP_276979.1| - 1.2e-06 28.4 0.0 2.1e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|15679861|ref|NP_276979.1| - 9e-06 25.4 0.0 1.7e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|15679861|ref|NP_276979.1| - 9.3e-06 25.6 0.0 1.8e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15679861|ref|NP_276979.1| - 0.00018 22.1 0.0 0.00046 20.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|15679861|ref|NP_276979.1| - 0.00027 20.6 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F UPF0020 PF01170.18 gi|15679861|ref|NP_276979.1| - 0.00075 19.2 0.1 0.006 16.3 0.1 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 gi|15679861|ref|NP_276979.1| - 0.0027 17.5 0.0 0.011 15.5 0.0 2.0 1 1 0 1 1 1 1 DNA methylase Ubie_methyltran PF01209.18 gi|15679861|ref|NP_276979.1| - 0.003 16.9 0.0 0.0059 16.0 0.0 1.5 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltrans_SAM PF10672.9 gi|15679861|ref|NP_276979.1| - 0.0055 15.9 0.0 0.0079 15.4 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_23 PF13489.6 gi|15679861|ref|NP_276979.1| - 0.011 15.6 0.0 0.054 13.3 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain PRMT5 PF05185.16 gi|15679861|ref|NP_276979.1| - 0.023 14.5 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase MethyltransfD12 PF02086.15 gi|15679861|ref|NP_276979.1| - 0.049 13.3 0.0 0.07 12.8 0.0 1.2 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase DNA_methylase PF00145.17 gi|15679861|ref|NP_276979.1| - 0.071 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase tRNA_U5-meth_tr PF05958.11 gi|15679861|ref|NP_276979.1| - 0.12 11.3 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_16 PF10294.9 gi|15679861|ref|NP_276979.1| - 0.22 11.2 0.0 0.32 10.7 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase TP_methylase PF00590.20 gi|15679862|ref|NP_276980.1| - 1.2e-21 77.7 0.1 1.5e-21 77.4 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Fibin PF15819.5 gi|15679863|ref|NP_276981.1| - 0.027 14.2 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Fin bud initiation factor homologue Methyltransf_25 PF13649.6 gi|15679864|ref|NP_276982.1| - 7.5e-14 52.2 0.0 1.1e-13 51.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15679864|ref|NP_276982.1| - 2.8e-13 50.3 0.0 3.8e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15679864|ref|NP_276982.1| - 8.4e-13 48.4 0.0 9.9e-13 48.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15679864|ref|NP_276982.1| - 1.8e-08 34.0 0.0 2.3e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|15679864|ref|NP_276982.1| - 1.2e-07 32.4 0.0 1.8e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|15679864|ref|NP_276982.1| - 6.5e-06 25.8 0.0 9.4e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Fibrillarin PF01269.17 gi|15679864|ref|NP_276982.1| - 0.00016 20.9 0.0 0.00021 20.5 0.0 1.1 1 0 0 1 1 1 1 Fibrillarin Methyltransf_23 PF13489.6 gi|15679864|ref|NP_276982.1| - 0.00019 21.3 0.0 0.00043 20.2 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|15679864|ref|NP_276982.1| - 0.00053 19.3 0.1 0.00066 19.0 0.1 1.1 1 0 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 gi|15679864|ref|NP_276982.1| - 0.0011 18.8 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|15679864|ref|NP_276982.1| - 0.0016 17.8 0.0 0.0019 17.6 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|15679864|ref|NP_276982.1| - 0.0035 16.8 0.1 0.0056 16.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.19 gi|15679864|ref|NP_276982.1| - 0.056 13.5 0.0 0.071 13.2 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_8 PF05148.15 gi|15679864|ref|NP_276982.1| - 0.094 12.5 0.0 0.36 10.6 0.0 1.8 1 1 0 1 1 1 0 Hypothetical methyltransferase TGT PF01702.18 gi|15679865|ref|NP_276983.1| - 1.7e-11 43.9 0.1 3.1e-07 29.9 0.0 2.1 1 1 1 2 2 2 2 Queuine tRNA-ribosyltransferase Fer4_8 PF13183.6 gi|15679866|ref|NP_276984.1| - 1.3e-10 41.6 6.3 1.3e-10 41.6 6.3 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15679866|ref|NP_276984.1| - 3.8e-10 40.2 7.8 7.7e-10 39.2 7.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15679866|ref|NP_276984.1| - 9.2e-09 35.3 8.1 1.7e-08 34.5 8.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15679866|ref|NP_276984.1| - 2.1e-08 34.2 7.5 5.3e-08 32.9 7.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15679866|ref|NP_276984.1| - 9.1e-06 26.2 9.7 4.1e-05 24.1 9.9 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15679866|ref|NP_276984.1| - 0.0026 18.1 12.3 0.0034 17.8 3.1 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.27 gi|15679866|ref|NP_276984.1| - 0.015 15.1 11.4 0.21 11.5 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15679866|ref|NP_276984.1| - 0.068 13.3 12.9 0.67 10.2 3.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Na_trans_assoc PF06512.13 gi|15679866|ref|NP_276984.1| - 0.26 11.5 21.7 0.4 10.9 21.7 1.3 1 0 0 1 1 1 0 Sodium ion transport-associated Fer4_20 PF14691.6 gi|15679866|ref|NP_276984.1| - 0.49 10.2 6.4 1.9 8.3 1.0 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.6 gi|15679866|ref|NP_276984.1| - 0.75 10.0 9.3 3 8.0 9.3 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15679866|ref|NP_276984.1| - 1.1 9.5 8.0 6.5 7.0 1.2 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15679866|ref|NP_276984.1| - 1.4 10.0 17.3 2.2 9.4 4.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Ndc1_Nup PF09531.10 gi|15679866|ref|NP_276984.1| - 3.7 6.1 4.0 4.1 6.0 4.0 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Nop14 PF04147.12 gi|15679866|ref|NP_276984.1| - 3.8 5.6 27.6 5.5 5.1 27.6 1.2 1 0 0 1 1 1 0 Nop14-like family Hamartin PF04388.12 gi|15679866|ref|NP_276984.1| - 6.2 5.4 13.9 7.4 5.1 13.9 1.0 1 0 0 1 1 1 0 Hamartin protein CCG PF02754.16 gi|15679867|ref|NP_276985.1| - 1.2e-43 147.2 2.0 3e-22 78.6 0.1 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Peptidase_C1_2 PF03051.15 gi|15679867|ref|NP_276985.1| - 0.13 11.0 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 Peptidase C1-like family DUF749 PF05370.11 gi|15679868|ref|NP_276986.1| - 1.7e-38 130.5 0.3 1.9e-38 130.4 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF749) SpoIISA_toxin PF14171.6 gi|15679868|ref|NP_276986.1| - 0.022 14.5 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system HEM4 PF02602.15 gi|15679868|ref|NP_276986.1| - 0.069 12.5 0.0 0.075 12.4 0.0 1.1 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD DUF2096 PF09869.9 gi|15679869|ref|NP_276987.1| - 3e-70 235.7 0.1 3.4e-70 235.5 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) PriA_3primeBD PF17764.1 gi|15679869|ref|NP_276987.1| - 0.01 15.7 0.0 0.02 14.8 0.0 1.4 1 0 0 1 1 1 0 3′ DNA-binding domain (3′BD) DUF936 PF06075.12 gi|15679869|ref|NP_276987.1| - 0.16 10.8 0.1 0.2 10.5 0.1 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) Metallophos_2 PF12850.7 gi|15679870|ref|NP_276988.1| - 2.5e-22 79.8 0.0 5e-22 78.8 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|15679870|ref|NP_276988.1| - 1.4e-19 71.4 0.3 1.8e-19 71.0 0.3 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|15679870|ref|NP_276988.1| - 2.1e-18 66.6 0.1 4e-14 52.6 0.1 2.8 1 1 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily Glyco_transf_21 PF13506.6 gi|15679870|ref|NP_276988.1| - 0.011 15.2 0.0 0.019 14.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 ATP-cone PF03477.16 gi|15679871|ref|NP_276989.1| - 6.2e-14 52.3 1.4 2.4e-12 47.3 0.1 3.4 4 0 0 4 4 4 1 ATP cone domain AAA_18 PF13238.6 gi|15679871|ref|NP_276989.1| - 4.8e-06 27.1 0.0 1e-05 26.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|15679871|ref|NP_276989.1| - 0.00064 19.1 0.1 0.06 12.6 0.0 2.8 2 1 1 3 3 3 1 Zeta toxin RsgA_GTPase PF03193.16 gi|15679871|ref|NP_276989.1| - 0.0041 17.0 0.0 0.0089 16.0 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase Cytidylate_kin2 PF13189.6 gi|15679871|ref|NP_276989.1| - 0.029 14.5 0.1 0.056 13.6 0.1 1.5 1 0 0 1 1 1 0 Cytidylate kinase-like family Cytidylate_kin PF02224.18 gi|15679871|ref|NP_276989.1| - 0.044 13.5 0.0 0.13 11.9 0.0 2.0 2 1 0 2 2 2 0 Cytidylate kinase AAA_28 PF13521.6 gi|15679871|ref|NP_276989.1| - 0.17 12.1 1.0 1.2 9.3 0.0 2.7 3 1 0 3 3 3 0 AAA domain CBS PF00571.28 gi|15679872|ref|NP_276990.1| - 8.2e-27 93.4 3.8 5.2e-13 49.2 0.8 2.1 2 0 0 2 2 2 2 CBS domain PHO4 PF01384.20 gi|15679873|ref|NP_276991.1| - 8.6e-69 232.1 32.7 1.9e-68 231.0 32.7 1.5 1 1 0 1 1 1 1 Phosphate transporter family HXXEE PF13787.6 gi|15679874|ref|NP_276992.1| - 0.061 14.1 4.3 0.11 13.3 4.3 1.7 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif TssN PF17555.2 gi|15679874|ref|NP_276992.1| - 0.32 10.3 5.2 2.8 7.3 0.1 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssN Cation_efflux PF01545.21 gi|15679875|ref|NP_276993.1| - 2.3e-42 145.0 4.9 2.7e-42 144.8 4.9 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|15679875|ref|NP_276993.1| - 2.2e-21 75.7 4.3 4.1e-21 74.9 4.3 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF2104 PF09877.9 gi|15679875|ref|NP_276993.1| - 0.021 15.1 2.4 0.21 11.9 0.2 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2104) Aminotran_1_2 PF00155.21 gi|15679876|ref|NP_276994.1| - 9.9e-67 225.6 0.0 1.1e-66 225.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15679876|ref|NP_276994.1| - 6.7e-08 31.9 0.0 1e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|15679876|ref|NP_276994.1| - 1.2e-06 28.1 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|15679876|ref|NP_276994.1| - 5.2e-05 22.0 0.0 7.7e-05 21.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|15679876|ref|NP_276994.1| - 0.017 14.4 0.0 0.033 13.5 0.0 1.4 1 0 0 1 1 1 0 Beta-eliminating lyase DUF1611_N PF17396.2 gi|15679876|ref|NP_276994.1| - 0.023 14.9 0.0 0.16 12.2 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Radical_SAM PF04055.21 gi|15679877|ref|NP_276995.1| - 1.2e-13 51.8 0.0 2.9e-13 50.6 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|15679877|ref|NP_276995.1| - 0.049 13.7 0.0 0.14 12.2 0.0 1.7 2 0 0 2 2 2 0 B12 binding domain CTP_transf_like PF01467.26 gi|15679878|ref|NP_276996.1| - 1.5e-17 64.1 0.0 1.8e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|15679878|ref|NP_276996.1| - 0.014 15.3 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 FAD synthetase NTPase_I-T PF01931.18 gi|15679879|ref|NP_276997.1| - 7.9e-52 175.3 0.0 9.1e-52 175.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 STT3 PF02516.14 gi|15679880|ref|NP_276998.1| - 2e-135 452.5 17.5 2.5e-135 452.2 17.5 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit ANTAR PF03861.14 gi|15679880|ref|NP_276998.1| - 0.0068 16.2 0.0 0.024 14.5 0.0 1.9 2 0 0 2 2 2 1 ANTAR domain DUF1418 PF07214.12 gi|15679883|ref|NP_277001.1| - 0.038 13.9 1.2 0.6 10.0 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) PLDc_2 PF13091.6 gi|15679883|ref|NP_277001.1| - 0.079 12.8 0.2 0.14 12.1 0.2 1.4 1 0 0 1 1 1 0 PLD-like domain Neurensin PF14927.6 gi|15679883|ref|NP_277001.1| - 0.54 10.0 1.8 0.9 9.3 1.8 1.3 1 0 0 1 1 1 0 Neurensin DUF2207 PF09972.9 gi|15679883|ref|NP_277001.1| - 0.73 8.5 4.0 0.39 9.4 2.1 1.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Lactamase_B_3 PF13483.6 gi|15679884|ref|NP_277002.1| - 3.4e-28 98.6 0.0 4.7e-28 98.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|15679884|ref|NP_277002.1| - 2.1e-21 76.4 0.0 3.3e-21 75.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15679884|ref|NP_277002.1| - 1.2e-15 58.1 0.8 1.5e-15 57.7 0.8 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily MMR_HSR1 PF01926.23 gi|15679885|ref|NP_277003.1| - 1.1e-16 61.0 0.0 1.4e-16 60.6 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|15679885|ref|NP_277003.1| - 1.3e-10 41.1 0.3 0.00056 19.5 0.0 3.6 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|15679885|ref|NP_277003.1| - 2.9e-07 30.1 0.1 0.0096 15.4 0.0 2.3 2 0 0 2 2 2 2 ADP-ribosylation factor family Septin PF00735.18 gi|15679885|ref|NP_277003.1| - 2.6e-06 26.9 0.0 3.8e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Septin Roc PF08477.13 gi|15679885|ref|NP_277003.1| - 3.5e-06 27.2 0.1 0.0016 18.7 0.0 2.2 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 gi|15679885|ref|NP_277003.1| - 0.00013 21.5 0.3 0.00084 18.9 0.3 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|15679885|ref|NP_277003.1| - 0.0005 20.0 0.1 0.62 9.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase SRPRB PF09439.10 gi|15679885|ref|NP_277003.1| - 0.0011 18.5 0.1 0.1 12.1 0.0 2.3 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 gi|15679885|ref|NP_277003.1| - 0.0018 18.0 0.0 0.0035 17.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain MMR_HSR1_Xtn PF16897.5 gi|15679885|ref|NP_277003.1| - 0.0029 17.6 0.0 0.0043 17.0 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 gi|15679885|ref|NP_277003.1| - 0.0091 16.1 0.0 1.1 9.3 0.0 2.3 1 1 1 2 2 2 1 Dynamin family RNA_helicase PF00910.22 gi|15679885|ref|NP_277003.1| - 0.0094 16.3 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 RNA helicase Ras PF00071.22 gi|15679885|ref|NP_277003.1| - 0.017 14.7 0.0 4.7 6.8 0.0 2.6 2 1 0 2 2 2 0 Ras family AAA PF00004.29 gi|15679885|ref|NP_277003.1| - 0.026 14.9 0.1 0.065 13.7 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|15679885|ref|NP_277003.1| - 0.029 14.3 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|15679885|ref|NP_277003.1| - 0.13 11.8 0.0 0.38 10.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|15679885|ref|NP_277003.1| - 0.2 11.8 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF2073 PF09846.9 gi|15679886|ref|NP_277004.1| - 3e-35 120.3 2.2 3.5e-35 120.0 2.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) DUF2072 PF09845.9 gi|15679887|ref|NP_277005.1| - 1.3e-19 70.8 5.5 2.1e-09 37.7 0.9 2.0 1 1 1 2 2 2 2 Zn-ribbon containing protein Zn-ribbon_8 PF09723.10 gi|15679887|ref|NP_277005.1| - 0.0061 16.6 0.9 0.011 15.9 0.9 1.4 1 0 0 1 1 1 1 Zinc ribbon domain Prok-RING_1 PF14446.6 gi|15679887|ref|NP_277005.1| - 0.007 16.3 0.3 0.013 15.5 0.3 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 HypA PF01155.19 gi|15679887|ref|NP_277005.1| - 0.0092 16.0 0.8 0.014 15.4 0.8 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2_4 PF13894.6 gi|15679887|ref|NP_277005.1| - 0.0098 16.7 1.7 0.31 12.0 0.1 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 gi|15679887|ref|NP_277005.1| - 0.0098 15.6 0.1 0.0098 15.6 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type DUF4187 PF13821.6 gi|15679887|ref|NP_277005.1| - 0.026 14.3 0.8 0.042 13.6 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) DZR PF12773.7 gi|15679887|ref|NP_277005.1| - 0.04 13.9 1.2 0.058 13.4 1.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon TFIIS_C PF01096.18 gi|15679887|ref|NP_277005.1| - 0.051 13.4 2.0 4.9 7.1 0.2 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-HYPF PF07503.12 gi|15679887|ref|NP_277005.1| - 0.11 12.3 2.1 2.9 7.7 0.3 2.4 2 0 0 2 2 2 0 HypF finger zinc_ribbon_4 PF13717.6 gi|15679887|ref|NP_277005.1| - 0.16 11.9 2.2 11 6.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15679887|ref|NP_277005.1| - 0.18 11.3 3.4 0.56 9.8 0.1 2.8 3 0 0 3 3 3 0 TFIIB zinc-binding DUF1451 PF07295.11 gi|15679887|ref|NP_277005.1| - 0.19 11.8 0.7 0.25 11.4 0.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf_UBZ PF18439.1 gi|15679887|ref|NP_277005.1| - 0.48 10.1 2.5 4.6 6.9 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|15679887|ref|NP_277005.1| - 1.1 8.8 5.0 8.5 5.9 5.0 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15679887|ref|NP_277005.1| - 1.7 8.5 6.5 12 5.8 1.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain STT3 PF02516.14 gi|15679888|ref|NP_277006.1| - 4.6e-148 494.2 23.4 5.7e-148 493.9 23.4 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF3488 PF11992.8 gi|15679888|ref|NP_277006.1| - 0.047 12.6 23.7 0.027 13.4 12.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) TRAP-gamma PF07074.12 gi|15679888|ref|NP_277006.1| - 2.9 7.4 6.0 0.62 9.6 1.3 2.3 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) FbpA PF05833.11 gi|15679889|ref|NP_277007.1| - 1e-101 341.0 0.3 1.3e-101 340.6 0.3 1.0 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|15679889|ref|NP_277007.1| - 2.2e-29 102.3 0.0 4.2e-29 101.4 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain H2TH PF06831.14 gi|15679889|ref|NP_277007.1| - 0.025 14.6 0.1 0.15 12.1 0.0 2.2 2 0 0 2 2 2 0 Formamidopyrimidine-DNA glycosylase H2TH domain Med9 PF07544.13 gi|15679889|ref|NP_277007.1| - 0.068 13.3 8.0 0.5 10.5 1.2 2.4 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Atg14 PF10186.9 gi|15679889|ref|NP_277007.1| - 3.4 6.7 5.4 0.93 8.5 0.2 2.0 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mei5_like PF17021.5 gi|15679889|ref|NP_277007.1| - 5 7.2 6.7 8 6.5 1.3 2.4 2 0 0 2 2 2 0 Putative double-strand recombination repair-like DUF5379 PF17350.2 gi|15679890|ref|NP_277008.1| - 7.1e-10 39.0 6.9 9.1e-10 38.7 6.9 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5379) DUF2070 PF09843.9 gi|15679891|ref|NP_277009.1| - 1.6e-184 614.4 14.2 1.8e-184 614.2 14.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Fumerase_C PF05683.12 gi|15679892|ref|NP_277010.1| - 4.2e-40 137.3 0.0 7.4e-40 136.5 0.0 1.3 1 1 0 1 1 1 1 Fumarase C-terminus PTE PF02126.18 gi|15679893|ref|NP_277011.1| - 0.0061 16.0 0.0 0.013 14.9 0.0 1.6 1 0 0 1 1 1 1 Phosphotriesterase family NAD_binding_10 PF13460.6 gi|15679893|ref|NP_277011.1| - 0.029 14.3 0.0 0.24 11.3 0.0 2.1 1 1 1 2 2 2 0 NAD(P)H-binding NYN PF01936.18 gi|15679895|ref|NP_277013.1| - 1.5e-21 77.4 0.1 1.9e-21 77.1 0.1 1.1 1 0 0 1 1 1 1 NYN domain CoA_binding_2 PF13380.6 gi|15679895|ref|NP_277013.1| - 0.078 13.5 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 CoA binding domain SelA PF03841.13 gi|15679896|ref|NP_277014.1| - 9.3e-07 28.2 0.0 1.3e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 gi|15679896|ref|NP_277014.1| - 0.00011 21.3 0.0 0.00019 20.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|15679896|ref|NP_277014.1| - 0.0012 17.5 0.0 0.0027 16.3 0.0 1.6 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|15679896|ref|NP_277014.1| - 0.0061 15.9 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase SHMT PF00464.19 gi|15679896|ref|NP_277014.1| - 0.064 11.8 0.0 0.4 9.2 0.0 1.9 2 0 0 2 2 2 0 Serine hydroxymethyltransferase RTC PF01137.21 gi|15679897|ref|NP_277015.1| - 3.3e-77 258.7 0.1 3.7e-77 258.5 0.1 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|15679897|ref|NP_277015.1| - 3.6e-21 75.6 0.2 8.1e-21 74.5 0.2 1.6 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain SprB PF13573.6 gi|15679897|ref|NP_277015.1| - 0.056 13.2 0.5 0.11 12.2 0.1 1.8 2 0 0 2 2 2 0 SprB repeat BPL_LplA_LipB PF03099.19 gi|15679898|ref|NP_277016.1| - 1.5e-19 70.2 0.0 2.5e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 gi|15679898|ref|NP_277016.1| - 3.1e-12 46.2 1.1 3.1e-12 46.2 1.1 1.9 2 0 0 2 2 2 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 gi|15679898|ref|NP_277016.1| - 6.5e-08 32.3 0.0 2.6e-07 30.3 0.0 1.7 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family CPSase_L_D2 PF02786.17 gi|15679899|ref|NP_277017.1| - 1.1e-82 276.6 0.1 1.9e-82 275.9 0.1 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|15679899|ref|NP_277017.1| - 1e-43 148.4 0.0 2.8e-43 147.0 0.0 1.8 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|15679899|ref|NP_277017.1| - 8.1e-43 144.9 0.0 2e-42 143.6 0.0 1.7 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|15679899|ref|NP_277017.1| - 2.5e-11 43.5 0.0 5.4e-11 42.4 0.0 1.5 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|15679899|ref|NP_277017.1| - 1e-06 28.9 0.0 2.2e-06 27.8 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|15679899|ref|NP_277017.1| - 4.6e-05 23.1 0.0 0.00043 19.9 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.19 gi|15679899|ref|NP_277017.1| - 0.00021 21.1 0.0 0.00037 20.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|15679899|ref|NP_277017.1| - 0.0006 19.4 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|15679899|ref|NP_277017.1| - 0.0019 17.7 0.0 0.004 16.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|15679899|ref|NP_277017.1| - 0.036 13.8 0.0 0.088 12.5 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon Oxidored_nitro PF00148.19 gi|15679899|ref|NP_277017.1| - 0.094 11.4 0.0 1 8.0 0.0 2.1 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase ATPgrasp_ST PF14397.6 gi|15679899|ref|NP_277017.1| - 0.1 11.8 0.0 0.23 10.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|15679899|ref|NP_277017.1| - 0.12 12.0 0.0 0.65 9.6 0.0 2.2 2 1 1 3 3 3 0 ATP-grasp domain MTS PF05175.14 gi|15679900|ref|NP_277018.1| - 4.7e-13 49.0 0.0 6.3e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|15679900|ref|NP_277018.1| - 2.3e-10 40.4 0.6 2.8e-10 40.1 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|15679900|ref|NP_277018.1| - 4.4e-10 40.1 0.1 7.6e-10 39.4 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15679900|ref|NP_277018.1| - 6.4e-09 35.8 0.0 9.1e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|15679900|ref|NP_277018.1| - 6.2e-07 29.3 0.6 3e-06 27.1 0.6 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|15679900|ref|NP_277018.1| - 1.2e-05 25.9 0.0 2.2e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|15679900|ref|NP_277018.1| - 2.6e-05 23.9 0.0 3.7e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_32 PF13679.6 gi|15679900|ref|NP_277018.1| - 0.0005 20.1 0.0 0.00063 19.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15679900|ref|NP_277018.1| - 0.004 16.5 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|15679900|ref|NP_277018.1| - 0.0063 17.2 0.0 0.01 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|15679900|ref|NP_277018.1| - 0.026 14.3 0.2 0.038 13.7 0.2 1.2 1 0 0 1 1 1 0 Lysine methyltransferase FmrO PF07091.11 gi|15679900|ref|NP_277018.1| - 0.051 13.1 0.1 0.081 12.5 0.0 1.3 1 1 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Methyltransf_18 PF12847.7 gi|15679900|ref|NP_277018.1| - 0.055 13.4 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain N6_Mtase PF02384.16 gi|15679900|ref|NP_277018.1| - 0.078 12.2 0.0 0.36 10.0 0.0 1.8 2 0 0 2 2 2 0 N-6 DNA Methylase Methyltransf_23 PF13489.6 gi|15679900|ref|NP_277018.1| - 0.14 12.0 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 gi|15679900|ref|NP_277018.1| - 0.15 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase GidB PF02527.15 gi|15679900|ref|NP_277018.1| - 0.2 10.9 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanothermobacter_thermautotrophicus_Delta_H_uid57877/NC_000916.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanothermobacter_thermautotrophicus_Delta_H_uid57877/NC_000916.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanothermobacter_thermautotrophicus_Delta_H_uid57877/NC_000916.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanothermobacter_thermautotrophicus_Delta_H_uid57877/NC_000916.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:05:40 2019 # [ok]